Citrus Sinensis ID: 009673

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------53
Protein Sequence
MQACSGAAVMGSLQQPIWVKGPRLPSEGSVMVGFPNQIRLNMVKPCRCSSIEGSLVTGRPPSSVSVPIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV
Secondary Structure (PSIPRED)
cccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccEEEcccccccHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHccccEEEcccccccccccccccccccccEEEEEccEEEccccccccccccHHHHHHHHHHHcccEEEEccccccccccHHHHHHHHHHHccEEEEHHHHHHHHHHccccccccccccEEccccccccccccccEEEEEccccccHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccEEEEEEcccccccHHHHHHHHHHcccccccccccccccccccccccccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHccccccEEEcccccccccccEcccccccEcccccccccccccHHHHccccccccccccccccccHHHHHcccHHHHcHHHHHHHHHHHHHHHHcEEcccccccccHHHHHHHccHHHHccccEEccEEcccccHHHHHHHHHHHHHHHHHHcccHHHcccEcccccHHHHHHHHHHHHcccccEEEEEcHHHcccHHHccHHHcccccHHHHHcEEEEEcEccccccEcHHHHHHHHHHHcccEEEEccccccccccHHHHHHHHHHHccEEEEEccccHHHHHccccccccccccEEEEEccccccccccEEEEEcccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccEEHHHcccccEEEEEcHHHcccHHHHHHHHHHccEEcEEcccccccccccccEEEEEcHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
mqacsgaavmgslqqpiwvkgprlpsegsvmvgfpnqirlnmvkpcrcssiegslvtgrppssvsvpipeiggdgssfvdyslgeadpeVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCltnkyseglpgkryyggneyIDELETLCQKRALAAFnldenkwgvnvqplsgspanfEVYTAILkphdrimgldlphgghlshgfmtpkrrvsgtsiyfesmpyrldestglvdydmLEKTAILFRPKliiagasayprdfdyprMRQIADAVGALLMMDMAHISGLVAAsvvadpfkycdvvtttthkslrgprggmiffkkdpvlgVELESainnavfpglqggphnhtiGGLAVCLkhaqspefkvyqNKVVSNCRALASRLVELGYKlvsggsdnhlvlvdlrpmgidgaRVEKILDMASITlnknsvpgdksalvpggirigspamttrgfseKEFVAIADFIHEGVEITLEAKKLVQgsklqdfmnfvtspnfslmNNVADLRGRVEalttqfpipgv
Flexible Loop (DISEMBL)
MQACSGAAVMGSLQQPIWVKGPRLPSEGSVMVGFPNQIRLNMVKPCRCSSIegslvtgrppssVSVPIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCltnkyseglpgkRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAsayprdfdyprMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTtthkslrgprggmiFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVsggsdnhlvlVDLRPMGIDGARVEKILDMASItlnknsvpgdksalvpGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEalttqfpipgv
Low Complexity Region (SEG)
MQACSGAAVMGSLQQPIWVKGPRLPSEGSVMVGFPNQIRLNMVKPCRCSSIEGSLVTGRppssvsvpIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV
Disordered region (IsUnstruct)
************LQQPIWVKGPRLPSEGSVMVGFPNQIRLNMVKPCRCSSIEGSLV********************SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSV*****ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALT********
Disordered Region (DISOPRED)
******************************************************************************VDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTS**FSLMNNVADLRGRVEALTTQFPIPGV
Disordered Region (DISEMBL)
*********MGSLQQPIWVKGPRLPSEGSVMVGFPNQIRLNMVKPCRCSSIEGSLVTGRPPSSVSVPIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV
Disordered Region (DISPRO)
***********SLQQPIWVKGPRLPSEGSVMVGFPNQIRLNMVKPCRCSSIEGSLVT****************DGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQACSGAAVMGSLQQPIWVKGPRLPSEGSVMVGFPNQIRLNMVKPCRCSSIEGSLVTGRPPSSVSVPIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	529	2.2.26 [Sep-21-2011]
Q9SZJ5	517	Serine hydroxymethyltrans	no	no	0.892	0.912	0.591	1e-171
P50433	518	Serine hydroxymethyltrans	N/A	no	0.833	0.851	0.624	1e-168
P34899	518	Serine hydroxymethyltrans	N/A	no	0.833	0.851	0.615	1e-168
P49358	517	Serine hydroxymethyltrans	N/A	no	0.829	0.849	0.623	1e-165
P49357	517	Serine hydroxymethyltrans	N/A	no	0.831	0.851	0.611	1e-164
P34897	504	Serine hydroxymethyltrans	yes	no	0.839	0.880	0.600	1e-162
Q5E9P9	484	Serine hydroxymethyltrans	yes	no	0.843	0.921	0.606	1e-162
P14519	504	Serine hydroxymethyltrans	yes	no	0.837	0.878	0.603	1e-162
Q3SZ20	504	Serine hydroxymethyltrans	no	no	0.837	0.878	0.599	1e-161
P35623	484	Serine hydroxymethyltrans	N/A	no	0.843	0.921	0.606	1e-161

>sp|Q9SZJ5|GLYM_ARATH Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis thaliana GN=SHM1 PE=1 SV=1

 Score =  601 bits (1549), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 291/492 (59%), Positives = 361/492 (73%), Gaps = 20/492 (4%)

Query: 46  CRCSSIEGSLVTGRPPSSVSVPIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSL 105
           C  SS+    V  +  S V+ P           ++  L E DPE+ +II  EK RQ+K L
Sbjct: 27  CYMSSLPSEAVDEKERSRVTWP---------KQLNAPLEEVDPEIADIIEHEKARQWKGL 77

Query: 106 ELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE 165
           ELI SENFTS +VM+AVGS +TNKYSEG PG RYYGGNEYID  ETLCQKRAL AF LD 
Sbjct: 78  ELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDP 137

Query: 166 NKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225
            KWGVNVQPLSGSPANF VYTA+LKPH+RIM LDLPHGGHLSHG+ T  +++S  SI+FE
Sbjct: 138 EKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 197

Query: 226 SMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 285
           +MPYRLDESTG +DYD +EK+A LFRPKLI+AGASAY R +DY R+R++ +   A+++ D
Sbjct: 198 TMPYRLDESTGYIDYDQMEKSATLFRPKLIVAGASAYARLYDYARIRKVCNKQKAVMLAD 257

Query: 286 MAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKK---------DPVLGVEL 336
           MAHISGLVAA+V+  PF Y DVVTTTTHKSLRGPRG MIFF+K           VL  + 
Sbjct: 258 MAHISGLVAANVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVL-YDF 316

Query: 337 ESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK 396
           E  IN AVFPGLQGGPHNHTI GLAV LK A + E+K YQ +V+SN    A  L+E GY+
Sbjct: 317 EDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKAYQEQVLSNSAKFAQTLMERGYE 376

Query: 397 LVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAM 456
           LVSGG+DNHLVLV+L+P GIDG+RVEK+L+   I  NKN+VPGD SA+VPGGIR+G+PA+
Sbjct: 377 LVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNTVPGDVSAMVPGGIRMGTPAL 436

Query: 457 TTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGR 516
           T+RGF E++F  +A++  + V I L+ K   QG+KL+DF++ + S + ++ + +A LR  
Sbjct: 437 TSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKDFVSAMESSS-TIQSEIAKLRHE 495

Query: 517 VEALTTQFPIPG 528
           VE    QFP  G
Sbjct: 496 VEEFAKQFPTIG 507

Interconversion of serine and glycine.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 1EC: .EC: 2EC: .EC: 1

>sp|P50433|GLYM_SOLTU Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum PE=2 SV=1

 Score =  592 bits (1525), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 281/450 (62%), Positives = 344/450 (76%), Gaps = 9/450 (2%)

Query: 87  DPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYI 146
           DPE+ +II  EK RQ+K LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGGNEYI
Sbjct: 60  DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 119

Query: 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHL 206
           D  ETLCQKRAL AF LD  KWGVNVQPLSGSPANF+VYTA+LKPH+RIM LDLPHGGHL
Sbjct: 120 DMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFQVYTALLKPHERIMALDLPHGGHL 179

Query: 207 SHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDF 266
           SHG+ T  +++S  SI+FE+MPYRLDESTG +DYD LEK+A LFRPKLI+AGASAY R +
Sbjct: 180 SHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 239

Query: 267 DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFF 326
           DY R+R++ +   A+L+ DMAHISGLVAA V+  PF Y DVVTTTTHKSLRGPRG MIF+
Sbjct: 240 DYDRIRKVCNKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFY 299

Query: 327 KK--------DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378
           +K           +  + E  IN AVFPGLQGGPHNHTI GLAV LK A +PE++ YQ +
Sbjct: 300 RKGVKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQ 359

Query: 379 VVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVP 438
           V+SN    A  L E GY+LVSGG+DNHLVLV+++  GIDG+RVEK+L+   I  NKN+VP
Sbjct: 360 VLSNSSKFAQALGEKGYELVSGGTDNHLVLVNMKNKGIDGSRVEKVLEAVHIAANKNTVP 419

Query: 439 GDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNF 498
           GD SA+VPGGIR+G+PA+T+RGF E++FV +ADF    V+I ++ K   QG+KL+DF+  
Sbjct: 420 GDVSAMVPGGIRMGTPALTSRGFLEEDFVKVADFFDAAVKIAVKVKAETQGTKLKDFVAT 479

Query: 499 VTSPNFSLMNNVADLRGRVEALTTQFPIPG 528
           + S +  + + +A LR  VE    QFP  G
Sbjct: 480 LES-SAPIKSEIAKLRHDVEEYAKQFPTIG 508

Interconversion of serine and glycine.

Solanum tuberosum (taxid: 4113)

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 1

>sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum PE=1 SV=1

 Score =  590 bits (1522), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 277/450 (61%), Positives = 344/450 (76%), Gaps = 9/450 (2%)

Query: 87  DPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYI 146
           DPE+ +II  EK RQ+K LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGGNEYI
Sbjct: 60  DPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 119

Query: 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHL 206
           D  ETLCQKRAL AF LD  KWGVNVQPLSGSP+NF+VYTA+LKPHDRIM LDLPHGGHL
Sbjct: 120 DMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 179

Query: 207 SHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDF 266
           SHG+ T  +++S  SI+FE+MPYRLDESTG +DYD LEK+A LFRPKLI+AGASAY R +
Sbjct: 180 SHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 239

Query: 267 DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFF 326
           DY R+R++ D   A+L+ DMAHISGLVAA V+  PF Y DVVTTTTHKSLRGPRG MIFF
Sbjct: 240 DYARIRKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFF 299

Query: 327 KK--------DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378
           +K           +  + E  IN AVFPGLQGGPHNHTI GLAV LK A +PE++ YQ +
Sbjct: 300 RKGLKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQ 359

Query: 379 VVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVP 438
           V+SN    A  L E GY LVSGG++NHLVLV+L+  GIDG+RVEK+L++  I  NKN+VP
Sbjct: 360 VLSNSSKFAKALSEKGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVP 419

Query: 439 GDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNF 498
           GD SA+VPGGIR+G+PA+T+RGF E++FV +A++    V + L+ K   +G+KL+DF+  
Sbjct: 420 GDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEA 479

Query: 499 VTSPNFSLMNNVADLRGRVEALTTQFPIPG 528
           + + ++ + + ++ L+  VE    QFP  G
Sbjct: 480 LQTSSY-VQSEISKLKHDVEEFAKQFPTIG 508

Interconversion of serine and glycine.

Pisum sativum (taxid: 3888)

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 1

>sp|P49358|GLYN_FLAPR Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria pringlei PE=2 SV=1

 Score =  583 bits (1504), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 281/451 (62%), Positives = 340/451 (75%), Gaps = 12/451 (2%)

Query: 87  DPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYI 146
           DPE+ +II  EK RQ+K LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGGNEYI
Sbjct: 60  DPEIADIIELEKARQWKGLELILSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 119

Query: 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHL 206
           D  ETLCQKRAL AF LD  KWGVNVQPLSGSPANF VYTA+LK HDRIM LDLPHGGHL
Sbjct: 120 DMAETLCQKRALEAFRLDAAKWGVNVQPLSGSPANFHVYTALLKAHDRIMALDLPHGGHL 179

Query: 207 SHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDF 266
           SHG+ T  +++S  SI+FE+MPYRL+ESTG +DYD LEK+A LFRPKLI+AGASAY R +
Sbjct: 180 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 239

Query: 267 DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFF 326
           DY R+R++ D   A+L+ DMAHISGLVAA V+  PF Y DVVTTTTHKSLRGPRG MIFF
Sbjct: 240 DYARIRKVCDKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFF 299

Query: 327 KK---------DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377
           +K           VL  + E  IN AVFPGLQGGPHNHTI GLAV LK A + E+K YQ 
Sbjct: 300 RKGVKEVNKQGKEVL-YDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTAEYKAYQE 358

Query: 378 KVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSV 437
           +V+SNC   A  LV+ GY+LVSGG++NHLVLV+L+  GIDG+RVEK+L+   I  NKN+V
Sbjct: 359 QVMSNCAKFAETLVKSGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTV 418

Query: 438 PGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMN 497
           PGD SA+VPGGIR+G+PA+T+RGF E++F  +A      V++ ++ K   QG+KL+DF+ 
Sbjct: 419 PGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYLFDLAVKLAVKIKGEAQGTKLKDFVA 478

Query: 498 FVTSPNFSLMNNVADLRGRVEALTTQFPIPG 528
            + S  F   + ++ LR  VE    QFP  G
Sbjct: 479 AMQSSAFQ--SEISKLRHDVEEYAKQFPTIG 507

Interconversion of serine and glycine.

Flaveria pringlei (taxid: 4226)

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 1

>sp|P49357|GLYM_FLAPR Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei PE=2 SV=1

 Score =  577 bits (1487), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 275/450 (61%), Positives = 340/450 (75%), Gaps = 10/450 (2%)

Query: 87  DPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYI 146
           DPE+ +II  EK RQ+K LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGGNEYI
Sbjct: 60  DPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 119

Query: 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHL 206
           D  ETLCQKRAL AF LD  KWGVNVQPLSGSPANF VYTA+LK HDRIM LDLPHGGHL
Sbjct: 120 DMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKAHDRIMALDLPHGGHL 179

Query: 207 SHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDF 266
           SHG+ T  +++S  SI+FE+MPYRL+ESTG +DYD LEK+A LFRPKLI+AGASAY R +
Sbjct: 180 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 239

Query: 267 DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFF 326
           DY R+R++ D   A+++ DMAHISGLVAA V+  PF Y DVVTTTTHKSLRGPRG MIFF
Sbjct: 240 DYARIRKVCDKQKAIMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFF 299

Query: 327 KK--------DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378
           +K           +  + E  IN AVFPGLQGGPHNHTI GLAV LK A + E+K YQ +
Sbjct: 300 RKGLKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTAEYKAYQEQ 359

Query: 379 VVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVP 438
           V+SN    A  LV+ GY+LVSGG++NHLVLV+L+  GIDG++VEK+L+   I  NKN+VP
Sbjct: 360 VMSNSAKFAETLVKSGYELVSGGTENHLVLVNLKNKGIDGSKVEKVLEAVHIAANKNTVP 419

Query: 439 GDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNF 498
           GD SA+VPGGIR+G+PA+T+RGF E++F  +A F    V++ ++ K   +G+KL+DF+  
Sbjct: 420 GDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDLAVKLAVKIKGEAKGTKLKDFVTA 479

Query: 499 VTSPNFSLMNNVADLRGRVEALTTQFPIPG 528
           + S   ++ + ++ LR  VE    QFP  G
Sbjct: 480 MESS--AIQSEISKLRHDVEEYAKQFPTIG 507

Interconversion of serine and glycine.

Flaveria pringlei (taxid: 4226)

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 1

>sp|P34897|GLYM_HUMAN Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens GN=SHMT2 PE=1 SV=3

 Score =  572 bits (1475), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 274/456 (60%), Positives = 344/456 (75%), Gaps = 12/456 (2%)

Query: 82  SLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG 141
           SL ++DPE+ E++ +EK+RQ + LELIASENF SRA +EA+GSCL NKYSEG PGKRYYG
Sbjct: 48  SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 107

Query: 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP 201
           G E +DE+E LCQ+RAL AF+LD  +WGVNVQP SGSPAN  VYTA+L+PHDRIMGLDLP
Sbjct: 108 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLP 167

Query: 202 HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261
            GGHL+HG+M+  +R+S TSI+FESMPY+L+  TGL+DY+ L  TA LFRP+LIIAG SA
Sbjct: 168 DGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSA 227

Query: 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG 321
           Y R  DY RMR++ D V A L+ DMAHISGLVAA V+  PFK+ D+VTTTTHK+LRG R 
Sbjct: 228 YARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARS 287

Query: 322 GMIFFKK-----DPVLGVEL----ESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372
           G+IF++K     DP  G E+    E  IN AVFP LQGGPHNH I  +AV LK A +P F
Sbjct: 288 GLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMF 347

Query: 373 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITL 432
           + Y  +V+ N RA+A  L+E GY LVSGG+DNHLVLVDLRP G+DGAR E++L++ SIT 
Sbjct: 348 REYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITA 407

Query: 433 NKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKL 492
           NKN+ PGD+SA+ PGG+R+G+PA+T+R F E +F  + DFI EGV I LE K   + +KL
Sbjct: 408 NKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKS--KTAKL 465

Query: 493 QDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 528
           QDF +F+   +      +A+LR RVE     FP+PG
Sbjct: 466 QDFKSFLLKDS-ETSQRLANLRQRVEQFARAFPMPG 500

Contributes to the de novo mitochondrial thymidylate biosynthesis pathway. Required to prevent uracil accumulation in mtDNA. Interconversion of serine and glycine. Associates with mitochondrial DNA.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 1

>sp|Q5E9P9|GLYC_BOVIN Serine hydroxymethyltransferase, cytosolic OS=Bos taurus GN=SHMT1 PE=2 SV=3

 Score =  571 bits (1471), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 277/457 (60%), Positives = 341/457 (74%), Gaps = 11/457 (2%)

Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           L + D EV  II KE  RQ   LELIASENF SRAV+EA+GSCL NKYSEG PG+RYYGG
Sbjct: 26  LKDNDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGG 85

Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
            E+IDELE LCQKRAL  + LD   WGVNVQP SGSPANF VYTA+++PH RIMGLDLP 
Sbjct: 86  TEFIDELEVLCQKRALQVYGLDSQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPD 145

Query: 203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
           GGHL+HGFMT K+++S TSI+FESMPY+++  TG ++YD LE+ A LF P+LIIAG S Y
Sbjct: 146 GGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPRLIIAGTSCY 205

Query: 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
            R+ DY R+R+IAD  GA LM DMAH+SGLVAA VV  PF++C VV+TTTHK+LRG R G
Sbjct: 206 SRNLDYARLRKIADDNGAYLMADMAHVSGLVAAGVVPSPFEHCHVVSTTTHKTLRGCRAG 265

Query: 323 MIFFKK-----DPVLGVE----LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373
           MIF++K     DP  G E    LES IN+AVFPGLQGGPHNH I G+AV LK A +PEF+
Sbjct: 266 MIFYRKGVRSVDPKTGRETRYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFR 325

Query: 374 VYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN 433
            YQ +VV+NCRALA  L+ LGY++V+GGSDNHL+LVDLR  G DG R EK+L+  SI  N
Sbjct: 326 AYQRQVVANCRALAEALMGLGYRVVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACN 385

Query: 434 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQ-GSKL 492
           KN+ PGDKSAL P G+R+G+PA+T+RG  E++F  +A FIH G+E+TL+ +  V   + L
Sbjct: 386 KNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKVAHFIHRGIELTLQIQDAVGVKATL 445

Query: 493 QDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
           ++FM  +          VA LR  VE+  T FP+PG+
Sbjct: 446 KEFMEKLAGAE-EHHRAVAALRAEVESFATLFPLPGL 481

Interconversion of serine and glycine.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 1

>sp|P14519|GLYM_RABIT Serine hydroxymethyltransferase, mitochondrial OS=Oryctolagus cuniculus GN=SHMT2 PE=1 SV=2

 Score =  570 bits (1470), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 276/457 (60%), Positives = 344/457 (75%), Gaps = 14/457 (3%)

Query: 82  SLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG 141
           SL + DPE+ E++ +EK+RQ + LELIASENF  RA +EA+GSCL NKYSEG PGKRYYG
Sbjct: 48  SLSDTDPEMWELLQREKDRQCRGLELIASENFCIRAALEALGSCLNNKYSEGYPGKRYYG 107

Query: 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP 201
           G E +DE+E LCQ+RAL AF+LD  +WGVNVQP SGSPAN   YTA+L+PHDRIMGLDLP
Sbjct: 108 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLP 167

Query: 202 HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261
            GGHL+HG+M+  +RVS TSI+FESMPY+L+  TGL+DY+ L  TA LFRP+LIIAG SA
Sbjct: 168 DGGHLTHGYMSDVKRVSATSIFFESMPYKLNPQTGLIDYEQLALTARLFRPRLIIAGTSA 227

Query: 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG 321
           Y R  DY RMR++ D V A L+ DMAHISGLVAA V+  PFK+ DVVTTTTHK+LRG R 
Sbjct: 228 YARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADVVTTTTHKTLRGARS 287

Query: 322 GMIFFKK-----DPVLGVEL----ESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372
           G+IF++K     DP  G E+    E  IN AVFP LQGGPHNH I  +AV LK A +P F
Sbjct: 288 GLIFYRKGVRTVDPKTGQEIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMF 347

Query: 373 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITL 432
           + Y  +V+ N RA+A  L+E GY LVSGG+DNHLVLVDLRP G+DGAR E++L++ SIT 
Sbjct: 348 REYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITA 407

Query: 433 NKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKL 492
           NKN+ PGD+SA+ PGG+R+G+PA+T+R F E +F  + DFI EGV I LE K+  + +KL
Sbjct: 408 NKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKR--KTAKL 465

Query: 493 QDFMNF-VTSPNFSLMNNVADLRGRVEALTTQFPIPG 528
           QDF +F +  P  S   ++ADLR RV+     FP+PG
Sbjct: 466 QDFKSFLLKDPETS--QHLADLRRRVQQFARAFPMPG 500

Contributes to the de novo mitochondrial thymidylate biosynthesis pathway. Required to prevent uracil accumulation in mtDNA. Interconversion of serine and glycine. Associates with mitochondrial DNA.

Oryctolagus cuniculus (taxid: 9986)

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 1

>sp|Q3SZ20|GLYM_BOVIN Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus GN=SHMT2 PE=2 SV=1

 Score =  570 bits (1468), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 274/457 (59%), Positives = 346/457 (75%), Gaps = 14/457 (3%)

Query: 82  SLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG 141
           SL ++DPE+ E++ +EK+RQ + LELIASENF SRA +EA+GSCL NKYSEG PGKRYYG
Sbjct: 48  SLSDSDPEMWELLRREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 107

Query: 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP 201
           G E +DE+E LCQ+RAL AF+LD  +WGVNVQP SGSPAN   YTA+L+PHDRIMGLDLP
Sbjct: 108 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLP 167

Query: 202 HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261
            GGHL+HG+M+  +R+S TSI+FESMPY+L+  TGL+DYD L  TA LF+P+LIIAG SA
Sbjct: 168 DGGHLTHGYMSDVKRISATSIFFESMPYKLNPQTGLIDYDQLALTARLFKPRLIIAGTSA 227

Query: 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG 321
           Y R  DY RMR++ D V A L+ DMAHISGLVAA V+  PFK+ D+VTTTTHK+LRG R 
Sbjct: 228 YARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARS 287

Query: 322 GMIFFKK-----DPVLGVEL----ESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372
           G+IF++K     DP  G E+    E  IN AVFP LQGGPHNH I  +AV LK A +P F
Sbjct: 288 GLIFYRKGVQAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMF 347

Query: 373 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITL 432
           + Y  +++ N +A+A+ L+E GY LVSGG+DNHLVLVDLRP G+DGAR E++L++ SIT 
Sbjct: 348 REYSLQILKNAQAMANALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITA 407

Query: 433 NKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKL 492
           NKN+ PGD+SA+ PGG+R+G+PA+T+RGF E +F  +  FI EGV I LE K   + +KL
Sbjct: 408 NKNTCPGDRSAITPGGLRLGAPALTSRGFLEDDFRKVVGFIDEGVNIGLEVKS--KTTKL 465

Query: 493 QDFMNF-VTSPNFSLMNNVADLRGRVEALTTQFPIPG 528
           QDF +F +  P  S  + +ADLR RVE     FP+PG
Sbjct: 466 QDFKSFLLKDPETS--HQLADLRQRVEQFARAFPMPG 500

Contributes to the de novo mitochondrial thymidylate biosynthesis pathway. Required to prevent uracil accumulation in mtDNA. Interconversion of serine and glycine. Associates with mitochondrial DNA.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 1

>sp|P35623|GLYC_SHEEP Serine hydroxymethyltransferase, cytosolic OS=Ovis aries GN=SHMT1 PE=1 SV=3

 Score =  568 bits (1465), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 277/457 (60%), Positives = 340/457 (74%), Gaps = 11/457 (2%)

Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           L + D EV  II KE  RQ   LELIASENF SRAV+EA+GSCL NKYSEG PG+RYYGG
Sbjct: 26  LKDNDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGG 85

Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
            E+IDELE LCQKRAL  + LD   WGVNVQP SGSPANF VYTA+++PH RIMGLDLP 
Sbjct: 86  TEFIDELEVLCQKRALQVYGLDPECWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPD 145

Query: 203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
           GGHL+HGFMT K+++S TSI+FESMPY+++  TG ++YD LE+ A LF P+LIIAG S Y
Sbjct: 146 GGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPRLIIAGTSCY 205

Query: 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
            R+ DY R+R+IAD  GA LM DMAHISGLVAA VV  PF++C VV+TTTHK+LRG R G
Sbjct: 206 SRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPSPFEHCHVVSTTTHKTLRGCRAG 265

Query: 323 MIFFKK-----DPVLGVE----LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373
           MIF++K     DP  G E    LES IN+AVFPGLQGGPHNH I G+AV LK A +PEF+
Sbjct: 266 MIFYRKGVRSVDPKTGKETRYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFR 325

Query: 374 VYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN 433
            YQ +VV+NCRALA  L+ LGY++V+GGSDNHL+LVDLR  G DG R EK+L+  SI  N
Sbjct: 326 AYQRQVVANCRALAEALMGLGYRVVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACN 385

Query: 434 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQ-GSKL 492
           KN+ PGDKSAL P G+R+G+PA+T+RG  E++F  +A FIH G+E+TL+ +  V   + L
Sbjct: 386 KNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFRKVAHFIHRGIELTLQIQDAVGVKATL 445

Query: 493 QDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
           ++FM  +          V  LR  VE+  T FP+PG+
Sbjct: 446 KEFMEKLAGAE-EHQRAVTALRAEVESFATLFPLPGL 481

Interconversion of serine and glycine.

Ovis aries (taxid: 9940)

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	529
224092216	529	serine hydroxymethyltransferase 8 [Popul	1.0	1.0	0.877	0.0
134142079	529	plastid serine hydroxymethyltransferase	1.0	1.0	0.873	0.0
225429452	528	PREDICTED: serine hydroxymethyltransfera	0.998	1.0	0.854	0.0
255557552	527	serine hydroxymethyltransferase, putativ	0.996	1.0	0.858	0.0
449460014	528	PREDICTED: serine hydroxymethyltransfera	0.998	1.0	0.839	0.0
351724373	536	serine hydroxymethyltransferase 4 [Glyci	0.992	0.979	0.792	0.0
18418028	529	serine hydroxymethyltransferase 3 [Arabi	1.0	1.0	0.801	0.0
14030719	529	AT4g32520/F8B4_220 [Arabidopsis thaliana	1.0	1.0	0.801	0.0
297798710	530	hypothetical protein ARALYDRAFT_491471 [	1.0	0.998	0.796	0.0
356555484	536	PREDICTED: LOW QUALITY PROTEIN: serine h	0.992	0.979	0.779	0.0

>gi|224092216|ref|XP_002309513.1| serine hydroxymethyltransferase 8 [Populus trichocarpa] gi|222855489|gb|EEE93036.1| serine hydroxymethyltransferase 8 [Populus trichocarpa]

 Score =  968 bits (2503), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/529 (87%), Positives = 494/529 (93%)

Query: 1   MQACSGAAVMGSLQQPIWVKGPRLPSEGSVMVGFPNQIRLNMVKPCRCSSIEGSLVTGRP 60
           MQA SGAAVMGSLQQP+  KGP  P + SV++GFP Q++LN VKPCR SS+EGSLVTGRP
Sbjct: 1   MQATSGAAVMGSLQQPVLSKGPAFPMKRSVIIGFPYQVKLNSVKPCRASSLEGSLVTGRP 60

Query: 61  PSSVSVPIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVME 120
           PSSVSVPIPE G D SSF DY LGEADPEV EII KEK+RQFKSLELIASENFTSRAVME
Sbjct: 61  PSSVSVPIPETGADISSFKDYGLGEADPEVLEIINKEKDRQFKSLELIASENFTSRAVME 120

Query: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180
           AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALA+FNLD  KWGVNVQPLSGSPA
Sbjct: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALASFNLDGKKWGVNVQPLSGSPA 180

Query: 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240
           NFEVYTA+LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY
Sbjct: 181 NFEVYTALLKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240

Query: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300
           DMLEKTAILFRPKLIIAGASAYPRDFDYPRMR+IADAVGA LMMDMAHISGLVAASVVAD
Sbjct: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVAD 300

Query: 301 PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGL 360
           PF+YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGV++ESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 301 PFEYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVDMESAINNAVFPGLQGGPHNHTIGGL 360

Query: 361 AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGAR 420
           AVCLKHAQSPEFK YQ +V+ N RALA+R+VELGYKLVSGGSDNHL+LVDLRP+G+DGAR
Sbjct: 361 AVCLKHAQSPEFKAYQKQVICNSRALANRMVELGYKLVSGGSDNHLILVDLRPLGLDGAR 420

Query: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480
           VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF+E EFVA AD IHEGV+I+
Sbjct: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTETEFVATADLIHEGVQIS 480

Query: 481 LEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
           LEAKK V GSKLQDF+ FV SP+F L + V+DL+ RVEALTTQFPIPG+
Sbjct: 481 LEAKKSVSGSKLQDFLKFVKSPDFPLTDKVSDLQRRVEALTTQFPIPGL 529

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|134142079|gb|ABO61383.1| plastid serine hydroxymethyltransferase [Populus tremuloides]

 Score =  965 bits (2495), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/529 (87%), Positives = 493/529 (93%)

Query: 1   MQACSGAAVMGSLQQPIWVKGPRLPSEGSVMVGFPNQIRLNMVKPCRCSSIEGSLVTGRP 60
           MQA SGAAVMGSLQQP+  KGP  P + SV++GFP Q++LN VKPCR SS+EGSLVTGRP
Sbjct: 1   MQATSGAAVMGSLQQPVLSKGPAFPMKRSVIIGFPYQVKLNSVKPCRASSLEGSLVTGRP 60

Query: 61  PSSVSVPIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVME 120
           PSSVSVPIPE G D SSF DY L EADPEV EII KEK+RQFKSLELIASENFTSRAVME
Sbjct: 61  PSSVSVPIPETGADISSFKDYGLSEADPEVLEIIKKEKDRQFKSLELIASENFTSRAVME 120

Query: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180
           AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALA+FNLD  KWGVNVQPLSGSPA
Sbjct: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALASFNLDGKKWGVNVQPLSGSPA 180

Query: 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240
           NFEVYTA+LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY
Sbjct: 181 NFEVYTALLKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240

Query: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300
           DMLEKTAILFRPKLIIAGASAYPRDFDYPRMR+IADAVGA LMMDMAHISGLV ASVVAD
Sbjct: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVPASVVAD 300

Query: 301 PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGL 360
           PF+YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGV++ESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 301 PFEYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVDMESAINNAVFPGLQGGPHNHTIGGL 360

Query: 361 AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGAR 420
           AVCLKHAQSPEFK YQ +V+ N RALA+R+VELGYKLVSGGSDNHL+LVDLRP+G+DGAR
Sbjct: 361 AVCLKHAQSPEFKAYQKQVICNSRALANRMVELGYKLVSGGSDNHLILVDLRPLGLDGAR 420

Query: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480
           VEKILD+ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF+E+EFVA AD IHEGV+I+
Sbjct: 421 VEKILDIASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEREFVATADLIHEGVQIS 480

Query: 481 LEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
           LEAKK V GSKLQDF+ FV SP+F L + V+DLR RVEALTTQFPIPG+
Sbjct: 481 LEAKKSVSGSKLQDFLKFVKSPDFPLTDKVSDLRRRVEALTTQFPIPGL 529

Source: Populus tremuloides

Species: Populus tremuloides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429452|ref|XP_002277146.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial [Vitis vinifera] gi|296081614|emb|CBI20619.3| unnamed protein product [Vitis vinifera]

 Score =  944 bits (2440), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/529 (85%), Positives = 486/529 (91%), Gaps = 1/529 (0%)

Query: 1   MQACSGAAVMGSLQQPIWVKGPRLPSEGSVMVGFPNQIRLNMVKPCRCSSIEGSLVTGRP 60
           MQACSG A MGSLQQPIW+KG      GS + GFP+QI+LN VKPCR S I+GSLVTG+P
Sbjct: 1   MQACSGTAAMGSLQQPIWIKGSSFAPNGSTVNGFPHQIKLNSVKPCR-SYIKGSLVTGKP 59

Query: 61  PSSVSVPIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVME 120
           PSSVSV +P  G  G +F+D+ L EADPEVC II KEK+RQ KSLELIASENFTSRAVME
Sbjct: 60  PSSVSVTVPGNGDSGVNFIDHGLNEADPEVCAIIYKEKQRQMKSLELIASENFTSRAVME 119

Query: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180
           AVGSCLTNKYSEGLPGKRYYGGNE+IDELETLCQKRALAAF+LD  KWGVNVQPLSGSPA
Sbjct: 120 AVGSCLTNKYSEGLPGKRYYGGNEFIDELETLCQKRALAAFHLDGKKWGVNVQPLSGSPA 179

Query: 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240
           NFEVYTA+L PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY
Sbjct: 180 NFEVYTALLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 239

Query: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300
           DMLEKTA LFRPKLIIAGASAYPRDFDYPRMR+IAD VGA LMMDMAHISGLVAASVVAD
Sbjct: 240 DMLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADGVGAFLMMDMAHISGLVAASVVAD 299

Query: 301 PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGL 360
           PF+YCD+VTTTTHKSLRGPRGGMIFFKKD VLGV+LESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 300 PFEYCDIVTTTTHKSLRGPRGGMIFFKKDSVLGVDLESAINNAVFPGLQGGPHNHTIGGL 359

Query: 361 AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGAR 420
           +VCLKHAQSPEFK YQN+VVSNCRALA RL+ELGY LVSGGSDNHL+LVDLRP+GIDGAR
Sbjct: 360 SVCLKHAQSPEFKAYQNQVVSNCRALAGRLIELGYNLVSGGSDNHLILVDLRPLGIDGAR 419

Query: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480
            EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEF+A ADFIHEGV+++
Sbjct: 420 AEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFIATADFIHEGVQLS 479

Query: 481 LEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
           LEAKK V GSKL DFM FVTSP+FSL++ V+DL+ RVE LTTQFP+PG+
Sbjct: 480 LEAKKSVSGSKLLDFMKFVTSPDFSLIDRVSDLQRRVETLTTQFPMPGL 528

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557552|ref|XP_002519806.1| serine hydroxymethyltransferase, putative [Ricinus communis] gi|223541045|gb|EEF42602.1| serine hydroxymethyltransferase, putative [Ricinus communis]

 Score =  942 bits (2436), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/529 (85%), Positives = 483/529 (91%), Gaps = 2/529 (0%)

Query: 1   MQACSGAAVMGSLQQPIWVKGPRLPSEGSVMVGFPNQIRLNMVKPCRCSSIEGSLVTGRP 60
           MQ C+GA VMGSLQQP+W+KG  LP + S  VGFP+QI+LN  +PCR  +I+GSLV GRP
Sbjct: 1   MQGCTGAQVMGSLQQPVWIKGSSLPLKQSNFVGFPHQIKLNSFRPCRYLNIQGSLVAGRP 60

Query: 61  PSSVSVPIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVME 120
           PSSVSVP  EI GD SSF DY L EADPEV EII KEK RQFKSLELIASENFTSRAVME
Sbjct: 61  PSSVSVP--EIEGDRSSFKDYGLSEADPEVREIIEKEKNRQFKSLELIASENFTSRAVME 118

Query: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180
           AVGSCLTNKYSEGLPGKRYYGGNE+IDELETLCQ+RALAAF LD  KWGVNVQPLSGSPA
Sbjct: 119 AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQERALAAFGLDRKKWGVNVQPLSGSPA 178

Query: 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240
           NFEVYTA+L PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY
Sbjct: 179 NFEVYTALLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 238

Query: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300
           DMLEKTA LFRPKLIIAGASAYPRDFDYPRMR+IADAVGA LMMDMAHISGLVAASVV D
Sbjct: 239 DMLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVGD 298

Query: 301 PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGL 360
           PF+YCD+VTTTTHKSLRGPRGGMIFF+KD +LGV+LESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 299 PFEYCDIVTTTTHKSLRGPRGGMIFFRKDTILGVDLESAINNAVFPGLQGGPHNHTIGGL 358

Query: 361 AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGAR 420
           AVCLKHAQSPEFK YQ +V+SNCRALA RLVELGYKLVSGGSDNHLVLVDLRP+GIDGAR
Sbjct: 359 AVCLKHAQSPEFKAYQKQVISNCRALAYRLVELGYKLVSGGSDNHLVLVDLRPLGIDGAR 418

Query: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480
           VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF+E+EF+A ADFIHEGV+IT
Sbjct: 419 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEREFIATADFIHEGVQIT 478

Query: 481 LEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
            EAKK V GSKLQDFM  V SP+FSL + V+DL+ RVEAL TQF IPGV
Sbjct: 479 TEAKKSVSGSKLQDFMKLVASPDFSLASEVSDLQTRVEALATQFSIPGV 527

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460014|ref|XP_004147741.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Cucumis sativus] gi|449519543|ref|XP_004166794.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Cucumis sativus]

 Score =  927 bits (2395), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/529 (83%), Positives = 487/529 (92%), Gaps = 1/529 (0%)

Query: 1   MQACSGAAVMGSLQQPIWVKGPRLPSEGSVMVGFPNQIRLNMVKPCRCSSIEGSLVTGRP 60
           MQA SG AVMGSLQ  +  KG   PS+ S +  FP Q ++N++KPC+   +E S+V G+P
Sbjct: 1   MQATSGVAVMGSLQVAVCGKGSCFPSKSSSICVFPQQKKMNILKPCKSFKVEASMVAGKP 60

Query: 61  PSSVSVPIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVME 120
            SSVSV +PEIGG  S+FVD++L E DPEV  II KEK+RQFKSLELIASENFTSRAVME
Sbjct: 61  SSSVSVTVPEIGGV-SNFVDHALSETDPEVRSIIDKEKQRQFKSLELIASENFTSRAVME 119

Query: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180
           AVGSCLTNKYSEGLPGKRYYGGNE+IDELETLCQ+RALAAF+LD NKWGVNVQPLSGSPA
Sbjct: 120 AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPA 179

Query: 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240
           NFEVYTA+L PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE+TG+VDY
Sbjct: 180 NFEVYTAVLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDY 239

Query: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300
           DMLEKTA LFRPKLIIAGASAYPRDFDYPRMR+IADAVGA LMMDMAHISGLVAASVVAD
Sbjct: 240 DMLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVAD 299

Query: 301 PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGL 360
           PF+YCD+VTTTTHKSLRGPRGGMIFF+KDPVLGV+LESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 300 PFEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGL 359

Query: 361 AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGAR 420
           AVCLKHAQSPEFKVYQNKV++NCRALA+RLVELGYKLVSGGSDNHLVLVDLRP+GIDGAR
Sbjct: 360 AVCLKHAQSPEFKVYQNKVIANCRALANRLVELGYKLVSGGSDNHLVLVDLRPLGIDGAR 419

Query: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480
           VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF+EKEFVA+ADFIHEGV+IT
Sbjct: 420 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKIT 479

Query: 481 LEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
           L+AK L  GSKLQ+F+ FVT+ +F L + ++DLR RVEALTTQFPIPG+
Sbjct: 480 LDAKPLAPGSKLQEFLKFVTTSDFPLTDRISDLRSRVEALTTQFPIPGL 528

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724373|ref|NP_001238335.1| serine hydroxymethyltransferase 4 [Glycine max] gi|222142535|gb|ACM45954.1| serine hydroxymethyltransferase 4 [Glycine max]

 Score =  872 bits (2252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/540 (79%), Positives = 469/540 (86%), Gaps = 15/540 (2%)

Query: 1   MQACSGAAVMGSLQQ-PIWVKGPRLPSEG-SVMVGFPNQIRLNMVKPCRCSSIEGSLVTG 58
           MQAC+    M SLQQ PIW KG   P++G     GF  Q+R   +KP + S +E SLVTG
Sbjct: 1   MQACT---TMSSLQQQPIWTKGLNFPAKGYGSNNGFLPQVRFCNIKPSKASHVEASLVTG 57

Query: 59  RPPSSVSVPIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAV 118
           +P SSV   +PEIGGDGSSF+DY L EADP+V  II KEK+RQFKSLELIASENFTSRAV
Sbjct: 58  KP-SSVPFSVPEIGGDGSSFLDYGLSEADPDVRAIIDKEKDRQFKSLELIASENFTSRAV 116

Query: 119 MEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178
           MEAVGSCLTNKYSEGLPGKRYYGGNEYIDELE LCQ+RALAAF++DENKWGVNVQ LSGS
Sbjct: 117 MEAVGSCLTNKYSEGLPGKRYYGGNEYIDELEILCQQRALAAFHVDENKWGVNVQTLSGS 176

Query: 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 238
           PANF VYTA+LKPHDRIMGLDLPHGGHLSHGFMTPK+RVS TSIYFESMPYRLDESTGL+
Sbjct: 177 PANFAVYTAVLKPHDRIMGLDLPHGGHLSHGFMTPKKRVSATSIYFESMPYRLDESTGLI 236

Query: 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQ---------IADAVGALLMMDMAHI 289
           DYDMLEKTA LFRPKLI+AGASAYPRD DYPRMR+         IAD VGA LMMDMAHI
Sbjct: 237 DYDMLEKTATLFRPKLIVAGASAYPRDIDYPRMRKLITSYMHGKIADEVGAFLMMDMAHI 296

Query: 290 SGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQ 349
           SGLVAASV+++PF+YCD+VTTTTHKSLRGPRGGMIFFKKD V GV+LE AINNAVFPGLQ
Sbjct: 297 SGLVAASVLSNPFEYCDIVTTTTHKSLRGPRGGMIFFKKDTVHGVDLEPAINNAVFPGLQ 356

Query: 350 GGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 409
           GGPHNHTIGGLAVCLK+AQSPEFK YQN+VV+NCRALA RL+E GYKLVSGGSDNHLVLV
Sbjct: 357 GGPHNHTIGGLAVCLKYAQSPEFKNYQNQVVANCRALAKRLIEHGYKLVSGGSDNHLVLV 416

Query: 410 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 469
           DLRP G+DGARVEKILD+ASITLNKNSVPGDKSALVPGGIRIG+PAMTTRG  EKEF  I
Sbjct: 417 DLRPSGLDGARVEKILDLASITLNKNSVPGDKSALVPGGIRIGAPAMTTRGLGEKEFSLI 476

Query: 470 ADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
           ADFIHEGV+I+LEAK LV G+KLQDF+ FVTS  F L   V++LR +VEALTTQ+PIPGV
Sbjct: 477 ADFIHEGVQISLEAKSLVSGTKLQDFLKFVTSSEFPLGEKVSELRRKVEALTTQYPIPGV 536

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18418028|ref|NP_567895.1| serine hydroxymethyltransferase 3 [Arabidopsis thaliana] gi|186515561|ref|NP_001119098.1| serine hydroxymethyltransferase 3 [Arabidopsis thaliana] gi|332660671|gb|AEE86071.1| serine hydroxymethyltransferase 3 [Arabidopsis thaliana] gi|332660672|gb|AEE86072.1| serine hydroxymethyltransferase 3 [Arabidopsis thaliana]

 Score =  869 bits (2246), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/529 (80%), Positives = 456/529 (86%)

Query: 1   MQACSGAAVMGSLQQPIWVKGPRLPSEGSVMVGFPNQIRLNMVKPCRCSSIEGSLVTGRP 60
           MQAC G   M SLQQP  V+G   P     +  F  Q++ N+ KP R S ++ +LV+   
Sbjct: 1   MQACCGGNSMASLQQPGRVQGSVFPPIMPPVTKFSQQLKFNISKPFRSSFLKRNLVSEMR 60

Query: 61  PSSVSVPIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVME 120
            SSVS+P  EI      F DY LGE DPEV  IITKEK+RQF+SLELIASENFTSRAVME
Sbjct: 61  ASSVSLPNVEISSKEIPFEDYGLGEVDPEVRTIITKEKDRQFRSLELIASENFTSRAVME 120

Query: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180
           AVGSCLTNKYSEGLPGKRYYGGNEYID+LETLCQ RALAAF LD  KWGVNVQPLSGSPA
Sbjct: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDQLETLCQNRALAAFRLDSTKWGVNVQPLSGSPA 180

Query: 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240
           NF VYTAIL PHDRIMGLDLPHGGHLSHGFMT KRRVSGTSIYFESMPYRLDESTG+VDY
Sbjct: 181 NFAVYTAILSPHDRIMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDY 240

Query: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300
           DMLEKTA LFRPKLIIAGASAY RDFDYPRMR+IAD+VGA LMMDMAHISGLVAASVVAD
Sbjct: 241 DMLEKTATLFRPKLIIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVAD 300

Query: 301 PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGL 360
           PF+YCD+VTTTTHKSLRGPRGGMIFF+KDP+ GV+LESA+NNAVFPGLQGGPHNHTIGGL
Sbjct: 301 PFEYCDIVTTTTHKSLRGPRGGMIFFRKDPINGVDLESAVNNAVFPGLQGGPHNHTIGGL 360

Query: 361 AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGAR 420
           AVCLKHAQSPEFK YQ +VVSNCRALA+RLVELG+KLVSGGSDNHLVLVDLRPMG+DGAR
Sbjct: 361 AVCLKHAQSPEFKAYQKRVVSNCRALANRLVELGFKLVSGGSDNHLVLVDLRPMGMDGAR 420

Query: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480
           VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG SEK+FV +ADFI EGVEIT
Sbjct: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLSEKDFVVVADFIKEGVEIT 480

Query: 481 LEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
           +EAKK   GSKLQDF  FVTSP F L   V  L+ RVE  T++FPIPGV
Sbjct: 481 MEAKKAAPGSKLQDFNKFVTSPEFPLKERVKSLKERVETFTSRFPIPGV 529

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|14030719|gb|AAK53034.1|AF375450_1 AT4g32520/F8B4_220 [Arabidopsis thaliana] gi|23308475|gb|AAN18207.1| At4g32520/F8B4_220 [Arabidopsis thaliana]

 Score =  868 bits (2244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/529 (80%), Positives = 455/529 (86%)

Query: 1   MQACSGAAVMGSLQQPIWVKGPRLPSEGSVMVGFPNQIRLNMVKPCRCSSIEGSLVTGRP 60
           MQAC G   M SLQQP  V+G   P     +  F  Q++ N+ KP R S ++ +LV+   
Sbjct: 1   MQACCGGNSMASLQQPGRVQGSVFPPIMPPVTKFSQQLKFNISKPFRSSFLKRNLVSEMR 60

Query: 61  PSSVSVPIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVME 120
            SSVS+P  EI      F DY LGE DPEV  IITKEK+RQF+SLELIASENFTSRAVME
Sbjct: 61  ASSVSLPNVEISSKEIPFEDYGLGEVDPEVRTIITKEKDRQFRSLELIASENFTSRAVME 120

Query: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180
           AVGSCLTNKYSEGLPGKRYYGGNEYID+LETLCQ RALAAF LD  KWGVNVQPLSGSPA
Sbjct: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDQLETLCQNRALAAFRLDSTKWGVNVQPLSGSPA 180

Query: 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240
           NF VYTAIL PHDRIMGLDLPHGGHLSHGFMT KRRVSGTSIYFESMPYRLDESTG+VDY
Sbjct: 181 NFAVYTAILSPHDRIMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDY 240

Query: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300
           DMLEKTA LFRPKLIIAGASAY RDFDYPRMR+IAD+VGA LMMDMAHISGLVAASVVAD
Sbjct: 241 DMLEKTATLFRPKLIIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVAD 300

Query: 301 PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGL 360
           PF+YCD+VTTTTHKSLRGPRGGMIFF+KDP+ GV+LESA+NNAVFPGLQGGPHNHTIGGL
Sbjct: 301 PFEYCDIVTTTTHKSLRGPRGGMIFFRKDPINGVDLESAVNNAVFPGLQGGPHNHTIGGL 360

Query: 361 AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGAR 420
           AVCLKHAQSPEFK YQ +VVSNCRALA+RLVELG+KLVSGGSDNHLVLVDLRPMG+DGAR
Sbjct: 361 AVCLKHAQSPEFKAYQKRVVSNCRALANRLVELGFKLVSGGSDNHLVLVDLRPMGMDGAR 420

Query: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480
           VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG SEK+FV +ADFI EGVEIT
Sbjct: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLSEKDFVVVADFIKEGVEIT 480

Query: 481 LEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
           +EAKK   GSKLQDF  FVTSP F L   V  L  RVE  T++FPIPGV
Sbjct: 481 MEAKKAAPGSKLQDFNKFVTSPEFPLKERVKSLTERVETFTSRFPIPGV 529

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798710|ref|XP_002867239.1| hypothetical protein ARALYDRAFT_491471 [Arabidopsis lyrata subsp. lyrata] gi|297313075|gb|EFH43498.1| hypothetical protein ARALYDRAFT_491471 [Arabidopsis lyrata subsp. lyrata]

 Score =  868 bits (2242), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/530 (79%), Positives = 457/530 (86%), Gaps = 1/530 (0%)

Query: 1   MQACSGAAVMGSLQQPIWVKGPRLPSEGSVMVGFPNQIRLNMVKPCRCSSIEGSLVTGRP 60
           MQAC G   M SLQQP  V+G   P     +  F  Q++ N  KP R S +E +LV  R 
Sbjct: 1   MQACCGGTSMASLQQPGRVQGSVFPPLMPPVTKFSQQLKFNFSKPFRSSFLERNLVFERR 60

Query: 61  PSSVSVPIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVME 120
            SSVS+P  E+     +F DY LGE DPEV  IITKEK+RQF+SLELIASENFTSRAVME
Sbjct: 61  ASSVSLPNVEMSSKDIAFADYGLGEVDPEVRTIITKEKDRQFRSLELIASENFTSRAVME 120

Query: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180
           AVGSCLTNKYSEGLPGKRYYGGNEYID+LETLCQ RALAAF LD  KWGVNVQPLSGSPA
Sbjct: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDQLETLCQNRALAAFRLDSTKWGVNVQPLSGSPA 180

Query: 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240
           NF VYTAIL PHDRIMGLDLPHGGHLSHGFMT KRRVSGTSIYFESMPYRLDESTG+VDY
Sbjct: 181 NFAVYTAILSPHDRIMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDY 240

Query: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300
           DMLEKTA LFRPKLIIAGASAY RDFDYPR+R+IAD++GA LMMDMAHISGLVAASVVAD
Sbjct: 241 DMLEKTATLFRPKLIIAGASAYSRDFDYPRLRKIADSIGAFLMMDMAHISGLVAASVVAD 300

Query: 301 PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGL 360
           PF+YCD+VTTTTHKSLRGPRGGMIFF+KDP+ GV+LESA+NNAVFPGLQGGPHNHTIGGL
Sbjct: 301 PFEYCDIVTTTTHKSLRGPRGGMIFFRKDPINGVDLESAVNNAVFPGLQGGPHNHTIGGL 360

Query: 361 AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM-GIDGA 419
           AVCLKHAQS EFK YQ +VVSNCRALA+RLVELG+KLVSGGSDNHLVLVDLRPM  +DGA
Sbjct: 361 AVCLKHAQSLEFKAYQKRVVSNCRALANRLVELGFKLVSGGSDNHLVLVDLRPMVSMDGA 420

Query: 420 RVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479
           RVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG SEK+FVA+ADFI EGVEI
Sbjct: 421 RVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLSEKDFVAVADFIKEGVEI 480

Query: 480 TLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
           T+EAKK   GSKLQDF  FVTSP+F L+  V  L+ RVE+ T+ FPIPGV
Sbjct: 481 TMEAKKATPGSKLQDFTKFVTSPDFPLIEKVKSLKERVESFTSHFPIPGV 530

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555484|ref|XP_003546061.1| PREDICTED: LOW QUALITY PROTEIN: serine hydroxymethyltransferase, mitochondrial-like [Glycine max]

 Score =  858 bits (2216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/540 (77%), Positives = 465/540 (86%), Gaps = 15/540 (2%)

Query: 1   MQACSGAAVMGSLQQ-PIWVKGPRLPSEG-SVMVGFPNQIRLNMVKPCRCSSIEGSLVTG 58
           MQAC+   +M SLQQ PIW KG   P++G     GF  Q+R   +KP + S +E SLV G
Sbjct: 1   MQACT---MMSSLQQQPIWTKGLNFPAKGYGSNNGFVTQLRFCNIKPSKASHVEASLVAG 57

Query: 59  RPPSSVSVPIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAV 118
           +P SSVS  +PEIGGDGSSF+DY L EADPEV  II KEK+RQFKSLELIASENFTSRAV
Sbjct: 58  KP-SSVSFSVPEIGGDGSSFLDYGLSEADPEVRAIIDKEKDRQFKSLELIASENFTSRAV 116

Query: 119 MEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178
           MEAVGSCLTNKYSEGLPG+RYYGGNEYIDELETLCQ+RALAAF++D NKWGVNVQ LSGS
Sbjct: 117 MEAVGSCLTNKYSEGLPGRRYYGGNEYIDELETLCQQRALAAFHVDGNKWGVNVQTLSGS 176

Query: 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 238
           PANF V+TA+LKPHDRIMGLDLPHGGHLSHGFMTPK+RVS TSIYFE MPY LDESTGL+
Sbjct: 177 PANFAVFTAVLKPHDRIMGLDLPHGGHLSHGFMTPKKRVSATSIYFEPMPYXLDESTGLI 236

Query: 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQ---------IADAVGALLMMDMAHI 289
           DYDMLEKTA LFRPKLIIAGASAYP D DYPRMR+         IAD VGA LMMDMAHI
Sbjct: 237 DYDMLEKTATLFRPKLIIAGASAYPXDIDYPRMRKLITSYTHGKIADEVGAFLMMDMAHI 296

Query: 290 SGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQ 349
           SGLVAASV+A+PF+YCD+VTTTTHKSLRGPRGGMIFFKKD V GV+LE AINNAVFPGLQ
Sbjct: 297 SGLVAASVLANPFEYCDIVTTTTHKSLRGPRGGMIFFKKDTVHGVDLEPAINNAVFPGLQ 356

Query: 350 GGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 409
           GGPHNHTIGGLAVCLK+AQSPEFK YQN+VV+NC+ALA +L+E GYKLVSGGSDNHLVLV
Sbjct: 357 GGPHNHTIGGLAVCLKYAQSPEFKNYQNQVVANCKALAQQLIEHGYKLVSGGSDNHLVLV 416

Query: 410 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 469
           DLRP G+DGARVEKILDMASITLNKNSVP DKSALVPGGIRIG+PAMTTRG  EKEF  I
Sbjct: 417 DLRPSGLDGARVEKILDMASITLNKNSVPDDKSALVPGGIRIGTPAMTTRGLGEKEFSLI 476

Query: 470 ADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
           ADF+HEGV+I LEAK LV G+KLQDF+ FV+S  F L   +++LR +VEALTTQ+PIPGV
Sbjct: 477 ADFLHEGVQICLEAKSLVSGTKLQDFLKFVSSSEFPLGEKISELRRKVEALTTQYPIPGV 536

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	529
TAIR|locus:2127806	529	SHM3 "serine hydroxymethyltran	1.0	1.0	0.792	1.8e-222
TAIR|locus:2005518	517	SHM1 "serine transhydroxymethy	0.841	0.860	0.625	6e-151
RGD|1312011	681	Shmt1 "serine hydroxymethyltra	0.843	0.654	0.614	1.2e-147
UNIPROTKB|P34896	483	SHMT1 "Serine hydroxymethyltra	0.841	0.921	0.610	3.5e-146
UNIPROTKB|Q5E9P9	484	SHMT1 "Serine hydroxymethyltra	0.841	0.919	0.609	9.3e-146
UNIPROTKB|Q3SZ20	504	SHMT2 "Serine hydroxymethyltra	0.899	0.944	0.569	1.2e-145
UNIPROTKB|E2RIV3	484	SHMT1 "Uncharacterized protein	0.843	0.921	0.601	1.5e-145
UNIPROTKB|E1BS67	486	SHMT1 "Uncharacterized protein	0.865	0.942	0.585	1.9e-145
UNIPROTKB|P34897	504	SHMT2 "Serine hydroxymethyltra	0.839	0.880	0.600	1.9e-145
UNIPROTKB|F1SL74	504	LOC100626911 "Serine hydroxyme	0.839	0.880	0.605	1.9e-145

TAIR|locus:2127806 SHM3 "serine hydroxymethyltransferase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 2148 (761.2 bits), Expect = 1.8e-222, P = 1.8e-222
 Identities = 419/529 (79%), Positives = 450/529 (85%)

Query:     1 MQACSGAAVMGSLQQPIWVKGPRLPSEGSVMVGFPNQIRLNMVKPCRCSSIEGSLVTGRX 60
             MQAC G   M SLQQP  V+G   P     +  F  Q++ N+ KP R S ++ +LV+   
Sbjct:     1 MQACCGGNSMASLQQPGRVQGSVFPPIMPPVTKFSQQLKFNISKPFRSSFLKRNLVSEMR 60

Query:    61 XXXXXXXIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVME 120
                      EI      F DY LGE DPEV  IITKEK+RQF+SLELIASENFTSRAVME
Sbjct:    61 ASSVSLPNVEISSKEIPFEDYGLGEVDPEVRTIITKEKDRQFRSLELIASENFTSRAVME 120

Query:   121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180
             AVGSCLTNKYSEGLPGKRYYGGNEYID+LETLCQ RALAAF LD  KWGVNVQPLSGSPA
Sbjct:   121 AVGSCLTNKYSEGLPGKRYYGGNEYIDQLETLCQNRALAAFRLDSTKWGVNVQPLSGSPA 180

Query:   181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240
             NF VYTAIL PHDRIMGLDLPHGGHLSHGFMT KRRVSGTSIYFESMPYRLDESTG+VDY
Sbjct:   181 NFAVYTAILSPHDRIMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDY 240

Query:   241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300
             DMLEKTA LFRPKLIIAGASAY RDFDYPRMR+IAD+VGA LMMDMAHISGLVAASVVAD
Sbjct:   241 DMLEKTATLFRPKLIIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVAD 300

Query:   301 PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGL 360
             PF+YCD+VTTTTHKSLRGPRGGMIFF+KDP+ GV+LESA+NNAVFPGLQGGPHNHTIGGL
Sbjct:   301 PFEYCDIVTTTTHKSLRGPRGGMIFFRKDPINGVDLESAVNNAVFPGLQGGPHNHTIGGL 360

Query:   361 AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGAR 420
             AVCLKHAQSPEFK YQ +VVSNCRALA+RLVELG+KLVSGGSDNHLVLVDLRPMG+DGAR
Sbjct:   361 AVCLKHAQSPEFKAYQKRVVSNCRALANRLVELGFKLVSGGSDNHLVLVDLRPMGMDGAR 420

Query:   421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480
             VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG SEK+FV +ADFI EGVEIT
Sbjct:   421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLSEKDFVVVADFIKEGVEIT 480

Query:   481 LEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
             +EAKK   GSKLQDF  FVTSP F L   V  L+ RVE  T++FPIPGV
Sbjct:   481 MEAKKAAPGSKLQDFNKFVTSPEFPLKERVKSLKERVETFTSRFPIPGV 529

GO:0003824 "catalytic activity" evidence=IEA

GO:0004372 "glycine hydroxymethyltransferase activity" evidence=IEA;ISS;IDA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006544 "glycine metabolic process" evidence=IEA;ISS

GO:0006563 "L-serine metabolic process" evidence=IEA;ISS

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009536 "plastid" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0006164 "purine nucleotide biosynthetic process" evidence=RCA

TAIR|locus:2005518 SHM1 "serine transhydroxymethyltransferase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1473 (523.6 bits), Expect = 6.0e-151, P = 6.0e-151
 Identities = 284/454 (62%), Positives = 349/454 (76%)

Query:    83 LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
             L E DPE+ +II  EK RQ+K LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGG
Sbjct:    55 LEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 114

Query:   143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
             NEYID  ETLCQKRAL AF LD  KWGVNVQPLSGSPANF VYTA+LKPH+RIM LDLPH
Sbjct:   115 NEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPH 174

Query:   203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
             GGHLSHG+ T  +++S  SI+FE+MPYRLDESTG +DYD +EK+A LFRPKLI+AGASAY
Sbjct:   175 GGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVAGASAY 234

Query:   263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
              R +DY R+R++ +   A+++ DMAHISGLVAA+V+  PF Y DVVTTTTHKSLRGPRG 
Sbjct:   235 ARLYDYARIRKVCNKQKAVMLADMAHISGLVAANVIPSPFDYADVVTTTTHKSLRGPRGA 294

Query:   323 MIFFKKDPV----LGVEL----ESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374
             MIFF+K        G E+    E  IN AVFPGLQGGPHNHTI GLAV LK A + E+K 
Sbjct:   295 MIFFRKGVKEINKQGKEVLYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKA 354

Query:   375 YQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNK 434
             YQ +V+SN    A  L+E GY+LVSGG+DNHLVLV+L+P GIDG+RVEK+L+   I  NK
Sbjct:   355 YQEQVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNK 414

Query:   435 NSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQD 494
             N+VPGD SA+VPGGIR+G+PA+T+RGF E++F  +A++  + V I L+ K   QG+KL+D
Sbjct:   415 NTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKD 474

Query:   495 FMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 528
             F++ + S + ++ + +A LR  VE    QFP  G
Sbjct:   475 FVSAMESSS-TIQSEIAKLRHEVEEFAKQFPTIG 507

GO:0003824 "catalytic activity" evidence=IEA

GO:0004372 "glycine hydroxymethyltransferase activity" evidence=IEA;ISS;TAS

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0006544 "glycine metabolic process" evidence=IEA;ISS

GO:0006563 "L-serine metabolic process" evidence=IEA;ISS

GO:0019464 "glycine decarboxylation via glycine cleavage system" evidence=IMP

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0005634 "nucleus" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009626 "plant-type hypersensitive response" evidence=TAS

GO:0022626 "cytosolic ribosome" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0010319 "stromule" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009853 "photorespiration" evidence=IMP

GO:0016020 "membrane" evidence=IDA

GO:0008266 "poly(U) RNA binding" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

RGD|1312011 Shmt1 "serine hydroxymethyltransferase 1 (soluble)" [Rattus norvegicus (taxid:10116)]

 Score = 1442 (512.7 bits), Expect = 1.2e-147, P = 1.2e-147
 Identities = 281/457 (61%), Positives = 344/457 (75%)

Query:    83 LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
             L E+D EV  II KE  RQ   LELIASENF SRAV+EA+GSCL NKYSEG PG+RYYGG
Sbjct:   223 LKESDAEVYSIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGG 282

Query:   143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
              E+IDELETLCQKRAL A++LD   WGVNVQP SGSPANF VYTA+++PH RIMGLDLP 
Sbjct:   283 TEFIDELETLCQKRALQAYHLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPD 342

Query:   203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
             GGHL+HGFMT K+++S TSI+FESMPY++   TG ++YD LE+ A LF PKLIIAG S Y
Sbjct:   343 GGHLTHGFMTDKKKISATSIFFESMPYKVYPDTGYINYDQLEENASLFHPKLIIAGTSCY 402

Query:   263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
              R+ DY R+R+IAD  GA LM DMAHISGLVAA VV  PF++C VVTTTTHK+LRG R G
Sbjct:   403 SRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTLRGCRAG 462

Query:   323 MIFFKK-----DPVLG----VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373
             MIF++K     DP  G     ELES IN+AVFPGLQGGPHNH I G+AV LK A + EFK
Sbjct:   463 MIFYRKGVRSVDPKTGEETYYELESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTTEFK 522

Query:   374 VYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN 433
             +YQ +V++NCRAL+  L ELGYK+V+GGSDNHL+L+DLRP G DG R EK+L+  SI  N
Sbjct:   523 IYQLQVLANCRALSDALTELGYKIVTGGSDNHLILMDLRPKGTDGGRAEKVLEACSIACN 582

Query:   434 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKK-LVQGSKL 492
             KN+ PGDKSAL P G+R+G+PA+T+RG  E++F  IA FIH G+E+TL+ +  +   + L
Sbjct:   583 KNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKIAHFIHRGIELTLQIQSHMTMRATL 642

Query:   493 QDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
             ++F   +T       + VA LR  VE   + F +PG+
Sbjct:   643 KEFKEKLTGDE-KFQSAVAALREEVENFASNFSLPGL 678

GO:0004372 "glycine hydroxymethyltransferase activity" evidence=ISO;IDA;TAS

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0005829 "cytosol" evidence=ISO;IDA;TAS

GO:0006544 "glycine metabolic process" evidence=IDA;TAS

GO:0006545 "glycine biosynthetic process" evidence=IDA

GO:0006563 "L-serine metabolic process" evidence=TAS

GO:0006565 "L-serine catabolic process" evidence=IEA;ISO

GO:0008732 "L-allo-threonine aldolase activity" evidence=IDA

GO:0009113 "purine nucleobase biosynthetic process" evidence=IEA;ISO

GO:0016597 "amino acid binding" evidence=IPI

GO:0019264 "glycine biosynthetic process from serine" evidence=IDA

GO:0030170 "pyridoxal phosphate binding" evidence=ISO;IDA;TAS

GO:0035999 "tetrahydrofolate interconversion" evidence=IEA

GO:0042802 "identical protein binding" evidence=IDA

GO:0042803 "protein homodimerization activity" evidence=IEA;ISO

GO:0046655 "folic acid metabolic process" evidence=IEA;ISO

GO:0051262 "protein tetramerization" evidence=ISO

GO:0051289 "protein homotetramerization" evidence=IDA

UNIPROTKB|P34896 SHMT1 "Serine hydroxymethyltransferase, cytosolic" [Homo sapiens (taxid:9606)]

 Score = 1428 (507.7 bits), Expect = 3.5e-146, P = 3.5e-146
 Identities = 279/457 (61%), Positives = 343/457 (75%)

Query:    83 LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
             L ++D EV  II KE  RQ   LELIASENF SRAV+EA+GSCL NKYSEG PG+RYYGG
Sbjct:    26 LKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGG 85

Query:   143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
              E+IDELETLCQKRAL A+ LD   WGVNVQP SGSPANF VYTA+++PH RIMGLDLP 
Sbjct:    86 TEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPD 145

Query:   203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
             GGHL+HGFMT K+++S TSI+FESMPY+++  TG ++YD LE+ A LF PKLIIAG S Y
Sbjct:   146 GGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLIIAGTSCY 205

Query:   263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
              R+ +Y R+R+IAD  GA LM DMAHISGLVAA VV  PF++C VVTTTTHK+LRG R G
Sbjct:   206 SRNLEYARLRKIADENGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTLRGCRAG 265

Query:   323 MIFFKK-----DPVLGVE----LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373
             MIF++K     DP  G E    LES IN+AVFPGLQGGPHNH I G+AV LK A + EFK
Sbjct:   266 MIFYRKGVKSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTLEFK 325

Query:   374 VYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN 433
             VYQ++VV+NCRAL+  L ELGYK+V+GGSDNHL+LVDLR  G DG R EK+L+  SI  N
Sbjct:   326 VYQHQVVANCRALSEALTELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACN 385

Query:   434 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQ-GSKL 492
             KN+ PGD+SAL P G+R+G+PA+T+RG  EK+F  +A FIH G+E+TL+ +      + L
Sbjct:   386 KNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDTGVRATL 445

Query:   493 QDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
             ++F   +    +     V  LR  VE+  + FP+PG+
Sbjct:   446 KEFKERLAGDKYQAA--VQALREEVESFASLFPLPGL 480

GO:0005739 "mitochondrion" evidence=IEA

GO:0008732 "L-allo-threonine aldolase activity" evidence=IEA

GO:0016597 "amino acid binding" evidence=IEA

GO:0019264 "glycine biosynthetic process from serine" evidence=IEA

GO:0051289 "protein homotetramerization" evidence=IEA

GO:0035999 "tetrahydrofolate interconversion" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0051262 "protein tetramerization" evidence=IDA

GO:0046655 "folic acid metabolic process" evidence=IDA;TAS

GO:0030170 "pyridoxal phosphate binding" evidence=IDA

GO:0005829 "cytosol" evidence=IDA;TAS

GO:0004372 "glycine hydroxymethyltransferase activity" evidence=IDA;TAS

GO:0006565 "L-serine catabolic process" evidence=IDA

GO:0009113 "purine nucleobase biosynthetic process" evidence=IDA

GO:0006766 "vitamin metabolic process" evidence=TAS

GO:0006767 "water-soluble vitamin metabolic process" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0045329 "carnitine biosynthetic process" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|Q5E9P9 SHMT1 "Serine hydroxymethyltransferase, cytosolic" [Bos taurus (taxid:9913)]

 Score = 1424 (506.3 bits), Expect = 9.3e-146, P = 9.3e-146
 Identities = 279/458 (60%), Positives = 342/458 (74%)

Query:    83 LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
             L + D EV  II KE  RQ   LELIASENF SRAV+EA+GSCL NKYSEG PG+RYYGG
Sbjct:    26 LKDNDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGG 85

Query:   143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
              E+IDELE LCQKRAL  + LD   WGVNVQP SGSPANF VYTA+++PH RIMGLDLP 
Sbjct:    86 TEFIDELEVLCQKRALQVYGLDSQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPD 145

Query:   203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
             GGHL+HGFMT K+++S TSI+FESMPY+++  TG ++YD LE+ A LF P+LIIAG S Y
Sbjct:   146 GGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPRLIIAGTSCY 205

Query:   263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
              R+ DY R+R+IAD  GA LM DMAH+SGLVAA VV  PF++C VV+TTTHK+LRG R G
Sbjct:   206 SRNLDYARLRKIADDNGAYLMADMAHVSGLVAAGVVPSPFEHCHVVSTTTHKTLRGCRAG 265

Query:   323 MIFFKK-----DPVLGVE----LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373
             MIF++K     DP  G E    LES IN+AVFPGLQGGPHNH I G+AV LK A +PEF+
Sbjct:   266 MIFYRKGVRSVDPKTGRETRYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFR 325

Query:   374 VYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN 433
              YQ +VV+NCRALA  L+ LGY++V+GGSDNHL+LVDLR  G DG R EK+L+  SI  N
Sbjct:   326 AYQRQVVANCRALAEALMGLGYRVVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACN 385

Query:   434 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSK-- 491
             KN+ PGDKSAL P G+R+G+PA+T+RG  E++F  +A FIH G+E+TL+ +  V G K  
Sbjct:   386 KNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKVAHFIHRGIELTLQIQDAV-GVKAT 444

Query:   492 LQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
             L++FM  +          VA LR  VE+  T FP+PG+
Sbjct:   445 LKEFMEKLAGAE-EHHRAVAALRAEVESFATLFPLPGL 481

GO:0035999 "tetrahydrofolate interconversion" evidence=IEA

GO:0051262 "protein tetramerization" evidence=IEA

GO:0046655 "folic acid metabolic process" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0009113 "purine nucleobase biosynthetic process" evidence=IEA

GO:0006565 "L-serine catabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004372 "glycine hydroxymethyltransferase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0006544 "glycine metabolic process" evidence=IEA

UNIPROTKB|Q3SZ20 SHMT2 "Serine hydroxymethyltransferase, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 1423 (506.0 bits), Expect = 1.2e-145, P = 1.2e-145
 Identities = 280/492 (56%), Positives = 354/492 (71%)

Query:    47 RCSSIEGSLVTGRXXXXXXXXIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLE 106
             RC  + G  V  +          E     S     SL ++DPE+ E++ +EK+RQ + LE
Sbjct:    15 RCGQLVGMAVRCQHSEAAQTQTGEASKGWSG--QESLSDSDPEMWELLRREKDRQCRGLE 72

Query:   107 LIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN 166
             LIASENF SRA +EA+GSCL NKYSEG PGKRYYGG E +DE+E LCQ+RAL AF+LD  
Sbjct:    73 LIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPA 132

Query:   167 KWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES 226
             +WGVNVQP SGSPAN   YTA+L+PHDRIMGLDLP GGHL+HG+M+  +R+S TSI+FES
Sbjct:   133 QWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFES 192

Query:   227 MPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 286
             MPY+L+  TGL+DYD L  TA LF+P+LIIAG SAY R  DY RMR++ D V A L+ DM
Sbjct:   193 MPYKLNPQTGLIDYDQLALTARLFKPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADM 252

Query:   287 AHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKK-----DPVLGVEL----E 337
             AHISGLVAA V+  PFK+ D+VTTTTHK+LRG R G+IF++K     DP  G E+    E
Sbjct:   253 AHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFYRKGVQAVDPKTGREIPYTFE 312

Query:   338 SAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL 397
               IN AVFP LQGGPHNH I  +AV LK A +P F+ Y  +++ N +A+A+ L+E GY L
Sbjct:   313 DRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQILKNAQAMANALLERGYSL 372

Query:   398 VSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMT 457
             VSGG+DNHLVLVDLRP G+DGAR E++L++ SIT NKN+ PGD+SA+ PGG+R+G+PA+T
Sbjct:   373 VSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALT 432

Query:   458 TRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTS-PNFSLMNNVADLRGR 516
             +RGF E +F  +  FI EGV I LE K   + +KLQDF +F+   P  S  + +ADLR R
Sbjct:   433 SRGFLEDDFRKVVGFIDEGVNIGLEVKS--KTTKLQDFKSFLLKDPETS--HQLADLRQR 488

Query:   517 VEALTTQFPIPG 528
             VE     FP+PG
Sbjct:   489 VEQFARAFPMPG 500

GO:0005743 "mitochondrial inner membrane" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0042645 "mitochondrial nucleoid" evidence=ISS

GO:0003682 "chromatin binding" evidence=ISS

GO:0035999 "tetrahydrofolate interconversion" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0004372 "glycine hydroxymethyltransferase activity" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0006563 "L-serine metabolic process" evidence=IEA

GO:0006544 "glycine metabolic process" evidence=IEA

UNIPROTKB|E2RIV3 SHMT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1422 (505.6 bits), Expect = 1.5e-145, P = 1.5e-145
 Identities = 275/457 (60%), Positives = 342/457 (74%)

Query:    83 LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
             L + D EV  II KE  RQ   LELIASENFTSRAV+EA+GSCL NKYSEG PG+RYYGG
Sbjct:    26 LKDNDTEVYNIIKKESNRQRVGLELIASENFTSRAVLEALGSCLNNKYSEGYPGQRYYGG 85

Query:   143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
              E+IDELE LCQKRAL  + LD   WGVNVQP SGSPANF VYTA+++PH RIMGLDLP 
Sbjct:    86 TEFIDELEILCQKRALQVYGLDPECWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPD 145

Query:   203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
             GGHL+HGFMT K+++S TSI+FESMPY+++  TG ++YD LE+ A LF PKLIIAG S Y
Sbjct:   146 GGHLTHGFMTDKKKISATSIFFESMPYKVNPETGYINYDQLEENARLFHPKLIIAGTSCY 205

Query:   263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
              R+ DY R+R+IAD  GA LM DMAHISGLVAA VV  PF++C VV+TTTHK+LRG R G
Sbjct:   206 SRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPSPFEHCHVVSTTTHKTLRGCRAG 265

Query:   323 MIFFKK-----DPVLGVE----LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373
             +IF+++     DP  G E    LES IN+AVFPGLQGGPHNH I G+AV LK A +PEF+
Sbjct:   266 IIFYRRGVRSVDPKTGKETLYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFR 325

Query:   374 VYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN 433
             +YQ++VV+NCR LA  L+ELGYK+V+GGSDNHL+LVDLR  G DG R EK+L+  SI  N
Sbjct:   326 LYQHQVVANCRVLAETLMELGYKVVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACN 385

Query:   434 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQG-SKL 492
             KN+ PGDKSAL P G+R+G+PA+T+RG  EKEF  +A F+H G+E+TL+ +  +   + L
Sbjct:   386 KNTCPGDKSALRPSGLRLGTPALTSRGLLEKEFQKVAQFVHRGIELTLQIQNDIGARATL 445

Query:   493 QDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
             ++F   +          +  LR  VE+  + FP+PG+
Sbjct:   446 KEFREKLAGDE-KHQRAIRALREEVESFASLFPLPGL 481

GO:0035999 "tetrahydrofolate interconversion" evidence=IEA

GO:0051262 "protein tetramerization" evidence=IEA

GO:0046655 "folic acid metabolic process" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0009113 "purine nucleobase biosynthetic process" evidence=IEA

GO:0006565 "L-serine catabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0006544 "glycine metabolic process" evidence=IEA

GO:0004372 "glycine hydroxymethyltransferase activity" evidence=IEA

UNIPROTKB|E1BS67 SHMT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1421 (505.3 bits), Expect = 1.9e-145, P = 1.9e-145
 Identities = 276/471 (58%), Positives = 346/471 (73%)

Query:    70 EIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNK 129
             E+    S  +   L   DPEV  II KEK+RQ   LELIASENF S AV+EA+GSCL NK
Sbjct:    15 ELWASHSKMLLEPLDSNDPEVYNIIKKEKQRQRLGLELIASENFASCAVLEALGSCLNNK 74

Query:   130 YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 189
             YSEG PG+RYYGG E++DELE LCQKRAL AF LD  KWGVNVQP SGSPANF VYTA++
Sbjct:    75 YSEGYPGQRYYGGTEFVDELERLCQKRALQAFRLDPQKWGVNVQPYSGSPANFAVYTALV 134

Query:   190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL 249
             +PH RIMGLDLP GGHL+HGFMT K+++S TS++FESMPY+++  TG +DYD LE+ A L
Sbjct:   135 EPHGRIMGLDLPDGGHLTHGFMTDKKKISATSVFFESMPYKVNPKTGYIDYDKLEENARL 194

Query:   250 FRPKLIIA-GASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVV 308
             F PKLIIA G S Y R+ DY RMRQIA+A  A LM DMAHISGLVAA VV  PF++CDVV
Sbjct:   195 FHPKLIIAAGVSCYSRNLDYARMRQIANANSAYLMADMAHISGLVAAGVVPSPFEHCDVV 254

Query:   309 TTTTHKSLRGPRGGMIFFKK-----DPVLGVE----LESAINNAVFPGLQGGPHNHTIGG 359
             +TTTHK+LRG R GMIF++K     DP  G E    LES IN AVFPGLQGGPHNH I G
Sbjct:   255 STTTHKTLRGCRAGMIFYRKGTRSTDPKTGKETLYNLESLINQAVFPGLQGGPHNHAIAG 314

Query:   360 LAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGA 419
             +AV L+ A +PEFK YQ +VV+NC+ LA+ L+E+GY +V+GGSDNHL+L+DLR  G DG 
Sbjct:   315 IAVALQQAMTPEFKAYQQQVVANCKTLAAALMEMGYDIVTGGSDNHLILLDLRNRGTDGG 374

Query:   420 RVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479
             R E++L++ SI  NKN+ PGD SAL P G+R G+PA+T+RGF + +F  +A +IH+G+E+
Sbjct:   375 RAERVLELCSIACNKNTCPGDVSALRPSGLRFGTPALTSRGFRQDDFRTVARYIHKGIEL 434

Query:   480 TLEAKK-LVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
             TL  +K +   + L++F   +    +     +  L+  VEA    FP+PG+
Sbjct:   435 TLRVQKDMNPKATLKEFKEKLEEEKYQ--GELKALKEEVEAFAATFPLPGL 483

GO:0004372 "glycine hydroxymethyltransferase activity" evidence=IEA

GO:0006544 "glycine metabolic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0035999 "tetrahydrofolate interconversion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006565 "L-serine catabolic process" evidence=IEA

GO:0009113 "purine nucleobase biosynthetic process" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0046655 "folic acid metabolic process" evidence=IEA

GO:0051262 "protein tetramerization" evidence=IEA

UNIPROTKB|P34897 SHMT2 "Serine hydroxymethyltransferase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 1421 (505.3 bits), Expect = 1.9e-145, P = 1.9e-145
 Identities = 274/456 (60%), Positives = 344/456 (75%)

Query:    82 SLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG 141
             SL ++DPE+ E++ +EK+RQ + LELIASENF SRA +EA+GSCL NKYSEG PGKRYYG
Sbjct:    48 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 107

Query:   142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP 201
             G E +DE+E LCQ+RAL AF+LD  +WGVNVQP SGSPAN  VYTA+L+PHDRIMGLDLP
Sbjct:   108 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLP 167

Query:   202 HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261
              GGHL+HG+M+  +R+S TSI+FESMPY+L+  TGL+DY+ L  TA LFRP+LIIAG SA
Sbjct:   168 DGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSA 227

Query:   262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG 321
             Y R  DY RMR++ D V A L+ DMAHISGLVAA V+  PFK+ D+VTTTTHK+LRG R 
Sbjct:   228 YARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARS 287

Query:   322 GMIFFKK-----DPVLGVEL----ESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372
             G+IF++K     DP  G E+    E  IN AVFP LQGGPHNH I  +AV LK A +P F
Sbjct:   288 GLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMF 347

Query:   373 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITL 432
             + Y  +V+ N RA+A  L+E GY LVSGG+DNHLVLVDLRP G+DGAR E++L++ SIT 
Sbjct:   348 REYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITA 407

Query:   433 NKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKL 492
             NKN+ PGD+SA+ PGG+R+G+PA+T+R F E +F  + DFI EGV I LE K   + +KL
Sbjct:   408 NKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKS--KTAKL 465

Query:   493 QDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 528
             QDF +F+   +      +A+LR RVE     FP+PG
Sbjct:   466 QDFKSFLLKDS-ETSQRLANLRQRVEQFARAFPMPG 500

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0005758 "mitochondrial intermembrane space" evidence=IEA

GO:0006564 "L-serine biosynthetic process" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0008732 "L-allo-threonine aldolase activity" evidence=IEA

GO:0016597 "amino acid binding" evidence=IEA

GO:0019264 "glycine biosynthetic process from serine" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0051289 "protein homotetramerization" evidence=IEA

GO:0035999 "tetrahydrofolate interconversion" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0004372 "glycine hydroxymethyltransferase activity" evidence=IDA

GO:0006730 "one-carbon metabolic process" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=IDA

GO:0005743 "mitochondrial inner membrane" evidence=IDA

GO:0003682 "chromatin binding" evidence=IDA

GO:0042645 "mitochondrial nucleoid" evidence=IDA

GO:0015630 "microtubule cytoskeleton" evidence=IDA

UNIPROTKB|F1SL74 LOC100626911 "Serine hydroxymethyltransferase" [Sus scrofa (taxid:9823)]

 Score = 1421 (505.3 bits), Expect = 1.9e-145, P = 1.9e-145
 Identities = 276/456 (60%), Positives = 342/456 (75%)

Query:    82 SLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG 141
             SL ++DPE+ E++ +EK+RQ + LELIASENF SRA +EA+GSCL NKYSEG PGKRYYG
Sbjct:    48 SLSDSDPEMWELLRREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 107

Query:   142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP 201
             G E +DE+E LCQ+RAL AF+LD  +WGVNVQP SGSPAN   YTA+L+PHDRIMGLDLP
Sbjct:   108 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLP 167

Query:   202 HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261
              GGHL+HG+MT  +R+S TSI+FESMPY+L+  TGL+DYD L  TA LFRP+LIIAG SA
Sbjct:   168 DGGHLTHGYMTDVKRISATSIFFESMPYKLNPKTGLIDYDQLALTARLFRPRLIIAGTSA 227

Query:   262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG 321
             Y R  DY RMR++ D V A L+ DMAHISGLVAA V+  PF++ DVVTTTTHK+LRG R 
Sbjct:   228 YARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFEHADVVTTTTHKTLRGARS 287

Query:   322 GMIFFKK-----DPVLGVEL----ESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372
             G+IF++K     DP  G E+    E  IN AVFP LQGGPHNH I  +AV LK A +P F
Sbjct:   288 GLIFYRKGVRTVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMF 347

Query:   373 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITL 432
             + Y  +V+ N RA+A  L+E GY LVSGG+DNHLVLVDLRP G+DGARVE++L++ SIT 
Sbjct:   348 REYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARVERVLELVSITA 407

Query:   433 NKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKL 492
             NKN+ PGD+SA+ PGG+R+G+PA+T+R F E +F  +  FI EGV I LE K   + +KL
Sbjct:   408 NKNTCPGDRSAITPGGLRLGTPALTSRQFREDDFRKVVAFIDEGVSIGLEVKS--KTTKL 465

Query:   493 QDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 528
             QDF +F+          +ADLR RVE     FP+PG
Sbjct:   466 QDFKSFLLKDP-ETCRRLADLRQRVEQFARAFPMPG 500

GO:0035999 "tetrahydrofolate interconversion" evidence=IEA

GO:0004372 "glycine hydroxymethyltransferase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0006563 "L-serine metabolic process" evidence=IEA

GO:0006544 "glycine metabolic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P34898	GLYC_NEUCR	2, ., 1, ., 2, ., 1	0.5952	0.8468	0.9333	N/A	no
P34899	GLYM_PEA	2, ., 1, ., 2, ., 1	0.6155	0.8336	0.8513	N/A	no
Q75BQ6	GLYC_ASHGO	2, ., 1, ., 2, ., 1	0.5531	0.8431	0.9509	yes	no
P37291	GLYC_YEAST	2, ., 1, ., 2, ., 1	0.6014	0.7807	0.8805	yes	no
Q60V73	GLYC_CAEBR	2, ., 1, ., 2, ., 1	0.6084	0.8279	0.8571	N/A	no
B0K742	GLYA_THEP3	2, ., 1, ., 2, ., 1	0.5333	0.7069	0.9055	yes	no
Q3K5K9	GLYA3_PSEPF	2, ., 1, ., 2, ., 1	0.5103	0.7069	0.8968	yes	no
B1I6M4	GLYA_DESAP	2, ., 1, ., 2, ., 1	0.5419	0.7126	0.9084	yes	no
Q3A934	GLYA_CARHZ	2, ., 1, ., 2, ., 1	0.5125	0.7221	0.9073	yes	no
P35623	GLYC_SHEEP	2, ., 1, ., 2, ., 1	0.6061	0.8431	0.9214	N/A	no
B9LKK8	GLYA_CHLSY	2, ., 1, ., 2, ., 1	0.5152	0.7145	0.9021	yes	no
B8E008	GLYA_DICTD	2, ., 1, ., 2, ., 1	0.5177	0.7145	0.9130	yes	no
P14519	GLYM_RABIT	2, ., 1, ., 2, ., 1	0.6039	0.8374	0.8789	yes	no
Q8R887	GLYA_THETN	2, ., 1, ., 2, ., 1	0.5358	0.7069	0.9055	yes	no
B0K631	GLYA_THEPX	2, ., 1, ., 2, ., 1	0.5333	0.7069	0.9055	yes	no
A4XL61	GLYA_CALS8	2, ., 1, ., 2, ., 1	0.5126	0.7145	0.9064	yes	no
O62585	GLYC_ENCCU	2, ., 1, ., 2, ., 1	0.5044	0.8260	0.95	yes	no
P50432	GLYC_CAEEL	2, ., 1, ., 2, ., 1	0.6079	0.8317	0.8678	yes	no
P50433	GLYM_SOLTU	2, ., 1, ., 2, ., 1	0.6244	0.8336	0.8513	N/A	no
P34897	GLYM_HUMAN	2, ., 1, ., 2, ., 1	0.6008	0.8393	0.8809	yes	no
Q5E9P9	GLYC_BOVIN	2, ., 1, ., 2, ., 1	0.6061	0.8431	0.9214	yes	no
A8MGL7	GLYA_ALKOO	2, ., 1, ., 2, ., 1	0.5216	0.7126	0.9195	yes	no
Q6FUP6	GLYC_CANGA	2, ., 1, ., 2, ., 1	0.5604	0.8317	0.9381	yes	no
O13425	GLYM_CANAX	2, ., 1, ., 2, ., 1	0.5615	0.8544	0.9168	N/A	no
P49357	GLYM_FLAPR	2, ., 1, ., 2, ., 1	0.6111	0.8317	0.8510	N/A	no
O13426	GLYC_CANAL	2, ., 1, ., 2, ., 1	0.5802	0.8317	0.9361	N/A	no
B9MR57	GLYA_CALBD	2, ., 1, ., 2, ., 1	0.5229	0.7107	0.9060	yes	no
O66776	GLYA_AQUAE	2, ., 1, ., 2, ., 1	0.5183	0.7334	0.9065	yes	no
P49358	GLYN_FLAPR	2, ., 1, ., 2, ., 1	0.6230	0.8298	0.8491	N/A	no
Q54Z26	GLYC1_DICDI	2, ., 1, ., 2, ., 1	0.5912	0.8317	0.9628	yes	no
Q10104	GLYM_SCHPO	2, ., 1, ., 2, ., 1	0.5842	0.8355	0.9057	yes	no
Q4K4P6	GLYA2_PSEF5	2, ., 1, ., 2, ., 1	0.5077	0.7069	0.8968	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.1.2	0.963
4th Layer	2.1.2.1	0.946

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	529
PLN03226	475	PLN03226, PLN03226, serine hydroxymethyltransferas	0.0
PTZ00094	452	PTZ00094, PTZ00094, serine hydroxymethyltransferas	0.0
pfam00464	380	pfam00464, SHMT, Serine hydroxymethyltransferase	0.0
cd00378	402	cd00378, SHMT, Serine-glycine hydroxymethyltransfe	0.0
COG0112	413	COG0112, GlyA, Glycine/serine hydroxymethyltransfe	0.0
PRK00011	416	PRK00011, glyA, serine hydroxymethyltransferase; R	0.0
PLN02271	586	PLN02271, PLN02271, serine hydroxymethyltransferas	0.0
PRK13034	416	PRK13034, PRK13034, serine hydroxymethyltransferas	0.0
PRK13580	493	PRK13580, PRK13580, serine hydroxymethyltransferas	1e-122
cd01494	170	cd01494, AAT_I, Aspartate aminotransferase (AAT) s	2e-26
cd00609	350	cd00609, AAT_like, Aspartate aminotransferase fami	1e-05
COG0520	405	COG0520, csdA, Selenocysteine lyase/Cysteine desul	4e-05
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	0.002

>gnl|CDD|215639 PLN03226, PLN03226, serine hydroxymethyltransferase; Provisional

 Score =  899 bits (2325), Expect = 0.0
 Identities = 320/469 (68%), Positives = 370/469 (78%), Gaps = 11/469 (2%)

Query: 69  PEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTN 128
            +       + +  L E DPE+ +II KEK RQ+K LELIASENFTSRAVMEA+GSCLTN
Sbjct: 1   EKSMVSVPKWGNAPLEEVDPEIADIIEKEKRRQWKGLELIASENFTSRAVMEALGSCLTN 60

Query: 129 KYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188
           KYSEGLPG RYYGGNEYID++ETLCQKRAL AF LD  KWGVNVQPLSGSPANF VYTA+
Sbjct: 61  KYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTAL 120

Query: 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAI 248
           L+PHDRIMGLDLPHGGHLSHG+ T  +++S TSIYFESMPYRLDESTGL+DYD LEK A+
Sbjct: 121 LQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAM 180

Query: 249 LFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVV 308
           LFRPKLIIAGASAYPRD+DY RMR+IAD VGALLM DMAHISGLVAA   A PF+YCDVV
Sbjct: 181 LFRPKLIIAGASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVV 240

Query: 309 TTTTHKSLRGPRGGMIFFKKDPVLG--------VELESAINNAVFPGLQGGPHNHTIGGL 360
           TTTTHKSLRGPRGGMIFF+K P            + E  IN AVFPGLQGGPHNHTI  L
Sbjct: 241 TTTTHKSLRGPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAAL 300

Query: 361 AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGAR 420
           AV LK A +PEFK YQ +V +N  ALA+RL+  GYKLV+GG+DNHLVL DLRP+G+ G+R
Sbjct: 301 AVALKQAMTPEFKAYQKQVKANAAALANRLMSKGYKLVTGGTDNHLVLWDLRPLGLTGSR 360

Query: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480
           VEK+LD+A ITLNKN+VPGD SALVPGG+RIG+PAMT+RG  EK+F  +A+F+H  V I 
Sbjct: 361 VEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTIA 420

Query: 481 LEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
           L+ +K   G KL+DF   + S +FS   ++  LR  VE   T FP+PG 
Sbjct: 421 LKIQK-EHGKKLKDFKKGLESNDFS--KDIEALRAEVEEFATSFPMPGF 466

Length = 475

>gnl|CDD|240264 PTZ00094, PTZ00094, serine hydroxymethyltransferase; Provisional

 Score =  763 bits (1972), Expect = 0.0
 Identities = 282/448 (62%), Positives = 345/448 (77%), Gaps = 11/448 (2%)

Query: 82  SLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG 141
           SL EADPE+ E+I KEKERQ + LELIASENFTSRAV+E +GSC TNKY+EGLPG RYYG
Sbjct: 14  SLKEADPELYELIEKEKERQIEGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYG 73

Query: 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP 201
           GNE +D++E LCQKRAL AF LD  +WGVNVQP SGSPANF VYTA+L+PHDRIMGLDLP
Sbjct: 74  GNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLP 133

Query: 202 HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261
            GGHL+HGF T K++VS TSIYFES+PY+++E  GL+DYD LE+ A  FRPKLIIAGASA
Sbjct: 134 SGGHLTHGFYTAKKKVSATSIYFESLPYQVNE-KGLIDYDKLEELAKAFRPKLIIAGASA 192

Query: 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG 321
           YPRD DY R R+I D+VGA LM D+AH SGLVAA V+  PF Y DVVTTTTHKSLRGPR 
Sbjct: 193 YPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGPRS 252

Query: 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 381
           G+IF++K   +  ++E+ IN AVFPGLQGGPHNH I  +AV LK  QSPE+K Y  +V+ 
Sbjct: 253 GLIFYRKK--VKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLK 310

Query: 382 NCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK 441
           N +ALA+ L + GY LV+GG+DNHLVLVDLRP GI G+++EK+LD  +I++NKN++PGDK
Sbjct: 311 NAKALAAALEKRGYDLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDK 370

Query: 442 SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFM-NFVT 500
           SAL P G+R+G+PA+TTRG  EK+F  +ADF+   V++  E +K V G KL DF      
Sbjct: 371 SALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLAQEIQKQV-GKKLVDFKKALEK 429

Query: 501 SPNFSLMNNVADLRGRVEALTTQFPIPG 528
           +P       +  LR  V    +QFP PG
Sbjct: 430 NP------ELQKLRQEVVEFASQFPFPG 451

Length = 452

>gnl|CDD|189558 pfam00464, SHMT, Serine hydroxymethyltransferase

 Score =  663 bits (1713), Expect = 0.0
 Identities = 254/392 (64%), Positives = 299/392 (76%), Gaps = 13/392 (3%)

Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           L ++DPE+ +II KEKERQ + +ELIASENFTSRAVMEA+GS LTNKY+EG PGKRYYGG
Sbjct: 1   LSDSDPEIFDIIKKEKERQREGIELIASENFTSRAVMEALGSVLTNKYAEGYPGKRYYGG 60

Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
            EY+DE+ETL Q RA   F LD    GVNVQPLSGS AN  VYTA+L P DRIMGLDLPH
Sbjct: 61  CEYVDEVETLAQDRAKELFGLD----GVNVQPLSGSQANLAVYTALLNPGDRIMGLDLPH 116

Query: 203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
           GGHL+HG+         +  +FESMPY +D  TGL+DYD LEK A LF+PKLI+AG SAY
Sbjct: 117 GGHLTHGYPVNF-----SGKFFESMPYGVDPDTGLIDYDQLEKNAKLFKPKLIVAGTSAY 171

Query: 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
            R  DY R R+IAD VGA LM+DMAHI+GLVAA V+  PF Y  VVTTTTHK+LRGPRGG
Sbjct: 172 SRLIDYARFREIADEVGAYLMVDMAHIAGLVAAGVIPSPFPYAHVVTTTTHKTLRGPRGG 231

Query: 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382
           MIFF++      ELE  IN+AVFPGLQGGP NH I   AV LK A +PEFKVYQ +V+ N
Sbjct: 232 MIFFREIL---YELEKKINSAVFPGLQGGPLNHVIAAKAVALKQALTPEFKVYQQQVLKN 288

Query: 383 CRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-K 441
            +ALA  L E GYKLVSGG+DNHLVLVDLRP G+DG R EK L+ A+IT NKN++PGD K
Sbjct: 289 AKALAEALKERGYKLVSGGTDNHLVLVDLRPKGLDGKRAEKALERANITANKNTIPGDPK 348

Query: 442 SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473
           S  V  G+R+G+PA+T+RGF E +F  +A +I
Sbjct: 349 SPFVTSGLRLGTPALTSRGFGEADFEEVAGYI 380

Length = 380

>gnl|CDD|99733 cd00378, SHMT, Serine-glycine hydroxymethyltransferase (SHMT)

 Score =  650 bits (1679), Expect = 0.0
 Identities = 238/403 (59%), Positives = 284/403 (70%), Gaps = 13/403 (3%)

Query: 85  EADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNE 144
           + DPE+ EII KE ERQ ++LELIASENFTS AVMEA+GS LTNKY+EG PGKRYYGG E
Sbjct: 2   DVDPEIAEIIKKENERQRETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCE 61

Query: 145 YIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGG 204
           Y+DE+E L  +RA   F  +      NVQP SGS AN  VY A+L+P D IMGLDL HGG
Sbjct: 62  YVDEIEDLAIERAKKLFGAE----YANVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGG 117

Query: 205 HLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 264
           HL+HG  T   +VS +   FES+PY +D  TGL+DYD LEK A+ F+PKLI+AGASAYPR
Sbjct: 118 HLTHGSFT---KVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYPR 174

Query: 265 DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMI 324
             D+ R R+IAD VGA L++DMAH++GLVA  V  +P    DVVTTTTHK+LRGPRGG+I
Sbjct: 175 PIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRGGLI 234

Query: 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 384
             +K      EL   IN+AVFPGLQGGPH H I   AV LK A  PEFK Y  +VV N +
Sbjct: 235 LTRKG-----ELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAK 289

Query: 385 ALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKS-A 443
           ALA  L E G+K+VSGG+DNHLVLVDLRP GI G   E  L+ A IT+NKN++P D S  
Sbjct: 290 ALAEALKERGFKVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSP 349

Query: 444 LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKL 486
            VP GIRIG+PAMTTRG  E+E   IADFI   ++   +    
Sbjct: 350 FVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKDAEDVAVA 392

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites. Length = 402

>gnl|CDD|223190 COG0112, GlyA, Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

 Score =  618 bits (1597), Expect = 0.0
 Identities = 231/453 (50%), Positives = 284/453 (62%), Gaps = 41/453 (9%)

Query: 77  SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPG 136
           S    SL + DPE+ E I +E ERQ + +ELIASENFTS AVMEA GS LTNKY+EG PG
Sbjct: 1   SRSYASLADYDPEIFEAIQQELERQREHIELIASENFTSPAVMEAQGSDLTNKYAEGYPG 60

Query: 137 KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIM 196
           KRYYGG EY+DE+E L  +RA   F  +      NVQP SGS AN  VY A+L+P D IM
Sbjct: 61  KRYYGGCEYVDEVEELAIERAKKLFGAE----YANVQPHSGSQANQAVYLALLQPGDTIM 116

Query: 197 GLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256
           GLDL HGGHL+HG       V+ +   F  + Y +D  TGL+DYD +EK A   +PKLII
Sbjct: 117 GLDLSHGGHLTHG-----SPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLII 171

Query: 257 AGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL 316
           AG SAY R  D+ R R+IAD VGA LM+DMAH++GL+A  V  +P  + DVVTTTTHK+L
Sbjct: 172 AGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTL 231

Query: 317 RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376
           RGPRGG+I    +     EL   IN+AVFPGLQGGP  H I   AV  K A  PEFK Y 
Sbjct: 232 RGPRGGIILTNDE-----ELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYA 286

Query: 377 NKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNS 436
            +VV N +ALA  L E G+K+VSGG+DNHLVLVDLR  G+ G + E  L+ A IT+NKN+
Sbjct: 287 KQVVKNAKALAEALKERGFKVVSGGTDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNA 346

Query: 437 VPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDF 495
           +P D +S  V  GIRIG+PA+TTRGF E E   IAD I +     L+  K V        
Sbjct: 347 IPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIAD----VLDGLKDV-------- 394

Query: 496 MNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 528
                          A+++  V  L  +FP+  
Sbjct: 395 --------------PAEVKEEVAELCRRFPLYK 413

Length = 413

>gnl|CDD|234571 PRK00011, glyA, serine hydroxymethyltransferase; Reviewed

 Score =  608 bits (1571), Expect = 0.0
 Identities = 224/448 (50%), Positives = 283/448 (63%), Gaps = 39/448 (8%)

Query: 82  SLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG 141
           +L E DPE+ + I +E +RQ + +ELIASENF S AVMEA GS LTNKY+EG PGKRYYG
Sbjct: 5   NLAEYDPEIADAIEQELKRQEEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYG 64

Query: 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP 201
           G EY+D +E L   RA   F  +      NVQP SGS AN  VY A+LKP D I+G+DL 
Sbjct: 65  GCEYVDVVEQLAIDRAKELFGAEY----ANVQPHSGSQANAAVYFALLKPGDTILGMDLA 120

Query: 202 HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261
           HGGHL+HG       V+ +   +  + Y +DE TGL+DYD +EK A+  +PKLIIAGASA
Sbjct: 121 HGGHLTHG-----SPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGASA 175

Query: 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG 321
           Y R  D+ R R+IAD VGA LM+DMAHI+GLVAA V   P  + DVVTTTTHK+LRGPRG
Sbjct: 176 YSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTLRGPRG 235

Query: 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 381
           G+I    +     EL   IN+AVFPG+QGGP  H I   AV  K A  PEFK Y  +VV 
Sbjct: 236 GLILTNDE-----ELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVK 290

Query: 382 NCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD- 440
           N +ALA  L E G+++VSGG+DNHLVLVDLR  G+ G   E  L+ A+IT+NKN+VP D 
Sbjct: 291 NAKALAEALAERGFRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDP 350

Query: 441 KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVT 500
           +S  V  GIRIG+PA+TTRGF E E   IA+ I + ++                      
Sbjct: 351 RSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLD---------------------- 388

Query: 501 SPNFSLMNNVADLRGRVEALTTQFPIPG 528
             N      + +++  V+ L  +FP+  
Sbjct: 389 --NPDDEAVIEEVKEEVKELCKRFPLYK 414

Length = 416

>gnl|CDD|215153 PLN02271, PLN02271, serine hydroxymethyltransferase

 Score =  597 bits (1540), Expect = 0.0
 Identities = 254/466 (54%), Positives = 327/466 (70%), Gaps = 25/466 (5%)

Query: 80  DYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRY 139
           +  L EADP++ E++ KEK+RQFK +ELIASENF  RAVMEA+GS LTNKYSEG+PG RY
Sbjct: 126 NQPLPEADPDIHELMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARY 185

Query: 140 YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLD 199
           Y GN+YID++E LC +RALAAF LD  KWGVNVQP S + ANF VYT +L P DRIMGLD
Sbjct: 186 YTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLD 245

Query: 200 LPHGGHLSHGFMTPK-RRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258
            P GGH+SHG+ TP  ++VSG SI+FES+PY+++  TG +DYD LE+ A+ FRPK++I G
Sbjct: 246 SPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILICG 305

Query: 259 ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG 318
            S+YPR++DY R RQIAD  GA+LM DMAHISGLVAA    +PF YCD+VT+TTHKSLRG
Sbjct: 306 GSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSLRG 365

Query: 319 PRGGMIFFKKDPVL---------GVE-----LESAINNAVFPGLQGGPHNHTIGGLAVCL 364
           PRGG+IF++K P L         G +      E  IN AVFP LQGGPHN+ I  LA+ L
Sbjct: 366 PRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIAL 425

Query: 365 KHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKI 424
           K   +PE+K Y  +V  N +ALAS L+    +LV+GG+DNHL+L DL  +G+ G   EK+
Sbjct: 426 KQVATPEYKAYMQQVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLTTLGLTGKNYEKV 485

Query: 425 LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAK 484
            +M  ITLNK ++ GD   + PGG+RIG+PAMT+RG  E +F  IADF+    +I    +
Sbjct: 486 CEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQIASAVQ 545

Query: 485 KLVQGSKLQDFMNFVTSPNFSLMNN--VADLRGRVEALTTQFPIPG 528
           +   G   ++F+         L NN  + +LR RVEA  +QF +PG
Sbjct: 546 R-EHGKLQKEFLK-------GLQNNKDIVELRNRVEAFASQFAMPG 583

Length = 586

>gnl|CDD|237280 PRK13034, PRK13034, serine hydroxymethyltransferase; Reviewed

 Score =  534 bits (1379), Expect = 0.0
 Identities = 236/453 (52%), Positives = 291/453 (64%), Gaps = 39/453 (8%)

Query: 76  SSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLP 135
             F   SL E D EV   I KE ERQ   LELIASENFTS AVMEA GS LTNKY+EG P
Sbjct: 2   MFFFSDSLEEYDDEVFAAINKELERQQDHLELIASENFTSPAVMEAQGSVLTNKYAEGYP 61

Query: 136 GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRI 195
           GKRYYGG E++DE+E L  +RA   F  D      NVQP SGS AN  VY A+LKP D I
Sbjct: 62  GKRYYGGCEFVDEVEALAIERAKQLFGCDY----ANVQPHSGSQANGAVYLALLKPGDTI 117

Query: 196 MGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255
           +G+ L HGGHL+HG      +VS +  ++ ++ Y +D  TGL+DYD +E+ A   +PKLI
Sbjct: 118 LGMSLSHGGHLTHG-----AKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLI 172

Query: 256 IAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKS 315
           IAG SAYPR+ D+ R R+IAD VGALLM+DMAHI+GLVAA    +PF +  VVTTTTHK+
Sbjct: 173 IAGFSAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKT 232

Query: 316 LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375
           LRGPRGGMI    +     E+   IN+AVFPGLQGGP  H I   AV    A  PEFK Y
Sbjct: 233 LRGPRGGMILTNDE-----EIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTY 287

Query: 376 QNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKN 435
             +V++N +ALA  L E GY LVSGG+DNHL+LVDLRP G+ G   E+ L+ A IT+NKN
Sbjct: 288 AKQVIANAQALAEVLKERGYDLVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKN 347

Query: 436 SVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQD 494
           +VPGD +S  V  GIRIG+PA TTRGF E EF  IA++I +     L+    +  + L+ 
Sbjct: 348 TVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILD----VLDD---LGNAALE- 399

Query: 495 FMNFVTSPNFSLMNNVADLRGRVEALTTQFPIP 527
                             +R  V+AL ++FPI 
Sbjct: 400 ----------------QRVRKEVKALCSRFPIY 416

Length = 416

>gnl|CDD|184161 PRK13580, PRK13580, serine hydroxymethyltransferase; Provisional

 Score =  367 bits (944), Expect = e-122
 Identities = 180/485 (37%), Positives = 257/485 (52%), Gaps = 64/485 (13%)

Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           +   +P + E I +E   Q  SL+LIASEN++S AV  A+G+ LT+KY+EG PG R+Y G
Sbjct: 30  ILHVEPRIAEAIRQELADQRSSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAG 89

Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH---------- 192
            + +D +E    + A   F  +       VQP SG+ AN   + AIL             
Sbjct: 90  CQNVDTVEWEAAEHAKELFGAEH----AYVQPHSGADANLVAFWAILAHKVESPALEKLG 145

Query: 193 ---------------------DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231
                                 R++G+ L  GGHL+HGF     R + +   F    Y +
Sbjct: 146 AKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGF-----RPNISGKMFHQRSYGV 200

Query: 232 DESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISG 291
           D  TGL+DYD +   A  F+P +++AG SAYPR  ++ ++R+IAD VGA+LM+DMAH +G
Sbjct: 201 DPDTGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVDMAHFAG 260

Query: 292 LVAASVVA---DPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL 348
           LVA  V     DP  + D+VTTTTHK+LRGPRGG++  KK      E   A++    P +
Sbjct: 261 LVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRGGLVLAKK------EYADAVDKGC-PLV 313

Query: 349 QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408
            GGP  H +   AV L  A++PEF+ Y  +VV N RALA   ++ G +LV+GG+DNHLVL
Sbjct: 314 LGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVL 373

Query: 409 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKS-ALVPGGIRIGSPAMTTRGFSEKEFV 467
           +D+   G+ G + E  L  A I  N+NS+P D + A    GIR+G+PA+TT G    E  
Sbjct: 374 IDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMD 433

Query: 468 AIADFIHEGVE-ITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVAD-LRGRVEALTTQFP 525
            +A+ I + +   T         SK      +           VA  +R RV  L  +FP
Sbjct: 434 EVAELIVKVLSNTTPGTTAEGAPSK----AKYELDE------GVAQEVRARVAELLARFP 483

Query: 526 I-PGV 529
           + P +
Sbjct: 484 LYPEI 488

Length = 493

>gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

 Score =  105 bits (264), Expect = 2e-26
 Identities = 44/182 (24%), Positives = 70/182 (38%), Gaps = 15/182 (8%)

Query: 149 LETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSH 208
                +++                 P SG+ AN     A+L P D ++     HG     
Sbjct: 1   KLEELEEKLARLLQ--PGNDKAVFVP-SGTGANEAALLALLGPGDEVIVDANGHGSRY-- 55

Query: 209 GFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPKLIIAGASAYPRDFD 267
                   V+      + +P  +D++  G +D  +LE+        LI+   +       
Sbjct: 56  -------WVAAELAGAKPVPVPVDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVL 108

Query: 268 YP--RMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIF 325
            P   +R+IA   G LL++D A   G   A  V  P    DVVT + HK+L G  GG++ 
Sbjct: 109 VPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFSLHKNLGGEGGGVVI 168

Query: 326 FK 327
            K
Sbjct: 169 VK 170

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V). Length = 170

>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family

 Score = 47.0 bits (112), Expect = 1e-05
 Identities = 64/334 (19%), Positives = 117/334 (35%), Gaps = 43/334 (12%)

Query: 135 PGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGV---NVQPLSGS-PANFEVYTAILK 190
            G   Y  +  + EL     + A+A +        V    +   +G+  A   +  A+L 
Sbjct: 27  AGLLGYYPDPGLPEL-----REAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLN 81

Query: 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF 250
           P D ++   +P   +  +       R++G  +     P  LDE  G +    L + A   
Sbjct: 82  PGDEVL---VPDPTYPGYEAAA---RLAGAEVV----PVPLDEEGGFLLDLELLEAAKTP 131

Query: 251 RPKLIIAGASAYP--RDFDYPRMRQIADAV---GALLMMDMAHISGLVAASVVADPFKYC 305
           + KL+       P         + ++A+     G L++ D A+ + LV            
Sbjct: 132 KTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAY-AELVYDGEPPPALALL 190

Query: 306 D-----VVTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIG 358
           D     +V  +  K+   P  R G +    + +L           + P    GP   +  
Sbjct: 191 DAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELL------ERLKKLLPYTTSGPSTLSQA 244

Query: 359 GLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDG 418
             A  L   +    +  + +      AL   L ELG  +V   S    + +DL   G D 
Sbjct: 245 AAAAALDDGEE-HLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPE-GDDE 302

Query: 419 ARVEKILDMASITLNKNSVPGDKSALVPGGIRIG 452
             +E++L  A + +   S  G+      G +R+ 
Sbjct: 303 EFLERLLLEAGVVVRPGSAFGEGG---EGFVRLS 333

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein. Length = 350

>gnl|CDD|223594 COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

 Score = 45.8 bits (109), Expect = 4e-05
 Identities = 44/233 (18%), Positives = 84/233 (36%), Gaps = 27/233 (11%)

Query: 266 FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMI 324
                + ++A   GAL+++D A  +G +   V       CD +  + HK L GP G G++
Sbjct: 179 NPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQEL---GCDFLAFSGHKWLLGPTGIGVL 235

Query: 325 FFKKD-------PVLGVELESAINNAVFPGLQGGPHN------HTIG--GLAVCLKHAQS 369
           + +K+        + G  +   ++      L   P        +  G  GLA  L +   
Sbjct: 236 YVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLE 295

Query: 370 PEFKVYQNKVVSNCRALASRLVELGYKLVSG-GSDNHLVLVDLRPMGIDGARVEKILDMA 428
              +  +         L   L EL    + G    +   +V     GI    V  +LD  
Sbjct: 296 IGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEK 355

Query: 429 SITL---NKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478
            I +   +  + P  +   V   IR  S  +     +E++   + + + + + 
Sbjct: 356 GIAVRAGHHCAQPLHRLLGVDATIRA-SLHLYN---TEEDVDRLLEALKKALA 404

Length = 405

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score = 40.4 bits (95), Expect = 0.002
 Identities = 64/348 (18%), Positives = 112/348 (32%), Gaps = 66/348 (18%)

Query: 140 YGGNEYIDELETLCQKRALAAFNLDENKWG----VNVQPLSGSPANFEVYTAILK--PHD 193
           YG  + + EL       ALA F              V   SG+ AN E    +L+  P D
Sbjct: 37  YGPTDGLPELRE-----ALAKFLGRSPVLKLDREAAVVFGSGAGANIEALIFLLRLNPGD 91

Query: 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEK--TAILF 250
            I+     +  +    F     R++G     E + Y L   +   +D+D LE        
Sbjct: 92  AILVPAPTYPSY-IRIF-----RLAG----GEVVRYPLYSSNDFHLDFDALEAALKEATE 141

Query: 251 RPKLIIAG------ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLV-----AASVVA 299
             K+++         +    + +  ++  +A     LL++D A+  G V     A +  A
Sbjct: 142 GNKVVLHTSPHNPTGTVATLE-ELEKLLDLAKEHNILLLVDEAYA-GFVFGSLDAVATRA 199

Query: 300 DPFKYCDVVTTTT-HKS--LRGPRGGMIFFKKDPVLGV-ELESAINNAVFPGLQGGPHNH 355
              +  +++   +  K+  L G R G I       LG   + S +           P   
Sbjct: 200 LLAEGPNLLVVGSFSKAFGLAGWRVGYI-------LGNAAVISQLRKLA------RPFYS 246

Query: 356 TIGGLAVCLKHAQSPEFKVYQNK-----VVSNCRALASRLVELGYKLVSGGSDNHLVLVD 410
           +    A        P     + +     +      L   L   G  ++   S     L+ 
Sbjct: 247 STHLQAAAAAALSDPLLVASELEEMRQRIKERRDYLRDGLEAAGLSVL--PSQAGFFLLT 304

Query: 411 LRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTT 458
                   A  + +L+   + +   S  G      PG +RI     T 
Sbjct: 305 GLDPEAALALAQVLLEEVGVYVTPGSSFG-----GPGWLRITVAGGTE 347

Length = 357

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	529
KOG2467	477	consensus Glycine/serine hydroxymethyltransferase	100.0
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	100.0
PLN02271	586	serine hydroxymethyltransferase	100.0
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	100.0
PLN03226	475	serine hydroxymethyltransferase; Provisional	100.0
PRK13580	493	serine hydroxymethyltransferase; Provisional	100.0
PTZ00094	452	serine hydroxymethyltransferase; Provisional	100.0
PRK13034	416	serine hydroxymethyltransferase; Reviewed	100.0
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	100.0
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	100.0
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	100.0
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	100.0
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	99.97
PRK10874	401	cysteine sulfinate desulfinase; Provisional	99.96
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	99.96
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	99.96
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	99.96
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	99.96
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	99.96
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	99.96
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	99.96
PLN02409	401	serine--glyoxylate aminotransaminase	99.96
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	99.96
PLN00175	413	aminotransferase family protein; Provisional	99.96
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.95
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.95
PRK02948	381	cysteine desulfurase; Provisional	99.95
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.95
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	99.95
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.95
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.95
KOG0257	420	consensus Kynurenine aminotransferase, glutamine t	99.95
PRK08960	387	hypothetical protein; Provisional	99.95
PRK07366	388	succinyldiaminopimelate transaminase; Validated	99.95
PRK07681	399	aspartate aminotransferase; Provisional	99.95
PRK12414	384	putative aminotransferase; Provisional	99.95
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.94
PLN02651	364	cysteine desulfurase	99.94
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.94
PRK06108	382	aspartate aminotransferase; Provisional	99.94
PRK08361	391	aspartate aminotransferase; Provisional	99.94
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	99.94
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	99.94
PRK05957	389	aspartate aminotransferase; Provisional	99.94
PRK06348	384	aspartate aminotransferase; Provisional	99.94
PRK06207	405	aspartate aminotransferase; Provisional	99.94
PRK06290	410	aspartate aminotransferase; Provisional	99.94
PRK07682	378	hypothetical protein; Validated	99.94
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.94
PRK07179	407	hypothetical protein; Provisional	99.94
PRK07337	388	aminotransferase; Validated	99.94
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.94
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.94
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	99.94
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	99.94
PRK09082	386	methionine aminotransferase; Validated	99.94
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	99.94
PRK08068	389	transaminase; Reviewed	99.94
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	99.94
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.94
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	99.94
PRK05942	394	aspartate aminotransferase; Provisional	99.93
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.93
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.93
PRK07683	387	aminotransferase A; Validated	99.93
PRK07309	391	aromatic amino acid aminotransferase; Validated	99.93
PRK08912	387	hypothetical protein; Provisional	99.93
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.93
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	99.93
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	99.93
PRK07550	386	hypothetical protein; Provisional	99.93
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.93
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	99.93
PRK08636	403	aspartate aminotransferase; Provisional	99.93
PLN02656	409	tyrosine transaminase	99.93
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	99.93
PRK06225	380	aspartate aminotransferase; Provisional	99.93
PRK07777	387	aminotransferase; Validated	99.93
PRK07324	373	transaminase; Validated	99.93
PLN02187	462	rooty/superroot1	99.93
PRK05764	393	aspartate aminotransferase; Provisional	99.93
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.92
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.92
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	99.92
PRK06855	433	aminotransferase; Validated	99.92
PRK14012	404	cysteine desulfurase; Provisional	99.92
PRK08363	398	alanine aminotransferase; Validated	99.92
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.92
PRK09148	405	aminotransferase; Validated	99.92
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	99.92
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.92
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	99.92
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	99.92
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	99.92
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.92
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.92
PLN02483	489	serine palmitoyltransferase	99.92
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	99.92
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	99.92
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	99.92
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	99.92
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	99.92
PRK06107	402	aspartate aminotransferase; Provisional	99.91
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	99.91
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	99.91
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	99.91
PRK08175	395	aminotransferase; Validated	99.91
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	99.91
PRK13392	410	5-aminolevulinate synthase; Provisional	99.91
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	99.91
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	99.91
PRK01533	366	histidinol-phosphate aminotransferase; Validated	99.91
PTZ00377	481	alanine aminotransferase; Provisional	99.91
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	99.91
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	99.91
KOG1549	428	consensus Cysteine desulfurase NFS1 [Amino acid tr	99.91
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.91
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	99.91
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.91
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	99.91
PTZ00433	412	tyrosine aminotransferase; Provisional	99.91
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	99.91
PRK09064	407	5-aminolevulinate synthase; Validated	99.91
PLN02721	353	threonine aldolase	99.91
PLN02231	534	alanine transaminase	99.91
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	99.91
PRK09265	404	aminotransferase AlaT; Validated	99.91
PRK09275	527	aspartate aminotransferase; Provisional	99.91
PLN02822	481	serine palmitoyltransferase	99.91
PRK02731	367	histidinol-phosphate aminotransferase; Validated	99.91
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.91
PRK09105	370	putative aminotransferase; Provisional	99.91
PRK08056	356	threonine-phosphate decarboxylase; Provisional	99.91
KOG0259	447	consensus Tyrosine aminotransferase [Amino acid tr	99.9
PRK00950	361	histidinol-phosphate aminotransferase; Validated	99.9
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	99.9
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	99.9
PRK03321	352	putative aminotransferase; Provisional	99.9
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	99.9
PRK10534	333	L-threonine aldolase; Provisional	99.9
PRK13393	406	5-aminolevulinate synthase; Provisional	99.9
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	99.9
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	99.9
PLN02672	1082	methionine S-methyltransferase	99.89
PLN02955	476	8-amino-7-oxononanoate synthase	99.89
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	99.89
PRK02769	380	histidine decarboxylase; Provisional	99.89
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	99.89
PRK07568	397	aspartate aminotransferase; Provisional	99.89
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	99.89
PLN02724	805	Molybdenum cofactor sulfurase	99.89
PRK06836	394	aspartate aminotransferase; Provisional	99.89
PRK06358	354	threonine-phosphate decarboxylase; Provisional	99.89
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	99.89
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.89
PRK05839	374	hypothetical protein; Provisional	99.89
PRK13237	460	tyrosine phenol-lyase; Provisional	99.88
PRK07392	360	threonine-phosphate decarboxylase; Validated	99.88
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.88
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	99.88
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.88
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	99.88
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	99.88
PRK07908	349	hypothetical protein; Provisional	99.88
PRK03080	378	phosphoserine aminotransferase; Provisional	99.88
PRK09257	396	aromatic amino acid aminotransferase; Provisional	99.88
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.88
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	99.88
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	99.87
cd00609	350	AAT_like Aspartate aminotransferase family. This f	99.87
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.87
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.87
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	99.87
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	99.87
PLN02397	423	aspartate transaminase	99.87
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	99.87
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.87
PLN03032	374	serine decarboxylase; Provisional	99.87
PRK06425	332	histidinol-phosphate aminotransferase; Validated	99.87
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.86
PTZ00376	404	aspartate aminotransferase; Provisional	99.86
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.86
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.86
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.86
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.86
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	99.85
PRK05968	389	hypothetical protein; Provisional	99.85
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	99.85
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	99.85
PRK06767	386	methionine gamma-lyase; Provisional	99.85
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.85
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	99.84
KOG1360	570	consensus 5-aminolevulinate synthase [Coenzyme tra	99.84
PRK07811	388	cystathionine gamma-synthase; Provisional	99.84
PLN02368	407	alanine transaminase	99.84
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.83
PRK06234	400	methionine gamma-lyase; Provisional	99.83
PRK04311	464	selenocysteine synthase; Provisional	99.83
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.83
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.83
PRK05367	954	glycine dehydrogenase; Provisional	99.83
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	99.83
PLN02242	418	methionine gamma-lyase	99.83
PRK08045	386	cystathionine gamma-synthase; Provisional	99.83
PRK08861	388	cystathionine gamma-synthase; Provisional	99.83
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.82
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.82
PRK07503	403	methionine gamma-lyase; Provisional	99.82
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.82
PRK08776	405	cystathionine gamma-synthase; Provisional	99.82
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	99.82
PRK08574	385	cystathionine gamma-synthase; Provisional	99.82
PRK15029	755	arginine decarboxylase; Provisional	99.82
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	99.82
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.82
PRK08637	388	hypothetical protein; Provisional	99.81
PRK12566	954	glycine dehydrogenase; Provisional	99.81
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.81
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.81
PRK08354	311	putative aminotransferase; Provisional	99.81
PRK08249	398	cystathionine gamma-synthase; Provisional	99.81
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.81
PRK08064	390	cystathionine beta-lyase; Provisional	99.81
KOG1359	417	consensus Glycine C-acetyltransferase/2-amino-3-ke	99.8
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.8
PRK07050	394	cystathionine beta-lyase; Provisional	99.8
PLN02452	365	phosphoserine transaminase	99.8
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.8
PLN02880	490	tyrosine decarboxylase	99.8
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.8
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	99.79
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	99.79
PRK06460	376	hypothetical protein; Provisional	99.79
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.79
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.79
PRK09028	394	cystathionine beta-lyase; Provisional	99.79
PLN02509	464	cystathionine beta-lyase	99.78
PRK07505	402	hypothetical protein; Provisional	99.78
PRK08114	395	cystathionine beta-lyase; Provisional	99.78
PRK07671	377	cystathionine beta-lyase; Provisional	99.77
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.77
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	99.77
PRK13578	720	ornithine decarboxylase; Provisional	99.77
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.77
PRK05939	397	hypothetical protein; Provisional	99.77
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.77
PRK07582	366	cystathionine gamma-lyase; Validated	99.77
PRK15399	713	lysine decarboxylase LdcC; Provisional	99.76
PRK05967	395	cystathionine beta-lyase; Provisional	99.76
PLN02590	539	probable tyrosine decarboxylase	99.76
PRK06434	384	cystathionine gamma-lyase; Validated	99.76
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.75
PRK15400	714	lysine decarboxylase CadA; Provisional	99.75
PRK01278	389	argD acetylornithine transaminase protein; Provisi	99.75
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.75
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.75
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.74
PLN02263	470	serine decarboxylase	99.74
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.74
PRK07049	427	methionine gamma-lyase; Validated	99.74
KOG1368	384	consensus Threonine aldolase [Amino acid transport	99.74
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	99.74
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.74
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	99.73
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	99.73
PRK03244	398	argD acetylornithine aminotransferase; Provisional	99.73
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	99.73
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	99.72
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	99.72
COG3844	407	Kynureninase [Amino acid transport and metabolism]	99.72
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	99.71
KOG0256	471	consensus 1-aminocyclopropane-1-carboxylate syntha	99.71
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	99.71
PRK02936	377	argD acetylornithine aminotransferase; Provisional	99.7
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.7
PRK02627	396	acetylornithine aminotransferase; Provisional	99.69
PTZ00125	400	ornithine aminotransferase-like protein; Provision	99.68
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	99.67
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	99.67
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	99.66
KOG0633	375	consensus Histidinol phosphate aminotransferase [A	99.66
PRK12462	364	phosphoserine aminotransferase; Provisional	99.66
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.66
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	99.64
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	99.64
KOG1357	519	consensus Serine palmitoyltransferase [Posttransla	99.63
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.63
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	99.61
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	99.6
PRK04260	375	acetylornithine aminotransferase; Provisional	99.59
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	99.59
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	99.59
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	99.58
PRK05367	954	glycine dehydrogenase; Provisional	99.57
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	99.57
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	99.55
PLN02624	474	ornithine-delta-aminotransferase	99.53
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	99.52
KOG0634	472	consensus Aromatic amino acid aminotransferase and	99.51
KOG0053	409	consensus Cystathionine beta-lyases/cystathionine	99.51
PRK03715	395	argD acetylornithine transaminase protein; Provisi	99.5
PLN00144	382	acetylornithine transaminase	99.5
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	99.46
PRK08088	425	4-aminobutyrate aminotransferase; Validated	99.46
PRK04612	408	argD acetylornithine transaminase protein; Provisi	99.44
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	99.41
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	99.41
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	99.4
PRK09792	421	4-aminobutyrate transaminase; Provisional	99.39
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	99.38
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	99.37
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	99.37
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	99.37
PLN02760	504	4-aminobutyrate:pyruvate transaminase	99.36
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	99.36
PRK12403	460	putative aminotransferase; Provisional	99.36
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	99.35
KOG0258	475	consensus Alanine aminotransferase [Amino acid tra	99.34
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	99.34
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	99.34
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	99.33
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	99.33
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.33
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	99.33
KOG1383	491	consensus Glutamate decarboxylase/sphingosine phos	99.32
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	99.32
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	99.31
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	99.29
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	99.29
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	99.28
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	99.28
PRK06105	460	aminotransferase; Provisional	99.27
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	99.27
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	99.27
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	99.27
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	99.27
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	99.26
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	99.26
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	99.26
PRK06541	460	hypothetical protein; Provisional	99.26
PRK07046	453	aminotransferase; Validated	99.25
KOG1358	467	consensus Serine palmitoyltransferase [Posttransla	99.25
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	99.25
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	99.24
PRK06062	451	hypothetical protein; Provisional	99.21
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	99.19
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	99.17
PRK07678	451	aminotransferase; Validated	99.16
PRK06149	972	hypothetical protein; Provisional	99.15
COG4100	416	Cystathionine beta-lyase family protein involved i	99.15
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	99.15
PRK05965	459	hypothetical protein; Provisional	99.14
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	99.14
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	99.14
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	99.13
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	99.13
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	99.11
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	99.08
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	99.07
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	99.06
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	99.05
PRK07481	449	hypothetical protein; Provisional	99.05
PRK07482	461	hypothetical protein; Provisional	99.04
PRK07480	456	putative aminotransferase; Validated	99.02
PRK07483	443	hypothetical protein; Provisional	99.02
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	99.02
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	99.02
PRK06148	1013	hypothetical protein; Provisional	99.0
KOG0628	511	consensus Aromatic-L-amino-acid/L-histidine decarb	98.99
PRK06917	447	hypothetical protein; Provisional	98.97
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	98.96
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	98.94
PRK07036	466	hypothetical protein; Provisional	98.92
KOG1402	427	consensus Ornithine aminotransferase [Amino acid t	98.89
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	98.89
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	98.88
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	98.87
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	98.85
KOG0629	510	consensus Glutamate decarboxylase and related prot	98.8
KOG1412	410	consensus Aspartate aminotransferase/Glutamic oxal	98.76
PRK12566	954	glycine dehydrogenase; Provisional	98.75
KOG1404	442	consensus Alanine-glyoxylate aminotransferase AGT2	98.75
PRK08297	443	L-lysine aminotransferase; Provisional	98.74
KOG3846	465	consensus L-kynurenine hydrolase [Amino acid trans	98.69
KOG1411	427	consensus Aspartate aminotransferase/Glutamic oxal	98.67
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	98.62
KOG1401	433	consensus Acetylornithine aminotransferase [Amino	98.48
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	98.31
KOG1403	452	consensus Predicted alanine-glyoxylate aminotransf	98.2
PF04864	363	Alliinase_C: Allinase; InterPro: IPR006948 Allicin	98.14
KOG2790	370	consensus Phosphoserine aminotransferase [Coenzyme	97.77
KOG1405	484	consensus 4-aminobutyrate aminotransferase [Amino	97.67
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	97.29
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	97.14
KOG3843	432	consensus Predicted serine hydroxymethyltransferas	95.94

>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=2e-109  Score=801.40  Aligned_cols=452  Identities=69%  Similarity=1.120  Sum_probs=437.0

Q ss_pred             chhhhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 009673           77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR  156 (529)
Q Consensus        77 ~~~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~  156 (529)
                      .+.+.+|.+.|||+++++++|+.||+.+|+||+|||+++.+|+||++++|+|||+|||||.|||+|++++|++|.+|++|
T Consensus        15 ~~~~~~l~~~DPev~~ii~~Ek~RQ~~gieLIaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~R   94 (477)
T KOG2467|consen   15 KLGNTPLEEVDPEVHDIIEKEKERQKRGIELIASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKR   94 (477)
T ss_pred             hhhcCchhhcChHHHHHHHHHHHhhhcceeEeecccchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHH
Confidence            55678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCC
Q 009673          157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG  236 (529)
Q Consensus       157 la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~  236 (529)
                      +.+.||++++.|+||||+.|||.||+++++++++|||+||.+|+++|||++|||++..+++++.+.+|+..||.+|+++|
T Consensus        95 ALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG  174 (477)
T KOG2467|consen   95 ALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTG  174 (477)
T ss_pred             HHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccc
Q 009673          237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL  316 (529)
Q Consensus       237 ~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l  316 (529)
                      .||||.||+.+..+|||+||++.|.|++.+|++++++||++.|+++++|+||.+|+++.++.++||++||||++|+||+|
T Consensus       175 ~IDYD~Le~~A~~frPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTHKsL  254 (477)
T KOG2467|consen  175 YIDYDKLEKTATLFRPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTHKSL  254 (477)
T ss_pred             ceehHHHHHHHHhcCCcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeeccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCeEEEeeCCC---------cchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 009673          317 RGPRGGMIFFKKDP---------VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA  387 (529)
Q Consensus       317 ~GprgG~i~~~~~~---------~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~  387 (529)
                      +|||||+|+++++.         ...+++.++|++++||++||+||+|.|+|+|+||+++.+++|++|++|+++|++.|+
T Consensus       255 RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala  334 (477)
T KOG2467|consen  255 RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALA  334 (477)
T ss_pred             cCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999863         146899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673          388 SRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV  467 (529)
Q Consensus       388 ~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~  467 (529)
                      ++|.++|+.++++|||+|+++||+++.|+|+..+++.|+..+|.+|+|++|||.+++.|+|||||+|++|+||+.|+||+
T Consensus       335 ~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~  414 (477)
T KOG2467|consen  335 SALISRGYKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFE  414 (477)
T ss_pred             HHHHHcCceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 009673          468 AIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV  529 (529)
Q Consensus       468 ~la~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~  529 (529)
                      +++++|.++++++.++|...++++++||++.+.++.. ..+++.+||++|++|+.+||+|+|
T Consensus       415 ~v~~fi~~av~i~~~~~~~~~~~~lkdf~~~~~~~~~-~~~~v~~Lr~~Ve~fa~~fp~pg~  475 (477)
T KOG2467|consen  415 KVADFIDRAVKIALEIQKEAGGKKLKDFKKFLSENKV-MSEEVAELRKRVEEFAGQFPMPGF  475 (477)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccchHHHHHHHhccCch-hHHHHHHHHHHHHHHHhcCCCCCC
Confidence            9999999999999999998877999999999876541 124789999999999999999996

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=8.7e-97  Score=727.18  Aligned_cols=408  Identities=56%  Similarity=0.857  Sum_probs=394.0

Q ss_pred             hhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673           81 YSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA  160 (529)
Q Consensus        81 ~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~  160 (529)
                      ..+...||++++++.+|..||++.|+||||||++|+.|++|++|.|+|||+|||||.|||+||+++|++|.+|+++++++
T Consensus         5 ~~l~~~d~~i~~~i~~e~~rq~~~ieLIASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~L   84 (413)
T COG0112           5 ASLADYDPEIFEAIQQELERQREHIELIASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKL   84 (413)
T ss_pred             hhHHhcCHHHHHHHHHHHHHHhhceeeeeccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHH
Confidence            56778999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCH
Q 009673          161 FNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY  240 (529)
Q Consensus       161 ~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~  240 (529)
                      ||++.    +||||+||+.||.+++.+|++|||+||.+++.||||+|||.     +++++|.+|++++|++|++++.||+
T Consensus        85 Fga~~----anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~-----~v~~sG~~~~~v~Y~vd~et~~IDy  155 (413)
T COG0112          85 FGAEY----ANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGS-----PVNFSGKLFNVVSYGVDPETGLIDY  155 (413)
T ss_pred             hCCCc----cccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCC-----CCCccceeEEeEecccccccCccCH
Confidence            99997    69999999999999999999999999999999999999995     6889999999999999999999999


Q ss_pred             HHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCC
Q 009673          241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPR  320 (529)
Q Consensus       241 d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gpr  320 (529)
                      |++++++.++|||+||++.|.|++.+|++++++||+++|++|++|+||++||++.|.+++|+++||||++|+||||+|||
T Consensus       156 D~~~k~a~e~kPK~ii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGPr  235 (413)
T COG0112         156 DEVEKLAKEVKPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGPR  235 (413)
T ss_pred             HHHHHHHHHhCCCEEEECccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccceEeCCcccCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC
Q 009673          321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG  400 (529)
Q Consensus       321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~  400 (529)
                      ||+|+++++     ++.++|++++||+.||+|++|.|||.++|++++++++|++|++++++|++.|++.|.+.|++++++
T Consensus       236 GG~Il~~~e-----el~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsG  310 (413)
T COG0112         236 GGIILTNDE-----ELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSG  310 (413)
T ss_pred             ceEEEeccH-----HHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecC
Confidence            999999985     899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          401 GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       401 gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +|++|++++|+++.++++..++..|++.||.+|+|.+|+|. +|+.++|||||++++|+|||.++||++++++|.+++..
T Consensus       311 gTdnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~  390 (413)
T COG0112         311 GTDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG  390 (413)
T ss_pred             CccceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence            99999999999987899999999999999999999999997 89999999999999999999999999999999999974


Q ss_pred             HHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCC
Q 009673          480 TLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG  528 (529)
Q Consensus       480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~  528 (529)
                      ..                     .     .++++|++|.+||++||++.
T Consensus       391 ~~---------------------~-----~~~~vk~~V~~l~~~fp~y~  413 (413)
T COG0112         391 LK---------------------D-----VPAEVKEEVAELCRRFPLYK  413 (413)
T ss_pred             cc---------------------h-----hHHHHHHHHHHHHHhCCCCC
Confidence            31                     1     47899999999999999874

>PLN02271 serine hydroxymethyltransferase

Probab=100.00  E-value=2e-92  Score=737.56  Aligned_cols=445  Identities=56%  Similarity=0.978  Sum_probs=418.8

Q ss_pred             hhhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 009673           79 VDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL  158 (529)
Q Consensus        79 ~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la  158 (529)
                      .++.|.+.||++++++.+|..||+++|+||||||++|+.|++++++.|+|+|++||||.|||+|++++|++|.+|+++++
T Consensus       125 ~~~~l~~~Dpei~~li~~E~~rQ~~~l~LIASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~  204 (586)
T PLN02271        125 GNQPLPEADPDIHELMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERAL  204 (586)
T ss_pred             HhccHhhhCHHHHHHHHHHHHHHhcCeeeccccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHH
Confidence            44578899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccc-ccccccccceEEEEEcccCCCCCC
Q 009673          159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP-KRRVSGTSIYFESMPYRLDESTGL  237 (529)
Q Consensus       159 ~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~-~~~i~~~g~~~~~v~~~v~~~~~~  237 (529)
                      ++||+++++|++|||+.||+.||++++.+|++|||+||.++++||||++|+++.. .+.++..|.++++++|++|++++.
T Consensus       205 ~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~  284 (586)
T PLN02271        205 AAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGY  284 (586)
T ss_pred             HHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCc
Confidence            9999999999999999999999999999999999999999999999999997542 235678899999999999888899


Q ss_pred             CCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccccccc
Q 009673          238 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLR  317 (529)
Q Consensus       238 iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~  317 (529)
                      +|+|++++.+..++||+|+++.+.|++.+|+++|++||+++|++|++|+||.+|+++.+.+++|+.++|++++|+||||+
T Consensus       285 IDyd~lek~a~~~rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtLr  364 (586)
T PLN02271        285 IDYDKLEEKALDFRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSLR  364 (586)
T ss_pred             cCHHHHHHHhhhcCCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcccCC
Confidence            99999999777779999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCeEEEeeCCC--------------cchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673          318 GPRGGMIFFKKDP--------------VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC  383 (529)
Q Consensus       318 GprgG~i~~~~~~--------------~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a  383 (529)
                      |||||+|+++++.              ...+++.++|++++||++||+|+++.|||++++++++..++|++|++|+++|+
T Consensus       365 GPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NA  444 (586)
T PLN02271        365 GPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNA  444 (586)
T ss_pred             CCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence            9999999998641              01346889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCH
Q 009673          384 RALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSE  463 (529)
Q Consensus       384 ~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~  463 (529)
                      +.|++.|.+.|+++++++|++|++++|+++.++++..+++.|+++||.+|++.+|++.+++.++|||||++++|+||+.|
T Consensus       445 kaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e  524 (586)
T PLN02271        445 QALASALLRRKCRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLE  524 (586)
T ss_pred             HHHHHHHHHCCCeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCc
Confidence            99999999999999999999999999999999999999999999999999999999988899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 009673          464 KEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV  529 (529)
Q Consensus       464 ~d~~~la~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~  529 (529)
                      +||++++++|.+++++.+++|++. |+++++|++.+.++.     .+.+||++|++||++||+|+|
T Consensus       525 ~d~~~iA~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~i~~l~~~V~~~~~~fp~p~~  584 (586)
T PLN02271        525 SDFETIADFLLRAAQIASAVQREH-GKLQKEFLKGLQNNK-----DIVELRNRVEAFASQFAMPGF  584 (586)
T ss_pred             HHHHHHHHHHHHHHhhhhhhhhhc-chhhhhhhhccCCHH-----HHHHHHHHHHHHHHhCCCCCC
Confidence            999999999999999998888876 788899988886543     789999999999999999975

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=100.00  E-value=3.6e-83  Score=654.73  Aligned_cols=391  Identities=58%  Similarity=0.961  Sum_probs=331.9

Q ss_pred             cccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC
Q 009673           83 LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN  162 (529)
Q Consensus        83 l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g  162 (529)
                      |++.||++++++++|..||+++|+|+||||++||.|++++++.|+|+|++||||.|||+|++++|++|.+|+++++++||
T Consensus         1 l~~~d~ei~~li~~e~~rq~~~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~   80 (399)
T PF00464_consen    1 LKEFDPEIYELIEKEEERQRSTLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFG   80 (399)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHSEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT
T ss_pred             CcccCHHHHHHHHHHHHHHhcCccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhC
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHH
Q 009673          163 LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDM  242 (529)
Q Consensus       163 ~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~  242 (529)
                      +++++|.+||++.||+.||++++.+|++|||+||.+++.+|||++||+....+++...|.+|++++|++|++++.||+|+
T Consensus        81 ~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~  160 (399)
T PF00464_consen   81 AEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDE  160 (399)
T ss_dssp             -STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHH
T ss_pred             CCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHH
Confidence            99999999999999999999999999999999999999999999999876656667788899999999998899999999


Q ss_pred             HHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCe
Q 009673          243 LEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG  322 (529)
Q Consensus       243 le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG  322 (529)
                      +++++++++||+|+++.|+||+.+|+++|++||++.|++|++|++|.+|+|+.|.+++|++++|++++||||+|+|||||
T Consensus       161 l~~~a~~~kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~ADvvt~sThKtl~GPrgg  240 (399)
T PF00464_consen  161 LEKLAKEHKPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPYADVVTGSTHKTLRGPRGG  240 (399)
T ss_dssp             HHHHHHHH--SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCTSSEEEEESSGGG-SSS-E
T ss_pred             HHHHHhhcCCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCccccceEEEeeccccccccCce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeeCCC--------cchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC
Q 009673          323 MIFFKKDP--------VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG  394 (529)
Q Consensus       323 ~i~~~~~~--------~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G  394 (529)
                      +|+++++.        ...+++.++|++++||+.||+|+++.++|++++|+++.+++|++|.+++++|++.|++.|.+.|
T Consensus       241 iI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G  320 (399)
T PF00464_consen  241 IILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERG  320 (399)
T ss_dssp             EEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            99999211        0113899999999999999999999999999999999888999999999999999999999999


Q ss_pred             cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673          395 YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI  473 (529)
Q Consensus       395 ~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i  473 (529)
                      +++++++|++|++++|+++.++++.++++.|+++||.+|++.+|+|.+++.++||||||+++|+||+.++||++++++|
T Consensus       321 ~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~I  399 (399)
T PF00464_consen  321 FKVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAELI  399 (399)
T ss_dssp             -EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHHH
T ss_pred             cEEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhhC
Confidence            9999999999999999998889999999999999999999999999888889999999999999999999999999986

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=100.00  E-value=5.3e-74  Score=609.58  Aligned_cols=449  Identities=71%  Similarity=1.156  Sum_probs=407.1

Q ss_pred             hhhhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 009673           78 FVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA  157 (529)
Q Consensus        78 ~~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~l  157 (529)
                      +....|.+.||+++++|.+|..||+++|+||||||++|+.|++++++.++++|++|+||+|||+|++++|++|++|++++
T Consensus        10 ~~~~~~~~~d~~~~~~i~~e~~~q~~~l~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~   89 (475)
T PLN03226         10 WGNAPLEEVDPEIADIIEKEKRRQWKGLELIASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRA   89 (475)
T ss_pred             cchhhhhhcCHHHHHHHHHHHHHHHcCeeEecCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHH
Confidence            45566889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCC
Q 009673          158 LAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL  237 (529)
Q Consensus       158 a~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~  237 (529)
                      +++|+.+.+.|.+||+++||+.||.+++.+|++|||+|+.++.+++||++|++......++..+.++++++|+++++++.
T Consensus        90 ~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~  169 (475)
T PLN03226         90 LEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGL  169 (475)
T ss_pred             HHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCC
Confidence            99999999888889999999999999999999999999999999999999997554444566677778888888878899


Q ss_pred             CCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccccccc
Q 009673          238 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLR  317 (529)
Q Consensus       238 iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~  317 (529)
                      +|+++|++++..++||+|+++.++++...|+++|+++|+++|+++++|+||++|++..+..++|++++|++++|+||||+
T Consensus       170 iD~d~Le~~l~~~~pklIv~~~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~L~  249 (475)
T PLN03226        170 IDYDKLEKKAMLFRPKLIIAGASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKSLR  249 (475)
T ss_pred             cCHHHHHHHHhhcCCeEEEEecCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCccccc
Confidence            99999999998778999988888899999999999999999999999999999999888888888899999999999999


Q ss_pred             CCCCeEEEeeCCCc--------chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Q 009673          318 GPRGGMIFFKKDPV--------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR  389 (529)
Q Consensus       318 GprgG~i~~~~~~~--------~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~  389 (529)
                      ||+||+|+++++..        .+.++.+.++...+|+++|+|+++.++++++|++++...+++++.+++.+|+++|++.
T Consensus       250 GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~  329 (475)
T PLN03226        250 GPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANR  329 (475)
T ss_pred             CCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHH
Confidence            99999999987421        1124555778888899999999999999999999998888999999999999999999


Q ss_pred             HHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHH
Q 009673          390 LVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI  469 (529)
Q Consensus       390 L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~l  469 (529)
                      |.+.|++++++++++|++++++++.++++.++.+.|+++||.++++.+|++.++..+++||+|++++|+||++++||+++
T Consensus       330 L~~~G~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~i  409 (475)
T PLN03226        330 LMSKGYKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKV  409 (475)
T ss_pred             HHhCCCEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHH
Confidence            99999999998888999999998888999999999999999999999999888888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 009673          470 ADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV  529 (529)
Q Consensus       470 a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~  529 (529)
                      +++|.++++....+++++ ++++++|...++.+..  ...+++||++|.+||++||+|++
T Consensus       410 a~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~fp~~~~  466 (475)
T PLN03226        410 AEFLHRAVTIALKIQKEH-GKKLKDFKKGLESNDF--SKDIEALRAEVEEFATSFPMPGF  466 (475)
T ss_pred             HHHHHHHHHHhhhhhhhc-ccchhhhhhhcccccc--HHHHHHHHHHHHHHHHhCCCCCC
Confidence            999999999888887775 7888998766643310  03689999999999999999974

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=100.00  E-value=4.4e-73  Score=591.88  Aligned_cols=424  Identities=42%  Similarity=0.706  Sum_probs=381.5

Q ss_pred             hhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673           81 YSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA  160 (529)
Q Consensus        81 ~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~  160 (529)
                      ..|.+.||+++++|++|..||+++|+||||||++|+.|++++++.++|+|++||||.|||+|++++|++|.+|.++++++
T Consensus        28 ~~l~~~d~~~~~~~~~e~~rq~~~l~LiasEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~l  107 (493)
T PRK13580         28 DVILHVEPRIAEAIRQELADQRSSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKEL  107 (493)
T ss_pred             HHHHhhCHHHHHHHHHHHHHHhcCceEecccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHH
Confidence            45778999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCceeeecCChHHHHHHHHHhhcCC-------------------------------CCEEEEcCCCCCcccccc
Q 009673          161 FNLDENKWGVNVQPLSGSPANFEVYTAILKP-------------------------------HDRIMGLDLPHGGHLSHG  209 (529)
Q Consensus       161 ~g~~~~~~~~~V~~~sGs~A~~~~l~all~p-------------------------------GD~Vl~~~~~~~g~~s~g  209 (529)
                      ||+++    +|||+.||+.||++++.++++|                               ||+||.+++.+|||++|+
T Consensus       108 f~a~~----anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg  183 (493)
T PRK13580        108 FGAEH----AYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHG  183 (493)
T ss_pred             hCCCc----ccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecC
Confidence            99998    6999999999999999999987                               899999999999999999


Q ss_pred             ccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccc
Q 009673          210 FMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHI  289 (529)
Q Consensus       210 ~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~  289 (529)
                      +     ..++.+.++++++|+++++++.+|++++++++++++|++++++.|++++..|+++|++||+++|+++++|+||+
T Consensus       184 ~-----~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD~AH~  258 (493)
T PRK13580        184 F-----RPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVDMAHF  258 (493)
T ss_pred             c-----ccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEECchh
Confidence            6     45778888999999999778999999999999997788888889999999999999999999999999999999


Q ss_pred             cccccccccC---CCCCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHH
Q 009673          290 SGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH  366 (529)
Q Consensus       290 ~Gli~~~~~~---~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~  366 (529)
                      +|++..+..+   +++.++||+++|+||+|+||+||+|++++      ++.+.++++ .|+++|+|+.+.++|+++++.+
T Consensus       259 ~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~GG~I~~~~------~l~~~L~~a-~P~i~gg~l~p~iAA~avAl~e  331 (493)
T PRK13580        259 AGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRGGLVLAKK------EYADAVDKG-CPLVLGGPLPHVMAAKAVALAE  331 (493)
T ss_pred             hceeccccchhhcCCCCCCcEEEeCChhhccCCCeEEEEecH------HHHHHHhhC-CCcccCCCccHHHHHHHHHHHH
Confidence            9999866644   56668999999999999999999999998      788888776 4889999999999999999999


Q ss_pred             hcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCC
Q 009673          367 AQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALV  445 (529)
Q Consensus       367 ~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~  445 (529)
                      +.++++++|++++++|+++|++.|.+.|++++.+++++|++++++.+.+.++..+.+.|+++||.++++.+|.+. +++.
T Consensus       332 ~~~~ef~~y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~  411 (493)
T PRK13580        332 ARTPEFQKYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWY  411 (493)
T ss_pred             HhCccHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCC
Confidence            887778899999999999999999999999987778999999999876656678889999999999999999875 5567


Q ss_pred             CCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCC
Q 009673          446 PGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFP  525 (529)
Q Consensus       446 ~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p  525 (529)
                      +++||||++++|+||++++||++++++|.++++.....+.. .|+++++  +...++     ..++++|++|.+||++||
T Consensus       412 ~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~~~~~~~-~~~~~~~--~~~~~~-----~~~~~~~~~v~~~~~~~p  483 (493)
T PRK13580        412 TSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNTTPGTTA-EGAPSKA--KYELDE-----GVAQEVRARVAELLARFP  483 (493)
T ss_pred             CceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhhhhcccc-ccccccc--cccCCH-----HHHHHHHHHHHHHHHhCC
Confidence            89999999999999999999999999999998765333222 3666665  222222     368899999999999999


Q ss_pred             C-CC
Q 009673          526 I-PG  528 (529)
Q Consensus       526 ~-~~  528 (529)
                      + |+
T Consensus       484 ~~~~  487 (493)
T PRK13580        484 LYPE  487 (493)
T ss_pred             CCCc
Confidence            8 54

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=100.00  E-value=5.2e-62  Score=519.20  Aligned_cols=442  Identities=64%  Similarity=1.071  Sum_probs=384.4

Q ss_pred             hhhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 009673           79 VDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL  158 (529)
Q Consensus        79 ~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la  158 (529)
                      ++..|++.||++++++.+|.++|+++|+|+||||++||.|++++.+.++++|++|+|+++|+.|+++.+++|+.++++++
T Consensus        11 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a   90 (452)
T PTZ00094         11 LNQSLKEADPELYELIEKEKERQIEGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRAL   90 (452)
T ss_pred             hhhhHhhhCHHHHHHHHHHHHHHHcCeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHH
Confidence            45668889999999999999999999999999999999999999999999999999999999999999999988999999


Q ss_pred             HHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCC
Q 009673          159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV  238 (529)
Q Consensus       159 ~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~i  238 (529)
                      ++||+++++|.++++++||++||.+++.++++|||+|++.+.+|++|++++.......+...+..+++.++++++ ++.+
T Consensus        91 ~lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~-~g~i  169 (452)
T PTZ00094         91 EAFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE-KGLI  169 (452)
T ss_pred             HHhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC-CCCc
Confidence            999999888878899999999999999999999999999999999999887533222334455567777887774 4899


Q ss_pred             CHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccC
Q 009673          239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG  318 (529)
Q Consensus       239 D~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~G  318 (529)
                      |+++|+++++..+|++|+++.++++...|+++|.++|+++|+++++|++|+.|+++.+..+.++.++|++++|+||||.|
T Consensus       170 d~~~L~~~l~~~~~~lvi~~~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~G  249 (452)
T PTZ00094        170 DYDKLEELAKAFRPKLIIAGASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRG  249 (452)
T ss_pred             CHHHHHHHHHHhCCCEEEEeCCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCC
Confidence            99999999987689998887778888999999999999999999999999999998877777777899999999999999


Q ss_pred             CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEe
Q 009673          319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV  398 (529)
Q Consensus       319 prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~  398 (529)
                      |+||+++++++..  ..+...++...+|.++|+++.+.+++++++++++...+++++.+++.+++++|.+.|.+.|+++.
T Consensus       250 P~Gg~l~~~~~~~--~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~  327 (452)
T PTZ00094        250 PRSGLIFYRKKVK--PDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYDLV  327 (452)
T ss_pred             CCceEEEEecccc--hHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcEEe
Confidence            9999999976311  12445566677888889999999999999999887677889999999999999999988899988


Q ss_pred             cCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          399 SGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       399 ~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .+++++|..++++...++++..+...|+++||.++...+|++..+..+++||+|++.+|++|++++||++++++|.+++.
T Consensus       328 ~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~  407 (452)
T PTZ00094        328 TGGTDNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVK  407 (452)
T ss_pred             cCCCCCceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            75555677788887778888999999999999999888887765566789999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 009673          479 ITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV  529 (529)
Q Consensus       479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~  529 (529)
                      ....++++. +++..+|.+...++     ..+.++|++|.+||++||+|+.
T Consensus       408 ~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~~  452 (452)
T PTZ00094        408 LAQEIQKQV-GKKLVDFKKALEKN-----PELQKLRQEVVEFASQFPFPGI  452 (452)
T ss_pred             HHhhhhhhc-ccchhhhhhhcccH-----HHHHHHHHHHHHHHHhCCCCCC
Confidence            887776666 66656665544433     3789999999999999999984

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=100.00  E-value=6.4e-54  Score=451.91  Aligned_cols=412  Identities=57%  Similarity=0.871  Sum_probs=354.0

Q ss_pred             chhhhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 009673           77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR  156 (529)
Q Consensus        77 ~~~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~  156 (529)
                      .|+.+.|++.||+++++|++|..+|++.|+|++|||+++|.|++++.+.+.++|+.|++|+|+++|++.++++|++++++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~   82 (416)
T PRK13034          3 FFFSDSLEEYDDEVFAAINKELERQQDHLELIASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIER   82 (416)
T ss_pred             chhhhhHhhhCHHHHHHHHHHHHHHhcCeeecccccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHH
Confidence            35678899999999999999999999999999999999999999999998899999999999999999999999989999


Q ss_pred             HHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCC
Q 009673          157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG  236 (529)
Q Consensus       157 la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~  236 (529)
                      +++++|.+.    +.+.+.||+.||.+++.++++|||+|++.+..|++++.+|.     .....+..++.+.+++++.++
T Consensus        83 la~l~g~~~----alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~  153 (416)
T PRK13034         83 AKQLFGCDY----ANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGA-----KVSLSGKWYNAVQYGVDRLTG  153 (416)
T ss_pred             HHHHhCCCc----eEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCC-----cceeccceeeeEEcccccccC
Confidence            999999986    45667899999999999999999999999999988766553     222334444546777776678


Q ss_pred             CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccc
Q 009673          237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL  316 (529)
Q Consensus       237 ~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l  316 (529)
                      .+|++++++.+...++|+|+++.+.++...|+++|.++|+++|+++++|+||+.|.++.+....++.++|++++|+||++
T Consensus       154 ~~d~~~le~~l~~~~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l  233 (416)
T PRK13034        154 LIDYDEVEELAKEHKPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTL  233 (416)
T ss_pred             CcCHHHHHHHHhhcCCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccC
Confidence            89999999998666899999877888888899999999999999999999999999887766666667999999999999


Q ss_pred             cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcE
Q 009673          317 RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK  396 (529)
Q Consensus       317 ~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~  396 (529)
                      +||.||+++++++     ++.++++...+++++++++.+.+++++.++.+....++.++++++.+|+++|++.|.+.|++
T Consensus       234 ~g~~GG~v~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~  308 (416)
T PRK13034        234 RGPRGGMILTNDE-----EIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGYD  308 (416)
T ss_pred             CCCCCeEEEECcH-----HHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCCE
Confidence            9999999998774     56666777777777777888888888777777654556788999999999999999999999


Q ss_pred             EecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          397 LVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       397 v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      +..+++++|..++++...+.+...+.+.|+++||.++...+|++. .|..+++||+|++++|++|++++|++++++.|.+
T Consensus       309 ~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~  388 (416)
T PRK13034        309 LVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILD  388 (416)
T ss_pred             eccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHH
Confidence            875446789888888776777778889999999999987788864 5667889999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCC
Q 009673          476 GVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPI  526 (529)
Q Consensus       476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~  526 (529)
                      ++...                   + +.    +.+++||++|.+|+++||+
T Consensus       389 ~~~~~-------------------~-~~----~~~~~~~~~~~~~~~~~~~  415 (416)
T PRK13034        389 VLDDL-------------------G-NA----ALEQRVRKEVKALCSRFPI  415 (416)
T ss_pred             HHhcC-------------------C-CH----HHHHHHHHHHHHHHHhCCC
Confidence            87621                   0 11    2578999999999999996

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=100.00  E-value=7.5e-49  Score=414.98  Aligned_cols=412  Identities=54%  Similarity=0.847  Sum_probs=340.6

Q ss_pred             hhhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 009673           79 VDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL  158 (529)
Q Consensus        79 ~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la  158 (529)
                      +..+|++.||+++++|+++..++++.|+|+++||++|+.|++++...+.++|+.|+++++++.|.+..+++|+.++++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la   81 (416)
T PRK00011          2 FMDNLAEYDPEIADAIEQELKRQEEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAK   81 (416)
T ss_pred             cchhhhhcCHHHHHHHHHHHHHHhcCeeeecccCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHH
Confidence            34568999999999999988889999999999999999999999988888898899999999999999999988899999


Q ss_pred             HHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCC
Q 009673          159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV  238 (529)
Q Consensus       159 ~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~i  238 (529)
                      +++|++..    +|.++||+.|+..++.++++|||+|++++++|+++++++.     .+.+.+.+.+++.++++++++.+
T Consensus        82 ~~~g~~~~----~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~  152 (416)
T PRK00011         82 ELFGAEYA----NVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGS-----PVNFSGKLYNVVSYGVDEETGLI  152 (416)
T ss_pred             HHhCCCce----eeecCCchHHHHHHHHHhcCCCCEEEEeccccCCcccccc-----ccccccceeeEeecCcCcccCCc
Confidence            99999863    4666899999999999999999999999999988766543     12223333577777777556899


Q ss_pred             CHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccC
Q 009673          239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG  318 (529)
Q Consensus       239 D~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~G  318 (529)
                      |++++++.+++.+|++|+++.+++|...|+++|.++|+++|+++++|++|+.|++..+..+.++.++|++++|+||+++|
T Consensus       153 d~~~l~~~i~~~~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~~~di~~~S~~K~l~g  232 (416)
T PRK00011        153 DYDEVEKLALEHKPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTLRG  232 (416)
T ss_pred             CHHHHHHHHHhcCCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCCCCcEEEecCCcCCCC
Confidence            99999999976689999998788887789999999999999999999999988876554444555789999999999999


Q ss_pred             CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEe
Q 009673          319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV  398 (529)
Q Consensus       319 prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~  398 (529)
                      |+||+++++++     ++.++++....++..+++....++++..++......+++++.+++.++++++.+.|.+.|+++.
T Consensus       233 ~~gg~i~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~  307 (416)
T PRK00011        233 PRGGLILTNDE-----ELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGFRVV  307 (416)
T ss_pred             CCceEEEeCCH-----HHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeee
Confidence            99999999753     6777777666666667777778887777766655445688899999999999999999999876


Q ss_pred             cCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          399 SGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       399 ~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      ..++.++++++++.+.+++...+.+.|++.||.++....|.+. .+..+.++|+++..++++|++++|++++++.|++++
T Consensus       308 ~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~  387 (416)
T PRK00011        308 SGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVL  387 (416)
T ss_pred             ecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHH
Confidence            5334568888887655556778888999999999866555542 445567899999888889999999999999999887


Q ss_pred             HHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCC
Q 009673          478 EITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG  528 (529)
Q Consensus       478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~  528 (529)
                      ...                   .++.     .++++++||.+|+++||.+.
T Consensus       388 ~~~-------------------~~~~-----~~~~~~~~~~~~~~~~~~~~  414 (416)
T PRK00011        388 DNP-------------------DDEA-----VIEEVKEEVKELCKRFPLYK  414 (416)
T ss_pred             hcc-------------------Ccch-----hHHHHHHHHHHHHHhCCCCC
Confidence            632                   0122     57999999999999999654

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=100.00  E-value=5e-46  Score=391.63  Aligned_cols=383  Identities=62%  Similarity=0.979  Sum_probs=318.3

Q ss_pred             cCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC
Q 009673           85 EADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD  164 (529)
Q Consensus        85 ~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~  164 (529)
                      ++|++++.+|.+|...+++.|+|++++|++++.|++++..++..+|..|.++.++|+|.+..+++|+.+++++++++|++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~   81 (402)
T cd00378           2 DVDPEIAEIIKKENERQRETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE   81 (402)
T ss_pred             CcCHHHHHHHHHHHHHHHhCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC
Confidence            68999999999998888999999999999999999999999888999999999999999999999988889999999998


Q ss_pred             CCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHH
Q 009673          165 ENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLE  244 (529)
Q Consensus       165 ~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le  244 (529)
                      .    .+|.+++|++|+..++.++++|||+|++.+|+|+++++++...   .+...|..+..++++.+++++.+|+++++
T Consensus        82 ~----~~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~id~~~l~  154 (402)
T cd00378          82 Y----ANVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFT---KVSASGKLFESVPYGVDPETGLIDYDALE  154 (402)
T ss_pred             c----eeeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccc---cccccceeEEEecCCcCcccCCcCHHHHH
Confidence            6    3566788999999999999999999999999999887765321   13345553444554444336899999999


Q ss_pred             HHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCeEE
Q 009673          245 KTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMI  324 (529)
Q Consensus       245 ~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG~i  324 (529)
                      +.+...++++|+++.+++|...|+++|.++|+++|+++++|++|+.|+++.+..+.++.++|++++|+||+|+||+||++
T Consensus       155 ~~i~~~~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~~~dv~~~s~sK~l~G~~gg~i  234 (402)
T cd00378         155 KMALEFKPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRGGLI  234 (402)
T ss_pred             HHHHhCCCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcccCCcEEEeccccCCCCCCceEE
Confidence            99975589999998888988889999999999999999999999998876654444445789999999999999999999


Q ss_pred             EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCC
Q 009673          325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN  404 (529)
Q Consensus       325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~  404 (529)
                      +++++     ++.+++.....++..++++...+++++.++.+....+++++++++.++++++.+.|.+.|+.+......+
T Consensus       235 ~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~  309 (402)
T cd00378         235 LTRKG-----ELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVVSGGTDN  309 (402)
T ss_pred             EeccH-----HHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEeecCCCC
Confidence            99874     5777776655666677777778888777777655435678889999999999999999999886432356


Q ss_pred             ceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCC-CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          405 HLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKS-ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       405 ~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~-~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +++|+++.+.+.+..++.+.|+++||.++....|+... +..+.++|||+..++++|++++|++++++.|.++++.
T Consensus       310 ~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~  385 (402)
T cd00378         310 HLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD  385 (402)
T ss_pred             eEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence            88888887555667778888999999998766677642 3456789999999998999999999999999988764

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.9e-31  Score=278.10  Aligned_cols=339  Identities=19%  Similarity=0.191  Sum_probs=249.8

Q ss_pred             cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.|+|..+++  .+|+.+++++...+.+... .|     + ..+-+.++++.+.+++.+.+|++.+.- .+|.+|+|+ +
T Consensus        29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~-~Y-----~-~~~G~~~LReaia~~~~~~~~~~~~~~-~eiivt~Ga~~  100 (393)
T COG0436          29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGGT-HY-----T-PSAGIPELREAIAEKYKRRYGLDVDPE-EEIIVTAGAKE  100 (393)
T ss_pred             CEEEeCCCCCCCCCCHHHHHHHHHHHhcccC-CC-----C-CCCCCHHHHHHHHHHHHHHhCCCCCCC-CeEEEeCCHHH
Confidence            5789988876  6789999999987765311 12     1 223355788888899999998654321 247889998 9


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC--CCCCCCHHHHHHHhhhcCCcEEEE
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE--STGLVDYDMLEKTAILFRPKLIIA  257 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~--~~~~iD~d~le~~i~~~~pklIi~  257 (529)
                      |++.+++++++|||+|++++|.|..+        ...+.+.|.  ++++++++.  .+|.+|+|+|++.+++ ++|+|++
T Consensus       101 al~~~~~a~~~pGDeVlip~P~Y~~y--------~~~~~~~gg--~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~l  169 (393)
T COG0436         101 ALFLAFLALLNPGDEVLIPDPGYPSY--------EAAVKLAGG--KPVPVPLDEEENGFKPDLEDLEAAITP-KTKAIIL  169 (393)
T ss_pred             HHHHHHHHhcCCCCEEEEeCCCCcCH--------HHHHHhcCC--EEEEEeCCcCccCCcCCHHHHHhhcCc-cceEEEE
Confidence            99999999999999999999866543        335566776  677777643  3699999999999999 9999999


Q ss_pred             cCCCCCC--C---CCHHHHHHHHHHhCCEEEEecccccccccccc-cCCCCC--c---ccEEEecccccc--cCCCCeEE
Q 009673          258 GASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK--Y---CDVVTTTTHKSL--RGPRGGMI  324 (529)
Q Consensus       258 ~~s~~p~--~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~~~--~---aDiv~~S~hK~l--~GprgG~i  324 (529)
                      ++|||||  .   ..+++|+++|++||++||+|++ |.++++.+. +++.+.  .   .-|+++|+||++  +|||.||+
T Consensus       170 n~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEi-Y~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~  248 (393)
T COG0436         170 NSPNNPTGAVYSKEELKAIVELAREHDIIIISDEI-YEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWV  248 (393)
T ss_pred             eCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehh-hhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEe
Confidence            9999998  2   3588999999999999999999 788888774 444433  2   237889999985  89999999


Q ss_pred             EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCC
Q 009673          325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS-PEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGS  402 (529)
Q Consensus       325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~-~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt  402 (529)
                      +++++     ++.+.+.+.......+.+...+.++.+ ||+.-.. ...+..++.+.++++.+.+.|.+. |+.+..+..
T Consensus       249 v~~~~-----~l~~~~~~~~~~~~~~~~~~~Q~aa~~-aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~  322 (393)
T COG0436         249 VGPPE-----ELIAALRKLKSYLTSCAPTPAQYAAIA-ALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPE  322 (393)
T ss_pred             ecChH-----HHHHHHHHHHHhcccCCCHHHHHHHHH-HhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCC
Confidence            99942     676666533222334555666666554 6664321 234666678999999999999985 588877323


Q ss_pred             CCceEEEccCCCCCcH-HHHHHhHhcCCeEEcCCCCCCCC-CC-CCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          403 DNHLVLVDLRPMGIDG-ARVEKILDMASITLNKNSVPGDK-SA-LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       403 ~~~~~~v~~~~~~i~~-~~~~~~L~~~GI~v~~~~~Pg~~-~~-~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ..+++|+++... .++ +.+.++|++.||.|    +||.. +. .+.++|||++.      .+++++++..++|.+.+.
T Consensus       323 Ga~Y~~~~i~~~-~d~~~f~~~Ll~~~gV~v----~PG~~Fg~~~g~~~vRis~~------~~~~~l~~a~~rl~~~~~  390 (393)
T COG0436         323 GAFYLFPKIPEL-LDSEEFAKKLLEEAGVAV----VPGSGFGEPPGEGYVRLSLA------TSEETLEEALRRLARFLA  390 (393)
T ss_pred             eeEEEEeecCCC-CCHHHHHHHHHHhCCEEE----ecccccCCCCCCCeEEEEEe------cCHHHHHHHHHHHHHHHH
Confidence            467788888653 455 45678889999999    67765 32 35689999863      335788888888777664

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=2e-30  Score=270.22  Aligned_cols=347  Identities=22%  Similarity=0.243  Sum_probs=258.6

Q ss_pred             eeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC-CCCceeeecCChH-HHH
Q 009673          105 LELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSGS-PAN  181 (529)
Q Consensus       105 i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~-~~~~~~V~~~sGs-~A~  181 (529)
                      +.|. +.....|..|++++..+..+-++....+.  +.-.....+..+.+|+.+++++|+++ +    +|..|.|+ +++
T Consensus        24 vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~--~~~~~~~t~~~e~aRe~va~~~~a~~~~----eIvft~~tT~al   97 (405)
T COG0520          24 VYLDNAATSQKPQAVLDAVAEYYRRYNANVHRGA--HTLAEEATDLYEAAREAVARFLNADSSD----EIVFTRGTTEAL   97 (405)
T ss_pred             EEecCcccccCCHHHHHHHHHHHHhhcCCcCccc--chHHHHHHHHHHHHHHHHHHHhCCCCCC----eEEEeCChhHHH
Confidence            4553 23345799999999987755444322221  22233444555578999999999995 5    45567776 899


Q ss_pred             HHHHHhh---cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          182 FEVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       182 ~~~l~al---l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      ..+..++   +++||+|++.+.+|.+++..+...    ....|.  ++..++++ +++.+|.|++++.+++ +||+|.++
T Consensus        98 n~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~----~~~~Ga--~v~~i~~~-~~g~~~~~~~~~~i~~-~Tklvais  169 (405)
T COG0520          98 NLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQEL----AKRTGA--KVRVIPLD-DDGLLDLDALEKLITP-KTKLVALS  169 (405)
T ss_pred             HHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHH----HHhcCc--EEEEEecC-CCCCcCHHHHHHhcCC-CceEEEEE
Confidence            9888888   699999999999998887655421    122354  66666677 6799999999999988 99999998


Q ss_pred             CC-CCC-CCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhH
Q 009673          259 AS-AYP-RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVE  335 (529)
Q Consensus       259 ~s-~~p-~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~  335 (529)
                      .- |.. ...|+++|.++|+++|+++++|++|+.|....++...   ++|++++|.||||.||.| |+++++++      
T Consensus       170 ~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l---~~Df~afsgHKwl~gP~GiGvLy~r~~------  240 (405)
T COG0520         170 HVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQEL---GCDFLAFSGHKWLLGPTGIGVLYVRKE------  240 (405)
T ss_pred             CccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhc---CCCEEEEcccccccCCCceEEEEEchH------
Confidence            43 333 3889999999999999999999999999875554322   699999999999999998 99999984      


Q ss_pred             HHhhhcc---------------------cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-c
Q 009673          336 LESAINN---------------------AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-L  393 (529)
Q Consensus       336 l~~~i~~---------------------~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~  393 (529)
                      +.+.+..                     ....+..|+|+.....++..|++.++..++.+..++..+.++++.+.|.+ .
T Consensus       241 ~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~  320 (405)
T COG0520         241 LLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELP  320 (405)
T ss_pred             HHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCC
Confidence            4333311                     11122368999999999999999888777888889999999999999988 5


Q ss_pred             CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCC---CCCCCCCCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673          394 GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSV---PGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA  470 (529)
Q Consensus       394 G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~---Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la  470 (529)
                      ++.++.+.......++.+.-.+++..++...|.+.||.++.+..   |...--..++.+|+|+..++|    ++|+++++
T Consensus       321 ~v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt----~edid~l~  396 (405)
T COG0520         321 GVEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNT----EEDVDRLL  396 (405)
T ss_pred             CeEEecCCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCC----HHHHHHHH
Confidence            78888754322334444444567889999999999999976532   221111124459999998886    89999999


Q ss_pred             HHHHHHHH
Q 009673          471 DFIHEGVE  478 (529)
Q Consensus       471 ~~i~~~~~  478 (529)
                      +.|+++..
T Consensus       397 ~aL~~~~~  404 (405)
T COG0520         397 EALKKALA  404 (405)
T ss_pred             HHHHHHhh
Confidence            99988653

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=99.97  E-value=5.5e-28  Score=250.32  Aligned_cols=331  Identities=17%  Similarity=0.123  Sum_probs=235.1

Q ss_pred             eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 009673          105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV  184 (529)
Q Consensus       105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~  184 (529)
                      +++++++..+|++|++++...+..     +   ++.   . ..++.+.+++++++++|++.++  ..+.+.+|++|+..+
T Consensus         1 ~~~~~~~~~~~~~v~~a~~~~~~~-----~---~~~---~-~~~~~~~~~~~la~~~g~~~~~--~~~~~~~~t~al~~~   66 (356)
T cd06451           1 LLLIPGPSNVPPRVLKAMNRPMLG-----H---RSP---E-FLALMDEILEGLRYVFQTENGL--TFLLSGSGTGAMEAA   66 (356)
T ss_pred             CcccCCCcCCCHHHHHHhCCCccC-----C---CCH---H-HHHHHHHHHHHHHHHhcCCCCC--EEEEecCcHHHHHHH
Confidence            467899999999999999754321     1   111   1 2233334568999999996432  234456678999999


Q ss_pred             HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC
Q 009673          185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR  264 (529)
Q Consensus       185 l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~  264 (529)
                      +.++++|||+|++.++.|.++   .+.   ..+...|.  +++.+++++ ++.+|++++++.+++++|++|++++++|++
T Consensus        67 ~~~~~~~g~~vl~~~~~~~~~---~~~---~~~~~~g~--~~~~v~~~~-~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~  137 (356)
T cd06451          67 LSNLLEPGDKVLVGVNGVFGD---RWA---DMAERYGA--DVDVVEKPW-GEAVSPEEIAEALEQHDIKAVTLTHNETST  137 (356)
T ss_pred             HHHhCCCCCEEEEecCCchhH---HHH---HHHHHhCC--CeEEeecCC-CCCCCHHHHHHHHhccCCCEEEEeccCCCc
Confidence            999999999999988755432   110   12233454  555666653 578999999999976689999888776654


Q ss_pred             --CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhc
Q 009673          265 --DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN  341 (529)
Q Consensus       265 --~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~  341 (529)
                        ..|+++|.++|+++|+++++|++|+.|....+...   .++|++++|+||||.+|.| |+++.++      ++.+.+.
T Consensus       138 G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~---~~~d~~~~s~~K~l~~p~g~G~l~~~~------~~~~~~~  208 (356)
T cd06451         138 GVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDE---WGVDVAYTGSQKALGAPPGLGPIAFSE------RALERIK  208 (356)
T ss_pred             ccccCHHHHHHHHHhcCCEEEEeeehhccCccccccc---cCccEEEecCchhccCCCCcceeEECH------HHHHHHH
Confidence              78999999999999999999999887754322111   1579999999999998877 9999987      5554443


Q ss_pred             c--ccc----------------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCC-C
Q 009673          342 N--AVF----------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG-S  402 (529)
Q Consensus       342 ~--~~~----------------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~g-t  402 (529)
                      .  ...                ....++++...++++..+++.+...+++...++..++++++.+.|.+.|+++..+. .
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~  288 (356)
T cd06451         209 KKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAKPEL  288 (356)
T ss_pred             hcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCccc
Confidence            2  000                02345677877888888888766666778888999999999999998898887531 1


Q ss_pred             -CCceEEEccCCCCCcHHHHHHhHhcC-CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          403 -DNHLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       403 -~~~~~~v~~~~~~i~~~~~~~~L~~~-GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                       .+.+.++.+ +.+.+...+.+.|.+. ||.+..+.    . +..+++||++...++    +++|++++++.|++++
T Consensus       289 ~~~~~~~~~~-~~~~~~~~~~~~L~~~~gI~~~~g~----~-~~~~~~iRis~~~~~----~~e~v~~~~~~l~~~~  355 (356)
T cd06451         289 RSPTVTAVLV-PEGVDGDEVVRRLMKRYNIEIAGGL----G-PTAGKVFRIGHMGEA----TREDVLGVLSALEEAL  355 (356)
T ss_pred             CCCceEEEEC-CCCCCHHHHHHHHHHhCCEEEeccc----c-cccCCEEEEecCCCC----CHHHHHHHHHHHHHHh
Confidence             122234444 3355677888888777 99996432    1 223568999987654    4899999999998865

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=99.96  E-value=1.3e-27  Score=251.79  Aligned_cols=343  Identities=20%  Similarity=0.244  Sum_probs=244.1

Q ss_pred             ceeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHcCC-CCCCCceeeecCChH-H
Q 009673          104 SLELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGS-P  179 (529)
Q Consensus       104 ~i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~-r~~~g~~~~d~lE~~a~~~la~~~g~-~~~~~~~~V~~~sGs-~  179 (529)
                      .+.|. ++..++|+.|.+++...+.+.+  +.+.. .+..+..+.+.++ .+++.+++++|+ +++    +|..++|+ +
T Consensus        20 ~~yld~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~----~i~~~~~~t~   92 (401)
T PRK10874         20 GVYLDSAATALKPQAVIEATQQFYSLSA--GNVHRSQFAAAQRLTARYE-AAREQVAQLLNAPDAK----NIVWTRGTTE   92 (401)
T ss_pred             eEEEeCCcccCCCHHHHHHHHHHHHhcc--CCCCCcccHHHHHHHHHHH-HHHHHHHHHcCCCCCC----EEEEECCHHH
Confidence            46665 4556889999999988886543  33321 1222344455555 567899999999 554    34445555 8


Q ss_pred             HHHHHHHhh----cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673          180 ANFEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI  255 (529)
Q Consensus       180 A~~~~l~al----l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI  255 (529)
                      ++..++.++    ++|||+|++++++|.+.+....    ......|.  +++.++++ +++.+|++++++.+++ +|++|
T Consensus        93 ~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~i~~-~t~lv  164 (401)
T PRK10874         93 SINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWL----MVAQQTGA--KVVKLPLG-ADRLPDVDLLPELITP-RTRIL  164 (401)
T ss_pred             HHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHH----HHHHHhCC--EEEEEecC-CCCcCCHHHHHHhcCc-CcEEE
Confidence            888888887    4899999999998866432111    11233454  55566665 4578999999999987 89999


Q ss_pred             EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcc
Q 009673          256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVL  332 (529)
Q Consensus       256 i~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~  332 (529)
                      ++++++|++  ..|+++|.++|+++|+++++|++|+.|....+....   ++|++++|+||+ .||.| |++++++    
T Consensus       165 ~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~---~~d~~~~s~~K~-~gp~G~G~l~~~~----  236 (401)
T PRK10874        165 ALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQAL---DIDFYAFSGHKL-YGPTGIGVLYGKS----  236 (401)
T ss_pred             EEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhc---CCCEEEEecccc-cCCCccEEEEEch----
Confidence            998887775  789999999999999999999999877654332111   589999999995 57888 9999987    


Q ss_pred             hhHHHhhhcccc--------------------cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673          333 GVELESAINNAV--------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE  392 (529)
Q Consensus       333 ~~~l~~~i~~~~--------------------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~  392 (529)
                        ++.+.+....                    .....|+|+...++++..|++.+...++....+++.+.++++.+.|++
T Consensus       237 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~  314 (401)
T PRK10874        237 --ELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAK  314 (401)
T ss_pred             --HHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence              4544433111                    112357888889999998988776666677778888888999999988


Q ss_pred             c-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC---CCCCCCeEEEccCCCccCCCCHHHHHH
Q 009673          393 L-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVA  468 (529)
Q Consensus       393 ~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~---~~~~~~~iRig~~~~tt~g~~~~d~~~  468 (529)
                      . |+.++.+. .+.++.+.+.  +++.+++.+.|.++||.++.+..+...   .....++||||+..++|    ++|+++
T Consensus       315 ~~g~~~~~~~-~~~i~~~~~~--~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt----~edid~  387 (401)
T PRK10874        315 LPGFRSFRCQ-DSSLLAFDFA--GVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNT----QSDVDA  387 (401)
T ss_pred             CCCEEEeCCC-CCcEEEEEEC--CcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCC----HHHHHH
Confidence            4 88876532 2445555553  456778888999999999654322100   00124789999987765    899999


Q ss_pred             HHHHHHHHHH
Q 009673          469 IADFIHEGVE  478 (529)
Q Consensus       469 la~~i~~~~~  478 (529)
                      +++.|++++.
T Consensus       388 ll~al~~~~~  397 (401)
T PRK10874        388 LVNAVDRALE  397 (401)
T ss_pred             HHHHHHHHHH
Confidence            9999998765

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=99.96  E-value=7.7e-28  Score=242.52  Aligned_cols=340  Identities=21%  Similarity=0.240  Sum_probs=251.1

Q ss_pred             CCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhh-
Q 009673          111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI-  188 (529)
Q Consensus       111 en~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~al-  188 (529)
                      ..++.++|+++|..+++..|  |+|.+-+..|.+..+.+| .+++.+++++|+++.+    |..|||. ++|..++.+. 
T Consensus        10 TTp~~~~v~~~m~~~~~~~f--gNPsS~H~~G~~A~~~ve-~AR~~iA~llga~~~e----IiFTSG~TEsnNlaI~g~~   82 (386)
T COG1104          10 TTPVDPEVLEAMLPYLTEVF--GNPSSLHSFGREARKAVE-EAREQIAKLLGADPEE----IIFTSGATESNNLAIKGAA   82 (386)
T ss_pred             cCCCCHHHHHHHHHHHHhhc--CCccchhHhHHHHHHHHH-HHHHHHHHHhCCCCCe----EEEecCCcHHHHHHHHhhH
Confidence            45789999999999998775  788776666777667777 6899999999999863    4456665 9999888763 


Q ss_pred             -c----CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC-
Q 009673          189 -L----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-  262 (529)
Q Consensus       189 -l----~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~-  262 (529)
                       .    +.|.+|+++..+|.+.+....+     ....|  +++-+++++ .+|.+|+++|++++++ ++-+|.+.+.|| 
T Consensus        83 ~a~~~~~~~~HIIts~iEH~aVl~~~~~-----Le~~g--~~Vtyl~V~-~~G~v~~e~L~~al~~-~T~LVSim~aNnE  153 (386)
T COG1104          83 LAYRNAQKGKHIITSAIEHPAVLNTCRY-----LERQG--FEVTYLPVD-SNGLVDLEQLEEALRP-DTILVSIMHANNE  153 (386)
T ss_pred             HhhhcccCCCeEEEcccccHHHHHHHHH-----HHhcC--CeEEEeCCC-CCCeEcHHHHHHhcCC-CceEEEEEecccC
Confidence             2    2578999999999877643321     11123  577788887 4799999999999987 788877765554 


Q ss_pred             -CCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh
Q 009673          263 -PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI  340 (529)
Q Consensus       263 -p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i  340 (529)
                       ++++|+++|.++|+++|+++++|++|+.|-++.+....   ++|++++|.||. .||+| |+++.+++.    .+...+
T Consensus       154 ~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~---~vD~ls~SaHK~-~GpkGiGaLyv~~~~----~~~p~i  225 (386)
T COG1104         154 TGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEEL---GVDLLSFSAHKF-GGPKGIGALYVRPGV----RLEPLI  225 (386)
T ss_pred             eeecccHHHHHHHHHHcCCeEEEehhhhcCceecccccc---CcceEEeehhhc-cCCCceEEEEECCCC----ccCcee
Confidence             45999999999999999999999999999876543332   489999999994 69999 999997742    111111


Q ss_pred             cc-cccC-CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cCcEEecCC--CCCceEEEccCCC
Q 009673          341 NN-AVFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGG--SDNHLVLVDLRPM  414 (529)
Q Consensus       341 ~~-~~~p-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G~~v~~~g--t~~~~~~v~~~~~  414 (529)
                      .- .... .-.|+.+.+.+++++.|++... .+++....++...+++|.+.|.+  .++.+....  .-.|.+.+.+  .
T Consensus       226 ~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~-~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f--~  302 (386)
T COG1104         226 HGGGQERGLRSGTENVPGIVGFGKAAEIAV-EELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSF--P  302 (386)
T ss_pred             ccCcCCCCCCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEe--C
Confidence            10 0111 1268889999999999998775 56778888899999999999987  344444321  1223333333  4


Q ss_pred             CCcHHHHHHhHhcCCeEEcCCCC-------CCCC-------CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          415 GIDGARVEKILDMASITLNKNSV-------PGDK-------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       415 ~i~~~~~~~~L~~~GI~v~~~~~-------Pg~~-------~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      ++.++.+...|+.+||.++.++-       |.+.       .....+.||||+...||    ++|++++++.+.++++..
T Consensus       303 gv~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt----~eei~~~~~~l~~~i~~l  378 (386)
T COG1104         303 GVEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTT----EEEIDAAAEALKEIIKRL  378 (386)
T ss_pred             CCcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCC----HHHHHHHHHHHHHHHHHH
Confidence            67889999999999999987642       1110       01223679999987765    899999999999999865


Q ss_pred             H
Q 009673          481 L  481 (529)
Q Consensus       481 ~  481 (529)
                      .
T Consensus       379 r  379 (386)
T COG1104         379 R  379 (386)
T ss_pred             h
Confidence            3

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=99.96  E-value=1.2e-27  Score=254.27  Aligned_cols=341  Identities=17%  Similarity=0.211  Sum_probs=238.6

Q ss_pred             cceeEecCCC---CCcH----HHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecC
Q 009673          103 KSLELIASEN---FTSR----AVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL  175 (529)
Q Consensus       103 ~~i~L~asen---~~~~----~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~  175 (529)
                      +.++|..++.   +.++    ++.+++...+....       ..|++...+.+++    +.+++++|.+.    + +.++
T Consensus        37 ~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~-------~~Y~~~~g~~~Lr----eaia~~~~~~~----v-v~t~  100 (460)
T PRK13238         37 NPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGD-------EAYAGSRSYYRLE----DAVKDIFGYPY----T-IPTH  100 (460)
T ss_pred             CEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCC-------cccCCCCCHHHHH----HHHHHHhCCCc----E-EECC
Confidence            5677777664   3332    46777766664221       2355555677777    56778888764    2 4556


Q ss_pred             ChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC---------CCCCCCHHHHHHH
Q 009673          176 SGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE---------STGLVDYDMLEKT  246 (529)
Q Consensus       176 sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~---------~~~~iD~d~le~~  246 (529)
                      +|++|+..++.++++||| |++++|.+..+        ...+...|.  +++.+++++         .++.+|+++|++.
T Consensus       101 ggt~A~~~~~~all~pGD-Vii~~p~~~~~--------~~~i~~~G~--~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~  169 (460)
T PRK13238        101 QGRAAEQILFPVLIKKGD-VVPSNYHFDTT--------RAHIELNGA--TAVDLVIDEALDTGSRHPFKGNFDLEKLEAL  169 (460)
T ss_pred             CHHHHHHHHHHHhCCCCC-EEccCCcccch--------HHHHHHcCC--EEEEEeccccccccccccccCCcCHHHHHHH
Confidence            777999999999999999 88776633322        123455665  666666642         1245999999999


Q ss_pred             hhhc---CCcEEEEcCCCCCC---CC---CHHHHHHHHHHhCCEEEEecccccc-cccc-----cccCCC--------CC
Q 009673          247 AILF---RPKLIIAGASAYPR---DF---DYPRMRQIADAVGALLMMDMAHISG-LVAA-----SVVADP--------FK  303 (529)
Q Consensus       247 i~~~---~pklIi~~~s~~p~---~~---d~~~i~~ia~~~g~~livD~ah~~G-li~~-----~~~~~~--------~~  303 (529)
                      +++.   ++++|+++.|+||+   ..   ++++|+++|++||++||+|++|+.+ +++.     +.....        ..
T Consensus       170 i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s  249 (460)
T PRK13238        170 IEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFS  249 (460)
T ss_pred             HhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcc
Confidence            9852   68999999888874   23   4679999999999999999998653 2221     111111        23


Q ss_pred             cccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcccccC--C--CCCCChHHHHHHHHHHHHHhcCchHHHHHHHH
Q 009673          304 YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFP--G--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV  379 (529)
Q Consensus       304 ~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p--~--~~g~p~~~~iaala~al~~~~~~~~~~~~~~i  379 (529)
                      ++|++++|++|.+.+|.||++++++.     ++.++++...+.  +  .+|+++...++|++.+|++...+   .|.+..
T Consensus       250 ~~D~~~~Sg~K~g~~~~GG~i~~~d~-----~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~---~~~~~~  321 (460)
T PRK13238        250 YADGLTMSAKKDAMVNIGGLLCFRDE-----DLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDE---DYLAYR  321 (460)
T ss_pred             cCcEEEEecccCCCCcceeEEEcChH-----HHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhCh---HHHHHH
Confidence            68999999999999999999999864     788877665422  2  35676777788888888775543   445555


Q ss_pred             HHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCC-------CC-cHHHHHHhHhcCCeEEcCCC---CCCCCC-----C
Q 009673          380 VSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM-------GI-DGARVEKILDMASITLNKNS---VPGDKS-----A  443 (529)
Q Consensus       380 ~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~-------~i-~~~~~~~~L~~~GI~v~~~~---~Pg~~~-----~  443 (529)
                      .+++++|.+.|.+.|++++.+ ...|++++|++..       +. +...+..++++.||.+....   .+.+..     .
T Consensus       322 ~~~~~~l~~~L~~~G~~~~~p-~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~  400 (460)
T PRK13238        322 IGQVEYLGEGLEEAGVPIQTP-AGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLP  400 (460)
T ss_pred             HHHHHHHHHHHHHCCCCeEcc-CCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccC
Confidence            667899999999999998865 3468899988642       12 23456788899999984432   222221     0


Q ss_pred             CCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHH
Q 009673          444 LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLE  482 (529)
Q Consensus       444 ~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~  482 (529)
                      -....+|++++   .|+++.+.++++++.|.++.++...
T Consensus       401 ~~~~~~Rla~~---rr~~~~~~~~~~~~~l~~~~~~~~~  436 (460)
T PRK13238        401 APAELLRLAIP---RRVYTQSHMDYVAEALKAVKENRES  436 (460)
T ss_pred             CccceEEEecc---cccCCHHHHHHHHHHHHHHHHhHhh
Confidence            12478999977   6889999999999999998866543

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=99.96  E-value=2.7e-27  Score=249.70  Aligned_cols=345  Identities=17%  Similarity=0.134  Sum_probs=241.8

Q ss_pred             ceeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC-CCCCCceeeecCChH-HH
Q 009673          104 SLELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGS-PA  180 (529)
Q Consensus       104 ~i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~-~~~~~~~~V~~~sGs-~A  180 (529)
                      .+.|. ++..++|+.|++++...+...+.....+ .+..+....+.++ .+++.+++++|. +++    +|..++|+ ++
T Consensus        24 ~iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~r~~la~~~~~~~~~----~v~~t~g~t~~   97 (406)
T PRK09295         24 LAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRG-IHTLSAQATEKME-NVRKQAALFINARSAE----ELVFVRGTTEG   97 (406)
T ss_pred             eEEEeCcccccCCHHHHHHHHHHHHhcCCCCCCc-ccHHHHHHHHHHH-HHHHHHHHHcCcCCCC----eEEEeCCHHHH
Confidence            36665 4567889999999988876444211112 1222334455555 467899999998 444    34456665 88


Q ss_pred             HHHHHHh----hcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673          181 NFEVYTA----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII  256 (529)
Q Consensus       181 ~~~~l~a----ll~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi  256 (529)
                      +..++.+    +++|||+|++.+++|.+.+....    ......|.  +++.++++ +++.+|+++|++.+++ ++++|+
T Consensus        98 l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~i~~-~t~lv~  169 (406)
T PRK09295         98 INLVANSWGNSNVRAGDNIIISEMEHHANIVPWQ----MLCARVGA--ELRVIPLN-PDGTLQLETLPALFDE-RTRLLA  169 (406)
T ss_pred             HHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHH----HHHHHcCc--EEEEEecC-CCCCCCHHHHHHhcCC-CcEEEE
Confidence            8888776    46899999999988765432211    11123454  55566665 4578999999999987 899999


Q ss_pred             EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcch
Q 009673          257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLG  333 (529)
Q Consensus       257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~  333 (529)
                      +++++|++  ..|+++|.++|+++|+++++|++|+.|....+...   .++|++++|+|| +.||.| |+++++++    
T Consensus       170 l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~---~~~D~~~~s~~K-~~gp~G~G~l~~~~~----  241 (406)
T PRK09295        170 ITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQA---LDCDFYVFSGHK-LYGPTGIGILYVKEA----  241 (406)
T ss_pred             EecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchh---cCCCEEEeehhh-ccCCCCcEEEEEchH----
Confidence            99877776  78999999999999999999999988765332211   158999999999 558888 99999873    


Q ss_pred             hHHHhhhccc---------------------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673          334 VELESAINNA---------------------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE  392 (529)
Q Consensus       334 ~~l~~~i~~~---------------------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~  392 (529)
                        +.+.+...                     ......|+++...++++..|++.+...+.+...++..+.++++.+.|.+
T Consensus       242 --~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~  319 (406)
T PRK09295        242 --LLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLES  319 (406)
T ss_pred             --hHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence              33322110                     0112367899999999999998877667777788888889999999987


Q ss_pred             c-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC---CCCCCCeEEEccCCCccCCCCHHHHHH
Q 009673          393 L-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVA  468 (529)
Q Consensus       393 ~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~---~~~~~~~iRig~~~~tt~g~~~~d~~~  468 (529)
                      . |++++.+....+++.+.+  .+.+++++.+.|++.||.++.+......   ....++.+|+|.+.++|    ++|+++
T Consensus       320 ~~~~~~~~~~~~~~iv~~~~--~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt----~~did~  393 (406)
T PRK09295        320 VPDLTLYGPQNRLGVIAFNL--GKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNT----HEEVDR  393 (406)
T ss_pred             CCCEEEeCCCCCceEEEEEE--CCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCC----HHHHHH
Confidence            4 788876422233443333  3456778888999999999654211000   00124679999988876    899999


Q ss_pred             HHHHHHHHHH
Q 009673          469 IADFIHEGVE  478 (529)
Q Consensus       469 la~~i~~~~~  478 (529)
                      +++.|+++..
T Consensus       394 l~~~l~~i~~  403 (406)
T PRK09295        394 LVAGLQRIHR  403 (406)
T ss_pred             HHHHHHHHHH
Confidence            9999988643

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=99.96  E-value=4.9e-27  Score=247.04  Aligned_cols=343  Identities=20%  Similarity=0.221  Sum_probs=241.1

Q ss_pred             ceeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCC-CCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChH-H
Q 009673          104 SLELI-ASENFTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGS-P  179 (529)
Q Consensus       104 ~i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~-~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs-~  179 (529)
                      .+.|. ++..++|+.|++++...+...+  +.+. ..+..+.++.+.++ .+++.+++++|++ ++    +|.+++|+ +
T Consensus        17 ~iyld~a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~----~i~~t~g~t~   89 (398)
T TIGR03392        17 TVYLDSAATALKPQAVIDATQQFYRLSS--GTVHRSQHQQAQSLTARYE-LARQQVARFLNAPDAE----NIVWTRGTTE   89 (398)
T ss_pred             eEEeeCccccCCCHHHHHHHHHHHHhcC--CCCCCcccHHHHHHHHHHH-HHHHHHHHHhCCCCCC----eEEEeCChHH
Confidence            46665 4556889999999988775433  2332 12223333334444 5678999999995 44    34445555 9


Q ss_pred             HHHHHHHhh----cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673          180 ANFEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI  255 (529)
Q Consensus       180 A~~~~l~al----l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI  255 (529)
                      ++..++.++    ++|||+|++.+++|.+.+....    ......|.  +++.++++ .++.+|++++++++++ ++++|
T Consensus        90 ~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~----~~~~~~g~--~v~~v~~~-~~~~~~~~~l~~~i~~-~t~lv  161 (398)
T TIGR03392        90 SINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWL----MVAQQTGA--KVVKLPIG-ADLLPDIRQLPELLTP-RTRIL  161 (398)
T ss_pred             HHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHH----HHHHHcCc--EEEEEecC-CCCCcCHHHHHHHhcc-CceEE
Confidence            999888887    5899999999998865432111    11233454  66666665 3478999999999987 89999


Q ss_pred             EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcc
Q 009673          256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVL  332 (529)
Q Consensus       256 i~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~  332 (529)
                      ++++++|++  ..|+++|.++|+++|+++++|++|+.|....+...   -++|++++|+||. .||.| |++++++    
T Consensus       162 ~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~---~~~d~~~~s~~K~-~gp~G~G~l~~~~----  233 (398)
T TIGR03392       162 ALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQA---LDIDFYAFSGHKL-YGPTGIGVLYGKT----  233 (398)
T ss_pred             EEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhh---cCCCEEEEecccc-cCCCceEEEEEcH----
Confidence            998877775  78999999999999999999999977754322211   1589999999995 47877 9999887    


Q ss_pred             hhHHHhhhcccc--------------------cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673          333 GVELESAINNAV--------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE  392 (529)
Q Consensus       333 ~~~l~~~i~~~~--------------------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~  392 (529)
                        ++.+.+....                    .....|+++...++++..+++.+...++++..++..+.++++.+.|.+
T Consensus       234 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~  311 (398)
T TIGR03392       234 --ELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQ  311 (398)
T ss_pred             --HHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence              4444442110                    111257889989999999998776666777778888888999999987


Q ss_pred             c-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC--CC-CCCCeEEEccCCCccCCCCHHHHHH
Q 009673          393 L-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK--SA-LVPGGIRIGSPAMTTRGFSEKEFVA  468 (529)
Q Consensus       393 ~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~--~~-~~~~~iRig~~~~tt~g~~~~d~~~  468 (529)
                      . |+.+.... .++++.+.+.  +++++++.+.|.++||.++.+......  .. ..+++||+|++.++|    ++|+++
T Consensus       312 l~g~~~~~~~-~~~i~~~~~~--~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t----~~ei~~  384 (398)
T TIGR03392       312 LPGFRSFRCP-GSSLLAFDFA--GVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNT----QQDVDA  384 (398)
T ss_pred             CCCeEEeCCC-CCcEEEEEeC--CcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCC----HHHHHH
Confidence            4 88876432 2444444443  556788888899999999754311000  00 024689999987765    899999


Q ss_pred             HHHHHHHHHH
Q 009673          469 IADFIHEGVE  478 (529)
Q Consensus       469 la~~i~~~~~  478 (529)
                      +++.|+++++
T Consensus       385 l~~~l~~~~~  394 (398)
T TIGR03392       385 LVDAVGAALE  394 (398)
T ss_pred             HHHHHHHHHH
Confidence            9999998765

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=99.96  E-value=1e-26  Score=244.93  Aligned_cols=344  Identities=19%  Similarity=0.193  Sum_probs=239.5

Q ss_pred             ceeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCCC-CCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChH-H
Q 009673          104 SLELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGS-P  179 (529)
Q Consensus       104 ~i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~r-~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs-~  179 (529)
                      .+.|. ++..++|+.|.+++...+...+.  .+... ++.+..+.+.++ .+++.+++++|++ ++    +|..++|+ +
T Consensus        19 ~~yld~~~~~~~p~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~r~~ia~~~~~~~~~----~v~~~~g~t~   91 (403)
T TIGR01979        19 LVYLDSAATSQKPQQVIDAVAEYYRNSNA--NVHRGIHTLSVRATEAYE-AVREKVAKFINAASDE----EIVFTRGTTE   91 (403)
T ss_pred             eEEEeCccccCCCHHHHHHHHHHHHhCCC--CCCCCccHHHHHHHHHHH-HHHHHHHHHhCcCCCC----eEEEeCCHHH
Confidence            36665 35568899999999877765542  22211 122223333444 5678899999998 43    34455655 8


Q ss_pred             HHHHHHHhh----cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673          180 ANFEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI  255 (529)
Q Consensus       180 A~~~~l~al----l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI  255 (529)
                      ++..++.++    ++|||+|++.+++|.+++....    ......|.  +++.++++ +++.+|++++++.+++ +|++|
T Consensus        92 ~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~----~~~~~~g~--~~~~v~~~-~~~~~~~~~l~~~i~~-~~~lv  163 (403)
T TIGR01979        92 SINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQ----LLAERTGA--TLKFIPLD-DDGTLDLDDLEKLLTE-KTKLV  163 (403)
T ss_pred             HHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHH----HHHHhcCc--EEEEEecC-CCCCCCHHHHHHHhcc-CCeEE
Confidence            888777764    6899999999998876532211    12223454  55566666 5688999999999987 89999


Q ss_pred             EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcc
Q 009673          256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVL  332 (529)
Q Consensus       256 i~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~  332 (529)
                      ++++++|++  ..|+++|.++|+++|+++++|++|+.|....+...   .++|++++|+||++ ||.| |++++++    
T Consensus       164 ~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~---~~~d~~~~s~~K~~-gp~G~g~l~~~~----  235 (403)
T TIGR01979       164 AITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQA---LDCDFYVFSGHKMY-GPTGIGVLYGKE----  235 (403)
T ss_pred             EEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCccc---cCCCEEEEeccccc-CCCCceEEEEch----
Confidence            998777665  78999999999999999999999988765332211   15899999999976 7887 9999987    


Q ss_pred             hhHHHhhhcccc--------------------cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673          333 GVELESAINNAV--------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE  392 (529)
Q Consensus       333 ~~~l~~~i~~~~--------------------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~  392 (529)
                        ++.+.+....                    .....|+++...++++..+++.+...+++...+++.+.++.+.+.|++
T Consensus       236 --~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~  313 (403)
T TIGR01979       236 --ELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGE  313 (403)
T ss_pred             --HHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence              4444332110                    111257888888888888888776556778888899999999999987


Q ss_pred             c-CcEEecCCC---CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCC---CCCCCCCeEEEccCCCccCCCCHHH
Q 009673          393 L-GYKLVSGGS---DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD---KSALVPGGIRIGSPAMTTRGFSEKE  465 (529)
Q Consensus       393 ~-G~~v~~~gt---~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~---~~~~~~~~iRig~~~~tt~g~~~~d  465 (529)
                      . |++++.+..   ..+++.+.+.  +++..++.+.|+++||.++.+.....   .....++.+||+++.+++    ++|
T Consensus       314 ~~g~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t----~~d  387 (403)
T TIGR01979       314 IPGLRIYGPRDAEDRGGIISFNVE--GVHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNT----EED  387 (403)
T ss_pred             CCCEEEeCCCCccccCceEEEEeC--CcCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCC----HHH
Confidence            4 888876421   1345555543  34667888899999999964321000   000124789999887764    799


Q ss_pred             HHHHHHHHHHHHH
Q 009673          466 FVAIADFIHEGVE  478 (529)
Q Consensus       466 ~~~la~~i~~~~~  478 (529)
                      +++++++|+++++
T Consensus       388 i~~l~~~l~~~~~  400 (403)
T TIGR01979       388 IDALVEALKKVRK  400 (403)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999987664

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=99.96  E-value=9.7e-27  Score=246.79  Aligned_cols=347  Identities=17%  Similarity=0.136  Sum_probs=240.9

Q ss_pred             ceeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC-CCCceeeecCChH-HH
Q 009673          104 SLELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSGS-PA  180 (529)
Q Consensus       104 ~i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~-~~~~~~V~~~sGs-~A  180 (529)
                      .+.|. ++..++|+.|++++...+...+.....+ .++.+.+..+.++ .+++.+++++|++. +    +|.+++|+ ++
T Consensus        33 ~iyLd~a~~~~~p~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~r~~la~~~~~~~~~----~v~~t~g~t~a  106 (424)
T PLN02855         33 LVYLDNAATSQKPAAVLDALQDYYEEYNSNVHRG-IHALSAKATDAYE-LARKKVAAFINASTSR----EIVFTRNATEA  106 (424)
T ss_pred             eEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCc-cchHHHHHHHHHH-HHHHHHHHHcCCCCCC----EEEEeCCHHHH
Confidence            46664 3456789999999988775443211111 1232333444444 56789999999963 3    34445555 88


Q ss_pred             HHHHHHh----hcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673          181 NFEVYTA----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII  256 (529)
Q Consensus       181 ~~~~l~a----ll~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi  256 (529)
                      +..++.+    .++|||+|++++++|.+.+....    ......|.  +++.+++++ ++.+|++++++.+++ ++++|+
T Consensus       107 l~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~a~~~g~--~v~~v~~~~-~~~~~~~~l~~~i~~-~t~lv~  178 (424)
T PLN02855        107 INLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQ----LVAQKTGA--VLKFVGLTP-DEVLDVEQLKELLSE-KTKLVA  178 (424)
T ss_pred             HHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHH----HHHHHcCC--EEEEEecCC-CCCcCHHHHHHHhcc-CceEEE
Confidence            8877765    36899999999998875532111    11123354  555666653 456999999999987 899999


Q ss_pred             EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcch
Q 009673          257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLG  333 (529)
Q Consensus       257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~  333 (529)
                      +++++|++  ..|+++|.++|+++|+++++|++|+.|.+..+....   ++|++++|+|| +.||.| |++++++     
T Consensus       179 i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~---~~d~~~~s~~K-~~gp~G~G~l~~~~-----  249 (424)
T PLN02855        179 THHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTL---GADFLVASSHK-MCGPTGIGFLWGKS-----  249 (424)
T ss_pred             EeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhc---CCCEEEeeccc-ccCCCccEEEEEch-----
Confidence            98877765  789999999999999999999999877653322111   57999999999 568887 9999987     


Q ss_pred             hHHHhhhccc--------------------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc
Q 009673          334 VELESAINNA--------------------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL  393 (529)
Q Consensus       334 ~~l~~~i~~~--------------------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~  393 (529)
                       ++.+++...                    ......|+++...++++..+++.+...++++..+++.+.++.+.+.|.+.
T Consensus       250 -~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~  328 (424)
T PLN02855        250 -DLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSV  328 (424)
T ss_pred             -hhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC
Confidence             343333211                    00123678999999999999987766677888888889999999999874


Q ss_pred             -CcEEecCCC-----CCceEEEccCCCCCcHHHHHHhHhcC-CeEEcCCCCC---CCCCCCCCCeEEEccCCCccCCCCH
Q 009673          394 -GYKLVSGGS-----DNHLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVP---GDKSALVPGGIRIGSPAMTTRGFSE  463 (529)
Q Consensus       394 -G~~v~~~gt-----~~~~~~v~~~~~~i~~~~~~~~L~~~-GI~v~~~~~P---g~~~~~~~~~iRig~~~~tt~g~~~  463 (529)
                       |++++.+..     ...++.+.+  .+++.+++.+.|.+. ||.++.+..-   ....-..++.||||++.++|    +
T Consensus       329 ~g~~i~~~~~~~~~~r~~~v~~~~--~~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt----~  402 (424)
T PLN02855        329 PGVRIYGPKPSEGVGRAALCAFNV--EGIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNT----K  402 (424)
T ss_pred             CCEEEeCCCcccccCcccEEEEEE--CCcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCC----H
Confidence             888886421     123344443  345677888889776 9998753210   00000113679999988876    7


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 009673          464 KEFVAIADFIHEGVEIT  480 (529)
Q Consensus       464 ~d~~~la~~i~~~~~~~  480 (529)
                      +|++++++.|+++++..
T Consensus       403 ~di~~l~~~l~~~~~~~  419 (424)
T PLN02855        403 EEVDAFIHALKDTIAFF  419 (424)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999988754

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=99.96  E-value=1.2e-26  Score=229.39  Aligned_cols=337  Identities=19%  Similarity=0.232  Sum_probs=245.4

Q ss_pred             cceeEecCC-C-CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC-CCCceeeecCChH-
Q 009673          103 KSLELIASE-N-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSGS-  178 (529)
Q Consensus       103 ~~i~L~ase-n-~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~-~~~~~~V~~~sGs-  178 (529)
                      +.|.|-..+ . .+||.|++|+...+.+. -.|||.    .    -+++-+..++|.++.++.+. .+|   |..+.|- 
T Consensus        26 DvlPmWVADMDf~~pp~i~~Al~~rvdhG-vfGY~~----~----~~~~~~ai~~w~~~r~~~~i~~e~---i~~~p~VV   93 (388)
T COG1168          26 DVLPMWVADMDFPTPPEIIEALRERVDHG-VFGYPY----G----SDELYAAIAHWFKQRHQWEIKPEW---IVFVPGVV   93 (388)
T ss_pred             CcceeeeecccCCCCHHHHHHHHHHHhcC-CCCCCC----C----CHHHHHHHHHHHHHhcCCCCCcce---EEEcCcch
Confidence            567776666 3 58999999999888765 236763    1    12344456699999998874 333   3345555 


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCC--CCCCHHHHHHHhhhcCCcEEE
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST--GLVDYDMLEKTAILFRPKLII  256 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~--~~iD~d~le~~i~~~~pklIi  256 (529)
                      .++..++.++.+|||.|++..|.|...+        +.+...|.  ++++.|+..++  +.+|+++||+.+.+.++|+.+
T Consensus        94 pgi~~~I~~~T~~gd~Vvi~tPvY~PF~--------~~i~~n~R--~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~i  163 (388)
T COG1168          94 PGISLAIRALTKPGDGVVIQTPVYPPFY--------NAIKLNGR--KVIENPLVEDDGRYEIDFDALEKAFVDERVKLFI  163 (388)
T ss_pred             HhHHHHHHHhCcCCCeeEecCCCchHHH--------HHHhhcCc--EEEeccccccCCcEEecHHHHHHHHhcCCccEEE
Confidence            9999999999999999999998764332        35666676  66666665444  578999999999887889999


Q ss_pred             EcCCCCCC--C---CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-----ccc--EEEecccccc--cCCCCe
Q 009673          257 AGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-----YCD--VVTTTTHKSL--RGPRGG  322 (529)
Q Consensus       257 ~~~s~~p~--~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-----~aD--iv~~S~hK~l--~GprgG  322 (529)
                      +++|+||+  .   .++.+|.+||.+||+.||+|+.|. .++..|..+.|+.     .+|  +++.|.+|+|  +|.+.+
T Consensus       164 LCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHa-Dlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a  242 (388)
T COG1168         164 LCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHA-DLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCA  242 (388)
T ss_pred             EeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccc-cccccCCCccchhhcChhhhcceEEEeeccccccchhhhhe
Confidence            99999997  3   368889999999999999999985 5666663333331     345  7778999996  888888


Q ss_pred             EEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cCcEEecC
Q 009673          323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSG  400 (529)
Q Consensus       323 ~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G~~v~~~  400 (529)
                      .++..++     +++.+..+......+++|+...+.|..+|.++- .+++.+..+.+.+|++++.+.|.+  +++++..+
T Consensus       243 ~~Ii~n~-----~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G-~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p  316 (388)
T COG1168         243 YIIISNR-----ELRAKFLKRLKRNGLHGPSALGIIATEAAYNQG-EPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEP  316 (388)
T ss_pred             eEEecCH-----HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecC
Confidence            7777664     554444333333446778888888888888864 355688899999999999999988  48888765


Q ss_pred             CCCCceEEEccCCCCCcHHHHHHh-HhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          401 GSDNHLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       401 gt~~~~~~v~~~~~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                       ..+++.|+|++..+++..++.+. |++++|.++.+...|   +.+.+.+|+.+  .    ++.+-+++..+.|+.+++
T Consensus       317 -~gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG---~~g~gf~RlN~--a----cpr~~L~eal~ri~~al~  385 (388)
T COG1168         317 -QGTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFG---EEGSGFVRLNF--A----CPRAILEEALERLKRALK  385 (388)
T ss_pred             -CCceeeeeeccccCCChHHHHHHHHHhhcEeccCCCccC---cCCCceEEEec--C----CCHHHHHHHHHHHHHHHh
Confidence             24688999999999987666555 588999998765444   34568899875  2    334555555555555443

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.96  E-value=3.6e-26  Score=240.50  Aligned_cols=333  Identities=16%  Similarity=0.136  Sum_probs=240.2

Q ss_pred             eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 009673          105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV  184 (529)
Q Consensus       105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~  184 (529)
                      +.+++++..++++|++++...+.+..           ...+ .++-+.+++++++++|++.++  +.+.+++|++++..+
T Consensus        11 ~l~~pGP~~~~~~V~~a~~~~~~~~~-----------~~~~-~~~~~~~~~~l~~~~g~~~~~--~vi~~~~gt~a~~~a   76 (401)
T PLN02409         11 HLFVPGPVNIPERVLRAMNRPNEDHR-----------SPAF-PALTKELLEDVKYIFKTKSGT--PFIFPTTGTGAWESA   76 (401)
T ss_pred             eeccCCCCCCCHHHHHHhcCCCCCCC-----------CHHH-HHHHHHHHHHHHHHhCCCCCC--EEEEeCCcHHHHHHH
Confidence            55678888899999999976543211           1223 344446779999999997643  346667788999999


Q ss_pred             HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEEEEcCCC
Q 009673          185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAGASA  261 (529)
Q Consensus       185 l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~---~~pklIi~~~s~  261 (529)
                      +..+++|||+|++.++.|.+.   .+.   ..+...|.  +++.++.+. +..+|++++++.+++   .++++|+++++.
T Consensus        77 ~~~~~~~Gd~Vlv~~~~~~~~---~~~---~~~~~~g~--~v~~v~~~~-~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~  147 (401)
T PLN02409         77 LTNTLSPGDKVVSFRIGQFSL---LWI---DQMQRLNF--DVDVVESPW-GQGADLDILKSKLRQDTNHKIKAVCVVHNE  147 (401)
T ss_pred             HHhcCCCCCEEEEeCCCchhH---HHH---HHHHHcCC--ceEEEECCC-CCCCCHHHHHHHHhhCcCCCccEEEEEeec
Confidence            999999999999998755332   110   12233454  555555553 345899999999986   378999998766


Q ss_pred             CCC--CCCHHHHHHH--HHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHH
Q 009673          262 YPR--DFDYPRMRQI--ADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL  336 (529)
Q Consensus       262 ~p~--~~d~~~i~~i--a~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l  336 (529)
                      +++  ..|+++|.++  |+++|+++++|++|+.|....+....   ++|++++|+||||.||.| |+++.++      ++
T Consensus       148 ~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~---~~D~~~~s~~K~l~~P~G~G~l~~~~------~~  218 (401)
T PLN02409        148 TSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEW---GVDVALTGSQKALSLPTGLGIVCASP------KA  218 (401)
T ss_pred             ccccccCCHHHHHHHHhhhccCcEEEEEcccccCCcccccccc---CccEEEEcCccccCcCCCcceeEECH------HH
Confidence            555  7899999999  99999999999998877553322111   589999999999999887 9999987      44


Q ss_pred             Hhhhcccc----c-----------C--CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec
Q 009673          337 ESAINNAV----F-----------P--GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS  399 (529)
Q Consensus       337 ~~~i~~~~----~-----------p--~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~  399 (529)
                      .+++....    +           .  ...++|+...+.++..+++.+...++++..++..+.++++.+.|.+.|++++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~  298 (401)
T PLN02409        219 LEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCT  298 (401)
T ss_pred             HHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeecc
Confidence            44433210    0           0  01347888889999999998776778888899999999999999889999886


Q ss_pred             CCCC--C-ceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          400 GGSD--N-HLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       400 ~gt~--~-~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      +...  . .+.++.+ +.+++..++.+.| +++||.+..+.     ++.....||||+..+++    ++|+..+..+|.+
T Consensus       299 ~~~~~~s~~v~~~~~-p~~~~~~~l~~~l~~~~~i~i~~G~-----~~~~~~~~Rig~~g~~~----~~~~~~~~~~~~~  368 (401)
T PLN02409        299 KKPEWRSDTVTAVVV-PEGIDSAEIVKNAWKKYNLSLGLGL-----NKVAGKVFRIGHLGNVN----ELQLLGALAGVEM  368 (401)
T ss_pred             CChhhcccceEEEeC-CCCCCHHHHHHHHHHhCCEEEEcCC-----CcccCCEEEEcCCCCCC----HHHHHHHHHHHHH
Confidence            4211  1 2233433 3567777776554 78899996532     22345789999987654    7999999999999


Q ss_pred             HHHH
Q 009673          476 GVEI  479 (529)
Q Consensus       476 ~~~~  479 (529)
                      ++..
T Consensus       369 ~l~~  372 (401)
T PLN02409        369 VLKD  372 (401)
T ss_pred             HHHH
Confidence            8864

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=99.96  E-value=1.9e-26  Score=242.46  Aligned_cols=337  Identities=20%  Similarity=0.216  Sum_probs=227.9

Q ss_pred             eeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHH
Q 009673          105 LELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANF  182 (529)
Q Consensus       105 i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~  182 (529)
                      +.|. ++..++|+.+++++...+.....  .++.. |.......++.+.+++.+++++|+++++    |..++|+ +++.
T Consensus        19 ~yl~~~~~~~~p~~v~~a~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~l~~~ia~~~~~~~~~----v~~~~~~t~~l~   91 (397)
T TIGR01976        19 VFFDNPAGTQIPQSVADAVSAALTRSNA--NRGGA-YESSRRADQVVDDAREAVADLLNADPPE----VVFGANATSLTF   91 (397)
T ss_pred             EEecCCccCCCCHHHHHHHHHHHHhcCC--CCCCC-chHHHHHHHHHHHHHHHHHHHcCCCCCe----EEEeCCHHHHHH
Confidence            5553 56667899999999887754321  12111 1111222233335668899999998652    4445554 7776


Q ss_pred             HHHHhh---cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          183 EVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       183 ~~l~al---l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      .++.++   ++|||+|++.+++|.+++....    ......|.  +++.++++++++.+|++++++.+++ ++++|++++
T Consensus        92 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~~~~~g~--~~~~~~~~~~~~~~~~~~l~~~i~~-~~~lv~i~~  164 (397)
T TIGR01976        92 LLSRAISRRWGPGDEVIVTRLDHEANISPWL----QAAERAGA--KVKWARVDEATGELHPDDLASLLSP-RTRLVAVTA  164 (397)
T ss_pred             HHHHHHHhcCCCCCEEEEcCCchHhHHHHHH----HHHHhcCC--EEEEEeccccCCCcCHHHHHHhcCC-CceEEEEeC
Confidence            666554   7899999999988766532110    11233454  5666666654688999999999987 899999988


Q ss_pred             CCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCeEEEeeCCCcchhHHH
Q 009673          260 SAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELE  337 (529)
Q Consensus       260 s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~  337 (529)
                      ++|++  ..|+++|.++|+++|+++++|++|+.|....+...   .++|++++|+||++ ||+.|++++++      ++.
T Consensus       165 ~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~---~~~d~~~~s~~K~~-g~~~G~l~~~~------~~~  234 (397)
T TIGR01976       165 ASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQA---TGADFLTCSAYKFF-GPHMGILWGRP------ELL  234 (397)
T ss_pred             CCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHH---cCCCEEEEechhhc-CCceEEEEEcH------HHH
Confidence            77775  78999999999999999999999976643222111   15899999999997 78899999987      555


Q ss_pred             hhhccccc---------CCCCCCChHHHHHHHHHHHHHhcCch--------------HHHHHHHHHHHHHHHHHHHHhc-
Q 009673          338 SAINNAVF---------PGLQGGPHNHTIGGLAVCLKHAQSPE--------------FKVYQNKVVSNCRALASRLVEL-  393 (529)
Q Consensus       338 ~~i~~~~~---------p~~~g~p~~~~iaala~al~~~~~~~--------------~~~~~~~i~~~a~~l~~~L~~~-  393 (529)
                      +.+.....         ....|+++...++++..|++.+...+              +++..++..+.++++.+.|++. 
T Consensus       235 ~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~  314 (397)
T TIGR01976       235 MNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLP  314 (397)
T ss_pred             hhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            54432211         12257888888888888887654332              3455666677788888888875 


Q ss_pred             CcEEecC---CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCC--------CCCCCCCCCCeEEEccCCCccCCCC
Q 009673          394 GYKLVSG---GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSV--------PGDKSALVPGGIRIGSPAMTTRGFS  462 (529)
Q Consensus       394 G~~v~~~---gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~--------Pg~~~~~~~~~iRig~~~~tt~g~~  462 (529)
                      +++++.+   ....+++.+.+.  +.+..++.+.|+++||.++.+..        |+.  +...+.||||++.++|    
T Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~--~~~~~~iRis~~~~~t----  386 (397)
T TIGR01976       315 GVTLYGVARLAARVPTVSFTVH--GLPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGL--NDEGGVVRVGLAHYNT----  386 (397)
T ss_pred             CEEEeCCCCccCCCceEEEEeC--CcCHHHHHHHHHHCCeEEEeCccchHHHHHHhCC--CCCCCeEEEEeeccCC----
Confidence            4888754   123344444443  45667888999999999975421        111  1124689999987765    


Q ss_pred             HHHHHHHHHHH
Q 009673          463 EKEFVAIADFI  473 (529)
Q Consensus       463 ~~d~~~la~~i  473 (529)
                      ++|++++++.|
T Consensus       387 ~~di~~l~~~l  397 (397)
T TIGR01976       387 AEEVDRLLEAL  397 (397)
T ss_pred             HHHHHHHHHhC
Confidence            89999998764

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>PLN00175 aminotransferase family protein; Provisional

Probab=99.96  E-value=3.6e-26  Score=241.30  Aligned_cols=359  Identities=13%  Similarity=0.089  Sum_probs=240.6

Q ss_pred             hhhcccCChHHHHHHHHHHHHhhcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 009673           80 DYSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA  157 (529)
Q Consensus        80 ~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~l  157 (529)
                      .+++....++.+..+..... ..+.|+|..++.  .+++.+.+++...+.+.. ..|+.      .....++++...+++
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~Lr~aia~~~  104 (413)
T PLN00175         33 AKRLEKFKTTIFTQMSSLAI-KHGAINLGQGFPNFDGPDFVKEAAIQAIRDGK-NQYAR------GFGVPELNSAIAERF  104 (413)
T ss_pred             hHHhhcCCCCHHHHHHHHhh-cCCeEecCCCCCCCCCCHHHHHHHHHHHhcCC-CCcCC------CCCCHHHHHHHHHHH
Confidence            45566667766655444322 336788877664  357888999887765421 12322      222346666667888


Q ss_pred             HHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCC
Q 009673          158 LAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG  236 (529)
Q Consensus       158 a~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~  236 (529)
                      .+.+|.+.+.- .+|.+|+|+ +|+..++.++++|||+|++++|.|..+.        ..+...|.  +++.++++++++
T Consensus       105 ~~~~g~~~~~~-~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~--------~~~~~~g~--~~~~v~~~~~~~  173 (413)
T PLN00175        105 KKDTGLVVDPE-KEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYE--------ATLSMAGA--KIKTVTLRPPDF  173 (413)
T ss_pred             HHHhCCCCCCC-CCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHH--------HHHHHcCC--EEEEEECCcccC
Confidence            88888653210 146668887 8999999999999999999998775442        13344565  666777765568


Q ss_pred             CCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCC--CCC---ccc
Q 009673          237 LVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK---YCD  306 (529)
Q Consensus       237 ~iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~~---~aD  306 (529)
                      .+|+++|++.+.+ ++|+|++++|+||+  ..   ++++|.++|++||++||+|+++ ..+.+.+...+  .+.   ...
T Consensus       174 ~~~~~~l~~~~~~-~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y-~~l~~~~~~~s~~~~~~~~~~v  251 (413)
T PLN00175        174 AVPEDELKAAFTS-KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVY-DKLAFEGDHISMASLPGMYERT  251 (413)
T ss_pred             CCCHHHHHHhcCc-CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEeccc-CccccCCcccChhhCCCCcCcE
Confidence            9999999999987 89999999999997  33   5788999999999999999984 44444332111  111   123


Q ss_pred             EEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673          307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR  384 (529)
Q Consensus       307 iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~  384 (529)
                      |+++|++|++  +|+|.||+++++      ++.+.+.........+.+...+.++ +.+|+.. ...+++.++++.++++
T Consensus       252 i~i~SfSK~~~~~G~RiG~~v~~~------~l~~~l~~~~~~~~~~~s~~~Q~a~-~~~l~~~-~~~~~~~~~~~~~~~~  323 (413)
T PLN00175        252 VTMNSLGKTFSLTGWKIGWAIAPP------HLTWGVRQAHSFLTFATATPMQWAA-VAALRAP-ESYYEELKRDYSAKKD  323 (413)
T ss_pred             EEEecchhhccCcchheeeeEeCH------HHHHHHHHHHhhccCCCCHHHHHHH-HHHHhCC-HHHHHHHHHHHHHHHH
Confidence            7889999986  789999999987      6666665432211233334434433 3455421 1234777888999999


Q ss_pred             HHHHHHHhcCcEEecCCCCCceEEEccCCCCC-cHHHHH-HhHhcCCeEEcCCCCCCCCC----CCCCCeEEEccCCCcc
Q 009673          385 ALASRLVELGYKLVSGGSDNHLVLVDLRPMGI-DGARVE-KILDMASITLNKNSVPGDKS----ALVPGGIRIGSPAMTT  458 (529)
Q Consensus       385 ~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i-~~~~~~-~~L~~~GI~v~~~~~Pg~~~----~~~~~~iRig~~~~tt  458 (529)
                      .+.+.|++.|+.+..+ ..++++|+++.+.++ +..++. .+++++||.+.    ||...    ....++|||++.    
T Consensus       324 ~l~~~L~~~g~~~~~p-~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~----pg~~F~~~~~~~~~~iRls~~----  394 (413)
T PLN00175        324 ILVEGLKEVGFKVYPS-SGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAI----PPSVFYLNPEDGKNLVRFAFC----  394 (413)
T ss_pred             HHHHHHHHCCCeecCC-CeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEe----CchHhCCCCCCCCCEEEEEEc----
Confidence            9999999988887654 235677888754444 344554 45578899994    44321    123468999964    


Q ss_pred             CCCCHHHHHHHHHHHHHHHH
Q 009673          459 RGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       459 ~g~~~~d~~~la~~i~~~~~  478 (529)
                        ..++++++.++.|.+.++
T Consensus       395 --~~~e~l~~~~~rL~~~~~  412 (413)
T PLN00175        395 --KDEETLRAAVERMKTKLK  412 (413)
T ss_pred             --CCHHHHHHHHHHHHHHHh
Confidence              247899999998887764

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.95  E-value=2.2e-26  Score=239.84  Aligned_cols=335  Identities=19%  Similarity=0.172  Sum_probs=232.9

Q ss_pred             cCCCCCcHHHHHHHhhhhhccCCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCC-hHHHHHHHH
Q 009673          109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRY-YGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLS-GSPANFEVY  185 (529)
Q Consensus       109 asen~~~~~V~eal~~~l~~~y~~G~p~~r~-~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~s-Gs~A~~~~l  185 (529)
                      .+..++|+.+.+++...+...+  ++|.... ..+..+.+.+ ..+++++++++|++ ++    +|..++ +++++..++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~la~~~~~~~~~----~v~~~~g~t~a~~~~~   78 (373)
T cd06453           6 AATSQKPQPVIDAIVDYYRHYN--ANVHRGVHELSARATDAY-EAAREKVARFINAPSPD----EIIFTRNTTEAINLVA   78 (373)
T ss_pred             ccccCCCHHHHHHHHHHHHhcC--CCCCCCccHHHHHHHHHH-HHHHHHHHHHhCCCCCC----eEEEeCCHHHHHHHHH
Confidence            4567889999999988875443  2332211 1122333333 34668899999998 43    344444 458999899


Q ss_pred             HhhcC---CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673          186 TAILK---PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY  262 (529)
Q Consensus       186 ~all~---pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~  262 (529)
                      .++..   |||+|++.+++|.+++....    ...+..|.  +++.++++ +++.+|++++++.+.+ ++++|++.+++|
T Consensus        79 ~~l~~~~~~g~~vl~~~~~~~~~~~~~~----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~~  150 (373)
T cd06453          79 YGLGRANKPGDEIVTSVMEHHSNIVPWQ----QLAERTGA--KLKVVPVD-DDGQLDLEALEKLLTE-RTKLVAVTHVSN  150 (373)
T ss_pred             HHhhhcCCCCCEEEECcchhHHHHHHHH----HHHhhcCc--EEEEeecC-CCCCcCHHHHHHHhcC-CceEEEEeCccc
Confidence            99877   99999999988876432111    01123454  55555565 5678999999999987 899999988777


Q ss_pred             CC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhh
Q 009673          263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAI  340 (529)
Q Consensus       263 p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i  340 (529)
                      ++  ..|+++|.++|+++|++|++|++|+.|....+...   .++|++++|+||++.+++.|++++++      ++.+.+
T Consensus       151 ~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~---~~~d~~~~s~~K~~~~~g~g~~~~~~------~~~~~~  221 (373)
T cd06453         151 VLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQD---LGCDFLAFSGHKMLGPTGIGVLYGKE------ELLEEM  221 (373)
T ss_pred             ccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeeccc---cCCCEEEeccccccCCCCcEEEEEch------HHhhcC
Confidence            65  77999999999999999999999887765322111   16899999999999776669999987      444444


Q ss_pred             ccccc--------------------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEec
Q 009673          341 NNAVF--------------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS  399 (529)
Q Consensus       341 ~~~~~--------------------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~  399 (529)
                      .....                    ....|+|+...+.++..+++.+...++++..++..++++++.+.|++. |++++.
T Consensus       222 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  301 (373)
T cd06453         222 PPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYG  301 (373)
T ss_pred             CCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC
Confidence            32110                    011357777788888888887776677888888889999999999885 788774


Q ss_pred             CC-CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC---CCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673          400 GG-SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI  473 (529)
Q Consensus       400 ~g-t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~---~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i  473 (529)
                      +. ...+++.+.+.  +++..++.+.|.++||.+..+......   ....++.||++++.++|    ++|++++++.|
T Consensus       302 ~~~~~~~~~~~~~~--~~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t----~~di~~~~~~l  373 (373)
T cd06453         302 DAEDRAGVVSFNLE--GIHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNT----EEEIDALVEAL  373 (373)
T ss_pred             CccccCCeEEEEEC--CcCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCC----HHHHHHHHhhC
Confidence            31 23445555543  456778888998999998643211000   01125689999887655    79999998864

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.95  E-value=5.3e-26  Score=237.16  Aligned_cols=335  Identities=19%  Similarity=0.222  Sum_probs=229.8

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecC-ChHHHHHHHHHhhcC
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYTAILK  190 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~-r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~-sGs~A~~~~l~all~  190 (529)
                      ++|+.|++++...+.+...  .++. .|..+....+.++ .+++++++++|++..+   +|.++ ++++++..++.++++
T Consensus        11 ~~p~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~la~~~~~~~~~---~v~~~~g~t~al~~~~~~~~~   84 (376)
T TIGR01977        11 PKPDEVYEAMADFYKNYGG--SPGRGRYRLALRASREVE-ETRQLLAKLFNAPSSA---HVVFTNNATTALNIALKGLLK   84 (376)
T ss_pred             CCCHHHHHHHHHHHHhcCC--CCCcccchHHHHHHHHHH-HHHHHHHHHhCcCCCC---eEEEeCCHHHHHHHHHHhccC
Confidence            4678999999877653211  1111 1111111122222 4558899999987531   34445 455899999999999


Q ss_pred             CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCH
Q 009673          191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDY  268 (529)
Q Consensus       191 pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~  268 (529)
                      +||+|++.+++|+++.....    ......|.  +++.++++ +++.+|++++++.+++ ++++|++++++|++  ..|+
T Consensus        85 ~gd~vl~~~~~~~~~~~~~~----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~~~-~~~~v~~~~~~n~tG~~~~~  156 (376)
T TIGR01977        85 EGDHVITTPMEHNSVARPLE----CLKEQIGV--EITIVKCD-NEGLISPERIKRAIKT-NTKLIVVSHASNVTGTILPI  156 (376)
T ss_pred             CCCEEEECcchhhHHHHHHH----HHHHHcCc--EEEEEecC-CCCCcCHHHHHHhcCC-CCeEEEEECCCCCccccCCH
Confidence            99999999887765431110    01112243  66666665 4578999999999977 89999998877775  7899


Q ss_pred             HHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcc-----
Q 009673          269 PRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN-----  342 (529)
Q Consensus       269 ~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~-----  342 (529)
                      ++|.++|+++|+++++|++|+.|....+...   .++|++++|+|||+.||.| |+++.+++.     ....+..     
T Consensus       157 ~~i~~l~~~~~~~livD~a~~~g~~~~~~~~---~~~D~~~~s~~K~l~~p~g~g~l~~~~~~-----~~~~~~~~~~~~  228 (376)
T TIGR01977       157 EEIGELAQENGIFFILDAAQTAGVIPIDMTE---LAIDMLAFTGHKGLLGPQGTGGLYIREGI-----KLKPLKSGGTGS  228 (376)
T ss_pred             HHHHHHHHHcCCEEEEEhhhccCccCCCchh---cCCCEEEecccccccCCCCceEEEEcCCc-----CcCceecCCCcc
Confidence            9999999999999999999998876543322   2689999999999999998 877776642     1010000     


Q ss_pred             ----------cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCC-C--CCceEE
Q 009673          343 ----------AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGG-S--DNHLVL  408 (529)
Q Consensus       343 ----------~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~g-t--~~~~~~  408 (529)
                                ....+..|+++...++++..+++.+...+.+...++..++++.+.+.|.+ .|++++.+. .  ....+.
T Consensus       229 ~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~  308 (376)
T TIGR01977       229 HSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVS  308 (376)
T ss_pred             ccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEE
Confidence                      00012246788888999998998887777788888999999999999986 678877531 1  123333


Q ss_pred             EccCCCCCcHHHHHHhHhcC-CeEEcCCCCCCC-----CCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          409 VDLRPMGIDGARVEKILDMA-SITLNKNSVPGD-----KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       409 v~~~~~~i~~~~~~~~L~~~-GI~v~~~~~Pg~-----~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      +.+  .++++.++.+.|.+. ||.+..+..-..     .+....+.|||+++.++    +++|++++++.|++
T Consensus       309 ~~~--~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~----t~~dv~~~~~~l~~  375 (376)
T TIGR01977       309 FTV--EGIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFN----TEEEIEKLLEALSE  375 (376)
T ss_pred             EEE--CCCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCC----CHHHHHHHHHHHhh
Confidence            444  356788898888776 999975421000     01223578999987665    48999999999875

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>PRK02948 cysteine desulfurase; Provisional

Probab=99.95  E-value=4.1e-26  Score=238.63  Aligned_cols=340  Identities=14%  Similarity=0.144  Sum_probs=233.8

Q ss_pred             cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-HHHHHHHHHh
Q 009673          109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTA  187 (529)
Q Consensus       109 asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s~A~~~~l~a  187 (529)
                      ++..++|+.|++++...+...+  +.++..+..+..+.+.++ .+++.+++++|++++    +|.+++| ++++..++.+
T Consensus         7 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~----~i~~~~g~t~a~~~~~~~   79 (381)
T PRK02948          7 AATTPMSKEALQTYQKAASQYF--GNESSLHDIGGTASSLLQ-VCRKTFAEMIGGEEQ----GIYFTSGGTESNYLAIQS   79 (381)
T ss_pred             CCCCCCCHHHHHHHHHHHHhcC--CCCccccHHHHHHHHHHH-HHHHHHHHHhCCCCC----eEEEeCcHHHHHHHHHHH
Confidence            4556889999999987775433  233333334434334444 577899999999875    3455666 5998888877


Q ss_pred             hc----CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 009673          188 IL----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP  263 (529)
Q Consensus       188 ll----~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p  263 (529)
                      ++    ++||+|++.+.+|.+.....     ..+...|.  ++..++++ +++.+|+++|++.+++ ++++|++++++|+
T Consensus        80 ~~~~~~~~g~~vv~~~~~h~s~~~~~-----~~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~n~  150 (381)
T PRK02948         80 LLNALPQNKKHIITTPMEHASIHSYF-----QSLESQGY--TVTEIPVD-KSGLIRLVDLERAITP-DTVLASIQHANSE  150 (381)
T ss_pred             HHHhccCCCCEEEECCcccHHHHHHH-----HHHHhCCC--EEEEEeeC-CCCCCCHHHHHHhcCC-CCEEEEEECCcCC
Confidence            75    67999999887776543211     11223454  55566665 4578999999999977 7899999888877


Q ss_pred             C--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh
Q 009673          264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI  340 (529)
Q Consensus       264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i  340 (529)
                      +  ..|+++|.++|+++|+++++|++|..|....+....   ++|++++|+||++ ||.| |+++.+++.    .+ ..+
T Consensus       151 tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~---~~d~~~~s~~K~~-gp~G~G~l~~~~~~----~~-~~~  221 (381)
T PRK02948        151 IGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEM---GIDSLSVSAHKIY-GPKGVGAVYINPQV----RW-KPV  221 (381)
T ss_pred             cEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcccC---CCCEEEecHHhcC-CCCcEEEEEEcCCC----CC-CCc
Confidence            6  789999999999999999999998887543332211   5899999999975 7887 999988741    01 111


Q ss_pred             cc---cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc-e-EEEccCCCC
Q 009673          341 NN---AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH-L-VLVDLRPMG  415 (529)
Q Consensus       341 ~~---~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~-~-~~v~~~~~~  415 (529)
                      ..   .......++++...++++..+++... .+.++..+++.++++++.+.|++.|+++...+..++ + .++.+...+
T Consensus       222 ~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~~  300 (381)
T PRK02948        222 FPGTTHEKGFRPGTVNVPGIAAFLTAAENIL-KNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIKG  300 (381)
T ss_pred             ccCCCCCCCcCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeCC
Confidence            00   00112356788888888888888754 356777889999999999999988876654321122 1 122222234


Q ss_pred             CcHHHHHHhHhcCCeEEcCCCC-------CC-------CCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          416 IDGARVEKILDMASITLNKNSV-------PG-------DKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       416 i~~~~~~~~L~~~GI~v~~~~~-------Pg-------~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ++++++...|+++||.++.+..       |.       ...+...+.|||++..++|    ++|++++++.|+++++
T Consensus       301 ~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t----~~di~~l~~~l~~~~~  373 (381)
T PRK02948        301 IEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTT----KDQIDTTIHALETIGN  373 (381)
T ss_pred             CCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCC----HHHHHHHHHHHHHHHH
Confidence            5677777788899999975431       10       0001124689999887654    8999999999998765

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.95  E-value=9e-26  Score=235.90  Aligned_cols=341  Identities=18%  Similarity=0.220  Sum_probs=234.3

Q ss_pred             cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh
Q 009673          109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI  188 (529)
Q Consensus       109 asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al  188 (529)
                      ++..++|+.|++++...+.+.  .|+|+..+..+..+.+.++ .+++++++++|+++++   .+...+|++++..++.++
T Consensus         6 aa~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~---i~~t~~~t~a~~~al~~~   79 (379)
T TIGR03402         6 NATTRVDPEVLEAMLPYFTEY--FGNPSSMHSFGGEVGKAVE-EAREQVAKLLGAEPDE---IIFTSGGTESDNTAIKSA   79 (379)
T ss_pred             cCCCCCCHHHHHHHHHHHHhc--CCCCCcccHHHHHHHHHHH-HHHHHHHHHhCCCCCe---EEEeCcHHHHHHHHHHHH
Confidence            455688999999999887643  3555532222233444444 5679999999998653   233345669988888776


Q ss_pred             c---CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-
Q 009673          189 L---KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-  264 (529)
Q Consensus       189 l---~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-  264 (529)
                      +   .+||+|++...+|.+......     .+...|.  +++.++++ +++.+|++++++.+++ +++++++.+++|++ 
T Consensus        80 ~~~~~~~~~vv~~~~~~~s~~~~~~-----~~~~~G~--~v~~v~~~-~~g~~~~~~l~~~i~~-~~~lv~i~~~~n~tG  150 (379)
T TIGR03402        80 LAAQPEKRHIITTAVEHPAVLSLCQ-----HLEKQGY--KVTYLPVD-EEGRLDLEELRAAITD-DTALVSVMWANNETG  150 (379)
T ss_pred             HHhcCCCCeEEEcccccHHHHHHHH-----HHHHcCC--EEEEEccC-CCCcCCHHHHHHhcCC-CcEEEEEEcccCCee
Confidence            3   467899988887765432221     1122354  55566665 4578999999999987 89999888776665 


Q ss_pred             -CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhc-
Q 009673          265 -DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN-  341 (529)
Q Consensus       265 -~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~-  341 (529)
                       ..|+++|.++|+++|+++++|++|+.|....+....   ++|++++|+|| +.||.| |+++.+++.    .+...+. 
T Consensus       151 ~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~---~~D~~~~s~~K-~~gp~G~g~l~v~~~~----~~~p~~~g  222 (379)
T TIGR03402       151 TIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEM---NIDMLSLSGHK-LHGPKGVGALYIRKGT----RFRPLLRG  222 (379)
T ss_pred             ecccHHHHHHHHHHcCCEEEEECcccccccccCcccC---CCCEEEEcHHH-cCCCCceEEEEECCCC----CCCCcccC
Confidence             789999999999999999999999887654332221   68999999999 678998 999998742    1111010 


Q ss_pred             -ccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cCcEEecCCCC--CceEEEccCCCCC
Q 009673          342 -NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGGSD--NHLVLVDLRPMGI  416 (529)
Q Consensus       342 -~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G~~v~~~gt~--~~~~~v~~~~~~i  416 (529)
                       ........|+++...+.++..+++... .++++..++..++++.+.+.|.+  .++.+..+...  .+.+.+.+  .+.
T Consensus       223 ~~~~~~~~~gt~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  299 (379)
T TIGR03402       223 GHQERGRRAGTENVPGIVGLGKAAELAT-EHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISF--EYI  299 (379)
T ss_pred             CccCCCcCCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEe--cCC
Confidence             000012257889999999998988765 35566677888888889998874  47777653211  12232223  245


Q ss_pred             cHHHHHHhHhcCCeEEcCCCC--CCCCC------------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          417 DGARVEKILDMASITLNKNSV--PGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       417 ~~~~~~~~L~~~GI~v~~~~~--Pg~~~------------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +++++...|+++||.+..+..  ++...            ...++.||+|++.+||    ++|++++++.|++++..
T Consensus       300 ~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t----~~di~~~~~~l~~~~~~  372 (379)
T TIGR03402       300 EGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNT----EEDIDYVLEVLPPIIAR  372 (379)
T ss_pred             CHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCC----HHHHHHHHHHHHHHHHH
Confidence            678888899999999975421  11000            1124789999988876    79999999999987764

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=99.95  E-value=1.4e-25  Score=235.52  Aligned_cols=333  Identities=19%  Similarity=0.217  Sum_probs=226.1

Q ss_pred             cceeEecCCC---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673          103 KSLELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS  178 (529)
Q Consensus       103 ~~i~L~asen---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs  178 (529)
                      +.|++..++-   ..+|++++++...+. +|..||++.|+..|. +...++|    +.+++++|.+.     .+.+++|+
T Consensus        39 ~~i~~~~~~~lg~~~~~~v~~~~~~~~~-~~~~~~~~s~~~~G~~~~~~~le----~~ia~~~g~~~-----~ii~~~~~  108 (393)
T TIGR01822        39 EVLNFCANNYLGLSSHPDLIQAAKDALD-EHGFGMSSVRFICGTQDIHKELE----AKIAAFLGTED-----TILYASCF  108 (393)
T ss_pred             eEEEeeCCCccccCCCHHHHHHHHHHHH-HhCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCc-----EEEECchH
Confidence            4577665541   247899999988775 344578888887774 4445555    77889999864     24457888


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCc
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPK  253 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-----~pk  253 (529)
                      +|+..++.++++|||+|++.++.|.+...        .+...+.  ..+.+      ..+|++++++.+++.     +++
T Consensus       109 ~a~~~~~~~l~~~gd~vi~~~~~~~s~~~--------~~~~~~~--~~~~~------~~~d~~~l~~~i~~~~~~~~~~~  172 (393)
T TIGR01822       109 DANGGLFETLLGAEDAIISDALNHASIID--------GVRLCKA--KRYRY------ANNDMADLEAQLKEARAAGARHR  172 (393)
T ss_pred             HHHHHHHHHhCCCCCEEEEeccccHHHHH--------HHHhcCC--ceEEe------CCCCHHHHHHHHHhhhhcCCCce
Confidence            99999999999999999999988765432        2223332  22222      247899999988752     577


Q ss_pred             EEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccccccccc----CCCC-CcccEEEecccccccCCCCeEEEe
Q 009673          254 LIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV----ADPF-KYCDVVTTTTHKSLRGPRGGMIFF  326 (529)
Q Consensus       254 lIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~----~~~~-~~aDiv~~S~hK~l~GprgG~i~~  326 (529)
                      +|+++...+++  ..|+++|+++|++||++|++|++|..|.......    ...+ ..+|++++|+||+++|+|+||+++
T Consensus       173 ~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r~G~~~~  252 (393)
T TIGR01822       173 LIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGASGGFTTA  252 (393)
T ss_pred             EEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCCcEEEEe
Confidence            88877554443  6899999999999999999999997776532110    0111 257899999999999999999999


Q ss_pred             eCCCcchhHHHhhhcccccCC-CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc
Q 009673          327 KKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH  405 (529)
Q Consensus       327 ~~~~~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~  405 (529)
                      ++      ++.+.+.....+. ..++++...+++...+++...  +.++..+++.++++++.+.|++.|+.+..+  ...
T Consensus       253 ~~------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~  322 (393)
T TIGR01822       253 RK------EVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLE--ASNELRDRLWANTRYFRERMEAAGFDIKPA--DHP  322 (393)
T ss_pred             CH------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCCCCC--CCC
Confidence            87      6666665422222 233444444555555666542  345677888999999999998888876532  223


Q ss_pred             eEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          406 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       406 ~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ++.+.+.. ..+..++.+.|.+.||.+.....|.  .+.....+||+++..    .+++|++++++.|.++.+
T Consensus       323 ~~~i~~~~-~~~~~~l~~~L~~~gI~v~~~~~~~--~~~~~~~iRis~~~~----~t~edi~~~~~~l~~~~~  388 (393)
T TIGR01822       323 IIPVMLYD-AVLAQRFARRLLEEGIYVTGFFYPV--VPKGQARIRVQISAA----HTEEQLDRAVEAFTRIGR  388 (393)
T ss_pred             EEEEEeCC-HHHHHHHHHHHHHCCeeEeeeCCCC--CCCCCceEEEEECCC----CCHHHHHHHHHHHHHHHH
Confidence            33333221 1245667777777899986322221  111235699987654    458999999999988765

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.95  E-value=7.8e-26  Score=235.72  Aligned_cols=332  Identities=21%  Similarity=0.235  Sum_probs=230.5

Q ss_pred             cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC-CCCceeeecCChHHHHHHHHHh
Q 009673          109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSGSPANFEVYTA  187 (529)
Q Consensus       109 asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~-~~~~~~V~~~sGs~A~~~~l~a  187 (529)
                      ++..++|+.|++++...+.+.+..+..+. +..+.++.+.++ .+++.+++++|+++ ++   .+...+++.++..++.+
T Consensus         6 ~~~~~~p~~v~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~r~~la~~lg~~~~~~---v~~~~~~t~a~~~~~~~   80 (371)
T PF00266_consen    6 AGTGPMPKSVLEAISDYLRNFYANPHSGV-SHRSREFAEILE-EAREALAKLLGAPPDEE---VVFTSNGTEALNAVASS   80 (371)
T ss_dssp             SSS-B-BHHHHHHHHHHHHHSGSSTSTSS-STTSHHHHHHHH-HHHHHHHHHHTSSTTEE---EEEESSHHHHHHHHHHH
T ss_pred             CCccCCCHHHHHHHHHHHHHhhhcCcccc-cchhhhhhHHHH-HHHHHHHHhcCCccccc---cccccccchhhhhhhhc
Confidence            56678999999999988876664432222 223344445554 67899999999998 42   23445666899999999


Q ss_pred             h---cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC--CC
Q 009673          188 I---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS--AY  262 (529)
Q Consensus       188 l---l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s--~~  262 (529)
                      +   +++||+|++.+.+|.+......    ......|.  ++..++.+ .++.+|++++++.+++ ++++|++...  ..
T Consensus        81 l~~~~~~g~~vl~~~~~~~s~~~~~~----~~~~~~g~--~v~~i~~~-~~~~~~~~~~~~~l~~-~~~lv~~~~~~~~t  152 (371)
T PF00266_consen   81 LLNPLKPGDEVLVTSNEHPSNRYPWE----EIAKRKGA--EVRVIPAD-PGGSLDLEDLEEALNP-DTRLVSISHVENST  152 (371)
T ss_dssp             HHHHGTTTCEEEEEESSHHHHHHHHH----HHHHHTTE--EEEEEEEG-TTSSCSHHHHHHHHHT-TESEEEEESBETTT
T ss_pred             cccccccccccccccccccccccccc----cccccchh--hhcccccc-ccchhhhhhhhhhhcc-ccceEEeecccccc
Confidence            8   8999999999987766532111    01123354  44455554 4578999999999986 9999988754  34


Q ss_pred             CCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhc
Q 009673          263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN  341 (529)
Q Consensus       263 p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~  341 (529)
                      +...|+++|.++|+++|+++++|++|+.|.+..+....   ++|++++|.|| |.||+| |++++++      +..++++
T Consensus       153 G~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~---~~D~~~~s~~K-l~gp~G~g~l~v~~------~~~~~~~  222 (371)
T PF00266_consen  153 GVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDEL---GADFLVFSSHK-LGGPPGLGFLYVRP------EAIERLR  222 (371)
T ss_dssp             TBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTT---TESEEEEESTS-TTSSSTEEEEEEEH------HHHHHHH
T ss_pred             cEEeeeceehhhhhccCCceeEechhcccccccccccc---ccceeeecccc-cCCCCchhhheehh------hhhhccc
Confidence            45889999999999999999999999998775443222   68999999999 999999 9999998      3333332


Q ss_pred             cc--------------------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecC
Q 009673          342 NA--------------------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG  400 (529)
Q Consensus       342 ~~--------------------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~  400 (529)
                      ..                    ......|+++...+.++..+++.+...+.++..++..+.++++.+.|.+. ++.++.+
T Consensus       223 p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~  302 (371)
T PF00266_consen  223 PAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGP  302 (371)
T ss_dssp             TSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSS
T ss_pred             cccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeee
Confidence            11                    11123578999999999999998866667888899999999999999885 4555442


Q ss_pred             ---CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCC---CCCCCCCCeEEEccCCCccCCCCHHHHHHH
Q 009673          401 ---GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPG---DKSALVPGGIRIGSPAMTTRGFSEKEFVAI  469 (529)
Q Consensus       401 ---gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg---~~~~~~~~~iRig~~~~tt~g~~~~d~~~l  469 (529)
                         ...+.++.+.+  .+.+++.+.+.|++.||.+..+..-.   .......++||+|++.++|    ++|++++
T Consensus       303 ~~~~~~~~i~~~~~--~~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt----~~dv~~l  371 (371)
T PF00266_consen  303 DDEPRRPSIVSFNL--PGSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNT----EEDVDRL  371 (371)
T ss_dssp             SCGGBGTTEEEEEE--TTSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSS----HHHHHHH
T ss_pred             cccccccceEEEee--cCCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCC----HHHHhhC
Confidence               11223444444  45678899999988899996531000   0000013799999888876    7999875

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.95  E-value=3e-25  Score=232.20  Aligned_cols=340  Identities=17%  Similarity=0.211  Sum_probs=232.6

Q ss_pred             cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC-CCCCCceeeecCChH-HHHHHHHH
Q 009673          109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGS-PANFEVYT  186 (529)
Q Consensus       109 asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~-~~~~~~~~V~~~sGs-~A~~~~l~  186 (529)
                      ++..++++.|++++...+.+.|.  .|+..+..+....+.+++ +++.+.+.+|. +++    +|.+++|+ +++..++.
T Consensus         6 aa~~~~~~~v~~~~~~~~~~~~~--n~~~~~~~~~~~~~~l~~-a~~~~~~~~~~~~~~----~i~~t~g~teal~~~~~   78 (382)
T TIGR03403         6 NATTMLDPKVKELMDPFFCDIYG--NPNSLHQFGTATHPAIAE-ALDKLYKGINARDLD----DIIITSCATESNNWVLK   78 (382)
T ss_pred             cCCCCCCHHHHHHHHHHHHhcCc--CCccccHHHHHHHHHHHH-HHHHHHHHcCcCCCC----eEEEeCCHHHHHHHHHH
Confidence            34567889999999988876553  344333333444556664 44566667776 443    45556665 89888888


Q ss_pred             hhc-----CC-CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 009673          187 AIL-----KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS  260 (529)
Q Consensus       187 all-----~p-GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s  260 (529)
                      ++.     ++ ||+|++...+|+++.....     .+...|.  +++.++++ +++.+|++++++.+++ ++++++++++
T Consensus        79 ~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~-----~~~~~G~--~v~~v~~~-~~g~~d~~~l~~~i~~-~t~lv~~~~~  149 (382)
T TIGR03403        79 GVYFDEILKGGKNHIITTEVEHPAVRATCA-----FLESLGV--EVTYLPIN-EQGTITAEQVREAITE-KTALVSVMWA  149 (382)
T ss_pred             HHHHhhcccCCCCEEEEcCCccHHHHHHHH-----HHHHCCC--EEEEEecC-CCCCCCHHHHHHhccc-CCeEEEEEcc
Confidence            762     56 4789999888766542211     1223344  66666666 4578999999999987 7899989888


Q ss_pred             CCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHH
Q 009673          261 AYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE  337 (529)
Q Consensus       261 ~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~  337 (529)
                      +||+  ..|+++|.++|+++|+++++|++|..|.+..+...   .++|++++|+||+ .||.| |+++++++.    .+.
T Consensus       150 ~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~---~~~D~~~~s~~K~-~gp~G~g~l~vr~~~----~~~  221 (382)
T TIGR03403       150 NNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQK---AGVDFLSFSAHKF-HGPKGVGGLYIRKGV----ELT  221 (382)
T ss_pred             cCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCccc---cCCCEEEEcchhh-CCCCceEEEEECCCC----CCC
Confidence            7776  78999999999999999999999887755332211   1689999999997 58888 999988742    111


Q ss_pred             hhhc--ccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCC--CCceEEEccC
Q 009673          338 SAIN--NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGS--DNHLVLVDLR  412 (529)
Q Consensus       338 ~~i~--~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt--~~~~~~v~~~  412 (529)
                      ..+.  ........|+++...+.+++.+++... +..+...+++...++++.+.|.+ .|+.++.+..  ..+++.+.+ 
T Consensus       222 p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-  299 (382)
T TIGR03403       222 PLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLAN-EYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISI-  299 (382)
T ss_pred             CcccCCCCCCCcccCCcChHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEe-
Confidence            1110  000111257788888988888887654 23566677888888899999987 5788876421  123444444 


Q ss_pred             CCCCcHHHHHHhHhcCCeEEcCCC-C-CCCC------------CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          413 PMGIDGARVEKILDMASITLNKNS-V-PGDK------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       413 ~~~i~~~~~~~~L~~~GI~v~~~~-~-Pg~~------------~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                       .++++..+...|.+.||.++.+. + ++..            .+...+.||+|++.++|    ++|++++++.|+++++
T Consensus       300 -~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t----~~did~~~~~l~~~~~  374 (382)
T TIGR03403       300 -KGVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTT----EEEIDYTIEVFKKAVQ  374 (382)
T ss_pred             -CCCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCC----HHHHHHHHHHHHHHHH
Confidence             35677788888999999998542 1 0000            01123679999988765    8999999999998876


Q ss_pred             H
Q 009673          479 I  479 (529)
Q Consensus       479 ~  479 (529)
                      .
T Consensus       375 ~  375 (382)
T TIGR03403       375 R  375 (382)
T ss_pred             H
Confidence            4

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]

Probab=99.95  E-value=6.6e-26  Score=226.32  Aligned_cols=299  Identities=19%  Similarity=0.161  Sum_probs=206.4

Q ss_pred             hhhcccCChHHHHHHHHHHHHhhccee-EecCCC--CCcHHHHHHHhhhhhc----cCCCCCCCCCCCCCchhHHHHHHH
Q 009673           80 DYSLGEADPEVCEIITKEKERQFKSLE-LIASEN--FTSRAVMEAVGSCLTN----KYSEGLPGKRYYGGNEYIDELETL  152 (529)
Q Consensus        80 ~~~l~~~d~~~~~~~~~e~~~~~~~i~-L~asen--~~~~~V~eal~~~l~~----~y~~G~p~~r~~~g~~~~d~lE~~  152 (529)
                      ++++....|.+|..+.+.... -...+ |..+..  ++|+-|.+++......    .|+.|      ||    +.++.+.
T Consensus         9 ~~~l~~~~~~vw~e~~~la~e-~~~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~------~G----~p~L~~a   77 (420)
T KOG0257|consen    9 NRNLSTSKPYVWTEINRLAAE-HKVPNPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRG------YG----LPQLRKA   77 (420)
T ss_pred             cccccccCCcHHHHHHHHHHh-cCCCCcccCCCCCCCCcHHHHHHHHHHhccchhcccccc------CC----chHHHHH
Confidence            456777888888877654332 23344 766652  4688888888766543    34322      33    2345555


Q ss_pred             HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673          153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL  231 (529)
Q Consensus       153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v  231 (529)
                      .++.+++++|.....- .+|.+|+|+ +++..++++++++||+|++.+|.+.+..        ..+.+.|.  .++.++.
T Consensus        78 L~k~~se~~~~~~~~~-~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~--------~~~~maG~--tpv~v~~  146 (420)
T KOG0257|consen   78 LAKAYSEFYGGLLDPD-DEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYI--------PQVVMAGG--TPVFVPL  146 (420)
T ss_pred             HHHHHHHHhccccCCc-ccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhh--------hHHhhcCC--cceeecc
Confidence            6688888888764321 368889999 9999999999999999999999765432        35567776  4555444


Q ss_pred             C-------CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccc-c
Q 009673          232 D-------ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-V  298 (529)
Q Consensus       232 ~-------~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~  298 (529)
                      .       ..+|.+|.++++.++++ |||+|++++|+||+     ...+++|++||++||+++|+|++ |.-+++.+. +
T Consensus       147 ~~~~g~~~s~~~~~D~~~le~~~t~-kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDev-Ye~~v~d~~~h  224 (420)
T KOG0257|consen  147 KPKEGNVSSSDWTLDPEELESKITE-KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEV-YEWLVYDGNKH  224 (420)
T ss_pred             ccccccccCccccCChHHHHhhccC-CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhH-hHHHhhCCCcc
Confidence            4       35689999999999999 99999999999997     34699999999999999999998 555666553 2


Q ss_pred             CCC--CCc---ccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccc--cCCCCCCChHHHHHHHHHHHHHhc-
Q 009673          299 ADP--FKY---CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQ-  368 (529)
Q Consensus       299 ~~~--~~~---aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~--~p~~~g~p~~~~iaala~al~~~~-  368 (529)
                      ...  +++   ..+.++|++|++  +|||.||+++++      .+........  +-....+|..   .|.+.|+.... 
T Consensus       225 ~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~------~L~~~~~~vh~~~~~~~~Tp~q---~A~a~a~~~~~~  295 (420)
T KOG0257|consen  225 IRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPK------HLYSALFPVHQNFVFTCPTPIQ---EASAAAFALELA  295 (420)
T ss_pred             eeeecCCchhheEEEeccccceeeeeeeeeeeeechH------HhhhhHHHHhhccccccCcHHH---HHHHHHHhhhhh
Confidence            221  122   347889999986  899999999965      4433322111  1111222222   22222332211 


Q ss_pred             --Cc---hH-HHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccC
Q 009673          369 --SP---EF-KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLR  412 (529)
Q Consensus       369 --~~---~~-~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~  412 (529)
                        ++   .+ .++.+.++++++.|.+.|.+.|+++..+ ..++++|+|+.
T Consensus       296 ~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~~p-~gayyl~adfs  344 (420)
T KOG0257|consen  296 CLQPGGSYFITELVKEYKEKRDILAKALEELGLKVTGP-EGAYYLWADFS  344 (420)
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCceEEEEecc
Confidence              11   34 4488999999999999999999998765 34677888987

>PRK08960 hypothetical protein; Provisional

Probab=99.95  E-value=5.9e-25  Score=230.41  Aligned_cols=339  Identities=13%  Similarity=0.100  Sum_probs=218.8

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.++|..+++.  +|+.+++++...+.+.. .+|+.      .....++++...+++.+.+|...+.  -+|.+|+|+ +
T Consensus        33 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~it~G~~~  103 (387)
T PRK08960         33 DVIHLEIGEPDFTTAEPIVAAGQAALAAGH-TRYTA------ARGLPALREAIAGFYAQRYGVDVDP--ERILVTPGGSG  103 (387)
T ss_pred             CeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CccCC------CCCCHHHHHHHHHHHHHHhCCCCCh--hhEEEccCcHH
Confidence            56888877753  68999999988775321 12321      1223456656667777766754322  256678887 9


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      |+..++.++++|||+|++++|+|.++..        .+...|.  +++.++++.+ ++.+|++++++.+++ ++++++++
T Consensus       104 al~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~  172 (387)
T PRK08960        104 ALLLASSLLVDPGKHWLLADPGYPCNRH--------FLRLVEG--AAQLVPVGPDSRYQLTPALVERHWNA-DTVGALVA  172 (387)
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHHhcCC--eEEEEecCcccCCCCCHHHHHHHhCc-cceEEEEE
Confidence            9999999999999999999998876532        2234454  5555566544 468999999998887 78888888


Q ss_pred             CCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCCC-ccc-EEEecccccc--cCCCCeEEEeeCC
Q 009673          259 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD-VVTTTTHKSL--RGPRGGMIFFKKD  329 (529)
Q Consensus       259 ~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aD-iv~~S~hK~l--~GprgG~i~~~~~  329 (529)
                      .|+||+  ..+   +++|+++|++||+++++|+++ .++.+.+.....+. ..+ ++++|+||.+  +|.|.||+++++ 
T Consensus       173 ~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y-~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~-  250 (387)
T PRK08960        173 SPANPTGTLLSRDELAALSQALRARGGHLVVDEIY-HGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAPP-  250 (387)
T ss_pred             CCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccc-cccccCCCCCChhhccCCEEEEeecccccCCcccEEEEEEcCH-
Confidence            899997  444   567777899999999999984 45544322111122 223 7889999986  789999999987 


Q ss_pred             CcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEE
Q 009673          330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV  409 (529)
Q Consensus       330 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v  409 (529)
                           ++.+.+.........+.+...+.++. .++........++..+.+.++++.+.+.|++.|+.+......+.++|+
T Consensus       251 -----~~~~~~~~~~~~~~~~~s~~~q~a~~-~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f~~~  324 (387)
T PRK08960        251 -----AAVPELEKLAQNLYISASTPAQHAAL-ACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAFYLYA  324 (387)
T ss_pred             -----HHHHHHHHHHhhhccCCCHHHHHHHH-HHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEEEEE
Confidence                 67666654332222233333334332 344321112335667778888999999998888765322223566788


Q ss_pred             ccCCCCCcHHHHHH-hHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          410 DLRPMGIDGARVEK-ILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       410 ~~~~~~i~~~~~~~-~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      ++.....+..++.+ +++++||.+.++...+.  ....++|||++..      ..+++++..+.|.+++
T Consensus       325 ~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~~~iRi~~~~------~~~~l~~al~~l~~~~  385 (387)
T PRK08960        325 DISAFGGDAFAFCRHFLETEHVAFTPGLDFGR--HQAGQHVRFAYTQ------SLPRLQEAVERIARGL  385 (387)
T ss_pred             eccccCCCHHHHHHHHHHhCCEEEcCchHhCC--CCCCCeEEEEecC------CHHHHHHHHHHHHHHH
Confidence            87543345566654 45789999954322111  1124689998642      2466666666655543

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=99.95  E-value=6.1e-25  Score=230.38  Aligned_cols=336  Identities=15%  Similarity=0.129  Sum_probs=220.9

Q ss_pred             hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCce-eeecCChH
Q 009673          102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGV-NVQPLSGS  178 (529)
Q Consensus       102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~-~V~~~sGs  178 (529)
                      .+.|+|..+++.  +++.+.+++...+......+|+.   ..|   ..++.+.+.+++.+.+|...+.  - +|.+|+|+
T Consensus        30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~lr~aia~~~~~~~g~~~~~--~~~I~it~Gs  101 (388)
T PRK07366         30 KELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLL---FHG---TLDFREAAAQWYEQRFGLAVDP--ETEVLPLIGS  101 (388)
T ss_pred             CCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCC---CCC---CHHHHHHHHHHHHHhhCCcCCC--cCeEEECCCc
Confidence            356888888863  57889999887664321122322   112   2356656667777777754321  2 47779998


Q ss_pred             -HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEE
Q 009673          179 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLII  256 (529)
Q Consensus       179 -~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi  256 (529)
                       +|+..++.++++|||+|++.+|.|.++..        .+...|.  ++++++++++ .+.+|++++++.+.. ++|+|+
T Consensus       102 ~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~  170 (388)
T PRK07366        102 QEGTAHLPLAVLNPGDFALLLDPGYPSHAG--------GVYLAGG--QIYPMPLRAENDFLPVFADIPTEVLA-QARLMV  170 (388)
T ss_pred             HHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEEECCCccCCCCCHHHHHHhhcc-cceEEE
Confidence             89999999999999999999998765431        2344565  6677777644 367899999888766 799999


Q ss_pred             EcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccccc--CCCC--C-ccc--EEEecccccc--cCCCCe
Q 009673          257 AGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPF--K-YCD--VVTTTTHKSL--RGPRGG  322 (529)
Q Consensus       257 ~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~--~-~aD--iv~~S~hK~l--~GprgG  322 (529)
                      +++|+||+  ..   .+++|.++|++||++||+|++ |..+.+.+..  ++..  . ..+  ++++|++|++  +|.|.|
T Consensus       171 l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~-Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG  249 (388)
T PRK07366        171 LSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFP-YVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIG  249 (388)
T ss_pred             EeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecc-hhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhhe
Confidence            99999997  33   466778899999999999998 4454443321  1111  1 112  6789999986  899999


Q ss_pred             EEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC
Q 009673          323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS  402 (529)
Q Consensus       323 ~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt  402 (529)
                      |+++++      ++.+++.....+...+++.....+++ .++.. ....+++.++.+.++++.+.+.|++.|+.+..+ .
T Consensus       250 ~~v~~~------~li~~l~~~~~~~~~~~~~~~~~~a~-~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p-~  320 (388)
T PRK07366        250 FAIGNA------QLIQALRQVKAVVDFNQYRGILNGAI-AALTG-PQATVQQTVQIFRQRRDAFINALHQIGWPVPLP-E  320 (388)
T ss_pred             ehcCCH------HHHHHHHHHHhhcccCCCHHHHHHHH-HHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-C
Confidence            999887      67776654432222222222222222 23431 112346778888899999999998888765443 2


Q ss_pred             CCceEEEccCCC-CCcHHHH-HHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          403 DNHLVLVDLRPM-GIDGARV-EKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       403 ~~~~~~v~~~~~-~i~~~~~-~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      .++++|+++... +.+..++ ..+++++||.+.    ||.. +...++++||++.      .+++++++..+.|.+.
T Consensus       321 ~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~----pg~~f~~~~~~~iRi~~~------~~~~~l~~~l~rl~~~  387 (388)
T PRK07366        321 ATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAAS----PGSGFGKSGEGYVRFALV------HDPDILEEAVERIAAF  387 (388)
T ss_pred             eeEEEEEECCcccCCCHHHHHHHHHHhCCEEEe----CchHhCcCCCCeEEEEec------CCHHHHHHHHHHHHHh
Confidence            356778887532 1234555 455588999994    4443 1223578999864      2367888888777653

>PRK07681 aspartate aminotransferase; Provisional

Probab=99.95  E-value=1.2e-24  Score=229.05  Aligned_cols=333  Identities=16%  Similarity=0.131  Sum_probs=221.8

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.++|..+++.  +++.+.+++...+.+....+|+.    .|   ..++.+.+.+++.+.+|.+.+. ..+|.+|+|+ +
T Consensus        33 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~~----~G---~~~lr~aia~~~~~~~g~~~~~-~~~I~it~G~~~  104 (399)
T PRK07681         33 KMIDLSIGNPDMPPADFVREEMVHTANQKESYGYTL----SG---IQEFHEAVTEYYNNTHNVILNA-DKEVLLLMGSQD  104 (399)
T ss_pred             CeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCCC----CC---cHHHHHHHHHHHHHHhCCCCCC-CCeEEECCCcHH
Confidence            56888877763  67888999887664321122321    12   2355555667777777764321 0257778998 8


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      ++..++.++++|||+|++++|.|.++..        .+...|.  ++++++++++ ++.+|++++++.+.+ ++|+|+++
T Consensus       105 al~~~~~~~~~~Gd~Vlv~~P~y~~~~~--------~~~~~G~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~v~l~  173 (399)
T PRK07681        105 GLVHLPMVYANPGDIILVPDPGYTAYET--------GIQMAGA--TSYYMPLKKENDFLPDLELIPEEIAD-KAKMMILN  173 (399)
T ss_pred             HHHHHHHHhCCCCCEEEECCCCccchHH--------HHHhcCC--EEEEEecCCCCCCcCCHHHHHHhccc-cceEEEEe
Confidence            9999999999999999999998765431        2344554  7777777654 368999999988876 89999999


Q ss_pred             CCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC---CC---cccEEEecccccc--cCCCCeEEE
Q 009673          259 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK---YCDVVTTTTHKSL--RGPRGGMIF  325 (529)
Q Consensus       259 ~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~~---~aDiv~~S~hK~l--~GprgG~i~  325 (529)
                      +|+||+  ..+   +++|.++|+++|++||+|+++ ..+.+.+....+   +.   ...|++.|+||.+  +|.|.||++
T Consensus       174 ~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i  252 (399)
T PRK07681        174 FPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAY-AEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMI  252 (399)
T ss_pred             CCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccc-hhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEe
Confidence            899997  444   778888999999999999995 444433321111   11   1247889999987  788999999


Q ss_pred             eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc
Q 009673          326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH  405 (529)
Q Consensus       326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~  405 (529)
                      +++      ++.+++.........+.+...+.++ ..++... ...+++..+.+.++++.+.+.|++.|+.+..+ ..+.
T Consensus       253 ~~~------~l~~~~~~~~~~~~~~~s~~~q~~~-~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p-~~g~  323 (399)
T PRK07681        253 GNE------EIVRALTQFKSNTDYGVFLPIQKAA-CAALRNG-AAFCEKNRGIYQERRDTLVDGFRTFGWNVDKP-AGSM  323 (399)
T ss_pred             cCH------HHHHHHHHHHhhcccCCCHHHHHHH-HHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-Ceee
Confidence            887      6777665432211122223333332 3344321 12335667778888899999999888876543 2356


Q ss_pred             eEEEccCCCCCcHHHHHHh-HhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          406 LVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       406 ~~~v~~~~~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      ++|+++. .+++..++... ++++||.+.    ||.. +...++++||++.      .+++++++.++.|++
T Consensus       324 f~~~~l~-~~~~~~~~~~~l~~~~gv~v~----pg~~f~~~~~~~iRis~~------~~~~~~~~~l~~l~~  384 (399)
T PRK07681        324 FVWAEIP-KGWTSLSFAYALMDRANVVVT----PGHAFGPHGEGFVRIALV------QDEEVLQQAVENIRN  384 (399)
T ss_pred             EEEEECC-CCCCHHHHHHHHHHhCCEEEe----CChhhCcCCCCeEEEEec------CCHHHHHHHHHHHHH
Confidence            7788875 34566665555 455999994    4433 2223578999864      246888888888876

>PRK12414 putative aminotransferase; Provisional

Probab=99.95  E-value=5.8e-25  Score=230.17  Aligned_cols=351  Identities=15%  Similarity=0.164  Sum_probs=227.4

Q ss_pred             cccCChHHHHHHHHHHHHhhcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673           83 LGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA  160 (529)
Q Consensus        83 l~~~d~~~~~~~~~e~~~~~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~  160 (529)
                      +....+.+...+... ..+.+.|+|..+++.  +++.+.+++...+.... ..|      +......++++.++++++++
T Consensus        11 ~~~~~~~~~~~~~~~-~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y------~~~~G~~~lr~~ia~~l~~~   82 (384)
T PRK12414         11 LPDVGTTIFTVIGQL-AAQHDALNLSQGAPNFAPDPALVEGVARAMRDGH-NQY------APMAGIAALREALAEKTERL   82 (384)
T ss_pred             cccCCccHHHHHHHH-HHhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhCC-CCc------CCCCCcHHHHHHHHHHHHHH
Confidence            333444455444332 234467889887753  47888888876654321 123      22222346666677889999


Q ss_pred             cCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCC
Q 009673          161 FNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD  239 (529)
Q Consensus       161 ~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD  239 (529)
                      +|++.+.. .+|.+++|+ +++..++.++++|||+|++++|.|.++.        ..+...|.  +++.++++.+++.+|
T Consensus        83 ~g~~~~~~-~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~d  151 (384)
T PRK12414         83 YGARYDPA-SEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYA--------PIVRLQGA--TPVAIKLSPEDFRVN  151 (384)
T ss_pred             hCCCCCCC-CcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchH--------HHHHHcCC--EEEEEecCccccccC
Confidence            99863210 135556666 8999999999999999999999875432        12334454  666777765567899


Q ss_pred             HHHHHHHhhhcCCcEEEEcCCCCCC--C---CCHHHHHHHHHHhCCEEEEecccccccccccccCCCC---C---cccEE
Q 009673          240 YDMLEKTAILFRPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K---YCDVV  308 (529)
Q Consensus       240 ~d~le~~i~~~~pklIi~~~s~~p~--~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~---~aDiv  308 (529)
                      ++++++.+++ ++|+|++++++||+  .   .++++|.++|++||+++|+|+++. .+.+.+....++   .   ...++
T Consensus       152 ~~~l~~~l~~-~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~i~  229 (384)
T PRK12414        152 WDEVAAAITP-RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYE-HVVFDGARHHSMARHRELAERSVI  229 (384)
T ss_pred             HHHHHhhcCc-ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhh-hccCCCCCccCcccCcCccCcEEE
Confidence            9999999976 89999999999997  2   368889999999999999999954 444333211122   1   12388


Q ss_pred             Eecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 009673          309 TTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL  386 (529)
Q Consensus       309 ~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l  386 (529)
                      +.|+||.+  +|.|.||+++++      ++.+.+.........+.+...+.+ +..+|+.  ...+.+..+.+.++++.+
T Consensus       230 ~~SfSK~~~~pGlRiG~~v~~~------~l~~~l~~~~~~~~~~~s~~~q~a-~~~~l~~--~~~~~~~~~~~~~~r~~l  300 (384)
T PRK12414        230 VSSFGKSYHVTGWRVGYCLAPA------ELMDEIRKVHQFMVFSADTPMQHA-FAEALAE--PASYLGLGAFYQRKRDLL  300 (384)
T ss_pred             EecccccccCccceEEEEecCH------HHHHHHHHHHhheecCCCcHHHHH-HHHHhcC--ChHHHHHHHHHHHHHHHH
Confidence            89999976  789999999987      666665543211112222333333 2333432  123445667788889999


Q ss_pred             HHHHHhcCcEEecCCCCCceEEEccCCC-C-CcHHHHHHhHhcCCeEEcCCCCCCCCC---CCCCCeEEEccCCCccCCC
Q 009673          387 ASRLVELGYKLVSGGSDNHLVLVDLRPM-G-IDGARVEKILDMASITLNKNSVPGDKS---ALVPGGIRIGSPAMTTRGF  461 (529)
Q Consensus       387 ~~~L~~~G~~v~~~gt~~~~~~v~~~~~-~-i~~~~~~~~L~~~GI~v~~~~~Pg~~~---~~~~~~iRig~~~~tt~g~  461 (529)
                      .+.|++.|+.+..+ ..++++|+++... + .+.+.+.+.|+++||.+.    ||+..   ....++|||++.      .
T Consensus       301 ~~~L~~~g~~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~----pg~~f~~~~~~~~~iRis~~------~  369 (384)
T PRK12414        301 ARELAGSRFELLPS-EGSFFMLARFRHFSDESDSDFVLRLIRDARVATI----PLSAFYTDGTDTGLIRLSFS------K  369 (384)
T ss_pred             HHHHHhCCCeecCC-CcceEEEEcccccCCCCHHHHHHHHHHhCCEEEe----cchhhcCCCCCCCEEEEEec------C
Confidence            99999888876644 2355666677531 2 234556678889999994    54431   112468999865      2


Q ss_pred             CHHHHHHHHHHHH
Q 009673          462 SEKEFVAIADFIH  474 (529)
Q Consensus       462 ~~~d~~~la~~i~  474 (529)
                      .++++++..+.|.
T Consensus       370 ~~~~~~~~~~rl~  382 (384)
T PRK12414        370 DDATLVEGARRLC  382 (384)
T ss_pred             CHHHHHHHHHHHh
Confidence            3677777777664

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.94  E-value=1.3e-24  Score=225.71  Aligned_cols=332  Identities=14%  Similarity=0.079  Sum_probs=225.5

Q ss_pred             ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673          104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE  183 (529)
Q Consensus       104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~  183 (529)
                      .+-+++++..+++.|.+++..... .          + +.++.+.++ .+++.+++++|+++++. ..+...+|++++..
T Consensus         4 ~~l~~pgp~~~~~~v~~~~~~~~~-~----------~-~~~~~~~~~-~~r~~la~l~~~~~~~~-~i~~t~~~t~al~~   69 (363)
T TIGR02326         4 YLLLTPGPLTTSRTVKEAMLFDWC-T----------W-DSDYNIVVE-QIRQQLLALATAEEGYT-SVLLQGSGTFAVEA   69 (363)
T ss_pred             eeEecCCCCCCCHHHHHHhCCCCC-C----------C-ChHHHHHHH-HHHHHHHHHhCCCCCce-EEEEcCCCHHHHHH
Confidence            456788888999999999865431 1          1 234555555 57799999999975321 12345666799999


Q ss_pred             HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-CCcEEEEcCCCC
Q 009673          184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASAY  262 (529)
Q Consensus       184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-~pklIi~~~s~~  262 (529)
                      ++.+++.+||.+++..+.+.+.   .+.   ......|.  +++.++++ +++.+|++++++.++.. +++++.+.+..+
T Consensus        70 ~~~~l~~~~~~vlv~~~~~~~~---~~~---~~a~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~  140 (363)
T TIGR02326        70 VIGSAVPKDGKLLVVINGAYGA---RIV---QIAEYLGI--PHHVVDTG-EVEPPDVVEVEAILAADPAITHIALVHCET  140 (363)
T ss_pred             HHHhcCCCCCeEEEEeCChhhH---HHH---HHHHHcCC--ceEEEeCC-CCCCCCHHHHHHHHhhCCCccEEEEEeecC
Confidence            9999999999887765432111   000   11223454  44555554 45789999999998763 356666665554


Q ss_pred             CC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhh
Q 009673          263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA  339 (529)
Q Consensus       263 p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~  339 (529)
                      ++  ..|+++|.++|+++|+++++|++|+.|....+....   ++|++++|+||||.||.| |++++++      +..++
T Consensus       141 ~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~---~~D~~~~s~~K~l~~p~G~G~l~~~~------~~~~~  211 (363)
T TIGR02326       141 TTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAEL---HIDYLISSANKCIQGVPGFGFVIARQ------AELAA  211 (363)
T ss_pred             CccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhc---CccEEEecCccccccCCcceEEEECH------HHHHH
Confidence            44  789999999999999999999998877543322111   589999999999988888 9999987      33333


Q ss_pred             hccccc----------------CC-CCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcCcEEecCC
Q 009673          340 INNAVF----------------PG-LQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELGYKLVSGG  401 (529)
Q Consensus       340 i~~~~~----------------p~-~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~g  401 (529)
                      +.....                ++ ...+++...+.++..+++.+... ++++..+++.++++++.+.|.+.|+.++.+.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~  291 (363)
T TIGR02326       212 CKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDD  291 (363)
T ss_pred             hhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCc
Confidence            211000                01 11245666777888888776544 3677889999999999999998999886532


Q ss_pred             -CCCce-EEEccCCC-CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          402 -SDNHL-VLVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       402 -t~~~~-~~v~~~~~-~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                       ..++. .++.+... .++...+.+.|+++||.+..+.    .  ....+||||+....    +.+|++++++.|++++
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g~----~--~~~~~iRi~~~~~~----~~edv~~~l~~l~~~l  360 (363)
T TIGR02326       292 EIQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPGK----V--SQVDCFRIGNIGEV----DAADITRLLTAIGKAM  360 (363)
T ss_pred             ccCCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECCc----C--CCCCEEEEecCCCC----CHHHHHHHHHHHHHHh
Confidence             12232 33444321 2456778888989999996432    1  12468999975433    4799999999998875

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>PLN02651 cysteine desulfurase

Probab=99.94  E-value=2.6e-25  Score=231.13  Aligned_cols=324  Identities=17%  Similarity=0.207  Sum_probs=222.6

Q ss_pred             cCCCCCcHHHHHHHhhhhhccCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHh
Q 009673          109 ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA  187 (529)
Q Consensus       109 asen~~~~~V~eal~~~l~~~y~~G~p~~-r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~a  187 (529)
                      ++..++|+.|++++...+.+.+  +.|+. .+..+....+.++ .+++.+++++|+++++   .+...+|++++..++.+
T Consensus         6 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~---v~~t~~~t~a~~~~l~~   79 (364)
T PLN02651          6 QATTPIDPRVLDAMLPFLIEHF--GNPHSRTHLYGWESEDAVE-KARAQVAALIGADPKE---IIFTSGATESNNLAIKG   79 (364)
T ss_pred             cCCCCCCHHHHHHHHHHHHhCC--CCCChhhhHHHHHHHHHHH-HHHHHHHHHhCCCCCe---EEEeCCHHHHHHHHHHH
Confidence            4556889999999988876544  33432 1111223333444 5679999999998753   23334555887776655


Q ss_pred             h----cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 009673          188 I----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP  263 (529)
Q Consensus       188 l----l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p  263 (529)
                      +    .++||+|++.+.+|++.....     ..+...|.  +++.++++ +++.+|++++++.+++ +++++++..++|+
T Consensus        80 ~~~~~~~~g~~vl~~~~~h~s~~~~~-----~~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~i~~-~t~lv~v~~~~n~  150 (364)
T PLN02651         80 VMHFYKDKKKHVITTQTEHKCVLDSC-----RHLQQEGF--EVTYLPVK-SDGLVDLDELAAAIRP-DTALVSVMAVNNE  150 (364)
T ss_pred             HHHhccCCCCEEEEcccccHHHHHHH-----HHHHhcCC--EEEEEccC-CCCcCCHHHHHHhcCC-CcEEEEEECCCCC
Confidence            4    578999999888776542211     11122343  55566665 4678999999999987 8999988877666


Q ss_pred             C--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh
Q 009673          264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI  340 (529)
Q Consensus       264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i  340 (529)
                      +  ..|+++|.++|+++|+++++|++|+.|.+..+....   ++|++++|.||| .||.| |+++++++      ....+
T Consensus       151 tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~---~~D~~~~s~hK~-~gp~G~g~l~v~~~------~~~~l  220 (364)
T PLN02651        151 IGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDL---GVDLMSISGHKI-YGPKGVGALYVRRR------PRVRL  220 (364)
T ss_pred             ceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccC---CCCEEEechhhh-CCCCceEEEEEcCC------CCCCC
Confidence            5  789999999999999999999999988765443222   589999999997 68998 99999884      22222


Q ss_pred             cccc------cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cCcEEecCC-CC---CceEE
Q 009673          341 NNAV------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGG-SD---NHLVL  408 (529)
Q Consensus       341 ~~~~------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G~~v~~~g-t~---~~~~~  408 (529)
                      ....      .....|+|+...++++..+++.+.. +.++..++..+.++++.+.|.+  .|++++.+. .+   .+++.
T Consensus       221 ~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~  299 (364)
T PLN02651        221 EPLMSGGGQERGRRSGTENTPLVVGLGAACELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLN  299 (364)
T ss_pred             CccccCCCccCCccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEE
Confidence            2111      1224688999999999999988764 4577778888888889998875  389888741 11   22333


Q ss_pred             EccCCCCCcHHHHHHhHhcCCeEEcCCCC--CCC-----C----C---CCCCCeEEEccCCCccCCCCHHHH
Q 009673          409 VDLRPMGIDGARVEKILDMASITLNKNSV--PGD-----K----S---ALVPGGIRIGSPAMTTRGFSEKEF  466 (529)
Q Consensus       409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~--Pg~-----~----~---~~~~~~iRig~~~~tt~g~~~~d~  466 (529)
                      +.+  .+++++++.+.|.+  |.++.+..  ++.     .    +   ....+.+|+|+..+||    ++|+
T Consensus       300 ~~~--~~~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t----~~di  363 (364)
T PLN02651        300 LSF--AYVEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTT----EEEV  363 (364)
T ss_pred             EEe--CCCCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCC----HHHc
Confidence            334  46778888888876  88865431  110     0    0   0124689999998887    5665

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.94  E-value=2e-24  Score=219.55  Aligned_cols=340  Identities=16%  Similarity=0.147  Sum_probs=248.0

Q ss_pred             ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673          104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE  183 (529)
Q Consensus       104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~  183 (529)
                      .+.|++++..+++.|++||.....++++           .++.+.++ .+.+.++.+|+.+...  +.+...||+.++.+
T Consensus         6 ~~Ll~PGP~~v~~~V~~am~~~~~~h~s-----------~~F~~~~~-~~~~~L~~v~~t~~~~--~~ll~gsGt~amEA   71 (383)
T COG0075           6 RLLLTPGPVPVPPRVLLAMARPMVGHRS-----------PDFVGIMK-EVLEKLRKVFGTENGD--VVLLSGSGTLAMEA   71 (383)
T ss_pred             ceeeeCCCCCCCHHHHHHhcCCCCCCCC-----------HHHHHHHH-HHHHHHHHHhcCCCCc--EEEEcCCcHHHHHH
Confidence            3678999999999999999876554332           23444444 4558899999998422  45667889999999


Q ss_pred             HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-CCcEEEEcCCCC
Q 009673          184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASAY  262 (529)
Q Consensus       184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-~pklIi~~~s~~  262 (529)
                      ++.++++|||+||+...   |.+++.+.   ..+...|.  +++.+... +...+|++++++.+++. ..++|.+.+...
T Consensus        72 av~sl~~pgdkVLv~~n---G~FG~R~~---~ia~~~g~--~v~~~~~~-wg~~v~p~~v~~~L~~~~~~~~V~~vH~ET  142 (383)
T COG0075          72 AVASLVEPGDKVLVVVN---GKFGERFA---EIAERYGA--EVVVLEVE-WGEAVDPEEVEEALDKDPDIKAVAVVHNET  142 (383)
T ss_pred             HHHhccCCCCeEEEEeC---ChHHHHHH---HHHHHhCC--ceEEEeCC-CCCCCCHHHHHHHHhcCCCccEEEEEeccC
Confidence            99999999999999874   33333331   12344555  44444443 45689999999999853 356777765544


Q ss_pred             CC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCC---------
Q 009673          263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDP---------  330 (529)
Q Consensus       263 p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~---------  330 (529)
                      ++  ..|+++|+++|++||+++|+|+..+.|....+....   ++|+++++.+|+|.+|.| |++..+++.         
T Consensus       143 STGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~w---giDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~  219 (383)
T COG0075         143 STGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEW---GIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKH  219 (383)
T ss_pred             cccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhc---CccEEEecCchhccCCCccceeEECHHHHHHHhcCCC
Confidence            44  779999999999999999999986666543322222   699999999999999999 999998752         


Q ss_pred             c-ch---hHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC-CCCCc
Q 009673          331 V-LG---VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG-GSDNH  405 (529)
Q Consensus       331 ~-~~---~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~-gt~~~  405 (529)
                      . ..   .++.+..++.  ..+..||..+.+.|+..||+.+..++++++.++++++++++++.+++.|++++.. ...+.
T Consensus       220 ~~~ylDL~~~~~~~~~~--~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~  297 (383)
T COG0075         220 PSFYLDLKKWLKYMEKK--GSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFADPERRSP  297 (383)
T ss_pred             CceeecHHHHHHHHhhc--CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCC
Confidence            0 11   1222223221  2234578999999999999999988899999999999999999999999998873 22222


Q ss_pred             eEEEccCCCCCcHHHHH-HhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          406 LVLVDLRPMGIDGARVE-KILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       406 ~~~v~~~~~~i~~~~~~-~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      .+..-..+.++++.++. ..++++||.+..+.     +++....+|||+...    .+.+|+..++.+|..++...
T Consensus       298 tvta~~~P~g~~~~~~~~~~~~~~g~~i~gg~-----~~l~gkifRIGhMG~----~~~~dv~~~l~ale~~L~~~  364 (383)
T COG0075         298 TVTAIKVPEGVDDKKVRRALLKEYGVEIAGGQ-----GPLKGKIFRIGHMGN----VRPEDVLAALAALEAALREL  364 (383)
T ss_pred             ceEEEECCCCCCcHHHHHHHHHhCCEEecccc-----cccCccEEEEecCcc----CCHHHHHHHHHHHHHHHHHc
Confidence            33333446777765544 46677899985432     345567899998652    56899999999999998754

>PRK06108 aspartate aminotransferase; Provisional

Probab=99.94  E-value=1.1e-24  Score=227.84  Aligned_cols=334  Identities=14%  Similarity=0.069  Sum_probs=222.1

Q ss_pred             hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC--CCCCCCceeeecCCh
Q 009673          102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSG  177 (529)
Q Consensus       102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g--~~~~~~~~~V~~~sG  177 (529)
                      ...++|..+++.  +++.+.+++...+.+.. .+|+.      .....++++...+++.+.+|  ++++    +|.+++|
T Consensus        24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~lr~~la~~~~~~~~~~~~~~----~i~~t~g   92 (382)
T PRK06108         24 EGVLPLWFGESDLPTPDFIRDAAAAALADGE-TFYTH------NLGIPELREALARYVSRLHGVATPPE----RIAVTSS   92 (382)
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHHHHHhCCCcCcc----eEEEeCC
Confidence            356889888763  57899999887765421 12322      11234566666688888888  4443    4555676


Q ss_pred             H-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC--CCCCCCHHHHHHHhhhcCCcE
Q 009673          178 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE--STGLVDYDMLEKTAILFRPKL  254 (529)
Q Consensus       178 s-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~--~~~~iD~d~le~~i~~~~pkl  254 (529)
                      + +++..++.++++|||+|++.+|.|..+..        .+...|.  +++.++++.  +++.+|++++++.+++ ++++
T Consensus        93 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~~d~~~l~~~~~~-~~~~  161 (382)
T PRK06108         93 GVQALMLAAQALVGPGDEVVAVTPLWPNLVA--------APKILGA--RVVCVPLDFGGGGWTLDLDRLLAAITP-RTRA  161 (382)
T ss_pred             hHHHHHHHHHHhcCCCCEEEEeCCCccchHH--------HHHHCCC--EEEEeeCCCCCCCccCCHHHHHHhcCc-cceE
Confidence            6 89999999999999999999998754421        2334454  566666653  2467999999999876 8999


Q ss_pred             EEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccc-c-ccCCCC---C--cccEEEecccccc--cCCC
Q 009673          255 IIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAA-S-VVADPF---K--YCDVVTTTTHKSL--RGPR  320 (529)
Q Consensus       255 Ii~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~-~-~~~~~~---~--~aDiv~~S~hK~l--~Gpr  320 (529)
                      |+++.++||+  ..   ++++|.++|+++|+++|+|++|. ++... + ..+..+   .  ...+++.|+||++  +|+|
T Consensus       162 i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R  240 (382)
T PRK06108        162 LFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYE-RLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWR  240 (382)
T ss_pred             EEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhh-hhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccc
Confidence            9998888887  33   57889999999999999999954 44332 1 111111   1  1347889999976  6888


Q ss_pred             CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEec
Q 009673          321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS  399 (529)
Q Consensus       321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~  399 (529)
                      .||+++++      ++.+.+.........+.+...+.+ ...++... ...+++..+++.++++.+.+.|.+. |+.+..
T Consensus       241 iG~~~~~~------~~~~~~~~~~~~~~~~~~~~~q~a-~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~  312 (382)
T PRK06108        241 LGWLVAPP------ALGQVLEKLIEYNTSCVAQFVQRA-AVAALDEG-EDFVAELVARLRRSRDHLVDALRALPGVEVAK  312 (382)
T ss_pred             eeeeeCCH------HHHHHHHHHHHhcccCCChHHHHH-HHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhCCCCcccC
Confidence            99999987      676666543211112233333333 33345421 1234677888888899999999874 777665


Q ss_pred             CCCCCceEEEccCCCCCcHHHHHHh-HhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          400 GGSDNHLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       400 ~gt~~~~~~v~~~~~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      + ..+.++|+++.. ..+..++.+. ++++||.+.    ||.. ++..++++||++..      +++++++..+.|++++
T Consensus       313 p-~~g~~~~~~l~~-~~~~~~~~~~ll~~~gV~v~----pg~~f~~~~~~~~Ris~~~------~~~~l~~~l~~l~~~l  380 (382)
T PRK06108        313 P-DGAMYAFFRIPG-VTDSLALAKRLVDEAGLGLA----PGTAFGPGGEGFLRWCFAR------DPARLDEAVERLRRFL  380 (382)
T ss_pred             C-CeeEEEEEeCCC-CCCHHHHHHHHHHhCCEEEe----CchhhCCCCCCEEEEEecC------CHHHHHHHHHHHHHHH
Confidence            4 224556777753 2355556554 578999994    4433 22235789998753      4789999998888765


Q ss_pred             H
Q 009673          478 E  478 (529)
Q Consensus       478 ~  478 (529)
                      .
T Consensus       381 ~  381 (382)
T PRK06108        381 A  381 (382)
T ss_pred             h
Confidence            3

>PRK08361 aspartate aminotransferase; Provisional

Probab=99.94  E-value=1.4e-24  Score=227.99  Aligned_cols=338  Identities=16%  Similarity=0.191  Sum_probs=221.4

Q ss_pred             hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673          102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-  178 (529)
Q Consensus       102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-  178 (529)
                      .+.|+|..+++.  +++.+.+++...+...+. +|      .......++++...+++.+.+|...+.  .+|.+++|+ 
T Consensus        33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y------~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~~  103 (391)
T PRK08361         33 ENVISLGIGEPDFDTPKNIKEAAKRALDEGWT-HY------TPNAGIPELREAIAEYYKKFYGVDVDV--DNVIVTAGAY  103 (391)
T ss_pred             cCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-CC------CCCCCcHHHHHHHHHHHHHHhCCCCCc--ccEEEeCChH
Confidence            356888877764  467888888776643321 12      112223466666667777777754221  255667776 


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEE
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA  257 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~  257 (529)
                      +|+..++.++++|||+|++++|.|.+...        .+...|.  +++.++++++ ++.+|++++++.+++ ++++|++
T Consensus       104 ~al~~~~~~l~~~g~~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~-~~~~v~i  172 (391)
T PRK08361        104 EATYLAFESLLEEGDEVIIPDPAFVCYVE--------DAKIAEA--KPIRIPLREENEFQPDPDELLELITK-RTRMIVI  172 (391)
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcccHH--------HHHHcCC--EEEEEecCCccCCCCCHHHHHHhccc-ccEEEEE
Confidence            89999999999999999999998765421        2334454  6667777654 468999999999987 7899999


Q ss_pred             cCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-cccEEEecccccc--cCCCCeEEEe
Q 009673          258 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSL--RGPRGGMIFF  326 (529)
Q Consensus       258 ~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~-~aDiv~~S~hK~l--~GprgG~i~~  326 (529)
                      ++|+||+  ..+   +++|.++|+++++++|+|+++. .+.+.+....++   . ..+++++|+||++  +|.|.||+++
T Consensus       173 ~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~  251 (391)
T PRK08361        173 NYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYE-HFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIA  251 (391)
T ss_pred             eCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccc-cceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhcc
Confidence            8889987  566   7888899999999999999954 333322111111   1 2458889999987  6778899999


Q ss_pred             eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCC
Q 009673          327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS-PEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDN  404 (529)
Q Consensus       327 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~-~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~  404 (529)
                      ++      ++.+.+.........+.+...+.++ ..+++.-.. ...++..+++.++++.+.+.|++. |+.+..+ ..+
T Consensus       252 ~~------~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p-~g~  323 (391)
T PRK08361        252 PE------QVIKDMIKLHAYIIGNVASFVQIAG-IEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEP-KGA  323 (391)
T ss_pred             CH------HHHHHHHHHHhhhccCCChHHHHHH-HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCC-CEE
Confidence            87      5666554322111112222222222 223432111 123666777888888899999885 7776544 234


Q ss_pred             ceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          405 HLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       405 ~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .++|+++...+++..++...| +++||.+.    ||.. +...++++||++.      .+++++++..+.|.++++
T Consensus       324 ~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~----pg~~f~~~~~~~iRi~~~------~~~~~l~~al~~l~~~l~  389 (391)
T PRK08361        324 FYVFANIDETGMSSEDFAEWLLEKARVVVI----PGTAFGKAGEGYIRISYA------TSKEKLIEAMERMEKALE  389 (391)
T ss_pred             EEEEEECCCCCCCHHHHHHHHHHhCCEEEc----CchhhCCCCCCEEEEEec------CCHHHHHHHHHHHHHHHh
Confidence            567778764456676776655 67899994    4443 2223578999864      246778888877777654

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=99.94  E-value=3.3e-24  Score=224.45  Aligned_cols=334  Identities=16%  Similarity=0.125  Sum_probs=220.2

Q ss_pred             hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673          102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-  178 (529)
Q Consensus       102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-  178 (529)
                      .+.++|..+++.  +++.+.+++...+......+|+.   ..|   ..++++.+.+++.+.+|.+.+.- -+|.+++|+ 
T Consensus        29 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~lr~~ia~~~~~~~~~~~~~~-~~vi~t~G~~  101 (383)
T TIGR03540        29 VDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPS---YEG---MLAYRQAVADWYKRRFGVELDPE-TEVLSLIGSK  101 (383)
T ss_pred             CCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCC---CHHHHHHHHHHHHHhhCCCCCCC-CeEEECCCcH
Confidence            356788777653  57888999887664321123332   122   34566666688888778753211 146678887 


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEE
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA  257 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~  257 (529)
                      +++..++.++++|||+|++++|.|..+..        .....|.  ++++++++++ ++.+|++++++.+.+ ++++|++
T Consensus       102 ~~l~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~G~--~v~~v~~~~~~g~~~d~~~l~~~~~~-~~~~v~i  170 (383)
T TIGR03540       102 EGIAHIPLAFVNPGDIVLVPDPGYPVYRI--------GTLFAGG--EPYEMPLKEENGFLPDFDAIPEDIAK-KAKLMFI  170 (383)
T ss_pred             HHHHHHHHHhCCCCCEEEEeCCCCcchHH--------HHHhcCC--EEEEEecCcccCCccCHHHHHhhccc-cceEEEE
Confidence            89999999999999999999998765421        2334554  6667777644 467899999988876 8999999


Q ss_pred             cCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC---CC---cccEEEecccccc--cCCCCeEE
Q 009673          258 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK---YCDVVTTTTHKSL--RGPRGGMI  324 (529)
Q Consensus       258 ~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~~---~aDiv~~S~hK~l--~GprgG~i  324 (529)
                      ++|+||+  ..+   +++|.++|++||+++|+|+++. .+.+.+....+   +.   ...+++.|++|++  +|.|.||+
T Consensus       171 ~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~  249 (383)
T TIGR03540       171 NYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYS-EITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMA  249 (383)
T ss_pred             eCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchh-hhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEE
Confidence            9889997  444   7888999999999999999954 33333211111   11   1237789999987  68899999


Q ss_pred             EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCC
Q 009673          325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN  404 (529)
Q Consensus       325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~  404 (529)
                      ++++      ++.+++.........+.+...+ .++..++... ....++..+++.++++.+.+.|++.|+.+..+. .+
T Consensus       250 i~~~------~l~~~~~~~~~~~~~~~~~~~q-~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~-~~  320 (383)
T TIGR03540       250 VGNA------DLIAGLGKVKTNVDSGVFQAIQ-YAAIAALNGP-QDVVKEIRKIYQRRRDLLLEALKKIGIDVEKPK-AT  320 (383)
T ss_pred             eCCH------HHHHHHHHHHHhcccCCChHHH-HHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCC-cc
Confidence            9887      6766665432211122222333 3333345431 123366677888999999999999888876542 35


Q ss_pred             ceEEEccCCCCCcHHHHHHh-HhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673          405 HLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH  474 (529)
Q Consensus       405 ~~~~v~~~~~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~  474 (529)
                      .++|+++. .+++..++... |+++||.+..    |.. +...++++||++.      .+++++++..+.|.
T Consensus       321 ~~~~~~l~-~~~~~~~~~~~ll~~~gi~v~~----g~~f~~~~~~~~Ris~~------~~~~~l~~~l~~l~  381 (383)
T TIGR03540       321 FYVWVPVP-EGYTSAEFAARLLEETGVVVTP----GVGFGEYGEGYIRISLT------VPDERLEEAVARIK  381 (383)
T ss_pred             eEEEEECC-CCCCHHHHHHHHHHHCCEEEec----chhhCccCCCeEEEEec------CCHHHHHHHHHHHh
Confidence            66777775 35666666655 5789999954    432 1122468999974      23566666665554

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=99.94  E-value=4.6e-25  Score=231.58  Aligned_cols=312  Identities=20%  Similarity=0.274  Sum_probs=220.7

Q ss_pred             CCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccc
Q 009673          140 YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSG  219 (529)
Q Consensus       140 ~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~  219 (529)
                      |++.....++|    +.++++||.+.     .|.+++|+.|+..++.++++|||+|+ +++.+..        +...+..
T Consensus        49 Y~~~~g~~~Le----eaia~~~g~~~-----vv~t~~Gt~Al~la~~al~~pGD~V~-~~~~f~~--------~~~~i~~  110 (431)
T cd00617          49 YAGSKSFYDLE----DAVQDLFGFKH-----IIPTHQGRGAENILFSILLKPGRTVP-SNMHFDT--------TRGHIEA  110 (431)
T ss_pred             cCCCCCHHHHH----HHHHHHHCCCe-----EEEcCCHHHHHHHHHHHhCCCCCEEc-cCCcccc--------hHHHHHh
Confidence            44445566777    56778888875     25567888999999999999999874 5443322        1223455


Q ss_pred             ccceEEEEEcccCCC---------CCCCCHHHHHHHhhhc---CCcEEEEcCCCCCC---CC---CHHHHHHHHHHhCCE
Q 009673          220 TSIYFESMPYRLDES---------TGLVDYDMLEKTAILF---RPKLIIAGASAYPR---DF---DYPRMRQIADAVGAL  281 (529)
Q Consensus       220 ~g~~~~~v~~~v~~~---------~~~iD~d~le~~i~~~---~pklIi~~~s~~p~---~~---d~~~i~~ia~~~g~~  281 (529)
                      .|.  +++.+++++.         ++.+|+++|++.+++.   ++++|+++.|+|++   ..   ++++|.++|++||++
T Consensus       111 ~Ga--~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~  188 (431)
T cd00617         111 NGA--VPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIP  188 (431)
T ss_pred             CCC--EeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence            665  6777777532         3569999999999863   37889998888864   33   467889999999999


Q ss_pred             EEEeccccccccc------ccccCCC--------CCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcccc--c
Q 009673          282 LMMDMAHISGLVA------ASVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAV--F  345 (529)
Q Consensus       282 livD~ah~~Gli~------~~~~~~~--------~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~--~  345 (529)
                      ||.|+||..+...      .+....+        +.++|.+++|+||.+.++-||+++++++     ++.++++...  +
T Consensus       189 li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~-----~l~~~~~~~~~~~  263 (431)
T cd00617         189 VVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIGGFLALRDD-----ELYEEARQRVVLY  263 (431)
T ss_pred             EEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccceEEEeCcH-----HHHHHHHHhcccc
Confidence            9999998765221      1222222        2368999999999988888999999984     5777766422  1


Q ss_pred             CC--CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCC-------CC
Q 009673          346 PG--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM-------GI  416 (529)
Q Consensus       346 p~--~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~-------~i  416 (529)
                      .+  ..|+.+...++|++.+|++...   .++.++..+++++|.+.|.+.|++++.+ ...|++++|+...       +.
T Consensus       264 ~~~~~~gG~~~r~~~A~A~gL~e~~~---~~~l~~~~~~r~~l~~~L~~~G~~v~~P-~Ggh~v~~d~~~~~~~~~~~~~  339 (431)
T cd00617         264 EGFVTYGGMAGRDMEALAQGLREAVE---EDYLRHRVEQVRYLGDRLDEAGVPIVEP-AGGHAVFIDAREFLPHIPQEQF  339 (431)
T ss_pred             CCccccccccHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHCCCCccCC-CcceEEEEEhHHhcCCCCcccC
Confidence            11  2466677778888778876432   3556667778899999999999998875 3469999987632       12


Q ss_pred             cHHH-HHHhHhcCCeEEcC-CCC--CCCCC-C--C--CCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 009673          417 DGAR-VEKILDMASITLNK-NSV--PGDKS-A--L--VPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEA  483 (529)
Q Consensus       417 ~~~~-~~~~L~~~GI~v~~-~~~--Pg~~~-~--~--~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~~  483 (529)
                      ++.. +..++++.||.+.. +++  +.+.. .  .  ....+|+++|   +|+++.++|+++++.|.+++++...+
T Consensus       340 ~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~p---rr~~t~~~~~~~~~~~~~~~~~~~~~  412 (431)
T cd00617         340 PAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIP---RRVYTQDHMDYVAAAVIALYERREDI  412 (431)
T ss_pred             cHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEecc---ccccCHHHHHHHHHHHHHHHhhHhhC
Confidence            3444 45778999999643 221  32221 0  1  1368999988   68999999999999999999876444

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>PRK05957 aspartate aminotransferase; Provisional

Probab=99.94  E-value=3.1e-24  Score=225.09  Aligned_cols=358  Identities=14%  Similarity=0.106  Sum_probs=230.4

Q ss_pred             cccCChHHHHHHHHHHHHhhcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673           83 LGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA  160 (529)
Q Consensus        83 l~~~d~~~~~~~~~e~~~~~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~  160 (529)
                      +....+.++..+.....+....++|..+++  .+++.+.+|+...+.+.-..+|+.   ..|   ..++.+.+++++++.
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~---~~G---~~~lr~~~~~~l~~~   81 (389)
T PRK05957          8 MDAVQSPIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQA---VQG---IPPLLEAITQKLQQD   81 (389)
T ss_pred             HHhcCCcHHHHHHHHHHhCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCC---CHHHHHHHHHHHHHH
Confidence            333444444433333332235588887775  368889999987664321112322   112   234555666888888


Q ss_pred             cCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCC
Q 009673          161 FNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD  239 (529)
Q Consensus       161 ~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD  239 (529)
                      +|.+.+.. .+|.+++|+ +++..++.++++|||+|++++|.|..+..        .+...|.  +++.++++ +++.+|
T Consensus        82 ~g~~~~~~-~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d  149 (389)
T PRK05957         82 NGIELNNE-QAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEM--------AITMAGC--QPILVPTD-DNYQLQ  149 (389)
T ss_pred             hCCCCCCC-CeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHH--------HHHhcCC--EEEEeecC-CCCCcC
Confidence            89753201 246668887 88888889999999999999988765432        1233454  66666665 457899


Q ss_pred             HHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccc-cCCCC---C-c-ccEE
Q 009673          240 YDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF---K-Y-CDVV  308 (529)
Q Consensus       240 ~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~~---~-~-aDiv  308 (529)
                      +|++++.+++ ++|+|++++++||+  ..+   +++|.++|+++|+++++|+++ ..+.+.+. ...+.   + . -.|+
T Consensus       150 ~~~l~~~i~~-~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y-~~~~~~~~~~~~~~~~~~~~~~~i~  227 (389)
T PRK05957        150 PEAIEQAITP-KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAY-EYFTYDGVKHFSPGSIPGSGNHTIS  227 (389)
T ss_pred             HHHHHHhcCc-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccc-hhccCCCCCccChhhCCCccCcEEE
Confidence            9999999987 89999999899987  445   888999999999999999984 44443321 11111   1 1 2378


Q ss_pred             Eecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 009673          309 TTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL  386 (529)
Q Consensus       309 ~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l  386 (529)
                      +.|++|.+  +|.|.||+++++      ++.+++.........+.+...+.++. .+++.- ...+++..+++.++++.+
T Consensus       228 ~~S~SK~~g~~GlRiG~~~~~~------~~~~~~~~~~~~~~~~~~~~~q~~~~-~~l~~~-~~~~~~~~~~~~~~r~~l  299 (389)
T PRK05957        228 LYSLSKAYGFASWRIGYMVIPI------HLLEAIKKIQDTILICPPVVSQYAAL-GALQVG-KSYCQQHLPEIAQVRQIL  299 (389)
T ss_pred             EecchhhccCccceeEEEecCH------HHHHHHHHHHhhcccCCCcHHHHHHH-HHHhCC-hHHHHHHHHHHHHHHHHH
Confidence            89999986  788899999987      67776655432222233333333332 234321 122467778888999999


Q ss_pred             HHHHHhc-Cc-EEecCCCCCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCC
Q 009673          387 ASRLVEL-GY-KLVSGGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFS  462 (529)
Q Consensus       387 ~~~L~~~-G~-~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~  462 (529)
                      .+.|++. ++ .+..+ ..+.++|+++. .+++..++.+.| +++||.+    .||+. +....+++||++..     ..
T Consensus       300 ~~~L~~~~~~~~~~~~-~gg~~~~~~~~-~~~~~~~~~~~l~~~~gv~v----~pg~~f~~~~~~~iRis~~~-----~~  368 (389)
T PRK05957        300 LKSLGQLQDRCTLHPA-NGAFYCFLKVN-TDLNDFELVKQLIREYRVAV----IPGTTFGMKNGCYLRIAYGA-----LQ  368 (389)
T ss_pred             HHHHHhcCCCccccCC-CeeEEEEEeCC-CCCChHHHHHHHHHHCCEEE----ccchhhCCCCCCEEEEEEec-----CC
Confidence            9999874 43 43332 22456677774 356666666665 6799999    45543 12224689999753     24


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 009673          463 EKEFVAIADFIHEGVEI  479 (529)
Q Consensus       463 ~~d~~~la~~i~~~~~~  479 (529)
                      ++++++..+.|.+.++.
T Consensus       369 ~~~l~~~~~~l~~~~~~  385 (389)
T PRK05957        369 KATAKEGIERLVQGLKT  385 (389)
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            67888888877776653

>PRK06348 aspartate aminotransferase; Provisional

Probab=99.94  E-value=2.6e-24  Score=225.32  Aligned_cols=359  Identities=13%  Similarity=0.103  Sum_probs=227.5

Q ss_pred             chhhhhcccCChHHHHHHHHHHHHhhcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHH
Q 009673           77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ  154 (529)
Q Consensus        77 ~~~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~  154 (529)
                      .++.+.+.......+..+..........++|..+++.  +++.+++++...+.+.. ..|+.      .....++++.+.
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~lr~~ia   76 (384)
T PRK06348          4 KFLAKKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKKGH-TRYTD------SGGDVELIEEII   76 (384)
T ss_pred             hHHHHHHhcCCccHHHHHHHHHHhcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCcHHHHHHHH
Confidence            3445556555666554444333222356888877753  35677765544433221 12222      222345666666


Q ss_pred             HHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC
Q 009673          155 KRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE  233 (529)
Q Consensus       155 ~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~  233 (529)
                      +++.+.+|...+.  -+|.+++|+ +|+..++.++++|||+|++++|.|.++..        .+...|.  +++++++++
T Consensus        77 ~~~~~~~~~~~~~--~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~  144 (384)
T PRK06348         77 KYYSKNYDLSFKR--NEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKD--------QIEMVGG--KPIILETYE  144 (384)
T ss_pred             HHHHHHhCCCCCh--hhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHH--------HHHHcCC--EEEEecCCc
Confidence            7777776654321  256678888 89999999999999999999998765432        2334454  566666542


Q ss_pred             -CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCC--CCC--
Q 009673          234 -STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK--  303 (529)
Q Consensus       234 -~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~~--  303 (529)
                       +++.+|+++|++.+++ ++++|+++.|+||+  ..   ++++|.++|+++|++||+|++ |.++.+.+....  .+.  
T Consensus       145 ~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~-y~~~~~~~~~~~~~~~~~~  222 (384)
T PRK06348        145 EDGFQINVKKLEALITS-KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEV-YDGFSFYEDFVPMATLAGM  222 (384)
T ss_pred             CcCCcCCHHHHHHhhCc-CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecc-cccceeCCCccchhhcCCC
Confidence             3567999999998876 89999998899997  33   478888999999999999998 445544321111  111  


Q ss_pred             -cccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHH
Q 009673          304 -YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV  380 (529)
Q Consensus       304 -~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~  380 (529)
                       ...+++.|++|++  +|.|.||+++++      ++.+.+.........+.+...+.+ ++.++... ....++..+.+.
T Consensus       223 ~~~vi~~~SfSK~~~l~GlRiG~~v~~~------~~~~~~~~~~~~~~~~~~~~~q~~-~~~~l~~~-~~~~~~~~~~~~  294 (384)
T PRK06348        223 PERTITFGSFSKDFAMTGWRIGYVIAPD------YIIETAKIINEGICFSAPTISQRA-AIYALKHR-DTIVPLIKEEFQ  294 (384)
T ss_pred             cCcEEEEecchhccCCccccceeeecCH------HHHHHHHHHHHhccCCCCHHHHHH-HHHHHhCc-HHHHHHHHHHHH
Confidence             1237889999986  689999999987      677666543322122333333333 23344321 112355667777


Q ss_pred             HHHHHHHHHHHhc-CcEEecCCCCCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCc
Q 009673          381 SNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDK-SALVPGGIRIGSPAMT  457 (529)
Q Consensus       381 ~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~t  457 (529)
                      ++++.+.+.|.+. ++.+..+ ..++++|++++..+++..++.+.| +++||.+.    ||+. +...+++|||++.   
T Consensus       295 ~r~~~~~~~L~~~~~~~~~~p-~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~----pg~~f~~~~~~~iRi~~~---  366 (384)
T PRK06348        295 KRLEYAYKRIESIPNLSLHPP-KGSIYAFINIKKTGLSSVEFCEKLLKEAHVLVI----PGKAFGESGEGYIRLACT---  366 (384)
T ss_pred             HHHHHHHHHHhcCCCceeccC-CeeEEEEEecccCCCCHHHHHHHHHHhCCEEEc----CchhhccCCCCeEEEEec---
Confidence            8888899999874 6665543 234567878764456666666554 67899994    4443 2223578999963   


Q ss_pred             cCCCCHHHHHHHHHHHHH
Q 009673          458 TRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       458 t~g~~~~d~~~la~~i~~  475 (529)
                         .+++++++..+.|++
T Consensus       367 ---~~~~~l~~al~~l~~  381 (384)
T PRK06348        367 ---VGIEVLEEAFNRIEK  381 (384)
T ss_pred             ---CCHHHHHHHHHHHHh
Confidence               246777777776654

>PRK06207 aspartate aminotransferase; Provisional

Probab=99.94  E-value=2.6e-24  Score=226.78  Aligned_cols=340  Identities=15%  Similarity=0.123  Sum_probs=224.3

Q ss_pred             hcceeEecCC-C--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673          102 FKSLELIASE-N--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS  178 (529)
Q Consensus       102 ~~~i~L~ase-n--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs  178 (529)
                      .+.++|..++ +  .+++.+++++...+.+....+|+.   ..|   ..++.+.+.+++++.+|.+.+.- -+|.+++|+
T Consensus        39 ~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~LR~aia~~l~~~~g~~~~~~-~~I~it~Ga  111 (405)
T PRK06207         39 GRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTE---YRG---DADIRELLAARLAAFTGAPVDAA-DELIITPGT  111 (405)
T ss_pred             CCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCC---CCC---CHHHHHHHHHHHHHHhCCCCCCC-CCEEEeCCc
Confidence            4567887544 4  356788888887664322223443   122   23566666788899889643210 146668887


Q ss_pred             -HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC---C-CCCCCCHHHHHHHhhhcCCc
Q 009673          179 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD---E-STGLVDYDMLEKTAILFRPK  253 (529)
Q Consensus       179 -~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~---~-~~~~iD~d~le~~i~~~~pk  253 (529)
                       +++..++.++++|||+|++++|.|.++.        ..+...|.  ++++++++   + +++.+|+++|++.+++ +++
T Consensus       112 ~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~--------~~~~~~g~--~v~~v~~~~~~~~~~~~~d~~~l~~~~~~-~~k  180 (405)
T PRK06207        112 QGALFLAVAATVARGDKVAIVQPDYFANR--------KLVEFFEG--EMVPVQLDYLSADKRAGLDLDQLEEAFKA-GVR  180 (405)
T ss_pred             HHHHHHHHHHhcCCCCEEEEeCCCchhHH--------HHHHHcCC--EEEEEeccccCcccCCCcCHHHHHHhhhh-cCe
Confidence             9999999999999999999999876542        12344555  55555554   1 2478999999999877 799


Q ss_pred             EEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---Cc-cc--EEEecccccc--cCCC
Q 009673          254 LIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY-CD--VVTTTTHKSL--RGPR  320 (529)
Q Consensus       254 lIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~~-aD--iv~~S~hK~l--~Gpr  320 (529)
                      +|++++|+||+  ..+   +++|.++|++||++||+|++ |..+.+.+....++   .. .|  +++.|++|++  +|+|
T Consensus       181 ~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~-Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlR  259 (405)
T PRK06207        181 VFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQL-YSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYR  259 (405)
T ss_pred             EEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc-ccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccc
Confidence            99999999997  444   77888999999999999998 44544433211111   11 12  7889999986  6999


Q ss_pred             CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEec
Q 009673          321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS  399 (529)
Q Consensus       321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~  399 (529)
                      .||+++++      ++.+++.........+.+.. ...++..+++.- ...+++..+++.++++.+.+.|++. |+.+..
T Consensus       260 iG~ii~~~------~l~~~~~~~~~~~~~~~~~~-~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~  331 (405)
T PRK06207        260 LGVAFGSP------AIIDRMEKLQAIVSLRAAGY-SQAVLRTWFSEP-DGWMKDRIARHQAIRDDLLRVLRGVEGVFVRA  331 (405)
T ss_pred             eEEEEcCH------HHHHHHHHHHhHhccCCCHH-HHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHhcCCCceecC
Confidence            99999887      67766654322222222222 223333344321 1224666777788888898999775 777654


Q ss_pred             CCCCCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          400 GGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       400 ~gt~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      + ....++|+++...+++..++.+.| +++||.+.    ||.. +...++++||++.      ..++++++..+.|.+++
T Consensus       332 p-~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~----pG~~F~~~~~~~~Ris~~------~~~~~l~~al~rl~~~l  400 (405)
T PRK06207        332 P-QAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVT----PGTEFSPHTADSIRLNFS------QDHAAAVAAAERIAQLI  400 (405)
T ss_pred             C-CeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEe----CchHhCCCCCCeEEEEec------CCHHHHHHHHHHHHHHH
Confidence            3 234677888864345666666666 57899994    5543 2223578999974      24688888888887776


Q ss_pred             HH
Q 009673          478 EI  479 (529)
Q Consensus       478 ~~  479 (529)
                      +.
T Consensus       401 ~~  402 (405)
T PRK06207        401 ER  402 (405)
T ss_pred             HH
Confidence            53

>PRK06290 aspartate aminotransferase; Provisional

Probab=99.94  E-value=2.2e-24  Score=227.40  Aligned_cols=337  Identities=16%  Similarity=0.083  Sum_probs=226.5

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChH-
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGS-  178 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs-  178 (529)
                      ..++|..+++.  +++.+.+++...+......+|+.    .|   ...+.+.+.+++.+.+|++ .+. .-+|.+|+|+ 
T Consensus        45 ~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~----~G---~~~lr~aia~~~~~~~g~~~~~~-~~~I~it~Gs~  116 (410)
T PRK06290         45 ELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYAD----NG---IQEFKEAAARYMEKVFGVKDIDP-VTEVIHSIGSK  116 (410)
T ss_pred             CeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC----CC---cHHHHHHHHHHHHHHcCCCcCCC-cceEEEccCHH
Confidence            35888888764  57788888876543221123331    12   3466666667887777865 221 0147789998 


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEE
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA  257 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~  257 (529)
                      +++..++.++++|||.|++++|.|.+...        .+...|.  +++.++++++ ++.+|++++++.+.. ++|+|++
T Consensus       117 ~al~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~v~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l  185 (410)
T PRK06290        117 PALAMLPSCFINPGDVTLMTVPGYPVTGT--------HTKYYGG--EVYNLPLLEENNFLPDLDSIPKDIKE-KAKLLYL  185 (410)
T ss_pred             HHHHHHHHHhCCCCCEEEEeCCCCccHHH--------HHHHcCC--EEEEEecCCCcCCcCCHHHHHHhhcc-cceEEEE
Confidence            89989999999999999999998754321        2334454  7777777754 477899999998876 8999999


Q ss_pred             cCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC--CC---cccEEEecccccc--cCCCCeEEE
Q 009673          258 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FK---YCDVVTTTTHKSL--RGPRGGMIF  325 (529)
Q Consensus       258 ~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~--~~---~aDiv~~S~hK~l--~GprgG~i~  325 (529)
                      ++|+||+  ..+   +++|.++|++||++||+|+++. .+.+.+..++.  +.   ..+|++.|++|.+  +|.|.||++
T Consensus       186 ~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~-~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii  264 (410)
T PRK06290        186 NYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYA-ALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVV  264 (410)
T ss_pred             ECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchh-hceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEE
Confidence            9999998  444   6778888999999999999954 44433321111  11   2458999999986  789999999


Q ss_pred             eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc
Q 009673          326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH  405 (529)
Q Consensus       326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~  405 (529)
                      +++      ++.+.+.........+.+...+.+ +..+++.  ....++..+++.++++.+.+.|++.|+.+..+ ..++
T Consensus       265 ~~~------~l~~~l~~~~~~~~~~~~~~~q~a-a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p-~g~f  334 (410)
T PRK06290        265 GNE------LIVKAFATVKDNNDSGQFIAIQKA-GIYALDH--PEITEKIREKYSRRLDKLVKILNEVGFKAEMP-GGTF  334 (410)
T ss_pred             eCH------HHHHHHHHHHhccccCCcHHHHHH-HHHHhhC--cHHHHHHHHHHHHHHHHHHHHHHhCCCeecCC-Ceee
Confidence            987      677766544333223332333332 2234432  12236677888899999999999988876643 2345


Q ss_pred             eEEEccCCCC------CcHHHHHHhHhcC-CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          406 LVLVDLRPMG------IDGARVEKILDMA-SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       406 ~~~v~~~~~~------i~~~~~~~~L~~~-GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ++|+.++..-      .+..++.+.|.+. +|.+    +||..  + .+++||++...+   -++++++++.+.|++.++
T Consensus       335 ~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~----~p~~~--~-~~~lRi~~~~~~---~~~~~~~~~~~~l~~~~~  404 (410)
T PRK06290        335 YLYVKAPKGTKSGIKFENAEEFSQYLIKEKLIST----VPWDD--A-GHFLRFSVTFEA---KDEEEEDRILEEIKRRLS  404 (410)
T ss_pred             EEEEECCCccccCCCCCCHHHHHHHHHHhCCEEE----ECCcc--c-cCeEEEEEEccc---ccccchhHHHHHHHHHHh
Confidence            6677775321      2455666666554 5554    46542  1 368999875433   458999999999999887


Q ss_pred             H
Q 009673          479 I  479 (529)
Q Consensus       479 ~  479 (529)
                      .
T Consensus       405 ~  405 (410)
T PRK06290        405 D  405 (410)
T ss_pred             h
Confidence            4

>PRK07682 hypothetical protein; Validated

Probab=99.94  E-value=1.6e-24  Score=226.37  Aligned_cols=337  Identities=15%  Similarity=0.101  Sum_probs=225.0

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.|+|..+++.  +++.+.+++...+.+.+ .+|+.      .....++++.+.+++.+.+|.+.+.- -+|.+++|+ +
T Consensus        21 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~~g~~~~~~-~~i~~t~G~~~   92 (378)
T PRK07682         21 GVISLGVGEPDFVTPWNVREASIRSLEQGY-TSYTA------NAGLLELRQEIAKYLKKRFAVSYDPN-DEIIVTVGASQ   92 (378)
T ss_pred             CeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCcHHHHHHHHHHHHHHhCCCCCCC-CcEEEeCChHH
Confidence            56889888864  46677888876654322 22322      22245666666788888778753210 146668876 9


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      |+..++.++++|||+|++++|.|....        ......|.  +++.++++. +++.+|++++++++.+ ++++|+++
T Consensus        93 al~~~~~~l~~~gd~vl~~~p~y~~~~--------~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~  161 (378)
T PRK07682         93 ALDVAMRAIINPGDEVLIVEPSFVSYA--------PLVTLAGG--VPVPVATTLENEFKVQPAQIEAAITA-KTKAILLC  161 (378)
T ss_pred             HHHHHHHHhCCCCCEEEEeCCCchhhH--------HHHHHcCC--EEEEeecCCccCCCCCHHHHHhhcCc-ccEEEEEE
Confidence            999999999999999999999875432        12333454  555666653 3578999999999877 89999888


Q ss_pred             CCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCC--CCC---cccEEEecccccc--cCCCCeEEEe
Q 009673          259 ASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK---YCDVVTTTTHKSL--RGPRGGMIFF  326 (529)
Q Consensus       259 ~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~~---~aDiv~~S~hK~l--~GprgG~i~~  326 (529)
                      .|+||+  ..   ++++|.++|++||+++|+|+++. .+.+.+...+  .+.   ...+++.|++|++  +|+|.||+++
T Consensus       162 ~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~  240 (378)
T PRK07682        162 SPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYA-ELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAA  240 (378)
T ss_pred             CCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhh-hcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhc
Confidence            899997  33   48899999999999999999854 4443321111  111   2348889999986  6889999999


Q ss_pred             eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673          327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL  406 (529)
Q Consensus       327 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~  406 (529)
                      ++      ++.+++.........+.+...+.+ ...+|+.. ....++.++++.++++.+.+.|++.|+.+..+ ..+++
T Consensus       241 ~~------~~i~~l~~~~~~~~~~~~~~~q~a-~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p-~g~~~  311 (378)
T PRK07682        241 PV------YFSEAMLKIHQYSMMCAPTMAQFA-ALEALRAG-NDDVIRMRDSYRKRRNFFVTSFNEIGLTCHVP-GGAFY  311 (378)
T ss_pred             CH------HHHHHHHHHHHhhccCCCHHHHHH-HHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHCCCccCCC-CeeEE
Confidence            87      677666543221122333333333 33345421 12346677888899999999999988876554 23455


Q ss_pred             EEEccCCCCCcHHHHHHh-HhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          407 VLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       407 ~~v~~~~~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .|+.+.+.+++..++.+. ++++||.+.+    |.. ++..++++||++.      .+++++++..+.|+++++
T Consensus       312 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~p----g~~f~~~~~~~iRis~~------~~~~~l~~~l~~l~~~l~  375 (378)
T PRK07682        312 AFPSISSTGLSSEEFAEQLLLEEKVAVVP----GSVFGESGEGFIRCSYA------TSLEQLQEAMKRMKRFVE  375 (378)
T ss_pred             EEEeccCCCCCHHHHHHHHHHhCCEEEcC----chhhCcCCCCeEEEEeC------CCHHHHHHHHHHHHHHHh
Confidence            666665445566666655 5688999954    432 1223578999864      246899999998888765

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.94  E-value=4.3e-24  Score=222.31  Aligned_cols=333  Identities=14%  Similarity=0.098  Sum_probs=227.1

Q ss_pred             eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 009673          105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV  184 (529)
Q Consensus       105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~  184 (529)
                      .-++++...+++.|+++|.... ..+           ..++.+.++ .+++.+++++|++++.. +.+.+.+|+.++..+
T Consensus         7 ~~~~pgP~~~~~~~~~a~~~~~-~~~-----------~~~~~~~~~-~~~~~l~~l~~~~~~~~-~i~~~~~gt~~l~~~   72 (368)
T PRK13479          7 LLLTPGPLTTSRTVREAMLRDW-GSW-----------DDDFNALTA-SVRAKLVAIATGEEGYT-CVPLQGSGTFSVEAA   72 (368)
T ss_pred             eeecCCCCCCCHHHHHHhCCCC-CCC-----------ChHHHHHHH-HHHHHHHHHhCCCCCce-EEEEcCCcHHHHHHH
Confidence            3467888889999999987543 111           123445444 56688999999965321 233456788999999


Q ss_pred             HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-CCcEEEEcCCCCC
Q 009673          185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASAYP  263 (529)
Q Consensus       185 l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-~pklIi~~~s~~p  263 (529)
                      +.++..+||+|++.++.+.+.   .+   .......|.  +++.++++ +++.+|++++++.+++. ++++|++.+++|+
T Consensus        73 ~~~l~~~~~~vlv~~~~~~~~---~~---~~~~~~~g~--~~~~i~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~  143 (368)
T PRK13479         73 IGSLVPRDGKVLVPDNGAYGA---RI---AQIAEYLGI--AHVVLDTG-EDEPPDAAEVEAALAADPRITHVALVHCETT  143 (368)
T ss_pred             HHhccCCCCeEEEEeCCchHH---HH---HHHHHHcCC--cEEEEECC-CCCCCCHHHHHHHHHhCCCCcEEEEEcccCc
Confidence            999999999999887543221   00   011233454  45555554 34679999999998752 4567877777666


Q ss_pred             C--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh
Q 009673          264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI  340 (529)
Q Consensus       264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i  340 (529)
                      +  ..|+++|.++|+++|+++++|++|..|....+....   ++|++++|+|||+.||.| |++++++      ++.+.+
T Consensus       144 tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~---~~d~~v~s~~K~l~g~~G~G~l~~~~------~~~~~~  214 (368)
T PRK13479        144 TGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAEL---GIDALISSANKCIEGVPGFGFVIARR------SELEAC  214 (368)
T ss_pred             cccccCHHHHHHHHHHcCCEEEEEcccccCCcccccccc---CceEEEecCccccccCCCceEEEECH------HHHHHh
Confidence            5  789999999999999999999888766432221111   589999999999988888 9999987      444443


Q ss_pred             cccccC----------------CCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHhcCcEEecCCC-
Q 009673          341 NNAVFP----------------GLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGGS-  402 (529)
Q Consensus       341 ~~~~~p----------------~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt-  402 (529)
                      .....+                ....+++...++++..+++.+...+ +++..+++.++++.+.+.|.+.|+.++.+.. 
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~  294 (368)
T PRK13479        215 KGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEI  294 (368)
T ss_pred             hcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchh
Confidence            322111                1112567777888888888665443 5777889999999999999999988764321 


Q ss_pred             CCc-eEEEccC-CCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          403 DNH-LVLVDLR-PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       403 ~~~-~~~v~~~-~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      ... ...+.+. ..+++..++.+.|.+.||.+..+    ..  ...+.+|||+..++    +++|++++++.|++++..
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g----~~--~~~~~iRis~~~~~----t~edi~~~l~~L~~~l~~  363 (368)
T PRK13479        295 QSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPG----KL--TQVDTFRIGCIGDV----DAADIRRLVAAIAEALYW  363 (368)
T ss_pred             cCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecC----CC--CCCCEEEEecCCCC----CHHHHHHHHHHHHHHHHH
Confidence            111 1222222 12356678888898999999543    11  12468999875443    489999999999988753

>PRK07179 hypothetical protein; Provisional

Probab=99.94  E-value=4e-24  Score=225.60  Aligned_cols=326  Identities=18%  Similarity=0.243  Sum_probs=225.1

Q ss_pred             cCCCCC----cHHHHHHHhhhhhccCCCCCC-CCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673          109 ASENFT----SRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE  183 (529)
Q Consensus       109 asen~~----~~~V~eal~~~l~~~y~~G~p-~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~  183 (529)
                      .|.+|+    .|+|++++...+. +|..+.. ...+..|.+...++|    +.+++++|.+.    + +.+++|++||..
T Consensus        60 ~~~~YL~l~~~p~v~~a~~~~~~-~~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~----~-~~~~sG~~An~~  129 (407)
T PRK07179         60 QSNDYLNLSGHPDIIKAQIAALQ-EEGDSLVMSAVFLHDDSPKPQFE----KKLAAFTGFES----C-LLCQSGWAANVG  129 (407)
T ss_pred             ecCCccCCCCCHHHHHHHHHHHH-HhCCCCCccccccCCchHHHHHH----HHHHHHhCCCc----E-EEECCHHHHHHH
Confidence            456664    6899999988875 3422221 234555556666776    67889999875    3 557889999999


Q ss_pred             HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 009673          184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP  263 (529)
Q Consensus       184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p  263 (529)
                      ++.++..+||.|++..+.|.+...        .+...|.  ++++++      ..|+++|++.+++.++++|++.+++++
T Consensus       130 ~l~~l~~~g~~v~~~~~~h~s~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~lV~v~~v~n~  193 (407)
T PRK07179        130 LLQTIADPNTPVYIDFFAHMSLWE--------GVRAAGA--QAHPFR------HNDVDHLRRQIERHGPGIIVVDSVYST  193 (407)
T ss_pred             HHHHhCCCCCEEEEECCcCHHHHH--------HHHHCCC--eEEEec------CCCHHHHHHHHHhcCCeEEEECCCCCC
Confidence            999999999999987765543321        1223343  444432      368999999997645888888877666


Q ss_pred             C--CCCHHHHHHHHHHhCCEEEEecccccccccccc---c-CCCC-CcccEEEecccccccCCCCeEEEeeCCCcchhHH
Q 009673          264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASV---V-ADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVEL  336 (529)
Q Consensus       264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~---~-~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l  336 (529)
                      +  ..|+++|.++|+++|++||+|++|..|......   . ...+ ..+|++++|+||++ |+++|++++++      ++
T Consensus       194 tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~-g~~~G~l~~~~------~~  266 (407)
T PRK07179        194 TGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAF-AGRAGIITCPR------EL  266 (407)
T ss_pred             CCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhh-hccCeEEEeCH------HH
Confidence            5  789999999999999999999999866432110   0 1111 14699999999998 46799999987      56


Q ss_pred             HhhhcccccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCC
Q 009673          337 ESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMG  415 (529)
Q Consensus       337 ~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~  415 (529)
                      .+.+.....++. .+++....++++.++++.+..  ..+..+++.++++++.+.|.+.|+++...   .+++.+.+.. .
T Consensus       267 ~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~--~~~~~~~l~~~~~~l~~~L~~~g~~v~~~---~~i~~l~~~~-~  340 (407)
T PRK07179        267 AEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIES--ADDRRARLHANARFLREGLSELGYNIRSE---SQIIALETGS-E  340 (407)
T ss_pred             HHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCCCC---CCEEEEEeCC-H
Confidence            665544333332 345556667766667776532  24567889999999999999888876632   3455554422 1


Q ss_pred             CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          416 IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       416 i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      .+...+.+.|.++||.++.-..|+.  +..++.|||+++..    ++++|++++++.|++++..
T Consensus       341 ~~~~~~~~~L~~~GI~~~~~~~p~~--~~~~~~lRis~~~~----~t~edi~~~~~~l~~~~~~  398 (407)
T PRK07179        341 RNTEVLRDALEERNVFGAVFCAPAT--PKNRNLIRLSLNAD----LTASDLDRVLEVCREARDE  398 (407)
T ss_pred             HHHHHHHHHHHHCCceEeeecCCCC--CCCCceEEEEECCC----CCHHHHHHHHHHHHHHHHh
Confidence            2345677888899998653223322  22357899998764    4589999999999988764

>PRK07337 aminotransferase; Validated

Probab=99.94  E-value=2.3e-24  Score=226.05  Aligned_cols=339  Identities=14%  Similarity=0.109  Sum_probs=220.7

Q ss_pred             hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673          102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-  178 (529)
Q Consensus       102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-  178 (529)
                      .+.++|..+++.  +++.+.+++...+.+.. .+|+.      .....++++...+++.+.+|...+.  .+|.+++|+ 
T Consensus        30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~~~~~~~~--~~i~~t~G~~  100 (388)
T PRK07337         30 RDIIHMGIGEPDFTAPEPVVEAAARALRRGV-TQYTS------ALGLAPLREAIAAWYARRFGLDVAP--ERIVVTAGAS  100 (388)
T ss_pred             CCEEEeCCcCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHHHHHhCCCCCh--HhEEEecCcH
Confidence            356888777653  57888999887765321 12322      2223456666667777777764322  256667776 


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEE
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA  257 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~  257 (529)
                      +|+..++.+++++||+|++++|.|.++..        .+...|.  +++.++++++ ++.+|++++++.+.+ ++++|++
T Consensus       101 ~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l  169 (388)
T PRK07337        101 AALLLACLALVERGDEVLMPDPSYPCNRH--------FVAAAEG--RPVLVPSGPAERFQLTAADVEAAWGE-RTRGVLL  169 (388)
T ss_pred             HHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEeecCCccCCcCCHHHHHhhcCc-cceEEEE
Confidence            89998999999999999999998865421        2233454  5666667643 578999999999987 8899999


Q ss_pred             cCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-ccc-EEEecccccc--cCCCCeEEEeeC
Q 009673          258 GASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD-VVTTTTHKSL--RGPRGGMIFFKK  328 (529)
Q Consensus       258 ~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aD-iv~~S~hK~l--~GprgG~i~~~~  328 (529)
                      +.|+||+  ..   ++++|.++|+++|+++|+|+++ .++.+.+...+... +.+ +++.|+||.+  +|+|.||+++++
T Consensus       170 ~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~  248 (388)
T PRK07337        170 ASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIY-QGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPE  248 (388)
T ss_pred             ECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccc-cccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecCH
Confidence            8899987  33   4788889999999999999984 44443322112222 233 5678999987  689999999987


Q ss_pred             CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEe-cCCCCCceE
Q 009673          329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV-SGGSDNHLV  407 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~-~~gt~~~~~  407 (529)
                            ++.+++.........+.+...+.+++ .++..-....+++.++++.++++.+.+.|++.|+.+. .+ ..++++
T Consensus       249 ------~l~~~l~~~~~~~~~~~s~~~q~~~~-~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p-~~g~f~  320 (388)
T PRK07337        249 ------ALVGTFEKLAQNLFICASALAQHAAL-ACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMP-DGAFYV  320 (388)
T ss_pred             ------HHHHHHHHHHHHhccCCChHHHHHHH-HHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccCC-CeeEEE
Confidence                  67666654432222223333344332 2343111123466677888889999999988877642 23 345678


Q ss_pred             EEccCCC----CCcHHHHH-HhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPM----GIDGARVE-KILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       408 ~v~~~~~----~i~~~~~~-~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      |++++..    .++..++. ++++++||.+.++...+.  ....+++||++..      .++++++..++|.+++
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~--~~~~~~~Ri~~~~------~~~~l~~~l~rl~~~l  387 (388)
T PRK07337        321 YADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGP--HAPRDYIRLSYAT------SMSRLEEAVARLGKLF  387 (388)
T ss_pred             EEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCC--CCCCCEEEEEecC------CHHHHHHHHHHHHHHh
Confidence            8888532    24555554 557889999954322111  1135789999642      3677777777776543

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.94  E-value=3.4e-24  Score=224.58  Aligned_cols=329  Identities=14%  Similarity=0.101  Sum_probs=213.9

Q ss_pred             ceeEec--CCCCCcHHHHHHHhhhhhccCCCCCCCC-CCCCC---chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673          104 SLELIA--SENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGG---NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG  177 (529)
Q Consensus       104 ~i~L~a--sen~~~~~V~eal~~~l~~~y~~G~p~~-r~~~g---~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG  177 (529)
                      -|+|.+  --.++++++++|+..+.. .+  +.|.. .+..+   .+.+++    +++.+++++|++.    + +.+++|
T Consensus        20 ~~~~~~~~~~~p~~~~~~~a~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~----l~~~lA~~~g~~~----~-~~~~g~   87 (387)
T PRK09331         20 FINLDPIQRGGILTPEARKALIEYGD-GY--SVCDYCPGRLDQIKKPPIAD----FHEDLAEFLGMDE----A-RVTHGA   87 (387)
T ss_pred             ccccChhhcCCCCCHHHHHHHHHHHh-cc--CCCcccccccccccChHHHH----HHHHHHHHhCCCc----E-EEeCCH
Confidence            355544  235789999999988763 22  22211 11111   223344    4478899999975    2 234566


Q ss_pred             HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC-CCCCCCCHHHHHHHhhhc------
Q 009673          178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILF------  250 (529)
Q Consensus       178 s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~-~~~~~iD~d~le~~i~~~------  250 (529)
                      ++++.+++.+++++||+|++..+.|.+.+.        .+...|.  +++.++++ .+++.+|++++++.+++.      
T Consensus        88 t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~--------~~~~~G~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~  157 (387)
T PRK09331         88 REGKFAVMHSLCKKGDYVVLDGLAHYTSYV--------AAERAGL--NVREVPKTGYPEYKITPEAYAEKIEEVKEETGK  157 (387)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCchHHHHH--------HHHHcCC--EEEEEeCccCcCCCcCHHHHHHHHHHhhhccCC
Confidence            699999999999999999998876544321        2334555  66666652 145789999999998753      


Q ss_pred             CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCC-CeEEEee
Q 009673          251 RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPR-GGMIFFK  327 (529)
Q Consensus       251 ~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gpr-gG~i~~~  327 (529)
                      ++++|+++++++++  ..|+++|.++|+++|+++++|++|+.|....+...   .++|++++|+||++++|. +|+++++
T Consensus       158 ~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~---~g~D~~~~s~~K~l~~~~~~G~l~~~  234 (387)
T PRK09331        158 PPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKK---LGADFIVGSGHKSMAASAPSGVLATT  234 (387)
T ss_pred             CCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHH---cCCCEEEeeCcccccCCCCEEEEEEC
Confidence            68999988776654  78999999999999999999999988754322111   158999999999997654 4999998


Q ss_pred             CCCcchhHHHhhhcccccCC-------CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEec
Q 009673          328 KDPVLGVELESAINNAVFPG-------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS  399 (529)
Q Consensus       328 ~~~~~~~~l~~~i~~~~~p~-------~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~  399 (529)
                      +      ++.+.+.....++       +.++.....++++..+++.+.  +..+..++..++++++.+.|.+. |++++.
T Consensus       235 ~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~--~~~~~~~~~~~~~~~l~~~L~~l~g~~~~~  306 (387)
T PRK09331        235 E------EYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVV--ERVKRWDEEVKKARWFVDELEKIEGFKQLG  306 (387)
T ss_pred             H------HHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCEEEec
Confidence            7      5655543321111       111222222333333454432  11233455677888999999997 999884


Q ss_pred             CC-CCCceEEEccC-------CCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673          400 GG-SDNHLVLVDLR-------PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD  471 (529)
Q Consensus       400 ~g-t~~~~~~v~~~-------~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~  471 (529)
                      .. ..+.+..++..       ..+.++..+.+.|.++||..-   .++     ....+|+++     .|.+++|++++++
T Consensus       307 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~---~~~-----~~~i~ri~~-----~g~t~~di~~l~~  373 (387)
T PRK09331        307 EKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGI---KPG-----ATKEFKLST-----YGLTWEQVEYVAD  373 (387)
T ss_pred             cCcCcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEE---ccC-----CceEEEEEe-----ccCCHHHHHHHHH
Confidence            21 22334434432       112234568888988999842   111     234467765     3567899999999


Q ss_pred             HHHHHHH
Q 009673          472 FIHEGVE  478 (529)
Q Consensus       472 ~i~~~~~  478 (529)
                      .|+++++
T Consensus       374 aL~~i~~  380 (387)
T PRK09331        374 AFKEIAE  380 (387)
T ss_pred             HHHHHHH
Confidence            9998765

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.94  E-value=2.2e-24  Score=227.17  Aligned_cols=341  Identities=18%  Similarity=0.188  Sum_probs=228.4

Q ss_pred             eeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCC-CCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC-hHHHH
Q 009673          105 LELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPAN  181 (529)
Q Consensus       105 i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~r~~-~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s-Gs~A~  181 (529)
                      +.|. ++..++++.|++++...+...+  +.|..+.+ .+.. ..+.-+.+++.+++++|+++++    |..++ |++++
T Consensus         5 ~yld~aa~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~r~~la~~~g~~~~~----v~~~~g~t~a~   77 (402)
T TIGR02006         5 IYLDYAATTPVDPRVAEKMMPYLTEKF--GNPASRSHSFGWE-AEEAVENARNQVAELIGADSRE----IVFTSGATESN   77 (402)
T ss_pred             EEeeCCcCCCCCHHHHHHHHHHHHhcC--CCCChhhhHHHHH-HHHHHHHHHHHHHHHhCCCCCe----EEEeCCHHHHH
Confidence            4443 3556889999999988775544  33432211 1111 1233335678899999998753    33444 45898


Q ss_pred             HHHHHhh----cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 009673          182 FEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA  257 (529)
Q Consensus       182 ~~~l~al----l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~  257 (529)
                      ..++.++    .++||+|++.+++|.+......     .+...|.  +++.++++ +++.+|++++++.+++ ++++|++
T Consensus        78 ~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~-----~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~l~~-~~~lv~v  148 (402)
T TIGR02006        78 NLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCR-----YLEREGF--EVTYLPPK-SNGLIDLEELKAAIRD-DTILVSI  148 (402)
T ss_pred             HHHHHHHHHhhcCCCCEEEECCCccHHHHHHHH-----HHHhcCC--EEEEEccC-CCCcCCHHHHHHhcCC-CCEEEEE
Confidence            8887765    3789999999888765432211     1122344  56666665 4678999999999987 7899988


Q ss_pred             cCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchh
Q 009673          258 GASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGV  334 (529)
Q Consensus       258 ~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~  334 (529)
                      .+++|++  ..|+++|.++|+++|+++++|++|+.|.+..+...   .++|++++|+||++ ||.| |+++++++     
T Consensus       149 ~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~---~~~D~~~~s~~K~~-gp~G~G~l~~~~~-----  219 (402)
T TIGR02006       149 MHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNE---LKVDLMSISGHKIY-GPKGIGALYVRRK-----  219 (402)
T ss_pred             ECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCccc---cCCCEEEEehhhhc-CCCceEEEEEccC-----
Confidence            8777665  78999999999999999999999998866433221   16899999999965 7887 99988874     


Q ss_pred             HHHhhhccccc------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCC--CCc
Q 009673          335 ELESAINNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGS--DNH  405 (529)
Q Consensus       335 ~l~~~i~~~~~------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt--~~~  405 (529)
                       ....+.....      ....|+++...++++..+++.+. .+++...++..+.++++.+.|++ .++.+..+..  ..+
T Consensus       220 -~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~  297 (402)
T TIGR02006       220 -PRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAK-EEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPG  297 (402)
T ss_pred             -CCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCC
Confidence             1112221111      12357889999999998998765 46677778888888889998877 4666654311  112


Q ss_pred             eEEEccCCCCCcHHHHHHhHhcCCeEEcCCC--CCCCC------------CCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673          406 LVLVDLRPMGIDGARVEKILDMASITLNKNS--VPGDK------------SALVPGGIRIGSPAMTTRGFSEKEFVAIAD  471 (529)
Q Consensus       406 ~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~--~Pg~~------------~~~~~~~iRig~~~~tt~g~~~~d~~~la~  471 (529)
                      ...+.+.  +++++.+...|.  +|.+..+.  .++..            .....+.||+|+..+||    ++|++++++
T Consensus       298 ~~~v~f~--~~~~~~~~~~l~--~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t----~edid~l~~  369 (402)
T TIGR02006       298 NLNVSFN--YVEGESLIMALK--DLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTT----EEEIDYAVK  369 (402)
T ss_pred             eEEEEEe--CcCHHHHHHhcC--CEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCC----HHHHHHHHH
Confidence            2233343  345566666663  66654332  11110            00124789999988765    899999999


Q ss_pred             HHHHHHHHH
Q 009673          472 FIHEGVEIT  480 (529)
Q Consensus       472 ~i~~~~~~~  480 (529)
                      .|++++...
T Consensus       370 ~l~~~~~~~  378 (402)
T TIGR02006       370 LVKSAIDKL  378 (402)
T ss_pred             HHHHHHHHH
Confidence            999987654

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=99.94  E-value=7.2e-24  Score=230.03  Aligned_cols=361  Identities=15%  Similarity=0.086  Sum_probs=224.8

Q ss_pred             hhhhcccCChHHHHHHHHHHHHh----hcceeEecCCC-----CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHH
Q 009673           79 VDYSLGEADPEVCEIITKEKERQ----FKSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDEL  149 (529)
Q Consensus        79 ~~~~l~~~d~~~~~~~~~e~~~~----~~~i~L~asen-----~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~l  149 (529)
                      ..+++..+.+++...+..+..+.    .+.|+|..++.     .+|+.+++++...+...  .+|+.      .....++
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~--~~Y~~------~~G~~~l  190 (517)
T PRK13355        119 KSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDT--EGYSD------SKGLFSA  190 (517)
T ss_pred             hhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcC--CCCCC------CcChHHH
Confidence            34556666666544332222222    25688887553     24889999988766422  23443      1223455


Q ss_pred             HHHHHHHHHHHcC--CCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEE
Q 009673          150 ETLCQKRALAAFN--LDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES  226 (529)
Q Consensus       150 E~~a~~~la~~~g--~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~  226 (529)
                      .+.+.+++.+..+  ++++    +|.+++|+ +++..++.++++|||+|++++|.|..+.        ..+...|.  ++
T Consensus       191 Reaia~~~~~~~~~~~~~~----~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~--------~~~~~~g~--~~  256 (517)
T PRK13355        191 RKAIMQYAQLKGLPNVDVD----DIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWT--------ACVNLAGG--TA  256 (517)
T ss_pred             HHHHHHHHHhcCCCCCChh----HEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHH--------HHHHHCCC--EE
Confidence            5455556555443  4443    57779988 8999999999999999999999775432        12344564  66


Q ss_pred             EEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673          227 MPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVAD  300 (529)
Q Consensus       227 v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~  300 (529)
                      +.++++++ ++.+|++++++.+++ ++|+|++++|+||+  ..+   +++|.++|++||++||+|++ |..+++.+....
T Consensus       257 v~~~~~~~~~~~~d~~~l~~~~~~-~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~-Y~~~~~~~~~~~  334 (517)
T PRK13355        257 VHYRCDEQSEWYPDIDDIRSKITS-RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEI-YDRLVMDGLEHT  334 (517)
T ss_pred             EEeecCcccCCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehh-hhhhcCCCCCcc
Confidence            77777654 478999999999987 89999999999997  445   78899999999999999998 445554432111


Q ss_pred             CC-C-ccc---EEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHH
Q 009673          301 PF-K-YCD---VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK  373 (529)
Q Consensus       301 ~~-~-~aD---iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~  373 (529)
                      ++ . ..|   ++++|++|++  +|+|.||++++.......++.+.++...... .+.+...+. +...+|..  ...+.
T Consensus       335 s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~q~-a~~~aL~~--~~~~~  410 (517)
T PRK13355        335 SIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNMLANMR-LCSNVPAQS-IVQTALGG--HQSVK  410 (517)
T ss_pred             cHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHHHhcCc-CCcChHHHH-HHHHHhcC--CccHH
Confidence            21 1 123   3458999985  8999999996531100002333332211111 122222233 33334532  11122


Q ss_pred             HH---HHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEEEccCCCC---CcH-HHHHHhHhcCCeEEcCCCCCCCCC-CC
Q 009673          374 VY---QNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMG---IDG-ARVEKILDMASITLNKNSVPGDKS-AL  444 (529)
Q Consensus       374 ~~---~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~~---i~~-~~~~~~L~~~GI~v~~~~~Pg~~~-~~  444 (529)
                      ++   .+++.++++.+.+.|++. |+.+..+ ..++++|+++....   .+. +.+.++|++.||.|.    ||... ..
T Consensus       411 ~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p-~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~----pg~~F~~~  485 (517)
T PRK13355        411 DYLVPGGRVYEQRELVYNALNAIPGISAVKP-KAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIV----QGTGFNWD  485 (517)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCcccCCC-CeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEe----CcchhCCC
Confidence            22   234566778888999885 8877654 23566676764321   123 456788899999994    55431 22


Q ss_pred             CCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          445 VPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       445 ~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .+++|||++.      .+++++++.++.|.+.+.
T Consensus       486 ~~~~~Ris~~------~~~~~l~~a~~rl~~~~~  513 (517)
T PRK13355        486 KPDHFRVVYL------PRLEDLEDAMDRLADFFS  513 (517)
T ss_pred             CcCEEEEEeC------CCHHHHHHHHHHHHHHHH
Confidence            4678999972      357889988888888775

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=99.94  E-value=2.8e-24  Score=221.67  Aligned_cols=319  Identities=19%  Similarity=0.188  Sum_probs=215.4

Q ss_pred             cHHHHHHHhhhhhccCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCC
Q 009673          115 SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD  193 (529)
Q Consensus       115 ~~~V~eal~~~l~~~y~~G~p~~r~~~g-~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD  193 (529)
                      +|+|++++...+. +|..++.+.+++.| ++...++    ++.+++++|.+.     .+.+++|++++.+++.++++|||
T Consensus        17 ~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~l----~~~la~~~~~~~-----~iv~~sg~~a~~~~~~~~~~~gd   86 (349)
T cd06454          17 HPEVIEAAKEALD-KYGVGAGGSRLISGTSDLHEEL----EEELAEFHGKEA-----ALVFSSGYAANDGVLSTLAGKGD   86 (349)
T ss_pred             CHHHHHHHHHHHH-HhCCCCCCcCeecCCchHHHHH----HHHHHHHhCCCC-----EEEeccHHHHHHHHHHHhcCCCC
Confidence            5899999998886 35443333333333 3333444    478889999863     35568999999988899999999


Q ss_pred             EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh----cCCcEEEEcCCCCCC--CCC
Q 009673          194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL----FRPKLIIAGASAYPR--DFD  267 (529)
Q Consensus       194 ~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~----~~pklIi~~~s~~p~--~~d  267 (529)
                      +|++.++.|.+...        .....|.  ++++++      .+|++++++++++    .++++++++++++++  ..|
T Consensus        87 ~Vl~~~~~~~~~~~--------~~~~~g~--~~~~~~------~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~  150 (349)
T cd06454          87 LIISDSLNHASIID--------GIRLSGA--KKRIFK------HNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP  150 (349)
T ss_pred             EEEEehhhhHHHHH--------HHHHcCC--ceEEec------CCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC
Confidence            99999887654321        1223444  444432      3578889988875    357788887666554  789


Q ss_pred             HHHHHHHHHHhCCEEEEeccccccccccccc-----CCCCCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcc
Q 009673          268 YPRMRQIADAVGALLMMDMAHISGLVAASVV-----ADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINN  342 (529)
Q Consensus       268 ~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-----~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~  342 (529)
                      +++|.++|+++|+++|+|++|..|.......     .....+.|++++|+||++. ++||+++.++      ++.+.+..
T Consensus       151 ~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~gG~i~~~~------~~~~~~~~  223 (349)
T cd06454         151 LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFG-AVGGYIAGSK------ELIDYLRS  223 (349)
T ss_pred             HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhc-ccCCEEECCH------HHHHHHHH
Confidence            9999999999999999999987775532110     0011257899999999984 5789998876      56665544


Q ss_pred             cccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHH
Q 009673          343 AVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARV  421 (529)
Q Consensus       343 ~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~  421 (529)
                      ...+.. .++.+...++++..+++....  ++...+++.++++.+.+.|.+.|+.++.+. ...+.++.+ ..+.+.+++
T Consensus       224 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~~~~~~~-~~~~~~~~~  299 (349)
T cd06454         224 YARGFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKELGFPVGGSP-SHIIPPLIG-DDPAKAVAF  299 (349)
T ss_pred             hchhhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccCCC-CCcEEEEeC-CChHHHHHH
Confidence            332222 234455566666677776543  466788899999999999998888766542 223233222 222345778


Q ss_pred             HHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          422 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       422 ~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      .+.|.+.||.+.....+.  .....+.|||+++..    .+++|++++++.|+++
T Consensus       300 ~~~L~~~gI~~~~~~~~~--~~~~~~~iRi~~~~~----~~~~~i~~~~~~l~~~  348 (349)
T cd06454         300 SDALLERGIYVQAIRYPT--VPRGTARLRISLSAA----HTKEDIDRLLEALKEV  348 (349)
T ss_pred             HHHHHhCCceEEEecCCc--cCCCCCeEEEEEeCC----CCHHHHHHHHHHHHHh
Confidence            888877899996532211  112246899998654    3489999999999764

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>PRK09082 methionine aminotransferase; Validated

Probab=99.94  E-value=2.1e-24  Score=226.21  Aligned_cols=358  Identities=13%  Similarity=0.112  Sum_probs=232.0

Q ss_pred             hhcccCChHHHHHHHHHHHHhhcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 009673           81 YSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL  158 (529)
Q Consensus        81 ~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la  158 (529)
                      +++......++..+..... ....|+|..+++.  .++.+.+++...+...+ .+|+.      .....++++...+++.
T Consensus        10 ~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~lr~~~a~~l~   81 (386)
T PRK09082         10 SKLPNVGTTIFTVMSALAA-EHGAINLSQGFPDFDGPPYLVEALAYAMAAGH-NQYPP------MTGVAALREAIAAKTA   81 (386)
T ss_pred             hHhhccCccHHHHHHHHHh-hCCEEEecCCCCCCCCCHHHHHHHHHHHHcCC-CCCCC------CCCcHHHHHHHHHHHH
Confidence            3344444445444433221 2355888776653  46888998887664322 22322      1223456666668888


Q ss_pred             HHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCC
Q 009673          159 AAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL  237 (529)
Q Consensus       159 ~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~  237 (529)
                      +++|.+.+.- .+|.+++|+ +|+..++.++++|||+|++++|.|.++..        .+...|.  +++.++++.+++.
T Consensus        82 ~~~~~~~~~~-~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~  150 (386)
T PRK09082         82 RLYGRQYDAD-SEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAP--------AIELAGG--RAVRVALQPPDFR  150 (386)
T ss_pred             HHhCCCCCCC-CcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEEecCccccc
Confidence            8889864311 146667775 99999999999999999999998765421        2344554  6777777655789


Q ss_pred             CCHHHHHHHhhhcCCcEEEEcCCCCCC--C---CCHHHHHHHHHHhCCEEEEecccccccccccc-cCCCC--C---ccc
Q 009673          238 VDYDMLEKTAILFRPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF--K---YCD  306 (529)
Q Consensus       238 iD~d~le~~i~~~~pklIi~~~s~~p~--~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~~--~---~aD  306 (529)
                      +|++++++.+++ ++++|++++++||+  .   .++++|.++|++||+++|+|++| ..+.+.+. .++..  .   ...
T Consensus       151 ~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y-~~~~~~~~~~~s~~~~~~~~~~~  228 (386)
T PRK09082        151 VDWQRFAAAISP-RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVY-EHIVFDGAGHASVLRHPELRERA  228 (386)
T ss_pred             CCHHHHHHhcCc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhh-hhhccCCCCCCChhhCcCccCcE
Confidence            999999999987 89999998888886  2   46889999999999999999985 34443321 12211  1   234


Q ss_pred             EEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673          307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR  384 (529)
Q Consensus       307 iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~  384 (529)
                      +++.|++|++  +|+|.||+++++      ++.+.+.........+.+...+.+ ++..+.. .....++..+.+.++++
T Consensus       229 i~~~S~SK~~~~~G~RiG~iv~~~------~l~~~~~~~~~~~~~~~~~~~q~~-~~~~l~~-~~~~~~~~~~~~~~~~~  300 (386)
T PRK09082        229 FVVSSFGKTYHVTGWKVGYCVAPA------ALSAEFRKVHQYNTFTVNTPAQLA-LADYLRA-EPEHYLELPAFYQAKRD  300 (386)
T ss_pred             EEEeechhhccchhhhhhhhhCCH------HHHHHHHHHHhhhcCCCChHHHHH-HHHHHhC-ChHHHHHHHHHHHHHHH
Confidence            8889999987  789999999987      666665543211112223333332 2333432 12334667778889999


Q ss_pred             HHHHHHHhcCcEEecCCCCCceEEEccCC-CCCcHHHHHHh-HhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCC
Q 009673          385 ALASRLVELGYKLVSGGSDNHLVLVDLRP-MGIDGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS  462 (529)
Q Consensus       385 ~l~~~L~~~G~~v~~~gt~~~~~~v~~~~-~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~  462 (529)
                      .+.+.|++.|+.+..+ ..++++|++++. .+++..++.+. ++++||.+.++...+. .+...+++||++.      ..
T Consensus       301 ~~~~~L~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~-~~~~~~~~Ri~~~------~~  372 (386)
T PRK09082        301 RFRAALANSRFKLLPC-EGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYA-DPFPHRLVRLCFA------KQ  372 (386)
T ss_pred             HHHHHHHhCCCcccCC-CeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCC-CCCCCCEEEEEec------CC
Confidence            9999999888876554 235667778753 24566677665 5889999954321111 1223578999964      24


Q ss_pred             HHHHHHHHHHHHH
Q 009673          463 EKEFVAIADFIHE  475 (529)
Q Consensus       463 ~~d~~~la~~i~~  475 (529)
                      ++++++..+.|.+
T Consensus       373 ~~~l~~~~~rl~~  385 (386)
T PRK09082        373 EETLDAAAERLCQ  385 (386)
T ss_pred             HHHHHHHHHHHhh
Confidence            6777777776653

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.94  E-value=5.5e-24  Score=221.72  Aligned_cols=330  Identities=16%  Similarity=0.157  Sum_probs=214.6

Q ss_pred             cceeEec--CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCch---hHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673          103 KSLELIA--SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNE---YIDELETLCQKRALAAFNLDENKWGVNVQPLSG  177 (529)
Q Consensus       103 ~~i~L~a--sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~---~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG  177 (529)
                      ..|+|.+  .-..+..++.+++..     |..|+.++|+.+|..   +.+.+++ .++.+++++|++.    +.+ ..+|
T Consensus         7 ~~~~~~~~~~~g~~~~~~~~a~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~-~~e~lA~~~g~~~----~~i-~~g~   75 (370)
T TIGR02539         7 GSINLNPLQRGGVLTEAARKALVE-----FGDGYSVCDFCGGRLDQITKPPIHD-FLEDLAEFLGMDE----ARV-THGA   75 (370)
T ss_pred             cccccChhhhCCCCcHHHHHHHHH-----HhhccccccccccccccccchHHHH-HHHHHHHHhCCCc----eEE-ECCh
Confidence            4566655  234567777777754     444666666544432   1112222 2356899999986    233 4666


Q ss_pred             HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhh------c
Q 009673          178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAIL------F  250 (529)
Q Consensus       178 s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~------~  250 (529)
                      ++++..++.++++|||+|++..++|.+.+.        .+...|.  +++.++.+. .++.+|+++|++.+++      .
T Consensus        76 ~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~  145 (370)
T TIGR02539        76 REGKFAVMHALCKEGDWVVLDGLAHYTSYV--------AAERAGL--NVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGK  145 (370)
T ss_pred             HHHHHHHHHHhhCCCCEEEECCcccHHHHH--------HHHHcCC--EEEEEecCCcccCCcCHHHHHHHHHHhhhccCC
Confidence            699999999999999999998877644321        2344565  555555543 2478999999999864      2


Q ss_pred             CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccC-CCCeEEEee
Q 009673          251 RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG-PRGGMIFFK  327 (529)
Q Consensus       251 ~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~G-prgG~i~~~  327 (529)
                      ++++|+++++++++  ..|+++|.++|+++|+++++|++|..|........   .+.|++++|+||++++ .+.|+++++
T Consensus       146 ~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~---~~~di~v~s~sK~~~~~g~~G~l~~~  222 (370)
T TIGR02539       146 PPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKE---IGADFIVGSGHKSMAASGPCGVLGMS  222 (370)
T ss_pred             CcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHH---cCCCEEEeeCcccccCCCCEEEEEEC
Confidence            67899988777665  78999999999999999999999988743211111   1579999999999853 345999998


Q ss_pred             CCCcchhHHHhhhcccccCCC-------CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC
Q 009673          328 KDPVLGVELESAINNAVFPGL-------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG  400 (529)
Q Consensus       328 ~~~~~~~~l~~~i~~~~~p~~-------~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~  400 (529)
                      +      ++.+.+.....|..       .++......+++..++.... +..+. ..+..++++++.+.|++.|++++..
T Consensus       223 ~------~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~-~~l~~-~~~~~~~~~~l~~~L~~~g~~~~~~  294 (370)
T TIGR02539       223 E------EWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVV-ERVKR-WDEEVKKTRWFVAELEDIGFIQLGQ  294 (370)
T ss_pred             H------HHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHhCCcEEEcc
Confidence            7      67666654332211       12222122333333454321 12222 3344555678999999999987531


Q ss_pred             -CCCCceEEEccCCC-------CCcHHHHHHhHhcCCeE-EcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673          401 -GSDNHLVLVDLRPM-------GIDGARVEKILDMASIT-LNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD  471 (529)
Q Consensus       401 -gt~~~~~~v~~~~~-------~i~~~~~~~~L~~~GI~-v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~  471 (529)
                       ...+++++++++..       ..+...+.+.|.+.||. +.    |+     .++.|||++.     +.+++|++++++
T Consensus       295 ~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir----~~-----~~~~iRis~~-----~~t~e~i~~l~~  360 (370)
T TIGR02539       295 KPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIR----SG-----QTKYFKLSVY-----GLTKEQVEYVVD  360 (370)
T ss_pred             CCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCcccc----CC-----cceEEEEEec-----CCCHHHHHHHHH
Confidence             23466777765321       01234688889889997 42    22     2468999862     357899999999


Q ss_pred             HHHHHHH
Q 009673          472 FIHEGVE  478 (529)
Q Consensus       472 ~i~~~~~  478 (529)
                      .|+++++
T Consensus       361 ~L~~~~~  367 (370)
T TIGR02539       361 SFEEIVE  367 (370)
T ss_pred             HHHHHHH
Confidence            9988764

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>PRK08068 transaminase; Reviewed

Probab=99.94  E-value=9.1e-24  Score=221.57  Aligned_cols=333  Identities=15%  Similarity=0.095  Sum_probs=215.9

Q ss_pred             cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.|+|..++.  .+++.+.+++...+......+|+.      ....+++++...+++.+.+|.+.+. .-+|.+++|+ +
T Consensus        33 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~g~~~lr~aia~~~~~~~g~~~~~-~~~i~it~G~~~  105 (389)
T PRK08068         33 DVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSP------FRGYPFLKEAAADFYKREYGVTLDP-ETEVAILFGGKA  105 (389)
T ss_pred             CeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCC-CccEEEcCCcHH
Confidence            4588876653  245778888877664322123322      1123466666667777777854321 0145567877 8


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      ++..++.++++|||+|++++|.|+.+..        .+...|.  +++.++++++ ++.+|++++++.+.+ ++++|+++
T Consensus       106 ~l~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~i~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~  174 (389)
T PRK08068        106 GLVELPQCLMNPGDTILVPDPGYPDYLS--------GVALARA--QFETMPLIAENNFLPDYTKIPEEVAE-KAKLMYLN  174 (389)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEeecccccCCCCCHHHHHHhccc-cceEEEEE
Confidence            8888899999999999999998765421        2344565  6667777644 468899999998876 89999999


Q ss_pred             CCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC-CC-----cccEEEecccccc--cCCCCeEEE
Q 009673          259 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP-FK-----YCDVVTTTTHKSL--RGPRGGMIF  325 (529)
Q Consensus       259 ~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~-~~-----~aDiv~~S~hK~l--~GprgG~i~  325 (529)
                      +|+||+  ..+   +++|.++|+++|+++|+|+++ ..+.+.+..+.+ +.     ...+++.|++|++  +|.|.||++
T Consensus       175 ~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay-~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~  253 (389)
T PRK08068        175 YPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAY-GAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAV  253 (389)
T ss_pred             CCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhh-hhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEe
Confidence            899997  444   567888899999999999984 333333211111 11     1238889999987  789999999


Q ss_pred             eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc
Q 009673          326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH  405 (529)
Q Consensus       326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~  405 (529)
                      +++      ++.+.+.....+...+.+...+.++. .++.. .....+..++++.++++.+.+.|++.|+.+..+ ..++
T Consensus       254 ~~~------~l~~~l~~~~~~~~~~~~~~~q~~~~-~~l~~-~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~~-~g~~  324 (389)
T PRK08068        254 GNE------SVIEAINLLQDHLFVSLFGAIQDAAI-EALLS-DQSCVAELVARYESRRNAFISACREIGWEVDAP-KGSF  324 (389)
T ss_pred             cCH------HHHHHHHHHHhhccCCCChHHHHHHH-HHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-CeeE
Confidence            887      67777655433322333333333332 23321 113346778888999999999998888876543 2345


Q ss_pred             eEEEccCCCCCcHHHHHHhHh-cCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673          406 LVLVDLRPMGIDGARVEKILD-MASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH  474 (529)
Q Consensus       406 ~~~v~~~~~~i~~~~~~~~L~-~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~  474 (529)
                      ++|+++.. +++..++.+.|. ++||.+..    |.. +...++++||++.      ..++.+++..+.|.
T Consensus       325 ~~~v~~~~-~~~~~~~~~~l~~~~gi~v~p----g~~f~~~~~~~iRi~~~------~~~~~l~~al~~l~  384 (389)
T PRK08068        325 FAWMPVPK-GYTSEQFADLLLEKAHVAVAP----GNGFGEHGEGYVRVGLL------TDEERLREAVERIG  384 (389)
T ss_pred             EEEEECCC-CCCHHHHHHHHHHhCCEEEec----chHhCccCCCeEEEEEc------CCHHHHHHHHHHHH
Confidence            66777753 456677766665 58999954    332 2223578999973      22455555555443

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=99.94  E-value=1.1e-23  Score=220.77  Aligned_cols=333  Identities=16%  Similarity=0.129  Sum_probs=215.8

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.++|..+++.  +++.+.+++...+.......|+.      ....+++.+.+.+++.+.+|.+.+.- -+|.+|+|+ +
T Consensus        32 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~g~~~~~~-~~ii~t~G~~~  104 (385)
T PRK09276         32 DVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPS------YEGMLEFRKAVADWYKRRFGVELDPE-TEVISLIGSKE  104 (385)
T ss_pred             CEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC------CCCcHHHHHHHHHHHHHHhCCCCCCC-CcEEEccCcHH
Confidence            56888877763  57788999887664321112332      11234566666678877778643210 136668887 8


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      ++..++.++++|||+|++++|.|..+..        .....|.  +++.++++.+ ++.+|++++++.+.. ++++|+++
T Consensus       105 ~i~~~~~~~~~~gd~Vl~~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~g~~~d~~~l~~~~~~-~~~~v~l~  173 (385)
T PRK09276        105 GIAHIPLAFVNPGDVVLVPDPGYPVYKI--------GTIFAGG--EPYFMPLKEENGFLPDLDAIPEDVAK-KAKLMFIN  173 (385)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCcChHH--------HHHHcCC--EEEEEecCCCCCCcCCHHHHHHhccc-cceEEEEe
Confidence            9999999999999999999997754321        2234555  6666667544 467899999988876 89999999


Q ss_pred             CCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC---CC---cccEEEecccccc--cCCCCeEEE
Q 009673          259 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK---YCDVVTTTTHKSL--RGPRGGMIF  325 (529)
Q Consensus       259 ~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~~---~aDiv~~S~hK~l--~GprgG~i~  325 (529)
                      +|+||+  ..+   +++|.++|++||++||+|+++. .+.+.+....+   ++   ...+++.|++|.+  +|.|.||++
T Consensus       174 ~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i  252 (385)
T PRK09276        174 YPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYS-EIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAV  252 (385)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchh-heecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeee
Confidence            899997  444   6788889999999999999954 33332211111   11   1247889999986  788999999


Q ss_pred             eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc
Q 009673          326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH  405 (529)
Q Consensus       326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~  405 (529)
                      +++      ++.+.+.........+.+.. ...+...++... ....++..+++.++++.+.+.|++.|+.+..+ ..+.
T Consensus       253 ~~~------~l~~~~~~~~~~~~~~~~~~-~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~  323 (385)
T PRK09276        253 GNA------DLIAGLGKVKSNVDSGVFQA-IQEAGIAALNGP-QEVVEELRKIYQERRDILVEGLRKLGLEVEPP-KATF  323 (385)
T ss_pred             CCH------HHHHHHHHHHhhccCCCCHH-HHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-Ccce
Confidence            887      66666654322111222222 222223344321 12336667778888999999999888876654 2355


Q ss_pred             eEEEccCCCCCcHHHHHHh-HhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673          406 LVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH  474 (529)
Q Consensus       406 ~~~v~~~~~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~  474 (529)
                      ++|+++. .+++..++.+. ++++||.+.    ||.. ....++++||++.      ..++++.+..+.|.
T Consensus       324 ~~~v~~~-~~~~~~~l~~~ll~~~gi~v~----~g~~f~~~~~~~~Ris~~------~~~~~l~~~l~~l~  383 (385)
T PRK09276        324 YVWAPVP-KGYTSAEFATLLLDKAGVVVT----PGNGFGEYGEGYFRIALT------VPDERIEEAVERIK  383 (385)
T ss_pred             EEEEECC-CCCCHHHHHHHHHHhCCEEEC----CchhhCCCCCCeEEEEeC------CCHHHHHHHHHHHh
Confidence            6788775 34566666555 567899994    4433 1223578999864      23566666665554

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.94  E-value=2.2e-24  Score=219.48  Aligned_cols=323  Identities=18%  Similarity=0.185  Sum_probs=227.0

Q ss_pred             CCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-c
Q 009673          111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-L  189 (529)
Q Consensus       111 en~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l  189 (529)
                      ...+....++++...+.+.|-.         ..+++.++|    +.+++++|+.+.     |.+.|||.|+++++.+| +
T Consensus        10 ~p~i~~~e~~~v~~vl~sg~i~---------~G~~v~~FE----~~~ae~~G~k~a-----va~~sgT~AL~laL~al~i   71 (374)
T COG0399          10 RPSIGEEELAAVQEVLKSGWLT---------GGPFVRRFE----QAFAEYLGVKYA-----VAVSSGTAALHLALLALAI   71 (374)
T ss_pred             CCCcchHHHHHHHHHHHcCCee---------cChHHHHHH----HHHHHHhCCCeE-----EEecChHHHHHHHHHhcCC
Confidence            3346677788888888776622         125688888    678999999983     56699999999999977 7


Q ss_pred             CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHH
Q 009673          190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYP  269 (529)
Q Consensus       190 ~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~  269 (529)
                      +|||+|++++.++.+..        +.+...|+  +++.+++|++++.+|++.||+.|++ +||+|+.. .-++...|++
T Consensus        72 g~GDeVI~ps~TfvATa--------n~i~~~Ga--~PVFvDid~~T~nid~~~ie~aIt~-~tKAIipV-hl~G~~~dm~  139 (374)
T COG0399          72 GPGDEVIVPSFTFVATA--------NAVLLVGA--KPVFVDIDPDTLNIDPDLIEAAITP-RTKAIIPV-HLAGQPCDMD  139 (374)
T ss_pred             CCCCEEEecCCchHHHH--------HHHHHcCC--eEEEEecCCcccCCCHHHHHHHccc-CCeEEEEe-hhccCCCCHH
Confidence            99999999998764432        34556676  9999999999999999999999999 89999874 4455678999


Q ss_pred             HHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccc--ccccCCCCeEEEeeCCCcchhHHHhhhcccccCC
Q 009673          270 RMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG  347 (529)
Q Consensus       270 ~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~  347 (529)
                      +|.+||++||++||.|+||+.|..+.|.....  ..|+.++|||  |.++...||+++++++     ++.++++.....|
T Consensus       140 ~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt--~Gd~~~fSF~~~K~ittgEGGav~tnd~-----ela~k~~~lr~hG  212 (374)
T COG0399         140 AIMALAKRHGLPVIEDAAQAHGATYKGKKVGS--FGDIGAFSFHATKNLTTGEGGAVVTNDE-----ELAEKARSLRNHG  212 (374)
T ss_pred             HHHHHHHHcCCeEEEEcchhccCeecCccccc--ccceEEEEecCCCCccccCceEEEeCCH-----HHHHHHHHHHHhC
Confidence            99999999999999999999999887654332  3577777777  9896669999999996     7777765433333


Q ss_pred             CCC-----------C--ChHH-HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecC--C--CCCceEE
Q 009673          348 LQG-----------G--PHNH-TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG--G--SDNHLVL  408 (529)
Q Consensus       348 ~~g-----------~--p~~~-~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~--g--t~~~~~~  408 (529)
                      ...           |  ..+. ..||+.  +.++  +.+++..++..++++.+.+.|++. ++.+...  +  ...|++.
T Consensus       213 ~~~~~~~~y~~~~~G~N~rm~~iqAAig--l~QL--~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~  288 (374)
T COG0399         213 LSRDAVFKYLHEELGYNYRLTEIQAAIG--LAQL--ERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYT  288 (374)
T ss_pred             cCCCccccceeeecccccCHHHHHHHHH--HHHH--HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeE
Confidence            211           1  1122 223322  2232  334566777777888888888874 3444332  2  1234445


Q ss_pred             EccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCC--------------C----CCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673          409 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKS--------------A----LVPGGIRIGSPAMTTRGFSEKEFVAIA  470 (529)
Q Consensus       409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~--------------~----~~~~~iRig~~~~tt~g~~~~d~~~la  470 (529)
                      +-+...+++.+.+.+.|++.||.......|-+..              |    .....+++.+  .  -+++++|+++++
T Consensus       289 i~~~~~~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~--~--p~l~~~~~~~V~  364 (374)
T COG0399         289 ILVDEEGISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPL--H--PNLSEEDVDRVI  364 (374)
T ss_pred             EEecCCCCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccC--C--CCCCHHHHHHHH
Confidence            5454445677889999999987743333342211              0    0112355432  2  258899999999


Q ss_pred             HHHHHHHH
Q 009673          471 DFIHEGVE  478 (529)
Q Consensus       471 ~~i~~~~~  478 (529)
                      +.|.+++.
T Consensus       365 ~~l~~~~~  372 (374)
T COG0399         365 EALKEVLG  372 (374)
T ss_pred             HHHHHHhc
Confidence            99998875

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=99.94  E-value=6.8e-24  Score=222.75  Aligned_cols=334  Identities=19%  Similarity=0.201  Sum_probs=220.5

Q ss_pred             cceeEecCC--CC-CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHH
Q 009673          103 KSLELIASE--NF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP  179 (529)
Q Consensus       103 ~~i~L~ase--n~-~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~  179 (529)
                      +.|+|..++  .+ +++.+++++...+.. +..++++.++..|..   ++.+..++++++++|.+.     +|.+++|++
T Consensus        43 ~~i~l~~~~~~~~~~~~~i~~a~~~~~~~-~~~~~~~~~~~~G~~---~l~~~l~~~la~~~g~~~-----~i~~tsG~~  113 (397)
T PRK06939         43 EVINFCANNYLGLANHPELIAAAKAALDS-HGFGMASVRFICGTQ---DLHKELEEKLAKFLGTED-----AILYSSCFD  113 (397)
T ss_pred             eEEEeeccCccccCCCHHHHHHHHHHHHH-cCCCCcccccccCCc---HHHHHHHHHHHHHhCCCc-----EEEEcChHH
Confidence            457776554  22 688899998877643 333455545444542   233344588899999762     466799999


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---c--CCcE
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---F--RPKL  254 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~---~--~pkl  254 (529)
                      ++..++.++++|||+|++.+|.|.++..        .+...+.  +++.++      .+|++++++.+++   .  ++++
T Consensus       114 a~~~~~~~l~~~gd~vi~~~~~~~~~~~--------~~~~~~~--~~~~~~------~~d~~~l~~~i~~~~~~~~~~~~  177 (397)
T PRK06939        114 ANGGLFETLLGKEDAIISDALNHASIID--------GVRLCKA--KRYRYA------NNDMADLEAQLKEAKEAGARHKL  177 (397)
T ss_pred             HHHHHHHHhCCCCCEEEEEhhhhHHHHH--------HHHhcCC--ceEEeC------CCCHHHHHHHHHhhhccCCCCeE
Confidence            9999999999999999999988765421        2233443  344433      2588999888864   2  5677


Q ss_pred             EEEcCCC--CCCCCCHHHHHHHHHHhCCEEEEecccccccccc-cc--cC-CCC-CcccEEEecccccccCCCCeEEEee
Q 009673          255 IIAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV--VA-DPF-KYCDVVTTTTHKSLRGPRGGMIFFK  327 (529)
Q Consensus       255 Ii~~~s~--~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~~--~~-~~~-~~aDiv~~S~hK~l~GprgG~i~~~  327 (529)
                      |+.+...  .+...++++|.++|++||++||+|++|..|.... +.  .. ..+ +..|++++|+||+++|+|+||++++
T Consensus       178 v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~G~v~~~  257 (397)
T PRK06939        178 IATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASGGYTAGR  257 (397)
T ss_pred             EEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCceEEEeC
Confidence            7776433  3336789999999999999999999986664322 11  00 011 2468999999999988999999998


Q ss_pred             CCCcchhHHHhhhcccccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673          328 KDPVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL  406 (529)
Q Consensus       328 ~~~~~~~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~  406 (529)
                      +      ++.+.+.....+.. .+++.....+++..+++.+.  ..++..+++.++++.+.+.|++.|+++..+  ...+
T Consensus       258 ~------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~  327 (397)
T PRK06939        258 K------EVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLE--ESDELRDRLWENARYFREGMTAAGFTLGPG--EHPI  327 (397)
T ss_pred             H------HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCcCCC--CCCE
Confidence            7      67666654322222 23333334444445666543  235677888999999999999888776543  2233


Q ss_pred             EEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          407 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       407 ~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +.+.+. .+.+..++.+.|.+.||.+.....|.  .+....+||++++..    .+++|++++++.|+++++
T Consensus       328 ~~~~~~-~~~~~~~~~~~L~~~gI~v~~~~~~~--~~~~~~~iRi~~~~~----~~~~~i~~~l~~L~~~~~  392 (397)
T PRK06939        328 IPVMLG-DAKLAQEFADRLLEEGVYVIGFSFPV--VPKGQARIRTQMSAA----HTKEQLDRAIDAFEKVGK  392 (397)
T ss_pred             EEEEEC-CHHHHHHHHHHHHHCCceEeeeCCCC--CCCCCceEEEEECCC----CCHHHHHHHHHHHHHHHH
Confidence            333332 22345667777777799986432221  111246799987654    358999999999988775

>PRK05942 aspartate aminotransferase; Provisional

Probab=99.93  E-value=1.3e-23  Score=220.87  Aligned_cols=319  Identities=15%  Similarity=0.151  Sum_probs=207.5

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.++|..++..  +|+.+++++...+.+....+|+.      .....++++...+++.+.+|.+.+.- -+|.+++|+ +
T Consensus        36 ~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~~~~~~~~-~~i~vt~G~~~  108 (394)
T PRK05942         36 DLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPP------FEGTASFRQAITDWYHRRYGVELDPD-SEALPLLGSKE  108 (394)
T ss_pred             CeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCC------CCCCHHHHHHHHHHHHHHHCCCcCCC-CeEEEccChHH
Confidence            45777655432  45667887766554221123332      22234666666678887778643210 136668887 9


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      |+..++.++++|||+|++++|.|+++..        .+...|.  ++++++++.+ ++.+|++++++.+.+ ++|+|+++
T Consensus       109 al~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~  177 (394)
T PRK05942        109 GLTHLALAYVNPGDVVLVPSPAYPAHFR--------GPLIAGA--QIYPIILKPENDWLIDLSSIPEEVAQ-QAKILYFN  177 (394)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCC--EEEEeecCCccCCccCHHHHHHhccc-cceEEEEc
Confidence            9999999999999999999998876532        1233454  6667777644 467999999998876 89999999


Q ss_pred             CCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC---CC---cccEEEecccccc--cCCCCeEEE
Q 009673          259 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK---YCDVVTTTTHKSL--RGPRGGMIF  325 (529)
Q Consensus       259 ~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~~---~aDiv~~S~hK~l--~GprgG~i~  325 (529)
                      +|+||+  ..+   +++|.++|+++|+++|+|+++. .+.+.+....+   +.   ...+++.|++|.+  +|.|.||++
T Consensus       178 ~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~  256 (394)
T PRK05942        178 YPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYA-ELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVV  256 (394)
T ss_pred             CCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccch-hhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeee
Confidence            899997  444   7888899999999999999854 33332221111   11   2347789999976  788999999


Q ss_pred             eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc
Q 009673          326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH  405 (529)
Q Consensus       326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~  405 (529)
                      +++      ++.+.+.........+.+...+. ++..+++.. ....++.++++.++++.+.+.|.+.|+.+..+ ..+.
T Consensus       257 ~~~------~l~~~l~~~~~~~~~~~~~~~q~-~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~-~~~~  327 (394)
T PRK05942        257 GNR------HIIQGLRTLKTNLDYGIFSALQK-AAETALQLP-DSYLQQVQERYRTRRDFLIQGLGELGWNIPPT-KATM  327 (394)
T ss_pred             cCH------HHHHHHHHHHhhcccCCCHHHHH-HHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC-Ceee
Confidence            987      67776654322111122223233 333445421 22336667778888889999998888876654 2345


Q ss_pred             eEEEccCCCCCcHHHH-HHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccC
Q 009673          406 LVLVDLRPMGIDGARV-EKILDMASITLNKNSVPGDK-SALVPGGIRIGSP  454 (529)
Q Consensus       406 ~~~v~~~~~~i~~~~~-~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~  454 (529)
                      ++|+++.. +++..++ .++|+++||.+.    ||+. +...+++|||++.
T Consensus       328 f~~~~~~~-~~~~~~~~~~~l~~~gV~v~----~g~~f~~~~~~~iRis~~  373 (394)
T PRK05942        328 YLWVPCPV-GMGSTDFALNVLQKTGVVVT----PGNAFGEGGEGYVRISLI  373 (394)
T ss_pred             EEEEECCC-CCCHHHHHHHHHHHCCEEEe----CChhhCcCCCCeEEEEec
Confidence            67777753 4455554 456788999994    4443 1223579999973

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.93  E-value=1.3e-23  Score=217.12  Aligned_cols=326  Identities=16%  Similarity=0.141  Sum_probs=220.3

Q ss_pred             EecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHH
Q 009673          107 LIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT  186 (529)
Q Consensus       107 L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~  186 (529)
                      ++++...+++.|++++..... .+.           ..+.+.++ .+++.+++++|++++.. ..+.+.+|++++..++.
T Consensus         3 ~~p~p~~~~~~~~~~~~~~~~-~~~-----------~~~~~~~~-~~~~~la~~~~~~~~~~-~i~~~~~gt~~l~~~~~   68 (355)
T TIGR03301         3 LTPGPLSTSATVRDAMLVDWC-HWD-----------SEFNDVTD-QVRDRLLALAGGDDNHT-CVLLQGSGTFAVEATIG   68 (355)
T ss_pred             CcCCCCCCCHHHHHHhhhhcc-CCC-----------HHHHHHHH-HHHHHHHHHhcCCCCCc-EEEEeCCcHHHHHHHHH
Confidence            567777889999999986331 111           12333333 45689999999986432 11235678899999999


Q ss_pred             hhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-CCcEEEEcCCCCCC-
Q 009673          187 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASAYPR-  264 (529)
Q Consensus       187 all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-~pklIi~~~s~~p~-  264 (529)
                      +++++||++++.++.+-+.   .+.   ......|.  +++.++++ +++.+|++++++.+++. +++++++.++++++ 
T Consensus        69 ~~~~~~~~vi~~~~~~~~~---~~~---~~a~~~g~--~~~~i~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G  139 (355)
T TIGR03301        69 SLVPRDGKLLVLINGAYGE---RLA---KICEYLGI--PHTDLNFS-EYEPPDLNRIEEALAADPDITHVATVHHETTTG  139 (355)
T ss_pred             hccCCCCeEEEECCCchhh---HHH---HHHHHcCC--ceEEEecC-CCCCCCHHHHHHHHHhCCCceEEEEEecCCccc
Confidence            9999999888766543211   010   11223444  45555554 35789999999998762 34566655555543 


Q ss_pred             -CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh
Q 009673          265 -DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI  340 (529)
Q Consensus       265 -~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i  340 (529)
                       ..|+++|.++|++||+++++|++|+.|....     .+.  ++|++++|+|||+.|+.| |++++++      ++.+.+
T Consensus       140 ~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~-----~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~------~~~~~~  208 (355)
T TIGR03301       140 ILNPLEAIAKVARSHGAVLIVDAMSSFGAIPI-----DIEELDVDALIASANKCLEGVPGFGFVIARR------DLLEAS  208 (355)
T ss_pred             chhHHHHHHHHHHHcCCEEEEEeccccCCccc-----chhhcCccEEEecCCcccccCCceeEEEECH------HHHHHh
Confidence             7799999999999999999999887764321     222  589999999999988777 9999988      444443


Q ss_pred             ccccc----------------CCCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHhcCcEEecCC-C
Q 009673          341 NNAVF----------------PGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGG-S  402 (529)
Q Consensus       341 ~~~~~----------------p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~~G~~v~~~g-t  402 (529)
                      .....                .....+++...+.++..+++.+...+ +++..+++.++++.+.+.|++.|++++.+. .
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~  288 (355)
T TIGR03301       209 AGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERW  288 (355)
T ss_pred             hCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCC
Confidence            31100                01123566677777777887765555 677888899999999999998898866432 2


Q ss_pred             CCc-eEEEccCCC-CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          403 DNH-LVLVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       403 ~~~-~~~v~~~~~-~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      .+. ++++.+... ..+.+++.+.|.+.||.+..+    ..  ...++|||++...+    +++|++++++.|+++
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~----~~--~~~~~iRis~~~~~----~~~~i~~~~~~l~~~  354 (355)
T TIGR03301       289 QSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPG----KL--TLADTFRIGTIGEI----DAADIERLLEAIKDA  354 (355)
T ss_pred             CCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECC----cc--ccccEEEEecCCCC----CHHHHHHHHHHHHhh
Confidence            233 334554321 235567889999999999543    21  11368999975443    489999999999865

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.93  E-value=3.6e-24  Score=221.65  Aligned_cols=300  Identities=19%  Similarity=0.236  Sum_probs=211.7

Q ss_pred             cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCC-CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHH
Q 009673          109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG-GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYT  186 (529)
Q Consensus       109 asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~-g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~  186 (529)
                      ++..++|+.|++++...+.+.+  +.|+.+.+. +....+.++ .+++++++++|++++    +|.+++|+ +++..++.
T Consensus         5 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~----~v~~~~g~t~a~~~~l~   77 (353)
T TIGR03235         5 NATTPIDPAVAEAMLPWLLEEF--GNPSSRTHEFGHNAKKAVE-RARKQVAEALGADTE----EVIFTSGATESNNLAIL   77 (353)
T ss_pred             CCCCCCCHHHHHHHHHHHHhcC--CCCCchhhHHHHHHHHHHH-HHHHHHHHHhCCCCC----eEEEeCCHHHHHHHHHH
Confidence            3456789999999988875544  355543221 223333344 567899999999875    34456664 88888888


Q ss_pred             hhc----CCC-CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 009673          187 AIL----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA  261 (529)
Q Consensus       187 all----~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~  261 (529)
                      ++.    ++| |.|++...+|+++.....     .....|.  +++.++++ +++.+|++++++.+++ ++++|++++++
T Consensus        78 ~l~~~~~~~g~~~vi~~~~~~~s~~~~~~-----~~~~~G~--~v~~v~~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~  148 (353)
T TIGR03235        78 GLARAGEQKGKKHIITSAIEHPAVLEPIR-----ALERNGF--TVTYLPVD-ESGRIDVDELADAIRP-DTLLVSIMHVN  148 (353)
T ss_pred             HHHHhcccCCCCeeeEcccccHHHHHHHH-----HHHhcCC--EEEEEccC-CCCcCCHHHHHHhCCC-CCEEEEEEccc
Confidence            875    366 788888877765432211     1122343  66666666 4578999999999976 78999988777


Q ss_pred             CCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHh
Q 009673          262 YPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES  338 (529)
Q Consensus       262 ~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~  338 (529)
                      |++  ..|+++|.++|+++|+++++|++|+.|.+..+....   ++|++++|+||++ ||.| |+++++++      ...
T Consensus       149 n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~---~~D~~~~s~~K~~-gp~g~g~l~~~~~------~~~  218 (353)
T TIGR03235       149 NETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSAD---RIDLISCSGHKIY-GPKGIGALVIRKR------GKP  218 (353)
T ss_pred             CCceeccCHHHHHHHHHHcCCEEEEEchhhcCCcccccccc---CCCEEEeehhhcC-CCCceEEEEEccC------ccc
Confidence            775  789999999999999999999999988765443221   5899999999985 8887 99999874      211


Q ss_pred             --hhccccc------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEc
Q 009673          339 --AINNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVD  410 (529)
Q Consensus       339 --~i~~~~~------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~  410 (529)
                        .+....+      ....|+++...++++..+++.+. .+.++..+++.++++.+.+.|++.|++++.+.......++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~  297 (353)
T TIGR03235       219 KAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIAR-RNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAETIPHILN  297 (353)
T ss_pred             ccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccccCCEEE
Confidence              1111111      12257888899999999998764 46677888999999999999988999987532212222333


Q ss_pred             cCCCCCcHHHHHHhHhcCCeEEcCCC
Q 009673          411 LRPMGIDGARVEKILDMASITLNKNS  436 (529)
Q Consensus       411 ~~~~~i~~~~~~~~L~~~GI~v~~~~  436 (529)
                      +...+++.+++...|++ +|.+..+.
T Consensus       298 ~~~~~~~~~~v~~~L~~-~i~v~~g~  322 (353)
T TIGR03235       298 FSIDGVNSEALIVNLRA-DAAVSTGS  322 (353)
T ss_pred             EEeCCcCHHHHHHHHhC-CeEEEchh
Confidence            43346778889999976 89986553

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>PRK07683 aminotransferase A; Validated

Probab=99.93  E-value=1.8e-23  Score=219.07  Aligned_cols=336  Identities=13%  Similarity=0.135  Sum_probs=221.0

Q ss_pred             cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      ..++|..+++  +.++.+.+++...+.+.+ .+|+.      .....++++...+++.+.+|+..+. ..+|.+++|+ +
T Consensus        29 ~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~l~~~~g~~~~~-~~~I~~t~G~~~  100 (387)
T PRK07683         29 NLISLTIGQPDFPTPSHVKEAAKRAITENY-TSYTH------NAGLLELRKAACNFVKDKYDLHYSP-ESEIIVTIGASE  100 (387)
T ss_pred             CeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHHHHHhCCCCCC-CCcEEEeCChHH
Confidence            5588877664  346788899887775432 12322      1223466666667777666764221 0145667776 9


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      |+..++.+++++||+|++++|.+.++.        ..+...|.  ++++++++.+++.+|.+++++.+++ ++++|++++
T Consensus       101 al~~~~~~l~~~gd~Vl~~~p~y~~~~--------~~~~~~g~--~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~i~i~~  169 (387)
T PRK07683        101 AIDIAFRTILEPGTEVILPAPIYPGYE--------PIIRLCGA--KPVFIDTRSTGFRLTAEALENAITE-KTRCVVLPY  169 (387)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCccchH--------HHHHHcCC--EEEEeecCcccCCCCHHHHHHhcCc-CceEEEEeC
Confidence            999999999999999999998765432        12334554  6777777756678899999999877 899999999


Q ss_pred             CCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC-C-----cccEEEecccccc--cCCCCeEEEe
Q 009673          260 SAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K-----YCDVVTTTTHKSL--RGPRGGMIFF  326 (529)
Q Consensus       260 s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-~-----~aDiv~~S~hK~l--~GprgG~i~~  326 (529)
                      ++||+  ..   ++++|.++|+++|+++|+|+++. .+.+.+.. .++ .     .-.+++.|++|.+  +|.|.||+++
T Consensus       170 p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~-~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~  247 (387)
T PRK07683        170 PSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYS-ELVYEQPH-TSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFA  247 (387)
T ss_pred             CCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccc-cceeCCCc-CChhhccCCcCCeEEEeeccccccCccceeEEEEc
Confidence            99987  33   48889999999999999999854 33333211 121 1     1248889999987  7889999999


Q ss_pred             eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673          327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL  406 (529)
Q Consensus       327 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~  406 (529)
                      ++      ++.+++.........+.+...+.++ ...+..- ....+..++++.++++.+.+.|.+.|+.+..+ ..+++
T Consensus       248 ~~------~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~  318 (387)
T PRK07683        248 PS------YLAKHILKVHQYNVTCASSISQYAA-LEALTAG-KDDAKMMRHQYKKRRDYVYNRLISMGLDVEKP-TGAFY  318 (387)
T ss_pred             CH------HHHHHHHHHHHhccCCCChHHHHHH-HHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC-CeeEE
Confidence            87      6666654322111112222322222 2234321 12235566777888999999998888776544 23455


Q ss_pred             EEEccCCCCCcHHHH-HHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          407 VLVDLRPMGIDGARV-EKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       407 ~~v~~~~~~i~~~~~-~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .|+.+...+++..++ ..+|+++||.+.    ||.. +...++++||++.      .+++++++..++|.+++.
T Consensus       319 ~~~~~~~~~~~~~~~~~~ll~~~gI~v~----pg~~f~~~~~~~~Ri~~~------~~~~~~~~al~~l~~~l~  382 (387)
T PRK07683        319 LFPSIGHFTMSSFDFALDLVEEAGLAVV----PGSAFSEYGEGYVRLSYA------YSIETLKEGLDRLEAFLQ  382 (387)
T ss_pred             EEEecccCCCCHHHHHHHHHHhCCEEEc----CchhhCCCCCCeEEEEec------CCHHHHHHHHHHHHHHHH
Confidence            566665434555454 456788999994    4433 2234679999874      347888888888887765

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=99.93  E-value=3e-23  Score=217.73  Aligned_cols=338  Identities=17%  Similarity=0.174  Sum_probs=220.7

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      ..|+|..+++.  +++.+.+++...+...+. .|+      .....+++++.+.+++...+|+..+.. .+|.+++|+ +
T Consensus        31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~------~~~g~~~lr~~ia~~~~~~~~~~~~~~-~~i~it~G~~~  102 (391)
T PRK07309         31 GILKLTLGEPDFTTPDHVKEAAKRAIDANQS-HYT------GMAGLLELRQAAADFVKEKYNLDYAPE-NEILVTIGATE  102 (391)
T ss_pred             CeEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-CCC------CCCCcHHHHHHHHHHHHHHhCCCCCCC-CcEEEeCChHH
Confidence            56777766653  467788888866643221 222      222245677777788877777743211 246667876 9


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEE
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIA  257 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~  257 (529)
                      |+.+++.++++|||+|++.+|.|+++..        .....|.  +++.++.+++++.+|++++++.++..  ++++|++
T Consensus       103 al~~~~~~~~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l  172 (391)
T PRK07309        103 ALSASLTAILEPGDKVLLPAPAYPGYEP--------IVNLVGA--EIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVIL  172 (391)
T ss_pred             HHHHHHHHhcCCCCEEEEeCCCCcchHH--------HHHHcCC--EEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEE
Confidence            9999999999999999999998766421        2334554  56666666445789999999988642  5789999


Q ss_pred             cCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC-C---cccEEEecccccc--cCCCCeEEEe
Q 009673          258 GASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K---YCDVVTTTTHKSL--RGPRGGMIFF  326 (529)
Q Consensus       258 ~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-~---~aDiv~~S~hK~l--~GprgG~i~~  326 (529)
                      ++|+||+  ..   ++++|.++|++||+++|+|+++ ..+.+.+....++ .   .-.+++.|+||.+  +|.|.||+++
T Consensus       173 ~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~  251 (391)
T PRK07309        173 NYPANPTGVTYSREQIKALADVLKKYDIFVISDEVY-SELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFA  251 (391)
T ss_pred             ECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccc-cceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEe
Confidence            8888887  33   4889999999999999999984 4444432211121 1   1227889999986  7899999999


Q ss_pred             eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673          327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL  406 (529)
Q Consensus       327 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~  406 (529)
                      ++      ++.+++.... +....+++.....++..+++.. ........+++.++++.+.+.|++.|+.+..+. .+.+
T Consensus       252 ~~------~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~-gg~~  322 (391)
T PRK07309        252 PA------EFTAQLIKSH-QYLVTAATTMAQFAAVEALTNG-KDDALPMKKEYIKRRDYIIEKMTDLGFKIIKPD-GAFY  322 (391)
T ss_pred             CH------HHHHHHHHHH-hhcccCCChHHHHHHHHHHhCC-hhHHHHHHHHHHHHHHHHHHHHHHCCCeecCCC-eeEE
Confidence            87      6766665432 1111122222233333344321 112245567778888899999988888776542 2455


Q ss_pred             EEEccCCC-CCcHHHHH-HhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          407 VLVDLRPM-GIDGARVE-KILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       407 ~~v~~~~~-~i~~~~~~-~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +|+.+... ..+..++. ++++++||.+.    ||.. ++..+++|||++..      .++++++..+.|++++.
T Consensus       323 ~~~~l~~~~~~~~~~~~~~l~~~~gv~v~----pg~~f~~~~~~~iRi~~~~------~~~~l~~~i~~l~~~~~  387 (391)
T PRK07309        323 IFAKIPAGYNQDSFKFLQDFARKKAVAFI----PGAAFGPYGEGYVRLSYAA------SMETIKEAMKRLKEYME  387 (391)
T ss_pred             EEEECCCCCCCCHHHHHHHHHHhCCEEEe----CchhhCCCCCCEEEEEecC------CHHHHHHHHHHHHHHHH
Confidence            66666431 12445555 55678999994    5543 23346799998652      36788888888877664

>PRK08912 hypothetical protein; Provisional

Probab=99.93  E-value=2e-23  Score=218.80  Aligned_cols=359  Identities=15%  Similarity=0.127  Sum_probs=228.2

Q ss_pred             cccCChHHHHHHHHHHHHhhcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673           83 LGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA  160 (529)
Q Consensus        83 l~~~d~~~~~~~~~e~~~~~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~  160 (529)
                      +....+..+..+.+... ....++|..+..  ..|+.+.+++...+.+.. .+|+.      .....++++...+++.+.
T Consensus         8 ~~~~~~~~~~~~~~~~~-~~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~-~~Y~~------~~G~~~lr~~ia~~~~~~   79 (387)
T PRK08912          8 FADLPTTIFEVMSQLAR-EHGAINLGQGFPDDPGPEDVRRAAADALLDGS-NQYPP------MMGLPELRQAVAAHYARF   79 (387)
T ss_pred             HhhCCCCHHHHHHHHHh-hCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCcHHHHHHHHHHHHHH
Confidence            43444444443433222 134577765543  346778888766554322 22332      122346666666788877


Q ss_pred             cCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCC
Q 009673          161 FNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD  239 (529)
Q Consensus       161 ~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD  239 (529)
                      +|.+.+.. .+|.+++|+ +|+..++.++++|||+|++++|.|.++..        .+...|.  +++.++++++++.+|
T Consensus        80 ~g~~~~~~-~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~  148 (387)
T PRK08912         80 QGLDLDPE-TEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLP--------LIRRAGG--VPRLVRLEPPHWRLP  148 (387)
T ss_pred             hCCCCCCc-ccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEEecCcccCcCC
Confidence            78653321 256667776 89988999999999999999998764421        2334554  666666765568899


Q ss_pred             HHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC---C---CcccEE
Q 009673          240 YDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---F---KYCDVV  308 (529)
Q Consensus       240 ~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~---~~aDiv  308 (529)
                      ++++++.+.. ++|+|++++++||+  ..+   +++|.++|++||+++|+|+++. .+.+.+....+   +   ...+++
T Consensus       149 ~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~  226 (387)
T PRK08912        149 RAALAAAFSP-RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWE-HVVFDGRRHIPLMTLPGMRERTVK  226 (387)
T ss_pred             HHHHHHHhCc-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhh-hcccCCCCCcChhhCCCccCceEE
Confidence            9999999877 88999999999997  444   7778999999999999999854 33333211111   1   124589


Q ss_pred             Eecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 009673          309 TTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL  386 (529)
Q Consensus       309 ~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l  386 (529)
                      ++|+||.+  +|.|.||+++++      ++.+.+.........+.+...+. ++..++.. ....+++..+++.++++.+
T Consensus       227 ~~S~SK~~g~~GlRiG~~~~~~------~~~~~l~~~~~~~~~~~~~~~q~-~~~~~l~~-~~~~~~~~~~~~~~~~~~l  298 (387)
T PRK08912        227 IGSAGKIFSLTGWKVGFVCAAP------PLLRVLAKAHQFLTFTTPPNLQA-AVAYGLGK-PDDYFEGMRADLARSRDRL  298 (387)
T ss_pred             EeechhhccCcCceeEEEecCH------HHHHHHHHHHhhccccCChHHHH-HHHHHHhC-CHHHHHHHHHHHHHHHHHH
Confidence            99999986  788899999987      66666544322211222222222 22334431 1122366778888999999


Q ss_pred             HHHHHhcCcEEecCCCCCceEEEccCCCC--CcHHHHHHh-HhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCH
Q 009673          387 ASRLVELGYKLVSGGSDNHLVLVDLRPMG--IDGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSE  463 (529)
Q Consensus       387 ~~~L~~~G~~v~~~gt~~~~~~v~~~~~~--i~~~~~~~~-L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~  463 (529)
                      .+.|++.|+.+..+ ..++++|+++...+  .+..++.+. ++++||.+..+...+.. ...++++||++..      .+
T Consensus       299 ~~~L~~~g~~~~~~-~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~-~~~~~~iRl~~~~------~~  370 (387)
T PRK08912        299 AAGLRRIGFPVLPS-QGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEE-DPVTSVVRFCFAK------RD  370 (387)
T ss_pred             HHHHHhCCCcccCC-CcceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCC-CCCCCEEEEEEeC------CH
Confidence            99999988876654 23566777875422  355555555 57899999543211111 1135789999752      36


Q ss_pred             HHHHHHHHHHHHHHH
Q 009673          464 KEFVAIADFIHEGVE  478 (529)
Q Consensus       464 ~d~~~la~~i~~~~~  478 (529)
                      +++++..+.|.++++
T Consensus       371 ~~l~~~l~rl~~~l~  385 (387)
T PRK08912        371 ATLDEAVERLAAARR  385 (387)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            888888888877654

>TIGR01814 kynureninase kynureninase

Probab=99.93  E-value=7.8e-24  Score=223.29  Aligned_cols=338  Identities=15%  Similarity=0.084  Sum_probs=219.9

Q ss_pred             cceeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHH
Q 009673          103 KSLELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN  181 (529)
Q Consensus       103 ~~i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~  181 (529)
                      +.+.|. .+-.++|+.|.+++..++. .|..+..+.++.+...+....+ .. +.+ +++|++++++   +...++|+++
T Consensus        27 ~~iyld~~a~g~~p~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~-~~~-~l~g~~~~~v---~~~~~~t~~l   99 (406)
T TIGR01814        27 AVIYLDGNSLGLMPKAARNALKEELD-KWAKIAIRGHNTGKAPWFTLDE-SL-LKL-RLVGAKEDEV---VVMNTLTINL   99 (406)
T ss_pred             CcEEecCCCcCcCcHHHHHHHHHHHH-HHHHhhhccCccCCCChhhhhh-hh-ccc-cccCCCCCcE---EEeCCchHHH
Confidence            457776 4555779999999987664 3322211112221122222222 22 334 8999987642   3334455888


Q ss_pred             HHHHHhhcCCCC---EEEEcCCCCCccccccccccccccccccceEE--EEEcccCCCCCCCCHHHHHHHhhh--cCCcE
Q 009673          182 FEVYTAILKPHD---RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE--SMPYRLDESTGLVDYDMLEKTAIL--FRPKL  254 (529)
Q Consensus       182 ~~~l~all~pGD---~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~--~v~~~v~~~~~~iD~d~le~~i~~--~~pkl  254 (529)
                      ..++.++++||+   .|++.+.+|++.+....    ......|..+.  .+.++.+ +++.+|++++++.++.  .++++
T Consensus       100 ~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~----~~~~~~g~~~~~~~~~~~~~-~~g~~~~~~l~~~~~~~~~~t~l  174 (406)
T TIGR01814       100 HLLLASFYKPTPKRYKILLEAKAFPSDHYAIE----SQLQLHGLTVEESMVQIEPR-EEETLRLEDILDTIEKNGDDIAV  174 (406)
T ss_pred             HHHHHHhcCCcCCccEEEecCCCCChHHHHHH----HHHHhcCCCcccceEEeccC-CCCccCHHHHHHHHHhcCCCeEE
Confidence            888888877753   57766677765321110    01122343221  1333333 3478899999888752  27888


Q ss_pred             EEEcCCCCC--CCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCeEEEeeCCCcc
Q 009673          255 IIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVL  332 (529)
Q Consensus       255 Ii~~~s~~p--~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~  332 (529)
                      |++.+.++.  ...|+++|.++|+++|+++++|++|+.|.+..++...   ++|++++|+||||.||.||.+++.++   
T Consensus       175 v~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~---gvD~~~~s~hK~l~g~pG~~l~v~~~---  248 (406)
T TIGR01814       175 ILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDW---GVDFACWCTYKYLNAGPGAGAFVHEK---  248 (406)
T ss_pred             EEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccC---CCCEEEEcCccccCCCCCeEEEEehh---
Confidence            888765544  3889999999999999999999999999875543222   68999999999997666766666553   


Q ss_pred             hhHHHhhhccc----------------------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 009673          333 GVELESAINNA----------------------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL  390 (529)
Q Consensus       333 ~~~l~~~i~~~----------------------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L  390 (529)
                        .+. .+...                      ......|+|+...++++..+++.+...+.+...++....++++.+.|
T Consensus       249 --~~~-~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l  325 (406)
T TIGR01814       249 --HAH-TERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELI  325 (406)
T ss_pred             --hhh-hcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence              111 11000                      00012478999999999999998876777888888888899999988


Q ss_pred             Hhc-----CcEEecCCC---CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEcc-CCCccCCC
Q 009673          391 VEL-----GYKLVSGGS---DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS-PAMTTRGF  461 (529)
Q Consensus       391 ~~~-----G~~v~~~gt---~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~-~~~tt~g~  461 (529)
                      .+.     |++++.+..   ...++.+.+.   ++++++.+.|.++||.+...         .++.||||. +.+||   
T Consensus       326 ~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~---~~~~~~~~~L~~~gi~v~~~---------~~~~iRiS~~~~~nt---  390 (406)
T TIGR01814       326 KARCGGPPVLTIITPRDHAQRGCQLSLTHP---VPGKAVFQALIKRGVIGDKR---------EPSVIRVAPVPLYNT---  390 (406)
T ss_pred             HhhcCCCCceEEeCCCChhhcCCeEEEEec---CCHHHHHHHHHHCCEEEecc---------CCCeEEEechhccCC---
Confidence            773     477776421   1223334432   35778888898999988421         246899998 55654   


Q ss_pred             CHHHHHHHHHHHHHHH
Q 009673          462 SEKEFVAIADFIHEGV  477 (529)
Q Consensus       462 ~~~d~~~la~~i~~~~  477 (529)
                       ++|++++++.|++++
T Consensus       391 -~~did~l~~~l~~~~  405 (406)
T TIGR01814       391 -FVDVYDAVNVLEEIL  405 (406)
T ss_pred             -HHHHHHHHHHHHHHh
Confidence             899999999998754

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.93  E-value=1.3e-23  Score=222.77  Aligned_cols=345  Identities=14%  Similarity=0.086  Sum_probs=221.9

Q ss_pred             cceeEecCCC------CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC
Q 009673          103 KSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS  176 (529)
Q Consensus       103 ~~i~L~asen------~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s  176 (529)
                      +.|+|..++.      .+++.+.+++...+......+|+.      .....++++.+.+++.+.+|.+.+.  -+|.+|+
T Consensus        53 ~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~~~~~~~--~~v~it~  124 (430)
T PLN00145         53 PVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYST------CVGLLPARRAIAEYLSRDLPYELST--DDIYLTA  124 (430)
T ss_pred             CeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCC------CccCHHHHHHHHHHHhhccCCCCCh--hhEEEeC
Confidence            5678876654      357899999988775432223432      1223456655556666655554322  2566788


Q ss_pred             hH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcE
Q 009673          177 GS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKL  254 (529)
Q Consensus       177 Gs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pkl  254 (529)
                      |+ +|+..++.++++|||+|++++|.|..+..        ...+.|.  +++.+++.++ ++.+|++++++++++ ++++
T Consensus       125 G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~  193 (430)
T PLN00145        125 GCAQAIEIIMSVLAQPGANILLPRPGYPLYEA--------RAVFSGL--EVRHFDLLPERGWEVDLEGVEALADE-NTVA  193 (430)
T ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHcCC--EEEEeeCCcccCCcCCHHHHHHHhCc-CceE
Confidence            86 99999999999999999999997754321        2234454  5566665433 578999999999887 8899


Q ss_pred             EEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---Cc--ccEEEeccccc--ccCCCCe
Q 009673          255 IIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY--CDVVTTTTHKS--LRGPRGG  322 (529)
Q Consensus       255 Ii~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~~--aDiv~~S~hK~--l~GprgG  322 (529)
                      |++++|+||+  ..+   +++|.++|+++|++||+|++ |..+++.+....++   ..  .-++++|++|.  ++|+|.|
T Consensus       194 i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~-Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG  272 (430)
T PLN00145        194 MVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEV-YDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLG  272 (430)
T ss_pred             EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEecc-chhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEE
Confidence            9999999997  454   77888999999999999998 45555433211122   11  22788999998  4899999


Q ss_pred             EEEeeCCCcch--hHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEec
Q 009673          323 MIFFKKDPVLG--VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS  399 (529)
Q Consensus       323 ~i~~~~~~~~~--~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~  399 (529)
                      |++.+++....  .++.+.+....  .....++....+++..+|+.-....+++.+++++++++.+.+.|++. |+.+..
T Consensus       273 ~iv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~  350 (430)
T PLN00145        273 WIATCDPNGILKETKVVDSIRNYL--NISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPH  350 (430)
T ss_pred             EEEEecchhhhhhhHHHHHHHHHh--cccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence            99985321000  01122333221  11112222233333334543112335778888999999999999884 776532


Q ss_pred             CCCCCceEEEccCCC---CC-cH-HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673          400 GGSDNHLVLVDLRPM---GI-DG-ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH  474 (529)
Q Consensus       400 ~gt~~~~~~v~~~~~---~i-~~-~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~  474 (529)
                      ......++|+++...   ++ +. +.+.++|++.||.+    .||.... .++++||++.      ..++++++..+.|.
T Consensus       351 ~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v----~pG~~fg-~~~~lRis~~------~~~~~l~~al~rl~  419 (430)
T PLN00145        351 KPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVV----LPGSALG-MKNWLRITFA------IDPPSLEDGLERLK  419 (430)
T ss_pred             CCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEE----eCccccC-CCCeEEEEeC------CCHHHHHHHHHHHH
Confidence            223456778776421   22 33 34567888999999    4554321 2589999964      24788888888888


Q ss_pred             HHHHHH
Q 009673          475 EGVEIT  480 (529)
Q Consensus       475 ~~~~~~  480 (529)
                      +.+...
T Consensus       420 ~~~~~~  425 (430)
T PLN00145        420 SFCLRH  425 (430)
T ss_pred             HHHHHh
Confidence            877654

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=99.93  E-value=1.2e-23  Score=217.55  Aligned_cols=327  Identities=20%  Similarity=0.200  Sum_probs=217.6

Q ss_pred             cceeEecCCC---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673          103 KSLELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS  178 (529)
Q Consensus       103 ~~i~L~asen---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs  178 (529)
                      +.|+|..+++   ..++.+++++...+. +|..++.+.++..|. +..++++    +.+++++|.+.     +|.+++|+
T Consensus        17 ~~id~~~~~~~g~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~~~~~-----~i~~~~G~   86 (360)
T TIGR00858        17 RLLNFSSNDYLGLASHPEVIQAAQQGAE-QYGAGSTASRLVSGNSPLHEELE----EELAEWKGTEA-----ALLFSSGY   86 (360)
T ss_pred             eEEecccCCcccCCCCHHHHHHHHHHHH-hcCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCC-----EEEECchH
Confidence            4577777643   245899999988773 455555443333332 3334444    77788888543     56679999


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc---CCcEE
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLI  255 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~---~pklI  255 (529)
                      +++..++.++++|||+|++.++.|.....        .+...|.  +++.++      .+|++++++.++..   ++++|
T Consensus        87 ~~~~~~l~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~~~~~~~~~~~~v  150 (360)
T TIGR00858        87 LANVGVISALVGKGDLILSDALNHASLID--------GCRLSGA--RVRRYR------HNDVEHLERLLEKNRGERRKLI  150 (360)
T ss_pred             HHHHHHHHHhCCCCCEEEEEccccHHHHH--------HHHhcCC--ceEEec------CCCHHHHHHHHHHcccCCCeEE
Confidence            88888888889999999999887654421        2233443  333332      36899999988753   46778


Q ss_pred             EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccccccccc---C-CCC--CcccEEEecccccccCCCCeEEEee
Q 009673          256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV---A-DPF--KYCDVVTTTTHKSLRGPRGGMIFFK  327 (529)
Q Consensus       256 i~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~---~-~~~--~~aDiv~~S~hK~l~GprgG~i~~~  327 (529)
                      +++.+++++  ..|+++|.++|+++|+++|+|++|..|.......   . ..+  ...+++++|+||+| |++|||++++
T Consensus       151 ~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~gG~~~~~  229 (360)
T TIGR00858       151 VTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKAL-GSYGAYVAGS  229 (360)
T ss_pred             EEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhh-hccCcEEEcC
Confidence            877665544  6799999999999999999999987664422100   0 111  14679999999998 5578999988


Q ss_pred             CCCcchhHHHhhhcccccCC-CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673          328 KDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL  406 (529)
Q Consensus       328 ~~~~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~  406 (529)
                      +      ++.+.+.....+. ..++++...++++..+++...  ..+...+++.++++.+.+.|.+.|+.+..+  ...+
T Consensus       230 ~------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~  299 (360)
T TIGR00858       230 Q------ALIDYLINRARTLIFSTALPPAVAAAALAALELIQ--EEPWRREKLLALIARLRAGLEALGFTLMPS--CTPI  299 (360)
T ss_pred             H------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHHHcCCccCCC--CCCE
Confidence            7      6666654332222 223344455555556676443  224567889999999999999888776643  2446


Q ss_pred             EEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673          407 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI  473 (529)
Q Consensus       407 ~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i  473 (529)
                      +++.+.. ..+..++.+.|.++||.+.....++.  +..++++||+++..+    +++|++++++.|
T Consensus       300 ~~~~~~~-~~~~~~~~~~l~~~gI~v~~~~~~~~--~~~~~~iRis~~~~~----~~~~i~~~l~~l  359 (360)
T TIGR00858       300 VPVIIGD-NASALALAEELQQQGIFVGAIRPPTV--PAGTSRLRLTLSAAH----TPGDIDRLAEAL  359 (360)
T ss_pred             EEEEeCC-HHHHHHHHHHHHHCCeeEeeeCCCCC--CCCCceEEEEEcCCC----CHHHHHHHHHhh
Confidence            6666542 23456788888889999964322221  112458999987654    479999998876

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>PRK07550 hypothetical protein; Provisional

Probab=99.93  E-value=5.7e-23  Score=215.33  Aligned_cols=334  Identities=15%  Similarity=0.078  Sum_probs=218.5

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      ..++|..+++.  +++.+.+++.+.+.+.....|      +......++++.+.+++.+.+|.....  -+|.+++|+ +
T Consensus        30 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y------~~~~G~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~~~  101 (386)
T PRK07550         30 PLIDLSQAVPGYPPPPELLRALAEAAADPAAHLY------GPVEGLPELREAYAAHYSRLYGAAISP--EQVHITSGCNQ  101 (386)
T ss_pred             CeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCC------CCCCCCHHHHHHHHHHHHHHhCCCCCc--ceEEEecCcHH
Confidence            45788777753  467888888776532211122      211223467766778888887865322  256678886 8


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      |+..++.++++|||+|++++|.|.++..        .+...|.  ++++++++++ ++.+|++++++.+++ ++++|++.
T Consensus       102 al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~~~~~l~~~~~~-~~~~v~~~  170 (386)
T PRK07550        102 AFWAAMVTLAGAGDEVILPLPWYFNHKM--------WLDMLGI--RPVYLPCDEGPGLLPDPAAAEALITP-RTRAIALV  170 (386)
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEEecCCCcCCCCCHHHHHHHhcc-cCcEEEEe
Confidence            9999999999999999999998765421        2234454  6777777643 567899999999987 89998888


Q ss_pred             CCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCC-CCC----c-ccEEEecccccc--cCCCCeEEE
Q 009673          259 ASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD-PFK----Y-CDVVTTTTHKSL--RGPRGGMIF  325 (529)
Q Consensus       259 ~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~-~~~----~-aDiv~~S~hK~l--~GprgG~i~  325 (529)
                      .|+||+  ..   ++++|.++|+++|+++|+|+++. ++...+..+. .+.    + -.+++.|++|++  +|.|.||++
T Consensus       171 ~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~  249 (386)
T PRK07550        171 TPNNPTGVVYPPELLHELYDLARRHGIALILDETYR-DFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVV  249 (386)
T ss_pred             CCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccch-hhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeee
Confidence            888887  33   37899999999999999999853 4332221111 111    1 136789999987  588999999


Q ss_pred             eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCC
Q 009673          326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDN  404 (529)
Q Consensus       326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~  404 (529)
                      +++      ++.+.+.........+.+...+. +++.++... ....++.++++.++++.+.+.|.+. ++.+...  ..
T Consensus       250 ~~~------~~~~~~~~~~~~~~~~~s~~~q~-~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--g~  319 (386)
T PRK07550        250 ASP------ARIAEIEKFMDTVAICAPRIGQI-AVAWGLPNL-ADWRAGNRAEIARRRDAFRAVFARLPGWELLAS--GA  319 (386)
T ss_pred             cCH------HHHHHHHHHHhhcccCCCcHHHH-HHHHHhccH-HHHHHHHHHHHHHHHHHHHHHHHhCCCceeCCC--ce
Confidence            987      56665554332222222233222 233344321 1222455667788888899999874 6655432  34


Q ss_pred             ceEEEccCCCCCcHHHHHHh-HhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          405 HLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       405 ~~~~v~~~~~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      ++.|+.+...+++..++... ++++||.+.    ||.. +....+++||++..     ..++++++..+.|.+
T Consensus       320 ~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~----pg~~f~~~~~~~iRis~~~-----~~~~~~~~~~~~l~~  383 (386)
T PRK07550        320 YFAYVRHPFPDRPSREVARRLAKEAGILCL----PGTMFGPGQEGYLRLAFAN-----ADVAGIGELVERLRA  383 (386)
T ss_pred             EEEEecCCCCCCCHHHHHHHHHHhcCEEEe----CchhhCCCCCCEEEEEeec-----CCHHHHHHHHHHHHh
Confidence            66777775435667777665 578999995    4432 11225689999743     347899888888865

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.93  E-value=3.5e-23  Score=215.49  Aligned_cols=327  Identities=18%  Similarity=0.138  Sum_probs=219.4

Q ss_pred             EecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHH
Q 009673          107 LIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT  186 (529)
Q Consensus       107 L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~  186 (529)
                      |.....+..|.+.+++...+...+  +.+.  .+.+   ..++++.+++++++++|++...   .+...+|++++..++.
T Consensus        25 ~~~~~~~~~~~~~~a~~~~~~~~~--~~~~--~~~~---~~~~~~~~~~~la~~~g~~~~~---~~~~~ggt~a~~~a~~   94 (371)
T PRK13520         25 LSSMCTEPHPIARKAHEMFLETNL--GDPG--LFPG---TAKLEEEAVEMLGELLHLPDAY---GYITSGGTEANIQAVR   94 (371)
T ss_pred             eeeeecCchHHHHHHHHHHHhcCC--CCcc--cCcc---HHHHHHHHHHHHHHHhCCCCCC---eEEecCcHHHHHHHHH
Confidence            444445677888999987765432  2332  2222   2344456779999999987642   2334566799988887


Q ss_pred             hhcC----CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673          187 AILK----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY  262 (529)
Q Consensus       187 all~----pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~  262 (529)
                      ++.+    +||+|++.++.|.++.        +.+...|.  +++.++.+ +++.+|+++|++.+++ ++++|++..+++
T Consensus        95 ~~~~~~~~~~~~vl~~~~~h~s~~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~-~~~~vi~~~~~~  162 (371)
T PRK13520         95 AARNLAKAEKPNIVVPESAHFSFD--------KAADMLGV--ELRRAPLD-DDYRVDVKAVEDLIDD-NTIGIVGIAGTT  162 (371)
T ss_pred             HHHhhccCCCceEEecCcchHHHH--------HHHHHcCc--eEEEecCC-CCCcCCHHHHHHHHhh-CCEEEEEEcCCc
Confidence            7643    6899999887654321        12234454  45555554 4578999999999987 677666554433


Q ss_pred             --CCCCCHHHHHHHHHHhCCEEEEecccccccccccccCC--C--CCcccEEEecccccccC-CCCeEEEeeCCCcchhH
Q 009673          263 --PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--P--FKYCDVVTTTTHKSLRG-PRGGMIFFKKDPVLGVE  335 (529)
Q Consensus       263 --p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~--~~~aDiv~~S~hK~l~G-prgG~i~~~~~~~~~~~  335 (529)
                        +...|+++|.++|+++|+++++|++|..+.........  .  ..++|.+++|+|||+.+ .++|++++.++     +
T Consensus       163 ~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~-----~  237 (371)
T PRK13520        163 ELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDE-----S  237 (371)
T ss_pred             CCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEEEcCH-----H
Confidence              34789999999999999999999998755432211111  1  12689999999998754 34576666553     4


Q ss_pred             HHhhhcccccCCC--------CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673          336 LESAINNAVFPGL--------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV  407 (529)
Q Consensus       336 l~~~i~~~~~p~~--------~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~  407 (529)
                      +.+.+... .++.        .|+++...++++..+++.+...+++++.++..++++++.+.|++.|++++.+. ..+++
T Consensus       238 ~~~~l~~~-~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~v  315 (371)
T PRK13520        238 YLDALAVD-TPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGFEPVIEP-VLNIV  315 (371)
T ss_pred             HHHhhccc-CccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCC-CceEE
Confidence            55554311 1211        23444445667777887766667788899999999999999998899843321 23455


Q ss_pred             EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .+++.    +.+++.+.|.+.||.+....        .++.+||+++..+    +++|++++++.|++++.
T Consensus       316 ~~~~~----~~~~v~~~L~~~gi~v~~~~--------~~~~iRis~~~~~----t~edi~~~~~~l~~~~~  370 (371)
T PRK13520        316 AFDDP----NPDEVREKLRERGWRVSVTR--------CPEALRIVCMPHV----TREHIENFLEDLKEVKK  370 (371)
T ss_pred             EEecC----CHHHHHHHHHHCCceeccCC--------CCCEEEEEEECCC----CHHHHHHHHHHHHHHhh
Confidence            55553    46788888888899985421        2467999976654    58999999999987654

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=99.93  E-value=2.4e-23  Score=215.27  Aligned_cols=329  Identities=13%  Similarity=0.089  Sum_probs=216.7

Q ss_pred             eeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHH
Q 009673          105 LELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PAN  181 (529)
Q Consensus       105 i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~  181 (529)
                      +++..+++  ++++.+.+++.+....  ...|+.      .....++++.+.+++.+.+|++.+. ..+|.+|+|+ +|+
T Consensus         3 ~~~~~g~p~~~~~~~~~~~~~~~~~~--~~~Y~~------~~G~~~lr~aia~~~~~~~g~~~~~-~~~Iiit~Gs~~ai   73 (350)
T TIGR03537         3 FDFGTGDPKEPTPPFIRKALIDAVPE--VSQYPS------ALGTKALREAISGWFERRFGVKLDP-DAQVLPSAGSKEAI   73 (350)
T ss_pred             EeccCCCCCCCCCHHHHHHHHHHHhc--cCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCC-CCcEEEcCChHHHH
Confidence            34444443  3578888888765431  112332      1223466666678888777865321 0157789998 899


Q ss_pred             HHHHHhhcCCC---CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEE
Q 009673          182 FEVYTAILKPH---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA  257 (529)
Q Consensus       182 ~~~l~all~pG---D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~  257 (529)
                      +.++.++++||   |+|++++|.|.++.        ..+...|.  ++++++++++ ++.+|++++++++.+ ++|+|++
T Consensus        74 ~~~~~~~~~~g~~~d~Vl~~~p~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~~~i~i  142 (350)
T TIGR03537        74 FHFPLVFIDPEEDRRRVIFGTPGYPVYE--------RGALFAGG--EPTAVKLKKEDGFLLRLEKVEKSILE-ETKIVWI  142 (350)
T ss_pred             HHHHHHHcCCCCCCceEEEcCCCCcchH--------HHHHhcCC--EEEEcccCcccCCccCHHHHHHhhhh-ccEEEEE
Confidence            99999999988   69999998775443        23445565  7777777643 467999999999887 8999999


Q ss_pred             cCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCCC-c--ccEEEecccccc--cCCCCeEEEee
Q 009673          258 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-Y--CDVVTTTTHKSL--RGPRGGMIFFK  327 (529)
Q Consensus       258 ~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~--aDiv~~S~hK~l--~GprgG~i~~~  327 (529)
                      +.|+||+  ..+   +++|.++|+++|+++|+|+++. .+...+..++... .  -.+++.|+||++  +|.|.||++.+
T Consensus       143 ~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~  221 (350)
T TIGR03537       143 NYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYT-EIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGD  221 (350)
T ss_pred             eCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEecccc-ccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecC
Confidence            9899997  455   8889999999999999999854 2222221111111 1  237888999986  78899999987


Q ss_pred             CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673          328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV  407 (529)
Q Consensus       328 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~  407 (529)
                      +      ++.+++.....+...+.+...+.++. .++.  .....++.++++.++++.+.+.|.+.|+.+..+ ..+.++
T Consensus       222 ~------~~~~~~~~~~~~~~~~~~~~~q~~~~-~~l~--~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~-~g~~~~  291 (350)
T TIGR03537       222 E------KLISFLRKLRANFGVASPDFVQAAAK-AAWS--DDNHVLERRKIFKRKRDLFIEFFNKVGLEYLYP-DATFYL  291 (350)
T ss_pred             H------HHHHHHHHHHHhhccCCCHHHHHHHH-HHhC--CcHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-CeEEEE
Confidence            6      67666654433322333333223222 2332  112235667778888888999998888876654 235567


Q ss_pred             EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      |+++.. +++..++.+.|.++||.+.    ||.. +....+++||++.      .+++++++..+.+++
T Consensus       292 ~~~~~~-~~~~~~l~~~L~~~gv~v~----~g~~f~~~~~~~~Ri~~~------~~~~~~~~~l~~~~~  349 (350)
T TIGR03537       292 WVKVPS-GIDAKDYALRLLENGIVVA----PGENFGSGEEGYVRVALV------PTLEECEEALRLWER  349 (350)
T ss_pred             EEECCC-CCCHHHHHHHHHHCCEEEc----CchhhCCCCCCEEEEEec------CCHHHHHHHHHHHhc
Confidence            777753 4566778888878999994    4433 1223578999862      236788887776653

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PRK08636 aspartate aminotransferase; Provisional

Probab=99.93  E-value=4.5e-23  Score=217.29  Aligned_cols=340  Identities=16%  Similarity=0.132  Sum_probs=217.7

Q ss_pred             cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.++|..++.  .+++.+++++...+......+|+.   ..|   ...+++.+.+++.+.+|.+.+. .-+|.+|+|+ +
T Consensus        34 ~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~lR~~ia~~l~~~~~~~~~~-~~~I~it~G~~~  106 (403)
T PRK08636         34 DIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSV---SKG---IYKLRLAICNWYKRKYNVDLDP-ETEVVATMGSKE  106 (403)
T ss_pred             CEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCC---CCC---CHHHHHHHHHHHHHHhCCCCCC-CCeEEECCChHH
Confidence            4577765543  256667777765443211223432   122   3356666668888888865321 0147779998 9


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHH----HHHhhh--cCC
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDML----EKTAIL--FRP  252 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~l----e~~i~~--~~p  252 (529)
                      |+..++.++++|||.|++++|.|.++..        .....|.  ++++++++. +++.+|++.+    +++++.  .++
T Consensus       107 al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~  176 (403)
T PRK08636        107 GYVHLVQAITNPGDVAIVPDPAYPIHSQ--------AFILAGG--NVHKMPLEYNEDFELDEDQFFENLEKALRESSPKP  176 (403)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEEeccccccCccChhhhhhHHHHHHhhccCCc
Confidence            9999999999999999999998765432        2344565  666666642 3478898754    555543  267


Q ss_pred             cEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCC---CC-ccc--EEEecccccc--cCC
Q 009673          253 KLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK-YCD--VVTTTTHKSL--RGP  319 (529)
Q Consensus       253 klIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~~-~aD--iv~~S~hK~l--~Gp  319 (529)
                      ++|+++.|+||+  ..   .+++|.++|++|++++|+|+++ ..+.+.+....+   ++ ..|  +++.|++|++  +|.
T Consensus       177 ~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y-~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl  255 (403)
T PRK08636        177 KYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAY-ADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGW  255 (403)
T ss_pred             eEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccc-hhhccCCCCCCChhcCCCccccEEEEEecccccCCccc
Confidence            889998889997  33   4678888999999999999984 444443321111   12 223  4578999987  899


Q ss_pred             CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec
Q 009673          320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS  399 (529)
Q Consensus       320 rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~  399 (529)
                      |.||+++++      ++.+.+.+.......+.+...+.++. .++... ....++.++.+.++++.+.+.|.+.|+.+..
T Consensus       256 RiG~iv~~~------~li~~~~~~~~~~~~~~~~~~q~~~~-~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  327 (403)
T PRK08636        256 RVGFVVGNK------KLVGALKKIKSWLDYGMFTPIQVAAT-IALDGD-QSCVEEIRETYRKRRDVLIESFANAGWELQK  327 (403)
T ss_pred             eeeeeeCCH------HHHHHHHHHHHHhcccCChHHHHHHH-HHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence            999999887      67666554322111233334444332 234321 1223566777888888999999888877654


Q ss_pred             CCCCCceEEEccCCC--CCcHHHHH-HhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          400 GGSDNHLVLVDLRPM--GIDGARVE-KILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       400 ~gt~~~~~~v~~~~~--~i~~~~~~-~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      + ..+.++|+++++.  +++..++. ++++++||.+.    ||.. +....+++||++.      ..++++++..+.|++
T Consensus       328 p-~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~----pg~~f~~~~~~~iRi~~~------~~~~~l~~~~~rl~~  396 (403)
T PRK08636        328 P-RASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVS----PGIGFGEYGDEYVRIALI------ENENRIRQAARNIKK  396 (403)
T ss_pred             C-CcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEe----cchhhCcCCCCeEEEEec------CCHHHHHHHHHHHHH
Confidence            4 2356778887532  23445554 55778999994    5543 1223578999873      347888888888887


Q ss_pred             HHHH
Q 009673          476 GVEI  479 (529)
Q Consensus       476 ~~~~  479 (529)
                      +++.
T Consensus       397 ~l~~  400 (403)
T PRK08636        397 FLKE  400 (403)
T ss_pred             HHHh
Confidence            7753

>PLN02656 tyrosine transaminase

Probab=99.93  E-value=1.1e-23  Score=222.18  Aligned_cols=345  Identities=16%  Similarity=0.074  Sum_probs=222.0

Q ss_pred             hcceeEecCCC------CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecC
Q 009673          102 FKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL  175 (529)
Q Consensus       102 ~~~i~L~asen------~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~  175 (529)
                      ++.|+|..+++      .+|+.+++++.+.+......+|..   ..|   ..++++.+.+++.+.+|...+.  .+|.++
T Consensus        31 ~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~lr~~ia~~~~~~~g~~~~~--~~i~~t  102 (409)
T PLN02656         31 KRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAP---TVG---LPQARRAIAEYLSRDLPYKLSL--DDVFIT  102 (409)
T ss_pred             CeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCC---CCC---CHHHHHHHHHHHHHhcCCCCCc--ccEEEe
Confidence            46788887775      357999999987765432223322   112   2355555556776666654322  256667


Q ss_pred             ChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCc
Q 009673          176 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPK  253 (529)
Q Consensus       176 sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pk  253 (529)
                      +|+ +|+..++.++++|||+|++++|.|..+.        ......|.  +++.++++++ ++.+|++++++.+++ +++
T Consensus       103 ~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--------~~~~~~g~--~~~~i~~~~~~~~~~d~~~l~~~~~~-~~~  171 (409)
T PLN02656        103 SGCTQAIDVALSMLARPGANILLPRPGFPIYE--------LCAAFRHL--EVRYVDLLPEKGWEVDLDAVEALADQ-NTV  171 (409)
T ss_pred             CChHHHHHHHHHHHhCCCCeEEEeCCCCCcHH--------HHHHHcCC--EEEEEeCCCcCCCCCCHHHHHHHhcc-Cce
Confidence            877 9999999999999999999999875431        12233454  6666666533 568999999998877 788


Q ss_pred             EEEEcCCCCCC--C---CCHHHHHHHHHHhCCEEEEecccccccccccccCCCC---Cc--ccEEEecccccc--cCCCC
Q 009673          254 LIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY--CDVVTTTTHKSL--RGPRG  321 (529)
Q Consensus       254 lIi~~~s~~p~--~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~~--aDiv~~S~hK~l--~Gprg  321 (529)
                      +|++++|+||+  .   .++++|.++|+++|++||+|++ |.++.+.+....++   ..  .-+++.|++|++  +|+|.
T Consensus       172 ~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~-y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRi  250 (409)
T PLN02656        172 ALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEV-YGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRL  250 (409)
T ss_pred             EEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehh-hhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeE
Confidence            88888899987  3   3688999999999999999998 44555443211222   11  127789999984  89999


Q ss_pred             eEEEeeCCCcc--hhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEe
Q 009673          322 GMIFFKKDPVL--GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLV  398 (529)
Q Consensus       322 G~i~~~~~~~~--~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~  398 (529)
                      ||++++++...  ..++.+++...... . ++++.....++..+++......+++.++++.++++.+.+.|++. ++...
T Consensus       251 G~~i~~~~~~~~~~~~~~~~~~~~~~~-~-~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~  328 (409)
T PLN02656        251 GWFVTTDPSGSFRDPKIVERIKKYFDI-L-GGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCP  328 (409)
T ss_pred             EEEEEeCcccccccHHHHHHHHHHHhh-h-cCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCC
Confidence            99998531000  01455555443221 1 22233333344445543212235777888889999999999875 33322


Q ss_pred             cCCCCCceEEEccCC---CCC-cH-HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673          399 SGGSDNHLVLVDLRP---MGI-DG-ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI  473 (529)
Q Consensus       399 ~~gt~~~~~~v~~~~---~~i-~~-~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i  473 (529)
                      .....+.++|+++..   .+. +. +.+.++|.++||.+.    ||.... .++++||++.      .+++++++..+.|
T Consensus       329 ~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~----pg~~fg-~~~~iRi~~~------~~~e~l~eal~rl  397 (409)
T PLN02656        329 HKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIIL----PGTAVG-LKNWLRITFA------ADPSSLEEALGRI  397 (409)
T ss_pred             cCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEe----cchhcC-CCCeEEEEeC------CCHHHHHHHHHHH
Confidence            222234667877742   112 23 346788899999994    554321 3578999964      2478888888888


Q ss_pred             HHHHHH
Q 009673          474 HEGVEI  479 (529)
Q Consensus       474 ~~~~~~  479 (529)
                      ++++..
T Consensus       398 ~~~~~~  403 (409)
T PLN02656        398 KSFYLR  403 (409)
T ss_pred             HHHHHH
Confidence            877653

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=99.93  E-value=1.5e-23  Score=214.99  Aligned_cols=325  Identities=22%  Similarity=0.260  Sum_probs=233.0

Q ss_pred             ecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673          108 IASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF  182 (529)
Q Consensus       108 ~asen~~----~~~V~eal~~~l~~~y~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~  182 (529)
                      ..|+||+    +|.+++++...+ .+|..|..++|...|+ +.+.+||    +.+++++|.+..     +..+||..||.
T Consensus        44 f~SNdYLGLa~~~~~~~a~~~~~-~~~g~g~~gsR~i~G~~~~h~~LE----~~lA~f~g~e~a-----l~f~SGy~AN~  113 (388)
T COG0156          44 FCSNDYLGLASHPELIEAAKAAI-RRYGVGAGGSRLISGTSDLHVELE----EELADFLGAEAA-----LLFSSGFVANL  113 (388)
T ss_pred             eeccCcccccCCHHHHHHHHHHH-HHhCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCcE-----EEEcccchhHH
Confidence            4577775    788999998776 4566778888966655 5567788    788999999962     55799999999


Q ss_pred             HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCcEEEE
Q 009673          183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIA  257 (529)
Q Consensus       183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-----~pklIi~  257 (529)
                      .++.+|+++||.|+.....|.+.+.        .++.+++  +.+.|.      ..|+++||+.+++.     +.++|++
T Consensus       114 ~~i~~l~~~~dli~~D~lnHASiid--------G~rls~a--~~~~f~------HnD~~~Le~~l~~~~~~~~~~~~Ivt  177 (388)
T COG0156         114 GLLSALLKKGDLIFSDELNHASIID--------GIRLSRA--EVRRFK------HNDLDHLEALLEEARENGARRKLIVT  177 (388)
T ss_pred             HHHHHhcCCCcEEEEechhhhhHHH--------HHHhCCC--cEEEec------CCCHHHHHHHHHhhhccCCCceEEEE
Confidence            9999999999999998887755431        3445554  555554      46889999999763     1456665


Q ss_pred             c--CCCCCCCCCHHHHHHHHHHhCCEEEEeccccccccccc---cc-CCCCC--cccEEEecccccccCCCCeEEEeeCC
Q 009673          258 G--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAAS---VV-ADPFK--YCDVVTTTTHKSLRGPRGGMIFFKKD  329 (529)
Q Consensus       258 ~--~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~---~~-~~~~~--~aDiv~~S~hK~l~GprgG~i~~~~~  329 (529)
                      .  +|+.+...|+++|++++++||+++++|+||+.|.....   .. ...+.  ..||+++|++|.| |--||++.++. 
T Consensus       178 egVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAl-Gs~Gg~v~g~~-  255 (388)
T COG0156         178 EGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKAL-GSSGGYIAGSA-  255 (388)
T ss_pred             eccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhh-cccCceeeCcH-
Confidence            5  67777799999999999999999999999999987642   11 11121  3589999999998 57889999998 


Q ss_pred             CcchhHHHhhhcccccCCCCCCChHH-HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEE
Q 009673          330 PVLGVELESAINNAVFPGLQGGPHNH-TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL  408 (529)
Q Consensus       330 ~~~~~~l~~~i~~~~~p~~~g~p~~~-~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~  408 (529)
                           .+.+.+.....|++.++...+ ..++...+++.+.  +..+.++++.++...+...+...|+.+..  +.++++.
T Consensus       256 -----~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~--~~~~~r~~L~~~~~~~~~~~~~~~~~~~~--s~s~I~p  326 (388)
T COG0156         256 -----ALIDYLRNRARPFIFSTALPPAVAAAALAALRILE--EGPERRERLQELAAFFRSLLKALGLVLLP--SESPIIP  326 (388)
T ss_pred             -----HHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHhcCCccCC--CCCCeee
Confidence                 777777655455554443333 3344445677654  34677888999999998777777887643  3456554


Q ss_pred             EccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          409 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      +-+.... ....+...|.+.||.+.....|  +.|.+...+|++..+    .++++|++++++.+.++
T Consensus       327 v~~gd~~-~a~~~s~~l~~~Gi~v~~i~~P--TVp~gtarlRi~lta----~ht~~~I~~l~~~l~~~  387 (388)
T COG0156         327 VILGDEE-RALEASRALLEEGIYVSAIRPP--TVPKGTARLRITLTA----AHTEEDIDRLAEALSEV  387 (388)
T ss_pred             eEeCCHH-HHHHHHHHHHHCCeeEeeecCC--CCCCCcceEEEEecC----CCCHHHHHHHHHHHHhh
Confidence            4444322 2344555565559998764323  234456789998765    46799999999998764

>PRK06225 aspartate aminotransferase; Provisional

Probab=99.93  E-value=3.5e-23  Score=216.45  Aligned_cols=335  Identities=16%  Similarity=0.147  Sum_probs=216.6

Q ss_pred             hcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673          102 FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-  178 (529)
Q Consensus       102 ~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-  178 (529)
                      .+.|+|..++|  +.++.+++++...+.......|+.      .+...++    ++++++++|++++    +|.+++|+ 
T Consensus        28 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~------~~g~~~l----r~~ia~~l~~~~~----~v~~~~g~t   93 (380)
T PRK06225         28 KEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPP------PEGFPEL----RELILKDLGLDDD----EALITAGAT   93 (380)
T ss_pred             CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCC------CcchHHH----HHHHHHhcCCCCC----cEEEeCCHH
Confidence            35688877776  468899999988775432222322      1222333    4778888999875    34456655 


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC--CCCCCCHHHHHHHhhhcCCcEEE
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE--STGLVDYDMLEKTAILFRPKLII  256 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~--~~~~iD~d~le~~i~~~~pklIi  256 (529)
                      +|+..++.+++++||+|++++|.|..+.        ..+...|.  ++++++++.  .++.+|++++++.+++ ++++|+
T Consensus        94 ~al~~~~~~~~~~gd~vl~~~p~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~~d~~~l~~~~~~-~~~~v~  162 (380)
T PRK06225         94 ESLYLVMRAFLSPGDNAVTPDPGYLIID--------NFASRFGA--EVIEVPIYSEECNYKLTPELVKENMDE-NTRLIY  162 (380)
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchH--------HHHHHhCc--eEEeeccccccCCccCCHHHHHhhcCC-CceEEE
Confidence            9999999999999999999998664321        12234454  566666532  2468999999999887 789998


Q ss_pred             EcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccc--cCCCCeEEEeeC
Q 009673          257 AGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSL--RGPRGGMIFFKK  328 (529)
Q Consensus       257 ~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l--~GprgG~i~~~~  328 (529)
                      +.+|+||+  ..   ++++|.++|+++|+++|+|+++ .++.........+. ...+++.|++|++  +|.|.||+++++
T Consensus       163 l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~  241 (380)
T PRK06225        163 LIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTY-RDFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATP  241 (380)
T ss_pred             EeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhH-HHHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecCH
Confidence            88888886  22   5889999999999999999984 23221110000111 2357888999987  477889999987


Q ss_pred             CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceE
Q 009673          329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLV  407 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~  407 (529)
                            ++.+.+...... ..+. +....++...++... ....+...+.+.++++.+.+.|++ .|+.+........++
T Consensus       242 ------~l~~~~~~~~~~-~~~~-~~~~~~~a~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~  312 (380)
T PRK06225        242 ------DLIEVVKSIVIN-DLGT-NVIAQEAAIAGLKVK-DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMM  312 (380)
T ss_pred             ------HHHHHHHHHHhc-ccCC-CHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEE
Confidence                  676665543211 1222 222222222344321 112244445556667778888887 464332111234567


Q ss_pred             EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      |+++...+++..++.+.|.++||.+..+...+  ....++++|+++.      .++++++++++.|++++..
T Consensus       313 ~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~--~~~~~~~iR~s~~------~~~e~l~~~~~~l~~~~~~  376 (380)
T PRK06225        313 VIDISEAGIDPEDLVEYLLERKIFVRQGTYTS--KRFGDRYIRVSFS------IPREQVEVFCEEFPDVVET  376 (380)
T ss_pred             EEEcccccCCHHHHHHHHHHCCEEEcCCcccC--cCCCCceEEEEeC------CCHHHHHHHHHHHHHHHHH
Confidence            88876555677888888889999995432111  1224578999963      3579999999999988763

>PRK07777 aminotransferase; Validated

Probab=99.93  E-value=3.5e-23  Score=216.95  Aligned_cols=359  Identities=15%  Similarity=0.135  Sum_probs=225.3

Q ss_pred             cccCChHHHHHHHHHHHHhhcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673           83 LGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA  160 (529)
Q Consensus        83 l~~~d~~~~~~~~~e~~~~~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~  160 (529)
                      +....++++..+.+... ....++|..+..  ..++.+.+++...+.... .+|+.      .....++++.+.+++.+.
T Consensus         6 ~~~~~~~~~~~~~~~~~-~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~   77 (387)
T PRK07777          6 LRPFGTTIFAEMSALAV-RTGAVNLGQGFPDEDGPPEMLEAAQEAIAGGV-NQYPP------GPGIPELRAAIAAQRRRR   77 (387)
T ss_pred             hhhcCccHHHHHHHHHh-hCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHHHHH
Confidence            44445554443333332 235688876542  245667777766554321 12322      222346666666778888


Q ss_pred             cCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC--CCC
Q 009673          161 FNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGL  237 (529)
Q Consensus       161 ~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~--~~~  237 (529)
                      +|.+.+.- .+|.+++|+ +|+.+++.++++|||+|++..|.|.++.        ..+...|.  +++.++++++  ++.
T Consensus        78 ~g~~~~~~-~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~--------~~~~~~g~--~~~~~~~~~~~~~~~  146 (387)
T PRK07777         78 YGLEYDPD-TEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYA--------AVIAMAGA--HRVPVPLVPDGRGFA  146 (387)
T ss_pred             hCCCCCCC-CcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhH--------HHHHHCCC--EEEEeecCCccCCCc
Confidence            88864210 135567776 8999999999999999999998775432        12334454  5556666543  467


Q ss_pred             CCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC------Cccc
Q 009673          238 VDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF------KYCD  306 (529)
Q Consensus       238 iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~------~~aD  306 (529)
                      +|++++++.+.+ ++++|++++++||+  ..   ++++|.++|+++|+++|+|+++ .++.+.+....++      ...+
T Consensus       147 ~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y-~~~~~~~~~~~~~~~~~~~~~~~  224 (387)
T PRK07777        147 LDLDALRAAVTP-RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVY-EHLVFDGARHLPLATLPGMRERT  224 (387)
T ss_pred             CCHHHHHHhcCc-ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccc-hhcccCCCCcccHhhCCCCcCcE
Confidence            999999999877 89999999888887  22   5889999999999999999985 4444332211121      1346


Q ss_pred             EEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673          307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR  384 (529)
Q Consensus       307 iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~  384 (529)
                      +++.|+||++  +|.|.||+++++      ++.+.+...........+...+. +++.++... ....+...+.+.++++
T Consensus       225 i~~~S~SK~~g~~GlRiG~~~~~~------~l~~~~~~~~~~~~~~~~~~~q~-~~~~~l~~~-~~~~~~~~~~~~~~~~  296 (387)
T PRK07777        225 VTISSAAKTFNVTGWKIGWACGPA------PLIAAVRAAKQYLTYVGGAPFQP-AVAHALDHE-DAWVAALRDSLQAKRD  296 (387)
T ss_pred             EEEeechhhccCcCceeEEEecCH------HHHHHHHHHHhhcccCCCCHHHH-HHHHHHhCC-cHHHHHHHHHHHHHHH
Confidence            8999999987  588889999887      56665543221111111222222 222334321 2233667788899999


Q ss_pred             HHHHHHHhcCcEEecCCCCCceEEEccCCCC-CcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCC
Q 009673          385 ALASRLVELGYKLVSGGSDNHLVLVDLRPMG-IDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS  462 (529)
Q Consensus       385 ~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~-i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~  462 (529)
                      .+.+.|.+.|+.+..+ ..++++|++++..+ .++.++.+.| +++||.|.++...+...+..++++||++.      ..
T Consensus       297 ~l~~~L~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~------~~  369 (387)
T PRK07777        297 RLAAGLAEAGFEVHDS-AGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFC------KR  369 (387)
T ss_pred             HHHHHHHhCCCCccCC-CcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEec------CC
Confidence            9999999888876654 23566676764322 3556666666 67899995432111111123568999864      24


Q ss_pred             HHHHHHHHHHHHHHH
Q 009673          463 EKEFVAIADFIHEGV  477 (529)
Q Consensus       463 ~~d~~~la~~i~~~~  477 (529)
                      ++++++..+.|.++.
T Consensus       370 ~~~l~~~l~~l~~~~  384 (387)
T PRK07777        370 DDTLDEAIRRLRALR  384 (387)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            788888888877654

>PRK07324 transaminase; Validated

Probab=99.93  E-value=1.1e-23  Score=219.66  Aligned_cols=328  Identities=19%  Similarity=0.169  Sum_probs=211.0

Q ss_pred             cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc-CCCCCCCceeeecCChH-
Q 009673          103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF-NLDENKWGVNVQPLSGS-  178 (529)
Q Consensus       103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~-g~~~~~~~~~V~~~sGs-  178 (529)
                      +.++|..+|.  .+|+.+ +++...+.+.. .+|..   ..|.   .+++    +.+++++ +++++    +|.+++|+ 
T Consensus        27 ~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~-~~Y~~---~~G~---~~lr----~~ia~~~~~~~~~----~vi~t~G~~   90 (373)
T PRK07324         27 CIDSLTLEELLALAGKNP-EAFYQELGQKK-LTYGW---IEGS---PEFK----EAVASLYQNVKPE----NILQTNGAT   90 (373)
T ss_pred             CCCCCcHHHHHhccCcch-HHHHHHHhcCC-ccCCC---CCCC---HHHH----HHHHHHhcCCChh----hEEEcCChH
Confidence            4566666664  356666 76665554321 13322   1122   3444    4455555 35554    45567776 


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEE
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA  257 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~  257 (529)
                      +|+..++.++++|||+|+++.|.|..+.        ..+...|.  +++.++++++ ++.+|++++++.+++ ++|+|++
T Consensus        91 ~al~~~~~~l~~~gd~Vl~~~P~y~~~~--------~~~~~~g~--~v~~v~~~~~~~~~~d~~~l~~~~~~-~~kli~i  159 (373)
T PRK07324         91 GANFLVLYALVEPGDHVISVYPTYQQLY--------DIPESLGA--EVDYWQLKEENGWLPDLDELRRLVRP-NTKLICI  159 (373)
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCCchhHH--------HHHHHcCC--EEEEEecccccCCCCCHHHHHHhCCC-CCcEEEE
Confidence            9999999999999999999998765432        12234454  6667777654 367899999998877 8999999


Q ss_pred             cCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccc--cCCCCeEEEeeC
Q 009673          258 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKK  328 (529)
Q Consensus       258 ~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l--~GprgG~i~~~~  328 (529)
                      ++|+||+  ..+   +++|+++|++||+++++|++ |.++...+..++...  .-.|++.|++|++  +|+|.||+++++
T Consensus       160 ~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~-y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~  238 (373)
T PRK07324        160 NNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEV-YRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANE  238 (373)
T ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcc-ccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCH
Confidence            9999987  555   88899999999999999998 456554332222222  1237889999986  699999999976


Q ss_pred             CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceE
Q 009673          329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLV  407 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~  407 (529)
                            ++.+.+.+.......+.+...+.++. .+++.. ....+...+.+.++++.+.+.|.+. ++.++.+. ...+.
T Consensus       239 ------~li~~~~~~~~~~~~~~~~~~q~~a~-~~l~~~-~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~-gg~~~  309 (373)
T PRK07324        239 ------EVIDILRKYRDYTMICAGVFDDMLAS-LALEHR-DAILERNRKIVRTNLAILDEWVAKEPRVSYVKPK-AVSTS  309 (373)
T ss_pred             ------HHHHHHHHHhCcEEecCChHHHHHHH-HHHcCH-HHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCC-ceEEE
Confidence                  67776665432222233333344332 234321 1123556667778888888888774 66655542 22344


Q ss_pred             EEccCCCCCcHHHH-HHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARV-EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       408 ~v~~~~~~i~~~~~-~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      ++.+.. +++..++ .++|+++||.+    .||.... .++++||++.      ..++.+++..+.|.+.+..
T Consensus       310 ~i~~~~-~~~~~~~~~~ll~~~gv~v----~pg~~F~-~~~~iRis~~------~~~~~l~~~l~rl~~~l~~  370 (373)
T PRK07324        310 FVKLDV-DMPSEDFCLKLLKETGVLL----VPGNRFD-LEGHVRIGYC------CDTETLKKGLKKLSEFLRE  370 (373)
T ss_pred             EEEeCC-CCCHHHHHHHHHHhcCEEE----ECccccC-CCCeEEEEec------CCHHHHHHHHHHHHHHHHh
Confidence            554532 3455555 45568899999    4554421 3579999963      3467888888888777653

>PLN02187 rooty/superroot1

Probab=99.93  E-value=4.2e-23  Score=220.56  Aligned_cols=346  Identities=13%  Similarity=0.081  Sum_probs=219.5

Q ss_pred             cceeEecCCC-----C-CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC
Q 009673          103 KSLELIASEN-----F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS  176 (529)
Q Consensus       103 ~~i~L~asen-----~-~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s  176 (529)
                      +.|.|..++.     + +++.+.+++...+......+|.      ......++++.+.+++.+.+|...+.  -+|.+++
T Consensus        67 ~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~------~~~G~~~lR~aiA~~~~~~~~~~~~~--~~I~it~  138 (462)
T PLN02187         67 TILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYG------PGAGILPARRAVADYMNRDLPHKLTP--EDIFLTA  138 (462)
T ss_pred             CeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC------CCCChHHHHHHHHHHHHHhcCCCCCc--ccEEEeC
Confidence            5688876653     2 4678888888776533212232      12223456655667776665543221  2566788


Q ss_pred             hH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcE
Q 009673          177 GS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKL  254 (529)
Q Consensus       177 Gs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pkl  254 (529)
                      |+ +|+..++.++++|||+|++++|.|.++.        ..+...|.  +++.+++.+ +++.+|++++++++++ ++++
T Consensus       139 G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~--------~~~~~~g~--~~~~~~l~~~~~~~~d~~~l~~~~~~-~~~~  207 (462)
T PLN02187        139 GCNQGIEIVFESLARPNANILLPRPGFPHYD--------ARAAYSGL--EVRKFDLLPEKEWEIDLEGIEAIADE-NTVA  207 (462)
T ss_pred             CHHHHHHHHHHHhcCCCCEEEEeCCCCccHH--------HHHHHcCC--EEEEEeCccccCCccCHHHHHHhcCC-CcEE
Confidence            87 9999999999999999999999876432        12334555  555665543 3589999999999876 7889


Q ss_pred             EEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC----c-ccEEEecccccc--cCCCCe
Q 009673          255 IIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----Y-CDVVTTTTHKSL--RGPRGG  322 (529)
Q Consensus       255 Ii~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~----~-aDiv~~S~hK~l--~GprgG  322 (529)
                      |++++|+||+  ..   .+++|.++|++||++||+|++ |..+++.+....++.    . .-++++|++|++  +|+|.|
T Consensus       208 v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~-Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG  286 (462)
T PLN02187        208 MVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEV-YDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIG  286 (462)
T ss_pred             EEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEecc-ccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeE
Confidence            9998899997  44   478888999999999999998 455554432111221    1 126779999985  899999


Q ss_pred             EEEeeCCCcchhHHHhhhcccccCC-CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEE-ecC
Q 009673          323 MIFFKKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL-VSG  400 (529)
Q Consensus       323 ~i~~~~~~~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v-~~~  400 (529)
                      |++++++... .++.+.+.....+. ...+++....+++..+|+......+++..+.+.++++.+.+.|++.+... +..
T Consensus       287 ~~v~~~p~~~-~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~  365 (462)
T PLN02187        287 WIALNDPEGV-FETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKK  365 (462)
T ss_pred             EEEecCchhH-HHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCC
Confidence            9998542100 00222333222111 11222333334444456431112347778888999999999998854322 211


Q ss_pred             CCCCceEEEccCC---CCC-cH-HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          401 GSDNHLVLVDLRP---MGI-DG-ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       401 gt~~~~~~v~~~~---~~i-~~-~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      .....++|+++..   .++ +. +.+.+++.++||.+.    ||.... .+++|||++.      ..++.+++..++|.+
T Consensus       366 P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~----pG~~fg-~~~~iRis~~------~~~e~l~~al~rL~~  434 (462)
T PLN02187        366 PESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFL----PGDALG-LKNWMRITIG------VEAHMLEDALERLKG  434 (462)
T ss_pred             CCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEE----CccccC-CCCeEEEEeC------CCHHHHHHHHHHHHH
Confidence            1234666776532   222 33 445677799999994    554321 3578999863      347888888888888


Q ss_pred             HHHHH
Q 009673          476 GVEIT  480 (529)
Q Consensus       476 ~~~~~  480 (529)
                      +++..
T Consensus       435 ~l~~~  439 (462)
T PLN02187        435 FCTRH  439 (462)
T ss_pred             HHHHh
Confidence            87644

>PRK05764 aspartate aminotransferase; Provisional

Probab=99.93  E-value=6.1e-23  Score=215.53  Aligned_cols=335  Identities=16%  Similarity=0.126  Sum_probs=219.9

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      ..++|..+++.  +++.+.+++...+.+.. ..|+.      ......+++...+++.+.+|...+.  .+|.+++|+ +
T Consensus        32 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~~~~~~~~--~~i~~~~g~~~  102 (393)
T PRK05764         32 DVISLGAGEPDFDTPEHIKEAAIEALDDGK-TKYTP------AAGIPELREAIAAKLKRDNGLDYDP--SQVIVTTGAKQ  102 (393)
T ss_pred             CEEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CCcCC------CCChHHHHHHHHHHHHHHhCCCCCH--HHEEEeCCcHH
Confidence            45777776653  46888898887765322 12322      2234566666667776666643211  245567776 8


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      |+..++.+++++||.|++++|.|.++..        .+...|.  ++++++++++ ++.+|++++++.+++ ++++|+++
T Consensus       103 a~~~~~~~~~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~  171 (393)
T PRK05764        103 ALYNAFMALLDPGDEVIIPAPYWVSYPE--------MVKLAGG--VPVFVPTGEENGFKLTVEQLEAAITP-KTKALILN  171 (393)
T ss_pred             HHHHHHHHhcCCCCEEEecCCCCcchHH--------HHHHcCC--EEEEEecCcccCCcCCHHHHHHhhCc-cceEEEEE
Confidence            9999999999999999999997765421        2334454  6666666643 468999999999876 78999998


Q ss_pred             CCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCC---C--C--cccEEEecccccc--cCCCCeEE
Q 009673          259 ASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP---F--K--YCDVVTTTTHKSL--RGPRGGMI  324 (529)
Q Consensus       259 ~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~--~--~aDiv~~S~hK~l--~GprgG~i  324 (529)
                      +|+||+  ..   ++++|.++|++||+++++|+++. .+...+....+   +  +  ..++++.|++|++  +|+|.||+
T Consensus       172 ~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i  250 (393)
T PRK05764        172 SPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYE-KLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYA  250 (393)
T ss_pred             CCCCCCCcccCHHHHHHHHHHHHHCCcEEEEecccc-ceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEE
Confidence            888887  33   58899999999999999999854 44432211111   1  1  2468899999986  67788999


Q ss_pred             EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCC
Q 009673          325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSD  403 (529)
Q Consensus       325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~  403 (529)
                      ++++      ++.+.+.........+.+...+. ++..++.. .....++..+++.++++.+.+.|++. |+.+..+ ..
T Consensus       251 ~~~~------~~~~~~~~~~~~~~~~~~~~~q~-~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~g  321 (393)
T PRK05764        251 AGPK------ELIKAMSKLQSHSTSNPTSIAQY-AAVAALNG-PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKP-EG  321 (393)
T ss_pred             ecCH------HHHHHHHHHHhhcccCCChHHHH-HHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC-Cc
Confidence            9887      67766654332222222233232 22334432 12234666777888888899999886 8877654 23


Q ss_pred             CceEEEccCCC----CCcHHHHH-HhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          404 NHLVLVDLRPM----GIDGARVE-KILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       404 ~~~~~v~~~~~----~i~~~~~~-~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ++++|+++...    +.+..++. .+++++||.+.    ||.... .+++|||++.      .+++++++.++.|.++++
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~~f~-~~~~vRis~~------~~~~~~~~~i~~l~~~~~  390 (393)
T PRK05764        322 AFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVV----PGIAFG-APGYVRLSYA------TSLEDLEEGLERIERFLE  390 (393)
T ss_pred             ceEEEEecccccccccCCHHHHHHHHHHhCCEEEc----cccccC-CCCEEEEEec------CCHHHHHHHHHHHHHHHH
Confidence            45667776532    11235554 45578999994    443321 2578999863      358999999999988775

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.92  E-value=5.2e-23  Score=213.50  Aligned_cols=311  Identities=17%  Similarity=0.145  Sum_probs=206.4

Q ss_pred             CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc
Q 009673          110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL  189 (529)
Q Consensus       110 sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all  189 (529)
                      +-+++|++|+++|.....+ |         +.    .+++.+.+++++++++|.+.    + +.+.+|++|+++++.+++
T Consensus        21 g~s~~~~~v~~a~~~~~~~-~---------~~----~~~~~~~~~~~~a~~~g~~~----~-~~~~g~t~al~~al~al~   81 (363)
T TIGR01437        21 GVSTVSDEVADAQKRGAQN-Y---------FE----IKELVNKTGEYIANLLGVED----A-VIVSSASAGIAQSVAAVI   81 (363)
T ss_pred             CCCCCCHHHHHHHHHHHhc-C---------CC----HHHHHHHHHHHHHHhhCCCe----E-EEEcCHHHHHHHHHHHHh
Confidence            4456899999999877533 2         11    23444456688999999874    2 445667799999999999


Q ss_pred             CCCC---------------EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcE
Q 009673          190 KPHD---------------RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKL  254 (529)
Q Consensus       190 ~pGD---------------~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pkl  254 (529)
                      +|||               +|+++.+.+ .++..   .....+...|.  ++++++++   +.+|++++++++++ +|++
T Consensus        82 ~~Gd~~~~~~~~~s~~~~~eVi~~~~~~-~~~~~---~~~~~~~~~g~--~~v~v~~~---~~~d~~~le~ai~~-~t~a  151 (363)
T TIGR01437        82 TRGNRYLVENLHDSKIEVNEVVLPKGHN-VDYGA---PVETMVRLGGG--KVVEAGYA---NECSAEQLEAAITE-KTAA  151 (363)
T ss_pred             cCCCcchhhcccccccccceEEEECccc-hhcCC---chHHHHHhcCC--eEEEEcCC---CCCCHHHHHHhcCh-hceE
Confidence            9998               777765322 11100   00112334554  66676653   57999999999988 8997


Q ss_pred             EE-EcCCCCC--CCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccccCCCCeEEEeeCCC
Q 009673          255 II-AGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDP  330 (529)
Q Consensus       255 Ii-~~~s~~p--~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~GprgG~i~~~~~~  330 (529)
                      |+ +++++++  ...|+++|.++|++||+++++|++|...+      ..... ++|++++|+||+|+||++|+++.++  
T Consensus       152 i~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~------~~~~~~g~D~~~~S~~K~l~gp~~G~l~~~~--  223 (363)
T TIGR01437       152 ILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL------QKYYRLGADLVIYSGAKAIEGPTSGLVLGKK--  223 (363)
T ss_pred             EEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch------HHHHHcCCCEEEEeCCcccCCCceEEEEEcH--
Confidence            66 4554444  37899999999999999999999986221      11111 5899999999999999999998876  


Q ss_pred             cchhHHHhhhcccccC---CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecC--CC--
Q 009673          331 VLGVELESAINNAVFP---GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSG--GS--  402 (529)
Q Consensus       331 ~~~~~l~~~i~~~~~p---~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~--gt--  402 (529)
                          ++.+.+......   ..+.+  ...++++..+++.+...+ .+..++..++++.+.+.|.+ .|+.+...  ..  
T Consensus       224 ----~~i~~~~~~~~~~~~~~~~~--~~~~~gl~aAl~~~~~~~-~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~  296 (363)
T TIGR01437       224 ----KYIEWVKLQSKGIGRAMKVG--KENILGLTAALEQYLSTG-KESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGR  296 (363)
T ss_pred             ----HHHHHHHhccCCCcceeccC--HHHHHHHHHHHHHHHccC-cccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCC
Confidence                555544321111   11111  123677777887665322 33444555677789999988 58887632  11  


Q ss_pred             --CCceEEEccCCCCCcHHHHHHhHhcCC--eEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          403 --DNHLVLVDLRPMGIDGARVEKILDMAS--ITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       403 --~~~~~~v~~~~~~i~~~~~~~~L~~~G--I~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                        +...+.++....++++.++.+.|.+.|  |.+...  +     ...+.+|++...     ++++|++.++++|+++
T Consensus       297 ~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~--~-----~~~~~~~l~~~~-----~~~~e~~~~~~~l~~~  362 (363)
T TIGR01437       297 DIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGY--K-----ANEGIIEIDPRS-----VTGGQLDIIVERIREI  362 (363)
T ss_pred             cCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeee--e-----ecCCeEEEEeec-----CCHHHHHHHHHHHHHh
Confidence              112223444335788899999998777  666431  1     235678888653     5589999999999875

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.92  E-value=8.3e-23  Score=212.16  Aligned_cols=322  Identities=14%  Similarity=0.107  Sum_probs=208.9

Q ss_pred             ecCCCCCcHHHHHHHhhhhhccCCCCCCCC-CC---CCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHH
Q 009673          108 IASENFTSRAVMEAVGSCLTNKYSEGLPGK-RY---YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANF  182 (529)
Q Consensus       108 ~asen~~~~~V~eal~~~l~~~y~~G~p~~-r~---~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~  182 (529)
                      |.+..++.+.+++++..+.. .+  +.+.. ..   ..+.+.+.+++    +.+++++|++.      +.+++|+ +++.
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~l~----~~la~~~g~~~------i~~~~g~t~al~   73 (361)
T cd06452           7 IQRGGRLTPEARKALIEWGD-GY--SVCDFCRGRLDEIEKPPIKDFH----HDLAEFLGMDE------ARVTPGAREGKF   73 (361)
T ss_pred             hhcCCCCCHHHHHHHHHHhc-cc--CCccccccccccccCchHHHHH----HHHHHHcCCce------EEEeCCHHHHHH
Confidence            44567889999999986652 12  12211 00   11223344554    77889999832      3345555 8999


Q ss_pred             HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhh------cCCcEE
Q 009673          183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAIL------FRPKLI  255 (529)
Q Consensus       183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~------~~pklI  255 (529)
                      .++.++++|||+|++.++.|.+.+.        .+...|.  +++.++++.+ ++.+|++++++.+++      .++++|
T Consensus        74 ~~l~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv  143 (361)
T cd06452          74 AVMHSLCEKGDWVVVDGLAHYTSYV--------AAERAGL--NVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALA  143 (361)
T ss_pred             HHHHHhcCCCCEEEEcCCcchHHHH--------HHHhcCC--EEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEE
Confidence            9999999999999998876654321        2334554  6666666543 358999999998863      268899


Q ss_pred             EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccccC-CCCeEEEeeCCCc
Q 009673          256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPV  331 (529)
Q Consensus       256 i~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~G-prgG~i~~~~~~~  331 (529)
                      ++++++|++  ..|+++|.++|+++|+++++|++|+.|.....    ... ++|++++|+||++.+ +++|++++++   
T Consensus       144 ~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~----~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~---  216 (361)
T cd06452         144 LLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVS----GKELGADFIVGSGHKSMAASAPIGVLATTE---  216 (361)
T ss_pred             EEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCC----HHHcCCCEEEecCCccccCCCCeEEEEECH---
Confidence            999888775  78999999999999999999999887643211    111 589999999999854 4569999987   


Q ss_pred             chhHHHhhhcccccC-------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCC-C
Q 009673          332 LGVELESAINNAVFP-------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG-S  402 (529)
Q Consensus       332 ~~~~l~~~i~~~~~p-------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~g-t  402 (529)
                         ++.+++.....+       ...+++....++++..+++...  +..+..++..++++++.+.|++. |++++... .
T Consensus       217 ---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~  291 (361)
T cd06452         217 ---EWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVK--ERVKRWDEEVEKARWFVAELEKIEGIKQLGEKPK  291 (361)
T ss_pred             ---HHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCeEEECCCCC
Confidence               666665442211       1122333333434444554432  22223344456678899999986 99887421 2


Q ss_pred             CCceEEEccCC-------CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          403 DNHLVLVDLRP-------MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       403 ~~~~~~v~~~~-------~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      ..+++.++...       ...++.++.+.|.++||.+.   .++     ....+|+++.     |.+++|++.++++|++
T Consensus       292 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~---~~~-----~~~~~ri~~~-----g~~~e~~~~l~~al~~  358 (361)
T cd06452         292 NHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGI---KPG-----LTRYFKLSTY-----GLTWEQVEYVVDAFKE  358 (361)
T ss_pred             CCceEEEEcCCcchhhhhccccchhHHHHHHHcCceEE---cCC-----CceEEEEEec-----CCCHHHHHHHHHHHHH
Confidence            33444454421       01123468888888899863   122     2457898863     4678999999999986


Q ss_pred             HH
Q 009673          476 GV  477 (529)
Q Consensus       476 ~~  477 (529)
                      +.
T Consensus       359 ~~  360 (361)
T cd06452         359 IA  360 (361)
T ss_pred             Hh
Confidence            53

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=99.92  E-value=5.9e-23  Score=212.44  Aligned_cols=317  Identities=15%  Similarity=0.145  Sum_probs=216.0

Q ss_pred             ceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HH
Q 009673          104 SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA  180 (529)
Q Consensus       104 ~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A  180 (529)
                      .+.|..+++.  +|+.+.+++...+......+|+.       +...+++    +.++++++++++    +|.+++|+ ++
T Consensus        24 ~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~-------~~~~~lr----~~ia~~~~~~~~----~i~it~G~~~~   88 (351)
T PRK14807         24 KYKMDANETPFELPEEVIKNIQEIVKSSQVNIYPD-------PTAEKLR----EELARYCSVVPT----NIFVGNGSDEI   88 (351)
T ss_pred             eeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCCC-------ccHHHHH----HHHHHHhCCCcc----cEEEecCHHHH
Confidence            4667777764  68999999887664222222322       1123443    667778888875    56678998 78


Q ss_pred             HHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 009673          181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS  260 (529)
Q Consensus       181 ~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s  260 (529)
                      +..++.++++|||+|++++|.|..+.        ......|.  +++.++++ +++.+|++++++.++..++|+|+++++
T Consensus        89 l~~~~~~l~~~gd~Vlv~~p~y~~~~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~~~~~~k~v~l~~p  157 (351)
T PRK14807         89 IHLIMLAFINKGDVVIYPHPSFAMYS--------VYSKIAGA--VEIPVKLK-EDYTYDVGSFIKVIEKYQPKLVFLCNP  157 (351)
T ss_pred             HHHHHHHhcCCCCEEEEeCCChHHHH--------HHHHHcCC--eEEEeecC-CCCCCCHHHHHHHhhccCCCEEEEeCC
Confidence            88888999999999999998765331        12234454  66677776 457899999999997658999999989


Q ss_pred             CCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-c-ccEEEecccccc--cCCCCeEEEeeCCCcchh
Q 009673          261 AYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGV  334 (529)
Q Consensus       261 ~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~-aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~  334 (529)
                      +||+  ..+.+++.++|++++.++|+|++|. ++. .......+. . -.++++|++|++  +|+|.||+++++      
T Consensus       158 ~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~-~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~------  229 (351)
T PRK14807        158 NNPTGSVIEREDIIKIIEKSRGIVVVDEAYF-EFY-GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANE------  229 (351)
T ss_pred             CCCCCCCCCHHHHHHHHHhCCCEEEEeCcch-hhc-ccchHHHhhhCCCEEEEecchHhcccchhceeeeecCH------
Confidence            9987  7789999999999899999999963 332 111111111 1 238889999986  789999999987      


Q ss_pred             HHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceEEEccCC
Q 009673          335 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRP  413 (529)
Q Consensus       335 ~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~~v~~~~  413 (529)
                      ++.+.+.....+.  ..+...+.+ +..+++.   ..+++..+.+.++++.+.+.|.+ .|+.+..+  .+.++|+.+. 
T Consensus       230 ~~~~~~~~~~~~~--~~~~~~q~~-~~~~l~~---~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~--~~~~~~i~~~-  300 (351)
T PRK14807        230 NILKYLNLVKSPY--NINSLSQVI-ALKVLRT---GVLKERVNYILNERERLIKELSKIPGIKVYPS--KTNFILVKFK-  300 (351)
T ss_pred             HHHHHHHHccCCC--CcCHHHHHH-HHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCCCcEECcC--CccEEEEEcC-
Confidence            6777665543222  122333332 2223432   34567777788888889999977 48776543  2456677664 


Q ss_pred             CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          414 MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       414 ~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                         +.+++.+.|.++||.|...    ......++++||++.       ..++++++.+.|++++
T Consensus       301 ---~~~~~~~~l~~~gV~v~~~----~~~~~~~~~iRis~~-------~~~~~~~l~~~l~~~~  350 (351)
T PRK14807        301 ---DADYVYQGLLERGILVRDF----SKVEGLEGALRITVS-------SCEANDYLINGLKELL  350 (351)
T ss_pred             ---CHHHHHHHHHHCCEEEEEC----CCCCCCCCeEEEEcC-------CHHHHHHHHHHHHHhh
Confidence               4567888888899999542    111123578999964       2688999998887653

>PRK06855 aminotransferase; Validated

Probab=99.92  E-value=6.8e-23  Score=217.71  Aligned_cols=346  Identities=16%  Similarity=0.119  Sum_probs=216.0

Q ss_pred             cceeEecCCC-----CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673          103 KSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG  177 (529)
Q Consensus       103 ~~i~L~asen-----~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG  177 (529)
                      +.+.+..++.     .+|+.+.+++...+.+.-..+|+.   ..|   ..++.+...+++.+.+|++.+.  -+|.+|+|
T Consensus        33 ~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~---~~G---~~~LReaia~~~~~~~g~~~~~--~~I~it~G  104 (433)
T PRK06855         33 KITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCP---TKG---VLETREFLAELNNKRGGAQITP--DDIIFFNG  104 (433)
T ss_pred             cccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCC---CCC---CHHHHHHHHHHHHhccCCCCCH--hHEEEcCc
Confidence            4577765554     568888888877654321123322   112   3456656668888777765321  26778999


Q ss_pred             H-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhc-CCcE
Q 009673          178 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF-RPKL  254 (529)
Q Consensus       178 s-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~-~pkl  254 (529)
                      + +|+..++. +++|||.|++.+|.|.++...       .....|  .+++.++++++ ++.+|+++|++.++.. ++++
T Consensus       105 ~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~-------~~~~~g--~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~  174 (433)
T PRK06855        105 LGDAIAKIYG-LLRREARVIGPSPAYSTHSSA-------EAAHAG--YPPVTYRLDPENNWYPDLDDLENKVKYNPSIAG  174 (433)
T ss_pred             HHHHHHHHHH-hcCCCCeEEEeCCCCchHHHH-------HHHhcC--CeEEEEecccccCCCCCHHHHHHHHhcCCCceE
Confidence            8 88887764 889999999999988653210       011223  36677777643 4689999999998742 5788


Q ss_pred             EEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC----C-cccEEEecccccc--cCCCCe
Q 009673          255 IIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF----K-YCDVVTTTTHKSL--RGPRGG  322 (529)
Q Consensus       255 Ii~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~----~-~aDiv~~S~hK~l--~GprgG  322 (529)
                      +++++|+||+  ..   .+++|.++|++||++||+|++ |..+.+.+....++    + +..|+++|++|++  +|+|.|
T Consensus       175 i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~-Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG  253 (433)
T PRK06855        175 ILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEI-YNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCG  253 (433)
T ss_pred             EEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc-ccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEE
Confidence            8888899997  34   467788889999999999998 45555543211222    1 1238889999987  799999


Q ss_pred             EEEeeCCC--cchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHHHhc-CcEEe
Q 009673          323 MIFFKKDP--VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-SPEFKVYQNKVVSNCRALASRLVEL-GYKLV  398 (529)
Q Consensus       323 ~i~~~~~~--~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~  398 (529)
                      |++++...  .....+.+.+...... ..+.+...+ .++..+++.-. ....++..+.+.++++.+.+.|.+. |+.+.
T Consensus       254 ~ii~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Q-~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~  331 (433)
T PRK06855        254 WIEVYNADKDEVFKKYINSILNAKMI-EVCSTTLPQ-MAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVN  331 (433)
T ss_pred             EEEEeCCchhhHHHHHHHHHHHhhcc-ccCCChHHH-HHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecc
Confidence            99984310  0000223333222111 112223323 33333443210 1123566777888888999999774 76654


Q ss_pred             cCCCCCceEEEccCCCC--------------------------CcH-HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEE
Q 009673          399 SGGSDNHLVLVDLRPMG--------------------------IDG-ARVEKILDMASITLNKNSVPGDKSALVPGGIRI  451 (529)
Q Consensus       399 ~~gt~~~~~~v~~~~~~--------------------------i~~-~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRi  451 (529)
                      .+ ..++++|++++..-                          .+. +.+..+|+++||.+    +||+.......++||
T Consensus       332 ~p-~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v----~PG~~F~~~~~~~Rl  406 (433)
T PRK06855        332 RT-NGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICV----VPLSSFCTELNGFRV  406 (433)
T ss_pred             CC-CeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEE----ecCCcCCCCCCceEE
Confidence            43 23567788885320                          112 33456678999999    566542112346999


Q ss_pred             ccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          452 GSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       452 g~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      ++..     .+++++++..+.|.+++..
T Consensus       407 s~~~-----~~~~~i~~~~~~l~~~~~~  429 (433)
T PRK06855        407 TLLE-----RDEEKFEWIYQTLAEKIEE  429 (433)
T ss_pred             EECC-----CcHHHHHHHHHHHHHHHHH
Confidence            9753     3479999999999888763

>PRK14012 cysteine desulfurase; Provisional

Probab=99.92  E-value=6.1e-23  Score=216.36  Aligned_cols=340  Identities=15%  Similarity=0.174  Sum_probs=219.6

Q ss_pred             cCCCCCcHHHHHHHhhhhh--ccCCCCCCCCCCC-CCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHH
Q 009673          109 ASENFTSRAVMEAVGSCLT--NKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY  185 (529)
Q Consensus       109 asen~~~~~V~eal~~~l~--~~y~~G~p~~r~~-~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l  185 (529)
                      ++..++|+.|++++...+.  +.+.  .++.+.. .+....+.++ .+++++++++|++++++   +...+|++++..++
T Consensus        10 a~~~~~~~~v~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~r~~ia~~~g~~~~~v---~~~~g~t~al~~~l   83 (404)
T PRK14012         10 SATTPVDPRVAEKMMPYLTMDGTFG--NPASRSHRFGWQAEEAVD-IARNQIADLIGADPREI---VFTSGATESDNLAI   83 (404)
T ss_pred             cCCCCCCHHHHHHHHHHHHhcccCc--CCCchhhHHHHHHHHHHH-HHHHHHHHHcCcCcCeE---EEeCCHHHHHHHHH
Confidence            3456889999999988775  4442  2322111 1111112233 45688999999987532   33455668988887


Q ss_pred             Hhh----cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 009673          186 TAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA  261 (529)
Q Consensus       186 ~al----l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~  261 (529)
                      .++    .++||+|++.+++|.+......     .+...|.  +++.++++ +++.+|+++|++++++ ++++|++...+
T Consensus        84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~-----~~~~~g~--~~~~v~~~-~~g~~d~~~l~~~i~~-~t~lv~~~~~~  154 (404)
T PRK14012         84 KGAAHFYQKKGKHIITSKTEHKAVLDTCR-----QLEREGF--EVTYLDPQ-SNGIIDLEKLEAAMRD-DTILVSIMHVN  154 (404)
T ss_pred             HHHHHhhcCCCCEEEEecCccHHHHHHHH-----HHHhCCC--EEEEEccC-CCCcCCHHHHHHhcCC-CCEEEEEECcC
Confidence            766    3799999999888765432211     1112354  56666666 4688999999999987 89999888776


Q ss_pred             CCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHh
Q 009673          262 YPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES  338 (529)
Q Consensus       262 ~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~  338 (529)
                      |++  ..|+++|.++|+++|+++++|++|+.|....+...   .++|++++|+||.+ ||.| |+++++++      ...
T Consensus       155 n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~---~~~D~~~~s~~K~~-gp~g~G~l~~~~~------~~~  224 (404)
T PRK14012        155 NEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSK---LKVDLMSFSAHKIY-GPKGIGALYVRRK------PRV  224 (404)
T ss_pred             CCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCccc---CCCCEEEEehhhcc-CCCceEEEEEecC------CCC
Confidence            655  78999999999999999999999988765433221   15899999999955 7777 88888874      111


Q ss_pred             hhccccc------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCC--CCCceEEE
Q 009673          339 AINNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGG--SDNHLVLV  409 (529)
Q Consensus       339 ~i~~~~~------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~g--t~~~~~~v  409 (529)
                      ++.....      ....|+++...+.++..+++... .+..+..++..+.++++.+.|++ .++.+....  ...+..++
T Consensus       225 ~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~  303 (404)
T PRK14012        225 RLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAK-EEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNV  303 (404)
T ss_pred             CCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEE
Confidence            2211100      01245677888888887887654 34566777888888888888877 456654321  11222222


Q ss_pred             ccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC------------CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          410 DLRPMGIDGARVEKILDMASITLNKNSVPGDK------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       410 ~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~------------~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      .+..  .+.+.+...|++.+|.....+.|...            .....+.|||+++..+    +++|++++++.|++++
T Consensus       304 ~~~~--~~~~~~~~~l~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~----t~~dvd~~~~~l~~~~  377 (404)
T PRK14012        304 SFNY--VEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFT----TEEEIDYAIELVRKSI  377 (404)
T ss_pred             EEeC--cCHHHHHHhCCCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCC----CHHHHHHHHHHHHHHH
Confidence            2221  13456666676444443322223211            0112468999988765    4899999999999987


Q ss_pred             HHH
Q 009673          478 EIT  480 (529)
Q Consensus       478 ~~~  480 (529)
                      ...
T Consensus       378 ~~~  380 (404)
T PRK14012        378 GKL  380 (404)
T ss_pred             HHH
Confidence            754

>PRK08363 alanine aminotransferase; Validated

Probab=99.92  E-value=1.3e-22  Score=213.41  Aligned_cols=336  Identities=16%  Similarity=0.102  Sum_probs=214.8

Q ss_pred             cceeEecCCC-----CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673          103 KSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG  177 (529)
Q Consensus       103 ~~i~L~asen-----~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG  177 (529)
                      +.|+|..++.     .+++.+.+++...+.+.. ..|      +......++++...+++...+|...+.  .+|.+++|
T Consensus        31 ~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~-~~Y------~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~it~G  101 (398)
T PRK08363         31 KVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGH-NYY------GPSEGLPELREAIVKREKRKNGVDITP--DDVRVTAA  101 (398)
T ss_pred             CeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCC-CCC------CCCCCcHHHHHHHHHHHHHhcCCCCCh--hhEEEeCC
Confidence            5688887664     368889999987764321 112      212224566666667776666643221  25666888


Q ss_pred             H-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEc-ccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673          178 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDESTGLVDYDMLEKTAILFRPKLI  255 (529)
Q Consensus       178 s-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~-~v~~~~~~iD~d~le~~i~~~~pklI  255 (529)
                      + +|+..++.++++|||+|++++|.|.++..        .+...|.  +++.+ +++++++.+|++++++.+++ ++++|
T Consensus       102 ~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~v~~~~~~~~~~~~d~~~l~~~~~~-~~~~v  170 (398)
T PRK08363        102 VTEALQLIFGALLDPGDEILIPGPSYPPYTG--------LVKFYGG--VPVEYRTIEEEGWQPDIDDIRKKITE-KTKAI  170 (398)
T ss_pred             HHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCC--EEEEeccccccCCcCCHHHHHhhCCc-ceEEE
Confidence            6 89999999999999999999998765431        2233443  55555 45545678999999999877 78999


Q ss_pred             EEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC--CCcc--cEEEecccccc--cCCCCeEE
Q 009673          256 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FKYC--DVVTTTTHKSL--RGPRGGMI  324 (529)
Q Consensus       256 i~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~--~~~a--Div~~S~hK~l--~GprgG~i  324 (529)
                      ++++|+||+  ..+   +++|.++|+++|+++|+|+++. .+.+.+.....  +...  -+++.|+||++  +|.|.||+
T Consensus       171 ~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~  249 (398)
T PRK08363        171 AVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYD-LMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYI  249 (398)
T ss_pred             EEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhh-hhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEE
Confidence            999889987  344   8899999999999999999854 44433211111  1111  26679999984  78899999


Q ss_pred             Ee--eCCCcchhHHHhhhccccc---CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEe
Q 009673          325 FF--KKDPVLGVELESAINNAVF---PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLV  398 (529)
Q Consensus       325 ~~--~~~~~~~~~l~~~i~~~~~---p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~  398 (529)
                      ++  ++      ++.+.+.....   ....+.....+.+ +..+|.. .....++..+++.++++.+.+.|.+. |+.+.
T Consensus       250 ~~~~~~------~~~~~l~~~~~~~~~~~~~~s~~~q~~-~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~  321 (398)
T PRK08363        250 YFVDPE------GKLAEVREAIDKLARIRLCPNTPAQFA-AIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGISTT  321 (398)
T ss_pred             EEeCcH------HHHHHHHHHHHHHhcccccCChHHHHH-HHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCEec
Confidence            98  43      33333322110   0001222222222 2334432 12234677788889999999999875 77765


Q ss_pred             cCCCCCceEEEccCCCC-CcH-HHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          399 SGGSDNHLVLVDLRPMG-IDG-ARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       399 ~~gt~~~~~~v~~~~~~-i~~-~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      .+ ..+++.|+.+.... .+. +.+.++|+++||.+.    ||.. +...++++||++.      .+++++++..+.|.+
T Consensus       322 ~p-~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~----~g~~f~~~~~~~iRis~~------~~~~~l~~~l~~l~~  390 (398)
T PRK08363        322 KP-QGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFV----HGSGFGEYGAGHFRLVFL------PPVEILEEAMDRFEE  390 (398)
T ss_pred             CC-CeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEe----CchhhCCCCCCeEEEEec------CCHHHHHHHHHHHHH
Confidence            43 23455555664311 133 445677899999994    4443 2223578999963      247889988888887


Q ss_pred             HHH
Q 009673          476 GVE  478 (529)
Q Consensus       476 ~~~  478 (529)
                      ++.
T Consensus       391 ~~~  393 (398)
T PRK08363        391 FMR  393 (398)
T ss_pred             HHH
Confidence            665

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.92  E-value=9.7e-23  Score=214.28  Aligned_cols=294  Identities=19%  Similarity=0.145  Sum_probs=190.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCC--CCEEEEcCCCCCcccccccccccccccccc--
Q 009673          147 DELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKP--HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS--  221 (529)
Q Consensus       147 d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~p--GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g--  221 (529)
                      .++.+.+++++++++|++.++  +.+. .+|+ +++.+++.+++++  ||+|+++++.|+++...        +...+  
T Consensus        63 ~~~~~~~~~~la~~~g~~~~~--v~~~-~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~--------~~~~~~~  131 (398)
T cd00613          63 LQALFELQTMLCELTGMDVAN--ASLQ-DEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAV--------ARTRGEP  131 (398)
T ss_pred             HHHHHHHHHHHHHHHCCCccc--eecc-CchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHH--------HHHhccc
Confidence            355556678999999998643  3333 4455 5666666677776  99999999988766321        12222  


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-CCCH-HHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDY-PRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~~d~-~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      ...+++.++++ +++.+|++++++.+.+ ++++|++++++..+ ..|+ ++|+++|+++|+++|+|++|..+....... 
T Consensus       132 ~g~~~~~v~~~-~~~~~d~~~l~~~i~~-~t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~-  208 (398)
T cd00613         132 LGIEVVEVPSD-EGGTVDLEALKEEVSE-EVAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPG-  208 (398)
T ss_pred             CCcEEEEeccC-CCCCcCHHHHHHhcCC-CeEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChH-
Confidence            01255566664 3568999999999987 89999888665333 5565 999999999999999999886654221110 


Q ss_pred             CCCCcccEEEecccccc-----cCCCCeEEEeeCCCcchhHHHhhhccc-----------------------------cc
Q 009673          300 DPFKYCDVVTTTTHKSL-----RGPRGGMIFFKKDPVLGVELESAINNA-----------------------------VF  345 (529)
Q Consensus       300 ~~~~~aDiv~~S~hK~l-----~GprgG~i~~~~~~~~~~~l~~~i~~~-----------------------------~~  345 (529)
                        ..++|++++|+|||+     .||++|++++++      ++.+.+...                             ..
T Consensus       209 --~~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~  280 (398)
T cd00613         209 --EYGADIVVGNLQKTGVPHGGGGPGAGFFAVKK------ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKAT  280 (398)
T ss_pred             --HcCCCEEEeeccccCCCCCCCCCceeEEEEhh------hhHhhCCCCeeccccccCCCcceEEecccchhhccccccc
Confidence              115899999999997     247789999987      344332110                             00


Q ss_pred             CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCC-CCcHHHHHHh
Q 009673          346 PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM-GIDGARVEKI  424 (529)
Q Consensus       346 p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~-~i~~~~~~~~  424 (529)
                      +.+.++ .....++.+.++......++++..+++.++++++.+.|++.+......+...+.+++++... +.+..++.+.
T Consensus       281 ~~~~~~-~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~  359 (398)
T cd00613         281 SNICTG-QALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLYGIRAEDLAKA  359 (398)
T ss_pred             ccceec-HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCeeEEEEEEcCCcchHHHHHHHHh
Confidence            001111 12222223334555555567888899999999999999986554322221223345555421 3455678888


Q ss_pred             HhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673          425 LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI  473 (529)
Q Consensus       425 L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i  473 (529)
                      |.+.||.+.... |     ..++.||++.+.++|    ++|++++++.|
T Consensus       360 L~~~gi~~~~~~-~-----~~~~~lRis~~~~~t----~edid~~~~~L  398 (398)
T cd00613         360 LIDGGFHAPTMY-L-----PVDGTLMIEPTETET----KEELDALLEAL  398 (398)
T ss_pred             hhhcCccccccc-c-----CCCCeEEEEcCCCCC----HHHHHHHHHhC
Confidence            888999874321 1     135789999877654    89999998764

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>PRK09148 aminotransferase; Validated

Probab=99.92  E-value=2.3e-22  Score=212.05  Aligned_cols=340  Identities=14%  Similarity=0.099  Sum_probs=213.8

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      ..|+|..+++.  +++.+++++...+.+....+|+.   ..|   ..++++...+++.+.+|.+.+. .-+|.+|+|+ +
T Consensus        31 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~lr~aia~~~~~~~g~~~~~-~~~I~it~G~~~  103 (405)
T PRK09148         31 DIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSA---SKG---IPGLRRAQAAYYARRFGVKLNP-DTQVVATLGSKE  103 (405)
T ss_pred             CeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCC---CCC---CHHHHHHHHHHHHHHhCCCCCC-CCcEEEcCChHH
Confidence            45788776653  46888888876653221123332   112   2355556667777777764221 0156779988 9


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCC-CCCCHHHHHHHhhhcCCcEEEEc
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~-~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      ++..++.++++|||+|++++|.|.++..        .....|.  ++++++++.++ +..+++++.+...+ ++++|+++
T Consensus       104 al~~~~~~l~~~gd~Vl~~~P~y~~~~~--------~~~~~g~--~v~~v~~~~~~~~~~~l~~~~~~~~~-~~~~v~l~  172 (405)
T PRK09148        104 GFANMAQAITAPGDVILCPNPSYPIHAF--------GFIMAGG--VIRSVPAEPDEEFFPALERAVRHSIP-KPIALIVN  172 (405)
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcccHH--------HHHhcCC--EEEEEeCCCCCCCccCHHHHHhhccc-cceEEEEe
Confidence            9999999999999999999998765421        1233454  66666665433 44455544433334 78999999


Q ss_pred             CCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccc-cCCC--CC---cccEEEecccccc--cCCCCeEEE
Q 009673          259 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADP--FK---YCDVVTTTTHKSL--RGPRGGMIF  325 (529)
Q Consensus       259 ~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~--~~---~aDiv~~S~hK~l--~GprgG~i~  325 (529)
                      .|+||+  ..+   +++|.++|++||++||+|+++ ..+.+.+. .++.  ++   ...+++.|++|.+  +|+|.||++
T Consensus       173 ~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y-~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v  251 (405)
T PRK09148        173 YPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAY-SEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAV  251 (405)
T ss_pred             CCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccc-hhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeee
Confidence            999997  444   467888999999999999984 44443221 1111  11   1236689999986  789999999


Q ss_pred             eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc
Q 009673          326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH  405 (529)
Q Consensus       326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~  405 (529)
                      +++      ++.+.+.........+.+...+.++ ..+|.. .....+..++++.++++.+.+.|.+.|+.+..+ ..+.
T Consensus       252 ~~~------~~i~~l~~~~~~~~~~~~~~~q~~~-~~~L~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p-~~g~  322 (405)
T PRK09148        252 GNE------RLIAALTRVKSYLDYGAFTPIQVAA-TAALNG-PQDCIAEMRELYKKRRDVLVESFGRAGWDIPPP-AASM  322 (405)
T ss_pred             CCH------HHHHHHHHHHHHhccCCChHHHHHH-HHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCC-CeeE
Confidence            987      6777665432211122222333332 223432 112346677888999999999999888865543 2356


Q ss_pred             eEEEccCCC--CCcHHHHH-HhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          406 LVLVDLRPM--GIDGARVE-KILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       406 ~~~v~~~~~--~i~~~~~~-~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      ++|++++..  .++..++. .+|++.||.|.    ||.. +...++++||++.      ..++++++..+.|.+++...
T Consensus       323 f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~----pg~~f~~~~~~~~Ri~~~------~~~~~l~~al~~l~~~l~~~  391 (405)
T PRK09148        323 FAWAPIPEAFRHLGSLEFSKLLVEKADVAVA----PGVGFGEHGDGYVRIALV------ENEQRIRQAARNIKRFLSSA  391 (405)
T ss_pred             EEEEECCCccCCCCHHHHHHHHHHhCCEEEe----CchhhCCCCCCeEEEEec------CCHHHHHHHHHHHHHHHHHH
Confidence            678777532  12344554 45678999994    4443 1123578999874      23688888888887777543

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=99.92  E-value=1.1e-22  Score=212.50  Aligned_cols=330  Identities=17%  Similarity=0.196  Sum_probs=216.1

Q ss_pred             cceeEecCCC--C-CcHHHHHHHhhhhhccCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673          103 KSLELIASEN--F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS  178 (529)
Q Consensus       103 ~~i~L~asen--~-~~~~V~eal~~~l~~~y~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs  178 (529)
                      +.|++..+++  + .+|.|++++...+. +|..+++..+...|. +..++    .++++++++|.+.     .+.+++|+
T Consensus        40 ~~id~~~~~~~g~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~~----l~~~la~~~~~~~-----~i~~~~g~  109 (385)
T PRK05958         40 RMLNFASNDYLGLARHPRLIAAAQQAAR-RYGAGSGGSRLVTGNSPAHEA----LEEELAEWFGAER-----ALLFSSGY  109 (385)
T ss_pred             eEEEeeCCCcccCCCCHHHHHHHHHHHH-hcCCCCCCcCcccCCcHHHHH----HHHHHHHHhCCCc-----EEEECcHH
Confidence            5577877764  3 57899999988774 344333333322222 22233    4477888888532     45668888


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEE
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLII  256 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi  256 (529)
                      +++..++.++++|||+|++.++.|+++..        .....|.  +++.++      ..|++++++.++..  ++.+++
T Consensus       110 ~~~~~~l~~~~~~gd~V~~~~~~~~~~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~i~~~~~~~~lvi  173 (385)
T PRK05958        110 AANLAVLTALAGKGDLIVSDKLNHASLID--------GARLSRA--RVRRYP------HNDVDALEALLAKWRAGRALIV  173 (385)
T ss_pred             HHHHHHHHHhCCCCCEEEEeCccCHHHHH--------HHHhcCC--ceEEeC------CCCHHHHHHHHHhccCCCeEEE
Confidence            88888888889999999999988765432        2233443  344433      24889999988763  245566


Q ss_pred             EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccc-cc-cCC--CCC-c-ccEEEecccccccCCCCeEEEeeC
Q 009673          257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV-VAD--PFK-Y-CDVVTTTTHKSLRGPRGGMIFFKK  328 (529)
Q Consensus       257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~~-~~~--~~~-~-aDiv~~S~hK~l~GprgG~i~~~~  328 (529)
                      ++.+.+++  ..++++|+++|++||+++|+|++|..|.... +. ...  .+. . .++++.|+||++ |+.||+++.++
T Consensus       174 ~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~Gg~~~~~~  252 (385)
T PRK05958        174 TESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKAL-GSSGAAVLGSE  252 (385)
T ss_pred             EEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhc-ccCCcEEEcCH
Confidence            65554443  6789999999999999999999987665431 11 010  122 2 348889999998 66789998886


Q ss_pred             CCcchhHHHhhhcccccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673          329 DPVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV  407 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~  407 (529)
                            ++.+.+.....+.. .++++..+++++..+++.....  +...+++.++++.+.+.|++.|+++..+  .+.++
T Consensus       253 ------~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~  322 (385)
T PRK05958        253 ------TLIDYLINRARPFIFTTALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRALGFQLMDS--QSAIQ  322 (385)
T ss_pred             ------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCcCCC--CCCEE
Confidence                  56665543222222 2334455555555677655332  4667888899999999999888876553  23455


Q ss_pred             EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      ++.+.. ..+..++.+.|.+.||.+.....|.  .+..+.++||+.+..    .+++|++++++.|+++
T Consensus       323 ~~~~~~-~~~~~~~~~~l~~~gI~v~~~~~~~--~~~~~~~lRis~~~~----~~~~~i~~~l~~l~~~  384 (385)
T PRK05958        323 PLIVGD-NERALALAAALQEQGFWVGAIRPPT--VPAGTSRLRITLTAA----HTEADIDRLLEALAEA  384 (385)
T ss_pred             EEEeCC-HHHHHHHHHHHHHCCceEecccCCC--CCCCCceEEEEecCC----CCHHHHHHHHHHHHhc
Confidence            665532 2345668888888999996432221  112346899997643    3589999999999765

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.92  E-value=3.9e-23  Score=215.83  Aligned_cols=324  Identities=15%  Similarity=0.162  Sum_probs=211.7

Q ss_pred             CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cC
Q 009673          112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LK  190 (529)
Q Consensus       112 n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~  190 (529)
                      ...+++.++++...+.+.+.        +. .+...++|    +.+++++|.+.     .|.++||++|+.+++.++ ++
T Consensus        10 p~~~~~e~~~~~~~l~~~~~--------~~-g~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~lal~al~~~   71 (379)
T PRK11658         10 PAMGDEELAAVKEVLRSGWI--------TT-GPKNQALE----QAFCQLTGNQH-----AIAVSSATAGMHITLMALGIG   71 (379)
T ss_pred             CCCCHHHHHHHHHHHHcCCc--------cC-CHhHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCC
Confidence            33456667777766654331        11 24467777    67889999874     255688899999999999 89


Q ss_pred             CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHH
Q 009673          191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPR  270 (529)
Q Consensus       191 pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~  270 (529)
                      |||+|++++++|.+...        .+...|.  +++.++++++++.+|++++++.+++ ++|+|+..++ ++...|+++
T Consensus        72 ~Gd~Viv~~~~~~~~~~--------~~~~~G~--~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~~~~~-~G~~~d~~~  139 (379)
T PRK11658         72 PGDEVITPSLTWVSTLN--------MIVLLGA--TPVMVDVDRDTLMVTPEAIEAAITP-RTKAIIPVHY-AGAPADLDA  139 (379)
T ss_pred             CCCEEEECCCcHHHHHH--------HHHHcCC--EEEEEecCCCcCCcCHHHHHHhccc-CCeEEEEeCC-CCCcCCHHH
Confidence            99999999987765421        2334555  7777778766778999999999987 8998886543 445789999


Q ss_pred             HHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcccccCCC--
Q 009673          271 MRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL--  348 (529)
Q Consensus       271 i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~--  348 (529)
                      |.++|+++|++||+|++|..|....+...... +.++++++.+|.+++++||+++++++     ++.++++.....+.  
T Consensus       140 i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~-g~~~~Sf~~~K~l~~g~GG~v~~~~~-----~~~~~~~~~~~~G~~~  213 (379)
T PRK11658        140 IRAIGERYGIPVIEDAAHAVGTYYKGRHIGAR-GTAIFSFHAIKNITCAEGGLVVTDDD-----ELADRLRSLKFHGLGV  213 (379)
T ss_pred             HHHHHHHcCCeEEEECCCccCCeECCeecCCC-CCEEEeCCCCCcCcccCceEEEECCH-----HHHHHHHHHHHcCCCc
Confidence            99999999999999999998877654222111 34677778889999999999998764     55444432111110  


Q ss_pred             ------------------CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEe-cCCC---CC-c
Q 009673          349 ------------------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV-SGGS---DN-H  405 (529)
Q Consensus       349 ------------------~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~-~~gt---~~-~  405 (529)
                                        .|. + ..+..+.+|+...+...+++..++.+++++.+.+.|.+.++..+ .+..   .+ +
T Consensus       214 ~~~~~~~~~~~~~~~~~~~G~-n-~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~  291 (379)
T PRK11658        214 DAFDRQTQGRAPQAEVLTPGY-K-YNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWH  291 (379)
T ss_pred             chhhhhcccCCCcceeecccc-c-cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEE
Confidence                              011 0 11222233333333345677777888888888888877543322 2211   11 3


Q ss_pred             eEEEccCC--CCCcHHHHHHhHhcCCeEEcCCCCCCCCCC-CC--------C-------CeEEEccCCCccCCCCHHHHH
Q 009673          406 LVLVDLRP--MGIDGARVEKILDMASITLNKNSVPGDKSA-LV--------P-------GGIRIGSPAMTTRGFSEKEFV  467 (529)
Q Consensus       406 ~~~v~~~~--~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~-~~--------~-------~~iRig~~~~tt~g~~~~d~~  467 (529)
                      ++.+.+..  .+++.+++.+.|++.||.+...+.|.+..+ +.        +       ..|.  +|.  ..+++++|++
T Consensus       292 ~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~--lP~--~~~l~~~~~~  367 (379)
T PRK11658        292 LFIIRVDEERCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICS--LPL--FPDMTDADVD  367 (379)
T ss_pred             EEEEEECCccccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEE--ccC--CCCCCHHHHH
Confidence            33333322  245778899999999998765444443211 10        0       1222  231  1468899999


Q ss_pred             HHHHHHHHHH
Q 009673          468 AIADFIHEGV  477 (529)
Q Consensus       468 ~la~~i~~~~  477 (529)
                      ++++.|++++
T Consensus       368 ~i~~~i~~~~  377 (379)
T PRK11658        368 RVITALQQIA  377 (379)
T ss_pred             HHHHHHHHHH
Confidence            9999998864

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=99.92  E-value=3.7e-23  Score=214.33  Aligned_cols=320  Identities=18%  Similarity=0.145  Sum_probs=219.5

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.++|..++|+  +|+.+++++...+......+|+.    .|   ..+++    +.+++++|.+.+   .+|.+++|+ +
T Consensus        27 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~----~~---~~~lr----~~ia~~~~~~~~---~~I~~t~G~~~   92 (356)
T PRK04870         27 GMVKLDAMENPYRLPAELRAELGERLAEVALNRYPD----PR---AAALK----AALRAAMGVPAG---ADVLLGNGSDE   92 (356)
T ss_pred             CceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCC----CC---HHHHH----HHHHHHhCcCCC---CcEEEcCCHHH
Confidence            56888888884  68999999987764321123432    01   23333    667788888653   256779998 7


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      ++..++.++++|||+|++++|.|.++.        ..+...|.  ++++++++ +++.+|++++++.+...++++|++++
T Consensus        93 ~i~~~~~~~~~~gd~vlv~~P~y~~~~--------~~~~~~g~--~~~~i~~~-~~~~~d~~~l~~~~~~~~~~~v~l~~  161 (356)
T PRK04870         93 LIQLLALACAKPGATVLAPEPGFVMYR--------MSAKLAGL--EFVGVPLT-ADFTLDLPAMLAAIAEHRPALVFLAY  161 (356)
T ss_pred             HHHHHHHHhcCCCCEEEECCCCHHHHH--------HHHHHcCC--EEEEecCC-CCCCCCHHHHHHHhhcCCCCEEEEcC
Confidence            888888899999999999998765432        12344565  67777776 45789999999998765899999998


Q ss_pred             CCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-c-ccEEEeccccc-ccCCCCeEEEeeCCCcchh
Q 009673          260 SAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-Y-CDVVTTTTHKS-LRGPRGGMIFFKKDPVLGV  334 (529)
Q Consensus       260 s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~-aDiv~~S~hK~-l~GprgG~i~~~~~~~~~~  334 (529)
                      |+||+  ..+.+++.+|++..++++|+|+++. .+......+ .+. . ..+++.|++|+ ++|+|.||+++++      
T Consensus       162 p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~-~~~~~~~~~-~~~~~~~vi~~~S~SK~~~~GlRiG~~i~~~------  233 (356)
T PRK04870        162 PNNPTGNLFDDADVERIIEAAPGLVVVDEAYQ-PFAGDSWLP-RLARFPNLLVMRTVSKLGLAGLRLGYLAGHP------  233 (356)
T ss_pred             CCCCCCCCCCHHHHHHHHHHCCCEEEEECCch-hhcCcchHH-HHhhCCCEEEEecchhhhhHHHhhhhhhCCH------
Confidence            99997  7788888888877789999999853 332211111 111 1 23788999993 3789999999987      


Q ss_pred             HHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEEEccCC
Q 009673          335 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRP  413 (529)
Q Consensus       335 ~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~  413 (529)
                      ++.+++.....+.  +.....+.+ ...+++.  ...+++..+++.++++.+.+.|++. |+.+..+  .+.++|+.+. 
T Consensus       234 ~~i~~~~~~~~~~--~~~~~~q~~-a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~~~~~~~~-  305 (356)
T PRK04870        234 AWIAELDKVRPPY--NVNVLTQAT-ALFALEH--VDVLDAQAAQLRAERTRLAAALAALPGVTVFPS--AANFILVRVP-  305 (356)
T ss_pred             HHHHHHHHccCCC--cCCHHHHHH-HHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCC--CCeEEEEECC-
Confidence            6777766543222  122222222 2223432  1235677788889999999999885 8776543  3456777664 


Q ss_pred             CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          414 MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       414 ~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                         +..++.+.|+++||.|......   ....++++||++.       +.++++++.+.|+++
T Consensus       306 ---~~~~~~~~l~~~gI~v~~~~~f---~~~~~~~iRis~~-------~~~~~~~l~~al~~~  355 (356)
T PRK04870        306 ---DAAAVFDGLKTRGVLVKNLSGM---HPLLANCLRVTVG-------TPEENAQFLAALKAA  355 (356)
T ss_pred             ---CHHHHHHHHHHCCEEEEECCCC---CCCCCCeEEEeCC-------CHHHHHHHHHHHHHh
Confidence               4567888899999999643221   1224578999964       368999999998765

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=99.92  E-value=6.3e-23  Score=214.41  Aligned_cols=317  Identities=17%  Similarity=0.150  Sum_probs=215.3

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.|+|..++|+  +|+.+++++.....   ...||.      . ...++    ++.+++++|++++    +|.+++|+ +
T Consensus        53 ~~i~l~~n~~p~~~~~~v~~a~~~~~~---~~~Yp~------~-~~~~l----r~~ia~~~~~~~~----~I~~t~Ga~~  114 (380)
T PLN03026         53 DIVKLDANENPYGPPPEVLEALGNMKF---PYVYPD------P-ESRRL----RAALAEDSGLESE----NILVGCGADE  114 (380)
T ss_pred             ceEEccCCCCCCCCCHHHHHHHHhhHh---hccCCC------C-CHHHH----HHHHHHHhCcChh----hEEEcCCHHH
Confidence            56889888875  67889998864211   111222      1 12333    4678888998875    56679998 8


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      ++..++.++++|||+|++++|.|+.+.        ......|.  +++.++.+ +++.+|++++++.+...++++|++++
T Consensus       115 ~i~~~~~~~~~~gd~Vlv~~P~y~~y~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~~~~~~~~v~l~~  183 (380)
T PLN03026        115 LIDLLMRCVLDPGDKIIDCPPTFGMYV--------FDAAVNGA--EVIKVPRT-PDFSLDVPRIVEAVETHKPKLLFLTS  183 (380)
T ss_pred             HHHHHHHHhcCCCCEEEEcCCChHHHH--------HHHHHcCC--EEEEeecC-CCCCcCHHHHHHHHhccCCcEEEEeC
Confidence            888888899999999999998764321        12234454  66666665 45789999999998433899999999


Q ss_pred             CCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccc--cCCCCeEEEeeCCCcch
Q 009673          260 SAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLG  333 (529)
Q Consensus       260 s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~  333 (529)
                      |+||+  ..+.+++.+|++.. +++++|+++ ..+...+.....+.  ...+++.|++|.+  +|+|.||+++++     
T Consensus       184 P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY-~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~-----  256 (380)
T PLN03026        184 PNNPDGSIISDDDLLKILELP-ILVVLDEAY-IEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL-----  256 (380)
T ss_pred             CCCCCCCCCCHHHHHHHHhcC-CEEEEECcc-hhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCH-----
Confidence            99997  78999999999864 899999995 33332211111111  1248889999986  799999999987     


Q ss_pred             hHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC-cEEecCCCCCceEEEccC
Q 009673          334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG-YKLVSGGSDNHLVLVDLR  412 (529)
Q Consensus       334 ~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G-~~v~~~gt~~~~~~v~~~  412 (529)
                       ++.+.+.+...+.  +.+...+.+ ...+|+.  ...+++..+++.++++.+.+.|++.+ +.+...  .++++|+++.
T Consensus       257 -~~i~~l~~~~~~~--~~~~~~q~a-a~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~--~~~f~~~~~~  328 (380)
T PLN03026        257 -SIIEYLWRAKQPY--NVSVAAEVA-ACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLEPYPS--DANFILCRVT  328 (380)
T ss_pred             -HHHHHHHHhcCCC--CCCHHHHHH-HHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCeECCC--CCeEEEEECC
Confidence             6777766544332  222232333 3334532  12346777888889999999998865 444332  3567777764


Q ss_pred             CCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          413 PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       413 ~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      . +.+..++.+.|.++||.+...    .. ...++++||++.       +.++++++.+.|+++
T Consensus       329 ~-~~~~~~~~~~l~~~gI~v~~~----~~-~~~~~~lRis~~-------~~~~~~~l~~al~~~  379 (380)
T PLN03026        329 S-GRDAKKLKEDLAKMGVMVRHY----NS-KELKGYIRVSVG-------KPEHTDALMEALKQL  379 (380)
T ss_pred             C-CCCHHHHHHHHHHCCeEEEEC----CC-CCCCCEEEEecC-------CHHHHHHHHHHHHHh
Confidence            3 356677888888999999643    22 123578999864       368999999998753

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=99.92  E-value=1.3e-22  Score=213.42  Aligned_cols=335  Identities=14%  Similarity=0.110  Sum_probs=215.6

Q ss_pred             hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChH
Q 009673          102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGS  178 (529)
Q Consensus       102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs  178 (529)
                      ++.|+|..+++.  +++.+.+++...+...  ..|+.   ..|   ..++.+.+.+++.+.+|.+ .+.- .+|.+++|+
T Consensus        29 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~--~~Y~~---~~G---~~~lr~~ia~~~~~~~g~~~~~~~-~~i~it~G~   99 (396)
T PRK09147         29 LPPISLSIGEPKHPTPAFIKDALAANLDGL--ASYPT---TAG---LPALREAIAAWLERRYGLPALDPA-TQVLPVNGS   99 (396)
T ss_pred             CCeEecCCCCCCCCCCHHHHHHHHHHhhhh--cCCCC---CCC---CHHHHHHHHHHHHHHhCCCcCCcc-ceEEECCCh
Confidence            367888777753  5788888887665321  12332   112   2355556667888888854 2210 156678888


Q ss_pred             -HHHHHHHHhhcCC---CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCc
Q 009673          179 -PANFEVYTAILKP---HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPK  253 (529)
Q Consensus       179 -~A~~~~l~all~p---GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pk  253 (529)
                       +++..++.++++|   ||.|++++|.|.++.        ......|.  ++++++++++ ++.+|++++++.+.+ ++|
T Consensus       100 ~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~--------~~~~~~g~--~~~~vp~~~~~~~~~d~~~l~~~~~~-~~k  168 (396)
T PRK09147        100 REALFAFAQTVIDRDGPGPLVVCPNPFYQIYE--------GAALLAGA--EPYFLNCDPANNFAPDFDAVPAEVWA-RTQ  168 (396)
T ss_pred             HHHHHHHHHHHcCCCCCCCEEEEcCCCccchH--------HHHHhcCC--EEEEeccCccccCccCHHHHHHHHhh-ccE
Confidence             9999999999999   999999999775432        12334554  6777777644 468999999888866 899


Q ss_pred             EEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCC--CCC-----c---cc--EEEeccccc-
Q 009673          254 LIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-----Y---CD--VVTTTTHKS-  315 (529)
Q Consensus       254 lIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~~-----~---aD--iv~~S~hK~-  315 (529)
                      +|++++|+||+  ..   .+++|.++|++|+++||+|+++ ..+.+.+..+.  .+.     +   .+  +++.|++|. 
T Consensus       169 ~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~  247 (396)
T PRK09147        169 LLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECY-SEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRS  247 (396)
T ss_pred             EEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccc-cccccCCCCCCchhhhhccccCccccccEEEEecccccc
Confidence            99999999997  33   5778888899999999999984 34443321111  010     1   12  888999995 


Q ss_pred             -ccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC
Q 009673          316 -LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG  394 (529)
Q Consensus       316 -l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G  394 (529)
                       ++|+|.||+++++      ++.+.+.........+.+...+.+++ .++.  .....++.++++.++++.+.+.|.+. 
T Consensus       248 ~~~GlRiG~~~~~~------~l~~~~~~~~~~~~~~~~~~~q~a~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~L~~~-  317 (396)
T PRK09147        248 NVPGLRSGFVAGDA------ALLKKFLLYRTYHGCAMPPAVQAASI-AAWN--DEAHVRENRALYREKFDAVTPILAPV-  317 (396)
T ss_pred             CCccceeeeecCCH------HHHHHHHHHhhhcccCCCHHHHHHHH-HHhc--chhHHHHHHHHHHHHHHHHHHHHHHh-
Confidence             5899999999987      67666654321111122222222222 2332  12234667778888888888988774 


Q ss_pred             cEEecCCCCCceEEEccCCCCCcHHHH-HHhHhcCCeEEcCCCCCCCC---CCCCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673          395 YKLVSGGSDNHLVLVDLRPMGIDGARV-EKILDMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVAIA  470 (529)
Q Consensus       395 ~~v~~~gt~~~~~~v~~~~~~i~~~~~-~~~L~~~GI~v~~~~~Pg~~---~~~~~~~iRig~~~~tt~g~~~~d~~~la  470 (529)
                      +.+..+ ..+.++|++++   .+..++ ..+|+++||.+.++...+..   .....+++||++.      ..++++++..
T Consensus       318 ~~~~~p-~~g~f~~~~~~---~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~------~~~~~l~~~l  387 (396)
T PRK09147        318 LDVQLP-DAGFYLWAKVP---GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALV------APLAECVEAA  387 (396)
T ss_pred             cCCCCC-CeeEEEEEECC---CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEec------CCHHHHHHHH
Confidence            444333 23567788875   244555 45557899999544322211   1123578999864      2367888888


Q ss_pred             HHHHHHH
Q 009673          471 DFIHEGV  477 (529)
Q Consensus       471 ~~i~~~~  477 (529)
                      +.|.+++
T Consensus       388 ~rl~~~~  394 (396)
T PRK09147        388 ERIVDFC  394 (396)
T ss_pred             HHHHHHh
Confidence            7777654

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.92  E-value=2.4e-23  Score=215.07  Aligned_cols=295  Identities=18%  Similarity=0.186  Sum_probs=198.7

Q ss_pred             hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673          144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI  222 (529)
Q Consensus       144 ~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~  222 (529)
                      +...++|    +.+++++|.+.     .+.++||++|+..++.++ ++|||+|+++.+.|.+...        .+...|.
T Consensus        18 ~~~~~~~----~~la~~~~~~~-----~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~--------~~~~~g~   80 (352)
T cd00616          18 PKVREFE----KAFAEYLGVKY-----AVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATAN--------AILLLGA   80 (352)
T ss_pred             HHHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHH--------HHHHcCC
Confidence            3455666    67888999753     355678999999999998 6899999999987654321        2333454


Q ss_pred             eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCC
Q 009673          223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF  302 (529)
Q Consensus       223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~  302 (529)
                        +++.++++++++.+|++++++.+++ ++++|++.+ .++...|+++|.++|+++|+++|+|++|..|....+.   ++
T Consensus        81 --~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~---~~  153 (352)
T cd00616          81 --TPVFVDIDPDTYNIDPELIEAAITP-RTKAIIPVH-LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGR---KV  153 (352)
T ss_pred             --eEEEEecCCCcCCcCHHHHHHhcCc-CCeEEEEEC-CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCE---Ec
Confidence              7777777755788999999999976 899988864 3455789999999999999999999999988764332   11


Q ss_pred             C-cccEEEeccc--ccccCCCCeEEEeeCCCcchhHHHhhhcccccCCC-----------CC-CChHHHHHHHHHHHHHh
Q 009673          303 K-YCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL-----------QG-GPHNHTIGGLAVCLKHA  367 (529)
Q Consensus       303 ~-~aDiv~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~-----------~g-~p~~~~iaala~al~~~  367 (529)
                      . ..|+.++|+|  |+++++.||+++++++     ++.+++......+.           .+ +.....+.+ +.++.. 
T Consensus       154 ~~~~d~~~~S~~~~K~~~~~~gg~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-a~~~~~-  226 (352)
T cd00616         154 GTFGDAGAFSFHPTKNLTTGEGGAVVTNDE-----ELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQA-AIGLAQ-  226 (352)
T ss_pred             ccCcceeEEcCCCCCCCcccCceEEEECCH-----HHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHH-HHHHHH-
Confidence            1 3678888866  9998888999988763     45444332111110           00 001111111 112221 


Q ss_pred             cCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCC----CCceEEEccCCC-CCcHHHHHHhHhcCCeEEcCCCCCCCC
Q 009673          368 QSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGS----DNHLVLVDLRPM-GIDGARVEKILDMASITLNKNSVPGDK  441 (529)
Q Consensus       368 ~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt----~~~~~~v~~~~~-~i~~~~~~~~L~~~GI~v~~~~~Pg~~  441 (529)
                       ...+++..++..++++++.+.|.+ .|++++.+..    ..+.+.+.+... +.+.+++.+.|++.||.++....|...
T Consensus       227 -l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~~~~~~~  305 (352)
T cd00616         227 -LEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHYPPLHH  305 (352)
T ss_pred             -HHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeeecCcccc
Confidence             124567778888999999999988 5888765422    123334444321 457788999999999988755444221


Q ss_pred             CC------------C------CCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673          442 SA------------L------VPGGIRIGSPAMTTRGFSEKEFVAIADFIH  474 (529)
Q Consensus       442 ~~------------~------~~~~iRig~~~~tt~g~~~~d~~~la~~i~  474 (529)
                      .+            +      ..+.|||++...    ++++|++++++.|+
T Consensus       306 ~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~----~t~~di~~i~~~l~  352 (352)
T cd00616         306 QPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPS----LTEEEIDRVIEALR  352 (352)
T ss_pred             CHhhhhccCCCcCCChHHHHHHhCeEEccCCCC----CCHHHHHHHHHHhC
Confidence            00            0      126799988754    55999999999873

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.92  E-value=4.5e-23  Score=215.66  Aligned_cols=322  Identities=18%  Similarity=0.184  Sum_probs=209.5

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCCC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH  192 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~pG  192 (529)
                      .+++.++++...+.+.+        ++. .+..+++|    +.+++++|.+.     .|.++||++|+..++.++ ++||
T Consensus         8 ~~~~~~~~v~~~~~~~~--------~~~-g~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~~~l~al~~~~G   69 (380)
T TIGR03588         8 IDQDDIDAVVEVLKSDF--------LTQ-GPTVPAFE----EALAEYVGAKY-----AVAFNSATSALHIACLALGVGPG   69 (380)
T ss_pred             CCHHHHHHHHHHHhcCC--------ccC-ChhHHHHH----HHHHHHHCCCe-----EEEEcCHHHHHHHHHHHcCCCCC
Confidence            44555666666654432        111 23456666    67888999875     244578999999999999 8999


Q ss_pred             CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEEEEcCCCCCCCCCHH
Q 009673          193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAGASAYPRDFDYP  269 (529)
Q Consensus       193 D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~---~~pklIi~~~s~~p~~~d~~  269 (529)
                      |+|++++++|.+..        ..+...|.  +++.++++++++.+|++++++.+++   .++++|++.++ ++...|++
T Consensus        70 d~Viv~~~~~~~~~--------~~~~~~G~--~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~~-~G~~~~~~  138 (380)
T TIGR03588        70 DRVWTTPITFVATA--------NCALYCGA--KVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVDF-AGKSVDMQ  138 (380)
T ss_pred             CEEEeCCcchHHHH--------HHHHHcCC--EEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEeCC-CCccCCHH
Confidence            99999998765432        12334554  7788888767788999999999982   27898887543 45578999


Q ss_pred             HHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccc--ccccCCCCeEEEeeCCCcchhHHHhhhcccccCC
Q 009673          270 RMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG  347 (529)
Q Consensus       270 ~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~  347 (529)
                      +|.++|+++|++||+|++|+.|....+.......+.|++++|+|  |+++++.||+++++++     ++.++++.....+
T Consensus       139 ~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~-----~~~~~~~~~~~~g  213 (380)
T TIGR03588       139 AIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATVFSFHPVKIITTAEGGAVTTNDE-----ELAERMRLLRSHG  213 (380)
T ss_pred             HHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEEEecCCCCcccccCceEEEECCH-----HHHHHHHHHHHCC
Confidence            99999999999999999999986643311111124699999998  8898889999998774     4554433211000


Q ss_pred             ---------------------CCC-CChHHHH-HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecC--C
Q 009673          348 ---------------------LQG-GPHNHTI-GGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG--G  401 (529)
Q Consensus       348 ---------------------~~g-~p~~~~i-aala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~--g  401 (529)
                                           ..| +..+..+ +++  ++.++  ..+++..++.+++++++.+.|.+. ++.+...  +
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~--g~~qL--~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~  289 (380)
T TIGR03588       214 ITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAAL--GLSQL--KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLG  289 (380)
T ss_pred             CCCCcccccccccCcceeeeeccccccCccHHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCC
Confidence                                 001 0111122 222  22222  235677788888899999999874 3443322  1


Q ss_pred             C--CCceEEEccCC-CCCcHHHHHHhHhcCCeEEcCCCCCCCCCC-C--------CC-------CeEEEccCCCccCCCC
Q 009673          402 S--DNHLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDKSA-L--------VP-------GGIRIGSPAMTTRGFS  462 (529)
Q Consensus       402 t--~~~~~~v~~~~-~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~-~--------~~-------~~iRig~~~~tt~g~~  462 (529)
                      .  ..+.+.+.+.. .+.+.+++.+.|.+.||.++..+.|.+..+ +        .+       ..|++..+.    .++
T Consensus       290 ~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~----~l~  365 (380)
T TIGR03588       290 SKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHP----ALT  365 (380)
T ss_pred             CEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCC----CCC
Confidence            1  11333333332 345778899999999999876554533110 0        01       346665432    467


Q ss_pred             HHHHHHHHHHHHHHH
Q 009673          463 EKEFVAIADFIHEGV  477 (529)
Q Consensus       463 ~~d~~~la~~i~~~~  477 (529)
                      ++|++++++.|++++
T Consensus       366 ~~dv~~i~~~l~~~~  380 (380)
T TIGR03588       366 LEQQQRVVETLRKVL  380 (380)
T ss_pred             HHHHHHHHHHHHHhC
Confidence            999999999998763

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>PLN02483 serine palmitoyltransferase

Probab=99.92  E-value=1e-22  Score=218.73  Aligned_cols=320  Identities=18%  Similarity=0.182  Sum_probs=206.5

Q ss_pred             cHHHHHHHhhhhhccCCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCC
Q 009673          115 SRAVMEAVGSCLTNKYSEGLPGKRY-YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD  193 (529)
Q Consensus       115 ~~~V~eal~~~l~~~y~~G~p~~r~-~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD  193 (529)
                      ++++.+++.     +|..+..+.|. |+....+.++|    +.+++++|.+.     .|.+++|+.+|..++.++++|||
T Consensus       121 ~~~~~~ai~-----~~g~~~~~sr~~~g~~~~~~ele----~~lA~~~g~~~-----ai~~~~G~~an~~~i~al~~~Gd  186 (489)
T PLN02483        121 TPRVIESLK-----KYSASTCSSRVDGGTTKLHRELE----ELVARFVGKPA-----AIVFGMGYATNSTIIPALIGKGG  186 (489)
T ss_pred             HHHHHHHHH-----HhCCCCCccccccCCcHHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHhCCCCC
Confidence            345555543     35445556664 33355666666    77889999764     35668999999999999999999


Q ss_pred             EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc------CC-----cEEEEcCCC-
Q 009673          194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF------RP-----KLIIAGASA-  261 (529)
Q Consensus       194 ~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~------~p-----klIi~~~s~-  261 (529)
                      .|++.++.|.+...        .+...|.  +++.++.+      |.+++++.+++.      ++     +++++..+. 
T Consensus       187 ~Vi~d~~~h~s~~~--------~~~~~Ga--~v~~~~~~------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~  250 (489)
T PLN02483        187 LIISDSLNHNSIVN--------GARGSGA--TIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIY  250 (489)
T ss_pred             EEEEcchhhHHHHH--------HHHHcCC--eEEEEeCC------CHHHHHHHHHhhhhccccccccCCceEEEEECCCC
Confidence            99999998866532        2344565  55555432      456665554320      22     555554333 


Q ss_pred             --CCCCCCHHHHHHHHHHhCCEEEEecccccccccc-c--cc-CCCC--CcccEEEecccccccCCCCeEEEeeCCCcch
Q 009673          262 --YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--VV-ADPF--KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLG  333 (529)
Q Consensus       262 --~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~--~~-~~~~--~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~  333 (529)
                        .+...++++|.++|++||++|++|++|..|.... +  .. ...+  ...||+++|+||++ |+.|||+++++     
T Consensus       251 s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~-g~~GG~i~~~~-----  324 (489)
T PLN02483        251 SMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSF-GSCGGYIAGSK-----  324 (489)
T ss_pred             CCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhc-ccCceEEEcCH-----
Confidence              2347899999999999999999999997664321 1  00 0111  25789999999998 56789999887     


Q ss_pred             hHHHhhhcccccCCC-CCCChHHHHHHHHHHHHHhcCc----hHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEE
Q 009673          334 VELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSP----EFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL  408 (529)
Q Consensus       334 ~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~----~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~  408 (529)
                       ++.+.+........ .++.+...+++...+|+.+...    ...+..+++.++++++.+.|++.|+.+..+ .+++.++
T Consensus       325 -~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~~~-~~sp~~~  402 (489)
T PLN02483        325 -ELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVLGD-NDSPVMP  402 (489)
T ss_pred             -HHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCcccCC-CCCCEEE
Confidence             67777765322211 2222333444444566644321    235667889999999999999999876643 2233333


Q ss_pred             EccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          409 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +-+.. ..+...+.+.|.+.||.+.....|.  .+...+.+||++.+.    .+++|++++++.|++++..
T Consensus       403 l~l~~-~~~~~~~~~~Ll~~GI~v~~~~fp~--~p~~~~~vRi~isa~----~t~edId~~l~~L~~~~~~  466 (489)
T PLN02483        403 IMLYN-PAKIPAFSRECLKQNVAVVVVGFPA--TPLLLARARICISAS----HSREDLIKALEVISEVGDL  466 (489)
T ss_pred             EEECC-HHHHHHHHHHHHHCCcEEeeeCCCC--CCCCCceEEEEeCCC----CCHHHHHHHHHHHHHHHHH
Confidence            32211 1123456666767899996532332  233457899987654    4589999999999998753

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.92  E-value=1.3e-22  Score=214.00  Aligned_cols=345  Identities=14%  Similarity=0.076  Sum_probs=216.9

Q ss_pred             hcceeEecCCC------CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecC
Q 009673          102 FKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL  175 (529)
Q Consensus       102 ~~~i~L~asen------~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~  175 (529)
                      ++.|+|..++.      .+|+.+.+++...+......+|..   ..|.   .++.+...+++.+.+|.+.+.  -+|.++
T Consensus        32 ~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~---~~G~---~~lr~aia~~~~~~~g~~~~~--~~I~it  103 (409)
T PLN00143         32 RLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAP---TGGI---LPARRAIADYLSNDLPYQLSP--DDVYLT  103 (409)
T ss_pred             CceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCC---CCCC---HHHHHHHHHHHHhhcCCCCCH--hhEEEe
Confidence            36688876654      478889999887765432122321   1122   345555557777766654321  256678


Q ss_pred             ChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCc
Q 009673          176 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPK  253 (529)
Q Consensus       176 sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pk  253 (529)
                      +|+ +++..++.++++|||.|++++|.|.++..        .....|.  +++.+++++ +++.+|+++|+++++. +++
T Consensus       104 ~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~  172 (409)
T PLN00143        104 LGCKHAAEIIIKVLARPEANILLPRPGFPDVET--------YAIFHHL--EIRHFDLLPEKGWEVDLDAVEAIADE-NTI  172 (409)
T ss_pred             cChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHH--------HHHHcCC--EEEEEeccCCCCCcCCHHHHHHhccc-CCE
Confidence            888 99999999999999999999998755421        2234454  566666643 3568999999998876 788


Q ss_pred             EEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---Cc--ccEEEeccccc--ccCCCC
Q 009673          254 LIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY--CDVVTTTTHKS--LRGPRG  321 (529)
Q Consensus       254 lIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~~--aDiv~~S~hK~--l~Gprg  321 (529)
                      ++++++|+||+  ..+   +++|.++|++||+++|+|++ |..+.+.+....++   ..  .-+++.|++|+  ++|+|.
T Consensus       173 ~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~-Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRv  251 (409)
T PLN00143        173 AMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEV-YGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGL  251 (409)
T ss_pred             EEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEcc-ccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccce
Confidence            88888899997  444   77888889999999999998 45555443211222   11  12788999998  489999


Q ss_pred             eEEEee-CC-CcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEE-e
Q 009673          322 GMIFFK-KD-PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL-V  398 (529)
Q Consensus       322 G~i~~~-~~-~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v-~  398 (529)
                      ||++++ ++ .....+..+.+.....+... .+.. ..+++..+|+......+++..+++.++++.+.+.|.+.+... .
T Consensus       252 G~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~-~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~  329 (409)
T PLN00143        252 GWLVTCDPSGLLQICEIADSIKKALNPAPF-PPTF-IQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCP  329 (409)
T ss_pred             EEEEeeCchhhhhhHHHHHHHHHHHhccCC-CCch-HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence            999984 32 00000112222222111111 1222 223333344321112457778888888888989998754322 2


Q ss_pred             cCCCCCceEEEccCCC---CC-cH-HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673          399 SGGSDNHLVLVDLRPM---GI-DG-ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI  473 (529)
Q Consensus       399 ~~gt~~~~~~v~~~~~---~i-~~-~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i  473 (529)
                      .......++|+++...   ++ +. +.+.+++.++||.+.    ||.... .++++||++.      .+++++++..+.|
T Consensus       330 ~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~----pg~~f~-~~~~iRi~~~------~~~~~l~~al~rl  398 (409)
T PLN00143        330 QKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIIL----PGVTVG-LKNWLRITFA------VEQSSLEDGLGRL  398 (409)
T ss_pred             CCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEe----CccccC-CCCeEEEEEc------CCHHHHHHHHHHH
Confidence            2222356788888531   22 33 345677789999994    554321 3578999864      2478888888888


Q ss_pred             HHHHHH
Q 009673          474 HEGVEI  479 (529)
Q Consensus       474 ~~~~~~  479 (529)
                      .++++.
T Consensus       399 ~~~l~~  404 (409)
T PLN00143        399 KSFCGR  404 (409)
T ss_pred             HHHHHH
Confidence            887753

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=99.92  E-value=5.7e-23  Score=212.01  Aligned_cols=314  Identities=17%  Similarity=0.160  Sum_probs=213.3

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      ..|+|..++|.  +|+.+++++...+...  .+|+.      .. ..++    ++.+++++|++++    +|.+++|+ +
T Consensus        20 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~--~~y~~------~~-~~~l----r~~ia~~~~~~~~----~i~~~~G~~~   82 (346)
T TIGR01141        20 EVIKLNSNENPFGPPPKAKEALRAEADKL--HRYPD------PD-PAEL----KQALADYYGVDPE----QILLGNGSDE   82 (346)
T ss_pred             ceEEccCCCCCCCCCHHHHHHHHHhHHHh--hcCCC------CC-HHHH----HHHHHHHhCcChH----HEEEcCCHHH
Confidence            45788777763  6889999998765321  12322      11 1334    3677888898764    45567777 8


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      ++..++.+++++||+|++++|.|+.+.        ......|.  +++.+++++ ++.+|++++++.+.+ ++++|+++.
T Consensus        83 ~l~~~~~~l~~~gd~v~~~~p~y~~~~--------~~~~~~g~--~~~~~~~~~-~~~~d~~~l~~~~~~-~~~~v~l~~  150 (346)
T TIGR01141        83 IIELLIRAFLEPGDAVLVPPPTYSMYE--------ISAKIHGA--EVVKVPLDE-DGQLDLEDILVAIDD-KPKLVFLCS  150 (346)
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCHHHHH--------HHHHHcCC--eEEEeccCC-CCCCCHHHHHHhcCC-CCCEEEEeC
Confidence            888888999999999999998764321        11233454  666777763 478999999998766 899999998


Q ss_pred             CCCCC--CCCHHHHHHHHHHh--CCEEEEecccccccccccccCCCCC--cccEEEecccccc--cCCCCeEEEeeCCCc
Q 009673          260 SAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPV  331 (529)
Q Consensus       260 s~~p~--~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l--~GprgG~i~~~~~~~  331 (529)
                      ++||+  ..+.+++.++|+.+  |+++++|++|. ++...+.....+.  ..+++++|+||++  +|+|.||+++++   
T Consensus       151 p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~---  226 (346)
T TIGR01141       151 PNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYG-EFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANA---  226 (346)
T ss_pred             CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchh-hhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCH---
Confidence            88887  78999999999887  99999999965 3332110000011  1247789999997  578889999987   


Q ss_pred             chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEEEc
Q 009673          332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVD  410 (529)
Q Consensus       332 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~  410 (529)
                         ++.+++.....+.  +.+.. ...+...+++..  ..+++..+++.++++.+.+.|.+. |+.+..+  ...+++++
T Consensus       227 ---~~~~~~~~~~~~~--~~~~~-~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~--~g~~~~~~  296 (346)
T TIGR01141       227 ---EIIDALNKVRAPF--NLSRL-AQAAAIAALRDD--DFIEKTVEEINAERERLYDGLKKLPGLEVYPS--DANFVLIR  296 (346)
T ss_pred             ---HHHHHHHhccCCC--CCCHH-HHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCEECCC--cCCEEEEe
Confidence               6777765543222  22222 233323334321  135777888899999999999885 8886543  34667777


Q ss_pred             cCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673          411 LRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI  473 (529)
Q Consensus       411 ~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i  473 (529)
                      +..   +.+++.+.|.++||.+..    |......++++|+++.       +++|++++++.|
T Consensus       297 ~~~---~~~~~~~~L~~~gI~v~~----g~~f~~~~~~iRls~~-------~~~~i~~~~~~l  345 (346)
T TIGR01141       297 FPR---DADALFEALLEKGIIVRD----LNSYPGLPNCLRITVG-------TREENDRFLAAL  345 (346)
T ss_pred             cCC---CHHHHHHHHHHCCeEEEe----CCCcCCCCCeEEEecC-------CHHHHHHHHHHh
Confidence            753   567788888889999954    3321111678999953       478999888776

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=99.92  E-value=9.3e-23  Score=219.20  Aligned_cols=342  Identities=14%  Similarity=0.115  Sum_probs=213.7

Q ss_pred             cceeEecCCCCC-----cHHHHHHHhhhhhcc-CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC----CCCCCCceee
Q 009673          103 KSLELIASENFT-----SRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNV  172 (529)
Q Consensus       103 ~~i~L~asen~~-----~~~V~eal~~~l~~~-y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g----~~~~~~~~~V  172 (529)
                      ..|+|...||.+     ++.+++.....+... -...++....|+......++.+.+.+++.+.+|    ++++    +|
T Consensus        47 g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe----~I  122 (496)
T PLN02376         47 GIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPE----RV  122 (496)
T ss_pred             ceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChh----hE
Confidence            458999999976     333333322111110 000123322333333345677667788888877    5554    56


Q ss_pred             ecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccc-cccceEEEEEcccCC-CCCCCCHHHHHHHhhh
Q 009673          173 QPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDE-STGLVDYDMLEKTAIL  249 (529)
Q Consensus       173 ~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~-~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~  249 (529)
                      .+++|+ +|+..++.++++|||.|++++|.|+++..        .+. ..|.  ++++++++. +++.+|++++++.+..
T Consensus       123 vit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~--------~~~~~~G~--~vv~v~~~~~~~~~~~~~~le~a~~~  192 (496)
T PLN02376        123 VMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDR--------DLRWRTGV--EIIPVPCSSSDNFKLTVDAADWAYKK  192 (496)
T ss_pred             EEccchHHHHHHHHHHhCCCCCEEEECCCCccchHH--------HHHhhCCC--EEEEEeCCCCccCcCCHHHHHHHHHH
Confidence            678888 99999999999999999999998876531        122 2454  677777754 3478999999765421


Q ss_pred             -----cCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC---C-C-----c--cc--
Q 009673          250 -----FRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---F-K-----Y--CD--  306 (529)
Q Consensus       250 -----~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~-~-----~--aD--  306 (529)
                           .++|+|++++|+||+  ..+   +++|.++|+++|++||+|++| ..+++.+....+   + .     .  .+  
T Consensus       193 a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY-~~~~f~~~~~~si~~l~~~~~~~~~~~~~v  271 (496)
T PLN02376        193 AQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIY-AATVFAGGDFVSVAEVVNDVDISEVNVDLI  271 (496)
T ss_pred             HHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCc-cccccCCCCcccHHHhhccccccccCCCeE
Confidence                 368989999999997  444   667888899999999999995 444433211111   1 0     0  12  


Q ss_pred             EEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchH-H----HHHHHH
Q 009673          307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-K----VYQNKV  379 (529)
Q Consensus       307 iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~----~~~~~i  379 (529)
                      +++.|+||.|  +|.|.||++.+++     .+.+.+......+  ..+...+ .+++..|.   ...| +    +.++++
T Consensus       272 ~vv~S~SK~~glpGlRvG~li~~~~-----~l~~~~~~~~~~~--~vs~~~Q-~a~~~~L~---d~~~~~~~l~~~r~~l  340 (496)
T PLN02376        272 HIVYSLSKDMGLPGFRVGIVYSFND-----SVVSCARKMSSFG--LVSSQTQ-LMLASMLS---DDQFVDNFLMESSRRL  340 (496)
T ss_pred             EEEEeccccCCCCcceEEEEEECCH-----HHHHHHHHHhhcC--CCCHHHH-HHHHHHhC---ChhHHHHHHHHHHHHH
Confidence            4578999986  7999999999653     4555443322111  1222222 22222332   2233 3    336667


Q ss_pred             HHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCC-----C-cHHHH-HHhHhcCCeEEcCCCCCCCC-CCCCCCeEEE
Q 009673          380 VSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMG-----I-DGARV-EKILDMASITLNKNSVPGDK-SALVPGGIRI  451 (529)
Q Consensus       380 ~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~-----i-~~~~~-~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRi  451 (529)
                      .++++.+.+.|.+.|+.+..+ ....++|++++...     . +..++ ..+++++||.+.    ||.. ....++++||
T Consensus       341 ~~r~~~l~~~L~~~gi~~~~~-~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~----pGs~F~~~~~g~~Ri  415 (496)
T PLN02376        341 GIRHKVFTTGIKKADIACLTS-NAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVS----PGSSFRCTEPGWFRI  415 (496)
T ss_pred             HHHHHHHHHHHHHCCCcccCC-CceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEe----CccccCCCCCCEEEE
Confidence            778888889998888876654 23467888885321     1 11233 345567899995    4443 2224689999


Q ss_pred             ccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          452 GSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       452 g~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      ++..     +.++++++..+.|.+++...
T Consensus       416 ~fa~-----~~~~~l~~al~rl~~~l~~~  439 (496)
T PLN02376        416 CFAN-----MDDDTLHVALGRIQDFVSKN  439 (496)
T ss_pred             EeeC-----CCHHHHHHHHHHHHHHHHHh
Confidence            9743     45788888888888888643

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=99.92  E-value=1.5e-22  Score=212.56  Aligned_cols=333  Identities=17%  Similarity=0.133  Sum_probs=212.9

Q ss_pred             hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC--CCCceeeecCCh
Q 009673          102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE--NKWGVNVQPLSG  177 (529)
Q Consensus       102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~--~~~~~~V~~~sG  177 (529)
                      +..++|..+++.  +|+.+.+++.+.+...  ..|+.   ..|   ..++.+...+++.+.+|.+.  + ..-+|.+++|
T Consensus        28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~--~~Y~~---~~G---~~~lr~aia~~~~~~~~~~~~~~-~~~~i~it~G   98 (393)
T TIGR03538        28 KPPIALSIGEPKHPTPAFVLEALRENLHGL--STYPT---TKG---LPELRQAIARWLERRFDLPTGVD-PERHVLPVNG   98 (393)
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHhhcc--CCCCC---CCC---CHHHHHHHHHHHHHhhCCcccCC-CCceEEECCC
Confidence            467888877764  6788999998765321  12322   112   23555556677877777541  1 1015677898


Q ss_pred             H-HHHHHHHHhhcCCCCE--EEEcCCCCCccccccccccccccccccceEEEEEcccCCCC-CCCCHHHHHHHhhhcCCc
Q 009673          178 S-PANFEVYTAILKPHDR--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPK  253 (529)
Q Consensus       178 s-~A~~~~l~all~pGD~--Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~-~~iD~d~le~~i~~~~pk  253 (529)
                      + +++..++.++++|||.  |++++|.|.++.        ......|.  +++.+++++++ +.+|++++++.+.+ ++|
T Consensus        99 a~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k  167 (393)
T TIGR03538        99 TREALFAFAQAVINPGQAPLVVMPNPFYQIYE--------GAALLAGA--EPYFLNCTAENGFLPDFDAVPESVWR-RCQ  167 (393)
T ss_pred             cHHHHHHHHHHHcCCCCcceEEecCCCCcchH--------HHHHhcCC--eEEEeeccccCCCCCCHHHHHHHHhh-cce
Confidence            8 9999999999999996  888888765432        12334554  67777776443 68999999998877 899


Q ss_pred             EEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccc--cCCCC---C--c-----ccEEEeccccc-
Q 009673          254 LIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV--VADPF---K--Y-----CDVVTTTTHKS-  315 (529)
Q Consensus       254 lIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~--~~~~~---~--~-----aDiv~~S~hK~-  315 (529)
                      +|++++|+||+  ..+   +++|.++|++||++||+|+++ ..+.+.+.  .+..+   .  +     --+++.|++|. 
T Consensus       168 ~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~  246 (393)
T TIGR03538       168 LLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECY-SELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRS  246 (393)
T ss_pred             EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcch-hhcccCCCCCCcCHHHhcccccccccccEEEEecchhhc
Confidence            99999999997  444   788889999999999999984 34433221  11111   0  1     12788999995 


Q ss_pred             -ccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC
Q 009673          316 -LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG  394 (529)
Q Consensus       316 -l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G  394 (529)
                       ++|+|.||+++++      ++.+++.........+.+...+.+++ .++..  ....++..+++.++++.+.+.|++. 
T Consensus       247 ~~~GlRvG~~i~~~------~l~~~~~~~~~~~~~~~~~~~q~~~~-~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~-  316 (393)
T TIGR03538       247 NLPGLRSGFVAGDA------EILKAFLRYRTYHGCAMPIPTQLASI-AAWND--EQHVRENRALYREKFAAVLEILGQV-  316 (393)
T ss_pred             CCcccceEEEecCH------HHHHHHHHHHHhhccCcCHHHHHHHH-HHhcC--hHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence             4899999999987      67666654322111222233333322 23321  2234667777888888898988774 


Q ss_pred             cEEecCCCCCceEEEccCCCCCcHHHHHHh-HhcCCeEEcCCCCCCCC---CCCCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673          395 YKLVSGGSDNHLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVAIA  470 (529)
Q Consensus       395 ~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~---~~~~~~~iRig~~~~tt~g~~~~d~~~la  470 (529)
                      +.+..+ ..+.++|++++   .+..++.+. ++++||.+.++...+..   .....+++||++..      +++++++..
T Consensus       317 ~~~~~p-~gg~f~~~~~~---~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~------~~~~l~~~l  386 (393)
T TIGR03538       317 LDLELP-DAGFYLWPKVP---GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA------PLEECVEAA  386 (393)
T ss_pred             CcccCC-CeeEEEEEECC---CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC------CHHHHHHHH
Confidence            333322 23567788875   245555544 57899999544321110   11235689999642      368888888


Q ss_pred             HHHHH
Q 009673          471 DFIHE  475 (529)
Q Consensus       471 ~~i~~  475 (529)
                      +.|.+
T Consensus       387 ~~l~~  391 (393)
T TIGR03538       387 ERIRS  391 (393)
T ss_pred             HHHHH
Confidence            77765

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=99.92  E-value=1.7e-22  Score=210.45  Aligned_cols=322  Identities=18%  Similarity=0.168  Sum_probs=219.7

Q ss_pred             ceeEecCCCC--CcHHHHHHHhhhhhcc--CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673          104 SLELIASENF--TSRAVMEAVGSCLTNK--YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-  178 (529)
Q Consensus       104 ~i~L~asen~--~~~~V~eal~~~l~~~--y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-  178 (529)
                      .++|..++|+  +|+.+++++...+...  ...+||.       .....+++.+.+++.+.+|.+.+.  .+|.+++|+ 
T Consensus        28 ~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~-------~g~~~lr~aia~~~~~~~~~~~~~--~~I~it~G~~   98 (368)
T PRK03317         28 PVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPD-------RDAVALRADLAAYLTAQTGVGLTV--ENVWAANGSN   98 (368)
T ss_pred             eeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCC-------CchHHHHHHHHHHhhhhccCCCCh--hhEEECCCHH
Confidence            4788888874  6889999998776421  1123432       113456656667777776654321  367789998 


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      +++..++.++++|||.|++++|.|.++..        .....|.  ++++++.+ +++.+|++++++++...++|+|+++
T Consensus        99 ~~l~~~~~~~~~~gd~v~v~~P~y~~~~~--------~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~i~l~  167 (368)
T PRK03317         99 EILQQLLQAFGGPGRTALGFVPSYSMHPI--------IARGTHT--EWVEGPRA-ADFTLDVDAAVAAIAEHRPDVVFLT  167 (368)
T ss_pred             HHHHHHHHHhcCCCCEEEEeCCChHHHHH--------HHHhcCC--eeEEcccC-CCCCCCHHHHHHHHhccCCCEEEEe
Confidence            89999999999999999999998754421        2223343  66666654 4578999999999876588999988


Q ss_pred             CCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC----ccc-EEEecccccc--cCCCCeEEEeeCC
Q 009673          259 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RGPRGGMIFFKKD  329 (529)
Q Consensus       259 ~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~----~aD-iv~~S~hK~l--~GprgG~i~~~~~  329 (529)
                      .|+||+  ..+.+++.++++.++++||+|++|. ++...+. +....    ..+ +++.|++|.+  +|.|.||+++++ 
T Consensus       168 ~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~-~~~~~~~-~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~-  244 (368)
T PRK03317        168 SPNNPTGTALPLDDVEAILDAAPGIVVVDEAYA-EFRRSGT-PSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAP-  244 (368)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHCCceEEEeCCch-hhcccCC-cCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCH-
Confidence            999987  7899999999999999999999964 3332221 11111    123 6778999987  588999999987 


Q ss_pred             CcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEE
Q 009673          330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV  409 (529)
Q Consensus       330 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v  409 (529)
                           ++.+.+.....+.  +.+.. ..++...+++..  ..+.+..+++.++++.+.+.|++.|+.+..+. .+++.|.
T Consensus       245 -----~~~~~l~~~~~~~--~~s~~-~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~  313 (368)
T PRK03317        245 -----AVVDALRLVRLPY--HLSAV-TQAAARAALRHA--DELLASVAALRAERDRVVAWLRELGLRVAPSD-ANFVLFG  313 (368)
T ss_pred             -----HHHHHHHhcCCCC--CCCHH-HHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHHHHHCCCEeCCCC-CcEEEEe
Confidence                 6777776543222  22222 222333345432  24455667778888889999988888766532 2333333


Q ss_pred             ccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          410 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       410 ~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ++.    +..++.+.|.++||.+...    .    .++++||++.       ++++++++.+.+++++.
T Consensus       314 ~~~----~~~~~~~~l~~~Gv~v~~~----~----~~~~iRi~~~-------~~~~~~~~~~~l~~~~~  363 (368)
T PRK03317        314 RFA----DRHAVWQGLLDRGVLIRDV----G----IPGWLRVTIG-------TPEENDAFLAALAEVLA  363 (368)
T ss_pred             ccC----CHHHHHHHHHHCCEEEEeC----C----CCCeEEEecC-------CHHHHHHHHHHHHHHHH
Confidence            442    4567888888899999532    1    2478999963       36899999999988764

>PRK06107 aspartate aminotransferase; Provisional

Probab=99.91  E-value=2.8e-22  Score=211.23  Aligned_cols=335  Identities=14%  Similarity=0.056  Sum_probs=219.0

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.++|..+.+.  +++.+.+++...+.... .+|+.      .....++++.+.+++++.+|.+.+.  .+|.+++|+ +
T Consensus        34 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~lr~~ia~~l~~~~g~~~~~--~~i~~t~G~~~  104 (402)
T PRK06107         34 SIVDLTVGEPDFDTPDHIKQAAVAAIERGE-TKYTL------VNGTPALRKAIIAKLERRNGLHYAD--NEITVGGGAKQ  104 (402)
T ss_pred             CEEEcCCCCCCCCCCHHHHHHHHHHHHcCC-CCCCC------CCCCHHHHHHHHHHHHHhcCCCCCh--hhEEEeCCHHH
Confidence            45788776653  46888898887775321 12322      1223355556668888888886432  367778987 9


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      |+..++.++++|||+|++++|.|.++..        .+...+.  .++.++++. +++.+|++++++.+.+ ++++|+++
T Consensus       105 al~~~~~~~~~~gd~vl~~~p~y~~y~~--------~~~~~~~--~~~~v~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~  173 (402)
T PRK06107        105 AIFLALMATLEAGDEVIIPAPYWVSYPD--------MVLANDG--TPVIVACPEEQGFKLTPEALEAAITP-RTRWLILN  173 (402)
T ss_pred             HHHHHHHHhcCCCCEEEEecCCCcCHHH--------HHHHcCC--EEEEecCCcccCCCCCHHHHHhhcCc-CceEEEEE
Confidence            9999999999999999999987654421        2223333  455666643 3467999999999876 88999888


Q ss_pred             CCCCCC--CC---CHHHHHHHHHHh-CCEEEEecccccccccccc-cCCCC---Cc---ccEEEecccccc--cCCCCeE
Q 009673          259 ASAYPR--DF---DYPRMRQIADAV-GALLMMDMAHISGLVAASV-VADPF---KY---CDVVTTTTHKSL--RGPRGGM  323 (529)
Q Consensus       259 ~s~~p~--~~---d~~~i~~ia~~~-g~~livD~ah~~Gli~~~~-~~~~~---~~---aDiv~~S~hK~l--~GprgG~  323 (529)
                      +|+||+  ..   ++++|+++|+++ |+++|+|+++. .+.+.+. .+...   ++   --++++|+||.+  +|.|.||
T Consensus       174 ~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~-~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~  252 (402)
T PRK06107        174 APSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYD-HIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGY  252 (402)
T ss_pred             CCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhcc-ccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceee
Confidence            888887  34   467788889998 99999999853 4433221 11111   11   237789999986  7889999


Q ss_pred             EEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCC
Q 009673          324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGS  402 (529)
Q Consensus       324 i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt  402 (529)
                      +++++      ++.+.+......... +++....+++..+|.. .....++..+.+.++++.+.+.|++. |+.+..+ .
T Consensus       253 ~~~~~------~~~~~~~~~~~~~~~-~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p-~  323 (402)
T PRK06107        253 AAGPA------DLIAAINKLQSQSSS-CPSSISQAAAAAALNG-DQSFVTESVAVYKQRRDYALALLNAIPGLSCLVP-D  323 (402)
T ss_pred             eecCH------HHHHHHHHHHHhccc-CCChHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC-C
Confidence            99987      677666543321112 2233333333334431 12233667778888899999999874 7766543 2


Q ss_pred             CCceEEEccCC-------CCC---cHHH-HHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673          403 DNHLVLVDLRP-------MGI---DGAR-VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD  471 (529)
Q Consensus       403 ~~~~~~v~~~~-------~~i---~~~~-~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~  471 (529)
                      .+.++|++++.       .+.   +..+ +..+++++||.+.    ||.... .++++||++.      .+++++++..+
T Consensus       324 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~----pg~~Fg-~~~~iRis~~------~~~e~l~~~l~  392 (402)
T PRK06107        324 GAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVV----QGTAYG-LSPYFRLSIA------TSLETLEEACA  392 (402)
T ss_pred             cceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEe----CccccC-CCCeEEEEeC------CCHHHHHHHHH
Confidence            35666777631       121   3444 5567788999994    554321 2578999974      24789888888


Q ss_pred             HHHHHHH
Q 009673          472 FIHEGVE  478 (529)
Q Consensus       472 ~i~~~~~  478 (529)
                      .|.+++.
T Consensus       393 ~l~~~l~  399 (402)
T PRK06107        393 RIERAVA  399 (402)
T ss_pred             HHHHHHH
Confidence            8887764

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=99.91  E-value=1.4e-22  Score=209.72  Aligned_cols=317  Identities=20%  Similarity=0.190  Sum_probs=215.1

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.|+|..++|+  +++.+++++...+.+.. ..||.      .. ..++    ++.++++++++++    +|.+++|+ +
T Consensus        25 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~-~~y~~------~~-~~~l----r~aia~~~~~~~~----~I~it~G~~~   88 (353)
T PRK05387         25 KLIKLNTNENPYPPSPKVLEAIRAALGDDL-RLYPD------PN-ADAL----RQAIAAYYGLDPE----QVFVGNGSDE   88 (353)
T ss_pred             ceeeccCCCCCCCCCHHHHHHHHHHhhhhh-hcCCC------Cc-HHHH----HHHHHHHhCCCHH----HEEEcCCHHH
Confidence            56888888875  47889999987654322 12332      11 1233    4677788888875    56678988 9


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      ++..++.++++|||+|++++|.|..+.        ......|.  +++.++++ +++.+|++++++     +.++|++++
T Consensus        89 al~~~~~~l~~~gd~vlv~~P~y~~~~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~-----~~~~v~~~~  152 (353)
T PRK05387         89 VLAHAFLAFFNHDRPLLFPDITYSFYP--------VYAGLYGI--PYEEIPLD-DDFSIDVEDYLR-----PNGGIIFPN  152 (353)
T ss_pred             HHHHHHHHhcCCCCEEEEeCCCHHHHH--------HHHHHcCC--EEEEeecC-CCCCCCHHHHHh-----cCCEEEEeC
Confidence            999999999999999999998764321        12234454  66666665 457899999863     357888888


Q ss_pred             CCCCC--CCCHHHHHHHHHHh-CCEEEEecccccccccccccCCCC-C--cccEEEecccccc--cCCCCeEEEeeCCCc
Q 009673          260 SAYPR--DFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPF-K--YCDVVTTTTHKSL--RGPRGGMIFFKKDPV  331 (529)
Q Consensus       260 s~~p~--~~d~~~i~~ia~~~-g~~livD~ah~~Gli~~~~~~~~~-~--~aDiv~~S~hK~l--~GprgG~i~~~~~~~  331 (529)
                      |+||+  ..+.+++.+|++.+ |+++|+|++|. .+.  +....++ .  ...++++|++|++  +|+|.||+++++   
T Consensus       153 P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~-~~~--~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~---  226 (353)
T PRK05387        153 PNAPTGIALPLAEIERILAANPDSVVVIDEAYV-DFG--GESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP---  226 (353)
T ss_pred             CCCCCCCCCCHHHHHHHHHhCCCcEEEEeCccc-ccC--CcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCH---
Confidence            99997  77899999999876 99999999863 221  1111111 1  2348899999975  789999999876   


Q ss_pred             chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEcc
Q 009673          332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL  411 (529)
Q Consensus       332 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~  411 (529)
                         ++.+.+..........+.+.....++..++..  ...+++..+++.++++.+.+.|++.|+.+..+  ..+++|+.+
T Consensus       227 ---~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~~~~~~  299 (353)
T PRK05387        227 ---ELIEALNRVKNSFNSYPLDRLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEALGFEVLPS--KANFVFARH  299 (353)
T ss_pred             ---HHHHHHHHhhccCCCCCcCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeECCC--cCcEEEEEC
Confidence               67776654322111112223333333334431  12346778888899999999999888876543  245666665


Q ss_pred             CCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          412 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       412 ~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .  +.+..++.+.|.++||.+...   +.  +..++++||++.       ++++++++.+.|++++.
T Consensus       300 ~--~~~~~~~~~~l~~~gi~v~~~---~~--~~~~~~iRis~~-------~~~~~~~~~~~L~~~~~  352 (353)
T PRK05387        300 P--SHDAAELAAKLRERGIIVRHF---NK--PRIDQFLRITIG-------TDEEMEALVDALKEILA  352 (353)
T ss_pred             C--CCCHHHHHHHHHHCCEEEEEC---CC--CCCCCeEEEEeC-------CHHHHHHHHHHHHHHhh
Confidence            4  356677888888999999532   11  123578999863       36899999999988764

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=99.91  E-value=2.7e-22  Score=208.96  Aligned_cols=320  Identities=17%  Similarity=0.109  Sum_probs=215.5

Q ss_pred             ceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HH
Q 009673          104 SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA  180 (529)
Q Consensus       104 ~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A  180 (529)
                      .++|..+++.  +++.+++++...+...+  +|+.      .. ..+++    +.++++++++++    +|.+++|+ ++
T Consensus        34 ~~~l~~~~~~~~~~~~~~~a~~~~~~~~~--~Y~~------~~-~~~Lr----~~ia~~~~~~~~----~I~it~G~~~~   96 (369)
T PRK08153         34 RARIGANESGFGPSPSVIAAMREAAAEIW--KYGD------PE-NHDLR----HALAAHHGVAPE----NIMVGEGIDGL   96 (369)
T ss_pred             eeEecCCCCCCCCCHHHHHHHHHHHHHhh--cCCC------Cc-cHHHH----HHHHHHhCCCHH----HEEEcCCHHHH
Confidence            3688888874  58899999886653211  2332      11 23444    566777888774    56779998 77


Q ss_pred             HHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 009673          181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS  260 (529)
Q Consensus       181 ~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s  260 (529)
                      +..++.++++|||.|++.+|.|.+...        .+...|.  +++.++++.  ..+|++++++.+...++++|+++.|
T Consensus        97 l~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~--~~~~vp~~~--~~~~~~~l~~~~~~~~~~~i~l~~P  164 (369)
T PRK08153         97 LGLIVRLYVEPGDPVVTSLGAYPTFNY--------HVAGFGG--RLVTVPYRD--DREDLDALLDAARRENAPLVYLANP  164 (369)
T ss_pred             HHHHHHHhcCCCCEEEECCCcchHHHH--------HHHHcCC--eEEEeeCCC--CCCCHHHHHHHhcccCCcEEEEeCC
Confidence            778888889999999999987754421        1233454  556666642  3689999987776558999999889


Q ss_pred             CCCC--CCCHHHHHHHHHHh--CCEEEEecccccccccccccCCCCC--c-ccEEEecccccc--cCCCCeEEEeeCCCc
Q 009673          261 AYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPV  331 (529)
Q Consensus       261 ~~p~--~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~~--~-aDiv~~S~hK~l--~GprgG~i~~~~~~~  331 (529)
                      +||+  ..+.+++.++++..  |++||+|+++ ..+...+.. .++.  . -.+++.|++|++  +|+|.||+++++   
T Consensus       165 ~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y-~~~~~~~~~-~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~---  239 (369)
T PRK08153        165 DNPMGSWHPAADIVAFIEALPETTLLVLDEAY-CETAPAGAA-PPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAP---  239 (369)
T ss_pred             CCCCCCCCCHHHHHHHHHhCCCCcEEEEeCch-hhhcCcccc-hhhhhcCCCEEEEecchHhccCcchheeeeecCH---
Confidence            9987  67777777776644  8999999985 344433211 1221  1 237889999987  689999999987   


Q ss_pred             chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEcc
Q 009673          332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL  411 (529)
Q Consensus       332 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~  411 (529)
                         ++.+.+.....+  .+. +....+++..+++.  ....++..+.+.++++.+.+.|++.|+.+.+.  ..+++++++
T Consensus       240 ---~~~~~l~~~~~~--~~~-s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~p~--~~~f~~~~~  309 (369)
T PRK08153        240 ---GTIKAFDKVRNH--FGM-NRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARANGLTPLPS--ATNFVAIDC  309 (369)
T ss_pred             ---HHHHHHHHhhcC--CCC-CHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCCC--cCcEEEEEC
Confidence               676666543322  222 33333333344531  12236677778888888999998888865532  356677777


Q ss_pred             CCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          412 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       412 ~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      .........+.+.|.++||.+..   |+..  ..++++||++.       +++|++++++.|++++..
T Consensus       310 ~~~~~~a~~l~~~l~~~Gi~v~~---p~~~--~~~~~iRis~~-------~~~~~~~~~~al~~~~~~  365 (369)
T PRK08153        310 GRDGAFARAVLDGLIARDIFVRM---PGVA--PLDRCIRVSCG-------PDEELDLFAEALPEALEA  365 (369)
T ss_pred             CCCcccHHHHHHHHHHCCeEEee---CCCC--CCCCeEEEecC-------CHHHHHHHHHHHHHHHHH
Confidence            43333456777778889999842   3321  13568999964       379999999999988764

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=99.91  E-value=2.7e-22  Score=206.05  Aligned_cols=316  Identities=22%  Similarity=0.239  Sum_probs=225.1

Q ss_pred             cceeEecCCCCC--cHHHHHHHhhhhh--ccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC-CCCCCCceeeecCCh
Q 009673          103 KSLELIASENFT--SRAVMEAVGSCLT--NKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSG  177 (529)
Q Consensus       103 ~~i~L~asen~~--~~~V~eal~~~l~--~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g-~~~~~~~~~V~~~sG  177 (529)
                      ..+.|.++||+.  |+.+++++...+.  ++|    |..       ...+++    +.+++.+| .+.+    +|.++.|
T Consensus        23 ~~i~LssNenP~gp~~~~~~~~~~~~~~~~rY----Pd~-------~~~~l~----~a~a~~~~~~~~~----~V~~gnG   83 (356)
T COG0079          23 GIIKLSSNENPYGPPPKVIEAIRAALDKLNRY----PDP-------DYRELR----AALAEYYGVVDPE----NVLVGNG   83 (356)
T ss_pred             cceeecCCCCCCCCCHHHHHHHHHHHHhhccC----CCC-------cHHHHH----HHHHHHhCCCCcc----eEEEcCC
Confidence            358899999974  5888888876653  333    331       122333    66788889 6654    6777999


Q ss_pred             H-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673          178 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII  256 (529)
Q Consensus       178 s-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi  256 (529)
                      + +.+..++.+++.|||+|+++.|+|+.+-        ......|+  +++.+++++  +.+|++.+.+.+.+ ++++|+
T Consensus        84 sde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~--------~~a~~~g~--~~~~v~~~~--~~~d~~~~~~~~~~-~~~lv~  150 (356)
T COG0079          84 SDELIELLVRAFVEPGDTVLIPEPTFSMYE--------IAAQLAGA--EVVKVPLKE--FRLDLDAILAAIRD-KTKLVF  150 (356)
T ss_pred             hHHHHHHHHHHhhcCCCEEEEcCCChHHHH--------HHHHhcCC--eEEEecccc--cccCHHHHHHhhhc-CCCEEE
Confidence            9 8888999999999999999999875442        12334554  667776663  89999999999988 899999


Q ss_pred             EcCCCCCC--CCCHHHHHHHHHHh--CCEEEEecccccccccccccCCCCCccc--EEEecccccc--cCCCCeEEEeeC
Q 009673          257 AGASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFKYCD--VVTTTTHKSL--RGPRGGMIFFKK  328 (529)
Q Consensus       257 ~~~s~~p~--~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~~~aD--iv~~S~hK~l--~GprgG~i~~~~  328 (529)
                      +++||||+  ..+.++|.+++...  +.+|++|+| |.......... .+.+.+  +++-|++|.+  +|.|.||+++++
T Consensus       151 i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEA-Y~eF~~~~~~~-l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~  228 (356)
T COG0079         151 LCNPNNPTGTLLPREELRALLEALPEGGLVVIDEA-YIEFSPESSLE-LLKYPPNLIVLRTFSKAFGLAGLRVGYAIANP  228 (356)
T ss_pred             EeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCc-hhhcCCchhhh-hccCCCCEEEEEecHHhhhcchhceeeccCCH
Confidence            99999998  66777777777654  889999999 44433311110 011223  7889999974  899999999988


Q ss_pred             CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcE-EecCCCCCceE
Q 009673          329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK-LVSGGSDNHLV  407 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~-v~~~gt~~~~~  407 (529)
                            ++.+.+++...|+...+   ...++..++++..  +..++..+++...++++.+.|++.|+. +..  +..+++
T Consensus       229 ------~~i~~l~~vr~p~~v~~---~a~~aa~aal~~~--~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~p--S~aNFv  295 (356)
T COG0079         229 ------ELIAALNKVRPPFNVSS---PALAAAIAALRDA--DYLEESVERIREERERLYAALKALGLFGVFP--SQANFV  295 (356)
T ss_pred             ------HHHHHHHHhcCCCCCCH---HHHHHHHHHcccH--HHHHHHHHHHHHHHHHHHHHHHhCCCCeecC--CCCcEE
Confidence                  89999988776653322   2222222334321  334788888999999999999998754 444  236778


Q ss_pred             EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ++++.. +. ...+.+.|.++||.++...-+    +..++++||++.       +++|.+++.++|.++++
T Consensus       296 lv~~~~-~~-~~~l~~~L~~~giivR~~~~~----~~~~~~lRitvg-------t~een~~ll~AL~~~~~  353 (356)
T COG0079         296 LVRVPD-AE-AAALAEALLKKGILVRDCSSV----GLLPGYLRITVG-------TPEENDRLLAALREVLK  353 (356)
T ss_pred             EEECCC-cc-HHHHHHHHHHCCEEEEeCCCC----CCCCCeEEEEeC-------CHHHHHHHHHHHHHHHh
Confidence            887754 22 457888898999999864211    234679999863       36888999999988775

>PRK08175 aminotransferase; Validated

Probab=99.91  E-value=9.1e-22  Score=206.85  Aligned_cols=338  Identities=15%  Similarity=0.105  Sum_probs=213.3

Q ss_pred             cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      ..++|..++.  .+++.+.+++...+.+....+|+.      .....++++...+++.+.+|...+. ..+|.+++|+ +
T Consensus        30 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~g~~~~~-~~~i~~t~G~~~  102 (395)
T PRK08175         30 DIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYST------SRGIPRLRRAISRWYQDRYDVDIDP-ESEAIVTIGSKE  102 (395)
T ss_pred             CeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCC-CCcEEEccCcHH
Confidence            4566655442  246667777766553322222322      1223456666667777777764321 0146678988 8


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEE
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIA  257 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~  257 (529)
                      ++..++.++++|||+|++++|.|..+..        .....|.  +++.++++++  ..+.++++++++..  ++++|++
T Consensus       103 ~l~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~--~~~~~~l~~~l~~~~~~~~~v~i  170 (395)
T PRK08175        103 GLAHLMLATLDHGDTVLVPNPSYPIHIY--------GAVIAGA--QVRSVPLVEG--VDFFNELERAIRESYPKPKMMIL  170 (395)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCC--eEEEEecccC--CCcHHHHHHHHhhccCCceEEEE
Confidence            8888888999999999999998765421        1233454  6667766643  23578888887642  6899999


Q ss_pred             cCCCCCC--CCCH---HHHHHHHHHhCCEEEEecccccccccccccCCC---CC-ccc--EEEecccccc--cCCCCeEE
Q 009673          258 GASAYPR--DFDY---PRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK-YCD--VVTTTTHKSL--RGPRGGMI  324 (529)
Q Consensus       258 ~~s~~p~--~~d~---~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~~-~aD--iv~~S~hK~l--~GprgG~i  324 (529)
                      +.|+||+  ..+.   ++|.++|+++|+++|+|+++. .+.+.+....+   +. ..|  +++.|++|++  +|.|.||+
T Consensus       171 ~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~-~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~  249 (395)
T PRK08175        171 GFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYA-DIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFM  249 (395)
T ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchH-hhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheee
Confidence            8888887  4554   788899999999999999853 44433221111   11 123  6779999997  78899999


Q ss_pred             EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCC
Q 009673          325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN  404 (529)
Q Consensus       325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~  404 (529)
                      +.++      ++.+++.+.......+.+...+.++ ..++... ....+..++.+.++++.+.+.|++.|+.+..+ ..+
T Consensus       250 ~~~~------~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p-~~g  320 (395)
T PRK08175        250 VGNP------ELVSALARIKSYHDYGTFTPLQVAA-IAALEGD-QQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMP-KAS  320 (395)
T ss_pred             eCCH------HHHHHHHHHHhhcccCCCcHHHHHH-HHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC-CEE
Confidence            9887      6777665432111122223333332 2344321 12346667778888999999999888876543 235


Q ss_pred             ceEEEccCCC--CCcHHHHH-HhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          405 HLVLVDLRPM--GIDGARVE-KILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       405 ~~~~v~~~~~--~i~~~~~~-~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .++|+++...  ..+..++. ++++++||.|..+...   +...++++||++.      ..++.+++..+.|.+++.
T Consensus       321 ~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f---~~~~~~~lRis~~------~~~~~~~~al~~l~~~l~  388 (395)
T PRK08175        321 MYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGF---GDYGDTHVRFALI------ENRDRIRQAIRGIKAMFR  388 (395)
T ss_pred             EEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhh---CcCCCCeEEEEeC------CCHHHHHHHHHHHHHHHH
Confidence            6778887532  12345555 4567899999543222   1223568999863      246888888888777764

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=99.91  E-value=1e-22  Score=209.22  Aligned_cols=318  Identities=18%  Similarity=0.147  Sum_probs=200.7

Q ss_pred             cCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHH
Q 009673          109 ASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT  186 (529)
Q Consensus       109 asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~  186 (529)
                      .+||+  +++.+++++...+.. +    .  + |+..+...+++    +++++++| +.    ..+.+.+|++|+..++.
T Consensus         3 ~~~~~~~~~~~v~~a~~~~~~~-~----~--~-~~~~~~~~~l~----~~~a~~~g-~~----~~~~~~~gt~a~~~~~~   65 (338)
T cd06502           3 RSDTVTGPTPEMLEAMAAANVG-D----D--V-YGEDPTTAKLE----ARAAELFG-KE----AALFVPSGTAANQLALA   65 (338)
T ss_pred             ccccCCCCCHHHHHHHHhcccC-C----c--c-cCCCHHHHHHH----HHHHHHhC-CC----eEEEecCchHHHHHHHH
Confidence            36665  588999999765421 1    1  1 22233344444    78889999 33    24666888899999999


Q ss_pred             hhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh------cCCcEEEEcCC
Q 009673          187 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL------FRPKLIIAGAS  260 (529)
Q Consensus       187 all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~------~~pklIi~~~s  260 (529)
                      ++++|||+|++.++.|.++.....     .....|.  +++.++.+  ++.+|+++|++++++      .++++|+++++
T Consensus        66 ~l~~~gd~v~~~~~~~~~~~~~~~-----~~~~~g~--~~~~v~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p  136 (338)
T cd06502          66 AHTQPGGSVICHETAHIYTDEAGA-----PEFLSGV--KLLPVPGE--NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENT  136 (338)
T ss_pred             HhcCCCCeEEEecCcceeeecCCc-----HHHHcCc--eEEeecCC--CCcCCHHHHHHHhhccCCCcCCcceEEEEEee
Confidence            999999999999887754421110     1123454  56666654  368999999999874      26889998877


Q ss_pred             CCCC----CCCHHHHHHHHHHhCCEEEEecccccccc-cccccCCCC-CcccEEEecccccccCCCCeEEEeeCCCcchh
Q 009673          261 AYPR----DFDYPRMRQIADAVGALLMMDMAHISGLV-AASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGV  334 (529)
Q Consensus       261 ~~p~----~~d~~~i~~ia~~~g~~livD~ah~~Gli-~~~~~~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~  334 (529)
                      +|++    ..++++|.++|+++|+++++|+||..+.. ..+...... .++|+++.|+||+++.|.|++++.++      
T Consensus       137 ~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~------  210 (338)
T cd06502         137 TEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNR------  210 (338)
T ss_pred             cCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCH------
Confidence            7765    24678899999999999999999764432 112110111 25789999999999767666566666      


Q ss_pred             HHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCC
Q 009673          335 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM  414 (529)
Q Consensus       335 ~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~  414 (529)
                      ++.+.+.....+ ..++...+.+.+.+ ++..+....+.++.+++.++++++.+.|++.|+.+..  ...+++++.+...
T Consensus       211 ~~~~~~~~~~~~-~~~~~~~~~~~~~a-~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~~v~~~~~  286 (338)
T cd06502         211 DFIARARRRRKQ-AGGGMRQSGFLAAA-GLAALENDLWLRRLRHDHEMARRLAEALEELGGLESE--VQTNIVLLDPVEA  286 (338)
T ss_pred             HHHHHHHHHHHH-hCCChhhHHHHHHH-HHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCCCccc--ccCCeEEEecCCc
Confidence            666666543211 11222222222211 2222223346677788899999999999988875433  2345555554321


Q ss_pred             CCcHHHHHHhHh---cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          415 GIDGARVEKILD---MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       415 ~i~~~~~~~~L~---~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      ......+.+.|.   +.||.+...         ..+.|||+.+..+    +++|++++++.+++
T Consensus       287 ~~~~~~l~~~l~~~~~~gi~~~~~---------~~~~lRi~~~~~~----~~~~i~~~~~~l~~  337 (338)
T cd06502         287 NAVFVELSKEAIERRGEGVLFYAW---------GEGGVRFVTHWDT----TEEDVDELLSALKA  337 (338)
T ss_pred             cHHHHHHHHHHHHhhhCCEEEEec---------CCCeEEEEeecCC----CHHHHHHHHHHHhc
Confidence            111112222222   579888432         1268999887554    47999999998864

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=99.91  E-value=1.9e-22  Score=213.11  Aligned_cols=320  Identities=18%  Similarity=0.180  Sum_probs=210.0

Q ss_pred             cHHHHHHHhhhhhccCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc--CC
Q 009673          115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP  191 (529)
Q Consensus       115 ~~~V~eal~~~l~~~y~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--~p  191 (529)
                      +|.|++++...+ .+|..+..+.|.+.|. +...++|    +++++++|.+.     .|.++||++||..++.++.  .|
T Consensus        62 ~p~v~~a~~~~~-~~~~~~~~~s~~~~~~~~~~~~Le----~~la~~~g~~~-----~i~~~sG~~a~~~~i~~l~~~~~  131 (410)
T PRK13392         62 HPDVIGAMVDAL-DRYGAGAGGTRNISGTSHPHVLLE----RELADLHGKES-----ALLFTSGYVSNDAALSTLGKLLP  131 (410)
T ss_pred             CHHHHHHHHHHH-HHcCCCCchhhhcccChHHHHHHH----HHHHHHhCCCC-----EEEECcHHHHHHHHHHHHhcCCC
Confidence            789999998766 4565555555544433 3445555    77889999753     4667999999998888775  48


Q ss_pred             CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEEEEcCCCCCC--CC
Q 009673          192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAGASAYPR--DF  266 (529)
Q Consensus       192 GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~---~~pklIi~~~s~~p~--~~  266 (529)
                      ||.|+...+.|++.+.        .+...|.  ++..++.      .|.+++++.+..   .++++|++++++||+  ..
T Consensus       132 g~~vi~~~~~h~s~~~--------~~~~~g~--~~~~~~~------~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~  195 (410)
T PRK13392        132 GCVILSDALNHASMIE--------GIRRSGA--EKQVFRH------NDLADLEEQLASVDPDRPKLIAFESVYSMDGDIA  195 (410)
T ss_pred             CCEEEEehhhhHHHHH--------HHHHcCC--eEEEEeC------CCHHHHHHHHHhccCCCCEEEEEeCCCCCCcccc
Confidence            9988877666654321        2233454  3333321      245555555542   368899999888776  78


Q ss_pred             CHHHHHHHHHHhCCEEEEecccccccccc-c--cc--CCCCCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhc
Q 009673          267 DYPRMRQIADAVGALLMMDMAHISGLVAA-S--VV--ADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAIN  341 (529)
Q Consensus       267 d~~~i~~ia~~~g~~livD~ah~~Gli~~-~--~~--~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~  341 (529)
                      |+++|.++|+++|+++++|++|..|.... +  ..  ....+..|++++|++|++++ .|||+++++      ++.+.++
T Consensus       196 ~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~-~GG~~~~~~------~~~~~l~  268 (410)
T PRK13392        196 PIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGC-LGGYIAASA------DLIDFVR  268 (410)
T ss_pred             cHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhc-ccchhhcCH------HHHHHHH
Confidence            99999999999999999999998776422 1  10  01112468999999999854 468998876      6666555


Q ss_pred             ccccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHH
Q 009673          342 NAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGAR  420 (529)
Q Consensus       342 ~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~  420 (529)
                      +...+.. ..+.+....+++..+|+....  .....+++.++++++.+.|++.|+++..+  +++++.+.+. ...+..+
T Consensus       269 ~~~~~~~~s~~~~~~~~~a~~aaL~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~~~i~~~-~~~~~~~  343 (410)
T PRK13392        269 SFAPGFIFTTALPPAVAAGATAAIRHLKT--SQTERDAHQDRVAALKAKLNANGIPVMPS--PSHIVPVMVG-DPTLCKA  343 (410)
T ss_pred             HhCcchhccCcCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCCCC--CCCEEEEEeC-CHHHHHH
Confidence            4332221 222222344555567776533  23456778888999999999889887643  3444444342 1112345


Q ss_pred             HHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          421 VEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       421 ~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +.+.| +++||.+.....|+-  +.+.++|||+.+...    +++|++++++.|.++++
T Consensus       344 ~~~~L~~~~GI~v~~~~~p~~--~~~~~~lRis~~~~~----t~edid~l~~aL~~~~~  396 (410)
T PRK13392        344 ISDRLMSEHGIYIQPINYPTV--PRGTERLRITPTPLH----DDEDIDALVAALVAIWD  396 (410)
T ss_pred             HHHHHHHhCCEEEeeeCCCCC--CCCCceEEEEECCCC----CHHHHHHHHHHHHHHHH
Confidence            66666 678999976433321  223468999987654    58999999999988865

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=99.91  E-value=1.2e-22  Score=216.04  Aligned_cols=275  Identities=15%  Similarity=0.157  Sum_probs=189.1

Q ss_pred             eeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh
Q 009673          171 NVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL  249 (529)
Q Consensus       171 ~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~  249 (529)
                      +|.+++|+ +|+..++.++++|||.|++.+|.|.++..        .+...|.  ++++++++. + .+|+|+++++++.
T Consensus       143 ~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~-~-g~~~~~l~~~~~~  210 (431)
T PRK15481        143 EIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSIN--------MLRYAGF--SASPVSVDA-E-GMQPEKLERALAQ  210 (431)
T ss_pred             eEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH--------HHHHcCC--eEEeeccCC-C-CCCHHHHHHHHhc
Confidence            56778988 99999999999999999999998765431        3344565  677777763 2 4899999999876


Q ss_pred             cCCcEEEEc-CCCCCC--CCCH---HHHHHHHHHh-CCEEEEecccccccccccccCCCCC---cccEEEecccccc-cC
Q 009673          250 FRPKLIIAG-ASAYPR--DFDY---PRMRQIADAV-GALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSL-RG  318 (529)
Q Consensus       250 ~~pklIi~~-~s~~p~--~~d~---~~i~~ia~~~-g~~livD~ah~~Gli~~~~~~~~~~---~aDiv~~S~hK~l-~G  318 (529)
                       ++|+++++ +|+||+  ..+.   ++|.++|+++ +++||+|+++ ..+...+ ...++.   .--+++.|+||++ +|
T Consensus       211 -~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y-~~~~~~~-~~~~~~~~~~~vi~~~SfSK~~~~G  287 (431)
T PRK15481        211 -GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHF-ALLSSSP-YHSVIPQTTQRWALIRSVSKALGPD  287 (431)
T ss_pred             -CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCch-hhhccCC-CCCCCcCCCCCEEEEeeeccccCCC
Confidence             89998887 899997  5554   4899999999 9999999984 4443322 122222   1238889999987 78


Q ss_pred             CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHHHhcCcEE
Q 009673          319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-SPEFKVYQNKVVSNCRALASRLVELGYKL  397 (529)
Q Consensus       319 prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-~~~~~~~~~~i~~~a~~l~~~L~~~G~~v  397 (529)
                      +|.||++.++      ++.+.+.........+.+.. ...+++.+|+.-. ....++.++.+.++++.+.+.|++.|+.+
T Consensus       288 lRiG~~i~~~------~~~~~~~~~~~~~~~~~s~~-~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~  360 (431)
T PRK15481        288 LRLAFVASDS------ATSARLRLRLNSGTQWVSHL-LQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAI  360 (431)
T ss_pred             ceeEEEeCCH------HHHHHHHHHHhccccCCCHH-HHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence            8899999987      67666654322222222233 2333333454210 01135667788899999999999888876


Q ss_pred             ecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          398 VSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       398 ~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      ..+ ..++++|++++.   +..++.+.|.++||.+.++...+.  ....+++||++..     .+++++++.++.|++++
T Consensus       361 ~~p-~gg~f~~~~l~~---~~~~~~~~l~~~gV~v~pg~~f~~--~~~~~~iRis~~~-----~~~~~i~~~~~~l~~~~  429 (431)
T PRK15481        361 PSP-GDGLNLWLPLDT---DSQATALTLAKSGWLVREGEAFGV--SAPSHGLRITLST-----LNDAEINRLAADLHQAL  429 (431)
T ss_pred             ccC-CCeEEEEEECCC---CHHHHHHHHHHCCcEEecCCcccc--CCCCCeEEEEcCC-----CChHHHHHHHHHHHHHh
Confidence            433 235677888753   346677777789999954332211  1123579999754     34799999999998876


Q ss_pred             H
Q 009673          478 E  478 (529)
Q Consensus       478 ~  478 (529)
                      +
T Consensus       430 ~  430 (431)
T PRK15481        430 N  430 (431)
T ss_pred             c
Confidence            4

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=99.91  E-value=1.7e-22  Score=216.35  Aligned_cols=343  Identities=17%  Similarity=0.136  Sum_probs=216.0

Q ss_pred             cceeEecCCCCCcHHHHHHHhhhhhc----cCC-C-CCCCCCCCCCchhHHHHHHHHHHHHHHHcC----CCCCCCceee
Q 009673          103 KSLELIASENFTSRAVMEAVGSCLTN----KYS-E-GLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNV  172 (529)
Q Consensus       103 ~~i~L~asen~~~~~V~eal~~~l~~----~y~-~-G~p~~r~~~g~~~~d~lE~~a~~~la~~~g----~~~~~~~~~V  172 (529)
                      ..|+|..+||..+..+++.......+    .+. . -.....+|+......++.+.+.+++.+.+|    ++++    +|
T Consensus        39 g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~----~I  114 (468)
T PLN02450         39 GIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPN----KL  114 (468)
T ss_pred             eeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChH----He
Confidence            45899999997665555554333211    000 0 000011122222234566666677877766    3443    57


Q ss_pred             ecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccc-cccceEEEEEcccCC-CCCCCCHHHHHHHhhh
Q 009673          173 QPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDE-STGLVDYDMLEKTAIL  249 (529)
Q Consensus       173 ~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~-~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~  249 (529)
                      .+++|+ +++..++.++++|||.|++++|.|.++..        .+. ..|.  ++++++++. +++.+|++++++.+++
T Consensus       115 iit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~--------~~~~~~g~--~~v~v~~~~~~~~~~~~~~le~~~~~  184 (468)
T PLN02450        115 VLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDR--------DLKWRTGV--EIVPIHCSSSNGFQITESALEEAYQQ  184 (468)
T ss_pred             EEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHH--------HHhhcCCc--EEEEEecCCccCCcCCHHHHHHHHHH
Confidence            789998 89999999999999999999998765421        222 2454  677777753 4578899999988764


Q ss_pred             -----cCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccc-cCCCC------------Cc-c
Q 009673          250 -----FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF------------KY-C  305 (529)
Q Consensus       250 -----~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~~------------~~-a  305 (529)
                           .++|+|++++|+||+  ..   .+++|.++|++||++||+|++ |.++.+.+. ..+.+            .. -
T Consensus       185 ~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~-Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~  263 (468)
T PLN02450        185 AQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEI-YSGTVFDSPGFVSVMEVLKDRKLENTDVSNR  263 (468)
T ss_pred             HHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEcc-ccccccCCCCcccHHHHhhhcccccCCCCCc
Confidence                 378999998999997  33   467788889999999999998 444443321 11111            01 1


Q ss_pred             cEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc--CchHHHHHHHHHH
Q 009673          306 DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ--SPEFKVYQNKVVS  381 (529)
Q Consensus       306 Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~--~~~~~~~~~~i~~  381 (529)
                      -+++.|++|.+  +|.|.||++++++     .+.+.+.+.. .. ...+... ..+++.+|+.-.  ...+++.++++.+
T Consensus       264 vi~l~S~SK~~~l~GlRiG~li~~~~-----~l~~~~~~~~-~~-~~~s~~~-Q~a~~~~L~~~~~~~~~l~~~~~~l~~  335 (468)
T PLN02450        264 VHIVYSLSKDLGLPGFRVGAIYSNDE-----MVVSAATKMS-SF-GLVSSQT-QYLLSALLSDKKFTKNYLEENQKRLKQ  335 (468)
T ss_pred             EEEEEeccccCCCCCccEEEEEECCH-----HHHHHHHHHh-hc-CCCCHHH-HHHHHHHhCCchhHHHHHHHHHHHHHH
Confidence            27889999986  8999999999863     3444443321 11 1122232 223333343210  0123566788888


Q ss_pred             HHHHHHHHHHhcCcEEecCCCCCceEEEccCCC----CCcH-H-HHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccC
Q 009673          382 NCRALASRLVELGYKLVSGGSDNHLVLVDLRPM----GIDG-A-RVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSP  454 (529)
Q Consensus       382 ~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~----~i~~-~-~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~  454 (529)
                      +++.+.+.|++.|+.+..+ ..+.++|++++..    .... . .+.++|+++||.+.    ||.. ....++++||++.
T Consensus       336 rr~~l~~~L~~~gi~~~~~-~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~----PG~~f~~~~~g~~Rl~f~  410 (468)
T PLN02450        336 RQKKLVSGLEAAGIKCLKS-NAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNIS----PGSSCHCTEPGWFRVCFA  410 (468)
T ss_pred             HHHHHHHHHHHcCCcccCC-CceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEe----CccccCCCCCCEEEEEec
Confidence            8999999999888876543 2355778887521    1111 1 24455678999994    5543 2224679999975


Q ss_pred             CCccCCCCHHHHHHHHHHHHHHHH
Q 009673          455 AMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       455 ~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .     .+++++++..+.|++++.
T Consensus       411 ~-----~~~~~l~~~l~ri~~~l~  429 (468)
T PLN02450        411 N-----MSEETLDLAMKRLKSFVE  429 (468)
T ss_pred             C-----CCHHHHHHHHHHHHHHHH
Confidence            3     347899999999888775

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=99.91  E-value=9.7e-23  Score=211.83  Aligned_cols=309  Identities=17%  Similarity=0.185  Sum_probs=213.0

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.|.|..+||+  +|+.+++++...+.+..  .||.    .|   ..++.    +.+++.+|++++    +|.+++|+ +
T Consensus        30 ~~i~l~~nen~~~~~~~v~~a~~~~~~~~~--~Yp~----~g---~~~Lr----~aia~~~~~~~~----~I~vt~Gs~e   92 (366)
T PRK01533         30 SFVKLASNENPFGCSPRVLDELQKSWLDHA--LYPD----GG---ATTLR----QTIANKLHVKME----QVLCGSGLDE   92 (366)
T ss_pred             ceEEeCCCCCCCCCCHHHHHHHHHHHHhcC--cCCC----CC---HHHHH----HHHHHHhCCCcc----eEEECCCHHH
Confidence            56899999985  68899999987654321  1332    11   22333    566778899875    56678998 8


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      ++..++.++++|||+|++++|.|.++.        ......|.  +++.++++  ++.+|++++++.+++ ++++|++++
T Consensus        93 ~i~~~~~~l~~~gd~vlv~~P~y~~~~--------~~~~~~g~--~v~~v~~~--~~~~d~~~l~~~~~~-~~~~v~i~~  159 (366)
T PRK01533         93 VIQIISRAVLKAGDNIVTAGATFPQYR--------HHAIIEGC--EVKEVALN--NGVYDLDEISSVVDN-DTKIVWICN  159 (366)
T ss_pred             HHHHHHHHhcCCCCEEEEcCCcHHHHH--------HHHHHcCC--EEEEeecC--CCCcCHHHHHHHhCc-CCcEEEEeC
Confidence            999999999999999999999775432        12334555  66666664  457999999998876 899999999


Q ss_pred             CCCCC--CCCHHHHHHHHH---HhCCEEEEecccccccccccccCCCC---C-c-ccEEEecccccc--cCCCCeEEEee
Q 009673          260 SAYPR--DFDYPRMRQIAD---AVGALLMMDMAHISGLVAASVVADPF---K-Y-CDVVTTTTHKSL--RGPRGGMIFFK  327 (529)
Q Consensus       260 s~~p~--~~d~~~i~~ia~---~~g~~livD~ah~~Gli~~~~~~~~~---~-~-aDiv~~S~hK~l--~GprgG~i~~~  327 (529)
                      |+||+  ..+.+++.+|++   +++ ++|+|++++ .+...+..+..+   . + --+++.|++|++  +|+|.||++++
T Consensus       160 P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~  237 (366)
T PRK01533        160 PNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYY-EYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH  237 (366)
T ss_pred             CCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHH-HhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC
Confidence            99997  566666555554   444 677899864 444322111111   1 1 237889999986  78999999998


Q ss_pred             CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchH-HHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673          328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL  406 (529)
Q Consensus       328 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~  406 (529)
                      +      ++.+.+.....+  .+.+.. ...++..+|+   ..++ ++..+.+.++++.+.+.|+..|+++..+  +..+
T Consensus       238 ~------~~~~~l~~~~~~--~~~~~~-~q~aa~~~l~---~~~~~~~~~~~~~~~r~~~~~~l~~~g~~~~~~--~~nf  303 (366)
T PRK01533        238 E------ELIEKLNVVRLP--FNVSSL-AQKAATIAFG---DDEFIEEIVRVNTEGLRQYESFCKENEIPFYQS--QTNF  303 (366)
T ss_pred             H------HHHHHHHHhcCC--CCcCHH-HHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCC--cCcE
Confidence            7      777777654432  222222 3333333443   2333 5666777788888888888888876654  3556


Q ss_pred             EEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          407 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       407 ~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +|+.+.    +...+.+.|.++||.|..         + ++++||++.       +.++++++.++|++++.
T Consensus       304 ~~~~~~----~~~~~~~~l~~~GI~Vr~---------~-~~~iRis~~-------~~~~~~~l~~al~~~~~  354 (366)
T PRK01533        304 IFLPVE----NGGEIYEACAHAGFIIRP---------F-PNGVRITVG-------TREQNEGVISVLQQHFE  354 (366)
T ss_pred             EEEeCC----CHHHHHHHHHHCCcEEcc---------C-CCceEEeCC-------CHHHHHHHHHHHHHHHH
Confidence            788763    356788888899999963         1 467999863       36999999999988765

>PTZ00377 alanine aminotransferase; Provisional

Probab=99.91  E-value=4.5e-22  Score=214.24  Aligned_cols=332  Identities=14%  Similarity=0.102  Sum_probs=210.9

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhc-C
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAIL-K  190 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all-~  190 (529)
                      ..|..+++++...+.+.- .+   .-.|+...-..++++...+++.+..|.+.+.  -+|.+|+|+ +|+..++.+++ +
T Consensus        88 ~~P~~~~~~~~~~~~~~~-~~---~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~--~~I~it~Ga~~al~~~~~~l~~~  161 (481)
T PTZ00377         88 LFPADVVARAKEYLNAIG-GG---TGAYTDSAGYPFVRKAVAAFIERRDGVPKDP--SDIFLTDGASSGIKLLLQLLIGD  161 (481)
T ss_pred             cCCHHHHHHHHHHHHhCC-Cc---ccCcCcccCCHHHHHHHHHHHHHhcCCCCCh--hhEEEcCCHHHHHHHHHHHhccC
Confidence            346688888765543311 00   0112222234566666668888777765432  367789998 99999999998 7


Q ss_pred             CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhc-----CCcEEEEcCCCCCC
Q 009673          191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF-----RPKLIIAGASAYPR  264 (529)
Q Consensus       191 pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~-----~pklIi~~~s~~p~  264 (529)
                      |||.|++++|.|.++.        ..+...|.  +++.++++++ ++.+|+++|++.+++.     ++|+|++++|+||+
T Consensus       162 ~gD~Vlv~~P~y~~y~--------~~~~~~g~--~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPT  231 (481)
T PTZ00377        162 PSDGVMIPIPQYPLYS--------AAITLLGG--KQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPT  231 (481)
T ss_pred             CCCEEEECCCCchhHH--------HHHHHcCC--EEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCC
Confidence            9999999999776542        13345555  6677777654 4689999999998752     68988888899997


Q ss_pred             --CCC---HHHHHHHHHHhCCEEEEeccccccccccc--ccCCC------CC--c----ccEEEecccccc---cCCCCe
Q 009673          265 --DFD---YPRMRQIADAVGALLMMDMAHISGLVAAS--VVADP------FK--Y----CDVVTTTTHKSL---RGPRGG  322 (529)
Q Consensus       265 --~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~--~~~~~------~~--~----aDiv~~S~hK~l---~GprgG  322 (529)
                        ..+   +++|.++|++||++||+|+++ ..+++.+  ..++.      +.  +    .-+++.|++|++   +|+|.|
T Consensus       232 G~~~s~e~~~~i~~~a~~~~~~iI~De~Y-~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG  310 (481)
T PTZ00377        232 GQVLTRDVMEEIIKFCYEKGIVLMADEVY-QENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGG  310 (481)
T ss_pred             CcCCCHHHHHHHHHHHHHCCCEEEEehhh-HhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceE
Confidence              444   788999999999999999984 4554422  11110      11  1    126778999974   699999


Q ss_pred             EEEe---eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh--cCc---hH----HHHHHHHHHHHHHHHHHH
Q 009673          323 MIFF---KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA--QSP---EF----KVYQNKVVSNCRALASRL  390 (529)
Q Consensus       323 ~i~~---~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~--~~~---~~----~~~~~~i~~~a~~l~~~L  390 (529)
                      |+++   ++      ++.+++.+..... .+.+...+.+ +..+++..  ...   .+    +...+++.++++.+.+.|
T Consensus       311 ~~~~~~~p~------~li~~l~~~~~~~-~~~~~~~Q~a-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L  382 (481)
T PTZ00377        311 YFELTNIPP------EVREQIYKLASIN-LCSNVVGQLM-TGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDEL  382 (481)
T ss_pred             EEEEeCCCH------HHHHHHHHHhhee-cCCChHHHHH-HHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9987   44      6777665543222 2333333333 33344310  011   12    222234577888899999


Q ss_pred             Hhc-CcEEecCCCCCceEEEccC-CCC---------C--cHHHHHHhHhcCCeEEcCCCCCCCCC-C-CCCCeEEEccCC
Q 009673          391 VEL-GYKLVSGGSDNHLVLVDLR-PMG---------I--DGARVEKILDMASITLNKNSVPGDKS-A-LVPGGIRIGSPA  455 (529)
Q Consensus       391 ~~~-G~~v~~~gt~~~~~~v~~~-~~~---------i--~~~~~~~~L~~~GI~v~~~~~Pg~~~-~-~~~~~iRig~~~  455 (529)
                      ++. |+.+..+ ..++++|+++. +.+         +  +...+..+|++.||.+    .||+.. . ...+++||++. 
T Consensus       383 ~~~~g~~~~~p-~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v----~pG~~F~~~~~~~~~Rls~~-  456 (481)
T PTZ00377        383 NKIEGVSCQPV-EGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVV----VPGSGFGQKPGTYHFRITIL-  456 (481)
T ss_pred             hcCCCcEeecC-CeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEE----eCCcccCCCCCCCEEEEEEC-
Confidence            875 8887654 22456676653 111         1  1223567888999999    455441 1 13468999864 


Q ss_pred             CccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          456 MTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       456 ~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                           .+++++++..+.|.++++..
T Consensus       457 -----~~~e~l~~~l~rl~~~~~~~  476 (481)
T PTZ00377        457 -----PPEEQIEEMVKKIKEFHESF  476 (481)
T ss_pred             -----CCHHHHHHHHHHHHHHHHHH
Confidence                 34688999988888877643

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=99.91  E-value=5.3e-22  Score=207.74  Aligned_cols=333  Identities=19%  Similarity=0.181  Sum_probs=215.3

Q ss_pred             cceeEecCC--CC-CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHH
Q 009673          103 KSLELIASE--NF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP  179 (529)
Q Consensus       103 ~~i~L~ase--n~-~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~  179 (529)
                      +.|+|..++  .+ .++.+++++...+. ++...+...++..|.   ..+.+.+.+++++++|.+.     .|.+++|++
T Consensus        34 ~~id~~~~~~~g~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~g~---~~l~~~l~~~l~~~~g~~~-----~i~~~sG~~  104 (385)
T TIGR01825        34 EVINLSSNNYLGFADHPRLKEAAAQAIQ-QYGVGAGAVRTIAGT---LRLHEELEEKLAKFKKTEA-----ALVFQSGFN  104 (385)
T ss_pred             eEEEeeccCccCCCCCHHHHHHHHHHHH-HcCCCCCccCcccCC---cHHHHHHHHHHHHHhCCCc-----EEEECcHHH
Confidence            557887654  34 68899998887653 332222222223333   2333445588889999653     466799999


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc---CCcEEE
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLII  256 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~---~pklIi  256 (529)
                      ++..++.++++|||.|++.++.|+++..        .+...|.  +++.+      ..+|++++++.+++.   ++++|+
T Consensus       105 a~~~a~~~~~~~gd~vi~~~~~~~~~~~--------~~~~~g~--~~~~~------~~~d~~~l~~~l~~~~~~~~~~v~  168 (385)
T TIGR01825       105 TNQGVLSALLRKGDIVLSDELNHASIID--------GLRLTKA--TKKIY------KHADMDDLDRVLRENPSYGKKLIV  168 (385)
T ss_pred             HHHHHHHHhCCCCCEEEEEccccHHHHH--------HHHhcCC--ceEEe------CCCCHHHHHHHHHhhccCCCeEEE
Confidence            9999999999999999999887765431        1223333  33332      157888998877642   577888


Q ss_pred             EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccc-cc---cCCCC-CcccEEEecccccccCCCCeEEEeeCC
Q 009673          257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV---VADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKD  329 (529)
Q Consensus       257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~~---~~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~  329 (529)
                      ++...+++  ..|+++|.++|++||+++|+|++|..|.... +.   ....+ ...|+++.|+||++ |++|||+++++ 
T Consensus       169 ~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~gG~~~~~~-  246 (385)
T TIGR01825       169 TDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAI-GVVGGYAAGHK-  246 (385)
T ss_pred             EecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHh-hcCCCEEecCH-
Confidence            77655543  6799999999999999999999986664421 10   00112 24689999999998 56789998877 


Q ss_pred             CcchhHHHhhhcccccCCCCC-CChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEE
Q 009673          330 PVLGVELESAINNAVFPGLQG-GPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL  408 (529)
Q Consensus       330 ~~~~~~l~~~i~~~~~p~~~g-~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~  408 (529)
                           ++.+.+.....++..+ .++...++++..+++....  ..+..+++.++++.+.+.|.+.|+++..+.  ..++.
T Consensus       247 -----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--~~~~~  317 (385)
T TIGR01825       247 -----ELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKLGYDTGGSE--TPITP  317 (385)
T ss_pred             -----HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCCCCC--CCEEE
Confidence                 6666664432222222 2334445555566765432  234667778889999999998888876542  23333


Q ss_pred             EccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          409 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +.+.. ..+..++.+.|.+.||.+.....|..  +.....||++.+..    .+++|++++++.|+++++
T Consensus       318 ~~~~~-~~~~~~~~~~L~~~gi~v~~~~~~~~--~~~~~~iRi~~~~~----~~~e~i~~~~~~l~~~~~  380 (385)
T TIGR01825       318 VVIGD-EKAAQEFSRRLFDEGIFAQSIVFPTV--PRGTARIRNIPTAE----HTKDDLDQALDAYEKVGK  380 (385)
T ss_pred             EEECC-HHHHHHHHHHHHHCCcEEcccCCCCC--CCCCceEEEEEcCC----CCHHHHHHHHHHHHHHHH
Confidence            33321 12345666666666999854322211  12346799976543    458999999999998774

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=99.91  E-value=3.2e-22  Score=210.76  Aligned_cols=328  Identities=21%  Similarity=0.250  Sum_probs=214.5

Q ss_pred             EecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHH
Q 009673          107 LIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN  181 (529)
Q Consensus       107 L~asen~~----~~~V~eal~~~l~~~y~~G~p~~r~~~g-~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~  181 (529)
                      ...|.+|+    +|+|++|+...+ ++|..|..++|...| .+...++|    +.+++++|.+.     .+..+||++||
T Consensus        49 ~~~sn~ylgl~~~p~v~~a~~~~~-~~~~~~~~~s~~~~g~~~~~~~Le----~~la~~~g~~~-----~l~~~sG~~an  118 (402)
T TIGR01821        49 VWCSNDYLGMGQHPEVLQAMHETL-DKYGAGAGGTRNISGTNIPHVELE----AELADLHGKES-----ALVFTSGYVAN  118 (402)
T ss_pred             EeEccCcCCCCCCHHHHHHHHHHH-HHcCCCCcchhhhhCCcHHHHHHH----HHHHHHhCCCe-----EEEECchHHHH
Confidence            34567764    789999998777 456656556664433 44455555    77888999653     36679999999


Q ss_pred             HHHHHhhcC--CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEEE
Q 009673          182 FEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLII  256 (529)
Q Consensus       182 ~~~l~all~--pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~---~~pklIi  256 (529)
                      ..++..+..  +||.|+.....|++...        .+...|.  +...++      ..|++++++.++.   .++++|+
T Consensus       119 ~~ai~~l~~~~~~~~v~~~~~~h~s~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~~~~~v~  182 (402)
T TIGR01821       119 DATLATLAKIIPGCVIFSDELNHASMIE--------GIRHSGA--EKFIFR------HNDVAHLEKLLQSVDPNRPKIIA  182 (402)
T ss_pred             HHHHHHhhCCCCCCEEEEcchHhHHHHH--------HHHHcCC--eEEEEC------CCCHHHHHHHHHhccCCCCeEEE
Confidence            999988765  78888776555543321        1223343  333332      2477888887763   2578888


Q ss_pred             EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccc---cccC-CCC-CcccEEEecccccccCCCCeEEEeeCC
Q 009673          257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVVA-DPF-KYCDVVTTTTHKSLRGPRGGMIFFKKD  329 (529)
Q Consensus       257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~---~~~~-~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~  329 (529)
                      ++++++++  ..|+++|.++|++||+++++|++|..|....   +... ..+ ...|++++|++|++ |..|||+++++ 
T Consensus       183 ~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~-g~~GG~i~~~~-  260 (402)
T TIGR01821       183 FESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAF-GVVGGYIAASR-  260 (402)
T ss_pred             EcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhh-ccCCceeecCH-
Confidence            88776664  7899999999999999999999998775422   1111 111 13689999999998 45669998887 


Q ss_pred             CcchhHHHhhhcccccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEE
Q 009673          330 PVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL  408 (529)
Q Consensus       330 ~~~~~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~  408 (529)
                           ++.+.+.....+.. .++.+...+++...+++.+...  ....++..++++++.+.|++.|++++.+  .++++.
T Consensus       261 -----~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~i~~  331 (402)
T TIGR01821       261 -----KLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEALGIPVIPN--PSHIVP  331 (402)
T ss_pred             -----HHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHcCCCcCCC--CCCEEE
Confidence                 66666543221211 2223333444444577765432  4455666788999999999888876653  344544


Q ss_pred             EccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          409 VDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       409 v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +.+.. .....++.+.| ++.||.+.....|.-  +.+...|||+.+..    ++++|++++++.|+++++
T Consensus       332 i~~~~-~~~a~~~~~~L~~~~Gi~v~~~~~p~~--~~g~~~lRis~~~~----~t~edi~~~~~~l~~~~~  395 (402)
T TIGR01821       332 VIIGD-AALCKKVSDLLLNKHGIYVQPINYPTV--PRGTERLRITPTPA----HTDKMIDDLVEALLLVWD  395 (402)
T ss_pred             EEeCC-HHHHHHHHHHHHhcCCEEEEeECCCCC--CCCCceEEEEeCCC----CCHHHHHHHHHHHHHHHH
Confidence            44421 11234566665 567999976433321  22346899998765    458999999999998875

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]

Probab=99.91  E-value=6.3e-23  Score=207.69  Aligned_cols=347  Identities=19%  Similarity=0.199  Sum_probs=219.1

Q ss_pred             cceeEec-CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HH
Q 009673          103 KSLELIA-SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA  180 (529)
Q Consensus       103 ~~i~L~a-sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A  180 (529)
                      +.+.|.. +..+++++|++||..++.+.|  |.|..++| |.+..+.+| .+|+.+++++|+++.+    |..|+|+ ++
T Consensus        43 ~~vyld~~at~p~~~~Vldam~~~~~~~~--~nPh~~~y-~w~~~~~~E-~aR~~VAklInAd~~d----IiFts~ATEs  114 (428)
T KOG1549|consen   43 RPVYLDNQATGPMDPRVLDAMLPYLLEYL--GNPHSRSY-GWKAEDAVE-AAREQVAKLINADPSD----IVFTSGATES  114 (428)
T ss_pred             ccEEEecCcCCCCCHHHHHHHHHHHHHhh--cCCCcccc-chhhhHHHH-HHHHHHHHHhCCCCCc----EEEeCCchHH
Confidence            4566653 456889999999998887665  67877733 445556677 5789999999999974    4456665 99


Q ss_pred             HHHHHHhh-cCCCC----EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673          181 NFEVYTAI-LKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI  255 (529)
Q Consensus       181 ~~~~l~al-l~pGD----~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI  255 (529)
                      |.+++.++ ..++|    +|+.++.+|.++.-..       ..+...++++..+|++ +++.+|.+.+++.|++ +|+++
T Consensus       115 ~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~-------~~l~~~g~~Vt~lpv~-~~~~~d~~~~~~~i~~-~T~lv  185 (428)
T KOG1549|consen  115 NNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSC-------RALQEEGLEVTYLPVE-DSGLVDISKLREAIRS-KTRLV  185 (428)
T ss_pred             HHHHHHHhhccccccccceEEEecccCcchhHHH-------HHHHhcCeEEEEeccC-ccccccHHHHHHhcCC-CceEE
Confidence            99999887 55777    9999998887764221       1122233688888887 7799999999999999 99999


Q ss_pred             EEcC-CCCCC-CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcc
Q 009673          256 IAGA-SAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVL  332 (529)
Q Consensus       256 i~~~-s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~  332 (529)
                      .+.. ++.++ .+|+++|+++|++.|+.+++|+||..|.+..|+...   ++|++++|.|||+ ||+| |++++++... 
T Consensus       186 ~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~el---n~D~~s~s~HK~y-gp~~iGaLYvr~~~~-  260 (428)
T KOG1549|consen  186 SIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQEL---NADFLSISAHKIY-GPPGIGALYVRRKRP-  260 (428)
T ss_pred             EEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccHHHc---Cchheeeeccccc-CCCcceEEEEccCCC-
Confidence            8874 33344 789999999999999999999999999886665443   5899999999987 7776 9999987210 


Q ss_pred             hhHHHhhhcccccC------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cCcEEecCCCC-
Q 009673          333 GVELESAINNAVFP------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGGSD-  403 (529)
Q Consensus       333 ~~~l~~~i~~~~~p------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G~~v~~~gt~-  403 (529)
                        .+.  .......      ...|+.......++..|.+.+.. +..-....+.+....+...+..  ....+...+.. 
T Consensus       261 --~~~--~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~-~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~~~  335 (428)
T KOG1549|consen  261 --RLR--VEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNK-EMAYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGKSR  335 (428)
T ss_pred             --ccc--ccCcccCCccccccccCCcCchhhhhhHHHHHHHHh-hcchhHHHHHHHHHHHHHHHhhhCchhhccCCcccc
Confidence              010  0000011      12455566666677666665432 2122222223333444444322  12222221111 


Q ss_pred             -CceEEEccC-CCCCcH-HHHHHhHhcCCeEEcCCC-CC-------CCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673          404 -NHLVLVDLR-PMGIDG-ARVEKILDMASITLNKNS-VP-------GDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF  472 (529)
Q Consensus       404 -~~~~~v~~~-~~~i~~-~~~~~~L~~~GI~v~~~~-~P-------g~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~  472 (529)
                       ....-+.+. ..+... .+....-..-|..+..+. -|       |.......++||||...+|+    ++|++++++.
T Consensus       336 ~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t----~~di~~~~~~  411 (428)
T KOG1549|consen  336 YPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTT----EEDIDYLVDA  411 (428)
T ss_pred             cccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCc----HHHHHHHHHH
Confidence             111222222 112111 111111111222221111 11       11112346789999988876    8999999999


Q ss_pred             HHHHHHHH
Q 009673          473 IHEGVEIT  480 (529)
Q Consensus       473 i~~~~~~~  480 (529)
                      |.+.++..
T Consensus       412 i~~~v~~~  419 (428)
T KOG1549|consen  412 IKKLVSLL  419 (428)
T ss_pred             HHHHHHhc
Confidence            99888754

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.91  E-value=5.2e-22  Score=206.84  Aligned_cols=315  Identities=17%  Similarity=0.137  Sum_probs=209.2

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----  189 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all----  189 (529)
                      +.+.+.+++...+...  .|.++  .|.+.   ..+++.+++++++++|+++++   .+..++|++++..++.++.    
T Consensus        32 ~~~~~~~a~~~~~~~~--~~~~~--~~~~~---~~~~~~~~~~la~~~g~~~~~---~~~~~g~~~~~~~~~~~~~~~~~  101 (373)
T TIGR03812        32 PHPIAVKAYDMFIETN--LGDPG--LFPGT---KKIEEEVVGSLGNLLHLPDAY---GYIVSGGTEANIQAVRAAKNLAR  101 (373)
T ss_pred             chHHHHHHHHHHhhcC--CCCcc--cCccH---HHHHHHHHHHHHHHhCCCCCC---eEEeccHHHHHHHHHHHHHHHHh
Confidence            4455677776554332  23333  23332   344556779999999998642   2334555688887776653    


Q ss_pred             --CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCc-EEEEcCCCCCC--
Q 009673          190 --KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK-LIIAGASAYPR--  264 (529)
Q Consensus       190 --~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pk-lIi~~~s~~p~--  264 (529)
                        ++||+|+++++.|.+..        +.+...|.  +++.++++ +++.+|++++++.+++ ++. ++++. +++++  
T Consensus       102 ~~~~g~~vl~~~~~h~~~~--------~~~~~~G~--~~~~v~~~-~~~~~d~~~l~~~l~~-~~~~vv~~~-~~~~tG~  168 (373)
T TIGR03812       102 EEKRTPNIIVPESAHFSFE--------KAAEMLGL--ELRYAPLD-EDYTVDVKDVEDLIDD-NTIGIVGIA-GTTELGQ  168 (373)
T ss_pred             ccCCCcEEEECCcchHHHH--------HHHHHcCC--eEEEEeeC-CCCCcCHHHHHHHHhh-CcEEEEEEC-CCCCCCc
Confidence              47899999887664321        13344565  55556665 4678999999999977 564 44444 44443  


Q ss_pred             CCCHHHHHHHHHHhCCEEEEeccccccccccc---cc--CCCC--CcccEEEecccccccCC-CCeEEE-eeCCCcchhH
Q 009673          265 DFDYPRMRQIADAVGALLMMDMAHISGLVAAS---VV--ADPF--KYCDVVTTTTHKSLRGP-RGGMIF-FKKDPVLGVE  335 (529)
Q Consensus       265 ~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~---~~--~~~~--~~aDiv~~S~hK~l~Gp-rgG~i~-~~~~~~~~~~  335 (529)
                      ..|+++|.++|+++|+++++|+||..+.+...   ..  ...+  .++|++++|+|||+.+| ++|+++ .++      +
T Consensus       169 ~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~------~  242 (373)
T TIGR03812       169 IDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSK------S  242 (373)
T ss_pred             cCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCH------H
Confidence            77999999999999999999999875543211   11  1111  26899999999986444 445444 454      5


Q ss_pred             HHhhhcccccCCC--------CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673          336 LESAINNAVFPGL--------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV  407 (529)
Q Consensus       336 l~~~i~~~~~p~~--------~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~  407 (529)
                      +.+.++.. .++.        .|+++...++++..+++.+...++++..++..+++++|.+.|++.|+..+.+. ..+++
T Consensus       243 ~~~~l~~~-~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~v  320 (373)
T TIGR03812       243 YLKYLSVD-APYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIEP-VLNIV  320 (373)
T ss_pred             HHhhhccc-CcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCC-CceEE
Confidence            55554321 1211        25666677888888888776667788899999999999999999887654332 23444


Q ss_pred             EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      .+.+.    +...+.+.|.+.||.+....        .+..||++++..    .+++|++++++.|++
T Consensus       321 ~~~~~----~~~~v~~~L~~~gi~v~~~~--------~~~~iRis~~~~----~t~edid~l~~~L~~  372 (373)
T TIGR03812       321 AFEVD----DPEEVRKKLRDRGWYVSVTR--------CPKALRIVVMPH----VTREHIEEFLEDLKE  372 (373)
T ss_pred             EEEeC----CHHHHHHHHHHCCceeccCC--------CCCEEEEEEECC----CCHHHHHHHHHHHhh
Confidence            44432    24578888888899985421        246899998654    458999999999875

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=99.91  E-value=1.6e-22  Score=208.13  Aligned_cols=301  Identities=14%  Similarity=0.098  Sum_probs=190.9

Q ss_pred             cHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC-hHHHHHHHHHhhcCCCC
Q 009673          115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPANFEVYTAILKPHD  193 (529)
Q Consensus       115 ~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s-Gs~A~~~~l~all~pGD  193 (529)
                      .|.++++....+ ++|. |        ..+..+++|    +.+++++|+++++    +.+++ |++||..++.++++|||
T Consensus        35 ~~~~~~~~~~~~-~~~~-g--------~~~~~~~Le----~~lA~~~g~~~e~----ilv~~gg~~a~~~~~~al~~~gd   96 (346)
T TIGR03576        35 GFKIDEEDLELL-ETYV-G--------PAIFEEKVQ----ELGREHLGGPEEK----ILVFNRTSSAILATILALEPPGR   96 (346)
T ss_pred             ChhHHHHHHHHH-HHhc-C--------CHHHHHHHH----HHHHHHcCCCcce----EEEECCHHHHHHHHHHHhCCCCC
Confidence            577777776554 3441 1        124445555    7889999997653    33344 55999999999999999


Q ss_pred             EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-C---CCHH
Q 009673          194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-D---FDYP  269 (529)
Q Consensus       194 ~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~---~d~~  269 (529)
                      +|+++.|+...|.+..     ..+.+.|.  +++.+        .|+++++. . + ++++|+++.+++.+ .   .+++
T Consensus        97 ~Vli~~~d~p~~~s~~-----~~~~l~ga--~~~~~--------~~l~~l~~-~-~-~~~lIiitg~s~~G~v~~~~~L~  158 (346)
T TIGR03576        97 KVVHYLPEKPAHPSIP-----RSCKLAGA--EYFES--------DELSELKK-I-D-GTSLVVITGSTMDLKVVSEEDLK  158 (346)
T ss_pred             EEEECCCCCCCchhHH-----HHHHHcCC--EEecc--------CCHHHHhh-C-c-CceEEEEECCCCCCcccCHHHHH
Confidence            9998655444443221     13444554  32221        24555432 2 3 68888876544333 3   5899


Q ss_pred             HHHHHHHHhCCEEEEecccccccccc-cccCCCCC-cccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcccccCC
Q 009673          270 RMRQIADAVGALLMMDMAHISGLVAA-SVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG  347 (529)
Q Consensus       270 ~i~~ia~~~g~~livD~ah~~Gli~~-~~~~~~~~-~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~  347 (529)
                      +|+++|+++|++|++|+||..|.... +. ..... +.|++++|+||+++|+|+||+++++      ++.+.+.+...+.
T Consensus       159 ~i~~la~~~~~~livDEAy~~~~~~~~~~-~~~~~~~~divv~s~SKalaG~r~G~v~~~~------~li~~l~~~~~~~  231 (346)
T TIGR03576       159 RVIKQAKSKEAIVLVDDASGARVRRLYGQ-PPALDLGADLVVTSTDKLMDGPRGGLLAGRK------ELVDKIKSVGEQF  231 (346)
T ss_pred             HHHHHHHHcCCEEEEECCccccccccCCC-CCHHHcCCcEEEeccchhccccceEEEEeCH------HHHHHHHHhhcCc
Confidence            99999999999999999998765321 11 11111 4689999999999999999999998      7777776654444


Q ss_pred             CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhc
Q 009673          348 LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDM  427 (529)
Q Consensus       348 ~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~  427 (529)
                      ..+.+.. ..++...+|+...   .+...+.+.++++.+.+.+.+  +.+...  ...++++++.... +.+.+.++|++
T Consensus       232 ~~s~~~~-~~~aa~~aL~~~~---~~~~~~~l~~r~~~~~~~l~~--~~~~~~--~~~f~~~~~~~~~-~~~~~~~ll~~  302 (346)
T TIGR03576       232 GLEAQAP-LLAAVVRALEEFE---LSRIRDAFKRKEEVYLRLFDK--LNVERT--PTGFVIKGVEEEK-LIEIGLDLLRN  302 (346)
T ss_pred             ccCccHH-HHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHh--CCCCcC--CCeEEEEeCCCCC-HHHHHHHHHHh
Confidence            3333333 4444445676432   244556666777766677764  444332  2346787875311 23667889999


Q ss_pred             CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHH---HHHHHHHHHHHHH
Q 009673          428 ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK---EFVAIADFIHEGV  477 (529)
Q Consensus       428 ~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~---d~~~la~~i~~~~  477 (529)
                      +||.+.    |+...+..++++||++.      ..++   +++++.+.|++.+
T Consensus       303 ~gV~v~----~~~~f~~~~~~vRis~~------~~~~~~~~~~~~~~al~~~~  345 (346)
T TIGR03576       303 YGIITI----TAVGMPGASKTLRFDLA------AKDAERIGDDYLVEAVKDSL  345 (346)
T ss_pred             CCEEEe----CCcccCCCCCeEEEEEe------cChHHhcCHHHHHHHHHhcc
Confidence            999995    44321223678999853      1233   6999998887643

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.91  E-value=4.3e-22  Score=208.64  Aligned_cols=335  Identities=13%  Similarity=0.093  Sum_probs=215.7

Q ss_pred             cCCCCC----cHHHHHHHhhhhhccCCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673          109 ASENFT----SRAVMEAVGSCLTNKYSEGLPGKRY-YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE  183 (529)
Q Consensus       109 asen~~----~~~V~eal~~~l~~~y~~G~p~~r~-~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~  183 (529)
                      +|.+|+    .|+++++....+ .+|..|..+.|. |+......++|    +++++++|.+.     .+.++||+.|+..
T Consensus         4 ~s~dyLgl~~~~~~~~~~~~a~-~~~g~~~~~sr~~yg~~~~~~~LE----~~lA~~~g~e~-----al~~~sG~~a~~~   73 (392)
T PLN03227          4 ATHDFLSTSSSPTLRQTALESL-SHYGCGSCGPRGFYGTIDAHLELE----QCMAEFLGTES-----AILYSDGASTTSS   73 (392)
T ss_pred             cCcCccCCCCCHHHHHHHHHHH-HHhCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHH
Confidence            455554    688999888776 467777777774 44445566777    78899999975     3667999999999


Q ss_pred             HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh----------cCCc
Q 009673          184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL----------FRPK  253 (529)
Q Consensus       184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~----------~~pk  253 (529)
                      ++.++++|||+|++.++.|++.+.        .+.+.+.  +++.++.+   ..-|++.+.+.+..          .+++
T Consensus        74 ~i~~l~~~GD~Vl~~~~~h~s~~~--------~~~l~~~--~~~~~~~~---d~~~l~~~~~~i~~~~~a~~~~~~~~t~  140 (392)
T PLN03227         74 TVAAFAKRGDLLVVDRGVNEALLV--------GVSLSRA--NVRWFRHN---DMKDLRRVLEQVRAQDVALKRKPTDQRR  140 (392)
T ss_pred             HHHHhCCCCCEEEEeccccHHHHH--------HHHHcCC--eEEEeCCC---CHHHHHHHHHHhhhhccccccccCCCcE
Confidence            999999999999999987765432        1223332  45454432   11233333334321          1467


Q ss_pred             EEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccc---ccc----CCCCCcccEEEecccccccCCCCeEE
Q 009673          254 LIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVV----ADPFKYCDVVTTTTHKSLRGPRGGMI  324 (529)
Q Consensus       254 lIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~---~~~----~~~~~~aDiv~~S~hK~l~GprgG~i  324 (529)
                      +|++.++.+++  ..|+++|+++|++||+++|+|++|..|....   +..    ..|..++|++++|++|.+ ||.||++
T Consensus       141 ~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~-g~~gg~v  219 (392)
T PLN03227        141 FLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAF-GSVGGMT  219 (392)
T ss_pred             EEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhh-hccCcEE
Confidence            88887655443  7899999999999999999999998665422   110    012336799999999985 7999999


Q ss_pred             EeeCCCcchhHHHhhhcccccCCCCCCC--hHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC--
Q 009673          325 FFKKDPVLGVELESAINNAVFPGLQGGP--HNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG--  400 (529)
Q Consensus       325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p--~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~--  400 (529)
                      ++++      ++.+.+.........++.  .....+++ .+++....  .++..+++.++.++|.+.|++.+++.+.+  
T Consensus       220 ~~~~------~~~~~~~~~~~~~~~~~~~~p~~~~aa~-~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~r  290 (392)
T PLN03227        220 VGSE------EVVDHQRLSGSGYCFSASAPPFLAKADA-TATAGELA--GPQLLNRLHDSIANLYSTLTNSSHPYALKLR  290 (392)
T ss_pred             ecCH------HHHHHHHHhCcCccccCCCCHHHHHHHH-HHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence            8887      566554332222233432  22334443 34544322  24677888999999999998755542211  


Q ss_pred             -------CCCCceEEEccCCCCCc--------HHHHHHhHhcCCeEEcCCC-CCCCC-CCCCCCeEEEccCCCccCCCCH
Q 009673          401 -------GSDNHLVLVDLRPMGID--------GARVEKILDMASITLNKNS-VPGDK-SALVPGGIRIGSPAMTTRGFSE  463 (529)
Q Consensus       401 -------gt~~~~~~v~~~~~~i~--------~~~~~~~L~~~GI~v~~~~-~Pg~~-~~~~~~~iRig~~~~tt~g~~~  463 (529)
                             .+.++++.+.+.+...+        ...+.+.|.+.||.+.... .|... ....+..||+.+++    ++++
T Consensus       291 g~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~----~~t~  366 (392)
T PLN03227        291 NRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANA----SHTR  366 (392)
T ss_pred             cccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecC----CCCH
Confidence                   12344555555321111        1367778888999885311 11100 11124679998754    5779


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 009673          464 KEFVAIADFIHEGVEIT  480 (529)
Q Consensus       464 ~d~~~la~~i~~~~~~~  480 (529)
                      +|++++++.|++++...
T Consensus       367 eei~~~~~~l~~~~~~~  383 (392)
T PLN03227        367 EDIDKLLTVLGEAVEAI  383 (392)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999998654

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=99.91  E-value=5.2e-22  Score=209.12  Aligned_cols=340  Identities=16%  Similarity=0.098  Sum_probs=211.8

Q ss_pred             hcceeEecCCC------CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC--CCCCCCceeee
Q 009673          102 FKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQ  173 (529)
Q Consensus       102 ~~~i~L~asen------~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g--~~~~~~~~~V~  173 (529)
                      ++.++|..++.      .+++.+++++...+......+|..   ..|   ..++++...+++.+ .+  ++++    +|.
T Consensus        31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g---~~~lr~aia~~~~~-~~~~~~~~----~i~   99 (401)
T TIGR01264        31 KPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAP---TVG---ALSAREAIASYYHN-PDGPIEAD----DVV   99 (401)
T ss_pred             CCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCC---CCC---CHHHHHHHHHHHhh-cCCCCCHH----HEE
Confidence            35588876553      367889999887665432123321   112   23444333344433 22  3333    466


Q ss_pred             cCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcC
Q 009673          174 PLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFR  251 (529)
Q Consensus       174 ~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~  251 (529)
                      +++|+ +|+..++.++++|||+|++++|.|..+.        ......|.  ++++++++.+ ++.+|++.+++.++. +
T Consensus       100 ~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~--------~~~~~~g~--~v~~~~~~~~~~~~~d~~~l~~~~~~-~  168 (401)
T TIGR01264       100 LCSGCSHAIEMCIAALANAGQNILVPRPGFPLYE--------TLAESMGI--EVKLYNLLPDKSWEIDLKQLESLIDE-K  168 (401)
T ss_pred             ECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHH--------HHHHHcCC--EEEEeecCCccCCCCCHHHHHHHhcc-C
Confidence            68877 9999999999999999999998765432        12334454  5666666533 578999999998876 7


Q ss_pred             CcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-cc-cEEEeccccc--ccCC
Q 009673          252 PKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YC-DVVTTTTHKS--LRGP  319 (529)
Q Consensus       252 pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~-~a-Div~~S~hK~--l~Gp  319 (529)
                      +++|++++|+||+  ..   ++++|.++|+++|++|++|++ |..+.+.+....++   . .. -|++.|++|+  ++|.
T Consensus       169 ~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~-y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl  247 (401)
T TIGR01264       169 TAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEI-YGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGW  247 (401)
T ss_pred             ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhh-hhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccc
Confidence            8999999999997  33   588899999999999999998 44555433211121   1 11 2778999997  4899


Q ss_pred             CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEe
Q 009673          320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLV  398 (529)
Q Consensus       320 rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~  398 (529)
                      |.||+++++......++.+.+.....+. .+.+.. ...++..++.......+++.++++.++++.+.+.|++. |+.+.
T Consensus       248 RiG~iv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~  325 (401)
T TIGR01264       248 RLGWIIIHDRRGILRDIRDGLVKLSQRI-LGPCTI-VQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPV  325 (401)
T ss_pred             eEEEEEecCcchhHHHHHHHHHHHhhcc-CCCCcH-HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCccc
Confidence            9999998752100112333333221111 111122 22333334543112334777888888999999999885 66644


Q ss_pred             cCCCCCceEEEccCC----CCCcHHHHH-HhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673          399 SGGSDNHLVLVDLRP----MGIDGARVE-KILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI  473 (529)
Q Consensus       399 ~~gt~~~~~~v~~~~----~~i~~~~~~-~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i  473 (529)
                      .+ ....++|+++..    ...+..++. .+++++||.+.    ||.... .++++||++.      ..++++++..+.|
T Consensus       326 ~p-~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~----pg~~f~-~~~~iRis~~------~~~~~l~~~l~rl  393 (401)
T TIGR01264       326 MP-SGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCL----PGSCFE-YPGFFRVVLT------VPVVMMEEACSRI  393 (401)
T ss_pred             CC-CeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEe----CchhcC-CCCeEEEEEc------CCHHHHHHHHHHH
Confidence            33 235677887642    122445554 44578999994    443311 3579999864      2367888888888


Q ss_pred             HHHHH
Q 009673          474 HEGVE  478 (529)
Q Consensus       474 ~~~~~  478 (529)
                      .+.++
T Consensus       394 ~~~~~  398 (401)
T TIGR01264       394 QEFCE  398 (401)
T ss_pred             HHHHh
Confidence            77654

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=99.91  E-value=2.3e-22  Score=212.46  Aligned_cols=342  Identities=16%  Similarity=0.142  Sum_probs=217.2

Q ss_pred             hcceeEecCCC------CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC--------CCCCC
Q 009673          102 FKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--------LDENK  167 (529)
Q Consensus       102 ~~~i~L~asen------~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g--------~~~~~  167 (529)
                      .+.|+|..++.      ++++.+.+++...+......+|+.      .....++++.+.+++.+.++        ++++ 
T Consensus        33 ~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~------~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~-  105 (412)
T PTZ00433         33 KSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPP------TVGSPEAREAVATYWRNSFVHKESLKSTIKKD-  105 (412)
T ss_pred             CCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCC------CCCcHHHHHHHHHHHHhhccccccccCCCChh-
Confidence            35678876553      468899999887665321123332      22234566555566666553        3443 


Q ss_pred             CceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHH
Q 009673          168 WGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEK  245 (529)
Q Consensus       168 ~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~  245 (529)
                         +|.+|+|+ +++..++.++++|||+|++++|.|..+..        .....|.  +++.++++++ ++.+|++++++
T Consensus       106 ---~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~i~~~~~~~~~~d~~~l~~  172 (412)
T PTZ00433        106 ---NVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYET--------VCKAYGI--EMRFYNCRPEKDWEADLDEIRR  172 (412)
T ss_pred             ---hEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHH--------HHHHcCC--EEEEEecCccccCcCCHHHHHH
Confidence               56678887 99999999999999999999998755421        2334454  5666666543 57899999999


Q ss_pred             HhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCC---CC--cccEEEeccccc
Q 009673          246 TAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK--YCDVVTTTTHKS  315 (529)
Q Consensus       246 ~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~~--~aDiv~~S~hK~  315 (529)
                      .+++ ++++|++++|+||+  ..   ++++|.++|+++|++||+|+++ ..+.+.+....+   +.  ..-+++.|++|+
T Consensus       173 ~~~~-~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~  250 (412)
T PTZ00433        173 LVDD-RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIY-AGMVFNGATFTSVADFDTTVPRVILGGTAKN  250 (412)
T ss_pred             Hhcc-CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccc-cccccCCCCccchhhccCCCceEEEccchhh
Confidence            8877 89999999999987  23   5788899999999999999984 455543321111   11  123778999997


Q ss_pred             c--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-
Q 009673          316 L--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-  392 (529)
Q Consensus       316 l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-  392 (529)
                      +  +|.|.||+++.++.....++.+.+....... .+.+...+. +++.++.......+++..+++.++++.+.+.|++ 
T Consensus       251 ~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~q~-a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~  328 (412)
T PTZ00433        251 LVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGMLV-CGPCSVVQA-ALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGEC  328 (412)
T ss_pred             cCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhcc-CCCChHHHH-HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            5  8899999997321000014555544322211 223233232 2333443211122466777888889999999987 


Q ss_pred             cCcEEecCCCCCceEEEccCCC---CC-cHHHHHHh-HhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673          393 LGYKLVSGGSDNHLVLVDLRPM---GI-DGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV  467 (529)
Q Consensus       393 ~G~~v~~~gt~~~~~~v~~~~~---~i-~~~~~~~~-L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~  467 (529)
                      .|+.+..+ ..+.++|+.+...   ++ +..++.+. ++++||.+.    ||.... .++++||++.      ..+++++
T Consensus       329 ~~~~~~~p-~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~----pg~~f~-~~~~iRis~~------~~~e~l~  396 (412)
T PTZ00433        329 IGLSPTMP-RGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVL----PGEIFH-MPGFTRLTIS------RPVEVLR  396 (412)
T ss_pred             CCCcccCC-CeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEe----CccccC-CCCeEEEEec------CCHHHHH
Confidence            47765543 2345667766421   12 34455444 467899994    444321 2579999863      2378888


Q ss_pred             HHHHHHHHHHHH
Q 009673          468 AIADFIHEGVEI  479 (529)
Q Consensus       468 ~la~~i~~~~~~  479 (529)
                      +..+.|.+++..
T Consensus       397 ~al~~l~~~~~~  408 (412)
T PTZ00433        397 EAVERIKAFCER  408 (412)
T ss_pred             HHHHHHHHHHHH
Confidence            888888887764

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=99.91  E-value=1.5e-22  Score=209.99  Aligned_cols=314  Identities=18%  Similarity=0.165  Sum_probs=214.0

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.++|..++|+  +++.+++++...+.. .. .||.       ....+++    +.++++++++++    +|.+++|+ +
T Consensus        30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~~-~~p~-------~g~~~lr----~~ia~~~~~~~~----~i~~t~G~~~   92 (359)
T PRK03158         30 KIVKLASNENPYGPSPKVKEAIAAHLDE-LA-LYPD-------GYAPELR----TKVAKHLGVDEE----QLLFGAGLDE   92 (359)
T ss_pred             ceEEecCCCCCCCCCHHHHHHHHHHHHH-hh-cCCC-------CcHHHHH----HHHHHHhCCCHH----HEEECCCHHH
Confidence            55788777764  578899998766532 11 1221       1123343    667778888764    56678888 8


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      ++..++.+++++||+|++++|.|++..        ......|.  +++.++++  ++.+|++++++.+++ +++++++++
T Consensus        93 ~l~~~~~~~~~~gd~v~~~~p~y~~~~--------~~~~~~g~--~~~~~~~~--~~~~d~~~l~~~~~~-~~~~v~i~~  159 (359)
T PRK03158         93 VIQMISRALLNPGTNTVMAEPTFSQYR--------HNAIIEGA--EVREVPLK--DGGHDLEAMLKAIDE-QTKIVWICN  159 (359)
T ss_pred             HHHHHHHHHhCCCCEEEEcCCCHHHHH--------HHHHHcCC--eEEEEecC--CCCcCHHHHHHhcCC-CCCEEEEeC
Confidence            888888899999999999999775432        12233454  55566665  467999999998877 899999888


Q ss_pred             CCCCC--CCCHHHHHHHHHH--hCCEEEEecccccccccccccCCCCC-----cccEEEecccccc--cCCCCeEEEeeC
Q 009673          260 SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-----YCDVVTTTTHKSL--RGPRGGMIFFKK  328 (529)
Q Consensus       260 s~~p~--~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~~-----~aDiv~~S~hK~l--~GprgG~i~~~~  328 (529)
                      |+||+  ..+.+++.++++.  +|+++|+|++|. .+...+..+.++.     ...+++.|++|++  +|.|.||+++++
T Consensus       160 p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~  238 (359)
T PRK03158        160 PNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYY-EYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE  238 (359)
T ss_pred             CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchH-hhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH
Confidence            99997  6788999998887  599999999954 3333222222111     1347889999987  689999999987


Q ss_pred             CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673          329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV  407 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~  407 (529)
                            ++.+.+.....+  .+.+...+.+ +..+++   ... .++..+.+.++++.+.+.|.+.|+.+..++  ..++
T Consensus       239 ------~~~~~~~~~~~~--~~~~~~~q~~-~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--g~~i  304 (359)
T PRK03158        239 ------ELIEKLNIARPP--FNTTRIAQYA-AIAALE---DQAFLKECVEKNAEGLEQYYAFCKEYGLFYYPSQ--TNFI  304 (359)
T ss_pred             ------HHHHHHHHhcCC--CCCCHHHHHH-HHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCCCeeCCCc--CcEE
Confidence                  677776654332  2333333333 233443   223 355666677788888888888888776532  4567


Q ss_pred             EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      |+++.   .+..++.+.|.++||.+.    ||+... .+++|||++.       +.+|++++.+.|+++
T Consensus       305 ~~~~~---~~~~~~~~~l~~~gv~v~----~g~~f~-~~~~iRi~~~-------~~~~~~~l~~al~~~  358 (359)
T PRK03158        305 FVDTG---RDANELFEALLKKGYIVR----SGAALG-FPTGVRITIG-------LKEQNDKIIELLKEL  358 (359)
T ss_pred             EEECC---CCHHHHHHHHHHCCeEEe----eCCCCC-CCCeEEEecC-------CHHHHHHHHHHHHHh
Confidence            77663   356677777778999995    443321 2578999863       479999999999875

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.91  E-value=5.5e-22  Score=209.32  Aligned_cols=328  Identities=19%  Similarity=0.215  Sum_probs=212.6

Q ss_pred             EecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCC-CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHH
Q 009673          107 LIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYG-GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN  181 (529)
Q Consensus       107 L~asen~~----~~~V~eal~~~l~~~y~~G~p~~r~~~-g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~  181 (529)
                      ...|.||+    +|.|++++...+. +|..+..++|.+. ..+...++|    +.+++++|.+.     .+.++||++||
T Consensus        50 ~~~s~dylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~g~~~~~~~l~----~~la~~~g~~~-----~~~~~sG~~an  119 (407)
T PRK09064         50 VWCSNDYLGMGQHPKVIEAMIEALD-RCGAGAGGTRNISGTNHYHVELE----RELADLHGKEA-----ALVFTSGYVSN  119 (407)
T ss_pred             EEECCCCcCCCCCHHHHHHHHHHHH-HcCCCCCCcCcCccCHHHHHHHH----HHHHHHhCCCc-----EEEECcHHHHH
Confidence            34566653    7899999987764 4555555555443 344555665    67788888643     45679999999


Q ss_pred             HHHHHhhcC--CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEEE
Q 009673          182 FEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLII  256 (529)
Q Consensus       182 ~~~l~all~--pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~---~~pklIi  256 (529)
                      ..++..+..  +++.|+.....|.+.+.        .+...+.  +...++      ..|++++++.++.   .++++|+
T Consensus       120 ~~ai~~l~~~~~~~~i~~~~~~h~s~~~--------~~~~~~~--~~~~~~------~~d~~~le~~l~~~~~~~~~~v~  183 (407)
T PRK09064        120 DATLSTLAKLIPDCVIFSDELNHASMIE--------GIRRSRC--EKHIFR------HNDVAHLEELLAAADPDRPKLIA  183 (407)
T ss_pred             HHHHHHHhCCCCCCEEEEeCcchHHHHH--------HHHHcCC--cEEEEC------CCCHHHHHHHHHhccCCCCeEEE
Confidence            988887754  78777766554433221        1222333  222332      2478888887763   2678888


Q ss_pred             EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccc-c--cc-CCCC-CcccEEEecccccccCCCCeEEEeeCC
Q 009673          257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--VV-ADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKD  329 (529)
Q Consensus       257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~--~~-~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~  329 (529)
                      ++++.+++  ..|+++|.++|+++|++|++|++|..|.... +  .. ...+ ...|++++|++|++ |+.||++++++ 
T Consensus       184 ~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~-g~~GG~~~~~~-  261 (407)
T PRK09064        184 FESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAF-GVMGGYIAGSA-  261 (407)
T ss_pred             EeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhh-hccCceEecCH-
Confidence            88666553  6799999999999999999999998775421 1  10 0111 24589999999998 56789999887 


Q ss_pred             CcchhHHHhhhcccccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEE
Q 009673          330 PVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL  408 (529)
Q Consensus       330 ~~~~~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~  408 (529)
                           ++.+.+.....+.. ..+.+....++...+++.+...  ....+++.++++++.+.|.+.|++++.+  .++++.
T Consensus       262 -----~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~iv~  332 (407)
T PRK09064        262 -----ALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKES--NEERERHQERAAKLKAALDAAGIPVMPN--ESHIVP  332 (407)
T ss_pred             -----HHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCCCC--CCCEEE
Confidence                 66665543222221 2222333334444567765432  3446778899999999999989887653  245555


Q ss_pred             EccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          409 VDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       409 v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +.+.. ..+..++.+.| ++.||.+.....|..  +.+.+.+||+.+..    ++++|++++++.|+++++
T Consensus       333 i~~~~-~~~~~~l~~~L~~~~gi~v~~~~~p~~--~~~~~~lRis~~~~----~t~edi~~l~~~l~~~~~  396 (407)
T PRK09064        333 VMVGD-PEKCKKASDMLLEEHGIYVQPINYPTV--PRGTERLRITPTPF----HTDEMIDHLVEALVEVWA  396 (407)
T ss_pred             EEeCC-HHHHHHHHHHHHHhCCEEEeeECCCCC--CCCCceEEEEeCCC----CCHHHHHHHHHHHHHHHH
Confidence            54431 12345566665 567999976433321  22346799997654    458999999999998875

>PLN02721 threonine aldolase

Probab=99.91  E-value=5.1e-22  Score=205.22  Aligned_cols=323  Identities=18%  Similarity=0.167  Sum_probs=204.2

Q ss_pred             eeEecCCC-CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673          105 LELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE  183 (529)
Q Consensus       105 i~L~asen-~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~  183 (529)
                      ++|..+++ ++++.+++++......     . ...||.  +..+++|    +.+++++|.+.     .+.+++|++++..
T Consensus         8 ~~~~~~~~~~~~~~~~~a~~~~~~~-----~-~~~~~~--~~~~~l~----~~la~~~~~~~-----~~~~~~Gs~a~~~   70 (353)
T PLN02721          8 VDLRSDTVTKPTDAMRAAMANAEVD-----D-DVLGYD--PTALRLE----EEMAKIFGKEA-----ALFVPSGTMGNLI   70 (353)
T ss_pred             hhhhcccccCCCHHHHHHHHhccCC-----C-cccCCC--HHHHHHH----HHHHHHhCCce-----eEEecCccHHHHH
Confidence            55655554 4678899998642100     1 112222  3355666    66788899874     2445789988888


Q ss_pred             HHHhhcC-CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh------cCCcEEE
Q 009673          184 VYTAILK-PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL------FRPKLII  256 (529)
Q Consensus       184 ~l~all~-pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~------~~pklIi  256 (529)
                      ++.++++ |||+|++.++.|.+.+..+.     .....|.  +++.++.+ +++.+|+|++++.+++      .++++|+
T Consensus        71 ~l~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v~  142 (353)
T PLN02721         71 SVLVHCDVRGSEVILGDNSHIHLYENGG-----ISTLGGV--HPRTVKNN-EDGTMDLDAIEAAIRPKGDDHFPTTRLIC  142 (353)
T ss_pred             HHHHHccCCCCeEEEcCccceehhcccc-----hhhhcCc--eeEecCCC-cCCCcCHHHHHHHHHhccCCCCCcceEEE
Confidence            8888887 99999999987632221000     1223343  66666665 4578999999999973      2788888


Q ss_pred             EcC-CCCCC--CCC---HHHHHHHHHHhCCEEEEeccccccccc-ccccCCCC-CcccEEEecccccccCCCCeEEEeeC
Q 009673          257 AGA-SAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVA-ASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKK  328 (529)
Q Consensus       257 ~~~-s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~-~~~~~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~  328 (529)
                      ++. +++|+  ..+   +++|.++|+++|+++++|++|..+... .+..+..+ .++|.++.|+||++++|.||+++.++
T Consensus       143 l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~  222 (353)
T PLN02721        143 LENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGSK  222 (353)
T ss_pred             EeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecCH
Confidence            864 56654  344   789999999999999999997654321 12111111 26788899999999887766666666


Q ss_pred             CCcchhHHHhhhcccccCCCCCCChH-HHHHHHH-HHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEE-ecCCCCC
Q 009673          329 DPVLGVELESAINNAVFPGLQGGPHN-HTIGGLA-VCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKL-VSGGSDN  404 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~~g~p~~-~~iaala-~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v-~~~gt~~  404 (529)
                            ++.+.+...... ..+++.. ...++.+ .+++.     +.+..++..++++.+.+.|++. |+.+ +.+ ...
T Consensus       223 ------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~  289 (353)
T PLN02721        223 ------SFIRKAKRLRKT-LGGGMRQVGVLAAAALVALQE-----NVPKLEDDHKKAKLLAEGLNQIKGLRVNVAA-VET  289 (353)
T ss_pred             ------HHHHhHHHHHHh-cCCCeehhHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhCCCcEEecCC-ccc
Confidence                  565554332111 1112111 1111111 12322     2223455567788999999885 7765 332 234


Q ss_pred             ceEEEccCC-CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          405 HLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       405 ~~~~v~~~~-~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +++++++.. .+.+...+.+.|.++||.+..    +     .+.+||++++..    ++++|+++++++|++++.
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~----~-----~~~~lR~~~~~~----~~~~~i~~~~~~l~~~~~  351 (353)
T PLN02721        290 NIVYFDITDGSRITAEKLCKSLEEHGVLLMP----G-----NSSRIRVVTHHQ----ISDSDVQYTLSCFQQAAL  351 (353)
T ss_pred             eEEEEEccCCccccHHHHHHHHHhCCcEEec----C-----CCceEEEEecCc----CCHHHHHHHHHHHHHHhh
Confidence            566666643 114567888889999999953    3     256899987533    468999999999988653

>PLN02231 alanine transaminase

Probab=99.91  E-value=6.6e-22  Score=213.94  Aligned_cols=343  Identities=15%  Similarity=0.126  Sum_probs=214.6

Q ss_pred             cceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHH
Q 009673          103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PAN  181 (529)
Q Consensus       103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~  181 (529)
                      +.|++.+++...|..+++.....+.+.....   .-.|+...-..++.+.+.+++.+..|.+.+.  .+|.+|+|+ +|+
T Consensus       130 ~~i~~~~~~~~fp~~~i~~a~~~l~~~~~~~---~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~p--e~I~iT~Ga~~ai  204 (534)
T PLN02231        130 SLLDKSETHGLFSADAIERAWQILDQIPGRA---TGAYSHSQGIKGLRDAIAAGIEARDGFPADP--NDIFLTDGASPAV  204 (534)
T ss_pred             ccCCCCCccccCCHHHHHHHHHHHHhcCCcc---ccCcCCCCCcHHHHHHHHHHHHhccCCCCCc--ccEEEeCCHHHHH
Confidence            4466655555566777777766664322100   0013323334566666678888777765332  367789998 899


Q ss_pred             HHHHHhhc-CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhc-----CCcE
Q 009673          182 FEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF-----RPKL  254 (529)
Q Consensus       182 ~~~l~all-~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~-----~pkl  254 (529)
                      ..++.+++ .|||.|++++|.|..+.        ..+...|.  ++++++++++ +|.+|+++|++.+++.     ++|+
T Consensus       205 ~~~~~~l~~~~gd~Vli~~P~Y~~y~--------~~~~~~g~--~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~  274 (534)
T PLN02231        205 HMMMQLLIRSEKDGILCPIPQYPLYS--------ASIALHGG--TLVPYYLDEATGWGLEISELKKQLEDARSKGITVRA  274 (534)
T ss_pred             HHHHHHhccCCCCEEEEeCCCChhHH--------HHHHHcCC--EEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEE
Confidence            99999998 48999999999876542        13344554  6777778754 4799999999988652     6888


Q ss_pred             EEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccc-ccCCCCC---------ccc---EEEecccccc
Q 009673          255 IIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAAS-VVADPFK---------YCD---VVTTTTHKSL  316 (529)
Q Consensus       255 Ii~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~-~~~~~~~---------~aD---iv~~S~hK~l  316 (529)
                      |++++|+||+  ..   .+++|.++|+++|++||+|++ |..+++.+ ....++.         .-|   +++.|++|.+
T Consensus       275 ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEv-Y~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~  353 (534)
T PLN02231        275 LVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEV-YQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGY  353 (534)
T ss_pred             EEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcc-chhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCccc
Confidence            8888899997  33   577888999999999999998 45555532 1111110         012   5668999964


Q ss_pred             ---cCCCCeEEEee--CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh--cCchHH-------HHHHHHHHH
Q 009673          317 ---RGPRGGMIFFK--KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA--QSPEFK-------VYQNKVVSN  382 (529)
Q Consensus       317 ---~GprgG~i~~~--~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~--~~~~~~-------~~~~~i~~~  382 (529)
                         +|+|+||+++.  ++     ++.+.+.+..... .+++...++++ ..+++.-  ....|+       +..+.+.++
T Consensus       354 ~g~pGlRiGy~~~~~~~~-----~l~~~l~k~~~~~-~~s~~~~Q~~~-~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r  426 (534)
T PLN02231        354 YGECGKRGGYMEVTGFTS-----DVREQIYKVASVN-LCSNISGQILA-SLVMSPPKPGDESYESYMAEKDGILSSLARR  426 (534)
T ss_pred             ccCCccceEEEEEecCCH-----HHHHHHHHHHhhh-cCCChHHHHHH-HHHhCCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence               69999999863  22     5666654432211 22323333332 2233210  011232       235678888


Q ss_pred             HHHHHHHHHhc-CcEEecCCCCCceEEEccCC--CCC---------cHHH-HHHhHhcCCeEEcCCCCCCCCC-C-CCCC
Q 009673          383 CRALASRLVEL-GYKLVSGGSDNHLVLVDLRP--MGI---------DGAR-VEKILDMASITLNKNSVPGDKS-A-LVPG  447 (529)
Q Consensus       383 a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~--~~i---------~~~~-~~~~L~~~GI~v~~~~~Pg~~~-~-~~~~  447 (529)
                      ++.+.+.|++. |+.+..+ ..++++|+++..  ..+         +... +..+|++.||.+    +||... . .+..
T Consensus       427 ~~~l~~~L~~~~gi~~~~p-~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~v----vPGs~Fg~~~g~~  501 (534)
T PLN02231        427 AKTLEDALNSLEGVTCNKA-EGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVV----VPGSGFGQVPGTW  501 (534)
T ss_pred             HHHHHHHHhcCCCceecCC-CeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEE----eCCcccCCCCCCC
Confidence            99999999885 8887654 235666645531  111         1222 355678899999    566542 1 1234


Q ss_pred             eEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          448 GIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       448 ~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      ++|+++.      .+++++++.++.|.+.++.
T Consensus       502 ~~Rit~~------~~~e~l~eal~RL~~~~~~  527 (534)
T PLN02231        502 HFRCTIL------PQEDKIPAIVSRLTEFHKS  527 (534)
T ss_pred             eEEEEeC------CCHHHHHHHHHHHHHHHHH
Confidence            6999862      3478888888888776653

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=99.91  E-value=2.3e-21  Score=204.25  Aligned_cols=343  Identities=18%  Similarity=0.131  Sum_probs=211.2

Q ss_pred             hcceeEecCCC------CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecC
Q 009673          102 FKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL  175 (529)
Q Consensus       102 ~~~i~L~asen------~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~  175 (529)
                      .+.++|..++.      ++++.+++++...+...+..+|+.   ..|   ..++++.+.+++...++.+.+.  -+|.++
T Consensus        31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~---~~g---~~~lr~~ia~~l~~~~~~~~~~--~~ii~t  102 (403)
T TIGR01265        31 KPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAP---SVG---ALAAREAVAEYLSSDLPGKLTA--DDVVLT  102 (403)
T ss_pred             CCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCC---CCC---CHHHHHHHHHHHHhhcCCCCCH--HHEEEe
Confidence            46788876653      467899999987775443223322   112   2344433334433333332111  245567


Q ss_pred             ChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCc
Q 009673          176 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPK  253 (529)
Q Consensus       176 sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pk  253 (529)
                      +|+ +|+..++.+++++||+|++++|.|....        ......|.  +++.++++++ ++.+|++++++.+.+ +++
T Consensus       103 ~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~--------~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~  171 (403)
T TIGR01265       103 SGCSQAIEICIEALANPGANILVPRPGFPLYD--------TRAAFSGL--EVRLYDLLPEKDWEIDLDGLEALADE-KTV  171 (403)
T ss_pred             cChHHHHHHHHHHhCCCCCEEEEeCCCchhHH--------HHHHHcCC--EEEEecCCcccCCccCHHHHHHHhCc-Ccc
Confidence            775 9999999999999999999998765321        12233454  5666666433 578999999998876 789


Q ss_pred             EEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-cc-cEEEecccccc--cCCCC
Q 009673          254 LIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YC-DVVTTTTHKSL--RGPRG  321 (529)
Q Consensus       254 lIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~-~a-Div~~S~hK~l--~Gprg  321 (529)
                      ++++++|+||+  ..   ++++|.++|+++|+++|+|++ |..+.+.+....++   . .. -++++|++|++  +|.|.
T Consensus       172 ~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~-y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRi  250 (403)
T TIGR01265       172 AIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEI-YGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRL  250 (403)
T ss_pred             EEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcc-ccccccCCCCccchhhhccCCcEEEEeecccccCCCcceE
Confidence            99998888887  33   488999999999999999998 44554433111121   1 11 26779999984  88999


Q ss_pred             eEEEeeCCC-cchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEec
Q 009673          322 GMIFFKKDP-VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS  399 (529)
Q Consensus       322 G~i~~~~~~-~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~  399 (529)
                      ||+++++.. ....++.+.+...... ..+ ++.....++..++.......+++..+++.++++.+.+.|+.. |+.+..
T Consensus       251 G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~  328 (403)
T TIGR01265       251 GWIIIHDPHGIFRDTVLQGLKNLLQR-ILG-PATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPK  328 (403)
T ss_pred             EEEEEeCchhhhHHHHHHHHHHHhhh-hcC-CChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecC
Confidence            999985320 0000133333222111 112 223333344445543211234667788888999999999875 776543


Q ss_pred             CCCCCceEEEccCCCC----CcHHHHHH-hHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673          400 GGSDNHLVLVDLRPMG----IDGARVEK-ILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH  474 (529)
Q Consensus       400 ~gt~~~~~~v~~~~~~----i~~~~~~~-~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~  474 (529)
                      + ..+.++|+++....    .+..++.+ +++++||.+    .||.... .+++|||++.      ..++.+++..+.|.
T Consensus       329 p-~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v----~pg~~f~-~~~~iRis~~------~~~~~l~~~l~~l~  396 (403)
T TIGR01265       329 P-EGAMYLMVKLELELFPEIKDDVDFCEKLVREESVIC----LPGSAFG-LPNWVRITIT------VPESMLEEACSRIK  396 (403)
T ss_pred             C-CceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEE----eCccccC-CCCeEEEEec------CCHHHHHHHHHHHH
Confidence            3 23567788775321    24555544 468899999    4554321 3678999964      23667777777776


Q ss_pred             HHHH
Q 009673          475 EGVE  478 (529)
Q Consensus       475 ~~~~  478 (529)
                      ++++
T Consensus       397 ~~~~  400 (403)
T TIGR01265       397 EFCE  400 (403)
T ss_pred             HHHH
Confidence            6654

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>PRK09265 aminotransferase AlaT; Validated

Probab=99.91  E-value=1.4e-21  Score=206.10  Aligned_cols=337  Identities=14%  Similarity=0.062  Sum_probs=207.4

Q ss_pred             cceeEecCCC-----CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc--CCCCCCCceeeecC
Q 009673          103 KSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF--NLDENKWGVNVQPL  175 (529)
Q Consensus       103 ~~i~L~asen-----~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~--g~~~~~~~~~V~~~  175 (529)
                      +.++|..++.     .+++.+.+++...+...  .+|+..   .|   ..++.+...+++....  +++++    +|.++
T Consensus        34 ~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~--~~Y~~~---~G---~~~lr~~ia~~~~~~~~~~~~~~----~i~~t  101 (404)
T PRK09265         34 KILKLNIGNPAPFGFEAPDEILRDVIRNLPTA--QGYSDS---KG---LFSARKAIMQYYQQKGIPDVDVD----DIYIG  101 (404)
T ss_pred             CeEEecCCCCCcCCCCCCHHHHHHHHHHhhcC--CCCCCC---CC---cHHHHHHHHHHHhccCCCCCCcc----cEEEe
Confidence            5688876432     26788888887655422  234331   12   2344433334443322  45554    56678


Q ss_pred             ChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCc
Q 009673          176 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPK  253 (529)
Q Consensus       176 sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pk  253 (529)
                      +|+ +++..++.++++|||+|++++|.|..+..        .+...|.  +++.++++.+ ++.+|++++++.+.+ +++
T Consensus       102 ~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~v~~~~~~~~~~~~d~~~l~~~~~~-~~~  170 (404)
T PRK09265        102 NGVSELIVMAMQALLNNGDEVLVPAPDYPLWTA--------AVSLSGG--KPVHYLCDEEAGWFPDLDDIRSKITP-RTK  170 (404)
T ss_pred             CChHHHHHHHHHHhCCCCCEEEEeCCCCcChHH--------HHHHcCC--EEEEEecccccCCCCCHHHHHHhccc-cce
Confidence            888 78888999999999999999998764321        2223443  5555555533 567999999999876 799


Q ss_pred             EEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-ccc-EEEecccccc--cCCCC
Q 009673          254 LIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCD-VVTTTTHKSL--RGPRG  321 (529)
Q Consensus       254 lIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~-~aD-iv~~S~hK~l--~Gprg  321 (529)
                      +|++++|+||+  ..+   +++|.++|+++|+++|+|+++ ..+.+.+....++   . ... +++.|++|++  +|.|.
T Consensus       171 ~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRi  249 (404)
T PRK09265        171 AIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIY-DKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRV  249 (404)
T ss_pred             EEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhh-hhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccce
Confidence            99988899887  566   888999999999999999984 3544333211111   1 112 5679999986  78999


Q ss_pred             eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH---HHHHHHHHHHHHHHHHhc-CcEE
Q 009673          322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY---QNKVVSNCRALASRLVEL-GYKL  397 (529)
Q Consensus       322 G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~---~~~i~~~a~~l~~~L~~~-G~~v  397 (529)
                      ||++.+.......++.+.+..... ...+.+...+. ++..+|..  ...++.+   .+++.++++.+.+.|++. |+.+
T Consensus       250 G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~-~~~~~l~~--~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~  325 (404)
T PRK09265        250 GWMVLSGPKKHAKGYIEGLDMLAS-MRLCANVPAQH-AIQTALGG--YQSINELILPGGRLYEQRDRAWELLNAIPGVSC  325 (404)
T ss_pred             EEEEEeCchHHHHHHHHHHHHHhc-cccCCCcHHHH-HHHHHhcC--chhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence            999974321000013333321111 11122222233 33334431  1122222   246677788888888774 7765


Q ss_pred             ecCCCCCceEEEccCCCC---C-cHHHHHHhHhcCCeEEcCCCCCCCCC-CCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673          398 VSGGSDNHLVLVDLRPMG---I-DGARVEKILDMASITLNKNSVPGDKS-ALVPGGIRIGSPAMTTRGFSEKEFVAIADF  472 (529)
Q Consensus       398 ~~~gt~~~~~~v~~~~~~---i-~~~~~~~~L~~~GI~v~~~~~Pg~~~-~~~~~~iRig~~~~tt~g~~~~d~~~la~~  472 (529)
                      ..+ ..+.++|+++....   . +.+.+.+.|.++||.+.    ||... ...++++||++.      .+++++++..+.
T Consensus       326 ~~p-~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~----pg~~F~~~~~~~~Ri~~~------~~~e~l~~~l~r  394 (404)
T PRK09265        326 VKP-KGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLV----QGTGFNWPEPDHFRIVTL------PRVDDLEEAIGR  394 (404)
T ss_pred             cCC-CcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEE----CchhhCCCCCCeEEEEeC------CCHHHHHHHHHH
Confidence            544 23566777775321   1 23457888999999994    44431 223578999972      347899999999


Q ss_pred             HHHHHH
Q 009673          473 IHEGVE  478 (529)
Q Consensus       473 i~~~~~  478 (529)
                      |.++++
T Consensus       395 l~~~l~  400 (404)
T PRK09265        395 IGRFLS  400 (404)
T ss_pred             HHHHHH
Confidence            988775

>PRK09275 aspartate aminotransferase; Provisional

Probab=99.91  E-value=1.8e-22  Score=215.84  Aligned_cols=344  Identities=15%  Similarity=0.158  Sum_probs=209.5

Q ss_pred             cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCC-ceeeecCChH-
Q 009673          103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKW-GVNVQPLSGS-  178 (529)
Q Consensus       103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~-~~~V~~~sGs-  178 (529)
                      +.|+|..++.  .+|+.|.++......+.    ||..   .|.  ....|+++...+.+.++...... ..+|.+|+|+ 
T Consensus       101 ~~i~l~~g~p~~~~~~~v~e~~~~~~~~~----Y~~~---~g~--~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~  171 (527)
T PRK09275        101 DAVSYVRDQLGFDADEFVYELVDGIIGDN----YPVP---DRM--LKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGT  171 (527)
T ss_pred             HHHhhcCCCCCCCCCHHHHHHHHHHhcCC----CCCC---CCC--HHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHH
Confidence            4577777663  35677777554443222    3321   111  23334444445444433321100 0267778887 


Q ss_pred             HHHHHHHHh-----hcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCC
Q 009673          179 PANFEVYTA-----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRP  252 (529)
Q Consensus       179 ~A~~~~l~a-----ll~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~p  252 (529)
                      +|+..++.+     +++|||+|++++|.|..+..        .+.+.|...++++++.+++ +|.+|.++|++++++ ++
T Consensus       172 ~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~--------~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~-~t  242 (527)
T PRK09275        172 AAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLE--------IPELPRYDLEVVHINADEENEWQYPDSELEKLRDP-SI  242 (527)
T ss_pred             HHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHH--------HHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC-CC
Confidence            888888876     68999999999997754421        2334454457777776544 489999999998877 89


Q ss_pred             cEEEEcCCCCCC--CCC---HHHHHHHHHH--hCCEEEEecccccccccccccCCCCC---cccEEEecccccc--cCCC
Q 009673          253 KLIIAGASAYPR--DFD---YPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSL--RGPR  320 (529)
Q Consensus       253 klIi~~~s~~p~--~~d---~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~~---~aDiv~~S~hK~l--~Gpr  320 (529)
                      |+|++++|+||+  ..+   +++|.++|++  ++++||+|+++. .+.. . ..+.+.   .--|++.|++|++  +|||
T Consensus       243 kai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~-~f~~-~-~~s~~~~~~~~~I~v~SfSK~f~mtG~R  319 (527)
T PRK09275        243 KALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYG-TFVD-D-FRSLFAVLPYNTILVYSFSKYFGATGWR  319 (527)
T ss_pred             CEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCCh-hhcc-c-ccCHHHhCCCCEEEEeehhhhccCcHhH
Confidence            999999999997  444   7788888965  499999999843 3432 1 111111   2348889999986  8999


Q ss_pred             CeEEEeeCCCcchhHHHhhh--------------------------------cccccCCCCCCChHHHHH-H---HHHHH
Q 009673          321 GGMIFFKKDPVLGVELESAI--------------------------------NNAVFPGLQGGPHNHTIG-G---LAVCL  364 (529)
Q Consensus       321 gG~i~~~~~~~~~~~l~~~i--------------------------------~~~~~p~~~g~p~~~~ia-a---la~al  364 (529)
                      .||++++++.. ..++.+.+                                .........|.+...+.+ +   +..++
T Consensus       320 lG~i~~~~~~v-~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all  398 (527)
T PRK09275        320 LGVIALHEDNV-FDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALL  398 (527)
T ss_pred             HhhhhcCchhH-HHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence            99999987410 00011111                                111111112333344443 3   22223


Q ss_pred             HHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec-CCCCCceEEEccCCCC---------------CcH-HHHHHhHhc
Q 009673          365 KHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS-GGSDNHLVLVDLRPMG---------------IDG-ARVEKILDM  427 (529)
Q Consensus       365 ~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~-~gt~~~~~~v~~~~~~---------------i~~-~~~~~~L~~  427 (529)
                      +. .....++.++.+.++++.+.+.|   |+.+.. +....++.++|+...+               .+. +.+.+++++
T Consensus       399 ~~-~~~~~~~~~~~~~~Rr~~l~~~L---g~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e  474 (527)
T PRK09275        399 DE-EDAYKKAMKDIIRRRYKALYEGL---GLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEE  474 (527)
T ss_pred             hC-chHHHHHHHHHHHHHHHHHHHHc---CCCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhc
Confidence            32 11223566777788888787776   443321 2223567788875311               133 345677789


Q ss_pred             CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHH
Q 009673          428 ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITL  481 (529)
Q Consensus       428 ~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~  481 (529)
                      +||.+    +||......++++||++..     .+++++.++.+.|.+++....
T Consensus       475 ~gV~v----~PG~~Fg~~~~~vRis~a~-----~~~~~~~~~~~rl~~~l~~y~  519 (527)
T PRK09275        475 TGVVL----LPGGGFGGPEWSVRVSLAN-----LNEEDYAKIGKAIRKLLDEYY  519 (527)
T ss_pred             CCEEE----eCchhhCCCCCeEEEEEec-----CCHHHHHHHHHHHHHHHHHHH
Confidence            99999    6765521135789999743     457999999999999887654

>PLN02822 serine palmitoyltransferase

Probab=99.91  E-value=9.1e-22  Score=210.94  Aligned_cols=337  Identities=15%  Similarity=0.170  Sum_probs=219.0

Q ss_pred             cceeEecCCC---CCcHHHHHHHhhhhhccCCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673          103 KSLELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRY-YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS  178 (529)
Q Consensus       103 ~~i~L~asen---~~~~~V~eal~~~l~~~y~~G~p~~r~-~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs  178 (529)
                      +.|++..+..   ..++++++++...+ .+|..|+.+.|. |+..+...++|    +.++++++.+.     .|..++|.
T Consensus       110 ~~id~~s~~~lgl~~~~~i~ea~~~al-~~~G~g~~g~r~~yg~~~~~~~Le----e~La~~~~~~~-----~i~~s~G~  179 (481)
T PLN02822        110 DVVNFASANYLGLIGNEKIKESCTSAL-EKYGVGSCGPRGFYGTIDVHLDCE----TKIAKFLGTPD-----SILYSYGL  179 (481)
T ss_pred             eEEEeECCCcCCCCCCHHHHHHHHHHH-HHhCCCCcccCccccCHHHHHHHH----HHHHHHhCCCC-----EEEECCHH
Confidence            4577654321   25899999998877 456667777765 45455555555    77889999764     35567887


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh--------c
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL--------F  250 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~--------~  250 (529)
                      .++.+++.+++++||.|++....|.+..        ..+.+.+.  +++.++.+      |.++++..+++        .
T Consensus       180 ~a~~sai~a~~~~gd~Ii~d~~~H~s~~--------~~~~ls~~--~~~~~~~n------d~~~l~~~l~~~~~~~~~~~  243 (481)
T PLN02822        180 STIFSVIPAFCKKGDIIVADEGVHWGIQ--------NGLYLSRS--TIVYFKHN------DMESLRNTLEKLTAENKRKK  243 (481)
T ss_pred             HHHHHHHHHhCCCCCEEEEeCCccHHHH--------HHHHHcCC--eEEEECCC------CHHHHHHHHHHHhhhhcccC
Confidence            7889999999999999997655443221        12334454  56666543      33444433321        1


Q ss_pred             CC-cEEEEcCC--CCCCCCCHHHHHHHHHHhCCEEEEecccccccccc-c--cc-CCCC--CcccEEEecccccccCCCC
Q 009673          251 RP-KLIIAGAS--AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--VV-ADPF--KYCDVVTTTTHKSLRGPRG  321 (529)
Q Consensus       251 ~p-klIi~~~s--~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~--~~-~~~~--~~aDiv~~S~hK~l~Gprg  321 (529)
                      ++ ++|+++..  +.+...|+++|+++|++||+++|+|++|..|.... |  .. ...+  ...|++++|++|++ |..|
T Consensus       244 ~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKal-g~~G  322 (481)
T PLN02822        244 KLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHAL-ATEG  322 (481)
T ss_pred             CCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhh-hhCC
Confidence            34 57777643  34448899999999999999999999998776532 1  10 0111  24689999999998 5677


Q ss_pred             eEEEeeCCCcchhHHHhhhcccccCCCCCC--ChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEe
Q 009673          322 GMIFFKKDPVLGVELESAINNAVFPGLQGG--PHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLV  398 (529)
Q Consensus       322 G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~--p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~  398 (529)
                      ||+++++      ++.+.+......+..++  |...+.+++ .+|+...  ...+..+++.++++.+.+.|++. |+.+.
T Consensus       323 G~i~g~~------~ii~~~~~~~~~~~fsa~lPp~~~~Aa~-~aL~~l~--~~~~~~~~l~~~~~~l~~~L~~~~g~~~~  393 (481)
T PLN02822        323 GFCTGSA------RVVDHQRLSSSGYVFSASLPPYLASAAI-TAIDVLE--DNPSVLAKLKENIALLHKGLSDIPGLSIG  393 (481)
T ss_pred             eEEEcCH------HHHHHHHhcCCceeeccccCHHHHHHHH-HHHHHHH--hCHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence            9999987      67666654333333333  344444444 3676543  23567889999999999999884 88775


Q ss_pred             cCCCCCceEEEccCCC-CC---c---HHHHHHh-HhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673          399 SGGSDNHLVLVDLRPM-GI---D---GARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA  470 (529)
Q Consensus       399 ~~gt~~~~~~v~~~~~-~i---~---~~~~~~~-L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la  470 (529)
                      .+ ..++++++.+... +.   +   ..++.+. |+++||.+.....|.-.....+.++||++.+    +++++|+++++
T Consensus       394 ~~-~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~----~~t~edI~~~~  468 (481)
T PLN02822        394 SN-TLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSA----GHTESDILKAS  468 (481)
T ss_pred             CC-CCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECC----CCCHHHHHHHH
Confidence            43 2456676766431 10   1   1345544 4689999975322321111124579997653    36799999999


Q ss_pred             HHHHHHHHHH
Q 009673          471 DFIHEGVEIT  480 (529)
Q Consensus       471 ~~i~~~~~~~  480 (529)
                      +.|++++...
T Consensus       469 ~~l~~~~~~~  478 (481)
T PLN02822        469 ESLKRVAASV  478 (481)
T ss_pred             HHHHHHHHHH
Confidence            9999887653

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=99.91  E-value=4.1e-22  Score=207.38  Aligned_cols=318  Identities=19%  Similarity=0.171  Sum_probs=215.8

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.++|..++|+  +++.+++++...+.. + ..|+..      . ..+++    +.+++++|++++    +|.+++|+ +
T Consensus        33 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~~------~-~~~lr----~~ia~~~~~~~~----~i~~t~G~~~   95 (367)
T PRK02731         33 DIIKLASNENPLGPSPKAIEAIRAAADE-L-HRYPDG------S-GFELK----AALAEKFGVDPE----RIILGNGSDE   95 (367)
T ss_pred             ceEEecCCCCCCCCCHHHHHHHHHHHHh-h-cCCCCC------c-HHHHH----HHHHHHhCcCHH----HEEEcCCHHH
Confidence            56888877765  578899998876532 2 223321      1 13444    567778898764    56678888 7


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      ++..++.+++++||+|++.+|.|..+.        ......|.  +++.++.  +++.+|++++++.+++ ++++|++++
T Consensus        96 ~l~~~~~~l~~~gd~vl~~~p~y~~~~--------~~~~~~g~--~~~~~~~--~~~~~~~~~l~~~~~~-~~~~v~l~~  162 (367)
T PRK02731         96 ILELLARAYLGPGDEVIYSEHGFAVYP--------IAAQAVGA--KPVEVPA--KDYGHDLDAMLAAVTP-RTRLVFIAN  162 (367)
T ss_pred             HHHHHHHHhcCCCCEEEEecCCHHHHH--------HHHHHcCC--eEEEecc--cCCCCCHHHHHHHhCC-CCcEEEEeC
Confidence            777788889999999999998764321        11233454  5666665  3578999999999976 899999998


Q ss_pred             CCCCC--CCCHHHHHHHHHHh--CCEEEEecccccccccccccCCCC---C-c-ccEEEecccccc--cCCCCeEEEeeC
Q 009673          260 SAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPF---K-Y-CDVVTTTTHKSL--RGPRGGMIFFKK  328 (529)
Q Consensus       260 s~~p~--~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~---~-~-aDiv~~S~hK~l--~GprgG~i~~~~  328 (529)
                      ++||+  ..+.+++.++++.+  |+++++|++|. .+...+....++   + . -.++++|++|++  +|+|.||+++++
T Consensus       163 p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~  241 (367)
T PRK02731        163 PNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYA-EYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP  241 (367)
T ss_pred             CCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHH-HhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH
Confidence            88887  77899999999875  89999999854 333222111111   1 1 237788999985  688899999987


Q ss_pred             CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673          329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV  407 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~  407 (529)
                            ++.+.+.....+.  +.+...+.+ +..+++   ... .++..+.+.++++.+.+.|++.|+.+..+  ...++
T Consensus       242 ------~~~~~l~~~~~~~--~~~~~~~~~-a~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~g~~~  307 (367)
T PRK02731        242 ------EIIDALNRVRQPF--NVNSLALAA-AVAALD---DDAFVEKSRALNAEGMAWLTEFLAELGLEYIPS--VGNFI  307 (367)
T ss_pred             ------HHHHHHHHccCCC--CCCHHHHHH-HHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCccCCC--CceEE
Confidence                  6777665543222  222222222 222332   223 36667777888888999998888876543  35677


Q ss_pred             EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      |+++. .+.+..++.+.|.++||.+.....++     .+++|||++.       +.+|++++.+.|+++++
T Consensus       308 ~i~~~-~~~~~~~~~~~L~~~gI~v~~~~~~~-----~~~~iRis~~-------~~~e~~~l~~aL~~~~~  365 (367)
T PRK02731        308 LVDFD-DGKDAAEAYQALLKRGVIVRPVAGYG-----LPNALRITIG-------TEEENRRFLAALKEFLA  365 (367)
T ss_pred             EEECC-CCCCHHHHHHHHHHCCEEEEeCCCCC-----CCCeEEEecC-------CHHHHHHHHHHHHHHHh
Confidence            87773 34567788888888999995432111     2578999963       36899999999988764

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.91  E-value=7.9e-22  Score=211.68  Aligned_cols=332  Identities=17%  Similarity=0.158  Sum_probs=213.9

Q ss_pred             CCCCCcHHHHHHHhhhh-hccCCCCC-CCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHH--
Q 009673          110 SENFTSRAVMEAVGSCL-TNKYSEGL-PGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY--  185 (529)
Q Consensus       110 sen~~~~~V~eal~~~l-~~~y~~G~-p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l--  185 (529)
                      ....+++.+.+++.+.. ...|+ .| |...    .+-..++....++++++++|++.    +.+..++|+.+....+  
T Consensus        78 ~~~~~~p~i~~~~~~~~~~~~~t-pYq~e~~----sqG~lel~~~~~~~la~l~G~~~----~~l~~~~GA~a~~~~l~~  148 (481)
T PRK04366         78 CTMKYNPKINEKVARLPGFAELH-PLQPEET----VQGALELMYELQEWLKEITGMDA----VTLQPAAGAHGELTGLLM  148 (481)
T ss_pred             cCCCCCHHHHHHHHhCcchhcCC-CCCChhh----hhHHHHHHHHHHHHHHHHhCCCc----eEEEeCcHHHHHHHHHHH
Confidence            34567899999887651 11221 12 1111    11233445567799999999974    4677788875554322  


Q ss_pred             -H-hhcCCCC----EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          186 -T-AILKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       186 -~-all~pGD----~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                       . .++++||    +|+++++.|+.+..        .+...|.  +++.++++ +++.+|+++|++.+++ ++++|++++
T Consensus       149 ~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~--------~~~~~G~--~vv~v~~~-~~~~~D~e~L~~~i~~-~t~~V~v~~  216 (481)
T PRK04366        149 IRAYHEARGDTKRTEVIVPDSAHGTNPA--------SAAMAGF--KVVEIPSN-EDGLVDLEALKAAVGE-DTAALMLTN  216 (481)
T ss_pred             HHHHhhccCcCCCCEEEEcCCccHhHHH--------HHHHcCC--EEEEeecC-CCCCcCHHHHHhhccc-CCeEEEEeC
Confidence             2 3467887    99999988865542        2334554  66666665 4689999999999987 899998887


Q ss_pred             CCCCC-C-CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccccCCC------CeEEEeeCCC
Q 009673          260 SAYPR-D-FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR------GGMIFFKKDP  330 (529)
Q Consensus       260 s~~p~-~-~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~Gpr------gG~i~~~~~~  330 (529)
                      |+..+ . .|+++|+++|+++|+++++|++|..++..  .. .+-+ ++|++++++||||.+|.      +|+++++++ 
T Consensus       217 Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g--~~-~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~-  292 (481)
T PRK04366        217 PNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAILG--KA-RPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEE-  292 (481)
T ss_pred             CCCccccchHHHHHHHHHHHcCCEEEEEecChhhhcc--cC-CccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhh-
Confidence            77433 3 48999999999999999999998766432  11 2223 79999999999986543      368888773 


Q ss_pred             cchhHHHhhhccc-------cc------C-----CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673          331 VLGVELESAINNA-------VF------P-----GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE  392 (529)
Q Consensus       331 ~~~~~l~~~i~~~-------~~------p-----~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~  392 (529)
                           +.+++...       .+      +     .-.++.+...+.+.+..+..+..+++++..++...++++|++.|.+
T Consensus       293 -----~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~  367 (481)
T PRK04366        293 -----LAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKD  367 (481)
T ss_pred             -----hHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence                 33322100       00      0     0001111112222222344444556777788889999999999988


Q ss_pred             cCcEEecCCCCCceEEEcc---CCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHH
Q 009673          393 LGYKLVSGGSDNHLVLVDL---RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI  469 (529)
Q Consensus       393 ~G~~v~~~gt~~~~~~v~~---~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~l  469 (529)
                      . +.+..++...+.++++.   ...+++..++.+.|.+.||.+.....|.    ...+.+|++....+|    ++|++++
T Consensus       368 ~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~----~~~~~l~is~~e~~t----~edid~l  438 (481)
T PRK04366        368 I-YDLPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPL----IVPEALMIEPTETES----KETLDAF  438 (481)
T ss_pred             h-CcccCCCCeeEEEEEECccccccCCCHHHHHHHHHHCCccCCcccccc----ccCCeEEEcccCCCC----HHHHHHH
Confidence            6 55443222223345553   2234567889999999999875332231    125689999877655    7999999


Q ss_pred             HHHHHHHHHHH
Q 009673          470 ADFIHEGVEIT  480 (529)
Q Consensus       470 a~~i~~~~~~~  480 (529)
                      ++.|.++.+..
T Consensus       439 ~~~l~~i~~~~  449 (481)
T PRK04366        439 IAAMKQIAEEA  449 (481)
T ss_pred             HHHHHHHHHHH
Confidence            99999887654

>PRK09105 putative aminotransferase; Provisional

Probab=99.91  E-value=5.5e-22  Score=206.53  Aligned_cols=311  Identities=16%  Similarity=0.127  Sum_probs=211.1

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.+.|..++|+  +|+.+++++...+.. . ..|+.      .. .+++.    +.+++.+|++++    +|.+++|+ +
T Consensus        44 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~Y~~------~~-~~~Lr----~aia~~~~v~~e----~I~it~Gs~~  106 (370)
T PRK09105         44 GAVFLNANECPLGPSPAARDAAARSAAL-S-GRYDL------EL-EDDLR----TLFAAQEGLPAD----HVMAYAGSSE  106 (370)
T ss_pred             CcEEecCCCCCCCCCHHHHHHHHHHHHH-h-cCCCC------ch-HHHHH----HHHHHHhCcChh----hEEEcCChHH
Confidence            55888888874  589999999876532 1 11221      11 33443    566778899875    56668887 9


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      ++..++.++++|||+|++++|.|..+..        .....|.  +++.++++ +++.+|++++++. .+ ++++|++++
T Consensus       107 ai~~~~~~l~~~gd~Vli~~P~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~-~~-~~~~v~l~n  173 (370)
T PRK09105        107 PLNYAVLAFTSPTAGLVTADPTYEAGWR--------AADAQGA--PVAKVPLR-ADGAHDVKAMLAA-DP-NAGLIYICN  173 (370)
T ss_pred             HHHHHHHHHcCCCCEEEEeCCChHHHHH--------HHHHcCC--eEEEecCC-CCCCCCHHHHHhc-CC-CCCEEEEeC
Confidence            9999999999999999999998765421        2334554  66666665 3578999999876 34 789999999


Q ss_pred             CCCCC--CCCHHHHHHHHHH--hCCEEEEecccccccccccccCCCCC----ccc-EEEecccccc--cCCCCeEEEeeC
Q 009673          260 SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RGPRGGMIFFKK  328 (529)
Q Consensus       260 s~~p~--~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~~----~aD-iv~~S~hK~l--~GprgG~i~~~~  328 (529)
                      |+||+  ..+.+++.++++.  +|+++|+|++|. .+..   .++...    +.+ +++.|++|++  +|+|.||+++++
T Consensus       174 P~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~-~f~~---~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~  249 (370)
T PRK09105        174 PNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYI-HFSD---APSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARP  249 (370)
T ss_pred             CCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchH-Hhcc---CcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCH
Confidence            99997  6777888877754  489999999963 2221   111111    234 6778999986  789999999987


Q ss_pred             CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEE
Q 009673          329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL  408 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~  408 (529)
                            ++.+.+... .  ....+.. ...+...+|..  ....++..+++.++++.+.+.|++.|+.+..+  ...+++
T Consensus       250 ------~~i~~l~~~-~--~~~~~~~-~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~--~~~f~~  315 (370)
T PRK09105        250 ------DLLAKLARF-G--HNPLPVP-AAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKKGYKCTPS--QANCFM  315 (370)
T ss_pred             ------HHHHHHHhc-C--CCCcCHH-HHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCC--CCcEEE
Confidence                  677766553 1  1112222 22222334432  12336667888899999999999888876653  233445


Q ss_pred             EccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          409 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      +++.   .+..++.+.|.+.||.+... .+     ..++++||++.       ++++++++.+.|++++
T Consensus       316 ~~~~---~~~~~l~~~L~~~gI~v~~~-~~-----~~~~~~Ris~~-------~~~~~~~l~~al~~~~  368 (370)
T PRK09105        316 VDVK---RPAKAVADAMAKQGVFIGRS-WP-----IWPNWVRVTVG-------SEEEMAAFRSAFAKVM  368 (370)
T ss_pred             EeCC---CCHHHHHHHHHHCCcEEecC-CC-----CCCCeEEEEcC-------CHHHHHHHHHHHHHHh
Confidence            6653   35677777777789998322 11     12578999964       3688999999988765

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=99.91  E-value=6e-22  Score=205.33  Aligned_cols=318  Identities=14%  Similarity=0.101  Sum_probs=205.2

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.++|..++|+  +|+.+++++...+.. . ..||.       ....++    ++.++++++++++    +|.+++|+ +
T Consensus        21 ~~i~l~~~~~~~~~p~~~~~a~~~~~~~-~-~~y~~-------~~~~~l----r~~ia~~~~~~~~----~i~it~Ga~~   83 (356)
T PRK08056         21 QLLDFSANINPLGMPVSLKRAIIDNLDC-A-ERYPD-------VEYRHL----HQALARHHQVPAS----WILAGNGETE   83 (356)
T ss_pred             hEEEeccccCCCCCCHHHHHHHHHHHHh-c-ccCcC-------ccHHHH----HHHHHHHhCcChh----hEEECCCHHH
Confidence            45888888885  689999999866542 1 12332       112333    3667788899875    56678888 8


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      ++..++.++ .||| +++++|.+..+.        ..+...|.  +++.++++++ ++.+| +++++.+.+ ++|+|+++
T Consensus        84 ~l~~~~~~l-~~g~-viv~~P~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~~-~~~~~~~~~-~~k~v~l~  149 (356)
T PRK08056         84 SIFAVVSGL-KPRR-AMIVTPGFAEYR--------RALQQVGC--EIRRYSLREADGWQLT-DAILEALTP-DLDCLFLC  149 (356)
T ss_pred             HHHHHHHHh-CCCC-EEEeCCCcHHHH--------HHHHHcCC--eEEEEecccccCCCcc-HHHHHhccC-CCCEEEEe
Confidence            888787776 7887 566666543221        12344555  6667666543 35666 455555654 89999999


Q ss_pred             CCCCCC--CCC---HHHHHHHHHHhCCEEEEeccccccccccccc-CCCCC--cccEEEecccccc--cCCCCeEEEeeC
Q 009673          259 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKK  328 (529)
Q Consensus       259 ~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~~~~--~aDiv~~S~hK~l--~GprgG~i~~~~  328 (529)
                      +|+||+  ..+   +++|.++|+++|+++|+|++ |.++...+.. ...+.  ...+++.|+||++  +|.|.||+++++
T Consensus       150 ~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~-y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~  228 (356)
T PRK08056        150 TPNNPTGLLPERQLLQAIAERCKSLNIALILDEA-FIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSD  228 (356)
T ss_pred             CCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecc-hhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCC
Confidence            999997  555   77889999999999999998 4444432211 11122  2458889999986  788999999854


Q ss_pred             CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchH-HHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCce
Q 009673          329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHL  406 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~  406 (529)
                      +     ++.+.+.+...+.   +.+.....+...++   ....+ ++..+++.++++.+.+.|++. |+.+..+  .+.+
T Consensus       229 ~-----~~~~~l~~~~~~~---~~~~~~~~~a~~~l---~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~--~~~~  295 (356)
T PRK08056        229 D-----AAVARMRRQQMPW---SINAFAALAGEVIL---QDRAYQQATWQWLAEEGARFYQALCALPLLTVWPG--RANY  295 (356)
T ss_pred             H-----HHHHHHHHhCCCC---chhHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC--CCcE
Confidence            2     5655555432221   11111212211223   22333 556777888999999999875 7776543  3566


Q ss_pred             EEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          407 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       407 ~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +|+++..   +..++.+.|.++||.+..+...   ....+++|||++.       ++++++.+.+.|+++++
T Consensus       296 ~~~~~~~---~~~~~~~~l~~~gI~v~~~~~f---~~~~~~~iRis~~-------~~~~~~~l~~~l~~~~~  354 (356)
T PRK08056        296 LFLRCER---PDIDLQRALLTQRILIRSCANY---PGLDSRYYRVAIR-------SAAENERLLAALRNVLT  354 (356)
T ss_pred             EEEEcCC---ChHHHHHHHHHCCeEEEECCCC---CCCCCCEEEEEEc-------CHHHHHHHHHHHHHHHc
Confidence            7877642   3456777777899999643211   1223468999963       36999999999987654

>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]

Probab=99.90  E-value=1.3e-21  Score=192.49  Aligned_cols=333  Identities=18%  Similarity=0.113  Sum_probs=221.9

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCC--CceeeecCChH-HHHHHHHHhhc
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENK--WGVNVQPLSGS-PANFEVYTAIL  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~--~~~~V~~~sGs-~A~~~~l~all  189 (529)
                      .+++.+.+|+...+...-..||..+   .|.   .    .|++.++++++-+.+.  -.-.|..|+|. +|+..++.+|.
T Consensus        78 ~ts~~a~~Av~~al~Sgk~N~Yaps---~G~---~----~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA  147 (447)
T KOG0259|consen   78 RTSQEAEQAVVDALRSGKGNGYAPS---VGI---L----PARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLA  147 (447)
T ss_pred             cCCHHHHHHHHHHHhcCCCCCcCCc---ccc---H----HHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhc
Confidence            4788899998877765544555321   111   1    2445555553332110  01246678887 99999999999


Q ss_pred             CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--C-
Q 009673          190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--D-  265 (529)
Q Consensus       190 ~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~-  265 (529)
                      +||..||++.|.+.        .|.......+  .++.+|++-++ +|.||++.+|.++++ +|.+|++..|+||.  . 
T Consensus       148 ~p~aNILlPrPGfp--------~Y~~~a~~~~--lEVR~ydlLPe~~weIDL~~veal~DE-NT~AivviNP~NPcGnVy  216 (447)
T KOG0259|consen  148 NPGANILLPRPGFP--------LYDTRAIYSG--LEVRYYDLLPEKDWEIDLDGVEALADE-NTVAIVVINPNNPCGNVY  216 (447)
T ss_pred             CCCCceecCCCCCc--------hHHHhhhhcC--ceeEeecccCcccceechHHHHHhhcc-CeeEEEEeCCCCCCcccc
Confidence            99999999987543        2222223344  47778887655 589999999999998 89988888898885  3 


Q ss_pred             --CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-c---c-cEEEecccc-cc-cCCCCeEEEeeCCCcchh--
Q 009673          266 --FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-Y---C-DVVTTTTHK-SL-RGPRGGMIFFKKDPVLGV--  334 (529)
Q Consensus       266 --~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~---a-Div~~S~hK-~l-~GprgG~i~~~~~~~~~~--  334 (529)
                        .-+++|+++|+++|+.+|.|+. |-.+++.+-...|+. .   + -+..++.+| |+ +|||.|||+.++..+...  
T Consensus       217 s~~HL~kiae~A~klgi~vIaDEV-Y~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~  295 (447)
T KOG0259|consen  217 SEDHLKKIAETAKKLGIMVIADEV-YGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDT  295 (447)
T ss_pred             cHHHHHHHHHHHHHhCCeEEehhh-cceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccch
Confidence              3478999999999999999998 444555543323332 1   2 256689999 44 999999999988642111  


Q ss_pred             HHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceEEEccCC
Q 009673          335 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRP  413 (529)
Q Consensus       335 ~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~~v~~~~  413 (529)
                      ...+.+..  +-....+|.....+|+-.-|+...++-|.....-++.|++..++.|++ +++.+........+.|+.+.-
T Consensus       296 ~~~q~~~~--~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~  373 (447)
T KOG0259|consen  296 KVVQGIKN--FLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNL  373 (447)
T ss_pred             HHHHHHHH--HHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccch
Confidence            11122221  112234555556667766677654444688888899999999999998 677744322234455554321


Q ss_pred             -----CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          414 -----MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       414 -----~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                           .+-|.+++.++.+|..+.+    +||.... .++++||.+.      +.++.+++..++|++...+-
T Consensus       374 s~~~~~~dD~dFc~kL~~Eesv~~----LPG~af~-~~nw~Ri~i~------~~~~~leea~~Rik~Fc~RH  434 (447)
T KOG0259|consen  374 SLFPDIEDDVDFCQKLAREESVIC----LPGQAFG-LKNWLRIVIT------VEEEMLEEAFSRIKEFCDRH  434 (447)
T ss_pred             hhhccccccHHHHHHHhhhcceEE----ecccccc-CCCeEEEEEc------cChHHHHHHHHHHHHHHHhh
Confidence                 1224456777778999998    7887532 3789999753      55688888888888876543

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=99.90  E-value=5.2e-22  Score=206.04  Aligned_cols=315  Identities=16%  Similarity=0.111  Sum_probs=206.5

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeec-CChH-
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGS-  178 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~-~sGs-  178 (529)
                      +.|+|..++|+  +++.+++++...+.. + .+|+.      .. ..+++    +.+++++|++++    +|.+ ++|+ 
T Consensus        35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~-~-~~y~~------~~-~~~lr----~~ia~~~~~~~~----~i~~~~~Ga~   97 (361)
T PRK00950         35 SIIKLGSNENPLGPSPKAVEAIEKELSK-I-HRYPE------PD-APELR----EALSKYTGVPVE----NIIVGGDGMD   97 (361)
T ss_pred             ceEEccCCCCCCCCCHHHHHHHHHHHHh-h-cCCCC------CC-HHHHH----HHHHHHhCCCHH----HEEEeCCCHH
Confidence            45888888774  568888888765542 1 22332      11 13444    667788898875    4555 7887 


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      +++..++.++++|||+|++++|.+..+.        ......|.  +++.++.+ +++.+|++++++.++. ++++|+++
T Consensus        98 ~~i~~~~~~~~~~gd~vlv~~p~y~~~~--------~~~~~~g~--~~~~~~~~-~~~~~~~~~l~~~~~~-~~~~v~~~  165 (361)
T PRK00950         98 EVIDTLMRTFIDPGDEVIIPTPTFSYYE--------ISAKAHGA--KPVYAKRE-EDFSLDVDSVLNAITE-KTKVIFLC  165 (361)
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCChHHHH--------HHHHHcCC--EEEEeecC-CCCCcCHHHHHHHhcc-CCCEEEEe
Confidence            7778888888999999999998654321        12233454  55666544 4578999999998876 89999988


Q ss_pred             CCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcc--cEEEecccccc--cCCCCeEEEeeCCCcc
Q 009673          259 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYC--DVVTTTTHKSL--RGPRGGMIFFKKDPVL  332 (529)
Q Consensus       259 ~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~a--Div~~S~hK~l--~GprgG~i~~~~~~~~  332 (529)
                      +++||+  ..+.+++.++|+++|+++|+|++|. ++..... .......  -+++.|++|.+  +|.|.||+++++    
T Consensus       166 ~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~-~~~~~~~-~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~----  239 (361)
T PRK00950        166 TPNNPTGNLIPEEDIRKILESTDALVFVDEAYV-EFAEYDY-TPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE----  239 (361)
T ss_pred             CCCCCCCCCcCHHHHHHHHHHCCcEEEEECchh-hhCccch-HHHHHhcCCEEEEEeehHhhcCchhhcchhcCCH----
Confidence            888887  7899999999999999999999964 3321111 0001111  27779999987  578899999987    


Q ss_pred             hhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEcc
Q 009673          333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL  411 (529)
Q Consensus       333 ~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~  411 (529)
                        ++.+.+.....+..  .+.. ..+++..++.   ..+ +++..+++.++++.+.+.|.   +.+..+  .+.++|+++
T Consensus       240 --~~~~~~~~~~~~~~--~~~~-~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~l~---~~~~~~--~~~~i~~~~  306 (361)
T PRK00950        240 --WLIDYYMRAKTPFS--LTRL-SQAAAIAALS---DKEYIEKSIEHGIKSREYLYNELP---FKVYPS--EANFVLVDV  306 (361)
T ss_pred             --HHHHHHHHhcCCCC--CCHH-HHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhhcC---eeECCC--cceEEEEEC
Confidence              67666654433222  1122 2222222332   223 35555566666666655553   554432  346677777


Q ss_pred             CCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          412 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       412 ~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      .  +.+..++.+.|.++||.+..+...   +...+++|||++.       +++|++++.+.|++++
T Consensus       307 ~--~~~~~~~~~~l~~~gv~v~~~~~f---~~~~~~~lRis~~-------~~~~~~~l~~~L~~il  360 (361)
T PRK00950        307 T--PMTAKEFCEELLKRGVIVRDCTSF---RGLGDYYIRVSIG-------TFEENERFLEILKEIV  360 (361)
T ss_pred             C--CCCHHHHHHHHHHCCEEEeeCCcc---CCCCCCeEEEECC-------CHHHHHHHHHHHHHHh
Confidence            3  456778888888889999543211   1223578999964       3689999999998765

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=99.90  E-value=1.2e-21  Score=206.93  Aligned_cols=330  Identities=15%  Similarity=0.125  Sum_probs=203.7

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhcc----CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNK----YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS  176 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~----y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s  176 (529)
                      +.++|..+++.  +++.+.+++...+...    ...+|.      ......++++.+.+++.+..|.+.+.  -+|.+|+
T Consensus        35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~------~~~G~~~LR~aia~~~~~~~g~~~~~--~~I~it~  106 (409)
T PRK07590         35 KIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYG------PEQGYDFLREKIAENDYQARGCDISA--DEIFISD  106 (409)
T ss_pred             ceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCC------CCCCCHHHHHHHHHHHHHhcCCcCCh--hhEEECC
Confidence            56888888764  5788889888776531    111231      11223355555556666666554321  2677899


Q ss_pred             hH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccce---------EEEEEcccCCC-CCCCCHHHHHH
Q 009673          177 GS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY---------FESMPYRLDES-TGLVDYDMLEK  245 (529)
Q Consensus       177 Gs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~---------~~~v~~~v~~~-~~~iD~d~le~  245 (529)
                      |+ +++.. +..+++|||+|++.+|.|.++..        .+...|..         .++++++++++ ++.+|.++   
T Consensus       107 Ga~~al~~-l~~~~~~gd~V~v~~P~Y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~---  174 (409)
T PRK07590        107 GAKCDTGN-ILDIFGPDNTIAVTDPVYPVYVD--------TNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE---  174 (409)
T ss_pred             CHHHHHHH-HHHhcCCCCEEEEeCCCCcchHH--------HHHHcCCcccccccccccceeEeecccccCCcccCcc---
Confidence            98 77765 45677999999999998765432        22233331         12667777643 34455321   


Q ss_pred             HhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC---Cc---ccEEEecccc
Q 009673          246 TAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY---CDVVTTTTHK  314 (529)
Q Consensus       246 ~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~~---aDiv~~S~hK  314 (529)
                          .++|+|++++|+||+  ..   .+++|.++|++||++||+|++| ..+.+.+..+.++   +.   .-|+++|++|
T Consensus       175 ----~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y-~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK  249 (409)
T PRK07590        175 ----EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAY-EAFISDPSLPHSIYEIEGARECAIEFRSFSK  249 (409)
T ss_pred             ----cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccc-hhhccCCCCCcchhhCCCcccceEEEecCcc
Confidence                379999998999997  33   4667888899999999999985 3444333222222   22   1267899999


Q ss_pred             cc--cCCCCeEEEeeCCCcchhHHHhhh------------cccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHH
Q 009673          315 SL--RGPRGGMIFFKKDPVLGVELESAI------------NNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV  380 (529)
Q Consensus       315 ~l--~GprgG~i~~~~~~~~~~~l~~~i------------~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~  380 (529)
                      ++  +|.|.||+++++      ++.+.+            .........+.+...+. +++.++..-.....++..+.+.
T Consensus       250 ~~~~pGlRiG~~i~~~------~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~-a~~~~l~~~~~~~~~~~~~~~~  322 (409)
T PRK07590        250 TAGFTGTRCAYTVVPK------ELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQR-AAEAVYSPEGKAQIKELIDYYM  322 (409)
T ss_pred             ccCCcCceeEEEEcCH------HHhhhccccchhhhHHHHHHHHhhcccCcCHHHHH-HHHHHhcCCcHHHHHHHHHHHH
Confidence            86  899999999987      555421            11111111122223333 3333443211123456677888


Q ss_pred             HHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHH-HhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCcc
Q 009673          381 SNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVE-KILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTT  458 (529)
Q Consensus       381 ~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~-~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt  458 (529)
                      ++++.+.+.|++.|+.+..+ ..++++|++++. +++..++. .+++++||.+.    ||.. +....+++||++.    
T Consensus       323 ~~r~~l~~~L~~~~~~~~~~-~g~~f~wi~~~~-~~~~~~~~~~l~~~~gv~v~----pg~~f~~~~~~~iRi~~~----  392 (409)
T PRK07590        323 ENAKIIREGLESAGFEVYGG-VNAPYIWVKTPD-GMSSWDFFDKLLQEANVVGT----PGSGFGPSGEGYFRLSAF----  392 (409)
T ss_pred             HHHHHHHHHHHhcCCceecC-CcceEEEEECCC-CCCHHHHHHHHHHHCCEEEe----ChhHhCCCCCCEEEEEcc----
Confidence            89999999999888776543 235678888854 45555554 45567899994    4433 1223568999841    


Q ss_pred             CCCCHHHHHHHHHHHHHH
Q 009673          459 RGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       459 ~g~~~~d~~~la~~i~~~  476 (529)
                        .+++++++..+.|.++
T Consensus       393 --~~~~~l~~~l~rl~~~  408 (409)
T PRK07590        393 --GSRENVLEAMERIKKA  408 (409)
T ss_pred             --CCHHHHHHHHHHHHhh
Confidence              2478888888888664

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=99.90  E-value=1.3e-21  Score=204.29  Aligned_cols=321  Identities=14%  Similarity=0.117  Sum_probs=208.9

Q ss_pred             ceeEecCCCC--CcHHHHHHHhhhhhccC-CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC----CCCCCCceeeecCC
Q 009673          104 SLELIASENF--TSRAVMEAVGSCLTNKY-SEGLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNVQPLS  176 (529)
Q Consensus       104 ~i~L~asen~--~~~~V~eal~~~l~~~y-~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g----~~~~~~~~~V~~~s  176 (529)
                      .+.|..++|+  +|+.+++++.+.+.+.+ ..+||.    .|   ..++++...+++.+.+|    ++++    +|.+|+
T Consensus        30 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~----~G---~~~Lr~aia~~~~~~~~~~~~v~~~----~I~it~   98 (374)
T PRK02610         30 LDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYPD----GG---HEALKQAIAEYVNESAAGSSQITPA----NISVGN   98 (374)
T ss_pred             eeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCCC----Cc---hHHHHHHHHHHhCccccccCCCCHH----HEEEcC
Confidence            4678788874  68999999987665432 123432    12   23455444455544432    4443    577899


Q ss_pred             hH-HHHHHHHHhhcCCCC-EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cC
Q 009673          177 GS-PANFEVYTAILKPHD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FR  251 (529)
Q Consensus       177 Gs-~A~~~~l~all~pGD-~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~---~~  251 (529)
                      |+ +++..++.+++.+|| +|++++|.|.++.        ..+...|.  +++.++++++++.+|++++++.++.   .+
T Consensus        99 Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~--------~~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~  168 (374)
T PRK02610         99 GSDELIRSLLIATCLGGEGSILVAEPTFSMYG--------ILAQTLGI--PVVRVGRDPETFEIDLAAAQSAIEQTQNPP  168 (374)
T ss_pred             ChHHHHHHHHHHHcCCCCCeEEEcCCChHHHH--------HHHHHcCC--EEEEecCCcccCCCCHHHHHHHHHhhcCCC
Confidence            98 888878888888886 8999999775432        13345565  6677777655689999999998874   48


Q ss_pred             CcEEEEcCCCCCC--CCCHHHHHHHHH-HhCCEEEEecccccccccccccCCCCC-cc-cEEEecccccc--cCCCCeEE
Q 009673          252 PKLIIAGASAYPR--DFDYPRMRQIAD-AVGALLMMDMAHISGLVAASVVADPFK-YC-DVVTTTTHKSL--RGPRGGMI  324 (529)
Q Consensus       252 pklIi~~~s~~p~--~~d~~~i~~ia~-~~g~~livD~ah~~Gli~~~~~~~~~~-~a-Div~~S~hK~l--~GprgG~i  324 (529)
                      +|+|++++|+||+  ..+.+++.++++ .+|++||+|+++. .+.... ....+. +. -|++.|++|++  +|+|.||+
T Consensus       169 ~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~-~~~~~~-~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~  246 (374)
T PRK02610        169 VRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYF-EFSQTT-LVGELAQHPNWVILRTFSKAFRLAAHRVGYA  246 (374)
T ss_pred             ceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEecccc-ccCccc-hHHHHhcCCCEEEEEecchhccCcccceeee
Confidence            9999998899997  556666555543 1489999999853 332111 001111 11 27789999986  89999999


Q ss_pred             EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCC
Q 009673          325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSD  403 (529)
Q Consensus       325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~  403 (529)
                      ++++      ++.+.+.....+.  +.+...+.++ ..+++..  +.+.+..+++.++++.+.+.|++. |+.+.+.  .
T Consensus       247 v~~~------~l~~~l~~~~~~~--~~~~~~q~a~-~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~--~  313 (374)
T PRK02610        247 IGHP------ELIAVLEKVRLPY--NLPSFSQLAA-QLALEHR--QELLAAIPEILQERDRLYQALQELPQLRVWPS--A  313 (374)
T ss_pred             ecCH------HHHHHHHHhcCCC--CCCHHHHHHH-HHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEeCCC--c
Confidence            9977      6777766543222  2233333332 3344321  234444455566677788888774 6665432  3


Q ss_pred             CceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          404 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       404 ~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +.++|+++.. +.+..++.+.|.++||.+..          .++++||++.       +++++++..+.|++++.
T Consensus       314 g~f~~~~l~~-~~~~~~~~~~l~~~gi~v~~----------~~~~lRls~~-------~~~~~~~~l~~l~~~l~  370 (374)
T PRK02610        314 ANFLYLRLSQ-DAALAALHQALKAQGTLVRH----------TGGGLRITIG-------TPEENQRTLERLQAALT  370 (374)
T ss_pred             ceEEEEeCCC-CCCHHHHHHHHHHCCEEEEe----------CCCeEEEeCC-------CHHHHHHHHHHHHHHHh
Confidence            5677887753 45667788889999999842          1468999863       14678888888877664

>PRK03321 putative aminotransferase; Provisional

Probab=99.90  E-value=6.4e-22  Score=204.74  Aligned_cols=313  Identities=17%  Similarity=0.140  Sum_probs=212.5

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.|+|..+++.  +++.+++++...+.. + ..||.       ...++++    +.+++++|++++    +|.+++|+ +
T Consensus        23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~-------~g~~~lr----~~ia~~~~~~~~----~I~~~~G~~~   85 (352)
T PRK03321         23 GAIKLSSNETPFGPLPSVRAAIARAAAG-V-NRYPD-------MGAVELR----AALAEHLGVPPE----HVAVGCGSVA   85 (352)
T ss_pred             cceeccCCCCCCCCCHHHHHHHHHHHHh-c-CcCCC-------CcHHHHH----HHHHHHhCcCHH----HEEECCCHHH
Confidence            35788777663  577999999876542 1 22331       1233444    667788888764    56678998 7


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      ++..++.++++|||+|++++|.+..+.        ......|.  +++.+++++ ++.+|++++++.+++ ++++|++++
T Consensus        86 ~l~~~~~~~~~~gd~Vli~~p~y~~~~--------~~~~~~g~--~~~~v~~~~-~~~~~~~~l~~~~~~-~~~~v~l~~  153 (352)
T PRK03321         86 LCQQLVQATAGPGDEVIFAWRSFEAYP--------ILVQVAGA--TPVQVPLTP-DHTHDLDAMAAAITD-RTRLIFVCN  153 (352)
T ss_pred             HHHHHHHHhcCCCCEEEeCCCCHHHHH--------HHHHHcCC--EEEEccCCC-CCCCCHHHHHHhhcc-CCCEEEEeC
Confidence            777788888999999999987653221        11233454  666777763 478999999999977 899999988


Q ss_pred             CCCCC--CCCHHHHHHHHHH--hCCEEEEecccccccccccccCCCCC----ccc-EEEecccccc--cCCCCeEEEeeC
Q 009673          260 SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RGPRGGMIFFKK  328 (529)
Q Consensus       260 s~~p~--~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~~----~aD-iv~~S~hK~l--~GprgG~i~~~~  328 (529)
                      ++||+  ..+.+++.++|+.  +|+++++|++|. ++...+..+.++.    ..+ ++++|++|.+  +|.|.||+++++
T Consensus       154 p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~  232 (352)
T PRK03321        154 PNNPTGTVVTPAELARFLDAVPADVLVVLDEAYV-EYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP  232 (352)
T ss_pred             CCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHH-HhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH
Confidence            88887  7799999999987  599999999853 4443322212121    122 6778999987  588999999987


Q ss_pred             CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEE
Q 009673          329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL  408 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~  408 (529)
                            ++.+.+.+...+.  +.+...+.++ ..++..  ...+.+..+++.++++.+.+.|.+.|+.+..+  ...++|
T Consensus       233 ------~~~~~~~~~~~~~--~~s~~~q~~a-~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~--~g~~i~  299 (352)
T PRK03321        233 ------EVIAALRKVAVPF--SVNSLAQAAA-IASLAA--EDELLERVDAVVAERDRVRAALRAAGWTVPPS--QANFVW  299 (352)
T ss_pred             ------HHHHHHHHhcCCC--CCCHHHHHHH-HHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCCC--CCCEEE
Confidence                  6777776543222  2223333333 224432  23455566667777788889998888765433  345677


Q ss_pred             EccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          409 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      +++.   .+..++.+.|+++||.+..         +...+|||++.       +.++++++.++|++++
T Consensus       300 i~l~---~~~~~~~~~l~~~gI~v~~---------~~~~~iRi~~~-------~~~~~~~~~~al~~~~  349 (352)
T PRK03321        300 LPLG---ERTADFAAAAAEAGVVVRP---------FAGEGVRVTIG-------APEENDAFLRAARAWR  349 (352)
T ss_pred             EeCC---CCHHHHHHHHHHCCEEEEc---------cCCCcEEEeeC-------CHHHHHHHHHHHHHHh
Confidence            7763   2456788888899999853         12356999963       3799999999998764

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=99.90  E-value=1.1e-21  Score=204.61  Aligned_cols=318  Identities=17%  Similarity=0.151  Sum_probs=211.4

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.|+|..++|+  +++.+.+++...... . ..|+.      ... +.+    ++.+++++|++++    +|.+++|+ +
T Consensus        37 ~~i~l~~~~~~~~~~~~~~~al~~~~~~-~-~~Y~~------~~g-~~l----r~~ia~~~~~~~~----~i~~t~G~~~   99 (371)
T PRK05166         37 RIAKLGSNENPLGPSPAVRRAFADIAEL-L-RLYPD------PQG-RAL----REAIAARTGVPAD----RIILGNGSED   99 (371)
T ss_pred             ceEEcCCCCCCCCCCHHHHHHHHHHHHH-h-hcCCC------CcH-HHH----HHHHHHHhCcCHH----HEEEcCCHHH
Confidence            45888877764  688899988754322 1 12332      111 233    3667778898764    56678988 8


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      ++..++.++++|||+|++.+|.|..+..        .+...|.  ++++++++ +++.+|++++++.+++ ++|+|++++
T Consensus       100 ~l~~~~~~~~~~gd~vli~~P~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~~~~~l~~~~~~-~~~~v~l~~  167 (371)
T PRK05166        100 LIAVICRAVLRPGDRVVTLYPSFPLHED--------YPTMMGA--RVERVTVT-PDLGFDLDALCAAVAR-APRMLMFSN  167 (371)
T ss_pred             HHHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCC--eEEEeecC-CCCCCCHHHHHHhhhc-CCCEEEEeC
Confidence            8888889999999999999987754321        2234454  66666665 3578999999999877 899999999


Q ss_pred             CCCCC--CCCHHHHHHHHHH--hCCEEEEecccccccccccccCCCC---C--c-ccEEEecccccc--cCCCCeEEEee
Q 009673          260 SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPF---K--Y-CDVVTTTTHKSL--RGPRGGMIFFK  327 (529)
Q Consensus       260 s~~p~--~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~---~--~-aDiv~~S~hK~l--~GprgG~i~~~  327 (529)
                      ++||+  ..+.+++.+|++.  .++++++|+++ ..+...+..++.+   .  + .-|++.|++|.+  +|+|.||++..
T Consensus       168 p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~  246 (371)
T PRK05166        168 PSNPVGSWLTADQLARVLDATPPETLIVVDEAY-AEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVS  246 (371)
T ss_pred             CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcH-HHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecC
Confidence            99997  6777777777664  47899999984 3444322222211   1  1 137889999986  89999998875


Q ss_pred             CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673          328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV  407 (529)
Q Consensus       328 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~  407 (529)
                      ++     ++.+.+.....+  .+.+...+.++ ..++..  ...+++..+.+.++++.+.+.|++.|+.+..+  ...++
T Consensus       247 ~~-----~l~~~~~~~~~~--~~~~~~~q~~~-~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~p~--~g~fl  314 (371)
T PRK05166        247 DP-----ELVGLLDRVRTP--FNVNGAAQAAA-LAALDD--EEHLAKGVALALAERERLKKELAEMGYRIAPS--RANFL  314 (371)
T ss_pred             CH-----HHHHHHHHhccC--CCCCHHHHHHH-HHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCcCeeCCC--cCCEE
Confidence            43     666666543322  22222222222 223431  12346667788888999999999888876543  24567


Q ss_pred             EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      |+++..   +..++.+.|.++||.+..    |..+ ..+++|||++.       +.++++++.+.|++++
T Consensus       315 ~~~~~~---~~~~l~~~l~~~gi~v~p----~~~~-~~~~~iRi~~~-------~~~~~~~l~~~l~~i~  369 (371)
T PRK05166        315 FFDARR---PASAVAEALLRQGVIVKP----WKQP-GFETFIRVSIG-------SPEENDHFVAALDKVL  369 (371)
T ss_pred             EEeCCC---CHHHHHHHHHHCCeEEec----CCCC-CCCCeEEEEcC-------CHHHHHHHHHHHHHHh
Confidence            777542   456777788788999954    4321 23678999964       2578899988887654

>PRK10534 L-threonine aldolase; Provisional

Probab=99.90  E-value=7.4e-22  Score=202.67  Aligned_cols=317  Identities=16%  Similarity=0.186  Sum_probs=202.7

Q ss_pred             eeEecCCCC-CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673          105 LELIASENF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE  183 (529)
Q Consensus       105 i~L~asen~-~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~  183 (529)
                      |+|..++|+ +||.+++++.......       .+ |+......++|    +.+++++|+++.     +.+.+|++++..
T Consensus         2 ~~~~~~~~~~p~~~~~~a~~~~~~~~-------~~-Y~~~~~~~~L~----~~la~~~g~~~~-----~v~~~g~~a~~~   64 (333)
T PRK10534          2 IDLRSDTVTRPSRAMLEAMMAAPVGD-------DV-YGDDPTVNALQ----DYAAELSGKEAA-----LFLPTGTQANLV   64 (333)
T ss_pred             cccccccCCCCCHHHHHHHHhccCCC-------cc-cCCCHHHHHHH----HHHHHHhCCCeE-----EEeCchHHHHHH
Confidence            456666665 7899999987543211       12 32334455666    667888998762     345677788998


Q ss_pred             HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCcEEEEc
Q 009673          184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAG  258 (529)
Q Consensus       184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-----~pklIi~~  258 (529)
                      ++.++++|||+|+++.+.|...+..+      .....+ ..+++.++++ +++.+|+++|++++++.     ++++|+++
T Consensus        65 ~l~~~~~~gd~vi~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~  136 (333)
T PRK10534         65 ALLSHCERGEEYIVGQAAHNYLYEAG------GAAVLG-SIQPQPIDAA-ADGTLPLDKVAAKIKPDDIHFARTRLLSLE  136 (333)
T ss_pred             HHHHhcCCCCeeEEechhhhhHhcCC------chHHhc-CceEEeecCC-CCCCCCHHHHHHhhcccCcCcccceEEEEe
Confidence            88899999999998776553211100      011222 1355666665 46899999999988653     58899998


Q ss_pred             CCCCCCCCCHH---HHHHHHHHhCCEEEEecccccccccc-cccCCCC-CcccEEEecccccccCCCCeEEEeeCCCcch
Q 009673          259 ASAYPRDFDYP---RMRQIADAVGALLMMDMAHISGLVAA-SVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLG  333 (529)
Q Consensus       259 ~s~~p~~~d~~---~i~~ia~~~g~~livD~ah~~Gli~~-~~~~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~  333 (529)
                      +|+++...+.+   +|.++|+++|++|++|+||..+.... +.....+ .+.|.++.|+||.++.+.||++++++     
T Consensus       137 np~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~~G~~~~~~~-----  211 (333)
T PRK10534        137 NTHNGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNR-----  211 (333)
T ss_pred             cCCCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCcccceEEcCH-----
Confidence            88777766654   55678899999999999976432111 1111011 24576667899988666566788877     


Q ss_pred             hHHHhhhcccccCCCCCCChHHHH-HHH-HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEcc
Q 009673          334 VELESAINNAVFPGLQGGPHNHTI-GGL-AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL  411 (529)
Q Consensus       334 ~~l~~~i~~~~~p~~~g~p~~~~i-aal-a~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~  411 (529)
                       ++.+.+.....+. .++...... ++. ..+|+.     ..++.++..++++++.+.|.+.|+++..+  .++++++++
T Consensus       212 -~~i~~~~~~~~~~-~~~~~~~~~~~a~~~~~l~~-----~~~~~~~~~~~r~~l~~~L~~~g~~~~~~--~~nfv~~~~  282 (333)
T PRK10534        212 -DYIKRARRWRKMT-GGGMRQAGILAAAGLYALKH-----NVARLQEDHDNAAWLAEQLREAGADVMRQ--DTNMLFVRV  282 (333)
T ss_pred             -HHHHHHHHHHHHh-CCchhhHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHhCCCccCCC--CceEEEEEC
Confidence             6777666543322 111111111 111 112321     23445556677889999999999987654  356778777


Q ss_pred             CCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          412 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       412 ~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      ..  .+..++.+.|.++||.+.    |+       ..+|++...   | +++++++++.+.|++.+
T Consensus       283 ~~--~~~~~~~~~l~~~gi~v~----~~-------~~~rl~~~~---r-~t~e~~~~~~~~l~~~~  331 (333)
T PRK10534        283 GE--EQAAALGEYMRERNVLIN----AS-------PIVRLVTHL---D-VSREQLAEVVAHWRAFL  331 (333)
T ss_pred             Cc--hhHHHHHHHHHHcCeeec----CC-------ceEEEEEEe---C-CCHHHHHHHHHHHHHHh
Confidence            52  235678899999999994    32       257886532   2 46899999999998655

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.90  E-value=3.8e-21  Score=202.87  Aligned_cols=328  Identities=18%  Similarity=0.196  Sum_probs=214.0

Q ss_pred             ecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673          108 IASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF  182 (529)
Q Consensus       108 ~asen~~----~~~V~eal~~~l~~~y~~G~p~~r~~~g-~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~  182 (529)
                      ..|++|+    .|+|++++...+. +|..+..+.|...| .+...++|    +.+++++|.+.     .+..+||++||.
T Consensus        50 ~~sn~ylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~-----~~~~~SG~~An~  119 (406)
T PRK13393         50 WCSNDYLGMGQHPAVLAAMHEALD-TCGAGAGGTRNISGTNHYHVLLE----AELADLHGKEA-----ALLFTSGYVSNW  119 (406)
T ss_pred             eecccccCCCCCHHHHHHHHHHHH-HcCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEeCCcHHHHH
Confidence            4566664    7899999988774 56555555554433 33445555    77889999753     356799999999


Q ss_pred             HHHHhhcC--CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEEEE
Q 009673          183 EVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIA  257 (529)
Q Consensus       183 ~~l~all~--pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~---~~pklIi~  257 (529)
                      .++.++..  +||.|+.....|+..+.        .+...|.  +...++      ..|++++++.++.   .++++|++
T Consensus       120 ~ai~~l~~~~~g~~I~~~~~~H~s~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~~~~~v~~  183 (406)
T PRK13393        120 AALSTLGSRLPGCVILSDELNHASMIE--------GIRHSRA--EKRIFR------HNDPADLERKLSDLDPHRPKLVAF  183 (406)
T ss_pred             HHHHHhhcCCCCCEEEEccchhHHHHH--------HHHHcCC--eEEEeC------CCCHHHHHHHHHhccCCCCEEEEE
Confidence            99988765  88888877777654432        1223343  333333      2477788777753   25678888


Q ss_pred             cCCCCC--CCCCHHHHHHHHHHhCCEEEEecccccccccc-c--ccC-CCC-CcccEEEecccccccCCCCeEEEeeCCC
Q 009673          258 GASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--VVA-DPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDP  330 (529)
Q Consensus       258 ~~s~~p--~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~--~~~-~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~~  330 (529)
                      ++++++  ...|+++|.++|+++|+++++|++|..|+... +  ... ..+ +..|++++|++|.++ ..|||+++++  
T Consensus       184 ~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g-~~GG~~~~~~--  260 (406)
T PRK13393        184 ESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFG-VMGGYITGSA--  260 (406)
T ss_pred             cCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhc-ccCceeeCCH--
Confidence            765544  37899999999999999999999998786432 1  110 111 235889999999984 4579998876  


Q ss_pred             cchhHHHhhhcccccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEE
Q 009673          331 VLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV  409 (529)
Q Consensus       331 ~~~~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v  409 (529)
                          ++.+.+.....++. .++.+....++...+++......  ...+++.++++++.+.|++.|++++.+  ...++.+
T Consensus       261 ----~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~i~~v  332 (406)
T PRK13393        261 ----ALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASS--AERERHQDRVARLRARLDKAGIPHLPN--PSHIVPV  332 (406)
T ss_pred             ----HHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHcCCCcCCC--CCCeEEE
Confidence                66666554322221 23334444455556777654322  234566788899999998888876643  2344444


Q ss_pred             ccCCCCCcHHHHHHhHhc-CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          410 DLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       410 ~~~~~~i~~~~~~~~L~~-~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      .+.. ..+...+.+.|.+ +||.+.....|.  .+.+.+.|||+.+..+    +++|++++++.|++++..
T Consensus       333 ~~~~-~~~~~~l~~~L~~~~Gi~v~~~~~p~--~p~g~~~iRis~~~~~----t~edid~l~~~l~~~~~~  396 (406)
T PRK13393        333 MVGD-PVLCKQISDELLDRYGIYVQPINYPT--VPRGTERLRITPSPLH----TDADIEHLVQALSEIWAR  396 (406)
T ss_pred             EeCC-HHHHHHHHHHHHHhCCEEEEeECCCC--CCCCCceEEEEECCCC----CHHHHHHHHHHHHHHHHh
Confidence            3321 1133556666655 799997643332  1223468999987654    589999999999988753

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=99.90  E-value=6.4e-22  Score=211.36  Aligned_cols=344  Identities=15%  Similarity=0.161  Sum_probs=207.9

Q ss_pred             cceeEecCCC-CCcHHHHHHHhhhh-hccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCC-ceeeecCChH-
Q 009673          103 KSLELIASEN-FTSRAVMEAVGSCL-TNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKW-GVNVQPLSGS-  178 (529)
Q Consensus       103 ~~i~L~asen-~~~~~V~eal~~~l-~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~-~~~V~~~sGs-  178 (529)
                      +.|++..++. +.++..++++...+ ...    ||.     ........|+.+.+++.+.++...... ..+|.+++|+ 
T Consensus        95 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~----Y~~-----p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat  165 (521)
T TIGR03801        95 DIISYVIDQLGFDPDAFLYEMCDGIIGDN----YPV-----PDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGT  165 (521)
T ss_pred             HHHhhcCCCCCCCCCHHHHHHHHHhhcCC----CCC-----CCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHH
Confidence            4467766663 33445555555443 222    321     112234566666667776654321111 0267778887 


Q ss_pred             HHHHHHHHh-----hcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-C-----CCCCHHHHHHHh
Q 009673          179 PANFEVYTA-----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-T-----GLVDYDMLEKTA  247 (529)
Q Consensus       179 ~A~~~~l~a-----ll~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~-----~~iD~d~le~~i  247 (529)
                      +|+..++.+     +++|||+|++++|.|..+..        .+...+...++++++.+++ .     |.+|.+++++++
T Consensus       166 ~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~--------~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~  237 (521)
T TIGR03801       166 AAMCYIFDSLKANELLKKGDKIALMTPIFTPYLE--------IPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLR  237 (521)
T ss_pred             HHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHH--------HHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhc
Confidence            888888876     78999999999997754421        2233443457777766532 2     789999999988


Q ss_pred             hhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHh--CCEEEEecccccccccccccCCCCC---cccEEEecccccc-
Q 009673          248 ILFRPKLIIAGASAYPR--DF---DYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSL-  316 (529)
Q Consensus       248 ~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~~---~aDiv~~S~hK~l-  316 (529)
                      ++ ++|+|++++|+||+  ..   .+++|.++|++|  +++||+|+++. .+.. + ..+.+.   .--+++.|++|++ 
T Consensus       238 ~~-~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~-~f~~-~-~~sl~~~~~~~vI~v~SfSK~fg  313 (521)
T TIGR03801       238 DP-SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYG-TFVD-D-FRSLFAELPYNTIGVYSFSKYFG  313 (521)
T ss_pred             CC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCch-hhcc-c-ccchhhhCCCCEEEEEcchhhcc
Confidence            76 89999999999997  44   477888889987  99999999854 3332 1 112111   1238889999986 


Q ss_pred             -cCCCCeEEEeeCCCc---c---h-hHHHhhhc------------------------ccccCCCC--CCChHHHHH--HH
Q 009673          317 -RGPRGGMIFFKKDPV---L---G-VELESAIN------------------------NAVFPGLQ--GGPHNHTIG--GL  360 (529)
Q Consensus       317 -~GprgG~i~~~~~~~---~---~-~~l~~~i~------------------------~~~~p~~~--g~p~~~~ia--al  360 (529)
                       +|||.||++++++..   .   + .+..+.++                        ........  ++|...+++  ++
T Consensus       314 ~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~  393 (521)
T TIGR03801       314 ATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSL  393 (521)
T ss_pred             CchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHH
Confidence             899999999986310   0   0 00111111                        00000111  233333333  33


Q ss_pred             HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec-CCCCCceEEEccCCCC---------------CcH-HHHHH
Q 009673          361 AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS-GGSDNHLVLVDLRPMG---------------IDG-ARVEK  423 (529)
Q Consensus       361 a~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~-~gt~~~~~~v~~~~~~---------------i~~-~~~~~  423 (529)
                      ..+++. .....++.++.+.++++.+.+.|   |+.+.. +....+++++|+...+               .+. +.+.+
T Consensus       394 ~all~~-~~~y~~~~~~~~~~R~~~l~~~L---g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~  469 (521)
T TIGR03801       394 FALMDK-ENAYKAETKDICRRREKLLFRGL---GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFR  469 (521)
T ss_pred             HHHhcc-chhHHHHHHHHHHHHHHHHHHhc---CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHH
Confidence            323332 11223566677778888777777   554321 2223567788886321               123 44667


Q ss_pred             hHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          424 ILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       424 ~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      ++++.||.+    +||......++++||++..     .+++++.++.+.|.+++...
T Consensus       470 L~~e~gV~v----~PG~~Fg~~~~~vRisla~-----l~~~~~~~~~~rl~~~~~~~  517 (521)
T TIGR03801       470 LAEETGIVL----LPGGGFGGPEWSVRVSLAN-----LNEYDYAEIGRAIRKILDEY  517 (521)
T ss_pred             HHHhCCEEE----eCchhcCCCCCeEEEEecC-----CCHHHHHHHHHHHHHHHHHH
Confidence            778999999    6776522235679999742     45789999999999888654

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=99.90  E-value=2.3e-21  Score=201.62  Aligned_cols=338  Identities=14%  Similarity=0.088  Sum_probs=209.7

Q ss_pred             hhhcccCChHHHHHHHHHHHH-hhcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 009673           80 DYSLGEADPEVCEIITKEKER-QFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR  156 (529)
Q Consensus        80 ~~~l~~~d~~~~~~~~~e~~~-~~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~  156 (529)
                      .+++...+...+.-+...... ....++|..+++  +.++.+++++......   .+|+.   ..|   ..++++.+.++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~---~~Y~~---~~G---~~~lr~~ia~~   74 (364)
T PRK07865          4 SARLPDFPWDTLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADA---PGYPT---TAG---TPELREAIVGW   74 (364)
T ss_pred             cccCCCccHHHHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhh---CCCCC---ccC---CHHHHHHHHHH
Confidence            445666666655554333322 235678876654  3467888888754321   12332   112   23555566688


Q ss_pred             HHHHcCCC-CCCCceeeecCChH-HHHHHHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC
Q 009673          157 ALAAFNLD-ENKWGVNVQPLSGS-PANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE  233 (529)
Q Consensus       157 la~~~g~~-~~~~~~~V~~~sGs-~A~~~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~  233 (529)
                      +.+.+|.+ .+.  -+|.+++|+ +++..++.++ ++|||+|++++|.|.++..        .+...|.  +++.++   
T Consensus        75 l~~~~~~~~~~~--~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~---  139 (364)
T PRK07865         75 LARRRGVTGLDP--AAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEV--------GARLAGA--TVVRAD---  139 (364)
T ss_pred             HHHHcCCCCCCc--ccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHH--------HHHhcCC--EEEecC---
Confidence            88877754 221  267789998 8887777777 7999999999998765421        2334454  555543   


Q ss_pred             CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-----
Q 009673          234 STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-----  303 (529)
Q Consensus       234 ~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-----  303 (529)
                           ++++++.    .++++|++++++||+  ..   ++++|.++|+++|++||+|++|. .+.+.+.....+.     
T Consensus       140 -----~~~~l~~----~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~  209 (364)
T PRK07865        140 -----SLTELGP----QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYL-ELGWDAEPVSILDPRVCG  209 (364)
T ss_pred             -----ChhhCCc----ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-hhccCCCCCccccccccC
Confidence                 2233322    378999998899997  33   46788889999999999999954 4443221111111     


Q ss_pred             ---cccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHH
Q 009673          304 ---YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK  378 (529)
Q Consensus       304 ---~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~  378 (529)
                         .-.++++|++|.+  +|.|+||+++++      ++.+.+...........+...+. ++..++..  ....++.++.
T Consensus       210 ~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~------~~~~~~~~~~~~~~~~~~~~~q~-~~~~~l~~--~~~~~~~~~~  280 (364)
T PRK07865        210 GDHTGLLAVHSLSKQSNLAGYRAGFVAGDP------ALVAELLEVRKHAGMMVPAPVQA-AMVAALGD--DAHVREQRER  280 (364)
T ss_pred             CccceEEEEeechhccCCCceeeEEEecCH------HHHHHHHHHHHhcCCCcCHHHHH-HHHHHhCC--HHHHHHHHHH
Confidence               1238889999986  799999999887      67666654322211222233222 22223322  1223566777


Q ss_pred             HHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCc
Q 009673          379 VVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMT  457 (529)
Q Consensus       379 i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~t  457 (529)
                      +.++++.+.+.|++.|+.+..+. .+.++|+.+.   .+..++.+.|.+.||.+..    |.. ++..++++||++..  
T Consensus       281 ~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~---~~~~~~~~~l~~~gv~v~p----g~~f~~~~~~~iRi~~~~--  350 (364)
T PRK07865        281 YARRRAVLRPALEAAGFRVDHSE-AGLYLWATRG---EDCWDTVAWLAERGILVAP----GDFYGPAGAQHVRVALTA--  350 (364)
T ss_pred             HHHHHHHHHHHHHHcCCcccCCC-ccEEEEEeCC---CCHHHHHHHHHHCCEEEeC----ccccCcCCCCEEEEEecC--
Confidence            88888999999988887765432 2455666652   2456677888899999954    332 12235789999642  


Q ss_pred             cCCCCHHHHHHHHHHHH
Q 009673          458 TRGFSEKEFVAIADFIH  474 (529)
Q Consensus       458 t~g~~~~d~~~la~~i~  474 (529)
                          +++++++.++.|+
T Consensus       351 ----~~~~~~~~~~~l~  363 (364)
T PRK07865        351 ----TDERIAAAVERLA  363 (364)
T ss_pred             ----CHHHHHHHHHHhh
Confidence                3688888888764

>PLN02672 methionine S-methyltransferase

Probab=99.89  E-value=2.6e-21  Score=218.92  Aligned_cols=332  Identities=13%  Similarity=0.106  Sum_probs=216.5

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhcc-CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-  178 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~-y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-  178 (529)
                      +.|.|..++|+  +|+.+++++...+... ++.|+|            ++.+..++++++.+|++.+.. -+|.+++|+ 
T Consensus       698 ~vI~LsinE~d~ppPp~V~eAi~eal~~~~~s~g~p------------dlr~aLa~~la~~~Gv~~d~~-e~IIvt~Gs~  764 (1082)
T PLN02672        698 SLIHMDVDESFLPVPSAVKASIFESFVRQNISESET------------DPRPSILQFIKSNYGFPTDSC-TEFVYGDTSL  764 (1082)
T ss_pred             CEEEEeCCCCCCCCCHHHHHHHHHHHhhcCCCCCCh------------HHHHHHHHHHHHHhCcCCCCC-CEEEEeCCHH
Confidence            56889888874  6899999998765321 111111            223455688999999986421 256678898 


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcEEEE
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIA  257 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pklIi~  257 (529)
                      +++..++.++++|||.|++++|.|+.+.        ..+...|.  +++.+++++ +++.+|+++++++++..+.++|++
T Consensus       765 elL~lll~aLl~pGD~VLVp~PtY~~Y~--------~~a~~~Ga--~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L  834 (1082)
T PLN02672        765 ALFNKLVLCCVQEGGTLCFPAGSNGTYV--------SAAKFLKA--NFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYI  834 (1082)
T ss_pred             HHHHHHHHHHcCCCCEEEEeCCChHHHH--------HHHHHcCC--EEEEEecccccCCCCCHHHHHHHhccCCCCEEEE
Confidence            7777888999999999999999776543        23455665  666777764 358999999999986533456777


Q ss_pred             cCCC-CCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccC--CCC-------Cc-----ccEEEecccccc-
Q 009673          258 GASA-YPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPF-------KY-----CDVVTTTTHKSL-  316 (529)
Q Consensus       258 ~~s~-~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~-------~~-----aDiv~~S~hK~l-  316 (529)
                      ++|+ ||+  ..   .+++|.++|++||++||+|++ |.++.+.+...  .++       ..     .-++++|++|.+ 
T Consensus       835 ~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEa-YsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~  913 (1082)
T PLN02672        835 SGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTS-FSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELL  913 (1082)
T ss_pred             ECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCC-CCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhc
Confidence            7776 887  33   577888899999999999999 44555433110  011       01     126778999864 


Q ss_pred             -cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh--cCc----hHHHHHHHHHHHHHHHHHH
Q 009673          317 -RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA--QSP----EFKVYQNKVVSNCRALASR  389 (529)
Q Consensus       317 -~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~--~~~----~~~~~~~~i~~~a~~l~~~  389 (529)
                       +|+|.||++++++     ++.+.+....  ...+.....+.++.+ ++...  ...    ..+++++.+.++++.+.+.
T Consensus       914 lpGLRIGylIap~~-----eLi~~l~~~~--~~s~~~~~~q~Aaaa-alall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~  985 (1082)
T PLN02672        914 SGGHEFGFLALNDS-----VLIDAFHSAP--GLSRPHSTLKYTIKK-LLGLKNQKSSDLLDGVAEQKKILKSRAERLKET  985 (1082)
T ss_pred             cHHHHheeEEeCCH-----HHHHHHHHhh--hhcCCCcHHHHHHHH-HHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence             8999999999763     4777665421  111111222333221 22111  111    2356667789999999999


Q ss_pred             HHhcCcEEecCCCCCceEEEccCC----------------CCCcHHHHHH-hHhcCCeEEcCCCCCCCCCCCCCCeEEEc
Q 009673          390 LVELGYKLVSGGSDNHLVLVDLRP----------------MGIDGARVEK-ILDMASITLNKNSVPGDKSALVPGGIRIG  452 (529)
Q Consensus       390 L~~~G~~v~~~gt~~~~~~v~~~~----------------~~i~~~~~~~-~L~~~GI~v~~~~~Pg~~~~~~~~~iRig  452 (529)
                      |.+.|+.+..+ ..++++|+++..                .+.+..++.+ +++++||.+.+    |... ..++++||+
T Consensus       986 L~~~Gi~v~~P-eGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~P----Gs~F-G~~g~~RIs 1059 (1082)
T PLN02672        986 LEACGWDVLEP-QGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINS----SSWT-GIPGYCRFS 1059 (1082)
T ss_pred             HHHCCCeEecC-CcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEec----Cccc-CCCCeEEEE
Confidence            99989887654 235666766531                0235555555 45678999954    4221 125789998


Q ss_pred             cCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          453 SPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       453 ~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +.      .+++++++..+.|++.+.
T Consensus      1060 fa------~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672       1060 FA------LEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred             ec------CCHHHHHHHHHHHHHHHH
Confidence            63      357899998888877554

>PLN02955 8-amino-7-oxononanoate synthase

Probab=99.89  E-value=3.2e-21  Score=202.23  Aligned_cols=327  Identities=16%  Similarity=0.156  Sum_probs=222.5

Q ss_pred             eeEecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHH
Q 009673          105 LELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP  179 (529)
Q Consensus       105 i~L~asen~~----~~~V~eal~~~l~~~y~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~  179 (529)
                      +....|.+|+    .|+++++....+ .+|..|..++|...|+ .+..++|    +.+++++|.+..     +..+||..
T Consensus       104 ~l~FsSndYLGL~~~p~v~~a~~~ai-~~yG~g~~gSrl~~G~~~~h~~LE----~~LA~f~g~e~a-----ll~sSGy~  173 (476)
T PLN02955        104 LLLFSGNDYLGLSSHPTISNAAANAA-KEYGMGPKGSALICGYTTYHRLLE----SSLADLKKKEDC-----LVCPTGFA  173 (476)
T ss_pred             EEEeeccCccCCCCCHHHHHHHHHHH-HHcCCCCCCcCccccChHHHHHHH----HHHHHHHCCCcE-----EEECChHH
Confidence            3445688875    789999988776 6788888888877765 5566777    778999999872     55799999


Q ss_pred             HHHHHHHhhc--------------CCCCEEEEcCCCCCccccccccccccccccccc--eEEEEEcccCCCCCCCCHHHH
Q 009673          180 ANFEVYTAIL--------------KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI--YFESMPYRLDESTGLVDYDML  243 (529)
Q Consensus       180 A~~~~l~all--------------~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~--~~~~v~~~v~~~~~~iD~d~l  243 (529)
                      ||..++.+|+              +.+|.|+.....|.+.+. |       +..+..  ..+++.|+      ..|+|+|
T Consensus       174 AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~d-G-------~~ls~~~~~a~~~~f~------HND~~~L  239 (476)
T PLN02955        174 ANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIID-G-------VRLAERQGNVEVFVYR------HCDMYHL  239 (476)
T ss_pred             HHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHH-H-------HHhccccCCceEEEeC------CCCHHHH
Confidence            9999998873              456777776666644321 1       222210  12444544      4589999


Q ss_pred             HHHhhhcC--CcEEEEc--CCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccc---cccC-CCC-CcccEEEecccc
Q 009673          244 EKTAILFR--PKLIIAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVVA-DPF-KYCDVVTTTTHK  314 (529)
Q Consensus       244 e~~i~~~~--pklIi~~--~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~---~~~~-~~~-~~aDiv~~S~hK  314 (529)
                      +++++..+  .++|++.  ++..+...|+++|.++|++||++||+|+||..|.+..   |... ..+ +..|++++|++|
T Consensus       240 e~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsK  319 (476)
T PLN02955        240 NSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSK  319 (476)
T ss_pred             HHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCcc
Confidence            98886532  3455554  4555568899999999999999999999999887644   1111 111 246899999999


Q ss_pred             cccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCCh-HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc
Q 009673          315 SLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPH-NHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL  393 (529)
Q Consensus       315 ~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~-~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~  393 (529)
                      .+ |.+||++++++      ++.+.++...-+++.++.. ....++..++++.+...  +..++++.+|.+++.+.   .
T Consensus       320 A~-G~~GGfi~gs~------~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~---~  387 (476)
T PLN02955        320 AA-GCHGGFIACSK------KWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKAL---S  387 (476)
T ss_pred             ch-hccCceeecHH------HHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHh---c
Confidence            97 78899999988      6777666433344444433 33344444567665433  34667888888888773   3


Q ss_pred             CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673          394 GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI  473 (529)
Q Consensus       394 G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i  473 (529)
                      |+.+     .++++.+-+... .....+.+.|.+.||.|+....|-  .|.+..++||++.+    .++++|++++++.|
T Consensus       388 G~~~-----~sPI~pI~ig~~-~~a~~~~~~L~~~Gi~v~~i~yPt--VP~g~~rLRi~lsA----~Ht~edId~lv~~L  455 (476)
T PLN02955        388 GVDI-----SSPIISLVVGNQ-EKALKASRYLLKSGFHVMAIRPPT--VPPNSCRLRVTLSA----AHTTEDVKKLITAL  455 (476)
T ss_pred             CCCC-----CCCEEEEEeCCH-HHHHHHHHHHHHCCCEEEEECCCC--CCCCCceEEEeeCC----CCCHHHHHHHHHHH
Confidence            6653     145554444321 133557888989999997654442  23445689998765    46799999999999


Q ss_pred             HHHHHH
Q 009673          474 HEGVEI  479 (529)
Q Consensus       474 ~~~~~~  479 (529)
                      .++...
T Consensus       456 ~~~~~~  461 (476)
T PLN02955        456 SSCLDF  461 (476)
T ss_pred             HHHHhh
Confidence            887653

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=99.89  E-value=3.4e-21  Score=204.81  Aligned_cols=345  Identities=15%  Similarity=0.158  Sum_probs=216.6

Q ss_pred             cceeEecCCCCC-cHHHHHHHhhhhhc-cCC-CC---CCCCCCCCCchhHHHHHHHHHHHHHHHcC----CCCCCCceee
Q 009673          103 KSLELIASENFT-SRAVMEAVGSCLTN-KYS-EG---LPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNV  172 (529)
Q Consensus       103 ~~i~L~asen~~-~~~V~eal~~~l~~-~y~-~G---~p~~r~~~g~~~~d~lE~~a~~~la~~~g----~~~~~~~~~V  172 (529)
                      ..|+|.-.||.+ ...+.+.+...... .+. .+   ....-+|.+......+.+...+++.+.+|    ++++    +|
T Consensus        48 g~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~----~I  123 (447)
T PLN02607         48 GVIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPD----RI  123 (447)
T ss_pred             ceEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHH----He
Confidence            358999999975 44455555443210 000 00   00112333333345666666678877776    3443    56


Q ss_pred             ecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccc-cccceEEEEEcccCCC-CCCCCHHHHHHHhhh
Q 009673          173 QPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDES-TGLVDYDMLEKTAIL  249 (529)
Q Consensus       173 ~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~-~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~  249 (529)
                      .+++|+ +|+.+++.++++|||.|++++|.|+++..        .+. ..|.  ++++++++.+ ++.+|+++++++++.
T Consensus       124 vit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~--------~~~~~~g~--~vv~v~~~~~~~f~~~~~~le~a~~~  193 (447)
T PLN02607        124 VLTAGATAANELLTFILADPGDALLVPTPYYPGFDR--------DLRWRTGV--KIVPIHCDSSNNFQVTPQALEAAYQE  193 (447)
T ss_pred             EEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCCc--EEEEEeCCCCCCCcCCHHHHHHHHHH
Confidence            678987 89988989999999999999998876532        122 2343  6677777643 467999999998864


Q ss_pred             -----cCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccc-cCCCC------C--c-cc--E
Q 009673          250 -----FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF------K--Y-CD--V  307 (529)
Q Consensus       250 -----~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~~------~--~-aD--i  307 (529)
                           .++|+|++++|+||+  ..   .+++|.++|++||+++|+|++ |.+.++.+. ..+..      .  . .+  +
T Consensus       194 a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEi-Ya~~~f~~~~f~S~~s~~~~~~~~~~~~~v~  272 (447)
T PLN02607        194 AEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEI-YSGSVFSASEFVSVAEIVEARGYKGVAERVH  272 (447)
T ss_pred             HHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEecc-ccccccCCCCcccHHHHHhhcCCCCCcCcEE
Confidence                 378999999999997  33   477888999999999999998 444443321 11100      0  0 12  6


Q ss_pred             EEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh--cCchHHHHHHHHHHHH
Q 009673          308 VTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA--QSPEFKVYQNKVVSNC  383 (529)
Q Consensus       308 v~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~--~~~~~~~~~~~i~~~a  383 (529)
                      ++.|++|.|  +|.|.|+++...+     ++...+......  .+.++..+. +++..|..-  ......+.++++.+++
T Consensus       273 vi~s~SK~fg~~GlRvG~ivs~n~-----~l~~~~~~~~~~--~~~s~~~q~-~~~~~L~d~~~~~~~l~~~r~~l~~~~  344 (447)
T PLN02607        273 IVYSLSKDLGLPGFRVGTIYSYND-----KVVTTARRMSSF--TLVSSQTQH-LLASMLSDEEFTENYIRTNRERLRKRY  344 (447)
T ss_pred             EEEcchhcCCCCcceEEEEEEcCH-----HHHHHHHHHhhc--CCCCHHHHH-HHHHHhCCchhHHHHHHHHHHHHHHHH
Confidence            779999986  7899999998542     565555433211  111222222 222223210  0011245566677788


Q ss_pred             HHHHHHHHhcCcEEecCCCCCceEEEccCCC---C-CcH-HHH-HHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCC
Q 009673          384 RALASRLVELGYKLVSGGSDNHLVLVDLRPM---G-IDG-ARV-EKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAM  456 (529)
Q Consensus       384 ~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~---~-i~~-~~~-~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~  456 (529)
                      +.+.+.|++.|+++..+ ....++|++++..   . .+. .++ .++++++||.+.    ||.. ....++++||++.. 
T Consensus       345 ~~~~~~L~~~gi~~~~~-~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~----pG~~f~~~~~g~fRi~fa~-  418 (447)
T PLN02607        345 EMIVQGLRRAGIECLKG-NAGLFCWMNLSPLLETPTREGELALWDSILREVKLNIS----PGSSCHCSEPGWFRVCFAN-  418 (447)
T ss_pred             HHHHHHHHhCCCCcccC-CeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEc----CccccCCCCCCEEEEEecc-
Confidence            88999999888876553 3356788888531   0 111 234 355677899994    5544 22357899998643 


Q ss_pred             ccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          457 TTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       457 tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                          +.++++++..++|.+++...
T Consensus       419 ----~~~~~l~~gl~Ri~~~l~~~  438 (447)
T PLN02607        419 ----MSEDTLEVALKRIHRFMDRR  438 (447)
T ss_pred             ----CCHHHHHHHHHHHHHHHHHH
Confidence                35799999999999888644

>PRK02769 histidine decarboxylase; Provisional

Probab=99.89  E-value=2e-20  Score=194.33  Aligned_cols=316  Identities=16%  Similarity=0.115  Sum_probs=211.8

Q ss_pred             HHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCC-CceeeecCChHHHHHHHHHhh--cCCC
Q 009673          116 RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENK-WGVNVQPLSGSPANFEVYTAI--LKPH  192 (529)
Q Consensus       116 ~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~-~~~~V~~~sGs~A~~~~l~al--l~pG  192 (529)
                      ...++.+...+.+.+  |.|...+..|.. ..++|+.+++++++++|+++++ |+  +.+++||++|..++.+.  ..|+
T Consensus        36 ~~~~~~~~~~~~~n~--gnp~~~~~~g~~-~~~~e~~~~~~~a~l~g~~~~~~~G--~~TsGgTean~~a~~~ar~~~~~  110 (380)
T PRK02769         36 YSALKRFFSFSINNC--GDPYSKSNYPLN-SFDFERDVMNFFAELFKIPFNESWG--YITNGGTEGNLYGCYLARELFPD  110 (380)
T ss_pred             HHHHHHHHHhhhccC--CCccccCCCCCC-hHHHHHHHHHHHHHHhCCCCCCCCE--EEecChHHHHHHHHHHHHHhCCC
Confidence            455555555554544  455443322222 4568888999999999998654 32  23344569988776544  3688


Q ss_pred             CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCC--CCCCH
Q 009673          193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYP--RDFDY  268 (529)
Q Consensus       193 D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~p--~~~d~  268 (529)
                      ++|++++.+|.+..        +.....|....  .++++ +++.+|+++|++.+++.  +|.+|+++..++.  ...|+
T Consensus       111 ~~ii~s~~~H~Sv~--------ka~~~lg~~~~--~V~~~-~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi  179 (380)
T PRK02769        111 GTLYYSKDTHYSVS--------KIARLLRIKSR--VITSL-PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNI  179 (380)
T ss_pred             cEEEeCCCceehHH--------HHHHHcCCCCc--eeccC-CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCH
Confidence            99999888776543        23334454333  34455 36889999999999873  3888877754433  48899


Q ss_pred             HHHHHHHHHhC---CEEEEecccccccccccccCCCCC---cccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhc
Q 009673          269 PRMRQIADAVG---ALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN  341 (529)
Q Consensus       269 ~~i~~ia~~~g---~~livD~ah~~Gli~~~~~~~~~~---~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~  341 (529)
                      ++|+++|+++|   +|+++|+||+.+.++......+++   ++|.++.|+||++.+|.| |+++++++      ..+.+.
T Consensus       180 ~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~------~~~~~~  253 (380)
T PRK02769        180 KEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKK------YVERIS  253 (380)
T ss_pred             HHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCCcEEEEEehh------hhhhcc
Confidence            99999999998   699999998877664321111222   699999999999988998 99999983      333321


Q ss_pred             c------cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCC
Q 009673          342 N------AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMG  415 (529)
Q Consensus       342 ~------~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~  415 (529)
                      .      .....+.|+++...+++++.+|+.+...++++..++..++++++.+.|++.|++++...   ...++.++.. 
T Consensus       254 ~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p---~~~~v~f~~~-  329 (380)
T PRK02769        254 VDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWRNP---NSITVVFPCP-  329 (380)
T ss_pred             cCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCC---CceEEEEcCC-
Confidence            1      01123467877778889999999888888999999999999999999999999987532   2233334322 


Q ss_pred             CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          416 IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       416 i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                       + +.+   .  .|..++.          .++.+||.+..-    .+.+.++.+.+-+.+.+.
T Consensus       330 -~-~~~---~--~~w~l~~----------~~~~~hi~~~~~----~~~~~~~~f~~dl~~~~~  371 (380)
T PRK02769        330 -S-ERI---W--KKWHLAT----------SGNQAHIITMPH----HNKQQIDSLIDELIFDLK  371 (380)
T ss_pred             -C-HHH---H--hCeeEcc----------cCCEEEEEECCC----CCHHHHHHHHHHHHHHHh
Confidence             1 222   1  4555532          134788865332    345777777766665554

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=99.89  E-value=9.2e-22  Score=202.73  Aligned_cols=281  Identities=17%  Similarity=0.103  Sum_probs=191.6

Q ss_pred             hhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHHHHhhcC------------CC--CEEEEcCCCCCccccc
Q 009673          144 EYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAILK------------PH--DRIMGLDLPHGGHLSH  208 (529)
Q Consensus       144 ~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs~A~~~~l~all~------------pG--D~Vl~~~~~~~g~~s~  208 (529)
                      +...++|+.+++++++++|.+ .+..  .+.+++|++||+.++.++..            +|  +.|+++++.|.++.  
T Consensus        34 ~~~~~le~~~~~~~~~~~g~~~~~~~--~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~--  109 (345)
T cd06450          34 PAATEMEAEVVNWLAKLFGLPSEDAD--GVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVE--  109 (345)
T ss_pred             chhHHHHHHHHHHHHHHhCCCCCCCC--EEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHH--
Confidence            456789999999999999997 2221  24456667999998888742            33  37777776665432  


Q ss_pred             cccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCE
Q 009673          209 GFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASAYPR--DFDYPRMRQIADAVGAL  281 (529)
Q Consensus       209 g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-----~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~  281 (529)
                            +.+...|.  +++.+++++ ++.+|+++|++.+++.     ++++|+++.+++++  ..|+++|.++|+++|++
T Consensus       110 ------~~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~  180 (345)
T cd06450         110 ------KAAAYLDV--KVRLVPVDE-DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLW  180 (345)
T ss_pred             ------HHHHHHhc--CeEEeeeCC-CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCe
Confidence                  12233344  666666663 4689999999998752     57788777666554  78999999999999999


Q ss_pred             EEEecccccccccccccC---CCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHH
Q 009673          282 LMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTI  357 (529)
Q Consensus       282 livD~ah~~Gli~~~~~~---~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~i  357 (529)
                      +++|++|..+........   ..+.++|++++|+||++.+|.+ |+++.+                             +
T Consensus       181 l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~-----------------------------~  231 (345)
T cd06450         181 LHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR-----------------------------A  231 (345)
T ss_pred             EEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH-----------------------------H
Confidence            999999877764322111   1123689999999999877665 765432                             2


Q ss_pred             HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEEEccCCC---CCcHHHHHHhHhcCCeEEc
Q 009673          358 GGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPM---GIDGARVEKILDMASITLN  433 (529)
Q Consensus       358 aala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~---~i~~~~~~~~L~~~GI~v~  433 (529)
                      .++..+++.+...++++..++..++++++.+.|.+. |+.++.+. +..++.+.+.+.   +++..++.+.|.+.|+.+.
T Consensus       232 ~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~  310 (345)
T cd06450         232 LKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEP-NLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHV  310 (345)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-ceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEE
Confidence            333445555545667888899999999999999884 78776532 344555555432   3455678888888865442


Q ss_pred             CCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          434 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       434 ~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      ..    .... .++.+|+++....   .+++|++++++.|++
T Consensus       311 ~~----~~~~-~~~~lRis~~~~~---~t~~di~~l~~~l~~  344 (345)
T cd06450         311 PA----TTLG-GPNVLRFVVTNPL---TTRDDADALLEDIER  344 (345)
T ss_pred             Ee----eEEC-CeEEEEEEecCCC---CCHHHHHHHHHHHHh
Confidence            21    1101 3568999986542   258999999998875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>PRK07568 aspartate aminotransferase; Provisional

Probab=99.89  E-value=1.7e-20  Score=197.32  Aligned_cols=335  Identities=17%  Similarity=0.173  Sum_probs=207.4

Q ss_pred             cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC--CCCCCCceeeecCChH
Q 009673          103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSGS  178 (529)
Q Consensus       103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g--~~~~~~~~~V~~~sGs  178 (529)
                      +.++|..+++  .+++.+.+++......  ..+|+.   ..|   ..++++...+++. ..|  ++++    +|.+++|+
T Consensus        31 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~Y~~---~~g---~~~lr~~ia~~~~-~~~~~~~~~----~i~~t~G~   97 (397)
T PRK07568         31 KVYHLNIGQPDIKTPEVFFEAIKNYDEE--VLAYSH---SQG---IPELREAFAKYYK-KWGIDVEPD----EILITNGG   97 (397)
T ss_pred             CEEEecCCCCCCCCCHHHHHHHHHHhcC--CcCcCC---CCC---CHHHHHHHHHHHH-HhCCCCCcc----eEEEcCCh
Confidence            4577877665  3678888888754321  112322   112   2344444444444 233  3443    45567776


Q ss_pred             -HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCC-CC-CCHHHHHHHhhhcCCcEE
Q 009673          179 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GL-VDYDMLEKTAILFRPKLI  255 (529)
Q Consensus       179 -~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~-~~-iD~d~le~~i~~~~pklI  255 (529)
                       +|+..++.++++|||+|++++|.|..+..        .....|.  ++++++++.++ +. .|++++++.+++ ++++|
T Consensus        98 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~g~~~~~~~~l~~~~~~-~~~~v  166 (397)
T PRK07568         98 SEAILFAMMAICDPGDEILVPEPFYANYNG--------FATSAGV--KIVPVTTKIEEGFHLPSKEEIEKLITP-KTKAI  166 (397)
T ss_pred             HHHHHHHHHHhcCCCCEEEEecCCCccHHH--------HHHHcCC--EEEEeecCcccCCCCCCHHHHHHhcCc-cceEE
Confidence             89998999999999999999987654321        1233454  55666665333 33 468999999877 88999


Q ss_pred             EEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccc-cCCCCC--c-cc--EEEecccccc--cCCCCe
Q 009673          256 IAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK--Y-CD--VVTTTTHKSL--RGPRGG  322 (529)
Q Consensus       256 i~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~~~--~-aD--iv~~S~hK~l--~GprgG  322 (529)
                      ++++|+||+  ..   ++++|.++|+++|+++++|++ |.++.+.+. .++...  . .+  +++.|+||++  +|.|.|
T Consensus       167 ~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~-y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G  245 (397)
T PRK07568        167 LISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEV-YREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIG  245 (397)
T ss_pred             EEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEecc-chhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceE
Confidence            888888887  33   578999999999999999998 445544332 112111  1 22  7889999987  588999


Q ss_pred             EEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCC
Q 009673          323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG  401 (529)
Q Consensus       323 ~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~g  401 (529)
                      |++++++     ++.+.+....... .+.+...+.+ ++.+++.. ...+++..+.+.++++.+.+.|.+. |+.+..+ 
T Consensus       246 ~~~~~~~-----~~~~~~~~~~~~~-~~~s~~~q~~-~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p-  316 (397)
T PRK07568        246 CLISKNK-----ELIAAAMKLCQAR-LSPPTLEQIG-AAALLDTP-ESYFDEVREEYKKRRDILYEELNKIPGVVCEKP-  316 (397)
T ss_pred             EEecCCH-----HHHHHHHHHhhcc-CCCCcHHHHH-HHHHhhCC-HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC-
Confidence            9998642     5655543322111 2333333333 33345421 1234666777888899999999874 6665543 


Q ss_pred             CCCceEEEccCCCCCcHHHHHHhH-hc-----CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          402 SDNHLVLVDLRPMGIDGARVEKIL-DM-----ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       402 t~~~~~~v~~~~~~i~~~~~~~~L-~~-----~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      ..++++|+++..  .+..++.+.| ++     .||.+.++...+......+++|||++.      .+++++++..+.|.+
T Consensus       317 ~g~~~~~~~l~~--~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~------~~~~~~~~~~~~l~~  388 (397)
T PRK07568        317 KGAFYIIAKLPV--DDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV------LNEEDLKRAMEILKE  388 (397)
T ss_pred             CcceEEEEecCC--CCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe------CCHHHHHHHHHHHHH
Confidence            234556777753  2455565555 33     699984432111111123468999963      346899999999988


Q ss_pred             HHHH
Q 009673          476 GVEI  479 (529)
Q Consensus       476 ~~~~  479 (529)
                      +++.
T Consensus       389 ~l~~  392 (397)
T PRK07568        389 ALEK  392 (397)
T ss_pred             HHHH
Confidence            7764

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=99.89  E-value=6.5e-22  Score=204.64  Aligned_cols=277  Identities=17%  Similarity=0.134  Sum_probs=186.5

Q ss_pred             HHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCC-CEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673          154 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL  231 (529)
Q Consensus       154 ~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v  231 (529)
                      ++++++.+|++++    +|.+++|+ +++..++.++++|| |+|++++|.|+.+        ...+...|.  +++.+++
T Consensus        63 ~~~~a~~~g~~~~----~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y--------~~~~~~~G~--~~~~v~~  128 (351)
T PRK01688         63 IENYAAYAGVKPE----QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMY--------SVSAETIGV--EIRTVPT  128 (351)
T ss_pred             HHHHHHHhCCCHH----HEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHH--------HHHHHHcCC--EEEEeec
Confidence            4778889999885    56779998 89999999999997 9999999876432        112344565  6666666


Q ss_pred             CCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHh--CCEEEEecccccccccccccCCCCC-ccc
Q 009673          232 DESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK-YCD  306 (529)
Q Consensus       232 ~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~~-~aD  306 (529)
                      + +++.+|++++++.+ + ++++|++++|+||+  ..+.+++.++++..  +++||+|+++. .+.........+. +..
T Consensus       129 ~-~~~~~d~~~l~~~~-~-~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~-~f~~~~s~~~~~~~~~n  204 (351)
T PRK01688        129 L-DNWQLDLPAIADNL-D-GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYI-EFCPQASLAGWLAEYPH  204 (351)
T ss_pred             C-CCCCCCHHHHHHhc-c-CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchh-hcCCCCChHHHHhhCCC
Confidence            5 35889999999887 4 79999999999997  66777766666532  68999999953 3321110000011 222


Q ss_pred             -EEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673          307 -VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC  383 (529)
Q Consensus       307 -iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a  383 (529)
                       +++.|+||++  +|.|.||+++++      ++.+.+.+...+...+  ...+.+| ..+|.....+.+++..+++.+++
T Consensus       205 ~iv~rSfSK~~glaGlRiGy~i~~~------~~i~~l~~~~~~~~v~--~~~~~~a-~~~L~~~~~~~~~~~~~~~~~~r  275 (351)
T PRK01688        205 LVILRTLSKAFALAGLRCGFTLANE------EVINLLLKVIAPYPLS--TPVADIA-AQALSPQGIAAMRERVAEINANR  275 (351)
T ss_pred             EEEEecchHhhcCHHHHHhHHhCCH------HHHHHHHhccCCCCCC--HHHHHHH-HHHHhcchHHHHHHHHHHHHHHH
Confidence             7889999986  688999999987      6777776654443211  2222222 22343210123466677888889


Q ss_pred             HHHHHHHHhc-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCC
Q 009673          384 RALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS  462 (529)
Q Consensus       384 ~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~  462 (529)
                      +++.+.|.+. |+..+.+ +..+++++++.    +.+++.+.|.++||.|....    ..+..++++||++.       +
T Consensus       276 ~~l~~~L~~~~~~~~~~p-s~~nfi~~~~~----~~~~l~~~L~~~gi~vr~~~----~~~~~~~~iRis~~-------~  339 (351)
T PRK01688        276 QWLIAALKEIPCVEQVFD-SETNYILARFT----ASSAVFKSLWDQGIILRDQN----KQPGLSNCLRITIG-------T  339 (351)
T ss_pred             HHHHHHHHhCCCCCeECC-CCCcEEEEEcC----CHHHHHHHHHHCCeEEEECC----CcCCCCCeEEEeCC-------C
Confidence            9999999885 6643333 23566777764    45778888888999996432    11113578999864       3


Q ss_pred             HHHHHHHHHHH
Q 009673          463 EKEFVAIADFI  473 (529)
Q Consensus       463 ~~d~~~la~~i  473 (529)
                      ++|++++.+.|
T Consensus       340 ~~e~~~l~~al  350 (351)
T PRK01688        340 REECQRVIDAL  350 (351)
T ss_pred             HHHHHHHHHhh
Confidence            69999998876

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.89  E-value=8.7e-21  Score=215.06  Aligned_cols=353  Identities=18%  Similarity=0.163  Sum_probs=227.8

Q ss_pred             cceeEec-CCCCCcH-HHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIA-SENFTSR-AVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~a-sen~~~~-~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.+.|.. +-.++++ .|.+++...+.+.+  ++|...+..+....+.++ .+++.+++++|++++++  .|..|+|+ +
T Consensus        34 ~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~--~np~s~~~~s~~~~~~~e-~aR~~ia~~lga~~~~~--~VvFtsnaT~  108 (805)
T PLN02724         34 GVVYLDHAGATLYSESQLEAALADFSSNVY--GNPHSQSDSSMRSSDTIE-SARQQVLEYFNAPPSDY--ACVFTSGATA  108 (805)
T ss_pred             CCEeEeCCCCCCCCHHHHHHHHHHHHhhcc--CCCCcCcchhhhHHHHHH-HHHHHHHHHhCCCccce--EEEEeCChHH
Confidence            4566653 4455555 55555544444333  344433333444455555 68899999999986542  34456655 8


Q ss_pred             HHHHHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-------CCCCCCH--HHHHHHhh-
Q 009673          180 ANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-------STGLVDY--DMLEKTAI-  248 (529)
Q Consensus       180 A~~~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-------~~~~iD~--d~le~~i~-  248 (529)
                      |+..+..++ +++||+|++...+|.+.+....     .....|.  ++..++++.       +.+.+|.  ++|++.++ 
T Consensus       109 alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~-----~a~~~G~--~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~  181 (805)
T PLN02724        109 ALKLVGETFPWSSESHFCYTLENHNSVLGIRE-----YALEKGA--AAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTS  181 (805)
T ss_pred             HHHHHHHHCCCCCCCeEEEeeccccchHHHHH-----HHHHcCC--eEEeccchhccccccccccccccchhhhhhhhhh
Confidence            988888887 7899999998888877653211     1112344  444444431       1234443  66766542 


Q ss_pred             --------hcCCcEEEEcC-CC-CCCCCCHHHHHHHHHHh--------CCEEEEecccccccccccccCCCCCcccEEEe
Q 009673          249 --------LFRPKLIIAGA-SA-YPRDFDYPRMRQIADAV--------GALLMMDMAHISGLVAASVVADPFKYCDVVTT  310 (529)
Q Consensus       249 --------~~~pklIi~~~-s~-~p~~~d~~~i~~ia~~~--------g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~  310 (529)
                              ..++++|++.+ +| .+...|++.|..+++..        ++++++|+||+.|.+..++...   ++|++++
T Consensus       182 ~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~---~~Dfl~~  258 (805)
T PLN02724        182 KLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRY---PADFVVV  258 (805)
T ss_pred             hhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhc---CCCEEEE
Confidence                    12567888874 33 33488999876655532        3579999999999876554322   5899999


Q ss_pred             cccccccCCCC-eEEEeeCCCcchhHHHhhhccccc-----------------------CCCCCCChHHHHHHHHHHHHH
Q 009673          311 TTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVF-----------------------PGLQGGPHNHTIGGLAVCLKH  366 (529)
Q Consensus       311 S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~-----------------------p~~~g~p~~~~iaala~al~~  366 (529)
                      |+|||++||.| |+++++++      +.+.+....+                       ....|+++...++++..|++.
T Consensus       259 S~HK~~GgP~G~G~L~vr~~------~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~  332 (805)
T PLN02724        259 SFYKIFGYPTGLGALLVRRD------AAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKL  332 (805)
T ss_pred             ecceeccCCCCceEEEEehh------hhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHH
Confidence            99999988998 99999883      3332221111                       123688999999999999998


Q ss_pred             hcCchHHHHHHHHHHHHHHHHHHHHhc-------CcEEecCC-------CCCceEEEccCC---CCCcHHHHHHhHhcCC
Q 009673          367 AQSPEFKVYQNKVVSNCRALASRLVEL-------GYKLVSGG-------SDNHLVLVDLRP---MGIDGARVEKILDMAS  429 (529)
Q Consensus       367 ~~~~~~~~~~~~i~~~a~~l~~~L~~~-------G~~v~~~g-------t~~~~~~v~~~~---~~i~~~~~~~~L~~~G  429 (529)
                      +...+++...++....++++.+.|.+.       ++.++.+.       ....++.+.+..   ..+...++.+++.+.|
T Consensus       333 l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~g  412 (805)
T PLN02724        333 LNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSG  412 (805)
T ss_pred             HHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcC
Confidence            876677888888889999999999874       36666432       011233333321   1133456777778899


Q ss_pred             eEEcCCCC--CCCC-C---------------------------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          430 ITLNKNSV--PGDK-S---------------------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       430 I~v~~~~~--Pg~~-~---------------------------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      |.++.+..  |+-. .                           ....+.+|+|+.+++|    ++|+++++++|++....
T Consensus       413 I~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt----~eDvd~lv~~l~~~~~~  488 (805)
T PLN02724        413 IQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMST----FEDCQKFIDFIISSFVS  488 (805)
T ss_pred             cEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCC----HHHHHHHHHHHHHHhhc
Confidence            99976542  2200 0                           0013779999998886    79999999999997754


Q ss_pred             H
Q 009673          480 T  480 (529)
Q Consensus       480 ~  480 (529)
                      .
T Consensus       489 ~  489 (805)
T PLN02724        489 T  489 (805)
T ss_pred             C
Confidence            3

>PRK06836 aspartate aminotransferase; Provisional

Probab=99.89  E-value=1.5e-20  Score=197.57  Aligned_cols=336  Identities=18%  Similarity=0.136  Sum_probs=210.4

Q ss_pred             ceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCChH-
Q 009673          104 SLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGS-  178 (529)
Q Consensus       104 ~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V~~~sGs-  178 (529)
                      .++|..+..  ++++.+.+++...+......   ..+ |+.......+++.+.+++.+.++.  +++    +|.+++|+ 
T Consensus        35 ~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~---~~~-y~~~~g~~~lr~~ia~~l~~~~~~~~~~~----~i~~t~G~~  106 (394)
T PRK06836         35 VFDFSLGNPSVPPPAAVKEALRELAEEEDPG---LHG-YMPNAGYPEVREAIAESLNRRFGTPLTAD----HIVMTCGAA  106 (394)
T ss_pred             eEEecCcCCCCCCCHHHHHHHHHHHhcCCcC---ccc-CCCCCCCHHHHHHHHHHHHHHhCCCCCcC----cEEEeCChH
Confidence            467765543  35788999987665432110   011 222223345555555666665554  343    45667776 


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      +++..++.++++|||.|++++|.+.++..        .....|.  +++.++++++++.+|++++++.+++ ++++|+++
T Consensus       107 ~al~~~~~~l~~~gd~Vli~~p~~~~~~~--------~~~~~g~--~v~~v~~~~~~~~~d~~~l~~~~~~-~~~~v~~~  175 (394)
T PRK06836        107 GALNVALKAILNPGDEVIVFAPYFVEYRF--------YVDNHGG--KLVVVPTDTDTFQPDLDALEAAITP-KTKAVIIN  175 (394)
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHcCC--EEEEEecCCccCcCCHHHHHhhcCc-CceEEEEe
Confidence            89999999999999999999987765421        2233454  6777777765678999999999977 89999998


Q ss_pred             CCCCCC--CCC---HHHHHHHHHH------hCCEEEEeccccccccccccc-CCCCC--cccEEEecccccc--cCCCCe
Q 009673          259 ASAYPR--DFD---YPRMRQIADA------VGALLMMDMAHISGLVAASVV-ADPFK--YCDVVTTTTHKSL--RGPRGG  322 (529)
Q Consensus       259 ~s~~p~--~~d---~~~i~~ia~~------~g~~livD~ah~~Gli~~~~~-~~~~~--~aDiv~~S~hK~l--~GprgG  322 (529)
                      +++||+  ..+   +++|.++|++      ||+++++|+++ ..+...+.. +..+.  ...++++|++|.+  +|.|.|
T Consensus       176 ~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG  254 (394)
T PRK06836        176 SPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPY-REIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIG  254 (394)
T ss_pred             CCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccc-cccccCCCCCCChHHccCcEEEEecchhhccCcceeeE
Confidence            889987  444   6677788888      89999999984 445443211 11111  2348889999987  588899


Q ss_pred             EEEeeCCCcchhHHHhhhcccc-cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCC
Q 009673          323 MIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG  401 (529)
Q Consensus       323 ~i~~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~g  401 (529)
                      |+++++.......+...+.... ..+....+.. ...+++..+.    ..  ...+.+.++++.+.+.|++.|+.+..+.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~q~~~~~~l~----~~--~~~~~~~~~r~~l~~~L~~~g~~~~~~~  327 (394)
T PRK06836        255 YIAVNPEMEDADDLVAALVFANRILGFVNAPAL-MQRVVAKCLD----AT--VDVSIYKRNRDLLYDGLTELGFECVKPQ  327 (394)
T ss_pred             EEecCHHHhhhHHHHHHHHHHhhccccccCCHH-HHHHHHHHhC----Ch--HHHHHHHHHHHHHHHHHHhCCCEeecCC
Confidence            9999863100000111111110 0011122222 2222222222    21  1245567778888899988888766542


Q ss_pred             CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          402 SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       402 t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                       .++++|+.+..  .+..++.+.|.++||.+.    ||.... .++++||++.      .+++++++..+.|+++++..
T Consensus       328 -gg~~~~~~~~~--~~~~~~~~~l~~~gv~v~----~g~~f~-~~~~iRi~~~------~~~~~~~~~i~~l~~~l~~~  392 (394)
T PRK06836        328 -GAFYLFPKSPE--EDDVAFCEKAKKHNLLLV----PGSGFG-CPGYFRLSYC------VDTETIERSLPAFEKLAKEY  392 (394)
T ss_pred             -ceEEEEEeCCC--CCHHHHHHHHHhCCEEEE----CchhcC-CCCeEEEEec------CCHHHHHHHHHHHHHHHHHh
Confidence             34566666543  356777788889999995    443311 2578999974      34799999999998888643

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=99.89  E-value=5.3e-21  Score=198.09  Aligned_cols=314  Identities=16%  Similarity=0.139  Sum_probs=206.1

Q ss_pred             ceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HH
Q 009673          104 SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA  180 (529)
Q Consensus       104 ~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A  180 (529)
                      .++|..++|+  +|+.+.+++...+..  ..+||.      .. ..+++    +.++++++++++    +|.+++|+ ++
T Consensus        21 ~~~l~~~~~~~~~p~~~~~a~~~~~~~--~~~Y~~------~~-~~~lr----~~ia~~~~~~~~----~i~it~Ga~~~   83 (354)
T PRK06358         21 ILDFSANINPLGVPESLKQAITENLDK--LVEYPD------PD-YLELR----KRIASFEQLDLE----NVILGNGATEL   83 (354)
T ss_pred             eEEecCCCCCCCCCHHHHHHHHHHHHh--hhcCCC------cc-HHHHH----HHHHHHhCCChh----hEEECCCHHHH
Confidence            5788877775  588999998876532  122332      11 23343    667777888875    56679998 88


Q ss_pred             HHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       181 ~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      +..++.++ .+ |.|++++|.|+.+.        ......|.  +++.++++.+ ++.+| +++.+.+.. ++++|+++.
T Consensus        84 l~~~~~~~-~~-~~v~i~~P~y~~~~--------~~~~~~g~--~~~~~~~~~~~~~~~d-~~~~~~~~~-~~~~v~~~~  149 (354)
T PRK06358         84 IFNIVKVT-KP-KKVLILAPTFAEYE--------RALKAFDA--EIEYAELTEETNFAAN-EIVLEEIKE-EIDLVFLCN  149 (354)
T ss_pred             HHHHHHHh-CC-CcEEEecCChHHHH--------HHHHHcCC--eeEEEeCccccCCCcc-HHHHHhhcc-CCCEEEEeC
Confidence            88888876 44 68889998775432        12234454  5666666543 46789 666666665 799998888


Q ss_pred             CCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC---Cccc--EEEecccccc--cCCCCeEEEee
Q 009673          260 SAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYCD--VVTTTTHKSL--RGPRGGMIFFK  327 (529)
Q Consensus       260 s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~~aD--iv~~S~hK~l--~GprgG~i~~~  327 (529)
                      |+||+  ..   .+++|.++|+++|+++|+|++ |..+...+....++   +..+  +++.|++|++  +|.|.||++++
T Consensus       150 P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~-Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~  228 (354)
T PRK06358        150 PNNPTGQLISKEEMKKILDKCEKRNIYLIIDEA-FMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTS  228 (354)
T ss_pred             CCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCc-ccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecC
Confidence            99997  34   477888889999999999998 44555433212211   1112  7889999986  79999999986


Q ss_pred             CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchH-HHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCc
Q 009673          328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNH  405 (529)
Q Consensus       328 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~  405 (529)
                      ++     .+.+.+.....+.  +.....+. +...++.   ...+ ++.++.+.++++.+.+.|++. |+.+..+.  ..
T Consensus       229 ~~-----~~~~~~~~~~~~~--~~~~~~q~-~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~--g~  295 (354)
T PRK06358        229 NK-----NLAEKLLQMREPW--SINTFADL-AGQTLLD---DKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPS--VN  295 (354)
T ss_pred             CH-----HHHHHHHHhCCCC--cchHHHHH-HHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCc--ce
Confidence            42     5666665443221  11122222 2222332   2233 667778888899999999874 77666542  34


Q ss_pred             eEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          406 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       406 ~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      ++|+.+..    ..++.+.|.++||.+..    |+. +...+++|||++.       +.++++++.+.+++++
T Consensus       296 f~~~~~~~----~~~~~~~l~~~gI~v~~----~~~f~~~~~~~iRls~~-------~~~~~~~l~~~l~~~~  353 (354)
T PRK06358        296 FIFFKLEK----PIDLRKELLKKGILIRS----CSNYRGLDENYYRVAVK-------SREDNKKLLKALEVIL  353 (354)
T ss_pred             EEEEEcCc----hHHHHHHHHHCCeEEEE----CCCCCCCCCCEEEEEeC-------CHHHHHHHHHHHHHHh
Confidence            67776642    35677777788999954    443 1223578999863       3699999999998765

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=99.89  E-value=9.2e-21  Score=196.54  Aligned_cols=313  Identities=16%  Similarity=0.139  Sum_probs=202.3

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.++|..++|+  +|+.+++++.+.+..  ..+||.    .|   ...+.    +.+++.++++++    +|.+++|+ +
T Consensus        31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~----~~---~~~lr----~~ia~~~~~~~~----~I~it~G~~~   93 (357)
T PRK14809         31 DLVKLSSNENPHGPSPAAVEAIREAAER--VHSYPK----AS---HADLT----AALADRWDVSPE----QVWLANGGDG   93 (357)
T ss_pred             ceeEecCCCCCCCCCHHHHHHHHHHHhh--hhcCCC----CC---HHHHH----HHHHHHhCCCcc----eEEECCCHHH
Confidence            56888888774  678899998776542  123432    11   22333    556677788875    56678888 8


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      ++..++.++++|||.|++++|.|..+.        ......|.  .++.++++. +++.+|.+++++.. + ++|+|+++
T Consensus        94 al~~~~~~~~~~gd~V~v~~P~y~~~~--------~~~~~~g~--~~~~~~l~~~~~~~~~~~~~~~~~-~-~~k~i~l~  161 (357)
T PRK14809         94 ALDYLARAMLDPGDTVLVPDPGFAYYG--------MSARYHHG--EVREYPVSKADDFEQTADTVLDAY-D-GERIVYLT  161 (357)
T ss_pred             HHHHHHHHhcCCCCEEEEeCCChHHHH--------HHHHHcCC--eEEEEecccCcCCCcCHHHHHHhh-c-CCcEEEEe
Confidence            999999999999999999998764221        12234454  444444543 34678888887765 2 68999999


Q ss_pred             CCCCCC--CCCHHHHHHHHHHh--CCEEEEecccccccccccccCCCCC-c-ccEEEecccccc--cCCCCeEEEeeCCC
Q 009673          259 ASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK-Y-CDVVTTTTHKSL--RGPRGGMIFFKKDP  330 (529)
Q Consensus       259 ~s~~p~--~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~~-~-aDiv~~S~hK~l--~GprgG~i~~~~~~  330 (529)
                      +|+||+  ..+.+++.++++..  +++||+|+++. .+...+.....++ . --+++.|++|++  +|+|.||+++++  
T Consensus       162 ~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~-~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~--  238 (357)
T PRK14809        162 SPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYG-EFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE--  238 (357)
T ss_pred             CCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhh-hccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCH--
Confidence            999997  67777777776654  78999999853 3432211000011 1 127789999987  699999999987  


Q ss_pred             cchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEE
Q 009673          331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV  409 (529)
Q Consensus       331 ~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v  409 (529)
                          ++.+++.+...+.  +.+...+.+++ .+|.   .++ +++..+.+.++++.+.+.|...++   .+  ...++|+
T Consensus       239 ----~~~~~~~~~~~~~--~~~~~~~~~a~-~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~---~~--~g~f~~~  303 (357)
T PRK14809        239 ----EWADAYARVNTPF--AASELACRAGL-AALD---DDEHVERTVETARWAREYIREELDAPTW---ES--AGNFVLA  303 (357)
T ss_pred             ----HHHHHHHHhCCCC--CCCHHHHHHHH-HHhC---CHHHHHHHHHHHHHHHHHHHHHhcCccC---CC--CCCEEEE
Confidence                6777776543222  22222222222 2332   223 356666777777778787754322   22  2456777


Q ss_pred             ccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          410 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       410 ~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ++.    +..++.+.|+++||.|..    |.... .+++|||++.       +.+++++..++|+++++
T Consensus       304 ~~~----~~~~~~~~l~~~gv~v~~----g~~f~-~~~~iRls~~-------~~~~~~~~l~~L~~~l~  356 (357)
T PRK14809        304 EVG----DASAVAEAAQERGVIVRD----CTSFG-LPECIRITCG-------TREETERAVEVLNEVLA  356 (357)
T ss_pred             ECC----CHHHHHHHHHHCCEEEEE----CccCC-CCCeEEEecC-------CHHHHHHHHHHHHHHhc
Confidence            663    456777888899999954    33211 2478999852       26899999998887653

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.89  E-value=5.1e-21  Score=199.25  Aligned_cols=320  Identities=13%  Similarity=0.120  Sum_probs=206.3

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCC
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP  191 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~p  191 (529)
                      ..+++.++++...+...+-        ++..+...++|    +++++++|.+.     .|.+.+|++|+..++.++ ++|
T Consensus         8 ~~~~~e~~a~~~~~~~~~~--------~~~g~~~~~~e----~~la~~~g~~~-----~v~~~sgt~aL~~~l~al~~~p   70 (376)
T TIGR02379         8 PVTGQELEYIAEAISEGKL--------SGDGPFSRRCE----TWLENRTGTKK-----ALLTPSCTAALEMAALLLDIQP   70 (376)
T ss_pred             CCCHHHHHHHHHHHHcCCc--------cCCcHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCC
Confidence            3566678888777755432        11124456666    67888888864     245577779999888888 899


Q ss_pred             CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHH
Q 009673          192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRM  271 (529)
Q Consensus       192 GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i  271 (529)
                      ||+|++++++|.+...        .+...|.  +++.++++++++.+|++++++.+++ ++|+|+.+++ ++...|+++|
T Consensus        71 Gd~Viv~~~t~~~~~~--------~~~~~G~--~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~~~-~G~~~d~~~I  138 (376)
T TIGR02379        71 GDEVIMPSYTFVSTAN--------AFVLRGA--KIVFVDIRPDTMNIDETLIESAITH-RTKAIVPVHY-AGVACDMDTI  138 (376)
T ss_pred             cCEEEECCCCcHHHHH--------HHHHcCC--EEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEeCC-CCCccCHHHH
Confidence            9999999987755421        2334454  7888888877788999999999987 8999986543 4567899999


Q ss_pred             HHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccc--cc-cCCCCeEEEeeCCCcchhHHHhhhcccccCCC
Q 009673          272 RQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHK--SL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGL  348 (529)
Q Consensus       272 ~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK--~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~  348 (529)
                      .++|+++|++||+|++|+.|....+.....  ..|+.++|+|+  .+ +|++||+++++++     ++.++++.....|.
T Consensus       139 ~~la~~~~i~vIeDaa~~~g~~~~~~~~g~--~~~~~~fSf~~~K~l~~g~~gG~v~~~~~-----~~~~~~~~~~~~g~  211 (376)
T TIGR02379       139 MALANKHQLFVIEDAAQGVMSTYKGRALGS--IGHLGTFSFHETKNYTSGGEGGALLINDQ-----AFIERAEIIREKGT  211 (376)
T ss_pred             HHHHHHCCCEEEEECccccCCccCCcccCC--CCCEEEEeCCCCCcCcccCCceEEEECCH-----HHHHHHHHHHHhCC
Confidence            999999999999999998876443321111  35788888875  44 5779999999864     55555432111000


Q ss_pred             -----------------CCC-ChHHHH-HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc---C-cEEe--cCCC-
Q 009673          349 -----------------QGG-PHNHTI-GGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL---G-YKLV--SGGS-  402 (529)
Q Consensus       349 -----------------~g~-p~~~~i-aala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~---G-~~v~--~~gt-  402 (529)
                                       .|. ..+..+ ||+.  +.++  ..+++..++.+++++.+.+.|.+.   + ..+.  .++. 
T Consensus       212 ~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g--~~qL--~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~  287 (376)
T TIGR02379       212 NRSQFFRGEVDKYTWRDIGSSYLPSELQAAYL--WAQL--EQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQ  287 (376)
T ss_pred             CCccccccCCCcceeeeecccCCccHHHHHHH--HHHH--HHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCe
Confidence                             111 111122 3322  2222  234566677777777788887653   2 2221  1121 


Q ss_pred             -CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCC----CC-------------CCeEEEccCCCccCCCCHH
Q 009673          403 -DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSA----LV-------------PGGIRIGSPAMTTRGFSEK  464 (529)
Q Consensus       403 -~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~----~~-------------~~~iRig~~~~tt~g~~~~  464 (529)
                       ..|++++.+.. +.+.+++.+.|.++||.++..+.|.+..+    +.             ...|.+  |..  .+++++
T Consensus       288 ~~~~~~~i~~~~-~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~L--P~~--~~l~~~  362 (376)
T TIGR02379       288 HNAHMFYIKLKD-EDDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRL--PLY--YGLSKE  362 (376)
T ss_pred             eeeEEEEEEECC-cCCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEc--cCC--CCCCHH
Confidence             11344454532 34678899999999999876555554311    10             112444  322  358899


Q ss_pred             HHHHHHHHHHHHH
Q 009673          465 EFVAIADFIHEGV  477 (529)
Q Consensus       465 d~~~la~~i~~~~  477 (529)
                      |++++++.|++++
T Consensus       363 ~~~~i~~~i~~~~  375 (376)
T TIGR02379       363 DQARVIQTICDYL  375 (376)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999998764

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>PRK05839 hypothetical protein; Provisional

Probab=99.89  E-value=9.6e-21  Score=197.61  Aligned_cols=325  Identities=14%  Similarity=0.116  Sum_probs=201.4

Q ss_pred             cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      ..++|..+++  .+++.+.+++..... . ...|+.      .....++.+...+++++.+|.+.+.  -+|.+++|+ +
T Consensus        25 ~~i~l~~~~p~~~~~~~~~~a~~~~~~-~-~~~Y~~------~~G~~~lr~aia~~l~~~~g~~~~~--~~I~it~G~~~   94 (374)
T PRK05839         25 KGLDLTIGEPQFETPKFIQDALKNNAH-L-LNKYPK------SAGEESLREAQRGFFKRRFKIELKE--NELIPTFGTRE   94 (374)
T ss_pred             CeEEcCCCCCCCCCCHHHHHHHHHHhh-c-cCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCc--ceEEEecCcHH
Confidence            4577877775  367888888876432 1 122332      1122355556668888888853221  367889998 7


Q ss_pred             HHHHHHHhhc--CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEE
Q 009673          180 ANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLII  256 (529)
Q Consensus       180 A~~~~l~all--~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi  256 (529)
                      |+..++.+++  ++||.|++++|.|..+..        .....|.  ++++++++++ ++.+|.++.+  + + ++|+|+
T Consensus        95 al~~~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~v~~v~~~~~~~~~~d~~~~~--~-~-~~k~v~  160 (374)
T PRK05839         95 VLFNFPQFVLFDKQNPTIAYPNPFYQIYEG--------AAIASRA--KVLLMPLTKENDFTPSLNEKE--L-Q-EVDLVI  160 (374)
T ss_pred             HHHHHHHHHhcCCCCCEEEECCCCchhhHH--------HHHhcCC--EEEEeecccccCCcCCcchhh--h-c-cccEEE
Confidence            8877777764  589999999987754421        2334554  7777777643 3667765442  2 3 689999


Q ss_pred             EcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC---------c-ccEEEeccccc--ccCC
Q 009673          257 AGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK---------Y-CDVVTTTTHKS--LRGP  319 (529)
Q Consensus       257 ~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~---------~-aDiv~~S~hK~--l~Gp  319 (529)
                      +++|+||+  ..   .+++|.++|+++|++||+|+++. .+...+..++.+.         + --+++.|++|.  ++|.
T Consensus       161 i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~-~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl  239 (374)
T PRK05839        161 LNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYS-EIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGL  239 (374)
T ss_pred             EeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchh-hcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccc
Confidence            99999997  33   46778888999999999999843 3332211111110         1 12788999997  4899


Q ss_pred             CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec
Q 009673          320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS  399 (529)
Q Consensus       320 rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~  399 (529)
                      |.||+++++      ++.+++.........+.+...+.++. .++.  .....++..+++.++++.+.+.|   |+. .+
T Consensus       240 RiG~ii~~~------~~~~~~~~~~~~~~~~~~~~~q~~~~-~~l~--~~~~~~~~~~~~~~~~~~~~~~l---~~~-~p  306 (374)
T PRK05839        240 RSGFIAGDA------SILKKYKAYRTYLGCASPLPLQKAAA-VAWL--DDEHAEFFRNIYAKNLKLAREIL---GIT-IP  306 (374)
T ss_pred             eeEEEecCH------HHHHHHHHHHhhcCCCCChHHHHHHH-HHhc--cchHHHHHHHHHHHHHHHHHHhc---CCC-CC
Confidence            999999986      67766654322111233333333332 2332  12233666777777777766654   443 22


Q ss_pred             CCCCCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          400 GGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       400 ~gt~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                        ..+.++|+++.    +..++.+.| +++||.|.++...+. ....++++||++.      .+++++++..+.|.+++.
T Consensus       307 --~gg~fi~~~~~----~~~~~~~~l~~~~gi~v~pg~~f~~-~~~~~~~iRis~~------~~~~~~~~~l~~l~~~l~  373 (374)
T PRK05839        307 --PATFYVWLPVD----NDEEFTKKLYQNEGIKVLPGSFLGR-NGIGKGYVRIALV------YDTPKLEKALEIIKTYLE  373 (374)
T ss_pred             --CeeEEEEEeCC----ChHHHHHHHHHHCCEEEeCchhhCC-CCCCCCeEEEEec------CCHHHHHHHHHHHHHHhh
Confidence              23567788774    234555555 569999954322111 1113589999973      247888888888887764

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.88  E-value=2.2e-20  Score=194.03  Aligned_cols=316  Identities=17%  Similarity=0.220  Sum_probs=213.4

Q ss_pred             CCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccc
Q 009673          136 GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKR  215 (529)
Q Consensus       136 ~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~  215 (529)
                      |...|+|.+...++|    +.+++++|.++     .|.++||+.|+..++...++|||+|  +...+   +.    +...
T Consensus        70 GDd~Yagd~s~~~LE----~~vAe~lG~e~-----aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~---f~----Tt~a  131 (460)
T PRK13237         70 GDEAYAGSRNFYHLE----ETVQEYYGFKH-----VVPTHQGRGAENLLSRIAIKPGQYV--PGNMY---FT----TTRY  131 (460)
T ss_pred             cchhhcCCCcHHHHH----HHHHHHHCCCe-----EEEeCCHHHHHHHHHHhCCCCcCEE--CCccc---hH----hhHH
Confidence            333467777788888    67788999986     3667899999998766668999976  33222   11    1111


Q ss_pred             ccccccceEEEEEcc---------cCCCCCCCCHHHHHHHhhhcC---CcEEEEc--CCCCCC-C---CCHHHHHHHHHH
Q 009673          216 RVSGTSIYFESMPYR---------LDESTGLVDYDMLEKTAILFR---PKLIIAG--ASAYPR-D---FDYPRMRQIADA  277 (529)
Q Consensus       216 ~i~~~g~~~~~v~~~---------v~~~~~~iD~d~le~~i~~~~---pklIi~~--~s~~p~-~---~d~~~i~~ia~~  277 (529)
                      .+...|.  ..+.+.         .++.++.+|+++|++.|++..   +.+|.+.  .+.+++ .   .++++|.++|++
T Consensus       132 hI~~~Ga--~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~  209 (460)
T PRK13237        132 HQELNGG--IFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDK  209 (460)
T ss_pred             HHHhCCc--EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHH
Confidence            1334444  222221         124578999999999998632   2233222  222222 2   478999999999


Q ss_pred             hCCEEEEecccccc---ccc---ccccCCC--------CCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhccc
Q 009673          278 VGALLMMDMAHISG---LVA---ASVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNA  343 (529)
Q Consensus       278 ~g~~livD~ah~~G---li~---~~~~~~~--------~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~  343 (529)
                      ||+.||.|+||..|   +|-   .+....+        +.++|.+++|+||.+.++-||+|+++++     ++.++++..
T Consensus       210 ~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~GG~i~t~D~-----eL~~~~r~~  284 (460)
T PRK13237        210 HGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIGGFLAMNDE-----ELFDEAKEL  284 (460)
T ss_pred             cCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCceEEEECCH-----HHHHHHHHh
Confidence            99999999999988   331   1111222        2479999999999998888999999986     888887765


Q ss_pred             --ccCCC--CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCC-----
Q 009673          344 --VFPGL--QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM-----  414 (529)
Q Consensus       344 --~~p~~--~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~-----  414 (529)
                        .++|+  .|+.....++|++++|.+...   .+|.++..++.++|.+.|.+.|++++.+ +..|-+++|....     
T Consensus       285 ~~~~eG~~tygg~~grd~~alAvgl~E~~~---~~y~~~ri~~~~~l~~~L~~~Gvpv~~p-~ggH~v~vda~~~lph~~  360 (460)
T PRK13237        285 VVVYEGMPSYGGMAGRDMEAMAIGIEESVQ---YEYIEHRVGQVRYLGEKLLAAGVPIVEP-VGGHAVFLDARRFLPHLP  360 (460)
T ss_pred             ccccCCCcCCCChhhhHHHHHHhHHHhhch---HHHHHHHHHHHHHHHHHHHHCCCceecC-CCceEEEEEhHHhCCCCC
Confidence              44453  445444578899988987654   3788889999999999999999999975 3468888875421     


Q ss_pred             --CCcHHHH-HHhHhcCCeEEc-CCCC-----CCCCCCCCC--CeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 009673          415 --GIDGARV-EKILDMASITLN-KNSV-----PGDKSALVP--GGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEA  483 (529)
Q Consensus       415 --~i~~~~~-~~~L~~~GI~v~-~~~~-----Pg~~~~~~~--~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~~  483 (529)
                        ...++.+ ..+..+.||... .+++     |.......+  .-+|+.+|-   |-+|.+.|+.+++.|..+.++...+
T Consensus       361 ~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaipr---r~yt~~h~~~v~~~~~~~~~~~~~~  437 (460)
T PRK13237        361 QDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPR---RVYTYAHMDVVADSVIKLYKHREDI  437 (460)
T ss_pred             cccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeecccc---ccccHHHHHHHHHHHHHHHHhHhhc
Confidence              2223443 444467888642 2221     111111111  469998764   5588999999999999998876544

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=99.88  E-value=1.5e-20  Score=195.12  Aligned_cols=316  Identities=14%  Similarity=0.103  Sum_probs=204.6

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.++|..++|+  +|+.+++++...+..  ..+|+.      .. ..+++    +.+++.++++++    +|.+++|+ +
T Consensus        23 ~~i~l~~~~n~~~~~~~~~~a~~~~~~~--~~~Y~~------~~-~~~Lr----~aia~~~~v~~~----~I~it~G~~~   85 (360)
T PRK07392         23 AILDFSASINPLGPPESVIAAIQSALSA--LRHYPD------PD-YRELR----LALAQHHQLPPE----WILPGNGAAE   85 (360)
T ss_pred             cEEEeCCcCCCCCCCHHHHHHHHHHHHH--hhcCCC------cC-HHHHH----HHHHHHhCcChh----hEEECCCHHH
Confidence            45888888774  678999998766543  123332      11 12343    556667788875    56679998 8


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCC----CCCHHHHHHHhhhcCCcEE
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG----LVDYDMLEKTAILFRPKLI  255 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~----~iD~d~le~~i~~~~pklI  255 (529)
                      ++..++.++. +||.|++++|.|.++.        ..+...|.  ++++++++.+++    ..|++++++.. . +++++
T Consensus        86 ~i~~~~~~l~-~g~~vlv~~P~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~  152 (360)
T PRK07392         86 LLTWAGRELA-QLRAVYLITPAFGDYR--------RALRAFGA--TVKELPLPLDQPSPGLTLRLQTLPPQL-T-PNDGL  152 (360)
T ss_pred             HHHHHHHHhC-CCCeEEEECCCcHHHH--------HHHHHcCC--eEEEEecccccCCcccccCHHHHHHhc-c-CCCEE
Confidence            8888888765 7899999999775542        23344565  666666654432    35677776543 2 67899


Q ss_pred             EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-c-ccEEEecccccc--cCCCCeEEEe
Q 009673          256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-Y-CDVVTTTTHKSL--RGPRGGMIFF  326 (529)
Q Consensus       256 i~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~-~-aDiv~~S~hK~l--~GprgG~i~~  326 (529)
                      ++++|+||+  ..+.++|.++++++++ +|+|+++ ..+...+..++.+   . + --+++.|++|++  +|.|.||+++
T Consensus       153 ~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y-~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~  230 (360)
T PRK07392        153 LLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAF-MDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIA  230 (360)
T ss_pred             EEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECch-hhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeC
Confidence            999999998  6788999999999985 6669984 4544333212211   1 1 127889999986  7999999999


Q ss_pred             eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchH-HHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCC
Q 009673          327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVEL-GYKLVSGGSDN  404 (529)
Q Consensus       327 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~  404 (529)
                      ++      ++.+++.....+  .+.+.. ...++..+++   ...+ +...+.+.++++.+.+.|++. |+.+..+  ..
T Consensus       231 ~~------~~~~~~~~~~~~--~~~s~~-~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~--~~  296 (360)
T PRK07392        231 HP------DRLQRWQQWRDP--WPVNGL-AAAAAIAALA---DRDFQQQTWAWLPPAREALFQGLASLPGLTPLPS--AA  296 (360)
T ss_pred             CH------HHHHHHHhhCCC--CCCCHH-HHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCC--CC
Confidence            87      666666544322  122222 2333333443   2233 444566778888899999874 7776543  34


Q ss_pred             ceEEEccCCCCCcHHHHH-HhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          405 HLVLVDLRPMGIDGARVE-KILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       405 ~~~~v~~~~~~i~~~~~~-~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +++|+++..   +..++. ++|+++||.+.    ||.. +...+++|||++..       .++++++.+.+.+++.
T Consensus       297 ~fl~~~~~~---~~~~l~~~ll~~~gv~v~----pg~~f~~~~~~~iRi~~~~-------~~~~~~l~~al~~~~~  358 (360)
T PRK07392        297 NFLLVQSQG---SALQLQEKLLQQHRILIR----DCLSFPELGDRYFRVAVRT-------EAENQRLLEALAAILA  358 (360)
T ss_pred             CEEEEEcCC---CHHHHHHHHHhhCCEEEE----eCCCCCCCCCCEEEEEeCC-------HHHHHHHHHHHHHHhh
Confidence            667777642   445555 44678999995    4443 22235789998642       4678888888877654

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.88  E-value=4.3e-21  Score=198.70  Aligned_cols=333  Identities=13%  Similarity=0.074  Sum_probs=220.3

Q ss_pred             ceeEecCCCCCcHHHHHHHhhhhhccCCC--CCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHH
Q 009673          104 SLELIASENFTSRAVMEAVGSCLTNKYSE--GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN  181 (529)
Q Consensus       104 ~i~L~asen~~~~~V~eal~~~l~~~y~~--G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~  181 (529)
                      .+.++|+...+|+.|++|+...+.+-.+.  |.+. ......++.+.++ .+++.++++||.+.+ +.+.+...||+.|+
T Consensus         4 ~~l~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~-~~hr~~~f~~~~~-~~~~~l~~l~~~~~~-~~v~~~~gsgt~~~   80 (360)
T PRK05355          4 VYNFSAGPAMLPEEVLEQAQQELLDWNGSGMSVME-ISHRSKEFEAVAE-EAEADLRELLNIPDN-YKVLFLQGGASLQF   80 (360)
T ss_pred             eeeccCCCCCCCHHHHHHHHHHhhccccCCccccc-cCCCCHHHHHHHH-HHHHHHHHHhCCCCC-cEEEEEcCCchHHH
Confidence            35678899999999999998876321111  1111 1122345555555 567999999998432 22445567777999


Q ss_pred             HHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHH-HhhhcCCcEEEEcCC
Q 009673          182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEK-TAILFRPKLIIAGAS  260 (529)
Q Consensus       182 ~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~-~i~~~~pklIi~~~s  260 (529)
                      .+++..++.+||++++....   .++|.+.   +.....|.  . ..+..++..+..+..++++ .+++ ++++|.+.+.
T Consensus        81 Ea~~~nl~~~g~~~l~i~~G---~fg~r~~---~~a~~~g~--~-~~~~~~~~~g~~~~~~~~~~~l~~-~~~~V~~th~  150 (360)
T PRK05355         81 AMVPMNLLGGGKKADYVDTG---SWSKKAI---KEAKKYGE--V-NVAASSEDDGFTYIPPLDEWQLSD-DAAYVHYTSN  150 (360)
T ss_pred             HHHHHhcCCCCCeEEEEECC---HHHHHHH---HHHHHhCC--c-eEEecccccCCCCCCChhhccCCC-CCCEEEEccC
Confidence            99999999999999988643   3333331   12223343  1 2222332234444444444 6665 7899988865


Q ss_pred             CCCC--CC-CHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHH
Q 009673          261 AYPR--DF-DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL  336 (529)
Q Consensus       261 ~~p~--~~-d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l  336 (529)
                      .+++  .. |+++|      +|+++++|++++.|....++     +..|++++|.||+| ||.| |+++++++      +
T Consensus       151 eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv-----~~~d~~~~ssqK~l-gP~Glg~l~~s~~------~  212 (360)
T PRK05355        151 ETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDV-----SKFGLIYAGAQKNI-GPAGLTIVIVRED------L  212 (360)
T ss_pred             CCcceEecCccccc------CCCcEEEEcCccccCccCCH-----HHccEEEEeccccc-cCCceEEEEECHH------H
Confidence            5444  44 56655      89999999999988764332     23579999999998 6998 99999984      3


Q ss_pred             Hhhhccc-----------ccCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcCcE-EecC-CC
Q 009673          337 ESAINNA-----------VFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELGYK-LVSG-GS  402 (529)
Q Consensus       337 ~~~i~~~-----------~~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G~~-v~~~-gt  402 (529)
                      .+++...           ......++|+.+.+.++..+|+.+... +++++.++..+.++++.+.|++.|+. .+.+ ..
T Consensus       213 l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~  292 (360)
T PRK05355        213 LGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPED  292 (360)
T ss_pred             HhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhh
Confidence            3333221           001124799999999999999998877 78999999999999999999997752 2221 11


Q ss_pred             CC-ceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          403 DN-HLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       403 ~~-~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      .+ ....+.+. .+++..++...+.+.||.+.    +|..   ..+.+|+|+..+++    ++|++++.++|++++.+
T Consensus       293 rs~~v~sf~~~-~~~~~~~~~~~~~~~Gi~~~----~~~~---~~g~vRiS~~~~nt----~eei~~l~~~l~~~~~~  358 (360)
T PRK05355        293 RSRMNVPFTLA-DEELDKKFLAEAKAAGLVGL----KGHR---SVGGMRASIYNAMP----LEGVQALVDFMKEFERR  358 (360)
T ss_pred             cCCcEEEEEcC-ChHHHHHHHHHHHHCCCccc----CCCC---ccCcEEEECCCCCC----HHHHHHHHHHHHHHHHh
Confidence            12 22333332 22233456567778999972    2321   24789999876665    79999999999997753

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=99.88  E-value=9.7e-21  Score=196.37  Aligned_cols=314  Identities=14%  Similarity=0.098  Sum_probs=195.4

Q ss_pred             cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChH-
Q 009673          103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGS-  178 (529)
Q Consensus       103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs-  178 (529)
                      ..++|..+++  ++++.+.+++.....   ..+|+.      .....++++.+.+++.+.+|.+ .+.  .+|.+++|+ 
T Consensus        22 ~~i~l~~~~p~~~~~~~~~~~~~~~~~---~~~Y~~------~~G~~~lr~~ia~~~~~~~~~~~~~~--~~I~it~G~~   90 (357)
T TIGR03539        22 GIVDLSVGTPVDPVPPLIRAALAAAAD---APGYPQ------TWGTPELREAIVDWLERRRGVPGLDP--TAVLPVIGTK   90 (357)
T ss_pred             CeEEccCCCCCCCCCHHHHHHHHHHHh---hCCCCc------ccCCHHHHHHHHHHHHHhcCCCCCCc--CeEEEccChH
Confidence            4577876654  457888888865432   122332      1112355555667777776654 322  267779987 


Q ss_pred             HHHHHHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 009673          179 PANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA  257 (529)
Q Consensus       179 ~A~~~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~  257 (529)
                      +++..++.++ ++|||.|++++|.|.++..        .+...|.  +++.++        |++.+.    ..++++|++
T Consensus        91 ~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v~--------~~~~l~----~~~~~~v~~  148 (357)
T TIGR03539        91 ELVAWLPTLLGLGPGDTVVIPELAYPTYEV--------GALLAGA--TPVAAD--------DPTELD----PVGPDLIWL  148 (357)
T ss_pred             HHHHHHHHHHcCCCCCEEEECCCCcHHHHH--------HHHhcCC--EEeccC--------ChhhcC----ccCccEEEE
Confidence            8888887877 7999999999998754421        2234454  444442        223222    237899999


Q ss_pred             cCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--------cccEEEecccccc--cCCCCe
Q 009673          258 GASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--------YCDVVTTTTHKSL--RGPRGG  322 (529)
Q Consensus       258 ~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--------~aDiv~~S~hK~l--~GprgG  322 (529)
                      ++++||+  ..   ++++|.++|++||+++|+|+++. .+.+.+.....+.        .-.+++.|++|.+  +|+|+|
T Consensus       149 ~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G  227 (357)
T TIGR03539       149 NSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYL-ELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAG  227 (357)
T ss_pred             eCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchh-hhccCCCCccceecccCCCccccEEEEeccccccCCCceeEE
Confidence            8899997  34   46778899999999999999853 3333221111111        1137889999984  899999


Q ss_pred             EEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC
Q 009673          323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS  402 (529)
Q Consensus       323 ~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt  402 (529)
                      |+++++      ++.+++.........+.+...+ .++..++..  ....+..++.+.++++.+.+.|.+.|+.+..+ .
T Consensus       228 ~~i~~~------~~~~~~~~~~~~~~~~~~~~~q-~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p-~  297 (357)
T TIGR03539       228 FVAGDP------ALVAELLTVRKHAGLMVPAPVQ-AAMVAALGD--DGHVAEQKARYAARRAQLKPALEKAGFRIDHS-E  297 (357)
T ss_pred             EEecCH------HHHHHHHHHHhhcccCCCHHHH-HHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCC-C
Confidence            999876      6766665432222222222222 333334421  12235566777888888999998888776544 2


Q ss_pred             CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673          403 DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI  473 (529)
Q Consensus       403 ~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i  473 (529)
                      .+.++|+.+.   .+..++.+.|.++||.+.    ||.. ++..+++|||++..      +++++++..+.|
T Consensus       298 ~~~~~~~~~~---~~~~~~~~~l~~~gV~v~----pg~~f~~~~~~~iRis~~~------~~~~i~~~~~~l  356 (357)
T TIGR03539       298 AGLYLWATRG---EDAWDTVDRLAELGILVA----PGDFYGPAGSQHVRVALTA------TDERIAAAVARL  356 (357)
T ss_pred             ccEEEEEECC---CCHHHHHHHHHhCCEEEC----CccccCCCCCCeEEEEecC------CHHHHHHHHHhh
Confidence            3455666653   245677788899999995    4432 12235789999742      367777776654

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.88  E-value=3.5e-21  Score=200.08  Aligned_cols=315  Identities=19%  Similarity=0.199  Sum_probs=203.9

Q ss_pred             HHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCCCCE
Q 009673          116 RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDR  194 (529)
Q Consensus       116 ~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~pGD~  194 (529)
                      .+.++++...+.+.+..        ...+.++++|    +.++++||.++     -|.++||+.|+++++.++ ++|||+
T Consensus         5 ~e~~~~v~~~l~s~~~~--------~~g~~~~~fE----~~~a~~~g~~~-----~~~~~sgt~Al~~al~~l~~~~gde   67 (363)
T PF01041_consen    5 EEEIDAVLEVLRSGWLS--------TYGPYVEEFE----KEFAEYFGVKY-----AVAVSSGTSALHLALRALGLGPGDE   67 (363)
T ss_dssp             HHHHHHHHHHHHHTCCS--------SSSHHHHHHH----HHHHHHHTSSE-----EEEESSHHHHHHHHHHHTTGGTTSE
T ss_pred             HHHHHHHHHHHHhCCcc--------CCCHHHHHHH----HHHHHHhCCCe-----EEEeCChhHHHHHHHHhcCCCcCce
Confidence            45566666666655421        1135688888    67899999876     366799999999999998 789999


Q ss_pred             EEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHH
Q 009673          195 IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQI  274 (529)
Q Consensus       195 Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~i  274 (529)
                      |+++..++.+..        ..+...|.  +++.++++++++.+|++++++++++ ++|+|++. +.++...|+++|.++
T Consensus        68 Vi~p~~t~~~~~--------~ai~~~G~--~pv~~Di~~~~~~id~~~~~~~i~~-~t~ai~~~-h~~G~~~d~~~i~~~  135 (363)
T PF01041_consen   68 VIVPAYTFPATA--------SAILWAGA--EPVFVDIDPETLNIDPEALEKAITP-KTKAILVV-HLFGNPADMDAIRAI  135 (363)
T ss_dssp             EEEESSS-THHH--------HHHHHTT---EEEEE-BETTTSSB-HHHHHHHHHT-TEEEEEEE--GGGB---HHHHHHH
T ss_pred             EecCCCcchHHH--------HHHHHhcc--EEEEEeccCCcCCcCHHHHHHHhcc-CccEEEEe-cCCCCcccHHHHHHH
Confidence            999987654432        24555665  9999999999999999999999998 88988875 334446699999999


Q ss_pred             HHHhCCEEEEecccccccccccccCCCCCcccEEEeccc--ccccCCCCeEEEeeCCCcchhHHHhhhcccccCCC----
Q 009673          275 ADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL----  348 (529)
Q Consensus       275 a~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~----  348 (529)
                      |+++|++||.|+||+.|....|.....  ..|+.++|||  |.++...||+|+++++     ++.++++.....+.    
T Consensus       136 ~~~~~i~lIeD~a~a~g~~~~g~~~G~--~gd~~~fSf~~~K~i~~geGG~v~~~~~-----~~~~~~~~~~~~g~~~~~  208 (363)
T PF01041_consen  136 ARKHGIPLIEDAAQAFGARYKGRPVGS--FGDIAIFSFHPTKIITTGEGGAVVTNDP-----ELAERARALRNHGRSRDA  208 (363)
T ss_dssp             HHHTT-EEEEE-TTTTT-EETTEETTS--SSSEEEEESSTTSSS-SSS-EEEEESTH-----HHHHHHHHHTBTTEETSE
T ss_pred             HHHcCCcEEEccccccCceeCCEeccC--CCCceEecCCCCCCCcCCCCeeEEecHH-----HHHHHhhhhhccCcCccc
Confidence            999999999999999997765532222  4688888887  8898889999999985     56555533221111    


Q ss_pred             ---------CC-CChHHHH-HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEec--CCCC---CceEEEcc
Q 009673          349 ---------QG-GPHNHTI-GGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS--GGSD---NHLVLVDL  411 (529)
Q Consensus       349 ---------~g-~p~~~~i-aala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~--~gt~---~~~~~v~~  411 (529)
                               .| ...++.+ ||+  ++.++  ..+++..++.+++++.+.+.|.+. ++....  ++..   .+.+.+-+
T Consensus       209 ~~~~~~~~~~g~n~rm~~~~AAi--gl~QL--~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~  284 (363)
T PF01041_consen  209 FRRYRHELPPGYNFRMSELQAAI--GLAQL--KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRL  284 (363)
T ss_dssp             CSTTEESSSS--B-B-BHHHHHH--HHHHH--HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEE
T ss_pred             cccccccccCCcccccHHHHHHH--HHHHH--HHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccc
Confidence                     01 0112222 222  33333  345677888888999999999884 554443  2211   12223333


Q ss_pred             CCC-CCcHHHHHHhHhcCCeEEcCCC-CCCCC-CCCC----------C-------CeEEEccCCCccCCCCHHHHHHHHH
Q 009673          412 RPM-GIDGARVEKILDMASITLNKNS-VPGDK-SALV----------P-------GGIRIGSPAMTTRGFSEKEFVAIAD  471 (529)
Q Consensus       412 ~~~-~i~~~~~~~~L~~~GI~v~~~~-~Pg~~-~~~~----------~-------~~iRig~~~~tt~g~~~~d~~~la~  471 (529)
                      ... ..+.+.+.+.|.+.||.+...+ .|.+. +.+.          +       ..|.+.++    ..++++|++++++
T Consensus       285 ~~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~----~~lt~edv~~I~~  360 (363)
T PF01041_consen  285 PDEALADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIH----PRLTEEDVDYIAE  360 (363)
T ss_dssp             TCCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHS----TTSCHHHHHHHHH
T ss_pred             cccccchHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCC----CCCCHHHHHHHhh
Confidence            321 1356889999999999998765 23321 1110          0       12444332    2578999999999


Q ss_pred             HHH
Q 009673          472 FIH  474 (529)
Q Consensus       472 ~i~  474 (529)
                      .|+
T Consensus       361 ~ir  363 (363)
T PF01041_consen  361 AIR  363 (363)
T ss_dssp             HHH
T ss_pred             ccC
Confidence            874

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=99.88  E-value=3.7e-20  Score=195.00  Aligned_cols=338  Identities=12%  Similarity=0.036  Sum_probs=220.1

Q ss_pred             CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-C-CCCceeeecCChHHHHHHHHHhhc
Q 009673          112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-E-NKWGVNVQPLSGSPANFEVYTAIL  189 (529)
Q Consensus       112 n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~-~~~~~~V~~~sGs~A~~~~l~all  189 (529)
                      .++.|.+.+++.+.+...+  |.|..   .|.  ..++|+.+++|+++++|++ + +++.. +.+++||+||+.++.+..
T Consensus        51 t~~~p~~~~~~~~~l~~~~--~np~s---~~~--~~~le~~~~~~la~llg~~~~~~~~~g-~~TsGgTEAn~~al~~ar  122 (431)
T TIGR01788        51 TWMEPEARKLMDETINKNM--IDKDE---YPQ--TAEIENRCVNMLADLWHAPAKDAEAVG-TSTIGSSEAIMLGGLAMK  122 (431)
T ss_pred             CCCCHHHHHHHHHHHhcCC--CCccc---Ccc--HHHHHHHHHHHHHHHhCCCCCCCCCeE-EEechHHHHHHHHHHHHH
Confidence            4567889999988875433  34432   122  2388889999999999998 3 33322 223566699998876542


Q ss_pred             --------CCC-----CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673          190 --------KPH-----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII  256 (529)
Q Consensus       190 --------~pG-----D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi  256 (529)
                              +.|     -.|++.+.+|.+..        +.....|.  ++..+++|++++.+|+++|++++++ +|.+|+
T Consensus       123 ~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~--------ka~~~lg~--~v~~i~~d~~~~~vd~~~L~~~i~~-~t~lV~  191 (431)
T TIGR01788       123 WRWRKRMEAAGKPTDKPNLVMGSNVQVCWE--------KFARYFDV--ELREVPMDPGRYVIDPEQVVEAVDE-NTIGVV  191 (431)
T ss_pred             HHHHHHHHhcCCCCCCcEEEEcCcchHHHH--------HHHHHcCc--eeEEEecCCCceeeCHHHHHHHHhh-CCeEEE
Confidence                    112     26777776664432        22333454  5666667753468999999999987 788887


Q ss_pred             EcCCC--CCCCCCHHHHHHHHHHh------CCEEEEecccccccccc--cccCCCC--CcccEEEecccccccCCCC-eE
Q 009673          257 AGASA--YPRDFDYPRMRQIADAV------GALLMMDMAHISGLVAA--SVVADPF--KYCDVVTTTTHKSLRGPRG-GM  323 (529)
Q Consensus       257 ~~~s~--~p~~~d~~~i~~ia~~~------g~~livD~ah~~Gli~~--~~~~~~~--~~aDiv~~S~hK~l~Gprg-G~  323 (529)
                      +...+  .+...|+++|+++|+++      |+|+++|++|+.+..+.  +..+..+  .++|.++.|.|||+.||.| |+
T Consensus       192 ~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G~  271 (431)
T TIGR01788       192 CILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGVGW  271 (431)
T ss_pred             EEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCcEE
Confidence            77443  34489999999999999      99999999987554322  1112222  3789999999999889998 99


Q ss_pred             EEeeCCCcchhHHHhhhccc--------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-C
Q 009673          324 IFFKKDPVLGVELESAINNA--------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-G  394 (529)
Q Consensus       324 i~~~~~~~~~~~l~~~i~~~--------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G  394 (529)
                      ++++++.    .+.+.+...        ....+.++......++++..|......++.+..++..+++++|.+.|++. +
T Consensus       272 l~~r~~~----~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~  347 (431)
T TIGR01788       272 VIWRDEE----ALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGP  347 (431)
T ss_pred             EEEeChH----HcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            9998741    122222110        00122333333344455666666666788999999999999999999884 6


Q ss_pred             cEEecCCCCCceEEEccCC---CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673          395 YKLVSGGSDNHLVLVDLRP---MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD  471 (529)
Q Consensus       395 ~~v~~~gt~~~~~~v~~~~---~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~  471 (529)
                      ++++.+....+++.+.+.+   .+++..++.+.|.+.|+.+.....|-.  ..+...+|+.+...    .+.+.++.+.+
T Consensus       348 ~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~--~~~~~~lR~~~~~~----~~~~~~~~~~~  421 (431)
T TIGR01788       348 FEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKN--AEDIVVMRIVVREG----FSRDLAELLIE  421 (431)
T ss_pred             EEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCc--cCCeEEEEEEecCC----CCHHHHHHHHH
Confidence            9988642223333333332   135567788999999998754433311  01123589876433    44677788888


Q ss_pred             HHHHHHH
Q 009673          472 FIHEGVE  478 (529)
Q Consensus       472 ~i~~~~~  478 (529)
                      .|.+++.
T Consensus       422 ~~~~~~~  428 (431)
T TIGR01788       422 DIEAALA  428 (431)
T ss_pred             HHHHHHH
Confidence            7777665

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=99.88  E-value=4.7e-21  Score=198.50  Aligned_cols=275  Identities=20%  Similarity=0.189  Sum_probs=186.4

Q ss_pred             HHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCC-CEEEEcCCCCCccccccccccccccccccceEEEEEcccC
Q 009673          155 KRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD  232 (529)
Q Consensus       155 ~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~  232 (529)
                      +.+++++|++++    +|.+++|+ +++..++.++++|| |+|++++|.|..+.        ......|.  +++.++++
T Consensus        67 ~aia~~~~~~~~----~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~--------~~~~~~g~--~v~~v~~~  132 (354)
T PRK04635         67 NAYSAYAGVAPE----QILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYA--------ISAETFNV--GVKALPLT  132 (354)
T ss_pred             HHHHHHhCcCHH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH--------HHHHHcCC--EEEEEecC
Confidence            566778899885    56779998 89999999999999 99999998765321        12234455  66666665


Q ss_pred             CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHh-CCEEEEecccccccccccccCCCCC-ccc-E
Q 009673          233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPFK-YCD-V  307 (529)
Q Consensus       233 ~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~-g~~livD~ah~~Gli~~~~~~~~~~-~aD-i  307 (529)
                       +++.+|.+.+++ + + ++|+|++++|+||+  ..+.+++.++++.. +++||+|+++. .+........... +.. +
T Consensus       133 -~~~~~~~~~l~~-~-~-~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~-~~~~~~s~~~~~~~~~~~i  207 (354)
T PRK04635        133 -ADYQLPLDYIEQ-L-D-GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYI-EFCPEYSVADLLASYPNLV  207 (354)
T ss_pred             -CCCCCCHHHHHh-c-c-CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchH-hhccCcchHHHHhhCCCEE
Confidence             357899998873 3 4 89999999999997  77889999998864 79999999954 3221110000001 111 6


Q ss_pred             EEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Q 009673          308 VTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA  385 (529)
Q Consensus       308 v~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~  385 (529)
                      ++.|+||++  +|.|.||+++++      ++.+.+.....+.  +.+...+.+++ .++.....+..++..+++.++++.
T Consensus       208 v~~S~SK~~~l~GlRlG~~i~~~------~~~~~l~~~~~~~--~~~~~~~~~a~-~~l~~~~~~~~~~~~~~~~~~r~~  278 (354)
T PRK04635        208 VLRTLSKAFALAGARCGFTLANE------ELIEILMRVIAPY--PVPLPVSEIAT-QALSEAGLARMKFQVLDLNAQGAR  278 (354)
T ss_pred             EEechHHHhhhhHHHHhhhhCCH------HHHHHHHhhcCCC--CCCHHHHHHHH-HHHhcccHHHHHHHHHHHHHHHHH
Confidence            889999986  688999999987      6777766543222  22222222222 233321111235556778888899


Q ss_pred             HHHHHHhcC-cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHH
Q 009673          386 LASRLVELG-YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK  464 (529)
Q Consensus       386 l~~~L~~~G-~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~  464 (529)
                      +.+.|++.+ +.+..++  ..++|+++.    +..++.+.|+++||.+....    . ...++++||++.       +++
T Consensus       279 l~~~L~~~~~~~~~~~~--g~f~~~~~~----~~~~~~~~l~~~gv~v~~~~----~-~~~~~~lRis~~-------~~e  340 (354)
T PRK04635        279 LQAALSMYGGAKVLEGN--GNYVLAKFD----DVDAVFKALWDAGIVARAYK----D-PRLANCIRFSFS-------NRA  340 (354)
T ss_pred             HHHHHHhCCCceECCCC--CcEEEEECC----CHHHHHHHHHHCCEEEEECC----C-CCCCCeEEEEeC-------CHH
Confidence            999998865 7766542  346677664    35678888999999996421    1 123568999963       379


Q ss_pred             HHHHHHHHHHH
Q 009673          465 EFVAIADFIHE  475 (529)
Q Consensus       465 d~~~la~~i~~  475 (529)
                      |+++++++|++
T Consensus       341 ~~~~l~~al~~  351 (354)
T PRK04635        341 ETDKLIGLIRN  351 (354)
T ss_pred             HHHHHHHHHHH
Confidence            99999999865

>PRK07908 hypothetical protein; Provisional

Probab=99.88  E-value=2.5e-20  Score=192.72  Aligned_cols=314  Identities=15%  Similarity=0.164  Sum_probs=206.5

Q ss_pred             hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673          102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-  178 (529)
Q Consensus       102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-  178 (529)
                      .+.++|..++|+  +|+.+++++...+...  .+||..   .|   ..++    ++.+++++|++++    +|.+++|+ 
T Consensus        22 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~---~g---~~~l----r~aia~~~~~~~~----~I~it~Ga~   85 (349)
T PRK07908         22 PGLLDFAVNVRHDTPPEWLRERLAARLGDL--AAYPST---ED---ERRA----RAAVAARHGRTPD----EVLLLAGAA   85 (349)
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHhhHh--hcCCCc---cc---hHHH----HHHHHHHhCcChh----hEEECCCHH
Confidence            367889888874  6888999998766432  234321   11   2233    3667778898875    56678888 


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      +++..++.  ++||+ +++..|.+....        ..+...|.  +++.++++. ++.+|++.+    ++ ++++++++
T Consensus        86 ~al~~~~~--l~~~~-viv~~P~y~~~~--------~~~~~~G~--~i~~v~~~~-~~~~d~~~l----~~-~~~~i~l~  146 (349)
T PRK07908         86 EGFALLAR--LRPRR-AAVVHPSFTEPE--------AALRAAGI--PVHRVVLDP-PFRLDPAAV----PD-DADLVVIG  146 (349)
T ss_pred             HHHHHHHh--cCCCe-EEEeCCCChHHH--------HHHHHcCC--EEEeeccCc-ccCcChhHh----cc-CCCEEEEc
Confidence            88887776  57754 555677654332        12334554  777777764 378888855    33 78999999


Q ss_pred             CCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCC--CCccc-EEEecccccc--cCCCCeEEEeeCCCc
Q 009673          259 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FKYCD-VVTTTTHKSL--RGPRGGMIFFKKDPV  331 (529)
Q Consensus       259 ~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~--~~~aD-iv~~S~hK~l--~GprgG~i~~~~~~~  331 (529)
                      +++||+  ..+.++|.++|++ +.++|+|++|. .++. +..++.  ....+ +++.|+||++  +|+|.||+++++   
T Consensus       147 np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~-~~~~-~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~---  220 (349)
T PRK07908        147 NPTNPTSVLHPAEQLLALRRP-GRILVVDEAFA-DAVP-GEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAP---  220 (349)
T ss_pred             CCCCCCCCCcCHHHHHHHHhc-CCEEEEECcch-hhcc-CCccccccccCCCEEEEeecccccCCccceeeeeecCH---
Confidence            999997  7789999999964 88999999854 2332 211111  11223 6778999975  789999999887   


Q ss_pred             chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEcc
Q 009673          332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL  411 (529)
Q Consensus       332 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~  411 (529)
                         ++.+.+.........+   ....+++...+.......+++.++++.++++.+.+.|++.|+++..+ ....++|+++
T Consensus       221 ---~~~~~~~~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p-~~g~~~~~~~  293 (349)
T PRK07908        221 ---DVLARLTRGRAHWPVG---TLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVGARVVDP-AAAPFVLVRV  293 (349)
T ss_pred             ---HHHHHHHhcCCCCCcc---HHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCcEeccC-CCceEEEEEC
Confidence               6777765543222122   22333332222211112345667788888999999998888877654 2356778777


Q ss_pred             CCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          412 RPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       412 ~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ..    .+++.+.|+++||.+..    |+. +...+++|||++.       +++|++++.+.|++++.
T Consensus       294 ~~----~~~~~~~l~~~gI~v~~----g~~f~~~~~~~vRis~~-------~~~~~~~l~~al~~~~~  346 (349)
T PRK07908        294 PD----AELLRKRLRERGIAVRR----GDTFPGLDPDYLRLAVR-------PRAEVPVLVQALAEILK  346 (349)
T ss_pred             Cc----HHHHHHHHHhCCEEEEE----CCCCCCCCCCeEEEEeC-------CCccHHHHHHHHHHHHh
Confidence            52    46788889999999954    433 1223679999973       36899999999988754

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.88  E-value=8.1e-21  Score=198.29  Aligned_cols=327  Identities=15%  Similarity=0.104  Sum_probs=209.9

Q ss_pred             ceeEecCCCCCcHH-HHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673          104 SLELIASENFTSRA-VMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF  182 (529)
Q Consensus       104 ~i~L~asen~~~~~-V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~  182 (529)
                      .++++++...+++. |++++.......      ..|   +.++.+.++ .+++.++++||++.+ ..+.+...|||.++.
T Consensus        13 ~~~f~~Gp~~~~~~~v~~a~~~~~~~~------~hr---~~~f~~~~~-~~r~~l~~l~~~~~~-~~v~~~~gs~T~~~~   81 (378)
T PRK03080         13 DPRFSSGPCKKRPGWQLEALADALLGR------SHR---QKPVKALLK-RVIEGTRELLSLPEG-YEVGIVPGSDTGAWE   81 (378)
T ss_pred             CCCcCCCCcCCChHHHHHHHHhhhccc------CcC---CHHHHHHHH-HHHHHHHHHhCCCCC-ceEEEECCchHHHHH
Confidence            46677888777777 999998543210      111   235555555 678999999998532 112222347889999


Q ss_pred             HHHHhhcCC-CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 009673          183 EVYTAILKP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA  261 (529)
Q Consensus       183 ~~l~all~p-GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~  261 (529)
                      +++.+++++ ++.|+. +-+|+..+.    ..  .....|. .++..++.+ +++.+|+++++    .  +++|.+++..
T Consensus        82 ~~~~~l~~~~~~~vi~-~g~f~~~~~----~~--~~~~~g~-~~v~~~~~~-~g~~~d~~~i~----~--~~~V~~~h~~  146 (378)
T PRK03080         82 MALWSLLGARRVDHLA-WESFGSKWA----TD--VVKQLKL-EDPRVLEAD-YGSLPDLSAVD----F--DRDVVFTWNG  146 (378)
T ss_pred             HHHHhcCCCCcceEEE-eCHHHHHHH----HH--HHhhcCC-CCceEeccC-CCCCCCHhhcC----C--CCCEEEEecC
Confidence            999999875 455554 444443211    00  0012233 033333343 45678887743    2  4566666433


Q ss_pred             --CCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHh
Q 009673          262 --YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES  338 (529)
Q Consensus       262 --~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~  338 (529)
                        ++...|+++|++  +++|+++++|++|+.|....++.     .+|++++|.||||.||.| |+++++++      ..+
T Consensus       147 t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~-----~iD~~~~s~~K~l~~P~G~g~l~v~~~------~~~  213 (378)
T PRK03080        147 TTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWS-----KLDVYTFSWQKVLGGEGGHGMAILSPR------AVE  213 (378)
T ss_pred             Cccceeccchhhcc--ccCCCeEEEecccccccCCCCHH-----HCcEEEEehhhhCCCCCceEEEEECHH------HHH
Confidence              344889999999  88999999999999987754432     379999999999999998 99999983      333


Q ss_pred             hhccc---------------------c-cCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcC-
Q 009673          339 AINNA---------------------V-FPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG-  394 (529)
Q Consensus       339 ~i~~~---------------------~-~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G-  394 (529)
                      ++...                     . ..+..++|+...+.++..+|+.+... ++++..++..+.++++.+.|.+.+ 
T Consensus       214 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~  293 (378)
T PRK03080        214 RLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPW  293 (378)
T ss_pred             hhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            22210                     0 11223567777888888899988776 678888999999999999998865 


Q ss_pred             cEEecC--CCCC-ceEEEccCCC--CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHH
Q 009673          395 YKLVSG--GSDN-HLVLVDLRPM--GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI  469 (529)
Q Consensus       395 ~~v~~~--gt~~-~~~~v~~~~~--~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~l  469 (529)
                      +.++..  ...+ .++.+.+...  +.+.+ +...|.+.||.+..+...    . ..+.+|||...+++    ++|++++
T Consensus       294 ~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~-~~~~l~~~~i~v~~g~~~----~-~~~~vRis~~~~~t----~~di~~l  363 (378)
T PRK03080        294 ATPLVADPATRSNTSVTLDFVDAQAAVDAA-AVAKLLRENGAVDIEPYR----D-APNGLRIWCGPTVE----PADVEAL  363 (378)
T ss_pred             cccccCCccccCccEEEEEcCCchHHHHHH-HHHHHHHcCCeecccccc----C-CCCcEEEecCCCCC----HHHHHHH
Confidence            566532  1112 2333333320  23333 444454558877532110    1 24789999877665    8999999


Q ss_pred             HHHHHHHHHH
Q 009673          470 ADFIHEGVEI  479 (529)
Q Consensus       470 a~~i~~~~~~  479 (529)
                      +++|++++..
T Consensus       364 ~~al~~~~~~  373 (378)
T PRK03080        364 TPWLDWAFER  373 (378)
T ss_pred             HHHHHHHHHH
Confidence            9999987664

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=99.88  E-value=7e-21  Score=200.18  Aligned_cols=330  Identities=16%  Similarity=0.189  Sum_probs=198.9

Q ss_pred             hcceeEecCC----C-CCc--HHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceee
Q 009673          102 FKSLELIASE----N-FTS--RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNV  172 (529)
Q Consensus       102 ~~~i~L~ase----n-~~~--~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V  172 (529)
                      .+.|+|..+.    + .+|  +.+.+++...+.+....+|..   ..|   ..++.+...+++.+..+.  ++++  +.|
T Consensus        26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~---~~G---~~~lR~aia~~~~~~~~~~~~~~~--i~v   97 (396)
T PRK09257         26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLP---IEG---LAAYRQAVQELLFGADSPALAAGR--VAT   97 (396)
T ss_pred             cCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCC---CCC---CHHHHHHHHHHhcCCCCcccccCe--EEE
Confidence            3568887652    2 234  678888876653322112322   123   235555555666554432  3432  134


Q ss_pred             ecCChH-HHHHHHHHhh--cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc-CCCCCCCCHHHHHHHhh
Q 009673          173 QPLSGS-PANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAI  248 (529)
Q Consensus       173 ~~~sGs-~A~~~~l~al--l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v-~~~~~~iD~d~le~~i~  248 (529)
                      .+|+|+ +|+..++.++  ++|||+|++++|.|.++..        .+...|.  +++++++ +++++.+|+|++++.++
T Consensus        98 ~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~--------~~~~~g~--~~v~v~~~~~~~~~~d~~~l~~~~~  167 (396)
T PRK09257         98 VQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRA--------IFEAAGL--EVKTYPYYDAATKGLDFDAMLADLS  167 (396)
T ss_pred             EecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHH--------HHHHcCC--cEEEEeccccccCccCHHHHHHHHH
Confidence            778988 8998887655  5899999999998765531        3345565  6666666 33457899999999887


Q ss_pred             hcC--CcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccc-cccCCCC---C--c-ccEEEecccc
Q 009673          249 LFR--PKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAA-SVVADPF---K--Y-CDVVTTTTHK  314 (529)
Q Consensus       249 ~~~--pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~-~~~~~~~---~--~-aDiv~~S~hK  314 (529)
                      ..+  .+++++++++||+  ..   .+++|.++|++||+++|+|++ |.++.+. +....++   .  + --|+++|++|
T Consensus       168 ~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~-Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK  246 (396)
T PRK09257        168 QAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIA-YQGFGDGLEEDAYGLRAFAAAGLELLVASSFSK  246 (396)
T ss_pred             hCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecc-ccccccchHHHHHHHHHHHhcCCcEEEEEEcCC
Confidence            433  3455567899997  33   477888999999999999998 5555432 1101111   1  1 1277899999


Q ss_pred             cc--cCCCCeEEEe--eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh-----cCchHHHHHHHHHHHHHH
Q 009673          315 SL--RGPRGGMIFF--KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA-----QSPEFKVYQNKVVSNCRA  385 (529)
Q Consensus       315 ~l--~GprgG~i~~--~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~-----~~~~~~~~~~~i~~~a~~  385 (529)
                      ++  +|+|.||+++  .+.. ...++..++.........+.+.. ...+++..+..-     .....++.++++.++++.
T Consensus       247 ~~~~~GlRiG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~  324 (396)
T PRK09257        247 NFGLYGERVGALSVVAEDAE-EADRVLSQLKATIRTNYSNPPAH-GAAIVATILNDPELRAEWEAELEEMRERIKAMRQL  324 (396)
T ss_pred             cCccccccceeEEEEeCCHH-HHHHHHHHHHHHhhhhcCCCcHH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            87  5999999984  2210 00012222322211111222222 222222223210     011234567788888999


Q ss_pred             HHHHHHhcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCC
Q 009673          386 LASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF  461 (529)
Q Consensus       386 l~~~L~~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~  461 (529)
                      +.+.|++.+    +.+..+ ..+.+.|+.+     +.+.+.+++++.||.+    +|        .+ ||++..     .
T Consensus       325 l~~~L~~~~~~~~~~~~~p-~gg~~~w~~l-----~~~~~~~l~~~~~V~~----~p--------~~-ri~~~~-----~  380 (396)
T PRK09257        325 LVEALKAKGPSRDFDFIAR-QRGMFSYSGL-----TPEQVDRLREEFGVYA----VG--------SG-RINVAG-----L  380 (396)
T ss_pred             HHHHHHhcCCCCCcccccc-cceEEEecCC-----CHHHHHHHHHcCCEEE----cC--------CC-eEEEee-----C
Confidence            999998864    444333 2245666655     3466778889999988    33        12 998753     4


Q ss_pred             CHHHHHHHHHHHHHH
Q 009673          462 SEKEFVAIADFIHEG  476 (529)
Q Consensus       462 ~~~d~~~la~~i~~~  476 (529)
                      ++++++++++.|+++
T Consensus       381 ~~~~i~~~~~~i~~~  395 (396)
T PRK09257        381 NESNIDYVAEAIAAV  395 (396)
T ss_pred             CHHHHHHHHHHHHhh
Confidence            579999999999875

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.88  E-value=3.1e-20  Score=198.39  Aligned_cols=289  Identities=16%  Similarity=0.145  Sum_probs=189.8

Q ss_pred             HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcc
Q 009673          153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR  230 (529)
Q Consensus       153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~  230 (529)
                      .++++++++|++.+    ++.+++|+ +++.+++.++ .++||+|+++++.|+++.....    ......|.  +++.++
T Consensus       117 ~~~~la~l~g~~~~----~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~----~~~~~~G~--~~~~v~  186 (447)
T PRK00451        117 YQTMICELTGMDVA----NASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLK----TYLKGQGI--EVVEVP  186 (447)
T ss_pred             HHHHHHHHhCCCcc----eEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHH----HHHHhCCc--EEEEec
Confidence            34688999999874    45556666 7777788887 4899999999987765432110    00111343  667777


Q ss_pred             cCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEE--ecccccccccccccCCCCC-ccc
Q 009673          231 LDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMM--DMAHISGLVAASVVADPFK-YCD  306 (529)
Q Consensus       231 v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~liv--D~ah~~Gli~~~~~~~~~~-~aD  306 (529)
                      +++ + .+|++++++.+++ ++++|+++++++.+ ..|+++|.++|+++|+++++  |.. ..|.+     ..+.. ++|
T Consensus       187 ~~~-~-~~d~~~l~~~i~~-~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~-----~~~~~~~~D  257 (447)
T PRK00451        187 YED-G-VTDLEALEAAVDD-DTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLL-----KPPGEYGAD  257 (447)
T ss_pred             CCC-C-CCCHHHHHHhcCC-CeEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccC-----CCcccCCCC
Confidence            764 4 8999999999987 89999988774433 77999999999999999998  533 33332     11222 689


Q ss_pred             EEEeccccc-----ccCCCCeEEEeeCCCcchhHHHhhhc----------------------------ccccCCCCCCCh
Q 009673          307 VVTTTTHKS-----LRGPRGGMIFFKKDPVLGVELESAIN----------------------------NAVFPGLQGGPH  353 (529)
Q Consensus       307 iv~~S~hK~-----l~GprgG~i~~~~~~~~~~~l~~~i~----------------------------~~~~p~~~g~p~  353 (529)
                      ++++|.||+     ++||+.|++++++      ++.+.+.                            +.......+++.
T Consensus       258 ~~~~s~~k~~~~~~~~Gpg~G~l~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (447)
T PRK00451        258 IVVGEGQPLGIPLSFGGPYLGFFATRK------KLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQ  331 (447)
T ss_pred             EEEECCCcCCCCCCCCCCCchHHHhhH------HHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccH
Confidence            999998886     6889889999887      3444321                            000000111111


Q ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEE
Q 009673          354 NHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITL  432 (529)
Q Consensus       354 ~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v  432 (529)
                      .....+.+.+++.+...++++..+++.++++++.+.|++. |+++.. +...+.+.+++.   .+..++.+.|.+.||.+
T Consensus       332 ~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~~~~~~v~~~---~~~~~~~~~L~~~gi~~  407 (447)
T PRK00451        332 ALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFD-GPFFNEFVVRLP---KPAEEVNEALLEKGILG  407 (447)
T ss_pred             HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecC-CCeEEEEEEecC---CCHHHHHHHHHhcCCCC
Confidence            1111222224554555567888999999999999999985 687763 211122234442   24677888888888875


Q ss_pred             cCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          433 NKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       433 ~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      .   +++.. .+...+.+|++++.++|    ++|++++++.|++++
T Consensus       408 ~---~~~~~~~~~~~~~~rvs~~~~~t----~e~i~~l~~~L~~~~  446 (447)
T PRK00451        408 G---YDLGRYYPELGNHLLVCVTEKRT----KEDIDALVAALGEVL  446 (447)
T ss_pred             C---cccccccCCcCCEEEEecCCCCC----HHHHHHHHHHHHHHh
Confidence            3   22221 11124689999876654    799999999998653

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=99.88  E-value=7.6e-20  Score=175.57  Aligned_cols=332  Identities=16%  Similarity=0.120  Sum_probs=232.8

Q ss_pred             eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 009673          105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV  184 (529)
Q Consensus       105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~  184 (529)
                      ..|++++..+|.+|++||....     .|+..      .++...+ ....+-++..|....+.  ..+..++|+.+..++
T Consensus        19 ~L~gPGPsnl~~~V~~A~~~~~-----lgh~s------Pe~~qIm-~~v~egikyVFkT~n~~--tf~isgsGh~g~E~a   84 (385)
T KOG2862|consen   19 TLLGPGPSNLSGRVQEAMSRPS-----LGHMS------PEFVQIM-DEVLEGIKYVFKTANAQ--TFVISGSGHSGWEAA   84 (385)
T ss_pred             eeecCCCcCCCHHHHHhhcCCc-----cccCC------HHHHHHH-HHHHHHHHHHhccCCCc--eEEEecCCcchHHHH
Confidence            3678888889999999997432     33322      2333333 34557788899888654  357788999999999


Q ss_pred             HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC--CC
Q 009673          185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS--AY  262 (529)
Q Consensus       185 l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s--~~  262 (529)
                      +..++.|||.|++...   |.+++.+..   ..+..|+.+++++  .+ ......+|+|++.+..++|++|++...  +.
T Consensus        85 l~N~lePgd~vLv~~~---G~wg~ra~D---~~~r~ga~V~~v~--~~-~G~~~~le~i~~~lsqh~p~~vfv~hgdsST  155 (385)
T KOG2862|consen   85 LVNLLEPGDNVLVVST---GTWGQRAAD---CARRYGAEVDVVE--AD-IGQAVPLEEITEKLSQHKPKAVFVTHGDSST  155 (385)
T ss_pred             HHhhcCCCCeEEEEEe---chHHHHHHH---HHHhhCceeeEEe--cC-cccCccHHHHHHHHHhcCCceEEEEecCccc
Confidence            9999999999998864   333333211   2244566445444  43 356899999999999999999998743  34


Q ss_pred             CCCCC-HHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCcchhHHHh
Q 009673          263 PRDFD-YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES  338 (529)
Q Consensus       263 p~~~d-~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~  338 (529)
                      +...| ++.+.++|++|++++++|...+.|....     -++  ++|+..+..+|.+.+|.| +.|..++.      ..+
T Consensus       156 gV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F-----~mDewgVDvaytgSQKaL~aP~GLsiisfS~k------a~~  224 (385)
T KOG2862|consen  156 GVLQDLLAISGELCHKHEALLLVDTVASLGGTEF-----EMDEWGVDVAYTGSQKALGAPAGLSIISFSDK------ALE  224 (385)
T ss_pred             cccchHHHHHHHHhhcCCeEEEEechhhcCCccc-----eehhhcccEEEecchhhcCCCCCcceeecCHH------HHH
Confidence            44677 6677799999999999998766554321     122  799999999999999999 88888774      222


Q ss_pred             hhc------------------cccc----CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcE
Q 009673          339 AIN------------------NAVF----PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK  396 (529)
Q Consensus       339 ~i~------------------~~~~----p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~  396 (529)
                      +++                  ....    ..+..+|....+.++-+||..+..+++++..++.+++++.+...|++.|+.
T Consensus       225 ~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq  304 (385)
T KOG2862|consen  225 AIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQ  304 (385)
T ss_pred             HHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence            221                  1111    112346788889999999999888889999999999999999999999988


Q ss_pred             EecCCC--CCce-EEEccCCCCCcHHHHHHhHhc-CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673          397 LVSGGS--DNHL-VLVDLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF  472 (529)
Q Consensus       397 v~~~gt--~~~~-~~v~~~~~~i~~~~~~~~L~~-~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~  472 (529)
                      ......  .... -.+.+ +.++|..++...+.. .++.+..+     .++..+..+|||+...+   -+-+-|+.+.+.
T Consensus       305 ~fv~~e~~rlptvttv~v-p~gvDw~dVv~~~~~~~~vei~gg-----lg~~~gKv~RIGl~gcn---a~~e~i~~v~~l  375 (385)
T KOG2862|consen  305 LFVVDEELRLPTVTTVKV-PYGVDWKDVVAYAMSHYVVEIGGG-----LGPTVGKVFRIGLLGCN---ANVEYIDNVVEL  375 (385)
T ss_pred             ceecChhhccCcceeeec-CCCCCHHHHHHHHHHhcCEEeccc-----cCCCcccEEEEEEeecc---CCcHHHHHHHHH
Confidence            765211  1111 12223 568899887666655 57776432     23456788999976554   345788888888


Q ss_pred             HHHHHHH
Q 009673          473 IHEGVEI  479 (529)
Q Consensus       473 i~~~~~~  479 (529)
                      |+.++..
T Consensus       376 l~~alq~  382 (385)
T KOG2862|consen  376 LKLALQR  382 (385)
T ss_pred             HHHHHhh
Confidence            8777653

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=99.87  E-value=8.2e-21  Score=197.06  Aligned_cols=330  Identities=20%  Similarity=0.222  Sum_probs=207.8

Q ss_pred             ceeEecCCCC------CcHHHHHHHhh-hhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC
Q 009673          104 SLELIASENF------TSRAVMEAVGS-CLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS  176 (529)
Q Consensus       104 ~i~L~asen~------~~~~V~eal~~-~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s  176 (529)
                      .|+|..+++.      .++++++++.. .....-..+|+.      .....++++...+++.+..|.+.+.. .+|.+++
T Consensus         3 ~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~g~~~lr~~ia~~~~~~~~~~~~~~-~~i~~~~   75 (363)
T PF00155_consen    3 VINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPP------PQGYPELREAIADFLGRRYGVPVDPE-ANILVTS   75 (363)
T ss_dssp             EEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTC------TTHHHHHHHHHHHHHHHHHTHHTTGG-EGEEEES
T ss_pred             EEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCC------chhhHHHHHHHHHHhhhccCcccccc-eEEEEec
Confidence            4666655542      34566666654 222222223332      22345666555555554444443321 2677899


Q ss_pred             hH-HHHHHHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC-CCCCCCCHHHHHHHhhhc---
Q 009673          177 GS-PANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILF---  250 (529)
Q Consensus       177 Gs-~A~~~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~-~~~~~iD~d~le~~i~~~---  250 (529)
                      |+ +++..++..+ .++||+|++++|.|.++.        ..+...|.  ++++++++ .+++.+|+++|++.+++.   
T Consensus        76 G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~--------~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  145 (363)
T PF00155_consen   76 GAQAALFLLLRLLKINPGDTVLVPDPCYPSYI--------EAARLLGA--EVIPVPLDSENDFHLDPEALEEALDELPSK  145 (363)
T ss_dssp             HHHHHHHHHHHHHHSSTTSEEEEEESSSTHHH--------HHHHHTTS--EEEEEEEEETTTTEETHHHHHHHHHTSHTT
T ss_pred             ccccchhhhhhcccccccccceecCCcccccc--------ccccccCc--eeeecccccccccccccccccccccccccc
Confidence            99 5566666677 789999999999876543        13344565  56666654 246899999999999874   


Q ss_pred             --CCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccC----CCCC-ccc-EEEecccccc-
Q 009673          251 --RPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVA----DPFK-YCD-VVTTTTHKSL-  316 (529)
Q Consensus       251 --~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~----~~~~-~aD-iv~~S~hK~l-  316 (529)
                        ++++|+++.++||+  ..+   +++|.++|+++|+++|+|++|. ++...+...    ..+. +.+ +++.|++|++ 
T Consensus       146 ~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g  224 (363)
T PF00155_consen  146 GPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYS-DLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFG  224 (363)
T ss_dssp             TETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTT-TGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTT
T ss_pred             ccccceeeecccccccccccccccccchhhhhcccccceeeeecee-ccccCCCccCcccccccccccceeeeecccccc
Confidence              46789999999987  444   4555556999999999999954 444332110    1111 233 8889999986 


Q ss_pred             -cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHHHhc
Q 009673          317 -RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS--PEFKVYQNKVVSNCRALASRLVEL  393 (529)
Q Consensus       317 -~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~--~~~~~~~~~i~~~a~~l~~~L~~~  393 (529)
                       +|.|.||+++++      ++.+.+.....++..  +.. ...+++..+.....  ...++.++++.++++.+.+.|++.
T Consensus       225 ~~GlRvG~i~~~~------~~~~~l~~~~~~~~~--~~~-~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~  295 (363)
T PF00155_consen  225 LPGLRVGYIVAPP------ELIERLRRFQRSGLS--SSP-MQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI  295 (363)
T ss_dssp             SGGGTEEEEEEEH------HHHHHHHHHHHHTTS--SHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccccccccccchh------hhhhhhhhccccccc--cch-hhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh
Confidence             678889999977      677777654433322  222 22222223332211  145778889999999999999988


Q ss_pred             CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhc-CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673          394 GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF  472 (529)
Q Consensus       394 G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~-~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~  472 (529)
                      |+.+..+. .+++.|+.+...  +..++.+.|.+ .||.+.++..++    . +++|||++ +.    .++++++++++.
T Consensus       296 ~~~~~~~~-~~~~~~~~~~~~--~~~~l~~~L~~~~gi~v~pg~~~~----~-~~~iRi~~-a~----~~~e~~~~~~~~  362 (363)
T PF00155_consen  296 GITVLPPE-AGFFLWVRLDPN--DAEELAQELLEEYGILVRPGSYFG----V-PGYIRISL-AS----HSEEDLEEALER  362 (363)
T ss_dssp             TSEEEHHS-BSSEEEEEESHH--HHHHHHHHHHHHHTEEEEEGGGGT----S-TTEEEEEG-GC----SCHHHHHHHHHH
T ss_pred             hhheeecc-CccEEEEEcccc--hHHHHHHHHHHhCCEEEEecCCCC----C-CCEEEEEe-cc----CCHHHHHHHHhh
Confidence            99988653 345666665422  34556555555 599995443332    2 78999997 22    458999999887


Q ss_pred             H
Q 009673          473 I  473 (529)
Q Consensus       473 i  473 (529)
                      |
T Consensus       363 l  363 (363)
T PF00155_consen  363 L  363 (363)
T ss_dssp             H
T ss_pred             C
Confidence            5

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>cd00609 AAT_like Aspartate aminotransferase family

Probab=99.87  E-value=5.4e-20  Score=188.93  Aligned_cols=299  Identities=19%  Similarity=0.180  Sum_probs=196.6

Q ss_pred             hhHHHHHHHHHHHHHHHcCCCCCCCceeeecC-ChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673          144 EYIDELETLCQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI  222 (529)
Q Consensus       144 ~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~-sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~  222 (529)
                      ...+++++..++++...++.....  .++.++ +|++++..++.++.++||+|+++++.|.++..        .+...|.
T Consensus        36 ~~~~~l~~~l~~~l~~~~~~~~~~--~~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~--------~~~~~~~  105 (350)
T cd00609          36 PGLPELREAIAEWLGRRGGVDVPP--EEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEA--------AARLAGA  105 (350)
T ss_pred             CCcHHHHHHHHHHHHHHhCCCCCc--ceEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHCCC
Confidence            345677766667777766642211  133334 45599999999999999999999987765531        2333443


Q ss_pred             eEEEEEcccCCCCCCCCH--HHHHHHhhhcCCcEEEEcCCCCCC--CCCHH---HHHHHHHHhCCEEEEecccccccccc
Q 009673          223 YFESMPYRLDESTGLVDY--DMLEKTAILFRPKLIIAGASAYPR--DFDYP---RMRQIADAVGALLMMDMAHISGLVAA  295 (529)
Q Consensus       223 ~~~~v~~~v~~~~~~iD~--d~le~~i~~~~pklIi~~~s~~p~--~~d~~---~i~~ia~~~g~~livD~ah~~Gli~~  295 (529)
                        +++.++++. ++..+.  +.++..+.+ ++++|++..++|++  ..|.+   +|.++|+++|+++++|++|..+.. .
T Consensus       106 --~~~~i~~~~-~~~~~~~~~~~~~~~~~-~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~-~  180 (350)
T cd00609         106 --EVVPVPLDE-EGGFLLDLELLEAAKTP-KTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVY-D  180 (350)
T ss_pred             --EEEEEeccc-ccCCccCHHHHHhhcCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhcee-C
Confidence              566666653 334443  666666655 89999988777765  55544   555899999999999999765432 2


Q ss_pred             cccC----CCCC-cccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc
Q 009673          296 SVVA----DPFK-YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ  368 (529)
Q Consensus       296 ~~~~----~~~~-~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~  368 (529)
                      +...    ..-. +.|++++|+||++  .|++.|+++++++     ++.+.+..... ...++++.....++..+++...
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~  254 (350)
T cd00609         181 GEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE-----ELLERLKKLLP-YTTSGPSTLSQAAAAAALDDGE  254 (350)
T ss_pred             CcccccccCcCccCcEEEEeecccccCCcccceEEEecCHH-----HHHHHHHHHHH-hcccCCChHHHHHHHHHHhCcH
Confidence            2211    1111 5789999999998  4667799999874     46665554322 2234555666666666666432


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCe
Q 009673          369 SPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGG  448 (529)
Q Consensus       369 ~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~  448 (529)
                       .+++...+++.++++++.+.|.+.+...+.......++++.+.. ..+.+.+.++|.++||.+.....+.   +..+.+
T Consensus       255 -~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~gi~i~~~~~~~---~~~~~~  329 (350)
T cd00609         255 -EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPE-GDDEEFLERLLLEAGVVVRPGSAFG---EGGEGF  329 (350)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCC-CChHHHHHHHHHhCCEEEecccccc---cCCCCe
Confidence             45678888899999999999998665432221234556666543 2345678889999999996532221   124678


Q ss_pred             EEEccCCCccCCCCHHHHHHHHHHHH
Q 009673          449 IRIGSPAMTTRGFSEKEFVAIADFIH  474 (529)
Q Consensus       449 iRig~~~~tt~g~~~~d~~~la~~i~  474 (529)
                      +||+....      ++|+++++++|+
T Consensus       330 iRi~~~~~------~~~i~~~~~al~  349 (350)
T cd00609         330 VRLSFATP------EEELEEALERLA  349 (350)
T ss_pred             EEEEeeCC------HHHHHHHHHHhh
Confidence            99997532      799999998875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.87  E-value=2e-20  Score=193.82  Aligned_cols=317  Identities=19%  Similarity=0.213  Sum_probs=212.9

Q ss_pred             CCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccc
Q 009673          135 PGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPK  214 (529)
Q Consensus       135 p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~  214 (529)
                      .|...|+|.+...++|    +.+++++|.++     -|.++||+.|+..+....++|||+|  +++.|-.       +..
T Consensus        62 ~GDe~yag~~s~~~lE----~~va~~~G~~~-----av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~-------Tt~  123 (450)
T TIGR02618        62 MGDEAYAGSRNFYHLE----RTVRELYGFKY-----VVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFT-------TTR  123 (450)
T ss_pred             hcchhhcCCCcHHHHH----HHHHHHHCCCe-----EEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHH-------HHH
Confidence            3444577778888898    67788999986     3567899999776666679999988  4443311       111


Q ss_pred             cccccccceEEEEEcccC---------CCCCCCCHHHHHHHhhhcC---CcEEEEcCCCC---CCC---CCHHHHHHHHH
Q 009673          215 RRVSGTSIYFESMPYRLD---------ESTGLVDYDMLEKTAILFR---PKLIIAGASAY---PRD---FDYPRMRQIAD  276 (529)
Q Consensus       215 ~~i~~~g~~~~~v~~~v~---------~~~~~iD~d~le~~i~~~~---pklIi~~~s~~---p~~---~d~~~i~~ia~  276 (529)
                      ..+...|.  .++.++.+         +.++.+|+++|++.|++..   +++|.+..++|   +..   .+++++.++|+
T Consensus       124 ahIe~~Ga--v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~  201 (450)
T TIGR02618       124 YHQEKNGA--TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCE  201 (450)
T ss_pred             HHHHhCCe--EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHH
Confidence            11344554  33333222         3568999999999998632   23444443332   223   46899999999


Q ss_pred             HhCCEEEEeccccccccc------ccccCCC--------CCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcc
Q 009673          277 AVGALLMMDMAHISGLVA------ASVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINN  342 (529)
Q Consensus       277 ~~g~~livD~ah~~Gli~------~~~~~~~--------~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~  342 (529)
                      +||++|+.|+||.+|--+      .+....+        +.++|.+++|++|...+|-||+|+.+++     ++.++++.
T Consensus       202 ~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~GG~l~~~d~-----~l~~k~r~  276 (450)
T TIGR02618       202 AHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIGGFLCMNDD-----EMFQSAKE  276 (450)
T ss_pred             HcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCceEEEeCCH-----HHHHHHHH
Confidence            999999999999885311      1222222        2379999999999999999999998875     78777765


Q ss_pred             c--ccCCC--CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCC--CC
Q 009673          343 A--VFPGL--QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM--GI  416 (529)
Q Consensus       343 ~--~~p~~--~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~--~i  416 (529)
                      .  .+.|+  .|+-....+.|++.+|++...   ..|..+...++++|.+.|.+.|++++.+ ..+|.+++|....  .+
T Consensus       277 ~~~~~eG~~tyGgla~r~~~ala~gL~e~~~---~~y~~~r~~~a~~La~~L~~~Gvpv~~p-~ggh~V~vda~~~lph~  352 (450)
T TIGR02618       277 LVVVFEGMPSYGGLAGRDMEAMAIGIREAVD---YEYIEHRVKQVRYLGDKLKAAGVPIVEP-VGGHAVFLDARRFLPHI  352 (450)
T ss_pred             HhhhcCCccccCchhhhhHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHCCCcccCC-CCcceEEEEhHHhCCCC
Confidence            4  33332  344344567888888887653   3677888888999999999999999764 4568898886431  12


Q ss_pred             -----cHHHH-HHhHhcCCeEEc-CCCC-----CCCCCCCCC--CeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHH
Q 009673          417 -----DGARV-EKILDMASITLN-KNSV-----PGDKSALVP--GGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLE  482 (529)
Q Consensus       417 -----~~~~~-~~~L~~~GI~v~-~~~~-----Pg~~~~~~~--~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~  482 (529)
                           .++.+ ..+..+.||... .+++     |-......+  .-+|+.+|-   |-+|.+.|+++++.+..+.++...
T Consensus       353 ~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaipr---r~yt~~h~~~v~~~~~~~~~~~~~  429 (450)
T TIGR02618       353 PQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPR---RVYTYAHMDVVADGIIKLYKHRDD  429 (450)
T ss_pred             ChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeecccc---ccccHhHHHHHHHHHHHHHhhHhh
Confidence                 23333 344467787632 2221     111111111  469998764   558899999999999999887644


Q ss_pred             H
Q 009673          483 A  483 (529)
Q Consensus       483 ~  483 (529)
                      +
T Consensus       430 ~  430 (450)
T TIGR02618       430 I  430 (450)
T ss_pred             c
Confidence            4

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.87  E-value=4.1e-20  Score=192.57  Aligned_cols=319  Identities=18%  Similarity=0.159  Sum_probs=200.1

Q ss_pred             ecCCCCC----cHHHHHHHhhhhhccC-------CCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecC
Q 009673          108 IASENFT----SRAVMEAVGSCLTNKY-------SEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPL  175 (529)
Q Consensus       108 ~asen~~----~~~V~eal~~~l~~~y-------~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~  175 (529)
                      .+|.+|+    ++.+.+++...+.. |       ..|..|+|...|. +.++++|    +.+++++|.+.    + +..+
T Consensus         9 ~~s~~YL~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~gs~~~~g~~~~~~~~e----~~la~~~~~~~----~-l~~~   78 (370)
T PRK05937          9 FVTNDFLGFSRSDTLVHEVEKRYRL-YCRQFPHAQLGYGGSRAILGPSSLLDDLE----HKIAHFHGAPE----A-FIVP   78 (370)
T ss_pred             eECCCccCCCCCHHHHHHHHHHHHH-hccccCCCCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCe----E-EEEC
Confidence            3466654    56666666554432 3       2345566655543 3455555    78899999965    2 5579


Q ss_pred             ChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----
Q 009673          176 SGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----  250 (529)
Q Consensus       176 sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-----  250 (529)
                      ||+.||..++..+.++||.|+.....|++.+..        +.....  ..+.++      .+|+++++++++..     
T Consensus        79 sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~--------~~~~~~--~~~~~~------~~d~~~l~~~l~~~~~~~~  142 (370)
T PRK05937         79 SGYMANLGLCAHLSSVTDYVLWDEQVHISVVYS--------LSVISG--WHQSFR------HNDLDHLESLLESCRQRSF  142 (370)
T ss_pred             ChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHH--------HHHcCC--ceEEec------CCCHHHHHHHHHhhhccCC
Confidence            999999877777778899998877777655421        111111  122332      46899999988742     


Q ss_pred             CCcEEEEcCCCCC--CCCCHHHHHHHHHHhCCEEEEeccccccccccccc----CCCCCcccEEEecccccccCCCCeEE
Q 009673          251 RPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV----ADPFKYCDVVTTTTHKSLRGPRGGMI  324 (529)
Q Consensus       251 ~pklIi~~~s~~p--~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~----~~~~~~aDiv~~S~hK~l~GprgG~i  324 (529)
                      ++.+|++++.+++  ...|+++|.++|+++|+++++|++|+.|.+..+..    ...+...++++.|++|.+ |+.|+.+
T Consensus       143 ~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~G~~v  221 (370)
T PRK05937        143 GRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSMGAAL  221 (370)
T ss_pred             CcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcCceEE
Confidence            2345556655443  38899999999999999999999999887644321    111112346778999987 6788666


Q ss_pred             EeeCCCcchhHHHhhhcccccCC-CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCC
Q 009673          325 FFKKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD  403 (529)
Q Consensus       325 ~~~~~~~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~  403 (529)
                      ++.+      ++...+.....|. ..++.+...++++..+++.+...+ ....+++.++++++.+.|...+     .+  
T Consensus       222 l~~~------~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~-----~~--  287 (370)
T PRK05937        222 LSSS------EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSAA-----PG--  287 (370)
T ss_pred             EcCH------HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCCC-----CC--
Confidence            6655      4433332111121 123345556777777887664333 4455666677777766664321     11  


Q ss_pred             CceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          404 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       404 ~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                       ....+.+.  +.+.+.+.+.|++.||.+.....|      ..+.||++++..+|    ++|++++++.|.++++..
T Consensus       288 -~~~~i~~~--~~~~~~~~~~L~~~gi~v~~~~~~------~~~~iRis~~~~~t----~edid~l~~~L~~~~~~~  351 (370)
T PRK05937        288 -CVQPIFLP--GISEQELYSKLVETGIRVGVVCFP------TGPFLRVNLHAFNT----EDEVDILVSVLATYLEKY  351 (370)
T ss_pred             -CEEEEEeC--ChhHHHHHHHHHHCCeeEEeeCCC------CCCEEEEEcCCCCC----HHHHHHHHHHHHHHHHHh
Confidence             11112232  234567888899999998643222      23579999887665    899999999999987643

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=99.87  E-value=2.4e-20  Score=193.94  Aligned_cols=284  Identities=15%  Similarity=0.101  Sum_probs=188.5

Q ss_pred             HHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCC-CEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673          154 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL  231 (529)
Q Consensus       154 ~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v  231 (529)
                      ++.+++++|++++    +|.+++|+ +++..++.++++|| |+|++.+|.++.+.        ......|.  +++++++
T Consensus        65 r~~ia~~~~~~~~----~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~--------~~~~~~g~--~~~~v~~  130 (364)
T PRK04781         65 RSALAALYGCAPE----QLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYA--------VCARLQNA--PLVEVPL  130 (364)
T ss_pred             HHHHHHHhCcChH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH--------HHHHHcCC--EEEEEec
Confidence            3667778898874    56778987 89999999999999 79999888654221        11233454  6666666


Q ss_pred             CC--CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHH--hCCEEEEecccccccccccccCCCCC-c
Q 009673          232 DE--STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-Y  304 (529)
Q Consensus       232 ~~--~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~~-~  304 (529)
                      +.  +++.+|++++++.+...++++|++++|+||+  ..+.+++.++++.  ++++||+|+++. .+.........+. +
T Consensus       131 ~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~-~f~~~~~~~~~~~~~  209 (364)
T PRK04781        131 VDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYG-EFSDVPSAVGLLARY  209 (364)
T ss_pred             CCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcch-hhcCCcchHHHHhhC
Confidence            32  2356899998665544489999999999997  6788888877764  479999999843 4332110000011 1


Q ss_pred             c-cEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 009673          305 C-DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS  381 (529)
Q Consensus       305 a-Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~  381 (529)
                      . -+++.|++|++  +|+|.||+++++      ++.+.+.+...+.  +.....+.++. .++.........+..+++.+
T Consensus       210 ~~vi~~~SfSK~~gl~GlRvGy~v~~~------~l~~~l~~~~~~~--~~~~~~~~~a~-~~l~~~~~~~~~~~~~~~~~  280 (364)
T PRK04781        210 DNLAVLRTLSKAHALAAARIGSLIANA------ELIAVLRRCQAPY--PVPTPCAALAE-QALSAPALAVTARRVAEVRA  280 (364)
T ss_pred             CCEEEEecChhhcccccceeeeeeCCH------HHHHHHHhccCCC--CCCHHHHHHHH-HHHhcccHHHHHHHHHHHHH
Confidence            1 27889999986  799999999987      7888777654433  22222233332 23432100123556667888


Q ss_pred             HHHHHHHHHHhc-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCC
Q 009673          382 NCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG  460 (529)
Q Consensus       382 ~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g  460 (529)
                      +++.+.+.|++. |+..+.+ +...++|+++.    +.+++.+.|.++||.|..    |+..+..++++||++.      
T Consensus       281 ~r~~l~~~L~~~~~~~~~~p-~~g~f~~~~~~----~~~~~~~~l~~~gI~v~~----~~~~~~~~~~~Ris~~------  345 (364)
T PRK04781        281 ERERLHAALAQLPGVRRVYP-SQGNFLLVRFD----DAEAAFQALLAAGVVVRD----QRAAPRLSDALRITLG------  345 (364)
T ss_pred             HHHHHHHHHHhCCCCCeECC-CCCcEEEEEcC----CHHHHHHHHHHCCeEEee----CCCCCCCCCeEEEeCC------
Confidence            899999999885 6642333 23456777764    356788889999999954    3321123578999864      


Q ss_pred             CCHHHHHHHHHHHHHHH
Q 009673          461 FSEKEFVAIADFIHEGV  477 (529)
Q Consensus       461 ~~~~d~~~la~~i~~~~  477 (529)
                       ++++++++.+.|+++.
T Consensus       346 -~~~~~~~l~~al~~~~  361 (364)
T PRK04781        346 -TPEQNDRVLAALQRTQ  361 (364)
T ss_pred             -CHHHHHHHHHHHHHHH
Confidence             3799999999997643

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=99.87  E-value=2.8e-20  Score=198.40  Aligned_cols=303  Identities=17%  Similarity=0.159  Sum_probs=204.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceE
Q 009673          146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF  224 (529)
Q Consensus       146 ~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~  224 (529)
                      ...+.+...+++....|+..+.  .+|.+|+|+ +|+.++...+++|||+|++-+|+|.+.+.        .....|.  
T Consensus       134 ~~~LR~~ia~~l~~~~g~~~~~--~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~--------~~~~~g~--  201 (459)
T COG1167         134 LPELREAIAAYLLARRGISCEP--EQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQ--------ALEALGA--  201 (459)
T ss_pred             cHHHHHHHHHHHHHhcCCccCc--CeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHH--------HHHHcCC--
Confidence            3455555667777677777542  368889999 99999999999999999999998765532        3344554  


Q ss_pred             EEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCCCC--CCC---HHHHHHHHHHhCCEEEEeccccccccccccc
Q 009673          225 ESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG-ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV  298 (529)
Q Consensus       225 ~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~-~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~  298 (529)
                      +++++++|  ...+|+|+|++.+...++|++++. ...||+  ..+   -++|.++|++||+++|.|.. +..+.+.+..
T Consensus       202 ~~~~vp~d--~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~-y~el~~~~~p  278 (459)
T COG1167         202 RVIPVPVD--EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDY-YGELRYDGPP  278 (459)
T ss_pred             cEEecCCC--CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCc-chhhhcCCCC
Confidence            77777776  357999999999988889999987 446886  344   45799999999999999987 4444444332


Q ss_pred             CCCCC-----cccEEEecccccc-cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHH-hcCch
Q 009673          299 ADPFK-----YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH-AQSPE  371 (529)
Q Consensus       299 ~~~~~-----~aDiv~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~-~~~~~  371 (529)
                      +.++.     +--|.++||||++ +|.|.||+++++      ++.+++.........+++...+ .+++.-+.. .....
T Consensus       279 ~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~------~~~~~~~~~k~~~~~~~s~~~Q-~~la~~l~~G~~~~h  351 (459)
T COG1167         279 PPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPP------ELIEKLLRLKQAADLGPSSLSQ-AALAAFLLSGHYDRH  351 (459)
T ss_pred             CCChHhhCCCCCEEEEeeehhhcccccceeeeeCCH------HHHHHHHHHHHHhcCCCChHHH-HHHHHHHHcCCHHHH
Confidence            32332     2238899999997 899999999998      6666654332222233333322 222221221 00112


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcC---cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC---CCCC
Q 009673          372 FKVYQNKVVSNCRALASRLVELG---YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK---SALV  445 (529)
Q Consensus       372 ~~~~~~~i~~~a~~l~~~L~~~G---~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~---~~~~  445 (529)
                      ....++.+.++++.+.+.|.+.+   +.+..+ ....++|+.+. .+++...+...+.+.||.+...   |..   .+..
T Consensus       352 l~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p-~gG~flwl~l~-~~~~~~~l~~~a~~~gv~i~~~---g~~f~~~~~~  426 (459)
T COG1167         352 LRRLRREYARRRDALLEALAEYLPELATWTRP-EGGLFLWLELP-EGIDARELLAAALEKGVVVTPL---GSAFSADGDP  426 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCCeeeecC-CceEEEEEEcC-CCCCHHHHHHHHHHCCCEEEcC---CccccCCCCC
Confidence            25566667778888888888842   233323 23456777774 5678888888888889988541   332   1113


Q ss_pred             CCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          446 PGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       446 ~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      .+++|+|+...     +++++++..+.|.+++...
T Consensus       427 ~~~~Rl~~s~~-----~~e~i~~gi~~l~~~~~~~  456 (459)
T COG1167         427 RNGLRLSFSSP-----SEEEIEEGIKRLAALLREA  456 (459)
T ss_pred             CCeEEEEcCCC-----CHHHHHHHHHHHHHHHHHH
Confidence            45899998653     4789999888888887653

>PLN02397 aspartate transaminase

Probab=99.87  E-value=2.3e-20  Score=197.71  Aligned_cols=292  Identities=20%  Similarity=0.240  Sum_probs=181.6

Q ss_pred             HHHHHHHHHHHHHHHcCCC--CCCCc-eeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673          146 IDELETLCQKRALAAFNLD--ENKWG-VNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI  222 (529)
Q Consensus       146 ~d~lE~~a~~~la~~~g~~--~~~~~-~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~  222 (529)
                      ..++.+...+++.+..+..  .+.+. ++|..++|+.++...+.+++.|||+|++++|.|.++..        .+...|.
T Consensus        93 ~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~--------~~~~~g~  164 (423)
T PLN02397         93 LAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHN--------IFRDAGV  164 (423)
T ss_pred             CHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHH--------HHHHcCC
Confidence            3456555556554433221  11110 12334455555666666777899999999998866532        3345565


Q ss_pred             eEEEEEccc-CCCCCCCCHHHHHHHhhh--cCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccc
Q 009673          223 YFESMPYRL-DESTGLVDYDMLEKTAIL--FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVA  294 (529)
Q Consensus       223 ~~~~v~~~v-~~~~~~iD~d~le~~i~~--~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~  294 (529)
                        +++++++ +++++.+|++.+++.+..  .+++++++++|+||+  ..   .+++|.++|++||++||+|++ |.++.+
T Consensus       165 --~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~-Y~~l~~  241 (423)
T PLN02397        165 --PVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSA-YQGFAS  241 (423)
T ss_pred             --eEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecc-cCCccC
Confidence              6667666 334578999999888763  256788888899997  33   577888999999999999998 666665


Q ss_pred             ccc---cCC--CCC--cc-cEEEecccccc--cCCCCeEEE--eeCCCcchhHHHh----hhcccccCCCCCCChHHHHH
Q 009673          295 ASV---VAD--PFK--YC-DVVTTTTHKSL--RGPRGGMIF--FKKDPVLGVELES----AINNAVFPGLQGGPHNHTIG  358 (529)
Q Consensus       295 ~~~---~~~--~~~--~a-Div~~S~hK~l--~GprgG~i~--~~~~~~~~~~l~~----~i~~~~~p~~~g~p~~~~ia  358 (529)
                      .+.   ...  .+.  +. -|+++|++|++  +|+|.||++  ..+.     ++.+    .+.........+.+...+ .
T Consensus       242 ~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~q-~  315 (423)
T PLN02397        242 GDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSA-----DVAVRVKSQLKLIARPMYSNPPIHGA-S  315 (423)
T ss_pred             CchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCH-----HHHHHHHHHHHHHHhcccCCCcHHHH-H
Confidence            331   111  111  11 27789999986  699999985  3221     3322    332221111222222222 2


Q ss_pred             HHHHHHHHh--cC---chHHHHHHHHHHHHHHHHHHHHhcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCC
Q 009673          359 GLAVCLKHA--QS---PEFKVYQNKVVSNCRALASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAS  429 (529)
Q Consensus       359 ala~al~~~--~~---~~~~~~~~~i~~~a~~l~~~L~~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~G  429 (529)
                      +.+.+|..-  ..   ..+++..+++.++++.+.+.|++.|    +.++.+ ..+++.|+++.     .+.+.++|+++|
T Consensus       316 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p-~gg~fl~~~l~-----~~~~~~Ll~~~~  389 (423)
T PLN02397        316 IVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITK-QIGMFSFTGLN-----KEQVDRMTKEYH  389 (423)
T ss_pred             HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccC-CceEEEecCCC-----HHHHHHHHHhCC
Confidence            222233210  00   1135667788999999999999876    665433 23566777663     456777789999


Q ss_pred             eEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          430 ITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       430 I~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      |.+.            +++ ||++..     .++++++++++.|++++.
T Consensus       390 V~v~------------~~~-Ri~~~~-----~~~~~i~~~~~~i~~~~~  420 (423)
T PLN02397        390 IYMT------------RDG-RISMAG-----LSSKNVPYLADAIHAVVT  420 (423)
T ss_pred             EEEC------------CCC-eEEEee-----CCHHHHHHHHHHHHHHHh
Confidence            9983            123 988643     557999999999999875

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=99.87  E-value=1.3e-19  Score=190.84  Aligned_cols=332  Identities=15%  Similarity=0.147  Sum_probs=197.8

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.++|..+++.  +++.|.+++...+.+....  .....|+.......+.+.+.+++.+ .+++++    +|.+++|+ +
T Consensus        34 ~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~Y~p~~g~~~lr~aia~~~~~-~~~~~d----~I~it~Ga~~  106 (402)
T TIGR03542        34 DIIRLGIGDTTQPLPASVIEAFHNAVDELASE--ETFRGYGPEQGYPFLREAIAENDYR-GRIDPE----EIFISDGAKC  106 (402)
T ss_pred             CeEEcCCCCCCCCCCHHHHHHHHHHHhccccc--ccccCCCCCCCCHHHHHHHHHHHHh-cCCCHH----HEEECCCcHH
Confidence            56888877764  6788999988776542110  0001121111223444333333221 156664    56779998 7


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc---------eEEEEEcccCCC-CCCCCHHHHHHHhhh
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI---------YFESMPYRLDES-TGLVDYDMLEKTAIL  249 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~---------~~~~v~~~v~~~-~~~iD~d~le~~i~~  249 (529)
                      ++.. +..++.|||+|++++|.|.++..        .....|.         +.++++++.+++ ++.+|++.      .
T Consensus       107 al~~-l~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------~  171 (402)
T TIGR03542       107 DVFR-LQSLFGSDNTVAVQDPVYPAYVD--------SNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE------E  171 (402)
T ss_pred             HHHH-HHHhcCCCCEEEEeCCCCcchHH--------HHHHcCCccccccccccceEEEeecchhhCCCCCccc------c
Confidence            7765 46677899999999998765431        1222332         115556666533 34555422      1


Q ss_pred             cCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---Cc---ccEEEecccccc--
Q 009673          250 FRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY---CDVVTTTTHKSL--  316 (529)
Q Consensus       250 ~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~~---aDiv~~S~hK~l--  316 (529)
                      .++++|++++|+||+  ..+   +++|.++|+++|++||+|+++ ..+...+..+.++   +.   .-+++.|++|.+  
T Consensus       172 ~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y-~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~  250 (402)
T TIGR03542       172 PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAY-SAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGF  250 (402)
T ss_pred             CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchh-hhhccCCCCCcchhhCCCCcccEEEEecCccccCC
Confidence            278999999999997  444   788899999999999999984 4444333222222   21   126689999976  


Q ss_pred             cCCCCeEEEeeCCCcchhHHH--------hhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Q 009673          317 RGPRGGMIFFKKDPVLGVELE--------SAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALAS  388 (529)
Q Consensus       317 ~GprgG~i~~~~~~~~~~~l~--------~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~  388 (529)
                      +|.|.||+++++      ++.        +.+.........+.+...+.++ ..++..-....+.+..+.+.++++.+.+
T Consensus       251 pGlRiG~~i~~~------~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~  323 (402)
T TIGR03542       251 TGVRLGWTVVPK------ELTYADGHSVIQDWERRQCTKFNGASYPVQRAA-EAAYAGEGLQPILEAISYYMENARILRK  323 (402)
T ss_pred             CCcceEEEEecH------HHhhcchhhHHHHHHHHhhhcccCCCHHHHHHH-HHHHcCcchhHHHHHHHHHHHHHHHHHH
Confidence            789999999987      443        2221111111112222333332 2233211111234556677888888999


Q ss_pred             HHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHh-HhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHH
Q 009673          389 RLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEF  466 (529)
Q Consensus       389 ~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~  466 (529)
                      .|++.|+.+..+ ....++|+.+.. .++..++.+. +++.||.+.    ||+. +....+++||+..      .+++++
T Consensus       324 ~L~~~~~~~~~~-~~~~f~~v~l~~-~~~~~~l~~~l~~~~gv~v~----pg~~f~~~~~~~iRis~~------~~~~~l  391 (402)
T TIGR03542       324 ALEAAGFKVYGG-EHAPYLWVKTPE-GISSWDFFDFLLYQYHVVGT----PGSGFGPSGEGFVRFSAF------GKRENI  391 (402)
T ss_pred             HHHhcCceecCC-CceeEEEEECCC-CCCHHHHHHHHHHhCCEEEe----CchhhCCCCCCEEEEEec------CCHHHH
Confidence            998888776543 345677888753 4566565554 567899995    4433 2223578999842      247888


Q ss_pred             HHHHHHHHHH
Q 009673          467 VAIADFIHEG  476 (529)
Q Consensus       467 ~~la~~i~~~  476 (529)
                      ++..+.|+++
T Consensus       392 ~~~l~~l~~~  401 (402)
T TIGR03542       392 VEACERIKEA  401 (402)
T ss_pred             HHHHHHHHhh
Confidence            8888888764

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.87  E-value=6.6e-20  Score=207.15  Aligned_cols=298  Identities=21%  Similarity=0.190  Sum_probs=207.3

Q ss_pred             HHHHHHHHHcCCCCCCCceeeecCChH---HHHHHHHHhhcCC-CC----EEEEcCCCCCccccccccccccccccccce
Q 009673          152 LCQKRALAAFNLDENKWGVNVQPLSGS---PANFEVYTAILKP-HD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIY  223 (529)
Q Consensus       152 ~a~~~la~~~g~~~~~~~~~V~~~sGs---~A~~~~l~all~p-GD----~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~  223 (529)
                      .+++++++++|.+.    +.+++.+|+   .++..++.++.++ ||    +|++++.+|+.+....        .+.|. 
T Consensus       572 ~~r~~la~i~g~~~----v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a--------~~~G~-  638 (993)
T PLN02414        572 DLGDLLCEITGFDS----FSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASA--------AMCGM-  638 (993)
T ss_pred             HHHHHHHHHhCCCe----EEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHH--------HHCCC-
Confidence            56799999999954    678888885   4788888888876 98    8999999988775322        23454 


Q ss_pred             EEEEEcccCCCCCCCCHHHHHHHhhh--cCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          224 FESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       224 ~~~v~~~v~~~~~~iD~d~le~~i~~--~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                       +++.++++ +++.+|+++|++++++  .++++|++.+++|-+  ..|+++|+++|+++|+++++|++|..++...   .
T Consensus       639 -~vv~v~~d-~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l---~  713 (993)
T PLN02414        639 -KIVVVGTD-AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGL---T  713 (993)
T ss_pred             -EEEEeccC-CCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCc---C
Confidence             77777776 5789999999999985  257888888766554  5679999999999999999999998776421   2


Q ss_pred             CCCC-cccEEEecccccccCCC-----C-eEEEeeCCCcchhHHHhhhccc----------cc-CCCCCC----ChHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR-----G-GMIFFKKDPVLGVELESAINNA----------VF-PGLQGG----PHNHTI  357 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr-----g-G~i~~~~~~~~~~~l~~~i~~~----------~~-p~~~g~----p~~~~i  357 (529)
                      .|.+ ++||+++|.||||.||.     | |++++++.      +...+-..          .+ +...|+    +..+..
T Consensus       714 ~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~------L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al  787 (993)
T PLN02414        714 SPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH------LAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSAL  787 (993)
T ss_pred             CccccCCCEEEecCCccCCcCcccCCCCeeeEEEchh------hcccCCCCccccCCCcccccCCCCcCCccchhhhhHH
Confidence            2333 79999999999986554     3 88888873      32222100          00 111233    222222


Q ss_pred             HHH-HHH-HHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCC---CCCceEEEccCC----CCCcHHHHHHhHhcC
Q 009673          358 GGL-AVC-LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG---SDNHLVLVDLRP----MGIDGARVEKILDMA  428 (529)
Q Consensus       358 aal-a~a-l~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~g---t~~~~~~v~~~~----~~i~~~~~~~~L~~~  428 (529)
                      .++ +.+ +..+..+++++..++...|++++++.|.+ ++.+...+   ...|-++++++.    .+++..++.+.|.++
T Consensus       788 ~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~-~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~  866 (993)
T PLN02414        788 ILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEG-HYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDY  866 (993)
T ss_pred             HHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHh-hCCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHc
Confidence            221 122 34444456677788999999999999987 55544322   223455666652    246668888888899


Q ss_pred             CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 009673          429 SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAK  484 (529)
Q Consensus       429 GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~~~  484 (529)
                      ||.....+.|      .++.+||+.....    +++|++++++.+..+.....++.
T Consensus       867 Gihapt~~~p------v~~~lmiepTE~~----skeelDrf~~al~~i~~e~~~~~  912 (993)
T PLN02414        867 GFHAPTMSWP------VPGTLMIEPTESE----SKAELDRFCDALISIREEIADIE  912 (993)
T ss_pred             CcEEeeeccc------cCCEEEEEeeeeC----CHHHHHHHHHHHHHHHHHHHHHh
Confidence            9987432222      3678999876654    48999999999988887776553

>PLN03032 serine decarboxylase; Provisional

Probab=99.87  E-value=2.8e-19  Score=184.62  Aligned_cols=264  Identities=17%  Similarity=0.150  Sum_probs=188.3

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCC-ceeeecCChHHHHHHHHHhhc--C
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKW-GVNVQPLSGSPANFEVYTAIL--K  190 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~-~~~V~~~sGs~A~~~~l~all--~  190 (529)
                      ....+++++...+.+.+  |.|.+.+..|.. ..++|+.+++++++++|.+++++ +  +.+++||+||+.++.+..  .
T Consensus        35 ~~~~~~~~~~~~~~~~~--gnP~s~~~~g~~-a~~~e~~v~~~ia~llg~~~~~~~G--~fTsGGTEaNl~al~~ar~~~  109 (374)
T PLN03032         35 FDYGELSQLMKYSINNL--GDPFIESNYGVH-SRQFEVGVLDWFARLWELEKDEYWG--YITTCGTEGNLHGILVGREVF  109 (374)
T ss_pred             cChHHHHHHHHhcccCC--CCCcccCCCCcc-HHHHHHHHHHHHHHHhCCCCccCCE--EEeCchHHHHHHHHHHHHHhC
Confidence            45567888888776655  677665433333 56788899999999999987653 3  334666799998877653  3


Q ss_pred             CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEc--CCCCCCCC
Q 009673          191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAG--ASAYPRDF  266 (529)
Q Consensus       191 pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~~--~s~~p~~~  266 (529)
                      +++.|+++..+|.+..        +.+...|..  +..++++ .++.+|+++|++++++.  +|.+|+++  ++..+.+.
T Consensus       110 ~~~~vi~s~~~H~Sv~--------kaa~~lg~~--~~~V~~d-~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~id  178 (374)
T PLN03032        110 PDGILYASRESHYSVF--------KAARMYRME--AVKVPTL-PSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVD  178 (374)
T ss_pred             CCcEEEeCCCceeHHH--------HHHHHcCCC--CeEeeeC-CCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCC
Confidence            5668888777665442        233445543  3345566 46899999999999763  46677765  33444589


Q ss_pred             CHHHHHHHHHHhC-----CEEEEecccccccccccccCC--CC-CcccEEEecccccccCCCC-eEEEeeCCCcchhHHH
Q 009673          267 DYPRMRQIADAVG-----ALLMMDMAHISGLVAASVVAD--PF-KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE  337 (529)
Q Consensus       267 d~~~i~~ia~~~g-----~~livD~ah~~Gli~~~~~~~--~~-~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~  337 (529)
                      |+++|+++|+++|     +|+++|+|++.+.++......  .+ .++|.++.|+||++..|.| |+++++++      +.
T Consensus       179 pi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~------~~  252 (374)
T PLN03032        179 DLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKK------HV  252 (374)
T ss_pred             CHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEch------hh
Confidence            9999999999996     599999998777664321111  12 2589999999998766999 99999973      33


Q ss_pred             hhhccc------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec
Q 009673          338 SAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS  399 (529)
Q Consensus       338 ~~i~~~------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~  399 (529)
                      +.+...      ....+.|+.+-...++++.+|+....++|.+..++..++++++.+.|++.|+.++.
T Consensus       253 ~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~  320 (374)
T PLN03032        253 KALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRL  320 (374)
T ss_pred             HhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEE
Confidence            333210      11234566555566777778888877889999999999999999999998888765

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=99.87  E-value=4e-20  Score=189.86  Aligned_cols=271  Identities=13%  Similarity=0.074  Sum_probs=179.4

Q ss_pred             HHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC
Q 009673          154 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD  232 (529)
Q Consensus       154 ~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~  232 (529)
                      ++.+++.+|++..    +|.+++|+ +++..++. +++||+ |++++|.|..+.        ..+...|.  +++.++++
T Consensus        46 r~~ia~~~~~~~~----~I~it~Gs~~~l~~~~~-~~~~~~-vv~~~P~y~~y~--------~~~~~~G~--~v~~vp~~  109 (332)
T PRK06425         46 EDQIKIYTQGLKI----KVLIGPGLTHFIYRLLS-YINVGN-IIIVEPNFNEYK--------GYAFTHGI--RISALPFN  109 (332)
T ss_pred             HHHHHHHhCCCcc----eEEECCCHHHHHHHHHH-HhCCCc-EEEeCCChHHHH--------HHHHHcCC--eEEEEeCC
Confidence            3678889999874    57779998 88887776 578875 555688664432        23445665  66666665


Q ss_pred             CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-
Q 009673          233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-  303 (529)
Q Consensus       233 ~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~-  303 (529)
                      .  ..+|.+.+++    .++|+|++++|+||+  ..+   +++|.++|+++|++||+|++ |..+.+.+ .+...   + 
T Consensus       110 ~--~~~~~~~l~~----~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~-Y~~~~~~~-~~~~~~~~~~  181 (332)
T PRK06425        110 L--INNNPEILNN----YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEA-FIDFVPNR-AEEDVLLNRS  181 (332)
T ss_pred             c--ccCcHHHHhh----cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecc-hhcccccc-chhHHHHhcc
Confidence            3  3456555542    389999999999997  444   66777788999999999998 44444322 11111   1 


Q ss_pred             c-ccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchH-HHHHHHH
Q 009673          304 Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKV  379 (529)
Q Consensus       304 ~-aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i  379 (529)
                      + --+++.|++|++  +|+|.||+++++      ++.+.+.....+...+     ..+. . ++.......+ ++..+.+
T Consensus       182 ~~~vi~~~SfSK~~~l~GlRiGy~v~~~------~li~~l~~~~~~~~~~-----~~~~-~-~l~~~~~~~~~~~~~~~~  248 (332)
T PRK06425        182 YGNVIIGRSLTKILGIPSLRIGYIATDD------YNMKISRKITEPWSVC-----DPAI-D-FIRSIDLDYVAKHSLDIM  248 (332)
T ss_pred             CCCEEEEeecHHhcCCchhhheeeecCH------HHHHHHHHcCCCCccC-----HHHH-H-HHHHhhhHHHHHHHHHHH
Confidence            1 127889999975  799999999987      7777776543322111     1111 1 1221111222 4567788


Q ss_pred             HHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCcc
Q 009673          380 VSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTT  458 (529)
Q Consensus       380 ~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt  458 (529)
                      .++++.+.+.|++.|+.+..+. ...++|+.+.    +..++.+.|.++||.+..    |.. +...++++||++.    
T Consensus       249 ~~~r~~l~~~L~~~g~~~~~~~-~g~f~~~~~~----~~~~~~~~l~~~gi~v~~----~~~f~~~~~~~iRis~~----  315 (332)
T PRK06425        249 ENERSYLINNLEAMGFRAAGDP-SANFITFMIP----DAHDFYSYLLKNGILVRL----LDDYECLGEQYIRIAIR----  315 (332)
T ss_pred             HHHHHHHHHHHHHCCCEECCCC-CceEEEEEcC----CHHHHHHHHHHCCeEEEE----CCCCCCCCCCEEEEEeC----
Confidence            8889999999998888876432 3456777663    456777777788999954    332 1223578999964    


Q ss_pred             CCCCHHHHHHHHHHHHHHH
Q 009673          459 RGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       459 ~g~~~~d~~~la~~i~~~~  477 (529)
                         +.++++++.++|++++
T Consensus       316 ---~~~~~~~l~~al~~~~  331 (332)
T PRK06425        316 ---RRSFNIKLVNALRNFL  331 (332)
T ss_pred             ---CHHHHHHHHHHHHHHh
Confidence               3689999999998764

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.86  E-value=4.9e-21  Score=193.26  Aligned_cols=220  Identities=18%  Similarity=0.153  Sum_probs=155.9

Q ss_pred             HHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC
Q 009673          153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD  232 (529)
Q Consensus       153 a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~  232 (529)
                      +++.++++||.+.    +.+.+.+++.++.+++.++++|||+|++..+.|.+++.        .+...|.  +++.++.+
T Consensus        64 ~~~~~A~~~ga~~----~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~--------~~~~~g~--~~~~v~~~  129 (294)
T cd00615          64 AQELAARAFGAKH----TFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVIN--------GLVLSGA--VPVYLKPE  129 (294)
T ss_pred             HHHHHHHHhCCCC----EEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHH--------HHHHCCC--EEEEecCc
Confidence            4478899999875    22333344589999999999999999999987765431        2344555  44444433


Q ss_pred             CCC-----CCCCHHHHHHHhhh-cCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCC-C-
Q 009673          233 EST-----GLVDYDMLEKTAIL-FRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K-  303 (529)
Q Consensus       233 ~~~-----~~iD~d~le~~i~~-~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-~-  303 (529)
                      .+.     +.+|++++++.+++ .++++|++++|++.+ ..|+++|.++|+++|+++++|+||+.++...+..+... . 
T Consensus       130 ~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~  209 (294)
T cd00615         130 RNPYYGIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMA  209 (294)
T ss_pred             cCcccCcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhc
Confidence            222     47999999999975 268888888776544 78999999999999999999999886654333222222 2 


Q ss_pred             cccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 009673          304 YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN  382 (529)
Q Consensus       304 ~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~  382 (529)
                      ++|++++|+||+++|+++ |++..+++..    ...++.........++|++..++++..+++.+.. +..++.++..++
T Consensus       210 ~~div~~S~hK~l~g~~~~~~l~~~~~~~----~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~-~g~~~~~~~~~~  284 (294)
T cd00615         210 GADIVVQSTHKTLPALTQGSMIHVKGDLV----NPDRVNEALNLHQSTSPSYLILASLDVARAMMAL-EGKELVEELIEL  284 (294)
T ss_pred             CCcEEEEchhcccchHhHHHHHHhCCCcC----CHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHH-HhHHHHHHHHHH
Confidence            689999999999999886 6776665311    1222333222334578899999999988887642 336677888888


Q ss_pred             HHHHHHHHH
Q 009673          383 CRALASRLV  391 (529)
Q Consensus       383 a~~l~~~L~  391 (529)
                      ++.+++.|.
T Consensus       285 ~~~~r~~l~  293 (294)
T cd00615         285 ALYARQEIN  293 (294)
T ss_pred             HHHHHHHHh
Confidence            888888775

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>PTZ00376 aspartate aminotransferase; Provisional

Probab=99.86  E-value=5e-20  Score=194.22  Aligned_cols=287  Identities=17%  Similarity=0.219  Sum_probs=177.5

Q ss_pred             HHHHHHHHHHHHHHHcC--CCCCCCceeee--cCChH-HHHHHHHH---hhcCCCCEEEEcCCCCCcccccccccccccc
Q 009673          146 IDELETLCQKRALAAFN--LDENKWGVNVQ--PLSGS-PANFEVYT---AILKPHDRIMGLDLPHGGHLSHGFMTPKRRV  217 (529)
Q Consensus       146 ~d~lE~~a~~~la~~~g--~~~~~~~~~V~--~~sGs-~A~~~~l~---all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i  217 (529)
                      ..++.+.+.+++.+..+  ++++    +|.  .+.|+ +|+..++.   ++++|||+|++++|.|.++..        .+
T Consensus        74 ~~~lR~aia~~~~~~~~~~~~~~----~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~--------~~  141 (404)
T PTZ00376         74 LQSFIEAAQKLLFGEASYALAEK----RIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVN--------IF  141 (404)
T ss_pred             CHHHHHHHHHHhcCCCccccccC----eEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HH
Confidence            34565555566654433  2343    333  35555 77666554   678999999999998765432        33


Q ss_pred             ccccceEEEEEcccC-CCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccc
Q 009673          218 SGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHI  289 (529)
Q Consensus       218 ~~~g~~~~~v~~~v~-~~~~~iD~d~le~~i~~~--~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~  289 (529)
                      ...|.  +++++++. ++++.+|++.+++.++..  +++++++++|+||+  ..   ++++|.++|++||+++|+|++ |
T Consensus       142 ~~~G~--~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~-Y  218 (404)
T PTZ00376        142 KSAGL--NVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMA-Y  218 (404)
T ss_pred             HHcCC--ceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehh-h
Confidence            45565  66777773 235889999999988642  34677778999997  33   577888899999999999998 5


Q ss_pred             cccccccc---cCC--CCC-cc--cEEEecccccc--cCCCCeEEE---eeCCCcchhHHHh----hhcccccCCCCCCC
Q 009673          290 SGLVAASV---VAD--PFK-YC--DVVTTTTHKSL--RGPRGGMIF---FKKDPVLGVELES----AINNAVFPGLQGGP  352 (529)
Q Consensus       290 ~Gli~~~~---~~~--~~~-~a--Div~~S~hK~l--~GprgG~i~---~~~~~~~~~~l~~----~i~~~~~p~~~g~p  352 (529)
                      .++.+.+.   ...  .+. ..  -++++|+||++  +|+|.||++   .++      ++.+    .+.+.......+.+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~  292 (404)
T PTZ00376        219 QGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANK------EEAANVLSQLKLIIRPMYSSPP  292 (404)
T ss_pred             cCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCH------HHHHHHHHHHHHHHhhhcCCCc
Confidence            55554321   100  011 11  27889999986  699999984   444      4333    22221111122222


Q ss_pred             hHHHHHHHHHHHHHhc--C---chHHHHHHHHHHHHHHHHHHHHhcCc----EEecCCCCCceEEEccCCCCCcHHHHHH
Q 009673          353 HNHTIGGLAVCLKHAQ--S---PEFKVYQNKVVSNCRALASRLVELGY----KLVSGGSDNHLVLVDLRPMGIDGARVEK  423 (529)
Q Consensus       353 ~~~~iaala~al~~~~--~---~~~~~~~~~i~~~a~~l~~~L~~~G~----~v~~~gt~~~~~~v~~~~~~i~~~~~~~  423 (529)
                      ...+. +.+.+++.-.  .   ...++..+++.++++.+.+.|.+.++    .+..+ ..+.+.|+++     +.+.++.
T Consensus       293 ~~~q~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p-~gg~f~~~~~-----~~~~~~~  365 (404)
T PTZ00376        293 IHGAR-IADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIIN-QIGMFSFTGL-----TKEQVER  365 (404)
T ss_pred             hHHHH-HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccc-CceEEEecCC-----CHHHHHH
Confidence            22222 2223342100  0   11234456778889999999988653    33332 2345666655     2355666


Q ss_pred             hHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          424 ILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       424 ~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +++++||.+    +||        + ||++..     .++++++++++.|++++.
T Consensus       366 L~~~~~v~v----~p~--------~-Ris~~~-----~~~~~~~~~~~~l~~~~~  402 (404)
T PTZ00376        366 LIEKYHIYL----LDN--------G-RISVAG-----LTSKNVDYVAEAIHDVVR  402 (404)
T ss_pred             HHHhCCEee----cCC--------C-eEEEec-----cCHHhHHHHHHHHHHHHh
Confidence            777889998    453        2 998743     457999999999998765

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.86  E-value=2e-19  Score=190.64  Aligned_cols=300  Identities=17%  Similarity=0.171  Sum_probs=193.7

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh---------cCCCCEEEEcCCCCCcccccccccccc
Q 009673          145 YIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---------LKPHDRIMGLDLPHGGHLSHGFMTPKR  215 (529)
Q Consensus       145 ~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al---------l~pGD~Vl~~~~~~~g~~s~g~~~~~~  215 (529)
                      ...++|    +.+++++|.+.     .+.++||++|+..++.++         ++|||+|++++++|.+...        
T Consensus        64 ~~~~fe----~~lA~~~g~~~-----~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~--------  126 (438)
T PRK15407         64 FNDAFE----KKLAEFLGVRY-----ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVN--------  126 (438)
T ss_pred             hHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHH--------
Confidence            456676    67888999874     355688999999988876         4899999999988755421        


Q ss_pred             ccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccc
Q 009673          216 RVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA  295 (529)
Q Consensus       216 ~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~  295 (529)
                      .+...|.  +++.++++++++.+|++++++.+++ ++++|++.++ .+...|+++|.++|+++|++||+|++|+.|..+.
T Consensus       127 ~v~~~G~--~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~~~-~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~  202 (438)
T PRK15407        127 PIIQNGL--VPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIAHT-LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYD  202 (438)
T ss_pred             HHHHcCC--EEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEeCC-CCChhhHHHHHHHHHHCCCEEEEECccchhhhcC
Confidence            3334454  7778888767789999999999987 8999888743 3335789999999999999999999999998765


Q ss_pred             cccCCCCCcccEEEeccc--ccccCCCCeEEEeeCCCcchhHHHhhhcccccCC--------------------------
Q 009673          296 SVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG--------------------------  347 (529)
Q Consensus       296 ~~~~~~~~~aDiv~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~--------------------------  347 (529)
                      +.....  ..|+.++|+|  |.++...||+++++++     ++.+++......+                          
T Consensus       203 g~~~G~--~gd~~~fSf~~~k~~~~geGG~l~t~d~-----~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (438)
T PRK15407        203 GRMTGT--FGDIATLSFYPAHHITMGEGGAVFTNDP-----LLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPF  275 (438)
T ss_pred             Ceeeec--cCceEEEeCCCCCCccccCceEEEECCH-----HHHHHHHHHHHhCcccccccccccccccccccccccccc
Confidence            532211  3588888887  6576556899999985     4443322110000                          


Q ss_pred             ---------CCCC-ChHH-HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-C-cEEec--CCCCC--ceEEEc
Q 009673          348 ---------LQGG-PHNH-TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-G-YKLVS--GGSDN--HLVLVD  410 (529)
Q Consensus       348 ---------~~g~-p~~~-~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G-~~v~~--~gt~~--~~~~v~  410 (529)
                               ..|. ..+. ..||+  ++.++  ..+++..++.+++++.+.+.|.+. + +.+..  ++...  +.+.+-
T Consensus       276 ~~~~~~~~~~~G~n~rmsel~AAi--g~~qL--~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~  351 (438)
T PRK15407        276 GYDHKYTYSHLGYNLKITDMQAAI--GLAQL--EKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPIT  351 (438)
T ss_pred             cccccccccccccccCccHHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEE
Confidence                     0010 0111 22332  23333  345677888888899999999763 3 22221  12211  222333


Q ss_pred             cCC-CCCcHHHHHHhHhcCCeEEcCCCC-CCCCCC-CC----------CC----eEE-EccCCCccCCCCHHHHHHHHHH
Q 009673          411 LRP-MGIDGARVEKILDMASITLNKNSV-PGDKSA-LV----------PG----GIR-IGSPAMTTRGFSEKEFVAIADF  472 (529)
Q Consensus       411 ~~~-~~i~~~~~~~~L~~~GI~v~~~~~-Pg~~~~-~~----------~~----~iR-ig~~~~tt~g~~~~d~~~la~~  472 (529)
                      +.. .+.+.+++.+.|.+.||.++..+. |-+..+ +.          |.    .-| |++|..  .+++++|++++++.
T Consensus       352 ~~~~~~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~--~~l~~~~v~~i~~~  429 (438)
T PRK15407        352 VKEDAGFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVY--PGLTEEMLDYVIEK  429 (438)
T ss_pred             ECCcCCCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCC--CCCCHHHHHHHHHH
Confidence            322 245678899999999998764432 222100 00          00    001 233322  35889999999999


Q ss_pred             HHHHHH
Q 009673          473 IHEGVE  478 (529)
Q Consensus       473 i~~~~~  478 (529)
                      |+++++
T Consensus       430 i~~~~~  435 (438)
T PRK15407        430 IEEFFG  435 (438)
T ss_pred             HHHHHh
Confidence            998774

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.86  E-value=1.1e-19  Score=189.61  Aligned_cols=320  Identities=12%  Similarity=0.083  Sum_probs=200.0

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCCC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH  192 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~pG  192 (529)
                      .+++-++++...+.+.+.        ++..+..+++|    +++++++|.+.     .+.+++|++|+.+++.++ ++||
T Consensus         9 ~~~~~~~~~~~~l~~~~~--------~g~~~~~~~~e----~~la~~~g~~~-----~v~~~sgt~al~~~l~~~~~~~G   71 (375)
T PRK11706          9 VVGTELDYIQQAMSSGKL--------CGDGGFTRRCQ----QWLEQRFGSAK-----VLLTPSCTAALEMAALLLDIQPG   71 (375)
T ss_pred             CCHHHHHHHHHHHHcCCc--------cCCCHHHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHhCCCCC
Confidence            344456666666654432        22124456666    67788899864     244567779988777766 7999


Q ss_pred             CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHH
Q 009673          193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMR  272 (529)
Q Consensus       193 D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~  272 (529)
                      |+|++++++|.+..        ..+...|.  +++.++++++++.+|++++++.+++ ++|+|++.++ ++...|+++|.
T Consensus        72 d~Viv~~~t~~~~~--------~~~~~~G~--~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~~~-~G~~~~~~~i~  139 (375)
T PRK11706         72 DEVIMPSYTFVSTA--------NAFVLRGA--KIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPVHY-AGVACEMDTIM  139 (375)
T ss_pred             CEEEECCCCcHHHH--------HHHHHcCC--EEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEeCC-CCCccCHHHHH
Confidence            99999998775442        13344565  7788888877788999999999987 8999887643 45578999999


Q ss_pred             HHHHHhCCEEEEecccccccccccccCCCCC-cccEEEeccc--ccccCCCCeEEEeeCCCcchhHHHhhhcccccCC--
Q 009673          273 QIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG--  347 (529)
Q Consensus       273 ~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~--  347 (529)
                      ++|+++|++||+|++|+.|....+.   ++. ..|+.++|+|  |.++...||+++++++     ++.+++......+  
T Consensus       140 ~la~~~~i~vIeD~a~a~g~~~~~~---~~g~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~-----~~~~~~~~~~~~g~~  211 (375)
T PRK11706        140 ALAKKHNLFVVEDAAQGVMSTYKGR---ALGTIGHIGCFSFHETKNYTAGEGGALLINDP-----ALIERAEIIREKGTN  211 (375)
T ss_pred             HHHHHcCCEEEEECccccccccCCe---eeecCcCEEEEeCCCCccccccCCeEEEECCH-----HHHHHHHHHHHcCCC
Confidence            9999999999999999888643321   222 3688888888  9986556676777654     5554432211100  


Q ss_pred             ---------------CCCC-Ch-HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc---C-cEEe--cCCC--
Q 009673          348 ---------------LQGG-PH-NHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL---G-YKLV--SGGS--  402 (529)
Q Consensus       348 ---------------~~g~-p~-~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~---G-~~v~--~~gt--  402 (529)
                                     ..|. .. ....+++.  +.++  ..+++..++..++++.+.+.|.+.   | +.+.  .++.  
T Consensus       212 ~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~--~~ql--~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~  287 (375)
T PRK11706        212 RSQFFRGQVDKYTWVDIGSSYLPSELQAAYL--WAQL--EAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKH  287 (375)
T ss_pred             cchhhccCCCcceeeecccccCcCHHHHHHH--HHHH--HHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCce
Confidence                           0111 11 12233322  2222  234556667777778888888663   2 3322  1111  


Q ss_pred             CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCC-CC---------CC----eEE-EccCCCccCCCCHHHHH
Q 009673          403 DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSA-LV---------PG----GIR-IGSPAMTTRGFSEKEFV  467 (529)
Q Consensus       403 ~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~-~~---------~~----~iR-ig~~~~tt~g~~~~d~~  467 (529)
                      ..+++++.+.. +.+.+++.+.|.++||.+...+.|.+..+ +.         +.    .=| +++|..  ..++++|++
T Consensus       288 ~~~~~~~~~~~-~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~--~~l~~~~~~  364 (375)
T PRK11706        288 NAHMFYIKLRD-LEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLF--YNLTDVEQR  364 (375)
T ss_pred             eeEEEEEEECC-cCCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCC--CCCCHHHHH
Confidence            12344444432 34678899999999999875544533211 00         00    001 233322  358899999


Q ss_pred             HHHHHHHHHH
Q 009673          468 AIADFIHEGV  477 (529)
Q Consensus       468 ~la~~i~~~~  477 (529)
                      ++++.|++++
T Consensus       365 ~i~~~i~~~~  374 (375)
T PRK11706        365 TVIDTILEFF  374 (375)
T ss_pred             HHHHHHHHHh
Confidence            9999998764

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.86  E-value=1.4e-19  Score=186.52  Aligned_cols=325  Identities=15%  Similarity=0.128  Sum_probs=213.1

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCC-CCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCC
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP  191 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~-~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~p  191 (529)
                      ..|..|++++..++.+-.+.|... .......++.+.++ .+++.++++|+.+.+ +.+.+...|||.|+.+++..++.+
T Consensus         2 ~~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~-~~~~~l~~l~~~~~~-~~v~~~~gsgT~a~ea~~~nl~~~   79 (349)
T TIGR01364         2 ALPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVAN-EAESDLRELLNIPDN-YEVLFLQGGATGQFAAVPLNLLAE   79 (349)
T ss_pred             CCCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHH-HHHHHHHHHhCCCCC-ceEEEEcCCchHHHHHHHHhcCCC
Confidence            368899999998876422222110 11122445555555 567999999998433 224455566889999999999999


Q ss_pred             CCEEEEcCCCCCccccccccccccccccccceEEEEEcccC-CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCH
Q 009673          192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDY  268 (529)
Q Consensus       192 GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~-~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~  268 (529)
                      ||++++....   .+++.+.   ......|. ...+..+-. +....+|+++++  +++ ++++|.+.+..+++  ..+ 
T Consensus        80 ~~~~l~i~~G---~fg~r~~---~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~v~~th~ETstGv~~~-  148 (349)
T TIGR01364        80 GKVADYIVTG---AWSKKAA---KEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISE-DAAYVHYCANETIHGVEFR-  148 (349)
T ss_pred             CCeEEEEECC---HHHHHHH---HHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCC-CCCEEEEcCCCCcccEecc-
Confidence            9999988643   3333332   12233454 344342211 122356777665  334 78999887655544  333 


Q ss_pred             HHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccc---
Q 009673          269 PRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAV---  344 (529)
Q Consensus       269 ~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~---  344 (529)
                          ++++.+++++++|++++.|....++     +..|++++|.||+| ||.| |+++++++      ..++++...   
T Consensus       149 ----~l~~~~~~l~iVDavss~g~~~id~-----~~~d~~~~ssqK~l-gP~Glg~l~~s~~------~~~~~~~~~~~~  212 (349)
T TIGR01364       149 ----ELPDVKNAPLVADMSSNILSRPIDV-----SKFGLIYAGAQKNI-GPAGLTVVIVRKD------LLGRASRITPSM  212 (349)
T ss_pred             ----eecccCCCeEEEEccccccCccCCH-----HHccEEEEeccccc-CCCceEEEEECHH------HHhhcccCCCCc
Confidence                6777789999999999888764332     23579999999998 6998 99999883      333221110   


Q ss_pred             --------cCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhc-CcEEecC--CCCC-ceEEEcc
Q 009673          345 --------FPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVEL-GYKLVSG--GSDN-HLVLVDL  411 (529)
Q Consensus       345 --------~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~--gt~~-~~~~v~~  411 (529)
                              .....|+|+.+.+.++..+|+.+... ++++..++..+.++++.+.|++. |+.....  ...+ ....+.+
T Consensus       213 ~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~  292 (349)
T TIGR01364       213 LNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTL  292 (349)
T ss_pred             chHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEec
Confidence                    01123799999999999999998877 68999999999999999999997 6644421  1112 1223333


Q ss_pred             CCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          412 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       412 ~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ....+ ..++.+.+.+.||.+    .+|..   ..+.+|+|+..+++    ++|++++.++|+++++
T Consensus       293 ~~~~~-~~~~~~~~~~~Gi~~----~~~~~---~~g~vRvS~~~~nt----~edid~l~~al~~~~~  347 (349)
T TIGR01364       293 GNEEL-EKRFLKEAEERGLVS----LKGHR---SVGGMRASIYNAMP----LEGVQALVDFMKEFQK  347 (349)
T ss_pred             CChhH-hHHHHHHHHHCCCcc----cCCcc---ccCeeEEECcCCCC----HHHHHHHHHHHHHHHH
Confidence            32222 245556778899944    23322   24689999876654    8999999999998664

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.86  E-value=3.6e-20  Score=191.82  Aligned_cols=328  Identities=15%  Similarity=0.119  Sum_probs=203.1

Q ss_pred             eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCC-CCCCC---chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHH
Q 009673          105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGG---NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA  180 (529)
Q Consensus       105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~-r~~~g---~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A  180 (529)
                      ++++++...+|+.|++|+..++.+ |.  .++. .|..+   .++.+.++ .+++.++++||++.++ .+.+...|||++
T Consensus         1 ~~~~pGp~~~p~~V~~a~~~~~~~-~~--~~~rg~~~~~~r~~~~~~~~~-~~r~~l~~l~~~~~~~-~vvf~~gs~T~a   75 (355)
T cd00611           1 INFSAGPAALPEEVLEQAQKELLD-FN--GLGMSVMEMSHRSKDFEAIVN-EAESDLRELLNIPDNY-KVLFLQGGATGQ   75 (355)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHhh-cc--cCCccccccCCCCHHHHHHHH-HHHHHHHHHhCCCCCc-eEEEEcCCchHH
Confidence            467888999999999999988744 32  2221 11112   34445555 5789999999984322 132333447799


Q ss_pred             HHHHHHhhcC---CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCC-HHHHHHHhhhcCCcEEE
Q 009673          181 NFEVYTAILK---PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD-YDMLEKTAILFRPKLII  256 (529)
Q Consensus       181 ~~~~l~all~---pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD-~d~le~~i~~~~pklIi  256 (529)
                      +.+++.+++.   +||.|+.-      .+.+.+.   ......|.  ++..++.+.+....+ .+..+..+++ ++++|.
T Consensus        76 ~~~~~~~l~~~~~~~~~i~~g------~~~~~~~---~~a~~~g~--~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~lV~  143 (355)
T cd00611          76 FAAVPLNLLGDKGTADYVVTG------AWSAKAA---KEAKRYGG--VVVIVAAKEEGKYTKIPDVETWDLAP-DAAYVH  143 (355)
T ss_pred             HHHHHHhcCCCCCeEEEEECC------HHHHHHH---HHHHhcCC--CcEEEecccccCCCCCCCHhhcCCCC-CCCEEE
Confidence            9999999987   55555432      1222110   01122243  333333432211223 2222233444 789998


Q ss_pred             EcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhH
Q 009673          257 AGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVE  335 (529)
Q Consensus       257 ~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~  335 (529)
                      +++..+.+-..+   .++++.+|+++++|++|++|....++.     ..|++++|.||+| ||.| |+++++++      
T Consensus       144 ~~h~~t~tG~~~---~~i~~~~g~~~~VDa~qs~g~~~idv~-----~~~~~~ss~~K~l-GP~G~g~l~~~~~------  208 (355)
T cd00611         144 YCSNETIHGVEF---DEVPDTGGVPLVADMSSNILSRPIDVS-----KFGVIYAGAQKNL-GPAGVTVVIVRKD------  208 (355)
T ss_pred             EeCCcccccEEc---ceecccCCCeEEEEccccccCCCCCHH-----HhCEEEeeccccc-CCCceEEEEECHH------
Confidence            876555541112   245566999999999999987644332     2456777799987 7998 99999883      


Q ss_pred             HHhhhccc-----------ccCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhc-CcE-EecC-
Q 009673          336 LESAINNA-----------VFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVEL-GYK-LVSG-  400 (529)
Q Consensus       336 l~~~i~~~-----------~~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~-G~~-v~~~-  400 (529)
                      +.+++...           ......|+|+.+.+.++..+++.+... +++...++..+.++++.+.|.+. |+. ...+ 
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~  288 (355)
T cd00611         209 LLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDK  288 (355)
T ss_pred             HHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCH
Confidence            33322210           001125799999999999999998877 68999999999999999999996 852 2111 


Q ss_pred             CCCCceEEEccCCCCC-cHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          401 GSDNHLVLVDLRPMGI-DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       401 gt~~~~~~v~~~~~~i-~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      ..... .++.+...++ ...+....+.+.|+.+    .+++.   ..+.+|+|+..++|    ++|++++.++|+++
T Consensus       289 ~~rs~-~vvsf~~~~~~l~~~~~~~~~r~G~~~----~~~~~---~~g~vR~S~~~~nt----~edi~~l~~al~~~  353 (355)
T cd00611         289 RARSR-MNVPFRLGKEELEKEFLKEAEAAGMIG----LKGHR---SVGGIRASIYNALS----LEGVQALADFMKEF  353 (355)
T ss_pred             HHcCc-eEEEEEcCChhhhHHHHHHHHHCCCcc----cCCCc---ccCeEEEEccCCCC----HHHHHHHHHHHHHH
Confidence            11121 2233332232 1134445677789964    23332   23689999977665    89999999999874

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=99.85  E-value=1.9e-19  Score=190.54  Aligned_cols=345  Identities=14%  Similarity=0.090  Sum_probs=202.1

Q ss_pred             cceeEecCCCC-C---cHHHHHHHhhhhhcc-CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673          103 KSLELIASENF-T---SRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG  177 (529)
Q Consensus       103 ~~i~L~asen~-~---~~~V~eal~~~l~~~-y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG  177 (529)
                      +.|+|..+... .   .+.+.+++...+... +..   ....|+......++.+.+.+++.+.+|.+.+.  -+|.+++|
T Consensus        31 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~--~~I~it~G  105 (416)
T PRK09440         31 GAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTE---ALGNYDGPQGKDELIEALAALLNERYGWNISP--QNIALTNG  105 (416)
T ss_pred             CceeccCCCCCccCCHHHHHHHHHHHHhcCccccc---ccccCCCCCCCHHHHHHHHHHHHHHhCCCCCh--hhEEEccC
Confidence            45888765432 2   235666666554321 100   00112222223456656668888777765321  36778999


Q ss_pred             H-HHHHHHHHhhcC-----CCCEEEE-cCCCCCccccccccccccccccccceEEEEEcccCCC--CCCCCHHHHHHHhh
Q 009673          178 S-PANFEVYTAILK-----PHDRIMG-LDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAI  248 (529)
Q Consensus       178 s-~A~~~~l~all~-----pGD~Vl~-~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~--~~~iD~d~le~~i~  248 (529)
                      + +|+..++.++++     |||.|++ .+|+|.++.....  .. . .+.+....+++  ++.+  .+.+|+++++  +.
T Consensus       106 a~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~--~~-~-~~~~~~~~~~~--~~~~~~~~~~d~~~l~--~~  177 (416)
T PRK09440        106 SQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGL--EE-D-LFVSYRPNIEL--LPEGQFKYHVDFEHLH--ID  177 (416)
T ss_pred             hHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhh--cc-C-ceeeccccccc--ccccccccCCCHHHcc--cC
Confidence            8 899989999885     6999999 6998866532110  00 0 01111112222  3322  3579999997  34


Q ss_pred             hcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCC--CC-CcccEEEeccccc-ccCC
Q 009673          249 LFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PF-KYCDVVTTTTHKS-LRGP  319 (529)
Q Consensus       249 ~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~-~~aDiv~~S~hK~-l~Gp  319 (529)
                      . +++++++++|+||+  ..   .+++|.++|+++|++||+|+++... ........  +. ..--|+++|++|+ ++|+
T Consensus       178 ~-~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~-~~~~~~~~~~~~~~~~vI~~~SfSK~~~pGl  255 (416)
T PRK09440        178 E-DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPP-FPGIIFSEATPLWNPNIILCMSLSKLGLPGV  255 (416)
T ss_pred             C-CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCcccc-CCCcchhhcCccccCCeEEEecccccCCCcc
Confidence            4 78999999999997  34   4778888999999999999996421 10000000  00 1112778999997 4899


Q ss_pred             CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHH-----HHHHHHHHHHHHHHHHHh--
Q 009673          320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV-----YQNKVVSNCRALASRLVE--  392 (529)
Q Consensus       320 rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~-----~~~~i~~~a~~l~~~L~~--  392 (529)
                      |.||+++++      ++.+++.........+.+...+.++ +.++.   ..++..     ..+.+.++++.+.+.|.+  
T Consensus       256 RiG~~i~~~------~l~~~~~~~~~~~~~~~s~~~q~~~-~~~l~---~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l  325 (416)
T PRK09440        256 RCGIVIADE------EIIEALSNMNGIISLAPGRLGPAIA-AEMIE---SGDLLRLSETVIRPFYRQKVQLAIALLRRYL  325 (416)
T ss_pred             eEEEEeCCH------HHHHHHHHHHHHhccCCCcHHHHHH-HHHhc---cchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999987      6777665433222222223333332 23343   222321     334455666777777765  


Q ss_pred             --cCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCC--CCCCC--CCCCeEEEccCCCccCCCCHHHH
Q 009673          393 --LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVP--GDKSA--LVPGGIRIGSPAMTTRGFSEKEF  466 (529)
Q Consensus       393 --~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~P--g~~~~--~~~~~iRig~~~~tt~g~~~~d~  466 (529)
                        .++.+..+ ..+.++|+++...+++..++.+.|.++||.+.++...  +....  ...+++||++.      .+++++
T Consensus       326 ~~~~~~~~~p-~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~------~~~~~l  398 (416)
T PRK09440        326 PDEPCLIHKP-EGAIFLWLWFKDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYV------QDDEEI  398 (416)
T ss_pred             ccCCeEEecC-CCceEEEEECCCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEec------CCHHHH
Confidence              24454433 2356778888643456677778888999999654321  11000  01358999964      247999


Q ss_pred             HHHHHHHHHHHHH
Q 009673          467 VAIADFIHEGVEI  479 (529)
Q Consensus       467 ~~la~~i~~~~~~  479 (529)
                      ++..+.|.+++..
T Consensus       399 ~~~i~~l~~~~~~  411 (416)
T PRK09440        399 EKGIAILAEEVEK  411 (416)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999888764

>PRK05968 hypothetical protein; Provisional

Probab=99.85  E-value=5.7e-20  Score=192.38  Aligned_cols=290  Identities=17%  Similarity=0.138  Sum_probs=190.8

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++...++|    +.+++++|.+.     .+.++||+.|+..++.++++|||+|++..+.|++.+...    ...+...|
T Consensus        61 ~~p~~~~le----~~lA~l~g~~~-----av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~----~~~~~~~G  127 (389)
T PRK05968         61 DNPTVRAFE----EMLAKLEGAED-----ARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLF----ETILKRMG  127 (389)
T ss_pred             CChhHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHH----HHHHHHcC
Confidence            345567777    67889999975     245689999999999999999999999998877653211    01122334


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  +++.++.      .|++++++.+ + ++|+|++.+|.++.  ..|+++|.++|+++|+++++|++|..+...     
T Consensus       128 ~--~v~~vd~------~d~~~l~~~i-~-~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~-----  192 (389)
T PRK05968        128 V--EVDYVDG------RDEEAVAKAL-P-GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQ-----  192 (389)
T ss_pred             c--eEEEeCC------CCHHHHHHhc-c-cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhcc-----
Confidence            3  5555432      2889999888 4 68999998877776  579999999999999999999998665421     


Q ss_pred             CCCC-cccEEEecccccccCC---CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      .|+. ++|++++|+||++.||   ++|+++.++      ++.+++.....+...+..+. ..+++  .+..+  ..+..+
T Consensus       193 ~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~------~~~~~l~~~~~~~~g~~~~~-~~A~~--~l~~L--~tl~~r  261 (389)
T PRK05968        193 RPITLGVDLVIHSASKYLGGHSDTVAGVVAGSK------EHIARINAEAYPYLGAKLSP-FEAWL--LLRGL--RTLPLR  261 (389)
T ss_pred             CchhcCCcEEEeeccccccCCCCeEEEEEEECH------HHHHHHHHHHHHhCCCCCCh-HHHHH--HHccc--CcHHHH
Confidence            2333 6899999999999875   468888776      56666554322222122221 22221  23322  234677


Q ss_pred             HHHHHHHHHHHHHHHHh-cCcEEec-CCCCC----------ceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCC-----C
Q 009673          376 QNKVVSNCRALASRLVE-LGYKLVS-GGSDN----------HLVLVDLRPMGIDGARVEKILDMASITLNKNSV-----P  438 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~-~G~~v~~-~gt~~----------~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~-----P  438 (529)
                      .++..++++.+.+.|++ .++..+. ++..+          .++.+++.. +.+..++.+.|+..++.++.+..     |
T Consensus       262 ~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~-~~~~~~f~~~L~~~~~~~s~G~~~slv~p  340 (389)
T PRK05968        262 MKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE-GIDVRAFADALKLFRLGVSWGGHESLVVP  340 (389)
T ss_pred             HHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECC-HHHHHHHHHhCCccEEecCCCCCCceeee
Confidence            88888999999999988 4664443 32111          244455542 33455677778777777765421     3


Q ss_pred             CCCC-----------C--CCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          439 GDKS-----------A--LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       439 g~~~-----------~--~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      ....           .  ..++-||+|+..        |+.+.+.+-|.+++..
T Consensus       341 ~~~~~~~~~~~~~~~~~gi~~~liR~SvGl--------E~~~dl~~dl~~al~~  386 (389)
T PRK05968        341 AEVVLQQKAQPNSAARFGVSPRSVRLHVGL--------EGTEALWADLEQALAA  386 (389)
T ss_pred             CcccccccCCHHHHHhcCCCCCeEEEEecc--------CCHHHHHHHHHHHHHH
Confidence            2110           0  114579998653        5677777777777653

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=99.85  E-value=2.8e-19  Score=183.79  Aligned_cols=303  Identities=17%  Similarity=0.168  Sum_probs=200.6

Q ss_pred             hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC---CCCCCCceeeecCC
Q 009673          102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN---LDENKWGVNVQPLS  176 (529)
Q Consensus       102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g---~~~~~~~~~V~~~s  176 (529)
                      .+.|+|..++|+  +|+.+++++...+.......||.      . ...+++    +.+++.++   ++++    +|.+++
T Consensus        19 ~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~------~-~~~~Lr----~aia~~~~~~~~~~~----~i~it~   83 (335)
T PRK14808         19 RDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYD------S-PDEELI----EKILSYLDTDFLSKN----NVSVGN   83 (335)
T ss_pred             CceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC------C-ChHHHH----HHHHHHhCCCCCCcc----eEEEcC
Confidence            366889888874  68899999887654221111222      1 134454    44555555   6554    577799


Q ss_pred             hH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673          177 GS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI  255 (529)
Q Consensus       177 Gs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI  255 (529)
                      |+ +++..++.++    |.|++++|.|.++.        ..+...|.  +++.+++++ ++.+|.+.    + . ++++|
T Consensus        84 Ga~~~i~~~~~~~----d~v~v~~P~y~~~~--------~~~~~~g~--~~~~v~~~~-~~~~~~~~----~-~-~~~~i  142 (335)
T PRK14808         84 GADEIIYVMMLMF----DRSVFFPPTYSCYR--------IFAKAVGA--KFLEVPLTK-DLRIPEVN----V-G-EGDVV  142 (335)
T ss_pred             CHHHHHHHHHHHh----CcEEECCCCHHHHH--------HHHHHcCC--eEEEecCCC-cCCCChhH----c-c-CCCEE
Confidence            98 8998888877    78999998765442        23445665  666777763 45555332    2 2 57899


Q ss_pred             EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-c-ccEEEecccccc--cCCCCeEEEeeCC
Q 009673          256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-Y-CDVVTTTTHKSL--RGPRGGMIFFKKD  329 (529)
Q Consensus       256 i~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~-aDiv~~S~hK~l--~GprgG~i~~~~~  329 (529)
                      ++++|+||+  ..+.+++.+|+ +++++||+|+++. .+.. ......+. . --+++.|++|++  +|+|.||+++++ 
T Consensus       143 ~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~-~f~~-~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~-  218 (335)
T PRK14808        143 FIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYY-EFHG-ESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSE-  218 (335)
T ss_pred             EEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchh-hhcC-CchHHHHHhCCCEEEEEechhhccCcccceEEEEeCH-
Confidence            999999997  77888999998 5799999999853 3321 11111111 1 127889999986  599999999987 


Q ss_pred             CcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEE
Q 009673          330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV  409 (529)
Q Consensus       330 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v  409 (529)
                           ++.+.+.....+  .+.....+.++ ..+++.  ...+++..+.+.++++.+.+.|++.|+.+..+  +..++|+
T Consensus       219 -----~~~~~l~~~~~~--~~~~~~~q~a~-~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~--~g~f~~~  286 (335)
T PRK14808        219 -----KFIDAYNRVRLP--FNVSYVSQMFA-KVALDH--REIFEERTKFIVEERERMKSALREMGYRITDS--RGNFVFI  286 (335)
T ss_pred             -----HHHHHHHHhcCC--CCCCHHHHHHH-HHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC--CCeEEEE
Confidence                 677777654422  22223333333 334542  12346667778888889999999888886654  3456677


Q ss_pred             ccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          410 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       410 ~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      .+.  +.+..++.+.|.++||.|..  .        ..++||++.       +.++++++.+.|++
T Consensus       287 ~l~--~~~~~~~~~~l~~~Gi~V~~--~--------~~~~Risi~-------~~~~~~~~~~~l~~  333 (335)
T PRK14808        287 FME--KEEKERLLEHLRAKNIAVRS--F--------REGVRITIG-------KREENDMILKELEV  333 (335)
T ss_pred             eCC--CccHHHHHHHHHHCCeEEEE--C--------CCCeEEecC-------CHHHHHHHHHHHHh
Confidence            664  23456788889999999963  1        257999863       36899999988864

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=99.85  E-value=2e-19  Score=186.51  Aligned_cols=327  Identities=12%  Similarity=0.045  Sum_probs=209.4

Q ss_pred             eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 009673          105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV  184 (529)
Q Consensus       105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~  184 (529)
                      ..+++++..++++|++++......-.   +.+.|   +.++.+.++ .+++.+++++|++.+ +.+.+...|||.++.++
T Consensus         5 ~~f~pGP~~~~~~v~~a~~~~~~~~~---~~~hr---~~~f~~~~~-~~r~~l~~l~~~~~~-~~v~f~~gs~T~a~~~~   76 (361)
T TIGR01366         5 GRFGSGPSKVRLEQLQALTTTAASLF---GTSHR---QAPVKNLVG-RVREGLAELFSLPDG-YEVILGNGGATAFWDAA   76 (361)
T ss_pred             CcccCCCcCCCHHHHHHHHhcCcccc---ccCcC---ChHHHHHHH-HHHHHHHHHhCCCCC-ceEEEECCchhHHHHHH
Confidence            45778888999999999874210000   11222   345566666 578999999999643 21222235578999999


Q ss_pred             HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC-
Q 009673          185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP-  263 (529)
Q Consensus       185 l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p-  263 (529)
                      +.+++.+ +.+++..-.++..+.|..    +.....+ ..+.+.  ++ ++..++.     .+.+ ++++|++++..+. 
T Consensus        77 ~~~l~~~-~~l~i~~G~~~~~~~~~a----~~~~~~~-~~~~~~--~~-~~~~~~~-----~~~~-~~~lV~~~h~et~t  141 (361)
T TIGR01366        77 TFGLIEK-KSLHLSFGEFSSKFAKAV----KLAPWLG-EPIIVT--AD-PGSAPEP-----QADP-GVDVIAWAHNETST  141 (361)
T ss_pred             HHhcccc-cccEEecCHHHHHHHHHH----HhhhccC-CceEEe--cC-CCCCCCC-----ccCC-CCCEEEEcccCCcc
Confidence            9998743 222222222222211111    0000111 123333  33 2333443     2334 7899988854443 


Q ss_pred             -CCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhc
Q 009673          264 -RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN  341 (529)
Q Consensus       264 -~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~  341 (529)
                       ...|+++|   ++++|+++++|+++++|....++     +.+|++++|.||+|.+|.| ++++.+++      +.+++.
T Consensus       142 G~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv-----~~~D~~~~s~~K~lg~~~Gl~~~~~s~~------~~~~~~  207 (361)
T TIGR01366       142 GVAVPVRRP---EGSDDALVVIDATSGAGGLPVDI-----AETDVYYFAPQKNFASDGGLWLAIMSPA------ALERIE  207 (361)
T ss_pred             ceecccccc---cccCCCeEEEEcCccccCCCCCH-----HHCCEEEEEchhhcCCCCceEEEEECHH------HHhhhh
Confidence             37888776   58899999999999988764432     2379999999999977766 55566663      222221


Q ss_pred             --------------------ccccCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcC-cEEec
Q 009673          342 --------------------NAVFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG-YKLVS  399 (529)
Q Consensus       342 --------------------~~~~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G-~~v~~  399 (529)
                                          ...-.+..++|+...+.++..+++.+... +++...++..+.++++.+.|.+.+ ++++.
T Consensus       208 ~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~  287 (361)
T TIGR01366       208 AIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFV  287 (361)
T ss_pred             cccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCC
Confidence                                11112446788888888999999988766 478888999999999999999976 45543


Q ss_pred             CCC--CC-ceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          400 GGS--DN-HLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       400 ~gt--~~-~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      ...  .+ ....+.+ +.+++..++.+.|+++||.+....     ..+..+.+|||+..++|    ++|+++++++|+++
T Consensus       288 ~~~~~~s~~v~~v~~-~~g~~~~~v~~~L~~~gI~i~~~~-----~~l~~~~vRis~~~~~t----~~di~~l~~al~~~  357 (361)
T TIGR01366       288 TDPGKRSQVVGTIDF-VDDIDAATVAKILRANGIVDTEPY-----RKLGRNQLRVAMFPAID----PDDVEALTECVDWV  357 (361)
T ss_pred             CChhhcccceEEEEC-CCccCHHHHHHHHHHCCCeeccCc-----cccCCCcEEEEcCCCCC----HHHHHHHHHHHHHH
Confidence            211  11 1234455 367888889999998999984321     12334679999987655    89999999999987


Q ss_pred             HH
Q 009673          477 VE  478 (529)
Q Consensus       477 ~~  478 (529)
                      ++
T Consensus       358 ~~  359 (361)
T TIGR01366       358 VE  359 (361)
T ss_pred             Hh
Confidence            65

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.85  E-value=1.1e-19  Score=190.20  Aligned_cols=291  Identities=16%  Similarity=0.133  Sum_probs=187.5

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..+++|    +.+++++|.+.     .|.+.||+.|+..++.++++|||+|+++++.|++.+....    ......|
T Consensus        59 ~~pt~~~Le----~~lA~l~G~~~-----al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~----~~~~~~g  125 (386)
T PRK06767         59 GNPTVKLFE----ERMAVLEGGEE-----ALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLE----VLEEKFM  125 (386)
T ss_pred             CCcchHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHH----HHHhhcC
Confidence            345567777    67889999764     3567899999999999999999999999987765532110    0001112


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                        +++..++      ..|++++++++++ ++++|++++++||+  ..|+++|.++|+++|+++++|++|..+..     .
T Consensus       126 --i~~~~~~------~~d~~~l~~~i~~-~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~-----~  191 (386)
T PRK06767        126 --ITHSFCD------METEADIENKIRP-NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYL-----Q  191 (386)
T ss_pred             --eEEEEeC------CCCHHHHHHhhCc-CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence              2222221      3488999999987 89999999999887  78999999999999999999999765432     2


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      .|+. ++|++++|++|++.|+.   ||++++++      ++.+++.........+.... ..+++  ++..+.  ....+
T Consensus       192 ~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~------~~i~~~~~~~~~~~g~~~~~-~~a~l--~~~~L~--tl~~r  260 (386)
T PRK06767        192 RPLELGCDAVVHSATKYIGGHGDVVAGVTICKT------RALAEKIRPMRKDIGGIMAP-FDAWL--LLRGLK--TLAVR  260 (386)
T ss_pred             CchhcCCcEEEecCcceecCCCCceeEEEEeCh------HHHHHHHHHHHHHhCCCCCH-HHHHH--HHcCCC--cHHHH
Confidence            2343 78999999999997754   69999987      44433221111111111111 11221  222221  33567


Q ss_pred             HHHHHHHHHHHHHHHHh-cCcEEec-CCC---------CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCC------CC
Q 009673          376 QNKVVSNCRALASRLVE-LGYKLVS-GGS---------DNHLVLVDLRPMGIDGARVEKILDMASITLNKNS------VP  438 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~-~G~~v~~-~gt---------~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~------~P  438 (529)
                      .++..++++.+++.|++ +++..+. +..         .+.++.+++.....+...+.+.|+..++.++.+.      .|
T Consensus       261 ~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p  340 (386)
T PRK06767        261 MDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHP  340 (386)
T ss_pred             HHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCC
Confidence            78889999999999998 4776432 211         1234555554211234557777777888776542      13


Q ss_pred             CCCC--C----------CCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          439 GDKS--A----------LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       439 g~~~--~----------~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ...+  .          ..++-||+++.        -||.+.+.+-|.+++.
T Consensus       341 ~~~~~~~~~~~~~~~~gi~~~l~R~svG--------lE~~~dl~~dl~~al~  384 (386)
T PRK06767        341 ATMTHAAIPAELRQEMGIYDNLIRLSVG--------LESWEDIVSDLEQALK  384 (386)
T ss_pred             CccccccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHHHh
Confidence            2210  0          12356898864        3677777777777664

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.85  E-value=2e-19  Score=188.35  Aligned_cols=218  Identities=19%  Similarity=0.179  Sum_probs=153.2

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..+++|    +++++++|.+.     .+.++||+.|+..++.++++|||+|+++++.|++.+...    ...+...|
T Consensus        57 ~~p~~~~le----~~lA~l~g~~~-----av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~----~~~~~~~G  123 (391)
T TIGR01328        57 GNPTVSNLE----GRIAFLEGTEA-----AVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALL----EHALTKFG  123 (391)
T ss_pred             CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHH----HHHHhcCC
Confidence            345677777    67899999876     356689999999999999999999999998776543211    01122334


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  ++..++++      |++++++.+++ ++++|+++.++||+  ..|+++|.++|+++|+++++|++|..+..     .
T Consensus       124 ~--~~~~vd~~------d~e~l~~~i~~-~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~-----~  189 (391)
T TIGR01328       124 I--QVDFINMA------IPEEVKAHIKD-NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPML-----T  189 (391)
T ss_pred             e--EEEEECCC------CHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhcc-----C
Confidence            3  55565442      78999999987 89999999888886  77999999999999999999999876543     2


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      .++. ++|++++|++|+++|+.   ||+++.++      ++.+++.........|+......+++  +++.+  ..+..+
T Consensus       190 ~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~------~li~~l~~~~~~~~~g~~l~~~~a~l--~l~~L--~tl~~r  259 (391)
T TIGR01328       190 NPVALGVDVVVHSATKYIGGHGDVVAGLICGKA------ELLQQIRMVGIKDMTGSVISPFDAWL--ILRGL--KTLNIR  259 (391)
T ss_pred             CchhcCCCEEEccccccccCCCCceEEEEEcCH------HHHHHHHHHHHHhCCCCCCCcHHHHH--HHhCc--CcHHHH
Confidence            2343 79999999999997643   68888776      66665543211111222121122222  23322  234567


Q ss_pred             HHHHHHHHHHHHHHHHh-cCcE
Q 009673          376 QNKVVSNCRALASRLVE-LGYK  396 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~-~G~~  396 (529)
                      +++..+|++.+.+.|++ +++.
T Consensus       260 ~~~~~~na~~la~~L~~~p~v~  281 (391)
T TIGR01328       260 MKRHSENAMKVAEYLKSHPAVE  281 (391)
T ss_pred             HHHHHHHHHHHHHHHHhCCCcc
Confidence            88889999999999988 4443

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=99.84  E-value=5e-19  Score=182.11  Aligned_cols=306  Identities=17%  Similarity=0.127  Sum_probs=198.8

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.|+|..++|+  +|+.+++++.+.+......+||.    .|   ..+++    +.+++++|++++    +|.+++|+ +
T Consensus        19 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~----~g---~~~lr----~~ia~~~~~~~~----~I~~t~G~~~   83 (337)
T PRK03967         19 YRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPH----IT---SDPLR----EAIAEFYGLDAE----NIAVGNGSDE   83 (337)
T ss_pred             ceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCC----CC---HHHHH----HHHHHHhCcCcc----eEEEcCCHHH
Confidence            45788777765  57889999887664221123432    11   23333    667788888875    56678988 7


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      ++..++.++  +||+|++++|.|+.+.        ......|.  ++++++++ +++.+|++.+++.+ . +++++++++
T Consensus        84 ~l~~~~~~~--~gd~V~v~~P~y~~~~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~-~-~~~~v~~~~  148 (337)
T PRK03967         84 LISYLVKLF--EGKHIVITPPTFGMYS--------FYAKLNGI--PVIDVPLK-EDFTIDGERIAEKA-K-NASAVFICS  148 (337)
T ss_pred             HHHHHHHHh--CCCeEEEeCCChHHHH--------HHHHHcCC--eEEEeecC-CCCCcCHHHHHHhc-c-CCCEEEEeC
Confidence            777666655  8999999999775321        12234454  66677666 35789999998865 3 688998889


Q ss_pred             CCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-c-ccEEEecccccc--cCCCCeEEEeeCCCcch
Q 009673          260 SAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPVLG  333 (529)
Q Consensus       260 s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~-aDiv~~S~hK~l--~GprgG~i~~~~~~~~~  333 (529)
                      |+||+  ..+.++|.++++ +|+++|+|+++. .+.... ....+. . --+++.|++|++  +|.|.||+++++     
T Consensus       149 P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~-~~~~~~-~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~-----  220 (337)
T PRK03967        149 PNNPTGNLQPEEEILKVLE-TGKPVVLDEAYA-EFSGKS-LIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANE-----  220 (337)
T ss_pred             CCCCCCCCCCHHHHHHHHh-cCCEEEEECchh-hhcccc-hHHHHhhCCCEEEEecchHhhcchhhhheeeecCH-----
Confidence            99997  778899999995 799999999854 332111 000011 1 127889999986  789999999987     


Q ss_pred             hHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCC
Q 009673          334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP  413 (529)
Q Consensus       334 ~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~  413 (529)
                       ++.+.+.....+.  +. +.....++..+++.  .+.+.+..+.+.++++.+.+.|.+..   ..  ....++|+++. 
T Consensus       221 -~~i~~~~~~~~~~--~~-~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~---~~--~~~~~~~~~~~-  288 (337)
T PRK03967        221 -EIIDALYRIKPPF--SL-NILTMKIVRLALDH--YDLIEERIDYIIKERERVRRELGEYA---YP--SDANFLLLKLD-  288 (337)
T ss_pred             -HHHHHHHhhcCCC--CC-CHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHhccCc---CC--CCCcEEEEhHH-
Confidence             6777776544332  22 22222233334432  12335556667777888888886542   22  23456666542 


Q ss_pred             CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          414 MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       414 ~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                             +.+.|.++||.+...  ++    ..++++||++.       +.++.+++.+.|.++..
T Consensus       289 -------~~~~l~~~gi~v~~~--~~----~~~~~~Ri~~~-------~~~~~~~l~~~l~~~~~  333 (337)
T PRK03967        289 -------AYDYLLENGIVVRKL--SG----RLEGHIRVTVG-------KREENDEFIKALKEIKE  333 (337)
T ss_pred             -------HHHHHHHCCEEEEeC--CC----CCCCeEEEecC-------CHHHHHHHHHHHHHHHH
Confidence                   556677789999642  21    23568999864       36888999999887654

>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]

Probab=99.84  E-value=1.1e-18  Score=172.32  Aligned_cols=335  Identities=17%  Similarity=0.198  Sum_probs=235.2

Q ss_pred             eeEecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHH
Q 009673          105 LELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP  179 (529)
Q Consensus       105 i~L~asen~~----~~~V~eal~~~l~~~y~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~  179 (529)
                      +...-|+.|+    .|.|++|+...+ ++|..|..|.|...|+ .+.-++|    +.++++.+-+.+     +..+|..-
T Consensus       173 VtVWCSNDYLgms~Hp~V~~A~~~tl-~~hG~GAGGTRNIsG~s~~hv~LE----~eLA~LHqK~aA-----LlFsSCfV  242 (570)
T KOG1360|consen  173 VTVWCSNDYLGMSRHPEVLDAMHDTL-DRHGAGAGGTRNISGHSKHHVRLE----AELADLHQKEAA-----LLFSSCFV  242 (570)
T ss_pred             eEEEecCccccccCChHHHHHHHHHH-HHcCCCcCCccccCCCCchhhhHH----HHHHHHhcCcce-----eeeeeeee
Confidence            4444566664    699999999887 5777788888877665 4455677    567888887763     34577778


Q ss_pred             HHHHHHHhhc--CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc---CCcE
Q 009673          180 ANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKL  254 (529)
Q Consensus       180 A~~~~l~all--~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~---~pkl  254 (529)
                      ||...+..|.  -||-+|......|.+.+-        .++-++.  .-+.+      ..-|+++|++++...   .||+
T Consensus       243 ANDstLftLak~lpgcei~SD~gNHASMI~--------GIrns~v--~K~IF------rHND~~hL~~lL~~~~~svPKi  306 (570)
T KOG1360|consen  243 ANDSTLFTLAKKLPGCEIFSDEGNHASMIQ--------GIRNSRV--PKHIF------RHNDLDHLEQLLQSSPKSVPKI  306 (570)
T ss_pred             ccchHHHHHHHHCCCcEEeccccchHHHHH--------HhhhcCC--cceee------ccCCHHHHHHHHHhCCCCCCce
Confidence            9998888874  489999877655543321        1222221  11111      145888888888753   5788


Q ss_pred             EEEc--CCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccc---cc--cCCCCCcccEEEecccccccCCCCeEEEee
Q 009673          255 IIAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SV--VADPFKYCDVVTTTTHKSLRGPRGGMIFFK  327 (529)
Q Consensus       255 Ii~~--~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~---~~--~~~~~~~aDiv~~S~hK~l~GprgG~i~~~  327 (529)
                      |.+.  +|..+.+.|+++|+++|++||++.++|+.|+.|+...   |+  .+..+...||+++++-|+| |--||+|...
T Consensus       307 vAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKaf-GcVGGYIAat  385 (570)
T KOG1360|consen  307 VAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAF-GCVGGYIAAT  385 (570)
T ss_pred             EEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhc-ccccceehhh
Confidence            8876  4556669999999999999999999999999998743   22  2222336899999999998 7889999998


Q ss_pred             CCCcchhHHHhhhcccccCCCCC-CChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673          328 KDPVLGVELESAINNAVFPGLQG-GPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL  406 (529)
Q Consensus       328 ~~~~~~~~l~~~i~~~~~p~~~g-~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~  406 (529)
                      .      ++.+.++...-.++.. +.....+++.-.+.+.+...+....+++.++|.+++++.|.+.|++++.  ..+|+
T Consensus       386 ~------~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiPVi~--~pSHI  457 (570)
T KOG1360|consen  386 R------KLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIPVIP--NPSHI  457 (570)
T ss_pred             h------hHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCcccC--CCcce
Confidence            8      7888887654332222 2223344444446666666666778888899999999999999999987  35788


Q ss_pred             EEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          407 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       407 ~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      +.+.+.....+.+....++.++||.|-..-+|  +.+.+...+||.-.    -+++++-|+.+.+.+..+++..
T Consensus       458 iPv~vgda~l~~~~sd~Li~~h~iYvQaINyP--TV~rG~E~LRiaPT----P~HT~~mm~~lv~~l~~vw~~v  525 (570)
T KOG1360|consen  458 IPVRVGDAALAKQASDILISKHNIYVQAINYP--TVARGTERLRIAPT----PHHTPQMMNILVNALLDVWNEV  525 (570)
T ss_pred             eeeeccCHHHHHHHHHHHHHhcCeEEEeccCC--cccccceeeecCCC----CCCCHHHHHHHHHHHHHHHHHc
Confidence            77766543333344556678899998653233  23455678999532    3467899999999999888754

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.84  E-value=5.2e-19  Score=185.04  Aligned_cols=215  Identities=24%  Similarity=0.246  Sum_probs=151.1

Q ss_pred             chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673          143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI  222 (529)
Q Consensus       143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~  222 (529)
                      ++...++|    +.+++++|.+..     +.++||++|+.+++.++++|||+|+++++.|++.+....    ......| 
T Consensus        60 ~p~~~~Le----~~lA~~~g~~~~-----i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~----~~~~~~g-  125 (388)
T PRK07811         60 NPTRTALE----EQLAALEGGAYG-----RAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLID----KVFTRWG-  125 (388)
T ss_pred             CccHHHHH----HHHHHHhCCCce-----EEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHH----HhCcCCC-
Confidence            34466777    678899999863     445899999999999999999999999998875432110    0111123 


Q ss_pred             eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673          223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD  300 (529)
Q Consensus       223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~  300 (529)
                       .++..++      ..|++++++.+++ ++|+|+++.|+||+  ..|+++|+++|+++|++||+|+++..+..     ..
T Consensus       126 -i~~~~~d------~~d~e~l~~~i~~-~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~-----~~  192 (388)
T PRK07811        126 -VEYTPVD------LSDLDAVRAAITP-RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYL-----QQ  192 (388)
T ss_pred             -eEEEEeC------CCCHHHHHHhcCc-CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCcccc-----CC
Confidence             2444433      2589999999987 89999999998886  78999999999999999999999766533     23


Q ss_pred             CCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccC-CCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          301 PFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       301 ~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p-~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      ++. ++|++++|++|++.||.   +|+++++++     ++.+++...... +...+|    ..+ +.++..+  ..+..+
T Consensus       193 p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~-----~l~~~~~~~~~~~g~~~s~----~~a-~l~~~~L--~tl~~R  260 (388)
T PRK07811        193 PLALGADVVVHSTTKYIGGHSDVVGGALVTNDE-----ELDEAFAFLQNGAGAVPGP----FDA-YLTLRGL--KTLAVR  260 (388)
T ss_pred             chhhCCcEEEecCceeecCCCCcEEEEEEECCH-----HHHHHHHHHHHhcCCCCCH----HHH-HHHHhcc--CcHHHH
Confidence            444 78999999999998873   699888764     565554432111 111111    111 1223322  235667


Q ss_pred             HHHHHHHHHHHHHHHHh-cCcE
Q 009673          376 QNKVVSNCRALASRLVE-LGYK  396 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~-~G~~  396 (529)
                      .++..+|+..+.+.|++ .++.
T Consensus       261 ~~~~~~na~~la~~L~~~p~v~  282 (388)
T PRK07811        261 MDRHSENAEAVAEFLAGHPEVS  282 (388)
T ss_pred             HHHHHHHHHHHHHHHHhCCCee
Confidence            78889999999999987 4554

>PLN02368 alanine transaminase

Probab=99.84  E-value=2.3e-19  Score=188.45  Aligned_cols=245  Identities=11%  Similarity=0.040  Sum_probs=164.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhc-CCCCEEEEcCCCCCccccccccccccccccccce
Q 009673          146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY  223 (529)
Q Consensus       146 ~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all-~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~  223 (529)
                      ..++.+.+.+++.+.+|++.+.  -+|.+|+|+ +++..++.+++ +|||+|++++|.|..+.        ..+...|. 
T Consensus       109 ~~~LR~aia~~~~~~~g~~~~~--~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~--------~~~~~~g~-  177 (407)
T PLN02368        109 LPGVRKEVAEFIERRDGYPSDP--ELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYS--------ATISLLGG-  177 (407)
T ss_pred             CHHHHHHHHHHHHHhcCCCCCh--hhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHH--------HHHHHcCC-
Confidence            3466666668888877864321  267779998 89999999987 79999999999776442        23445565 


Q ss_pred             EEEEEcccCCC-CCCCCHHHHHHHhhhc-----CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccc
Q 009673          224 FESMPYRLDES-TGLVDYDMLEKTAILF-----RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGL  292 (529)
Q Consensus       224 ~~~v~~~v~~~-~~~iD~d~le~~i~~~-----~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gl  292 (529)
                       ++++++++++ ++.+|++++++.+++.     ++|++++++|+||+  ..   .+++|.++|++||++||+|++ |..+
T Consensus       178 -~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~-Y~~l  255 (407)
T PLN02368        178 -TLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEV-YQQN  255 (407)
T ss_pred             -EEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcc-cccc
Confidence             6777777643 4789999999998742     68988998899997  33   567788889999999999998 5555


Q ss_pred             ccccc--cCCC------C----C-c-ccEEEecccccc---cCCCCeEEEe---eCCCcchhHHHhhhcccccCCCCCCC
Q 009673          293 VAASV--VADP------F----K-Y-CDVVTTTTHKSL---RGPRGGMIFF---KKDPVLGVELESAINNAVFPGLQGGP  352 (529)
Q Consensus       293 i~~~~--~~~~------~----~-~-aDiv~~S~hK~l---~GprgG~i~~---~~~~~~~~~l~~~i~~~~~p~~~g~p  352 (529)
                      ++.+.  +.+.      +    . + --|++.|+||++   +|+|.||+++   ++      ++.+.+.+.... ..+.+
T Consensus       256 ~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~------~li~~~~~~~~~-~~~~~  328 (407)
T PLN02368        256 IYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPP------KTVEEIYKVASI-ALSPN  328 (407)
T ss_pred             ccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCH------HHHHHHHHHhcc-cCCCC
Confidence            54432  1110      0    0 1 127779999985   6999999985   44      566666553211 12333


Q ss_pred             hHHHHHHHHHHHHHhc--Cc---hH----HHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEEEccC
Q 009673          353 HNHTIGGLAVCLKHAQ--SP---EF----KVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLR  412 (529)
Q Consensus       353 ~~~~iaala~al~~~~--~~---~~----~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~  412 (529)
                      ...+.++ ..+|+.-.  ..   .+    +++.+.+.++++.+.+.|++. |+.+..+ ..++++|.++.
T Consensus       329 ~~~Q~aa-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P-~Gafy~~~~i~  396 (407)
T PLN02368        329 VSGQIFM-GLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFT-EGAMYSFPQIK  396 (407)
T ss_pred             cHHHHHH-HHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCC-CeeeEeccCCC
Confidence            3444443 33453210  00   12    345677888999999999984 8877654 23566676664

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.83  E-value=4.4e-19  Score=175.68  Aligned_cols=320  Identities=18%  Similarity=0.202  Sum_probs=201.8

Q ss_pred             cCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHH
Q 009673          109 ASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT  186 (529)
Q Consensus       109 asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~  186 (529)
                      .|+|.  ..|+++|+|...-.       .+..-||..++...+|    ++++++||...     .+.+.|||.||..++.
T Consensus         5 ~SDn~~g~~~~m~eam~~a~~-------~~~~~YG~D~~~~~~e----~~~ae~~g~~a-----~~Fv~sGT~aN~lal~   68 (342)
T COG2008           5 RSDNVAGPTPEMREALAAANA-------VGDDVYGEDPTTNALE----QRIAELFGKEA-----ALFVPSGTQANQLALA   68 (342)
T ss_pred             ccCccCCCCHHHHHHHHhccc-------cCCCCCCCCHHHHHHH----HHHHHHhCCce-----EEEecCccHHHHHHHH
Confidence            46665  57999999975421       1223477777778777    78899999843     3556999999999999


Q ss_pred             hhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhh----c--CCcEEEEcC
Q 009673          187 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAIL----F--RPKLIIAGA  259 (529)
Q Consensus       187 all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~----~--~pklIi~~~  259 (529)
                      +.++||+.|++-.-.|-      |......+.+.+   ...++++.+ .++.+++|+|++.+..    +  +|.+++.+.
T Consensus        69 ~~~~~~~~vi~~~~aHi------~~~E~Ga~~~~~---~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~  139 (342)
T COG2008          69 AHCQPGESVICHETAHI------YTDECGAPEFFG---GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENT  139 (342)
T ss_pred             HhcCCCCeEEEeccccc------eecccCcHHHHc---CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeec
Confidence            99999999998775442      211112333333   223333443 5689999999998763    1  345566664


Q ss_pred             CC-CCCCC---CHHHHHHHHHHhCCEEEEecccccccc-cccccCCCC-CcccEEEecccccccCCCCeEEEeeCCCcch
Q 009673          260 SA-YPRDF---DYPRMRQIADAVGALLMMDMAHISGLV-AASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLG  333 (529)
Q Consensus       260 s~-~p~~~---d~~~i~~ia~~~g~~livD~ah~~Gli-~~~~~~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~  333 (529)
                      ++ .++..   .+++|+++||++|+.|+.|+|...... ..+...... .++|+++++++|.++.|-+.+++++.     
T Consensus       140 ~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~-----  214 (342)
T COG2008         140 ATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNR-----  214 (342)
T ss_pred             cCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCH-----
Confidence            43 34444   467788899999999999998654432 223111112 28999999999998777778888887     


Q ss_pred             hHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceEEEcc
Q 009673          334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDL  411 (529)
Q Consensus       334 ~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~~v~~  411 (529)
                       ++.++.+...-..  |+ .+.+.--++++.....+.. |.....+-.+.++.|.+.|.+ +|+++..+ .+++++++++
T Consensus       215 -~~~~~a~~~rK~~--Gg-l~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~-~~tN~vf~~l  289 (342)
T COG2008         215 -DFAKRARRWRKRA--GG-LMRKARFLAAQGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFP-VETNMVFVRL  289 (342)
T ss_pred             -HHHHHHHHHHHHh--cc-cHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccC-CcccEEEEEC
Confidence             7777654332111  11 1112111222222222233 333333333338999999985 69999887 5678888887


Q ss_pred             CCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          412 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       412 ~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      +...++.......+...|+.++..          ..-+|+-++    +..+++|+++++..++.++
T Consensus       290 ~~~~i~~l~~~~~~~~~~~~~~~~----------~~~vRfvts----~a~~~edv~~~~~~~~~~~  341 (342)
T COG2008         290 PESAIEALRLAGALFYRGVLIGAH----------GEIVRFVTS----WATSEEDVDELVAAIKALL  341 (342)
T ss_pred             ChHHHHHHHhhchhheeeeeccCC----------CceEEEEee----ccCCHHHHHHHHHHHHHhh
Confidence            643333333344445555554210          035898654    4456899999999887653

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.83  E-value=5.1e-19  Score=185.88  Aligned_cols=291  Identities=16%  Similarity=0.199  Sum_probs=187.1

Q ss_pred             chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673          143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI  222 (529)
Q Consensus       143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~  222 (529)
                      ++...++|    +.+++++|.+.     .+.+.||+.|+..++.++++|||+|+++++.|++.+...    ...+...|.
T Consensus        63 ~p~~~~Le----~~iA~~~g~~~-----~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~----~~~~~~~G~  129 (400)
T PRK06234         63 NPTSTEVE----NKLALLEGGEA-----AVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALL----NHGLTRYGV  129 (400)
T ss_pred             CccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHH----HHHHhhCCe
Confidence            34566777    67888899763     356789999999999999999999999998776543211    011233454


Q ss_pred             eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHh--CCEEEEeccccccccccccc
Q 009673          223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVV  298 (529)
Q Consensus       223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~  298 (529)
                        +++.++.      .|++++++.+++ ++|+|++++|+||+  ..|+++|.++|+++  |+++++|+++..+..     
T Consensus       130 --~v~~vd~------~d~e~l~~~i~~-~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~-----  195 (400)
T PRK06234        130 --EVTFVDT------SNLEEVRNALKA-NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYI-----  195 (400)
T ss_pred             --EEEEECC------CCHHHHHHHhcc-CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhc-----
Confidence              5656543      379999999987 89999999999887  78999999999997  999999999766533     


Q ss_pred             CCCCC-cccEEEecccccccCC--C-CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673          299 ADPFK-YCDVVTTTTHKSLRGP--R-GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV  374 (529)
Q Consensus       299 ~~~~~-~aDiv~~S~hK~l~Gp--r-gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~  374 (529)
                      ..++. ++|++++|++|++.|+  + +|++++++      ++.+++.........|.......+++  .+..+  ..+..
T Consensus       196 ~~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~------~~~~~l~~~~~~~~~g~~l~p~~a~l--~~~~l--~tl~~  265 (400)
T PRK06234        196 QRPLQLGADVVVHSATKYLNGHGDVIAGFVVGKE------EFINQVKLFGIKDMTGSVIGPFEAFL--IIRGM--KTLQI  265 (400)
T ss_pred             CCchhhCCcEEEeeccccccCCCCceeEEEEecH------HHHHHHHHHHHHHhcCCCCCHHHHHH--HHhcc--CcHHH
Confidence            13333 6899999999999764  3 59999987      56665543211111122111122222  23322  23456


Q ss_pred             HHHHHHHHHHHHHHHHHhc-CcE-EecCC---------------CCCceEEEccCCCCC-cHHHHHHhHhcCCeEEcCCC
Q 009673          375 YQNKVVSNCRALASRLVEL-GYK-LVSGG---------------SDNHLVLVDLRPMGI-DGARVEKILDMASITLNKNS  436 (529)
Q Consensus       375 ~~~~i~~~a~~l~~~L~~~-G~~-v~~~g---------------t~~~~~~v~~~~~~i-~~~~~~~~L~~~GI~v~~~~  436 (529)
                      ++++..+|+..+.+.|.+. .+. +..++               ..++++.+++.. +. ....+.+.|+-.++.++.+.
T Consensus       266 r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~-~~~~~~~f~~~l~~~~~~~s~G~  344 (400)
T PRK06234        266 RMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKG-GVEEGKVVMNNVKLATLAVSLGD  344 (400)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecC-cHHHHHHHHHhCCcceEeccCCC
Confidence            7788889999999999873 332 22221               123345555532 11 12345556666666665432


Q ss_pred             ------CCCCCC------------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          437 ------VPGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       437 ------~Pg~~~------------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                            .|...+            ...++-||+++.        -||.+.+.+-|.+++..
T Consensus       345 ~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svG--------lE~~~dl~~dl~~al~~  397 (400)
T PRK06234        345 AETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVG--------LEDVDDIIADLKQALDL  397 (400)
T ss_pred             CCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeC--------CCCHHHHHHHHHHHHHH
Confidence                  132110            012356899864        26777777777777763

>PRK04311 selenocysteine synthase; Provisional

Probab=99.83  E-value=2.4e-18  Score=182.37  Aligned_cols=322  Identities=17%  Similarity=0.168  Sum_probs=200.5

Q ss_pred             CCCCCcHHHHHHHhhhhhccCCC-CCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh
Q 009673          110 SENFTSRAVMEAVGSCLTNKYSE-GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI  188 (529)
Q Consensus       110 sen~~~~~V~eal~~~l~~~y~~-G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al  188 (529)
                      +-.++|+++++++...+.+ |.. .|--.....| +..+.+|    +.+++++|.+.    + +.++||+.|+..++.+ 
T Consensus        94 g~s~l~~~v~eav~~~~~~-~~~le~~l~~g~~g-~r~~~~e----~~lA~l~Gae~----a-~vv~sgtaAl~l~l~~-  161 (464)
T PRK04311         94 GRALLSEAAIEAVTEAARG-YSNLEYDLATGKRG-SRDRALA----ALLCALTGAED----A-LVVNNNAAAVLLALNA-  161 (464)
T ss_pred             CCCCCCHHHHHHHHHHHhc-ccccccchhhcccc-hHHHHHH----HHHHHHhCCCe----E-EEECCHHHHHHHHHHH-
Confidence            4457899999999877653 321 1100000112 2234444    78899999985    2 4468899999888765 


Q ss_pred             cCCCCEEEEcCCCCC---ccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--
Q 009673          189 LKPHDRIMGLDLPHG---GHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--  263 (529)
Q Consensus       189 l~pGD~Vl~~~~~~~---g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p--  263 (529)
                      +.+||+|++.+.++.   +.+...     ..+...|.  +++.++.+   ...+++++++++++ +|++|++.+++|+  
T Consensus       162 l~~GdeVIvs~~e~~~~ggs~~i~-----~~~~~~G~--~l~~v~~~---~~t~~~dle~aI~~-~TklV~~vh~sN~~i  230 (464)
T PRK04311        162 LAAGKEVIVSRGELVEIGGAFRIP-----DVMRQAGA--RLVEVGTT---NRTHLRDYEQAINE-NTALLLKVHTSNYRI  230 (464)
T ss_pred             hCCCCEEEEcchhhhhcCcchhhH-----HHHHHCCc--EEEEECCC---CCCCHHHHHHhcCc-cCeEEEEEcCCCccc
Confidence            589999999876442   221110     11233454  66666543   34679999999987 8999888766554  


Q ss_pred             ----CCCCHHHHHHHHHHhCCEEEEeccccccccc----cc--ccC---CCCC-cccEEEecccccccCCCCeEEEeeCC
Q 009673          264 ----RDFDYPRMRQIADAVGALLMMDMAHISGLVA----AS--VVA---DPFK-YCDVVTTTTHKSLRGPRGGMIFFKKD  329 (529)
Q Consensus       264 ----~~~d~~~i~~ia~~~g~~livD~ah~~Gli~----~~--~~~---~~~~-~aDiv~~S~hK~l~GprgG~i~~~~~  329 (529)
                          ...|+++|+++|++||+++++|.+  +|.+.    .+  ..+   .++. ++|++++|+||++.||.+|++++++ 
T Consensus       231 ~G~~~~~dl~eI~~lak~~gi~vivD~g--sG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~~-  307 (464)
T PRK04311        231 EGFTKEVSLAELAALGKEHGLPVVYDLG--SGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGKK-  307 (464)
T ss_pred             cccCCcCCHHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEcH-
Confidence                257999999999999999999985  33321    11  111   2233 7999999999999999999999987 


Q ss_pred             CcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCch-----------HHHHHHHHHHHHHHHHHHHHhc---Cc
Q 009673          330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-----------FKVYQNKVVSNCRALASRLVEL---GY  395 (529)
Q Consensus       330 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~-----------~~~~~~~i~~~a~~l~~~L~~~---G~  395 (529)
                           ++.+++.+....-.. ...-..++++...+.....+.           +....++..+++..+.+.|.+.   ++
T Consensus       308 -----~li~~l~~~~~~r~l-r~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~  381 (464)
T PRK04311        308 -----ELIARLKKHPLKRAL-RVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAF  381 (464)
T ss_pred             -----HHHHHHhhchhHHHH-hcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCe
Confidence                 677666531100000 001124555555555332211           1123367778999999999874   22


Q ss_pred             --EEec------CCCCC----ceEEEccCCCCCcHHHHHHhHhcCC--eEEcCCCCCCCCCCCCCCeEEEccCCCccCCC
Q 009673          396 --KLVS------GGSDN----HLVLVDLRPMGIDGARVEKILDMAS--ITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF  461 (529)
Q Consensus       396 --~v~~------~gt~~----~~~~v~~~~~~i~~~~~~~~L~~~G--I~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~  461 (529)
                        .+..      +|+..    .-.-+.+.+.+.+...+++.|++..  |....          ..+.+.+-     -|.+
T Consensus       382 ~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r~----------~~~~~~ld-----~r~~  446 (464)
T PRK04311        382 AVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGRI----------EDGRLLLD-----LRTL  446 (464)
T ss_pred             eEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEEE----------ECCEEEEE-----eCcC
Confidence              3432      22221    1223445555667888999998744  44421          23445543     2557


Q ss_pred             CHHHHHHHHHHHHHHHH
Q 009673          462 SEKEFVAIADFIHEGVE  478 (529)
Q Consensus       462 ~~~d~~~la~~i~~~~~  478 (529)
                      .++|++.+++.+.+++.
T Consensus       447 ~~~~~~~~~~~~~~~~~  463 (464)
T PRK04311        447 EEEDEERLAAALLEALN  463 (464)
T ss_pred             CHHHHHHHHHHHHHHhh
Confidence            79999999999988753

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.83  E-value=4.6e-19  Score=186.01  Aligned_cols=216  Identities=20%  Similarity=0.192  Sum_probs=148.3

Q ss_pred             chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673          143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI  222 (529)
Q Consensus       143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~  222 (529)
                      ++..+++|    +.+++++|++..    . .+.||+.|+..++.++++|||+|+++++.|+++.....    ......| 
T Consensus        64 ~p~~~~Le----~~lA~l~G~~~~----~-~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~----~~~~~~G-  129 (398)
T PRK07504         64 NPTVDMFE----KRMCALEGAEDA----R-ATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVE----TLLPRYG-  129 (398)
T ss_pred             CchHHHHH----HHHHHHhCCCee----e-EecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHH----HHHhhcC-
Confidence            45566777    678899999873    2 35799999988888899999999999988776532110    0011223 


Q ss_pred             eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673          223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD  300 (529)
Q Consensus       223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~  300 (529)
                       .++..++      .+|++++++++++ ++|+|++++|+||+  ..|+++|.++|+++|+++++|++|..+..     ..
T Consensus       130 -~~v~~vd------~~d~e~l~~ai~~-~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~-----~~  196 (398)
T PRK07504        130 -IESTLVD------GLDLDNWEKAVRP-NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLF-----QK  196 (398)
T ss_pred             -eEEEEEC------CCCHHHHHHhcCc-CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCcccccc-----CC
Confidence             3554532      3789999999987 89999999999986  78999999999999999999999876643     23


Q ss_pred             CCC-cccEEEecccccccC--CC-CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHH
Q 009673          301 PFK-YCDVVTTTTHKSLRG--PR-GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ  376 (529)
Q Consensus       301 ~~~-~aDiv~~S~hK~l~G--pr-gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~  376 (529)
                      ++. ++|++++|+||++.|  ++ ||+++++++     .+.+++.....  ..|.......++  .++..+  ..+..+.
T Consensus       197 ~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~-----~i~~~~~~~~~--~~g~~~s~~~A~--~~l~~L--~tl~~R~  265 (398)
T PRK07504        197 PLELGAHIVVYSATKHIDGQGRCLGGVVLSDKA-----WIEEHLQDYFR--HTGPSLSPFNAW--TLLKGL--ETLPVRV  265 (398)
T ss_pred             chhhCCCEEEeeccccccCCccceEEEEEeCcH-----HHHHHHHHHHH--HhCCCCCHHHHH--HHHhcc--chHHHHH
Confidence            444 789999999999965  34 478887763     22222322110  012111112222  223332  2356778


Q ss_pred             HHHHHHHHHHHHHHHh-cCcE
Q 009673          377 NKVVSNCRALASRLVE-LGYK  396 (529)
Q Consensus       377 ~~i~~~a~~l~~~L~~-~G~~  396 (529)
                      ++..+|+..+.+.|.+ .++.
T Consensus       266 ~~~~~na~~la~~L~~~p~v~  286 (398)
T PRK07504        266 RQQTESAAAIADFLAGHPKVA  286 (398)
T ss_pred             HHHHHHHHHHHHHHHcCCCcc
Confidence            8888999999999987 3443

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.83  E-value=4.7e-20  Score=190.45  Aligned_cols=265  Identities=19%  Similarity=0.255  Sum_probs=176.6

Q ss_pred             HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673          153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL  231 (529)
Q Consensus       153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v  231 (529)
                      +++.++++||++...     ..++|| .+|.++++++++|||+||+....|-+.+.        .+.+.|+  .+++++.
T Consensus        71 Ae~~aA~~fGAd~t~-----flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~--------alil~ga--~Pvyi~p  135 (417)
T PF01276_consen   71 AEELAARAFGADKTF-----FLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYN--------ALILSGA--IPVYIPP  135 (417)
T ss_dssp             HHHHHHHHHTESEEE-----EESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHH--------HHHHHTE--EEEEEEE
T ss_pred             HHHHHHHhcCCCeEE-----EEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHH--------HHHHcCC--eEEEecC
Confidence            447889999999853     247888 99999999999999999999877655431        3445665  5555443


Q ss_pred             C-CCC---CCCCH-----HHHHHHhhhcC----CcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEecccccccccccc
Q 009673          232 D-EST---GLVDY-----DMLEKTAILFR----PKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASV  297 (529)
Q Consensus       232 ~-~~~---~~iD~-----d~le~~i~~~~----pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~  297 (529)
                      . .+.   +.+++     +.|+++++++.    ++++++.+|+|-+ ..|+++|.++|+++|++|++|+||++.+.+.+.
T Consensus       136 ~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~l  215 (417)
T PF01276_consen  136 EDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPL  215 (417)
T ss_dssp             EE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGG
T ss_pred             CccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCCC
Confidence            2 121   24566     99999998732    3448888888877 779999999999999999999999877665543


Q ss_pred             cCCCCC-ccc-------EEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc
Q 009673          298 VADPFK-YCD-------VVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ  368 (529)
Q Consensus       298 ~~~~~~-~aD-------iv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~  368 (529)
                      ..+.+. ++|       +++.|+||++++... ++|..+.+...   -.++++....-....+|++..+|++..|.+++.
T Consensus       216 p~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v---~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~  292 (417)
T PF01276_consen  216 PRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIV---DHERVNEALSMHQTTSPSYPLMASLDVARAQME  292 (417)
T ss_dssp             GTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCT---THHHHHHHHHHHS-SS--HHHHHHHHHHHHHHS
T ss_pred             ccchhhccCccccccceeeeechhhcccccccceEEEecCCCcc---cHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHh
Confidence            333344 789       999999999998876 88888875200   123444432222356889999999999888773


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHh----cCcEEecCC----C------------------------CCceEEEcc-----
Q 009673          369 SPEFKVYQNKVVSNCRALASRLVE----LGYKLVSGG----S------------------------DNHLVLVDL-----  411 (529)
Q Consensus       369 ~~~~~~~~~~i~~~a~~l~~~L~~----~G~~v~~~g----t------------------------~~~~~~v~~-----  411 (529)
                      ..+.++..++..++++.+++.|++    .++.++.+.    .                        |.--+.+.+     
T Consensus       293 ~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K~ti~~pG~~~  372 (417)
T PF01276_consen  293 EEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLDPTKLTINTPGIDA  372 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-TTEEEEE-STBET
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhcccCccccCCcEEEEEccCcCc
Confidence            345578888889999999999943    466665421    0                        111123333     


Q ss_pred             ----CCCCCcHHHHHHhHhcCCeEEcCC
Q 009673          412 ----RPMGIDGARVEKILDMASITLNKN  435 (529)
Q Consensus       412 ----~~~~i~~~~~~~~L~~~GI~v~~~  435 (529)
                          ...|+++..+.+.|+++||.+.+.
T Consensus       373 ~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~  400 (417)
T PF01276_consen  373 DGELSELGIPGYIVEKYLREHGIQVEKT  400 (417)
T ss_dssp             TSSB-SS---HHHHHHHHHHTTEE-SEE
T ss_pred             CCcccccCCCHHHHHHHHHHcCCEEEec
Confidence                456788999999999999999763

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.83  E-value=2.5e-18  Score=195.32  Aligned_cols=302  Identities=19%  Similarity=0.179  Sum_probs=202.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh----cCCCC----EEEEcCCCCCcccccccccccccccc
Q 009673          148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----LKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSG  219 (529)
Q Consensus       148 ~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al----l~pGD----~Vl~~~~~~~g~~s~g~~~~~~~i~~  219 (529)
                      +++...++++++++|.+.    +.+++.+|+.|+++.++++    .++||    +|++++..|+++..        .+.+
T Consensus       542 ~~i~e~q~~l~eltG~d~----~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~--------sa~~  609 (954)
T PRK05367        542 ELIDQLEAWLAEITGYDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPA--------SAVM  609 (954)
T ss_pred             HHHHHHHHHHHHHHCCCC----EEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHH--------HHHH
Confidence            444456699999999985    5677777878886665554    25776    58888877766532        2334


Q ss_pred             ccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccc
Q 009673          220 TSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA  295 (529)
Q Consensus       220 ~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~  295 (529)
                      .|.  +++.++++ +++.+|+++|++.++++  ++.+|++.++++.+  ..|+++|+++|+++|+++++|+||..+++..
T Consensus       610 ~G~--~vv~v~~d-~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l  686 (954)
T PRK05367        610 AGM--KVVVVACD-ENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGL  686 (954)
T ss_pred             CCC--EEEEECCC-CCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCC
Confidence            454  77777776 46899999999999764  45667677666555  3689999999999999999999997665532


Q ss_pred             cccCCCCC-cccEEEecccccccCCCC------eEEEeeCCCcchhHHHhhhccc-----ccCCCCCCChHH----HHHH
Q 009673          296 SVVADPFK-YCDVVTTTTHKSLRGPRG------GMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNH----TIGG  359 (529)
Q Consensus       296 ~~~~~~~~-~aDiv~~S~hK~l~Gprg------G~i~~~~~~~~~~~l~~~i~~~-----~~p~~~g~p~~~----~iaa  359 (529)
                      .   .|.. ++|++++++||||++|.|      |++++++.      +...+...     ......|.....    ...+
T Consensus       687 ~---~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~------l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~  757 (954)
T PRK05367        687 A---RPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH------LAPFLPGHPVQIAGGETGIGAVSAAPFGSASIL  757 (954)
T ss_pred             C---ChhhcCCCEEEecCcccCCCCcCCCCCceEEEeeccc------ccccCCCCccCcCCCCCCcCcchhHHHHHHHHH
Confidence            1   2323 799999999999865553      58888762      33222111     011111111111    1111


Q ss_pred             --HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC---CCCCceEEEccCCC----CCcHHHHHHhHhcCCe
Q 009673          360 --LAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG---GSDNHLVLVDLRPM----GIDGARVEKILDMASI  430 (529)
Q Consensus       360 --la~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~---gt~~~~~~v~~~~~----~i~~~~~~~~L~~~GI  430 (529)
                        .+..+..+..+++++..++...+++++.+.|.+ ++++...   +...|-+++++++.    +++..++.+.|.++||
T Consensus       758 ~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~-~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~  836 (954)
T PRK05367        758 PISWMYIRMMGAEGLRQATEVAILNANYIAKRLKD-HYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGF  836 (954)
T ss_pred             HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-hcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCC
Confidence              112244455566788888888999999999977 3554332   22345567777421    4566889999999999


Q ss_pred             EEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 009673          431 TLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAK  484 (529)
Q Consensus       431 ~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~~~  484 (529)
                      .....+.|      .++.+||.....+    +++|++++++++..+.....++.
T Consensus       837 ~~~t~~~p------v~~~l~i~ptE~~----s~~elDr~~~al~~i~~e~~~~~  880 (954)
T PRK05367        837 HAPTMSFP------VAGTLMVEPTESE----SKAELDRFCDAMIAIRAEIDEVE  880 (954)
T ss_pred             eEeecCCc------cCCEEEEEeeecC----CHHHHHHHHHHHHHHHHHHHHhh
Confidence            87542223      3578999876654    48999999999988887665543

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=99.83  E-value=7.8e-19  Score=180.12  Aligned_cols=262  Identities=17%  Similarity=0.174  Sum_probs=171.4

Q ss_pred             HHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC
Q 009673          155 KRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE  233 (529)
Q Consensus       155 ~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~  233 (529)
                      +.+++.+|.+      +|.+++|+ +++..++  .+.|||+|++++|.|..+.        ..+...|.  +++.+++  
T Consensus        56 ~~ia~~~~~~------~I~it~Gs~~al~~~~--~~~~gd~v~v~~P~y~~~~--------~~~~~~g~--~~~~v~~--  115 (330)
T PRK05664         56 AAARAYYGAP------QLLPVAGSQAAIQALP--RLRAPGRVGVLSPCYAEHA--------HAWRRAGH--QVRELDE--  115 (330)
T ss_pred             HHHHHHhCCC------CEEECcCHHHHHHHHH--HccCCCEEEEcCCChHHHH--------HHHHHcCC--eEEEech--
Confidence            5677778863      46679998 7877654  4689999999999775442        23344565  6666543  


Q ss_pred             CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCCC-ccc-
Q 009673          234 STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD-  306 (529)
Q Consensus       234 ~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aD-  306 (529)
                             +++++.+.  +++++++++|+||+  ..+   +++|.++|+++|++||+|+++. ........ ..+. +.. 
T Consensus       116 -------~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~-~~~~~~s~-~~~~~~~~v  184 (330)
T PRK05664        116 -------AEVEAALD--SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFM-DNTPQHSL-AACAHRPGL  184 (330)
T ss_pred             -------hhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcc-cCCCcccc-cccccCCCE
Confidence                   24555553  67888888899997  444   5666677789999999999853 32211000 0111 112 


Q ss_pred             EEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673          307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR  384 (529)
Q Consensus       307 iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~  384 (529)
                      +++.|++|++  +|+|.||+++++      ++.+.+.....+...  ....+. +...+|..  ....+..++++.++++
T Consensus       185 i~~~SfSK~~gl~GlRiG~~v~~~------~l~~~~~~~~~~~~~--~~~~~~-~~~~~L~~--~~~~~~~~~~~~~~r~  253 (330)
T PRK05664        185 IVLRSFGKFFGLAGARLGFVLAEP------ALLRALAELLGPWTV--SGPTRW-LAQAALAD--TPWQRRQRERLLAASQ  253 (330)
T ss_pred             EEEeeccccccCCCcceEEEEeCH------HHHHHHHHhcCCCCC--CHHHHH-HHHHHHhC--hHHHHHHHHHHHHHHH
Confidence            7889999986  799999999987      677777654333221  122222 22334432  1223566778888899


Q ss_pred             HHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHH
Q 009673          385 ALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK  464 (529)
Q Consensus       385 ~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~  464 (529)
                      .+.+.|++.|+... + +...++|+.+.    +..++.+.|.++||.|..  . +     .+++|||++..      +++
T Consensus       254 ~l~~~L~~~~~~~~-~-~~~~f~~~~~~----~~~~~~~~l~~~gi~v~~--f-~-----~~~~iRis~~~------~~~  313 (330)
T PRK05664        254 RLAALLRRHGLTPA-G-GCALFQWVRTE----DAAALHEFLARRGILTRL--F-E-----QPASLRFGLPA------DEA  313 (330)
T ss_pred             HHHHHHHHCCCccc-C-CcceEEEEecC----CHHHHHHHHHHCCeEEEE--C-C-----CCCeEEEECCC------CHH
Confidence            99999998877532 2 22345565542    567788889999999953  1 1     24689999642      368


Q ss_pred             HHHHHHHHHHHHHH
Q 009673          465 EFVAIADFIHEGVE  478 (529)
Q Consensus       465 d~~~la~~i~~~~~  478 (529)
                      +++++.+.|+++.+
T Consensus       314 ~~~~l~~al~~~~~  327 (330)
T PRK05664        314 DWARLDQALLAYRK  327 (330)
T ss_pred             HHHHHHHHHHHHHh
Confidence            89999999887654

>PLN02242 methionine gamma-lyase

Probab=99.83  E-value=1.5e-18  Score=182.85  Aligned_cols=224  Identities=18%  Similarity=0.193  Sum_probs=157.3

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++...++|    +.+++++|.+..     +.+.||++|+..++.++++|||+|++.++.|+++......   ......|
T Consensus        74 ~~Pt~~~LE----~~lA~l~g~~~~-----l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~---~~~~~~G  141 (418)
T PLN02242         74 FNPTVLNLG----RQMAALEGTEAA-----YCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAH---FLPRKCN  141 (418)
T ss_pred             CChhHHHHH----HHHHHHhCCCeE-----EEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHH---hhhhccC
Confidence            567778888    678899999862     3468889999999999999999999999877654211000   0011234


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  +++.++.      .|++++++++++.++|+|++++++||+  ..|+++|+++|+++|++||+|++|.. +..     
T Consensus       142 ~--~~~~~d~------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~-~~~-----  207 (418)
T PLN02242        142 I--TTTFVDI------TDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAP-MVL-----  207 (418)
T ss_pred             c--eEEEcCC------CCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCc-cCC-----
Confidence            3  4444332      389999999976459999999999987  67999999999999999999999743 221     


Q ss_pred             CCCC-cccEEEecccccccC--CC-CeEEEeeCCCcchhHHHhhhcccccC--CCCCCChHHHHHHHHHHHHHhcCchHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRG--PR-GGMIFFKKDPVLGVELESAINNAVFP--GLQGGPHNHTIGGLAVCLKHAQSPEFK  373 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~G--pr-gG~i~~~~~~~~~~~l~~~i~~~~~p--~~~g~p~~~~iaala~al~~~~~~~~~  373 (529)
                      .+.. ++|++++|++|++.|  ++ ||++++++      ++.+.+......  ...|.+...+.+++. + ..  ...+.
T Consensus       208 ~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~------~li~~l~~~~~~~~~~~g~~~~~~~A~l~-~-~~--l~tl~  277 (418)
T PLN02242        208 SPARLGADVVVHSISKFISGGADIIAGAVCGPA------ELVNSMMDLHHGALMLLGPTMNPKVAFEL-S-ER--LPHLS  277 (418)
T ss_pred             CHHHcCCcEEEEeCccccCCCCCceEEEEEcCH------HHHHHHHHHhhhhhhccCCCCCHHHHHHH-H-cC--CCcHH
Confidence            2222 589999999999854  34 69999887      566655433111  123443434444332 2 21  12456


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCcEEecCC
Q 009673          374 VYQNKVVSNCRALASRLVELGYKLVSGG  401 (529)
Q Consensus       374 ~~~~~i~~~a~~l~~~L~~~G~~v~~~g  401 (529)
                      .++++..+|++.+++.|++.++++..++
T Consensus       278 ~r~~~~~~~a~~la~~L~~~~~~V~yP~  305 (418)
T PLN02242        278 LRMKEHCRRAMEYAKRMKELGLKVIYPG  305 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEECCC
Confidence            6778899999999999999888887543

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.83  E-value=1.2e-18  Score=181.87  Aligned_cols=212  Identities=19%  Similarity=0.215  Sum_probs=147.7

Q ss_pred             chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673          143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI  222 (529)
Q Consensus       143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~  222 (529)
                      ++..+.+|    ++++++.|.+.     .+...+|++|+..++.++++|||+|+++++.|++.+....    ......+ 
T Consensus        51 ~pt~~~L~----~~lA~l~g~~~-----~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~----~~~~~~g-  116 (386)
T PRK08045         51 NPTRDVVQ----RALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFD----SLAKRGC-  116 (386)
T ss_pred             CccHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHH----HHHhhCC-
Confidence            44566666    77888888642     3556777899999999999999999999998876432110    0001111 


Q ss_pred             eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673          223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD  300 (529)
Q Consensus       223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~  300 (529)
                       .++..+  +    ..|++++++.+++ ++|+|++++|+||+  ..|+++|.++|+++|+++++|+++..+..     ..
T Consensus       117 -i~v~~v--d----~~d~e~l~~~l~~-~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~-----~~  183 (386)
T PRK08045        117 -YRVLFV--D----QGDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPAL-----QN  183 (386)
T ss_pred             -eEEEEe--C----CCCHHHHHHhccc-CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCcccc-----CC
Confidence             233332  2    3689999999987 89999999999997  78999999999999999999999765532     34


Q ss_pred             CCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhccccc-CCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          301 PFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       301 ~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      |+. ++|+++.|+||++.|+.   +|+++++++     ++.+++..... .+...+| ....    .+++.+.  .+..+
T Consensus       184 pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~-----~~~~~l~~~~~~~g~~~~p-~~~~----l~~rgl~--tl~~R  251 (386)
T PRK08045        184 PLALGADLVLHSCTKYLNGHSDVVAGVVIAKDP-----DVVTELAWWANNIGVTGGA-FDSY----LLLRGLR--TLVPR  251 (386)
T ss_pred             chhhCCCEEEeecceeccCCCCceeEEEEeCcH-----HHHHHHHHHHHhcCCCCCH-HHHH----HHHhhhc--cHHHH
Confidence            454 78999999999998887   588877653     56555542211 1211121 1111    1222222  25677


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q 009673          376 QNKVVSNCRALASRLVEL  393 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~~  393 (529)
                      +++..+|+..+++.|++.
T Consensus       252 ~~~~~~na~~la~~L~~~  269 (386)
T PRK08045        252 MELAQRNAQAIVKYLQTQ  269 (386)
T ss_pred             HHHHHHHHHHHHHHHHcC
Confidence            899999999999999884

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.83  E-value=3.3e-18  Score=178.30  Aligned_cols=290  Identities=17%  Similarity=0.160  Sum_probs=186.0

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      |++..+.+|    +.++++.|.+.     .+...+|++|+..++.++++|||+|+++++.|++.+....     . ....
T Consensus        51 ~npt~~~Le----~~lA~leg~e~-----ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~-----~-~~~~  115 (388)
T PRK08861         51 GNPNRGLLE----QTLSELESGKG-----AVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFN-----T-RANK  115 (388)
T ss_pred             CCchHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHH-----H-HHhc
Confidence            455677777    67888999653     2444566699999999999999999999988876432110     0 0111


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .++++..++      ..|++++++++++ ++++|++++|+||+  ..|+++|.++|+++|+++++|+++..+..     .
T Consensus       116 ~gi~v~~vd------~~d~e~l~~~i~~-~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~-----~  183 (388)
T PRK08861        116 GDFKVQFVD------QSDAAALDAALAK-KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVL-----Q  183 (388)
T ss_pred             CCeEEEEEC------CCCHHHHHHhcCc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccc-----C
Confidence            123555543      3589999999987 89999999999987  78999999999999999999999876643     2


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      .|++ ++|++++|+||++.|+.   ||+++++++     ++.+++.....  ..|.... ...+ +..++.+.  -+.-+
T Consensus       184 ~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~-----~~~~~~~~~~~--~~G~~~~-p~~a-~l~~rgl~--Tl~lR  252 (388)
T PRK08861        184 KPLELGADFVIHSTTKYINGHSDVIGGVLITKTK-----EHAEELAWWGN--CIGATGT-PFDS-YMTLRGIR--TLGAR  252 (388)
T ss_pred             CCcccCCCEEEeecceeccCCCcceeEEEEecHH-----HHHHHHHHHHh--ccCCCCC-hHHH-HHHHhcCC--CHHHH
Confidence            4555 79999999999999875   688888653     56555543211  1122111 1111 12233332  34677


Q ss_pred             HHHHHHHHHHHHHHHHhc-CcE-EecCCCC---------------CceEEEccCCCCCcHHHHHHhHhcC---CeEEcCC
Q 009673          376 QNKVVSNCRALASRLVEL-GYK-LVSGGSD---------------NHLVLVDLRPMGIDGARVEKILDMA---SITLNKN  435 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~~-G~~-v~~~gt~---------------~~~~~v~~~~~~i~~~~~~~~L~~~---GI~v~~~  435 (529)
                      +++..+|+..+++.|++. .+. |..|+-.               ..++.+++.  + +.+.+.+.++..   .+.++.+
T Consensus       253 ~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~--~-~~~~~~~f~~~l~l~~~~~s~G  329 (388)
T PRK08861        253 MRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFA--G-SFEQLKVFVKALALFSLAESLG  329 (388)
T ss_pred             HHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeC--C-CHHHHHHHHhcCCcceEccCCC
Confidence            899999999999999884 332 3323211               123344443  2 234445555443   3333332


Q ss_pred             C------CCCCCC------------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          436 S------VPGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       436 ~------~Pg~~~------------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      .      .|....            ...++-||+++.        -||.+.+.+-|.+++...
T Consensus       330 ~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG--------lE~~~dli~Dl~~al~~~  384 (388)
T PRK08861        330 GVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVG--------LEDAQDLIADLDQAFAKA  384 (388)
T ss_pred             CCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeC--------cCCHHHHHHHHHHHHHHH
Confidence            1      122110            012356898864        378888888888887654

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.82  E-value=1.9e-18  Score=180.95  Aligned_cols=215  Identities=25%  Similarity=0.263  Sum_probs=149.0

Q ss_pred             chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673          143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI  222 (529)
Q Consensus       143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~  222 (529)
                      ++..+++|    +++++++|.+.     .+.++||++|+..++.++++|||+|++.++.|++.+...    ...+...|.
T Consensus        60 ~p~~~~le----~~la~l~g~~~-----~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~----~~~~~~~G~  126 (390)
T PRK08133         60 NPTVTMFQ----ERLAALEGAEA-----CVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLF----EKIFARFGI  126 (390)
T ss_pred             ChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHH----HHHHHHcCc
Confidence            45566666    67889999875     255688889999999999999999999998887654211    011222343


Q ss_pred             eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673          223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD  300 (529)
Q Consensus       223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~  300 (529)
                        +++.++++      |++++++.+++ ++|+|+++.++||+  ..|+++|.++|+++|+++++|+++..+..     ..
T Consensus       127 --~v~~vd~~------d~~~l~~~i~~-~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~-----~~  192 (390)
T PRK08133        127 --ETTFVDLT------DLDAWRAAVRP-NTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPAL-----QQ  192 (390)
T ss_pred             --EEEEECCC------CHHHHHHhcCc-CCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCccccc-----CC
Confidence              66665542      78999999987 89999999888886  78999999999999999999999765432     23


Q ss_pred             CCC-cccEEEecccccccCC--C-CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHH
Q 009673          301 PFK-YCDVVTTTTHKSLRGP--R-GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ  376 (529)
Q Consensus       301 ~~~-~aDiv~~S~hK~l~Gp--r-gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~  376 (529)
                      |+. ++|++++|+||++.|+  + ||+++.++      ++.+++......  .|. ......+. .+++.+  ..+..+.
T Consensus       193 pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~------~~~~~~~~~~~~--~g~-~~~~~~a~-~~l~gl--~tl~~R~  260 (390)
T PRK08133        193 PLKLGADVVIHSATKYLDGQGRVLGGAVVGSK------ELMEEVFGFLRT--AGP-TLSPFNAW-VFLKGL--ETLSLRM  260 (390)
T ss_pred             chhhCCcEEEeecceeecCCcceEeEEEEcCH------HHHHHHHHHHHH--hCC-CCCHHHHH-HHHccc--chHHHHH
Confidence            344 6899999999998653  3 48888776      444433221111  111 11122221 123322  2456778


Q ss_pred             HHHHHHHHHHHHHHHhc-CcE
Q 009673          377 NKVVSNCRALASRLVEL-GYK  396 (529)
Q Consensus       377 ~~i~~~a~~l~~~L~~~-G~~  396 (529)
                      ++..+|++.+.+.|++. ++.
T Consensus       261 ~~~~~~a~~la~~L~~~p~v~  281 (390)
T PRK08133        261 EAHSANALALAEWLEAHPGVE  281 (390)
T ss_pred             HHHHHHHHHHHHHHHhCCCee
Confidence            88889999999999883 554

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.82  E-value=2.2e-18  Score=179.76  Aligned_cols=288  Identities=20%  Similarity=0.186  Sum_probs=188.0

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      |++..+++|    +++++++|.+.     .+.++||+.|+.+++. +++|||+|+++++.|++......    ......|
T Consensus        45 ~~p~~~~le----~~la~l~g~~~-----~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~----~~~~~~G  110 (378)
T TIGR01329        45 GNPTRTALE----SLLAKLDKADR-----AFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLT----QVVPRSG  110 (378)
T ss_pred             CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHH----HHHHHcC
Confidence            455566776    77889999854     3556889888877665 88999999999988765432100    0112234


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  +++.++.      .|++++++++++ ++|+|++++++||+  ..|+++|+++|+++|+++++|++|..+..     .
T Consensus       111 ~--~v~~vd~------~d~~~le~~i~~-~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~-----~  176 (378)
T TIGR01329       111 V--VVVHVDT------TDLDKVKAALGP-KTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLL-----C  176 (378)
T ss_pred             c--EEEEeCC------CCHHHHHHhcCc-CceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence            3  5555443      389999999987 89999999888886  77999999999999999999999866543     2


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhccccc-CCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKV  374 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~  374 (529)
                      .++. ++|++++|+||++.|+.   +|+++++++     ++.+++..... .+....|   .-+.  ..+..+  ..+..
T Consensus       177 ~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~-----~~~~~~~~~~~~~G~~~~~---~~a~--l~~~~l--~tl~~  244 (378)
T TIGR01329       177 NPLELGADIVYHSATKFLAGHSDVMAGVLAVKGE-----EIAKKVYFLQNSTGSGLAP---FDCW--LLLRGI--KTLAI  244 (378)
T ss_pred             ChhhcCCcEEEEecceeccCCccceeEEEEeCcH-----HHHHHHHHHHHhcCCcCCH---HHHH--HHHccC--CCHHH
Confidence            3444 78999999999998864   689988764     55555543322 1211111   1111  112222  34577


Q ss_pred             HHHHHHHHHHHHHHHHHhc-Cc-EEecCCC---------------CCceEEEccCCCCCc-HHHHHHhHhcCCeEEcCCC
Q 009673          375 YQNKVVSNCRALASRLVEL-GY-KLVSGGS---------------DNHLVLVDLRPMGID-GARVEKILDMASITLNKNS  436 (529)
Q Consensus       375 ~~~~i~~~a~~l~~~L~~~-G~-~v~~~gt---------------~~~~~~v~~~~~~i~-~~~~~~~L~~~GI~v~~~~  436 (529)
                      +.++..+|+..+.+.|++. .+ .+..++-               ...++.+++  .+.+ ...+...|+..+|.++.+.
T Consensus       245 R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~--~~~~~~~~~~~~L~~~~i~~s~G~  322 (378)
T TIGR01329       245 RIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFET--GSVALSKRLVEATKLFSITVSFGS  322 (378)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEE--CCHHHHHHHHHhCcCcccccCCCC
Confidence            7889999999999999873 22 2222210               112344444  2333 4567777777888776643


Q ss_pred             C------CCCCC--C----------CCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          437 V------PGDKS--A----------LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       437 ~------Pg~~~--~----------~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +      |-...  .          ..++-||+|+.        -||.+.+.+-|.+++..
T Consensus       323 ~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG--------lE~~~dl~~dl~~al~~  375 (378)
T TIGR01329       323 VNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVG--------IEDVDDLISDLDIAFVT  375 (378)
T ss_pred             CCceeeCCCccccccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHHHHh
Confidence            2      32110  0          12456898864        37788888888877763

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.82  E-value=2.1e-18  Score=181.36  Aligned_cols=217  Identities=18%  Similarity=0.192  Sum_probs=151.0

Q ss_pred             chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673          143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI  222 (529)
Q Consensus       143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~  222 (529)
                      ++...++|    +.+++++|.+.     .|.++||+.|+..++.++++|||+|++..+.|++.+...    ...+...|.
T Consensus        64 ~p~~~~le----~~lA~l~g~~~-----~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~----~~~~~~~G~  130 (403)
T PRK07503         64 NPTLALLE----QRMASLEGGEA-----AVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFL----HHGLGEFGV  130 (403)
T ss_pred             CchHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHH----HHHHhhCCE
Confidence            34566777    67889999875     355689999999999999999999999988776543211    011222343


Q ss_pred             eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673          223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD  300 (529)
Q Consensus       223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~  300 (529)
                        ++..+++      .|++++++.+++ ++|+|++..++||+  ..|+++|.++|+++|++||+|++|..+..     ..
T Consensus       131 --~v~~vd~------~d~~~l~~~i~~-~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~-----~~  196 (403)
T PRK07503        131 --TVRHVDL------TDPAALKAAISD-KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYL-----QR  196 (403)
T ss_pred             --EEEEeCC------CCHHHHHHhcCc-cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-----CC
Confidence              5555543      378999999987 89999998888887  77999999999999999999999865532     22


Q ss_pred             CCC-cccEEEecccccccCC---CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHH
Q 009673          301 PFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ  376 (529)
Q Consensus       301 ~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~  376 (529)
                      ++. ++|++++|++|+++|+   +||+++.++      ++.+++.........|.......+++  ++..+  ..+..+.
T Consensus       197 ~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~------~l~~~l~~~~~~~~~g~~~s~~~a~l--~l~~L--~tl~~r~  266 (403)
T PRK07503        197 PLELGADLVVHSATKYLGGHGDITAGLVVGGK------ALADRIRLEGLKDMTGAVMSPFDAFL--LMRGL--KTLALRM  266 (403)
T ss_pred             chhhCCCEEEccccccccCCCceeEEEEEcCH------HHHHHHHhhhHHhCcCCCCCHHHHHH--HHcCc--chHHHHH
Confidence            333 6899999999999764   378888665      66666642211112222122222222  23332  2345667


Q ss_pred             HHHHHHHHHHHHHHHhc-CcE
Q 009673          377 NKVVSNCRALASRLVEL-GYK  396 (529)
Q Consensus       377 ~~i~~~a~~l~~~L~~~-G~~  396 (529)
                      ++..+|++.+.+.|.+. .+.
T Consensus       267 ~~~~~na~~~a~~L~~~p~v~  287 (403)
T PRK07503        267 DRHCASAQAVAEWLARHPAVE  287 (403)
T ss_pred             HHHHHHHHHHHHHHHhCCCcc
Confidence            78889999999999883 443

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.82  E-value=1.6e-18  Score=180.30  Aligned_cols=291  Identities=14%  Similarity=0.088  Sum_probs=182.8

Q ss_pred             CCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccc
Q 009673          141 GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT  220 (529)
Q Consensus       141 ~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~  220 (529)
                      .|++..+.+|    +.++++.|.+.     .+.+.||++|+..++.++++|||+|+++++.|++.....    .......
T Consensus        47 ~gnPt~~~lE----~~lA~l~g~~~-----~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~----~~~~~~~  113 (377)
T TIGR01324        47 RGTLTHFALQ----DAMCELEGGAG-----CYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFC----DIVLKRM  113 (377)
T ss_pred             CCCccHHHHH----HHHHHHhCCCc-----EEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHH----HHHHHhc
Confidence            3667778888    67788899764     245678889999999999999999999988775432100    0011122


Q ss_pred             cceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccccccccc
Q 009673          221 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV  298 (529)
Q Consensus       221 g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~  298 (529)
                      |.  ++..++.+      +.+++++.+++ ++|+|++++++||+  ..|+++|+++|+++|+++++|++|..|...    
T Consensus       114 gi--~v~~~d~~------~~e~l~~~i~~-~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~----  180 (377)
T TIGR01324       114 GV--DITYYDPL------IGEDIATLIQP-NTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLF----  180 (377)
T ss_pred             Cc--EEEEECCC------CHHHHHHhcCC-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcccccc----
Confidence            33  44443321      23789998887 89999999888886  679999999999999999999999887653    


Q ss_pred             CCCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673          299 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV  374 (529)
Q Consensus       299 ~~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~  374 (529)
                       .|++ ++|++++|+||++.|+.   ||++++++      +..+++.....  ..|....+ ..+. ..++.+.  .+..
T Consensus       181 -~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~------~~~~~l~~~~~--~~G~~l~p-~~a~-~~~rgl~--tl~~  247 (377)
T TIGR01324       181 -KPLEHGVDISIQAGTKYLVGHSDIMIGTVVANA------RTWDQLREHSY--LMGQMVDA-DDAY-TTLRGLR--TLGV  247 (377)
T ss_pred             -CccccCceEEEecCceeccCCCCceEEEEEeCH------HHHHHHHHHHH--HhCCCCCH-HHHH-HHHhhhh--hHHH
Confidence             2444 79999999999998865   48888876      44444432111  11221111 1111 1222221  2345


Q ss_pred             HHHHHHHHHHHHHHHHHhc-Cc-EEecCC---------------CCCceEEEccCCCCC-cHHHHHHhHhcCCeEEcCCC
Q 009673          375 YQNKVVSNCRALASRLVEL-GY-KLVSGG---------------SDNHLVLVDLRPMGI-DGARVEKILDMASITLNKNS  436 (529)
Q Consensus       375 ~~~~i~~~a~~l~~~L~~~-G~-~v~~~g---------------t~~~~~~v~~~~~~i-~~~~~~~~L~~~GI~v~~~~  436 (529)
                      ++++..+|+..+++.|++. .+ .+..++               ...+++.+++...+. ....+.+.|+..++.++-+.
T Consensus       248 R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~~~~~slG~  327 (377)
T TIGR01324       248 RLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLFGLGYSWGG  327 (377)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEeccCCC
Confidence            6888899999999999883 33 233221               123455556542111 12345555655666665432


Q ss_pred             C------CC-CCC-------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          437 V------PG-DKS-------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       437 ~------Pg-~~~-------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +      |. ...       ...++-||+++.        -||.+.+.+-|.+++.
T Consensus       328 ~~sl~~~~~~~~~~~~~~~~~~~~~liR~svG--------lE~~~dl~~dl~~al~  375 (377)
T TIGR01324       328 YESLALCNQPELGHRPNIKRNLEGPLIRVHIG--------LENVDDLKADLKAGFE  375 (377)
T ss_pred             ccceeecCCCCCCHHHHHhccCCCCEEEEEeC--------CCCHHHHHHHHHHHHh
Confidence            1      11 000       011245898864        2677777777777664

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.82  E-value=6.5e-18  Score=177.43  Aligned_cols=213  Identities=23%  Similarity=0.237  Sum_probs=149.5

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..+++|    ++++++.|.+.     .|.++||++|+..++.++++|||+|+++++.|++.... +   .......|
T Consensus        58 ~~p~~~~Le----~~lA~l~g~~~-----~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~-~---~~~~~~~g  124 (405)
T PRK08776         58 GNPTRDLLG----EALAELEGGAG-----GVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRL-F---NALAKKGH  124 (405)
T ss_pred             CChHHHHHH----HHHHHHhCCCc-----eEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHH-H---HHHHHhcC
Confidence            345556666    67888899754     46678999999999999999999999999887653211 0   00111123


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                        .+++.++      ..|++++++.+++ ++|+|++++|+||+  ..|+++|.++|+++|+++++|++|..+..     .
T Consensus       125 --~~v~~v~------~~d~~~l~~~i~~-~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~-----~  190 (405)
T PRK08776        125 --FALITAD------LTDPRSLADALAQ-SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPAL-----Q  190 (405)
T ss_pred             --cEEEEEC------CCCHHHHHHhcCc-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence              2444433      2488999999977 89999999999887  78999999999999999999999865432     2


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccc-cCCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKV  374 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~  374 (529)
                      .|+. ++|++++|+||++.|+.   +|+++++++     ++.+++.... ..+..  ++  .+.+. ..++.+  ..+..
T Consensus       191 ~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~-----~l~~~l~~~~~~~g~~--~s--~~~a~-l~~~gl--~tl~~  258 (405)
T PRK08776        191 KPLEFGADLVLHSTTKYINGHSDVVGGAVVARDA-----ELHQQLVWWANALGLT--GS--PFDAF-LTLRGL--RTLDA  258 (405)
T ss_pred             CcccccCCEEEecCceeecCCCCceEEEEEeCCH-----HHHHHHHHHHHhcCCC--CC--HHHHH-HHHhhh--CcHHH
Confidence            3444 78999999999998774   588877654     5666554321 11221  11  12111 122222  34577


Q ss_pred             HHHHHHHHHHHHHHHHHhc
Q 009673          375 YQNKVVSNCRALASRLVEL  393 (529)
Q Consensus       375 ~~~~i~~~a~~l~~~L~~~  393 (529)
                      ++++..+|+..+.+.|++.
T Consensus       259 r~~~~~~na~~la~~L~~~  277 (405)
T PRK08776        259 RLRVHQENADAIAALLDGH  277 (405)
T ss_pred             HHHHHHHHHHHHHHHHHcC
Confidence            8899999999999999873

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=99.82  E-value=1.8e-18  Score=177.97  Aligned_cols=265  Identities=18%  Similarity=0.181  Sum_probs=173.4

Q ss_pred             HHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC
Q 009673          154 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD  232 (529)
Q Consensus       154 ~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~  232 (529)
                      ++.+++++|++..   -+|.+++|+ +++..+ ..+++||| |++.+|.|..+.        ..+...|.  ++++++.+
T Consensus        59 ~~~ia~~~~~~~~---~~I~i~~Gs~e~i~~l-~~~~~~g~-v~v~~P~y~~y~--------~~~~~~g~--~~~~v~~~  123 (339)
T PRK06959         59 AACAARYYGAPDA---AHVLPVAGSQAAIRAL-PALLPRGR-VGIAPLAYSEYA--------PAFARHGH--RVVPLDEA  123 (339)
T ss_pred             HHHHHHHhCCCCc---ccEEECcCHHHHHHHH-HHhcCCCe-EEEcCCCcHHHH--------HHHHHCCC--EEEeeccc
Confidence            4778899999742   257779998 777644 55678887 777888765432        13344554  66665543


Q ss_pred             CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHH---HHHhCCEEEEecccccccccccccCCCC-Ccc-
Q 009673          233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQI---ADAVGALLMMDMAHISGLVAASVVADPF-KYC-  305 (529)
Q Consensus       233 ~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~i---a~~~g~~livD~ah~~Gli~~~~~~~~~-~~a-  305 (529)
                      .       +.+    .+ +++++++++||||+  ..+.+++.++   |++++.++|+|+++. .+...... ..+ .+. 
T Consensus       124 ~-------~~~----~~-~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~-~~~~~~s~-~~~~~~~~  189 (339)
T PRK06959        124 A-------DTL----PA-ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFA-DTLPAASL-AAHTDRPG  189 (339)
T ss_pred             c-------hhc----cc-cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCc-cCCCcccc-hhccCCCC
Confidence            1       222    22 45788888899997  5565555554   567899999999854 33321000 011 111 


Q ss_pred             cEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchH-HHHHHHHHHH
Q 009673          306 DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSN  382 (529)
Q Consensus       306 Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~~  382 (529)
                      -+++.|++|.+  +|.|.||+++++      ++.+.+.+...+..  .+.. ...+...+|+   ..++ ++.++++.++
T Consensus       190 vi~l~SfSK~~gl~GlRiGy~v~~~------~li~~l~~~~~~~~--vs~~-~q~a~~~~L~---~~~~~~~~~~~~~~~  257 (339)
T PRK06959        190 LVVLRSVGKFFGLAGVRAGFVLAAP------ALLAALRDALGAWT--VSGP-ARHAVRAAFA---DAAWQAAMRERLAAD  257 (339)
T ss_pred             EEEEecChhhcCCcchheEEEecCH------HHHHHHHHhcCCCC--CcHH-HHHHHHHHhC---cHHHHHHHHHHHHHH
Confidence            27889999986  789999999987      78777766543322  2122 2222333443   2333 6677888889


Q ss_pred             HHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCC
Q 009673          383 CRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS  462 (529)
Q Consensus       383 a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~  462 (529)
                      ++.+.+.|++.|+.+..   ...++|+++.    +..++.+.|.++||.|...   +     .++++||++.      .+
T Consensus       258 r~~l~~~L~~~g~~~~~---~~~f~~~~~~----~~~~l~~~l~~~GI~vr~~---~-----~~~~lRisi~------~~  316 (339)
T PRK06959        258 GARLAALLRAHGFAVHA---TPLFSWTDDP----RAAALHAALARRGIWTRYF---A-----PPPSVRFGLP------AD  316 (339)
T ss_pred             HHHHHHHHHHCCCCccC---cceEEEEeCC----CHHHHHHHHHhCCeEEEEC---C-----CCCeEEEECC------CC
Confidence            99999999998887653   2355677653    3567888888999999631   1     2468999852      23


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 009673          463 EKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       463 ~~d~~~la~~i~~~~~~~  480 (529)
                      ++|++++.+.|++++...
T Consensus       317 ~~e~~~l~~al~~~~~~~  334 (339)
T PRK06959        317 EAEWQRLEDALAECVPTL  334 (339)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            689999999998876543

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.82  E-value=2.4e-18  Score=179.77  Aligned_cols=213  Identities=19%  Similarity=0.167  Sum_probs=148.9

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++.+.++|    +.+++++|.+.     .|.++||+.|+..++.++++|||+|+++++.|++.....     +.+...|
T Consensus        51 ~np~~~~lE----~~lA~l~g~~~-----~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~-----~~~~~~g  116 (385)
T PRK08574         51 ENPTLRPLE----EALAKLEGGVD-----ALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLL-----KSLEKFG  116 (385)
T ss_pred             CCccHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHH-----HHhhccC
Confidence            456677888    67889999864     245688999999999999999999999998887653211     0111223


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  ++..+       .+|++++++++++.++|+|+++.++||+  ..|+++|+++|+++|+++++|++|..++..     
T Consensus       117 ~--~v~~~-------~~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~-----  182 (385)
T PRK08574        117 V--KVVLA-------YPSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLY-----  182 (385)
T ss_pred             c--EEEEE-------CCCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC-----
Confidence            2  33332       2468999999876579999999888887  789999999999999999999998777543     


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      .++. ++|++++|+||++.|+.   ||+++++++     ++.+++......  .|.......++  .+++.+  ..+..+
T Consensus       183 ~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~-----~~~~~~~~~~~~--~g~~~~p~~a~--l~l~~l--~tL~~R  251 (385)
T PRK08574        183 RPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSG-----EFLEELWEWRRR--LGTIMQPFEAY--LVLRGL--KTLEVR  251 (385)
T ss_pred             ChhhhCCcEEEeeCceeecCCCCceeEEEEECcH-----HHHHHHHHHHHh--cCCCCCHHHHH--HHHccc--CcHHHH
Confidence            2333 68999999999998864   686666553     565555422111  12111111222  223332  235677


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q 009673          376 QNKVVSNCRALASRLVEL  393 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~~  393 (529)
                      .++..+|+..+.+.|++.
T Consensus       252 ~~~~~~na~~la~~L~~~  269 (385)
T PRK08574        252 FERQCRNAMAIAEFLSEH  269 (385)
T ss_pred             HHHHHHHHHHHHHHHHcC
Confidence            888899999999999873

>PRK15029 arginine decarboxylase; Provisional

Probab=99.82  E-value=2.3e-18  Score=189.88  Aligned_cols=296  Identities=15%  Similarity=0.099  Sum_probs=201.6

Q ss_pred             HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673          153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL  231 (529)
Q Consensus       153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v  231 (529)
                      +++.++++||++...+     .++|| .+|.++++++++|||+|++...+|-+.+ |       .+.++|+  .++++.-
T Consensus       210 Aq~~aA~~fgA~~t~F-----lvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~-~-------al~L~ga--~Pvyl~P  274 (755)
T PRK15029        210 SEKYAARVFGADRSWS-----VVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIE-Q-------GLILTGA--KPVYMVP  274 (755)
T ss_pred             HHHHHHHHhCCCcEEE-----EeCChhHHHHHHHHHhcCCCCEEEeecccHHHHH-H-------HHHHcCC--eEEEecc
Confidence            5588899999998532     36777 8999999999999999999887665543 1       3455665  5655432


Q ss_pred             C-CCC---CCCC-----HHHHHHHhhhc---------CCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEeccccccc
Q 009673          232 D-EST---GLVD-----YDMLEKTAILF---------RPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGL  292 (529)
Q Consensus       232 ~-~~~---~~iD-----~d~le~~i~~~---------~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gl  292 (529)
                      . .+.   +.++     ++.|++++..+         ||+++++.+|+|-+ ..|+++|.++|+++|++|++|+||++.+
T Consensus       275 ~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~  354 (755)
T PRK15029        275 SRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYA  354 (755)
T ss_pred             cccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECcccccc
Confidence            1 111   2345     89999988653         23488998888776 7799999999999999999999998876


Q ss_pred             ccccccC--CCC-------Cccc-EEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHH
Q 009673          293 VAASVVA--DPF-------KYCD-VVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLA  361 (529)
Q Consensus       293 i~~~~~~--~~~-------~~aD-iv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala  361 (529)
                      .+.+..+  +.+       .++| +++.|+||+|++... ++|..+...... + .++++.+..-..+.+|++..+|++-
T Consensus       355 ~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~i-d-~~r~~~~l~~~qSTSPSY~LmASLD  432 (755)
T PRK15029        355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAI-N-FSRFNQAYMMHATTSPLYAICASND  432 (755)
T ss_pred             ccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCcccc-C-HHHHHHHHHHHcCCCcHHHHHHHHH
Confidence            5544443  333       3688 999999999988766 788775520000 1 2344444333345789999999999


Q ss_pred             HHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-C------------------------------------------cEEe
Q 009673          362 VCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-G------------------------------------------YKLV  398 (529)
Q Consensus       362 ~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G------------------------------------------~~v~  398 (529)
                      +|..++.....++..++..+.+..+++.|.+. +                                          +.++
T Consensus       433 ~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (755)
T PRK15029        433 VAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVM  512 (755)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccccchhhhccccceeee
Confidence            88877654234566777777788888888662 2                                          2222


Q ss_pred             cCC---------------CCCceEEEccCCCCCcHH---------HHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccC
Q 009673          399 SGG---------------SDNHLVLVDLRPMGIDGA---------RVEKILDMASITLNKNSVPGDKSALVPGGIRIGSP  454 (529)
Q Consensus       399 ~~g---------------t~~~~~~v~~~~~~i~~~---------~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~  454 (529)
                      .++               -|.--+++.++..+.+|.         .+.++|+++||.+....         ...+=    
T Consensus       513 ~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~---------~~~vL----  579 (755)
T PRK15029        513 HPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT---------DFQIM----  579 (755)
T ss_pred             cccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEecC---------CCeEE----
Confidence            110               011113344444455665         89999999999997531         12222    


Q ss_pred             CCccCCCCHHHHHHHHHHHHHHHH
Q 009673          455 AMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       455 ~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .+.+.|.++++++++.+.|.+.-+
T Consensus       580 ~l~s~g~t~~~~~~L~~aL~~~~~  603 (755)
T PRK15029        580 FLFSMGVTRGKWGTLVNTLCSFKR  603 (755)
T ss_pred             EEeCCCCCHHHHHHHHHHHHHHHH
Confidence            244557788999999998887643

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=99.82  E-value=5e-18  Score=174.15  Aligned_cols=288  Identities=20%  Similarity=0.231  Sum_probs=179.8

Q ss_pred             cceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHH
Q 009673          103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PAN  181 (529)
Q Consensus       103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~  181 (529)
                      +.+++..++|+.++.+.+.....+ ..    ||.      .. ..+++    +++++++|.+++    +|.+++|+ +++
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~-~~----y~~------~~-~~~lr----~~la~~~~~~~~----~i~~t~G~~~~i   77 (330)
T TIGR01140        18 DWLDFSTGINPLGPPVPPIPASAW-AR----YPD------PE-YDELR----AAAAAYYGLPAA----SVLPVNGAQEAI   77 (330)
T ss_pred             heeEccccCCCCCCChhhcchHHH-hh----CCC------cc-HHHHH----HHHHHHhCCChh----hEEECCCHHHHH
Confidence            457787777765433333322211 12    221      11 23444    777888898764    56678988 666


Q ss_pred             HHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 009673          182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA  261 (529)
Q Consensus       182 ~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~  261 (529)
                      ..+ ..++.+| .|++.+|.|..+..        .....|.  +++.++        |++++++.+.  ++++|+++.|+
T Consensus        78 ~~~-~~~l~~g-~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~--------d~~~l~~~~~--~~~~v~i~~p~  135 (330)
T TIGR01140        78 YLL-PRLLAPG-RVLVLAPTYSEYAR--------AWRAAGH--EVVELP--------DLDRLPAALE--ELDVLVLCNPN  135 (330)
T ss_pred             HHH-HHHhCCC-eEEEeCCCcHHHHH--------HHHHcCC--EEEEeC--------CHHHHHhhcc--cCCEEEEeCCC
Confidence            665 4446788 68888887754421        2223343  555543        7899998883  57888888888


Q ss_pred             CCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccc--cCCCCeEEEeeCCCcc
Q 009673          262 YPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVL  332 (529)
Q Consensus       262 ~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l--~GprgG~i~~~~~~~~  332 (529)
                      ||+  ..+   +++|+++|+++|+++|+|++|. ++..........+  ..+++++|+||++  +|.|.||+++++    
T Consensus       136 NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~----  210 (330)
T TIGR01140       136 NPTGRLIPPETLLALAARLRARGGWLVVDEAFI-DFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHP----  210 (330)
T ss_pred             CCCCCCCCHHHHHHHHHHhHhcCCEEEEECccc-ccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCCH----
Confidence            887  556   6677888899999999999964 3332210000001  2358999999997  567779999987    


Q ss_pred             hhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchH-HHHHHHHHHHHHHHHHHHHhcC-cEEecCCCCCceEEEc
Q 009673          333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVELG-YKLVSGGSDNHLVLVD  410 (529)
Q Consensus       333 ~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~~a~~l~~~L~~~G-~~v~~~gt~~~~~~v~  410 (529)
                        ++.+.+...... . + .+....+++...++   ..++ +..++++.++++.+.+.|++.+ +.+..+  ...+.|++
T Consensus       211 --~~~~~l~~~~~~-~-~-~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~f~~~~  280 (330)
T TIGR01140       211 --ALLARLREALGP-W-T-VNGPARAAGRAALA---DTAWQAATRARLAAERARLAALLARLGGLEVVGG--TALFLLVR  280 (330)
T ss_pred             --HHHHHHHhcCCC-C-C-chHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHHhCCCceECCC--CCeEEEEE
Confidence              677777654322 2 1 12222222222332   3344 6667888899999999998876 554432  34667777


Q ss_pred             cCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccC
Q 009673          411 LRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSP  454 (529)
Q Consensus       411 ~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~  454 (529)
                      +.    +..++.+.|.++||.+..+..++   ....++|||++.
T Consensus       281 ~~----~~~~l~~~l~~~gi~v~pg~~f~---~~~~~~iRi~~~  317 (330)
T TIGR01140       281 TP----DAAALHEALARRGILIRDFDNFP---GLDPRYLRFALP  317 (330)
T ss_pred             cC----CHHHHHHHHHHCCEEEEECCCCC---CCCCCEEEEEec
Confidence            64    24667777878899995433221   123468999864

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.82  E-value=3.7e-18  Score=177.79  Aligned_cols=215  Identities=22%  Similarity=0.211  Sum_probs=151.7

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..+++|    +++++++|.+.     .+.++||++|+..++.++++|||+|++..+.|++......    ......|
T Consensus        38 ~~p~~~~le----~~la~l~g~~~-----a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~----~~~~~~g  104 (369)
T cd00614          38 GNPTVDALE----KKLAALEGGEA-----ALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFE----RLLPKLG  104 (369)
T ss_pred             CChhHHHHH----HHHHHHHCCCC-----EEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHH----HHHhhcC
Confidence            456677887    67888999764     3556899999999999999999999999987765431100    0111234


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  ++..++.+      |++++++.+++ ++++|++.+++||+  ..|+++|.++|+++|+++++|++|..+..     .
T Consensus       105 ~--~~~~v~~~------d~~~l~~~i~~-~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~-----~  170 (369)
T cd00614         105 I--EVTFVDPD------DPEALEAAIKP-ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYL-----Q  170 (369)
T ss_pred             e--EEEEeCCC------CHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhc-----C
Confidence            3  55554432      58999999987 89999999888876  77999999999999999999999876643     2


Q ss_pred             CCCC-cccEEEecccccccCC---CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      .++. ++|++++|++|++.|+   ++|+++++++     ++.+++......  .|+......++  .+++.+  ..+..+
T Consensus       171 ~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~-----~l~~~l~~~~~~--~g~~~~p~~a~--~~l~~l--~tl~~r  239 (369)
T cd00614         171 RPLELGADIVVHSATKYIGGHSDVIAGVVVGSGE-----ALIQRLRFLRLA--LGTILSPFDAW--LLLRGL--KTLPLR  239 (369)
T ss_pred             ChhhhCCcEEEeccceeccCCCCceEEEEEeCcH-----HHHHHHHHHHHh--hCCCCCHHHHH--HHHcCC--CCHHHH
Confidence            3444 6899999999999764   4799999773     455555432211  11111111111  123332  234567


Q ss_pred             HHHHHHHHHHHHHHHHhcC
Q 009673          376 QNKVVSNCRALASRLVELG  394 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~~G  394 (529)
                      .++..+|++.+.+.|++.+
T Consensus       240 ~~~~~~na~~la~~L~~~~  258 (369)
T cd00614         240 MERHSENALKVAEFLEKHP  258 (369)
T ss_pred             HHHHHHHHHHHHHHHHcCC
Confidence            8889999999999998853

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>PRK08637 hypothetical protein; Provisional

Probab=99.81  E-value=4.2e-18  Score=178.68  Aligned_cols=276  Identities=16%  Similarity=0.175  Sum_probs=168.0

Q ss_pred             eeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccc-ccccceEEEEEcccCCCCCCCCHHHHHHHhh
Q 009673          171 NVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEKTAI  248 (529)
Q Consensus       171 ~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i-~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~  248 (529)
                      +|.+|+|+ +++..++.++++|||+|++++|.|+.+..        .+ ...|.  ++++++++.+++.+|++++++.++
T Consensus        71 ~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~~g~--~vv~v~~~~~~~~~d~~~l~~~~~  140 (388)
T PRK08637         71 LPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKL--------TFNTRRGA--EIVTYPIFDEDGGFDTDALKEALQ  140 (388)
T ss_pred             eeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHhcCC--EEEEecccCCCCcCCHHHHHHHHH
Confidence            56678888 89999999999999999999998765431        11 12454  677777732446789999998886


Q ss_pred             ---hcCCcEEEEcCCCCCC--CC---CHHHHHHHHHH-----hCCEEEEecccccccccccccCCC-C----C-cccE--
Q 009673          249 ---LFRPKLIIAGASAYPR--DF---DYPRMRQIADA-----VGALLMMDMAHISGLVAASVVADP-F----K-YCDV--  307 (529)
Q Consensus       249 ---~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~-----~g~~livD~ah~~Gli~~~~~~~~-~----~-~aDi--  307 (529)
                         +...+++++++|+||+  ..   .+++|.++|++     |+++||+|++ |.++.+.+....+ +    + ...+  
T Consensus       141 ~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~-Y~~l~~~~~~~~~~~~~~~~~~~~vi~  219 (388)
T PRK08637        141 AAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDA-YFGLFYEDSYKESLFAALANLHSNILA  219 (388)
T ss_pred             hhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEeccc-chhcccCCccchhhHHHhhcccccceE
Confidence               2133456677899997  33   46677777765     8999999998 4555544321111 1    1 1122  


Q ss_pred             -EEeccccc--ccCCCCeEEEeeCCCcchhHHHhhhccc----ccCCCCCCChHHHHHHHHHHHHHhcCchHH----HHH
Q 009673          308 -VTTTTHKS--LRGPRGGMIFFKKDPVLGVELESAINNA----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFK----VYQ  376 (529)
Q Consensus       308 -v~~S~hK~--l~GprgG~i~~~~~~~~~~~l~~~i~~~----~~p~~~g~p~~~~iaala~al~~~~~~~~~----~~~  376 (529)
                       .+.|++|.  ++|.|.||++++.......++.+.+...    ......+.+.. ..+++..++.   ...+.    +..
T Consensus       220 i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~-~q~a~~~~l~---~~~~~~~~~~~~  295 (388)
T PRK08637        220 VKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHP-SQSAVLRALN---SPEFDKEKQEKF  295 (388)
T ss_pred             EEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCCCcH-HHHHHHHHhC---CHHHHHHHHHHH
Confidence             33599996  3899999998653000000455544321    11111222233 2233333342   22332    233


Q ss_pred             HHHHHHHHHHHHHHHhc----CcEEecCCCCCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEE
Q 009673          377 NKVVSNCRALASRLVEL----GYKLVSGGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRI  451 (529)
Q Consensus       377 ~~i~~~a~~l~~~L~~~----G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRi  451 (529)
                      ..+.++++.+.+.|.+.    ++.+..+ ..+.++|+.+.  +.+..++.+.| +++||.+..    +     .++++||
T Consensus       296 ~~~~~r~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~l~--~~~~~~l~~~l~~~~gv~~~~----~-----~~~~iRi  363 (388)
T PRK08637        296 QILKERYEKTKEVLYDGKYDDAWQAYPF-NSGYFMCLKLK--GVDAEELRVHLLEKYGIGTIA----L-----NETDLRI  363 (388)
T ss_pred             HHHHHHHHHHHHHHHhhCCCCCcccccc-cceEEEEecCC--hHHHHHHHHHHhhhcceEEEe----c-----cCCceEE
Confidence            44556666677777654    4555443 23456677774  33556665555 678998742    1     2568999


Q ss_pred             ccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          452 GSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       452 g~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ++..     ..++++++.++.|.++++
T Consensus       364 ~~~~-----~~~~~i~~~~~~l~~~~~  385 (388)
T PRK08637        364 AFSC-----VEEEDIPELFDSIYKAIK  385 (388)
T ss_pred             Eeec-----CCHHHHHHHHHHHHHHHH
Confidence            8753     347899999998888775

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.81  E-value=6e-18  Score=187.94  Aligned_cols=305  Identities=20%  Similarity=0.241  Sum_probs=196.5

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC-------C-CCEEEEcCCCCCccccccccccccc
Q 009673          145 YIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-------P-HDRIMGLDLPHGGHLSHGFMTPKRR  216 (529)
Q Consensus       145 ~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~-------p-GD~Vl~~~~~~~g~~s~g~~~~~~~  216 (529)
                      +.+.+.+. ++++++++|.+.    +.+++.+|+.+++++++++-.       + .++|+++...|+.+..        .
T Consensus       541 ~lq~i~el-q~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpa--------s  607 (954)
T PRK12566        541 YRAMIDEL-EAWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPA--------S  607 (954)
T ss_pred             HHHHHHHH-HHHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHH--------H
Confidence            44555543 389999999997    589999999888888877632       3 3567777766655532        1


Q ss_pred             cccccceEEEEEcccCCCCCCCCHHHHHHHhhhcC--CcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccc
Q 009673          217 VSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR--PKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGL  292 (529)
Q Consensus       217 i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~--pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gl  292 (529)
                      ....|  ++++.++.| ++|.+|+++|++++++.+  +.+|++.++++.+  ..++++|+++|+++|+++++|++|..++
T Consensus       608 a~~~G--ieVv~Vp~D-~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~  684 (954)
T PRK12566        608 AQMAG--MRVVIVECD-PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQ  684 (954)
T ss_pred             HHHCC--CEEEEeccC-CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhc
Confidence            22344  477777777 578999999999997434  4456666666554  4679999999999999999999998665


Q ss_pred             ccccccCCCCC-cccEEEecccccccCCCC-eEE-----EeeCCCcchhHHHhhhcccc---cCC---CCCC----ChHH
Q 009673          293 VAASVVADPFK-YCDVVTTTTHKSLRGPRG-GMI-----FFKKDPVLGVELESAINNAV---FPG---LQGG----PHNH  355 (529)
Q Consensus       293 i~~~~~~~~~~-~aDiv~~S~hK~l~Gprg-G~i-----~~~~~~~~~~~l~~~i~~~~---~p~---~~g~----p~~~  355 (529)
                      ...   ..|-+ ++||+++++||||++|+| |..     .+++      .+...+....   ..+   -.|+    +...
T Consensus       685 ~~l---~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~------~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gs  755 (954)
T PRK12566        685 VGL---ARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRA------HLAPFVANHPVVPVEGPDPNNGAVSAAPWGS  755 (954)
T ss_pred             cCC---CChhhcCCCEEEecCCcccCcCccCCCCccchhhhhh------hhhhhccCCCCcCCCCCCCCCCceeecccch
Confidence            532   22333 799999999999987776 333     2232      2222222110   000   0111    1111


Q ss_pred             -HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC---CCceEEEccCC----CCCcHHHHHHhHhc
Q 009673          356 -TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS---DNHLVLVDLRP----MGIDGARVEKILDM  427 (529)
Q Consensus       356 -~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt---~~~~~~v~~~~----~~i~~~~~~~~L~~  427 (529)
                       .++-.+.++-.....+.++.......|++++.+.|.+ ++.+...+.   ..|-+.+++.+    .+++..++.+.|.+
T Consensus       756 a~~l~~A~~Yi~~lG~eLk~aa~~ailnAnYla~rL~~-~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d  834 (954)
T PRK12566        756 ASILPISWMYIAMMGPQLADASEVAILSANYLANQLGG-AFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMD  834 (954)
T ss_pred             HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHhHh-hCCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHH
Confidence             1121222222222223444455557799999999977 555443221   12445566542    24666778888889


Q ss_pred             CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 009673          428 ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKK  485 (529)
Q Consensus       428 ~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~~~~  485 (529)
                      +||.....+.|      .++.+||+....++    ++|++++++.+..+.....++..
T Consensus       835 ~Gihapt~~fP------v~~~LmIepTE~es----keEIDrf~eAL~~I~~e~~~v~~  882 (954)
T PRK12566        835 YGFHAPTMSFP------VPGTLMVEPTESES----KAELDRFVEAMLSIRAEIGKVQE  882 (954)
T ss_pred             CCcEEeEEeec------cCCEEEEEeeeeCC----HHHHHHHHHHHHHHHHHHHHHHc
Confidence            99987543233      36789998766654    89999999999998887766643

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.81  E-value=4.2e-18  Score=177.08  Aligned_cols=284  Identities=17%  Similarity=0.178  Sum_probs=179.7

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..+++|    +.++++.|.+.     .+.+.||++|+..++ ++++|||+|+++++.|++.+...    .......|
T Consensus        50 ~~pt~~~le----~~la~l~g~~~-----~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~----~~~~~~~G  115 (366)
T PRK08247         50 GNPTRGVLE----QAIADLEGGDQ-----GFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLF----EEHWKKWN  115 (366)
T ss_pred             CCchHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHH----HHHhhccC
Confidence            455677777    67899999976     255688888888665 68899999999999887643211    01122334


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  ++..++.      .|++++++++++ ++++|++++|+||+  ..|+++|.++|+++|+++|+|+++..++.     .
T Consensus       116 ~--~v~~vd~------~d~~~l~~~i~~-~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~-----~  181 (366)
T PRK08247        116 V--RFVYVNT------ASLKAIEQAITP-NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVL-----Q  181 (366)
T ss_pred             c--eEEEECC------CCHHHHHHhccc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccc-----c
Confidence            3  5555442      489999999987 89999999999986  56899999999999999999999754432     2


Q ss_pred             CCCC-cccEEEecccccccCC---CCeEEEeeCCCcchhHHHhhhcccccC-CCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKV  374 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~p-~~~g~p~~~~iaala~al~~~~~~~~~~  374 (529)
                      .|+. ++|++++|++|++.|+   ++|+++.+++     ++.+++...... +..-+| ..+..    ++..+  ..+..
T Consensus       182 ~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~-----~l~~~~~~~~~~~g~~~s~-~~a~l----~~~~l--~tl~~  249 (366)
T PRK08247        182 RPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQ-----ELCERLAYYQNAAGAVLSP-FDSWL----LIRGM--KTLAL  249 (366)
T ss_pred             CchhcCCcEEEeecceeccCCCceeeeEEecChH-----HHHHHHHHHHHhcCCCCCh-HHHHH----HHhcc--CcHHH
Confidence            2333 6899999999999876   6799988743     565554432211 111111 11111    22222  23456


Q ss_pred             HHHHHHHHHHHHHHHHHh-cCcEE-ecCCCCCceEEEccCCCCCcHHHHHHhHhcC---CeEEcCC------CCCCCCC-
Q 009673          375 YQNKVVSNCRALASRLVE-LGYKL-VSGGSDNHLVLVDLRPMGIDGARVEKILDMA---SITLNKN------SVPGDKS-  442 (529)
Q Consensus       375 ~~~~i~~~a~~l~~~L~~-~G~~v-~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~---GI~v~~~------~~Pg~~~-  442 (529)
                      ++++..+|++.+.+.|++ .++.. ..++. ..++.+.+.  +  .+...++++..   .+.++-+      ..|+... 
T Consensus       250 r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~-gg~~sf~~~--~--~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~  324 (366)
T PRK08247        250 RMRQHEENAKAIAAFLNEQPGVTDVLYPGR-GGMLSFRLQ--D--EEWVNPFLKSLKLITFAESLGGVESFITYPATQTH  324 (366)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeeEEecCCc-CcEEEEEEC--C--HHHHHHHHHcCCcceEccCCCCCceEEECCccccc
Confidence            677789999999999998 47664 33422 234444553  1  23333333321   2222211      0344221 


Q ss_pred             -----------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          443 -----------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       443 -----------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                                 ...++-+|++..        -||.+.+.+-|.+++.
T Consensus       325 ~~~~~~~r~~~gi~~~~~R~svG--------lE~~~dl~~dl~~al~  363 (366)
T PRK08247        325 ADIPEEIRIANGVCNRLLRFSVG--------IENVEDLIADLKQAFK  363 (366)
T ss_pred             ccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHHHh
Confidence                       112345888754        3677888777777775

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.81  E-value=2.5e-18  Score=180.59  Aligned_cols=217  Identities=17%  Similarity=0.189  Sum_probs=151.5

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..+++|    +.+++++|.+.     .+.+.||+.|+..++.++++|||+|++.+..|++.+..    ....+...|
T Consensus        68 ~~p~~~~le----~~lA~l~g~~~-----al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~----~~~~~~~~G  134 (403)
T PRK07810         68 GNPTVSMFE----ERLRLIEGAEA-----CFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVV----CNEILPRWG  134 (403)
T ss_pred             CCchHHHHH----HHHHHHhCCCc-----EEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHH----HHHHHHHcC
Confidence            345577777    67889999874     36679999999999999999999999988666554321    111122334


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  +++.++.      .|++++++++++ ++++|++++|+||+  ..|+++|+++|+++|++|++|++|..+...     
T Consensus       135 ~--~v~~vd~------~d~~~l~~ai~~-~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~-----  200 (403)
T PRK07810        135 V--ETVFVDG------EDLSQWEEALSV-PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQ-----  200 (403)
T ss_pred             c--EEEEECC------CCHHHHHHhcCc-CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccC-----
Confidence            4  5555542      389999999987 89999999898887  779999999999999999999998766432     


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      .++. ++|++++|+||++.|..   ||+++++++     .+.+++.....  ..|.......+++  +++.+  ..+..+
T Consensus       201 ~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~-----~~~~~l~~~~~--~~g~~~s~~~a~l--~l~~L--~tl~~R  269 (403)
T PRK07810        201 RGLPLGADVVVYSGTKHIDGQGRVLGGAILGDRE-----YIDGPVQKLMR--HTGPALSAFNAWV--LLKGL--ETLALR  269 (403)
T ss_pred             ChhhcCCcEEEccCCceecCCcCceeEEEEeChH-----HHHHHHHHHHH--HhCCCCCHHHHHH--HHhcc--CcHHHH
Confidence            2333 78999999999997643   599988873     23323332111  1122112222222  23332  235678


Q ss_pred             HHHHHHHHHHHHHHHHh-cCcE
Q 009673          376 QNKVVSNCRALASRLVE-LGYK  396 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~-~G~~  396 (529)
                      .++..+|+..+.+.|++ +++.
T Consensus       270 ~~~~~~~a~~~a~~L~~~p~v~  291 (403)
T PRK07810        270 VRHSNASALRIAEFLEGHPAVR  291 (403)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcc
Confidence            88999999999999987 3443

>PRK08354 putative aminotransferase; Provisional

Probab=99.81  E-value=1.3e-17  Score=169.78  Aligned_cols=291  Identities=15%  Similarity=0.107  Sum_probs=173.5

Q ss_pred             cceeEecCCCC-CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HH
Q 009673          103 KSLELIASENF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA  180 (529)
Q Consensus       103 ~~i~L~asen~-~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A  180 (529)
                      +.|+|..++|+ .|+.+.+++...+.. . .+||.         ...+    ++++++++|.       +|.+|+|+ +|
T Consensus         9 ~~i~l~~~~np~~p~~~~~a~~~~~~~-~-~~yp~---------~~~l----~~~ia~~~~~-------~I~vt~G~~~a   66 (311)
T PRK08354          9 GLIDFSASVNPYPPEWLDEMFERAKEI-S-GRYTY---------YEWL----EEEFSKLFGE-------PIVITAGITEA   66 (311)
T ss_pred             ceeEecCCCCCCCCHHHHHHHHHHHHH-h-hcCCC---------hHHH----HHHHHHHHCC-------CEEECCCHHHH
Confidence            45888888876 477888888765432 1 23442         1233    3667777773       45678988 88


Q ss_pred             HHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 009673          181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS  260 (529)
Q Consensus       181 ~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s  260 (529)
                      +..++. ++.|||+|++++|.|.++.        ..+...|.  +++.+       .+|++.+++.++  +++++++++|
T Consensus        67 l~~~~~-~~~~gd~vlv~~P~y~~~~--------~~~~~~g~--~~~~~-------~~d~~~l~~~~~--~~~~vi~~~P  126 (311)
T PRK08354         67 LYLIGI-LALRDRKVIIPRHTYGEYE--------RVARFFAA--RIIKG-------PNDPEKLEELVE--RNSVVFFCNP  126 (311)
T ss_pred             HHHHHH-hhCCCCeEEEeCCCcHHHH--------HHHHHcCC--EEeec-------CCCHHHHHHhhc--CCCEEEEecC
Confidence            776664 4459999999999876542        12334454  44443       367889988875  4678888889


Q ss_pred             CCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccc--cCCCCeEEEeeCCCcch
Q 009673          261 AYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL--RGPRGGMIFFKKDPVLG  333 (529)
Q Consensus       261 ~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~  333 (529)
                      +||+  ..   .+++|.++|+++|+++|+|+++ .++...+....  ..--+++.|++|++  +|+|.||+++..     
T Consensus       127 ~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y-~~f~~~~~~~~--~~~vi~~~S~SK~~~l~GlRiG~~v~~~-----  198 (311)
T PRK08354        127 NNPDGKFYNFKELKPLLDAVEDRNALLILDEAF-IDFVKKPESPE--GENIIKLRTFTKSYGLPGIRVGYVKGFE-----  198 (311)
T ss_pred             CCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcc-hhccccccccC--CCcEEEEeccHhhcCCccceeeeeeehH-----
Confidence            9997  33   4677778889999999999984 45444321111  12247889999986  799999999833     


Q ss_pred             hHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEEEccC
Q 009673          334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLR  412 (529)
Q Consensus       334 ~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~  412 (529)
                       +...++.   .+...+   ..+.+++. ++..   .+++    ++.++.+.+.+..+.. +.....+  +..++++++.
T Consensus       199 -~~l~~~~---~~~~~~---~~~~~~~~-~~~~---~~~~----~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~  261 (311)
T PRK08354        199 -EAFRSVR---MPWSIG---STGYAFLE-FLIE---DDFE----HLRKTMPLIWREKERFEKALYVKS--DANFFIKDVG  261 (311)
T ss_pred             -HHHHHcC---CCccCC---HHHHHHHH-HHHH---hHHH----HHHHHHHHHHHHHHHHHHhcCCCC--CCcEEEEECC
Confidence             3323222   121111   12222222 2221   1221    2222222222222221 1111122  2344556553


Q ss_pred             CCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          413 PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       413 ~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                          +..++.+.|.++||.+..    |.... .++++||++.       ..++.+++.+.++++
T Consensus       262 ----~~~~~~~~l~~~gv~v~~----g~~f~-~~~~iRi~~~-------~~~~~~~l~~al~~~  309 (311)
T PRK08354        262 ----DAEKFVEFLKRNGILVRD----CTSFG-LPGYIRFSVR-------DREENEKLIRALREW  309 (311)
T ss_pred             ----CHHHHHHHHHHCCeEEEe----cccCC-CCCeEEEEeC-------CHHHHHHHHHHHHHh
Confidence                356677788889999954    43321 2579999964       257788888888764

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.81  E-value=5.2e-18  Score=177.85  Aligned_cols=213  Identities=20%  Similarity=0.218  Sum_probs=149.9

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..+++|    +++++++|.+.     .|.++||++|+..++.++++|||+|++.++.|++......    ..+...|
T Consensus        62 ~~p~~~~le----~~lA~l~g~~~-----~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~----~~~~~~G  128 (398)
T PRK08249         62 TNPTVQAFE----EKVRILEGAEA-----ATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFT----EFLPRMG  128 (398)
T ss_pred             CChHHHHHH----HHHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHH----HHHhhCC
Confidence            456667777    67889999865     3667999999999999999999999999998865421110    0112234


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  ++..++      ..|++++++++++ ++|+|+++.|+||+  ..|+++|.++|+++|+++++|++|..+..     .
T Consensus       129 i--~v~~vd------~~d~e~l~~~i~~-~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~-----~  194 (398)
T PRK08249        129 V--DVTLCE------TGDHEQIEAEIAK-GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPIN-----Q  194 (398)
T ss_pred             e--EEEEcC------CCCHHHHHHhcCC-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCcccc-----C
Confidence            3  544433      3689999999987 89999999898887  78999999999999999999999765432     1


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      .++. ++|++++|+||++.|+.   ||++++++      ++.+++.....  ..|.......+.+  +++.+  ..+..+
T Consensus       195 ~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~------~l~~~l~~~~~--~~g~~~s~~~a~l--~l~~l--~tL~~R  262 (398)
T PRK08249        195 NPLALGADLVIHSATKFLSGHADALGGVVCGSK------ELMEQVYHYRE--INGATMDPMSAYL--ILRGM--KTLKLR  262 (398)
T ss_pred             CchhhCCCEEeccCceecCCCCCceEEEEECCH------HHHHHHHHHHH--hcCCCCCHHHHHH--HHhCc--chHHHH
Confidence            2333 78999999999997653   48888765      66665543221  1122111122222  22222  234567


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q 009673          376 QNKVVSNCRALASRLVEL  393 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~~  393 (529)
                      +++..+|++.+.+.|++.
T Consensus       263 ~~~~~~na~~la~~L~~~  280 (398)
T PRK08249        263 VRQQQESAMALAKYLQTH  280 (398)
T ss_pred             HHHHHHHHHHHHHHHHcC
Confidence            788899999999999873

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.81  E-value=1.4e-17  Score=176.01  Aligned_cols=316  Identities=18%  Similarity=0.207  Sum_probs=194.1

Q ss_pred             CCCCCcHHHHHHHhhhhhccCCC-CCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh
Q 009673          110 SENFTSRAVMEAVGSCLTNKYSE-GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI  188 (529)
Q Consensus       110 sen~~~~~V~eal~~~l~~~y~~-G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al  188 (529)
                      +-.++|+.|++++...+.+ |.. .|.-.....| ...+.+|    +.+++++|.+..     +.++||+.|+..++.+ 
T Consensus        89 g~s~l~~~vieAv~~~~~~-y~~l~~~l~~g~~g-~r~~~le----~~lA~l~gae~a-----lvv~sg~aAi~l~l~~-  156 (454)
T TIGR00474        89 GRAPLAEEAIEAVTDAARG-YSNLEYDLETGKRG-SRYSHVE----GLLCELTGAEDA-----LVVNNNAAAVLLALNT-  156 (454)
T ss_pred             CCCCCCHHHHHHHHHHHhc-ccchhccccccccc-hHHHHHH----HHHHHHhCCCcE-----EEECCHHHHHHHHHHH-
Confidence            3446799999999877753 321 1100000112 2234444    788999999863     3458899999888754 


Q ss_pred             cCCCCEEEEcCCCC---CccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-
Q 009673          189 LKPHDRIMGLDLPH---GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-  264 (529)
Q Consensus       189 l~pGD~Vl~~~~~~---~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-  264 (529)
                      +.+||+|++.+.+|   |+.+...     ..+...|.  +++.++.+   ...|++++++++++ +|++|++.+++|++ 
T Consensus       157 l~~GdeVIvs~~e~v~~ggs~~i~-----~~~~~~G~--~~~~v~~~---~~~~l~dle~aI~~-~T~lv~~~h~sN~~~  225 (454)
T TIGR00474       157 LAKGKEVIVSRGELVEIGGSFRIP-----DVMEQSGA--KLVEVGTT---NRTHLKDYEDAITE-NTALLLKVHTSNYRI  225 (454)
T ss_pred             hCCcCEEEECCChhhhhcchhhHH-----HHHHHcCC--EEEEeCCC---CCCCHHHHHHhcCc-CCEEEEEEccCcccc
Confidence            68999999988653   3322210     11233454  56665543   34689999999987 89998877655542 


Q ss_pred             -----CCCHHHHHHHHHHhCCEEEEecccccccccc----cc--cC---CCCC-cccEEEecccccccCCCCeEEEeeCC
Q 009673          265 -----DFDYPRMRQIADAVGALLMMDMAHISGLVAA----SV--VA---DPFK-YCDVVTTTTHKSLRGPRGGMIFFKKD  329 (529)
Q Consensus       265 -----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~----~~--~~---~~~~-~aDiv~~S~hK~l~GprgG~i~~~~~  329 (529)
                           ..|+++|+++|++||+++++|.+  +|.+..    +.  .+   .+.. ++|++++|.||+|.||.+|++++++ 
T Consensus       226 ~G~~~~~dl~~I~~la~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~~-  302 (454)
T TIGR00474       226 VGFTEEVSIAELVALGREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGKK-  302 (454)
T ss_pred             cCCCCCCCHHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEECH-
Confidence                 57999999999999999999974  454311    11  11   1222 7999999999999999999999987 


Q ss_pred             CcchhHHHhhhcccccCC-CCCCChHHHHHHHHHHHHHhcCch--H---------HHHHHHHHHHHHHHHHHHHh---cC
Q 009673          330 PVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPE--F---------KVYQNKVVSNCRALASRLVE---LG  394 (529)
Q Consensus       330 ~~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~--~---------~~~~~~i~~~a~~l~~~L~~---~G  394 (529)
                           ++.+++......- +.  ..-..++++...+.....+.  +         ....++..+++..+.+.|.+   .|
T Consensus       303 -----~~i~~l~~~~l~r~lr--~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~  375 (454)
T TIGR00474       303 -----ELIERLKKNPLTRALR--VDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPG  375 (454)
T ss_pred             -----HHHHhhhhchhHHHHh--hChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCC
Confidence                 5655544321100 00  00113344444554433221  0         12234777889999999977   33


Q ss_pred             c--EEec------CCCC--C--ceEEEccCCCCCcHHHHHHhHhcCC--eEEcCCCCCCCCCCCCCCeEEEccCCCccCC
Q 009673          395 Y--KLVS------GGSD--N--HLVLVDLRPMGIDGARVEKILDMAS--ITLNKNSVPGDKSALVPGGIRIGSPAMTTRG  460 (529)
Q Consensus       395 ~--~v~~------~gt~--~--~~~~v~~~~~~i~~~~~~~~L~~~G--I~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g  460 (529)
                      +  .+..      +|+-  .  .-.-+.+.+.+.+..++++.|++..  |....          ..+.+.+-.     |.
T Consensus       376 ~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~~~~~~l~~~lr~~~~~ii~r~----------~~~~~~ld~-----r~  440 (454)
T TIGR00474       376 FELEIVPGLSQVGGGSLPDERLPSYAVTLTPDGLSAEKLEARLRELPPPIIGRI----------EDDRFLLDL-----RT  440 (454)
T ss_pred             ceEEEEEcCCcccCCCCcCCCCCeEEEEEecCCCCHHHHHHHHhcCCCCEEEEE----------ECCEEEEEe-----Cc
Confidence            3  3332      2221  1  1123345555667888999998766  44321          134454432     45


Q ss_pred             CCHHHHHHHHHHH
Q 009673          461 FSEKEFVAIADFI  473 (529)
Q Consensus       461 ~~~~d~~~la~~i  473 (529)
                      +.++|++.+++.|
T Consensus       441 ~~~~~~~~~~~~~  453 (454)
T TIGR00474       441 LLEDEEELLIEAL  453 (454)
T ss_pred             CCHHHHHHHHHHh
Confidence            7789999998876

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.81  E-value=6.1e-18  Score=177.15  Aligned_cols=213  Identities=20%  Similarity=0.183  Sum_probs=150.5

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..+++|    +++++++|.+.     .+.++||+.|+.+++. ++++||+|+++++.|++.+....    ..+...|
T Consensus        52 ~~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~----~~~~~~G  117 (390)
T PRK08064         52 GNPTREALE----DIIAELEGGTK-----GFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMIT----EVLSRFG  117 (390)
T ss_pred             CChhHHHHH----HHHHHHhCCCC-----eEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHH----HHHHHcC
Confidence            455667777    77889999874     3556999998887776 78999999999998876542111    1122234


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  +++.+++      .|++++++.+++ ++++|++++|+||+  ..|+++|.++|+++|+++++|+++..+..     .
T Consensus       118 ~--~v~~v~~------~d~~~l~~~l~~-~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~-----~  183 (390)
T PRK08064        118 I--EHTFVDM------TNLEEVAQNIKP-NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLL-----Q  183 (390)
T ss_pred             C--EEEEECC------CCHHHHHHhcCC-CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccc-----c
Confidence            4  5555443      278999999987 89999999999887  78999999999999999999999765432     2


Q ss_pred             CCCC-cccEEEecccccccCCCC---eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPRG---GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gprg---G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      .+++ ++|+++.|+||++.|+.+   |+++++++     ++.++++....+.  |......-+.+  +++.+  ..+..+
T Consensus       184 ~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~-----~~~~~l~~~~~~~--g~~~~~~~a~l--~~~gl--~tl~~R  252 (390)
T PRK08064        184 KPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDE-----ELAQKLYFLQNSF--GAVLGVQDCWL--VLRGL--KTLHVR  252 (390)
T ss_pred             CchhhCCcEEEeecceeccCCccceeEEEEeCCH-----HHHHHHHHHHHhc--CCCCCHHHHHH--HHccc--CcHHHH
Confidence            2333 689999999999988764   88887653     6666665443321  22111111221  22222  224577


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q 009673          376 QNKVVSNCRALASRLVEL  393 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~~  393 (529)
                      .++..+|+..+.+.|++.
T Consensus       253 ~~~~~~~a~~la~~L~~~  270 (390)
T PRK08064        253 LEHSSETANKIALYLQEH  270 (390)
T ss_pred             HHHHHHHHHHHHHHHhcC
Confidence            888899999999999884

>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]

Probab=99.80  E-value=3.7e-18  Score=162.64  Aligned_cols=326  Identities=21%  Similarity=0.236  Sum_probs=219.0

Q ss_pred             eeEecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCCchhH-HHHHHHHHHHHHHHcCCCCCCCceeeecCChHH
Q 009673          105 LELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYI-DELETLCQKRALAAFNLDENKWGVNVQPLSGSP  179 (529)
Q Consensus       105 i~L~asen~~----~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~-d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~  179 (529)
                      |.+.-.+||+    .|+|.+|-...+ ..|..|..+.|+..|.+.+ ..+|    ..++++.+.+.     .+...++-.
T Consensus        69 ilnFcaNnYLGLsshPeii~a~~~al-eeyGaGlssvrfIcGtq~iHk~LE----~kiAqfh~rED-----~ilypscfd  138 (417)
T KOG1359|consen   69 ILNFCANNYLGLSSHPEIINAGQKAL-EEYGAGLSSVRFICGTQDIHKLLE----SKIAQFHGRED-----TILYPSCFD  138 (417)
T ss_pred             eeeecccccccccCChHHHHHHHHHH-HHhCCCccceeEEecchHHHHHHH----HHHHHHhCCCc-----eEEeccccc
Confidence            4444556664    689999988766 5688888889998887644 4566    66788888775     355678889


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhh---hcCCcEEE
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAI---LFRPKLII  256 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~---~~~pklIi  256 (529)
                      ||..++-++++|.|-|+...+.|.+.+ +|       +++..            .-..+|+-+++..+.   +.|-|+|+
T Consensus       139 ANag~feail~pedAvfSDeLNhASII-dG-------irLck------------ry~h~dv~~l~~~l~~a~k~r~klv~  198 (417)
T KOG1359|consen  139 ANAGAFEAILTPEDAVFSDELNHASII-DG-------IRLCK------------RYRHVDVFDLEHCLISACKMRLKLVV  198 (417)
T ss_pred             cchHHHHHhcChhhhhhccccccchhh-hh-------hHHHh------------hhccchhHHHHHHHHHhhhheEEEEE
Confidence            999999999999999998888775543 22       22221            113455555554332   23667776


Q ss_pred             Ec--CCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccc---cc--cCCCCCcccEEEecccccccCCCCeEEEeeCC
Q 009673          257 AG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SV--VADPFKYCDVVTTTTHKSLRGPRGGMIFFKKD  329 (529)
Q Consensus       257 ~~--~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~---~~--~~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~  329 (529)
                      ..  .|..+...|+++|.+++++||++|++|++|..|....   |.  ........|++.+++.|.+.|-.|||+.+++ 
T Consensus       199 TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp~-  277 (417)
T KOG1359|consen  199 TDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGPK-  277 (417)
T ss_pred             ecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCCCCccCCh-
Confidence            65  4555668899999999999999999999999887643   11  1122235789999999999999999999998 


Q ss_pred             CcchhHHHhhhcccccCCCCCCChHHHHHHHH-HHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce-E
Q 009673          330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLA-VCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL-V  407 (529)
Q Consensus       330 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala-~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~-~  407 (529)
                           .+.+.++...-|++.++...+.+.+.+ .++..++..  .....+...+.+++++.+...||.+...   +|. .
T Consensus       278 -----~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s--~~~i~~~~a~~qrfr~~me~aGftIsg~---~hPI~  347 (417)
T KOG1359|consen  278 -----PLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVS--SKEIQSRQANTQRFREFMEAAGFTISGA---SHPIC  347 (417)
T ss_pred             -----hHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHhcCceecCC---CCCcc
Confidence                 677777665556654443332222222 233333221  3445667778888999988899998652   342 2


Q ss_pred             EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .+-+..... ...+.+.|.+.||.|-.-+.|-  .|-++..||+-..+.    ++++|++++.+++.++.+
T Consensus       348 pv~lGda~l-A~~~ad~lLk~Gi~Vigfs~Pv--VP~gkariRVqiSAa----Ht~edid~~i~Af~~vgr  411 (417)
T KOG1359|consen  348 PVMLGDARL-ASKMADELLKRGIYVIGFSYPV--VPKGKARIRVQISAA----HTEEDIDRLIEAFSEVGR  411 (417)
T ss_pred             ceecccHHH-HHHHHHHHHhcCceEEeecCCc--CCCCceEEEEEEehh----cCHHHHHHHHHHHHHHHH
Confidence            222222111 2345566667899985433332  233456789877665    459999999999988765

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.80  E-value=4.3e-18  Score=176.38  Aligned_cols=228  Identities=16%  Similarity=0.205  Sum_probs=153.0

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..+++|    +.++++.|.+.     -+..+||++|+.+++ .+++|||+|+++.+.+++.... +.    .....+
T Consensus        52 ~~p~~~~le----~~lA~leg~~~-----~v~~~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~-~~----~~~~~~  116 (364)
T PRK07269         52 KNPTRAKLE----ETLAAIESADY-----ALATSSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRW-FN----QQEKEG  116 (364)
T ss_pred             CCccHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHH-HH----HHHhcC
Confidence            345677888    67788888764     255678889999888 4679999999998877654311 00    000000


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                       .+.     +   ++..|++++++.+++ ++|+|++++|+||+  ..|+++|+++|+++|+++++|++++.++.     .
T Consensus       117 -~~~-----~---~~~~d~~~l~~~i~~-~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~-----~  181 (364)
T PRK07269        117 -RFH-----F---TYANTEEELIAAIEE-DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIY-----Q  181 (364)
T ss_pred             -cEE-----E---EecCCHHHHHHhcCc-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence             011     1   234689999999987 89999999999987  67999999999999999999999665432     2


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      .|++ ++|++++|+||++.|+.   ||+|+++++     ++.+++.....  ..|......-++  .++..+  ..+..+
T Consensus       182 ~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~-----~l~~~~~~~~~--~~G~~~s~~~a~--l~~~~L--~tL~~r  250 (364)
T PRK07269        182 RPIELGADIVLHSATKYLSGHNDVLAGVVVTNDL-----ELYEKLFYNLN--TTGAVLSPFDSY--LLMRGL--KTLSLR  250 (364)
T ss_pred             CchhhCCcEEEecCceeccCCCcccceEEEeCcH-----HHHHHHHHHHH--HhCCCCCHHHHH--HHHcCC--CcHHHH
Confidence            4555 79999999999998755   699888764     56665543211  112211111222  223333  235778


Q ss_pred             HHHHHHHHHHHHHHHHhc-Cc-EEecCCCCCceEEEcc
Q 009673          376 QNKVVSNCRALASRLVEL-GY-KLVSGGSDNHLVLVDL  411 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~~-G~-~v~~~gt~~~~~~v~~  411 (529)
                      +++..+|+..+.+.|++. ++ .+..++. ..++.+.+
T Consensus       251 ~~~~~~na~~~a~~L~~~p~v~~v~ypg~-gg~~sf~~  287 (364)
T PRK07269        251 MERSTANAQEVVAFLKKSPAVKEVLYTGK-GGMISFKV  287 (364)
T ss_pred             HHHHHHHHHHHHHHHHhCCCccEEeCCCc-CcEEEEEE
Confidence            889999999999999874 44 3443432 23444444

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.80  E-value=8.3e-18  Score=176.20  Aligned_cols=291  Identities=17%  Similarity=0.114  Sum_probs=188.1

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..+++|    +++++++|.+.     .+...||++|+..++.++++|||+|+++++.|++......    ......|
T Consensus        63 ~~pt~~~Le----~~lA~l~g~~~-----~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~----~~~~~~G  129 (394)
T PRK07050         63 ATPTSLALA----QRLAEIEGGRH-----ALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGE----WLARDFG  129 (394)
T ss_pred             CCHHHHHHH----HHHHHHhCCCe-----EEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHH----HHHHhcC
Confidence            566677777    67888999764     2445777899999999999999999999998875432110    0112234


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  ++..++..      |.+++++.+++ ++|+|++++|+||+  ..|+++|+++|+++|+++++|++|..+...     
T Consensus       130 i--~v~~vd~~------~~~~l~~~i~~-~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~-----  195 (394)
T PRK07050        130 I--TVRFYDPL------IGAGIADLIQP-NTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAF-----  195 (394)
T ss_pred             e--EEEEECCC------CHHHHHHhcCC-CCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccccccc-----
Confidence            3  55554421      45788888887 89999999998886  679999999999999999999998776542     


Q ss_pred             CCCC-cccEEEecccccccCC---CCeEEEeeCCCcchhHHHhhhccccc-CCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKV  374 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~  374 (529)
                      .|+. ++|+++.|++|++.|.   .||+++++++     ++.+++..... .|.  +..  ...+ ..+++.+  ..+..
T Consensus       196 ~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~-----~~~~~~~~~~~~~G~--~~~--~~~a-~l~lr~l--~tl~~  263 (394)
T PRK07050        196 KPFEHGVDISVQALTKYQSGGSDVLMGATITADA-----ELHAKLKLARMRLGI--GVS--ADDC-SLVLRGL--PSLQV  263 (394)
T ss_pred             CHHHcCCeEEEEECCceecCCCCeeEEEEEECCH-----HHHHHHHHHHHhcCC--CCC--HHHH-HHHHcCC--CcHHH
Confidence            3333 6899999999999654   3788887664     67666653322 121  111  1111 1233322  24566


Q ss_pred             HHHHHHHHHHHHHHHHHhc-CcE-EecCC---------------CCCceEEEccCCCCC---cHHHHHHhHhcCCeEEcC
Q 009673          375 YQNKVVSNCRALASRLVEL-GYK-LVSGG---------------SDNHLVLVDLRPMGI---DGARVEKILDMASITLNK  434 (529)
Q Consensus       375 ~~~~i~~~a~~l~~~L~~~-G~~-v~~~g---------------t~~~~~~v~~~~~~i---~~~~~~~~L~~~GI~v~~  434 (529)
                      ++++..+|+..+.+.|.+. ++. +..++               ...+++.+.+.. +.   +...+.+.|+..++.++.
T Consensus       264 Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~-~~~~~~~~~~~~~l~~~~~~~s~  342 (394)
T PRK07050        264 RLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDE-RYSPAQVDAFVEALELFAIGWSW  342 (394)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC-CCCHHHHHHHHHcCCCCeecccc
Confidence            7888999999999999873 443 22111               112344444532 22   234456666667776654


Q ss_pred             CC-----CCCCC---C----CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          435 NS-----VPGDK---S----ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       435 ~~-----~Pg~~---~----~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      +.     .|...   .    ....+-|||++.        -||.+.+.+-|.+++...
T Consensus       343 G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svG--------lE~~~dl~~dl~~al~~~  392 (394)
T PRK07050        343 GGACSLAMPYDVASMRTAKWPHRGTLVRLYIG--------LEDEADLIADLEQALEAA  392 (394)
T ss_pred             CCccceEeeCcccccchhhcCCCCCEEEEEeC--------cCCHHHHHHHHHHHHHHh
Confidence            32     12210   0    112256999864        367888888887777643

>PLN02452 phosphoserine transaminase

Probab=99.80  E-value=2.9e-17  Score=169.56  Aligned_cols=334  Identities=15%  Similarity=0.135  Sum_probs=214.4

Q ss_pred             cceeEecCCCCCcHHHHHHHhhhhhccCCCCC--CCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHH
Q 009673          103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGL--PGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA  180 (529)
Q Consensus       103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~--p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A  180 (529)
                      ..+++++++..+|+.|++++...+.+--..|.  .. -...+.++.+.++ .+++.++++++++.+ +.+.+...+||.+
T Consensus         7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~-~sHRs~~f~~i~~-~~~~~L~~l~~~p~~-y~v~~l~Gsgt~~   83 (365)
T PLN02452          7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVME-MSHRGKEFLSIIQ-KAEADLRELLDIPDN-YEVLFLQGGASTQ   83 (365)
T ss_pred             ceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccc-cCCCchHHHHHHH-HHHHHHHHHhCCCCC-ceEEEEeCccHHH
Confidence            35789999999999999999988654322222  11 1122345555444 567999999998543 4455556778899


Q ss_pred             HHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 009673          181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS  260 (529)
Q Consensus       181 ~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s  260 (529)
                      +.+++..++.+||++++..-   |.++..+.   +.+...|........+-......+|+++++.  .+ +.+.|.+++.
T Consensus        84 ~ea~~~nl~~~~~~~l~~~~---G~fg~r~~---~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~v~~~hn  154 (365)
T PLN02452         84 FAAIPLNLCKPGDKADFVVT---GSWSKKAA---KEAKKYCKTNVIASGKDEKYTKIPSVSEWEL--TP-DAKFVHICAN  154 (365)
T ss_pred             HHHHHHhcCCCCCeEEEEEC---CHHHHHHH---HHHHHhCCCcEEEecCCCCCCCCCChHHcCC--CC-CCcEEEECCC
Confidence            99999999999999998863   33332221   1112233211111111011112567776521  22 4677777654


Q ss_pred             CCC--C-CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHH
Q 009673          261 AYP--R-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL  336 (529)
Q Consensus       261 ~~p--~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l  336 (529)
                      ..+  . ..|++++.      ++++++|+++.+|....+     +...++..+|.||+| ||.| |++++++      ++
T Consensus       155 ETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~pid-----v~~~~v~~~saqK~l-GP~Gl~~v~vr~------~~  216 (365)
T PLN02452        155 ETIHGVEFKDYPDVG------NVPLVADMSSNFLSKPVD-----VSKYGVIYAGAQKNV-GPSGVTIVIIRK------DL  216 (365)
T ss_pred             CCCCcEecCcccccC------CCeEEEECCccccCcccC-----HHHcCEEEEeccccc-CCCCeEEEEEcH------HH
Confidence            433  3 35666553      389999999887765333     222345557999998 7998 9999988      44


Q ss_pred             Hhhhcccc---c--------CCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHh-cCcEEe-cC-C
Q 009673          337 ESAINNAV---F--------PGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVE-LGYKLV-SG-G  401 (529)
Q Consensus       337 ~~~i~~~~---~--------p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~-~G~~v~-~~-g  401 (529)
                      .+++....   +        ....+||+.+.+.++..+|+.+... +++.+.++..++++.+.+.|.+ .|+... .+ .
T Consensus       217 l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~  296 (365)
T PLN02452        217 IGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKS  296 (365)
T ss_pred             HhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChH
Confidence            43332110   0        0123699999999999999988765 6899999999999999999988 577211 11 1


Q ss_pred             CCCc-eEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          402 SDNH-LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       402 t~~~-~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ..+. .+.+.+.... ..+++.+.++++|+..    ++|+.+   -+++|+|+-  .  .++.++++.+++++++.-+
T Consensus       297 ~rs~~~vsF~~~~~~-~~~~f~~~~~~~g~~~----~~G~r~---~gg~R~s~y--n--a~~~~~v~~L~~~m~~f~~  362 (365)
T PLN02452        297 VRSLMNVPFTLGGSE-LEAEFVKEAAKAGMVQ----LKGHRS---VGGMRASIY--N--AMPLAGVEKLVAFMKDFQA  362 (365)
T ss_pred             HhCCeEEEEEcCCch-hHHHHHHHHHHCCCcc----cCCccc---cCceEEECc--C--CCCHHHHHHHHHHHHHHHH
Confidence            1122 2233333322 3466888899999998    677753   346999863  2  3678999999999987654

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.80  E-value=6.4e-17  Score=180.94  Aligned_cols=308  Identities=20%  Similarity=0.213  Sum_probs=200.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC--------CCCEEEEcCCCCCcccccccccccccccc
Q 009673          148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--------PHDRIMGLDLPHGGHLSHGFMTPKRRVSG  219 (529)
Q Consensus       148 ~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--------pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~  219 (529)
                      +++...++|+++++|.+.    +.+++.+|+.|+++.++++-.        ..++|++++-.|+.+..        ....
T Consensus       530 q~i~elq~~l~eltGmd~----~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPa--------sa~~  597 (939)
T TIGR00461       530 ELIAQLEKWLCSITGFDA----ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPA--------SAAM  597 (939)
T ss_pred             HHHHHHHHHHHHHHCCCC----cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHH--------HHHH
Confidence            334445699999999995    578889999888876666532        33578888877765532        1234


Q ss_pred             ccceEEEEEcccCCCCCCCCHHHHHHHhhh--cCCcEEEEcCCCCCC-CCC-HHHHHHHHHHhCCEEEEecccccccccc
Q 009673          220 TSIYFESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASAYPR-DFD-YPRMRQIADAVGALLMMDMAHISGLVAA  295 (529)
Q Consensus       220 ~g~~~~~v~~~v~~~~~~iD~d~le~~i~~--~~pklIi~~~s~~p~-~~d-~~~i~~ia~~~g~~livD~ah~~Gli~~  295 (529)
                      .|.  +++.++.+ +++.+|+++|++++++  .++++|++.++++.+ ..| +++|+++|+++|.++++|+||..++...
T Consensus       598 ~G~--~Vv~V~~d-~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l  674 (939)
T TIGR00461       598 AGM--QVVPVNCD-QDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGL  674 (939)
T ss_pred             CCC--EEEEeccC-CCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCceecccHHHHHHHHHHcCCEEEEEecChhhCCCC
Confidence            454  77777776 5789999999999985  378888888766544 444 9999999999999999999986654422


Q ss_pred             cccCCCCC-cccEEEeccccccc-----CCCC-eEEEeeCCCc---chhHHHhhhcc---cc-cCCCCCCChHHH-H-HH
Q 009673          296 SVVADPFK-YCDVVTTTTHKSLR-----GPRG-GMIFFKKDPV---LGVELESAINN---AV-FPGLQGGPHNHT-I-GG  359 (529)
Q Consensus       296 ~~~~~~~~-~aDiv~~S~hK~l~-----Gprg-G~i~~~~~~~---~~~~l~~~i~~---~~-~p~~~g~p~~~~-i-aa  359 (529)
                         ..|-+ ++|++++|.||+|.     |++| |++.+++...   ....+.+..+.   -. .......+..+. + ..
T Consensus       675 ---~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~  751 (939)
T TIGR00461       675 ---TSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPI  751 (939)
T ss_pred             ---CCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHH
Confidence               12322 79999999999986     5555 8999987320   00001000000   00 000000011111 1 12


Q ss_pred             HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC---CCceEEEccCC----CCCcHHHHHHhHhcCCeEE
Q 009673          360 LAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS---DNHLVLVDLRP----MGIDGARVEKILDMASITL  432 (529)
Q Consensus       360 la~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt---~~~~~~v~~~~----~~i~~~~~~~~L~~~GI~v  432 (529)
                      .++.+..+..+++++..++...|++++.++|.+ +++++.++.   ..|-+++++++    .+++..++.+.|.+.|+..
T Consensus       752 a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~ha  830 (939)
T TIGR00461       752 SWMYIKMMGNEGLPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHA  830 (939)
T ss_pred             HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeec
Confidence            223455566677888899999999999999987 677766432   23556777764    2466788999999999985


Q ss_pred             cCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 009673          433 NKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAK  484 (529)
Q Consensus       433 ~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~~~  484 (529)
                      ...+.|      ..+.+=|....    .-+.+|++++++++..+.....++.
T Consensus       831 pt~~~p------v~g~lmiepTE----~eskeelD~f~~al~~I~~e~~~~~  872 (939)
T TIGR00461       831 PTLSFP------VPGTLMVEPTE----SESLEELDRFCDAMIAIKEEINALV  872 (939)
T ss_pred             cccCCc------cCCeEEEEeec----cCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            332222      22333232222    2458999999999988877665543

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PLN02880 tyrosine decarboxylase

Probab=99.80  E-value=2.3e-17  Score=176.93  Aligned_cols=313  Identities=14%  Similarity=0.106  Sum_probs=193.7

Q ss_pred             hhHHHHHHHHHHHHHHHcCCCCCCC----ceeeecCChHHHHHHHHHhhcC----------CCC-EEEEcCCCCCccccc
Q 009673          144 EYIDELETLCQKRALAAFNLDENKW----GVNVQPLSGSPANFEVYTAILK----------PHD-RIMGLDLPHGGHLSH  208 (529)
Q Consensus       144 ~~~d~lE~~a~~~la~~~g~~~~~~----~~~V~~~sGs~A~~~~l~all~----------pGD-~Vl~~~~~~~g~~s~  208 (529)
                      +...++|+.+.+|+++++|.+...+    +.-+..++||+||+.++.+..+          ... .|++.+-   +|++.
T Consensus       118 p~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~---aH~Sv  194 (490)
T PLN02880        118 PAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQ---THSAL  194 (490)
T ss_pred             cccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCC---chHHH
Confidence            3466899999999999999986422    1123345667999887765321          112 2333332   34432


Q ss_pred             cccccccccccccceE-EEEEcccCC-CCCCCCHHHHHHHhhhc-----CCcEEEEc--CCCCCCCCCHHHHHHHHHHhC
Q 009673          209 GFMTPKRRVSGTSIYF-ESMPYRLDE-STGLVDYDMLEKTAILF-----RPKLIIAG--ASAYPRDFDYPRMRQIADAVG  279 (529)
Q Consensus       209 g~~~~~~~i~~~g~~~-~~v~~~v~~-~~~~iD~d~le~~i~~~-----~pklIi~~--~s~~p~~~d~~~i~~ia~~~g  279 (529)
                      .     |.+...|.+. .++.+++|. +++.+|+++|++.|.+.     .|-+|+.+  .++.+...|+++|+++|++||
T Consensus       195 ~-----Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~  269 (490)
T PLN02880        195 Q-----KACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNG  269 (490)
T ss_pred             H-----HHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcC
Confidence            2     3556666542 234455653 35799999999999753     25566654  344445889999999999999


Q ss_pred             CEEEEecccccccccccccC---CCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh-------cccc----
Q 009673          280 ALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI-------NNAV----  344 (529)
Q Consensus       280 ~~livD~ah~~Gli~~~~~~---~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i-------~~~~----  344 (529)
                      +|++||+||+.+......+.   ..++.+|.++.++|||+..|.+ |++++++..    .+...+       ....    
T Consensus       270 iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~----~l~~~~~~~~~Yl~~~~~~~~  345 (490)
T PLN02880        270 MWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRN----ALIQSLSTNPEFLKNKASQAN  345 (490)
T ss_pred             CEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHH----HHHHHHccCHHHhcCcccccc
Confidence            99999999776644322211   1234689999999999999998 999988631    111111       1000    


Q ss_pred             ----cC--CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceEEEccCCCCCc
Q 009673          345 ----FP--GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRPMGID  417 (529)
Q Consensus       345 ----~p--~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~~v~~~~~~i~  417 (529)
                          +.  ..+.+.... ...++..++....+++.++.++..+.++++.+.|++ .+++++.+. +..++.+.+.+.+.+
T Consensus       346 ~~~~~~~~~i~~~rr~~-alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~-~~~iv~Fr~~~~~~~  423 (490)
T PLN02880        346 SVVDYKDWQIPLGRRFR-SLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPR-IFSLVCFRLVPPKNN  423 (490)
T ss_pred             CCCChhccCcCCCCccc-HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC-ceEEEEEEEeCCCCC
Confidence                00  011111111 224445666666667788888888999999999977 689988753 233444444433222


Q ss_pred             H-------HHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          418 G-------ARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       418 ~-------~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      .       ..+.+.| ++..+.+....+.      +..++|+++....   .+++|++.+.+.|.++...
T Consensus       424 ~~~~~~~n~~l~~~l~~~g~~~v~~t~~~------g~~~lR~~~~n~~---tt~~di~~~~~~i~~~~~~  484 (490)
T PLN02880        424 EDNGNKLNHDLLDAVNSSGKIFISHTVLS------GKYVLRFAVGAPL---TEERHVTAAWKVLQDEASK  484 (490)
T ss_pred             hhhHHHHHHHHHHHHHhCCCEEEEEEEEC------CEEEEEEEecCCC---CCHHHHHHHHHHHHHHHHH
Confidence            1       2243444 3455666543332      2458999864333   4589999999999887653

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.80  E-value=9.5e-18  Score=175.21  Aligned_cols=212  Identities=21%  Similarity=0.251  Sum_probs=147.7

Q ss_pred             chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673          143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI  222 (529)
Q Consensus       143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~  222 (529)
                      ++..+++|    +.+++++|.+.    + +...||++|+.+++.++++|||+|++.++.|++.+...    ...+...|.
T Consensus        53 ~p~~~~le----~~la~l~g~~~----~-~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~----~~~~~~~g~  119 (380)
T TIGR01325        53 NPTVAAFE----ERIAALEGAER----A-VATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFI----SEILPRFGI  119 (380)
T ss_pred             CchHHHHH----HHHHHHhCCCc----E-EEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHH----HHHHHHhCC
Confidence            45566777    67888999864    2 45689999999999999999999999887776543211    011222343


Q ss_pred             eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673          223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD  300 (529)
Q Consensus       223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~  300 (529)
                        ++..++.      .|++++++.+++ ++++|++..++||+  ..|+++|.++|+++|+++++|+++..+..     ..
T Consensus       120 --~v~~v~~------~d~~~l~~~i~~-~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~-----~~  185 (380)
T TIGR01325       120 --EVSFVDP------TDLNAWEAAVKP-NTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVL-----QQ  185 (380)
T ss_pred             --EEEEECC------CCHHHHHHhcCC-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-----CC
Confidence              5555443      278999998877 89999999888876  77999999999999999999999765432     23


Q ss_pred             CCC-cccEEEecccccccCC--C-CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHH
Q 009673          301 PFK-YCDVVTTTTHKSLRGP--R-GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ  376 (529)
Q Consensus       301 ~~~-~aDiv~~S~hK~l~Gp--r-gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~  376 (529)
                      |++ ++|++++|+||++.|+  + ||++++++      ++.+.+......  .|+... ...+ +.+++.+  ..+..+.
T Consensus       186 pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~------~~~~~l~~~~~~--~g~~~~-p~~a-~~~l~~l--~tl~~r~  253 (380)
T TIGR01325       186 PLKLGADVVVYSATKHIDGQGRVMGGVIAGSE------ELMAEVAVYLRH--TGPAMS-PFNA-WVLLKGL--ETLSLRM  253 (380)
T ss_pred             chhhCCCEEEeeccceecCCCCeEEEEEEeCH------HHHHHHHHHHHh--hCCCCC-HHHH-HHHHhcc--CcHHHHH
Confidence            444 6899999999999775  2 48888877      555555432211  121111 1111 1233322  2345678


Q ss_pred             HHHHHHHHHHHHHHHhc
Q 009673          377 NKVVSNCRALASRLVEL  393 (529)
Q Consensus       377 ~~i~~~a~~l~~~L~~~  393 (529)
                      ++..++++.+.+.|++.
T Consensus       254 ~~~~~~a~~la~~L~~~  270 (380)
T TIGR01325       254 QKQFDSALAIAEWLQAQ  270 (380)
T ss_pred             HHHHHHHHHHHHHHHcC
Confidence            88999999999999884

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=99.79  E-value=4.4e-17  Score=175.20  Aligned_cols=307  Identities=18%  Similarity=0.166  Sum_probs=191.2

Q ss_pred             hhHHHHHHHHHHHHHHHcCCCC------------CCCceeeecCChHHHHHHHHHhh----cC-----------------
Q 009673          144 EYIDELETLCQKRALAAFNLDE------------NKWGVNVQPLSGSPANFEVYTAI----LK-----------------  190 (529)
Q Consensus       144 ~~~d~lE~~a~~~la~~~g~~~------------~~~~~~V~~~sGs~A~~~~l~al----l~-----------------  190 (529)
                      +...++|+.+.+|++++++..+            ..++  +..++||+||+.++.+-    ++                 
T Consensus       125 pa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G--~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~  202 (522)
T TIGR03799       125 KAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLG--AFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAAL  202 (522)
T ss_pred             cchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCe--EEcCchHHHHHHHHHHHHHHhccccccccccccccchhhh
Confidence            4467899999999999985321            1222  33466779999877653    21                 


Q ss_pred             -----CCCEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEEEEc---
Q 009673          191 -----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAG---  258 (529)
Q Consensus       191 -----pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~~~~iD~d~le~~i~~---~~pklIi~~---  258 (529)
                           +++.|++.+.+|.+.   .     +.....|.+ .+++.+++| +++.+|+++|++.+++   .+++.+++.   
T Consensus       203 ~~~~~~~~~v~~S~~~H~S~---~-----kaa~~lglg~~~v~~vp~d-~~g~~d~~~L~~~i~~~~~~g~~~~~vvata  273 (522)
T TIGR03799       203 KHYGYDGLAILVSERGHYSL---G-----KAADVLGIGRDNLIAIKTD-ANNRIDVDALRDKCAELAEQNIKPLAIVGVA  273 (522)
T ss_pred             hhccCCceEEEECCCchHHH---H-----HHHHHcCCCcccEEEEEeC-CCCcCCHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence                 134566666555432   1     233344432 145566676 5689999999999863   134433322   


Q ss_pred             -CCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccC---CCCCcccEEEecccccccCCCC-eEEEeeCCCcch
Q 009673          259 -ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLG  333 (529)
Q Consensus       259 -~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~---~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~  333 (529)
                       .+..+...|+++|+++|+++|+|+++|+||+.+....+.+.   ..++++|.+++++|||+.+|.| |+++++++    
T Consensus       274 Gtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~----  349 (522)
T TIGR03799       274 GTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDP----  349 (522)
T ss_pred             cCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCH----
Confidence             23344589999999999999999999999775544332211   1123689999999999999999 99999874    


Q ss_pred             hHHHhhhccc---c---------cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecC
Q 009673          334 VELESAINNA---V---------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSG  400 (529)
Q Consensus       334 ~~l~~~i~~~---~---------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~  400 (529)
                       ++.+.+...   .         ...++|+.....+ .++.+++.+...+++++.++..+.++++.+.|++ .+++++.+
T Consensus       350 -~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al-~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~  427 (522)
T TIGR03799       350 -ALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAM-LVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTE  427 (522)
T ss_pred             -HHHHHhccCcchhcCCCCCccccceeecCcchHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecC
Confidence             333322210   0         0123455554443 5778888888788999999999999999999987 58999875


Q ss_pred             CCCCceEEEccCCCCC-------------------cH--HHHHHhHhcCCeE-EcCCCCCCCC-CCCCCCeEEEcc-CCC
Q 009673          401 GSDNHLVLVDLRPMGI-------------------DG--ARVEKILDMASIT-LNKNSVPGDK-SALVPGGIRIGS-PAM  456 (529)
Q Consensus       401 gt~~~~~~v~~~~~~i-------------------~~--~~~~~~L~~~GI~-v~~~~~Pg~~-~~~~~~~iRig~-~~~  456 (529)
                      .. -+++.+.+.+.++                   +.  ..+.+.+.+.|.. ++...+.+.. .....-.+|+.+ ...
T Consensus       428 p~-l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~  506 (522)
T TIGR03799       428 PE-LCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPL  506 (522)
T ss_pred             CC-ccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCC
Confidence            32 2333333333221                   10  2355556566654 4332222111 001124599865 333


Q ss_pred             ccCCCCHHHHHHHHHH
Q 009673          457 TTRGFSEKEFVAIADF  472 (529)
Q Consensus       457 tt~g~~~~d~~~la~~  472 (529)
                      |    +++|++.+.+-
T Consensus       507 t----t~~~i~~~l~~  518 (522)
T TIGR03799       507 T----THEILQDILDE  518 (522)
T ss_pred             C----CHHHHHHHHHH
Confidence            3    47888877653

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=99.79  E-value=5.7e-17  Score=170.83  Aligned_cols=317  Identities=14%  Similarity=0.070  Sum_probs=190.6

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK---  190 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~---  190 (529)
                      -.|.|.+++...+.. +..+.+   .+. ++...++|    ++++++++.+.     .+..+||++|+..++..+..   
T Consensus        58 ~~~~i~~a~~~~~~~-~~~~~~---~~~-~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~al~~a~~~~~  123 (401)
T PRK00854         58 CHPKILAAMVEQAGR-LTLTSR---AFR-NDQLAPLY----EELAALTGSHK-----VLPMNSGAEAVETAIKAVRKWGY  123 (401)
T ss_pred             CCHHHHHHHHHHHhh-cccccc---ccC-CHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence            378888888877743 332222   111 23344444    67788888653     35568999999999987742   


Q ss_pred             ------CC-CEEEEcCCCC-Cccccccccccccccc---cccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          191 ------PH-DRIMGLDLPH-GGHLSHGFMTPKRRVS---GTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       191 ------pG-D~Vl~~~~~~-~g~~s~g~~~~~~~i~---~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                            +| ++|++.+-.+ |.... ..........   +......+..++      ..|++++++.+.+ ++++|++++
T Consensus       124 ~~~g~~~~~~~vi~~~~~~HG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~i~~-~~~aii~e~  195 (401)
T PRK00854        124 EVKGVPEGQAEIIVCADNFHGRTLS-IVGFSTDPDARGGFGPFTPGFRVVP------FGDAEALEAAITP-NTVAFLVEP  195 (401)
T ss_pred             hccCCCCCCceEEEECCCcCCccHH-HHhccCCccccccCCCCCCCeEEeC------CCCHHHHHHHhCC-CeEEEEEcc
Confidence                  24 6787776543 32110 0000000000   000000111111      2589999999987 899999998


Q ss_pred             CCCCC--CCC----HHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEEEecccccccC--CCCeEEEeeC
Q 009673          260 SAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLRG--PRGGMIFFKK  328 (529)
Q Consensus       260 s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv~~S~hK~l~G--prgG~i~~~~  328 (529)
                      +.+++  ..+    +++|+++|++||+++|+|++|. |+...+..  ..... ..|+++++  |++.|  +++|++++++
T Consensus       196 ~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g~g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~v~~~~  272 (401)
T PRK00854        196 IQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-GLGRTGKLLAEEHEGIEADVTLIG--KALSGGFYPVSAVLSNS  272 (401)
T ss_pred             ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCchHhHHhhcCCCCCEEEec--ccccCCccCeEEEEEcH
Confidence            77764  343    9999999999999999999985 54332210  00111 36887764  99843  5789999988


Q ss_pred             CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC-CCCCceE
Q 009673          329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG-GSDNHLV  407 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~-gt~~~~~  407 (529)
                            ++.+.+.........+++.. ..++...+|+.+...   ...+++.++.+++.+.|++.+...+.. .....++
T Consensus       273 ------~~~~~l~~~~~~~t~~~~~~-~~aa~~a~L~~l~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~~  342 (401)
T PRK00854        273 ------EVLGVLKPGQHGSTFGGNPL-ACAVARAALKVLTEE---GMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLML  342 (401)
T ss_pred             ------HHHhcccCCCCCCCCCcCHH-HHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHhhccCceEEEeccceEE
Confidence                  66666653322223344333 334444467654322   245777778888999998865432211 1123444


Q ss_pred             EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .+.+.....+..++.+.|.+.||.+..         ...+.||++.+..    ++++|++++++.|++++.
T Consensus       343 ~i~~~~~~~~~~~~~~~L~~~GV~v~~---------~~~~~lR~~p~~~----~t~e~i~~~i~~l~~~l~  400 (401)
T PRK00854        343 AVELEPEAGGARQYCEALKERGLLAKD---------THDHTIRLAPPLV----ITREQVDWALEQIAKVLA  400 (401)
T ss_pred             EEEEecCchhHHHHHHHHHHCCeEEec---------CCCCEEEEeCCcc----cCHHHHHHHHHHHHHHhh
Confidence            444433223456777888888999842         1246899987643    468999999999988763

>PRK06460 hypothetical protein; Provisional

Probab=99.79  E-value=3.1e-17  Score=170.99  Aligned_cols=213  Identities=17%  Similarity=0.166  Sum_probs=145.5

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..+++|    +.+++++|.+.     .+.+++|++|+..++.++++|||+|+++++.+++.+..    +...+...|
T Consensus        43 ~~p~~~~L~----~~lA~l~g~~~-----~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~----~~~~~~~~G  109 (376)
T PRK06460         43 ANPTVLELT----KKIVELENAEM-----GVAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRF----FTDYLKNWG  109 (376)
T ss_pred             CCccHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHH----HHHHHHhhC
Confidence            344556666    67889999875     24458999999999999999999999988766543221    111223345


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  ++..++.+      +.+.+++.+++ ++|+|++++++||+  ..|+++|.++|+++|+++++|++|..+..     .
T Consensus       110 ~--~v~~~~~~------~~~~l~~~~~~-~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~-----~  175 (376)
T PRK06460        110 V--NVDASNPG------SDNIIEKAKSK-RYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPIN-----Q  175 (376)
T ss_pred             c--EEEEECCC------CHHHHHHhcCC-CceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcccc-----C
Confidence            4  44444432      23445555554 89999999999987  78999999999999999999999764421     1


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      .++. ++|+++.|+||++.|++   +|++++++      ++.+++.....+...+ ...  ..+. .+++.  ...++.+
T Consensus       176 ~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~------~l~~~l~~~~~~~g~~-~~~--~~a~-~~l~~--~~~l~~r  243 (376)
T PRK06460        176 KPLELGADIVVHSASKFLAGHNDVIAGLAAGYG------KLLNVIDQMRRTLGTS-LDP--HAAY-LTLRG--IKTLKIR  243 (376)
T ss_pred             ChhhcCCCEEEeecceeccCCCCceEEEEecCH------HHHHHHHHHHHhcCCC-CCH--HHHH-HHHhc--hhhHHHH
Confidence            2232 58999999999998875   69998877      6766665433222111 111  2221 22322  1345678


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q 009673          376 QNKVVSNCRALASRLVEL  393 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~~  393 (529)
                      ++++.+|++.+.+.|++.
T Consensus       244 ~~~~~~n~~~l~~~L~~~  261 (376)
T PRK06460        244 MDVINRNAEQIAEFLEGH  261 (376)
T ss_pred             HHHHHHHHHHHHHHHHcC
Confidence            889999999999999873

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.79  E-value=4.8e-17  Score=170.81  Aligned_cols=307  Identities=15%  Similarity=0.195  Sum_probs=189.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhc--C-CCCEEEEcCCCCCcccccccccccccccccc
Q 009673          146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAIL--K-PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       146 ~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all--~-pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      .-.+.....+++++++|++....  -+.+.+|| .++.+++.++-  + +||+|+++...|.+..        +++.+.|
T Consensus       103 ~~~l~~~~e~~~~~~~G~~~~~~--a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~--------kAi~~~G  172 (444)
T TIGR03531       103 LYKLTNKLVKDFLKLLGLRSIKS--AFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCI--------KAISTAG  172 (444)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCE--EEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHH--------HHHHHcC
Confidence            44455555688999999983221  23346777 57777777764  2 6999999886543321        4566777


Q ss_pred             ceEEEEEcc--cCCCCCCCCHHHHHHHhhhc--CCcEEEEcCCC-CC--CCCCHHHHHHHHHHhCCEEEEeccccccccc
Q 009673          222 IYFESMPYR--LDESTGLVDYDMLEKTAILF--RPKLIIAGASA-YP--RDFDYPRMRQIADAVGALLMMDMAHISGLVA  294 (529)
Q Consensus       222 ~~~~~v~~~--v~~~~~~iD~d~le~~i~~~--~pklIi~~~s~-~p--~~~d~~~i~~ia~~~g~~livD~ah~~Gli~  294 (529)
                      .  +++.++  ++++++.+|+++|+++|++.  +..++++++++ ++  ...|+++|.++|++||+|+|+|+||..+...
T Consensus       173 ~--~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~  250 (444)
T TIGR03531       173 F--EPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNK  250 (444)
T ss_pred             C--eEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChh
Confidence            6  666666  45667999999999999863  33555565554 32  3689999999999999999999998754432


Q ss_pred             ccccC-CCCC--cccEEEecccccccCCC-CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCc
Q 009673          295 ASVVA-DPFK--YCDVVTTTTHKSLRGPR-GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSP  370 (529)
Q Consensus       295 ~~~~~-~~~~--~aDiv~~S~hK~l~Gpr-gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~  370 (529)
                      ..... ..+.  .+|++++|+||++..|- ||+++++++     ++.+.+... .++...  ...... ++.++......
T Consensus       251 ~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~-----el~~~i~~~-y~g~~~--~s~~~~-~~~~ll~~G~~  321 (444)
T TIGR03531       251 YMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDE-----NFIQEISKS-YPGRAS--ASPSLD-VLITLLSLGSK  321 (444)
T ss_pred             hhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCH-----HHHHHHHHh-ccCCCC--ChHHHH-HHHHHHHhCHH
Confidence            11111 1122  37999999999986654 467777664     677766653 233221  112222 23344445556


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHh----cCcEEecCCCCCceEE-EccCCC-CCcHHHHHHhHhcCCeEEcCCCCCCCCCCC
Q 009673          371 EFKVYQNKVVSNCRALASRLVE----LGYKLVSGGSDNHLVL-VDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSAL  444 (529)
Q Consensus       371 ~~~~~~~~i~~~a~~l~~~L~~----~G~~v~~~gt~~~~~~-v~~~~~-~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~  444 (529)
                      +++++.++..++++++.+.|.+    .|..++.- ..|.+.+ +.+... +-+...+-..|-..+|.-.....||+....
T Consensus       322 g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~-~~n~is~~~~~~~~~~~~~~~~g~~l~~~~v~g~r~v~~~~~~~~  400 (444)
T TIGR03531       322 GYLELLKERKEMYKYLKELLQKLAERHGERLLDT-PENPISSAMTLSTLKGKDPTMLGSMLYSRRVTGPRVVTNGDSKTV  400 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecC-CCCceeEEEecccccccCHHHHHHHHHhCCCCCceeecCCCceEE
Confidence            7899999999999999999876    46776642 2344332 223211 223445555565555532211134442111


Q ss_pred             CCCeEEE---c-------cCCCc---cCCCCHHHHHHHHHHHHHH
Q 009673          445 VPGGIRI---G-------SPAMT---TRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       445 ~~~~iRi---g-------~~~~t---t~g~~~~d~~~la~~i~~~  476 (529)
                        ++..+   |       +|++|   .-|++++|++.+++.++++
T Consensus       401 --~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~  443 (444)
T TIGR03531       401 --GGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS  443 (444)
T ss_pred             --CCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence              12222   1       12333   3589999999999988764

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.79  E-value=2.3e-17  Score=172.17  Aligned_cols=213  Identities=22%  Similarity=0.231  Sum_probs=146.2

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..+++|    +.++++.|.+.    + +...+|++|+..++.++++|||+|+++++.|++.+....    ......+
T Consensus        49 ~~p~~~~le----~~lA~l~g~~~----v-~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~----~~~~~~~  115 (382)
T TIGR02080        49 GNPTRDLLQ----QALAELEGGAG----A-VVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLN----ALAKKGC  115 (382)
T ss_pred             CCchHHHHH----HHHHHHhCCCc----E-EEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHH----HHHhhcC
Confidence            445566777    67888888542    2 344566699999999999999999999998876432110    0001112


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                        .++..+  +    ..|++++++++++ ++|+|+++.|+||+  ..|+++|.++|+++|+++++|++|..+..     .
T Consensus       116 --~~v~~~--d----~~d~~~l~~ai~~-~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~-----~  181 (382)
T TIGR02080       116 --FRVLFV--D----QGDEQALRAALAQ-KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPAL-----Q  181 (382)
T ss_pred             --eEEEEE--C----CCCHHHHHHhcCc-CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence              233332  2    2488999999987 89999999999987  78999999999999999999999866543     2


Q ss_pred             CCCC-cccEEEecccccccCC---CCeEEEeeCCCcchhHHHhhhcccc-cCCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKV  374 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~  374 (529)
                      .++. ++|++++|+||++.|+   ++|++++++.     ++.+++.... ..+...+|.   -+.  .+++.+  ..+..
T Consensus       182 ~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~-----~~~~~l~~~~~~~g~~~sp~---~a~--l~lr~l--~tl~~  249 (382)
T TIGR02080       182 NPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDP-----QVAEELAWWANNLGVTGGAF---DSY--LTLRGL--RTLVA  249 (382)
T ss_pred             CchhhCCCEEEeecceeccCCCCceeEEEEeCCH-----HHHHHHHHHHHccCCCCCHH---HHH--HHHccc--chHHH
Confidence            2343 6899999999999775   4698888654     5666554322 112222222   111  123332  23456


Q ss_pred             HHHHHHHHHHHHHHHHHhc
Q 009673          375 YQNKVVSNCRALASRLVEL  393 (529)
Q Consensus       375 ~~~~i~~~a~~l~~~L~~~  393 (529)
                      ++++..+|+..+.+.|++.
T Consensus       250 R~~~~~~na~~~a~~L~~~  268 (382)
T TIGR02080       250 RMRLQQRNAQAIVEYLQTQ  268 (382)
T ss_pred             HHHHHHHHHHHHHHHHHhC
Confidence            6888899999999999873

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.79  E-value=2.4e-17  Score=171.69  Aligned_cols=212  Identities=15%  Similarity=0.109  Sum_probs=144.5

Q ss_pred             chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673          143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI  222 (529)
Q Consensus       143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~  222 (529)
                      ++..+.+|    +.++++.|.+.    + +...||++|+..++.++++|||+|+++++.|++.....    .......|.
T Consensus        60 npt~~~Le----~~iA~le~~~~----~-~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~----~~~l~~~Gi  126 (394)
T PRK09028         60 TPTHFAFQ----AAIVELEGGAG----T-ALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLC----DKILKGFGI  126 (394)
T ss_pred             CchHHHHH----HHHHHHhCCCc----E-EEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHH----HHhhhhcce
Confidence            44456666    56677777653    2 44578889999999999999999999998876543210    001112333


Q ss_pred             eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673          223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD  300 (529)
Q Consensus       223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~  300 (529)
                        ++..++.      .|.+.+++.+++ ++|+|++++++||+  ..|+++|+++|+++|+++++|++|..+..     ..
T Consensus       127 --~v~~v~~------~~~e~l~~~l~~-~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~-----~~  192 (394)
T PRK09028        127 --ETTYYDP------MIGEGIRELIRP-NTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN-----SR  192 (394)
T ss_pred             --EEEEECC------CCHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcccccc-----CC
Confidence              4434332      246789998877 89999999999997  67999999999999999999999876532     34


Q ss_pred             CCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHH
Q 009673          301 PFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ  376 (529)
Q Consensus       301 ~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~  376 (529)
                      |++ ++|+++.|.|||+.|+.   +|+++.++      ++.+++.....  ..|.... ...+. ..++.+  .-+.-++
T Consensus       193 Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~------~~~~~l~~~~~--~~G~~~~-p~~a~-l~~rgl--~TL~lR~  260 (394)
T PRK09028        193 PFEMGVDISIQAATKYIVGHSDVMLGTATANE------KHWDQLREHSY--LMGQCTS-PDDVY-LAMRGL--RTLGVRL  260 (394)
T ss_pred             ccccCceEEEEeCCeEecCCCCEEEEEEECCH------HHHHHHHHHHH--hcCCCCC-HHHHH-HHHccc--CcHHHHH
Confidence            555 79999999999998885   47776555      45444432211  1122111 11111 123322  2356778


Q ss_pred             HHHHHHHHHHHHHHHhc
Q 009673          377 NKVVSNCRALASRLVEL  393 (529)
Q Consensus       377 ~~i~~~a~~l~~~L~~~  393 (529)
                      ++..+|+..+++.|++.
T Consensus       261 ~~~~~na~~la~~L~~~  277 (394)
T PRK09028        261 AQHEKNALKVANWLATR  277 (394)
T ss_pred             HHHHHHHHHHHHHHhcC
Confidence            99999999999999884

>PLN02509 cystathionine beta-lyase

Probab=99.78  E-value=2.9e-17  Score=174.11  Aligned_cols=215  Identities=21%  Similarity=0.208  Sum_probs=145.7

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      |++..+.+|    +++++++|.+.     .+.++||+.|+.+ +..+++|||+|+++++.|+++.....    ..+...|
T Consensus       131 gnpt~~aLE----~~lA~leg~e~-----ai~~~SG~aAi~~-il~ll~~GD~VI~~~~~y~~t~~ll~----~~l~~~G  196 (464)
T PLN02509        131 GNPTRDALE----SLLAKLDKADR-----AFCFTSGMAALSA-VTHLIKNGEEIVAGDDVYGGSDRLLS----QVVPRSG  196 (464)
T ss_pred             CCHHHHHHH----HHHHHHhCCCE-----EEEeCcHHHHHHH-HHHHhCCCCEEEEcCCchhhHHHHHH----HHHHHCC
Confidence            667777777    67788888664     2556888887754 44679999999999988765421000    0112234


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  +++.++      ..|++++++.+++ ++|+|++++++||+  ..|+++|+++|+++|+++++|++|..+...     
T Consensus       197 ~--~v~~vd------~~d~e~l~~ai~~-~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~-----  262 (464)
T PLN02509        197 V--VVKRVN------TTNLDEVAAAIGP-QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLS-----  262 (464)
T ss_pred             e--EEEEeC------CCCHHHHHHhCCc-CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccC-----
Confidence            3  555543      2478999999987 89999999998886  779999999999999999999998776542     


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      .++. ++|++++|+||++.|+.   ||+++++++     .+.+.+......  .|+......++  ..++.+  ..+..+
T Consensus       263 ~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~-----~l~~~~~~~~~~--~g~~l~p~~A~--l~lr~L--~tL~~R  331 (464)
T PLN02509        263 RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-----KLAKEVYFLQNS--EGSGLAPFDCW--LCLRGI--KTMALR  331 (464)
T ss_pred             ChhhcCCcEEEecCcccccCCCccceeEEEeccH-----HHHHHHHHHHHh--cCCCcCHHHHH--HHHhhh--hhHHHH
Confidence            2343 79999999999998865   588887663     343333211110  11111111121  123322  234677


Q ss_pred             HHHHHHHHHHHHHHHHh-cCc
Q 009673          376 QNKVVSNCRALASRLVE-LGY  395 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~-~G~  395 (529)
                      +++..+++..+.+.|++ +.+
T Consensus       332 ~~r~~~nA~~la~~L~~~p~V  352 (464)
T PLN02509        332 IEKQQENARKIAMYLSSHPRV  352 (464)
T ss_pred             HHHHHHHHHHHHHHHhcCCCc
Confidence            89999999999999987 344

>PRK07505 hypothetical protein; Provisional

Probab=99.78  E-value=3.5e-16  Score=164.87  Aligned_cols=331  Identities=15%  Similarity=0.138  Sum_probs=189.1

Q ss_pred             ceeEecCCCCC----cHHHHHHHhhhhhccCC-CCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673          104 SLELIASENFT----SRAVMEAVGSCLTNKYS-EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS  178 (529)
Q Consensus       104 ~i~L~asen~~----~~~V~eal~~~l~~~y~-~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs  178 (529)
                      .|++... +++    +|+|++|+...+. +|. .+....+.....+...+    ..+.+++++|.  +    .+..+||+
T Consensus        48 ~ld~~s~-~~lgl~~~p~v~~A~~~~l~-~~g~~~~~~~~~~~~~~~~~~----l~~~la~~~~~--~----~~~~~sG~  115 (402)
T PRK07505         48 FVNFVSC-SYLGLDTHPAIIEGAVDALK-RTGSLHLSSSRTRVRSQILKD----LEEALSELFGA--S----VLTFTSCS  115 (402)
T ss_pred             EEEeecC-CccCCCCCHHHHHHHHHHHH-HhCCCCCCccchhhhhHHHHH----HHHHHHHHhCC--C----EEEECChH
Confidence            4666543 343    8999999998875 342 11111221112233333    34788889987  2    24457999


Q ss_pred             HHHHHHHHhh----cCCCC-EEEEcCC-CCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCC
Q 009673          179 PANFEVYTAI----LKPHD-RIMGLDL-PHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRP  252 (529)
Q Consensus       179 ~A~~~~l~al----l~pGD-~Vl~~~~-~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~p  252 (529)
                      +|+..++..+    ..+|+ .|++.+. .|++..  ++    ......+.  +++.++.      .|++++++++++ ++
T Consensus       116 ~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~--~~----~~~~~~~~--~v~~~~~------~d~~~l~~~~~~-~~  180 (402)
T PRK07505        116 AAHLGILPLLASGHLTGGVPPHMVFDKNAHASLN--IL----KGICADET--EVETIDH------NDLDALEDICKT-NK  180 (402)
T ss_pred             HHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHH--hh----hhhhhcCC--eEEEeCC------CCHHHHHHHHhc-CC
Confidence            9998777543    22343 2444443 333211  00    01111122  4445442      488999998876 67


Q ss_pred             cEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccccc-ccc-c---CCC--CCcccEEEecccccccCCCCeE
Q 009673          253 KLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVA-ASV-V---ADP--FKYCDVVTTTTHKSLRGPRGGM  323 (529)
Q Consensus       253 klIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~-~~~-~---~~~--~~~aDiv~~S~hK~l~GprgG~  323 (529)
                      ++++++.|++|+  ..++++|.++|+++|++||+|++|..+... .+. .   ...  .....++++|++|.++++ ||+
T Consensus       181 ~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~-Gg~  259 (402)
T PRK07505        181 TVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS-GGV  259 (402)
T ss_pred             CEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc-CeE
Confidence            888887777775  788999999999999999999998643221 111 0   011  112347788999998644 788


Q ss_pred             EEeeCCCcchhHHHhhhcccccCCCC-CCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC
Q 009673          324 IFFKKDPVLGVELESAINNAVFPGLQ-GGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS  402 (529)
Q Consensus       324 i~~~~~~~~~~~l~~~i~~~~~p~~~-g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt  402 (529)
                      ++..++     ++.+.+.....+... ++++...+++...+++....+.+.+..+++.++.+.+.+.+...     ..+.
T Consensus       260 ~~~~~~-----~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~g~  329 (402)
T PRK07505        260 IMLGDA-----EQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE-----QSGS  329 (402)
T ss_pred             EEeCCH-----HHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-----CCCC
Confidence            876432     666666553333332 34444556555556664444444555555555554443332211     1111


Q ss_pred             CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          403 DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       403 ~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      ...+.++.+.. ..+...+.+.|.+.||.+.....|..  +.....|||+.+..    ++++|++++++.|++++..
T Consensus       330 ~~~i~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~~p~~--~~~~~~lRi~~~~~----~t~eei~~~~~~l~~~l~~  399 (402)
T PRK07505        330 FLPIRLIYIGD-EDTAIKAAKQLLDRGFYTSPVFFPVV--AKGRAGLRIMFRAS----HTNDEIKRLCSLLKEILDE  399 (402)
T ss_pred             CCCEEEEEeCC-HHHHHHHHHHHHHCCCeEeeecCCCC--CCCCceEEEecCcc----CCHHHHHHHHHHHHHHHHh
Confidence            11112222221 11245677788889999965433321  11236899987654    4589999999999988764

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.78  E-value=5.1e-17  Score=168.90  Aligned_cols=213  Identities=13%  Similarity=0.069  Sum_probs=149.7

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      |++..+.+|    ++++++-|.+.     -+.+.||+.|+.+++.++++|||+|++.+..|++.....    .......|
T Consensus        60 ~nPt~~~le----~~la~LEg~~~-----a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~----~~~l~~~G  126 (395)
T PRK08114         60 GTLTHFSLQ----EAMCELEGGAG-----CALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFC----SKILSKLG  126 (395)
T ss_pred             CChhHHHHH----HHHHHHhCCCe-----EEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHH----HHHHHhcC
Confidence            677788888    67788888765     245688999999999999999999999887776543211    00111224


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhC--CEEEEecccccccccccc
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVG--ALLMMDMAHISGLVAASV  297 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g--~~livD~ah~~Gli~~~~  297 (529)
                      .  ++..++      ..|.+++++++++ ++|+|++..+.||+  ..|+++|+++|+++|  +++++|+++..++.    
T Consensus       127 i--~v~~vd------~~d~~~l~~~l~~-~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~----  193 (395)
T PRK08114        127 V--TTTWFD------PLIGADIAKLIQP-NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL----  193 (395)
T ss_pred             c--EEEEEC------CCCHHHHHHhcCC-CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc----
Confidence            3  444543      2478999999987 89999999988887  789999999999985  99999999877654    


Q ss_pred             cCCCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHH
Q 009673          298 VADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK  373 (529)
Q Consensus       298 ~~~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~  373 (529)
                       ..|++ ++|+++.|.||++.|+.   +|.++.++      ++.+.+.....  ..|. ......+. ..++.+  .-+.
T Consensus       194 -~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~------~~~~~l~~~~~--~~G~-~~~p~~a~-l~~rgl--~TL~  260 (395)
T PRK08114        194 -FKALDFGIDISIQAGTKYLVGHSDAMIGTAVANA------RCWEQLRENSY--LMGQ-MVDADTAY-MTSRGL--RTLG  260 (395)
T ss_pred             -cCHHHcCCcEEEEcCcccccCCCcceeEEEEcCH------HHHHHHHHHHH--hccC-CCCHHHHH-HHHcCC--CcHH
Confidence             34454 79999999999999984   48777665      44444432211  1222 11111111 122322  2245


Q ss_pred             HHHHHHHHHHHHHHHHHHhc
Q 009673          374 VYQNKVVSNCRALASRLVEL  393 (529)
Q Consensus       374 ~~~~~i~~~a~~l~~~L~~~  393 (529)
                      -++++..+|+..+++.|++.
T Consensus       261 lR~~~~~~na~~va~~L~~h  280 (395)
T PRK08114        261 VRLRQHEESSLKVAEWLAEH  280 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHcC
Confidence            67899999999999999984

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.77  E-value=4.4e-17  Score=169.80  Aligned_cols=215  Identities=19%  Similarity=0.175  Sum_probs=147.6

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..+++|    +.+++++|.+.     .+.+.||+.|+..++ ++++|||+|+++++.|++.+....    ..+...|
T Consensus        48 ~~p~~~~Le----~~lA~l~g~~~-----~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~----~~~~~~G  113 (377)
T PRK07671         48 GNPTRAALE----ELIAVLEGGHA-----GFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMT----KVLNRFG  113 (377)
T ss_pred             CChHHHHHH----HHHHHHhCCCc-----eEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHH----HHHhcCC
Confidence            456667777    67889999875     255689998877654 688999999999998765432110    0112234


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  +++.++      ..|++++++++++ ++|+|++++|+||+  ..|+++|.++|+++|+++++|+++..+..     .
T Consensus       114 ~--~v~~v~------~~d~~~l~~ai~~-~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~-----~  179 (377)
T PRK07671        114 I--EHTFVD------TSNLEEVEEAIRP-NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYW-----Q  179 (377)
T ss_pred             e--EEEEEC------CCCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCcccc-----C
Confidence            3  555544      2489999999987 89999999999986  78999999999999999999999654322     2


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      .++. ++|++++|++|++.|+.   +|+++++++     ++.+++......  .|+......+.  .+++.+  ..+..+
T Consensus       180 ~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~-----~l~~~~~~~~~~--~g~~~~~~~a~--l~~~~l--~tl~~R  248 (377)
T PRK07671        180 SPISLGADIVLHSATKYLGGHSDVVAGLVVVNSP-----ELAEDLHFVQNS--TGGILGPQDSW--LLLRGL--KTLGIR  248 (377)
T ss_pred             ChhhhCCeEEEecCcccccCCccceeEEEEeCcH-----HHHHHHHHHHHh--hcCCCCHHHHH--HHHcCc--ChHHHH
Confidence            3444 78999999999998875   588877664     566655432211  11111111111  123322  224567


Q ss_pred             HHHHHHHHHHHHHHHHh-cCc
Q 009673          376 QNKVVSNCRALASRLVE-LGY  395 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~-~G~  395 (529)
                      +++..+|+..+.+.|++ .++
T Consensus       249 ~~~~~~na~~la~~L~~~~~v  269 (377)
T PRK07671        249 MEEHETNSRAIAEFLNNHPAV  269 (377)
T ss_pred             HHHHHHHHHHHHHHHHcCCCe
Confidence            88889999999999987 344

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.77  E-value=5.1e-17  Score=171.68  Aligned_cols=161  Identities=19%  Similarity=0.181  Sum_probs=121.6

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..+.+|    +.+++++|.+.     .|.++||+.|+.+++.+++++||+|++++..|++......    ..+...|
T Consensus        67 ~~pt~~~le----~~la~l~g~~~-----~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~----~~l~~~G  133 (437)
T PRK05613         67 TNPTVEALE----NRIASLEGGVH-----AVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFL----VTLNRLG  133 (437)
T ss_pred             cChHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHH----HHHHhcC
Confidence            456667777    77889999864     4667999999999999999999999999888877632110    0112234


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                        +++..++ ++    .|++++++.+++ ++++|++..+.||.  ..|+++|+++|+++|+++++|++|..|..     .
T Consensus       134 --i~v~~vd-~~----~d~e~l~~~l~~-~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~-----~  200 (437)
T PRK05613        134 --IEVTFVE-NP----DDPESWQAAVQP-NTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAAL-----V  200 (437)
T ss_pred             --eEEEEEC-CC----CCHHHHHHhCCc-cCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccc-----c
Confidence              3666654 22    289999999988 89999887776664  78999999999999999999999876643     2


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeC
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK  328 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~  328 (529)
                      .+++ ++|++++|+||+++|..   ||+++.+.
T Consensus       201 ~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~  233 (437)
T PRK05613        201 RPLELGADVVVASLTKFYTGNGSGLGGVLIDGG  233 (437)
T ss_pred             ChHHhCCCEEEeeccceecCCCcceeEEEEecC
Confidence            3344 79999999999997753   47776543

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=99.77  E-value=9.6e-17  Score=167.64  Aligned_cols=311  Identities=17%  Similarity=0.144  Sum_probs=188.1

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh---cC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---LK  190 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al---l~  190 (529)
                      .+|.|.+++...+... .  ....+ |. .+...++|    +++++++|.+.     .+...||++|+..++.++   ..
T Consensus        44 ~~p~v~~a~~~~~~~~-~--~~~~~-~~-~~~~~~l~----~~la~~~g~~~-----~~~~~sg~~a~~~a~~~~~~~~~  109 (379)
T TIGR00707        44 AHPKLVEALKEQLEKL-V--HVSNL-YY-TEPQEELA----EKLVEHSGADR-----VFFCNSGAEANEAALKLARKYTG  109 (379)
T ss_pred             CCHHHHHHHHHHHhhc-c--ccccc-cC-CHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHhh
Confidence            4589999988766432 1  11112 22 23344444    78888999763     244577889999888755   22


Q ss_pred             ----CCCEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCC-C--CCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673          191 ----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST-G--LVDYDMLEKTAILFRPKLIIAGASAY  262 (529)
Q Consensus       191 ----pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~~-~--~iD~d~le~~i~~~~pklIi~~~s~~  262 (529)
                          +||+|+++++.+.++.....       ...+.. +.....++..+. .  ..|++++++.+++ ++++|+++.+++
T Consensus       110 ~~~~~~~~vi~~~~~yh~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~p~~~  181 (379)
T TIGR00707       110 DKGKEKKKIIAFENSFHGRTMGAL-------SATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDD-ETAAVIVEPIQG  181 (379)
T ss_pred             ccCCCCCeEEEECCCcCCccHHHH-------HhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhh-CeeEEEEEcccc
Confidence                47999999987644321110       000100 000011121111 1  1289999999987 789999975554


Q ss_pred             CC-C--C---CHHHHHHHHHHhCCEEEEecccccccccccccCCC---CC-cccEEEecccccc-cCCCCeEEEeeCCCc
Q 009673          263 PR-D--F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPV  331 (529)
Q Consensus       263 p~-~--~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~~-~aDiv~~S~hK~l-~GprgG~i~~~~~~~  331 (529)
                      ++ .  .   ++++|.++|+++|+++++|++|. ++...+. ..+   .. ..|++  +++|++ +|+|.|++++++   
T Consensus       182 ~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~-~~~~~g~-~~~~~~~~~~~d~~--t~sK~~~~G~riG~~~~~~---  254 (379)
T TIGR00707       182 EGGVNPASAEFLKALREICKDKDALLIFDEVQT-GIGRTGK-FFAYEHYGIEPDII--TLAKGLGGGVPIGATLAKE---  254 (379)
T ss_pred             CCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccch-hhhHHhcCCCCCEE--EEcccccCCcccEEEEEcH---
Confidence            43 2  2   37899999999999999999974 5433221 111   11 34665  468998 567889999987   


Q ss_pred             chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEe-cC-CCCCceEEE
Q 009673          332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV-SG-GSDNHLVLV  409 (529)
Q Consensus       332 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~-~~-gt~~~~~~v  409 (529)
                         ++.+.+.........+. +...+++...+|+.+..   .++.+++.++++.+.+.|.+.+.... .. .....++++
T Consensus       255 ---~~~~~~~~~~~~~~~~~-~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~  327 (379)
T TIGR00707       255 ---EVAEAFTPGDHGSTFGG-NPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEELGKNYPNKEVRGKGLMLGI  327 (379)
T ss_pred             ---HHHhhhcCCCCCCCCCC-CHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHhhCCCCccccCceEEEE
Confidence               67777654322222333 33344444456765432   24567777788888888876433221 10 012345566


Q ss_pred             ccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          410 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       410 ~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      .+..   +..++.+.|.+.||.+..    +     ..+++||+.+..    .++++++++.+.|+++
T Consensus       328 ~~~~---~~~~~~~~l~~~Gv~v~~----~-----~~~~lRi~~~~~----~t~~~i~~~~~~l~~~  378 (379)
T TIGR00707       328 ELEA---PCKDIVKKALEKGLLVNC----A-----GPKVLRFLPPLI----ITKEEIDEAVSALEEA  378 (379)
T ss_pred             EecC---cHHHHHHHHHHCCcEEee----C-----CCCEEEEECCCc----CCHHHHHHHHHHHHHh
Confidence            5542   356788889999999953    2     246899986543    3589999999999765

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>PRK13578 ornithine decarboxylase; Provisional

Probab=99.77  E-value=2.4e-17  Score=180.10  Aligned_cols=297  Identities=18%  Similarity=0.153  Sum_probs=197.4

Q ss_pred             HHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcc
Q 009673          152 LCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR  230 (529)
Q Consensus       152 ~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~  230 (529)
                      .+++.++++||++...+     +++|| .+|.++++++++|||+||+...+|-+.+ |+      ++.++|+  .++++.
T Consensus       178 eAq~~AA~~fgAd~tyF-----lvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~-hg------aLiLsGa--~PVYl~  243 (720)
T PRK13578        178 DAQKHAAKVFNADKTYF-----VLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNH-HG------ALIQAGA--TPVYLE  243 (720)
T ss_pred             HHHHHHHHHhCCCceEE-----EeCChhHHHHHHHHHhcCCCCEEEeecccHHHHH-HH------HHHHcCC--eEEEee
Confidence            35688999999998633     36777 8999999999999999999887665432 22      1345665  666543


Q ss_pred             cCC-CC---CCCCHHH-----HHHHhhhc--------C-CcEEEEcCCCCCC-CCCHHHHHHH-HHHhCCEEEEeccccc
Q 009673          231 LDE-ST---GLVDYDM-----LEKTAILF--------R-PKLIIAGASAYPR-DFDYPRMRQI-ADAVGALLMMDMAHIS  290 (529)
Q Consensus       231 v~~-~~---~~iD~d~-----le~~i~~~--------~-pklIi~~~s~~p~-~~d~~~i~~i-a~~~g~~livD~ah~~  290 (529)
                      -.. ..   +.|+.+.     |++++.++        + .+++++.+|+|-+ ..|++.|.++ ++.++ +|++|+||+.
T Consensus       244 P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhga  322 (720)
T PRK13578        244 TARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVG  322 (720)
T ss_pred             ccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchh
Confidence            221 11   3456544     88888764        2 3888898888776 7799999998 68888 9999999987


Q ss_pred             ccccccc----cCCCCC-ccc----EEEecccccccCCCC-eEEEeeCCCcch---hHHHhhhcccccCCCCCCChHHHH
Q 009673          291 GLVAASV----VADPFK-YCD----VVTTTTHKSLRGPRG-GMIFFKKDPVLG---VELESAINNAVFPGLQGGPHNHTI  357 (529)
Q Consensus       291 Gli~~~~----~~~~~~-~aD----iv~~S~hK~l~Gprg-G~i~~~~~~~~~---~~l~~~i~~~~~p~~~g~p~~~~i  357 (529)
                      .+.+.+.    .++.+. ++|    +++.|+||+|++... ++|..++.....   +--.++++.+..-..+.+|++..+
T Consensus       323 h~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qSTSPsY~Lm  402 (720)
T PRK13578        323 YEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFMLHASTSPFYPLF  402 (720)
T ss_pred             hhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHHHHHcCCChHHHHH
Confidence            6654332    112233 788    999999999988766 788776531000   000234554433334578999999


Q ss_pred             HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH-Hh-cCcEEecC---------------------------CC------
Q 009673          358 GGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL-VE-LGYKLVSG---------------------------GS------  402 (529)
Q Consensus       358 aala~al~~~~~~~~~~~~~~i~~~a~~l~~~L-~~-~G~~v~~~---------------------------gt------  402 (529)
                      |++-+|...+.....++..++..+.+..+++.| +. .++.++.+                           +.      
T Consensus       403 ASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~~whgf~  482 (720)
T PRK13578        403 AALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFE  482 (720)
T ss_pred             HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccccccCccccccc
Confidence            999887666544344677778888888888888 43 46666521                           00      


Q ss_pred             ---------CCceEEEccCCCCCc------------HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCC
Q 009673          403 ---------DNHLVLVDLRPMGID------------GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF  461 (529)
Q Consensus       403 ---------~~~~~~v~~~~~~i~------------~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~  461 (529)
                               |.--+++.+  .|++            +..+.+.|++.||.+.+..         ...+=+    +.+.|.
T Consensus       483 ~~~~~~~~lDP~KltI~t--~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d---------~~~vL~----l~s~g~  547 (720)
T PRK13578        483 GYAEDQYFVDPCKLLLTT--PGIDAETGEYEDFGIPATILANYLRENGIVPEKCD---------LNSILF----LLTPAE  547 (720)
T ss_pred             cccccccccCCceEEEEc--CCcCcccccccccCccHHHHHHHHHHcCCEEEecC---------CCeEEE----EeCCCC
Confidence                     111112222  2344            6889999977799997642         122222    444577


Q ss_pred             CHHHHHHHHHHHHHHHH
Q 009673          462 SEKEFVAIADFIHEGVE  478 (529)
Q Consensus       462 ~~~d~~~la~~i~~~~~  478 (529)
                      ++++++++.+.|.+.-+
T Consensus       548 t~~~~~~Lv~aL~~f~~  564 (720)
T PRK13578        548 DMAKLQQLVAMLARFEK  564 (720)
T ss_pred             CHHHHHHHHHHHHHHHH
Confidence            89999999998887633

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.77  E-value=1.7e-16  Score=165.47  Aligned_cols=213  Identities=16%  Similarity=0.128  Sum_probs=145.5

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++....+|    ++++++.|.+.     .+.++||+.|+.+++ ++++|||+|+++++.|++.+....    ..+...|
T Consensus        48 ~~p~~~~Le----~~la~l~g~~~-----al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~----~~~~~~g  113 (380)
T PRK06176         48 GNPTRFALE----ELIADLEGGVK-----GFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFD----KVLVKNG  113 (380)
T ss_pred             CChhHHHHH----HHHHHHhCCCC-----EEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHH----HHHHhcC
Confidence            456677777    67889999876     255699999888655 578999999999988766542110    0112223


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                        +++..++      ..|++++++.+++ ++++|++..|+||+  ..|+++|.++|+++|+++|+|+++..+..     .
T Consensus       114 --i~v~~vd------~~d~e~l~~ai~~-~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~-----~  179 (380)
T PRK06176        114 --LSCTIID------TSDLSQIKKAIKP-NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYY-----Q  179 (380)
T ss_pred             --eEEEEcC------CCCHHHHHHhcCc-CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCcccccc-----C
Confidence              3544443      2489999999987 89999999888886  77999999999999999999999765432     2


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      .|+. ++|++++|+||++.|+.   ||+++.+++     ++.+++.....  ..|.... ...+ ...++.+  ..+..+
T Consensus       180 ~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~-----~~~~~~~~~~~--~~G~~~~-~~~~-~l~~~gl--~tl~~R  248 (380)
T PRK06176        180 NPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNE-----ALAQEIAFFQN--AIGGVLG-PQDS-WLLQRGI--KTLGLR  248 (380)
T ss_pred             CccccCCCEEEecCceeccCCccceeeEEEecHH-----HHHHHHHHHHH--HhcCCCC-HHHH-HHHHhcc--CcHHHH
Confidence            3444 79999999999998865   688888653     55555432211  1111000 0111 1111111  234567


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q 009673          376 QNKVVSNCRALASRLVEL  393 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~~  393 (529)
                      +++..+|+..+.+.|++.
T Consensus       249 ~~~~~~~a~~la~~L~~~  266 (380)
T PRK06176        249 MEAHQKNALCVAEFLEKH  266 (380)
T ss_pred             HHHHHHHHHHHHHHHHhC
Confidence            788889999999999873

>PRK05939 hypothetical protein; Provisional

Probab=99.77  E-value=8.1e-17  Score=168.72  Aligned_cols=157  Identities=17%  Similarity=0.149  Sum_probs=121.8

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      |++.++.+|    +.++++.|.+.     .|.++||+.|+..++.++++|||+|+++++.|+++.....     .+...|
T Consensus        45 g~p~~~~lE----~~la~leg~~~-----~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~-----~l~~~G  110 (397)
T PRK05939         45 GTPTTAALE----AKITKMEGGVG-----TVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFG-----TLRGLG  110 (397)
T ss_pred             CCHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHH-----HHHhcC
Confidence            677888888    67888999876     3567899999999999999999999999988877643211     122334


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  +++.+++      .|+|++++.+++ ++++|+++.++||+  ..|+++|+++|+++|+++++|++|..+...     
T Consensus       111 ~--~v~~v~~------~d~e~l~~~l~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~~-----  176 (397)
T PRK05939        111 V--EVTMVDA------TDVQNVAAAIRP-NTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWLF-----  176 (397)
T ss_pred             C--EEEEECC------CCHHHHHHhCCC-CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccccccc-----
Confidence            4  5555543      389999999987 89999999888886  679999999999999999999998766421     


Q ss_pred             CCCC-cccEEEecccccccCCCC--eEEEe
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPRG--GMIFF  326 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gprg--G~i~~  326 (529)
                      .+.. ++|+++.|+||++.|+..  |.++.
T Consensus       177 ~~~~~gaDivv~S~sK~~~g~g~~igg~v~  206 (397)
T PRK05939        177 RPKDVGASLVINSLSKYIAGHGNALGGAVT  206 (397)
T ss_pred             CccccCCEEEEecCeecccCCCCeEEEEEe
Confidence            2333 799999999999976432  44444

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.77  E-value=6.3e-17  Score=170.12  Aligned_cols=159  Identities=16%  Similarity=0.194  Sum_probs=122.2

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      |++.++.+|    +.++++.|...    + |.+.||+.|+.+++.++++|||+|+++.+.|++.....    ...+...|
T Consensus        59 ~nPtv~~lE----~~la~leg~~~----a-v~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~----~~~l~~~G  125 (432)
T PRK06702         59 GNPTLAAFE----QKLAELEGGVG----A-VATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLF----GVSLRKLG  125 (432)
T ss_pred             CCcHHHHHH----HHHHHHhCCCc----E-EEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHH----HHHHHHCC
Confidence            457788888    67888999876    2 55789999999999999999999999998876543210    00123345


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  ++..++     ..+|+++++++|++ +||+|++..++||+  ..|+++|+++|+++|+++++|++....     ...
T Consensus       126 i--~v~~vd-----~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP-----~~~  192 (432)
T PRK06702        126 I--DVTFFN-----PNLTADEIVALAND-KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATP-----YLC  192 (432)
T ss_pred             C--EEEEEC-----CCCCHHHHHHhCCc-CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCch-----hhC
Confidence            4  555543     24789999999998 89999999888887  679999999999999999999984322     223


Q ss_pred             CCCC-cccEEEecccccccCCCC---eEEEe
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPRG---GMIFF  326 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gprg---G~i~~  326 (529)
                      .|++ ++||++.|++|++.|.-.   |.++.
T Consensus       193 ~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~  223 (432)
T PRK06702        193 QAFEHGANIIVHSTTKYIDGHASSLGGIVID  223 (432)
T ss_pred             ChhhcCCCEEEEccccccCCCcceeceEEEe
Confidence            4565 799999999999977654   55553

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.77  E-value=8.4e-17  Score=167.21  Aligned_cols=282  Identities=18%  Similarity=0.176  Sum_probs=172.0

Q ss_pred             chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673          143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI  222 (529)
Q Consensus       143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~  222 (529)
                      ++...++|    +.++++++  .+    .|.++||+.|+..++.++++|||+|+++++.|++.....    ...+...| 
T Consensus        50 ~p~~~~Le----~~lA~l~~--~~----~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~----~~~l~~~G-  114 (366)
T PRK07582         50 NPTWRALE----AALGELEG--AE----ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALA----REYLAPLG-  114 (366)
T ss_pred             CccHHHHH----HHHHHHcC--CC----EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHH----HHHHhcCe-
Confidence            34456666    55677772  22    466799999999999999999999999988765432110    00111234 


Q ss_pred             eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673          223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD  300 (529)
Q Consensus       223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~  300 (529)
                       .+++.++.+. .    .+    .+.+ ++++|+++.|+||+  ..|+++|.++|+++|+++++|++|....   +  ..
T Consensus       115 -~~v~~v~~~~-~----~~----~~~~-~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~---~--~~  178 (366)
T PRK07582        115 -VTVREAPTAG-M----AE----AALA-GADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPL---G--QR  178 (366)
T ss_pred             -EEEEEECCCC-h----HH----Hhcc-CceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCcc---c--cC
Confidence             3666665431 1    11    2223 78999999999987  6799999999999999999999975321   1  12


Q ss_pred             CCC-cccEEEecccccccCCCC---eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHH
Q 009673          301 PFK-YCDVVTTTTHKSLRGPRG---GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ  376 (529)
Q Consensus       301 ~~~-~aDiv~~S~hK~l~Gprg---G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~  376 (529)
                      |++ ++|++++|+||+++|+.|   |+++++++     ++.+++...... ....+.... +.  .+++.+.  .+..++
T Consensus       179 p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~-----~l~~~l~~~~~~-~g~~~~~~~-a~--l~~r~l~--tl~~R~  247 (366)
T PRK07582        179 PLELGADLVVASDTKALTGHSDLLLGYVAGRDP-----ELMAAVERWRLL-AGAIPGPFE-AW--LAHRSLG--TLGLRF  247 (366)
T ss_pred             chhcCCcEEEecccccccCCCCeeEEEEEcCcH-----HHHHHHHHHHHH-hCCCCCHHH-HH--HHHhccc--cHHHHH
Confidence            333 689999999999988764   99888653     566655432111 111122111 11  1222222  245667


Q ss_pred             HHHHHHHHHHHHHHHh-cCcEE-ecCCC---------------CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCC
Q 009673          377 NKVVSNCRALASRLVE-LGYKL-VSGGS---------------DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPG  439 (529)
Q Consensus       377 ~~i~~~a~~l~~~L~~-~G~~v-~~~gt---------------~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg  439 (529)
                      ++..+|+..+++.|++ +.+.- ..++-               .+.++.+++.    +.+.+.+.|+..++.....++-|
T Consensus       248 ~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~----~~~~~~~~~~~l~~~~~~~s~G~  323 (366)
T PRK07582        248 ARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA----DAAAAERFVAASRLVVAATSFGG  323 (366)
T ss_pred             HHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC----CHHHHHHHHHhCCcceecccCCC
Confidence            8889999999999988 34432 22221               1223444443    45667788888877653221111


Q ss_pred             CCC----------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          440 DKS----------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       440 ~~~----------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ..+          ...++-||+++..        ||.+.+.+-|.+++.
T Consensus       324 ~~sl~~~~~~~~~~~~~~liR~svGl--------E~~~dli~dl~~al~  364 (366)
T PRK07582        324 VHTSADRRARWGDAVPEGFVRLSCGI--------EDTDDLVADLERALD  364 (366)
T ss_pred             ccchhhhHHHcCCCCCCCeEEEEecc--------CCHHHHHHHHHHHHh
Confidence            000          1224579998763        445555555555543

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=99.76  E-value=1.8e-16  Score=173.14  Aligned_cols=290  Identities=16%  Similarity=0.142  Sum_probs=197.1

Q ss_pred             HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673          153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL  231 (529)
Q Consensus       153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v  231 (529)
                      +++.+++.||++...+     +++|| .+|.++++++++|||+||+...+|-+.+ |       .+.++|+  .++++.-
T Consensus       200 Ae~~aA~~fgAd~tyf-----vvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~-~-------aLilsga--~PVYl~P  264 (713)
T PRK15399        200 AEEYIARTFGAEQSYI-----VTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLA-H-------LLMMSDV--VPIWLKP  264 (713)
T ss_pred             HHHHHHHHhCCCcEEE-----EeCChHHHHHHHHHHhcCCCCEEEeecccHHHHH-H-------HHHHcCC--eeEEecc
Confidence            5588899999998532     36786 8999999999999999999887665543 2       3445665  6666432


Q ss_pred             CC-CC---CCCCH-----HHHHHHhhhc----CCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEE-EEeccccccccccc
Q 009673          232 DE-ST---GLVDY-----DMLEKTAILF----RPKLIIAGASAYPR-DFDYPRMRQIADAVGALL-MMDMAHISGLVAAS  296 (529)
Q Consensus       232 ~~-~~---~~iD~-----d~le~~i~~~----~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~l-ivD~ah~~Gli~~~  296 (529)
                      .. ..   +.|+.     +.|++++.++    +|+.+++.+|+|-+ ..|++.|.++|   |+.+ ++|+||+....+..
T Consensus       265 ~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p  341 (713)
T PRK15399        265 TRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHP  341 (713)
T ss_pred             cccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCc
Confidence            21 11   34555     8899888753    45688888888776 67999999888   6766 69999986554333


Q ss_pred             ccC--CCCC---cccEE---EecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh
Q 009673          297 VVA--DPFK---YCDVV---TTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA  367 (529)
Q Consensus       297 ~~~--~~~~---~aDiv---~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~  367 (529)
                      ..+  +++.   ++|.+   +.|+||+|++... ++|..+...    + .++++.+..-..+.+|++..+|++.+|...+
T Consensus       342 ~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~v----d-~~~~n~a~~m~~STSPsY~LmASLD~a~~~m  416 (713)
T PRK15399        342 IYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEY----D-EETFNEAFMMHTSTSPSYPIVASVETAAAML  416 (713)
T ss_pred             ccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCC----C-HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH
Confidence            222  2332   46766   9999999998766 788775521    1 2345544333345789999999999887776


Q ss_pred             cCchHHHHHHHHHHHHHHHHHHHHhc-C------cEEecC-------------C---------------CCCceEEEccC
Q 009673          368 QSPEFKVYQNKVVSNCRALASRLVEL-G------YKLVSG-------------G---------------SDNHLVLVDLR  412 (529)
Q Consensus       368 ~~~~~~~~~~~i~~~a~~l~~~L~~~-G------~~v~~~-------------g---------------t~~~~~~v~~~  412 (529)
                      .....++..++.++.+..+++.|.+. +      |.++.+             +               .|.--+++..+
T Consensus       417 ~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~  496 (713)
T PRK15399        417 RGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTP  496 (713)
T ss_pred             HhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEec
Confidence            54344677778888888888888763 3      344421             0               01111233332


Q ss_pred             ---------CCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          413 ---------PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       413 ---------~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                               ..|+++..+.+.|+++||.+.+..         ...+=+    +.+.|.++++++++.+.|.+.-+
T Consensus       497 g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d---------~~~vL~----l~s~g~t~~~~~~L~~aL~~f~~  558 (713)
T PRK15399        497 GMDEQGNMSEEGIPAALVAKFLDERGIVVEKTG---------PYNLLF----LFSIGIDKTKAMGLLRGLTEFKR  558 (713)
T ss_pred             CcccccccccCCCCHHHHHHHHHHcCCEEEecC---------CCeEEE----EeCCCCCHHHHHHHHHHHHHHHH
Confidence                     347888899999999999997641         122222    44557789999999998887643

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.76  E-value=1.6e-16  Score=165.31  Aligned_cols=214  Identities=17%  Similarity=0.057  Sum_probs=146.8

Q ss_pred             CCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccc
Q 009673          141 GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT  220 (529)
Q Consensus       141 ~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~  220 (529)
                      .|++..+.+|    ++++.+-+.+.     .|.++||++|+.+++.++++|||+|+++++.|++......    ......
T Consensus        61 ~gnPt~~~Le----~~la~le~~~~-----~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~----~~l~~~  127 (395)
T PRK05967         61 RGTPTTDALC----KAIDALEGSAG-----TILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCD----TMLKRL  127 (395)
T ss_pred             CCChHHHHHH----HHHHHHhCCCC-----EEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHH----HHHHhc
Confidence            3667777777    56677766553     3667889999999999999999999999988876532100    012233


Q ss_pred             cceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccccccccc
Q 009673          221 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV  298 (529)
Q Consensus       221 g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~  298 (529)
                      |.  ++..++.+      +.+.+++++++ ++|+|++++|+||.  ..|+++|+++|+++|+++++|+++...+     .
T Consensus       128 Gi--~v~~vd~~------~~e~l~~al~~-~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~-----~  193 (395)
T PRK05967        128 GV--EVEYYDPE------IGAGIAKLMRP-NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPL-----Y  193 (395)
T ss_pred             Ce--EEEEeCCC------CHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCce-----e
Confidence            44  44444321      35789999987 89999999988886  6799999999999999999999865432     2


Q ss_pred             CCCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673          299 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV  374 (529)
Q Consensus       299 ~~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~  374 (529)
                      ..|++ ++|+++.|.+|++.|..   +|+++.++      ++.+++.....  ..|.. .....| +..++.+  .-+.-
T Consensus       194 ~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~------~~~~~l~~~~~--~~G~~-~~p~da-~l~~rgl--~Tl~l  261 (395)
T PRK05967        194 FRPLDFGVDISIHAATKYPSGHSDILLGTVSANE------KCWPQLLEAHG--TLGLC-AGPDDT-YQILRGL--RTMGI  261 (395)
T ss_pred             cChhHcCCCEEEEecccccCCCCCeeEEEEEcCH------HHHHHHHHHHH--HcCCC-CCHHHH-HHHHcCc--ccHHH
Confidence            35666 79999999999987743   47776665      44444432111  12221 111111 1123322  23567


Q ss_pred             HHHHHHHHHHHHHHHHHhc
Q 009673          375 YQNKVVSNCRALASRLVEL  393 (529)
Q Consensus       375 ~~~~i~~~a~~l~~~L~~~  393 (529)
                      ++++..+|+..+++.|++.
T Consensus       262 R~~~~~~na~~lA~~L~~h  280 (395)
T PRK05967        262 RLEHHRKSALEIARWLEGR  280 (395)
T ss_pred             HHHHHHHHHHHHHHHHHhC
Confidence            7889999999999999883

>PLN02590 probable tyrosine decarboxylase

Probab=99.76  E-value=4.4e-16  Score=167.35  Aligned_cols=312  Identities=16%  Similarity=0.101  Sum_probs=194.3

Q ss_pred             hhHHHHHHHHHHHHHHHcCCCCCCC----ceeeecCChHHHHHHHHHhhcC--------C--CCEEE-EcCCCCCccccc
Q 009673          144 EYIDELETLCQKRALAAFNLDENKW----GVNVQPLSGSPANFEVYTAILK--------P--HDRIM-GLDLPHGGHLSH  208 (529)
Q Consensus       144 ~~~d~lE~~a~~~la~~~g~~~~~~----~~~V~~~sGs~A~~~~l~all~--------p--GD~Vl-~~~~~~~g~~s~  208 (529)
                      +...++|+.+.+|+++++|.+...+    +.-+..++||+||+.++.+.-+        .  .+-|+ +.+-   .|++.
T Consensus       166 Pa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~---aH~Sv  242 (539)
T PLN02590        166 PAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQ---THSSF  242 (539)
T ss_pred             chhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCC---chHHH
Confidence            4567899999999999999986421    1123446777999887765321        0  12233 3332   33332


Q ss_pred             cccccccccccccceE-EEEEcccCC-CCCCCCHHHHHHHhhhc-----CCcEEEEc--CCCCCCCCCHHHHHHHHHHhC
Q 009673          209 GFMTPKRRVSGTSIYF-ESMPYRLDE-STGLVDYDMLEKTAILF-----RPKLIIAG--ASAYPRDFDYPRMRQIADAVG  279 (529)
Q Consensus       209 g~~~~~~~i~~~g~~~-~~v~~~v~~-~~~~iD~d~le~~i~~~-----~pklIi~~--~s~~p~~~d~~~i~~ia~~~g  279 (529)
                           .|.+.+.|.+. .++.+++|. +++.+|+++|+++|.+.     .|-+|+.+  .++.+...|+++|++||++||
T Consensus       243 -----~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g  317 (539)
T PLN02590        243 -----RKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYG  317 (539)
T ss_pred             -----HHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhC
Confidence                 24556666532 244555664 35799999999999653     25566654  344455889999999999999


Q ss_pred             CEEEEecccccccccccccC---CCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHh-------hhccc-----
Q 009673          280 ALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES-------AINNA-----  343 (529)
Q Consensus       280 ~~livD~ah~~Gli~~~~~~---~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~-------~i~~~-----  343 (529)
                      +|++||+|+.........+.   ..++.+|.++.++|||+..|.+ |+++++++.    .+.+       .+...     
T Consensus       318 ~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~----~l~~a~~~~~~YL~~~~~~~~  393 (539)
T PLN02590        318 IWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRY----SLIDALKTNPEYLEFKVSKKD  393 (539)
T ss_pred             CeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHH----HHHHHhhcCHHHhCCcccccc
Confidence            99999998543332222211   2234789999999999988877 999988741    1111       11110     


Q ss_pred             -c--c--CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceEEEccCCCCCc
Q 009673          344 -V--F--PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRPMGID  417 (529)
Q Consensus       344 -~--~--p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~~v~~~~~~i~  417 (529)
                       .  +  ...+.+... ....++.+|+....++|.+++++..+.++++.+.|++ .+|+++.+.. -.++.+.+.+.+.+
T Consensus       394 ~~~d~~d~~i~lsRr~-raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~-l~iVcFr~~~~~~~  471 (539)
T PLN02590        394 TVVNYKDWQISLSRRF-RSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRY-FSLVCFRLAPVDGD  471 (539)
T ss_pred             cCCCccccCCCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCc-eEEEEEEecCCCCC
Confidence             0  0  012233232 3455667788777788999999999999999999987 5899987532 22333333332222


Q ss_pred             H-------HHHHHhHhcCCe-EEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          418 G-------ARVEKILDMASI-TLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       418 ~-------~~~~~~L~~~GI-~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .       ..+.+.|.+.|. .+....+.      +...||+++...   -.+++|++.+.+.|.+...
T Consensus       472 ~~~~~~ln~~l~~~l~~~G~~~vs~t~~~------g~~~lR~~i~n~---~T~~~dv~~~~~~i~~~a~  531 (539)
T PLN02590        472 EDQCNERNRELLAAVNSTGKIFISHTALS------GKFVLRFAVGAP---LTEEKHVTEAWQIIQKHAS  531 (539)
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEeeEEC------CEEEEEEEecCC---CCCHHHHHHHHHHHHHHHH
Confidence            1       234555555554 44332222      234799876322   2458999999999987644

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.76  E-value=1.2e-16  Score=165.99  Aligned_cols=211  Identities=17%  Similarity=0.122  Sum_probs=145.0

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      |++.++++|    ++++++.|.+.     .|.+.||+.|+.+++.++++|||+|+++...|++.+...    ...+...|
T Consensus        62 ~~P~~~~lE----~~la~leg~~~-----av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~----~~~~~~~G  128 (384)
T PRK06434         62 GNPTVQAFE----EKYAVLENAEH-----ALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFF----NKVLKTLG  128 (384)
T ss_pred             CChhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHH----HHHHHhcC
Confidence            678889999    66888999875     366799999999999999999999999877666654211    11222334


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  +++.+++++. ..++       +...++|+|++..++||+  ..|+++|+++|+++|  +++|+++..+.     ..
T Consensus       129 i--~v~fvd~~~~-~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~-----~~  191 (384)
T PRK06434        129 I--HVDYIDTDRL-NSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPY-----NQ  191 (384)
T ss_pred             c--EEEEECCCCh-hhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcc-----cC
Confidence            3  6667666531 1122       222368999999888876  789999999999998  56799975432     23


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      .|++ ++|++++|.||++.|+.   ||+|+++++     ++.+++.....  ..|......-|+  ..+..+  ..+..+
T Consensus       192 ~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~-----~~~~~~~~~~~--~~G~~~~~~~A~--l~~~gL--~tL~~R  260 (384)
T PRK06434        192 NPLDLGADVVIHSATKYISGHSDVVMGVAGTNNK-----SIFNNLVERRK--TLGSNPDPIQAY--LALRGL--KTLGLR  260 (384)
T ss_pred             CchhcCCCEEEeecccccCCCCCceEEEEecCcH-----HHHHHHHHHHH--hcCCCCCHHHHH--HHHhCC--CcHHHH
Confidence            4555 79999999999998865   688888664     56555543210  112211112222  223333  346788


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q 009673          376 QNKVVSNCRALASRLVEL  393 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~~  393 (529)
                      +++..+|+..+.+.|.+.
T Consensus       261 ~~r~~~~a~~~a~~L~~~  278 (384)
T PRK06434        261 MEKHNKNGMELARFLRDS  278 (384)
T ss_pred             HHHHHHHHHHHHHHHHcC
Confidence            899999999999999883

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.75  E-value=1.5e-16  Score=168.01  Aligned_cols=153  Identities=20%  Similarity=0.179  Sum_probs=116.6

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..+.+|    +.+++++|.+.     .+.+.||+.|+.+++.++++|||+|++....|++.+...    ...+...|
T Consensus        67 ~~p~~~~Le----~~lA~l~g~~~-----av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~----~~~l~~~G  133 (436)
T PRK07812         67 MNPTQDVVE----QRIAALEGGVA-----ALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLF----HYTLPKLG  133 (436)
T ss_pred             CCchHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHH----HHHhhcCe
Confidence            455677777    67889999876     256689999999999999999999999987776543110    00111123


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                        ++++.++ +    ..|++++++++++ ++++|++..++||.  ..|+++|.++|+++|+++++|++|..+..     .
T Consensus       134 --i~v~~vd-d----~~d~e~l~~ai~~-~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~-----~  200 (436)
T PRK07812        134 --IEVSFVE-D----PDDLDAWRAAVRP-NTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL-----I  200 (436)
T ss_pred             --EEEEEEC-C----CCCHHHHHHhCCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence              3555543 2    2389999999987 89999998888776  78999999999999999999999876644     2


Q ss_pred             CCCC-cccEEEecccccccCCC
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR  320 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr  320 (529)
                      .++. ++|+++.|+||+++|+.
T Consensus       201 ~pl~~GaDivv~S~tK~lgg~G  222 (436)
T PRK07812        201 RPLEHGADIVVHSATKYLGGHG  222 (436)
T ss_pred             CchhcCCCEEEEecccccCCCC
Confidence            3444 79999999999997664

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=99.75  E-value=6.4e-17  Score=176.70  Aligned_cols=292  Identities=16%  Similarity=0.129  Sum_probs=199.9

Q ss_pred             HHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcc
Q 009673          152 LCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR  230 (529)
Q Consensus       152 ~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~  230 (529)
                      .+++.+++.||++...+     +++|| .+|.++++++++|||+||+...+|-+.+ |       .+.++|+  .++++.
T Consensus       199 eAe~~AA~~fgAd~tyf-----vvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~-h-------aLilsga--~PVYl~  263 (714)
T PRK15400        199 EAEEYIARVFNADRSYM-----VTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLT-H-------LMMMSDV--TPIYFR  263 (714)
T ss_pred             HHHHHHHHHhCCCcEEE-----EeCchHHHHHHHHHHhcCCCCEEEeecccHHHHH-H-------HHHHcCC--eEEEec
Confidence            35588899999998632     36786 8999999999999999999887665432 2       3445665  666654


Q ss_pred             cCC-CC---CCCC-----HHHHHHHhhhc----CCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEeccccccccccc
Q 009673          231 LDE-ST---GLVD-----YDMLEKTAILF----RPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAAS  296 (529)
Q Consensus       231 v~~-~~---~~iD-----~d~le~~i~~~----~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~  296 (529)
                      ... +.   +.|+     .+.|++.+.++    +|+.+++.+|+|-+ ..|++.|.++|+.++  +++|+||+....+.+
T Consensus       264 P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p  341 (714)
T PRK15400        264 PTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSP  341 (714)
T ss_pred             ccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCc
Confidence            321 11   2345     89999998763    34478888888766 789999999998887  789999987654444


Q ss_pred             ccC--CCCC-cc---c--EEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh
Q 009673          297 VVA--DPFK-YC---D--VVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA  367 (529)
Q Consensus       297 ~~~--~~~~-~a---D--iv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~  367 (529)
                      ..+  +++. ++   |  +++.|+||+|++... ++|..+...    + .++++.+..-..+.+|++..+|++.+|...+
T Consensus       342 ~~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~v----d-~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m  416 (714)
T PRK15400        342 IYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDV----N-EETFNEAYMMHTTTSPHYGIVASTETAAAMM  416 (714)
T ss_pred             ccCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCC----C-HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH
Confidence            332  3342 45   5  999999999988766 677665421    1 2345444333345789999999999887776


Q ss_pred             cCchHHHHHHHHHHHHHHHHHHHHh-cC------cEEecCC----------------------------CCCceEEEccC
Q 009673          368 QSPEFKVYQNKVVSNCRALASRLVE-LG------YKLVSGG----------------------------SDNHLVLVDLR  412 (529)
Q Consensus       368 ~~~~~~~~~~~i~~~a~~l~~~L~~-~G------~~v~~~g----------------------------t~~~~~~v~~~  412 (529)
                      .....++..++.++.+..+++.|.+ .+      |.++.+.                            .|.--+++.++
T Consensus       417 ~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tp  496 (714)
T PRK15400        417 KGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTP  496 (714)
T ss_pred             HhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEeC
Confidence            5434567778888888888888877 34      5554211                            01111233332


Q ss_pred             C---------CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          413 P---------MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       413 ~---------~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .         .|+++..+.+.|+++||.+.+..         ...+=+    +.+.|.++++++++.+.|.+.-+
T Consensus       497 gi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d---------~~~iLf----l~s~g~t~~~~~~L~~aL~~f~~  558 (714)
T PRK15400        497 GMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTG---------PYNLLF----LFSIGIDKTKALSLLRALTDFKR  558 (714)
T ss_pred             CCCCCccccccCCCHHHHHHHHHHcCCEEEecC---------CCeEEE----EeCCCCCHHHHHHHHHHHHHHHH
Confidence            2         46778889999999999997641         122222    34457789999999998887633

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=99.75  E-value=8.4e-16  Score=161.28  Aligned_cols=312  Identities=15%  Similarity=0.124  Sum_probs=183.2

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh----c
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----L  189 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al----l  189 (529)
                      -.|+|.+|+...+...+..+   .. + .++...+++    ++++++++.+.     .+...||++|+..++.++    .
T Consensus        48 ~~p~v~~a~~~~~~~~~~~~---~~-~-~~~~~~~la----~~l~~~~~~~~-----v~~~~sGseA~~~al~~ar~~~~  113 (389)
T PRK01278         48 AHPHLVEALKEQAEKLWHVS---NL-Y-RIPEQERLA----ERLVENSFADK-----VFFTNSGAEAVECAIKTARRYHY  113 (389)
T ss_pred             CCHHHHHHHHHHHHhcCccc---cc-c-CChHHHHHH----HHHHhhCCCCE-----EEEcCCcHHHHHHHHHHHHHHHH
Confidence            47888988887775322111   11 1 123233333    66777765432     245688999999988766    5


Q ss_pred             CCCC----EEEEcCCCCCccccccccccccccccccceEEEEEc-ccCCCCC----CCCHHHHHHHhhhcCCcEEEEcCC
Q 009673          190 KPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDESTG----LVDYDMLEKTAILFRPKLIIAGAS  260 (529)
Q Consensus       190 ~pGD----~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~-~v~~~~~----~iD~d~le~~i~~~~pklIi~~~s  260 (529)
                      ++||    +|++.++.|.|.....       ....+.......+ +.. .++    ..|++++++.+++ ++++|+++..
T Consensus       114 ~~G~~~r~~vi~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~l~~-~~~avivep~  184 (389)
T PRK01278        114 GKGHPERYRIITFEGAFHGRTLAT-------IAAGGQEKYLEGFGPLV-PGFDQVPFGDIEALKAAITP-NTAAILIEPI  184 (389)
T ss_pred             hcCCCCCCEEEEECCCcCCCcHHH-------HhccCChhhcccCCCCC-CCceEeCCCCHHHHHHhhCC-CeEEEEEecc
Confidence            6787    8999987664432111       1111110000000 111 111    2689999999977 8999999865


Q ss_pred             CCCC------CCCHHHHHHHHHHhCCEEEEeccccccccccccc-CC-CCC-cccEEEecccccc-cCCCCeEEEeeCCC
Q 009673          261 AYPR------DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-AD-PFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDP  330 (529)
Q Consensus       261 ~~p~------~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~-~~~-~aDiv~~S~hK~l-~GprgG~i~~~~~~  330 (529)
                      ++++      ..++++|+++|++||+++|+|++|. |+...+.. .. ... ..|++  +++|.+ +|+|.|++++++  
T Consensus       185 ~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~--  259 (389)
T PRK01278        185 QGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC-GMGRTGKLFAHEWAGVTPDIM--AVAKGIGGGFPLGACLATE--  259 (389)
T ss_pred             cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCcceeecccCCCCCEE--EEehhccCCcceEEEEEcH--
Confidence            5443      2368999999999999999999964 54332211 10 011 24654  567998 568899999987  


Q ss_pred             cchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcE-Eec--CCCCCc
Q 009673          331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYK-LVS--GGSDNH  405 (529)
Q Consensus       331 ~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~-v~~--~gt~~~  405 (529)
                          ++.+.+.........+++.. ..++..++++.+...   ++.+++.++.+.+.+.|++.  ... ++.  .+ ...
T Consensus       260 ----~~~~~~~~~~~~~t~~~~~~-~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g-~G~  330 (389)
T PRK01278        260 ----EAAKGMTPGTHGSTYGGNPL-AMAVGNAVLDVILAP---GFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRG-KGL  330 (389)
T ss_pred             ----HHHhccCCCCCCCCCCccHH-HHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHhhCCCceeeEec-ccE
Confidence                66666654333333344333 333333467665432   33455556666666666542  111 221  11 123


Q ss_pred             eEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          406 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       406 ~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ++++.+..   +..++.+.|.+.||.+    .|+     ..+.|||+.+..    +++++++++++.|.+++.
T Consensus       331 ~~~i~~~~---~~~~~~~~l~~~GV~~----~p~-----~~~~lR~~p~~~----~~~~~i~~~l~~l~~~l~  387 (389)
T PRK01278        331 LLGLKCVV---PNRDLVQALRDEGLLT----VGA-----GDNVVRLLPPLI----ITEEEIDEALERLERAAE  387 (389)
T ss_pred             EEEEEEec---CHHHHHHHHHHCCeEE----eec-----CCCEEEEeCCcc----cCHHHHHHHHHHHHHHHH
Confidence            33444421   4566767776779998    443     246899986532    458999999999988764

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.75  E-value=3.6e-16  Score=165.33  Aligned_cols=152  Identities=20%  Similarity=0.216  Sum_probs=118.8

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++.++++|    +.++++.|.++     .|.+.||++|+.+++.+++++||+|++++.+|++......    ..+...|
T Consensus        62 ~~p~~~~le----~~lA~l~g~~~-----av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~----~~l~~~G  128 (433)
T PRK08134         62 SNPTVAVLE----ERVAALEGGVG-----AIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLH----YTLRRFG  128 (433)
T ss_pred             cChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHH----HHHhhCC
Confidence            456677777    67889999876     2557999999999999999999999999988865422100    0111234


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                        .+++.++++      |++++++.+++ +||+|++..++||+  ..|+++|+++|+++|+++++|++|..+..     .
T Consensus       129 --i~v~~vd~~------d~~~l~~~i~~-~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~-----~  194 (433)
T PRK08134        129 --IETTFVKPG------DIDGWRAAIRP-NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYL-----L  194 (433)
T ss_pred             --eEEEEECCC------CHHHHHHhcCC-CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence              366665542      79999999988 89999998888885  78999999999999999999999887754     2


Q ss_pred             CCCC-cccEEEecccccccCCC
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR  320 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr  320 (529)
                      .|+. ++|++++|.||++.|+.
T Consensus       195 ~pl~~GaD~vv~S~tK~l~g~g  216 (433)
T PRK08134        195 RPFEHGADLVYHSATKFLGGHG  216 (433)
T ss_pred             CchhcCCCEEEeccccccCCCC
Confidence            3444 79999999999997665

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.75  E-value=2.5e-16  Score=166.30  Aligned_cols=160  Identities=21%  Similarity=0.194  Sum_probs=118.9

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..+++|    +.++++.|.+.     .+.+.||++|+.+++.++++|||+|++.++.|++.+...    ...+...|
T Consensus        56 ~~pt~~~Le----~~lA~l~g~~~-----~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~----~~~l~~~g  122 (425)
T PRK06084         56 MNPTNDVLE----QRVAALEGGVG-----ALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLL----AHTLPRIG  122 (425)
T ss_pred             CCchHHHHH----HHHHHHhCCCc-----eeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHH----HHhcccce
Confidence            345566777    67888998764     345689999999999999999999999988776543210    00111123


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                        .++..++      ..|++++++.+++ ++++|++++++||+  ..|+++|.++|+++|++||+|++|..+..     .
T Consensus       123 --i~v~~~d------~~d~e~le~ai~~-~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~-----~  188 (425)
T PRK06084        123 --IETRFAA------HDDIAALEALIDE-RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVL-----C  188 (425)
T ss_pred             --eEEEEEC------CCCHHHHHHHhcc-CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence              2433432      2489999999987 89999999888886  77999999999999999999999876543     2


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeC
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK  328 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~  328 (529)
                      .|++ ++|++++|+||++.|+.   ||+++.+.
T Consensus       189 ~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~  221 (425)
T PRK06084        189 RPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSG  221 (425)
T ss_pred             ChhhcCCCEEEECchhcccccccceeEEEEeCC
Confidence            3444 69999999999997654   46666543

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.74  E-value=1.5e-16  Score=168.17  Aligned_cols=160  Identities=21%  Similarity=0.173  Sum_probs=120.4

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..+.+|    +.++++.|.+.     .+.++||+.|+..++.++++|||+|+++++.|++.+...    ...+...|
T Consensus        62 ~~p~~~~Le----~~lA~leg~~~-----al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~----~~~~~~~G  128 (431)
T PRK08248         62 MNPTTDVFE----KRIAALEGGIG-----ALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLF----AHTLPKLG  128 (431)
T ss_pred             CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHH----HHHHHhCC
Confidence            455667777    67888999764     356789999999999999999999999998876543211    01122234


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                        .+++.++.      .|++++++++++ ++++|++.+++||+  ..|+++|.++|+++|+++|+|+++..+..     .
T Consensus       129 --v~v~~vd~------~d~e~l~~ai~~-~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~-----~  194 (431)
T PRK08248        129 --ITVKFVDP------SDPENFEAAITD-KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYL-----L  194 (431)
T ss_pred             --EEEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCcccc-----C
Confidence              36666543      489999999987 89999999888886  78999999999999999999998764422     2


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeC
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK  328 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~  328 (529)
                      .|++ ++|+++.|+||+++|+.   ||+++.+.
T Consensus       195 ~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~  227 (431)
T PRK08248        195 RPIEHGADIVVHSATKFIGGHGTSIGGVIVDSG  227 (431)
T ss_pred             ChhHcCCCEEEEcCccccCCCCCceEEEEEeCC
Confidence            3344 79999999999997764   25555443

>PLN02263 serine decarboxylase

Probab=99.74  E-value=1.5e-15  Score=159.43  Aligned_cols=289  Identities=14%  Similarity=0.084  Sum_probs=190.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCC-CCCceeeecCChHHHHHHHHHhhcC--CCCEEEEcCCCCCccccccccccccccccccc
Q 009673          146 IDELETLCQKRALAAFNLDE-NKWGVNVQPLSGSPANFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI  222 (529)
Q Consensus       146 ~d~lE~~a~~~la~~~g~~~-~~~~~~V~~~sGs~A~~~~l~all~--pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~  222 (529)
                      ..++|..+.+|+++++|.+. +.|+  +..++||++|+.++.+.-+  +...|++++-.|   ++.     .|.+.+.|.
T Consensus       131 s~~~E~~Vi~wla~L~g~p~~~~~G--~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH---~Sv-----~KAa~llgi  200 (470)
T PLN02263        131 SRQFEVGVLDWFARLWEIEKNEYWG--YITNCGTEGNLHGILVGREVFPDGILYASRESH---YSV-----FKAARMYRM  200 (470)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCeE--EEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCcc---HHH-----HHHHHhcCC
Confidence            56899999999999999986 3465  3346677999988877632  334555555433   322     245667776


Q ss_pred             eEEEEEcccCCCCCCCCHHHHHHHhhhcC--CcEEEEc--CCCCCCCCCHHHHHHHHHHhCC-----EEEEecccccccc
Q 009673          223 YFESMPYRLDESTGLVDYDMLEKTAILFR--PKLIIAG--ASAYPRDFDYPRMRQIADAVGA-----LLMMDMAHISGLV  293 (529)
Q Consensus       223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~--pklIi~~--~s~~p~~~d~~~i~~ia~~~g~-----~livD~ah~~Gli  293 (529)
                        +.+.++++ +++.+|+++|++.|.+.+  |-+|+.+  ....+...|+++|.++|+++|+     |+++|+|. .|.+
T Consensus       201 --~~~~Vp~d-~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~-GG~~  276 (470)
T PLN02263        201 --ECVKVDTL-VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGAL-FGLM  276 (470)
T ss_pred             --cceEeccC-CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccc-hhhH
Confidence              45556666 578999999999997643  5555554  3344448899999999999997     99999984 4543


Q ss_pred             c-ccccCCCCC---cccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcc------cccCCCCCCChHHHHHHHHH
Q 009673          294 A-ASVVADPFK---YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN------AVFPGLQGGPHNHTIGGLAV  362 (529)
Q Consensus       294 ~-~~~~~~~~~---~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~------~~~p~~~g~p~~~~iaala~  362 (529)
                      . .-....++.   .+|.++.++|||+..|-+ |++++++.      ..+.+..      ...+.+.|+.+....+.++.
T Consensus       277 lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~------~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~  350 (470)
T PLN02263        277 MPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRME------HINVLSSNVEYLASRDATIMGSRNGHAPIFLWY  350 (470)
T ss_pred             hhhcccccccCCCcCccEEEECCccccCCCcCEEEEEEehh------hHhhhccChHhhCCCCCCcCCCCCcHHHHHHHH
Confidence            2 111111233   489999999999988888 99999873      2222111      11234556655555667777


Q ss_pred             HHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCC
Q 009673          363 CLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKS  442 (529)
Q Consensus       363 al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~  442 (529)
                      .|+.....+|.++.++..++++++.+.|++.|+.++... ...  ++.++..  + +..    ...|..++.        
T Consensus       351 ~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p-~s~--~V~f~~p--~-~~~----~~~gW~L~~--------  412 (470)
T PLN02263        351 TLNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISAMLNE-LSS--TVVFERP--K-DEE----FVRRWQLAC--------  412 (470)
T ss_pred             HHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCC-Cce--EEEEecC--c-hHH----hhcceEEcc--------
Confidence            888877788999999999999999999999898877532 222  2323321  1 111    134665542        


Q ss_pred             CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          443 ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       443 ~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                        .+..+||.+..    ..+.+.++++.+-|.+...
T Consensus       413 --~~~~~Hivvmp----hv~~~~id~fi~DL~~~~~  442 (470)
T PLN02263        413 --QGNIAHVVVMP----SVTIEKLDYFLKELVEKRS  442 (470)
T ss_pred             --CCCcEEEEEcC----CCCHHHHHHHHHHHHHHHh
Confidence              12357876532    1345777777776665544

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.74  E-value=2.8e-16  Score=166.24  Aligned_cols=156  Identities=22%  Similarity=0.228  Sum_probs=119.1

Q ss_pred             hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccce
Q 009673          144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY  223 (529)
Q Consensus       144 ~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~  223 (529)
                      +....+|    +.++++.|.+.     .+.+.||++|+.+++.++++|||+|++..+.|++......    ..+...|. 
T Consensus        63 p~~~~le----~~lA~l~g~~~-----al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~----~~~~~~G~-  128 (427)
T PRK05994         63 PTNAVLE----ERVAALEGGTA-----ALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFG----HAFKSFGW-  128 (427)
T ss_pred             ccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHH----HHHHhcCc-
Confidence            4456666    67888999875     3556999999999999999999999999988876532100    01122343 


Q ss_pred             EEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCC
Q 009673          224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP  301 (529)
Q Consensus       224 ~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~  301 (529)
                       +++.++.      .|++++++.+++ ++++|++.+++||+  ..|+++|.++|+++|+++++|++|..+..     ..|
T Consensus       129 -~v~~vd~------~d~~~l~~ai~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~-----~~p  195 (427)
T PRK05994        129 -QVRWADA------DDPASFERAITP-RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYL-----IRP  195 (427)
T ss_pred             -EEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCcccccc-----CCc
Confidence             5555442      378999999987 89999999888886  78999999999999999999999876543     234


Q ss_pred             CC-cccEEEecccccccCCCC---eEEEe
Q 009673          302 FK-YCDVVTTTTHKSLRGPRG---GMIFF  326 (529)
Q Consensus       302 ~~-~aDiv~~S~hK~l~Gprg---G~i~~  326 (529)
                      ++ ++|+++.|+||++.|+.+   |+++.
T Consensus       196 l~~gaDivv~S~tK~lgg~~~~~gG~v~~  224 (427)
T PRK05994        196 IEHGADIVVHSLTKFLGGHGNSMGGIIVD  224 (427)
T ss_pred             cccCCcEEEEcCccccCCCCCcEEEEEEe
Confidence            54 799999999999977653   55553

>PRK07049 methionine gamma-lyase; Validated

Probab=99.74  E-value=2.8e-16  Score=166.23  Aligned_cols=217  Identities=18%  Similarity=0.143  Sum_probs=146.5

Q ss_pred             chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673          143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI  222 (529)
Q Consensus       143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~  222 (529)
                      ++....+|    +.++++.|.+.     .+.++||+.|+.+++.++++|||+|++.+|.|+++.....    ......|.
T Consensus        82 ~Pt~~~Le----~~lA~leg~~~-----~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~----~~l~~~Gi  148 (427)
T PRK07049         82 HPNSEIVE----DRLAVYEGAES-----AALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLA----KTFRNFGV  148 (427)
T ss_pred             CcCHHHHH----HHHHHHhCCCc-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHH----HHHHhcCc
Confidence            34456666    67888888764     3556889999999999999999999999998876532100    00112343


Q ss_pred             eEEEEEcccCCCCCCCCHHHHHHHhhh----cCCcEEEEcCCCCCC--CCCHHHHHHHHHH------hCCEEEEeccccc
Q 009673          223 YFESMPYRLDESTGLVDYDMLEKTAIL----FRPKLIIAGASAYPR--DFDYPRMRQIADA------VGALLMMDMAHIS  290 (529)
Q Consensus       223 ~~~~v~~~v~~~~~~iD~d~le~~i~~----~~pklIi~~~s~~p~--~~d~~~i~~ia~~------~g~~livD~ah~~  290 (529)
                        +++.++ +    ..|++++++.+.+    .++|+|++++|+||+  ..|+++|.++++.      +++++++|++...
T Consensus       149 --~~v~~~-~----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~  221 (427)
T PRK07049        149 --GAVGFA-D----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLG  221 (427)
T ss_pred             --EEEEEe-C----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccc
Confidence              444543 1    2567788766642    378999999999998  7899999999988      8999999998432


Q ss_pred             ccccccccCCCCC-cccEEEecccccccC---CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHH
Q 009673          291 GLVAASVVADPFK-YCDVVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH  366 (529)
Q Consensus       291 Gli~~~~~~~~~~-~aDiv~~S~hK~l~G---prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~  366 (529)
                      . .    ...|+. ++|+++.|++|++.|   .|+|+++.++      ++.+++.....+. .++........   +++.
T Consensus       222 ~-~----~~~pl~~g~divv~S~SK~~gG~~glr~G~vv~~~------~l~~~l~~~~~~~-g~~ls~~~a~l---~~r~  286 (427)
T PRK07049        222 P-V----FQKPLEHGADLSVYSLTKYVGGHSDLVAGAVLGRK------ALIRQVRALRSAI-GTQLDPHSCWM---LGRS  286 (427)
T ss_pred             c-c----cCCccccCCCEEEEcCceeecCCCCcEEEEEECCH------HHHHHHHHHHHhc-CCCCCHHHHHH---HHcC
Confidence            2 2    123444 689999999999864   5789999876      6766665432221 11111111111   2222


Q ss_pred             hcCchHHHHHHHHHHHHHHHHHHHHhc-CcE
Q 009673          367 AQSPEFKVYQNKVVSNCRALASRLVEL-GYK  396 (529)
Q Consensus       367 ~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~  396 (529)
                      +  ..+..++++..+|++.+.+.|++. ++.
T Consensus       287 L--~tl~~R~~~~~~~a~~la~~L~~~p~V~  315 (427)
T PRK07049        287 L--ETLVLRMERANRNARAVAEFLRDHPKVE  315 (427)
T ss_pred             C--ChHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence            2  235667788899999999999883 543

>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]

Probab=99.74  E-value=1.6e-16  Score=151.94  Aligned_cols=309  Identities=19%  Similarity=0.227  Sum_probs=205.9

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc-CCC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-KPH  192 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all-~pG  192 (529)
                      ++.+.+++|.....        |...|+-.+...+||    ++.+++||-+..     +.++||+.+|+++++.-+ +||
T Consensus        34 PTdeMr~am~eA~v--------gDdVyGeD~tt~rLE----~~vA~l~GKEAg-----LFv~SGTmgNllaIm~Hc~~rg   96 (384)
T KOG1368|consen   34 PTDEMRRAMAEASV--------GDDVYGEDPTTNRLE----QRVAELFGKEAG-----LFVPSGTMGNLLAIMVHCHQRG   96 (384)
T ss_pred             ChHHHHHHHhhccc--------CcccccCCccHHHHH----HHHHHHhCccce-----eeecccccccHHHHHHHhcCCC
Confidence            45677888765432        233455555567788    678899999874     445999999998888754 599


Q ss_pred             CEEEEcCCCCCcccccccccccccc-ccccceEEEEEcccCCCCCCCCHHHHHHHhhhcC-------CcEEEEcCCCC--
Q 009673          193 DRIMGLDLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-------PKLIIAGASAY--  262 (529)
Q Consensus       193 D~Vl~~~~~~~g~~s~g~~~~~~~i-~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~-------pklIi~~~s~~--  262 (529)
                      .+|++-+..|-    |-|.  ...+ .+.|.  .+.++.. ++++.+|+++||..+...+       +++|++....+  
T Consensus        97 ~eii~gd~~HI----~~~E--~gg~s~l~gv--~~~tv~~-e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~  167 (384)
T KOG1368|consen   97 SEIIVGDRAHI----HRYE--QGGISQLAGV--HVRTVKN-ENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNC  167 (384)
T ss_pred             ceEEeccchhe----eehh--ccChhhhccc--eeEeeee-CCCCeeeHHHHHHhhcCCCCCccCCCceEEEeecccccc
Confidence            99998876542    1111  1122 23343  4444433 2568999999999997432       58898875543  


Q ss_pred             CC-CCC---HHHHHHHHHHhCCEEEEecccccccc-cccccCCCC----CcccEEEecccccccCCCCeEEEeeCCCcch
Q 009673          263 PR-DFD---YPRMRQIADAVGALLMMDMAHISGLV-AASVVADPF----KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLG  333 (529)
Q Consensus       263 p~-~~d---~~~i~~ia~~~g~~livD~ah~~Gli-~~~~~~~~~----~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~  333 (529)
                      ++ ..|   ++++.++|++||+.|++|+|...... +.++   |+    ..+|-|...++|.|..|-|.+|++++     
T Consensus       168 Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV---~vk~i~~~fDSVsiCLSKglgAPVGSViVG~k-----  239 (384)
T KOG1368|consen  168 GGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGV---PVKKICSAFDSVSICLSKGLGAPVGSVIVGSK-----  239 (384)
T ss_pred             CceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCC---CHHHHHHhhhhhhhhhhccCCCCcccEEEccH-----
Confidence            43 445   45677889999999999988654322 1121   22    25788999999999999999999999     


Q ss_pred             hHHHhhh---cccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC-cEEecCCCCCceEEE
Q 009673          334 VELESAI---NNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG-YKLVSGGSDNHLVLV  409 (529)
Q Consensus       334 ~~l~~~i---~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G-~~v~~~gt~~~~~~v  409 (529)
                       +++++.   ++..    .||.-...+.|.+ +|--+ ...++ ..++..++++.|++.++..+ +++-.+..+++++.+
T Consensus       240 -~FI~kA~~~RKal----GGGmRQsGvLaaa-aLval-~~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~  311 (384)
T KOG1368|consen  240 -DFIDKARHFRKAL----GGGMRQSGVLAAA-ALVAL-DENVP-LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNM  311 (384)
T ss_pred             -HHHHHHHHHHHHh----cCchhHHHHHHHH-HHHHh-hcchH-HHHHHHHHHHHHHHHhccccceeeecchhhcceeee
Confidence             677654   3332    2222222222211 22211 23344 45667788899999998865 777666556777766


Q ss_pred             ccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          410 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       410 ~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      .+...+++.+++.+.|++.||.+    ++|+     ...+||.+++    ..+.++++.+...+.+.+
T Consensus       312 ~l~q~~~~~~~l~~~~~k~gi~l----m~~~-----s~r~Rivlh~----Qvt~~~ve~~~~~~~k~~  366 (384)
T KOG1368|consen  312 VLCQARLTAEELCKFLEKNGILL----MGGA-----SRRIRIVLHH----QVTDEDVEYVKSVLSKKF  366 (384)
T ss_pred             ecccccCCHHHHHHHHHHCCeEE----eecc-----ccceEEEEEE----ecCHHHHHHHHHHHHHHH
Confidence            66666788999999999999998    4443     3569998764    356899999888885433

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=99.74  E-value=1.1e-15  Score=160.92  Aligned_cols=307  Identities=13%  Similarity=0.114  Sum_probs=184.7

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---  189 (529)
                      .-.|.|.+|+...+. ++....   +.+ .++...+++    ++++++++.+.     .+..+||++|+..++....   
T Consensus        56 h~~p~v~~ai~~~~~-~~~~~~---~~~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGseA~e~Alk~a~~~~  121 (396)
T PRK04073         56 HRHPKIIQALKDQAD-KVTLTS---RAF-HSDQLGPWY----EKVAKLTGKDM-----VLPMNTGAEAVETAIKAARRWA  121 (396)
T ss_pred             CCCHHHHHHHHHHHh-hccccc---ccc-CCHHHHHHH----HHHHhcCCCCe-----EEEcCChHHHHHHHHHHHHHHh
Confidence            347888888887764 332211   111 122222333    66777776542     3556899999998887652   


Q ss_pred             ------CCC-CEEEEcCCCC-Cccccccccccccccccccce-----EE-----EEEcccCCCCCCCCHHHHHHHhhhcC
Q 009673          190 ------KPH-DRIMGLDLPH-GGHLSHGFMTPKRRVSGTSIY-----FE-----SMPYRLDESTGLVDYDMLEKTAILFR  251 (529)
Q Consensus       190 ------~pG-D~Vl~~~~~~-~g~~s~g~~~~~~~i~~~g~~-----~~-----~v~~~v~~~~~~iD~d~le~~i~~~~  251 (529)
                            ++| ++|+..+-.+ |.+..        .++..+..     +.     +..++      ..|++++++.+.+ +
T Consensus       122 ~~~~g~~~~r~~ii~~~~~~HG~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~i~~-~  186 (396)
T PRK04073        122 YDVKGVEPNKAEIIACEGNFHGRTMA--------AVSLSSEEEYKRGFGPMLPGIKKIP------YGDLEALKAAITP-N  186 (396)
T ss_pred             hhccCCCCCCCEEEEECCCcCCCCHH--------HHhhcCCcccccCCCCCCCCceEeC------CCCHHHHHHhccc-C
Confidence                  144 6788776543 32211        11111100     00     11111      2278999998876 7


Q ss_pred             CcEEEEcCCCCCC--CCC----HHHHHHHHHHhCCEEEEecccccccccccc-cC-CCCC-cccEEEecccccccC--CC
Q 009673          252 PKLIIAGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDVVTTTTHKSLRG--PR  320 (529)
Q Consensus       252 pklIi~~~s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~-~~~~-~aDiv~~S~hK~l~G--pr  320 (529)
                      +++|+++.+.+++  ..+    +++|.++|++||+++|+|++|. |+...+. .. .... ..|+++  ++|.+++  +|
T Consensus       187 ~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~~~~~~~~~~pdi~~--~sK~lg~gg~~  263 (396)
T PRK04073        187 TAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT-GLGRTGKLFACDWDNVTPDMYI--LGKALGGGVFP  263 (396)
T ss_pred             eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-CCCcCcHHHHhhhcCCCCCEEE--ecccccCCCCc
Confidence            8999998776654  333    8999999999999999999965 4432221 11 0111 357776  4699843  68


Q ss_pred             CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC
Q 009673          321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG  400 (529)
Q Consensus       321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~  400 (529)
                      .|++++++      ++.+.+.........+++.....+++ ++|+.+...+   +.++..++.++|.+.|++.+...+..
T Consensus       264 ig~~~~~~------~i~~~~~~~~~~~t~~~~~~~~aaa~-aaL~~~~~~~---l~~~~~~~~~~l~~~L~~l~~~~i~~  333 (396)
T PRK04073        264 ISCVAANR------DILGVFTPGSHGSTFGGNPLACAVSI-AALEVLEEEK---LPERSLELGEYFKEQLKEIDNPMIKE  333 (396)
T ss_pred             ceEEEEcH------HHHhhhcCCCCCCCCCCCHHHHHHHH-HHHHHHHhcC---HHHHHHHHHHHHHHHHHhhcCCcccc
Confidence            89999987      67776654332333444444444443 4676554333   34666677888889888754322221


Q ss_pred             -CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          401 -GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       401 -gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                       .....++.+++..   +...+.+.|.++||.+...         .++.|||+.+..    .+++|++++++.|++++
T Consensus       334 ~~~~g~~~~~~~~~---~~~~~~~~l~~~Gv~~~~~---------~~~~iRi~p~l~----~t~e~i~~~~~~l~~~l  395 (396)
T PRK04073        334 VRGRGLFIGVELNE---PARPYCEALKEEGLLCKET---------HETVIRFAPPLV----ITKEELDWAFEKIKAVL  395 (396)
T ss_pred             eecceEEEEEEecc---hHHHHHHHHHHCCeEEecC---------CCCEEEEECCcc----cCHHHHHHHHHHHHHHh
Confidence             0123445555532   3566777788899998421         246899987644    45899999999998765

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.74  E-value=4.7e-16  Score=164.38  Aligned_cols=160  Identities=21%  Similarity=0.176  Sum_probs=120.4

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..+++|    +.+++++|.+.     .+.++||+.|+..++.++++|||+|++.++.|++.+...    ...+...|
T Consensus        55 ~~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~----~~~~~~~G  121 (418)
T TIGR01326        55 MNPTTDVLE----QRIAALEGGVA-----ALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLF----KHTLKRLG  121 (418)
T ss_pred             CChhHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHH----HHHHHHcC
Confidence            345566666    77889999754     366789999999999999999999999998876543211    01122334


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  +++.++.      .|++++++.+++ ++++|++..++||+  ..|+++|+++|+++|+++|+|+++..+..     .
T Consensus       122 ~--~v~~v~~------~d~~~l~~~l~~-~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~-----~  187 (418)
T TIGR01326       122 I--EVRFVDP------DDPEEFEKAIDE-NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYL-----C  187 (418)
T ss_pred             c--EEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhc-----C
Confidence            3  5555542      289999999987 89999999888886  67999999999999999999999865532     2


Q ss_pred             CCCC-cccEEEecccccccC--CCCeEEEeeC
Q 009673          300 DPFK-YCDVVTTTTHKSLRG--PRGGMIFFKK  328 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~G--prgG~i~~~~  328 (529)
                      .++. ++|++++|+||++.|  .+.|++++++
T Consensus       188 ~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~  219 (418)
T TIGR01326       188 RPIDHGADIVVHSATKYIGGHGTAIGGVIVDG  219 (418)
T ss_pred             CchhcCCeEEEECccccccCCccceEEEEEec
Confidence            3444 689999999999854  5557666654

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=99.73  E-value=9.8e-16  Score=153.76  Aligned_cols=298  Identities=22%  Similarity=0.217  Sum_probs=200.9

Q ss_pred             HHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh----cCCC----CEEEEcCCCCCccccccccccccccccccceEE
Q 009673          154 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----LKPH----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE  225 (529)
Q Consensus       154 ~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al----l~pG----D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~  225 (529)
                      ++|+++..|.+.    +.+|+.+|+++-++-++++    ...|    +.||+++-.||-+.          .+++-++++
T Consensus       115 q~~L~~ITG~Da----vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNP----------ASAam~G~~  180 (496)
T COG1003         115 QEWLKEITGMDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNP----------ASAAMAGFK  180 (496)
T ss_pred             HHHHHHhcCCce----eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCCh----------hhHhhcCce
Confidence            489999999997    7899999997666544443    2233    58999998777653          223333468


Q ss_pred             EEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC
Q 009673          226 SMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK  303 (529)
Q Consensus       226 ~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~  303 (529)
                      ++.++.+ ++|.+|+|+|++++.+ ++.++.+++||.-+  ..++.+|++|.+++|..|..|+|..-+++..   ..|-+
T Consensus       181 VV~V~~~-~~G~VDlddLk~k~~~-~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~---~rPGd  255 (496)
T COG1003         181 VVVVKCD-ENGNVDLDDLRAKAED-NLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGL---ARPGD  255 (496)
T ss_pred             EEEEecC-CCCCccHHHHHHHhcc-ceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhcc---ccccc
Confidence            8888887 6799999999999987 88889998888776  4589999999999999999999865554421   23333


Q ss_pred             -cccEEEecccccccCCCC------eEEEeeCCCc---ch---h-HHHh-hhc--c----cccCCCCCCChHHHHHHHHH
Q 009673          304 -YCDVVTTTTHKSLRGPRG------GMIFFKKDPV---LG---V-ELES-AIN--N----AVFPGLQGGPHNHTIGGLAV  362 (529)
Q Consensus       304 -~aDiv~~S~hK~l~Gprg------G~i~~~~~~~---~~---~-~l~~-~i~--~----~~~p~~~g~p~~~~iaala~  362 (529)
                       ++||+-..+||+|+.|.|      |-|.+++...   ..   + +..+ ..+  .    .+....+|+..+.   ..+.
T Consensus       256 ~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il---~~a~  332 (496)
T COG1003         256 MGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASIL---PIAW  332 (496)
T ss_pred             cccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchHH---HHHH
Confidence             789999999999966655      4455544210   00   0 0000 000  0    0011113332222   2222


Q ss_pred             H-HHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC--CCceEEEccC----CCCCcHHHHHHhHhcCCeEEcCC
Q 009673          363 C-LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS--DNHLVLVDLR----PMGIDGARVEKILDMASITLNKN  435 (529)
Q Consensus       363 a-l~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt--~~~~~~v~~~----~~~i~~~~~~~~L~~~GI~v~~~  435 (529)
                      + +..+..+++++..+..+-|++++.++|+. .+++...+.  ..|-+++|.+    ..|++..++.++|.++|+.....
T Consensus       333 ~YI~~mG~~GL~~ase~AvLNANYia~rL~~-~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~  411 (496)
T COG1003         333 AYIRMMGADGLKQASEVAVLNANYIARRLKG-YYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTM  411 (496)
T ss_pred             HHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh-cCccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCcc
Confidence            2 33444556777888889999999999986 566654333  5688888887    45788899999999999986544


Q ss_pred             CCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHH
Q 009673          436 SVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLE  482 (529)
Q Consensus       436 ~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~  482 (529)
                      +.|-    ..++.+=|--    |..-+++++++.++++..+...+.+
T Consensus       412 ~FPl----iV~~tLMIEP----TEsEsk~eLDrf~dami~I~~Ea~~  450 (496)
T COG1003         412 YFPL----IVAGTLMIEP----TESESKEELDRFIDAMIAIREEADA  450 (496)
T ss_pred             cCcc----ccccceeecC----CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            4442    1344444421    2235689999999999888776643

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=99.73  E-value=1.1e-15  Score=157.31  Aligned_cols=334  Identities=17%  Similarity=0.184  Sum_probs=216.2

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC-C
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-P  191 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~-p  191 (529)
                      -++++.++||..           |...|+|.+.+..||    +.++++||.+.     -+.+++|..++..++..+++ |
T Consensus        54 apS~~m~aAM~~-----------GDD~Y~gdpSv~~Le----e~vael~G~E~-----alpthqGRgaE~Il~~~~~~~~  113 (467)
T TIGR02617        54 AVTQSMQAAMMR-----------GDEAYSGSRSYYALA----ESVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKKR  113 (467)
T ss_pred             CCCHHHHHHHHc-----------CCcccccCchHHHHH----HHHHHHhCCce-----EEECCCCchHHHHHHHhhcccc
Confidence            478888888863           233467777788888    66788999986     25568999999999999988 8


Q ss_pred             CCEEEEcCC----CCCccccccccccccccccccceEEEEEcc--------cC-CCCCCCCHHHHHHHhhhcC---CcEE
Q 009673          192 HDRIMGLDL----PHGGHLSHGFMTPKRRVSGTSIYFESMPYR--------LD-ESTGLVDYDMLEKTAILFR---PKLI  255 (529)
Q Consensus       192 GD~Vl~~~~----~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~--------v~-~~~~~iD~d~le~~i~~~~---pklI  255 (529)
                      ||++.+-..    .|..|+..+    ...+...|.  .++.+.        ++ +.+|.+|+++|++.|++..   .-.+
T Consensus       114 g~e~g~~~~~~~v~hn~~fett----~g~a~l~G~--~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v  187 (467)
T TIGR02617       114 EQEKGLDRSKMVAFSNYFFDTT----QGHSQINGC--TARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYI  187 (467)
T ss_pred             cccccccccccccceEEEEecc----hHHHHHcCc--eeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceee
Confidence            998885443    233222211    112334554  333321        11 1247999999999998632   2222


Q ss_pred             EEc---CCCCCCCC---CHHHHHHHHHHhCCEEEEecccccc-c--------ccccccCC-----CCCcccEEEeccccc
Q 009673          256 IAG---ASAYPRDF---DYPRMRQIADAVGALLMMDMAHISG-L--------VAASVVAD-----PFKYCDVVTTTTHKS  315 (529)
Q Consensus       256 i~~---~s~~p~~~---d~~~i~~ia~~~g~~livD~ah~~G-l--------i~~~~~~~-----~~~~aDiv~~S~hK~  315 (529)
                      ...   +...+...   ++++++++|++||+.++.|+|-.+. .        .+.+..+.     -+.++|.++.|++|.
T Consensus       188 ~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKg  267 (467)
T TIGR02617       188 VATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKD  267 (467)
T ss_pred             eeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCC
Confidence            222   22223333   5778889999999999999876543 2        12222111     124799999999999


Q ss_pred             ccCCCCeEEEeeCCCcchhHHHhhhccc-----ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 009673          316 LRGPRGGMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL  390 (529)
Q Consensus       316 l~GprgG~i~~~~~~~~~~~l~~~i~~~-----~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L  390 (529)
                      +..|-||+++++++.  +.++.++.+..     -|+ ++||.....+.|+++.|.+...   .+|.++.....++|.+.|
T Consensus       268 lgApvGg~Lag~d~~--~~~l~~~~~~~~i~~EGf~-tYGGlagrd~ea~a~Gl~e~~~---~~yl~~ri~qv~yl~~~L  341 (467)
T TIGR02617       268 AMVPMGGLLCFKDDS--FFDVYTECRTLCVVQEGFP-TYGGLEGGAMERLAVGLYDGMN---LDWLAYRINQVQYLVNGL  341 (467)
T ss_pred             CCCcccceEEecchh--HHHHHHHHHhhcccccCCc-CcCchhHHHHHHHHhhhhhccc---HHHHHHHHHHHHHHHHHH
Confidence            988999999999840  00223333221     122 2567777788899888988754   456777777789999999


Q ss_pred             HhcCcEEecCCCCCceEEEccCC-------CCCcHHHH-HHhHhcCCeEE-cCCCC-----CCCCCCCC--CCeEEEccC
Q 009673          391 VELGYKLVSGGSDNHLVLVDLRP-------MGIDGARV-EKILDMASITL-NKNSV-----PGDKSALV--PGGIRIGSP  454 (529)
Q Consensus       391 ~~~G~~v~~~gt~~~~~~v~~~~-------~~i~~~~~-~~~L~~~GI~v-~~~~~-----Pg~~~~~~--~~~iRig~~  454 (529)
                      .+.|++++.  +..|-+++|...       ....+..+ ..+..+.||.. ..+++     |-......  -.-+|+.+|
T Consensus       342 ~~~Gvpi~~--~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~Rlaip  419 (467)
T TIGR02617       342 EEIGVVCQQ--AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIP  419 (467)
T ss_pred             HhCCCcEEe--cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccc
Confidence            999999886  346888887432       12233444 34446788863 22222     21111111  246999876


Q ss_pred             CCccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 009673          455 AMTTRGFSEKEFVAIADFIHEGVEITLEA  483 (529)
Q Consensus       455 ~~tt~g~~~~d~~~la~~i~~~~~~~~~~  483 (529)
                      -   |-+|.+.|+.+++.+..+.++...+
T Consensus       420 R---rvyt~~h~d~v~~~~~~~~~~~~~i  445 (467)
T TIGR02617       420 R---ATYTQTHMDFIIEAFKHVKENAPNI  445 (467)
T ss_pred             c---ccccHhHHHHHHHHHHHHHhhhhhc
Confidence            4   5588999999999999998876544

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=99.73  E-value=3.7e-15  Score=156.87  Aligned_cols=311  Identities=18%  Similarity=0.123  Sum_probs=188.2

Q ss_pred             cHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHHHHhhcCCC-
Q 009673          115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAILKPH-  192 (529)
Q Consensus       115 ~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs~A~~~~l~all~pG-  192 (529)
                      +|.+.+++...+.. +..  ...+ |. .....++    .++++++++.+ .+.   .+...+|++|+..++..+..+| 
T Consensus        61 ~p~v~~ai~~~~~~-~~~--~~~~-~~-~~~~~~l----a~~l~~~~~~~~~~~---v~~~~sgsea~~~al~~~~~~g~  128 (398)
T PRK03244         61 HPAVVEAVTRQLAT-LGH--VSNL-FA-TEPQIAL----AERLVELLGAPEGGR---VFFCNSGAEANEAAFKLARLTGR  128 (398)
T ss_pred             CHHHHHHHHHHHHh-ccC--ccCc-cC-CHHHHHH----HHHHHHhCCCCCCCE---EEEeCchHHHHHHHHHHHHHHCC
Confidence            68899998877643 211  1112 22 1212223    36788888854 221   2445677899999998776677 


Q ss_pred             CEEEEcCCCCCccccccccccccccccccce----------EEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673          193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY----------FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY  262 (529)
Q Consensus       193 D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~----------~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~  262 (529)
                      ++|+..++.|.|+...       .....+..          ..+..++      ..|++++++.+.+ ++++|++..+.+
T Consensus       129 ~~ii~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~~~~-~~~aviiep~~~  194 (398)
T PRK03244        129 TKIVAAEGGFHGRTMG-------ALALTGQPAKRAPFEPLPGGVEHVP------YGDVDALAAAVDD-DTAAVFLEPIQG  194 (398)
T ss_pred             CeEEEECCCcCCccHH-------HHhccCCcccccCCCCCCCCceEeC------CCCHHHHHHhhcC-CeEEEEEecccC
Confidence            4677666654333100       01111110          0111111      1478999998865 789999886665


Q ss_pred             CC--CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-CCCC-C-cccEEEecccccc-cCCCCeEEEeeCCCcc
Q 009673          263 PR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPF-K-YCDVVTTTTHKSL-RGPRGGMIFFKKDPVL  332 (529)
Q Consensus       263 p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~~~-~-~aDiv~~S~hK~l-~GprgG~i~~~~~~~~  332 (529)
                      ++  ..+    +++|.++|++||+++|+|++|. |+...+.. .... . ..|+++  ++|+| +|.|.|++++++    
T Consensus       195 ~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~~~~pDi~t--~sK~l~~G~~ig~~~~~~----  267 (398)
T PRK03244        195 EAGVVPPPAGYLAAAREITDRHGALLVLDEVQT-GIGRTGAWFAHQHDGVTPDVVT--LAKGLGGGLPIGACLAFG----  267 (398)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCcccchHHhhhhhCCCCCEEE--EchhhhCCcccEEEEEcH----
Confidence            54  444    8899999999999999999974 43222211 0011 1 357764  56998 456789999987    


Q ss_pred             hhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC-CCCCceEEEcc
Q 009673          333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG-GSDNHLVLVDL  411 (529)
Q Consensus       333 ~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~-gt~~~~~~v~~  411 (529)
                        ++.+.+.........+++.. ..++...+|+.+...   ++.+++.+..++|.+.|++.+++++.. .....+.++.+
T Consensus       268 --~~~~~~~~~~~~~t~~~~~~-~~aaa~a~l~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g~g~~~~i~~  341 (398)
T PRK03244        268 --PAADLLTPGLHGSTFGGNPV-ACAAALAVLDTIASE---GLLENAERLGEQLRAGIEALGHPLVDHVRGRGLLLGIVL  341 (398)
T ss_pred             --HHHhhccCCCCcCCCCCCHH-HHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhcCCCceeeEeeccEEEEEEE
Confidence              67666654322223344333 333334456654432   445677777888999998865532221 01234556665


Q ss_pred             CCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          412 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       412 ~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      ...  ....+.+.|.++||.+...         .+..||++.+..    ++++|++++++.|++++..
T Consensus       342 ~~~--~~~~~~~~l~~~Gv~~~~~---------~~~~iR~~p~~~----~t~~~i~~~~~~l~~~l~~  394 (398)
T PRK03244        342 TAP--VAKAVEAAAREAGFLVNAV---------APDVIRLAPPLI----ITDAQVDAFVAALPAILDA  394 (398)
T ss_pred             ecc--HHHHHHHHHHHCCeEEeec---------CCCEEEEECCCc----CCHHHHHHHHHHHHHHHHh
Confidence            321  3456778888899998531         246799997653    4589999999999998864

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=99.73  E-value=2.4e-15  Score=158.89  Aligned_cols=323  Identities=18%  Similarity=0.126  Sum_probs=188.8

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cCC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP  191 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~p  191 (529)
                      .+|.|++++...+.. .+ .++..  ++..+...    .+.+.++++++.+.+.   .+..+||++|+..++..+  ..+
T Consensus        53 ~~p~v~~a~~~~~~~-~~-~~~~~--~~~~~~~~----~l~~~l~~~~~~~~~~---v~~~~sgsea~~~al~~~~~~~~  121 (413)
T cd00610          53 NHPEVVEALKEQLAK-LT-HFSLG--FFYNEPAV----ELAELLLALTPEGLDK---VFFVNSGTEAVEAALKLARAYTG  121 (413)
T ss_pred             CCHHHHHHHHHHHHh-Cc-CccCc--ccCCHHHH----HHHHHHHHhCCCCCCE---EEEcCcHHHHHHHHHHHHHHHcC
Confidence            578999999877732 11 11110  01122233    3447888999865442   345678889999998876  367


Q ss_pred             CCEEEEcCCCCCcccccccccc-----ccccccccceEEEEEcccCC-----CCCCCCHHHHHHHhhhc--CCcEEEEcC
Q 009673          192 HDRIMGLDLPHGGHLSHGFMTP-----KRRVSGTSIYFESMPYRLDE-----STGLVDYDMLEKTAILF--RPKLIIAGA  259 (529)
Q Consensus       192 GD~Vl~~~~~~~g~~s~g~~~~-----~~~i~~~g~~~~~v~~~v~~-----~~~~iD~d~le~~i~~~--~pklIi~~~  259 (529)
                      +|+|++.++.+.|.........     ........  ..++.++.++     ..+..|+++|++.++.+  ++++|++..
T Consensus       122 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p  199 (413)
T cd00610         122 RKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLL--PGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEP  199 (413)
T ss_pred             CCeEEEECCCcCCccHHHHHhcCCccccccCCCCC--CCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEcc
Confidence            9999999987644321110000     00000001  1233333321     11345899999988762  466777764


Q ss_pred             CCCC-C-CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEeccccccc-CCCCeEEEeeCC
Q 009673          260 SAYP-R-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKD  329 (529)
Q Consensus       260 s~~p-~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~-GprgG~i~~~~~  329 (529)
                      .+++ + ..+    +++|.++|++||+++|+|++|. |+...+.. . .... ..|++  |++|++. |.|.|++++++ 
T Consensus       200 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-g~g~~g~~~~~~~~~~~~d~~--t~sK~l~~g~~~g~~~~~~-  275 (413)
T cd00610         200 IQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQT-GFGRTGKMFAFEHFGVEPDIV--TLGKGLGGGLPLGAVLGRE-  275 (413)
T ss_pred             ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchhhHhhcCCCCCeE--EEcccccCccccEEEEEcH-
Confidence            4333 2 455    8999999999999999999975 43211110 0 0011 34665  5569984 46779998887 


Q ss_pred             CcchhHHHhhh--cccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCc--EEec--CCCC
Q 009673          330 PVLGVELESAI--NNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY--KLVS--GGSD  403 (529)
Q Consensus       330 ~~~~~~l~~~i--~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~--~v~~--~gt~  403 (529)
                           ++.+.+  ......+..+++.. .+++..++++.+..   .++.+++.++.+++.+.|++.+.  .++.  .+ .
T Consensus       276 -----~~~~~~~~~~~~~~~t~~~~~~-~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~  345 (413)
T cd00610         276 -----EIMDAFPAGPGLHGGTFGGNPL-ACAAALAVLEVLEE---EGLLENAAELGEYLRERLRELAEKHPLVGDVRG-R  345 (413)
T ss_pred             -----HHHHhhccCCCCCCCCCCcCHH-HHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeec-C
Confidence                 677765  22222222333333 34444446766543   24567777788888888876321  2211  11 2


Q ss_pred             CceEEEccCCCC-------CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          404 NHLVLVDLRPMG-------IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       404 ~~~~~v~~~~~~-------i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      ..++++.+....       .+...+.+.|.++||.+..    +.     +..+|++.+..    ++++|++++++.|.++
T Consensus       346 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~----~~-----~~~lR~~~~~~----~t~~~i~~~~~~l~~~  412 (413)
T cd00610         346 GLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRP----SG-----GNVIRLLPPLI----ITEEEIDEGLDALDEA  412 (413)
T ss_pred             ceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEee----cC-----CCEEEEECCCc----CCHHHHHHHHHHHHHh
Confidence            345555553321       2345677888889999943    21     46799986543    5689999999998765

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=99.72  E-value=2.2e-15  Score=159.39  Aligned_cols=298  Identities=20%  Similarity=0.228  Sum_probs=194.6

Q ss_pred             CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc
Q 009673          110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL  189 (529)
Q Consensus       110 sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all  189 (529)
                      .+..+++.+.+++...+....  +.++  .|   +...++|+.+..++++++|.+.+..+  +.++.||+||+.++.+..
T Consensus        70 ~~~~~~~~a~~~~~~~~~~nl--~d~~--~~---p~a~~~E~~~v~~l~~l~~~~~~~~G--~~t~GgTean~lal~aar  140 (460)
T COG0076          70 CPTRVPPVAAELLVSALNKNL--GDPD--ES---PAAAELEERVVNMLSDLLGAPEEASG--TFTSGGTEANLLALLAAR  140 (460)
T ss_pred             CCCCCHHHHHHHHHHHHhhcC--CCcc--cC---hhHHHHHHHHHHHHHHHhCCCCCCce--EEEcChHHHHHHHHHHHH
Confidence            444567788888887775433  2332  12   23568899999999999999754333  334556699998776642


Q ss_pred             C-----C---CC------EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCc-E
Q 009673          190 K-----P---HD------RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK-L  254 (529)
Q Consensus       190 ~-----p---GD------~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pk-l  254 (529)
                      +     .   +.      +|+++.-   +|++.-     |.+.+.|...+.++  .++.+..+|+++|+++|.+.... +
T Consensus       141 ~~~~~~~~~~~~~~~~~P~ii~s~~---aH~s~~-----Kaa~~lG~~~~~v~--~~~~~~~id~~~l~~~i~~~t~~g~  210 (460)
T COG0076         141 ERWRKRALAESGKPGGKPNIVCSET---AHFSFE-----KAARYLGLGLRRVP--TVPTDYRIDVDALEEAIDENTIGGV  210 (460)
T ss_pred             HHHHHHhhhcccccCCCCeEEecCc---chhHHH-----HHHHHhCCCceeEE--eccCccccCHHHHHHHHHhhccCce
Confidence            1     1   11      5666654   344322     45667777555555  44336899999999999985544 1


Q ss_pred             EEEc--CCCCCCCCCHHHHHHHHHHhCCEEEEeccccccccc-ccccCCC----CCcccEEEecccccccCCCC-eEEEe
Q 009673          255 IIAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVA-ASVVADP----FKYCDVVTTTTHKSLRGPRG-GMIFF  326 (529)
Q Consensus       255 Ii~~--~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~-~~~~~~~----~~~aDiv~~S~hK~l~Gprg-G~i~~  326 (529)
                      |+..  .+..+...|+++|.+||+++++|+++|+|. .|.+. .......    ++++|.++.++||++..|.+ |++++
T Consensus       211 vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~-GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~  289 (460)
T COG0076         211 VVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAF-GGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLF  289 (460)
T ss_pred             EEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccc-cceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEE
Confidence            4333  444555899999999999999999999984 44432 2222222    24799999999999878877 99999


Q ss_pred             eCCCcchhHHHhhhccc--ccCC-------CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC-cE
Q 009673          327 KKDPVLGVELESAINNA--VFPG-------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG-YK  396 (529)
Q Consensus       327 ~~~~~~~~~l~~~i~~~--~~p~-------~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G-~~  396 (529)
                      +++.    ++.+.+...  ..++       +.++......++....++.+..++|.+..++..++++++++.|++.| ++
T Consensus       290 rd~e----~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e  365 (460)
T COG0076         290 RDEE----ALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFE  365 (460)
T ss_pred             ECHH----HhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcE
Confidence            9851    233322211  1111       12333343556666678887778899999999999999999999976 99


Q ss_pred             EecCCCCCceEEEccCCCC-Cc-HHHHHHhHhcCCeEEcC
Q 009673          397 LVSGGSDNHLVLVDLRPMG-ID-GARVEKILDMASITLNK  434 (529)
Q Consensus       397 v~~~gt~~~~~~v~~~~~~-i~-~~~~~~~L~~~GI~v~~  434 (529)
                      ++.++   .+.++.++... .+ ..+....+++.|..+..
T Consensus       366 ~~~~p---~l~~V~fr~~~~~~~~~~~~~~~~~~gw~v~~  402 (460)
T COG0076         366 LVNEP---ELPIVAFRLKDDEDTLADLSERLDRRGWQVPA  402 (460)
T ss_pred             eecCC---ccceEEEEcCCcccchhchHHHHHhcCceeec
Confidence            88743   33344443211 11 23455666667877754

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.72  E-value=3.8e-16  Score=162.08  Aligned_cols=289  Identities=21%  Similarity=0.245  Sum_probs=177.3

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      |++..+.+|    ++++++.|.+.     -+...||..|+.+++.+++++||+|++.+..|++....-    .......|
T Consensus        53 gnPt~~~le----~~la~Le~g~~-----a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~----~~~l~~~g  119 (386)
T PF01053_consen   53 GNPTVRALE----QRLAALEGGED-----ALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLL----EELLPRFG  119 (386)
T ss_dssp             C-HHHHHHH----HHHHHHHT-SE-----EEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHH----HHCHHHTT
T ss_pred             ccccHHHHH----HHHHHhhcccc-----eeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhh----hhhhcccC
Confidence            678888888    67788888864     245689999999999999999999999988776643211    01111223


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhC-CEEEEeccccccccccccc
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVG-ALLMMDMAHISGLVAASVV  298 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g-~~livD~ah~~Gli~~~~~  298 (529)
                        +++..++      .-|++++++++++ ++++|++..|.||.  ..|+++|+++|+++| +++++|.+....+     .
T Consensus       120 --v~v~~~d------~~d~~~l~~~l~~-~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~-----~  185 (386)
T PF01053_consen  120 --VEVTFVD------PTDLEALEAALRP-NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPY-----N  185 (386)
T ss_dssp             --SEEEEES------TTSHHHHHHHHCT-TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTT-----T
T ss_pred             --cEEEEeC------chhHHHHHhhccc-cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeecccccee-----e
Confidence              3555543      2478999999998 99999999999997  789999999999999 9999999854432     2


Q ss_pred             CCCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673          299 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV  374 (529)
Q Consensus       299 ~~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~  374 (529)
                      ..|+. ++|+++.|.+|++.|..   +|.+++++..    ++.+++....  ...|... ....+. ..++.+  ..+..
T Consensus       186 ~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~----~~~~~l~~~~--~~~G~~~-~p~da~-ll~rgl--~Tl~~  255 (386)
T PF01053_consen  186 QNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSS----ELYDRLREFR--RLLGATL-SPFDAW-LLLRGL--RTLPL  255 (386)
T ss_dssp             C-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHH----HHHHHHHHHH--HHHT-B---HHHHH-HHHHHH--TTHHH
T ss_pred             eccCcCCceEEEeeccccccCCcceeeEEEEECchh----hhhhhhcchh--hhcCccc-hHHHHH-HHhcCC--CcHHH
Confidence            35666 79999999999998876   5888877621    4555443221  1112211 112211 123333  23567


Q ss_pred             HHHHHHHHHHHHHHHHHhc-CcE-EecCCC---------------CCceEEEccCCCCCcHHHHHHhHhcCCeE---EcC
Q 009673          375 YQNKVVSNCRALASRLVEL-GYK-LVSGGS---------------DNHLVLVDLRPMGIDGARVEKILDMASIT---LNK  434 (529)
Q Consensus       375 ~~~~i~~~a~~l~~~L~~~-G~~-v~~~gt---------------~~~~~~v~~~~~~i~~~~~~~~L~~~GI~---v~~  434 (529)
                      ++++..+|+..+++.|++. .+. |..++-               ...++.+++..   ..+.+.+.++...+.   ++.
T Consensus       256 R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~---~~~~~~~f~~~l~l~~~~~Sl  332 (386)
T PF01053_consen  256 RMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKG---GEEAARRFLDALKLFSIAPSL  332 (386)
T ss_dssp             HHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESS---HHHHHHHHHHH-SSSEESSS-
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEecc---chhhhHhHHhhhhhHhhhhhc
Confidence            8899999999999999984 443 332211               11244555542   113555666555543   221


Q ss_pred             CC------CCCCC------------CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          435 NS------VPGDK------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       435 ~~------~Pg~~------------~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +.      .|...            ....++-||+++.        -||.+.|.+-|+++++
T Consensus       333 Gg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvG--------lEd~~dLi~Dl~~AL~  386 (386)
T PF01053_consen  333 GGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVG--------LEDPDDLIADLEQALE  386 (386)
T ss_dssp             SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE----------SS-HHHHHHHHHHHHH
T ss_pred             CCcccccccccchhhccCChhhhhccCCCCCeeEEEec--------cCCHHHHHHHHHHhcC
Confidence            11      13211            0112356899864        2788888888877764

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=99.72  E-value=3.3e-15  Score=144.79  Aligned_cols=340  Identities=17%  Similarity=0.165  Sum_probs=226.3

Q ss_pred             cceeEecCC-CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHH
Q 009673          103 KSLELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN  181 (529)
Q Consensus       103 ~~i~L~ase-n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~  181 (529)
                      +.|.|..+. .-.|+.+...........|.++...+...+-..|.+.-|. .-++++.+.|+...+    |.++.+++.|
T Consensus        31 ~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~-lgdklApLiGA~~~E----vvv~dtts~n  105 (407)
T COG3844          31 GVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPER-LGDKLAPLIGARAGE----VVVTDTTSIN  105 (407)
T ss_pred             CeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhH-HHHHhhhhhcCCCCc----eEEeCCcchH
Confidence            456665433 2457677777777777778776554433333445554443 448899999999865    3346666665


Q ss_pred             HH-HHHhh--cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          182 FE-VYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       182 ~~-~l~al--l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      .. ++.+.  ..+|++|+++.-.  ...+ .++....-+...+..     +++   .+.++++++++.+++ .+.+|+++
T Consensus       106 l~k~L~aalr~~~~r~vIv~E~~--~fpT-dly~a~g~~~~~~~~-----~~~---~~~~~P~~~~~~~~d-d~AvV~L~  173 (407)
T COG3844         106 LFKVLAAALRPQEGRRVIVSEGD--NFPT-DLYIAEGLADLLGIG-----YDL---EGVIAPRALEEAITD-DVAVVLLS  173 (407)
T ss_pred             HHHHHHHHhccCCCceEEeecCC--CCCc-chhhhcchhhhhccc-----ccc---eeeeChHHHHHhhcc-ceEEEEec
Confidence            53 44444  3469999987632  2222 222222222223321     222   256788899999988 78888888


Q ss_pred             CCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccccccc-CCCC-eEEEeeCCC----
Q 009673          259 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLR-GPRG-GMIFFKKDP----  330 (529)
Q Consensus       259 ~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~-Gprg-G~i~~~~~~----  330 (529)
                      ..+|-+  ..|+.+|..+|++||++++.|-||++|.++.+.+..   ++|+-++++||.|. ||.+ +++++.++.    
T Consensus       174 ~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~---gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~  250 (407)
T COG3844         174 HVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAA---GADFAIGCSYKYLNGGPGAPAGLFVAPRHRERS  250 (407)
T ss_pred             cccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeeccc---CCCeeeeeeceeccCCCCCceeEEecccccccc
Confidence            777665  789999999999999999999999999886655444   69999999999995 4555 788887642    


Q ss_pred             -----cch-----hHHHhhhcc--cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cC
Q 009673          331 -----VLG-----VELESAINN--AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LG  394 (529)
Q Consensus       331 -----~~~-----~~l~~~i~~--~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G  394 (529)
                           .++     +.+.+....  ....+.+|++.+..++++..+|+.....+..+.+++.....+++.+.++.    .+
T Consensus       251 ~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~  330 (407)
T COG3844         251 WPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYG  330 (407)
T ss_pred             ccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCC
Confidence                 011     111111111  11123468888888898888888776666778888888888888877765    26


Q ss_pred             cEEecCC----CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673          395 YKLVSGG----SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA  470 (529)
Q Consensus       395 ~~v~~~g----t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la  470 (529)
                      +++.++.    ..+|..+   ...  .+..+.+.|.++||+.+..         .|+.+|++...+.+   +-+|+=..+
T Consensus       331 l~l~tPr~~~~rGsqvS~---~hp--~~~~V~qaLi~rGVigD~R---------~P~vlRfgftPlY~---~~~DVw~AV  393 (407)
T COG3844         331 LTLVTPRAHEERGSQVSL---YHP--HGYQVMQALIDRGVIGDFR---------EPDVLRFGFTPLYV---SFVDVWDAV  393 (407)
T ss_pred             cEEeccchhhhccceeeE---ecC--cHHHHHHHHHHcCcccccc---------CCCeeeecCcccee---chhHHHHHH
Confidence            7787752    1234322   221  4788999999999997542         47889999754442   368898899


Q ss_pred             HHHHHHHHH
Q 009673          471 DFIHEGVEI  479 (529)
Q Consensus       471 ~~i~~~~~~  479 (529)
                      +.|.+++..
T Consensus       394 ~~L~evL~t  402 (407)
T COG3844         394 DALEEVLDT  402 (407)
T ss_pred             HHHHHHHHh
Confidence            999888864

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.71  E-value=1.6e-15  Score=155.84  Aligned_cols=217  Identities=23%  Similarity=0.224  Sum_probs=149.8

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      |++..+.+|    +.++++=|.+.     -+...||..|+..++.+++++||+|+..+..||+.+...    .+-..-.|
T Consensus        61 ~nPT~~~lE----~~~a~LEg~~~-----~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~----~~~l~~~g  127 (396)
T COG0626          61 GNPTRDALE----EALAELEGGED-----AFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLF----EKILQKFG  127 (396)
T ss_pred             CCccHHHHH----HHHHHhhCCCc-----EEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHH----HHHHHhcC
Confidence            577788888    56677777775     255699999999999999999999999988777654211    01111122


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                        +++..++      .-|.+++++.+.+.++|+|++..|.||+  ..|+++|+++|+++|+.+++|.+-..+     ...
T Consensus       128 --i~~~~~d------~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP-----~~q  194 (396)
T COG0626         128 --VEVTFVD------PGDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATP-----VLQ  194 (396)
T ss_pred             --eEEEEEC------CCChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccc-----ccc
Confidence              3444433      2244566666663489999999999998  789999999999999999999984443     345


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhccccc--CCCCCCChHHHHHHHHHHHHHhcCchHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF--PGLQGGPHNHTIGGLAVCLKHAQSPEFK  373 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~--p~~~g~p~~~~iaala~al~~~~~~~~~  373 (529)
                      .|++ ++|||+.|.+|.+.|..   +|+++++++     ++.+.+.....  .|..-+|.    -| ...++-+.  -+.
T Consensus       195 ~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~-----~~~~~~~~~~~~~~G~~l~p~----dA-~l~lRGlk--TL~  262 (396)
T COG0626         195 RPLELGADIVVHSATKYLGGHSDVLGGVVLTPNE-----ELYELLFFAQRANTGAVLSPF----DA-WLLLRGLR--TLA  262 (396)
T ss_pred             ChhhcCCCEEEEeccccccCCcceeeeEEecChH-----HHHHHHHHHHHhhcCCCCCHH----HH-HHHHhccc--hHH
Confidence            6776 79999999999998754   387776664     55555422111  12222221    11 22334332  356


Q ss_pred             HHHHHHHHHHHHHHHHHHh-cCcE
Q 009673          374 VYQNKVVSNCRALASRLVE-LGYK  396 (529)
Q Consensus       374 ~~~~~i~~~a~~l~~~L~~-~G~~  396 (529)
                      .++++..+|+..+++.|++ +.+.
T Consensus       263 ~Rm~~~~~nA~~IA~~L~~~p~V~  286 (396)
T COG0626         263 LRMERHNENALKIAEFLADHPKVK  286 (396)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCeE
Confidence            7789999999999999988 3443

>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]

Probab=99.71  E-value=1.8e-15  Score=150.60  Aligned_cols=281  Identities=18%  Similarity=0.215  Sum_probs=186.3

Q ss_pred             eeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccc-cccceEEEEEcccCCC-CCCCCHHHHHHHh
Q 009673          171 NVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDES-TGLVDYDMLEKTA  247 (529)
Q Consensus       171 ~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~-~~g~~~~~v~~~v~~~-~~~iD~d~le~~i  247 (529)
                      +|.++.|+ .||.++...|.+|||.-|++.|.|+|.--        .++ ..|  ++++++.++.. ++.++.+++|.+.
T Consensus       148 ~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdr--------dl~~rTg--veivpv~c~Ss~~f~itv~alE~A~  217 (471)
T KOG0256|consen  148 RVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDR--------DLRWRTG--VEIVPVHCSSSNGFQITVEALEAAL  217 (471)
T ss_pred             ceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccc--------cceeccC--ceEEEEEeecCCCccccHHHHHHHH
Confidence            34446665 99999999999999999999998887522        222 234  47778777654 4799999998877


Q ss_pred             hh-----cCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC-C-------ccc--E
Q 009673          248 IL-----FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K-------YCD--V  307 (529)
Q Consensus       248 ~~-----~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-~-------~aD--i  307 (529)
                      .+     .+.|.|++.+|+||-  ..   .+..+...|.++|+.||+|+. |+|-++....-.++ +       ..|  -
T Consensus       218 ~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEI-ya~sVF~~~~F~Sv~ev~~~~~~~~~rvH  296 (471)
T KOG0256|consen  218 NQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEI-YAGSVFDKSEFRSVLEVRKDPHLDPDRVH  296 (471)
T ss_pred             HHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehh-hcccccCccCceEHHHHhhccccCCCcEE
Confidence            53     367888888888884  33   466777888999999999998 66766553211111 1       112  4


Q ss_pred             EEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Q 009673          308 VTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA  385 (529)
Q Consensus       308 v~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~  385 (529)
                      ++.|++|-|  +|.|.|.|+..++     ++.....+....+..++...+.++++- +=++..+....+..+++..+.++
T Consensus       297 ivyslSKD~GlpGfRvGviYS~ne-----~VvsaA~kmssf~~vSs~tQ~~la~LL-SD~~f~~~yl~en~~Rl~~rh~~  370 (471)
T KOG0256|consen  297 IVYSLSKDFGLPGFRVGVIYSNNE-----DVVSAATKMSSFGLVSSQTQYLLASLL-SDEEFTREYLRENNKRLRIRHRY  370 (471)
T ss_pred             EEEEeccccCCCceEEEEEEecCh-----HHHHHHHHHhhccCCcHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHH
Confidence            678999965  7888899999886     676666554333332222222233221 11222222236667788888889


Q ss_pred             HHHHHHhcCcEEecCCCCCceEEEccCCC----CCcHH--HHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCcc
Q 009673          386 LASRLVELGYKLVSGGSDNHLVLVDLRPM----GIDGA--RVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTT  458 (529)
Q Consensus       386 l~~~L~~~G~~v~~~gt~~~~~~v~~~~~----~i~~~--~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt  458 (529)
                      +.+.|++.|++++..+ ..-++|+|++..    ...++  -..+.+++.++.++    ||.. -...+|++|+.+..   
T Consensus       371 ~~~gLk~lgI~cl~s~-AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlS----pG~s~~C~EpGWFRvcFAn---  442 (471)
T KOG0256|consen  371 IVEGLKALGIPCLKSN-AGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLS----PGSSCHCHEPGWFRVCFAN---  442 (471)
T ss_pred             HHhhHHhcCCceeecC-CeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccC----CCCcceecCCCeEEEEecc---
Confidence            9999999999998753 345678898642    11221  24566677788884    5544 34568999998754   


Q ss_pred             CCCCHHHHHHHHHHHHHHHH
Q 009673          459 RGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       459 ~g~~~~d~~~la~~i~~~~~  478 (529)
                        +.++.++...++|+..+.
T Consensus       443 --~~~~t~~~am~Ri~~~~~  460 (471)
T KOG0256|consen  443 --MSEETLEVAMRRLKQFLD  460 (471)
T ss_pred             --CCHHHHHHHHHHHHHHHH
Confidence              556666667777777665

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=99.71  E-value=3.3e-15  Score=154.45  Aligned_cols=295  Identities=13%  Similarity=0.145  Sum_probs=191.5

Q ss_pred             chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc-CCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all-~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      .++.+.++ .+.+.++++|+.+.+ +.+.+...|||.++.+++..++ ++||+|++..     .++..+..  +.....|
T Consensus        35 ~~F~~i~~-e~~~~L~~l~~~~~~-~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-----~FG~r~~~--eia~~~g  105 (374)
T TIGR01365        35 KLGKEKLA-EAIKKTREMLGVPAD-YLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-----SFGKGWVT--DVTKQLK  105 (374)
T ss_pred             HHHHHHHH-HHHHHHHHHhCCCCC-cEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-----HHHHHHHH--HHHHhcC
Confidence            44545444 566899999998543 3355667889999999999999 5899999753     33332210  1122344


Q ss_pred             ce-EEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC--CCCCCCCHHHHHHHHHHhCCEEEEeccccccccccccc
Q 009673          222 IY-FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS--AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV  298 (529)
Q Consensus       222 ~~-~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s--~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~  298 (529)
                      .. +..+.  .+ .+..+|+++++.     +.. |++++.  +.+...|++++....  +++++++|+....|..     
T Consensus       106 ~~~v~~l~--~~-~g~~~~~~~ve~-----~~~-v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~-----  169 (374)
T TIGR01365       106 LPDVRVLE--AE-YGKLPDLKKVDF-----KND-VVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQ-----  169 (374)
T ss_pred             CCCcEEEc--CC-CCCCCCHHHcCC-----CCC-EEEecCCCchheecccccccccc--CCCcEEEEccchhcCC-----
Confidence            41 33333  22 456889999872     122 444433  344467776655322  5899999997666543     


Q ss_pred             CCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcc---------------------ccc-CCCCCCChHH
Q 009673          299 ADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN---------------------AVF-PGLQGGPHNH  355 (529)
Q Consensus       299 ~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~---------------------~~~-p~~~g~p~~~  355 (529)
                      +..++.+|++++|.+|+|.+|.| ++++.+++      ..++++.                     ... ..+..+|+.+
T Consensus       170 ~l~~d~iDv~~tgsQK~L~~ppGls~v~vs~~------Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~  243 (374)
T TIGR01365       170 DLDYHKLDVVTFSWQKVLGGEGAHGMLILSPR------AVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSML  243 (374)
T ss_pred             CCChhHCcEEEEechhccCCCCceEEEEECHH------HHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHH
Confidence            22233589999999999999999 89999884      2221110                     000 1223466777


Q ss_pred             HHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcC-cEEecC--CCCCceE-EEccCCCCC-----c-----HHH
Q 009673          356 TIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG-YKLVSG--GSDNHLV-LVDLRPMGI-----D-----GAR  420 (529)
Q Consensus       356 ~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G-~~v~~~--gt~~~~~-~v~~~~~~i-----~-----~~~  420 (529)
                      .+.++..+++.+..+ +++++.++..++++.+++.+++.| +.++..  ...++.+ .+.+...++     +     ..+
T Consensus       244 ~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~  323 (374)
T TIGR01365       244 CVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKE  323 (374)
T ss_pred             HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHH
Confidence            777777778766554 689999999999999999999998 776652  2223322 233433333     2     577


Q ss_pred             HHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       421 ~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      +.+.|.+.||.+..+    - +...+..+|||+...    ++.+|++.+.++|+=+.
T Consensus       324 ~~~~l~~~gi~i~~G----~-~~~~~~~fRIg~~G~----i~~~di~~l~~~l~~~~  371 (374)
T TIGR01365       324 LISTLEKEGVAYDIG----S-YRDAPSGLRIWCGAT----VEKSDLECLCPWLDWAF  371 (374)
T ss_pred             HHHHHHHCCEEEecc----c-cccCCCceEEecCCc----CCHHHHHHHHHHHHHHH
Confidence            889998899998432    2 122347899997543    56899999999987554

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=99.70  E-value=5.2e-15  Score=154.62  Aligned_cols=314  Identities=16%  Similarity=0.140  Sum_probs=185.0

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCC
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP  191 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~p  191 (529)
                      ..+|+|.+++...+.+...   ....+      ..+++....+++.+.++.+.     .+..+||++|+..++... ..+
T Consensus        45 ~~~p~v~~a~~~~~~~~~~---~~~~~------~~~~~~~la~~l~~~~~~~~-----~~~~~sG~~a~~~A~~~a~~~~  110 (377)
T PRK02936         45 HCHPTVTKAVQEQLDDIWH---VSNLF------TNSLQEEVASLLAENSAGDL-----VFFCNSGAEANEAALKLARKHT  110 (377)
T ss_pred             CCCHHHHHHHHHHHHhccc---ccccc------CCHHHHHHHHHHHhcCCCCE-----EEEeCCcHHHHHHHHHHHHHhc
Confidence            3578899998887754221   11111      12334344466666665432     345689999999988843 334


Q ss_pred             C-CEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCC---CCCCHHHHHHHhhhcCCcEEEEcCCCCCC--
Q 009673          192 H-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAILFRPKLIIAGASAYPR--  264 (529)
Q Consensus       192 G-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~~---~~iD~d~le~~i~~~~pklIi~~~s~~p~--  264 (529)
                      | ++|++.+..+.|....+       +...+.. ...-..++.++.   -..|++++++.+.+ ++++|++....+.+  
T Consensus       111 g~~~vi~~~~~~Hg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~ii~e~i~~~~G~  182 (377)
T PRK02936        111 GKSKIVTFEQSFHGRTFGT-------MSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNE-EVAAVMLEVVQGEGGV  182 (377)
T ss_pred             CCCeEEEECCCcCCCcHHh-------hhccCCccccccCCCCCCCceEeCCCCHHHHHHhccC-CeEEEEEecccCCCCC
Confidence            5 67888876543221111       1111110 000000111010   01278999999876 78888886443222  


Q ss_pred             ----CCCHHHHHHHHHHhCCEEEEecccccccccccccCC--CCC-cccEEEecccccc-cCCCCeEEEeeCCCcchhHH
Q 009673          265 ----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVEL  336 (529)
Q Consensus       265 ----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~~-~aDiv~~S~hK~l-~GprgG~i~~~~~~~~~~~l  336 (529)
                          ..++++|+++|++||+++|+|++| .|+...+....  .+. ..|++  +++|++ +|+|+|++++++      ++
T Consensus       183 ~~~~~~~l~~l~~l~~~~~~~lI~DEv~-~g~g~~g~~~~~~~~~~~~di~--t~sK~l~~G~~ig~v~~~~------~~  253 (377)
T PRK02936        183 IPADPAFLQEVQTLCKKFGALLIIDEVQ-TGIGRTGTLFAYEQFGLDPDIV--TVAKGLGNGIPVGAMIGKK------EL  253 (377)
T ss_pred             ccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCchhhHHHhhCCCCcEE--EEcccccCCCccEEEEEcH------HH
Confidence                234899999999999999999997 46543331100  011 24665  578998 567899999987      67


Q ss_pred             HhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEecC-CCCCceEEEccCC
Q 009673          337 ESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSG-GSDNHLVLVDLRP  413 (529)
Q Consensus       337 ~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~~-gt~~~~~~v~~~~  413 (529)
                      .+.+.........+++.. ..++..++++....   .++.+++.++.+.+.+.|++.  ++..+.. .....++++++..
T Consensus       254 ~~~~~~~~~~~t~~~~~~-~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~  329 (377)
T PRK02936        254 GTAFGPGSHGSTFGGNPL-AMAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTE  329 (377)
T ss_pred             HhhccCCCCCCCCCCCHH-HHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEecc
Confidence            776654332233344333 44444446765432   245567777888888888762  3332221 0123566777653


Q ss_pred             CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          414 MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       414 ~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                         +...+.+.|.+.||.+.    |+     ..+.|||+.+..    .++++++++++.|.+++
T Consensus       330 ---~~~~~~~~l~~~gv~v~----~~-----g~~~lRi~p~~~----~~~~~i~~~i~~l~~~~  377 (377)
T PRK02936        330 ---EVAPVIEQLREEGLLVL----SA-----GPNVIRLLPPLV----VTKEELDQAVYLLKKVL  377 (377)
T ss_pred             ---hHHHHHHHHHHCCeEEe----cC-----CCCEEEEECCcc----cCHHHHHHHHHHHHHhC
Confidence               24667788889999983    32     246899986543    56899999999997753

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.70  E-value=4.6e-15  Score=140.25  Aligned_cols=323  Identities=17%  Similarity=0.201  Sum_probs=204.0

Q ss_pred             cceeEec--CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCC-C------chhHHHHHHHHHHHHHHHcCCCCCCCceeee
Q 009673          103 KSLELIA--SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG-G------NEYIDELETLCQKRALAAFNLDENKWGVNVQ  173 (529)
Q Consensus       103 ~~i~L~a--sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~-g------~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~  173 (529)
                      +.||+.+  --..++++.++|+-.     |..||.--.|.. |      .+.+..+-    +.+++++|.|.      +.
T Consensus        16 ~~iNv~PiQrGGiLt~eArkal~E-----~gDGYSvCD~C~~Grldei~kPpI~~F~----~dlaeFlg~D~------~R   80 (382)
T COG1103          16 GFINVNPIQRGGILTEEARKALLE-----WGDGYSVCDFCLEGRLDEITKPPIKDFL----EDLAEFLGMDE------VR   80 (382)
T ss_pred             CccccChhhccCcCCHHHHHHHHH-----hcCCcchhhhhccCccccccCCcHHHHH----HHHHHHhCCce------ee
Confidence            5677655  334678999999863     445554322221 1      12222222    34889999985      45


Q ss_pred             cCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC-CCCCCCCHHHHHHHhhhc-
Q 009673          174 PLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILF-  250 (529)
Q Consensus       174 ~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~-~~~~~iD~d~le~~i~~~-  250 (529)
                      +|.|+ +|-++++.+++++||.|++..+.|   ++..-     +....|.  ++..+|-. ...+.+++|...+.|++. 
T Consensus        81 ~t~GARe~KfavMhal~~~gd~vV~D~~aH---Yttyv-----AAEragl--~v~eVp~tg~Pey~i~~e~y~~viee~~  150 (382)
T COG1103          81 VTAGAREAKFAVMHALCKEGDWVVVDSLAH---YTTYV-----AAERAGL--NVAEVPNTGYPEYKITPEGYAEVIEEVK  150 (382)
T ss_pred             ecccchhhHHHHHHHhccCCCEEEEcCcch---HHHHH-----HHHhcCC--eEEecCCCCCCceEecHHHHHHHHHHHH
Confidence            59999 999999999999999999887644   43221     2334454  55555521 113577887766655431 


Q ss_pred             -----CCcEEEEcCC--CCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccccC-CCC
Q 009673          251 -----RPKLIIAGAS--AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRG-PRG  321 (529)
Q Consensus       251 -----~pklIi~~~s--~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~G-prg  321 (529)
                           .|.+.++.++  +|+...|.+++++||+++|++++...|+..|-.+..    .-+ ++|++++|.||+++. .+.
T Consensus       151 ~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs----~ke~g~DFiVgSGHKsmAAs~Pi  226 (382)
T COG1103         151 DEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVS----GKEIGADFIVGSGHKSMAASAPI  226 (382)
T ss_pred             hccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeecccccc----ccccCCCEEEecCccchhccCCe
Confidence                 2667777754  566688999999999999999999999877754322    112 799999999999843 345


Q ss_pred             eEEEeeCCCcchhHHHhhhccc--c-cC-------C--CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Q 009673          322 GMIFFKKDPVLGVELESAINNA--V-FP-------G--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR  389 (529)
Q Consensus       322 G~i~~~~~~~~~~~l~~~i~~~--~-~p-------~--~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~  389 (529)
                      |++..+.      ++.+.+-+.  . ++       |  ..|.|....+|++-...+.+      ....+-+++++.+.+.
T Consensus       227 Gvl~~~e------E~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRV------krWdeEv~kaR~fv~e  294 (382)
T COG1103         227 GVLAMSE------EWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERV------KRWDEEVEKARWFVAE  294 (382)
T ss_pred             eEEeehh------HHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHH------HHHHHHHHHHHHHHHH
Confidence            8888877      565543211  0 11       1  24555555555544333332      2234456678899999


Q ss_pred             HHhcC-cEEecCCCCCceE-EEccCCC-------CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCC
Q 009673          390 LVELG-YKLVSGGSDNHLV-LVDLRPM-------GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG  460 (529)
Q Consensus       390 L~~~G-~~v~~~gt~~~~~-~v~~~~~-------~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g  460 (529)
                      |.+.| +..+.....+|-. .+..+..       .-.+-++.+.|.+.||.--   -||     ....+.+|+     .|
T Consensus       295 lEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI---~~G-----~Tk~~K~sv-----yG  361 (382)
T COG1103         295 LEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGI---QPG-----QTKYFKLSV-----YG  361 (382)
T ss_pred             HHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCcccc---ccC-----ceeEEEEEe-----ec
Confidence            99864 7665533334422 2211100       0123457788888888631   233     245677764     68


Q ss_pred             CCHHHHHHHHHHHHHHHHH
Q 009673          461 FSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       461 ~~~~d~~~la~~i~~~~~~  479 (529)
                      +++|+++++++.++++++.
T Consensus       362 l~~Eqve~V~~afkeI~ek  380 (382)
T COG1103         362 LSWEQVEYVVDAFKEIAEK  380 (382)
T ss_pred             CCHHHHHHHHHHHHHHHHh
Confidence            8999999999999998864

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=99.69  E-value=1.1e-14  Score=152.98  Aligned_cols=310  Identities=16%  Similarity=0.136  Sum_probs=180.3

Q ss_pred             cHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCC--
Q 009673          115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH--  192 (529)
Q Consensus       115 ~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pG--  192 (529)
                      .|.|.+++...+... ..  .... |. .+.    .....+++++++|.+.     .+...+|++|+.+++..+..++  
T Consensus        57 ~p~v~~a~~~~~~~~-~~--~~~~-~~-~~~----~~~la~~l~~~~~~~~-----v~~~~gg~eA~~~al~~a~~~~~~  122 (396)
T PRK02627         57 HPKLVEAIQEQAAKL-IH--TSNL-YY-IEP----QEELAEKLVELSGMDK-----VFFCNSGAEANEAAIKLARKYGHK  122 (396)
T ss_pred             CHHHHHHHHHHHhhc-cc--cccc-cC-CHH----HHHHHHHHHhhcCCCE-----EEECCCcHHHHHHHHHHHHHHhcc
Confidence            478888888766432 11  1111 11 222    2233477778777642     2445677799999998765444  


Q ss_pred             -----CEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCCC----CCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673          193 -----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDESTG----LVDYDMLEKTAILFRPKLIIAGASAY  262 (529)
Q Consensus       193 -----D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~~~----~iD~d~le~~i~~~~pklIi~~~s~~  262 (529)
                           ++|++.++.+.|..     ..  .+...+.. +.....++. .+.    ..|++++++.+.+ ++++|++..+++
T Consensus       123 ~~~~~~~ii~~~~~yhg~~-----~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~i~~-~~~~vii~p~~~  193 (396)
T PRK02627        123 KGIEKPEIITAENSFHGRT-----LA--TLSATGQPKYQEGFEPLV-EGFIYVPFNDIEALKAAITD-KTAAVMLEPIQG  193 (396)
T ss_pred             cCCCCCeEEEECCCcCccc-----HH--HHHhcCCccccccCCCCC-CCceEeCCCCHHHHHHhcCC-CeEEEEEecccC
Confidence                 67888877653221     10  11111110 000011111 111    2389999999976 789999876554


Q ss_pred             CC---C---CCHHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-cccEEEecccccc-cCCCCeEEEeeCCCc
Q 009673          263 PR---D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSL-RGPRGGMIFFKKDPV  331 (529)
Q Consensus       263 p~---~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~-~aDiv~~S~hK~l-~GprgG~i~~~~~~~  331 (529)
                      ++   .   ..+++|.++|++||+++|+|++|. |+...+.. .++   . ..|++  +++|.+ +|.|.|++++++   
T Consensus       194 ~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~-g~g~~g~~-~~~~~~~~~pdi~--t~sK~~~~G~rig~~~~~~---  266 (396)
T PRK02627        194 EGGVNPADKEYLQALRELCDENGILLILDEVQT-GMGRTGKL-FAYQHYGIEPDIM--TLAKGLGGGVPIGAVLAKE---  266 (396)
T ss_pred             CCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-CCCccCce-eeehhcCCCCCEE--EEcchhhCCcccEEEEEcH---
Confidence            43   1   248899999999999999999965 54333211 111   1 24665  467998 567889999987   


Q ss_pred             chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEec--CCCCCceE
Q 009673          332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS--GGSDNHLV  407 (529)
Q Consensus       332 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~--~gt~~~~~  407 (529)
                         ++.+.+.........+++.. ..++...+++....   .++.+++.++.+.+.+.|.+.  .+..+.  .+ ...++
T Consensus       267 ---~~~~~~~~~~~~~t~~~~~~-~~~aa~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~~  338 (396)
T PRK02627        267 ---KVADVFTPGDHGSTFGGNPL-ACAAALAVIEIIEE---EGLLENAAEVGEYLRAKLRELLEKYPGIKEVRG-LGLMI  338 (396)
T ss_pred             ---HHHhccCCCCCCCCCCCCHH-HHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeeeecc-CcEEE
Confidence               67766654322223333333 33343445665433   234566666677777766552  121111  11 23455


Q ss_pred             EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ++.+.   .+..++.+.|.+.||.+..    +     ..+.+||+.+..    +++++++++.+.|++++.
T Consensus       339 ~i~~~---~~~~~~~~~l~~~Gv~v~~----~-----~~~~lRi~~~~~----~~~~~i~~~~~~l~~~l~  393 (396)
T PRK02627        339 GIELD---RPAAEIVKKALEKGLLINV----T-----GDNVLRLLPPLI----ISKEEIDEAVDRLEEVLK  393 (396)
T ss_pred             EEEec---CcHHHHHHHHHHCCeEEee----c-----CCCEEEEECCcc----cCHHHHHHHHHHHHHHHH
Confidence            66552   2456677777677999943    2     236799986532    468999999999988775

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=99.68  E-value=4.6e-14  Score=148.61  Aligned_cols=318  Identities=14%  Similarity=0.097  Sum_probs=183.8

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----  189 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all----  189 (529)
                      -+|.|.+++...+. .+..+.   +.+ ..+...++    .+.++++++.+.     .+..+||++|+..++..+.    
T Consensus        48 ~~p~v~~a~~~~~~-~~~~~~---~~~-~~~~~~~~----~~~l~~~~~~~~-----~~~~~SGs~A~e~al~~~~~~~~  113 (400)
T PTZ00125         48 CHPKILAALINQAQ-KLTLTS---RAF-YNDVLGLA----EKYITDLFGYDK-----VLPMNSGAEAGETALKFARKWGY  113 (400)
T ss_pred             CCHHHHHHHHHHHH-hccccc---ccc-cCHHHHHH----HHHHHhCCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence            57899999987763 332221   111 12223333    366777777643     3557899999999888663    


Q ss_pred             ------CCCCEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCC---CCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          190 ------KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDES---TGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       190 ------~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~---~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                            ..+++|+..+-.+.|....       .+...+.. +.....+..+.   -...|++++++.++..++++|++..
T Consensus       114 ~~~~~~~~~~~vl~~~~~~Hg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep  186 (400)
T PTZ00125        114 EVKGIPENQAKIIFCNGNFSGRTIG-------ACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEP  186 (400)
T ss_pred             hccCCCCCCCeEEEECCCcCCccHH-------HHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcC
Confidence                  1357788777543222100       11111110 00000000000   0124899999998633789999876


Q ss_pred             CCCCC--CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-CCCCC--cccEEEecccccccC--CCCeEEEeeC
Q 009673          260 SAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK--YCDVVTTTTHKSLRG--PRGGMIFFKK  328 (529)
Q Consensus       260 s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~~~~--~aDiv~~S~hK~l~G--prgG~i~~~~  328 (529)
                      +.+++  ..+    +++|.++|++||+++|+|++|. |+...+.. .....  ..|++++  +|++.|  ++.|++++++
T Consensus       187 ~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~-g~g~~G~~~~~~~~~~~pd~~~~--sK~l~~g~~~ig~v~~~~  263 (400)
T PTZ00125        187 IQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQT-GLGRTGKLLAHDHEGVKPDIVLL--GKALSGGLYPISAVLAND  263 (400)
T ss_pred             ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhhHHHhcCCCCCEEEE--cccccCCCcCcEEEEEcH
Confidence            65554  454    9999999999999999999974 44222211 11111  2577765  499854  4779999988


Q ss_pred             CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----CcE-EecCCCC
Q 009673          329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----GYK-LVSGGSD  403 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~----G~~-v~~~gt~  403 (529)
                            ++.+.+.........+++... .++...+++.+...++   .+++.+..+.+.+.|++.    ++. .+.+  .
T Consensus       264 ------~~~~~~~~~~~~~t~~~~~~~-~~aa~~~l~~i~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~--~  331 (400)
T PTZ00125        264 ------DVMLVIKPGEHGSTYGGNPLA-CAVAVEALEVLKEEKL---AENAQRLGEVFRDGLKELLKKSPWVKEIRG--K  331 (400)
T ss_pred             ------HHHhhccCCCCCCCCCcCHHH-HHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHhcCCCeEEEec--c
Confidence                  677766543222233443333 3333345666543333   345555666677777652    221 1222  2


Q ss_pred             CceEEEccCC-CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          404 NHLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       404 ~~~~~v~~~~-~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      ..+.++.+.. .+.+...+.+.|.++||.+.    |+     ....|||+.+..    ++++|++++.+.|.+++...
T Consensus       332 g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~----~~-----~~~~lRi~~~~~----~~~~~i~~~l~~l~~~l~~~  396 (400)
T PTZ00125        332 GLLNAIVFDHSDGVNAWDLCLKLKENGLLAK----PT-----HDNIIRFAPPLV----ITKEQLDQALEIIKKVLKSF  396 (400)
T ss_pred             cEEEEEEEccCcchHHHHHHHHHHHCCeEEe----ec-----CCCEEEEECCcc----CCHHHHHHHHHHHHHHHHHH
Confidence            2344454432 23345567777778899984    32     246899997633    56899999999999887643

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=99.67  E-value=3.4e-14  Score=149.80  Aligned_cols=309  Identities=15%  Similarity=0.104  Sum_probs=184.0

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---  189 (529)
                      .-+|+|.+++...+.+....+.     ....+...+++    ++++++++.+.     ....+||++||..++....   
T Consensus        56 h~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~----~~l~~~~~~~~-----~~~~~sGseA~e~a~klar~~~  121 (403)
T PRK05093         56 HCHPALVKALKEQGEKLWHISN-----VFTNEPALRLA----KKLIDATFAER-----VFFANSGAEANEAAFKLARRYA  121 (403)
T ss_pred             CCCHHHHHHHHHHHHhcCcccC-----ccCCHHHHHHH----HHHHhhCCCCE-----EEEeCchHHHHHHHHHHHHHHH
Confidence            3588999999887754221111     11222223333    66777776542     2456899999999887541   


Q ss_pred             -----CCCCEEEEcCCC-CCccccccccccccccccccce-----E-----EEEEcccCCCCCCCCHHHHHHHhhhcCCc
Q 009673          190 -----KPHDRIMGLDLP-HGGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILFRPK  253 (529)
Q Consensus       190 -----~pGD~Vl~~~~~-~~g~~s~g~~~~~~~i~~~g~~-----~-----~~v~~~v~~~~~~iD~d~le~~i~~~~pk  253 (529)
                           ...++|+..+-. ||.+..        .++..+..     +     ..+.++      ..|++++++.+.+ +++
T Consensus       122 ~~~~~~~~~~ii~~~~~~HG~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~-~~a  186 (403)
T PRK05093        122 CDRHGPEKTEIIAFHNSFHGRTLF--------TVSVGGQPKYSDGFGPKPADITHVP------FNDLAAVKAVIDD-HTC  186 (403)
T ss_pred             hhcCCCCCCeEEEEcCCcCCchhh--------hHhhcCChhhhhcCCCCCCCcEEeC------CCCHHHHHHHhcC-CeE
Confidence                 123467766644 333220        01111100     0     111111      2388999998876 788


Q ss_pred             EEEEcCCCCCC--C-----CCHHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-cccEEEecccccc-cCCCC
Q 009673          254 LIIAGASAYPR--D-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSL-RGPRG  321 (529)
Q Consensus       254 lIi~~~s~~p~--~-----~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~-~aDiv~~S~hK~l-~Gprg  321 (529)
                      +|+++ |.+|.  .     ..+++|+++|++||+++|+|++|. |+...+.. .+.   . ..|+  .|++|++ +|+|.
T Consensus       187 aiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~-~~~~~~~~~pdi--~s~sK~l~~G~ri  261 (403)
T PRK05093        187 AVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT-GMGRTGDL-FAYMHYGVTPDI--LTSAKALGGGFPI  261 (403)
T ss_pred             EEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccc-hhhhhcCCCCCE--EEecccccCCcce
Confidence            99888 33332  2     238999999999999999999965 65443321 111   1 2455  4677998 67889


Q ss_pred             eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCc--EEe-
Q 009673          322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY--KLV-  398 (529)
Q Consensus       322 G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~--~v~-  398 (529)
                      |++++++      ++.+.+.........+++...+.++ ..+|+.+..   .++.+++.++.+.+.+.|++.+.  .++ 
T Consensus       262 g~vv~~~------~i~~~l~~~~~~~t~~~~~~~~~aa-~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~  331 (403)
T PRK05093        262 GAMLTTA------EIASHFKVGTHGSTYGGNPLACAVA-EAVFDIINT---PEVLEGVKARRQRFVDGLQKINQKYGVFS  331 (403)
T ss_pred             EEEEEcH------HHHhhcCCCCCCCCCCCCHHHHHHH-HHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence            9999988      6777765433333344444444443 345665533   24567788888999999987532  121 


Q ss_pred             -cCCCCCceEEEccCCCC-CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          399 -SGGSDNHLVLVDLRPMG-IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       399 -~~gt~~~~~~v~~~~~~-i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                       .++ ...++++.+.+.. .+..++...|.+.||.+.    |+     +.+.+||+.+..    +++++++++.+.|.++
T Consensus       332 ~~~~-~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~----~~-----g~~~lRl~~~~~----~~~~~i~~~~~~l~~~  397 (403)
T PRK05093        332 EIRG-MGLLIGAELKPQYKGRARDFLNAAAEEGVMVL----VA-----GPDVLRFAPSLV----IEEADIDEGLARFEKA  397 (403)
T ss_pred             eEee-CceEEEEEecCcchhHHHHHHHHHHHCCeEEe----cC-----CCCEEEEeCCCC----CCHHHHHHHHHHHHHH
Confidence             111 1344555553321 124556677777899984    21     246899976543    4589999999999988


Q ss_pred             HHH
Q 009673          477 VEI  479 (529)
Q Consensus       477 ~~~  479 (529)
                      +..
T Consensus       398 l~~  400 (403)
T PRK05093        398 VAK  400 (403)
T ss_pred             HHH
Confidence            753

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=99.67  E-value=5.6e-14  Score=148.09  Aligned_cols=310  Identities=14%  Similarity=0.097  Sum_probs=183.4

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----  189 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all----  189 (529)
                      ..|+|.+|+...+. ++..+.+   .+ ..+...+++    +++++++|.+.     .+..+||++||..++..+.    
T Consensus        54 ~~p~v~~a~~~~~~-~~~~~~~---~~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~ai~~a~~~~~  119 (401)
T TIGR01885        54 CHPKIVKALTEQAQ-KLTLSSR---AF-YNDVFGEFA----EYVTKLFGYDK-----VLPMNTGAEAVETAIKLARKWGY  119 (401)
T ss_pred             CCHHHHHHHHHHHH-hcccccc---cc-CCHHHHHHH----HHHHhhcCCCE-----EEEeCccHHHHHHHHHHHHHHhh
Confidence            47999999987764 2332221   11 233334444    67778888542     3557999999999888642    


Q ss_pred             -----CC-CCEEEEcCCCCCccccccccccccccccccce-----E-----EEEEcccCCCCCCCCHHHHHHHhhhc--C
Q 009673          190 -----KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILF--R  251 (529)
Q Consensus       190 -----~p-GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-----~-----~~v~~~v~~~~~~iD~d~le~~i~~~--~  251 (529)
                           .+ .++|+.....|.|... +      .+...+..     +     ..+.++      ..|+++|+++++..  +
T Consensus       120 ~~~~~~~~~~~i~~~~~~yhg~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~  186 (401)
T TIGR01885       120 KVKGIPENQAIIVSAKGNFHGRTL-G------AISMSTDPDSRTNFGPYVPGFKKIP------YNNLEALEEALEDHGPN  186 (401)
T ss_pred             hhcCCCCCCCEEEEECCCcCcccH-H------HHhCcCCcccccccCCCCCCceEeC------CCCHHHHHHHHHhcCCC
Confidence                 23 3567766655433210 0      11111100     0     111111      23789999988643  3


Q ss_pred             CcEEEEcCCCC--CCCCC----HHHHHHHHHHhCCEEEEecccccccccccccC-CC-CC-cccEEEecccccccC--CC
Q 009673          252 PKLIIAGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DP-FK-YCDVVTTTTHKSLRG--PR  320 (529)
Q Consensus       252 pklIi~~~s~~--p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~-~~-~~-~aDiv~~S~hK~l~G--pr  320 (529)
                      ..+|++....+  +...+    +++|+++|++||+++|+|++| .|+...+... .. .. ..|++++  +|.++|  ++
T Consensus       187 ~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~-~g~g~~G~~~~~~~~~~~~di~~~--gK~l~~g~~~  263 (401)
T TIGR01885       187 VCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQ-TGLGRTGKLLCVDHENVKPDIVLL--GKALSGGVYP  263 (401)
T ss_pred             EEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCccchhhHHhhcCCCCCEEEe--eccccCCCCC
Confidence            34666653322  22333    899999999999999999997 5653333211 00 11 3577765  499854  67


Q ss_pred             CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec-
Q 009673          321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS-  399 (529)
Q Consensus       321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~-  399 (529)
                      .|++++++      ++.+.+.......+.+++.. ..++...+|+.+..++   ..++..++.+++.+.|++.+..++. 
T Consensus       264 ig~v~~~~------~i~~~~~~~~~~~t~~~~p~-~~~aa~a~L~~i~~~~---l~~~~~~~~~~~~~~L~~l~~~~~~~  333 (401)
T TIGR01885       264 VSAVLADD------DVMLTIKPGEHGSTYGGNPL-ACAVAVAALEVLEEEK---LAENAEKLGEIFRDQLKKLPKPIITE  333 (401)
T ss_pred             cEEEEEcH------HHHhhccCCCCCCCCCCCHH-HHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhccCCceeE
Confidence            78898887      67776654333333444333 3334444677664333   3456666788899999886544432 


Q ss_pred             -CCCCCceEEEccCCC--CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          400 -GGSDNHLVLVDLRPM--GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       400 -~gt~~~~~~v~~~~~--~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                       .+ ...+..+.+...  +.+..++.+.|.++||.+.+    .     .+..+||+++.    .++++|++++++.|.++
T Consensus       334 ~~g-~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~----~-----~~~~lRi~p~l----~~t~~~i~~~l~~l~~~  399 (401)
T TIGR01885       334 VRG-RGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKP----T-----HGNIIRLAPPL----VITEEQLDEGLEIIKKV  399 (401)
T ss_pred             Eee-cCeeEEEEeccCcchhHHHHHHHHHHhCCEEEEe----c-----CCCEEEEeCCc----cCCHHHHHHHHHHHHHH
Confidence             12 223333333221  12456778888889999843    1     25689998763    36799999999999876


Q ss_pred             H
Q 009673          477 V  477 (529)
Q Consensus       477 ~  477 (529)
                      +
T Consensus       400 l  400 (401)
T TIGR01885       400 I  400 (401)
T ss_pred             h
Confidence            5

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=99.66  E-value=4.5e-14  Score=148.53  Aligned_cols=310  Identities=16%  Similarity=0.128  Sum_probs=183.4

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----  189 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all----  189 (529)
                      -.|+|.+|+...+.+-+..+.   . + .++...+++    ++++++++.+.     ....+||++||..++....    
T Consensus        52 ~~p~v~~a~~~~~~~~~~~~~---~-~-~~~~~~~la----~~L~~~~~~~~-----~~f~~SGseA~e~Alk~ar~~~~  117 (397)
T TIGR03246        52 AHPELVKALIEQADKLWHIGN---G-Y-TNEPVLRLA----KKLVDATFADK-----VFFCNSGAEANEAALKLARRYAL  117 (397)
T ss_pred             CCHHHHHHHHHHHHhcccccC---c-c-CCHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence            478999999887754221111   1 1 123333333    67777776542     2456899999999888651    


Q ss_pred             ---CC-CCEEEEcCCC-CCccccccccccccccccccce-----E-----EEEEcccCCCCCCCCHHHHHHHhhhcCCcE
Q 009673          190 ---KP-HDRIMGLDLP-HGGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILFRPKL  254 (529)
Q Consensus       190 ---~p-GD~Vl~~~~~-~~g~~s~g~~~~~~~i~~~g~~-----~-----~~v~~~v~~~~~~iD~d~le~~i~~~~pkl  254 (529)
                         ++ .++|+..+-. ||.+..        .+...+..     +     .+..++      ..|++++++.+.+ ++++
T Consensus       118 ~~~~~~r~~ii~~~~~yHG~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~-~~aa  182 (397)
T TIGR03246       118 DKHGADKSEIVAFKNSFHGRTLF--------TVSVGGQPKYSQGFAPLPGGIKHAP------YNDLAAAKALISD-KTCA  182 (397)
T ss_pred             hcCCCCCCEEEEECCCcCCccHH--------HHHhcCCcccccCCCCCCCceEEeC------CCCHHHHHHHhcc-CeEE
Confidence               12 3567766643 333210        11111110     0     111111      2488999999976 7888


Q ss_pred             EEEcCCCCC-C-----CCCHHHHHHHHHHhCCEEEEecccccccccccccCC--CCC-cccEEEecccccc-cCCCCeEE
Q 009673          255 IIAGASAYP-R-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL-RGPRGGMI  324 (529)
Q Consensus       255 Ii~~~s~~p-~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~~-~aDiv~~S~hK~l-~GprgG~i  324 (529)
                      |++...+.. +     ...+++|+++|++||+++|+|++| .|+...|....  .+. ..|++  +++|.+ +|.+.|++
T Consensus       183 vi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~Gr~G~~~a~~~~gv~pDi~--t~~K~lggG~pigav  259 (397)
T TIGR03246       183 VIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDIL--TSAKALGGGFPIGAM  259 (397)
T ss_pred             EEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcCCccccchhhhhcCCCCCEE--EeehhhhCCcceeEE
Confidence            888743322 1     234899999999999999999997 66632222110  111 35776  467998 67788999


Q ss_pred             EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC--cEEec--C
Q 009673          325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLVS--G  400 (529)
Q Consensus       325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G--~~v~~--~  400 (529)
                      ++++      ++.+.+.......+.++... ..++..++++.+..   .+..+++.++.+++.+.|++.+  +.++.  .
T Consensus       260 ~~~~------~i~~~~~~~~~~~t~~~~p~-~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vr  329 (397)
T TIGR03246       260 LTTT------EIAAHLKVGTHGTTYGGNPL-ACAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINARYNVFSEIR  329 (397)
T ss_pred             EEcH------HHHHhccCCCcCCCCCCCHH-HHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEeee
Confidence            9987      67776654322223333333 34443446665533   3456778888888999887743  22222  1


Q ss_pred             CCCCceEEEccCCC-CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          401 GSDNHLVLVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       401 gt~~~~~~v~~~~~-~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      + ...++.+.+... ......+.+.|.++||.+...         +++.+|+..+..    ++++|++++++.|.+++..
T Consensus       330 g-~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------g~~~lR~~p~~~----~t~~~i~~~~~~l~~~l~~  395 (397)
T TIGR03246       330 G-KGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALIA---------GPNVVRFAPSLV----ISDDDIDEGLARFERAIEQ  395 (397)
T ss_pred             c-CceEEEEEEcCchhhHHHHHHHHHHHCCeEEeec---------CCCEEEEeCCCC----CCHHHHHHHHHHHHHHHHH
Confidence            1 122223333211 112456777788899998421         246899975532    5699999999999988763

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]

Probab=99.66  E-value=9.7e-15  Score=137.35  Aligned_cols=279  Identities=17%  Similarity=0.169  Sum_probs=182.9

Q ss_pred             cCCCCCCCceeeecCChH-HHHHHHHHhhcCCC-CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCC
Q 009673          161 FNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV  238 (529)
Q Consensus       161 ~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~i  238 (529)
                      -++.++    |+.+..|+ +.+.+++.+.+.|| ++|+...|+++.+.      ...+  ..+  .+++.+++++ ++.+
T Consensus        82 kpLt~d----nic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~------v~A~--iNd--~eVvkvpl~p-dF~l  146 (375)
T KOG0633|consen   82 KPLTSD----NICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYV------VDAA--IND--AEVVKVPLNP-DFSL  146 (375)
T ss_pred             CCCCcc----ceEEecCcHHHHHHHHhheecCCccceeecCCcceeEE------EEee--cCC--ceEEEecCCC-Cccc
Confidence            455664    67778999 88889999999999 89999888765321      1112  233  3777888875 6999


Q ss_pred             CHHHHHHHhhhc-CCcEEEEcCCCCCC--CCCHHHHHHHHHH-hCCEEEEecccccccccccccCCCC--Cccc-EEEec
Q 009673          239 DYDMLEKTAILF-RPKLIIAGASAYPR--DFDYPRMRQIADA-VGALLMMDMAHISGLVAASVVADPF--KYCD-VVTTT  311 (529)
Q Consensus       239 D~d~le~~i~~~-~pklIi~~~s~~p~--~~d~~~i~~ia~~-~g~~livD~ah~~Gli~~~~~~~~~--~~aD-iv~~S  311 (529)
                      |.|++.+.++.. ++|++++++|+||+  .+-.+.|.+|.+- -|.++++|+|+ ..+...+ ...++  .|.. ++..+
T Consensus       147 nvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAY-idFsg~~-S~~~lV~kYpNLivlqT  224 (375)
T KOG0633|consen  147 NVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAY-IDFSGVE-SRMKLVKKYPNLIVLQT  224 (375)
T ss_pred             cHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeee-Eeecccc-ccchHhHhCCceeehhh
Confidence            999999988764 78999999999998  4555566666543 27899999994 3332211 11111  2445 66789


Q ss_pred             ccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Q 009673          312 THKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR  389 (529)
Q Consensus       312 ~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~  389 (529)
                      ++|++  +|.|.|+-+++.      .+.+.++....|+..+.+.  ..+|++ |+..-.....+.++..+.+.+.+|...
T Consensus       225 lSKsfGLAGiRvG~~~~~~------~ia~iln~~KaPYNiS~~~--s~~AL~-Als~~n~kkme~~rdaiv~er~RL~ke  295 (375)
T KOG0633|consen  225 LSKSFGLAGIRVGYGAFPL------SIAEILNRAKAPYNISVAG--SVAALA-ALSDSNGKKMEDVRDAIVRERERLFKE  295 (375)
T ss_pred             hhhhcCcceeEeecccccH------HHHHHHHhccCCccccchh--HHHHHH-hcCcccchHHHHHHHHHHHHHHHHHHH
Confidence            99985  788999999988      6888787777776543321  233333 232111123467788888889999999


Q ss_pred             HHh-cCcEEecCCCCCceEEEccCCC--CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHH
Q 009673          390 LVE-LGYKLVSGGSDNHLVLVDLRPM--GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEF  466 (529)
Q Consensus       390 L~~-~G~~v~~~gt~~~~~~v~~~~~--~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~  466 (529)
                      |.+ .++.-+.+|.+++++++.+...  +.+.....+.+...||.|+..   |. .+...|++||+..       ++|+-
T Consensus       296 Lt~v~~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfr---gs-e~~c~G~lRitvG-------t~Een  364 (375)
T KOG0633|consen  296 LTEVPFLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFR---GS-EEGCKGYLRITVG-------TPEEN  364 (375)
T ss_pred             hhcCccccCCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEc---CC-ccccceeEEEEcC-------Ccccc
Confidence            988 3444345667888888776421  111122344456799999743   22 1235788999642       24666


Q ss_pred             HHHHHHHHHH
Q 009673          467 VAIADFIHEG  476 (529)
Q Consensus       467 ~~la~~i~~~  476 (529)
                      ..+.+.+++.
T Consensus       365 tvL~k~~K~~  374 (375)
T KOG0633|consen  365 TVLMKCLKQF  374 (375)
T ss_pred             hHHHHHHHhh
Confidence            6676666543

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=99.66  E-value=3.7e-14  Score=145.25  Aligned_cols=335  Identities=14%  Similarity=0.091  Sum_probs=210.1

Q ss_pred             cceeEecCCCCCcHHHHHHHhhhhhccCCCCCC-CCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHH
Q 009673          103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN  181 (529)
Q Consensus       103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p-~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~  181 (529)
                      +..+++|++..+|++|++++...+.+....|.. -.....+.++.+.++ .+.+.++++|+++.+ +.+.+...+||.++
T Consensus         4 ~~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~-~~~~~Lr~Ll~~P~~-y~Vlfl~GggT~~~   81 (364)
T PRK12462          4 NQLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLA-QAEADLRDLLGIPDE-YGVVFLQGGSSLQF   81 (364)
T ss_pred             ccceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHH-HHHHHHHHHhCCCCC-CeEEEEeccHHHHH
Confidence            457889999999999999999888764433321 111222345555554 567999999999543 33556666778999


Q ss_pred             HHHHHhhcCCCCEEE-EcCCCCCccccccccccccccccccceEEEEEcccC-CCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          182 FEVYTAILKPHDRIM-GLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       182 ~~~l~all~pGD~Vl-~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~-~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      .++.+.|+++||+++ +..   .|+++..+..   .....| .++++...-. ..+..++++++  .+.+ +.+.|.++.
T Consensus        82 ea~~~Nll~~g~~~~~~~~---tG~fg~r~~~---ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~-d~~~v~~t~  151 (364)
T PRK12462         82 SMIPMNFSRPGAAAPEYVT---TGYWSRKAIG---EASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDA-RAPFRHYVS  151 (364)
T ss_pred             HHHHHHcCCCCCcEEEEEe---CCHHHHHHHH---HHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCC-CCcEEEEcc
Confidence            999999999999765 443   3444433211   111223 1233221000 01235666665  1222 467777664


Q ss_pred             CCCC--CCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHH
Q 009673          260 SAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL  336 (529)
Q Consensus       260 s~~p--~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l  336 (529)
                      ....  ...+     ++.+.+++++++|++...+..     +..++..|++.++.+|+|+ |.| ++++.+++      .
T Consensus       152 NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~-----pid~~~~dvi~agsQKnlg-P~Gltvvivs~~------a  214 (364)
T PRK12462        152 NETVEGLQFP-----DAAGLPDSPLIADMSSDFMSR-----PFDVEAYGMVYAHAQKNLG-PAGVTVAIIRRA------L  214 (364)
T ss_pred             CCCCceEecC-----cccccCCCeEEEEcCchhhCC-----CCChHHccEEEeeccccCC-CCceEEEEECHH------H
Confidence            4333  3343     233346899999997444322     2233345999999999995 888 88888884      3


Q ss_pred             Hhhhcccc-----------cCCCCCCChHHHHHHHHHHHHHhcCc--hHHHHHHHHHHHHHHHHHHHHhc-CcEEec--C
Q 009673          337 ESAINNAV-----------FPGLQGGPHNHTIGGLAVCLKHAQSP--EFKVYQNKVVSNCRALASRLVEL-GYKLVS--G  400 (529)
Q Consensus       337 ~~~i~~~~-----------~p~~~g~p~~~~iaala~al~~~~~~--~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~--~  400 (529)
                      .++.....           .....-||....+.++..+|+.+..+  +.+.+.++..+.++.+++.+.+. |+....  +
T Consensus       215 l~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~  294 (364)
T PRK12462        215 LERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHR  294 (364)
T ss_pred             HhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCh
Confidence            33322110           00123488999999999999988776  78999999999999999999885 354332  2


Q ss_pred             CCCCceE-EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          401 GSDNHLV-LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       401 gt~~~~~-~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ...+.+. .+.+..... .+++.+..+++|+.-    +-|+.+   -+|+|+|+-  +  .++.++++.|++++++.-+
T Consensus       295 ~~RS~mnv~f~~~~~~l-~~~f~~~a~~~gl~~----lkGhr~---vgg~Ras~y--n--a~~~e~v~~L~~fm~~f~~  361 (364)
T PRK12462        295 AARSTMNVAFRFRQPRL-DTLFKEQSTEAGFCG----LSGHRS---IGGIRASLY--N--AVSEQAVSRLCAFLKDFAI  361 (364)
T ss_pred             hhcCcceEEEEcCCHHH-HHHHHHHHHHCCCcc----ccCCcc---cCceEEEcC--C--CCCHHHHHHHHHHHHHHHH
Confidence            2223332 334433222 245667778899986    334432   578999862  2  3678999999999987644

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.66  E-value=2.5e-15  Score=137.64  Aligned_cols=163  Identities=26%  Similarity=0.312  Sum_probs=115.4

Q ss_pred             HHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC
Q 009673          153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD  232 (529)
Q Consensus       153 a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~  232 (529)
                      ++++++++|+.+.+.  +.+ .++|++|+..++.++.++|++|++.++.|.++..  .     .....|.  +++.++.+
T Consensus         5 ~~~~l~~~~~~~~~~--~~~-~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~--~-----~~~~~g~--~~~~v~~~   72 (170)
T cd01494           5 LEEKLARLLQPGNDK--AVF-VPSGTGANEAALLALLGPGDEVIVDANGHGSRYW--V-----AAELAGA--KPVPVPVD   72 (170)
T ss_pred             HHHHHHHHcCCCCCc--EEE-eCCcHHHHHHHHHHhCCCCCEEEEeecccceehh--h-----HHHhcCC--EEEEeccC
Confidence            347889999644332  333 3477899999999999999999999998877642  1     1233444  56666655


Q ss_pred             CCC-CCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEE
Q 009673          233 EST-GLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVT  309 (529)
Q Consensus       233 ~~~-~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~  309 (529)
                      ..+ ...|.+.+++.....+|++++++.+++++  ..|+++|.++|+++|+++++|++|..+............++|+++
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~  152 (170)
T cd01494          73 DAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVT  152 (170)
T ss_pred             CCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEE
Confidence            322 22333356555544488999998776665  568899999999999999999998876654322111223689999


Q ss_pred             ecccccccCCCCeEEEee
Q 009673          310 TTTHKSLRGPRGGMIFFK  327 (529)
Q Consensus       310 ~S~hK~l~GprgG~i~~~  327 (529)
                      .|+||+|.++++|+++++
T Consensus       153 ~s~~K~~~~~~~G~l~~~  170 (170)
T cd01494         153 FSLHKNLGGEGGGVVIVK  170 (170)
T ss_pred             EEcccccCCCceEEEEeC
Confidence            999999988888999874

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=99.64  E-value=1.4e-14  Score=152.51  Aligned_cols=290  Identities=19%  Similarity=0.242  Sum_probs=192.9

Q ss_pred             HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673          153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL  231 (529)
Q Consensus       153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v  231 (529)
                      +++.+++.||++...+     +++|| .||..+++++++|||+||+....|-++. ||       +-++|+  .++++.-
T Consensus        75 Aqe~aA~~fgAd~tyF-----vvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~-~g-------lilaGa--~Pvyl~p  139 (557)
T COG1982          75 AQELAARVFGADHTYF-----VVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIH-HG-------LILAGA--TPVYLEP  139 (557)
T ss_pred             HHHHHHHHhCCCceEE-----EECCccHHHHHHHHhhcCCCCEEEecCCccHHHH-HH-------HHHcCC--ceEEecC
Confidence            4578899999998643     25666 8999999999999999999988775543 22       345565  5554332


Q ss_pred             --CCC---CCCCCHHHHHHHhhhcC-C-cEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEecccccccccccccCCC-C
Q 009673          232 --DES---TGLVDYDMLEKTAILFR-P-KLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP-F  302 (529)
Q Consensus       232 --~~~---~~~iD~d~le~~i~~~~-p-klIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~-~  302 (529)
                        ++.   -+.|+.+.+++.+.+++ . |++++..++|-+ ..+.++|.+.++..++|+.+|.+|.......+..+.+ .
T Consensus       140 ~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~  219 (557)
T COG1982         140 SRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESAL  219 (557)
T ss_pred             CCCccccccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhh
Confidence              221   15789999988776632 3 677777777655 7899999999999999999999987655444433332 2


Q ss_pred             -CcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH----H
Q 009673          303 -KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY----Q  376 (529)
Q Consensus       303 -~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~----~  376 (529)
                       .++|+++-|+||.+++..- .+|..++...   --.++++.+..-...++|.+..+|++.+|-.+....+ ++.    .
T Consensus       220 ~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~---~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G-~~l~~~~~  295 (557)
T COG1982         220 NGGADFVTQSTHKLLAALSQASMIHVKDGRA---VNHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAG-RELWQEVI  295 (557)
T ss_pred             hcCceEEEechhhhhhhhhhhHHHhhCCCcc---CCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhh-HHHHHHHH
Confidence             2789999999999977655 7888775200   1234555544444467889999999987544433222 333    4


Q ss_pred             HHHHHHHHHHHHHHHh-cCcEEecCCC--------------------CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCC
Q 009673          377 NKVVSNCRALASRLVE-LGYKLVSGGS--------------------DNHLVLVDLRPMGIDGARVEKILDMASITLNKN  435 (529)
Q Consensus       377 ~~i~~~a~~l~~~L~~-~G~~v~~~gt--------------------~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~  435 (529)
                      ....+.++.+.+...+ .+++++.++.                    |.--+.+..+..|+++..+.++|++.||...+.
T Consensus       296 ~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~e~gii~e~~  375 (557)
T COG1982         296 DEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLREHGIIPEET  375 (557)
T ss_pred             HHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHHHHcCCeeeec
Confidence            5555666666666665 3577665431                    111123344467899999999999999988653


Q ss_pred             CCCCCCCCCCCCe--EEEccCCCccCCCCHHHHHHHHHHHH
Q 009673          436 SVPGDKSALVPGG--IRIGSPAMTTRGFSEKEFVAIADFIH  474 (529)
Q Consensus       436 ~~Pg~~~~~~~~~--iRig~~~~tt~g~~~~d~~~la~~i~  474 (529)
                      .         ...  +=++ +..   |-...++++++++..
T Consensus       376 ~---------d~~~lll~~-~~~---gk~~~lv~~L~~f~r  403 (557)
T COG1982         376 G---------DYSNLLLFS-PGI---GKWQTLVDRLLEFKR  403 (557)
T ss_pred             C---------CceeeEEee-ecc---chHHHHHHHHHHHHH
Confidence            1         111  1122 111   445678888888877

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.64  E-value=5.4e-14  Score=146.09  Aligned_cols=244  Identities=19%  Similarity=0.167  Sum_probs=157.9

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCC----ceeeecCChHHHHHHHHHhhcC--------C-----CCEEEEcCCCCCc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKW----GVNVQPLSGSPANFEVYTAILK--------P-----HDRIMGLDLPHGG  204 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~----~~~V~~~sGs~A~~~~l~all~--------p-----GD~Vl~~~~~~~g  204 (529)
                      ..+...++|..+.+|+++++|.+.+..    +.-+..++||++|+.++.+..+        .     ++.+++.+-  .+
T Consensus        73 ~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~--~a  150 (373)
T PF00282_consen   73 ASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSE--QA  150 (373)
T ss_dssp             TSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEET--TS
T ss_pred             cccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccc--cc
Confidence            346678999999999999999993211    1345556777999887765421        1     233444332  23


Q ss_pred             cccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--C---CcEEEEc--CCCCCCCCCHHHHHHHHHH
Q 009673          205 HLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--R---PKLIIAG--ASAYPRDFDYPRMRQIADA  277 (529)
Q Consensus       205 ~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~--~---pklIi~~--~s~~p~~~d~~~i~~ia~~  277 (529)
                      |++.     .+...+.|..  ++.++++ +++.+|+++|++++.+.  +   |-+|+.+  .+..+...|+++|++||++
T Consensus       151 H~S~-----~Kaa~~lGlg--~~~I~~~-~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~  222 (373)
T PF00282_consen  151 HYSI-----EKAARILGLG--VRKIPTD-EDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEK  222 (373)
T ss_dssp             -THH-----HHHHHHTTSE--EEEE-BB-TTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHH
T ss_pred             ccHH-----HHhcceeeeE--EEEecCC-cchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccc
Confidence            4332     2456777875  5566676 47899999999988653  2   3244443  3444458899999999999


Q ss_pred             hCCEEEEeccccccccccc-ccC--CCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh-------c-----
Q 009673          278 VGALLMMDMAHISGLVAAS-VVA--DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI-------N-----  341 (529)
Q Consensus       278 ~g~~livD~ah~~Gli~~~-~~~--~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i-------~-----  341 (529)
                      +|+|+++|+|+........ ..+  ..++.+|-++.++|||+..|-+ |+++++++.    .+....       .     
T Consensus       223 ~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~----~l~~~~~~~~~Yl~~~~~~  298 (373)
T PF00282_consen  223 YNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKS----DLRDAFSINADYLGNDDRE  298 (373)
T ss_dssp             CT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGG----GHHGGGEEEETCTT-S-SS
T ss_pred             cceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeeccc----chHHHhccChhhhcccccc
Confidence            9999999998543222212 111  2234799999999999988877 999988851    122211       1     


Q ss_pred             -----ccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecC
Q 009673          342 -----NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSG  400 (529)
Q Consensus       342 -----~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~  400 (529)
                           ......++++. -...+.++..++....++|.++.++..+++++|.+.|++ .+++++.+
T Consensus       299 ~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~  362 (373)
T PF00282_consen  299 SDESYDYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNE  362 (373)
T ss_dssp             S-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESST
T ss_pred             cccccccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcC
Confidence                 00012235554 334455666788777788999999999999999999998 46888764

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.63  E-value=1.7e-14  Score=145.32  Aligned_cols=319  Identities=19%  Similarity=0.194  Sum_probs=202.5

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCC
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP  191 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~p  191 (529)
                      +..+.+.+++.     +|.....++|...|+ +.+.++|    +..++++|.+.+     +...-|-..|...+.+|+.|
T Consensus       155 ~ca~~~~~~~~-----kygl~~css~~e~G~~~~hkelE----~l~A~f~g~e~a-----~vF~mGf~TNs~~~p~l~~~  220 (519)
T KOG1357|consen  155 PCAEASLKSFD-----KYGLSRCSSRHEAGTTEEHKELE----ELVARFLGVEDA-----IVFSMGFATNSMNIPSLLGK  220 (519)
T ss_pred             cCChHHHHHHH-----HhcccccccchhcccHHHHHHHH----HHHHHhcCCcce-----EEEeccccccccCcceeecC
Confidence            44677777775     344444455554444 4456777    667889999974     33467778888889999999


Q ss_pred             CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---------cCC--cEEEEc--
Q 009673          192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---------FRP--KLIIAG--  258 (529)
Q Consensus       192 GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~---------~~p--klIi~~--  258 (529)
                      |-.|+...+.|.+...        .++.+|+  .+.-+..      -|.++||+.+++         ++|  |++++.  
T Consensus       221 gsLIiSDelNHaSi~~--------GaRLSgA--tiRVfkH------Ndm~~LEr~Lrd~I~~gqP~Thrp~kki~iiveg  284 (519)
T KOG1357|consen  221 GSLIISDELNHASLIT--------GARLSGA--TTRVFRH------NDMQGLERLLRDAIVYGQPKTHRPWKKILICVEG  284 (519)
T ss_pred             Ccceeeccccchheec--------cccccCc--eEEEEec------CCHHHHHHHHHHHHhcCCCCcCCcchheeeeecc
Confidence            9999999988866543        3456776  3333332      245566655543         123  455554  


Q ss_pred             -CCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccc-cc----cCCC-CCcccEEEecccccccCCCCeEEEeeCCCc
Q 009673          259 -ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV----VADP-FKYCDVVTTTTHKSLRGPRGGMIFFKKDPV  331 (529)
Q Consensus       259 -~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~~----~~~~-~~~aDiv~~S~hK~l~GprgG~i~~~~~~~  331 (529)
                       ++.-+.+.++.++.++++++.++|+.|+||+.|.... |.    +..+ ...+||+.+++.|++ |--||+|.+++   
T Consensus       285 iysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSf-ga~GGyiagsk---  360 (519)
T KOG1357|consen  285 IYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSF-GAAGGYIAGSK---  360 (519)
T ss_pred             ceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhc-ccccceecCcH---
Confidence             4555668899999999999999999999999998743 21    1111 125789999999997 56789999998   


Q ss_pred             chhHHHhhhcccccCCCCCCChHHHHHH-HHHHHHHhcC----chHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673          332 LGVELESAINNAVFPGLQGGPHNHTIGG-LAVCLKHAQS----PEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL  406 (529)
Q Consensus       332 ~~~~l~~~i~~~~~p~~~g~p~~~~iaa-la~al~~~~~----~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~  406 (529)
                         ++.+.++...-....++....-+++ ...+++.+..    ...++..+++.+|+++++..|.+.||-+... .|+..
T Consensus       361 ---~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~-~dSpV  436 (519)
T KOG1357|consen  361 ---ELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVYGN-NDSPV  436 (519)
T ss_pred             ---HHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEEecC-CCCCc
Confidence               6777665432111222211111111 1234554442    2347888999999999999999999987754 34543


Q ss_pred             EEEc-cCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          407 VLVD-LRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       407 ~~v~-~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      +.+- ..+.. - .++.+.|.+.+|.+-....|.  .|+..+.+|+...+-    ++.|+++++.+.+.++=
T Consensus       437 vplll~~~~k-~-~~f~r~~l~~nigvVvvgfPa--tpl~e~r~R~c~Sa~----ht~e~ld~~l~~i~~~g  500 (519)
T KOG1357|consen  437 VPLLLYGPAK-I-VAFSREMLERNIGVVVVGFPA--TPLLESRARFCLSAS----HTKEDLDRALEVIDRVG  500 (519)
T ss_pred             ceeeecCccc-c-cHHHHHHHhcCceEEEEeCCC--chHHHhHHHhhhccc----ccHHHHHHHHHHHhhhc
Confidence            3221 22221 2 344545555555443332342  355678889876654    45788888888877654

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.63  E-value=1.3e-13  Score=156.36  Aligned_cols=309  Identities=14%  Similarity=0.113  Sum_probs=189.9

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhh-
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGG--NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI-  188 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g--~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~al-  188 (529)
                      ++|+.|++++.+... .|+. |.+  |..-  ....+.+. ..+..+++++|++.+    |+..+.++ .+..++++++ 
T Consensus       116 ~~P~~v~~~i~~~~~-~~Ta-ytP--YqaEisQG~lqal~-~~Qt~ia~LtG~~~a----naSL~d~aTAaaea~~~a~~  186 (993)
T PLN02414        116 HVPPVILRNILENPG-WYTQ-YTP--YQAEIAQGRLESLL-NYQTMITDLTGLPMS----NASLLDEGTAAAEAMAMCNN  186 (993)
T ss_pred             cCCHHHHHHHHhChH-HHhh-cCC--CchHHHHHHHHHHH-HHHHHHHHHhCCChh----hEeecCChHHHHHHHHHHHh
Confidence            478888788875542 1211 111  1110  01122333 356889999999985    44445544 5566666666 


Q ss_pred             cCCC--CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC-CC
Q 009673          189 LKPH--DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP-RD  265 (529)
Q Consensus       189 l~pG--D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p-~~  265 (529)
                      +++|  |+|++.+..|+.+.....    ......|.  +++.++++.    .|      ...+ ..-.+++.+|++. ..
T Consensus       187 ~~~g~~~~VlVs~~~hP~~~~v~~----t~a~~~Gi--eV~~v~~~~----~~------~~~~-~v~~vlvq~P~~~G~v  249 (993)
T PLN02414        187 ILKGKKKKFLIASNCHPQTIDVCQ----TRADGLGL--EVVVADEKD----FD------YSSG-DVCGVLVQYPATDGEV  249 (993)
T ss_pred             cccCCCCEEEEcCccCHhHHHHHH----HhhhhcCC--EEEEecchh----hc------cccC-ceEEEEEecCCCCeEE
Confidence            5555  789999988876543211    01122343  555554431    11      1111 2223445555544 47


Q ss_pred             CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccc-----cCCCCeEEEeeCCCcchhHHHhh
Q 009673          266 FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSL-----RGPRGGMIFFKKDPVLGVELESA  339 (529)
Q Consensus       266 ~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l-----~GprgG~i~~~~~~~~~~~l~~~  339 (529)
                      .|+++|+++|+++|+++++ +++..++....   .|-+ ++||++++.|||+     +||+.|+++++++      +...
T Consensus       250 ~dv~~I~~~ah~~GaL~iV-aad~lal~~l~---~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~------~~r~  319 (993)
T PLN02414        250 LDYAEFVKNAHANGVKVVM-ATDLLALTMLK---PPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQE------YKRL  319 (993)
T ss_pred             cCHHHHHHHHHHcCCEEEE-EECHHHhcCCC---CHhhccCcEEEECCCccccCCCCCCCCeeEEEECHH------HHhh
Confidence            8999999999999999999 77766655321   1222 8999999999997     7787899999884      3222


Q ss_pred             hc---------ccccCC--------------CCCCChHHHHHHHHHHH-----HHhcCchHHHHHHHHHHHHHHHHHHHH
Q 009673          340 IN---------NAVFPG--------------LQGGPHNHTIGGLAVCL-----KHAQSPEFKVYQNKVVSNCRALASRLV  391 (529)
Q Consensus       340 i~---------~~~~p~--------------~~g~p~~~~iaala~al-----~~~~~~~~~~~~~~i~~~a~~l~~~L~  391 (529)
                      +-         ....++              -.++.+.....++.+++     ..+...+.++..+++..++.++++.|.
T Consensus       320 ~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~  399 (993)
T PLN02414        320 MPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLK  399 (993)
T ss_pred             CCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHh
Confidence            11         000000              13454553333332222     233446678888999999999999998


Q ss_pred             hcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673          392 ELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD  471 (529)
Q Consensus       392 ~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~  471 (529)
                      +.|+++..+ .....+.+.+.    +..++.+.|.++||.++..         ..+.+|++++..+|    ++|++.+++
T Consensus       400 ~~G~~~~~~-~~f~~vt~~~~----~~~~v~~~L~~~gI~l~~~---------~~~~lrvs~~e~~T----~edId~L~~  461 (993)
T PLN02414        400 KLGFQVQSL-PFFDTVKVKCS----DADAIADAAAKVGINLRVV---------DANTVTVSFDETTT----LEDVDKLFK  461 (993)
T ss_pred             hcCCccCCC-CCcCeEEEecC----CHHHHHHHHHHCCCeeEEe---------cCCeEEEEeeccCC----HHHHHHHHH
Confidence            899888654 12223444442    3477888999999987542         13569999988776    799999999


Q ss_pred             HHHH
Q 009673          472 FIHE  475 (529)
Q Consensus       472 ~i~~  475 (529)
                      .|..
T Consensus       462 ~l~~  465 (993)
T PLN02414        462 VFAG  465 (993)
T ss_pred             HHcc
Confidence            9964

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=99.61  E-value=1.8e-13  Score=144.44  Aligned_cols=317  Identities=18%  Similarity=0.129  Sum_probs=186.3

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----  189 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all----  189 (529)
                      -.|.|.+|+...+..-+..   +..+.  ++...++    .++++++++.+.     ....+||++|+..++....    
T Consensus        56 ~~p~v~~A~~~~~~~~~~~---~~~~~--~~~~~~l----a~~l~~~~~~~~-----v~~~~sGseA~e~Alk~ar~~~~  121 (406)
T PRK12381         56 AHPALREALNEQASKFWHT---GNGYT--NEPVLRL----AKKLIDATFADR-----VFFCNSGAEANEAALKLARKYAH  121 (406)
T ss_pred             CCHHHHHHHHHHHhhcccc---cCccC--CHHHHHH----HHHHHhhCCCCe-----EEEcCCcHHHHHHHHHHHHHHHh
Confidence            4788999888777532111   11111  2222222    367777776542     3556899999999887641    


Q ss_pred             ----CCCCEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCC---CCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 009673          190 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDES---TGLVDYDMLEKTAILFRPKLIIAGASA  261 (529)
Q Consensus       190 ----~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~---~~~iD~d~le~~i~~~~pklIi~~~s~  261 (529)
                          .+..+|+..+..|-|... +      .+...+.. +..-.-++.+.   -...|++++++.+++ ++++|++. |.
T Consensus       122 ~~~~~~r~~ii~~~~~yHG~t~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aaviiE-Pv  192 (406)
T PRK12381        122 DRYGSHKSGIVAFKNAFHGRTL-F------TVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDD-QTCAVIVE-PI  192 (406)
T ss_pred             hcCCCCCCeEEEECCCcCCcch-h------HHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccC-CeeEEEEe-CC
Confidence                245688888765433211 1      11112210 00000000000   123588999999976 78888886 44


Q ss_pred             CCC-------CCCHHHHHHHHHHhCCEEEEecccccccccccccCC--CCC-cccEEEecccccc-cCCCCeEEEeeCCC
Q 009673          262 YPR-------DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDP  330 (529)
Q Consensus       262 ~p~-------~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~~-~aDiv~~S~hK~l-~GprgG~i~~~~~~  330 (529)
                      ++.       ...+++|+++|++||+++|+|++| .|+...+....  .+. ..|++  |++|.+ +|++.|++++++  
T Consensus       193 ~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~-tG~gr~G~~~~~~~~~v~pDi~--t~sK~l~gG~~ig~~~~~~--  267 (406)
T PRK12381        193 QGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDVL--TTAKALGGGFPIGAMLTTE--  267 (406)
T ss_pred             cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchh-hCCCCCcchhhhHhhCCCCCEE--EehhhhhCCCceEEEEEcH--
Confidence            432       235889999999999999999997 56533332110  011 24664  677998 677889999987  


Q ss_pred             cchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC--cEEecCC-CCCceE
Q 009673          331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLVSGG-SDNHLV  407 (529)
Q Consensus       331 ~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G--~~v~~~g-t~~~~~  407 (529)
                          ++.+.+.........+++... .++...+++.+..   .+..+++.++.+++.+.|++.+  +.++... ....++
T Consensus       268 ----~~~~~~~~~~~~~t~~~~pl~-~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~  339 (406)
T PRK12381        268 ----KCASVMTVGTHGTTYGGNPLA-SAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLI  339 (406)
T ss_pred             ----HHHhhcCCCCCCCCCCCCHHH-HHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEE
Confidence                677776553333333443333 3333345665533   2456777888888888887743  3222210 112334


Q ss_pred             EEccCCC-CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       408 ~v~~~~~-~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      ++.+... .-....+.+.|.++||.+..    .     .+..|||+.+..    ++++|++++.+.|.+++..
T Consensus       340 ~~~l~~~~~~~~~~~~~~l~~~Gv~v~~----~-----g~~~lRl~p~~~----~t~~~i~~~~~~l~~~l~~  399 (406)
T PRK12381        340 GCVLNAEYAGKAKQISQEAAKAGVMVLI----A-----GPNVVRFAPALN----ISEEEITTGLDRFARACER  399 (406)
T ss_pred             EEEecCchhhHHHHHHHHHHHCCcEEee----C-----CCCEEEEeCCcc----CCHHHHHHHHHHHHHHHHH
Confidence            4444321 01235677888899999842    1     235899986643    4589999999999998864

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.60  E-value=1.9e-13  Score=136.20  Aligned_cols=323  Identities=18%  Similarity=0.208  Sum_probs=201.6

Q ss_pred             cceeEecC-------CCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC-----CCCce
Q 009673          103 KSLELIAS-------ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-----NKWGV  170 (529)
Q Consensus       103 ~~i~L~as-------en~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~-----~~~~~  170 (529)
                      +.|||..+       ..++-+.|.+|-...+.+..+..|      .+-+-.+.+.+.   ..+-+||.++     +.+ +
T Consensus        27 ~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Y------l~i~G~~~f~~~---~~~llFG~d~~~l~~~Rv-~   96 (396)
T COG1448          27 NKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNY------LPIEGLPEFLEA---VQKLLFGADSPALAEDRV-A   96 (396)
T ss_pred             CeeeeeeeeeeCCCCCcchhHHHHHHHHHhhcccccccc------CCcCCcHHHHHH---HHHHhcCCCcHHHHhhhH-h
Confidence            56888642       235568888888766655443333      333333444432   2334688552     333 4


Q ss_pred             eeecCChHHHHHHHHH--hhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc-CCCCCCCCHHHHHHHh
Q 009673          171 NVQPLSGSPANFEVYT--AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTA  247 (529)
Q Consensus       171 ~V~~~sGs~A~~~~l~--all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v-~~~~~~iD~d~le~~i  247 (529)
                      .+|..+||.|+..+-.  .-..|..+|.+++|+++.|..          -+...++++..|++ |.++..+|++.+.+.+
T Consensus        97 t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~----------If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L  166 (396)
T COG1448          97 TVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKA----------IFEAAGLEVETYPYYDAETKGLDFDGMLADL  166 (396)
T ss_pred             heecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHH----------HHHhcCCceeeeeccccccccccHHHHHHHH
Confidence            6899999988876543  335688889999999988742          12333457766665 5567789999988777


Q ss_pred             hhcCC-cEEEEc-CCCCCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccccC--CCC----C-cc-cEEEecc
Q 009673          248 ILFRP-KLIIAG-ASAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPF----K-YC-DVVTTTT  312 (529)
Q Consensus       248 ~~~~p-klIi~~-~s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~----~-~a-Div~~S~  312 (529)
                      +.... .+|++. ..+||+     ...|++|.++.++.|.+.+.|.| |-|+-.+ ...  ..+    . +. =+|++|+
T Consensus       167 ~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~A-YQGF~~G-leeDa~~lR~~a~~~~~~lva~S~  244 (396)
T COG1448         167 KTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIA-YQGFADG-LEEDAYALRLFAEVGPELLVASSF  244 (396)
T ss_pred             HhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehh-hhhhccc-hHHHHHHHHHHHHhCCcEEEEehh
Confidence            65333 355554 557777     23588999999999999999998 5554322 110  011    0 12 2788999


Q ss_pred             cccc--cCCCCeE-EEeeCCCcchhHHHhhh----cccccCCCCCCChHHHHHHHHHHH-----HHhcCchHHHHHHHHH
Q 009673          313 HKSL--RGPRGGM-IFFKKDPVLGVELESAI----NNAVFPGLQGGPHNHTIGGLAVCL-----KHAQSPEFKVYQNKVV  380 (529)
Q Consensus       313 hK~l--~GprgG~-i~~~~~~~~~~~l~~~i----~~~~~p~~~g~p~~~~iaala~al-----~~~~~~~~~~~~~~i~  380 (529)
                      +|+|  .|-|.|. .++..+.    +...++    ... ....+++|..+...-.+..|     +..-..+...+++++.
T Consensus       245 SKnfgLYgERVGa~~vva~~~----~~a~~v~sqlk~~-iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~  319 (396)
T COG1448         245 SKNFGLYGERVGALSVVAEDA----EEADRVLSQLKAI-IRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRIL  319 (396)
T ss_pred             hhhhhhhhhccceeEEEeCCH----HHHHHHHHHHHHH-HHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence            9986  6788754 4443321    222222    221 22334566655544333332     2221234577889999


Q ss_pred             HHHHHHHHHHHhcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCC
Q 009673          381 SNCRALASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAM  456 (529)
Q Consensus       381 ~~a~~l~~~L~~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~  456 (529)
                      +.+..|.+.|++.|    |..+..  ...++.  .  .|.+.+++.++.+++||.+..            +| ||++.  
T Consensus       320 ~mR~~lv~~L~~~~~~~~f~~i~~--Q~GMFs--y--~Gls~~QV~rLree~~IY~v~------------sG-Ri~va--  378 (396)
T COG1448         320 EMRQALVDALKALGAPRNFDFIIS--QRGMFS--Y--TGLSPEQVDRLREEFGIYLVA------------SG-RINVA--  378 (396)
T ss_pred             HHHHHHHHHHHhhCCCcccchHhh--cCceee--c--CCCCHHHHHHHHHhccEEEec------------CC-eeeec--
Confidence            99999999998833    444432  122222  2  267889999999999999832            22 88765  


Q ss_pred             ccCCCCHHHHHHHHHHHHHH
Q 009673          457 TTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       457 tt~g~~~~d~~~la~~i~~~  476 (529)
                         |+++..++++++.|.++
T Consensus       379 ---Gl~~~ni~~va~ai~~v  395 (396)
T COG1448         379 ---GLNTSNIDYVAKAIAAV  395 (396)
T ss_pred             ---cCChhhHHHHHHHHHhh
Confidence               46679999999999875

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=99.59  E-value=7.8e-13  Score=138.17  Aligned_cols=307  Identities=14%  Similarity=0.120  Sum_probs=173.0

Q ss_pred             cHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cCCC
Q 009673          115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH  192 (529)
Q Consensus       115 ~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~pG  192 (529)
                      .|+|++|+...+...+  +++. .+      ...++    ..+++.+....+.  ..+...||++||..++...  ...+
T Consensus        46 ~p~v~~a~~~~~~~~~--~~~~-~~------~~~~~----~~la~~l~~~~~~--~~~~~~SGseA~~~Al~~ar~~~~~  110 (375)
T PRK04260         46 HPQVQQALQKQAGLIW--HSPN-LY------LNSLQ----EEVAQKLIGDKDY--LAFFCNSGAEANEAAIKIARKATGK  110 (375)
T ss_pred             CHHHHHHHHHHHHhcC--cccC-cc------CCHHH----HHHHHHHhcCcCC--EEEEcCccHHHHHHHHHHHHHhcCC
Confidence            6789999887764321  1221 11      12233    2333333222221  2245688999999888765  2456


Q ss_pred             CEEEEcCCCCCccccccccccccccccccce-----EEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--C
Q 009673          193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--D  265 (529)
Q Consensus       193 D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-----~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~  265 (529)
                      ++|++.+..+-|.....       +...+..     +.. .++........|++++++.+.+ ++.+|++...++++  .
T Consensus       111 ~~vv~~~~~yHg~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~dl~~l~~~l~~-~~a~vi~e~v~~~~G~~  181 (375)
T PRK04260        111 QEIITFQNSFHGRTFGS-------MSATGQDKIKDGFGD-GVPHFSYAIFNDLNSVKALVNK-NTAAVMLELVQGESGVL  181 (375)
T ss_pred             CeEEEECCCcCcccHHH-------HhccCCcccCCCCCC-CCCCeEEeCCCCHHHHHHhcCC-CeEEEEECCeECCCCCc
Confidence            78888776543221111       1111110     000 0000000012488999988865 67788877544332  2


Q ss_pred             C----CHHHHHHHHHHhCCEEEEecccccccccccccCC--CCC-cccEEEeccccccc-CCCCeEEEeeCCCcchhHHH
Q 009673          266 F----DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELE  337 (529)
Q Consensus       266 ~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~~-~aDiv~~S~hK~l~-GprgG~i~~~~~~~~~~~l~  337 (529)
                      .    .++++.++|+++|+++++|++|. |+...+....  -.. ..|++  |++|.|+ |.+.|++++++      ++.
T Consensus       182 ~~~~~~l~~~~~l~~~~~~~~i~De~~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~------~~~  252 (375)
T PRK04260        182 PADKDFVKALADYCQETGILLIVDEVQT-GMGRTGKLYAFEHYGIEPDIF--TLAKGLANGVPVGAMLAKS------SLG  252 (375)
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccchhhhHhhCCCCCEE--EecccccCCcceEEEEEcH------HHH
Confidence            2    28999999999999999999974 6533331111  011 24655  6789995 67889999987      676


Q ss_pred             hhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cC-cEEecCCCCCceEEEccC
Q 009673          338 SAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LG-YKLVSGGSDNHLVLVDLR  412 (529)
Q Consensus       338 ~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G-~~v~~~gt~~~~~~v~~~  412 (529)
                      +.+.........+++.. ..++....++....+   ++.+++.++.+.+.+.|.+    .+ +..+.+  ...++++.+.
T Consensus       253 ~~~~~~~~~~t~~~~~~-~~~aa~a~l~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~g~~~~~~~~  326 (375)
T PRK04260        253 GAFGYGSHGSTFGGNKL-SMAAASATLDIMLTA---GFLEQALENGNYLQEQLQKALQDKETVTTVRG--LGYMIGIETT  326 (375)
T ss_pred             hhcCCCCCCCCCCcCHH-HHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHhhCCCeeEEec--cceEEEEEec
Confidence            66654322223333333 333333456554332   3445555555555555544    32 222222  2345566653


Q ss_pred             CCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          413 PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       413 ~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                         .+...+.+.|.+.||.+.    |.     ..+.+|++.+..    ++++|++++++.|+++
T Consensus       327 ---~~~~~~~~~l~~~Gi~v~----~~-----~~~~lR~~~~~~----~t~~~i~~~l~~l~~~  374 (375)
T PRK04260        327 ---ADLSQLVEAARDKGLIVL----TA-----GTNVIRLLPPLT----LTKEEIEQGIAILSEV  374 (375)
T ss_pred             ---CcHHHHHHHHHhCCCEEe----cC-----CCCEEEEcCCCc----cCHHHHHHHHHHHHHh
Confidence               245678888889999983    32     247899987543    5689999999998765

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=99.59  E-value=5.9e-16  Score=154.84  Aligned_cols=252  Identities=20%  Similarity=0.229  Sum_probs=161.9

Q ss_pred             CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc
Q 009673          110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL  189 (529)
Q Consensus       110 sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all  189 (529)
                      |+| ..|+++++|....     .|..   .|++.++..++|    ++++++||.+..     +.+.+|+.||..++.+++
T Consensus         4 SD~-~~~~m~~a~~~a~-----~gd~---~Yg~D~~~~~l~----~~i~~l~g~e~a-----~f~~sGT~An~~al~~~~   65 (290)
T PF01212_consen    4 SDT-PTPAMLEAMAAAN-----VGDD---AYGEDPTTARLE----ERIAELFGKEAA-----LFVPSGTMANQLALRAHL   65 (290)
T ss_dssp             -SS-S-HHEEHHHHHTT-----SB-C---CTTSSHHHHHHH----HHHHHHHTSSEE-----EEESSHHHHHHHHHHHHH
T ss_pred             ccC-CCHHHHHHHHccc-----cCCc---ccCCChhHHHHH----HHHHHHcCCCEE-----EEeCCCChHHHHHHHHHH
Confidence            566 7899999995432     1222   377788888888    778899999863     456899999999999999


Q ss_pred             CCCCEEEEcCCCCCcccccccccccccc-ccccceEEEEEcccCCCCCCCCHHHHHHHhhh-----cCCcEEEEcCCCC-
Q 009673          190 KPHDRIMGLDLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-----FRPKLIIAGASAY-  262 (529)
Q Consensus       190 ~pGD~Vl~~~~~~~g~~s~g~~~~~~~i-~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~-----~~pklIi~~~s~~-  262 (529)
                      +|++.|++.+..|   +   +......+ .+.|.  ++++++-+ +++.+|+++|++.+..     .+|++|.+..+++ 
T Consensus        66 ~~~~~vi~~~~aH---i---~~~E~ga~~~~~G~--~~~~l~~~-~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~  136 (290)
T PF01212_consen   66 RPGESVICADTAH---I---HFDETGAIEELSGA--KLIPLPSD-DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTEL  136 (290)
T ss_dssp             HTTEEEEEETTEH---H---HHSSTTHHHHHTTC--EEEEEBEC-TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTT
T ss_pred             hcCCceeccccce---e---eeeccchhhHhcCc--EEEECCCc-ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcC
Confidence            9999999887643   2   11111222 34554  66676543 2389999999999987     3578999987766 


Q ss_pred             --CCCC---CHHHHHHHHHHhCCEEEEecccccccc-cccccCCC-CCcccEEEecccccccCCCCeEEEeeCCCcchhH
Q 009673          263 --PRDF---DYPRMRQIADAVGALLMMDMAHISGLV-AASVVADP-FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVE  335 (529)
Q Consensus       263 --p~~~---d~~~i~~ia~~~g~~livD~ah~~Gli-~~~~~~~~-~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~  335 (529)
                        ++..   ++++|.++|++||++|+.|+|-..... ..+..... ..++|++++|++|.+..|-|+++++++      +
T Consensus       137 ~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~Gavl~~~~------~  210 (290)
T PF01212_consen  137 AGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPGGAVLAGNK------E  210 (290)
T ss_dssp             TTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSSEEEEEESH------H
T ss_pred             CCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEcccccccceEEEech------H
Confidence              3444   567788889999999999988543221 11111111 137999999999999888889999998      5


Q ss_pred             HHhhhccc--ccCC--CCCCChHHHHHH----HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC
Q 009673          336 LESAINNA--VFPG--LQGGPHNHTIGG----LAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG  400 (529)
Q Consensus       336 l~~~i~~~--~~p~--~~g~p~~~~iaa----la~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~  400 (529)
                      +.++....  .+.+  .+.+    .+++    ...++...  +.+.....+..++++.|.+.|+..|+.+..+
T Consensus       211 ~i~~~~~~~k~~gg~~~~~G----~~~a~~~~~~~~l~~l--~~~~~~~~~~~~~A~~La~~l~~~~~~~~~~  277 (290)
T PF01212_consen  211 FIAKARRQRKRLGGGMRQAG----VLAAAELYQFAALRAL--ELWLERARHANAMAKRLAAGLEALGGVLPRP  277 (290)
T ss_dssp             HHHHHHHHHHHHTHHHHHTT----HHHHHHHHHHHHHCHE--ECSHHHHHCHHHHHHCHHHCHHEECEEEETT
T ss_pred             HHHHHHHHHHHhccCeeecc----eeeeechhhHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence            43321111  1110  0111    1222    01122222  2235666777888999999999888876654

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=99.59  E-value=1.7e-12  Score=137.90  Aligned_cols=324  Identities=15%  Similarity=0.093  Sum_probs=177.3

Q ss_pred             cceeEecCC-----CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673          103 KSLELIASE-----NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG  177 (529)
Q Consensus       103 ~~i~L~ase-----n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG  177 (529)
                      ..|++..+-     .+.+|+|.+|+...+.+..       .|...++...+    .++++++.+.... .   .+..+||
T Consensus        49 ~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-------~~~~~~~~~~~----lae~l~~~~~~~~-~---v~~~~sG  113 (423)
T TIGR00713        49 EYIDYVLSWGPLILGHAHPRVVEAVKEALERGT-------SYGAPTEAEIL----LAKEIISRVPSVE-M---VRFVNSG  113 (423)
T ss_pred             EEEEccccccccccCCCCHHHHHHHHHHHHhCC-------cCCCCCHHHHH----HHHHHHHhCCccc-E---EEEeCCH
Confidence            346665432     2568999999988775421       11111222222    3366667665432 1   2446888


Q ss_pred             HHHHHHHHHhh--cCCCCEEEEcCCCCCccccccccccccccccccce---------------EEEEEcccCCCCCCCCH
Q 009673          178 SPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY---------------FESMPYRLDESTGLVDY  240 (529)
Q Consensus       178 s~A~~~~l~al--l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~---------------~~~v~~~v~~~~~~iD~  240 (529)
                      ++|+..++...  ....++|+..++.|-|+.. +.    ......+..               ...+.++      ..|+
T Consensus       114 seA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~  182 (423)
T TIGR00713       114 TEATMSAVRLARGYTGRDKIIKFEGCYHGHHD-AL----LVKAGSGAATLGLPTSPGVPEDFAKLTLVLP------YNDL  182 (423)
T ss_pred             HHHHHHHHHHHHHhhCCCEEEEEcCCCCCChh-hh----hccccCcccccCCCCCCCCCcccccceEEeC------CCCH
Confidence            99999888753  2346899999887644310 00    000000000               0011111      1389


Q ss_pred             HHHHHHhhh--cCCcEEEEc-CCCCCC-CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-CCCCC-cccEEEe
Q 009673          241 DMLEKTAIL--FRPKLIIAG-ASAYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK-YCDVVTT  310 (529)
Q Consensus       241 d~le~~i~~--~~pklIi~~-~s~~p~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~~~~-~aDiv~~  310 (529)
                      +++++.++.  .++++|++. .+++++ ..+    +++|+++|++||+++|+|++| .|+...... ...+. ..|++  
T Consensus       183 ~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~-~g~r~g~~~~~~~~~~~pDi~--  259 (423)
T TIGR00713       183 EALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVM-TGFRVALGGAQEYFGVEPDLT--  259 (423)
T ss_pred             HHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccc-cccccCcchhHHHhCCCcchh--
Confidence            999998874  256778775 444444 322    789999999999999999996 555321110 00111 24655  


Q ss_pred             cccccc-cCCCCeEEEeeCCCcchhHHHhhhccc---ccCCCCCCChHHHHHHHHHHHHHhcCchH-HHHHHHHHHHHHH
Q 009673          311 TTHKSL-RGPRGGMIFFKKDPVLGVELESAINNA---VFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRA  385 (529)
Q Consensus       311 S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~---~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~~a~~  385 (529)
                      +++|.+ +|+|.|++++++      ++.+.+...   ......+++.....+++ ++|+.+...++ ....+.....++.
T Consensus       260 t~sK~l~~G~pig~v~~~~------~i~~~~~~~~~~~~~~T~~~~~~~~aaa~-a~l~~~~~~~~~~~~~~~~~~~~~~  332 (423)
T TIGR00713       260 TLGKIIGGGLPVGAFGGRR------EIMERLAPEGPVYQAGTLSGNPLAMAAGL-ATLKLLDEEGVYTELDELAKRLAEG  332 (423)
T ss_pred             hhhhhhcCCCceeeeeEHH------HHHHhhCcCCCeeeccCCCCCHHHHHHHH-HHHHHHhcccHHHHHHHHHHHHHHH
Confidence            578998 568899999988      677776531   12223344444444443 46776554333 2333333333344


Q ss_pred             HHHHHHhcCcEEecCCCCCceEEEccCCCC---------CcH---HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEcc
Q 009673          386 LASRLVELGYKLVSGGSDNHLVLVDLRPMG---------IDG---ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS  453 (529)
Q Consensus       386 l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~---------i~~---~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~  453 (529)
                      |.+.+.+.++.....+. ..++.+.+....         .+.   ..+.+.|.++||.+...         ..+.+|++.
T Consensus       333 l~~~~~~~~~~~~v~~~-g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~---------~~~~~~l~~  402 (423)
T TIGR00713       333 LSEVLEDTGIPHTVNRV-GSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPS---------QFEACFLSA  402 (423)
T ss_pred             HHHHHHhcCCCeEEEee-ccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecC---------CccceeeEC
Confidence            44445555654321111 122222221110         112   24556676799998431         113478764


Q ss_pred             CCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          454 PAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       454 ~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +      ++++|++++.+.|.+++.
T Consensus       403 ~------~t~~~i~~~~~~l~~~l~  421 (423)
T TIGR00713       403 A------HTEEDIENTIEAAEEVFA  421 (423)
T ss_pred             C------CCHHHHHHHHHHHHHHHh
Confidence            3      468999999999988775

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=99.58  E-value=6.1e-13  Score=132.04  Aligned_cols=246  Identities=18%  Similarity=0.262  Sum_probs=138.1

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCC-CC---------Cccccccccccc
Q 009673          145 YIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDL-PH---------GGHLSHGFMTPK  214 (529)
Q Consensus       145 ~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~-~~---------~g~~s~g~~~~~  214 (529)
                      -.|.+|    +-+++.||++.+-  |..|..|||+|+..++.++++|||+++...- +|         .+. ..|     
T Consensus        55 GRd~le----~iyA~vfgaE~AL--VRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~-~~G-----  122 (403)
T PF06838_consen   55 GRDKLE----RIYADVFGAEDAL--VRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGN-GPG-----  122 (403)
T ss_dssp             HHHHHH----HHHHHHCT-SEEE--EETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSS-SSS-----
T ss_pred             cHHHHH----HHHHHHhCchhhh--hcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCC-CCC-----
Confidence            456666    6789999999752  5677789999999999999999999997541 22         111 111     


Q ss_pred             cccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC-CCCCC--CC---CHHHHHHHHHHh--CCEEEEec
Q 009673          215 RRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA-SAYPR--DF---DYPRMRQIADAV--GALLMMDM  286 (529)
Q Consensus       215 ~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~-s~~p~--~~---d~~~i~~ia~~~--g~~livD~  286 (529)
                       .+.-.|.  ....+++. +++.+|+|.+++.+++ ++|+|.+.- -.|..  ..   +++++.++.|+.  ++++++|.
T Consensus       123 -SL~e~Gi--~Y~~v~L~-~dg~~D~~~i~~~~~~-~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDN  197 (403)
T PF06838_consen  123 -SLKEFGI--KYREVPLT-EDGTIDWEAIKKALKP-NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDN  197 (403)
T ss_dssp             -STGGGT---EEEE--B--TTSSB-HHHHHHHHHT-TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-
T ss_pred             -ChHHhCc--eeEEEeec-CCCCcCHHHHHHhhcc-CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeC
Confidence             1222344  33445565 4689999999999997 899999873 34543  23   455555555554  78999999


Q ss_pred             ccccccccccccCCCCC-cccEEEecccccccC---CCCeEEEeeCCCcchhHHHhhh-cccccCCCCC--CChHHHHHH
Q 009673          287 AHISGLVAASVVADPFK-YCDVVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAI-NNAVFPGLQG--GPHNHTIGG  359 (529)
Q Consensus       287 ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~G---prgG~i~~~~~~~~~~~l~~~i-~~~~~p~~~g--~p~~~~iaa  359 (529)
                      ++. .++-   ...|.. ++|++.+|+-|...|   |-||+|++++      ++.++. .+...||+..  ++.....-.
T Consensus       198 CYG-EFvE---~~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~------~lVe~~a~RLTaPGiG~e~G~t~~~~R~  267 (403)
T PF06838_consen  198 CYG-EFVE---TQEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRK------DLVERAAYRLTAPGIGKEVGATLGTNRL  267 (403)
T ss_dssp             TTT-TTTS---SS-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESH------HHHHHHHHHHS-TTTGGGSS--TTTHHH
T ss_pred             Ccc-eecc---ccCccccchhheeccceeCCCCCccCcCCEEechH------HHHHHHHhhhcCCccccccccCcchHHH
Confidence            842 2221   223444 899999999999854   7889999998      777765 3344566521  111111110


Q ss_pred             HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce---EEEccCCCCCcHHHHHHhHh
Q 009673          360 LAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL---VLVDLRPMGIDGARVEKILD  426 (529)
Q Consensus       360 la~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~---~~v~~~~~~i~~~~~~~~L~  426 (529)
                      +.-.|=  ..   ...+.+..+-+...+..++++|+++.+...+...   -.+.+.    +.+.+...++
T Consensus       268 ~~QGlF--lA---P~vV~eAlKgaif~A~~fe~lG~~v~P~~~~~R~DiIQai~l~----~~e~l~~FC~  328 (403)
T PF06838_consen  268 MFQGLF--LA---PHVVGEALKGAIFAAALFEKLGFEVSPKPDDPRSDIIQAIELG----SPEKLIAFCQ  328 (403)
T ss_dssp             HHHHHH--HH---HHHHHHHHHHHHHHHHHHHHTT-EEES-TTS--SSS-EEEE-S----SHHHHHHHHH
T ss_pred             HHhHHh--hc---hHHHHHHHHHHHHHHHHHHHcCCcCCCCCCCCCCceEEEEECC----CHHHHHHHHH
Confidence            000110  00   3445556666776777778899999874333221   233333    4566666554

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.57  E-value=4.7e-13  Score=152.60  Aligned_cols=273  Identities=16%  Similarity=0.105  Sum_probs=175.9

Q ss_pred             HHHHHHHHcCCCCCCCceeeecCCh-HHHHHHHHHhh-cCCC--CEEEEcCCCCCccccccccccccccccccceEEEEE
Q 009673          153 CQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAI-LKPH--DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP  228 (529)
Q Consensus       153 a~~~la~~~g~~~~~~~~~V~~~sG-s~A~~~~l~al-l~pG--D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~  228 (529)
                      .+..+++++|++..    |+..+.+ |.+..++++++ .++|  |+|++.+..|+.......    ......|  ++++.
T Consensus       126 ~Qt~la~LtG~~~a----naSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~----t~a~~~G--~ev~~  195 (954)
T PRK05367        126 FQTMVADLTGLEIA----NASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLR----TRAEPLG--IEVVV  195 (954)
T ss_pred             HHHHHHHHHCCChh----hccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHH----HHHHhCC--CEEEE
Confidence            56889999999975    3444444 45555666666 4554  999999988866542110    0112234  46666


Q ss_pred             cccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-ccc
Q 009673          229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD  306 (529)
Q Consensus       229 ~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aD  306 (529)
                      ++.+.     |.+      .+ ++..+++.+|++.+ ..|+++|+++|+++|+++++|+.+.+..+.    ..|-+ ++|
T Consensus       196 ~~~~~-----d~~------~~-~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l----~~pge~GaD  259 (954)
T PRK05367        196 GDAAK-----ALD------HD-DVFGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLL----TPPGEMGAD  259 (954)
T ss_pred             ecCcc-----CCC------cc-cEEEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCC----CChhhcCCC
Confidence            55532     111      11 34455565665554 779999999999999999999876443321    22333 899


Q ss_pred             EEEeccccc-----ccCCCCeEEEeeCCCcchhHHHhhhccc------------cc-----------CCCCCCChHHH--
Q 009673          307 VVTTTTHKS-----LRGPRGGMIFFKKDPVLGVELESAINNA------------VF-----------PGLQGGPHNHT--  356 (529)
Q Consensus       307 iv~~S~hK~-----l~GprgG~i~~~~~~~~~~~l~~~i~~~------------~~-----------p~~~g~p~~~~--  356 (529)
                      |+++++|||     ++||..|+++++++      +.+.+...            .+           ....++.+...  
T Consensus       260 i~vgs~qkfg~P~g~GGP~aGflavr~~------~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~q  333 (954)
T PRK05367        260 IAVGSAQRFGVPMGFGGPHAAYFAVRDA------YKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQ  333 (954)
T ss_pred             EEEeeCcccCCCCCCCCCCEEEEEECHH------HHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHH
Confidence            999999999     67886799999883      33322100            00           00123333221  


Q ss_pred             -HHHHHHH--HHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEc
Q 009673          357 -IGGLAVC--LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN  433 (529)
Q Consensus       357 -iaala~a--l~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~  433 (529)
                       +.++.++  +..+...++++..+++..++.++++.|.+.|+++..+. ....+.+.+.   .+..++.+.|.++||.+.
T Consensus       334 aL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~-~f~~~~~~~~---~~~~~i~~~l~~~gi~~~  409 (954)
T PRK05367        334 VLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHDS-FFDTLTVEVG---GDAAAVLARALAAGINLR  409 (954)
T ss_pred             HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCC-CCCeEEEeCC---CCHHHHHHHHHHCCceec
Confidence             2222222  23444567788899999999999999988899876542 1122334432   356889999999999984


Q ss_pred             CCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673          434 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH  474 (529)
Q Consensus       434 ~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~  474 (529)
                      ..         ..+.+||+....+|    ++|++.+++.|.
T Consensus       410 ~~---------~~~~l~is~~e~~t----~~did~l~~~l~  437 (954)
T PRK05367        410 RV---------DDDHVGISLDETTT----REDLAALLAVFG  437 (954)
T ss_pred             cc---------cCCEEEEEecccCC----HHHHHHHHHHHc
Confidence            31         24679999887765    899999999997

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=99.57  E-value=2e-13  Score=135.05  Aligned_cols=165  Identities=22%  Similarity=0.167  Sum_probs=122.1

Q ss_pred             CCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccc
Q 009673          133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT  212 (529)
Q Consensus       133 G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~  212 (529)
                      ||.-+|.  .|+..+.+|    +|++.+=|--.     -+.+.||..|...++..++++||.|+..+--|||.+.--.. 
T Consensus        53 G~iYsRi--~NPT~~vlE----~RiAaLEGG~a-----a~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~-  120 (426)
T COG2873          53 GNIYTRI--MNPTTDVLE----ERIAALEGGVA-----ALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSH-  120 (426)
T ss_pred             Cceeeec--cCchHHHHH----HHHHHhhcchh-----hhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHH-
Confidence            4444443  466778888    67777665543     24558999999999999999999999988878876432110 


Q ss_pred             cccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccc
Q 009673          213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHIS  290 (529)
Q Consensus       213 ~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~  290 (529)
                         .....|.  ++..++      ..|+|.+++.|++ ++|+|++..-.||.  ..|+++|.+||+++|+++|+|.+-..
T Consensus       121 ---tl~~~Gi--~v~fvd------~~d~~~~~~aI~~-nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~at  188 (426)
T COG2873         121 ---TLKRLGI--EVRFVD------PDDPENFEAAIDE-NTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFAT  188 (426)
T ss_pred             ---HHHhcCc--EEEEeC------CCCHHHHHHHhCc-ccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCc
Confidence               1122343  555543      3469999999999 99999999888887  78999999999999999999987332


Q ss_pred             ccccccccCCCCC-cccEEEecccccccCCC---CeEEEe
Q 009673          291 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFF  326 (529)
Q Consensus       291 Gli~~~~~~~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~  326 (529)
                      .     ..-.|++ ++|||+.|++||+.|-.   ||+|+-
T Consensus       189 p-----yl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD  223 (426)
T COG2873         189 P-----YLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVD  223 (426)
T ss_pred             c-----eecchhhcCCCEEEEeecccccCCccccceEEEe
Confidence            2     2345777 89999999999996632   355543

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.55  E-value=3.7e-12  Score=129.11  Aligned_cols=330  Identities=19%  Similarity=0.195  Sum_probs=192.9

Q ss_pred             cceeEecCC---C--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673          103 KSLELIASE---N--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG  177 (529)
Q Consensus       103 ~~i~L~ase---n--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG  177 (529)
                      ..|++.++-   |  --+|.+.+|+...+..-+-   .+.-|+.     +..+++ .+++.++.+ ..+   -....+||
T Consensus        43 ~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h---~sn~~~~-----~~~~~l-a~~L~~~s~-~~d---~vff~NSG  109 (404)
T COG4992          43 EYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWH---VSNLFYN-----EPQAEL-AEKLVELSP-FAD---RVFFCNSG  109 (404)
T ss_pred             EeeeeccceeeeccCCCCHHHHHHHHHHHHHhhh---cccccCC-----hHHHHH-HHHHHhhCc-ccc---EEEEcCCc
Confidence            457766532   2  2479999999876643331   1111221     222323 367777776 333   23567899


Q ss_pred             HHHHHHHHHhh---cC-CC-CEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCC---CCCCHHHHHHHhh
Q 009673          178 SPANFEVYTAI---LK-PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAI  248 (529)
Q Consensus       178 s~A~~~~l~al---l~-pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~~---~~iD~d~le~~i~  248 (529)
                      ++||.+++..-   .. |+ -+|+...-.+-|. |.+      .+++.+.. +.--..|+-+.-   -.-|+++++++++
T Consensus       110 aEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGR-T~g------alS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~  182 (404)
T COG4992         110 AEANEAALKLARKYTGDPEKSKIIAFENSFHGR-TLG------ALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAID  182 (404)
T ss_pred             HHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCc-cce------eeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhc
Confidence            99999988654   22 22 3777776554332 111      23333321 111111222111   1348999999999


Q ss_pred             hcCCcEEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccc-cCC-CCC-cccEEEeccccccc-C
Q 009673          249 LFRPKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VAD-PFK-YCDVVTTTTHKSLR-G  318 (529)
Q Consensus       249 ~~~pklIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~-~~~-~aDiv~~S~hK~l~-G  318 (529)
                      + ++.+|++..- .-++     ..-+++++++|++||+++|.|+.|. |+--.|. ... -.. ..||++..  |.|. |
T Consensus       183 ~-~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQt-G~GRTGk~fA~e~~gV~PDI~tla--K~LgGG  258 (404)
T COG4992         183 E-DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQT-GLGRTGKLFAYEHYGVEPDILTLA--KALGGG  258 (404)
T ss_pred             c-CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEecccc-CCCccchHHHHHHhCCCCCEEEee--ccccCC
Confidence            8 8888888632 1222     2237899999999999999999974 4322221 000 001 25888866  9994 4


Q ss_pred             CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcE
Q 009673          319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYK  396 (529)
Q Consensus       319 prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~  396 (529)
                      .+.|.++.++      ++.+.+....-..+.|+... ..++..++++.+.+++   ..+++.+..++|.+.|++.  .++
T Consensus       259 ~PigA~la~~------~~~~~~~~G~HgSTfGGNpL-acAv~~a~l~~l~~e~---ll~~v~~~g~~~~~~L~~l~~~~~  328 (404)
T COG4992         259 FPIGAMLATE------EIASAFTPGDHGSTFGGNPL-ACAVALAVLEVLLEEG---LLENVREKGEYLLQRLRELKRRYP  328 (404)
T ss_pred             ccceeeEEch------hhhhcCCCCcccCCCCcCHH-HHHHHHHHHHHHcchh---HHHHHHHHHHHHHHHHHHHhhcCC
Confidence            5557777765      55555544333333455333 3443344677776544   4566777788888888873  444


Q ss_pred             EecCCC-CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          397 LVSGGS-DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       397 v~~~gt-~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      ++..-. ..-++=+.+... .....+.+.|.+.|+.+...         .+..||+.-| ++   ++++|+++..+.+.+
T Consensus       329 ~v~~vRG~GLmiGiel~~~-~~a~~~~~~~~~~gvL~~~a---------~~~ViR~~Pp-L~---i~~eei~~~~~~l~~  394 (404)
T COG4992         329 LVKEVRGRGLMIGIELKEP-YRARDIVRALREEGVLVLPA---------GPNVIRFLPP-LV---ITEEEIDEALDALER  394 (404)
T ss_pred             ceeeeecceeEEEEEecCc-ccHHHHHHHHHHCCeEEecC---------CCCeEEecCC-cc---CCHHHHHHHHHHHHH
Confidence            443211 122222344332 13577888899999998532         2468999644 44   679999999999999


Q ss_pred             HHHHH
Q 009673          476 GVEIT  480 (529)
Q Consensus       476 ~~~~~  480 (529)
                      ++...
T Consensus       395 ~l~~~  399 (404)
T COG4992         395 ALAAA  399 (404)
T ss_pred             HHHHh
Confidence            98754

>PLN02624 ornithine-delta-aminotransferase

Probab=99.53  E-value=9e-12  Score=133.78  Aligned_cols=318  Identities=17%  Similarity=0.146  Sum_probs=174.9

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK---  190 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~---  190 (529)
                      -.|.|.+|+...+.. +..+.+  ++.  ++...++    .+.++++++.+.     .+..+||++|+..++.....   
T Consensus        92 ~~p~v~~ai~~ql~~-~~~~~~--~~~--~~~~~~l----a~~L~~~~~~~~-----~~f~~SGseA~e~AlklAr~~~~  157 (474)
T PLN02624         92 CHPKIIKALTEQAEK-LTLSSR--AFY--NDKFPEF----AEYLTSMFGYDM-----VLPMNTGAEGVETAIKLARKWGY  157 (474)
T ss_pred             CCHHHHHHHHHHHHh-cCCccc--ccC--CHHHHHH----HHHHHhhcCCCe-----EEEeCChHHHHHHHHHHHHHHHH
Confidence            389999999988753 332221  222  2222223    366778887553     24469999999988863321   


Q ss_pred             -----C-CC-EEEEcCCCCCccccccccccccccccccceEEEEEc-ccCCCC---CCCCHHHHHHHhhhc--CCcEEEE
Q 009673          191 -----P-HD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDEST---GLVDYDMLEKTAILF--RPKLIIA  257 (529)
Q Consensus       191 -----p-GD-~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~-~v~~~~---~~iD~d~le~~i~~~--~pklIi~  257 (529)
                           + |+ +|+...-.|     ||....  .++..+.......+ +..+..   ...|++.+++.++..  ++.+|++
T Consensus       158 ~~~g~~~~~~~ii~~~~~y-----HG~t~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiii  230 (474)
T PLN02624        158 EKKGIPKNEAIIVSCCGCF-----HGRTLA--AISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLF  230 (474)
T ss_pred             hhcCCCCCCcEEEEECCCc-----CCCCHH--HhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEE
Confidence                 2 33 455554222     332110  11111110000000 000000   013788999888642  4567888


Q ss_pred             cCCCCCC--CCC----HHHHHHHHHHhCCEEEEecccccccccccc-cCCC-CC-cccEEEecccccccC--CCCeEEEe
Q 009673          258 GASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASV-VADP-FK-YCDVVTTTTHKSLRG--PRGGMIFF  326 (529)
Q Consensus       258 ~~s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~-~~-~aDiv~~S~hK~l~G--prgG~i~~  326 (529)
                      ....+++  ..+    +++|+++|++||+++|+|++|. |+...|. .... .. ..|+++.  +|.++|  ++.|++++
T Consensus       231 Epv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G~GrtG~~~a~~~~~i~pDiv~l--sK~lggG~~pigav~~  307 (474)
T PLN02624        231 EPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT-GLARTGKMLACDWEEVRPDVVIL--GKALGGGVIPVSAVLA  307 (474)
T ss_pred             CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CcCcCcchhhHHhcCCCCCEEEe--cccccCCCCcceeeee
Confidence            7555443  344    9999999999999999999975 5432221 1100 01 3577775  599854  57888888


Q ss_pred             eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC--cE----EecC
Q 009673          327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YK----LVSG  400 (529)
Q Consensus       327 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G--~~----v~~~  400 (529)
                      ++      ++.+.+.........+++.....++ .++|+.+...+   ..++..++.+.+.+.|.+..  +.    .+.+
T Consensus       308 ~~------~i~~~~~~~~~~~T~~g~pl~~aaa-~aaLe~l~~~~---l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg  377 (474)
T PLN02624        308 DK------DVMLCIKPGEHGSTFGGNPLASAVA-MAALQVVQDEK---LAERSAKLGQELRDQLQKIQKQFPKLIKEVRG  377 (474)
T ss_pred             cH------HHHhHhccCCcCCCCCCCHHHHHHH-HHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHhCCCceEEEEe
Confidence            77      5655554332222334444444443 34676554333   33445555666666665521  21    1222


Q ss_pred             CCCCceEEEccCCC---CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          401 GSDNHLVLVDLRPM---GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       401 gt~~~~~~v~~~~~---~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                       . ..+..+.+...   .....++.+.|.++||.+.    |+     ....|||+.+..    ++++|++++++.|++++
T Consensus       378 -~-G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~----p~-----~~~~lR~~p~l~----~t~e~id~~l~~L~~~l  442 (474)
T PLN02624        378 -R-GLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAK----PT-----HDTIIRLAPPLS----ISEDELQECSKALSDVL  442 (474)
T ss_pred             -e-EEEEEEEecCCCcChHHHHHHHHHHHhCCeEEe----cC-----CCCEEEEECCcc----CCHHHHHHHHHHHHHHH
Confidence             1 22333333221   1123457777888999984    32     246799986533    66999999999999887


Q ss_pred             HHH
Q 009673          478 EIT  480 (529)
Q Consensus       478 ~~~  480 (529)
                      ...
T Consensus       443 ~~~  445 (474)
T PLN02624        443 EHD  445 (474)
T ss_pred             HHH
Confidence            543

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=99.52  E-value=1.1e-11  Score=119.25  Aligned_cols=342  Identities=17%  Similarity=0.165  Sum_probs=185.8

Q ss_pred             ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCC--CCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HH
Q 009673          104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGK--RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA  180 (529)
Q Consensus       104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~--r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A  180 (529)
                      .|.|..++.-.=|++.+.....+.+-.++|-...  -.|.|.+-.+.+-+...+.+.+.+|.+-..  -|+..|+|| .+
T Consensus        32 ~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~--~NIalTnGSQs~  109 (417)
T COG3977          32 AIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITA--QNIALTNGSQSA  109 (417)
T ss_pred             ceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCcc--ceeeecCCccch
Confidence            3555544443456666665544433223321110  014455544544445558888999988543  488899999 77


Q ss_pred             HHHHHHhhc---CCCC--EEEE-cCCCCCccccccccccccccccccceEEEE--EcccCCC---CCCCCHHHHHHHhhh
Q 009673          181 NFEVYTAIL---KPHD--RIMG-LDLPHGGHLSHGFMTPKRRVSGTSIYFESM--PYRLDES---TGLVDYDMLEKTAIL  249 (529)
Q Consensus       181 ~~~~l~all---~pGD--~Vl~-~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v--~~~v~~~---~~~iD~d~le~~i~~  249 (529)
                      .+.++.-+.   ..|+  +|+. +.|+|-|+-         .+...+-.|...  .+++.+.   .+.+|+++|.  +.+
T Consensus       110 fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~---------d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~e  178 (417)
T COG3977         110 FFYLFNLFAGRRSDGTEKKILLPLAPEYIGYA---------DAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLH--IGE  178 (417)
T ss_pred             HHHHHHHhcCccCCCcceeEeeccChhhcccc---------ccccCccceeeccCCcccccccceeeccCHHHcc--ccc
Confidence            777666553   3454  4444 355553321         111111111111  1112222   2578998874  334


Q ss_pred             cCCcEEEEcCCCCCC-----CCCHHHHHHHHHHhCCEEEEeccccc---ccccccccCCCCCcc-cEEEeccccc-ccCC
Q 009673          250 FRPKLIIAGASAYPR-----DFDYPRMRQIADAVGALLMMDMAHIS---GLVAASVVADPFKYC-DVVTTTTHKS-LRGP  319 (529)
Q Consensus       250 ~~pklIi~~~s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~---Gli~~~~~~~~~~~a-Div~~S~hK~-l~Gp  319 (529)
                       .+.+|+++-|.||+     ..++.+|-++|++||++|+.|.|+..   ++++.+..+  +=+- -+.++|+||. |+|.
T Consensus       179 -~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~--~w~~NiilC~SLSK~GLPG~  255 (417)
T COG3977         179 -STGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATP--LWNENIILCMSLSKLGLPGS  255 (417)
T ss_pred             -ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccc--cCCCCEEEEeehhhcCCCCc
Confidence             78899999888887     23577888899999999999998532   222222211  1122 2788999995 7899


Q ss_pred             CCeEEEeeCCCcchhHHHhhhccc-----ccCCCCCCChHHHHHHHHH---HHHHhcCchH-HHHHHHHHHHHHHHHHHH
Q 009673          320 RGGMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNHTIGGLAV---CLKHAQSPEF-KVYQNKVVSNCRALASRL  390 (529)
Q Consensus       320 rgG~i~~~~~~~~~~~l~~~i~~~-----~~p~~~g~p~~~~iaala~---al~~~~~~~~-~~~~~~i~~~a~~l~~~L  390 (529)
                      |.|+++.++      ++.+.+.+.     ..|+-.|.    ++++-..   .|..+.++-. .=|.+++......|..+|
T Consensus       256 R~GIiIane------~viqaitnmn~iisLap~~~G~----Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~l  325 (417)
T COG3977         256 RCGIIIANE------KVIQAITNMNGIISLAPGRMGP----AIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYL  325 (417)
T ss_pred             ceeEEEccH------HHHHHHHhccceeeecCCCccH----HHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence            999999998      677665432     12332221    2322110   1111110000 112233333333344444


Q ss_pred             HhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCC--CCCCC--CCCCCCeEEEccCCCccCCCCHHHH
Q 009673          391 VELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNS--VPGDK--SALVPGGIRIGSPAMTTRGFSEKEF  466 (529)
Q Consensus       391 ~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~--~Pg~~--~~~~~~~iRig~~~~tt~g~~~~d~  466 (529)
                      -+..+.+..+ ...-+.|+-+....++..++++.|+..||.+-++.  .||-.  =|.....+|++..      -.++.+
T Consensus       326 p~~~~~iHkp-EGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~------~~~~~i  398 (417)
T COG3977         326 PEYRCLIHKP-EGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYV------PEPEKI  398 (417)
T ss_pred             CccceeeecC-CcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecC------CCHHHH
Confidence            4334444443 22344555555666788999999999999984332  23322  1223357999853      235666


Q ss_pred             HHHHHHHHHHHH
Q 009673          467 VAIADFIHEGVE  478 (529)
Q Consensus       467 ~~la~~i~~~~~  478 (529)
                      +.=..+|.+.++
T Consensus       399 e~Gva~lae~ve  410 (417)
T COG3977         399 EKGVAILAEEVE  410 (417)
T ss_pred             HHHHHHHHHHHH
Confidence            666666655554

>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]

Probab=99.51  E-value=5.9e-12  Score=126.79  Aligned_cols=285  Identities=14%  Similarity=0.133  Sum_probs=175.7

Q ss_pred             CCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHH
Q 009673          165 ENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDML  243 (529)
Q Consensus       165 ~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~l  243 (529)
                      ..+|  +|..|+|. .+++.++..++++||.|++-..++.+.++        .++..|  +.+++++.|  ...+|+|.|
T Consensus       122 ~~~w--diiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~--------s~~a~g--v~~ipv~md--~~Gi~pE~l  187 (472)
T KOG0634|consen  122 YKNW--DIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQ--------SMEALG--VKIIPVKMD--QDGIDPESL  187 (472)
T ss_pred             CCCc--eEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHH--------hccccC--ceEEecccc--CCCCCHHHH
Confidence            4556  56678887 99999999999999999998876654432        344556  477887775  457999999


Q ss_pred             HHHhhhc--------CCcEEEEc-CCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccc--c-----------
Q 009673          244 EKTAILF--------RPKLIIAG-ASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAA--S-----------  296 (529)
Q Consensus       244 e~~i~~~--------~pklIi~~-~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~--~-----------  296 (529)
                      ++.+..-        +|+++..- .-.||+  ..   --++|.+||++|++++|.|+.++.-....  +           
T Consensus       188 ~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~  267 (472)
T KOG0634|consen  188 EEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSS  267 (472)
T ss_pred             HHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccH
Confidence            9988531        36777653 345665  22   24689999999999999999865432210  0           


Q ss_pred             ------ccCCCCC----cccEEEecccccc-cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHH
Q 009673          297 ------VVADPFK----YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK  365 (529)
Q Consensus       297 ------~~~~~~~----~aDiv~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~  365 (529)
                            ..++.+.    +--|-..||+|-+ +|.|.||+.+++      .+.+++-...--.+++ |+.....-+..-|+
T Consensus       268 ~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~------~~l~ril~~ae~~t~~-pSg~sq~iv~a~l~  340 (472)
T KOG0634|consen  268 SMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNS------LFLKRILDLAEVATSG-PSGFSQGIVYAMLK  340 (472)
T ss_pred             HHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCH------HHHHHHhhhcceeecC-cccccHHHHHHHHH
Confidence                  0111111    1124557999987 788999999998      4555543222111222 22111111122244


Q ss_pred             HhcCchH----HHHHHHHHHHHHHHHHHHHh---cC-cEEecCCCCCceEEEccC------CCCCc-H-HHHHHhHhcCC
Q 009673          366 HAQSPEF----KVYQNKVVSNCRALASRLVE---LG-YKLVSGGSDNHLVLVDLR------PMGID-G-ARVEKILDMAS  429 (529)
Q Consensus       366 ~~~~~~~----~~~~~~i~~~a~~l~~~L~~---~G-~~v~~~gt~~~~~~v~~~------~~~i~-~-~~~~~~L~~~G  429 (529)
                      ....++|    .+.+..+..++..+..+|.+   .+ +++..+ ....+.|+.+.      +..++ . +.+...+.+.|
T Consensus       341 ~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P-~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~g  419 (472)
T KOG0634|consen  341 RWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPP-KAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNG  419 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecC-CcceEEEEEecccccccccchHHHHHHHHHHHHHCC
Confidence            4333333    34445556667777777776   24 444444 34566777663      13344 2 23566678899


Q ss_pred             eEEcCCCCCCCC-----CCC-CCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          430 ITLNKNSVPGDK-----SAL-VPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       430 I~v~~~~~Pg~~-----~~~-~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      |.+    ++|..     ... .+-.+|++...     ...+++++-.+++..+++..
T Consensus       420 V~~----v~G~~F~v~p~~s~~kiffRls~a~-----a~~e~l~~g~~rf~~~ike~  467 (472)
T KOG0634|consen  420 VKL----VCGSWFMVDPESSWSKIFFRLSIAF-----AEPEKLDEGIERFGSVIKEH  467 (472)
T ss_pred             eEE----ecCceeEEcCccCCCcceEEEEeec-----CCHHHHHHHHHHHHHHHHHH
Confidence            998    44432     111 12379998754     34688888888888887754

>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.51  E-value=3.9e-13  Score=136.60  Aligned_cols=213  Identities=20%  Similarity=0.169  Sum_probs=145.6

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      |++..+.+|    ..++++-|+..     .+...||..|...++..|+++||+|+..+..|+|...  +..  +-....|
T Consensus        75 ~nPt~~~le----~~iaal~ga~~-----~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~--~l~--~~~~~~g  141 (409)
T KOG0053|consen   75 GNPTRDVLE----SGIAALEGAAH-----ALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLR--ILR--KFLPKFG  141 (409)
T ss_pred             CCCchHHHH----HHHHHHhCCce-----EEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHH--HHH--HHHHHhC
Confidence            567778887    67788889886     2556899999999999999999999999988877532  110  0011122


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  +...++      .-|++++++.+++ ++++|++.+|.||.  ..|+++|+++|+++|+++++|++-..+     ...
T Consensus       142 i--e~~~vd------~~~~~~~~~~i~~-~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p-----~~~  207 (409)
T KOG0053|consen  142 G--EGDFVD------VDDLKKILKAIKE-NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSP-----YNQ  207 (409)
T ss_pred             c--eeeeec------hhhHHHHHHhhcc-CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcc-----ccc
Confidence            2  333322      2356778888888 89999999999998  789999999999999999999973222     234


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      .|++ |||||+.|.+|++.|-.   +|.++.+..     ++.+++..... .+.+.++  .+.+ ...++.+.  .+.-+
T Consensus       208 ~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~-----~~~~~l~~~~~-~lg~~~~--p~~~-~ll~Rglk--tl~lR  276 (409)
T KOG0053|consen  208 DPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSE-----ELASRLKFLQE-DLGWCED--PFDL-FLLSRGLK--TLHLR  276 (409)
T ss_pred             ChhhcCCCEEEEeeeeeecCCcceeeeEEecCcH-----HHHHHHHHHHH-HhcCCCC--HHHH-HHHhcCcc--hhhhh
Confidence            5566 69999999999998854   488888743     67666654321 1111222  1111 11122111  12345


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 009673          376 QNKVVSNCRALASRLVE  392 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~  392 (529)
                      +++..+|+..+++.|.+
T Consensus       277 i~~~~ena~~~A~~Le~  293 (409)
T KOG0053|consen  277 INKHSENALKIALLLEA  293 (409)
T ss_pred             HHHHHHHHHHHHHHhhh
Confidence            67777888888999877

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=99.50  E-value=1.4e-11  Score=129.49  Aligned_cols=313  Identities=16%  Similarity=0.143  Sum_probs=171.5

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----  189 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all----  189 (529)
                      -.|+|.+++...+.. ...++.  .++      .+.+....+++.+..+.+.     .+..+||++|+..++....    
T Consensus        53 ~~p~v~~a~~~q~~~-~~~~~~--~~~------~~~~~~la~~l~~~~~~~~-----v~f~~SGseA~e~Aik~ar~~~~  118 (395)
T PRK03715         53 CNPGMVEALAAQAEK-LINPSP--AFY------NEPMAKLAGLLTQHSCFDK-----VFFANSGAEANEGAIKLARKWGR  118 (395)
T ss_pred             CCHHHHHHHHHHHHh-cccccc--ccc------CHHHHHHHHHHhhccCCCE-----EEEeCCcHHHHHHHHHHHHHHhh
Confidence            368888888877642 222221  111      2233333355555544332     3556899999999887663    


Q ss_pred             --CCC-CEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCC---CCCCCHHHHHHHhhhcCCcEEEEcCCC-
Q 009673          190 --KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDES---TGLVDYDMLEKTAILFRPKLIIAGASA-  261 (529)
Q Consensus       190 --~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~---~~~iD~d~le~~i~~~~pklIi~~~s~-  261 (529)
                        ++| ++|+..+..+     ||....  .++..+.. +.....+..+.   ....|++++++.+.+ ++.+|++.... 
T Consensus       119 ~~~~~r~~ii~~~~~y-----HG~t~~--~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aavi~Epv~~  190 (395)
T PRK03715        119 KHKNGAYEIITFDHSF-----HGRTLA--TMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITD-KTVAVMLEPVQG  190 (395)
T ss_pred             ccCCCCcEEEEECCCc-----CCChHH--HHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCC-CceEEEEeCCcC
Confidence              234 5677776543     222110  12222210 01001111000   013578999988875 67888876322 


Q ss_pred             CCC-CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccccC-CCCeEEEeeCCCcc
Q 009673          262 YPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVL  332 (529)
Q Consensus       262 ~p~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~G-prgG~i~~~~~~~~  332 (529)
                      ..+ ..+    +++|+++|++||+++|+|++|. |+--.|.. . .-+. ..|++++  .|.|+| ...|.+++++    
T Consensus       191 ~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G~GRtG~~~a~~~~gv~PDi~t~--gK~lg~G~p~~av~~~~----  263 (395)
T PRK03715        191 EGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-GCGRTGTLFAYELSGIEPDIMTL--GKGIGGGVPLAALLAKA----  263 (395)
T ss_pred             CCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCcchhhHhhcCCCCceeee--hhhhhCCcceEEEEEcc----
Confidence            122 334    8999999999999999999976 54222210 0 0011 3688765  499955 3457777777    


Q ss_pred             hhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----CcEEecCCCCCceEE
Q 009673          333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----GYKLVSGGSDNHLVL  408 (529)
Q Consensus       333 ~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~----G~~v~~~gt~~~~~~  408 (529)
                        ++.. ........+.++... ..++..++|+.+.++   +..+++.++.++|.+.|++.    ++.-+. | ...+.-
T Consensus       264 --~i~~-~~~~~~~~T~~g~pl-~~aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~i~~vr-G-~Glm~~  334 (395)
T PRK03715        264 --EVAV-FEAGDQGGTYNGNPL-MTAVGVAVISQLLAP---GFLEGVRARGEYLKEKLLELSEERGLEGER-G-EGLLRA  334 (395)
T ss_pred             --cccc-ccCCCcCCCCCCCHH-HHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHhhcCCcCeEE-c-ceeEEE
Confidence              4432 111111122233333 343333467666432   45667777788888888752    433222 2 234444


Q ss_pred             EccCCCCCcHHHHHHhHhcC---CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          409 VDLRPMGIDGARVEKILDMA---SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       409 v~~~~~~i~~~~~~~~L~~~---GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +.+...  ....+.+.+.+.   ||.+...         .+..|||..+..    ++++|++++++.|++++..
T Consensus       335 i~l~~~--~~~~~~~~~~~~~~~Gi~~~~~---------~~~~lR~~p~l~----~t~~ei~~~~~~l~~~l~~  393 (395)
T PRK03715        335 LLLGKD--IGPQIVEKARDMQPDGLLLNAP---------RPNLLRFMPALN----VTTEEIDQMIAMLRSVLDK  393 (395)
T ss_pred             EEecCc--hHHHHHHHHHhccCCCEEEeec---------CCCEEEEeCCcc----cCHHHHHHHHHHHHHHHHh
Confidence            455321  123444444444   9998531         235799986643    6699999999999988863

>PLN00144 acetylornithine transaminase

Probab=99.50  E-value=3.7e-11  Score=125.70  Aligned_cols=316  Identities=17%  Similarity=0.135  Sum_probs=175.3

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---  189 (529)
                      +-.|+|.+|+...+... .  +.... +. ++.  .+  ...+++.+..+.+.     .....||++|+..++....   
T Consensus        31 h~~p~v~~ai~~q~~~~-~--~~~~~-~~-~~~--~~--~la~~l~~~~~~~~-----v~f~~sGseA~e~AlklAr~~~   96 (382)
T PLN00144         31 HGDPDWVKAVAEQAGTL-A--HVSNV-YH-TIP--QV--ELAKRLVASSFADR-----VFFCNSGTEANEAAIKFARKYQ   96 (382)
T ss_pred             CCCHHHHHHHHHHHHhc-C--Ccccc-cc-CHH--HH--HHHHHHHhcCCCCe-----EEEeCCcHHHHHHHHHHHHHHH
Confidence            34788888888777532 1  11111 11 221  11  22355666654432     2456899999998876431   


Q ss_pred             C------C------CCEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCC---CCCCHHHHHHHhhhcCCc
Q 009673          190 K------P------HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAILFRPK  253 (529)
Q Consensus       190 ~------p------GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~~---~~iD~d~le~~i~~~~pk  253 (529)
                      .      +      ..+|+...-.|-     |....  .....+.. +.....+..++.   ...|++.+++.+...+++
T Consensus        97 ~~~~~~~~~~~~~~r~~ii~~~~~yH-----G~t~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~a  169 (382)
T PLN00144         97 RVRAPDKKDPAASSATEFVSFSNSFH-----GRTLG--ALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTA  169 (382)
T ss_pred             hccCCCCccccccccceEEEECCCcc-----cccHH--HHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeE
Confidence            1      1      246887775442     22100  01111110 000000000000   023789999888655788


Q ss_pred             EEEEcCCCCCC----CCC--HHHHHHHHHHhCCEEEEeccccccccccccc-CC-CCC-cccEEEecccccc-cCCCCeE
Q 009673          254 LIIAGASAYPR----DFD--YPRMRQIADAVGALLMMDMAHISGLVAASVV-AD-PFK-YCDVVTTTTHKSL-RGPRGGM  323 (529)
Q Consensus       254 lIi~~~s~~p~----~~d--~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~-~~~-~aDiv~~S~hK~l-~GprgG~  323 (529)
                      +|++....+++    ...  +++|+++|++||+++|.|++|. |+...+.. +. ... ..|++  +++|.+ +|.+.|+
T Consensus       170 avi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~PDi~--t~sK~l~~G~pig~  246 (382)
T PLN00144        170 AVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQC-GLGRTGYLWAHEAYGVEPDIM--TLAKPLAGGLPIGA  246 (382)
T ss_pred             EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchHhhhhhcCCCCCEE--EecccccCCcceEE
Confidence            88887544443    223  8899999999999999999954 54322311 11 011 35754  456998 4677899


Q ss_pred             EEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cCcEEecC-
Q 009673          324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSG-  400 (529)
Q Consensus       324 i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G~~v~~~-  400 (529)
                      +++++      ++.+.+.........+++... .++..++++.+.+.++   .+++.+..+.+.+.|.+  .....+.. 
T Consensus       247 v~~~~------~~~~~~~~~~~~~T~~~~pl~-~aaa~a~l~~i~~~~~---~~~~~~~g~~l~~~l~~~~~~~~~~~~v  316 (382)
T PLN00144        247 VLVTE------KVASAINPGDHGSTFAGGPLV-CNAALAVLDKISKPGF---LASVAKKGEYLRELLRRKLGGNPHVKEV  316 (382)
T ss_pred             EEEcH------HHHhccCCCCCCCCCCCCHHH-HHHHHHHHHHHhhchH---HHHHHHHHHHHHHHHHHHHhhCCCceee
Confidence            99987      677766543333334443333 3333445676654444   44444445555555543  11211111 


Q ss_pred             -CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          401 -GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       401 -gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                       + ...+.++.+.   .+...+...+.+.||.+.    |+.    ....||++.+..    ++++|+++.++.|.+++.
T Consensus       317 rg-~G~~~~l~l~---~~~~~~~~~~~~~Gv~i~----~~~----~~~~lrl~p~~~----~~~~~i~~~~~~l~~~l~  379 (382)
T PLN00144        317 RG-VGLLVGIQLD---VPAGPLVDACRDSGLLVL----TAG----KGDVVRLVPPLV----ISEAELEQAVEILADCLP  379 (382)
T ss_pred             ec-CceEEEEEec---CccHHHHHHHHHCCeEEe----ecC----CCCEEEEeCCCc----cCHHHHHHHHHHHHHHHH
Confidence             2 2345666552   234667788889999984    321    136899986642    458999999999998885

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=99.46  E-value=6.9e-11  Score=125.86  Aligned_cols=331  Identities=15%  Similarity=0.080  Sum_probs=174.2

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cC
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK  190 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~  190 (529)
                      .-+|.|.+|+...+.. +..+..+.+   .++...+    ..+++++++.-..+   ..+..+||++|+..++...  ..
T Consensus        59 h~~p~v~~a~~~q~~~-~~~~~~~~~---~~~~~~~----la~~L~~~~~~~~~---~v~f~~SGseA~e~AlklAr~~t  127 (433)
T PRK08117         59 HRHPKVVQAIKEQADK-LMHGPSGVI---YYESILK----LAEELAEITPGGLD---CFFFSNSGAEAIEGALKLAKHVT  127 (433)
T ss_pred             CCCHHHHHHHHHHHHh-ccCcccccc---CCHHHHH----HHHHHHHhCCCCCC---EEEEeCcHHHHHHHHHHHHHHhc
Confidence            3578899998877643 322222211   1222222    33677777732222   2344589999999988742  11


Q ss_pred             CCCEEEEcCCC-CCccccccccc-----cccccccccceEEEEEcccC---CCCC------CCCHHHHHHHhhh----cC
Q 009673          191 PHDRIMGLDLP-HGGHLSHGFMT-----PKRRVSGTSIYFESMPYRLD---ESTG------LVDYDMLEKTAIL----FR  251 (529)
Q Consensus       191 pGD~Vl~~~~~-~~g~~s~g~~~-----~~~~i~~~g~~~~~v~~~v~---~~~~------~iD~d~le~~i~~----~~  251 (529)
                      ...+|+..+-. ||.+...-...     ......-....+..++++..   +...      ..|++++++.++.    .+
T Consensus       128 gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  207 (433)
T PRK08117        128 KRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEE  207 (433)
T ss_pred             CCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCc
Confidence            23567766543 33221100000     00000000000112222210   0000      0256677776642    24


Q ss_pred             CcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccc-cCCCC
Q 009673          252 PKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSL-RGPRG  321 (529)
Q Consensus       252 pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l-~Gprg  321 (529)
                      +.+||+..  ++.+...+    +++++++|++||+++|+|++|. |+...|.. . ..+. -.|+  .+++|.+ .|.+.
T Consensus       208 ~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~gr~G~~~~~~~~gv~pDi--~t~sK~lg~G~pi  284 (433)
T PRK08117        208 VAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-GFGRTGEWFAAQTFGVVPDI--MTIAKGIASGLPL  284 (433)
T ss_pred             EEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccccchhHhhcCCCCCE--eehhhhccCCCcc
Confidence            55666652  22223444    9999999999999999999976 65333311 0 0111 2465  4677998 45777


Q ss_pred             eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC--cEEec
Q 009673          322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLVS  399 (529)
Q Consensus       322 G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G--~~v~~  399 (529)
                      |++++++      ++.+.+......+..++ +....++..++|+.+...   ...+++.++.+++.+.|.+..  +.++.
T Consensus       285 gav~~~~------~i~~~~~~~~~~~T~~~-np~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~  354 (433)
T PRK08117        285 SAVVASK------ELMEQWPLGSHGTTFGG-NPVACAAALATLEVIKEE---KLLDNANEMGAYALERLEVLKEKHPVIG  354 (433)
T ss_pred             eeEEEcH------HHHhhccCCCCCCCCCc-CHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCcee
Confidence            8888887      66666543333333333 333444444567765433   345566666777777776631  22221


Q ss_pred             --CCCCCceEEEccCCC-----CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673          400 --GGSDNHLVLVDLRPM-----GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF  472 (529)
Q Consensus       400 --~gt~~~~~~v~~~~~-----~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~  472 (529)
                        .+. .-+..+.+...     ......+.+.|.+.||.+...   |.    ....+|+..+..    ++++|++++++.
T Consensus       355 ~vrg~-Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~----~~~~lRl~p~~~----~t~~~i~~~~~~  422 (433)
T PRK08117        355 DVRGI-GLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLC---GN----AGNVLRMIPPLT----VTKEEIDEGLDI  422 (433)
T ss_pred             eeecC-CcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeec---CC----CCCEEEEeCCcc----CCHHHHHHHHHH
Confidence              111 12233344211     111244667778899988431   11    246899986543    568999999999


Q ss_pred             HHHHHHH
Q 009673          473 IHEGVEI  479 (529)
Q Consensus       473 i~~~~~~  479 (529)
                      |.+++..
T Consensus       423 l~~~l~~  429 (433)
T PRK08117        423 LDEALTE  429 (433)
T ss_pred             HHHHHHH
Confidence            9998864

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=99.46  E-value=8.8e-11  Score=124.75  Aligned_cols=329  Identities=15%  Similarity=0.046  Sum_probs=171.7

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cCC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP  191 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~p  191 (529)
                      -+|.+.+++...+.+ +...+..   ..+++  ..+ +++ +++.+..+.+...  ..+..+||++|+..++...  ...
T Consensus        58 ~~~~i~~a~~~~~~~-~~~~~~~---~~~~~--~~~-~la-~~l~~~~~~~~~~--~~~f~~sGsea~e~Alklar~~~~  127 (425)
T PRK08088         58 LHPKVVAAVEAQLKK-LSHTCFQ---VLAYE--PYL-ELC-EKMNQKVPGDFAK--KTLLVTTGSEAVENAVKIARAATK  127 (425)
T ss_pred             CCHHHHHHHHHHHhh-CCCcccc---ccCCH--HHH-HHH-HHHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHHhC
Confidence            478888888877753 2111110   01111  122 233 5666766644311  2456799999888776543  223


Q ss_pred             CCEEEEcCCCCCccccccccccccc-cc-ccc-----ceEEEEEcccCCCCCCC--CHHHHHHHhhh----cCCcEEEEc
Q 009673          192 HDRIMGLDLPHGGHLSHGFMTPKRR-VS-GTS-----IYFESMPYRLDESTGLV--DYDMLEKTAIL----FRPKLIIAG  258 (529)
Q Consensus       192 GD~Vl~~~~~~~g~~s~g~~~~~~~-i~-~~g-----~~~~~v~~~v~~~~~~i--D~d~le~~i~~----~~pklIi~~  258 (529)
                      ..+|+..++.|-|... +....... .. ..+     ..+..++++.+..+...  +++++++.+..    .+..+|++.
T Consensus       128 r~~iv~~~~~yHG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~E  206 (425)
T PRK08088        128 RSGVIAFTGAYHGRTH-YTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIE  206 (425)
T ss_pred             CCeEEEECCccCCccH-HHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEEC
Confidence            3456666766533311 10000000 00 000     00112223332111111  14568887751    245677765


Q ss_pred             CC-CCCC-CC----CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccc-cCCCCeEEEeeCC
Q 009673          259 AS-AYPR-DF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL-RGPRGGMIFFKKD  329 (529)
Q Consensus       259 ~s-~~p~-~~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l-~GprgG~i~~~~~  329 (529)
                      .. ++++ ..    .+++|.++|+++|+++|+|++|. |+...+.. ..++  +.+.-+.|++|.+ +|.|.|++++++ 
T Consensus       207 pi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~-g~g~~g~~-~~~~~~~~~pdi~s~sK~l~~G~rig~v~~~~-  283 (425)
T PRK08088        207 PVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQT-GAGRTGTL-FAMEQMGVAADLTTFAKSIAGGFPLAGVTGRA-  283 (425)
T ss_pred             cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcch-hHHhhcCCCCCEEEEeccccCCCcceeeEecH-
Confidence            32 3333 22    38899999999999999999965 54322211 1111  1222246778998 567889999987 


Q ss_pred             CcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cCc-EEecCCCCC
Q 009673          330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGY-KLVSGGSDN  404 (529)
Q Consensus       330 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~-~v~~~gt~~  404 (529)
                           ++.+.+.........+++.. ..++....++......   ..+++.+..+++.+.|.+    .+. ..+.+ . .
T Consensus       284 -----~~~~~~~~~~~~~t~~~~~~-~~~a~~~~l~~~~~~~---~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g-~-G  352 (425)
T PRK08088        284 -----EVMDAIAPGGLGGTYAGNPI-ACAAALAVLKVFEQEN---LLQKANALGEKLKDGLLAIAEKHPEIGDVRG-L-G  352 (425)
T ss_pred             -----HHHhhcCCCCCCCCCCcCHH-HHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCCeEEEec-c-c
Confidence                 67777655443333444333 3333344566543333   333444444444444433    222 11222 1 3


Q ss_pred             ceEEEccCC-------CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          405 HLVLVDLRP-------MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       405 ~~~~v~~~~-------~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      .+.|+.+..       .......+.+.+.+.||.+.    |+..   .+..||++.+..    .+++|+++.++.|.+++
T Consensus       353 ~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~----~~~~---~~~~iRl~~~~~----~t~~ei~~~i~~l~~~l  421 (425)
T PRK08088        353 AMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILL----SCGP---YYNVLRILVPLT----IEDAQIRQGLEIIAQCF  421 (425)
T ss_pred             eEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEe----cCCC---CCCEEEEECCCC----cCHHHHHHHHHHHHHHH
Confidence            456666521       11124557777778898873    3221   146799987643    45899999999999888


Q ss_pred             H
Q 009673          478 E  478 (529)
Q Consensus       478 ~  478 (529)
                      .
T Consensus       422 ~  422 (425)
T PRK08088        422 D  422 (425)
T ss_pred             H
Confidence            6

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=99.44  E-value=1.2e-10  Score=122.75  Aligned_cols=323  Identities=15%  Similarity=0.126  Sum_probs=174.0

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---  189 (529)
                      .-.|.|.+|+...+.+-.   +.+..++  ++.  .+  ...+++.+++... +   -....+||++|+..++....   
T Consensus        56 h~~p~v~~ai~~q~~~~~---~~~~~~~--~~~--~~--~la~~L~~~~~~~-~---~v~f~~sGseA~e~AlklAr~~~  122 (408)
T PRK04612         56 HNDPDLVAALTEQAGKLW---HTSNVFY--SAP--PL--KLAEELVTASRFA-E---KVFLCNSGTEANEAAIKLVRKWA  122 (408)
T ss_pred             CCCHHHHHHHHHHHHhcc---ccccccC--CHH--HH--HHHHHHHhhCCCC-C---EEEEcCchHHHHHHHHHHHHHHH
Confidence            347888888887765321   1111111  111  11  1235566655322 2   13456899999998876432   


Q ss_pred             ---C--CC-CEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCC---CCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          190 ---K--PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDES---TGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       190 ---~--pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~---~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                         +  ++ .+|+...-.|     ||....  .+...+.. +..-..++.+.   -...|.+.+++.+...++.+|++..
T Consensus       123 ~~~g~~~~r~~ii~~~~~y-----HG~t~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP  195 (408)
T PRK04612        123 SSQGRPADKRVIVTFRGSF-----HGRTLA--AVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLEP  195 (408)
T ss_pred             HhhCCCCCCcEEEEECCCc-----CCccHH--HHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEECC
Confidence               1  22 3688776543     222110  11111100 00000000000   0123788999888653456666653


Q ss_pred             CC-CCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC-CcccEEEecccccc-cCCCCeEEEeeCCCc
Q 009673          260 SA-YPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-KYCDVVTTTTHKSL-RGPRGGMIFFKKDPV  331 (529)
Q Consensus       260 s~-~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-~~aDiv~~S~hK~l-~GprgG~i~~~~~~~  331 (529)
                      .. .++  ..   -+++|+++|++||+++|+|++|. |+-..+...... .+...-+.+++|.+ +|++.|++++++   
T Consensus       196 ~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~gr~G~~~a~~~~~~~pdi~t~~K~l~~G~piga~~~~~---  271 (408)
T PRK04612        196 IQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQC-GMGRTGTLFAHWQEQVTPDIVTLAKALGGGFPIGAMLAGP---  271 (408)
T ss_pred             ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCchhhhhhcCCCCCEEEEcchhcCCCceEEEEECH---
Confidence            22 111  22   38899999999999999999975 543222110000 02223334567998 466778888887   


Q ss_pred             chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEec--CCCCCceE
Q 009673          332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS--GGSDNHLV  407 (529)
Q Consensus       332 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~--~gt~~~~~  407 (529)
                         ++.+.+.........+++.. ..++...+|+.+.++   +..+++.++.+++.+.|++.  .+.++.  .|. ..+.
T Consensus       272 ---~~~~~~~~~~~~~t~~~~p~-~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~-Gl~~  343 (408)
T PRK04612        272 ---KVAETMQFGAHGTTFGGNPL-AAAVARVALRKLASP---QIAANVARQSAALRAGLEALNAEFGVFAQVRGR-GLML  343 (408)
T ss_pred             ---HHHhhhcCCCcCCCCCCCHH-HHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecc-ceEE
Confidence               66666554333333444333 344444467665443   45667777777888877663  222222  121 2233


Q ss_pred             EEccCCC-CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       408 ~v~~~~~-~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      -+.+.+. .-....+.+.|.+.||.+..         .++..||+..+.    .++++|++++.+.|.+++...
T Consensus       344 ~i~~~~~~~~~a~~i~~~l~~~Gvlv~~---------~g~~~lRl~Ppl----~it~eeid~~l~~l~~~l~~~  404 (408)
T PRK04612        344 GAVLAPAHAGQAGAILDLAAEHGLLLLQ---------AGPDVLRFVPAL----NLTDAELADGLARLRLALADY  404 (408)
T ss_pred             EEEecCchhhHHHHHHHHHHHCCeEEee---------CCCCEEEEcCCc----cCCHHHHHHHHHHHHHHHHHH
Confidence            3333221 11235677788899999832         124689997553    367999999999999988643

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=99.41  E-value=5.7e-11  Score=129.34  Aligned_cols=234  Identities=18%  Similarity=0.148  Sum_probs=150.5

Q ss_pred             chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC----C-----C------------------C--
Q 009673          143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK----P-----H------------------D--  193 (529)
Q Consensus       143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~----p-----G------------------D--  193 (529)
                      .+....+|+.+.+++++++|.+. .|+.  .+++||.||+.++.+..+    |     +                  |  
T Consensus       118 SP~~t~lE~~vi~~la~l~G~~~-~~G~--~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~  194 (608)
T TIGR03811       118 SPATSQMEEEVGKEFATLMGYKN-GWGH--IVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEI  194 (608)
T ss_pred             CchHHHHHHHHHHHHHHHhCCCC-CCeE--EeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccc
Confidence            34567899999999999999986 4654  346777999987665311    1     0                  0  


Q ss_pred             -----------------------------EEEEcCCCCCccccccccccccccccccceE-EEEEcccCCCCCCCCHHHH
Q 009673          194 -----------------------------RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDML  243 (529)
Q Consensus       194 -----------------------------~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~-~~v~~~v~~~~~~iD~d~l  243 (529)
                                                   +++++.   .+|+|..     |.+...|.+. .++.+++| +++.+|+++|
T Consensus       195 ~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~---~aHyS~~-----KAa~ilGlG~~~vv~VpvD-~~~rmd~~~L  265 (608)
T TIGR03811       195 MDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQ---TKHYSWL-----KAADIIGIGLDQVIPVPVD-SNYRMDINEL  265 (608)
T ss_pred             cccccccccchhhhhhhccccccccccceEEEECC---CccHHHH-----HHHHHcCCCcccEEEeecC-CCCcCCHHHH
Confidence                                         233332   2233322     3445566542 35567777 5689999999


Q ss_pred             HHHhhhc----CC-cEEEEc--CCCCCCCCCHHHHHHHH---HHhCC--EEEEecccccccc---cccc-----------
Q 009673          244 EKTAILF----RP-KLIIAG--ASAYPRDFDYPRMRQIA---DAVGA--LLMMDMAHISGLV---AASV-----------  297 (529)
Q Consensus       244 e~~i~~~----~p-klIi~~--~s~~p~~~d~~~i~~ia---~~~g~--~livD~ah~~Gli---~~~~-----------  297 (529)
                      ++.|.+.    .| -+|+.+  .+..+.+.|+++|.++|   +++|+  |+++|+|++ |..   ..+.           
T Consensus       266 ~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyG-G~~~~l~~~~~~~~~p~~~~~  344 (608)
T TIGR03811       266 EKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYG-GYGRAIFLDEDDNFIPYDDLQ  344 (608)
T ss_pred             HHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeecccc-chhhhhhccccccccccchhh
Confidence            9988642    12 234433  44555588999999999   66888  699999854 421   1010           


Q ss_pred             --------c------C--------CCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcc---cc------c
Q 009673          298 --------V------A--------DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN---AV------F  345 (529)
Q Consensus       298 --------~------~--------~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~---~~------~  345 (529)
                              .      .        ..++++|-++..+||++.-|-+ |++++++.     .+.+.+..   ..      .
T Consensus       345 ~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~-----~~~~~~~~~a~Yl~~~~~~~  419 (608)
T TIGR03811       345 EVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDI-----RMRDVISYFATYVFEKGADI  419 (608)
T ss_pred             cccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCH-----HHHHHHhcCcchhccccccC
Confidence                    0      0        0134799999999999877877 88888875     33332211   00      1


Q ss_pred             C------CCCCCChHHHHHHHHHHHHHh--cCchHHHHHHHHHHHHHHHHHHHHhcC
Q 009673          346 P------GLQGGPHNHTIGGLAVCLKHA--QSPEFKVYQNKVVSNCRALASRLVELG  394 (529)
Q Consensus       346 p------~~~g~p~~~~iaala~al~~~--~~~~~~~~~~~i~~~a~~l~~~L~~~G  394 (529)
                      |      +..|+..-...++++.+++.+  ...+|.++.++..++++++.+.|++.+
T Consensus       420 p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~  476 (608)
T TIGR03811       420 PALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLE  476 (608)
T ss_pred             cccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            1      123332223455666777766  556889999999999999999998743

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.41  E-value=1.1e-10  Score=123.79  Aligned_cols=325  Identities=18%  Similarity=0.131  Sum_probs=173.1

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----  189 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all----  189 (529)
                      -.|+|.+|+...+.. ....... . +. ++   ... ...+++.+++.-..+.   ....+||++|+..++....    
T Consensus        59 ~~p~v~~ai~~q~~~-~~~~~~~-~-~~-~~---~~~-~la~~l~~~~p~~~~~---v~f~~sGseA~e~A~klar~~~~  127 (423)
T PRK05964         59 NHPYIDQAIREQLDR-LDHVIFA-G-FT-HE---PAE-RLAQRLVALTPGGLDH---VFFSDSGSVAVEVALKMALQYWR  127 (423)
T ss_pred             CCHHHHHHHHHHHhh-CCCcccc-c-cC-CH---HHH-HHHHHHHHhCCCCCCE---EEEeCCcHHHHHHHHHHHHHHHH
Confidence            468888888877643 2111000 0 11 11   112 2336677776422221   2446899999998876431    


Q ss_pred             ---CCC-CEEEEcCCCCCccccccccccc-ccc---ccccc--eEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEE
Q 009673          190 ---KPH-DRIMGLDLPHGGHLSHGFMTPK-RRV---SGTSI--YFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIA  257 (529)
Q Consensus       190 ---~pG-D~Vl~~~~~~~g~~s~g~~~~~-~~i---~~~g~--~~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~  257 (529)
                         ++| .+|+...-.|-|... +..... ...   .+.+.  ....++++.+ +....+++++++.+.+.  +..+|++
T Consensus       128 ~~~~~~r~~ii~~~~~yHG~t~-~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~l~~~l~~~~~~iaavi~  205 (423)
T PRK05964        128 NRGEPGRSRFLSLRGGYHGDTI-GTMSVGDRGGMHALYTPLLFEQVTAPFPPD-GYEQATLDALEALLEKHAGEIAAFIV  205 (423)
T ss_pred             hcCCCCCcEEEEEcCCcCCccH-HHHhcCCCccccccccCcCCCCEEeCCCcc-hhHHHHHHHHHHHHHhCCCcEEEEEE
Confidence               133 578877755433210 100000 000   00000  0122233211 10112378888888642  3446666


Q ss_pred             cC--CCCCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccccCC--CCeEEE
Q 009673          258 GA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP--RGGMIF  325 (529)
Q Consensus       258 ~~--s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~Gp--rgG~i~  325 (529)
                      ..  ...++     ...+++|+++|++||+++|+|++| .|+...|.. . .... ..|+++.  .|+|.|.  +.|+++
T Consensus       206 Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tg~gr~G~~~a~~~~~v~pDi~~~--~K~l~gG~~p~~av~  282 (423)
T PRK05964        206 EPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIA-TGFGRTGTLFACEQAGVSPDIMCL--SKGLTGGYLPLAATL  282 (423)
T ss_pred             ecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCcCcchhHHHhcCCCCCeeee--ehhhhcCcccceEEE
Confidence            53  22222     224889999999999999999997 454322211 0 0011 3577655  5999553  568888


Q ss_pred             eeCCCcchhHHHhhhccc------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEe
Q 009673          326 FKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLV  398 (529)
Q Consensus       326 ~~~~~~~~~~l~~~i~~~------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~  398 (529)
                      +++      ++.+.+...      ...+..++ +...+++..++++.+..+   .+.+++.++.+++.+.|++. +++.+
T Consensus       283 ~~~------~i~~~~~~~~~~~~~~~~~T~~~-np~~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~~i  352 (423)
T PRK05964        283 CTA------EIFEAFYSDDRAKAFMHSPSYTA-NPLACAAANASLDLFEDE---PVLERVAALSAGLAEGLEPFRDLPGV  352 (423)
T ss_pred             EcH------HHHHhhhcCCcccccccCCCCCc-CHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhccCCCe
Confidence            877      676665321      11111222 333454444567765443   34566777777788877763 33322


Q ss_pred             cC-CCCCceEEEccCCCCC--cHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          399 SG-GSDNHLVLVDLRPMGI--DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       399 ~~-gt~~~~~~v~~~~~~i--~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      .. .....+..+.+.....  ....+.+.|.++||.+...          ...+||+.+..    ++++|++++++.+++
T Consensus       353 ~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~----------~~~lR~~p~l~----~t~edId~~v~~l~~  418 (423)
T PRK05964        353 ADVRVLGAIGAVELDRPVLERDGPALRAFALERGVLLRPL----------GNTIYLMPPYI----ITAEELDRITDAIVE  418 (423)
T ss_pred             EEeecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEEec----------CCEEEEeCCcc----cCHHHHHHHHHHHHH
Confidence            21 0122333444432110  1356778888899998431          24799986644    468999999999998


Q ss_pred             HHH
Q 009673          476 GVE  478 (529)
Q Consensus       476 ~~~  478 (529)
                      ++.
T Consensus       419 al~  421 (423)
T PRK05964        419 VAD  421 (423)
T ss_pred             HHh
Confidence            875

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.40  E-value=1.3e-10  Score=123.32  Aligned_cols=327  Identities=16%  Similarity=0.115  Sum_probs=176.6

Q ss_pred             cceeEecCC--C---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673          103 KSLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG  177 (529)
Q Consensus       103 ~~i~L~ase--n---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG  177 (529)
                      ..|++..+.  .   ..+|+|.+++...+.+..  .     ++...+.    +....+++.+++.- .+.  + ....||
T Consensus        51 ~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~--~-----~~~~~~~----~~~la~~L~~~~~~-~~~--v-~~~~sG  115 (426)
T PRK00062         51 EYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGL--S-----FGAPTEL----EVELAELVIELVPS-IEM--V-RMVNSG  115 (426)
T ss_pred             EEEEcccchhhhhcCCCCHHHHHHHHHHHHhCC--c-----CCCCCHH----HHHHHHHHHHhCCC-CCE--E-EEecCH
Confidence            346665442  1   467899999988775421  1     1111221    11233666666531 222  2 446889


Q ss_pred             HHHHHHHHHhhcC--CCCEEEEcCCCCCcccccccccc--cccc----ccccceEEEE---EcccCCCCCCCCHHHHHHH
Q 009673          178 SPANFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTP--KRRV----SGTSIYFESM---PYRLDESTGLVDYDMLEKT  246 (529)
Q Consensus       178 s~A~~~~l~all~--pGD~Vl~~~~~~~g~~s~g~~~~--~~~i----~~~g~~~~~v---~~~v~~~~~~iD~d~le~~  246 (529)
                      ++|+..++.....  .+++|+..+..|-|+. .+....  ....    ...+.....+   .+.+    ...|++++++.
T Consensus       116 seA~e~Aik~a~~~~g~~~ii~~~~~yHG~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~d~~~l~~~  190 (426)
T PRK00062        116 TEATMSAIRLARGYTGRDKIIKFEGCYHGHA-DSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTA----PYNDLEAVEEL  190 (426)
T ss_pred             HHHHHHHHHHHHHHhCCCeEEEEcCccCCch-hhhhhccCccccccCCCCCCCCCcccccceEEc----CCCCHHHHHHH
Confidence            9999998886532  3678998887664431 000000  0000    0000000000   0111    12478999888


Q ss_pred             hhh--cCCcEEEEc-C-CCCCCCCC----HHHHHHHHHHhCCEEEEeccccccccccccc-CCCCC-cccEEEecccccc
Q 009673          247 AIL--FRPKLIIAG-A-SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK-YCDVVTTTTHKSL  316 (529)
Q Consensus       247 i~~--~~pklIi~~-~-s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~~~~-~aDiv~~S~hK~l  316 (529)
                      +..  .++.+|++. . ++.+...+    +++|+++|++||+++|+|++|. |+...+.. ...+. ..|+  .+++|.+
T Consensus       191 i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-G~r~g~~~~~~~~~~~pDi--~~~gK~l  267 (426)
T PRK00062        191 FEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT-GFRVALGGAQGYYGVTPDL--TTLGKII  267 (426)
T ss_pred             HHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh-ccccCCccHHHHhCCCcch--HhhhhHh
Confidence            864  245677776 2 23333445    8999999999999999999975 65322111 11111 2465  4567998


Q ss_pred             -cCCCCeEEEeeCCCcchhHHHhhhccc--ccC-CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673          317 -RGPRGGMIFFKKDPVLGVELESAINNA--VFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE  392 (529)
Q Consensus       317 -~GprgG~i~~~~~~~~~~~l~~~i~~~--~~p-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~  392 (529)
                       .|++.|++++++      ++.+.++..  .+. ...+++.. ..++..++|+.+...   +..+++.++.+++.+.|++
T Consensus       268 ~~G~p~ga~~~~~------~i~~~~~~~~~~~~~~T~~~~p~-~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~  337 (426)
T PRK00062        268 GGGLPVGAFGGRR------EIMEQLAPLGPVYQAGTLSGNPL-AMAAGLATLKLLKEP---GFYEELEALTKRLAEGLKE  337 (426)
T ss_pred             hCCCcceeeeEHH------HHHHhhccCCCceecccCcCCHH-HHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHH
Confidence             466788888887      677766421  111 12234333 344444467766443   3456666666777776654


Q ss_pred             ----cCcEEecCCCCCceEEEccCCCCC---------c---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCC
Q 009673          393 ----LGYKLVSGGSDNHLVLVDLRPMGI---------D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAM  456 (529)
Q Consensus       393 ----~G~~v~~~gt~~~~~~v~~~~~~i---------~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~  456 (529)
                          .++.....+ ...+.-+.+.....         +   ...+.+.|.++||.+...         ....+|+.   +
T Consensus       338 ~~~~~~~~~~vrg-~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~---------~~~~~~~~---~  404 (426)
T PRK00062        338 AAKKAGIPLTVNR-VGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPS---------QFEAGFVS---A  404 (426)
T ss_pred             HHHHcCCceEEEE-ecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecC---------CcCceeee---c
Confidence                354331111 12222222221100         1   135777788899998532         11235553   2


Q ss_pred             ccCCCCHHHHHHHHHHHHHHHH
Q 009673          457 TTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       457 tt~g~~~~d~~~la~~i~~~~~  478 (529)
                         -++++|++++.+.+.+++.
T Consensus       405 ---~~t~~ei~~~~~~l~~~l~  423 (426)
T PRK00062        405 ---AHTDEDIEKTLEAARKAFA  423 (426)
T ss_pred             ---cCCHHHHHHHHHHHHHHHH
Confidence               2679999999999998875

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=99.39  E-value=6.7e-10  Score=117.73  Aligned_cols=328  Identities=14%  Similarity=0.114  Sum_probs=173.3

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHHHHhh-cC
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAI-LK  190 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs~A~~~~l~al-l~  190 (529)
                      .-.|.|.+|+...+.. +..  .....+ .++  ..+ ++ .+++.+++... .+   ..+..+||++|+..++... .-
T Consensus        56 h~~p~v~~ai~~ql~~-~~~--~~~~~~-~~~--~~~-~l-a~~l~~~~p~~~~~---~~~f~~sGseA~e~AlklAr~~  124 (421)
T PRK09792         56 HRHPDLVAAVEQQLQQ-FTH--TAYQIV-PYE--SYV-TL-AEKINALAPVSGQA---KTAFFTTGAEAVENAVKIARAH  124 (421)
T ss_pred             CCCHHHHHHHHHHHHh-ccC--cccCcc-CCH--HHH-HH-HHHHHHhCCCCCCc---eEEEeCChHHHHHHHHHHHHHh
Confidence            3478888888877653 221  110001 111  112 22 35566665422 11   1345689999999887643 22


Q ss_pred             CC-CEEEEcCCCCCccccccccc-------cccccccccceEEEEEcccCCCCCC---CCHHHHHHHhhh----cCCcEE
Q 009673          191 PH-DRIMGLDLPHGGHLSHGFMT-------PKRRVSGTSIYFESMPYRLDESTGL---VDYDMLEKTAIL----FRPKLI  255 (529)
Q Consensus       191 pG-D~Vl~~~~~~~g~~s~g~~~-------~~~~i~~~g~~~~~v~~~v~~~~~~---iD~d~le~~i~~----~~pklI  255 (529)
                      .| .+|+...-.|-|.-. +...       ...........+..++++.+. .+.   -|++.+++.+..    .++.+|
T Consensus       125 tgr~~ii~~~~~yHG~t~-~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~~~~~~~~~iaav  202 (421)
T PRK09792        125 TGRPGVIAFSGGFHGRTY-MTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLFKSDIEAKQVAAI  202 (421)
T ss_pred             cCCCeEEEECCCcCCccH-HHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHHHhccCCCceEEE
Confidence            33 478877754433210 0000       000000000011233443321 111   134778887762    256788


Q ss_pred             EEcCCCCCC---CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC---CC-cccEEEecccccc-cCCCCeEE
Q 009673          256 IAGASAYPR---DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK-YCDVVTTTTHKSL-RGPRGGMI  324 (529)
Q Consensus       256 i~~~s~~p~---~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~~-~aDiv~~S~hK~l-~GprgG~i  324 (529)
                      ++....+++   ..+   +++|+++|++||+++|+|+++. |+...+.. ..   +. ..|++  +++|+| +|.+.|++
T Consensus       203 i~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~G~~-~a~~~~~~~pDi~--t~gK~l~~G~pigav  278 (421)
T PRK09792        203 IFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQS-GFARTGKL-FAMDHYADKPDLM--TMAKSLAGGMPLSGV  278 (421)
T ss_pred             EEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCCch-hHHHhcCCCCcEE--EeehhhcCCCceEEE
Confidence            887443332   334   8899999999999999999854 44222211 11   11 35765  456998 46778999


Q ss_pred             EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEecCCC
Q 009673          325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSGGS  402 (529)
Q Consensus       325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~~gt  402 (529)
                      ++++      ++.+.+.......+.+++.....++++ .++.+.+.   +..+++.+..+++.+.|++.  .++.+..-+
T Consensus       279 ~~~~------~i~~~~~~~~~~~T~~gnpl~~aaa~a-~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vr  348 (421)
T PRK09792        279 VGNA------NIMDAPAPGGLGGTYAGNPLAVAAAHA-VLNIIDKE---SLCERANQLGQRLKNTLIDAKESVPAIAAVR  348 (421)
T ss_pred             EEcH------HHHhccCCCCcCCCCCCCHHHHHHHHH-HHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhCCCcceec
Confidence            9987      677666543333334444444444443 55655433   33445545555555555441  122121111


Q ss_pred             -CCceEEEccCCCC------CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          403 -DNHLVLVDLRPMG------IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       403 -~~~~~~v~~~~~~------i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                       ...+.++.+....      .....+...+.++||.+...   |   . ....||+..+. +   ++++|+++.+++|.+
T Consensus       349 G~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~---g---~-~~~~irl~P~l-~---i~~~ei~~~~~~l~~  417 (421)
T PRK09792        349 GLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTC---G---A-YGNVIRFLYPL-T---IPDAQFDAAMKILQD  417 (421)
T ss_pred             ccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeec---C---C-CCCEEEEeCCC-c---CCHHHHHHHHHHHHH
Confidence             1244566664221      12345667777899998311   1   1 24689997554 2   568999999999988


Q ss_pred             HHH
Q 009673          476 GVE  478 (529)
Q Consensus       476 ~~~  478 (529)
                      ++.
T Consensus       418 ~l~  420 (421)
T PRK09792        418 ALS  420 (421)
T ss_pred             HHh
Confidence            874

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=99.38  E-value=4.6e-10  Score=119.87  Aligned_cols=323  Identities=14%  Similarity=0.091  Sum_probs=172.6

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---  189 (529)
                      .-.|+|.+|+...+.. ...  . .+++. ++.    .....+++.+++.-..+   ......|||+|+..++....   
T Consensus        98 H~~p~v~~Ai~~ql~~-l~~--~-~~~~~-~~~----~~~lae~L~~~~p~~~~---~v~f~~SGsEAve~AlklAr~~t  165 (459)
T PRK11522         98 HRNPVVVSAVQNQLAK-QPL--H-SQELL-DPL----RAMLAKTLAALTPGKLK---YSFFCNSGTESVEAALKLAKAYQ  165 (459)
T ss_pred             CCCHHHHHHHHHHHhh-Ccc--c-ccccC-CHH----HHHHHHHHHHhCCCCCC---EEEEeCCchHHHHHHHHHHHHHh
Confidence            3479999999887753 211  1 11111 221    22223666666543222   12446899999998886431   


Q ss_pred             -CCC-CEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCC---CCCCHHHHHHHhhh-----cCCcEEEEc
Q 009673          190 -KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAIL-----FRPKLIIAG  258 (529)
Q Consensus       190 -~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~~---~~iD~d~le~~i~~-----~~pklIi~~  258 (529)
                       +.| .+|+...-.|     ||....  .+...+.. +..-..+..+..   ...|.+++++.+..     .+..+||+.
T Consensus       166 ~~~gr~~ii~~~~~y-----HG~t~~--~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvE  238 (459)
T PRK11522        166 SPRGKFTFIATSGAF-----HGKSLG--ALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILE  238 (459)
T ss_pred             ccCCCcEEEEecCCC-----CCCcHH--HhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEe
Confidence             123 3577665443     222100  11111110 000000110000   12377888887753     133456665


Q ss_pred             C--CCCCCCCC----HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccccCC--CCeEEEee
Q 009673          259 A--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP--RGGMIFFK  327 (529)
Q Consensus       259 ~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~Gp--rgG~i~~~  327 (529)
                      .  ++.+...+    +++++++|++||+++|+|++|. |+--.|.. . .-+. ..|+++  +.|.|+|.  ..|.++++
T Consensus       239 pv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDivt--~gK~lggG~~Pigav~~~  315 (459)
T PRK11522        239 PIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQT-GMGRTGKMFACEHENVQPDILC--LAKALGGGVMPIGATIAT  315 (459)
T ss_pred             cccCCCCCccCCHHHHHHHHHHHHHcCCEEEecccee-cCCccchhhhhhccCCCCCEEE--echhhhCCCccceeEEEc
Confidence            2  22223344    8999999999999999999984 53211210 0 0011 358875  46999652  45555565


Q ss_pred             CCCcchhHHHhhhccc--ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcE-EecC--
Q 009673          328 KDPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYK-LVSG--  400 (529)
Q Consensus       328 ~~~~~~~~l~~~i~~~--~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~-v~~~--  400 (529)
                      +      ++.+.+...  .+..+.+++.. ..++..++|+.+.++   +..+++.++.++|.+.|++.  .+. ++..  
T Consensus       316 ~------~i~~~~~~~~~~~~~T~~gnp~-~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~Vr  385 (459)
T PRK11522        316 E------EVFSVLFDNPFLHTTTFGGNPL-ACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLAREYPDLVQEAR  385 (459)
T ss_pred             H------HHHHHhccCCcccCCCCCCCHH-HHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhCCCceeeEE
Confidence            5      455544221  22223344333 333333467776553   34677777788888888763  232 2211  


Q ss_pred             CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          401 GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       401 gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      | ...+.-+.+.... ....+.+.|.++||.+... .      .....+|+..+..    ++++|++++++.+.+++...
T Consensus       386 G-~Gl~~giel~~~~-~~~~i~~~l~~~Gvl~~~~-~------~~~~~lr~~Ppl~----~t~~~id~~l~~l~~~l~~~  452 (459)
T PRK11522        386 G-KGMLMAIEFVDNE-IGYNFASEMFRQRVLVAGT-L------NNAKTIRIEPPLT----LTIEQCEQVLKAARKALAAM  452 (459)
T ss_pred             e-ceeEEEEEecCch-HHHHHHHHHHHCCeEEEec-C------CCCCEEEEECCcc----CCHHHHHHHHHHHHHHHHHH
Confidence            1 1233444443321 2345777787899998532 1      1246799976533    67999999999999988754

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=99.37  E-value=4.8e-10  Score=116.19  Aligned_cols=304  Identities=15%  Similarity=0.128  Sum_probs=166.7

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCC
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP  191 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~p  191 (529)
                      .-.|+|.+|+...+.+-..   .+..| . ++...++    .++++++++.+.     .+..+|||+|+..++... ..+
T Consensus        40 h~~p~v~~ai~~ql~~~~~---~~~~~-~-~~~~~~l----a~~l~~~~~~~~-----v~~~~SGseA~e~Alklar~~~  105 (364)
T PRK04013         40 HNHPEWVEEMSEQLEKLVV---AGPMF-E-HEEKEEM----LEELSKWVNYEY-----VYMGNSGTEAVEAALKFARLYT  105 (364)
T ss_pred             CCCHHHHHHHHHHHHhcCC---ccCCc-C-CHHHHHH----HHHHHhhcCCCE-----EEEeCchHHHHHHHHHHHHHHh
Confidence            3468888988877754221   11111 1 2222222    366777776653     255699999999988755 345


Q ss_pred             C-CEEEEcCCCCCccccccccccccccccccc-----eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCC
Q 009673          192 H-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YPR  264 (529)
Q Consensus       192 G-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~-----~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~-~p~  264 (529)
                      | ++|+..+..|-|... +      .+...+.     .+.+...++.... ..|.+.+++.+.+ ++.+|++.... .++
T Consensus       106 gr~~Ii~~~~syHG~t~-~------~ls~~~~~~~~~~~~p~~~~~~~~~-~~d~~~l~~~i~~-~~aAvivEpi~g~gG  176 (364)
T PRK04013        106 GRKEIIAMTNAFHGRTM-G------ALSATWKPKYREDFEPLVPGFKHIP-FNDVEAAKEAITK-ETAAVIFEPIQGEGG  176 (364)
T ss_pred             CCCEEEEECCccccCch-h------hccCCCCcccccCCCCCCCCcEEec-CCCHHHHHHHhcC-CcEEEEEcCCcCCCC
Confidence            6 899988765433211 1      0111110     0111110111001 2378889988876 78888886322 222


Q ss_pred             --CCC---HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccccC-CCCeEEEeeCCCcchhH
Q 009673          265 --DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVLGVE  335 (529)
Q Consensus       265 --~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~G-prgG~i~~~~~~~~~~~  335 (529)
                        ..|   +++++++|++||+++|.|+++. |+ -.|.. . .-+. ..|+++++  |.++| ...|.++.++      +
T Consensus       177 ~~~~~~~yl~~lr~lc~~~gillI~DEv~t-G~-RtG~~~a~~~~gv~PDiv~~g--K~lggG~P~~a~~~~~------~  246 (364)
T PRK04013        177 IVPAKEEFVKTLRDLTEDVGALLIADEVQS-GL-RTGKFLAIEHYKVEPDIVTMG--KGIGNGVPVSLTLTNF------D  246 (364)
T ss_pred             CcCCCHHHHHHHHHHHHHcCCEEEEechhh-cC-CCCchhHHHhcCCCCCEEEec--ccccCCceeEEEEecc------c
Confidence              344   8999999999999999999975 54 33311 1 1112 46888875  99854 3446666665      3


Q ss_pred             HHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCC
Q 009673          336 LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMG  415 (529)
Q Consensus       336 l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~  415 (529)
                      +.    ......+.++......+++ +.|+.+.++++.+..++       ..+.|...-+.-+. |. .-+.-+.+..  
T Consensus       247 ~~----~~~~~~T~~gnp~~~aaa~-a~l~~i~~~~l~~~~~~-------~l~~l~~~~v~~vR-G~-Gl~~gve~~~--  310 (364)
T PRK04013        247 VE----RGKHGSTFGGNPLACKAVA-VTLRILRRERLVEKAGE-------KFIEIKGERVVTTR-GR-GLMIGIVLKK--  310 (364)
T ss_pred             cc----CCCcCCCCCcCHHHHHHHH-HHHHHHHhccHHHHHHH-------HHHHhccCcceeee-eC-cEEEEEEeCC--
Confidence            31    1112233444333333333 35776655443222222       11233221111111 11 1223334432  


Q ss_pred             CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          416 IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       416 i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                       ....+.+.+.++|+.+...         +...||+. |.++   ++++|++++.++|.+++..
T Consensus       311 -~~~~i~~~~~~~Gll~~~~---------g~~vlr~~-Ppl~---it~~~i~~~~~~l~~~l~~  360 (364)
T PRK04013        311 -PVGKYVEELQNRGYLVHTA---------GQRVIRLL-PPLI---ISKDTMEEAKSAIEGVIND  360 (364)
T ss_pred             -cHHHHHHHHHhCCcEEeeC---------CCCEEEEe-CCcc---cCHHHHHHHHHHHHHHHHH
Confidence             1345777778899998431         23579996 4455   6799999999999999864

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=99.37  E-value=1.6e-09  Score=111.34  Aligned_cols=320  Identities=18%  Similarity=0.094  Sum_probs=177.7

Q ss_pred             cHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cCCC
Q 009673          115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH  192 (529)
Q Consensus       115 ~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~pG  192 (529)
                      +|.|.+|+...+.+..+.|.|.           ++|-...+.+.+++..-. .  + -.++|||+|+..++..-  .---
T Consensus        71 ~p~V~~Av~~~l~~G~~fg~Pt-----------e~Ei~~Aell~~~~p~~e-~--v-rfvnSGTEAtmsAiRlARa~TgR  135 (432)
T COG0001          71 HPAVVEAVQEQLERGLSFGAPT-----------ELEVELAELLIERVPSIE-K--V-RFVNSGTEATMSAIRLARAYTGR  135 (432)
T ss_pred             CHHHHHHHHHHHHhcCCCCCCC-----------HHHHHHHHHHHHhcCccc-E--E-EEecchhHHHHHHHHHHHHhhCC
Confidence            6789999999998887766654           334445588888887732 1  2 23589999999888643  2234


Q ss_pred             CEEEEcCCCCCccccccccccccc------cccccce----EEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEc--
Q 009673          193 DRIMGLDLPHGGHLSHGFMTPKRR------VSGTSIY----FESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAG--  258 (529)
Q Consensus       193 D~Vl~~~~~~~g~~s~g~~~~~~~------i~~~g~~----~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~~--  258 (529)
                      |+|+...-.|-||...........      ....|.-    -..+.++      .-|++.+++++++.  +...||+.  
T Consensus       136 ~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~------yND~~al~~~~~~~g~~IAaVIvEPv  209 (432)
T COG0001         136 DKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLP------YNDLEALEEAFEEYGDDIAAVIVEPV  209 (432)
T ss_pred             CeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEec------CCCHHHHHHHHHHcCCcEEEEEeccc
Confidence            788888766555532111100000      0001100    0111222      34899999999875  44567765  


Q ss_pred             CCCCCCCC----CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccc-cCCCCeEEEeeCCCcc
Q 009673          259 ASAYPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPVL  332 (529)
Q Consensus       259 ~s~~p~~~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l-~GprgG~i~~~~~~~~  332 (529)
                      ..|.+.+.    -++.|+++|++||++||.|+.+...-+..+....-+. ..|+.+.+  |.+ .|...|.+-+++    
T Consensus       210 ~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDlttlG--KiIGGGlP~ga~gGr~----  283 (432)
T COG0001         210 AGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDLTTLG--KIIGGGLPIGAFGGRA----  283 (432)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcchhhhh--hhhcCCcceeeeccHH----
Confidence            23433322    3789999999999999999985422222121111111 35776654  988 456778888888    


Q ss_pred             hhHHHhhhcccccCCCCCCC--hHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cCcEEecCCCCCce
Q 009673          333 GVELESAINNAVFPGLQGGP--HNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLVSGGSDNHL  406 (529)
Q Consensus       333 ~~~l~~~i~~~~~p~~~g~p--~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~~v~~~gt~~~~  406 (529)
                        ++.+.+...-.-+..|+.  +..+++|-.++++++.+.+  ...+++.+..+.|.+.|++    .|+++......+.+
T Consensus       284 --eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~--~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~  359 (432)
T COG0001         284 --EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEE--GVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMF  359 (432)
T ss_pred             --HHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceE
Confidence              777766543211111221  2334455445777766421  1234444555666665544    67765542222222


Q ss_pred             E--EEccCCCCC------cH---HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          407 V--LVDLRPMGI------DG---ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       407 ~--~v~~~~~~i------~~---~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      .  +.+..+...      +.   ..+...|.+.||.+.+    +.   +  ...=+|      .-++++|+++..+++.+
T Consensus       360 ~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~p----s~---~--ea~flS------~ahte~di~~~~~a~~~  424 (432)
T COG0001         360 GIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAP----SQ---F--EAGFLS------TAHTEEDIDRTLEAADE  424 (432)
T ss_pred             EEEecCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccCC----cc---c--cceeee------cccCHHHHHHHHHHHHH
Confidence            2  112111110      11   1233466778999832    21   1  111222      23679999999999998


Q ss_pred             HHHHH
Q 009673          476 GVEIT  480 (529)
Q Consensus       476 ~~~~~  480 (529)
                      +++..
T Consensus       425 ~~~~~  429 (432)
T COG0001         425 AFKEL  429 (432)
T ss_pred             HHHHh
Confidence            77643

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=99.37  E-value=7.7e-10  Score=117.43  Aligned_cols=320  Identities=17%  Similarity=0.133  Sum_probs=169.3

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---  189 (529)
                      .-.|+|.+|+...+.+-.   +. .+++. ++.    .....+++.+++....+   .....+|||+|+..++....   
T Consensus        91 h~hp~v~~Av~~ql~~l~---~~-~~~~~-~~~----~~~lAe~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~t  158 (442)
T TIGR03372        91 HRNPNVIAAVENQLAKQP---LH-SQELL-DPL----RALLAKTLAALTPGKLK---YSFFCNSGTESVEAALKLAKAYQ  158 (442)
T ss_pred             CCCHHHHHHHHHHHHhCC---Cc-ccccC-CHH----HHHHHHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHHH
Confidence            457899999987775321   11 12221 221    11233667777643322   23456899999998876431   


Q ss_pred             -CCC-CEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCC---CCCCHHHHHHHhhh-----cCCcEEEEc
Q 009673          190 -KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAIL-----FRPKLIIAG  258 (529)
Q Consensus       190 -~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~~---~~iD~d~le~~i~~-----~~pklIi~~  258 (529)
                       +.| .+|+...-.|-|... +      .+...+.. +.....++.+.-   -..|.+.+++.++.     .+..+||+.
T Consensus       159 ~~~gr~~ii~~~~~yHG~t~-~------~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvE  231 (442)
T TIGR03372       159 SPRGKFTFIAASGAFHGKSL-G------ALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILE  231 (442)
T ss_pred             hhcCCcEEEEECCCccCCCH-H------HhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEe
Confidence             123 578877654422210 1      11111110 000000010000   02367777776642     234566665


Q ss_pred             C--CCCCCCCC----HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccccCC--CCeEEEee
Q 009673          259 A--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP--RGGMIFFK  327 (529)
Q Consensus       259 ~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~Gp--rgG~i~~~  327 (529)
                      .  ++.+...+    +++++++|++||+++|+|++|. |+--.|.. . .-.. ..|+++  +.|.++|.  ..|.++++
T Consensus       232 pv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDivt--~gK~lg~G~~Pigavv~~  308 (442)
T TIGR03372       232 PIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT-GMGRTGKMFACEHEGVQPDILC--LAKALGGGVMPIGATIAT  308 (442)
T ss_pred             CccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeccc-CCCccccchhhhhcCCCCCeee--ehhhhcCCcccceEEEec
Confidence            2  22223444    8999999999999999999983 43211211 0 0011 368887  56999542  46666677


Q ss_pred             CCCcchhHHHhhhccc--ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcE-Eec--C
Q 009673          328 KDPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYK-LVS--G  400 (529)
Q Consensus       328 ~~~~~~~~l~~~i~~~--~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~-v~~--~  400 (529)
                      +      ++.+.+...  .+..+.++... ..++..++|+.+.+++   ..++..+..++|.+.|++.  .++ .+.  .
T Consensus       309 ~------~i~~~~~~~~~~~~~T~~gnp~-~~Aaa~a~L~~i~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vR  378 (442)
T TIGR03372       309 E------AVFSVLFDNPFLHTTTFGGNPL-ACAAALATINELLEKN---LPAQAAIKGDFLLDGFQQLAAEYPDLIIEAR  378 (442)
T ss_pred             H------HHHHhhhccCccccCCCCCCHH-HHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhCCCceEEEe
Confidence            6      566555221  22233344333 3333334677665433   3455666677777777653  122 111  1


Q ss_pred             CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          401 GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       401 gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      | ...+.-+.+.... ....+.+.|.+.||.+... .|      ....+||..|. +   ++++|++++.+++.+++
T Consensus       379 G-~Gl~~giel~~~~-~~~~i~~~l~~~Gvl~~~~-~~------~~~~lr~~Ppl-~---~t~~~id~~~~~l~~~~  442 (442)
T TIGR03372       379 G-KGLLMAIEFRDNE-IGYAFAKELFQQNILVAGT-LN------NAKSIRIEPPL-T---ITIEQCALVIKAAKDAL  442 (442)
T ss_pred             c-ceEEEEEEeCChH-HHHHHHHHHHHCCcEEeec-CC------CCCEEEEECCc-c---cCHHHHHHHHHHHHHhC
Confidence            1 2234444443221 2355777788899998532 11      13579997553 3   67999999999998753

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=99.36  E-value=1.3e-09  Score=117.69  Aligned_cols=324  Identities=13%  Similarity=0.096  Sum_probs=170.2

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC-CCCCCCceeeecCChHHHHHHHHHhhc--
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGSPANFEVYTAIL--  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g-~~~~~~~~~V~~~sGs~A~~~~l~all--  189 (529)
                      .-.|.|.+|+...+.. +......  +...++...++    .+++.+++. .+.+   .....+||++|+.+++....  
T Consensus       105 h~hp~v~~Av~~ql~~-~~~~~~~--~~~~~~~~~~l----ae~L~~~~~~~~~~---~v~f~~SGsEA~e~AlKlAr~~  174 (504)
T PLN02760        105 GSEPRLVAAATEQLNK-LPFYHSF--WNRTTKPSLDL----AKELLEMFTARKMG---KVFFTNSGSEANDTQVKLVWYY  174 (504)
T ss_pred             CCCHHHHHHHHHHHhh-ccceecc--cccCcHHHHHH----HHHHHhhcCCCCCC---EEEEeCChHHHHHHHHHHHHHH
Confidence            3479999999887743 3211110  01112222222    256666643 2222   12446899999999887652  


Q ss_pred             -----CCC-CEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccC-----CCCC-----CCCHH
Q 009673          190 -----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLD-----ESTG-----LVDYD  241 (529)
Q Consensus       190 -----~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~------------~~~~v~~~v~-----~~~~-----~iD~d  241 (529)
                           .+| .+|+..+-.|-|.. .+      .+++.|.            .+..+++|..     +...     ...++
T Consensus       175 ~~~~g~~~r~~iI~~~~~yHG~t-~~------a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  247 (504)
T PLN02760        175 NNALGRPNKKKFIARSKSYHGST-LI------SASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLAD  247 (504)
T ss_pred             HHhcCCCCCcEEEEECCCccCCh-Hh------hhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHH
Confidence                 233 57777765432221 01      1111111            0111121100     0000     01134


Q ss_pred             HHHHHhhh---cCCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEeccc-ccccccccccCCCCC-cccEEEe
Q 009673          242 MLEKTAIL---FRPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAH-ISGLVAASVVADPFK-YCDVVTT  310 (529)
Q Consensus       242 ~le~~i~~---~~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah-~~Gli~~~~~~~~~~-~aDiv~~  310 (529)
                      ++++.+..   .++.+||+..  .+.+...+    +++|+++|++||+++|+|++| .+|-........-+. ..|++++
T Consensus       248 ~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivtl  327 (504)
T PLN02760        248 NLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSL  327 (504)
T ss_pred             HHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEEe
Confidence            57776642   1345666652  22223444    999999999999999999998 344432211000011 3687766


Q ss_pred             cccccccCC--CCeEEEeeCCCcchhHHHhhhccc-------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 009673          311 TTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS  381 (529)
Q Consensus       311 S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~-------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~  381 (529)
                      +  |.++|.  ..|.+++++      ++.+.+...       ...++.++... .+++..++|+.+.++   +..+++.+
T Consensus       328 g--K~lggG~~PigAv~~~~------~i~d~~~~~~~~~~~~~h~~T~~gnPl-~~Aaala~Le~i~~~---~l~~~~~~  395 (504)
T PLN02760        328 A--KALSSAYMPIGAVLVSP------EISDVIHSQSNKLGSFAHGFTYSGHPV-SCAVALEALKIYKER---NIPEHVNK  395 (504)
T ss_pred             c--ccccCCccccceEeecH------HHHhhhhcccccccCcccCCCCCCCHH-HHHHHHHHHHHHHhC---CHHHHHHH
Confidence            4  999652  455677776      566655321       12233445333 333333467766543   34667777


Q ss_pred             HHHHHHHHHHhc-CcEEecC--CCCCceEEEccCCCC-----C--c---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCe
Q 009673          382 NCRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMG-----I--D---GARVEKILDMASITLNKNSVPGDKSALVPGG  448 (529)
Q Consensus       382 ~a~~l~~~L~~~-G~~v~~~--gt~~~~~~v~~~~~~-----i--~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~  448 (529)
                      +.++|.+.|++. ...++..  |. .-+.-+.+....     .  +   ...+.+.|.+.||.+...          ...
T Consensus       396 ~g~~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----------g~~  464 (504)
T PLN02760        396 IAPRFQDGIKAFSGSPIIGEIRGT-GLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVA----------GDN  464 (504)
T ss_pred             HHHHHHHHHHHHhcCCCeeeEEeC-ceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEec----------CCE
Confidence            777888877662 1222211  11 122223332110     0  0   234667778899998421          246


Q ss_pred             EEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          449 IRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       449 iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      +|++.| ++   ++++|++++.+++.+++...
T Consensus       465 lrl~Pp-l~---it~eeid~~~~~l~~al~~~  492 (504)
T PLN02760        465 IMMSPP-LI---ITPEEVDELISIYGKALKAT  492 (504)
T ss_pred             EEEECC-CC---CCHHHHHHHHHHHHHHHHHH
Confidence            899755 33   66999999999999988643

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=99.36  E-value=1.4e-09  Score=115.97  Aligned_cols=330  Identities=15%  Similarity=0.051  Sum_probs=174.1

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-c-C
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-L-K  190 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l-~  190 (529)
                      .-.|.|.+|+...+.... .  ....++ .++.  .+|  ..+++.+++....+   -....+|||+|+..++... . .
T Consensus        57 h~~p~v~~Ai~~ql~~~~-~--~~~~~~-~~~~--~~~--la~~L~~~~p~~~~---~v~f~~sGsEAve~AlklAr~~t  125 (443)
T PRK08360         57 HNNPRVVKAIKEQTDKLI-H--YTPIYG-FPVE--PLL--LAEKLIEIAPGDNP---KVSFGLSGSDANDGAIKFARAYT  125 (443)
T ss_pred             CCCHHHHHHHHHHHHhcc-C--cccccc-CcHH--HHH--HHHHHHHhCCCCCC---EEEEcCCHHHHHHHHHHHHHHhc
Confidence            357889999887775321 1  111111 1221  122  23667777654322   1345689999999887643 2 2


Q ss_pred             CCCEEEEcCCCC-Cccccccccccccccc--ccc--ceEEEEEcccCCC-CCC--------CCHHHHHHHhhh----cCC
Q 009673          191 PHDRIMGLDLPH-GGHLSHGFMTPKRRVS--GTS--IYFESMPYRLDES-TGL--------VDYDMLEKTAIL----FRP  252 (529)
Q Consensus       191 pGD~Vl~~~~~~-~g~~s~g~~~~~~~i~--~~g--~~~~~v~~~v~~~-~~~--------iD~d~le~~i~~----~~p  252 (529)
                      ...+|+...-.| |.+......+......  ..+  ..+..++++-... .+.        .+.+.+++.+..    .++
T Consensus       126 gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i  205 (443)
T PRK08360        126 KRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGV  205 (443)
T ss_pred             CCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCe
Confidence            234666665433 3221100000000000  000  0012223221000 000        234556666642    357


Q ss_pred             cEEEEcCCCCCC--CC----CHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccc-cCCCCe
Q 009673          253 KLIIAGASAYPR--DF----DYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSL-RGPRGG  322 (529)
Q Consensus       253 klIi~~~s~~p~--~~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l-~GprgG  322 (529)
                      ++|++....+++  ..    -+++|.++|++||+++|+|++|. |+...+.. . ..+. ..|+++  ++|.+ +|++.|
T Consensus       206 AAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~gr~G~~~a~~~~~~~pDiit--lsK~l~~G~pig  282 (443)
T PRK08360        206 AALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQS-GLGRTGKWFAIEHFGVEPDIIT--LGKPLGGGLPIS  282 (443)
T ss_pred             EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCccchhhhhcCCCCCEEE--ecccccCCceeE
Confidence            888887432332  22    28899999999999999999965 44322321 1 0111 357764  57998 567889


Q ss_pred             EEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEecC
Q 009673          323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSG  400 (529)
Q Consensus       323 ~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~~  400 (529)
                      ++++++      ++.+.+......+..+++.....++ ..+++.+.+.+   ..+++.++.++|.+.|++.  .+.++..
T Consensus       283 av~~~~------~i~~~~~~~~~~~T~~~~p~~~aaa-~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~~  352 (443)
T PRK08360        283 ATIGRA------EIMDSLPPLAHAFTLSGNPVASAAA-LAVIEEIEEKN---LLKRAEKLGNYTKKRLEEMKKKHELIGD  352 (443)
T ss_pred             EEEEcH------HHHhhhcCCCCCCCCCcCHHHHHHH-HHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHHhCCCeee
Confidence            999987      6777665432333344444443333 34676654433   4566666677777777652  2332221


Q ss_pred             --CCCCceEEEccCCC----CCc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673          401 --GSDNHLVLVDLRPM----GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD  471 (529)
Q Consensus       401 --gt~~~~~~v~~~~~----~i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~  471 (529)
                        + ..-++-+.+...    .-+   ...+...|.++||.+...         ....+|+..+..    ++++|++++.+
T Consensus       353 vrg-~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---------~~~~lr~~P~l~----~t~~~id~~~~  418 (443)
T PRK08360        353 VRG-IGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFF---------SGNVLRIQPPLT----IEKEVLDEGLD  418 (443)
T ss_pred             eec-cceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeec---------CCCEEEEeCCCC----CCHHHHHHHHH
Confidence              1 112222333211    001   234667788899998431         136799975533    67999999999


Q ss_pred             HHHHHHHHH
Q 009673          472 FIHEGVEIT  480 (529)
Q Consensus       472 ~i~~~~~~~  480 (529)
                      .+.+++...
T Consensus       419 ~l~~~l~~~  427 (443)
T PRK08360        419 ILEEAIEDV  427 (443)
T ss_pred             HHHHHHHHH
Confidence            999998753

>PRK12403 putative aminotransferase; Provisional

Probab=99.36  E-value=9.1e-10  Score=117.84  Aligned_cols=321  Identities=17%  Similarity=0.137  Sum_probs=163.6

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCC-CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc--
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYG-GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~-g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--  189 (529)
                      .-.|+|.+|+...+.. +..+.   .++. .++...+++    ++++++++-..+   ..+..+||++|+.+++....  
T Consensus        70 h~hp~v~~A~~~q~~~-~~~~~---~~~~~~~~~~~~la----e~L~~~~p~~~~---~v~f~~SGseA~e~AiklAr~~  138 (460)
T PRK12403         70 YGRKDLAAAAARQMEQ-LPYYN---MFFHTTHPAVIELS----ELLFSLLPGHYS---HAIYTNSGSEANEVLIRTVRRY  138 (460)
T ss_pred             CCCHHHHHHHHHHHHh-CCCee---cccccCCHHHHHHH----HHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHH
Confidence            3468899998877743 32211   1222 223223333    677777763322   23556899999999887653  


Q ss_pred             -----CCCCEEE-EcCCC-CCccccccccccccccccccce-----------EEEEEcccC-CCCCC--------CCHHH
Q 009673          190 -----KPHDRIM-GLDLP-HGGHLSHGFMTPKRRVSGTSIY-----------FESMPYRLD-ESTGL--------VDYDM  242 (529)
Q Consensus       190 -----~pGD~Vl-~~~~~-~~g~~s~g~~~~~~~i~~~g~~-----------~~~v~~~v~-~~~~~--------iD~d~  242 (529)
                           ++++.++ ...-. ||..+  +      .++..+..           +..++++.. ...+.        .+.++
T Consensus       139 ~~~~g~~~r~~ii~~~~~yHG~t~--~------~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  210 (460)
T PRK12403        139 WQVLGKPQKKIMIGRWNGYHGSTL--A------ATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQ  210 (460)
T ss_pred             HHhhCCCCCcEEEEECCCcCcccH--h------hhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHH
Confidence                 3444444 33322 33211  0      11111110           111221110 00001        11355


Q ss_pred             HHHHhhh---cCCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEecccccccccccc--cCCCCC-cccEEEe
Q 009673          243 LEKTAIL---FRPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASV--VADPFK-YCDVVTT  310 (529)
Q Consensus       243 le~~i~~---~~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~--~~~~~~-~aDiv~~  310 (529)
                      +++.+.+   .+..+||+..  ++.+...+    +++++++|++||+++|+|++|. |+--.|.  ...-+. ..|+++ 
T Consensus       211 le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~t-GfGRtG~~~a~e~~gv~PDiv~-  288 (460)
T PRK12403        211 LEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIG-GFGRTGEWFAHEHFGFEPDTLS-  288 (460)
T ss_pred             HHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhhhhhcCCCCCeEE-
Confidence            6655532   1345666652  22223344    9999999999999999999983 3311111  001111 358887 


Q ss_pred             cccccccCC--CCeEEEeeCCCcchhHHHhhhccc--c--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHH-HHH
Q 009673          311 TTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA--V--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV-SNC  383 (529)
Q Consensus       311 S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~--~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~-~~a  383 (529)
                       +.|.|+|.  ..|.+++++      ++.+.+...  .  ..++.+++ ....++..++|+.+.+++   ..+++. ++.
T Consensus       289 -~gK~lggG~~Piga~v~~~------~i~~~~~~~~~~~~~~~T~~gn-Pl~~Aaala~L~~i~~~~---l~~~~~~~~g  357 (460)
T PRK12403        289 -IAKGLTSGYVPMGGLVLSK------RIAEALVEQGGVFAHGLTYSGH-PVAAAVAIANLKALRDEG---VVTRVKDDTG  357 (460)
T ss_pred             -EcccccccccceEEEEECH------HHHHHHhcCCCccccCCCCCCC-HHHHHHHHHHHHHHHhcc---HHHHHHHHHH
Confidence             56998543  345555666      565554321  1  12233443 334444444677665433   355554 566


Q ss_pred             HHHHHHHHhc--CcEEecC--CCCCceEEEccCCCC-----Cc-----HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeE
Q 009673          384 RALASRLVEL--GYKLVSG--GSDNHLVLVDLRPMG-----ID-----GARVEKILDMASITLNKNSVPGDKSALVPGGI  449 (529)
Q Consensus       384 ~~l~~~L~~~--G~~v~~~--gt~~~~~~v~~~~~~-----i~-----~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~i  449 (529)
                      ++|.+.|++.  .+.++..  |. ..+.-+.+....     .+     ...+...+.+.||.+...          .+.+
T Consensus       358 ~~l~~~L~~l~~~~~~i~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------~~~~  426 (460)
T PRK12403        358 PYLQRCLREVFGDHPLVGEVQGA-GLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST----------LGRM  426 (460)
T ss_pred             HHHHHHHHHHHhcCCCEEeEeec-ceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEec----------CCEE
Confidence            7777777541  2222221  11 122223332110     01     122445567799998421          1358


Q ss_pred             EEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          450 RIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       450 Rig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      |+.. .++   ++++|++++++.+++++...
T Consensus       427 ~l~P-pl~---it~~eid~~~~~l~~al~~~  453 (460)
T PRK12403        427 IMAP-ALV---AGRAEIDELVDKTRIAVDRT  453 (460)
T ss_pred             EEEC-CCC---CCHHHHHHHHHHHHHHHHHH
Confidence            8864 444   57999999999999998753

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=99.35  E-value=6.6e-11  Score=120.00  Aligned_cols=228  Identities=18%  Similarity=0.165  Sum_probs=142.1

Q ss_pred             CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh
Q 009673          110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI  188 (529)
Q Consensus       110 sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g-~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al  188 (529)
                      +.+..++++++++...+. .|.+    ..|+-+ ..+...+... .+.++..+|.+..     +.++.-+.|++.++.++
T Consensus        35 G~s~~~~e~iea~~~~~~-~~v~----Le~~l~~g~~~~R~~~~-~~~~~~~~~aea~-----~ivnnn~aAVll~~~al  103 (395)
T COG1921          35 GRSLYSPEAIEAMKEAMR-APVE----LETDLKTGKRGARLTEL-AELLCGLTGAEAA-----AIVNNNAAAVLLTLNAL  103 (395)
T ss_pred             CCccCCHHHHHHHHHHhc-ccce----eeeecccchhhHHHHHH-HHHHhcccchhhe-----eeECCcHHHHHHHHhhh
Confidence            556789999999987664 2221    112111 1223333322 2344444554442     22345558888888888


Q ss_pred             cCCCCEEEEcCCCC-CccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEE-cCCCCCC--
Q 009673          189 LKPHDRIMGLDLPH-GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA-GASAYPR--  264 (529)
Q Consensus       189 l~pGD~Vl~~~~~~-~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~-~~s~~p~--  264 (529)
                      ..++..|+..-+.- |+++.-.     ..+...|+  +.+.++   .+..-...+++.+|.+ ++++++= -++||+.  
T Consensus       104 ~~~~EvVis~g~lV~gg~~~v~-----d~~~~aG~--~l~EvG---~tn~t~~~d~~~AIne-~ta~llkV~s~~~~f~~  172 (395)
T COG1921         104 AEGKEVVVSRGELVEGGAFRVP-----DIIRLAGA--KLVEVG---TTNRTHLKDYELAINE-NTALLLKVHSSNYGFTG  172 (395)
T ss_pred             ccCCeEEEEccccccCCCCChh-----HHHHHcCC--EEEEec---ccCcCCHHHHHHHhcc-CCeeEEEEeeccccccc
Confidence            87556665433322 3443211     24456665  556654   2356677888999988 7887654 3566654  


Q ss_pred             CCCHHHHHHHHHHhCCEEEEecccccccccccccCC--C-C-CcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhh
Q 009673          265 DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--P-F-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAI  340 (529)
Q Consensus       265 ~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~-~-~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i  340 (529)
                      ..+.+++.+||+++|+++++|.+  +|..... .+.  + + .++|+|++|.+|.|.||++|+|++++      ++++++
T Consensus       173 ~l~~~~l~~ia~~~~lpvivD~a--Sg~~v~~-e~~l~~~la~GaDLV~~SgdKllgGPqaGii~GkK------elI~~l  243 (395)
T COG1921         173 MLSEEELVEIAHEKGLPVIVDLA--SGALVDK-EPDLREALALGADLVSFSGDKLLGGPQAGIIVGKK------ELIEKL  243 (395)
T ss_pred             cccHHHHHHHHHHcCCCEEEecC--Ccccccc-ccchhHHHhcCCCEEEEecchhcCCCccceEechH------HHHHHH
Confidence            56788899999999999999986  4432111 111  1 1 28999999999999999999999999      788877


Q ss_pred             ccccc--CCCCCCChHHHHHHHHHHHHHhcCch
Q 009673          341 NNAVF--PGLQGGPHNHTIGGLAVCLKHAQSPE  371 (529)
Q Consensus       341 ~~~~~--p~~~g~p~~~~iaala~al~~~~~~~  371 (529)
                      .+...  ..-.+   -..++++..+|+.....+
T Consensus       244 q~~~l~Ralrv~---K~tla~l~~aLe~y~~~~  273 (395)
T COG1921         244 QSHPLKRALRVD---KETLAALEAALELYLQPE  273 (395)
T ss_pred             HhhhhhhhhhcC---cHhHHHHHHHHHHHcCch
Confidence            65321  11122   236778888888776543

>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]

Probab=99.34  E-value=4.1e-10  Score=112.05  Aligned_cols=307  Identities=17%  Similarity=0.170  Sum_probs=180.3

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhh-cCC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI-LKP  191 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~al-l~p  191 (529)
                      .|..+++.....|..-  .|..|  .|...+-+.-+++.+.+.+.++=| .+.+| -+|..|+|+ .|+..++.-+ ..+
T Consensus        87 fp~Dai~RA~~~L~~~--gGs~G--aYS~SqGv~~vR~~VA~~I~rRDG-~p~~p-~dI~LT~GAS~ai~~il~l~~~~~  160 (475)
T KOG0258|consen   87 FPTDAIKRAKRILNDC--GGSLG--AYSDSQGVPGVRKHVAEFIERRDG-IPADP-EDIFLTTGASPAIRSILSLLIAGK  160 (475)
T ss_pred             CCHHHHHHHHHHHHhc--CCccc--ccccccCChhHHHHHHHHHHhccC-CCCCH-HHeeecCCCcHHHHHHHHHHhcCC
Confidence            4555555555555421  22222  233334455566666677788878 44445 468889987 7887777766 468


Q ss_pred             CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhh----cCCcEEEEcCCCCCC--
Q 009673          192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAIL----FRPKLIIAGASAYPR--  264 (529)
Q Consensus       192 GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~----~~pklIi~~~s~~p~--  264 (529)
                      .|-||++-|.|+        .|...+...|.  ..++|-+|++ +|.+|.++|++.+.+    .+|+++++-+|.||+  
T Consensus       161 ~~GvliPiPQYP--------LYsAti~l~~~--~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGq  230 (475)
T KOG0258|consen  161 KTGVLIPIPQYP--------LYSATISLLGG--TQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQ  230 (475)
T ss_pred             CCceEeecCCCc--------hhHHHHHHhCC--cccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccch
Confidence            899999988553        33334555554  5667778865 489999999887654    467877666788887  


Q ss_pred             ---CCCHHHHHHHHHHhCCEEEEecccccccccccc-cCCCC---------Cccc----EEEecccccc---cCCCCeEE
Q 009673          265 ---DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF---------KYCD----VVTTTTHKSL---RGPRGGMI  324 (529)
Q Consensus       265 ---~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~~---------~~aD----iv~~S~hK~l---~GprgG~i  324 (529)
                         ...+++|..+|.+.|++|+.|+.+ -..++.+. .-..|         .+.|    +...|+||.+   +|.|||+.
T Consensus       231 vls~e~ie~i~~fa~~~~l~llaDEVY-Q~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYm  309 (475)
T KOG0258|consen  231 VLSEENIEGIICFAAEEGLVLLADEVY-QDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYM  309 (475)
T ss_pred             hhcHHHHHHHHHHHHHcCeEEechHHH-HhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCee
Confidence               457999999999999999999873 33333321 00011         1332    3445777876   78999986


Q ss_pred             EeeC-CCcchhHHHhhh--------------cccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Q 009673          325 FFKK-DPVLGVELESAI--------------NNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR  389 (529)
Q Consensus       325 ~~~~-~~~~~~~l~~~i--------------~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~  389 (529)
                      =.-. .......+.+.+              +..+.|..-|.+.+....+           +-....+.+..+++.+.+.
T Consensus       310 Ev~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~-----------Ekd~il~~l~~ra~l~~~~  378 (475)
T KOG0258|consen  310 ESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSS-----------EKDGILSSLRSRAKLTEDA  378 (475)
T ss_pred             ecccCChhHHHHHHHHHhhhhcCCccchhhhceecCCCCCCCcchhhhhh-----------hhHhHHHHHHHHhHHHHHH
Confidence            4322 110000111111              1112222334444433321           1133455666778888888


Q ss_pred             HHh-cCcEEecCCCCCceEE--EccCC--------CCCcHHH--HHHhHhcCCeEEcCCCCCCCCCCCCC--CeEEEcc
Q 009673          390 LVE-LGYKLVSGGSDNHLVL--VDLRP--------MGIDGAR--VEKILDMASITLNKNSVPGDKSALVP--GGIRIGS  453 (529)
Q Consensus       390 L~~-~G~~v~~~gt~~~~~~--v~~~~--------~~i~~~~--~~~~L~~~GI~v~~~~~Pg~~~~~~~--~~iRig~  453 (529)
                      +++ .|+.+.... ...+.+  ++++.        .++..+.  +.++|++.||.+    +||......+  -++|..+
T Consensus       379 ~ns~~gi~cn~~q-GAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcv----VPGSGFGQ~~GtyH~R~Ti  452 (475)
T KOG0258|consen  379 FNSLEGISCNPVQ-GAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICV----VPGSGFGQKEGTYHFRTTI  452 (475)
T ss_pred             HhhcCceeeccCc-cceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEE----ecCCCCCCCCceeEEEEee
Confidence            888 588776531 122222  23322        2333333  568899999999    7776533333  3688754

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=99.34  E-value=1.6e-09  Score=114.87  Aligned_cols=322  Identities=14%  Similarity=0.079  Sum_probs=172.5

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHHHHhh-cC
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAI-LK  190 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs~A~~~~l~al-l~  190 (529)
                      .-.|.|.+|+...+.+ ...  .....+. ++  ..++ ++ +++.+++... .+   ..+..+|||+|+..++... .-
T Consensus        56 h~~p~v~~ai~~ql~~-~~~--~~~~~~~-~~--~~~~-la-~~l~~~~p~~~~~---~~~f~~sGseA~e~AlklAr~~  124 (421)
T PRK06777         56 HRHPKVVAAVRQQLDQ-FTH--TAYQIVP-YA--SYVT-LA-ERINALAPIDGPA---KTAFFTTGAEAVENAVKIARAY  124 (421)
T ss_pred             CCCHHHHHHHHHHHhh-ccc--ccccccC-Ch--HHHH-HH-HHHHHhCCCCCCc---eEEEeCCcHHHHHHHHHHHHHh
Confidence            3478888888877653 211  1100011 11  1222 33 5666766431 12   1344689999999887643 22


Q ss_pred             CC-CEEEEcCCCCCccccccccccccccccccc-------------eEEEEEcccCCC--CCCCCHHHHHHHhhh----c
Q 009673          191 PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDES--TGLVDYDMLEKTAIL----F  250 (529)
Q Consensus       191 pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~-------------~~~~v~~~v~~~--~~~iD~d~le~~i~~----~  250 (529)
                      .| .+|+...-.|-|.- .+      .++..+.             .+..++++-...  ....|++.+++.+..    .
T Consensus       125 tgr~~ii~~~~~yHG~t-~~------~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~  197 (421)
T PRK06777        125 TGRPGVIAFGGAFHGRT-LL------TMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPD  197 (421)
T ss_pred             hCCCeEEEEcCCcCCcc-HH------HHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCC
Confidence            23 46777765442221 01      0111110             011112221000  011246677777752    2


Q ss_pred             CCcEEEEcCC-CCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEecccccc-cCCC
Q 009673          251 RPKLIIAGAS-AYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPR  320 (529)
Q Consensus       251 ~pklIi~~~s-~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l-~Gpr  320 (529)
                      +..+|++... +..+  ..+   +++|+++|++||+++|+|++|. |+...+...  ..++ ..|++  +++|.+ +|++
T Consensus       198 ~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~pDiv--~~sK~l~~G~p  274 (421)
T PRK06777        198 QVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQT-GFARTGKLFAMEYYDVKPDLI--TMAKSLGGGMP  274 (421)
T ss_pred             ceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCccCCchhhhhhcCCCCCEE--eeehhhcCCCc
Confidence            3556776522 1122  233   8999999999999999999965 653333210  0011 35776  467998 5678


Q ss_pred             CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----Cc-
Q 009673          321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----GY-  395 (529)
Q Consensus       321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~----G~-  395 (529)
                      .|++++++      ++.+.+.......+.+++..... +..++|+.+.+   ++..+++.++.++|.+.|++.    ++ 
T Consensus       275 igav~~~~------~i~~~~~~~~~~~T~~~~p~~~a-aa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i  344 (421)
T PRK06777        275 ISAVVGRA------EVMDAPAPGGLGGTYAGNPLAVA-AALAVLDVIAE---EKLCQRALILGAHLVEVLEKAKASCPAI  344 (421)
T ss_pred             eEEEEEcH------HHHhccCCCCCCCCCCcCHHHHH-HHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence            89999987      67776654433334444444433 33446765543   345677777788888888763    21 


Q ss_pred             EEecCCCCCceEEEccCC--CCCc----HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHH
Q 009673          396 KLVSGGSDNHLVLVDLRP--MGID----GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI  469 (529)
Q Consensus       396 ~v~~~gt~~~~~~v~~~~--~~i~----~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~l  469 (529)
                      ..+.+ ... ++.+.+..  .+.+    ...+.+.|.+.||.+.    |+..  + .+.+||..| ++   +++++++++
T Consensus       345 ~~vrg-~G~-~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~----~~~~--~-g~~lr~~pp-l~---i~~~~i~~~  411 (421)
T PRK06777        345 VDIRA-RGS-MVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLL----SCGV--H-GNVIRFLYP-LT---IPDAQFSKA  411 (421)
T ss_pred             EEecC-ceE-EEEEEEecCccCCccHHHHHHHHHHHHhCCeEEe----ecCC--C-CCEEEEeCC-CC---CCHHHHHHH
Confidence            11222 112 22322221  1111    1234444667999984    3321  1 358999855 33   568999999


Q ss_pred             HHHHHHHHH
Q 009673          470 ADFIHEGVE  478 (529)
Q Consensus       470 a~~i~~~~~  478 (529)
                      +++|.+++.
T Consensus       412 ~~~l~~~l~  420 (421)
T PRK06777        412 LNILTRLLA  420 (421)
T ss_pred             HHHHHHHHh
Confidence            999988763

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=99.34  E-value=5.4e-09  Score=110.83  Aligned_cols=331  Identities=16%  Similarity=0.141  Sum_probs=173.7

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cC
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK  190 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~  190 (529)
                      .-.|.|.+|+...+.. ...  .....+ .++  ..++  ..+++.+++.-...+  -....+|||+|+..++...  ..
T Consensus        56 h~~p~v~~ai~~ql~~-l~~--~~~~~~-~~~--~~~~--la~~l~~~~p~~~~~--~v~f~~SGseA~e~AlklAr~~t  125 (425)
T PRK07495         56 HRHPRVIAAVKAQLDR-FTH--TCHQVV-PYE--NYVR--LAERLNALVPGDFAK--KTIFVTTGAEAVENAVKIARAAT  125 (425)
T ss_pred             CCCHHHHHHHHHHHhh-ccC--cccCcc-CCH--HHHH--HHHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHhh
Confidence            3578888888877653 211  100001 111  1222  336677776432111  1355689999999887643  22


Q ss_pred             CCCEEEEcCCCCCcc-ccc----cc-cccccccccccceEEEEEcccCCCCCC---CCHHHHHHHhhh----cCCcEEEE
Q 009673          191 PHDRIMGLDLPHGGH-LSH----GF-MTPKRRVSGTSIYFESMPYRLDESTGL---VDYDMLEKTAIL----FRPKLIIA  257 (529)
Q Consensus       191 pGD~Vl~~~~~~~g~-~s~----g~-~~~~~~i~~~g~~~~~v~~~v~~~~~~---iD~d~le~~i~~----~~pklIi~  257 (529)
                      ...+|+...-.|-|. +..    +. ........-.-..+..++++.+. .+.   -+++++++.+..    .++.+|++
T Consensus       126 gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~~~~~~~~~~iaavi~  204 (425)
T PRK07495        126 GRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDKLFKADVDPQRVAAIII  204 (425)
T ss_pred             CCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHHHHHhccCCCceEEEEE
Confidence            235777776544222 100    00 00000000000012233433221 111   124555666542    24667777


Q ss_pred             cCC-CCCC-C----CCHHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEEEecccccc-cCCCCeEEEee
Q 009673          258 GAS-AYPR-D----FDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSL-RGPRGGMIFFK  327 (529)
Q Consensus       258 ~~s-~~p~-~----~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv~~S~hK~l-~GprgG~i~~~  327 (529)
                      ... .+++ .    .-+++|+++|++||+++|+|++|. |+-..+..  ..... ..|+++  ++|.+ .|.+.|+++++
T Consensus       205 EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~a~~~~gv~pDi~t--lsK~l~~G~pigav~~~  281 (425)
T PRK07495        205 EPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQT-GFARTGKLFAMEHHEVAADLTT--MAKGLAGGFPLAAVTGR  281 (425)
T ss_pred             CCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-cCCcCCCceeecccCCCCCEEe--ehhhhcCCccceEEEEc
Confidence            622 2222 1    238899999999999999999964 54333311  00111 246655  56998 45678999998


Q ss_pred             CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEecC--CCC
Q 009673          328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSG--GSD  403 (529)
Q Consensus       328 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~~--gt~  403 (529)
                      +      ++.+.+.........+++.....+++ ++++.+...   ++.+++.+..++|.+.|++.  .+..+..  +. 
T Consensus       282 ~------~i~~~~~~~~~~~T~~~~pl~~aaa~-a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-  350 (425)
T PRK07495        282 A------EIMDAPGPGGLGGTYGGNPLGIAAAH-AVLDVIEEE---DLCERANQLGNRLKQRLASLRETVPEIADIRGP-  350 (425)
T ss_pred             H------HHHhccCCCCcCCCCCCCHHHHHHHH-HHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecC-
Confidence            7      67666654333333444444433333 457766543   34555666666777776552  1222211  21 


Q ss_pred             CceEEEccCCCC---Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          404 NHLVLVDLRPMG---ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       404 ~~~~~v~~~~~~---i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      ..+.++.+....   -+   ...+.+.+.+.|+.+...   |   + ....|||. |.++   ++++|+++++++|.+++
T Consensus       351 Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---g---~-~~~~~r~~-Ppl~---it~~~id~~~~~l~~~l  419 (425)
T PRK07495        351 GFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTC---G---V-HGNVIRFL-APIT---IQDDVFAEALDILEASI  419 (425)
T ss_pred             ceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeec---C---C-CCCEEEEe-CCCc---cCHHHHHHHHHHHHHHH
Confidence            344555553211   01   234666777899998431   1   1 13679996 4455   67999999999999998


Q ss_pred             HH
Q 009673          478 EI  479 (529)
Q Consensus       478 ~~  479 (529)
                      ..
T Consensus       420 ~~  421 (425)
T PRK07495        420 LE  421 (425)
T ss_pred             HH
Confidence            64

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=99.33  E-value=1.3e-10  Score=121.56  Aligned_cols=299  Identities=23%  Similarity=0.282  Sum_probs=184.1

Q ss_pred             HHHHHHHcCCCCCCCceeeecCChHHH---HHHHHHhhc-CCCC----EEEEcCCCCCccccccccccccccccccceEE
Q 009673          154 QKRALAAFNLDENKWGVNVQPLSGSPA---NFEVYTAIL-KPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE  225 (529)
Q Consensus       154 ~~~la~~~g~~~~~~~~~V~~~sGs~A---~~~~l~all-~pGD----~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~  225 (529)
                      .+++.+..|.|.    +..|+.||.++   -+.++.+.+ ..|+    ..|++.-.||.+..        ...+.|  .+
T Consensus       588 e~~Lc~iTG~D~----~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPA--------SA~Mag--mk  653 (1001)
T KOG2040|consen  588 EKDLCEITGFDS----FSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPA--------SAAMAG--MK  653 (1001)
T ss_pred             HHHhheeecccc----eeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChh--------hHHhcC--CE
Confidence            388999999987    57899999854   444666664 2332    34445444554421        223444  58


Q ss_pred             EEEcccCCCCCCCCHHHHHHHhhhcCC--cEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCC
Q 009673          226 SMPYRLDESTGLVDYDMLEKTAILFRP--KLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP  301 (529)
Q Consensus       226 ~v~~~v~~~~~~iD~d~le~~i~~~~p--klIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~  301 (529)
                      +++++++ .+|.||+.+|++.+++++-  .++.+.+|+.-+  ...+++++++.++||--|..|+|.--..+.  . -.|
T Consensus       654 vvpV~~~-~~G~id~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVG--l-c~p  729 (1001)
T KOG2040|consen  654 VVPVGCD-ANGNIDMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVG--L-CRP  729 (1001)
T ss_pred             EEEeecc-CCCCccHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCccceec--c-cCC
Confidence            8888887 5789999999999987543  456777765444  557999999999999999999875432221  1 122


Q ss_pred             CC-cccEEEecccccccC------CCCeEEEeeCCCcchhHHHhhhcc--cccC----------CCCCCC-hHHHHHHHH
Q 009673          302 FK-YCDVVTTTTHKSLRG------PRGGMIFFKKDPVLGVELESAINN--AVFP----------GLQGGP-HNHTIGGLA  361 (529)
Q Consensus       302 ~~-~aDiv~~S~hK~l~G------prgG~i~~~~~~~~~~~l~~~i~~--~~~p----------~~~g~p-~~~~iaala  361 (529)
                      -+ ++|+.--.+||+|+=      |..|-|.+++      .+...+-.  .+.+          .....| ....|..+.
T Consensus       730 Gd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~------HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpIS  803 (1001)
T KOG2040|consen  730 GDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK------HLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPIS  803 (1001)
T ss_pred             ccccccceeecccceeeecCCCCCCCCCccchhh------hccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhH
Confidence            22 789999999999843      3335565555      22222110  0000          001111 112233333


Q ss_pred             HH-HHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec-C--CCCCceEEEccCCC----CCcHHHHHHhHhcCCeEEc
Q 009673          362 VC-LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS-G--GSDNHLVLVDLRPM----GIDGARVEKILDMASITLN  433 (529)
Q Consensus       362 ~a-l~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~-~--gt~~~~~~v~~~~~----~i~~~~~~~~L~~~GI~v~  433 (529)
                      .+ ++.+...+++.-.+-..-|+.++.++|+.. ++++. +  +...|-+++|+++.    |+...++.++|.++|+...
T Consensus       804 waYikmMG~~GL~~as~~AiLNaNYMakRLe~h-Ykil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaP  882 (1001)
T KOG2040|consen  804 WAYIKMMGSGGLKDASKIAILNANYMAKRLESH-YKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAP  882 (1001)
T ss_pred             HHHHHHhcccccchhhHHHhhhhHHHHHHHhhc-cceeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCCCC
Confidence            33 455555666666777888999999999875 44443 2  34567788998753    5777889999999999864


Q ss_pred             CCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 009673          434 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGS  490 (529)
Q Consensus       434 ~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~~~~~~~~~  490 (529)
                      ..+.|      .++.+-|--    |..-+.+|+++.++++   +++-.++.+...|.
T Consensus       883 TmswP------V~gtLMIEP----TESE~k~ElDRfcdAl---iSIreEI~~ie~G~  926 (1001)
T KOG2040|consen  883 TMSWP------VAGTLMIEP----TESEDKAELDRFCDAL---ISIREEIAQIEEGR  926 (1001)
T ss_pred             ccccc------cCCceEecc----CccccHHHHHHHHHHH---HHHHHHHHHHHccC
Confidence            33333      344454431    1223456666666655   45555554444343

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=99.33  E-value=8.2e-10  Score=117.83  Aligned_cols=329  Identities=14%  Similarity=0.087  Sum_probs=169.8

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHH---hhc
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT---AIL  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~---all  189 (529)
                      .-.|+|.+|+...+.+ ...-...   ...++   ...+ ..+++.+.+......  .....+||++|+..++.   ...
T Consensus        72 h~~p~v~~ai~~q~~~-~~~~~~~---~~~~~---~~~~-la~~l~~~~p~~~~~--~v~f~~sGseA~e~AlklAr~~t  141 (443)
T PRK06058         72 NSAPRVVEAVREQVAR-FTHTCFM---VTPYE---GYVA-VAEQLNRLTPGDHEK--RSALFNSGAEAVENAVKIARSYT  141 (443)
T ss_pred             CCCHHHHHHHHHHHHh-ccCcccc---ccCCH---HHHH-HHHHHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHhh
Confidence            4578999998877753 2110000   01111   1122 336677776432111  13456899999998887   333


Q ss_pred             CCCCEEEEcCCCCCccccccccc-------cccccccccceEEEEEc--ccCC-CCCCCC--------HHHHHHHhhhcC
Q 009673          190 KPHDRIMGLDLPHGGHLSHGFMT-------PKRRVSGTSIYFESMPY--RLDE-STGLVD--------YDMLEKTAILFR  251 (529)
Q Consensus       190 ~pGD~Vl~~~~~~~g~~s~g~~~-------~~~~i~~~g~~~~~v~~--~v~~-~~~~iD--------~d~le~~i~~~~  251 (529)
                      + .++|+..+..|-|.-. +...       ........-.....+++  +.+. .....+        .+.+++.+...+
T Consensus       142 g-r~~ii~~~~~yHG~t~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  219 (443)
T PRK06058        142 G-RQAVVVFDHAYHGRTN-LTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADN  219 (443)
T ss_pred             C-CCeEEEECCCcCcChH-HHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCc
Confidence            3 3788888765433210 0000       00000000000111121  1110 001111        223334333235


Q ss_pred             CcEEEEcCC-CCCC-CC----CHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccc-cCCCC
Q 009673          252 PKLIIAGAS-AYPR-DF----DYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSL-RGPRG  321 (529)
Q Consensus       252 pklIi~~~s-~~p~-~~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l-~Gprg  321 (529)
                      +.+||+..- ..++ ..    -+++|+++|++||+++|+|+++. |+.-.|.. . .-+. ..|+++.+  |.+ .|.+.
T Consensus       220 iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfgRtG~~fa~~~~gv~PDiv~~g--K~l~~G~Pi  296 (443)
T PRK06058        220 LAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQT-GFARTGAWFACEHEGIVPDLITTA--KGIAGGLPL  296 (443)
T ss_pred             eEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcChhhhHHHhcCCCCCEEEEc--ccccCCCcc
Confidence            677777522 1222 22    38999999999999999999964 54222211 0 0011 35888775  998 45677


Q ss_pred             eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEec
Q 009673          322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS  399 (529)
Q Consensus       322 G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~  399 (529)
                      |++++++      ++.+.+......++.++.... .++..++|+.+.++   +..+++.+..++|.+.|++.  .+.++.
T Consensus       297 ~av~~~~------~i~~~~~~~~~~~T~~gnpl~-~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~  366 (443)
T PRK06058        297 SAVTGRA------EIMDAPHPGGLGGTYGGNPVA-CAAALAAIETIEED---DLVARARQIEALMTDRLRALAAEDDRIG  366 (443)
T ss_pred             EEEEEcH------HHHhhccCCCCCCCCCCCHHH-HHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHhhCCcEE
Confidence            8888887      676666543333334443333 44434467665443   34566666677788887662  123221


Q ss_pred             --CCCCCceEEEccCCC--CC-c---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673          400 --GGSDNHLVLVDLRPM--GI-D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD  471 (529)
Q Consensus       400 --~gt~~~~~~v~~~~~--~i-~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~  471 (529)
                        .|. ..+..+.+...  .. +   ...+.+.|.+.||.+..    +.  ++ ...||+..| ++   ++++|++++++
T Consensus       367 ~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~----~~--~~-~~~lr~~Pp-l~---~t~~~i~~~~~  434 (443)
T PRK06058        367 DVRGR-GAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLT----CG--TY-GNVIRLLPP-LV---IGDELLREGLD  434 (443)
T ss_pred             eeecc-ceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEec----cC--CC-CCEEEEECC-Cc---cCHHHHHHHHH
Confidence              121 22333333211  11 1   23355566789999843    21  11 257999644 33   67999999999


Q ss_pred             HHHHHHH
Q 009673          472 FIHEGVE  478 (529)
Q Consensus       472 ~i~~~~~  478 (529)
                      +|++++.
T Consensus       435 ~l~~~l~  441 (443)
T PRK06058        435 VLEAALA  441 (443)
T ss_pred             HHHHHHH
Confidence            9998875

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.33  E-value=5e-10  Score=126.15  Aligned_cols=274  Identities=13%  Similarity=0.069  Sum_probs=170.5

Q ss_pred             HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhh-c--CCCCEEEEcCCCCCccccccccccccccccccceEEEEE
Q 009673          153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI-L--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP  228 (529)
Q Consensus       153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~al-l--~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~  228 (529)
                      .+..+++++|++..    |.....++ .+..+++++. .  +++++|++++..|+......   .+ .....|  ++++.
T Consensus       114 ~Qt~i~eLtGm~~a----NaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~---~t-~a~~~g--~~v~~  183 (939)
T TIGR00461       114 FQTVVSDLTGLPVA----NASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVL---HT-RAKPFG--IEVIV  183 (939)
T ss_pred             HHHHHHHHHCCChh----hhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHH---HH-HHHhcC--cEEEE
Confidence            45889999999974    33334443 3333444453 2  34589999887765432110   00 112223  35544


Q ss_pred             cccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-ccc
Q 009673          229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD  306 (529)
Q Consensus       229 ~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aD  306 (529)
                      +         |+++|++.+   ++..+++.+|++-+ ..|+++|.++++++|++++++.-..+.    .....|-+ ++|
T Consensus       184 ~---------~~~~l~~~~---~~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al----~ll~~Pge~GaD  247 (939)
T TIGR00461       184 V---------DCSDIKKAV---DVFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMAL----TLLTPPGHYGAD  247 (939)
T ss_pred             E---------cHHHHhhcC---CEEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHh----CCcCCHHHcCCc
Confidence            3         445566555   35677777777665 669999999999999999997543222    22233433 799


Q ss_pred             EEEecccccc-----cCCCCeEEEeeCCCcchhHHHhhhc---------cc---ccCC-C----------CCCC---hHH
Q 009673          307 VVTTTTHKSL-----RGPRGGMIFFKKDPVLGVELESAIN---------NA---VFPG-L----------QGGP---HNH  355 (529)
Q Consensus       307 iv~~S~hK~l-----~GprgG~i~~~~~~~~~~~l~~~i~---------~~---~~p~-~----------~g~p---~~~  355 (529)
                      |++++.+++.     +||..|++.++++      +...+-         ..   .+.. +          -++.   ...
T Consensus       248 i~vg~~q~fg~p~g~GGP~aG~~a~~~~------l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~q  321 (939)
T TIGR00461       248 IVLGSSQRFGVPMGYGGPHAAFFAVKDE------YNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQ  321 (939)
T ss_pred             EEeeCCCccCCCCCCCCCceeeeeecHh------hHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHH
Confidence            9988877763     5888899999884      222210         00   0000 0          1121   122


Q ss_pred             HHHHHHHH--HHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEc
Q 009673          356 TIGGLAVC--LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN  433 (529)
Q Consensus       356 ~iaala~a--l~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~  433 (529)
                      .+.|+.++  +..+...++++..+++..++.+|.+.|.+.|+++..+ .--..+.+++.  ..+.+++.+.|.+.||.++
T Consensus       322 aL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~-~fF~~~~v~~~--~~~~~~i~~~~~~~gi~l~  398 (939)
T TIGR00461       322 VLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHELINK-TWFDTLTVKVG--NGISSELLKAAEEFNINLR  398 (939)
T ss_pred             HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-CccceEEEEeC--CCCHHHHHHHHHHCCCeee
Confidence            33333333  3445556778889999999999999999999998764 11112344442  1346778888999999975


Q ss_pred             CCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673          434 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH  474 (529)
Q Consensus       434 ~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~  474 (529)
                      ..         ..+.+++++...+|    ++|++.+++.+.
T Consensus       399 ~~---------~~~~i~~s~~E~~t----~~di~~l~~~~~  426 (939)
T TIGR00461       399 AV---------DTTTVGIALDETTT----KADVENLLKVFD  426 (939)
T ss_pred             ec---------CCCEEEEEeecCCC----HHHHHHHHHHhc
Confidence            41         23579999887765    799999999995

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=99.33  E-value=1.5e-09  Score=115.11  Aligned_cols=326  Identities=14%  Similarity=0.068  Sum_probs=166.2

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHHHHhh-c-
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAI-L-  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs~A~~~~l~al-l-  189 (529)
                      .-.|+|.+|+...+......++.    ...++  .. .+++ +++.+++.-. .+   .....+|||+|+..++... . 
T Consensus        49 h~~p~v~~a~~~ql~~~~~~~~~----~~~~~--~~-~~la-~~l~~~~p~~~~~---~v~f~~sGseA~e~AlklAr~~  117 (420)
T TIGR00700        49 HSHPRVVDAVRTQVAEFTHTCFM----VTPYE--GY-VALA-EKLNRIAPGSGPK---KSVFFNSGAEAVENAVKIARSY  117 (420)
T ss_pred             CCCHHHHHHHHHHHHhccCcccc----ccCCh--HH-HHHH-HHHHHhCCCCCCC---EEEEeCCcHHHHHHHHHHHHHh
Confidence            44788999988777532111110    01111  12 2233 5566665321 12   2355689999999887633 2 


Q ss_pred             CCCCEEEEcCCCCCccccccccc-------cccccc--cccceEEEEEcccCCCC--------CCCCHHHHHHHhh----
Q 009673          190 KPHDRIMGLDLPHGGHLSHGFMT-------PKRRVS--GTSIYFESMPYRLDEST--------GLVDYDMLEKTAI----  248 (529)
Q Consensus       190 ~pGD~Vl~~~~~~~g~~s~g~~~-------~~~~i~--~~g~~~~~v~~~v~~~~--------~~iD~d~le~~i~----  248 (529)
                      ....+|+...-.|-|.- .+...       ......  ..+  +..++++.....        ..-+++.+++.+.    
T Consensus       118 tgr~~ii~~~~~yHG~t-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (420)
T TIGR00700       118 TGRPGVVAFDHGFHGRT-NMTMALTAKVMPYKSGFGPFAPE--VYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVG  194 (420)
T ss_pred             cCCCcEEEECCCcCCCc-HHHHHhcCCCcccccCCCCCCCC--cEEeCCCccccccccccchhHHHHHHHHHHHHHhhcC
Confidence            22346777665432221 00000       000000  001  111222210000        0012456666653    


Q ss_pred             hcCCcEEEEcCC--CCCC----CCCHHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEecccccc-cC
Q 009673          249 LFRPKLIIAGAS--AYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RG  318 (529)
Q Consensus       249 ~~~pklIi~~~s--~~p~----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l-~G  318 (529)
                      ..+..+||+..-  +.+.    ...+++|+++|++||+++|+|+++ .|+...+...  .... ..|+++  ++|.+ +|
T Consensus       195 ~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~-tg~gr~g~~~a~~~~~~~pDi~~--lsK~l~~G  271 (420)
T TIGR00700       195 ANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQ-TGFARTGAMFACEHEGPEPDLIT--TAKSLADG  271 (420)
T ss_pred             CCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecc-cCCcccchhHHHhhcCCCCCEEE--eeccccCC
Confidence            124456776521  1111    223899999999999999999984 4553333110  0111 357765  67998 57


Q ss_pred             CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cC
Q 009673          319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LG  394 (529)
Q Consensus       319 prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G  394 (529)
                      ++.|++++++      ++.+.+.......+.++......+++ ++++.+....+.   +++.+..+.+.+.|++    .+
T Consensus       272 ~pig~v~~~~------~i~~~~~~~~~~~T~~~~pl~~aaa~-a~l~~l~~~~~~---~~~~~~g~~l~~~L~~l~~~~~  341 (420)
T TIGR00700       272 LPLSGVTGRA------EIMDAPAPGGLGGTYAGNPLACAAAL-AVLAIIESEGLI---ERARQIGRLVTDRLTTLKAVDP  341 (420)
T ss_pred             cceEEEEecH------HHHhhcCCCCcCCCCCcCHHHHHHHH-HHHHHHHhccHH---HHHHHHHHHHHHHHHHHHhhCC
Confidence            8889999987      67776654333333444444444443 356655444443   3344444445555544    22


Q ss_pred             -cEEecCCCCCceEEEccCCC--CC-c---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673          395 -YKLVSGGSDNHLVLVDLRPM--GI-D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV  467 (529)
Q Consensus       395 -~~v~~~gt~~~~~~v~~~~~--~i-~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~  467 (529)
                       +..+.+ . ..+.++.+...  .. +   ...+.+.+.+.||.+    .|+..  + ...|||+.+..    +++++++
T Consensus       342 ~~~~vrg-~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i----~p~~~--f-~~~lRl~p~l~----~~~~~l~  408 (420)
T TIGR00700       342 RIGDVRG-L-GAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLL----LTCGM--F-GNIIRFLPPLT----IGDELLS  408 (420)
T ss_pred             CEEEeec-c-ceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEE----eccCC--C-CCEEEEECCCC----cCHHHHH
Confidence             222222 2 23444444211  01 1   233555567899998    34321  1 36899986532    4589999


Q ss_pred             HHHHHHHHHHH
Q 009673          468 AIADFIHEGVE  478 (529)
Q Consensus       468 ~la~~i~~~~~  478 (529)
                      +.++.|.+++.
T Consensus       409 ~~~~~l~~~l~  419 (420)
T TIGR00700       409 EGLDILCAILA  419 (420)
T ss_pred             HHHHHHHHHhh
Confidence            99999988763

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]

Probab=99.32  E-value=1.7e-10  Score=117.49  Aligned_cols=269  Identities=15%  Similarity=0.218  Sum_probs=176.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh---cCC--C---CEEEEcCCCCCcccccccccccccc
Q 009673          146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---LKP--H---DRIMGLDLPHGGHLSHGFMTPKRRV  217 (529)
Q Consensus       146 ~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al---l~p--G---D~Vl~~~~~~~g~~s~g~~~~~~~i  217 (529)
                      ..++|..+.+.++.+|+.+.+..+.  ..+.||++..++....   ...  |   -.++++...|.+.        .+..
T Consensus       118 ~~~~e~~~Vnm~~~L~~~~~~~~g~--~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~--------eK~a  187 (491)
T KOG1383|consen  118 VRKLEAECVNMIANLFNAPSDSCGC--GTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAF--------EKAA  187 (491)
T ss_pred             hHHHHHHHHHHHHHHhcCCccccCc--cccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHH--------HHHH
Confidence            4588999999999999999775543  2344457755444332   111  1   1233333222111        1112


Q ss_pred             ccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHH-hCCEEEEeccccccccc
Q 009673          218 SGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADA-VGALLMMDMAHISGLVA  294 (529)
Q Consensus       218 ~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~-~g~~livD~ah~~Gli~  294 (529)
                      ...+.  +...+++++.++.+|+.++.+.+.+ ++.+++...++.|.  ..|+++|.+++-+ +++++++|++- -|++.
T Consensus       188 ~yf~v--~l~~V~~~~~~~~~D~~k~~~~i~e-Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~-GgFi~  263 (491)
T KOG1383|consen  188 RYFEV--ELREVPLDEGDYRVDPGKVVRMIDE-NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACL-GGFIN  263 (491)
T ss_pred             hhEEE--EEEeeeccccceEecHHHHHHHhcc-ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccC-ccccc
Confidence            22233  4456667777899999999999998 88888888787775  7789999999988 99999999873 34443


Q ss_pred             c-cccC-CCCC----cccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh--cccc------cCCCCCCChHHHHHH
Q 009673          295 A-SVVA-DPFK----YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI--NNAV------FPGLQGGPHNHTIGG  359 (529)
Q Consensus       295 ~-~~~~-~~~~----~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i--~~~~------~p~~~g~p~~~~iaa  359 (529)
                      . +... .+++    +..-++.++||.-..|.| |+++.+.+.    .+...+  ....      .|.+-|+-...++++
T Consensus       264 p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~----~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~  339 (491)
T KOG1383|consen  264 PAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKE----LLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAA  339 (491)
T ss_pred             cccccCccccccCCCCceeEeeccceeeeeecCcEEEEEcccc----cccceEEEeccccCccccCcccccCCcccHHHH
Confidence            2 2221 2332    556788899998556777 888887752    111111  1111      222333334456777


Q ss_pred             HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCC
Q 009673          360 LAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKN  435 (529)
Q Consensus       360 la~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~  435 (529)
                      .+++|-.+..++|.+..+++.++++.|.+.+++ .++.++..   .-..++.+.....+-.++...|.+.|..++.-
T Consensus       340 ~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk---p~vs~~~~~s~~~~i~elsd~l~~~GW~lnal  413 (491)
T KOG1383|consen  340 QWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGK---PLVSFILFGSNDVNIFELSDLLRKKGWILNAL  413 (491)
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCC---CcEEEEEccCCccchhhhhHHHHhcCcCcccc
Confidence            777777777788999999999999999999998 67888764   22233334444456677889999999988653

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.32  E-value=3.5e-09  Score=112.32  Aligned_cols=320  Identities=13%  Similarity=0.118  Sum_probs=167.6

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCC
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP  191 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~p  191 (529)
                      .-.|.|.+|+...+.+....+      + .++  ..+| + .+++.++++...+.   ....+||++|+..++... .-.
T Consensus        69 h~~p~v~~ai~~q~~~~~~~~------~-~~~--~~~~-l-a~~L~~~~~~~~~~---v~f~~SGsEA~e~AiklAr~~t  134 (433)
T PRK00615         69 HSHPKICDAIQQGAERGTSYG------L-TSE--QEIL-F-AEELFSYLGLEDHK---IRFVSSGTEATMTAVRLARGIT  134 (433)
T ss_pred             CCCHHHHHHHHHHHHhCCCCC------C-CCH--HHHH-H-HHHHHHhCCCCcCE---EEEeCchHHHHHHHHHHHHHhh
Confidence            357899999887775422111      1 112  1222 2 36677777543221   245689999999888643 223


Q ss_pred             C-CEEEEcCCCCCccccccccccccccccccceEEE--EEc---ccCCCC---CCCCHHHHHHHhhhc--CCcEEEEcC-
Q 009673          192 H-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES--MPY---RLDEST---GLVDYDMLEKTAILF--RPKLIIAGA-  259 (529)
Q Consensus       192 G-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~--v~~---~v~~~~---~~iD~d~le~~i~~~--~pklIi~~~-  259 (529)
                      | .+|+...-.|-|+-. +. .  ..++..+.....  ..+   +..+..   ..-|++++++.+..+  +..+||+.. 
T Consensus       135 gr~~ii~~~~~yHG~td-~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv  210 (433)
T PRK00615        135 GRSIIIKFLGCYHGHAD-TL-L--QGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPI  210 (433)
T ss_pred             CCCEEEEEcCccCCCCc-cc-C--cccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCC
Confidence            4 467766644322210 00 0  011111100000  000   000000   123788898888643  345666652 


Q ss_pred             -CCCCCCCC----HHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEEEeccccccc-CCCCeEEEeeCCC
Q 009673          260 -SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDP  330 (529)
Q Consensus       260 -s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv~~S~hK~l~-GprgG~i~~~~~~  330 (529)
                       ++.+...+    +++|+++|++||+++|+|++| .|+ -.+..  ..-+. ..|+++  +.|.++ |..+|++++++  
T Consensus       211 ~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~-tG~-R~G~~ga~~~~gv~PDi~~--~gK~lggG~p~~av~~~~--  284 (433)
T PRK00615        211 CANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVV-TGF-RVAQGGAAAIYHVKPDITV--YGKILGGGLPAAAVVAHK--  284 (433)
T ss_pred             CCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccc-ccc-cccHhHHHHhcCCCCCeEE--EcccccCCcceeeeeecH--
Confidence             22222333    679999999999999999998 465 12210  01111 368876  579996 45678999988  


Q ss_pred             cchhHHHhhhccc--ccC-CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cCcEEecCCCC
Q 009673          331 VLGVELESAINNA--VFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLVSGGSD  403 (529)
Q Consensus       331 ~~~~~l~~~i~~~--~~p-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~~v~~~gt~  403 (529)
                          ++.+.+...  .+. ++.++ +...+++..++|+.+.+..   ..+++.++.++|.+.|++    .|+++...+ .
T Consensus       285 ----~i~~~~~~~~~~~~~~T~~g-~p~~~aa~la~L~~i~~~~---~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~  355 (433)
T PRK00615        285 ----SIMDHLAPEGTIFQAGTLSG-NPLAMAAGKASINLCREQG---FYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-Y  355 (433)
T ss_pred             ----HHHhhhcCCCCcccCCCCcc-cHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-e
Confidence                676665421  111 22233 3333444444677665433   355666666667555544    466532211 1


Q ss_pred             CceEEEccCCCC---C------c---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673          404 NHLVLVDLRPMG---I------D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD  471 (529)
Q Consensus       404 ~~~~~v~~~~~~---i------~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~  471 (529)
                      .-+.-+.+....   +      +   ...+.+.|.++||.+.....|       ...+        +..++++|++++++
T Consensus       356 G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~-------~~~l--------s~~ht~~did~~~~  420 (433)
T PRK00615        356 GSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPFE-------ASFL--------SSAHSMENLDYAQN  420 (433)
T ss_pred             ceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCcccc-------ccce--------ecCCCHHHHHHHHH
Confidence            122222232110   0      1   124667777899998532111       1112        22367999999999


Q ss_pred             HHHHHHHHH
Q 009673          472 FIHEGVEIT  480 (529)
Q Consensus       472 ~i~~~~~~~  480 (529)
                      ++.+++.+.
T Consensus       421 a~~~~~~~~  429 (433)
T PRK00615        421 VLIDSLEKV  429 (433)
T ss_pred             HHHHHHHHH
Confidence            999998764

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=99.31  E-value=2.6e-10  Score=112.41  Aligned_cols=308  Identities=18%  Similarity=0.196  Sum_probs=185.8

Q ss_pred             HHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCC--CCccccccccccccccccccceEEEEEcccC
Q 009673          155 KRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP--HGGHLSHGFMTPKRRVSGTSIYFESMPYRLD  232 (529)
Q Consensus       155 ~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~--~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~  232 (529)
                      +..++.||.+.     .+-.+-|-.|-...+..++++|+.+......  ...|+...    +..+...|.  .++.+.++
T Consensus        86 ~avkdifGfq~-----~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTT----r~h~~~ng~--~~~n~~~~  154 (471)
T COG3033          86 DAVKDIFGFQY-----TIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTT----RGHIQINGA--TPRNVYVD  154 (471)
T ss_pred             HHHHHhcCcee-----eeeccCCccHHHHHHHHHhhhccccCCccccccccceecch----hHHHHhcCC--cccccccc
Confidence            55678899765     2334556667776777777777665441111  12222211    112222333  22222222


Q ss_pred             C---------CCCCCCHHHHHHHhhhcC---CcEEEEcCCCCC---C---CCCHHHHHHHHHHhCCEEEEeccccccccc
Q 009673          233 E---------STGLVDYDMLEKTAILFR---PKLIIAGASAYP---R---DFDYPRMRQIADAVGALLMMDMAHISGLVA  294 (529)
Q Consensus       233 ~---------~~~~iD~d~le~~i~~~~---pklIi~~~s~~p---~---~~d~~~i~~ia~~~g~~livD~ah~~Gli~  294 (529)
                      +         =.|.+|++.|++.|++..   .-.|++.-++|+   .   ..+++++.+||++|+++++.|++..+.-.+
T Consensus       155 ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaY  234 (471)
T COG3033         155 EAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAY  234 (471)
T ss_pred             ccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhh
Confidence            1         136899999999998743   345555433333   2   457899999999999999999875433211


Q ss_pred             c------cccCCC--------CCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhc-----ccccCCCCCCChHH
Q 009673          295 A------SVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAIN-----NAVFPGLQGGPHNH  355 (529)
Q Consensus       295 ~------~~~~~~--------~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~-----~~~~p~~~g~p~~~  355 (529)
                      .      +.....        +.|+|-++.|.-|--..+-||++..+++-  ..++....+     .--+|. .|+..--
T Consensus       235 FIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmGGfl~~~D~~--~fDvy~~~~~~~V~~eG~~t-YGgl~Gr  311 (471)
T COG3033         235 FIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMGGFLCFKDDS--FFDVYEECRTLVVVQEGFPT-YGGLAGR  311 (471)
T ss_pred             hhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccccEEEecCcc--HHHHHHHHHhheEeeccccc-cCcccch
Confidence            1      111122        23799999999996446788999999851  012222221     112332 3444455


Q ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCC-------CCCcHHHH-HHhHhc
Q 009673          356 TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP-------MGIDGARV-EKILDM  427 (529)
Q Consensus       356 ~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~-------~~i~~~~~-~~~L~~  427 (529)
                      .+.++|+.|.+....   .|.++.++..++|.+.|.+.|++++.+. ..|-+++|...       ....++.+ .++..+
T Consensus       312 dmealAvGL~e~~~~---~yl~~Rv~Qv~YL~~~l~~~GVpi~~pa-GGHavfvda~~~lphip~eqFpaqala~ely~e  387 (471)
T COG3033         312 DMEALAVGLREGVNF---DYLAHRVAQVQYLADGLEEAGVPIVQPA-GGHAVFVDAGKFLPHIPAEQFPAQALACELYKE  387 (471)
T ss_pred             hHHHHHHHHHHhcCc---HHHHHHHHHHHHHHHHHHhcCCeeEecC-CCceEEeehhhhcCCCChhhCcHHHHHHHHHHH
Confidence            788888889877654   4566667778999999999999887652 35888887531       11223433 455578


Q ss_pred             CCeEEcC-CC--CCCCC--C---CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 009673          428 ASITLNK-NS--VPGDK--S---ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEA  483 (529)
Q Consensus       428 ~GI~v~~-~~--~Pg~~--~---~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~~  483 (529)
                      .||...- +.  .+.+.  +   +-...-+|+.+|-   +-.+.+.|+.+++.++++.++..++
T Consensus       388 ~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipR---rtYt~~HmD~V~~a~~~l~e~~~~i  448 (471)
T COG3033         388 AGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPR---RTYTQTHMDFVIEAFKALKENAEDI  448 (471)
T ss_pred             hCeeeeeeeceecccCCCccccCCCchheeeEeccc---cccchhHHHHHHHHHHHHHhccccC
Confidence            9997642 21  12221  1   1112469998764   4478999999999999988876443

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=99.29  E-value=4.5e-09  Score=111.63  Aligned_cols=332  Identities=15%  Similarity=0.114  Sum_probs=167.9

Q ss_pred             CCcHHHHHHHhhhhhc-cCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC--CCCCceeeecCChHHHHHHHHHhh-
Q 009673          113 FTSRAVMEAVGSCLTN-KYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGSPANFEVYTAI-  188 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~-~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~--~~~~~~~V~~~sGs~A~~~~l~al-  188 (529)
                      .-+|.|.+|+...+.. .+..+.    .+. ++   ...+++ +++.+.+..+  .+. .+.+..+||++|+..++... 
T Consensus        55 h~~p~v~~ai~~ql~~~~~~~~~----~~~-~~---~~~~la-e~l~~~~~~~~~~~~-~~~f~~~sGseA~e~AlklAr  124 (425)
T PRK09264         55 HNNPVLKQALIDYLQRDGITHGL----DMH-TT---AKREFL-ETFEETILKPRGLDY-KVQFTGPTGTNAVEAALKLAR  124 (425)
T ss_pred             CCCHHHHHHHHHHHHhccccccc----ccC-cH---HHHHHH-HHHHHhhcCCcCCCc-eEEEeCCCHHHHHHHHHHHHH
Confidence            3478888888877653 121111    011 11   112222 5555554222  110 02222369999999887643 


Q ss_pred             cCCC-CEEEEcCCCCCcc-ccc----cccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCcEEEE
Q 009673          189 LKPH-DRIMGLDLPHGGH-LSH----GFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIA  257 (529)
Q Consensus       189 l~pG-D~Vl~~~~~~~g~-~s~----g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-----~pklIi~  257 (529)
                      .-+| .+|+...-.|-|. ...    +....+.........+..++++.......-|++++++.+...     ++.+||+
T Consensus       125 ~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~  204 (425)
T PRK09264        125 KVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIV  204 (425)
T ss_pred             HhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEE
Confidence            2233 5677776543222 100    000000000000001122333210000013678888888642     2456666


Q ss_pred             cC--CCCCC----CCCHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEeccccccc--CCCCeEEEe
Q 009673          258 GA--SAYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR--GPRGGMIFF  326 (529)
Q Consensus       258 ~~--s~~p~----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~--GprgG~i~~  326 (529)
                      ..  .+.+.    ...+++|+++|++||+++|+|++|. |+.-.|.. . .... ..|++++  .|.++  |.+.|++++
T Consensus       205 Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~~~~~~~v~PDi~t~--~K~l~~~G~pigav~~  281 (425)
T PRK09264        205 ETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQA-GCGRTGTFFSFERAGITPDIVTL--SKSISGYGLPMALVLI  281 (425)
T ss_pred             ecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhh-CCccccHHHHHhhcCCCCCEEEe--ccccCCCccceEEEEE
Confidence            52  22221    2358999999999999999999975 43211110 0 0011 3577765  59984  455689998


Q ss_pred             eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEE-ec--CC
Q 009673          327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKL-VS--GG  401 (529)
Q Consensus       327 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v-~~--~g  401 (529)
                      ++      ++. .+.........++... ..++..++++++...  .++.+++.++.++|.+.|++.  .+.. ..  .+
T Consensus       282 ~~------~i~-~~~~~~~~~T~~gnp~-~~aaa~a~l~~~~~~--~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg  351 (425)
T PRK09264        282 KP------ELD-VWKPGEHNGTFRGNNL-AFVTATAALEEYWSD--DAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRG  351 (425)
T ss_pred             ch------hhh-ccCCCccCCCCCCCHH-HHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHHHhCCCceeccee
Confidence            87      442 3322222222333222 333332355332211  245666777777777777552  2221 11  11


Q ss_pred             CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          402 SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       402 t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                       ...+.++.+... .....+.+.|.+.||.+...    .   .....||++.+..    ++++|++++++.|.+++...
T Consensus       352 -~Gl~~~i~l~~~-~~~~~l~~~~~~~Gv~~~~~----~---~~~~~lr~~p~l~----~t~~ei~~~~~~l~~~l~~~  417 (425)
T PRK09264        352 -RGMMQGIDFGDG-ELAGKIAAEAFENGLIIETS----G---PEDEVVKLLPPLT----IDEEELEEGLDILEEAVAEV  417 (425)
T ss_pred             -cccEEEEEecCh-HHHHHHHHHHHHCCCEEecc----C---CCCCEEEEeCCCC----CCHHHHHHHHHHHHHHHHHH
Confidence             223445555421 12346777788899998431    1   1236799975533    55899999999999998754

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=99.29  E-value=4.8e-09  Score=109.60  Aligned_cols=328  Identities=19%  Similarity=0.106  Sum_probs=174.9

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHHHHhh--cC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAI--LK  190 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs~A~~~~l~al--l~  190 (529)
                      -+|.|++|+...+..-.   ....++......++    . .+++.+.+-.+ .+   .....+||++||.+++...  ..
T Consensus        73 ~hP~Vv~Av~~q~~~~~---h~~~~~~~~e~~v~----~-ae~L~~~~p~~~~~---~~~f~~sGaeA~E~AiKiAr~~T  141 (447)
T COG0160          73 NHPRVVEAVKRQLAKLN---HTHTRDLYYEPYVE----L-AEKLTALAPGSGLK---KVFFGNSGAEAVEAAIKIARAYT  141 (447)
T ss_pred             CCHHHHHHHHHHHHHhh---cccCCcccchhHHH----H-HHHHHHhCCcccCC---eEEecCCcHHHHHHHHHHHHHHh
Confidence            47999999987664221   11112221111122    2 24555655542 22   3456789999999988643  22


Q ss_pred             CCCEEEEcCCCCCcccccccc--ccccccc-----cccceEEEEEcccCCCC-CC--------CCHHHHHHHhhh-----
Q 009673          191 PHDRIMGLDLPHGGHLSHGFM--TPKRRVS-----GTSIYFESMPYRLDEST-GL--------VDYDMLEKTAIL-----  249 (529)
Q Consensus       191 pGD~Vl~~~~~~~g~~s~g~~--~~~~~i~-----~~g~~~~~v~~~v~~~~-~~--------iD~d~le~~i~~-----  249 (529)
                      -...|+..+-.|-|. |++..  +..+...     -....+..++||..... +.        -..+.++..+..     
T Consensus       142 gr~~viaf~~afHG~-T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~  220 (447)
T COG0160         142 GRPGVIAFDGAFHGR-TLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGP  220 (447)
T ss_pred             CCCcEEEECCccccc-chhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCC
Confidence            345677766553222 11100  0000000     00011233444421111 11        123345554432     


Q ss_pred             cCCcEEEEcCC-CCCC-C----CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC----cccEEEeccccccc-C
Q 009673          250 FRPKLIIAGAS-AYPR-D----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSLR-G  318 (529)
Q Consensus       250 ~~pklIi~~~s-~~p~-~----~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~----~aDiv~~S~hK~l~-G  318 (529)
                      .++.+||+..- ..++ .    .-+++++++|++||+++|+|+.|. |+--.|. -..++    ..|+++++  |.+. |
T Consensus       221 ~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQt-G~GRTG~-~fa~E~~gv~PDivt~a--K~ig~G  296 (447)
T COG0160         221 EEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQT-GFGRTGK-MFAFEHFGVEPDIVTLA--KSLGGG  296 (447)
T ss_pred             CceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcccc-chhhhhcCCCCCEEEec--ccccCC
Confidence            23567777521 1222 1    237899999999999999999974 4322221 11122    36899876  9984 4


Q ss_pred             CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cCcE
Q 009673          319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYK  396 (529)
Q Consensus       319 prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G~~  396 (529)
                      ...|.+++++      ++.+ .......++.++......+|++ .|+.+..+   ...++..+.-++|.+.|.+  ..++
T Consensus       297 ~Pl~avv~r~------ei~~-~~~g~~~~Tf~GNpva~Aaa~A-vL~vie~e---~L~~~a~~~G~~l~~~L~~l~~~~~  365 (447)
T COG0160         297 LPLSAVVGRA------EIMD-WPPGGHGGTFGGNPVACAAALA-VLDVIEEE---NLLERAAELGEYLRDRLEELQEKHP  365 (447)
T ss_pred             CceeEEeccH------Hhcc-cCCcccCCCCCcCHHHHHHHHH-HHHHHHHc---cHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            5568888887      5555 3333344445564444444444 56655433   4566666677778887765  2344


Q ss_pred             EecCCC-CCceEEEccCCC----CCc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHH
Q 009673          397 LVSGGS-DNHLVLVDLRPM----GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVA  468 (529)
Q Consensus       397 v~~~gt-~~~~~~v~~~~~----~i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~  468 (529)
                      ++.+-. ..-+.-+.+...    .-+   .+.+...+.+.|+.+..+   |    ...+.|||--| +|   ++++++++
T Consensus       366 ~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~---G----~~~nviRi~PP-L~---is~e~~d~  434 (447)
T COG0160         366 LIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTC---G----PHGNVLRILPP-LT---ISDEELDE  434 (447)
T ss_pred             ceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEecc---C----CCCcEEEEeCC-cc---cCHHHHHH
Confidence            444311 112232333211    112   244667777899877432   1    12467999754 55   77999999


Q ss_pred             HHHHHHHHHHH
Q 009673          469 IADFIHEGVEI  479 (529)
Q Consensus       469 la~~i~~~~~~  479 (529)
                      ..++|.+++..
T Consensus       435 ~l~il~~al~~  445 (447)
T COG0160         435 GLDILEEALKE  445 (447)
T ss_pred             HHHHHHHHHHh
Confidence            99999998864

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=99.28  E-value=2.6e-09  Score=113.87  Aligned_cols=323  Identities=15%  Similarity=0.091  Sum_probs=167.6

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCCC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH  192 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~pG  192 (529)
                      -.|.|.+|+...+.. +..  ....++ .++...    ...+++.+++.....+  .....+||++|+..++... .-.|
T Consensus        59 ~~p~v~~Ai~~ql~~-~~~--~~~~~~-~~~~~~----~lae~L~~~~p~~~~~--~v~f~~SGseA~e~AiklAr~~tg  128 (445)
T PRK08593         59 APPRVVEAIKAQADK-FIH--YTPAYM-YHEPLV----RLAKKLCELAPGDFEK--RVTFGLSGSDANDGIIKFARAYTG  128 (445)
T ss_pred             CCHHHHHHHHHHHHh-ccC--cccccc-CCHHHH----HHHHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHhhC
Confidence            478888888877643 211  110111 122222    2336677776432101  1244589999999888742 1123


Q ss_pred             -CEEEEcCCCCCcccccccccccccccccc-------------ceEEEEEcccCCC--CCCCC-------HHHHHHHhhh
Q 009673          193 -DRIMGLDLPHGGHLSHGFMTPKRRVSGTS-------------IYFESMPYRLDES--TGLVD-------YDMLEKTAIL  249 (529)
Q Consensus       193 -D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g-------------~~~~~v~~~v~~~--~~~iD-------~d~le~~i~~  249 (529)
                       .+|+..+-.|-|.. .+      .++..+             ..+..++++-...  ....+       ++++++.+..
T Consensus       129 r~~ii~~~~~YHG~t-~~------als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (445)
T PRK08593        129 RPYIISFTNAYHGST-YG------SLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEK  201 (445)
T ss_pred             CCeEEEECCCcCCCc-HH------HHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHh
Confidence             46777665432221 01      011111             0012223221000  00111       2445444432


Q ss_pred             ----cCCcEEEEcCC-CCCC-CCC----HHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEEEecccccc
Q 009673          250 ----FRPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSL  316 (529)
Q Consensus       250 ----~~pklIi~~~s-~~p~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv~~S~hK~l  316 (529)
                          .+..+||+... ..++ ..+    +++|+++|++||+++|+|++|. |+-..|..  ..-+. ..|+++  +.|.+
T Consensus       202 ~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~t-g~GrtG~~~a~~~~gv~pDi~t--~gK~l  278 (445)
T PRK08593        202 YLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQ-GLGRTGKWSSISHFNITPDLMS--FGKSL  278 (445)
T ss_pred             hcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCchHHHHHhcCCCCCEee--ecccc
Confidence                24567777632 1222 333    8999999999999999999963 33112211  00011 257775  56998


Q ss_pred             c-CCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--
Q 009673          317 R-GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--  393 (529)
Q Consensus       317 ~-GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--  393 (529)
                      + |.++|++++++      ++.+.++.....++.+++.. ..++..++++.+.++   +..+++.++.++|.+.|++.  
T Consensus       279 ~~G~p~gav~~~~------~i~~~~~~~~~~~T~~~~pl-~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~  348 (445)
T PRK08593        279 AGGMPMSAIVGRK------EIMESLEAPAHLFTTGANPV-SCAAALATIDMIEDE---SLLQRSAEKGEYARKRFDQWVS  348 (445)
T ss_pred             cCCcccEEEEEcH------HHHhhhccCCCCCCCCCCHH-HHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHh
Confidence            5 56789999987      67766643222223334333 344434467665433   34566667777777777652  


Q ss_pred             CcEEecC--CCCCceEEEccCCC---CC-c---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHH
Q 009673          394 GYKLVSG--GSDNHLVLVDLRPM---GI-D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK  464 (529)
Q Consensus       394 G~~v~~~--gt~~~~~~v~~~~~---~i-~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~  464 (529)
                      .+.++..  |. ..+.-+.+...   .. +   ...+...|.+.||.+...         ....+|+..+..    ++++
T Consensus       349 ~~~~v~~vrG~-Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~---------~~~~lr~~p~l~----~t~~  414 (445)
T PRK08593        349 KYNFVGDVRGY-GLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAV---------AGNVLRFQPPLV----ITYE  414 (445)
T ss_pred             cCCcEEEEecc-ceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEecc---------CCCEEEEECCCc----cCHH
Confidence            2222221  11 11222222110   00 1   234667777899998421         135799976543    6799


Q ss_pred             HHHHHHHHHHHHHHHH
Q 009673          465 EFVAIADFIHEGVEIT  480 (529)
Q Consensus       465 d~~~la~~i~~~~~~~  480 (529)
                      |++++.+.+.+++...
T Consensus       415 ~id~~~~~l~~~l~~~  430 (445)
T PRK08593        415 QLDTALNTIEQAFTAL  430 (445)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999998754

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=99.28  E-value=7.8e-10  Score=114.85  Aligned_cols=278  Identities=18%  Similarity=0.169  Sum_probs=139.6

Q ss_pred             HHHHHHHHcCCCCCCCceeeecCChH----HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEE
Q 009673          153 CQKRALAAFNLDENKWGVNVQPLSGS----PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP  228 (529)
Q Consensus       153 a~~~la~~~g~~~~~~~~~V~~~sGs----~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~  228 (529)
                      -+..+++++|.+.    +|.....|+    +|..+++..--+..++|+++.-.|+.+.. ...     ....+..++++.
T Consensus       115 ~Qs~i~eLTGmdv----aNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~-v~~-----t~a~~~g~~iv~  184 (429)
T PF02347_consen  115 YQSMICELTGMDV----ANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRA-VLR-----TYAAPLGIEIVE  184 (429)
T ss_dssp             HHHHHHHHHTSSE----E-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHH-HHH-----HHCCHCCEEEEE
T ss_pred             HHHHHHHhhCCCc----cCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHH-HHH-----HhhhhCCeEEEE
Confidence            3588999999996    344444443    33333333333445699999877655432 000     112234467888


Q ss_pred             cccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-ccc
Q 009673          229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD  306 (529)
Q Consensus       229 ~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aD  306 (529)
                      ++.+ +++..|        .+ ++..|++.+||+-+ ..|+++|.++++++|+++++ .+.   ....+....|-+ ++|
T Consensus       185 ~~~~-~~~~~d--------~~-~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~-~ad---~~aL~~l~~Pge~GAD  250 (429)
T PF02347_consen  185 VPLD-EDGTTD--------DD-DTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIV-GAD---PNALGGLKSPGEYGAD  250 (429)
T ss_dssp             E-BB-TTCSB---------ST-TEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEE-CGG---CCGCCTC--GGGGT-S
T ss_pred             eccc-ccCCcc--------cc-CeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEE-ecC---HHHHhCcCChhhcCcc
Confidence            7776 345555        33 78889999888766 66899999999999999887 442   233333344544 899


Q ss_pred             EEEecccccc------cCCCCeEEEeeCCCc----------------------chhHHHhhhccc-ccCCCCCCChHHHH
Q 009673          307 VVTTTTHKSL------RGPRGGMIFFKKDPV----------------------LGVELESAINNA-VFPGLQGGPHNHTI  357 (529)
Q Consensus       307 iv~~S~hK~l------~GprgG~i~~~~~~~----------------------~~~~l~~~i~~~-~~p~~~g~p~~~~i  357 (529)
                      |++++ ||+|      +||..|++.+++...                      .+..-.+.|++- ....+ ++  +..+
T Consensus       251 I~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNI-ct--nqaL  326 (429)
T PF02347_consen  251 IVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNI-CT--NQAL  326 (429)
T ss_dssp             EEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT----S--S-HH
T ss_pred             EEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhh-hh--hHHH
Confidence            99776 8876      567779999988410                      000001112111 11111 11  1122


Q ss_pred             HHHHH--HHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCC
Q 009673          358 GGLAV--CLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKN  435 (529)
Q Consensus       358 aala~--al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~  435 (529)
                      .|+.+  -+..+..+++++..+++..++.++++.|.+. +.+...+..-+-.++.... .....++.+.....|+...  
T Consensus       327 ~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~-~~~~~~~~~f~e~v~~~~~-~~~~~~l~~~~~~~gl~~~--  402 (429)
T PF02347_consen  327 LALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI-YGLPFDNPFFFEFVVVFSK-DKEVEELLKRGIEGGLNLR--  402 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT-TBECSSSSSBSSEEEEESS--HHHHHHHHTT----EEEG--
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh-cCcccCCCCceeeeeecCC-cHHHHHHHHHHHhcCCCcc--
Confidence            22221  2334445678999999999999999999885 2222221111112222221 1112224444444564432  


Q ss_pred             CCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673          436 SVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI  473 (529)
Q Consensus       436 ~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i  473 (529)
                       .|      ..+.+-|+....+    +++|++.+++++
T Consensus       403 -~~------~~~~~li~~TE~~----t~edid~lv~~f  429 (429)
T PF02347_consen  403 -YP------DDGALLICVTETR----TKEDIDRLVEAF  429 (429)
T ss_dssp             -GG-------SSEEEEE--TT------HHHHHHHHH--
T ss_pred             -cc------CCCeEEEEccCCC----CHHHHHHHHhcC
Confidence             12      2346777765544    579999998864

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>PRK06105 aminotransferase; Provisional

Probab=99.27  E-value=5.1e-09  Score=112.08  Aligned_cols=323  Identities=14%  Similarity=0.099  Sum_probs=171.3

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---  189 (529)
                      .-+|+|.+|+...+.+ +.......++.  ++    .+..+.+++.+++..+.+   ......||++|+.+++....   
T Consensus        64 h~~p~i~~Ai~~q~~~-~~~~~~~~~~~--~~----~~~~lae~L~~~~p~~~~---~v~f~~SGseAve~AlKlar~~~  133 (460)
T PRK06105         64 FSEQRLVEAAARQMKK-LPFYHTFSHKS--HG----PVIDLAEKLVAMAPVPMS---KVFFTNSGSEANDTVVKLVWYYN  133 (460)
T ss_pred             CCCHHHHHHHHHHHHh-CCCeecccccC--CH----HHHHHHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence            3578999999887753 22111111111  11    111233677777754322   22446899999998887531   


Q ss_pred             ----CCC-CEEEEcCCCC-Cccccccccccccccccccc------------eEEEEEcccCCC---CC-------CCCHH
Q 009673          190 ----KPH-DRIMGLDLPH-GGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES---TG-------LVDYD  241 (529)
Q Consensus       190 ----~pG-D~Vl~~~~~~-~g~~s~g~~~~~~~i~~~g~------------~~~~v~~~v~~~---~~-------~iD~d  241 (529)
                          .+| .+|+...-.| |.++.        ..+..+.            .+..++++....   .+       ...++
T Consensus       134 ~~~g~t~r~~il~~~~~yHG~t~~--------a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  205 (460)
T PRK06105        134 NALGRPEKKKIISRQRGYHGVTIA--------SASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLAN  205 (460)
T ss_pred             HhcCCCCCcEEEEecCccCCcchh--------heeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHH
Confidence                133 4677766543 32211        1111110            011122221000   00       01246


Q ss_pred             HHHHHhhh---cCCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEecccc-cccccccccCCCCC-cccEEEe
Q 009673          242 MLEKTAIL---FRPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVVADPFK-YCDVVTT  310 (529)
Q Consensus       242 ~le~~i~~---~~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~-~Gli~~~~~~~~~~-~aDiv~~  310 (529)
                      ++++.+..   .++.+||+..  .+.+...+    +++++++|++||+++|+|++|. .|-........-+. ..|+++.
T Consensus       206 ~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~  285 (460)
T PRK06105        206 ELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILVM  285 (460)
T ss_pred             HHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeeee
Confidence            67777742   2456777753  22222333    8999999999999999999973 44332110000011 3688865


Q ss_pred             cccccccCC--CCeEEEeeCCCcchhHHHhhhccc-----c--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 009673          311 TTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA-----V--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS  381 (529)
Q Consensus       311 S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~-----~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~  381 (529)
                      +  |.++|.  ..|.+++++      ++.+.+...     .  ..++.++......+++ ++|+.+.++   +..+++.+
T Consensus       286 g--K~lggG~~P~~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~-a~L~~i~~~---~l~~~v~~  353 (460)
T PRK06105        286 S--KQLSSSYQPLSAVLMNE------KVYDPIADESGKIGTFGHGFTASGHPVAAAVAL-ENLAIIEER---DLVGNAAE  353 (460)
T ss_pred             e--cccccCcccceEEEEcH------HHHHHHhcccccCcccccCCCCCCCHHHHHHHH-HHHHHHHhc---cHHHHHHH
Confidence            4  999653  578888887      666655321     0  1223344333333333 367776543   45677777


Q ss_pred             HHHHHHHHHHhc-CcEEecC--CCCCceEEEccCCCC-----Cc-----HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCe
Q 009673          382 NCRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMG-----ID-----GARVEKILDMASITLNKNSVPGDKSALVPGG  448 (529)
Q Consensus       382 ~a~~l~~~L~~~-G~~v~~~--gt~~~~~~v~~~~~~-----i~-----~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~  448 (529)
                      ..++|.+.|++. .+.++..  |. .-+.-+.+....     .+     ...+.+.+.+.||.+...          ...
T Consensus       354 ~g~~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~----------g~~  422 (460)
T PRK06105        354 RGARLQARLRALADHPLVGEVRGV-GLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAM----------GDT  422 (460)
T ss_pred             HHHHHHHHHHHhhcCCCeEEEEec-ceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEec----------CCE
Confidence            788888887663 2222211  11 122223331110     00     134666777899998421          246


Q ss_pred             EEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          449 IRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       449 iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      +|+..| ++   ++++|++++.+.+.+++...
T Consensus       423 i~l~Pp-l~---it~~eid~~~~~l~~~l~~~  450 (460)
T PRK06105        423 LAFCPP-LI---ITAAQVDEMVDRFGRALDDV  450 (460)
T ss_pred             EEEECC-Cc---cCHHHHHHHHHHHHHHHHHH
Confidence            999754 43   56999999999999998753

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=99.27  E-value=7.1e-09  Score=109.61  Aligned_cols=323  Identities=15%  Similarity=0.114  Sum_probs=166.5

Q ss_pred             CCcHHHHHHHhhhhhc-cCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCC-CCceeeecCChHHHHHHHHHhhc-
Q 009673          113 FTSRAVMEAVGSCLTN-KYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN-KWGVNVQPLSGSPANFEVYTAIL-  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~-~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~-~~~~~V~~~sGs~A~~~~l~all-  189 (529)
                      .-.|.|.+|+...+.. .+..+.   . + .++   ...++ .+++.++...+.. ...+....+||++|+..++.... 
T Consensus        51 h~~p~v~~ai~~ql~~~~~~~~~---~-~-~~~---~~~~l-ae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~  121 (412)
T TIGR02407        51 HNNPKLKQALIDYLADDGIIHSL---D-M-ATE---AKREF-LETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARK  121 (412)
T ss_pred             CCCHHHHHHHHHHHhhccceecc---c-c-CcH---HHHHH-HHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhh
Confidence            4578999998877753 121110   0 1 111   11222 2555555321110 00022224799999998886442 


Q ss_pred             -CCCCEEEEcCCCCCccccccccccccccccccce----------EEEEEcccCC-CC-CCCCHHHHHHHhhhc-----C
Q 009673          190 -KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY----------FESMPYRLDE-ST-GLVDYDMLEKTAILF-----R  251 (529)
Q Consensus       190 -~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~----------~~~v~~~v~~-~~-~~iD~d~le~~i~~~-----~  251 (529)
                       ....+|+...-.|-|.- .+      .++..+..          ..++.+|... .. ..-+++.+++.+.++     +
T Consensus       122 ~tgr~~ii~~~~~yHG~t-~~------als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~  194 (412)
T TIGR02407       122 VTGRSNVVSFTNAFHGMT-LG------SLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDL  194 (412)
T ss_pred             hcCCCeEEEECCCcCCch-HH------HHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCc
Confidence             22357887765432221 00      01111100          0112222210 00 012467788887632     3


Q ss_pred             CcEEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEeccccccc--CCC
Q 009673          252 PKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR--GPR  320 (529)
Q Consensus       252 pklIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~--Gpr  320 (529)
                      +.+|++..- +..+     ..-+++|+++|++||+++|.|+++. |+--.|.. . .... ..|++++  .|+++  |.+
T Consensus       195 ~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~a~~~~~v~PDi~~~--~K~lg~~G~p  271 (412)
T TIGR02407       195 PAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQA-GCGRTGTFFSFEPAGIEPDIVCL--SKSISGYGLP  271 (412)
T ss_pred             eEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhHHhcccCCCCCEEEe--chhccCCccc
Confidence            466776522 1122     2248899999999999999999964 43111100 0 0011 3588765  49984  556


Q ss_pred             CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHH-hcCchHHHHHHHHHHHHHHHHHHHHh----cC-
Q 009673          321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH-AQSPEFKVYQNKVVSNCRALASRLVE----LG-  394 (529)
Q Consensus       321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~-~~~~~~~~~~~~i~~~a~~l~~~L~~----~G-  394 (529)
                      .|++++++      ++ +.+.........++ +....++..++++. +.+.   ++.+++.+..+++.+.|+.    .+ 
T Consensus       272 igav~~~~------~~-~~~~~~~~~~T~~g-npl~~aaa~a~l~~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~  340 (412)
T TIGR02407       272 LALTLIKP------EL-DVWKPGEHNGTFRG-NNLAFVTATAALEYYWSDD---AFEKAVQRKSEIIQERLDRIVAEYPE  340 (412)
T ss_pred             eeEEEEch------hh-hccCCCccCCCCCc-cHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            79999987      44 33332222222333 23333333335664 4332   3445555556666666654    22 


Q ss_pred             cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673          395 YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH  474 (529)
Q Consensus       395 ~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~  474 (529)
                      +.....+ ...+.++.+... .....+.+.|.+.||.+...   +    .....|||..+..    ++++|++++.+.|+
T Consensus       341 ~~~~vrg-~Gl~~~l~l~~~-~~~~~~~~~~~~~Gv~v~~~---~----~~~~~lr~~p~l~----~t~~~i~~~~~~l~  407 (412)
T TIGR02407       341 LIKQVRG-RGLMQGIECGDG-DLAGKIAKAAFENGLIIETS---G----PNDEVIKLLPPLT----IDEETLQQGLDILE  407 (412)
T ss_pred             ceEeeec-ceeEEEEEecCh-HHHHHHHHHHHHCCCEEecc---C----CCCCEEEEECCCC----CCHHHHHHHHHHHH
Confidence            2111111 234456666431 12356777888899998532   0    1246799976543    56999999999999


Q ss_pred             HHHH
Q 009673          475 EGVE  478 (529)
Q Consensus       475 ~~~~  478 (529)
                      +++.
T Consensus       408 ~~l~  411 (412)
T TIGR02407       408 QAVE  411 (412)
T ss_pred             HHHh
Confidence            8874

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=99.27  E-value=7.5e-12  Score=125.89  Aligned_cols=244  Identities=18%  Similarity=0.246  Sum_probs=54.5

Q ss_pred             CCCCCcHHHHHHHhhhhhccCC-------CCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673          110 SENFTSRAVMEAVGSCLTNKYS-------EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF  182 (529)
Q Consensus       110 sen~~~~~V~eal~~~l~~~y~-------~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~  182 (529)
                      +-.++++++.+++..... .|+       .|-.|.||       +.++    +.++.++|++..     +.+++.+.|++
T Consensus        14 GRs~l~~~a~~a~~~~a~-~Y~nLE~dl~~G~Rg~R~-------~~v~----~ll~~ltgAeaA-----~VvNnnaAAv~   76 (367)
T PF03841_consen   14 GRSPLSEEAIEAVAEVAS-GYSNLEYDLETGKRGSRY-------AHVE----ELLCELTGAEAA-----LVVNNNAAAVL   76 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccccccc-cccccccccccccccccc-------cccc----cccccccccccc-----ccccccccccc
Confidence            344678888888765442 232       23344443       2233    567889999864     22356668888


Q ss_pred             HHHHhhcCCCCEEEEcCC---CCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 009673          183 EVYTAILKPHDRIMGLDL---PHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG-  258 (529)
Q Consensus       183 ~~l~all~pGD~Vl~~~~---~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~-  258 (529)
                      .++.++. +|.+|++..-   +.||.+-  .   ...+..+|+  +.+.+...   ..-.+++.+++|++ +|.+|+-. 
T Consensus        77 L~l~~la-~~~EvIvsRGelVeiGgsFR--i---p~vm~~sGa--~lvEVGtt---N~t~~~Dye~AI~e-~Ta~ll~Vh  144 (367)
T PF03841_consen   77 LALNTLA-KGKEVIVSRGELVEIGGSFR--I---PDVMRQSGA--RLVEVGTT---NRTHLSDYEKAITE-NTAALLKVH  144 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccccc-cccccccccccccccccccc--c---ccccccccc--cccccccc---cccccccccccccc-ccccccccc
Confidence            8888776 5777776532   2333321  1   013344554  56665543   23456677889988 88877544 


Q ss_pred             CCCCC-----CCCCHHHHHHHHHHhCCEEEEeccccccccc----cccc--CC---CCC-cccEEEecccccccCCCCeE
Q 009673          259 ASAYP-----RDFDYPRMRQIADAVGALLMMDMAHISGLVA----ASVV--AD---PFK-YCDVVTTTTHKSLRGPRGGM  323 (529)
Q Consensus       259 ~s~~p-----~~~d~~~i~~ia~~~g~~livD~ah~~Gli~----~~~~--~~---~~~-~aDiv~~S~hK~l~GprgG~  323 (529)
                      .|||-     ...+++++.++|++||+++++|.+  +|...    .+..  ++   .+. ++|+|+||..|.|.||+.|+
T Consensus       145 ~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~Dlg--sG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQaGi  222 (367)
T PF03841_consen  145 TSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLG--SGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQAGI  222 (367)
T ss_dssp             ----------------HHHHHHHHHT--EEEE-T--THHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S-EE
T ss_pred             ccccccccccccccHHHHHHHHhhcCCcEEEECC--CCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCCeEE
Confidence            45552     256899999999999999999985  44331    1111  11   122 89999999999999999999


Q ss_pred             EEeeCCCcchhHHHhhhccccc-CCCCCCChHHHHHHHHHHHHHhcCch-----------HHHHHHHHHHHHHHHHHHHH
Q 009673          324 IFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPE-----------FKVYQNKVVSNCRALASRLV  391 (529)
Q Consensus       324 i~~~~~~~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~-----------~~~~~~~i~~~a~~l~~~L~  391 (529)
                      |++++      ++++++++... ..+.  ..-..++++..+|+....++           +..-.+.+.++++.|...|.
T Consensus       223 I~Gkk------~lI~~lk~~pl~Ralr--vdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~  294 (367)
T PF03841_consen  223 IVGKK------ELIEKLKKHPLGRALR--VDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLK  294 (367)
T ss_dssp             EEEEH------HHHHHHHHHHHTTT-B----HHHHHHHHHHHHH------------------------------------
T ss_pred             EEeCH------HHHHHHhhCCCcceEe--eCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccc
Confidence            99999      78887764321 1110  12346778877777554311           12334556666777777776


Q ss_pred             h
Q 009673          392 E  392 (529)
Q Consensus       392 ~  392 (529)
                      .
T Consensus       295 ~  295 (367)
T PF03841_consen  295 A  295 (367)
T ss_dssp             -
T ss_pred             c
Confidence            5

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.27  E-value=2.7e-09  Score=113.18  Aligned_cols=320  Identities=13%  Similarity=0.075  Sum_probs=175.4

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---  189 (529)
                      .-+|+|.+++...+. ++...... . +..   ...++  ..+++.++++-..+   ......||++|+..++....   
T Consensus        61 h~~p~v~~ai~~~~~-~~~~~~~~-~-~~~---~~~~~--la~~l~~~~~~~~~---~v~f~~sGseA~e~AlklAr~~~  129 (427)
T TIGR00508        61 YNHPRLNAAAQKQID-KMSHVMFG-G-FTH---KPAIE--LCQKLVKMTPNALD---CVFLADSGSVAVEVALKMALQYW  129 (427)
T ss_pred             CCCHHHHHHHHHHHH-hcCCcccc-c-cCC---HHHHH--HHHHHHhhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence            457888888887664 33211111 0 111   11222  23566677653322   23556899999998876432   


Q ss_pred             ----CCC-CEEEEcCCCCCccccccccccccccccccc-----------e--EEEEEcccCCC--C-CCCCHHHHHHHhh
Q 009673          190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----------Y--FESMPYRLDES--T-GLVDYDMLEKTAI  248 (529)
Q Consensus       190 ----~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~-----------~--~~~v~~~v~~~--~-~~iD~d~le~~i~  248 (529)
                          .+| .+|+...-.|-|+.. +      .....+.           .  ...++++....  . ..-|++++++.+.
T Consensus       130 ~~~~~~~r~~il~~~~~yHG~t~-~------~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~  202 (427)
T TIGR00508       130 QAKGEKNRQKFLTIRSGYHGDTF-G------AMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLME  202 (427)
T ss_pred             HhhCCCCccEEEEEcCCcCCccH-h------hhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHH
Confidence                133 578877765433311 0      0111110           0  01111111100  0 0125677777776


Q ss_pred             hc--CCcEEEEcC--CCCCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEEEecccccc
Q 009673          249 LF--RPKLIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSL  316 (529)
Q Consensus       249 ~~--~pklIi~~~--s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv~~S~hK~l  316 (529)
                      ..  +..+|++..  +..++     ..++++|+++|++||+++|+|++| .|+...|..  ..-+. ..|+++  +.|.|
T Consensus       203 ~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~-tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l  279 (427)
T TIGR00508       203 LHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIA-TGFGRTGKLFACEHAGVVPDILC--VGKAL  279 (427)
T ss_pred             hcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCCccchhhhcCCCCCEEE--echhh
Confidence            42  345666653  33332     346899999999999999999998 564322211  11111 368876  57998


Q ss_pred             cCC--CCeEEEeeCCCcchhHHHhhhcccc-----cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Q 009673          317 RGP--RGGMIFFKKDPVLGVELESAINNAV-----FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR  389 (529)
Q Consensus       317 ~Gp--rgG~i~~~~~~~~~~~l~~~i~~~~-----~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~  389 (529)
                      .|.  ..+.+++++      ++.+.++...     .....++ +...+++..++++.+...   +..+++.++.++|.+.
T Consensus       280 ~gG~~p~~a~~~~~------~~~~~~~~~~~~~~~~~~T~~g-~p~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~  349 (427)
T TIGR00508       280 TGGYMTLSATVTTD------KVAQTISSGEAGCFMHGPTFMG-NPLACAVAEASLAILLEG---EWQKQVSAIENQLKRE  349 (427)
T ss_pred             hcCcccceEEEEcH------HHHHHHhcCCCCccccCCCCCc-CHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHH
Confidence            442  346677766      6666654321     1122233 333444444467765443   3457777888889998


Q ss_pred             HHhcCcE-EecCC-CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673          390 LVELGYK-LVSGG-SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV  467 (529)
Q Consensus       390 L~~~G~~-v~~~g-t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~  467 (529)
                      |++.+.. .+... ....+..+.+... .+...+.+.|.+.||.+...          ...+|+..+..    ++++|++
T Consensus       350 L~~l~~~~~i~~vrg~G~~~~i~~~~~-~~~~~~~~~l~~~Gv~~~~~----------~~~l~~~ppl~----~t~~~id  414 (427)
T TIGR00508       350 LSPLRKNPVVKDVRVLGAIGVVEMYKP-VNVEELQKKFVEQGVWIRPF----------GKLIYVMPPYI----ITTEQLQ  414 (427)
T ss_pred             HHHhhcCCCEEeEeccccEEEEEECCc-cCHHHHHHHHHHCCeEEEec----------CCEEEEECCCC----CCHHHHH
Confidence            8774321 11110 0123444444322 23466788888899998421          13689976533    5689999


Q ss_pred             HHHHHHHHHHH
Q 009673          468 AIADFIHEGVE  478 (529)
Q Consensus       468 ~la~~i~~~~~  478 (529)
                      ++.+.+++++.
T Consensus       415 ~~~~~l~~~l~  425 (427)
T TIGR00508       415 KLTAALIEALH  425 (427)
T ss_pred             HHHHHHHHHHh
Confidence            99999999875

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=99.27  E-value=2.2e-09  Score=113.69  Aligned_cols=319  Identities=16%  Similarity=0.097  Sum_probs=172.7

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---  189 (529)
                      .-.|.|.+|+...+.. .......   ...++   ...++ .+++.+++....+   ......|||+|+..++....   
T Consensus        59 h~~p~i~~Ai~~q~~~-~~~~~~~---~~~~~---~~~~l-a~~L~~~~p~~~~---~v~f~~SGsEAve~AlklAr~~~  127 (428)
T PRK07986         59 YNHPQLNAAMKSQIDA-MSHVMFG---GITHP---PAIEL-CRKLVAMTPQPLE---CVFLADSGSVAVEVAMKMALQYW  127 (428)
T ss_pred             CCCHHHHHHHHHHHhh-cCCcccc---ccCCH---HHHHH-HHHHHhhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence            3468899888877643 2111110   00112   11222 3666776643222   23456899999998876432   


Q ss_pred             ----CCCCEEEEcCCCCCccccccccccccccccccc-------------eEEEEEcccCCCC--C-CCCHHHHHHHhhh
Q 009673          190 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDEST--G-LVDYDMLEKTAIL  249 (529)
Q Consensus       190 ----~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~-------------~~~~v~~~v~~~~--~-~iD~d~le~~i~~  249 (529)
                          ....+|+...-.|-|.- .+      ..+..+.             ....++++.....  + .-|++++++.++.
T Consensus       128 ~~~g~~r~kii~~~~~yHG~t-~~------a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~  200 (428)
T PRK07986        128 QAKGEPRQRFLTLRHGYHGDT-FG------AMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAA  200 (428)
T ss_pred             HhcCCCCcEEEEECCCcCCCc-Hh------hhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHh
Confidence                22367888876542221 01      0111110             0011122110000  0 2356778887764


Q ss_pred             c--CCcEEEEcC--CCCCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEeccccccc
Q 009673          250 F--RPKLIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR  317 (529)
Q Consensus       250 ~--~pklIi~~~--s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~  317 (529)
                      .  +..+|++..  ...++     ...+++|+++|++||+++|+|++| .|+--.|.. . .-+. ..|+++  +.|.+.
T Consensus       201 ~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~-tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~  277 (428)
T PRK07986        201 HRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA-TGFGRTGKLFACEHAGIAPDILC--LGKALT  277 (428)
T ss_pred             CCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCCeeeecccCCCCCEEE--echhhh
Confidence            2  334566653  23333     123899999999999999999998 664222211 0 0111 358886  579985


Q ss_pred             CC--CCeEEEeeCCCcchhHHHhhhcccc-----cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 009673          318 GP--RGGMIFFKKDPVLGVELESAINNAV-----FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL  390 (529)
Q Consensus       318 Gp--rgG~i~~~~~~~~~~~l~~~i~~~~-----~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L  390 (529)
                      |.  ..|.+++++      ++.+.+....     ...++++ +....++..++|+.+.+.   ++.+++.++.++|.+.|
T Consensus       278 gG~~p~~av~~~~------~i~~~~~~~~~~~~~~~~T~~g-~p~~~aaa~a~L~~i~~~---~~~~~~~~~g~~l~~~l  347 (428)
T PRK07986        278 GGTMTLSATLTTR------EVAETISNGEAGCFMHGPTFMG-NPLACAVANASLSLLESG---DWQQQVAAIEAQLREEL  347 (428)
T ss_pred             CCcccCcchhchH------HHHHHhhcCCCCccccCCCCCc-CHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHH
Confidence            32  446667776      6666654311     1223334 333444444467766543   34667777778888888


Q ss_pred             Hhc-CcEEecC--CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673          391 VEL-GYKLVSG--GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV  467 (529)
Q Consensus       391 ~~~-G~~v~~~--gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~  467 (529)
                      ++. .+..+..  + ...+..+.+... .+...+.+.|.+.||.+...          ...||+.-| ++   ++++|++
T Consensus       348 ~~l~~~~~i~~vRg-~Gl~~~ve~~~~-~~~~~~~~~l~~~Gl~~~~~----------g~~i~~~Pp-l~---it~~ei~  411 (428)
T PRK07986        348 APLRDAPMVADVRV-LGAIGVVETTRP-VNMAALQRFFVEQGVWIRPF----------GKLIYLMPP-YI---ILPEQLQ  411 (428)
T ss_pred             HHHhcCCCEEeEec-cceEEEEEeCCc-ccHHHHHHHHHHCCcEEEec----------CCEEEEeCC-CC---CCHHHHH
Confidence            763 2322221  1 123333444321 13456778888999998431          247999644 44   6799999


Q ss_pred             HHHHHHHHHHH
Q 009673          468 AIADFIHEGVE  478 (529)
Q Consensus       468 ~la~~i~~~~~  478 (529)
                      ++.++|.+++.
T Consensus       412 ~~~~~l~~~l~  422 (428)
T PRK07986        412 RLTAAVNRAVQ  422 (428)
T ss_pred             HHHHHHHHHHh
Confidence            99999999885

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=99.26  E-value=4.7e-09  Score=112.29  Aligned_cols=187  Identities=17%  Similarity=0.223  Sum_probs=110.3

Q ss_pred             HHHHHHHHHHhCCEEEEecccccccccccccCCCCC----cccEEEecccccc-cCCCCeEEEeeCCCcchhHHHhhhcc
Q 009673          268 YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINN  342 (529)
Q Consensus       268 ~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~----~aDiv~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~  342 (529)
                      +++|+++|++||+++|+|+.+ .|+...+.. .++.    ..|++  |++|.+ +|+|.|++++++      ++.+.+..
T Consensus       242 l~~l~~l~~~~gillI~DEV~-tg~gr~g~~-~a~~~~~v~pDi~--t~sK~l~~G~pig~v~~~~------~i~~~~~~  311 (451)
T PRK06918        242 VQEVRNICSEHGILFVADEIQ-TGFARTGKY-FAIEHFDVVPDLI--TVSKSLGAGVPISGVIGRK------EIMDESAP  311 (451)
T ss_pred             HHHHHHHHHHcCCEEEEeccc-cCcCccCce-ehhHhcCCCCCEE--eeehhhcCCCccEEEEEcH------HHHhccCC
Confidence            889999999999999999984 455333321 1111    25755  577998 678889999987      67776654


Q ss_pred             cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEec--CCCCCceEEEccC-CC--C
Q 009673          343 AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS--GGSDNHLVLVDLR-PM--G  415 (529)
Q Consensus       343 ~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~--~gt~~~~~~v~~~-~~--~  415 (529)
                      .......+++.....++++ +++.+.+.++.   +++.+..+.+.+.|++.  ++.++.  .+. ..+..+.+. +.  .
T Consensus       312 ~~~~~T~~g~~l~~aaa~a-~l~~i~~~~~~---~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~-G~~~~~~~~~~~~~~  386 (451)
T PRK06918        312 GELGGTYAGSPLGCAAALA-VLDIIEKENLN---DRAIELGKVVMNRFEEMKNKYNCIGDVRGL-GAMCAFELVQDRKTK  386 (451)
T ss_pred             CCcCcCCCcCHHHHHHHHH-HHHHHHHCCHH---HHHHHHHHHHHHHHHHHHhhCCCceeeccc-eeEEEEEEccCCCcC
Confidence            3333344454444444443 56655444443   33444455566665542  222211  122 223333221 10  1


Q ss_pred             C----cHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          416 I----DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       416 i----~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      .    ....+.+.|.++||.+.    |+..  + .+.+||+.+..    +++++++++++.|.+++...
T Consensus       387 ~~~~~~~~~l~~~~~~~Gvlv~----~~~~--~-~~~lrl~p~l~----~t~~~id~~l~~l~~~l~~~  444 (451)
T PRK06918        387 EPDKTLTANICKEANKRGLLLL----SAGT--Y-GNVIRVLMPLV----ITDEQLEEGLTIIEESLQAC  444 (451)
T ss_pred             CCcHHHHHHHHHHHHHCCeEEe----ecCC--C-CCEEEEECCCc----cCHHHHHHHHHHHHHHHHHH
Confidence            1    12345666678999984    3311  1 36799986542    45899999999999988654

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=99.26  E-value=6.2e-09  Score=110.99  Aligned_cols=322  Identities=17%  Similarity=0.135  Sum_probs=168.9

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---  189 (529)
                      .-.|+|.+++...+.+ ...+..   +...++   ...+ ..+++.+++....+.   ....+||++|+..++....   
T Consensus        65 h~~p~v~~ai~~ql~~-l~~~~~---~~~~~~---~~~~-la~~L~~~~p~~~~~---v~f~~sGseAve~AlklAr~~~  133 (445)
T PRK09221         65 HGRPEIVEAVARQAAT-LDYAPA---FQMGHP---LAFE-LAERLAELAPGGLDH---VFFTNSGSESVDTALKIALAYH  133 (445)
T ss_pred             CCCHHHHHHHHHHHHh-ccCccc---cccCCH---HHHH-HHHHHHHhCCCCCCE---EEEeCCcHHHHHHHHHHHHHHH
Confidence            3578888888877643 211111   111122   1222 336677776432221   2446899999998876432   


Q ss_pred             ---C-C-CCEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccCCCC--CC--------CCHHH
Q 009673          190 ---K-P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDEST--GL--------VDYDM  242 (529)
Q Consensus       190 ---~-p-GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~------------~~~~v~~~v~~~~--~~--------iD~d~  242 (529)
                         . + ..+|+...-.|-|.- .+      .++..+.            .+..++++.+...  +.        -..++
T Consensus       134 ~~~g~~~r~~ii~~~~~yHG~t-~g------als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (445)
T PRK09221        134 RARGQGTRTRLIGRERGYHGVG-FG------GISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADD  206 (445)
T ss_pred             HhcCCCCCcEEEEECCCcCccc-hh------hhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHH
Confidence               1 2 247887765442220 01      0111110            0112222210000  00        11356


Q ss_pred             HHHHhhhc---CCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEecccc-cccccccccCCCCC-cccEEEec
Q 009673          243 LEKTAILF---RPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVVADPFK-YCDVVTTT  311 (529)
Q Consensus       243 le~~i~~~---~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~-~Gli~~~~~~~~~~-~aDiv~~S  311 (529)
                      +++.+...   +..+|++..  ++.+...+    +++++++|++||+++|+|++|. .|-........-+. ..|++++ 
T Consensus       207 l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~~-  285 (445)
T PRK09221        207 LERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIITF-  285 (445)
T ss_pred             HHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEEe-
Confidence            77777532   345666652  22233445    8999999999999999999974 22211110000011 2587765 


Q ss_pred             ccccccC--CCCeEEEeeCCCcchhHHHhhhccc-------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 009673          312 THKSLRG--PRGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN  382 (529)
Q Consensus       312 ~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~-------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~  382 (529)
                       .|.++|  ...|.+++++      ++.+.+...       ....+.+++.....+++ ++|+.+..+   ...+++.+.
T Consensus       286 -gK~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~-a~L~~i~~~---~l~~~~~~~  354 (445)
T PRK09221        286 -AKGLTNGAIPMGAVIASD------EIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGL-ATLDIYREE---DLFERAAEL  354 (445)
T ss_pred             -ccccccCcccceeeEEcH------HHHHhhccCcccccccccccCCCcCHHHHHHHH-HHHHHHHhc---cHHHHHHHH
Confidence             499854  3467777776      565544321       11223344344333333 467766543   346677777


Q ss_pred             HHHHHHHHHhc-CcEEecCCC-CCceEEEccCCC----CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCC
Q 009673          383 CRALASRLVEL-GYKLVSGGS-DNHLVLVDLRPM----GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAM  456 (529)
Q Consensus       383 a~~l~~~L~~~-G~~v~~~gt-~~~~~~v~~~~~----~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~  456 (529)
                      .++|.+.|++. ++..+.+-. ..-+.-+.+...    ......+.+.|.+.||.+..          ....+|+..+ +
T Consensus       355 g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~----------~~~~lr~~Pp-l  423 (445)
T PRK09221        355 APYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRY----------TGDTIALSPP-L  423 (445)
T ss_pred             HHHHHHHHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHHHHCCeEEee----------cCCEEEEECC-c
Confidence            88888888763 333222100 111222233211    11124566778889999843          1247999754 4


Q ss_pred             ccCCCCHHHHHHHHHHHHHHHH
Q 009673          457 TTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       457 tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +   ++++|++++.+.|++++.
T Consensus       424 ~---~t~~eid~~~~~l~~~l~  442 (445)
T PRK09221        424 I---IEKAQIDELVDALGDALR  442 (445)
T ss_pred             c---CCHHHHHHHHHHHHHHHH
Confidence            3   579999999999999885

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=99.26  E-value=1.3e-08  Score=108.39  Aligned_cols=322  Identities=18%  Similarity=0.125  Sum_probs=167.9

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---  189 (529)
                      .-.|.|.+|+...+.. ...+..   +...++.   .. ...+++.+++....+   .....+||++|+..++....   
T Consensus        62 h~~p~v~~ai~~ql~~-l~~~~~---~~~~~~~---~~-~la~~l~~~~p~~~~---~v~f~~sGseA~e~AlklAr~~~  130 (442)
T PRK13360         62 HGRPEIVEAVRAQAGE-LDYAPA---FQMGHPK---AF-ELANRIAEIAPGGLN---HVFFTNSGSESVDTALKIALAYH  130 (442)
T ss_pred             CCCHHHHHHHHHHHHh-CCCccc---CCcCCHH---HH-HHHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence            4578888888877642 221111   1111221   12 233667777632222   12456899999998876432   


Q ss_pred             ----CC-CCEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccCCCC--CCC--------CHHH
Q 009673          190 ----KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDEST--GLV--------DYDM  242 (529)
Q Consensus       190 ----~p-GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~------------~~~~v~~~v~~~~--~~i--------D~d~  242 (529)
                          ++ ..+|+...-.|-|.- .+      .++..|.            .+..++++.+...  +..        ..++
T Consensus       131 ~~~g~~~r~~ii~~~~~yHG~t-~g------als~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  203 (442)
T PRK13360        131 RARGEGSRTRLIGRERGYHGVG-FG------GISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADE  203 (442)
T ss_pred             HhcCCCCCcEEEEEcCCcCCcc-Hh------hhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHH
Confidence                12 257888775542220 01      0111110            0122222211000  100        2457


Q ss_pred             HHHHhhhc---CCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEecccc-cccccccccCCCCC-cccEEEec
Q 009673          243 LEKTAILF---RPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVVADPFK-YCDVVTTT  311 (529)
Q Consensus       243 le~~i~~~---~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~-~Gli~~~~~~~~~~-~aDiv~~S  311 (529)
                      +++.+...   ++.+|++..  +..+...+    +++|+++|++||+++|+|++|. .|-........-+. ..|++++ 
T Consensus       204 le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDivt~-  282 (442)
T PRK13360        204 LERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTC-  282 (442)
T ss_pred             HHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCceeee-
Confidence            77777532   344566652  22223445    9999999999999999999983 33322111000111 3588754 


Q ss_pred             ccccccC--CCCeEEEeeCCCcchhHHHhhhccc-------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 009673          312 THKSLRG--PRGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN  382 (529)
Q Consensus       312 ~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~-------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~  382 (529)
                       .|.+.|  ...|.+++++      ++.+.+...       ...++.++ +...+++..++|+.+..++   ..+++.++
T Consensus       283 -gK~l~gG~~P~gav~~~~------~i~~~~~~~~~~~~~~~~~~T~~g-~pl~~aaa~a~L~~l~~~~---l~~~~~~~  351 (442)
T PRK13360        283 -AKGLTNGAIPMGAVFVSS------EIHDAFMQGPEAGIEFFHGYTYSG-HPLACAAALATLDLYEREG---LLTRAARL  351 (442)
T ss_pred             -eeccccCccceEEEEEcH------HHHHHhhcCCccccccccCCCCCC-CHHHHHHHHHHHHHHHhCC---HHHHHHHH
Confidence             699964  2355566666      555544321       11223344 3334444444677665433   45666777


Q ss_pred             HHHHHHHHHhcC-cEEecC--CCCCceEEEccCCC--C--CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCC
Q 009673          383 CRALASRLVELG-YKLVSG--GSDNHLVLVDLRPM--G--IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPA  455 (529)
Q Consensus       383 a~~l~~~L~~~G-~~v~~~--gt~~~~~~v~~~~~--~--i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~  455 (529)
                      .+++.+.|++.+ +..+.+  |. .-+.-+.+.+.  +  .....+...|.++||.+...          ...+||..+.
T Consensus       352 g~~l~~~l~~l~~~~~v~~vrG~-Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~----------~~~lr~~Ppl  420 (442)
T PRK13360        352 APYWEDALHSLRDAPHVIDIRNL-GLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYT----------GDILALSPPL  420 (442)
T ss_pred             HHHHHHHHHHhhcCCCeeeeecc-ceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEec----------CCEEEEeCCC
Confidence            778888887632 322211  11 11111222211  1  11245666777899998431          2469997553


Q ss_pred             CccCCCCHHHHHHHHHHHHHHHHH
Q 009673          456 MTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       456 ~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                       +   ++++|++++.+.|.++++.
T Consensus       421 -~---~t~~eid~~~~~l~~~l~~  440 (442)
T PRK13360        421 -I---IEEAQIDELFDILAQALKE  440 (442)
T ss_pred             -c---cCHHHHHHHHHHHHHHHHH
Confidence             3   5699999999999998853

>PRK06541 hypothetical protein; Provisional

Probab=99.26  E-value=7e-09  Score=110.99  Aligned_cols=215  Identities=17%  Similarity=0.157  Sum_probs=122.3

Q ss_pred             HHHHHHhhhc---CCcEEEEcC-CCC-CCCCC----HHHHHHHHHHhCCEEEEeccc-ccccccccccCCCCC-cccEEE
Q 009673          241 DMLEKTAILF---RPKLIIAGA-SAY-PRDFD----YPRMRQIADAVGALLMMDMAH-ISGLVAASVVADPFK-YCDVVT  309 (529)
Q Consensus       241 d~le~~i~~~---~pklIi~~~-s~~-p~~~d----~~~i~~ia~~~g~~livD~ah-~~Gli~~~~~~~~~~-~aDiv~  309 (529)
                      +.+++.+...   +..+|++.. .+. +...+    +++|+++|++||+++|+|++| .+|-........-+. ..|+++
T Consensus       208 ~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt  287 (460)
T PRK06541        208 DRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT  287 (460)
T ss_pred             HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEE
Confidence            6677777532   334555542 122 22344    899999999999999999997 344322110000011 358876


Q ss_pred             eccccccc-CC-CCeEEEeeCCCcchhHHHhhhccc--cc--CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673          310 TTTHKSLR-GP-RGGMIFFKKDPVLGVELESAINNA--VF--PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC  383 (529)
Q Consensus       310 ~S~hK~l~-Gp-rgG~i~~~~~~~~~~~l~~~i~~~--~~--p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a  383 (529)
                        +.|.++ |+ +.|.+++++      ++.+.+...  .+  .+..+++.. .+++..+.++.+..+   +..+++.++.
T Consensus       288 --~gK~l~~G~~pigav~~~~------~i~~~~~~~~~~~~~~~T~~gnp~-~~aaala~l~~l~~~---~~~~~~~~~g  355 (460)
T PRK06541        288 --CAKGITSGYSPLGAMIASD------RLFEPFLDGPTMFLHGYTFGGHPV-SAAVALANLDIFERE---GLLDHVRDNE  355 (460)
T ss_pred             --ecccccCCccceeEEEEcH------HHHHHhhcCCCccccCCCCCCCHH-HHHHHHHHHHHHHhc---cHHHHHHHHH
Confidence              569985 43 567777776      565554322  11  122333233 333333356655433   3467778888


Q ss_pred             HHHHHHHHhc-CcEEec--CCCCCceEEEccCCC-----CCc--------HHHHHHhHhcCCeEEcCCCCCCCCCCCCCC
Q 009673          384 RALASRLVEL-GYKLVS--GGSDNHLVLVDLRPM-----GID--------GARVEKILDMASITLNKNSVPGDKSALVPG  447 (529)
Q Consensus       384 ~~l~~~L~~~-G~~v~~--~gt~~~~~~v~~~~~-----~i~--------~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~  447 (529)
                      ++|.+.|++. .+.++.  .+ ...+.-+.+...     ..+        ...+.+.|.+.||.+...  |     .+..
T Consensus       356 ~~l~~~L~~l~~~~~v~~vrg-~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--~-----~g~~  427 (460)
T PRK06541        356 PAFRATLEKLLDLPIVGDVRG-DGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRAD--D-----RGDP  427 (460)
T ss_pred             HHHHHHHHHhhcCCCeEEEEe-cceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEec--C-----CCCC
Confidence            8888888773 232221  11 122333333110     000        023556677899998531  1     1235


Q ss_pred             eEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          448 GIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       448 ~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      .|||+.+ ++   ++++|++++.+.+.+++..
T Consensus       428 ~lrl~Pp-l~---~t~~~id~~~~~l~~~l~~  455 (460)
T PRK06541        428 VVQLAPP-LI---SGQEEFDEIEQILRSVLTE  455 (460)
T ss_pred             EEEEECC-CC---CCHHHHHHHHHHHHHHHHH
Confidence            7999865 33   6799999999999998864

>PRK07046 aminotransferase; Validated

Probab=99.25  E-value=8.5e-09  Score=110.07  Aligned_cols=314  Identities=13%  Similarity=0.072  Sum_probs=166.6

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cCC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP  191 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~p  191 (529)
                      -.|.|.+|+...+......+.+       ++    .+....+++.++++.+.    + ...+|||+|+..++...  ...
T Consensus        92 ~~p~i~~Av~~q~~~~~~~~~~-------~~----~~~~lAe~l~~~~~~~~----v-~F~nSGtEA~e~AlrlAR~~TG  155 (453)
T PRK07046         92 SPAPVARALAEQARRGLTTMLP-------SE----DAAWVGEELARRFGLPY----W-QVATTATDANRFVLRWARAVTG  155 (453)
T ss_pred             CCHHHHHHHHHHHHhCCCCCCC-------CH----HHHHHHHHHHHHhCCCE----E-EEECCHHHHHHHHHHHHHHhhC
Confidence            4689999998877643322211       12    22223467777776442    2 44689999999888643  223


Q ss_pred             CCEEEEcCCCCCccccccccc--cccc---cccccceE----EEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC--
Q 009673          192 HDRIMGLDLPHGGHLSHGFMT--PKRR---VSGTSIYF----ESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS--  260 (529)
Q Consensus       192 GD~Vl~~~~~~~g~~s~g~~~--~~~~---i~~~g~~~----~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s--  260 (529)
                      .++|+...-.|-|+.......  ....   ....|...    ..+.++      .-|++.+++.+...+..+||+..-  
T Consensus       156 r~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~nd~~~l~~~l~~~~vAavi~EPi~g  229 (453)
T PRK07046        156 RPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE------FNDLAALEAALADGDVAAVLAEPAMT  229 (453)
T ss_pred             CCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC------CCCHHHHHHHhCCCCeEEEEECCCCC
Confidence            467887764433321000000  0000   00001000    011111      237899998885435667777622  


Q ss_pred             CCCCCC----CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEeccccccc-CCCCeEEEeeCCCcchh
Q 009673          261 AYPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGV  334 (529)
Q Consensus       261 ~~p~~~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~-GprgG~i~~~~~~~~~~  334 (529)
                      +.+...    -+++++++|++||+++|.|+++.++.-..+. ..-+. ..|+++.  .|.++ |...|.+++++      
T Consensus       230 ~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~-~~~~gv~PDi~t~--gK~lggG~Pi~av~g~~------  300 (453)
T PRK07046        230 NIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGY-TRAHGLEPDFLVV--GKPIAGGVPCAVYGFSA------  300 (453)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcch-hHHhCCCccceee--hhhhcCCCcceeeeehH------
Confidence            222222    2799999999999999999997622111111 11111 3688875  59985 45568888887      


Q ss_pred             HHHhhhccc---------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cCcEEecCC
Q 009673          335 ELESAINNA---------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLVSGG  401 (529)
Q Consensus       335 ~l~~~i~~~---------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~~v~~~g  401 (529)
                      ++.+.+...         ...++.++... .+++..+.|+.+.+++   ..+++.+..++|.+.|++    .++.....+
T Consensus       301 ~i~~~~~~~~~~~~~~~~~~~~T~~gnpl-~~aa~~a~L~~l~~~~---~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g  376 (453)
T PRK07046        301 ELAERAQAAKASAPPGHSGIGTTLSANAL-AMAAMRATLAEVMTEA---AYAHMLALAARLAAGLRAVIARHGLPWHVTR  376 (453)
T ss_pred             HHHHHHhhccccCCCCCceeCCCCcccHH-HHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence            666655421         01122233233 3443334577665433   345556666677777754    343321111


Q ss_pred             CCCceEEEccCCCC----------CcH---HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHH
Q 009673          402 SDNHLVLVDLRPMG----------IDG---ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVA  468 (529)
Q Consensus       402 t~~~~~~v~~~~~~----------i~~---~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~  468 (529)
                      ... ++.+.+....          .+.   ..+...|.+.||.+..    .      ...++++.+      ++++|+++
T Consensus       377 ~G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~----~------~~~~~~~p~------~t~~did~  439 (453)
T PRK07046        377 VGA-RVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITP----F------HNMMLVCPA------TTAADVDR  439 (453)
T ss_pred             eCc-EEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEec----c------cCcEEEeCC------CCHHHHHH
Confidence            111 2222221100          011   2345556678999842    1      134677643      56899999


Q ss_pred             HHHHHHHHHHH
Q 009673          469 IADFIHEGVEI  479 (529)
Q Consensus       469 la~~i~~~~~~  479 (529)
                      +++++.+++..
T Consensus       440 ~~~~~~~~l~~  450 (453)
T PRK07046        440 LVAAFDACLGE  450 (453)
T ss_pred             HHHHHHHHHHH
Confidence            99999998864

>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.25  E-value=4.9e-10  Score=111.61  Aligned_cols=331  Identities=18%  Similarity=0.182  Sum_probs=192.8

Q ss_pred             ecCCCCC----cHHHHHHHhhhhhccCCCCCCCCC-CCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673          108 IASENFT----SRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF  182 (529)
Q Consensus       108 ~asen~~----~~~V~eal~~~l~~~y~~G~p~~r-~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~  182 (529)
                      .+|.||.    .+++++.....+ .+|.-|..|-| |||....+-.+|    +++++++|++..     |...-|-.++.
T Consensus        99 ~aS~NfL~l~~~~~ike~a~~~l-rkyGvGsCGPrGFYGt~DvHldlE----~~iakF~G~E~a-----ivYs~gF~ti~  168 (467)
T KOG1358|consen   99 FASANFLGLIENEEIKEEASFTL-RKYGVGSCGPRGFYGTIDVHLDLE----KRIAKFMGTEDA-----IVYSYGFSTIE  168 (467)
T ss_pred             ccchhhhhhcccHHHHHHHHHHH-HHhCCCCcCCCcccccceeecccH----HHHHHhhCCcce-----eeeccccchhh
Confidence            3577764    678888887666 57877777666 566555555667    789999999973     34455668888


Q ss_pred             HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc------CCc---
Q 009673          183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF------RPK---  253 (529)
Q Consensus       183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~------~pk---  253 (529)
                      .++.|+.+.||.|.+..-.+.+..        +.+.++-  -.+..+.      ..|.++++....+.      +||   
T Consensus       169 S~ipafsKrGDIi~~de~~nfaIq--------~GlqlSR--S~i~~Fk------hndm~~lerll~E~~~~~~K~~k~~~  232 (467)
T KOG1358|consen  169 SAIPAFSKRGDIIFVDEAVNFAIQ--------KGLQLSR--STISYFK------HNDMEDLERLLPEQEDEDQKNPKKAL  232 (467)
T ss_pred             hcchhhhccCcEEEEehhhhHHHH--------HHHhhhh--heeEEec------CCCHHHHHHhccCcchhhhhcccccc
Confidence            899999999999997753221110        1111111  1233332      45666776555321      122   


Q ss_pred             ---EEEEc--CCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccc---cc--cC-CCCCcccEEEecccccccCCCCe
Q 009673          254 ---LIIAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SV--VA-DPFKYCDVVTTTTHKSLRGPRGG  322 (529)
Q Consensus       254 ---lIi~~--~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~---~~--~~-~~~~~aDiv~~S~hK~l~GprgG  322 (529)
                         .|++.  +-|++...|+.+|.++..++...++.|++..+|....   |+  +. .+....|++++|+.-.+ +..||
T Consensus       233 ~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~al-as~Gg  311 (467)
T KOG1358|consen  233 TRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETAL-ASGGG  311 (467)
T ss_pred             ceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccc-cccCc
Confidence               34443  5677789999999999999999999999988887654   22  11 22346789999988776 45678


Q ss_pred             EEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCC
Q 009673          323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGG  401 (529)
Q Consensus       323 ~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~g  401 (529)
                      +..++.-.    -..+++....+-+....|....-+|. .++..+..  -.+..+.++.....+-+.|+. .++.+.+. 
T Consensus       312 Fc~G~~~i----~~hQrLSg~~Y~fSAslPp~la~aa~-~ai~i~~~--~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~-  383 (467)
T KOG1358|consen  312 FCAGKSFI----ADHQRLSGSGYCFSASLPPYLAGAAI-KAILIEEW--NPEIVQPLRAKVAKFHAALSSNSGFIVSGS-  383 (467)
T ss_pred             eeecceee----EeeeeccccceeeeccCchhhhhhHH-HHHHHHhh--CcchhhhhhccccccchhhhcCCceEEecC-
Confidence            88885410    01122322111111122333333332 23332211  133455555555566666766 46666543 


Q ss_pred             CCCceEEEccCCCCCcHHH--------HHHhHhcCCeEEcCCC-CCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673          402 SDNHLVLVDLRPMGIDGAR--------VEKILDMASITLNKNS-VPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF  472 (529)
Q Consensus       402 t~~~~~~v~~~~~~i~~~~--------~~~~L~~~GI~v~~~~-~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~  472 (529)
                      ..+.+..+.+.....+.++        +.+.+.+ |+.+.... +-+......+-.|||.+.    .+|+++|++++++.
T Consensus       384 ~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~----a~~seeel~ra~~~  458 (467)
T KOG1358|consen  384 PESPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVS----AGMSEEELERAAEL  458 (467)
T ss_pred             cCCceeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEe----CCCCHHHHHHHHHH
Confidence            3455555545432222221        2233333 77664322 212111112457999764    47999999999999


Q ss_pred             HHHHHH
Q 009673          473 IHEGVE  478 (529)
Q Consensus       473 i~~~~~  478 (529)
                      |++...
T Consensus       459 ik~~~~  464 (467)
T KOG1358|consen  459 IKEVAS  464 (467)
T ss_pred             HHHHHH
Confidence            988755

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=99.25  E-value=1.2e-08  Score=108.76  Aligned_cols=200  Identities=20%  Similarity=0.189  Sum_probs=116.4

Q ss_pred             CCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEeccccccc-CCC
Q 009673          251 RPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPR  320 (529)
Q Consensus       251 ~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l~-Gpr  320 (529)
                      +..+||+..  ++.+...+    +++|.++|++||+++|+|++|. |+...+...  ..+. ..|+++  +.|.++ |.+
T Consensus       221 ~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~t-G~gr~G~~~a~~~~gv~pDivt--~~K~l~~G~p  297 (441)
T PRK05769        221 EVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQT-GMGRTGKMFAIEHFGVEPDIIT--LAKAIAGGLP  297 (441)
T ss_pred             ceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccceehhhccCCCCCEEE--EcccccCCcc
Confidence            455666652  22233455    9999999999999999999976 542222110  1111 358876  459884 566


Q ss_pred             CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC--cEEe
Q 009673          321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLV  398 (529)
Q Consensus       321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G--~~v~  398 (529)
                      .|++++++      ++.+..... ...+.++......++ ..+|+.+.+    +..+++.++.++|.+.|++..  +.++
T Consensus       298 ~gav~~~~------~i~~~~~~~-~~~T~~g~p~~~aaa-~a~L~~l~~----~~~~~~~~~g~~l~~~L~~l~~~~~~~  365 (441)
T PRK05769        298 LGAVIGRA------ELMFLPPGS-HANTFGGNPVAAAAA-LATLEELEE----GLLENAQKLGEYLRKELKELKEKYEFI  365 (441)
T ss_pred             cEEEEEeh------hhhhcCCCC-CCCCCCcCHHHHHHH-HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence            78888887      454433221 222333433333333 345766542    446677777888888886632  3332


Q ss_pred             cC--CCCCceEEEccCCC-C-Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673          399 SG--GSDNHLVLVDLRPM-G-ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD  471 (529)
Q Consensus       399 ~~--gt~~~~~~v~~~~~-~-i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~  471 (529)
                      ..  +. ..+.-+.+... . -+   ...+.+.|.+.||.+..         .+...+|+..+. +   ++++|++++.+
T Consensus       366 ~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~---------~~~~~lr~~p~l-~---~t~~~id~~~~  431 (441)
T PRK05769        366 GDVRGL-GLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLG---------AGKSAIRIIPPL-I---ITEEEADIGLE  431 (441)
T ss_pred             eeeecc-eEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEec---------CCCCEEEEeCCC-C---CCHHHHHHHHH
Confidence            21  11 12233333211 0 01   23456667789999842         123579997553 2   57999999999


Q ss_pred             HHHHHHHH
Q 009673          472 FIHEGVEI  479 (529)
Q Consensus       472 ~i~~~~~~  479 (529)
                      .+.+++..
T Consensus       432 ~l~~~l~~  439 (441)
T PRK05769        432 ILEEAIKE  439 (441)
T ss_pred             HHHHHHHH
Confidence            99998863

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.24  E-value=6.1e-09  Score=110.45  Aligned_cols=321  Identities=13%  Similarity=0.056  Sum_probs=174.1

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---  189 (529)
                      .-.|+|.+|+...+.+ .......  .+. ++   ... ...+++.+.+....+   -....+||++|+..++....   
T Consensus        60 h~~p~v~~ai~~q~~~-~~~~~~~--~~~-~~---~~~-~lae~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~~  128 (429)
T PRK06173         60 YNHPRLNAAATNQLAK-MSHIMFG--GFT-HE---PAV-ELAQKLLEILPPSLN---KIFFADSGSVAVEVAMKMALQYQ  128 (429)
T ss_pred             CCCHHHHHHHHHHHHh-cCCcccc--ccC-CH---HHH-HHHHHHHhhCCCCcC---EEEEeCCchHHHHHHHHHHHHHH
Confidence            3468888888876643 2110000  011 11   112 223566666642222   13456899999998876432   


Q ss_pred             ----CCC-CEEEEcCCCCCccccccccccccccccccc-------------eEEEEEcccCCCC---CCCCHHHHHHHhh
Q 009673          190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDEST---GLVDYDMLEKTAI  248 (529)
Q Consensus       190 ----~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~-------------~~~~v~~~v~~~~---~~iD~d~le~~i~  248 (529)
                          ++| .+|+...-.|-|. +.+      ..+..+.             ....++++.....   ..-+++.+++.+.
T Consensus       129 ~~~g~~~r~~ii~~~~~yHG~-t~~------a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~  201 (429)
T PRK06173        129 QAKGEVQRTKFATIRSGYHGD-TWH------AMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLE  201 (429)
T ss_pred             HHhCCCCCcEEEEECCCcCCc-chh------hhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHH
Confidence                133 4687777554332 111      1111110             0111222211000   0114566777775


Q ss_pred             hc--CCcEEEEcC--CCCCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEEEecccccc
Q 009673          249 LF--RPKLIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSL  316 (529)
Q Consensus       249 ~~--~pklIi~~~--s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv~~S~hK~l  316 (529)
                      .+  +..+||+..  ...++     ..-+++++++|++||+++|+|++| .|+--.|..  ..-+. ..|+++  +.|.+
T Consensus       202 ~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDiv~--~gK~l  278 (429)
T PRK06173        202 QKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-TGFGRTGKLFALEHAGVVPDIMC--IGKAL  278 (429)
T ss_pred             hCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh-cCCCcCCcchHHHhcCCCCCEEE--eehhh
Confidence            32  455677664  22222     223889999999999999999998 674222211  01111 368887  56998


Q ss_pred             cCC--CCeEEEeeCCCcchhHHHhhhccc-----ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Q 009673          317 RGP--RGGMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR  389 (529)
Q Consensus       317 ~Gp--rgG~i~~~~~~~~~~~l~~~i~~~-----~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~  389 (529)
                      .|.  ..+.++.++      ++.+.+...     ....+.++ +...+++..++|+.+.+.   +..+++.++.++|.+.
T Consensus       279 ~gG~~p~~a~~~~~------~i~~~~~~~~~~~~~~~~T~~g-~p~~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~  348 (429)
T PRK06173        279 TGGYLTLSATITTE------AIAQTICSGEAKCFMHGPTFMA-NPLACAIAAESIRLLLES---PWQQNIQRIEAQLKQE  348 (429)
T ss_pred             hCCccccceEEecH------HHHHHHhcCCCCccccCCCCCc-CHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHH
Confidence            432  456666666      555554321     11122333 333444444467766543   3466777778888888


Q ss_pred             HHhc-CcEEecC-CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673          390 LVEL-GYKLVSG-GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV  467 (529)
Q Consensus       390 L~~~-G~~v~~~-gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~  467 (529)
                      |++. +++.+.. .....+.-+.+... .+...+.+.|.+.||.+...          ...||+. |.++   ++++|++
T Consensus       349 L~~~~~~~~v~~vRg~Gl~~~iel~~~-~~~~~i~~~l~e~Gi~v~~~----------g~~l~~~-Ppl~---it~~ei~  413 (429)
T PRK06173        349 LAPAAEFDSVAEVRVLGAIGVVEMKEP-VNMATLQPRFVEHGIWVRPF----------GKLVYIM-PPFI---ISPDELS  413 (429)
T ss_pred             HHHhhcCCCeeeeeccceEEEEEeCCc-ccHHHHHHHHHHCCeEEEec----------CCEEEEe-CCcc---CCHHHHH
Confidence            8763 4443321 01234444555422 23456788888899998431          1479996 4455   6799999


Q ss_pred             HHHHHHHHHHHH
Q 009673          468 AIADFIHEGVEI  479 (529)
Q Consensus       468 ~la~~i~~~~~~  479 (529)
                      ++.+.|.+++..
T Consensus       414 ~~~~~l~~~l~~  425 (429)
T PRK06173        414 QLTSGLLRVLKQ  425 (429)
T ss_pred             HHHHHHHHHHHH
Confidence            999999999864

>PRK06062 hypothetical protein; Provisional

Probab=99.21  E-value=3.3e-08  Score=105.65  Aligned_cols=321  Identities=13%  Similarity=0.060  Sum_probs=164.2

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCC
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP  191 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~p  191 (529)
                      .-.|+|.+|+...+.. .....+  . +. ++   ... ...+++.+++.-..+.   ....+|||+|+..++... .-.
T Consensus        69 h~~p~v~~Ai~~q~~~-~~~~~~--~-~~-~~---~~~-~lae~L~~~~p~~~~~---v~f~~SGsEAve~AlklAr~~t  136 (451)
T PRK06062         69 HQHPKVVAAIQEQAAR-LCTVAP--A-HA-ND---ARS-EAARLIAERAPGDLSK---VFFTNGGADANEHAVRMARLHT  136 (451)
T ss_pred             CCCHHHHHHHHHHHHh-cCCcCC--c-cC-CH---HHH-HHHHHHHHhCCCCCCE---EEEcCChHHHHHHHHHHHHHhh
Confidence            3478899888877643 221111  1 11 12   112 2236666766432221   245689999999888643 223


Q ss_pred             C-CEEEEcCCCCCccccccccccccccccccc-----------eEEEEEcccCC-CCC--CCC-------HHHHHHHhhh
Q 009673          192 H-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----------YFESMPYRLDE-STG--LVD-------YDMLEKTAIL  249 (529)
Q Consensus       192 G-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~-----------~~~~v~~~v~~-~~~--~iD-------~d~le~~i~~  249 (529)
                      | .+|+...-.|-|... +      .++..+.           .+..++++... ..+  .-|       ++.+++++..
T Consensus       137 gr~~ii~~~~~yHG~t~-~------als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~  209 (451)
T PRK06062        137 GRPKVLSAYRSYHGGTG-S------AINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIEL  209 (451)
T ss_pred             CCceEEEEeCCCCCCCH-H------HHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHh
Confidence            3 567776644322210 0      0111110           00111111100 000  012       5777887753


Q ss_pred             c---CCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEEEeccccccc
Q 009673          250 F---RPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLR  317 (529)
Q Consensus       250 ~---~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv~~S~hK~l~  317 (529)
                      .   ++.+||+..  .+.+...+    +++++++|++||+++|+|++|. |+--.|..  ..-+. ..|++++  .|.|+
T Consensus       210 ~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~t-GfGRtG~~~a~~~~gv~PDi~t~--gK~lg  286 (451)
T PRK06062        210 EGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMA-GFGRTGKWFAIEHFGVVPDLITF--AKGVN  286 (451)
T ss_pred             cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeecccc-CCCcCcHHHHHHhcCCCCCeeee--chhhh
Confidence            2   345677652  22222444    8999999999999999999975 43111110  00011 3687765  59996


Q ss_pred             CC--CCeEEEeeCCCcchhHHHhhhcccc--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH-HHHHHHHHh
Q 009673          318 GP--RGGMIFFKKDPVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC-RALASRLVE  392 (529)
Q Consensus       318 Gp--rgG~i~~~~~~~~~~~l~~~i~~~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a-~~l~~~L~~  392 (529)
                      |.  ..|.+++++      ++.+.+....  ...+.++. ...+++..++|+.+.+++   ..+++.+.. ++|.+.|++
T Consensus       287 gG~~Pigav~~~~------~i~~~~~~~~~~~~~T~~gn-pl~~Aaa~a~L~~l~~~~---l~~~~~~~G~~~l~~~L~~  356 (451)
T PRK06062        287 SGYVPLGGVAISE------AIAATFADRPYPGGLTYSGH-PLACAAAVATINAMEEEG---IVENAARIGAEVLGPGLRE  356 (451)
T ss_pred             cCCcCcEEEEEcH------HHHHHhccCCCCCCCCCCCC-HHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHH
Confidence            52  456666666      5666554321  12234443 334444344677665443   344444443 355555554


Q ss_pred             c--CcEEec--CCCCCceEEEccCCC-----CCc--------HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCC
Q 009673          393 L--GYKLVS--GGSDNHLVLVDLRPM-----GID--------GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPA  455 (529)
Q Consensus       393 ~--G~~v~~--~gt~~~~~~v~~~~~-----~i~--------~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~  455 (529)
                      .  .+.++.  .|. ..+.-+.+...     ..+        ...+.+.|.+.||.+..   +       .+.+||..|.
T Consensus       357 l~~~~~~v~~vrG~-Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~---~-------~~~lrl~ppl  425 (451)
T PRK06062        357 LAERHPSVGEVRGL-GVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFV---N-------GNRIHVVPPC  425 (451)
T ss_pred             HHhcCCcEEeEecc-ccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEee---c-------CCEEEEECCc
Confidence            1  222221  111 12222222110     001        23567778889998732   1       2469997553


Q ss_pred             CccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          456 MTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       456 ~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                       +   ++++|++++.+.+.+++...
T Consensus       426 -~---~t~~eid~~~~~l~~~l~~~  446 (451)
T PRK06062        426 -T---VTEDEVREGLAILDAALAVA  446 (451)
T ss_pred             -c---CCHHHHHHHHHHHHHHHHHh
Confidence             3   56999999999999988643

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=99.19  E-value=5.7e-08  Score=104.05  Aligned_cols=315  Identities=16%  Similarity=0.091  Sum_probs=162.5

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCCC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH  192 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~pG  192 (529)
                      -.|.|.+++...+......+.       .++  .++|  ..+++.+.+.. .+.   ....+|||+|+..++... .-.|
T Consensus       116 ~~p~v~~av~~ql~~~~~~~~-------~~~--~~~~--lAe~l~~~~p~-~~~---v~f~~SGsEA~e~AlklAR~~tg  180 (474)
T PLN02482        116 ADDEVLAALAETMKKGTSFGA-------PCL--LENV--LAEMVIDAVPS-VEM---VRFVNSGTEACMGVLRLARAYTG  180 (474)
T ss_pred             CCHHHHHHHHHHHhhCCCCCC-------CCH--HHHH--HHHHHHHhCCC-CCE---EEEeCChHHHHHHHHHHHHHhcC
Confidence            479999999888754321111       111  2222  33666666632 121   244689999999887643 2223


Q ss_pred             -CEEEEcCCCCCccc-ccccccccc--c---cccccceE----EEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEcC
Q 009673          193 -DRIMGLDLPHGGHL-SHGFMTPKR--R---VSGTSIYF----ESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGA  259 (529)
Q Consensus       193 -D~Vl~~~~~~~g~~-s~g~~~~~~--~---i~~~g~~~----~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~~~  259 (529)
                       ++|+...-.|-|+. +.+......  .   ....+...    ..+.++      .-|++++++.+..+  +..+||+..
T Consensus       181 r~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~nd~~~l~~~l~~~~~~iAavI~Ep  254 (474)
T PLN02482        181 REKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAP------YNDLEAVKKLFEANKGEIAAVILEP  254 (474)
T ss_pred             CCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEec------CCChHHHHHHHHhCCCceEEEEECC
Confidence             57777664432221 000000000  0   00000000    011111      12788999888643  345666652


Q ss_pred             --CCCCCCCC----HHHHHHHHHHhCCEEEEeccccccccccccc-CCCCC-cccEEEecccccccC-CCCeEEEeeCCC
Q 009673          260 --SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDP  330 (529)
Q Consensus       260 --s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~~~~-~aDiv~~S~hK~l~G-prgG~i~~~~~~  330 (529)
                        ++.+...+    +++++++|++||+++|+|++| .|+-..... ..-+. ..|++++  .|.++| ...|.+++++  
T Consensus       255 v~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~-tGfR~g~~ga~~~~gv~PDi~t~--gK~lggG~Pigav~g~~--  329 (474)
T PLN02482        255 VVGNSGFIVPKKEFLEGLREITKENGALLVFDEVM-TGFRIAYGGAQEYFGITPDLTTL--GKVIGGGLPVGAYGGRR--  329 (474)
T ss_pred             CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCeecCcchHhHHhCCCCCEEEe--cchhhCCCceEEEEEcH--
Confidence              22222222    678999999999999999998 565221100 00011 3688654  699954 3456667777  


Q ss_pred             cchhHHHhhhccc--c-cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----CcEEecCCCC
Q 009673          331 VLGVELESAINNA--V-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----GYKLVSGGSD  403 (529)
Q Consensus       331 ~~~~~l~~~i~~~--~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~----G~~v~~~gt~  403 (529)
                          ++.+.+...  . ..++.++ +...+++..++|+.+.++   +..+++.++.++|.+.|++.    |++++..+-.
T Consensus       330 ----ei~~~~~~~~~~~~~~T~~g-npl~~aAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~  401 (474)
T PLN02482        330 ----EIMEMVAPAGPMYQAGTLSG-NPLAMTAGIHTLKRLQQP---GTYEYLDKITKKLIQGILEAGKKAGHEMCGGYIS  401 (474)
T ss_pred             ----HHHHhhccCCCcccccCcch-hHHHHHHHHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccc
Confidence                676666421  1 1122222 233344433467766543   34566677777888877663    4444321111


Q ss_pred             CceEEEccCCC---------CCc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673          404 NHLVLVDLRPM---------GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD  471 (529)
Q Consensus       404 ~~~~~v~~~~~---------~i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~  471 (529)
                      . ++-+.+...         .-+   ...+.+.|.++||.+.....|        .    +++.+   .++++|++++++
T Consensus       402 g-~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~--------~----~~psl---~ht~~dId~~l~  465 (474)
T PLN02482        402 G-MFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQFE--------A----GFTSL---AHTEEDIDFTIA  465 (474)
T ss_pred             e-EEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCCC--------C----CcCCC---CCCHHHHHHHHH
Confidence            1 221111110         011   124566677899998542111        0    11222   378999999999


Q ss_pred             HHHHHHH
Q 009673          472 FIHEGVE  478 (529)
Q Consensus       472 ~i~~~~~  478 (529)
                      .+++++.
T Consensus       466 al~~~l~  472 (474)
T PLN02482        466 AAERVLA  472 (474)
T ss_pred             HHHHHHH
Confidence            9998875

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=99.17  E-value=5.8e-08  Score=103.90  Aligned_cols=321  Identities=17%  Similarity=0.119  Sum_probs=167.7

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cCC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP  191 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~p  191 (529)
                      -.|.|.+|+...+. ++..+  ..++.  ++...+    ..++++++++-..+   .....+||++|+.+++...  ...
T Consensus        88 ~~p~v~~Ai~~ql~-~~~~~--~~~~~--~~~~~~----lae~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~tg  155 (459)
T PRK06082         88 GHPHVIEKVKEQMA-KLPFS--PRRFT--NETAIE----CAEKLTEIAGGELN---RVLFAPGGTSAIGMALKLARHITG  155 (459)
T ss_pred             CCHHHHHHHHHHHH-hCCCc--cCccC--CHHHHH----HHHHHHHhCCCCCC---EEEECCCcHHHHHHHHHHHHHhcC
Confidence            47899999887775 33221  11221  222222    33677777753322   2355689999999887643  122


Q ss_pred             CCEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccCCC-CC-CC------CHHHHHHHhhhc-
Q 009673          192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES-TG-LV------DYDMLEKTAILF-  250 (529)
Q Consensus       192 GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~------------~~~~v~~~v~~~-~~-~i------D~d~le~~i~~~-  250 (529)
                      ..+|+...-.|-|.- .+      .+++.+.            .+..++.+.... .+ ..      +++.+++.+... 
T Consensus       156 r~~ii~~~~~yHG~t-~~------a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~  228 (459)
T PRK06082        156 NFKVVSLWDSFHGAS-LD------AISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEG  228 (459)
T ss_pred             CCEEEEEeCCCcCcc-HH------HHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCC
Confidence            367777764432221 00      1111110            011122111000 00 01      135577777531 


Q ss_pred             CCcEEEEcCC-CCCC-CCC---HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccccCC--C
Q 009673          251 RPKLIIAGAS-AYPR-DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP--R  320 (529)
Q Consensus       251 ~pklIi~~~s-~~p~-~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~Gp--r  320 (529)
                      +..+||+..- +.+. ..+   +++++++|++||+++|+|++|. |+--.|.. . .-+. ..|+++  +.|.++|.  .
T Consensus       229 ~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~fa~e~~gv~PDiv~--~gKgl~gG~~P  305 (459)
T PRK06082        229 GIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPN-GMGRTGEWFTHQAYGIEPDILC--IGKGLGGGLVP  305 (459)
T ss_pred             CEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhhHhHhhCCCCCEEE--ecccccCCCCc
Confidence            3456666521 1112 233   8999999999999999999975 43111210 0 0011 368887  56999652  4


Q ss_pred             CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEe
Q 009673          321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLV  398 (529)
Q Consensus       321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~  398 (529)
                      .|.+++++      ++..........++.+++... .++..+.|+.+..+   +..+++.++.++|.+.|++.  .+.++
T Consensus       306 ~~av~~~~------~i~~~~~~~~~~~T~~gnpl~-~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i  375 (459)
T PRK06082        306 IAAMITKD------KYNTAAQISLGHYTHEKSPLG-CAAALATIEVIEQE---GLLEKVKADSQFMRERLLEMKAKYPLI  375 (459)
T ss_pred             ceEEEEcH------HHHhhccCCCCCCCCCcCHHH-HHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence            57777776      454333221111233443333 33333457665443   34666777777888877662  22222


Q ss_pred             cC--CCCCceEEEccCCC----CCc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHH
Q 009673          399 SG--GSDNHLVLVDLRPM----GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI  469 (529)
Q Consensus       399 ~~--gt~~~~~~v~~~~~----~i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~l  469 (529)
                      ..  |. .-+.-+.+...    .-+   ...+...+.+.||.+...         ....||+..| ++   ++++|++++
T Consensus       376 ~~vrG~-Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---------~~~~i~~~Pp-l~---it~~eid~~  441 (459)
T PRK06082        376 GDVRGI-GLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVS---------QGNVIQLSPP-LI---ITREELTQA  441 (459)
T ss_pred             eeeeec-cceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEec---------CCCEEEEeCC-Cc---cCHHHHHHH
Confidence            21  11 12223333211    001   234556667899988431         1357999754 43   569999999


Q ss_pred             HHHHHHHHHHH
Q 009673          470 ADFIHEGVEIT  480 (529)
Q Consensus       470 a~~i~~~~~~~  480 (529)
                      ++.+++++...
T Consensus       442 ~~~l~~~l~~~  452 (459)
T PRK06082        442 LAILEEAIAKI  452 (459)
T ss_pred             HHHHHHHHHHH
Confidence            99999998643

>PRK07678 aminotransferase; Validated

Probab=99.16  E-value=6.4e-08  Score=103.47  Aligned_cols=325  Identities=19%  Similarity=0.146  Sum_probs=166.1

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---  189 (529)
                      .-.|+|.+|+...+..- .  +... .+ .++.  .+  ...+++.++++...    .....+||++|+..++....   
T Consensus        63 h~~p~v~~ai~~q~~~~-~--~~~~-~~-~~~~--~~--~lae~l~~~~~~~~----~v~f~~sGseA~e~AlklAr~~t  129 (451)
T PRK07678         63 YGRKELAEAAYEQLKTL-S--YFPL-TQ-SHEP--AI--KLAEKLNEWLGGEY----VIFFSNSGSEANETAFKIARQYH  129 (451)
T ss_pred             CCCHHHHHHHHHHHHhc-C--cccc-cc-CCHH--HH--HHHHHHHHhCCCCC----EEEEeCCcHHHHHHHHHHHHHHH
Confidence            34688888888776532 1  1110 11 1221  22  23367777775432    12446899999998876431   


Q ss_pred             ----CCC-CEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccCC-CCC-----CCC---HHHH
Q 009673          190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDE-STG-----LVD---YDML  243 (529)
Q Consensus       190 ----~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~------------~~~~v~~~v~~-~~~-----~iD---~d~l  243 (529)
                          +|| .+|+...-.|-|... +      .+...+.            .+..++++... ..+     ..|   ++.+
T Consensus       130 ~~~g~~~r~~ii~~~~~yHG~t~-~------als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  202 (451)
T PRK07678        130 AQKGEPHRYKFISRYRAYHGNSM-G------ALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEI  202 (451)
T ss_pred             HhcCCCCCcEEEEECCCcCCccH-H------HhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHH
Confidence                134 578777654422210 0      0111110            01112211000 000     011   2335


Q ss_pred             HHHhhh---cCCcEEEEcCC--CCCCCC----CHHHHHHHHHHhCCEEEEecccc-ccccccc-ccCCCCC-cccEEEec
Q 009673          244 EKTAIL---FRPKLIIAGAS--AYPRDF----DYPRMRQIADAVGALLMMDMAHI-SGLVAAS-VVADPFK-YCDVVTTT  311 (529)
Q Consensus       244 e~~i~~---~~pklIi~~~s--~~p~~~----d~~~i~~ia~~~g~~livD~ah~-~Gli~~~-~~~~~~~-~aDiv~~S  311 (529)
                      ++.+..   .++.+||+..-  +.+...    -+++++++|++||+++|+|+.+. +|-...- .... +. ..|+++.+
T Consensus       203 ~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~-~gv~PDivt~g  281 (451)
T PRK07678        203 DRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMN-YGVKPDIITMA  281 (451)
T ss_pred             HHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHh-cCCCCCEEEee
Confidence            666642   24556777521  222222    38899999999999999999863 3332210 0111 11 36888764


Q ss_pred             ccccccC--CCCeEEEeeCCCcchhHHHhhhccc------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673          312 THKSLRG--PRGGMIFFKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC  383 (529)
Q Consensus       312 ~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a  383 (529)
                        |.|+|  ...|.+++++      ++.+.+...      ...++.+++.....+++ ++|+.+.+++   ..+++.+..
T Consensus       282 --K~lggG~~Pi~av~~~~------~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~-a~l~~l~~~~---~~~~~~~~g  349 (451)
T PRK07678        282 --KGITSAYLPLSATAVKK------EIYEAFKGKGEYEHFRHVNTFGGNPAACALAL-KNLEIMENEN---LIERSAQLG  349 (451)
T ss_pred             --cccccCCcceeEEEEcH------HHHHHHhccCcccccccCCCCCcCHHHHHHHH-HHHHHHHhCC---HHHHHHHHH
Confidence              99854  2567778877      566555421      11223344333333333 4677665433   455666667


Q ss_pred             HHHHHHHHhc--CcEEec--CCCCCceEEEccCCC-----CCc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEE
Q 009673          384 RALASRLVEL--GYKLVS--GGSDNHLVLVDLRPM-----GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRI  451 (529)
Q Consensus       384 ~~l~~~L~~~--G~~v~~--~gt~~~~~~v~~~~~-----~i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRi  451 (529)
                      ++|.+.|++.  ...++.  .|. ..+.-+.+...     ..+   ...+...|.+.||.+...   +...+.....|||
T Consensus       350 ~~l~~~l~~~~~~~~~v~~vrg~-Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~---g~~v~~~~~~lrl  425 (451)
T PRK07678        350 ELLLEQLKEELGEHPLVGDIRGK-GLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKN---GDTVAGYNNVLTL  425 (451)
T ss_pred             HHHHHHHHHHHhcCCCEEEEEee-ceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeec---CccccCCCCEEEE
Confidence            7777777541  122221  111 12222333210     001   234667778899998532   1100112357999


Q ss_pred             ccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          452 GSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       452 g~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +.+..    ++++|++++++.+.+++.
T Consensus       426 ~Ppl~----it~~eid~~~~~l~~~l~  448 (451)
T PRK07678        426 SPPLV----ISSEEIAFIVGTLKTALE  448 (451)
T ss_pred             ECCCc----CCHHHHHHHHHHHHHHHH
Confidence            86643    568999999999998885

>PRK06149 hypothetical protein; Provisional

Probab=99.15  E-value=3.3e-08  Score=115.00  Aligned_cols=327  Identities=14%  Similarity=0.074  Sum_probs=166.6

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHH---hhcC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT---AILK  190 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~---all~  190 (529)
                      -.|+|.+|+...+..- ..   ..++.  ++...++    .+++++++.-..+   .....+||++||..++.   +..+
T Consensus       600 ~hp~v~~Ai~~q~~~l-~~---~~~~~--~~~~~el----ae~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~tg  666 (972)
T PRK06149        600 GHPRLAAAAARQWSLL-NT---NSRFH--YAAVAEF----SERLAALAPDGLD---TVFLVNSGSEANDLAIRLAWAASG  666 (972)
T ss_pred             CCHHHHHHHHHHHHhc-cc---ccccc--CHHHHHH----HHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHhcC
Confidence            4799999998776432 11   12221  2222222    2667777732111   23456899999999887   3333


Q ss_pred             CCCEEEEcCCC-CCccccc----ccccccccc--ccccceEEEEEcccC-CCCC-CCC-----HHHHHHHhhh-----cC
Q 009673          191 PHDRIMGLDLP-HGGHLSH----GFMTPKRRV--SGTSIYFESMPYRLD-ESTG-LVD-----YDMLEKTAIL-----FR  251 (529)
Q Consensus       191 pGD~Vl~~~~~-~~g~~s~----g~~~~~~~i--~~~g~~~~~v~~~v~-~~~~-~iD-----~d~le~~i~~-----~~  251 (529)
                       ..+|+..+-. ||-++..    +........  ...+ ++..++++-. ...+ ..|     .+++++.++.     .+
T Consensus       667 -r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~-~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  744 (972)
T PRK06149        667 -RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPD-WVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRG  744 (972)
T ss_pred             -CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCC-CeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCc
Confidence             3466666544 3322110    000000000  0000 1122221100 0001 011     2444444321     13


Q ss_pred             CcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEeccc-ccccccccccC-CCCC-cccEEEecccccccC-CCC
Q 009673          252 PKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAH-ISGLVAASVVA-DPFK-YCDVVTTTTHKSLRG-PRG  321 (529)
Q Consensus       252 pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah-~~Gli~~~~~~-~~~~-~aDiv~~S~hK~l~G-prg  321 (529)
                      +.+||+..  .+.+...+    +++++++|++||+++|+|++| .+|-....... .-+. ..|++++  .|.++| ...
T Consensus       745 iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~--gK~lg~G~Pl  822 (972)
T PRK06149        745 LAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITM--AKGMGNGHPL  822 (972)
T ss_pred             eEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEe--cccccCCeee
Confidence            45666652  22233444    899999999999999999997 34433210000 0011 3688855  599854 345


Q ss_pred             eEEEeeCCCcchhHHHhhhcc-cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEe
Q 009673          322 GMIFFKKDPVLGVELESAINN-AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLV  398 (529)
Q Consensus       322 G~i~~~~~~~~~~~l~~~i~~-~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~  398 (529)
                      |++++++      ++.+.+.. ..+....++......+++ +.|+.+.++   +..+++.+..++|.+.|++.  .+.++
T Consensus       823 ~av~~~~------~i~~~~~~~~~~~sT~~gnP~~~aaal-a~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i  892 (972)
T PRK06149        823 GAVITRR------EIAEALEAEGYFFSSTGGSPVSCRIGM-AVLDVLREE---KLQENARRVGDHLKARLEALADRHPLI  892 (972)
T ss_pred             EEEEEcH------HHHhhhccCCcccCCCCCCHHHHHHHH-HHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence            8888887      67666543 222222344344334444 357766543   34555555667777777652  12222


Q ss_pred             cC--CCCCceEEEccCCC----CCc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHH
Q 009673          399 SG--GSDNHLVLVDLRPM----GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI  469 (529)
Q Consensus       399 ~~--gt~~~~~~v~~~~~----~i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~l  469 (529)
                      ..  |. .-+.-+.+...    .-+   ...+.+.|.+.||.+...   |    .....|||. |.++   ++++|++++
T Consensus       893 ~~vrG~-Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~---g----~~~~vl~~~-Ppl~---it~~~id~~  960 (972)
T PRK06149        893 GAVHGM-GLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPT---G----DHLNILKIK-PPLC---LDRESADFF  960 (972)
T ss_pred             EEEeec-ceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeec---C----CCCCEEEEE-CCCc---CCHHHHHHH
Confidence            21  11 12222333110    011   234667778899998532   1    113579986 4444   679999999


Q ss_pred             HHHHHHHHHH
Q 009673          470 ADFIHEGVEI  479 (529)
Q Consensus       470 a~~i~~~~~~  479 (529)
                      ++.+.+++..
T Consensus       961 ~~~l~~~l~~  970 (972)
T PRK06149        961 VDMLDRVLTE  970 (972)
T ss_pred             HHHHHHHHHh
Confidence            9999998863

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=99.15  E-value=3.2e-09  Score=102.37  Aligned_cols=227  Identities=22%  Similarity=0.264  Sum_probs=142.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCC-CCcccc--cccccc-cccccccc
Q 009673          146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP-HGGHLS--HGFMTP-KRRVSGTS  221 (529)
Q Consensus       146 ~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~-~~g~~s--~g~~~~-~~~i~~~g  221 (529)
                      .|.||    +-+++.||.+..-  |.+|..||+.|+..++.++++|||+.|...-. |.. +-  -|.... ...+.-.|
T Consensus        67 RdtLe----~vyA~vf~aE~a~--VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDT-LeevIG~rg~~~gSL~dfg  139 (416)
T COG4100          67 RDTLE----RVYAQVFGAEAAL--VRPQIISGTHAIACALFGILRPGDELLYITGSPYDT-LEEVIGLRGEGQGSLKDFG  139 (416)
T ss_pred             hhHHH----HHHHHHhccccce--eeeeeecchhHHHHHHHhccCCCCeEEEecCCcchh-HHHHhccCCCCcccHHHhC
Confidence            35566    5688999999763  67888999999999999999999999875411 100 00  000000 00111123


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC-CCC---C--CCCHHHHHHHHHHh--CCEEEEecccccccc
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS-AYP---R--DFDYPRMRQIADAV--GALLMMDMAHISGLV  293 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s-~~p---~--~~d~~~i~~ia~~~--g~~livD~ah~~Gli  293 (529)
                      ..++.++  +. .++.+|++.+...+++ ++|+|.+.-| .|.   .  +.+++++.++.|+.  |+++++|.++. .++
T Consensus       140 i~Y~~v~--Lt-~~gkiD~~~v~~~i~~-~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYG-EFv  214 (416)
T COG4100         140 IKYKAVP--LT-ADGKIDIQAVKTAISD-RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYG-EFV  214 (416)
T ss_pred             cceeecc--cc-cCCcccHHHHHHhcCc-cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccch-hhh
Confidence            3334333  43 3589999999999998 9999988632 333   2  44677777777765  68999999843 222


Q ss_pred             cccccCCCCC-cccEEEecccccccCC---CCeEEEeeCCCcchhHHHhhhc-ccccCCCCCCChHHHHHHHHHHHHHhc
Q 009673          294 AASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAIN-NAVFPGLQGGPHNHTIGGLAVCLKHAQ  368 (529)
Q Consensus       294 ~~~~~~~~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~-~~~~p~~~g~p~~~~iaala~al~~~~  368 (529)
                      -   ...|.. ++|++.+|+-|.-.|.   -||+|.+++      ++.+.-. +...|++. ...-..+.    +++++-
T Consensus       215 E---~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~------~~ve~~~yRlTaPGIG-~e~Gat~~----~l~~my  280 (416)
T COG4100         215 E---EKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKA------ELVEAAAYRLTAPGIG-REGGATLY----SLREMY  280 (416)
T ss_pred             h---ccCccccchhhhccceeeCCCCceeeccceeechH------HHHHhhceeeecCCcc-ccccccHH----HHHHHH
Confidence            1   123444 8999999999986442   468999988      6766532 23346652 11111122    222222


Q ss_pred             CchH---HHHHHHHHHHHHHHHHHHHhcCcEEec
Q 009673          369 SPEF---KVYQNKVVSNCRALASRLVELGYKLVS  399 (529)
Q Consensus       369 ~~~~---~~~~~~i~~~a~~l~~~L~~~G~~v~~  399 (529)
                       +++   .....+..+-+......|.+.|+++.+
T Consensus       281 -qGlFlAPhvv~qa~Kga~fta~~le~lg~~~~P  313 (416)
T COG4100         281 -QGLFLAPHVVSQAVKGAHFTARFLEKLGFPVNP  313 (416)
T ss_pred             -hhhccchHHHHHHhhhhHHHHHHHHHcCCCCCC
Confidence             222   455666677777777778888998765

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=99.15  E-value=2.7e-08  Score=106.14  Aligned_cols=203  Identities=15%  Similarity=0.138  Sum_probs=115.9

Q ss_pred             CCcEEEEcC-CCCCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccc-cCCC
Q 009673          251 RPKLIIAGA-SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSL-RGPR  320 (529)
Q Consensus       251 ~pklIi~~~-s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l-~Gpr  320 (529)
                      +..+|++.. .++++     ..-+++++++|++||+++|+|+.+ .|+-..+.. . .-+. ..|+++  +.|.+ .|.+
T Consensus       206 ~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~-tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~~G~P  282 (442)
T TIGR00709       206 KPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQ-AGFGRSGTMFAFEHAGIEPDFVV--MSKAVGGGLP  282 (442)
T ss_pred             ceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCCCCchhHHHHcCCCCcEEE--EcccccCCcc
Confidence            455666652 33333     224889999999999999999985 344222211 0 0011 368888  46998 4567


Q ss_pred             CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEe
Q 009673          321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLV  398 (529)
Q Consensus       321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~  398 (529)
                      .|++++++      ++ +.+.......+.++.... .++..++|+.+.+.+   ..+++.++.++|.+.|++.  .+.++
T Consensus       283 igav~~~~------~~-~~~~~~~~~~T~~gnpla-~aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v  351 (442)
T TIGR00709       283 LAVLLIAP------EF-DAWQPAGHTGTFRGNQLA-MVTGTEALNYWKDDN---LAQNAQERGERITSFLDDMIKEHPCI  351 (442)
T ss_pred             cEEEEEch------HH-hccCCCcCCCCCCcCHHH-HHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence            78888877      53 333222222333443333 333334676655433   4556666777777777652  23322


Q ss_pred             cC--CCCCceEEEccCCCC----------Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCH
Q 009673          399 SG--GSDNHLVLVDLRPMG----------ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSE  463 (529)
Q Consensus       399 ~~--gt~~~~~~v~~~~~~----------i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~  463 (529)
                      ..  | ..-+.-+.+....          .+   ...+...+.+.||.+...   +    .....||+..| ++   +++
T Consensus       352 ~~vrG-~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---~----~~~~~l~~~Pp-l~---it~  419 (442)
T TIGR00709       352 GNVRG-RGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETG---G----REGEVFRLLCP-IT---IDQ  419 (442)
T ss_pred             eeeec-cceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeec---C----CCCCEEEEECC-CC---CCH
Confidence            21  1 1122223332110          01   234666677899998431   1    12357898644 44   679


Q ss_pred             HHHHHHHHHHHHHHHH
Q 009673          464 KEFVAIADFIHEGVEI  479 (529)
Q Consensus       464 ~d~~~la~~i~~~~~~  479 (529)
                      +|++++++++.+++..
T Consensus       420 ~ei~~~~~~l~~~l~~  435 (442)
T TIGR00709       420 EECEEGISRFKQAVEE  435 (442)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999999864

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>PRK05965 hypothetical protein; Provisional

Probab=99.14  E-value=4.5e-08  Score=104.80  Aligned_cols=329  Identities=14%  Similarity=0.073  Sum_probs=167.1

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----  189 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all----  189 (529)
                      -.|+|.+|+...+.+ ......  .+...++   ...+ ..+++.+++..+.+   .....+|||+|+.+++....    
T Consensus        63 ~~p~i~~Ai~~q~~~-~~~~~~--~~~~~~~---~~~~-lae~L~~~~p~~~~---~v~f~~sGSEAve~AlKlAr~~~~  132 (459)
T PRK05965         63 GQESIVEAAAEQMRE-LPYATG--YFHFGSE---PAIR-LAAKLAERAPGSLN---HVYFTLGGSDAVDSAVRFIRHYWN  132 (459)
T ss_pred             CCHHHHHHHHHHHHh-cCCccc--ccccCCH---HHHH-HHHHHHhhCCCCcC---EEEEeCChhHHHHHHHHHHHHHHH
Confidence            478899998887753 211000  0000111   1122 33666676642222   12445789999998876431    


Q ss_pred             ---CCC-CEEEEcCCCCCccccc-----cccccccccccccceEEEEEcccCC-CCCCCC--------HHHHHHHhhhc-
Q 009673          190 ---KPH-DRIMGLDLPHGGHLSH-----GFMTPKRRVSGTSIYFESMPYRLDE-STGLVD--------YDMLEKTAILF-  250 (529)
Q Consensus       190 ---~pG-D~Vl~~~~~~~g~~s~-----g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD--------~d~le~~i~~~-  250 (529)
                         ++| .+|+...-.|-|.-..     +...+.......-.+...++++... ....-|        ++++++.+... 
T Consensus       133 ~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~  212 (459)
T PRK05965        133 ATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELG  212 (459)
T ss_pred             hcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcC
Confidence               133 5788777654222100     0000000000000001122222100 001123        25677777532 


Q ss_pred             --CCcEEEEcCC-CC-CC----CCCHHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEEEecccccccCC
Q 009673          251 --RPKLIIAGAS-AY-PR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLRGP  319 (529)
Q Consensus       251 --~pklIi~~~s-~~-p~----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv~~S~hK~l~Gp  319 (529)
                        +..+||+..- .. +.    ..-+++++++|++||+++|+|+.+. |+--.|..  ..-+. ..|+++.+  |.|+|.
T Consensus       213 ~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG  289 (459)
T PRK05965        213 ADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVIT-GFGRTGPLFACEAEGVVPDLMTVA--KGLTSG  289 (459)
T ss_pred             CCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-cCccCchhhhHhhcCCCCCeEEec--hhhccC
Confidence              3456676521 11 11    2237899999999999999999853 33111110  00011 36899876  998553


Q ss_pred             --CCeEEEeeCCCcchhHHHhhhccc-------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 009673          320 --RGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL  390 (529)
Q Consensus       320 --rgG~i~~~~~~~~~~~l~~~i~~~-------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L  390 (529)
                        ..|.+++++      ++.+.+...       ...++.++......+++ +.|+.+.++   +..+++.+..++|.+.|
T Consensus       290 ~~Pi~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~-a~L~~l~~~---~l~~~~~~~g~~l~~~l  359 (459)
T PRK05965        290 YVPMGAVLMSD------HVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGL-EVLRLYHEG---GLLANGQKAGPRFAAGL  359 (459)
T ss_pred             CcceeEEEEcH------HHHHHHhccccccccccccCCCCCCHHHHHHHH-HHHHHHHhc---cHHHHHHHHHHHHHHHH
Confidence              567778877      566555321       11223334333333333 357766543   34556666677777777


Q ss_pred             Hhc-CcEEecC--CCCCceEEEccCCC-----C--Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCc
Q 009673          391 VEL-GYKLVSG--GSDNHLVLVDLRPM-----G--ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMT  457 (529)
Q Consensus       391 ~~~-G~~v~~~--gt~~~~~~v~~~~~-----~--i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~t  457 (529)
                      ++. .+.++..  |. ..+.-+.+...     .  .+   ...+.+.+.+.||.+...         +...||+.-| ++
T Consensus       360 ~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~---------g~~~i~~~Pp-L~  428 (459)
T PRK05965        360 DALRAHPLVGDVRGR-GLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAF---------GDGVLGFAPA-LC  428 (459)
T ss_pred             HhhccCCCEEEEeec-ceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEec---------CCcEEEEECC-Cc
Confidence            662 1222221  11 12222333210     0  01   234666777899998421         2356898744 44


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHH
Q 009673          458 TRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       458 t~g~~~~d~~~la~~i~~~~~~  479 (529)
                         ++++|++++++.+.+++..
T Consensus       429 ---it~~ei~~~~~~l~~~l~~  447 (459)
T PRK05965        429 ---CTEGEFDLIFERTRKTLDD  447 (459)
T ss_pred             ---CCHHHHHHHHHHHHHHHHH
Confidence               6799999999999999974

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=99.14  E-value=5.4e-09  Score=104.30  Aligned_cols=333  Identities=13%  Similarity=0.134  Sum_probs=189.3

Q ss_pred             ceeEecCCCCCcHHHHHHHhhhhhccCCCCCC-CCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673          104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF  182 (529)
Q Consensus       104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p-~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~  182 (529)
                      ..++.+++.-+|++|++.....+.+-...|+. ..+...+.++...++ .+++.+.++++++.+ +.+.+...+++.+..
T Consensus         6 ~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~-~a~~~lreLl~iPd~-Y~VlflqGGat~qf~   83 (365)
T COG1932           6 VYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLE-EAEKDLRELLNIPDD-YKVLFLQGGATGQFA   83 (365)
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHH-HHHHHHHHHhCCCCC-ceEEEEcCccHHHHH
Confidence            35666777778999999988777654443432 122222334444444 466899999999975 334444455557788


Q ss_pred             HHHHhhcCCCCE--EEEcCCCCCccccccccccccccccccceEEEEEcc-cCC-CCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          183 EVYTAILKPHDR--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR-LDE-STGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       183 ~~l~all~pGD~--Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~-v~~-~~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      ++.+.|+..+..  |......   ..+..      .+...+....+.... ... -...+|++...  +.+ +...|..+
T Consensus        84 ~~p~nLl~~~~~~yv~~g~Ws---~~a~~------eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~-~~ayv~~~  151 (365)
T COG1932          84 MAPMNLLGKRGTDYVDTGAWS---EFAIK------EAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSD-NDAYVHFC  151 (365)
T ss_pred             HHHHhhhcccCceeEeeeehh---HhHHH------HHHHhcccccccccceeccCccCCCChhhcc--cCC-CccEEEEe
Confidence            888898866543  4433211   11101      111111100110000 000 11344555432  222 22225444


Q ss_pred             CCC--CCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhH
Q 009673          259 ASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVE  335 (529)
Q Consensus       259 ~s~--~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~  335 (529)
                      +.+  .+..++  ..-.+..  +.++++|++.  ++...   +.++..-|++.++.+|.+ ||-| ++++.++      +
T Consensus       152 ~NeTi~Gv~v~--~~p~~~~--~~~~v~D~SS--~ilsr---~iDvsk~dviyagaQKnl-GpaGltvvIvr~------~  215 (365)
T COG1932         152 WNETISGVEVP--ELPDIGS--DGLLVADASS--AILSR---PIDVSKYDVIYAGAQKNL-GPAGLTVVIVRP------D  215 (365)
T ss_pred             cCCcccceEcc--CCCCCCC--CceEEEeccc--HHhcC---CCChhHcceEEEehhhcc-CccceEEEEEcH------H
Confidence            222  222222  1111111  2899999863  32211   222335689999999998 7777 8999988      5


Q ss_pred             HHhhhcccccC------------CCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHhcCcEEe--cC
Q 009673          336 LESAINNAVFP------------GLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLV--SG  400 (529)
Q Consensus       336 l~~~i~~~~~p------------~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~~G~~v~--~~  400 (529)
                      +.+++.....|            .+..+|....+.-+..+|+.+...+ .+...++-.++++.|.+.+.+.+|-..  .+
T Consensus       216 ~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~  295 (365)
T COG1932         216 LLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAK  295 (365)
T ss_pred             HHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccch
Confidence            66655443122            1245777777777777788776555 588889999999999999988765321  22


Q ss_pred             CCCCce-EEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          401 GSDNHL-VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       401 gt~~~~-~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ...+.+ +.+++....++ ..+.+.++++|+...++    +.   ..+|+|++.-  +  .+..++++.|+++++.+..
T Consensus       296 ~~RS~mnV~f~~~~~~ld-~~fv~eae~~gl~~lkG----hr---~vgGmRasiy--n--A~~~e~veaL~~fm~~f~~  362 (365)
T COG1932         296 ANRSRMNVTFTLVDAELD-KGFVAEAEAAGLIYLKG----HR---SVGGLRASIY--N--AVPLEDVEALTDFMDWFEE  362 (365)
T ss_pred             hhccceeEEEEcCcHHHH-HHHHHHHHHcCCceecc----cc---CCCceeeeee--c--CCCHHHHHHHHHHHHHHHH
Confidence            222333 34455444444 33455566777776443    32   3578999863  2  2678999999999988765

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.14  E-value=5e-08  Score=103.37  Aligned_cols=208  Identities=13%  Similarity=0.062  Sum_probs=123.5

Q ss_pred             HHHHHHhhhcCCcEEEEcCC--CCC-----CCCCHHHHHHHHHHhCCEEEEeccccccccccccc-CC-CCC-cccEEEe
Q 009673          241 DMLEKTAILFRPKLIIAGAS--AYP-----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-AD-PFK-YCDVVTT  310 (529)
Q Consensus       241 d~le~~i~~~~pklIi~~~s--~~p-----~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~-~~~-~aDiv~~  310 (529)
                      +.+++.+.+ +..+||+..-  ..+     ....+++++++|++||+++|+|++| .|+--.|.. .. -.. ..|+++ 
T Consensus       191 ~~~~~~~~~-~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDi~t-  267 (422)
T PRK05630        191 RSLELLIDE-TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIA-TGFGRTGELFATLAAGVTPDIMC-  267 (422)
T ss_pred             HHHHHHHhh-ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecce-eCCCcCchhhHHHhcCCCCCeee-
Confidence            345555544 6777777641  222     1335889999999999999999997 554212210 00 011 357885 


Q ss_pred             cccccccC--CCCeEEEeeCCCcchhHHHhhhccc------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 009673          311 TTHKSLRG--PRGGMIFFKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN  382 (529)
Q Consensus       311 S~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~  382 (529)
                       +.|.++|  +.+|++++++      ++.+.+...      ....+.++ +...+++...+|+.+.+.+   ..+++.++
T Consensus       268 -~gK~l~gG~~p~~av~~~~------~i~~~~~~~~~~~~~~h~~T~~g-~Pla~aaa~aaL~~l~~~~---~~~~~~~~  336 (422)
T PRK05630        268 -VGKALTGGFMSFAATLCTD------KVAQLISTPNGGGALMHGPTFMA-NPLACAVAHASLEIIETGM---WRKQVKRI  336 (422)
T ss_pred             -eechhhcCccccceeeccH------HHHHHHhccCCCCccccCCCCcC-CHHHHHHHHHHHHHHHhCc---HHHHHHHH
Confidence             4699955  5788888887      566655321      11122333 3334444445677765433   34566666


Q ss_pred             HHHHHHHHHhc-CcEEecC--CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccC
Q 009673          383 CRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTR  459 (529)
Q Consensus       383 a~~l~~~L~~~-G~~v~~~--gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~  459 (529)
                      .++|.+.|++. ....+.+  | ...+.-+.+... .+...+.+.|.+.||.+...          ...+|+. |.++  
T Consensus       337 g~~l~~~L~~l~~~~~v~~vRg-~Gl~~~ie~~~~-~~~~~~~~~~~~~Gl~~~~~----------g~~l~~~-PpL~--  401 (422)
T PRK05630        337 EAELIAGLSPLAHLPGVADVRV-LGAIGVVEMEQP-VDMEEATQAAVDHGVWLRPF----------GRLVYVM-PPYI--  401 (422)
T ss_pred             HHHHHHHHHHhhcCCCeeeeec-cccEEEEEECCc-ccHHHHHHHHHHCCeEEEec----------CCEEEEE-CCcc--
Confidence            77777777642 1222221  1 123344444321 13456777888899998421          2468986 4455  


Q ss_pred             CCCHHHHHHHHHHHHHHHH
Q 009673          460 GFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       460 g~~~~d~~~la~~i~~~~~  478 (529)
                       ++++|++++.+.+++++.
T Consensus       402 -it~~~i~~~~~~l~~al~  419 (422)
T PRK05630        402 -TTSEQIAQICAALAAAVK  419 (422)
T ss_pred             -CCHHHHHHHHHHHHHHHh
Confidence             679999999999999886

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=99.13  E-value=4e-08  Score=104.51  Aligned_cols=310  Identities=15%  Similarity=0.131  Sum_probs=162.2

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCC
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP  191 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~p  191 (529)
                      .-.|.|.+|+...+.....        +. .....+++  ..+++.+++... +   .....+||++|+..++... .-.
T Consensus        64 h~~p~v~~Ai~~q~~~~~~--------~~-~~~~~~~~--la~~l~~~~p~~-~---~v~f~~sGseA~e~AlklAr~~t  128 (431)
T PRK06209         64 HAYPPVVEAVREALQDGCN--------FT-RPSAIELD--AAESFLELIDGA-D---MVKFCKNGSDATSAAVRLARAYT  128 (431)
T ss_pred             CCCHHHHHHHHHHHHhCcC--------CC-CCCHHHHH--HHHHHHHhCCcc-c---eEEEecCHHHHHHHHHHHHHHHh
Confidence            3478888888877753221        11 11112222  236677766321 1   1245689999999888743 223


Q ss_pred             CC-EEEEcC--CCCCcc-ccccccccccccccccce----EEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEcC--
Q 009673          192 HD-RIMGLD--LPHGGH-LSHGFMTPKRRVSGTSIY----FESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGA--  259 (529)
Q Consensus       192 GD-~Vl~~~--~~~~g~-~s~g~~~~~~~i~~~g~~----~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~~~--  259 (529)
                      |. +|+...  .-|+.+ ..|+..    .. ..+..    ..+..++      .-|++++++.++..  +..+|++..  
T Consensus       129 gr~~i~~~~~~~~h~~~~~~~g~~----~~-~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~~~~~~aavi~Epv~  197 (431)
T PRK06209        129 GRDLVARCADHPFFSTDDWFIGTT----PM-SAGIPASVSALTVTFR------YNDIASLEALFEDHPGRIACVILEPAT  197 (431)
T ss_pred             CCCeEEEeccCccccccccccccC----CC-CCCCChhHhccccccC------CCCHHHHHHHHHhCCCCEEEEEEcccc
Confidence            43 455441  111101 011110    00 00100    0111111      23789999888642  345666642  


Q ss_pred             CCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccc-cCCCCC-cccEEEecccccccC-CCCeEEEeeCCCcchhHH
Q 009673          260 SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVLGVEL  336 (529)
Q Consensus       260 s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~~~-~aDiv~~S~hK~l~G-prgG~i~~~~~~~~~~~l  336 (529)
                      +..|....+++|+++|++||+++|+|++| .|+...+. ...-+. ..|+++  +.|.++| ..+|++++++      ++
T Consensus       198 g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~~~~~~g~~~~~gv~PDi~t--~gK~lggG~p~~av~~~~------~i  268 (431)
T PRK06209        198 ADEPQDGFLHEVRRLCHENGALFILDEMI-TGFRWHMRGAQKLYGIVPDLSC--FGKALGNGFAVSALAGKR------EY  268 (431)
T ss_pred             CCCCCHHHHHHHHHHHHHcCCEEEEEccc-ccCCcCcchhhHHhCCCcceee--ehhhhcCCcccEEEEEHH------HH
Confidence            12222445899999999999999999998 66532210 000011 357755  4699954 4578888887      56


Q ss_pred             Hhh--hcc---c-cc-CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cCcEEe-c-CCCC
Q 009673          337 ESA--INN---A-VF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLV-S-GGSD  403 (529)
Q Consensus       337 ~~~--i~~---~-~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~~v~-~-~gt~  403 (529)
                      .+.  +..   . .+ .+..-+++...+++..++|+.+.+++   ..+++.++.+++.+.|++    .++... . .|..
T Consensus       269 ~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~  345 (431)
T PRK06209        269 MELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDED---VIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRP  345 (431)
T ss_pred             HhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecce
Confidence            554  211   1 11 11122234445555555787775543   456666667777777755    343321 1 1221


Q ss_pred             CceEEEccCCCCCcH----HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          404 NHLVLVDLRPMGIDG----ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       404 ~~~~~v~~~~~~i~~----~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      ..+.++...+.+...    ..+.+.|.+.||.+     |    +     ++|+.      .++++|++++.+.+.+++..
T Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~-----p----~-----l~is~------~ht~~dId~~l~~l~~~l~~  405 (431)
T PRK06209        346 CCLTYSTLDGNGQPSQAFRTLFLQETIRRGVLM-----P----S-----LVVSY------AHGDADIERTIDAVHGALGV  405 (431)
T ss_pred             EEEEEecCCcccCCcHHHHHHHHHHHHHCCccc-----c----c-----ccccc------cCCHHHHHHHHHHHHHHHHH
Confidence            112222111111111    23556677789975     1    1     34441      36799999999999999876


Q ss_pred             H
Q 009673          480 T  480 (529)
Q Consensus       480 ~  480 (529)
                      .
T Consensus       406 ~  406 (431)
T PRK06209        406 Y  406 (431)
T ss_pred             H
Confidence            5

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.13  E-value=8.9e-08  Score=101.79  Aligned_cols=307  Identities=14%  Similarity=0.101  Sum_probs=161.7

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCC-
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP-  191 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~p-  191 (529)
                      -.|.|.+|+...+......++       .++.  .+  ...+++.+.+.- .+.   ....+||++|+..++... .-. 
T Consensus        70 ~~p~v~~ai~~q~~~~~~~~~-------~~~~--~~--~la~~l~~~~p~-~~~---v~f~~sGseA~e~AlklAr~~tg  134 (428)
T PRK12389         70 AHPHITKAITEAAENGVLYGT-------PTEL--EI--EFAKMLKEAIPS-LEK---VRFVNSGTEAVMTTIRVARAYTG  134 (428)
T ss_pred             CCHHHHHHHHHHHHhCCccCC-------CCHH--HH--HHHHHHHHhCCC-CcE---EEEeCCHHHHHHHHHHHHHHhhC
Confidence            478888888877753211111       1221  22  233566666541 221   244689999999888643 223 


Q ss_pred             CCEEEEcCCCCCccccccccccccccccccce-----------E------EEEEcccCCCCCCCCHHHHHHHhhhc--CC
Q 009673          192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----------F------ESMPYRLDESTGLVDYDMLEKTAILF--RP  252 (529)
Q Consensus       192 GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-----------~------~~v~~~v~~~~~~iD~d~le~~i~~~--~p  252 (529)
                      ..+|+...-.|-|... +      .+...+..           +      ....++      ..|++.+++.+..+  ++
T Consensus       135 r~~ii~~~~~yHG~t~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~~~~~v  201 (428)
T PRK12389        135 RTKIIKFAGCYHGHSD-L------VLVAAGSGPSTLGTPDSAGVPKSIAQEVITVP------FNDIEALKEALDKWGDEV  201 (428)
T ss_pred             CCEEEEECCCcCCChH-H------HHHhcCCcccccCCCCCCCCCCcccCceEEcC------CCCHHHHHHHHHhcCCcE
Confidence            3577776654322210 0      01111100           0      011111      23789998888643  34


Q ss_pred             cEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEecccccccccc-cccCCCCC-cccEEEecccccccC-CCCeE
Q 009673          253 KLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAA-SVVADPFK-YCDVVTTTTHKSLRG-PRGGM  323 (529)
Q Consensus       253 klIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~-~~~~~~~~-~aDiv~~S~hK~l~G-prgG~  323 (529)
                      .+|++..  .+.+...+    +++|+++|++||+++|+|++|. |+-.. +....-+. ..|+++.  .|.++| ...|.
T Consensus       202 aavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G~Rt~~~~a~~~~gv~PDivt~--gK~lggG~Pi~a  278 (428)
T PRK12389        202 AAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVIT-AFRFMYGGAQDLLGVEPDLTAL--GKIIGGGLPIGA  278 (428)
T ss_pred             EEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccc-ccccCcchhhHHhCCCCCeeee--chhhcCCCceeE
Confidence            5666652  22222444    8999999999999999999975 33110 10000011 3688754  599854 44566


Q ss_pred             EEeeCCCcchhHHHhhhcc--cc-cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cCcE
Q 009673          324 IFFKKDPVLGVELESAINN--AV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYK  396 (529)
Q Consensus       324 i~~~~~~~~~~~l~~~i~~--~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~~  396 (529)
                      +++++      ++.+.+..  .. ..++.++... ..++..++|+.+.++   +..+++.++.++|.+.|++    .++.
T Consensus       279 v~~~~------~i~~~~~~~~~~~~~~T~~gnpl-~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~  348 (428)
T PRK12389        279 YGGRK------DIMEQVAPLGPAYQAGTMAGNPA-SMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAEKHGIT  348 (428)
T ss_pred             EeEHH------HHHhhhccCCCcccccCCccCHH-HHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            67777      67666642  11 1122333333 343333467766543   3456677777788877765    3432


Q ss_pred             Ee-cCCCCCceEEEccCCCCC---------c---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCH
Q 009673          397 LV-SGGSDNHLVLVDLRPMGI---------D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSE  463 (529)
Q Consensus       397 v~-~~gt~~~~~~v~~~~~~i---------~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~  463 (529)
                      .. ..+. . +.-+.+.....         +   ...+.+.|.++||.+...   +      ...+.+   .+   -+++
T Consensus       349 ~~v~r~~-g-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---~------~~~~~~---~l---~~t~  411 (428)
T PRK12389        349 ITINRLK-G-ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPS---K------YEAWFL---TT---AHTE  411 (428)
T ss_pred             EEEEecC-c-EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecC---C------CCCeee---cC---CCCH
Confidence            21 1111 1 22222211100         1   234667777899998532   1      111222   22   2679


Q ss_pred             HHHHHHHHHHHHHHH
Q 009673          464 KEFVAIADFIHEGVE  478 (529)
Q Consensus       464 ~d~~~la~~i~~~~~  478 (529)
                      +|++++.+.+.+++.
T Consensus       412 e~id~~~~~l~~~l~  426 (428)
T PRK12389        412 EDIEETLEAVDRAFA  426 (428)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999998875

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=99.11  E-value=8e-08  Score=97.52  Aligned_cols=285  Identities=17%  Similarity=0.104  Sum_probs=167.3

Q ss_pred             HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhh---cCCCCEEEEcCCCCCccccccccccccccccccceEEEEE
Q 009673          153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP  228 (529)
Q Consensus       153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~al---l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~  228 (529)
                      -+..+++++|++..    |-...-+. .+-.++.++.   -++..+++++.-.|+-++.--      .....+.+++++.
T Consensus       125 fQtlv~dLTGm~VA----NASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl------~Tra~~~g~~i~~  194 (450)
T COG0403         125 FQTLVADLTGLDVA----NASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVL------RTRAEGLGIEIEV  194 (450)
T ss_pred             HHHHHHHHhCCCcc----cchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHH------HhhcccCceEEEE
Confidence            35778899999863    33334444 4444444554   234689998876665443211      1122344456666


Q ss_pred             cccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cc
Q 009673          229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YC  305 (529)
Q Consensus       229 ~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~a  305 (529)
                      ++.+      |.+++++. .+..+..+++.+|+.-+  ..|+++|.++++++|+++++=    +..+..+....|-+ ++
T Consensus       195 ~~~~------d~~~l~~~-~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~----aDplaL~LL~pPGe~GA  263 (450)
T COG0403         195 VDAD------DLDDLESA-DDGDVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVA----ADPLALGLLKPPGEFGA  263 (450)
T ss_pred             eccc------hhhhhhhc-cccCeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEE----echhHhhccCCccccCC
Confidence            5443      77888877 44367788888888655  557999999999999988763    22233333344555 89


Q ss_pred             cEEEecccc-----cccCCCCeEEEeeCCC-----c-----------------chhHHHhhhcccccCCCCCCChHHHHH
Q 009673          306 DVVTTTTHK-----SLRGPRGGMIFFKKDP-----V-----------------LGVELESAINNAVFPGLQGGPHNHTIG  358 (529)
Q Consensus       306 Div~~S~hK-----~l~GprgG~i~~~~~~-----~-----------------~~~~l~~~i~~~~~p~~~g~p~~~~ia  358 (529)
                      ||++++++-     +|+||..|+..++++.     +                 .+..-++.|++-.-....+  .+..+.
T Consensus       264 DIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNIC--TnQaLl  341 (450)
T COG0403         264 DIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNIC--TNQALL  341 (450)
T ss_pred             ceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhh--HHHHHH
Confidence            999999996     3688999999998741     0                 0011122232211111011  122333


Q ss_pred             HHHHH--HHHhcCchHHHHHHHHHHHHHHHHHHHHh--cCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcC
Q 009673          359 GLAVC--LKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNK  434 (529)
Q Consensus       359 ala~a--l~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~  434 (529)
                      |++++  +-.....++++..+++.+.+.+++++|++  .|++++.+   .++-.+.++........+.+.....||-+..
T Consensus       342 A~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~---~fFdt~~v~~~~~~~~~l~~~~~~~G~~L~~  418 (450)
T COG0403         342 ALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD---HFFDTFTVRVPEEVAEALLAAAIAGGINLRR  418 (450)
T ss_pred             HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc---cceeeEEEecchhHHHHHHHHHHhcCCceee
Confidence            44333  23444567899999999999999999996  56888753   2332222321111123334444456766543


Q ss_pred             CCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          435 NSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       435 ~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      -         .+..+=|+....+    +++|++.+++.+...
T Consensus       419 ~---------~~~~~~ia~tEt~----t~~~i~~l~~~~~~~  447 (450)
T COG0403         419 V---------DADTVLIALTETT----TKEDIDALVAAFGGV  447 (450)
T ss_pred             e---------cCCceEEEeeccc----CHHHHHHHHHHHhhh
Confidence            1         2234445544443    479999999887653

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=99.08  E-value=2.3e-07  Score=99.27  Aligned_cols=331  Identities=15%  Similarity=0.123  Sum_probs=168.0

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cC
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK  190 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~  190 (529)
                      .-.|.|.+|+...+.+. .  +....++. ++   ...++ .+++.+++....+.   ....+|||+|+..++...  ..
T Consensus        69 h~~p~i~~Ai~~ql~~~-~--~~~~~~~~-~~---~~~~l-ae~L~~~~p~~~~~---v~f~~SGsEA~e~AlklAr~~t  137 (457)
T PRK05639         69 YSHPKLVKAVQEQVALI-Q--HSMIGYTH-SE---RAIRV-AEKLAEISPIENPK---VLFGLSGSDAVDMAIKVSKFST  137 (457)
T ss_pred             CCCHHHHHHHHHHHHhc-c--ccccCccC-CH---HHHHH-HHHHHhhCCCCcCE---EEEeCchHHHHHHHHHHHHHhc
Confidence            35788998888777532 1  11101111 11   11222 36666776543221   244689999999887643  22


Q ss_pred             CCCEEEEcCCCC-Cccccc----cc-cccccccccccceEEEEEcccCCC-CC----CCCHH--------HHHHHhh---
Q 009673          191 PHDRIMGLDLPH-GGHLSH----GF-MTPKRRVSGTSIYFESMPYRLDES-TG----LVDYD--------MLEKTAI---  248 (529)
Q Consensus       191 pGD~Vl~~~~~~-~g~~s~----g~-~~~~~~i~~~g~~~~~v~~~v~~~-~~----~iD~d--------~le~~i~---  248 (529)
                      ...+|+...-.| |.+...    +. ........-.-..+..++++.... .+    .-|.+        .+++.+.   
T Consensus       138 gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~  217 (457)
T PRK05639        138 RRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHV  217 (457)
T ss_pred             CCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhh
Confidence            335677766543 322100    00 000000000000112233321000 00    01222        3444432   


Q ss_pred             --hcCCcEEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEEEeccccccc
Q 009673          249 --LFRPKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLR  317 (529)
Q Consensus       249 --~~~pklIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv~~S~hK~l~  317 (529)
                        ..+..+||+..- ..++     ..-+++++++|++||+++|+|++|. |+--.|..  ..-+. ..|+++  +.|.++
T Consensus       218 ~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv~PDiv~--~gK~l~  294 (457)
T PRK05639        218 VPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQT-GIGRTGKWFASEWFEVKPDLII--FGKGVA  294 (457)
T ss_pred             cCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcCchHHHHHhcCCCCCEEE--echhhc
Confidence              124566776521 1111     2238899999999999999999986 54222210  01111 368888  469996


Q ss_pred             -CCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cC
Q 009673          318 -GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LG  394 (529)
Q Consensus       318 -GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G  394 (529)
                       |...|.+++++      ++.+..... ..++.+++... .++..++|+.+.+.   +..++..+..++|.+.|++  .+
T Consensus       295 gG~pi~av~~~~------~i~~~~~~~-~~~T~~g~p~~-~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~  363 (457)
T PRK05639        295 SGMGLSGVIGRK------ELMDLTSGS-ALLTPAANPVI-SAAAEATLEIIEEE---NLLKNALKVGEFIKKRLLEMKES  363 (457)
T ss_pred             CCCcceeEEehH------HHHhhcCCC-cccCCCcCHHH-HHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHHh
Confidence             44448888887      565522211 11233343333 33333457766543   3456666677788888766  23


Q ss_pred             cEEecC--CCCCceEEEccCC-CCC-c---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673          395 YKLVSG--GSDNHLVLVDLRP-MGI-D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV  467 (529)
Q Consensus       395 ~~v~~~--gt~~~~~~v~~~~-~~i-~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~  467 (529)
                      +.++..  |. .-+.-+.+.. ... +   ...+.+.|.+.||.+...       ......||+..|. +   ++++|++
T Consensus       364 ~~~~~~VrG~-Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~-------g~~~~~lr~~Ppl-~---it~~~id  431 (457)
T PRK05639        364 FEVIGDVRGK-GLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSY-------GMFGNVIRITPPL-V---ITKEIAE  431 (457)
T ss_pred             CCCEEeeccc-eeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeec-------CCCCCEEEEeCCC-c---cCHHHHH
Confidence            333321  11 1222222211 110 1   234666777899998432       1124689997553 3   6799999


Q ss_pred             HHHHHHHHHHHHH
Q 009673          468 AIADFIHEGVEIT  480 (529)
Q Consensus       468 ~la~~i~~~~~~~  480 (529)
                      ++.+.+++++...
T Consensus       432 ~~~~~l~~~l~~~  444 (457)
T PRK05639        432 KGLEIMERAIKDA  444 (457)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998754

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.07  E-value=2.3e-07  Score=99.13  Aligned_cols=321  Identities=11%  Similarity=0.074  Sum_probs=169.2

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---  189 (529)
                      .-.|.|.+|+...+.. +...... . + .++  ..+  ...+++.++++...+   .....+|||+|+..++....   
T Consensus        70 h~~p~v~~Ai~~ql~~-~~~~~~~-~-~-~~~--~~~--~lAe~L~~~~p~~~~---~v~f~~sGseAve~AlKlA~~~~  138 (453)
T PRK06943         70 HANPRINAALKDQLDT-LEHAMLA-G-C-THE--PAI--ELAERLAALTGGTLG---HAFFASDGASAVEIALKMSFHAW  138 (453)
T ss_pred             CCCHHHHHHHHHHHHh-cCCcccc-c-c-CCH--HHH--HHHHHHHHhCCCCCC---EEEEeCCCHHHHHHHHHHHHHHH
Confidence            4578899998877643 2111110 0 1 111  122  233667777654322   12446899999998876541   


Q ss_pred             ----CCC-CEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccCCCC--C-------CCCHHHH
Q 009673          190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDEST--G-------LVDYDML  243 (529)
Q Consensus       190 ----~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~------------~~~~v~~~v~~~~--~-------~iD~d~l  243 (529)
                          .+| .+|+...-.|-|... +      .++..+.            .+..++++.....  .       .-|++++
T Consensus       139 ~~rg~~~r~~Ii~~~~~yHG~t~-g------als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l  211 (453)
T PRK06943        139 RNRGRGDKREFVCLANGYHGETI-G------ALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADV  211 (453)
T ss_pred             HHhCCCCCCEEEEECCCcCCCcH-H------hhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHH
Confidence                223 578877755422210 0      0111110            0112222211000  0       1135677


Q ss_pred             HHHhhhc--CCcEEEEcC--CCCCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccc-cC-CCCC-cccEEEec
Q 009673          244 EKTAILF--RPKLIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDVVTTT  311 (529)
Q Consensus       244 e~~i~~~--~pklIi~~~--s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~-~~~~-~aDiv~~S  311 (529)
                      ++.+..+  +..+||+..  ...++     ..-+++++++|++||+++|.|+.+. |+--.|. .. .-+. ..|+++.+
T Consensus       212 ~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~T-G~GRtG~~fa~~~~gv~PDivt~g  290 (453)
T PRK06943        212 RRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAV-GCGRTGTFFACEQAGVWPDFLCLS  290 (453)
T ss_pred             HHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhh-CCCCCcchhHHHhCCCCCCeEeee
Confidence            7777532  455677654  12222     2238899999999999999999853 3311121 00 0111 36899875


Q ss_pred             ccccccCC--CCeEEEeeCCCcchhHHHhhhccc-----c-cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673          312 THKSLRGP--RGGMIFFKKDPVLGVELESAINNA-----V-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC  383 (529)
Q Consensus       312 ~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~-----~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a  383 (529)
                        |.++|.  ..|.+++++      ++.+.+...     . ..++.++ +....++..+.|+.+.+++   ..+++.+..
T Consensus       291 --Kgl~gG~~Pi~av~~~~------ei~~~~~~~~~~~~~~~~~T~~g-npl~~aaa~a~L~~i~~~~---l~~~~~~~G  358 (453)
T PRK06943        291 --KGISGGYLPLSLVLSRD------AIFAAFYDDDVTRGFLHSHSYTG-NPLACRAALATLDLFAEDD---VLARNARKS  358 (453)
T ss_pred             --hhhccCcccceEEEEcH------HHHHhhcccCccCCccCCCCCCC-CHHHHHHHHHHHHHHHhcC---HHHHHHHHH
Confidence              998543  567777877      566555321     1 1222333 3333444334577665433   345566667


Q ss_pred             HHHHHHHHhc-CcEEecC--CCCCceEEEccCCC-CCc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCC
Q 009673          384 RALASRLVEL-GYKLVSG--GSDNHLVLVDLRPM-GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAM  456 (529)
Q Consensus       384 ~~l~~~L~~~-G~~v~~~--gt~~~~~~v~~~~~-~i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~  456 (529)
                      ++|.+.|++. ....+..  |. ..+.-+.+... ..+   ...+.+.+.+.||.+...          ...+|+.-| +
T Consensus       359 ~~l~~~L~~l~~~~~v~~vrG~-Gl~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~----------g~~l~~~Pp-l  426 (453)
T PRK06943        359 ARLRAALAPLAAHPQVRHLRQR-GTIFAFDVALDGDAARTFSRRFFEAALERELLLRPI----------GTTVYLMPP-Y  426 (453)
T ss_pred             HHHHHHHHHHhcCCCEEeEecc-ccEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEec----------CCEEEEeCC-C
Confidence            7777777662 1221211  11 12333344311 111   234667777899998421          135899744 4


Q ss_pred             ccCCCCHHHHHHHHHHHHHHHHH
Q 009673          457 TTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       457 tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +   ++++|++++++.+.+++..
T Consensus       427 ~---it~~eid~~~~~l~~al~~  446 (453)
T PRK06943        427 V---LDDDEIAWLAERTRATLDA  446 (453)
T ss_pred             c---CCHHHHHHHHHHHHHHHHH
Confidence            4   6799999999999999874

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=99.06  E-value=9.6e-08  Score=96.09  Aligned_cols=342  Identities=18%  Similarity=0.139  Sum_probs=162.4

Q ss_pred             cceeEecCCCCCcHHHHHHHhhhhh---cc-CCCCCCCCCCC-CCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673          103 KSLELIASENFTSRAVMEAVGSCLT---NK-YSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG  177 (529)
Q Consensus       103 ~~i~L~asen~~~~~V~eal~~~l~---~~-y~~G~p~~r~~-~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG  177 (529)
                      ..++|.-+-.-++++-++--...|.   .. +.......|.| |+..-+.+++    +.+++++|++.++    |.+...
T Consensus        23 ~~L~LdmtRGKPs~eQLdLS~~lL~~~~~~~~~~dG~D~RNY~G~l~Gipe~r----~l~a~llgv~~~~----viv~gN   94 (425)
T PF12897_consen   23 KGLKLDMTRGKPSPEQLDLSNPLLDLPGSSDYLADGTDCRNYPGGLDGIPEAR----ELFAELLGVPPEN----VIVGGN   94 (425)
T ss_dssp             TT--EES---S--HHHHHGGGGGGGSSTTCCBECTTEBTTSS-S-SS--HHHH----HHHHHHHTS-GGG----EEE-SS
T ss_pred             cCCCcccCCCCCCHHHHhhhHHHhcCCCCccccCCCccccCCCCccCChHHHH----HHHHHHhCCCHHH----EEEecc
Confidence            5677766666666666554333332   11 11112245788 7777666554    7789999999874    333333


Q ss_pred             H--HHHHHHH-Hhh----cC--------CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHH
Q 009673          178 S--PANFEVY-TAI----LK--------PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDM  242 (529)
Q Consensus       178 s--~A~~~~l-~al----l~--------pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~  242 (529)
                      |  .-++-++ .++    ..        +.=+.|++.|.|--|++        -....|  ++.+++|.++  ..+|.|.
T Consensus        95 SSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFa--------i~E~~G--iemi~VpM~~--dGPDmD~  162 (425)
T PF12897_consen   95 SSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFA--------ITEHFG--IEMIPVPMTE--DGPDMDM  162 (425)
T ss_dssp             -HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHH--------HHHHCT---EEEEEEEET--TEE-HHH
T ss_pred             chHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHH--------HHHhhC--cEEEecCCCC--CCCCHHH
Confidence            3  3222222 222    11        12267888887766653        223445  4777777763  3699999


Q ss_pred             HHHHhhh-cCCcEEEEc-CCCCCC--CCCHHHHHHHH----HHhCCEEEEeccccccccccccc-CC---CCC------c
Q 009673          243 LEKTAIL-FRPKLIIAG-ASAYPR--DFDYPRMRQIA----DAVGALLMMDMAHISGLVAASVV-AD---PFK------Y  304 (529)
Q Consensus       243 le~~i~~-~~pklIi~~-~s~~p~--~~d~~~i~~ia----~~~g~~livD~ah~~Gli~~~~~-~~---~~~------~  304 (529)
                      +|+++.+ ...|.|++. .-+||+  ...-+.++.+|    ...+..++.|.|++......+.. ..   .++      +
T Consensus       163 Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGn  242 (425)
T PF12897_consen  163 VEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGN  242 (425)
T ss_dssp             HHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-
T ss_pred             HHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcCC
Confidence            9999854 245888876 224554  33434444454    34689999999977766533221 11   111      2


Q ss_pred             cc--EEEecccc-cccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHH--
Q 009673          305 CD--VVTTTTHK-SLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV--  379 (529)
Q Consensus       305 aD--iv~~S~hK-~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i--  379 (529)
                      .|  ++..||+| +|+|...+++..++      +..+.+.+.......|.--++++.-.. =|+... .+.++.+++.  
T Consensus       243 pdrv~~F~STSKITf~GaGva~~aaS~------~Nl~~~~~~~~~~tIgpdKvNQLRHvr-ff~d~~-gGv~aHM~kHa~  314 (425)
T PF12897_consen  243 PDRVYVFASTSKITFPGAGVAFFAASE------ANLAWIKKHLSVQTIGPDKVNQLRHVR-FFKDAE-GGVRAHMRKHAA  314 (425)
T ss_dssp             TTSEEEEEESTTTS-TTSS-EEEEE-H------HHHHHHHHHHHHH-S---HHHHHHHHH-HHHSHH-THHHHHHHHHHH
T ss_pred             CCeEEEEecccccccCCcceeeeecCH------HHHHHHHHHhcCceeCccHHHHHHHHH-HhcChh-hHHHHHHHHHHH
Confidence            34  77889999 57887778988887      333333222111112222233332110 111110 0222222221  


Q ss_pred             ------HHHHHHHHHHHH-hcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCC--CCCCCCCCCCCCeEE
Q 009673          380 ------VSNCRALASRLV-ELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKN--SVPGDKSALVPGGIR  450 (529)
Q Consensus       380 ------~~~a~~l~~~L~-~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~--~~Pg~~~~~~~~~iR  450 (529)
                            ....+.|.++|. ..|+--++.....+++.+|+.+ | ....+.+++.++||.+...  +.|....| ..+.||
T Consensus       315 il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~-G-~AkrvV~lakeAGV~LT~AGAtfPyg~DP-~D~nIR  391 (425)
T PF12897_consen  315 ILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD-G-TAKRVVELAKEAGVALTPAGATFPYGKDP-RDSNIR  391 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST-T--HHHHHHHHHHTTEE---TTTTSGGG--T-TS-EEE
T ss_pred             HHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC-C-hHHHHHHHHHHhCceeCCCCCCCCCCCCC-CCCcEE
Confidence                  112223444454 3455555433345677777753 3 5678999999999998652  24432222 247899


Q ss_pred             EccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          451 IGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       451 ig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      |.-. +    -+.+|++...+.+.-+++.+
T Consensus       392 iAPS-~----P~leel~~Am~~~~~cv~la  416 (425)
T PF12897_consen  392 IAPS-Y----PSLEELETAMDVFATCVKLA  416 (425)
T ss_dssp             E--S-S----S-HHHHHHHHHHHHHHHHHH
T ss_pred             ecCC-C----CCHHHHHHHHHHHHHHHHHH
Confidence            9632 2    23699999999988887765

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.05  E-value=1.3e-07  Score=101.43  Aligned_cols=216  Identities=16%  Similarity=0.200  Sum_probs=119.4

Q ss_pred             CHHHHHHHhhhc-----CCcEEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccc-cC-CCCC-c
Q 009673          239 DYDMLEKTAILF-----RPKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-Y  304 (529)
Q Consensus       239 D~d~le~~i~~~-----~pklIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~-~~~~-~  304 (529)
                      +.+.+++.+.+.     ++.+||+..- ..++     ..-+++++++|++||+++|.|+.+. |+--.|. .. .-+. .
T Consensus       214 ~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~t-GfGRtG~~~a~e~~gv~  292 (464)
T PRK06938        214 NLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQS-GFGRTGKMFAFEHAGII  292 (464)
T ss_pred             HHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcHHHHHHhcCCC
Confidence            367778877642     3456666521 1212     2238899999999999999999853 4311111 00 0011 3


Q ss_pred             ccEEEecccccccC-CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673          305 CDVVTTTTHKSLRG-PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC  383 (529)
Q Consensus       305 aDiv~~S~hK~l~G-prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a  383 (529)
                      .|+++.+  |.++| ...|.+++++      ++ +.+......++.++......+++ +.|+.+.+.   +..+++.+..
T Consensus       293 PDiv~~g--KglggG~PlsAv~~~~------~~-~~~~~~~~~~T~~gnpla~Aaa~-a~L~~l~~~---~l~~~~~~~G  359 (464)
T PRK06938        293 PDVVVLS--KAIGGSLPLAVVVYRE------WL-DTWQPGAHAGTFRGNQMAMAAGS-ATLRYIKEH---RLAEHAAAMG  359 (464)
T ss_pred             CCEEEee--ccccCCCceEEEeehh------Hh-hccCCCCCCCCCCcCHHHHHHHH-HHHHHHHHh---HHHHHHHHHH
Confidence            6898875  99854 4457777776      44 33332222233344333333333 356665443   3455666666


Q ss_pred             HHHHHHHHhc--CcEEecC--CCCCceEEEccCCC-C---------Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCC
Q 009673          384 RALASRLVEL--GYKLVSG--GSDNHLVLVDLRPM-G---------ID---GARVEKILDMASITLNKNSVPGDKSALVP  446 (529)
Q Consensus       384 ~~l~~~L~~~--G~~v~~~--gt~~~~~~v~~~~~-~---------i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~  446 (529)
                      ++|.+.|++.  .+.++..  |. .-+.-+.+... +         .+   ...+...|.++||.+...   |   . ..
T Consensus       360 ~~l~~~L~~l~~~~~~i~~VrG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~---g---~-~~  431 (464)
T PRK06938        360 ERLREHLRQLQRDYPQLGDVRGR-GLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELG---G---R-HG  431 (464)
T ss_pred             HHHHHHHHHHHHhCCCeeeeecc-ceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeec---C---C-CC
Confidence            6777777552  2222221  11 12223333211 0         01   234566677899998431   1   0 13


Q ss_pred             CeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          447 GGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       447 ~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      ..||+.-| ++   ++++|++++.+++.+++...
T Consensus       432 ~~l~~~Pp-l~---it~~eid~~~~~l~~~l~~~  461 (464)
T PRK06938        432 SVVRFLPP-LI---ITAEQIDEVAEIFAEAVAAA  461 (464)
T ss_pred             CEEEEECC-Cc---cCHHHHHHHHHHHHHHHHHH
Confidence            56898644 44   67999999999999998753

>PRK07481 hypothetical protein; Provisional

Probab=99.05  E-value=2.2e-07  Score=99.37  Aligned_cols=201  Identities=16%  Similarity=0.201  Sum_probs=113.1

Q ss_pred             CCcEEEEcCC-CCCC-CC----CHHHHHHHHHHhCCEEEEecccccccccccc-c-CCCCC-cccEEEecccccccCC--
Q 009673          251 RPKLIIAGAS-AYPR-DF----DYPRMRQIADAVGALLMMDMAHISGLVAASV-V-ADPFK-YCDVVTTTTHKSLRGP--  319 (529)
Q Consensus       251 ~pklIi~~~s-~~p~-~~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~-~~~~~-~aDiv~~S~hK~l~Gp--  319 (529)
                      ++.+||+..- ..++ ..    -+++++++|++||+++|.|+.+. |+--.+. . ..-+. ..|+++.+  |.++|.  
T Consensus       213 ~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~  289 (449)
T PRK07481        213 TIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVT-GFGRTGSWFGSRGWGVKPDIMCLA--KGITSGYV  289 (449)
T ss_pred             cEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhh-CcCcCchhhHhhhcCCCCCEEEEe--ecccCCCc
Confidence            4556777522 1222 22    28899999999999999999864 4311110 0 00011 36888875  998652  


Q ss_pred             CCeEEEeeCCCcchhHHHhhhccc-------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673          320 RGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE  392 (529)
Q Consensus       320 rgG~i~~~~~~~~~~~l~~~i~~~-------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~  392 (529)
                      ..|.+++++      ++.+.+...       ...++.++... ..++..+.|+.+.+.   +..+++.+..++|.+.|++
T Consensus       290 Pi~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~gnpl-~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~  359 (449)
T PRK07481        290 PLGATMVNA------RIADAFEANADFGGAIMHGYTYSGHPV-ACAAALATLDIVVRE---DLPANAAKRGAYLLEGLQP  359 (449)
T ss_pred             CceEEEEcH------HHHHHHhccCccccccccCCCCCCCHH-HHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHH
Confidence            567777777      566655421       11123333233 333333457665443   3455666667777777765


Q ss_pred             c--CcEEecC--CCCCceEEEccCCC-----CCc-----HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCcc
Q 009673          393 L--GYKLVSG--GSDNHLVLVDLRPM-----GID-----GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTT  458 (529)
Q Consensus       393 ~--G~~v~~~--gt~~~~~~v~~~~~-----~i~-----~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt  458 (529)
                      .  .+.++..  |. .-+.-+.+...     ..+     ...+.+.|.+.||.+...          ...+||..| ++ 
T Consensus       360 l~~~~~~i~~vrG~-Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~----------g~~i~l~Pp-l~-  426 (449)
T PRK07481        360 LKERFELVGDVRGK-GLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPS----------GTKIILSPP-LV-  426 (449)
T ss_pred             HhhcCCCeEEEeec-ceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEec----------CCEEEEECC-CC-
Confidence            2  2332221  11 12333333211     001     234666777899998431          135888644 43 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHH
Q 009673          459 RGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       459 ~g~~~~d~~~la~~i~~~~~~  479 (529)
                        ++++|++++.+.+.+++..
T Consensus       427 --it~~eid~~~~~l~~~l~~  445 (449)
T PRK07481        427 --IQREDVDRIVDALDAGLSA  445 (449)
T ss_pred             --CCHHHHHHHHHHHHHHHHh
Confidence              5699999999999998864

>PRK07482 hypothetical protein; Provisional

Probab=99.04  E-value=1.8e-07  Score=100.26  Aligned_cols=215  Identities=15%  Similarity=0.145  Sum_probs=119.7

Q ss_pred             CHHHHHHHhhh---cCCcEEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEeccccccc--ccccccCCCCC-ccc
Q 009673          239 DYDMLEKTAIL---FRPKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGL--VAASVVADPFK-YCD  306 (529)
Q Consensus       239 D~d~le~~i~~---~~pklIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gl--i~~~~~~~~~~-~aD  306 (529)
                      +++.+++.+..   .+..+||+..- ..++     ..-+++|+++|++||+++|+|+.+. |+  ........-+. ..|
T Consensus       205 ~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~t-GfGRtG~~~a~~~~gv~PD  283 (461)
T PRK07482        205 CADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVT-GFGRLGSMFGSDHYGIEPD  283 (461)
T ss_pred             HHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEecccc-CCCcCcchhhHHhcCCCCC
Confidence            45778887742   23556776521 1212     2238899999999999999999853 43  21110000011 368


Q ss_pred             EEEecccccccCC--CCeEEEeeCCCcchhHHHhhhccc-------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHH
Q 009673          307 VVTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN  377 (529)
Q Consensus       307 iv~~S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~-------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~  377 (529)
                      +++.+  |.++|.  ..|.+++++      ++.+.+...       ...++.++ +....++..++|+.+.+++   ..+
T Consensus       284 iv~~g--Kgl~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~g-npl~~Aaa~a~L~~~~~~~---l~~  351 (461)
T PRK07482        284 LITVA--KGLTSAYAPLSGSIVGE------KVWDVLEQGSDEHGAIGHGWTYSG-HPICAAAALANLDILEREN---LVG  351 (461)
T ss_pred             EEEEc--cccccCccccceeeecH------HHHHHHhcccccCCccccCCCCCc-CHHHHHHHHHHHHHHHhCC---HHH
Confidence            99865  999552  456666666      555544311       11122333 3333444344677665443   345


Q ss_pred             HHHHHHHHHHHHHHhc--CcEEecC--CCCCceEEEccCCCC-----Cc-----HHHHHHhHhcCCeEEcCCCCCCCCCC
Q 009673          378 KVVSNCRALASRLVEL--GYKLVSG--GSDNHLVLVDLRPMG-----ID-----GARVEKILDMASITLNKNSVPGDKSA  443 (529)
Q Consensus       378 ~i~~~a~~l~~~L~~~--G~~v~~~--gt~~~~~~v~~~~~~-----i~-----~~~~~~~L~~~GI~v~~~~~Pg~~~~  443 (529)
                      ++.+..++|.+.|++.  ...++..  |. ..+.-+.+....     .+     ...+...|.+.||.+..  .|     
T Consensus       352 ~~~~~g~~l~~~L~~l~~~~~~v~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~--~~-----  423 (461)
T PRK07482        352 NAAEVGAYFRARLRAAFGDHPLVGEVRGV-GMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARA--MP-----  423 (461)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEeec-eeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEec--CC-----
Confidence            5666677777777641  2222211  11 122233332110     01     23466777789999842  11     


Q ss_pred             CCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          444 LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       444 ~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                       ....+|+..| ++   ++++|++++++.+.+++..
T Consensus       424 -~~~~i~~~Pp-l~---it~~ei~~~~~~l~~~l~~  454 (461)
T PRK07482        424 -HGDILGFAPP-LV---LTRAEADEIVAIAKDAVDE  454 (461)
T ss_pred             -CCCEEEEeCC-CC---CCHHHHHHHHHHHHHHHHH
Confidence             1356888644 44   6799999999999999874

>PRK07480 putative aminotransferase; Validated

Probab=99.02  E-value=5.4e-07  Score=96.46  Aligned_cols=213  Identities=15%  Similarity=0.120  Sum_probs=115.8

Q ss_pred             HHHHHHhhh---cCCcEEEEcCC-CC-CCCC----CHHHHHHHHHHhCCEEEEecccc-cccccccccCCCCC-cccEEE
Q 009673          241 DMLEKTAIL---FRPKLIIAGAS-AY-PRDF----DYPRMRQIADAVGALLMMDMAHI-SGLVAASVVADPFK-YCDVVT  309 (529)
Q Consensus       241 d~le~~i~~---~~pklIi~~~s-~~-p~~~----d~~~i~~ia~~~g~~livD~ah~-~Gli~~~~~~~~~~-~aDiv~  309 (529)
                      +.+++.+..   .+..+||+..- .. +...    -+++++++|++||+++|+|+++. +|-........-+. ..|+++
T Consensus       206 ~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~  285 (456)
T PRK07480        206 RQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMT  285 (456)
T ss_pred             HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeee
Confidence            566655532   13456776521 22 2222    28999999999999999999963 32221100000011 368877


Q ss_pred             ecccccccCC--CCeEEEeeCCCcchhHHHhhhc--cc--ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHH-HHH
Q 009673          310 TTTHKSLRGP--RGGMIFFKKDPVLGVELESAIN--NA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV-VSN  382 (529)
Q Consensus       310 ~S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~--~~--~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i-~~~  382 (529)
                      ++  |.++|.  ..|.+++++      ++.+.+.  ..  ...++.++. ....++..++|+.+.+++   ..+++ .+.
T Consensus       286 ~g--K~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~T~~gn-pl~~Aaa~a~L~~l~~~~---l~~~~~~~~  353 (456)
T PRK07480        286 IA--KGLTSGYIPMGAVGVGD------RVAEVLIEEGGEFNHGFTYSGH-PVAAAVALANLRILRDEG---IVERVRDDT  353 (456)
T ss_pred             ee--hhhccCCccceEEEEcH------HHHHHHhcCCCCcccCCCCCcC-HHHHHHHHHHHHHHHhCC---HHHHHHHHH
Confidence            64  999652  456666776      5655552  11  122334443 334444444677665443   34455 355


Q ss_pred             HHHHHHHHHhc-CcEEecC--CCCCceEEEccCCC-C----C-c----HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeE
Q 009673          383 CRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPM-G----I-D----GARVEKILDMASITLNKNSVPGDKSALVPGGI  449 (529)
Q Consensus       383 a~~l~~~L~~~-G~~v~~~--gt~~~~~~v~~~~~-~----i-~----~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~i  449 (529)
                      .++|.+.|++. ...++..  |. .-+.-+.+... .    . +    ...+...+.+.||.+...          ...+
T Consensus       354 g~~l~~~l~~l~~~~~i~~vrG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------~~~l  422 (456)
T PRK07480        354 GPYLQKRLRELADHPLVGEVRGV-GLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV----------GDRM  422 (456)
T ss_pred             HHHHHHHHHHhhcCCCeeeEEee-cceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec----------CCEE
Confidence            66666666552 1222211  11 12222333111 0    0 1    134566677899998421          2468


Q ss_pred             EEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          450 RIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       450 Rig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      |+. |.++   ++++|++++.+.+.+++...
T Consensus       423 ~~~-Ppl~---it~~eid~~~~~l~~al~~~  449 (456)
T PRK07480        423 IIS-PPLV---ITHAEIDELVEKARKALDAT  449 (456)
T ss_pred             EEE-CCCC---CCHHHHHHHHHHHHHHHHHH
Confidence            997 4444   57999999999999998753

>PRK07483 hypothetical protein; Provisional

Probab=99.02  E-value=2.6e-07  Score=98.52  Aligned_cols=220  Identities=17%  Similarity=0.183  Sum_probs=121.1

Q ss_pred             HHHHHHhhh---cCCcEEEEcCCC--CCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccc-cC-CCCC-cccE
Q 009673          241 DMLEKTAIL---FRPKLIIAGASA--YPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDV  307 (529)
Q Consensus       241 d~le~~i~~---~~pklIi~~~s~--~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~-~~~~-~aDi  307 (529)
                      +++++.+..   .+..+||+..-.  .++     ..-+++++++|++||+++|+|+.+. |+--.|. .. .-+. ..|+
T Consensus       186 ~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-GfGRtG~~~a~~~~gv~PDi  264 (443)
T PRK07483        186 DELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMC-GMGRTGTLFACEEDGVAPDL  264 (443)
T ss_pred             HHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEeccee-CcccCcHHHHHhhcCCCCCe
Confidence            566665542   134567765321  222     1238899999999999999999864 4311121 00 0011 3688


Q ss_pred             EEecccccccCC--CCeEEEeeCCCcchhHHHhhhccc--c-c-CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 009673          308 VTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA--V-F-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS  381 (529)
Q Consensus       308 v~~S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~--~-~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~  381 (529)
                      ++.+  |.++|.  +.|.+++++      ++.+.+...  . . ..+.++... ..++..+.++.+.+++   ..+++.+
T Consensus       265 v~~g--K~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~h~~T~~gnpl-~~aaa~a~l~~i~~~~---l~~~~~~  332 (443)
T PRK07483        265 VTIA--KGLGAGYQPIGAVLASD------RIYDAIADGSGFFQHGHTYLGHAT-ACAAALAVQRVIAEDG---LLANVRA  332 (443)
T ss_pred             eeeh--hhhccCccccEEEEEcH------HHHHHHhcCCCccccCCCCCCCHH-HHHHHHHHHHHHHhcC---HHHHHHH
Confidence            8875  998543  567788877      566555422  1 1 123333233 3333334566665433   4566666


Q ss_pred             HHHHHHHHHHh--cCcEEecC--CCCCceEEEccCCC-----CCc-----HHHHHHhHhcCCeEEcCCCCCCCCCCCCCC
Q 009673          382 NCRALASRLVE--LGYKLVSG--GSDNHLVLVDLRPM-----GID-----GARVEKILDMASITLNKNSVPGDKSALVPG  447 (529)
Q Consensus       382 ~a~~l~~~L~~--~G~~v~~~--gt~~~~~~v~~~~~-----~i~-----~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~  447 (529)
                      ..++|.+.|++  ..+.++..  |. .-+.-+.+...     ..+     ...+.+.+.+.||.+....  +........
T Consensus       333 ~g~~l~~~L~~l~~~~~~i~~vRG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~--~~~~~~~~~  409 (443)
T PRK07483        333 RGEQLRARLRERLGQHPHVGDIRGR-GLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMG--GTIDGVRGD  409 (443)
T ss_pred             HHHHHHHHHHHHHhcCCCeeeEeec-ccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecC--ccccCCCCC
Confidence            67777777765  22332221  11 12222333110     001     2346677778999985320  000001135


Q ss_pred             eEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          448 GIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       448 ~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      .|||.-| ++   ++++|+++++++|.+++...
T Consensus       410 ~l~~~Pp-L~---it~~eid~~~~~l~~~l~~~  438 (443)
T PRK07483        410 HVLLAPP-FI---ITAAQIDEIVERLGDAIDAA  438 (443)
T ss_pred             EEEEECC-CC---CCHHHHHHHHHHHHHHHHHH
Confidence            7999644 54   67999999999999998753

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.02  E-value=4.9e-07  Score=97.02  Aligned_cols=213  Identities=15%  Similarity=0.125  Sum_probs=114.9

Q ss_pred             HHHHHHHhhh--cCCcEEEEcC--CCCCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccc-cC-CCCC-cccE
Q 009673          240 YDMLEKTAIL--FRPKLIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDV  307 (529)
Q Consensus       240 ~d~le~~i~~--~~pklIi~~~--s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~-~~~~-~aDi  307 (529)
                      ++.+++.+..  .+..+||+..  ...++     ..-+++++++|++||+++|.|+.+. |+--.|. .. .-+. ..|+
T Consensus       223 ~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~T-GfGRtG~~~a~e~~gv~PDi  301 (472)
T PRK08742        223 ADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIAT-GFGRTGTLFACEQAGVMPDL  301 (472)
T ss_pred             HHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccchHHHhcCCCCCE
Confidence            5667777753  2455667654  12222     2238899999999999999999864 3311121 00 0011 3689


Q ss_pred             EEecccccccCC--CCeEEEeeCCCcchhHHHhhhccc-----cc-CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHH
Q 009673          308 VTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA-----VF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV  379 (529)
Q Consensus       308 v~~S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~-----~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i  379 (529)
                      ++.+  |.|+|.  ..|.+++++      ++.+.+...     .. ..+.++ +....++..++|+.+.++++   .++.
T Consensus       302 v~~g--Kgl~gG~~Plaav~~~~------ei~~~~~~~~~~~~~~h~~T~~g-npl~~Aaa~a~L~~i~~~~l---~~~~  369 (472)
T PRK08742        302 LCLS--KGLTGGFLPLSAVLATQ------QLYDAFLDDSRERAFLHSHSYTG-NPLACAAALATLDIFADDDV---IARN  369 (472)
T ss_pred             EEEc--ccccCCCCCcceeeccH------HHHHHhhccCccCccCcCCCCCc-cHHHHHHHHHHHHHHHHCCH---HHHH
Confidence            9875  999543  457777776      565544321     11 122333 23334443345776654443   3333


Q ss_pred             HHHHHHHHHHHHhc-CcEEecC--CCCCceEEEccCCCC-------Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCC
Q 009673          380 VSNCRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMG-------ID---GARVEKILDMASITLNKNSVPGDKSALVP  446 (529)
Q Consensus       380 ~~~a~~l~~~L~~~-G~~v~~~--gt~~~~~~v~~~~~~-------i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~  446 (529)
                      .+..++|.+.++.. .+.++.+  |. ..+.-+.+....       .+   ...+.+.+.+.||.+...          .
T Consensus       370 ~~~g~~l~~~~~~~~~~~~i~dvRG~-Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------g  438 (472)
T PRK08742        370 QPTAARMTQLAAQIGEHPHVADVRQA-GMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPL----------G  438 (472)
T ss_pred             HHHHHHHHHHHHHHhcCCCeeeEecc-ceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEec----------C
Confidence            33344444433321 1222221  11 122223332110       01   134556677899998431          2


Q ss_pred             CeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          447 GGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       447 ~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      +.|||. |.++   ++++|++++.+.|.+++...
T Consensus       439 ~vi~~~-PpL~---it~~ei~~~~~~l~~~l~~~  468 (472)
T PRK08742        439 DVLYWM-PPYC---VDEAQLALLADTTRHAIDEA  468 (472)
T ss_pred             CEEEEE-CCCC---CCHHHHHHHHHHHHHHHHHH
Confidence            579996 4454   67999999999999998754

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.02  E-value=2.5e-07  Score=99.12  Aligned_cols=321  Identities=17%  Similarity=0.108  Sum_probs=168.7

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---  189 (529)
                      .-.|+|.+|+...+.. ...+..   +...++.  .+  ...+++.+++....+   .....+|||+|+..++....   
T Consensus        72 h~~p~v~~Ai~~ql~~-l~~~~~---~~~~~~~--~~--~lae~L~~~~p~~~~---~v~f~~SGseAve~AlklAr~~~  140 (460)
T PRK06916         72 HQVPELDEAIREQLNK-IAHSTL---LGLANVP--SI--LLAEKLIEVVPEGLK---KVFYSDSGATAVEIAIKMAFQYW  140 (460)
T ss_pred             CCCHHHHHHHHHHHHh-CCCccc---cccCCHH--HH--HHHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence            4578899998877753 221111   1111221  22  233667777643222   23556899999998876432   


Q ss_pred             ----CCC-CEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccC---CCCC------CCCHHHH
Q 009673          190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLD---ESTG------LVDYDML  243 (529)
Q Consensus       190 ----~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~------------~~~~v~~~v~---~~~~------~iD~d~l  243 (529)
                          .+| .+|+...-.|-|... +      .++..+.            ....++++..   +...      .-+++.+
T Consensus       141 ~~~g~tgr~~ii~~~~~YHG~t~-~------als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l  213 (460)
T PRK06916        141 QNKGKPKKQRFVTLKNAYHGDTI-G------AVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEEL  213 (460)
T ss_pred             HhcCCCCCcEEEEECCcCCcccH-H------hHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHH
Confidence                243 578877755422210 0      1111110            0112222210   0000      1235667


Q ss_pred             HHHhhhc--CCcEEEEcC--CCCCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEec
Q 009673          244 EKTAILF--RPKLIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTT  311 (529)
Q Consensus       244 e~~i~~~--~pklIi~~~--s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S  311 (529)
                      ++.++..  +..+||+..  ...++     ..-+++++++|++||+++|+|+++ .|+--.|.. . .-+. ..|+++. 
T Consensus       214 ~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~-TG~GRtG~~~a~~~~gv~PDiv~~-  291 (460)
T PRK06916        214 EELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVA-TGFGRTGKMFACEHENVTPDIMTA-  291 (460)
T ss_pred             HHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechh-hCCCcCchhhHHHhcCCCCCeeee-
Confidence            7777532  455666654  12222     223789999999999999999996 443111210 0 0011 3688875 


Q ss_pred             ccccccCC--CCeEEEeeCCCcchhHHHhhhcc------ccc-CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 009673          312 THKSLRGP--RGGMIFFKKDPVLGVELESAINN------AVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN  382 (529)
Q Consensus       312 ~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~------~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~  382 (529)
                       .|.++|.  ..|.+++++      ++.+.+..      ..+ .++.++... .+++..+.|+.+.++   ++.+++.++
T Consensus       292 -gK~l~gG~~Pi~av~~~~------ei~~~~~~~~~~~~~~~~~~T~~gnpl-~~aaa~a~l~~l~~~---~l~~~~~~~  360 (460)
T PRK06916        292 -GKGLTGGYLPIAITVTTD------EIYNAFYGDYEEQKTFFHGHSYTGNPL-GCAVALANLELYEKT---NLIEQVARK  360 (460)
T ss_pred             -ehhhhcCccccceeeecH------HHHHHhhccccccCccccCCCCCCCHH-HHHHHHHHHHHHHhc---cHHHHHHHH
Confidence             5998543  467777777      56554421      111 223344333 333333456665443   345667777


Q ss_pred             HHHHHHHHHhc-CcEEecC--CCCCceEEEccCCC-------CCc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeE
Q 009673          383 CRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPM-------GID---GARVEKILDMASITLNKNSVPGDKSALVPGGI  449 (529)
Q Consensus       383 a~~l~~~L~~~-G~~v~~~--gt~~~~~~v~~~~~-------~i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~i  449 (529)
                      .++|.+.|++. ...++..  |. .-+.-+.+...       ..+   ...+...|.+.||.+...          ...+
T Consensus       361 g~~l~~~l~~l~~~~~v~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----------g~~l  429 (460)
T PRK06916        361 TEYVATQLEDLFALKHVGDIRQL-GLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPL----------GNTI  429 (460)
T ss_pred             HHHHHHHHHHhhcCCCeEEeecC-CceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEec----------CCEE
Confidence            77788877762 1222211  11 12222222211       001   235667778899998421          2478


Q ss_pred             EEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          450 RIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       450 Rig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      |+. |.++   ++++|++++.+.+.+++..
T Consensus       430 ~~~-Ppl~---it~~~id~~~~~l~~~l~~  455 (460)
T PRK06916        430 VFM-PPLA---STIDELDEMLRILYKAISD  455 (460)
T ss_pred             EEe-CCcc---cCHHHHHHHHHHHHHHHHh
Confidence            885 3444   6799999999999999864

>PRK06148 hypothetical protein; Provisional

Probab=99.00  E-value=3.8e-07  Score=106.36  Aligned_cols=322  Identities=17%  Similarity=0.177  Sum_probs=168.5

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-c-CC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-L-KP  191 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l-~p  191 (529)
                      -.|+|.+|+...+... ..   ..+|.  ++   . +....+++.+.+.-..+   .....+|||+|+..++... . ..
T Consensus       639 ~hp~v~~Ai~~q~~~l-~~---~~~~~--~~---~-~~~lAe~L~~~~p~~~~---~v~f~nSGsEA~e~AlklAr~~tG  705 (1013)
T PRK06148        639 AHPRVVAAAARQAARL-NT---NTRYL--HD---A-IVAYAERLTATLPDGLT---VAFFVNSGSEANSLALRLARAHTG  705 (1013)
T ss_pred             CCHHHHHHHHHHHhhc-CC---cCCcC--CH---H-HHHHHHHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHhcC
Confidence            3789999988777532 11   11221  11   1 12233667776643222   2345689999999888643 2 22


Q ss_pred             CCEEEEcCCCCCcccccccccccccccccc------------ceEEEEEcccC-CCCCC-CC-------HHHHHHHhhh-
Q 009673          192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLD-ESTGL-VD-------YDMLEKTAIL-  249 (529)
Q Consensus       192 GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g------------~~~~~v~~~v~-~~~~~-iD-------~d~le~~i~~-  249 (529)
                      ..+|+...-.|-|... +      .+...+            ..+..++.+.. ...+. .|       .+.+++.+.. 
T Consensus       706 r~~ii~~~~~YHG~t~-~------a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~  778 (1013)
T PRK06148        706 QRDAIVLDHAYHGTTT-E------LIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAM  778 (1013)
T ss_pred             CCeEEEEcCCccCCCc-c------hhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhh
Confidence            3568777654322210 1      011111            00111111100 00011 11       1345555531 


Q ss_pred             ----cCCcEEEEcC--CCCCCCC----CHHHHHHHHHHhCCEEEEecccc-cccccccccC-CCCC-cccEEEecccccc
Q 009673          250 ----FRPKLIIAGA--SAYPRDF----DYPRMRQIADAVGALLMMDMAHI-SGLVAASVVA-DPFK-YCDVVTTTTHKSL  316 (529)
Q Consensus       250 ----~~pklIi~~~--s~~p~~~----d~~~i~~ia~~~g~~livD~ah~-~Gli~~~~~~-~~~~-~aDiv~~S~hK~l  316 (529)
                          .++.+||+..  .+.+...    -+++++++|++||+++|+|+.+. +|-....... .-.. ..|+++.+  |.+
T Consensus       779 ~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~g--K~l  856 (1013)
T PRK06148        779 AAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMG--KPI  856 (1013)
T ss_pred             hccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeec--ccc
Confidence                2355677652  1222222    28899999999999999999963 3322211110 0011 36898765  998


Q ss_pred             c-CCCCeEEEeeCCCcchhHHHhhhcccc-cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-
Q 009673          317 R-GPRGGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-  393 (529)
Q Consensus       317 ~-GprgG~i~~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-  393 (529)
                      + |...|.+++++      ++.+.++... +.++.++......+++ +.|+.+.++   +..+++.+..++|.+.|++. 
T Consensus       857 ggG~Plgav~~~~------ei~~~~~~g~~~~~Tf~gnpla~aaa~-a~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~  926 (1013)
T PRK06148        857 GNGHPMGAVVTTR------EIADSFDNGMEYFNTFGGNPVSCAIGL-AVLDIIEDE---DLQRNALEIGNYLLAGLRELQ  926 (1013)
T ss_pred             cCCcceEEEEEcH------HHHhhccCCCccccCCCCCHHHHHHHH-HHHHHHhhc---cHHHHHHHHHHHHHHHHHHHH
Confidence            4 44568888877      6766665432 2234455444444444 357766543   34566666677777777662 


Q ss_pred             -CcEEecC--CCCCceEEEccCCC----CCc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCH
Q 009673          394 -GYKLVSG--GSDNHLVLVDLRPM----GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSE  463 (529)
Q Consensus       394 -G~~v~~~--gt~~~~~~v~~~~~----~i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~  463 (529)
                       .+.++..  |. ..+.-+.+...    .-+   ...+.+.|.+.||.+...   |   + ....|||..| ++   +++
T Consensus       927 ~~~~~i~~VrG~-Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~---g---~-~~~vlr~~Pp-l~---it~  994 (1013)
T PRK06148        927 DRFDIIGDVRGM-GLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTE---G---P-HDNVLKIRPP-LI---FSR  994 (1013)
T ss_pred             HhCCCceEEeee-ceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEecc---C---C-CCCEEEEeCC-cc---CCH
Confidence             2222211  11 12222333211    011   234667777899998532   1   1 1367999744 44   679


Q ss_pred             HHHHHHHHHHHHHHHH
Q 009673          464 KEFVAIADFIHEGVEI  479 (529)
Q Consensus       464 ~d~~~la~~i~~~~~~  479 (529)
                      +|++++++.+.+++..
T Consensus       995 ~~id~~l~~l~~~l~~ 1010 (1013)
T PRK06148        995 ADADHLLEVLDDVLAA 1010 (1013)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999998864

>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]

Probab=98.99  E-value=1e-07  Score=97.30  Aligned_cols=316  Identities=15%  Similarity=0.046  Sum_probs=178.3

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCC------ceeeecCChHHHHHHHHHhh-------cCCC-----------CEEEE
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKW------GVNVQPLSGSPANFEVYTAI-------LKPH-----------DRIMG  197 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~------~~~V~~~sGs~A~~~~l~al-------l~pG-----------D~Vl~  197 (529)
                      .++...+||...-+|+.++++++....      +.-|.-.|.|++++.++.+-       ++.+           +-|+.
T Consensus       107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y  186 (511)
T KOG0628|consen  107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY  186 (511)
T ss_pred             cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEE
Confidence            356788999999999999999874211      11233356677777766553       2222           22332


Q ss_pred             cCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcC-----CcEEEEc-CCCCCC-CCCHHH
Q 009673          198 LDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAG-ASAYPR-DFDYPR  270 (529)
Q Consensus       198 ~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~-----pklIi~~-~s~~p~-~~d~~~  270 (529)
                      .+-  .+|-+-     .++....+  ++...++.| +++.++.+.|+++|++..     |-+++.+ .+.++. ..++.+
T Consensus       187 ~SD--qahssv-----eka~~i~~--VklR~l~td-~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~e  256 (511)
T KOG0628|consen  187 CSD--QAHSSV-----EKACLIAG--VKLRALPTD-ENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEE  256 (511)
T ss_pred             ecC--cccchH-----HHhHhhcc--eeEEEeecc-cCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHH
Confidence            221  122111     11222233  344445555 378999999999998753     4455554 233333 668999


Q ss_pred             HHHHHHHhCCEEEEecccccccccc-ccc---CCCCCcccEEEecccccccC-CCCeEEEeeCCC--------cchhHHH
Q 009673          271 MRQIADAVGALLMMDMAHISGLVAA-SVV---ADPFKYCDVVTTTTHKSLRG-PRGGMIFFKKDP--------VLGVELE  337 (529)
Q Consensus       271 i~~ia~~~g~~livD~ah~~Gli~~-~~~---~~~~~~aDiv~~S~hK~l~G-prgG~i~~~~~~--------~~~~~l~  337 (529)
                      |..+|+++|+||++|+| |+|-... ...   -..++++|-+.+..|||+.- .-...++.+++.        ...+--.
T Consensus       257 lg~Vc~~~glWLHVDAA-YAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h  335 (511)
T KOG0628|consen  257 LGPVCREEGLWLHVDAA-YAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKH  335 (511)
T ss_pred             hcchhhhcCEEEEeehh-hccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcc
Confidence            99999999999999998 5553321 111   12345789999999999632 222344444431        0000000


Q ss_pred             hhhcccccCCCCCCChHHHHHHH--HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceEEEccCCC
Q 009673          338 SAINNAVFPGLQGGPHNHTIGGL--AVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRPM  414 (529)
Q Consensus       338 ~~i~~~~~p~~~g~p~~~~iaal--a~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~~v~~~~~  414 (529)
                      +........-..+=|....+-++  +..++....+.+++|+++..+.++.+.+.+.+ .-|++..+   .++-++.++.+
T Consensus       336 ~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~---~~lgLvcFRlk  412 (511)
T KOG0628|consen  336 AYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNK---RILGLVCFRLK  412 (511)
T ss_pred             hhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecc---cccceeEEeec
Confidence            11111110011222333344444  33455555556677777777777777666655 56887764   46666666655


Q ss_pred             CCcH--HHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          415 GIDG--ARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       415 ~i~~--~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      +-+.  +.+.+.+ ....|...+.++-      +.-.||+.+.+-   -.+++|+++.-+.|.+.....
T Consensus       413 ~~N~~ne~Ll~~in~~g~i~l~~~~l~------gk~vlRf~V~s~---~t~~~di~~a~~~I~~~a~~l  472 (511)
T KOG0628|consen  413 GDNEINEALLNRLNSSGRIHLVPASLH------GKFVLRFAVCSP---LTNESDIDEAWKIIFEAADEL  472 (511)
T ss_pred             CCcHHHHHHHHHHHhcCcEEEEEeeec------ceEEEEEEecCC---CCcHHHHHHHHHHHHHHHHHH
Confidence            5332  3455555 4456776433211      123589865432   245899999998888877653

>PRK06917 hypothetical protein; Provisional

Probab=98.97  E-value=4.9e-07  Score=96.55  Aligned_cols=330  Identities=15%  Similarity=0.106  Sum_probs=170.5

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---  189 (529)
                      .-.|+|.+|+...+.. ....+.. . +. ++    .+....+++.+++.-..+   .....+|||+|+..++....   
T Consensus        47 h~hp~v~~Ai~~ql~~-~~~~~~~-~-~~-~~----~~~~lae~L~~~~p~~~~---~v~f~~sGsEAve~AlklAr~~~  115 (447)
T PRK06917         47 HGVKEIADAIKEQAEE-VSFVYRS-Q-FT-SE----PAEKLAKKLSDLSPGDLN---WSFFVNSGSEANETAMKIAIQHF  115 (447)
T ss_pred             CCCHHHHHHHHHHHhh-CcCcccc-c-cC-CH----HHHHHHHHHHHhCCCCCC---EEEEeCChHHHHHHHHHHHHHHH
Confidence            4578899888877753 2211110 1 11 12    122233667777643322   13456899999998887541   


Q ss_pred             ----CCC-CEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccCC-----CC-C---CCCHHHH
Q 009673          190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDE-----ST-G---LVDYDML  243 (529)
Q Consensus       190 ----~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~------------~~~~v~~~v~~-----~~-~---~iD~d~l  243 (529)
                          .+| .+|+...-.|-|... +      .+...+.            .+..++++...     ++ .   .-|.+.+
T Consensus       116 ~~rg~t~r~~ii~~~~~yHG~t~-~------als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l  188 (447)
T PRK06917        116 QERGIQGKHKILSRWMSYHGITM-G------ALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATEL  188 (447)
T ss_pred             HhcCCCCCCEEEEECCCcCCccH-H------HHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHH
Confidence                233 578877654322210 0      0111110            01111211100     00 0   0134667


Q ss_pred             HHHhhhc---CCcEEEEcCC-C-CCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEe
Q 009673          244 EKTAILF---RPKLIIAGAS-A-YPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTT  310 (529)
Q Consensus       244 e~~i~~~---~pklIi~~~s-~-~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~  310 (529)
                      ++.++.+   +..+||+..- . .++     ..-+++++++|++||+++|+|+++. |+--.+.. . .-+. ..|+++.
T Consensus       189 e~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~t-GfGRtG~~~a~~~~gv~PDi~~~  267 (447)
T PRK06917        189 ETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMT-GLGRTGAMFAMEHWGVEPDIMTL  267 (447)
T ss_pred             HHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhh-CcCcccchhhHHhcCCCCCEEEe
Confidence            7777642   3556776632 1 121     2237899999999999999999974 53111210 0 0011 3688765


Q ss_pred             cccccccCC--CCeEEEeeCCCcchhHHHhhhccc---ccC-CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673          311 TTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA---VFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR  384 (529)
Q Consensus       311 S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~---~~p-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~  384 (529)
                        .|.++|.  ..|.+++++      ++.+.+...   .+. ++.++... .+++..+.++.+.++   +..+++.+..+
T Consensus       268 --gK~l~~G~~Pi~a~~~~~------~i~~~~~~~~~~~~~~~T~~gnpl-~~aaa~a~l~~l~~~---~l~~~~~~~g~  335 (447)
T PRK06917        268 --GKGLGAGYTPIAATVVSD------RVMEPILRGSRSIMSGHTLSANPL-SAATALAVLEYMEKH---NLPEKAAEKGE  335 (447)
T ss_pred             --eehhccCCcceEEEEEcH------HHHHHHhccCcccccccCCCCCHH-HHHHHHHHHHHHHHC---CHHHHHHHHHH
Confidence              5999653  567777877      566655321   111 23333333 344433457665443   34566666677


Q ss_pred             HHHHHHHhc--CcEEecC--CCCCceEEEccCCC-----CC--c---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEE
Q 009673          385 ALASRLVEL--GYKLVSG--GSDNHLVLVDLRPM-----GI--D---GARVEKILDMASITLNKNSVPGDKSALVPGGIR  450 (529)
Q Consensus       385 ~l~~~L~~~--G~~v~~~--gt~~~~~~v~~~~~-----~i--~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iR  450 (529)
                      +|.+.|++.  .+.++..  |. ..+.-+.+...     ..  +   ...+.+.|.+.||.+....  ..........+|
T Consensus       336 ~l~~~L~~l~~~~~~i~~vrG~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~--~~~~g~~~~~i~  412 (447)
T PRK06917        336 YLIKGLQKVQQQSTIIGDVRGK-GLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAV--AGQDGKEGDAVI  412 (447)
T ss_pred             HHHHHHHHHHhcCCCEEEEeec-ceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecc--cccCCCCCCEEE
Confidence            777777662  2222221  11 12222333110     00  1   2346667788999984320  000001135789


Q ss_pred             EccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          451 IGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       451 ig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      +..| ++   ++++|++++++.+.+++...
T Consensus       413 l~Pp-l~---it~~eid~~~~~l~~~l~~~  438 (447)
T PRK06917        413 IAPP-MT---ITYSELDELLSIFAKSVEEM  438 (447)
T ss_pred             EECC-Cc---CCHHHHHHHHHHHHHHHHHH
Confidence            9754 43   56999999999999999754

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=98.96  E-value=2.2e-06  Score=91.83  Aligned_cols=187  Identities=17%  Similarity=0.242  Sum_probs=103.2

Q ss_pred             HHHHHHHHHHhCCEEEEecccccccccccc-cC-CCCC-cccEEEeccccccc-CCCCeEEEeeCCCcchhHHHhhhccc
Q 009673          268 YPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELESAINNA  343 (529)
Q Consensus       268 ~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~-~~~~-~aDiv~~S~hK~l~-GprgG~i~~~~~~~~~~~l~~~i~~~  343 (529)
                      +++++++|++||+++|.|+.+. |+--.|. .. .-+. ..|+++.+  |.++ |...|.+++++      ++ +.+...
T Consensus       248 l~~lr~lc~~~g~LlI~DEV~t-GfGRtG~~~a~~~~gv~PDivt~g--K~l~gG~Pi~av~~~~------~~-~~~~~~  317 (459)
T PRK06931        248 LQKIREVTQKHGILLIVDEVQA-GFARTGKMFAFEHAGIEPDIIVMS--KAVGGGLPLAVLGIKK------EF-DAWQPG  317 (459)
T ss_pred             HHHHHHHHHHcCCEEEEecchh-cCCcCchHHHhhhcCCCCCEEEec--ccccCCcceeeeeeHH------HH-hhccCC
Confidence            8899999999999999999864 3311111 00 0011 36898875  9984 43456666665      43 333322


Q ss_pred             ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEecC--CCCCceEEEccCCC-C---
Q 009673          344 VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSG--GSDNHLVLVDLRPM-G---  415 (529)
Q Consensus       344 ~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~~--gt~~~~~~v~~~~~-~---  415 (529)
                      ...++.++... ..++..+.|+.+.+.+   ..+++.+..++|.+.|++.  .+.++..  |. .-+.-+.+... .   
T Consensus       318 ~~~~T~~gnpl-a~aaala~L~~l~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~-Glm~giel~~~~~~~~  392 (459)
T PRK06931        318 GHTGTFRGNQL-AMATGLTTLKILKEEN---LAQNAAERGEWLKAQLAELQKRYPCIGNVRGR-GLMIGIEIVDERQPAD  392 (459)
T ss_pred             CCCCCCCCCHH-HHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHhCCCeEeEecC-ceEEEEEEccCccccc
Confidence            22233344333 3333334566665443   3455555566666666552  1222211  11 12222333211 0   


Q ss_pred             ------Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          416 ------ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       416 ------i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                            .+   ...+.+.|.+.||.+...    .   .....+|+..| ++   ++++|++++.+++.+++...
T Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~----~---~~~~~l~~~Pp-l~---it~~eid~~~~~l~~~l~~~  455 (459)
T PRK06931        393 AMGSYPADGELAAAIQKACFENGLLLERG----G---RNGNVVRLLPP-LL---ITQAECEEFIDRFEQALLAA  455 (459)
T ss_pred             ccccCCccHHHHHHHHHHHHHCCcEEeec----C---CCCCEEEEECC-CC---cCHHHHHHHHHHHHHHHHHH
Confidence                  01   134556677899998431    1   11356998654 43   67999999999999998754

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=98.94  E-value=1.2e-06  Score=94.05  Aligned_cols=213  Identities=14%  Similarity=0.128  Sum_probs=120.8

Q ss_pred             HHHHHHHhhhc--CCcEEEEcC--CCCCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccc-cC-CCCC-cccE
Q 009673          240 YDMLEKTAILF--RPKLIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDV  307 (529)
Q Consensus       240 ~d~le~~i~~~--~pklIi~~~--s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~-~~~~-~aDi  307 (529)
                      ++.+++.+..+  +..+||+..  ...++     ..-+++++++|++||+++|+|+.+. |+--.|. .. ..+. ..|+
T Consensus       201 l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~T-GfGRtG~~~a~~~~gv~PDi  279 (466)
T PRK07030        201 FAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAV-GFGRTGTMFACEQAGIRPDF  279 (466)
T ss_pred             HHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-CcCccccchHHHhcCCCCCE
Confidence            46677777532  345666654  12222     1238899999999999999999853 3311111 00 0111 3689


Q ss_pred             EEecccccccCC--CCeEEEeeCCCcchhHHHhhhcc------c-ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHH
Q 009673          308 VTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINN------A-VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK  378 (529)
Q Consensus       308 v~~S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~------~-~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~  378 (529)
                      ++++  |.++|.  ..|.+++++      ++.+.+..      . ...++.++... ..++..++|+.+.+++   ..++
T Consensus       280 v~~g--Kgl~gG~~Pi~av~~~~------ei~~~~~~~~~~~~~~~h~~T~~gnpl-a~aaa~a~L~~i~~~~---l~~~  347 (466)
T PRK07030        280 LCLS--KALTGGYLPLAAVLTTD------TVYQAFYDDYPTLRAFLHSHSYTGNPL-ACAAALATLDIFEQDN---VIEN  347 (466)
T ss_pred             Eeee--hhccCCcccceEEEecH------HHHHHHhcccccccccccCCCCCCCHH-HHHHHHHHHHHHHhcC---HHHH
Confidence            8875  998543  567788877      66655431      1 11223333233 3444344677665433   4556


Q ss_pred             HHHHHHHHHHHHHhc-CcEEecC--CCCCceEEEccCCCC-------Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCC
Q 009673          379 VVSNCRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMG-------ID---GARVEKILDMASITLNKNSVPGDKSALV  445 (529)
Q Consensus       379 i~~~a~~l~~~L~~~-G~~v~~~--gt~~~~~~v~~~~~~-------i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~  445 (529)
                      ..+..++|.+.|++. .+..+..  |. ..+.-+.+....       .+   ...+.+.+.+.||.+...          
T Consensus       348 ~~~~G~~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----------  416 (466)
T PRK07030        348 NRALARRMAEATAHLADHPHVAEVRQT-GMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPL----------  416 (466)
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEeEec-eeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEec----------
Confidence            666667777777652 1222211  11 122333332111       01   134666777899998421          


Q ss_pred             CCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          446 PGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       446 ~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      ...+|+.. .++   ++++|++++.+.+.+++...
T Consensus       417 g~~i~~~P-pl~---it~~eid~~~~~l~~al~~~  447 (466)
T PRK07030        417 GSVVYFLP-PYV---ITPEQIDFLAEVASEGIDIA  447 (466)
T ss_pred             CCEEEEEC-Ccc---CCHHHHHHHHHHHHHHHHHH
Confidence            24688853 344   67999999999999999764

>PRK07036 hypothetical protein; Provisional

Probab=98.92  E-value=1.1e-06  Score=94.23  Aligned_cols=213  Identities=17%  Similarity=0.153  Sum_probs=118.4

Q ss_pred             HHHHHHhhh---cCCcEEEEcCC-C-CCCCCC----HHHHHHHHHHhCCEEEEecccc-cccccc-cccCCCCC-cccEE
Q 009673          241 DMLEKTAIL---FRPKLIIAGAS-A-YPRDFD----YPRMRQIADAVGALLMMDMAHI-SGLVAA-SVVADPFK-YCDVV  308 (529)
Q Consensus       241 d~le~~i~~---~~pklIi~~~s-~-~p~~~d----~~~i~~ia~~~g~~livD~ah~-~Gli~~-~~~~~~~~-~aDiv  308 (529)
                      +.+++.+..   .++.+||+..- . .+...+    +++++++|++||+++|+|+++. +|-... .....-+. ..|++
T Consensus       207 ~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDiv  286 (466)
T PRK07036        207 DEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDII  286 (466)
T ss_pred             HHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEE
Confidence            345555542   23556776532 1 222233    8999999999999999999963 332210 00010111 36888


Q ss_pred             EecccccccCC--CCeEEEeeCCCcchhHHHhhhccc------ccC-CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHH
Q 009673          309 TTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA------VFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV  379 (529)
Q Consensus       309 ~~S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~------~~p-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i  379 (529)
                      +.+  |.++|.  ..|.+++++      ++.+.+...      ... ++.++ +...+++..+.|+.+.++   +..+++
T Consensus       287 t~g--K~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~~~~T~~g-npl~~aaa~a~Le~i~~~---~l~~~~  354 (466)
T PRK07036        287 TFA--KGLTSGYQPLGAVIISE------RLLDVISGPNAKGNVFTHGFTYSG-HPVACAAALKNIEIMERE---GLCEHV  354 (466)
T ss_pred             EEc--cccccCccccEEEEEcH------HHHHHHhcccCcCcccccCCCCCC-CHHHHHHHHHHHHHHHhC---CHHHHH
Confidence            765  999653  467777777      566655321      111 13333 333344444467766543   345666


Q ss_pred             HHHHHHHHHHHHhc-CcEEecC--CCCCceEEEccCCCC-------Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCC
Q 009673          380 VSNCRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMG-------ID---GARVEKILDMASITLNKNSVPGDKSALVP  446 (529)
Q Consensus       380 ~~~a~~l~~~L~~~-G~~v~~~--gt~~~~~~v~~~~~~-------i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~  446 (529)
                      .+..++|.+.|++. .+.++..  |. .-+..+.+....       .+   ...+.+.|.+.||.+..    .      .
T Consensus       355 ~~~g~~l~~~L~~l~~~~~v~~vrG~-Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~----~------~  423 (466)
T PRK07036        355 REVGPYFEERLASLRELPLVGDVRGD-HLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRP----L------E  423 (466)
T ss_pred             HHHHHHHHHHHHHhccCCCEEEEEee-ceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEee----c------C
Confidence            66777777777652 2222211  11 122333332110       11   23466677789999842    1      1


Q ss_pred             CeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          447 GGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       447 ~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      +.+|+..| ++   ++++|++++++.+.+++...
T Consensus       424 ~~~~l~Pp-l~---it~~~id~~~~~l~~al~~~  453 (466)
T PRK07036        424 HLCVLSPP-LI---ITRAQIDEIVAILRAAIEET  453 (466)
T ss_pred             CEEEEeCC-Cc---CCHHHHHHHHHHHHHHHHHH
Confidence            45788644 43   56899999999999998754

>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]

Probab=98.89  E-value=1.3e-06  Score=85.80  Aligned_cols=317  Identities=18%  Similarity=0.200  Sum_probs=164.7

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-----
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-----  188 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-----  188 (529)
                      -.|.+++|+.+... +.+  ..+..+|.  ....+++    +.+.++||-+.     .+-..+|.+|+..++.-.     
T Consensus        76 chpki~~aLqeq~~-kLt--lssrafYn--d~~~~f~----~~vt~lf~~~k-----vlpmnTGaEa~Eta~KLaR~wgy  141 (427)
T KOG1402|consen   76 CHPKIIKALQEQAD-KLT--LSSRAFYN--DVLGEFA----EYVTKLFGYDK-----VLPMNTGAEAVETACKLARKWGY  141 (427)
T ss_pred             CCHHHHHHHHHHHh-Hhh--hhhHHHhh--hhHHHHH----HHHHHhcCcce-----eeecccchhHHHHHHHHHHHHHH
Confidence            47889999887765 321  11212332  2223444    78899999885     244577889988776432     


Q ss_pred             -cC--CCCEEEEcCCCCCccccccccccccccccccce-----EE-EEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          189 -LK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----FE-SMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       189 -l~--pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-----~~-~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                       .+  |.|+-++..-.  +++ ||...  ..+++++..     |. ++|..++ .--.-|.++|+.++++.+...+++..
T Consensus       142 ~~K~ip~nka~il~~~--~nF-hGrT~--~ais~s~d~ds~~~fgp~~P~~~~-~v~Y~d~eale~~l~~~~vaaFivEP  215 (427)
T KOG1402|consen  142 RKKNIPKNKAKILSAE--NNF-HGRTL--GAISLSTDPDSWDGFGPFLPGVVD-KVPYGDAEALEVALKSPNVAAFIVEP  215 (427)
T ss_pred             hhccCCccceeEEEec--ccc-cCcee--eeEEecCCcchhhccCCCCCCcce-eeccCCHHHHHHHhcCCCeeEEEeec
Confidence             12  54544333221  111 22110  122222210     00 0010000 00123678888888774555555542


Q ss_pred             C------CCCCCCCHHHHHHHHHHhCCEEEEeccccccccccccc-CCCCC--cccEEEecccccccCC--CCeEEEeeC
Q 009673          260 S------AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK--YCDVVTTTTHKSLRGP--RGGMIFFKK  328 (529)
Q Consensus       260 s------~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~~~~--~aDiv~~S~hK~l~Gp--rgG~i~~~~  328 (529)
                      -      .-|..--+++.+++|++||+++|.|+.|. |+--.|.. ...-+  ..|++...  |.|.|.  ....+++++
T Consensus       216 IQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQT-Gl~RTGk~la~d~env~PDivilg--KalSGG~~Pvsavl~~~  292 (427)
T KOG1402|consen  216 IQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQT-GLARTGKLLACDYENVRPDIVILG--KALSGGVYPVSAVLADD  292 (427)
T ss_pred             cccccceEeCCchhHHHHHHHHHhhcEEEEehhhhh-cccccCcEEEeehhhcCCCeEEEe--ccccCCeeeeEEEEecH
Confidence            1      11122348999999999999999999974 54322211 00001  35888865  888552  224455555


Q ss_pred             CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEE---ec--CCCC
Q 009673          329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL---VS--GGSD  403 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v---~~--~gt~  403 (529)
                            ++.-.++...-..+.|+.......|+ ++|+.+.+   +...++....-..|+.+|++..-++   +.  .|. 
T Consensus       293 ------~im~~~~pgeHgsTyggNpLg~~vai-Aalevi~e---ekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGr-  361 (427)
T KOG1402|consen  293 ------DIMLNIKPGEHGSTYGGNPLGCAVAI-AALEVIVE---EKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGR-  361 (427)
T ss_pred             ------HHHhccCCCccccccCCChHHHHHHH-HHHHHHHH---HHHHHHHHHHHHHHHHHHHhccccccchhheeecc-
Confidence                  56555655433333343222222222 35665543   2344454455556666776632111   11  111 


Q ss_pred             CceEEE--ccCC-CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          404 NHLVLV--DLRP-MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       404 ~~~~~v--~~~~-~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      ..+..+  +..+ .+.+.-.+.-.|.+.|+...+.         ...-||+.-| ++   ++|+|+++-+++|.+.+
T Consensus       362 Gl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkpt---------H~~IiRfaPP-L~---I~e~dl~eg~e~i~k~i  425 (427)
T KOG1402|consen  362 GLLNAIVINPSKTSGQDAWDVCLALKENGLLAKPT---------HGNIIRFAPP-LV---ISEEDLREGIEAIEKTI  425 (427)
T ss_pred             ceEEEEEeccccccchhHHHHHHcccccccccCCC---------CCCeEEecCC-cc---cCHHHHHHHHHHHHHHh
Confidence            122222  3222 2234445667778888876332         2357999754 44   78999999999998765

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=98.89  E-value=7.7e-07  Score=94.94  Aligned_cols=209  Identities=14%  Similarity=0.145  Sum_probs=113.8

Q ss_pred             CHHHHHHHhhhc--CCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEeccccccccccccc----CCCCC-cc
Q 009673          239 DYDMLEKTAILF--RPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV----ADPFK-YC  305 (529)
Q Consensus       239 D~d~le~~i~~~--~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~----~~~~~-~a  305 (529)
                      +++.+++++..+  +..+||+..  .+.+...+    +++++++|++||+++|+|++| .|+-..|..    ...+. ..
T Consensus       237 ~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~-tGfGrtG~~fa~e~~gv~~~P  315 (464)
T TIGR00699       237 CLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQ-TGVGATGKFWAHEHWNLDDPP  315 (464)
T ss_pred             HHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeee-eCCCCCcchhHHHhcCCCCCC
Confidence            456677777543  345666652  22222344    899999999999999999997 454222210    01111 26


Q ss_pred             cEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Q 009673          306 DVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA  385 (529)
Q Consensus       306 Div~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~  385 (529)
                      |++++  .|.+.|  +|+++.++      .+.. ........+.++ +....++..++|+.+.+.+   ..+++.+..++
T Consensus       316 Di~t~--gK~lg~--gG~~~~~~------~~~~-~~~~~~~~T~~g-np~~~aaa~a~L~~l~~~~---l~~~~~~~g~~  380 (464)
T TIGR00699       316 DMVTF--SKKFQT--AGYFFHDP------AFRP-NKPYRQFNTWMG-DPSRALILREIIQEIKRKD---LLENVAHVGDY  380 (464)
T ss_pred             CEEEe--hhhhcc--CCccccch------hccC-CCCcccccCCCC-CHHHHHHHHHHHHHHHhcC---HHHHHHHHHHH
Confidence            88766  498832  24444332      2211 011111112233 3333444334677665433   34555555667


Q ss_pred             HHHHHHhc--CcE-EecC--C-CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccC
Q 009673          386 LASRLVEL--GYK-LVSG--G-SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTR  459 (529)
Q Consensus       386 l~~~L~~~--G~~-v~~~--g-t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~  459 (529)
                      |.+.|++.  .++ ++..  + ....+.-+.+.... ....+.+.|.+.||.+...         +...|||..| ++  
T Consensus       381 l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~-~~~~i~~~~~~~Gvl~~~~---------g~~~ir~~Pp-l~--  447 (464)
T TIGR00699       381 LYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEA-KRDKLLKKARNNGVNIGGC---------GVKAIRLRPM-LV--  447 (464)
T ss_pred             HHHHHHHHHHhCCCceeeecccCeEEEEEEecCCHH-HHHHHHHHHHHCCcEEecC---------CCCeEEEeCC-CC--
Confidence            77777653  133 2221  1 12233334443211 1345667777889998531         2357999754 43  


Q ss_pred             CCCHHHHHHHHHHHHHHH
Q 009673          460 GFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       460 g~~~~d~~~la~~i~~~~  477 (529)
                       ++++|++++.++|.+++
T Consensus       448 -it~~eid~~~~~l~~~~  464 (464)
T TIGR00699       448 -FQKHHADIFLEIISKII  464 (464)
T ss_pred             -CCHHHHHHHHHHHHHhC
Confidence             67999999999998753

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=98.88  E-value=5.2e-08  Score=99.16  Aligned_cols=315  Identities=16%  Similarity=0.159  Sum_probs=162.4

Q ss_pred             CCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc--CCCCEEEEcCCCCCccccccccccccccc
Q 009673          141 GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVS  218 (529)
Q Consensus       141 ~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~  218 (529)
                      .|+..+..+-......+.+..|+....- +.|.|..-.-.+..++.++-  ..++.|+.+..+|-..        .+.+.
T Consensus        49 ~Gss~~~~ltn~l~~d~~~~~G~~~~~~-~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc--------~kai~  119 (389)
T PF05889_consen   49 AGSSLLAKLTNSLVLDALRLAGLRSVKS-CFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSC--------FKAIE  119 (389)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTHTTHCE-EEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHH--------HHHHH
T ss_pred             cCcHHHHHHHHHHHHHHHHHcCCccccc-eEEEecccccHHHHHHHHHhcccCCceEEEeeccccch--------HHHHH
Confidence            3444444444333345556788874221 23333332244555666663  4678888777654221        24566


Q ss_pred             cccceEEEEEcccCCCCCCCCHHHHHHHhhhcCC--cEEEEcC--CCCCCCCC-HHHHHHHHHHhCCEEEEecccccccc
Q 009673          219 GTSIYFESMPYRLDESTGLVDYDMLEKTAILFRP--KLIIAGA--SAYPRDFD-YPRMRQIADAVGALLMMDMAHISGLV  293 (529)
Q Consensus       219 ~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~p--klIi~~~--s~~p~~~d-~~~i~~ia~~~g~~livD~ah~~Gli  293 (529)
                      .+|....+++--..++.-..|.+.+++.+++...  .+.++++  -.+|+..| +++|++||+++|++.++..|+..-..
T Consensus       120 ~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~  199 (389)
T PF05889_consen  120 RAGLEPVVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSS  199 (389)
T ss_dssp             HTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-H
T ss_pred             hcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHH
Confidence            6665333333222323345678899999876543  3445553  24667555 99999999999999999998654100


Q ss_pred             cc-cccCC--CCCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcccccCCC-CCCChHHHHHHHHHHHHHhcC
Q 009673          294 AA-SVVAD--PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQS  369 (529)
Q Consensus       294 ~~-~~~~~--~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~  369 (529)
                      .. .....  -....|+++-|+-|.|.-|-||.++...+.    .+...+.+. +|+- ..+|....+.    -|..+..
T Consensus       200 ~~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~----~~i~~vs~~-YpGRas~sp~ld~~i----tLl~LG~  270 (389)
T PF05889_consen  200 KCMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDP----SGILAVSKE-YPGRASASPSLDLFI----TLLSLGC  270 (389)
T ss_dssp             HHHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSH----HHHHHHHHT-SHSHBTSHHHHHHHH----HHHHHHH
T ss_pred             HHHHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecCH----HHHHHHHHH-hhhhhhcccchHHHH----HHHHHhh
Confidence            00 00000  001368999999999988888666655431    566666543 3443 2333333222    1222223


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHh----cCcEEecCCCCCceEE-EccCCCC----CcHHHHHHhHhcCCeEEcCCCCCCC
Q 009673          370 PEFKVYQNKVVSNCRALASRLVE----LGYKLVSGGSDNHLVL-VDLRPMG----IDGARVEKILDMASITLNKNSVPGD  440 (529)
Q Consensus       370 ~~~~~~~~~i~~~a~~l~~~L~~----~G~~v~~~gt~~~~~~-v~~~~~~----i~~~~~~~~L~~~GI~v~~~~~Pg~  440 (529)
                      .+|.....+..+.-.++.++|++    .|-.+.. ...||..+ +++....    -+..++...|...||.-.+...|+.
T Consensus       271 ~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~-~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~  349 (389)
T PF05889_consen  271 TGYGALLKERKASFPYLKERLKKWAEEVGERLLE-TPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGG  349 (389)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSS-STT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSS
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC-CCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCC
Confidence            35556666666666667776654    4533332 22455432 3433211    1235677788777775322112221


Q ss_pred             C------CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          441 K------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       441 ~------~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .      +.+...++-+.    .+.|++++|++.+++.|+++++
T Consensus       350 ~~~tsh~~~yp~~Ylt~A----saiG~~~eevd~~v~rL~k~i~  389 (389)
T PF05889_consen  350 KKQTSHSSNYPCPYLTAA----SAIGMTREEVDYFVKRLDKIIK  389 (389)
T ss_dssp             CEEETTSS--SSSEEEEE----E-TT--HHHHHHHHHHHHHHHH
T ss_pred             CcccccCCCCchHHHHHH----HHhCCCHHHHHHHHHHHHHHhC
Confidence            1      11112344441    2368999999999999998874

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=98.87  E-value=2.5e-06  Score=88.94  Aligned_cols=211  Identities=20%  Similarity=0.210  Sum_probs=120.8

Q ss_pred             HHHHHHHhhhcCCc---EEEEcC---CCCCC----CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC------
Q 009673          240 YDMLEKTAILFRPK---LIIAGA---SAYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK------  303 (529)
Q Consensus       240 ~d~le~~i~~~~pk---lIi~~~---s~~p~----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~------  303 (529)
                      .++|+++|..+.|.   ++|+..   ..-+.    ..-++++++||++||+++|+|+. ..|.--.|   ..|.      
T Consensus       200 a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV-~tGFGRTG---~~FA~e~~gi  275 (449)
T COG0161         200 ADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEV-ATGFGRTG---KMFACEHAGI  275 (449)
T ss_pred             HHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecc-eeCCCcCc---hhhhhhhcCC
Confidence            67788888876543   444431   11121    22489999999999999999987 44432212   2221      


Q ss_pred             cccEEEecccccccCC--CCeEEEeeCCCcchhHHHhhhccc----ccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHH
Q 009673          304 YCDVVTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA----VFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQ  376 (529)
Q Consensus       304 ~aDiv~~S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~----~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~  376 (529)
                      -.|+++.+  |.|+|.  ..|.+++++      ++.+.+...    .+.+. .++......+|++ .|+.+.++   ...
T Consensus       276 ~PDi~~~a--KGLT~GY~Pl~a~l~~~------~I~~~~~~~~~~~f~HG~TYsghPlacAaAla-~L~i~e~e---~l~  343 (449)
T COG0161         276 VPDILCLA--KGLTGGYLPLSAVLTSD------RIYEAFSDGDAGAFMHGHTYSGNPLACAAALA-NLDILEEE---DLL  343 (449)
T ss_pred             CCCeeeec--ccccccchhhHhHhhhH------HHHHHHhcccCCeeccCCccccCHHHHHHHHH-HHHHHHhc---CHH
Confidence            25888866  998653  225555555      455544322    22222 2232232333332 46655443   446


Q ss_pred             HHHHHHHHHHHHHHHh--cCcEEecCCC-CCceEEEccCCC-C-Cc------HHHHHHhHhcCCeEEcCCCCCCCCCCCC
Q 009673          377 NKVVSNCRALASRLVE--LGYKLVSGGS-DNHLVLVDLRPM-G-ID------GARVEKILDMASITLNKNSVPGDKSALV  445 (529)
Q Consensus       377 ~~i~~~a~~l~~~L~~--~G~~v~~~gt-~~~~~~v~~~~~-~-i~------~~~~~~~L~~~GI~v~~~~~Pg~~~~~~  445 (529)
                      +++.+...+|.+.|++  .+.+.+.+-. ...+.-+.+... + ..      +..+.+.+.+.|+.+++.   |      
T Consensus       344 ~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~---g------  414 (449)
T COG0161         344 ERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL---G------  414 (449)
T ss_pred             HHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec---C------
Confidence            6777778888888886  2333343211 112222333211 1 01      456778888999999642   2      


Q ss_pred             CCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          446 PGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       446 ~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                       ..+=+.-|.+    .+++|++++.+.+.++++..
T Consensus       415 -~~i~~~PPli----it~~eid~l~~~l~~al~~~  444 (449)
T COG0161         415 -DVIYLMPPLI----ITREEIDELVDALREALDET  444 (449)
T ss_pred             -CEEEEcCCcc----CCHHHHHHHHHHHHHHHHHH
Confidence             2344444433    56899999999999998855

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=98.85  E-value=2.1e-06  Score=91.46  Aligned_cols=209  Identities=19%  Similarity=0.162  Sum_probs=111.4

Q ss_pred             HHHHHHHhhh--cCCcEEEEcC-CCCCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEE
Q 009673          240 YDMLEKTAIL--FRPKLIIAGA-SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVV  308 (529)
Q Consensus       240 ~d~le~~i~~--~~pklIi~~~-s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv  308 (529)
                      ++++++.+..  .++.+||+.. ...++     ...+++|+++|++||+++|+|++|. |+-..|.. . ..+. ..|++
T Consensus       205 l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~a~~~~gv~PDi~  283 (431)
T TIGR03251       205 LRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVQPDIV  283 (431)
T ss_pred             HHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccchHHHHHhcCCCCCEE
Confidence            4555666643  2456777752 12222     2358999999999999999999976 43222210 0 0111 36888


Q ss_pred             EecccccccCCCCeEEEeeCCCcchhHHHhh-hc-ccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 009673          309 TTTTHKSLRGPRGGMIFFKKDPVLGVELESA-IN-NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL  386 (529)
Q Consensus       309 ~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~-i~-~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l  386 (529)
                      +.  .|.+  |-+|++..++ .   .++... .. .....++.++.. ..+++..++|+.+.+.++   .+++.+..++|
T Consensus       284 ~~--gK~~--~~~g~~~~~~-i---~~~~~~~~~~~~~~~~T~~gnp-l~~aaa~a~L~~l~~~~l---~~~~~~~g~~l  351 (431)
T TIGR03251       284 AF--GKKT--QVCGIMAGRR-V---DEVADNVFAVPSRLNSTWGGNL-VDMVRATRILEIIEEERL---VDNARVQGAHL  351 (431)
T ss_pred             Ee--cccC--ccceEEecch-H---HHhhhhcccCccccCCCCCCCH-HHHHHHHHHHHHHHhcCH---HHHHHHHHHHH
Confidence            75  5876  5567775543 0   011111 11 111112233323 334444446776654333   34555556666


Q ss_pred             HHHHHhc--CcE-EecCCC-CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCC
Q 009673          387 ASRLVEL--GYK-LVSGGS-DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS  462 (529)
Q Consensus       387 ~~~L~~~--G~~-v~~~gt-~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~  462 (529)
                      .+.|++.  .+. ++..-+ ...+..+.+.... ....+.+.|.+.||.+..    .     ....+|+..+..    ++
T Consensus       352 ~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~-~~~~~~~~l~~~Gvl~~~----~-----g~~~lr~~P~l~----~t  417 (431)
T TIGR03251       352 LARLHELAAEFPHLVSNPRGRGLMCAFDLPSTA-DRDEVIRQLYREGVLLLG----C-----GERSIRFRPPLT----VT  417 (431)
T ss_pred             HHHHHHHHHhCccceecccccceeEEEEeCCHH-HHHHHHHHHHhCCeEEec----C-----CCCeEEEECCcc----CC
Confidence            6666541  122 222111 1233344443211 234577777889999842    1     235699976543    56


Q ss_pred             HHHHHHHHHHHHH
Q 009673          463 EKEFVAIADFIHE  475 (529)
Q Consensus       463 ~~d~~~la~~i~~  475 (529)
                      ++|++++++.|.+
T Consensus       418 ~~eid~~l~~l~~  430 (431)
T TIGR03251       418 REEIDAAIDAIRR  430 (431)
T ss_pred             HHHHHHHHHHHHh
Confidence            8999999999875

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]

Probab=98.80  E-value=1e-07  Score=96.23  Aligned_cols=237  Identities=18%  Similarity=0.165  Sum_probs=145.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh---cCCC----------CEEEEcCCCCCccccccccccc
Q 009673          148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---LKPH----------DRIMGLDLPHGGHLSHGFMTPK  214 (529)
Q Consensus       148 ~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al---l~pG----------D~Vl~~~~~~~g~~s~g~~~~~  214 (529)
                      .+|..+.....++.|.+...  ..+....|+-+|..++.+-   .-|+          +-|+..+  ..+|+|.-     
T Consensus       141 lmE~~vl~km~~ivGw~~~~--DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtS--eesHYSi~-----  211 (510)
T KOG0629|consen  141 LMEEEVLAKMREIVGWEEGG--DGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTS--EESHYSIK-----  211 (510)
T ss_pred             eehHHHHHHHHHHhCCCCCC--CceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEec--ccchhhHH-----
Confidence            34555556777788888642  2455667776666555543   1122          3444433  23454422     


Q ss_pred             cccccccceE-EEEEcccCCCCCCCCHHHHHHHhhhcC-----CcEEEEc--CCCCCCCCCHHHHHHHHHHhCCEEEEec
Q 009673          215 RRVSGTSIYF-ESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAG--ASAYPRDFDYPRMRQIADAVGALLMMDM  286 (529)
Q Consensus       215 ~~i~~~g~~~-~~v~~~v~~~~~~iD~d~le~~i~~~~-----pklIi~~--~s~~p~~~d~~~i~~ia~~~g~~livD~  286 (529)
                      +...+.|.+. ..+.++.+ +.|.+++++||+.|.+.+     |-++-++  .+.++-..|++.|+++|++|+.|+++|+
T Consensus       212 kaAa~lg~gtd~c~~v~t~-e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDA  290 (510)
T KOG0629|consen  212 KAAAFLGLGTDHCIKVKTD-ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDA  290 (510)
T ss_pred             HHHHHhccCCceeEEeccc-ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeec
Confidence            2334445332 34555555 579999999999987644     3333333  2334447899999999999999999999


Q ss_pred             ccccccccccccCC---CCCcccEEEecccccccCCC-CeEEEeeCCCcchhHHHhhhcc---------------cc---
Q 009673          287 AHISGLVAASVVAD---PFKYCDVVTTTTHKSLRGPR-GGMIFFKKDPVLGVELESAINN---------------AV---  344 (529)
Q Consensus       287 ah~~Gli~~~~~~~---~~~~aDiv~~S~hK~l~Gpr-gG~i~~~~~~~~~~~l~~~i~~---------------~~---  344 (529)
                      |..-|+.-...+..   .++.+|.|+.+.||+++.|- .+.++.+.+     .+...-+.               ..   
T Consensus       291 AwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~-----gll~~Cn~~~A~YLFq~dK~YdvS~DTg  365 (510)
T KOG0629|consen  291 AWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREE-----GLLQRCNQMSAIYLFQQDKFYDVSYDTG  365 (510)
T ss_pred             ccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHH-----HHHHhhcccchhhhhccCceeecccccc
Confidence            97766654332222   22468999999999986554 476666654     22221110               00   


Q ss_pred             cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecC
Q 009673          345 FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG  400 (529)
Q Consensus       345 ~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~  400 (529)
                      .-.+|.|.|.... -++..++--...+|++.+++..+++++|.+.|++. |+..+..
T Consensus       366 dK~iQCGRh~D~F-KlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~  421 (510)
T KOG0629|consen  366 DKAIQCGRHVDVF-KLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFE  421 (510)
T ss_pred             cchhhcCccccHH-HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhc
Confidence            1123555554332 34444554445678999999999999999999984 5565543

>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]

Probab=98.76  E-value=6.4e-07  Score=87.16  Aligned_cols=275  Identities=19%  Similarity=0.218  Sum_probs=157.3

Q ss_pred             eeeecCChHHHHHHHHH--hhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc-CCCCCCCCHHHHHHH
Q 009673          170 VNVQPLSGSPANFEVYT--AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKT  246 (529)
Q Consensus       170 ~~V~~~sGs~A~~~~l~--all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v-~~~~~~iD~d~le~~  246 (529)
                      ..||..||+.|+.....  +-.-+..+|.+..|++..|-.-.        .-.| +..+-.|++ |.++..+|++.+...
T Consensus       101 ~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if--------~~aG-f~tv~~Y~yWd~~~k~~d~e~~Lsd  171 (410)
T KOG1412|consen  101 FGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIF--------EKAG-FTTVATYPYWDAENKCVDLEGFLSD  171 (410)
T ss_pred             cceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHH--------HHcC-CceeeeeeeecCCCceecHHHHHHH
Confidence            35888999988886432  22234667888999988773211        1122 123333443 335568999999888


Q ss_pred             hhhcCC-cEE-EEc-CCCCCC-C----CCHHHHHHHHHHhCCEEEEecccccccccccccCCC--C----C-ccc-EEEe
Q 009673          247 AILFRP-KLI-IAG-ASAYPR-D----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--F----K-YCD-VVTT  310 (529)
Q Consensus       247 i~~~~p-klI-i~~-~s~~p~-~----~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~--~----~-~aD-iv~~  310 (529)
                      ++. .| +.| ++. .-+||+ .    ..+..|++..++.+.+.+.|.| |-|+..++.....  +    + +.. +|+-
T Consensus       172 l~~-APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiA-YQGfASGD~~~DawAiR~fV~~g~e~fv~Q  249 (410)
T KOG1412|consen  172 LES-APEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIA-YQGFASGDLDADAWAIRYFVEQGFELFVCQ  249 (410)
T ss_pred             Hhh-CCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehh-hcccccCCccccHHHHHHHHhcCCeEEEEh
Confidence            876 55 333 333 335665 2    2378889988999999999988 6676544432211  1    1 222 7788


Q ss_pred             cccccc--cCCCCeEE--EeeCCCcchhHHHhh----hccc-ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 009673          311 TTHKSL--RGPRGGMI--FFKKDPVLGVELESA----INNA-VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS  381 (529)
Q Consensus       311 S~hK~l--~GprgG~i--~~~~~~~~~~~l~~~----i~~~-~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~  381 (529)
                      ||.|.+  .+.|.|-+  +.+++. ....+...    ++.. ..|..+|..-.+.+...-.-.++. ....+.+..++.+
T Consensus       250 SFaKNfGlYneRvGnltvv~~n~a-~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W-~~sik~MssRI~~  327 (410)
T KOG1412|consen  250 SFAKNFGLYNERVGNLTVVVNNPA-VIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQW-IQSIKTMSSRIKK  327 (410)
T ss_pred             hhhhhcccccccccceEEEecChh-HHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHH-HHHHHHHHHHHHH
Confidence            999985  67888743  233321 00111111    2211 123223332222221111111111 1234566677777


Q ss_pred             HHHHHHHHHHhcCcEEecCCCCCceE--EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccC
Q 009673          382 NCRALASRLVELGYKLVSGGSDNHLV--LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTR  459 (529)
Q Consensus       382 ~a~~l~~~L~~~G~~v~~~gt~~~~~--~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~  459 (529)
                      .+.+|++.|..+|    ++|+=.|+.  +--+.-.|++...+..+.+.+.|.+-.           .|  ||+..     
T Consensus       328 MR~aLrd~L~aL~----TPGtWDHI~~QiGMFSyTGLtp~qV~~li~~h~vyLl~-----------~G--RInis-----  385 (410)
T KOG1412|consen  328 MRTALRDHLVALK----TPGTWDHITQQIGMFSYTGLTPAQVDHLIENHKVYLLS-----------DG--RINIS-----  385 (410)
T ss_pred             HHHHHHHHHHhcC----CCCcHHHHHhhccceeecCCCHHHHHHHHHhceEEEec-----------CC--cEeee-----
Confidence            7888888887643    344323421  011223477888898888999999832           23  55443     


Q ss_pred             CCCHHHHHHHHHHHHHHHHH
Q 009673          460 GFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       460 g~~~~d~~~la~~i~~~~~~  479 (529)
                      |+....++++|.+|++++..
T Consensus       386 GLN~~NveyVAkAIde~Vr~  405 (410)
T KOG1412|consen  386 GLNMKNVEYVAKAIDETVRA  405 (410)
T ss_pred             ccccccHHHHHHHHHHHHHh
Confidence            45568999999999998874

>PRK12566 glycine dehydrogenase; Provisional

Probab=98.75  E-value=2.2e-06  Score=96.64  Aligned_cols=274  Identities=17%  Similarity=0.093  Sum_probs=156.3

Q ss_pred             HHHHHHHHcCCCCCCCceeeecCChH----HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEE
Q 009673          153 CQKRALAAFNLDENKWGVNVQPLSGS----PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP  228 (529)
Q Consensus       153 a~~~la~~~g~~~~~~~~~V~~~sGs----~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~  228 (529)
                      -+..+++++|++..    |-...-|.    +|+.++...--+...+|++.+-.|+-.+.-   .   .....+.+++++.
T Consensus       129 ~Qtmi~~LtGm~va----NASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v---~---~t~~~~~g~~i~~  198 (954)
T PRK12566        129 FQQMTIDLTGLDLA----NASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSV---L---RTRAEGFGFELVV  198 (954)
T ss_pred             HHHHHHHHhCchhh----hhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHH---H---HHhhhcCCcEEEE
Confidence            35788999999853    22223343    333333222112246788877555322110   0   0001122223332


Q ss_pred             cccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-ccc
Q 009673          229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD  306 (529)
Q Consensus       229 ~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aD  306 (529)
                                  +++++.+.+ ++-.+++.+|++-+ +.|+++|.++++++|+++++ .+   ..+.......|-+ ++|
T Consensus       199 ------------~~~~~~~~~-~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~~-~~---d~laL~ll~~Pge~GAD  261 (954)
T PRK12566        199 ------------DAVDNLAAH-AVFGALLQYPDTHGEIRDLRPLIDQLHGQQALACV-AA---DLLSLLVLTPPGELGAD  261 (954)
T ss_pred             ------------cchhhcCCC-CEEEEEEECCCCceEEccHHHHHHHHHHcCCEEEE-Ee---CHHHHhCCCChhhcCCc
Confidence                        334444444 56678888887665 66999999999999998663 22   2233333444555 899


Q ss_pred             EEEecccc-----cccCCCCeEEEeeCCC-----c-----------------chhHHHhhhcccccCCCCCCChHHHHHH
Q 009673          307 VVTTTTHK-----SLRGPRGGMIFFKKDP-----V-----------------LGVELESAINNAVFPGLQGGPHNHTIGG  359 (529)
Q Consensus       307 iv~~S~hK-----~l~GprgG~i~~~~~~-----~-----------------~~~~l~~~i~~~~~p~~~g~p~~~~iaa  359 (529)
                      |++++.+-     .++||..|++.++++.     +                 .+..-.+.|++-.-....+  ....+.|
T Consensus       262 I~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNIC--T~qaL~A  339 (954)
T PRK12566        262 VVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNIC--TAQVLLA  339 (954)
T ss_pred             EEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhh--HHHHHHH
Confidence            99886553     4688888999998741     0                 0001111222111000011  1223344


Q ss_pred             HHHHH--HHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce--EEEccCCCCCcHHHHHHhHhcCCeEEcCC
Q 009673          360 LAVCL--KHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL--VLVDLRPMGIDGARVEKILDMASITLNKN  435 (529)
Q Consensus       360 la~al--~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~--~~v~~~~~~i~~~~~~~~L~~~GI~v~~~  435 (529)
                      +.+++  -....+++++..+++..++.+|++.|.+.|+++...   .++  +.+++   +.+.+++.+.-.+.||-++..
T Consensus       340 ~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~~---~fF~~~~v~~---~~~~~~~~~~a~~~~~n~r~~  413 (954)
T PRK12566        340 NIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKGIKRLNR---HFFDTLTLEV---GGAQAAIIESAEAARINLRIL  413 (954)
T ss_pred             HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCccccC---CccceEEEEc---cCCHHHHHHHHHHCCCeeEEe
Confidence            43332  233445678889999999999999999999998653   233  33344   113456666666778887642


Q ss_pred             CCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673          436 SVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH  474 (529)
Q Consensus       436 ~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~  474 (529)
                               ..+.+.|++...+    +++|++.+.+.+.
T Consensus       414 ---------~~~~~~~s~de~~----~~~~~~~~~~~f~  439 (954)
T PRK12566        414 ---------GRGRLGVSLDETC----DEATVARLFDIFL  439 (954)
T ss_pred             ---------CCCeEEEEeCCCC----CHHHHHHHHHHhc
Confidence                     1345778877654    4799999999884

>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]

Probab=98.75  E-value=1.6e-06  Score=87.08  Aligned_cols=182  Identities=19%  Similarity=0.251  Sum_probs=108.7

Q ss_pred             CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC----cccEEEecccccc-cCCCCeEEEeeCCCcchhHHHhhhc
Q 009673          267 DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAIN  341 (529)
Q Consensus       267 d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~----~aDiv~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~  341 (529)
                      -+++..++|+++|.++|.|++|. |+--.| +-..|+    -.||++  +.|.+ .|...|.++..+      ++.+-++
T Consensus       234 Ylka~~~~v~k~Ggl~IaDEVqt-GfGRtG-~~wgfe~h~v~PDIvT--mAKgiGnG~Pl~AVvtt~------EIa~v~~  303 (442)
T KOG1404|consen  234 YLKAAYKVVRKRGGLFIADEVQT-GFGRTG-HMWGFESHGVVPDIVT--MAKGIGNGFPLGAVVTTP------EIADVLN  303 (442)
T ss_pred             HHHHHHHHHHHcCCEEEehhhhh-cccccc-ccccccccCCCccHHH--HHhhccCCCcceeeecCH------HHHHHHH
Confidence            48999999999999999999864 332222 222333    246765  45998 455567777777      6777666


Q ss_pred             ccc-cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cCcEEecCCCCCceE----EEccC--
Q 009673          342 NAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGGSDNHLV----LVDLR--  412 (529)
Q Consensus       342 ~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G~~v~~~gt~~~~~----~v~~~--  412 (529)
                      +.. +..+.|+..+...++++ .|+-+.+   ++.+++..+...+|.+.|.+  .+.+++.+-....+.    +++-+  
T Consensus       304 ~~~~~fnTyggnP~a~avg~a-VL~Vike---e~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~  379 (442)
T KOG1404|consen  304 QKSSHFNTYGGNPVACAVGLA-VLKVIKE---ENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSE  379 (442)
T ss_pred             hccccccccCCCchhHHHHHH-HHHHHHH---HhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCC
Confidence            554 23334444444444544 4554433   34455555556677777765  345555431112222    22222  


Q ss_pred             CCC---CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673          413 PMG---IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI  473 (529)
Q Consensus       413 ~~~---i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i  473 (529)
                      +..   --+..+-+.+.+.|+.|+++.+-|       ..+||.-| ++   +|.+|++.+++..
T Consensus       380 ~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G-------~vfriaPP-lc---iT~edi~f~~~~~  432 (442)
T KOG1404|consen  380 PKPPATAEGAVIGEQCKELGVLVGKGGIHG-------NVFRIAPP-LC---ITKEDIDFAVEYF  432 (442)
T ss_pred             CCCcchHHHHHHHHHHHHhCeeeecccccc-------eEEEecCC-ee---ccHHHHHHHHHHH
Confidence            111   113456788899999997765443       37999855 43   6789997777766

>PRK08297 L-lysine aminotransferase; Provisional

Probab=98.74  E-value=7.6e-06  Score=87.34  Aligned_cols=211  Identities=18%  Similarity=0.164  Sum_probs=114.2

Q ss_pred             HHHHHHHhhh--cCCcEEEEcC--CCCCC----CCCHHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEE
Q 009673          240 YDMLEKTAIL--FRPKLIIAGA--SAYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVV  308 (529)
Q Consensus       240 ~d~le~~i~~--~~pklIi~~~--s~~p~----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv  308 (529)
                      ++++++.+..  .++.+||+..  .+.+.    ...+++|+++|++||+++|+|+++. |+--.|..  ..-+. ..|++
T Consensus       212 ~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv  290 (443)
T PRK08297        212 LAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVRPDIV  290 (443)
T ss_pred             HHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCccchHHHHHhcCCCCCEE
Confidence            4556666753  2456777752  12221    2358999999999999999999964 43111110  00011 36888


Q ss_pred             EecccccccCCCCeEEEeeCCCcchhHHH-hhhc-ccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 009673          309 TTTTHKSLRGPRGGMIFFKKDPVLGVELE-SAIN-NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL  386 (529)
Q Consensus       309 ~~S~hK~l~GprgG~i~~~~~~~~~~~l~-~~i~-~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l  386 (529)
                      ++  .|.+  |-+|++..++ .   .++. ..+. .....++.++... .+++..++++.+.++   +..+++.+..+++
T Consensus       291 ~~--gK~l--~~~a~l~~~~-i---~~~~~~~~~~~~~~~~T~~gnpl-~~aaa~a~L~~l~~~---~l~~~~~~~g~~l  358 (443)
T PRK08297        291 AF--GKKT--QVCGIMAGRR-V---DEVEDNVFAVSSRINSTWGGNLV-DMVRARRILEVIEED---GLVENAARQGEYL  358 (443)
T ss_pred             Ee--cccc--cccceecchH-H---HHhhhhhccCccccCCCCCccHH-HHHHHHHHHHHHHhc---CHHHHHHHHHHHH
Confidence            75  5987  3456665543 0   0111 1111 0111122333233 333333456655443   3455666667777


Q ss_pred             HHHHHhc--CcEEe---cCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCC
Q 009673          387 ASRLVEL--GYKLV---SGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF  461 (529)
Q Consensus       387 ~~~L~~~--G~~v~---~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~  461 (529)
                      .+.|++.  .++.+   ..+. ..++.+.+.... ....+.+.|.+.||.+.    |.     ....+||..+ ++   +
T Consensus       359 ~~~L~~l~~~~~~~~~~vrg~-G~~~~i~~~~~~-~~~~~~~~l~~~Gvl~~----~~-----~~~~lr~~P~-l~---~  423 (443)
T PRK08297        359 LARLEELAAEFPAVVSNVRGR-GLMCAFDLPTTA-DRDEVIRRLWEEGVLVL----PC-----GERSIRFRPA-LT---V  423 (443)
T ss_pred             HHHHHHHHHHCCCcceeeecc-ceEEEEEecCHH-HHHHHHHHHHHCCEEEe----cC-----CCCeEEEECC-cc---C
Confidence            7777552  12211   1121 334445553211 23456677778999983    32     1356898644 33   6


Q ss_pred             CHHHHHHHHHHHHHHHH
Q 009673          462 SEKEFVAIADFIHEGVE  478 (529)
Q Consensus       462 ~~~d~~~la~~i~~~~~  478 (529)
                      +++|++++++.+.+++.
T Consensus       424 t~~eid~~l~~l~~~l~  440 (443)
T PRK08297        424 TTEEIDAAIDALRRALP  440 (443)
T ss_pred             CHHHHHHHHHHHHHHHH
Confidence            79999999999998875

>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]

Probab=98.69  E-value=1.1e-06  Score=85.40  Aligned_cols=340  Identities=14%  Similarity=0.157  Sum_probs=190.0

Q ss_pred             CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH-HHHhhcC
Q 009673          112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE-VYTAILK  190 (529)
Q Consensus       112 n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~-~l~all~  190 (529)
                      ..+|+.+.+.+...| ++|+.-.....+.|-.+|+.- .+-+...++.+.|+..+++.    +.+.-.+|.. .+.++.+
T Consensus        77 GLmPK~t~~~~~~eL-DkWak~av~gH~~GkvPW~~~-De~il~l~~~iVGA~e~Eva----vmNsLTvNlh~Ll~sFyK  150 (465)
T KOG3846|consen   77 GLMPKSTRNSINAEL-DKWAKCAVEGHFKGKVPWVSI-DEPILPLLAPIVGAQENEVA----VMNSLTVNLHSLLISFYK  150 (465)
T ss_pred             ccCchhhHhHHHHHH-HHHHhhhhhcccccccceeec-chhhhhhhhhhccCCchhhh----hHhhhhhHHHHHHHHhcC
Confidence            357899988888776 455431111111222233321 12344677889999887542    2333345554 4557777


Q ss_pred             CCC---EEEEcCCCCCccccccccccccccccccceEEEEEcccCCC--CCCCCHHHHHHHhhhcCCc--EEEEcCCCCC
Q 009673          191 PHD---RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAILFRPK--LIIAGASAYP  263 (529)
Q Consensus       191 pGD---~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~--~~~iD~d~le~~i~~~~pk--lIi~~~s~~p  263 (529)
                      |-.   +|+.   +..+..+..|..+ ..+...|...+-..+.+.+.  ...+..+++.+.|+.+.-.  +|+++...|-
T Consensus       151 PTekR~KILl---E~kaFPSDhYAie-sQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyY  226 (465)
T KOG3846|consen  151 PTEKRFKILL---EKKAFPSDHYAIE-SQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYY  226 (465)
T ss_pred             Ccchhhhhhh---ccCCCCchHHHHH-hhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceee
Confidence            754   4553   3344444444322 23344444222112222222  2467788888888774433  3444444433


Q ss_pred             C--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccc-cCCCC-eEEEeeCCC---------
Q 009673          264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL-RGPRG-GMIFFKKDP---------  330 (529)
Q Consensus       264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l-~Gprg-G~i~~~~~~---------  330 (529)
                      +  .+|+.+|..--+..|++|=.|-||+.|-+....+..   ++|+.+....|.+ +|+.| |-+++..+.         
T Consensus       227 TGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdW---gVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~  303 (465)
T KOG3846|consen  227 TGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDW---GVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLA  303 (465)
T ss_pred             cccccchhhhhhcccCCCcEechhhhhhhcCCceEEeec---CCceEEEeeecccccCCCccceeeeehhhhcchhhHHh
Confidence            3  678988886666679999999999998775444444   5899999999988 56655 555555431         


Q ss_pred             cch-hHHHhhh--c------ccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCc-----
Q 009673          331 VLG-VELESAI--N------NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGY-----  395 (529)
Q Consensus       331 ~~~-~~l~~~i--~------~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~-----  395 (529)
                      ++| .+..+++  +      .....+-+++|.....+|+-.+|+.......++.+++..-...+|...++. .|.     
T Consensus       304 GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~r  383 (465)
T KOG3846|consen  304 GWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLR  383 (465)
T ss_pred             hhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhh
Confidence            111 1222221  1      112223367888888888888887654333444444444434433333332 232     


Q ss_pred             ------EEecCC-CC--CceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEcc-CCCccCCCCHHH
Q 009673          396 ------KLVSGG-SD--NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS-PAMTTRGFSEKE  465 (529)
Q Consensus       396 ------~v~~~g-t~--~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~-~~~tt~g~~~~d  465 (529)
                            .++++. ++  .-...+-+..   +...+...|.++|+.+++.         .|.+||+.- |-+++    -.|
T Consensus       384 t~Kl~~~IiTP~~~~erGcQLsl~Fss---p~~~vfqeL~krGv~~DkR---------~PNvIRvAPvpLYN~----f~D  447 (465)
T KOG3846|consen  384 TEKLFFTIITPTSTDERGCQLSLYFSS---PTPKVFQELHKRGVIGDKR---------RPNVIRVAPVPLYNT----FSD  447 (465)
T ss_pred             hcceeEEEeCCcccccccceEEEEeCC---CchHHHHHHHHcCeecccc---------CCCceEeecchhhcc----HHH
Confidence                  233331 10  0111121221   2367888999999998764         468899864 44444    588


Q ss_pred             HHHHHHHHHHHHHHH
Q 009673          466 FVAIADFIHEGVEIT  480 (529)
Q Consensus       466 ~~~la~~i~~~~~~~  480 (529)
                      +......+.+++.+.
T Consensus       448 vy~f~n~L~e~~d~~  462 (465)
T KOG3846|consen  448 VYIFVNALNEAMDKL  462 (465)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            888888888877643

>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]

Probab=98.67  E-value=9.2e-07  Score=87.27  Aligned_cols=351  Identities=19%  Similarity=0.206  Sum_probs=197.5

Q ss_pred             hhcccCChHHHHHHHHHHHHhh--cceeEecC-------CCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHH
Q 009673           81 YSLGEADPEVCEIITKEKERQF--KSLELIAS-------ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELET  151 (529)
Q Consensus        81 ~~l~~~d~~~~~~~~~e~~~~~--~~i~L~as-------en~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~  151 (529)
                      +.+.-.+|+..-=+.+..++..  .-|||.++       ..++-+.|++|-.........--|      ..-.-+.++..
T Consensus        29 s~V~maPpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEY------lpI~Gl~eF~k  102 (427)
T KOG1411|consen   29 SHVEMAPPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEY------LPITGLAEFNK  102 (427)
T ss_pred             hcCCCCCCCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchh------ccccchHHHHH
Confidence            4455556663222222233332  34777753       235678888887644431111111      11112334443


Q ss_pred             HHHHHHHHHcCCCCC-----CCceeeecCChHHHHH--HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceE
Q 009673          152 LCQKRALAAFNLDEN-----KWGVNVQPLSGSPANF--EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF  224 (529)
Q Consensus       152 ~a~~~la~~~g~~~~-----~~~~~V~~~sGs~A~~--~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~  224 (529)
                      ++.   +=+||-+.+     .+ +.||..|||.|+-  +-+.+..-|+..|.+++|+++.|..        -....|...
T Consensus       103 ~sa---kLa~G~~s~~ik~~Ri-~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~--------if~~ag~~~  170 (427)
T KOG1411|consen  103 LSA---KLALGDNSPVIKEKRI-VTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKN--------IFKDAGLPV  170 (427)
T ss_pred             HHH---HHhhcCCchhhhccce-eEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCc--------cccccCcce
Confidence            332   234565432     22 5688899986554  4566666789999999999988742        112344433


Q ss_pred             EEEEcccCCCCCCCCHHHHHHHhhhcCCc-EEEEc-CCCCCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccc
Q 009673          225 ESMPYRLDESTGLVDYDMLEKTAILFRPK-LIIAG-ASAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV  297 (529)
Q Consensus       225 ~~v~~~v~~~~~~iD~d~le~~i~~~~pk-lIi~~-~s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~  297 (529)
                      +...| .++++..+|++.+.+.+.+.-.. .|++- .-+||+     ...+++|.++.++.+.+-+.|+| |-|+-.++.
T Consensus       171 ~~yrY-yd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmA-YQGfaSG~~  248 (427)
T KOG1411|consen  171 KFYRY-YDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMA-YQGFASGDL  248 (427)
T ss_pred             eeeee-ccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhh-hcccccCCc
Confidence            33333 35677889999987777762233 33332 345555     33588999999999999999998 666554432


Q ss_pred             cCCC-----C--Cccc-EEEecccccc--cCCCCeEE--EeeCCCcchhHHHhhhc----ccccCCCCCCChHH--HHHH
Q 009673          298 VADP-----F--KYCD-VVTTTTHKSL--RGPRGGMI--FFKKDPVLGVELESAIN----NAVFPGLQGGPHNH--TIGG  359 (529)
Q Consensus       298 ~~~~-----~--~~aD-iv~~S~hK~l--~GprgG~i--~~~~~~~~~~~l~~~i~----~~~~p~~~g~p~~~--~iaa  359 (529)
                      ...-     |  .+-+ ++.-|+-|.|  .|-|.|.+  ++++.     +...+++    ..+.| .+++|..|  .|++
T Consensus       249 d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~a-----d~A~rV~SQlk~liRp-mYSnPP~hGArIv~  322 (427)
T KOG1411|consen  249 DKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDA-----DEAKRVESQLKILIRP-MYSNPPLHGARIVA  322 (427)
T ss_pred             hhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCH-----HHHHHHHHHHHHHhcc-cccCCCccchhhhh
Confidence            2111     1  1333 5678999986  56677653  44443     3433332    22223 23444433  3333


Q ss_pred             HHHH---HHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEe-cCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCC
Q 009673          360 LAVC---LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV-SGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKN  435 (529)
Q Consensus       360 la~a---l~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~-~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~  435 (529)
                      ....   |+.--..+.+-+..+++..++.|.+.|...|-... ..-+ ..+-++.+  .|++.++++.+-.++.|...+.
T Consensus       323 ~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~-~QIGMF~f--Tgl~peQv~~l~ke~~iYmT~d  399 (427)
T KOG1411|consen  323 TILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPGNWSHIT-KQIGMFCF--TGLNPEQVDWLTKEYHIYLTKD  399 (427)
T ss_pred             hccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHH-Hhhheeee--cCCCHHHHHHHHhhheeeeccC
Confidence            2211   11100123466778888888888888887654320 0000 01122222  4677889988889999987432


Q ss_pred             CCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          436 SVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       436 ~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                                   -|||...++     ...+.+++++|+.+.+
T Consensus       400 -------------GRiS~aG~s-----s~nV~yLa~aih~vtk  424 (427)
T KOG1411|consen  400 -------------GRISMAGLS-----SSNVPYLADAIHAVTK  424 (427)
T ss_pred             -------------ceEeecccc-----ccCCcccchhhHhHhc
Confidence                         277765544     4778899999987754

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=98.62  E-value=2e-05  Score=89.37  Aligned_cols=213  Identities=14%  Similarity=0.052  Sum_probs=112.9

Q ss_pred             HHHHHHhhh-------cCCcEEEEcCC--CC-CCC----CCHHHHHHHHHHhCCEEEEecccccccccccc-cC-CCCC-
Q 009673          241 DMLEKTAIL-------FRPKLIIAGAS--AY-PRD----FDYPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-  303 (529)
Q Consensus       241 d~le~~i~~-------~~pklIi~~~s--~~-p~~----~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~-~~~~-  303 (529)
                      +.+++.+..       .+..+||+..-  .. +..    .-+++++++|++||+++|+|+.+ .|+--.|. .. .-+. 
T Consensus       567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~-TGfGRtG~~fa~e~~gv  645 (817)
T PLN02974        567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVF-TGLWRLGVESAWELLGC  645 (817)
T ss_pred             HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecc-cCCCcccchhhHHhcCC
Confidence            456666642       23456666531  22 221    23789999999999999999984 45422221 00 0111 


Q ss_pred             cccEEEecccccccCC--CCeEEEeeCCCcchhHHHhhhcc-----cccCC-CCCCChHHHHHHHHHHHHHhcCchH-HH
Q 009673          304 YCDVVTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINN-----AVFPG-LQGGPHNHTIGGLAVCLKHAQSPEF-KV  374 (529)
Q Consensus       304 ~aDiv~~S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~-----~~~p~-~~g~p~~~~iaala~al~~~~~~~~-~~  374 (529)
                      ..||++.+  |.|+|.  ..|.+++++      ++.+.+..     ..+.+ .+++ |....++..++|+.+.+++. ..
T Consensus       646 ~PDIi~~g--KgLtgG~~Plaa~l~~~------~I~~~f~~~~~~~~~~hg~Ty~g-npl~cAaala~L~~~~~~~~~~~  716 (817)
T PLN02974        646 KPDIACYA--KLLTGGLVPLAATLATE------EVFEAFRGPSKLDALLHGHSYTA-HPMGCAAAAKALQWYKDPSTNPN  716 (817)
T ss_pred             CCCEEeec--ccccCCCCccEEEEEcH------HHHHhhccccccCCcccCCCCCc-CHHHHHHHHHHHHHHHcccHHHH
Confidence            36899877  999653  567777877      56655531     11122 2333 33333333346777665432 22


Q ss_pred             HHHHHHHHHHHHHHHHHh--cCcEEecCCC-CCceEEEccCCC----CCc---HHHHHHhHh-cCCeEEcCCCCCCCCCC
Q 009673          375 YQNKVVSNCRALASRLVE--LGYKLVSGGS-DNHLVLVDLRPM----GID---GARVEKILD-MASITLNKNSVPGDKSA  443 (529)
Q Consensus       375 ~~~~i~~~a~~l~~~L~~--~G~~v~~~gt-~~~~~~v~~~~~----~i~---~~~~~~~L~-~~GI~v~~~~~Pg~~~~  443 (529)
                      ..++..+....+.+.|.+  ..++.+.+-. ..-+.-+.+...    +.+   +..+.+.+. +.||.+...        
T Consensus       717 l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~--------  788 (817)
T PLN02974        717 LIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL--------  788 (817)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec--------
Confidence            233333333334444421  1122222100 112223333211    111   234666666 899998531        


Q ss_pred             CCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          444 LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       444 ~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                        .+.||+-.|.++    ++++++++.+.|.+.+
T Consensus       789 --Gnvi~l~pP~~i----~~e~l~~~~~~l~~~~  816 (817)
T PLN02974        789 --GNVVYLMCGPTT----SPETCTRLLRKVYRRL  816 (817)
T ss_pred             --CCEEEEeCCCCC----CHHHHHHHHHHHHHHh
Confidence              246888766655    4899999999998765

>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=98.48  E-value=5.3e-05  Score=76.90  Aligned_cols=250  Identities=18%  Similarity=0.190  Sum_probs=127.7

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---  189 (529)
                      ...|+|.+++..-+ .+..+-..+  ++.    ...++  +.+.+.+..+-...+  -.....|||+||..++..-.   
T Consensus        72 hanpev~ral~~q~-~k~~hs~~~--~~t----~eav~--l~~~l~~~~~~~~~~--rvff~nsGTeAne~ALK~Ark~~  140 (433)
T KOG1401|consen   72 HANPEVARALAEQA-KKLGHSSNG--YFT----LEAVE--LEEVLSAVLGKGSAE--RVFFCNSGTEANETALKFARKFT  140 (433)
T ss_pred             CCCHHHHHHHHHHH-hhheeccCc--ccc----HHHHH--HHHHHHhcccCCCcc--EEEEecCCcHHHHHHHHHHHHhh
Confidence            44788888887654 233221111  111    11222  235555555332211  12346899999998875332   


Q ss_pred             ---CCCCE--EEEcCCCCCccccccccccccccccccceEEEEEcccCCCC---CCCCHHHHHHHhhhcC--CcEEEEcC
Q 009673          190 ---KPHDR--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST---GLVDYDMLEKTAILFR--PKLIIAGA  259 (529)
Q Consensus       190 ---~pGD~--Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~---~~iD~d~le~~i~~~~--pklIi~~~  259 (529)
                         .|-++  ++.+.-.|-|+- .|..... ..+..+..+++    +.++-   ..-|..++++.+..++  ..+||+..
T Consensus       141 ~~~~~~~~t~~Iaf~nsyHG~t-lgals~~-~~s~y~~~~~p----~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEP  214 (433)
T KOG1401|consen  141 GKKHPEKKTKFIAFENSYHGRT-LGALSVT-GNSKYGLPFDP----IAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEP  214 (433)
T ss_pred             cccCCccceeEEEEecCcCCcc-hhHHHhh-cccccCCCCCC----CCCceeecccCCHHHHHHHHHhCCCceEEEEEec
Confidence               23333  777765543321 1110000 00111111111    11111   2347899999998865  34566642


Q ss_pred             -CCCCCCCC-----HHHHHHHHHHhCCEEEEecccccccccccc--cCCCCC-cccEEEeccccccc-CCCCeEEEeeCC
Q 009673          260 -SAYPRDFD-----YPRMRQIADAVGALLMMDMAHISGLVAASV--VADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKD  329 (529)
Q Consensus       260 -s~~p~~~d-----~~~i~~ia~~~g~~livD~ah~~Gli~~~~--~~~~~~-~aDiv~~S~hK~l~-GprgG~i~~~~~  329 (529)
                       -..++..|     +..|+++|+++|++||.|+.+. |+--.+.  ...-+. ..||.+..  |.|+ |...|...+++ 
T Consensus       215 iqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~t-G~gR~g~~~a~e~~~~~PDI~t~a--K~L~gGlPigA~~v~~-  290 (433)
T KOG1401|consen  215 IQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQT-GLGRLGYGWAQEYFGVTPDITTVA--KPLGGGLPIGATGVRD-  290 (433)
T ss_pred             ccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhh-CccccchHHHHHHhCcCCcceeeh--hhccCCceeEEEeehH-
Confidence             23333222     5678899999999999999853 3321111  011111 35887765  9884 45668888888 


Q ss_pred             CcchhHHHhhhccccc---CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673          330 PVLGVELESAINNAVF---PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE  392 (529)
Q Consensus       330 ~~~~~~l~~~i~~~~~---p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~  392 (529)
                           ++.+.++...-   .+..++ +.....+...+++++.++++   .+++.+..+.|++.|.+
T Consensus       291 -----kV~~~i~~~~~l~hg~Tf~g-npLacsa~~~~l~~l~~~e~---~k~vs~~~k~L~~~l~e  347 (433)
T KOG1401|consen  291 -----KVAEMISPGDHLYHGGTFSG-NPLACSAGIKVLDELKDPET---LKNVSKIGKELRKLLDE  347 (433)
T ss_pred             -----HHHhhcCCCCccccCcccCC-ChhhhhHHHHHHHHHcCHHH---HHHHHHHHHHHHHHHHH
Confidence                 67777765432   111222 22233333456777776554   44455555555555544

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=98.31  E-value=5.3e-05  Score=78.07  Aligned_cols=256  Identities=14%  Similarity=0.076  Sum_probs=123.2

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---  189 (529)
                      +-.|++.+++...+... ....+. . + .++   ...++ .+++.+.++-..+   -.....||++|+..++....   
T Consensus        32 h~~p~i~~ai~~~~~~~-~~~~~~-~-~-~~~---~~~~l-a~~L~~~~p~~~~---~v~f~~sGseAve~Alkla~~~~  100 (339)
T PF00202_consen   32 HNHPEIAEAIAEQANKL-NYVSFS-G-F-THP---EAAEL-AEKLAELFPGGLD---RVFFANSGSEAVEAALKLARQYH  100 (339)
T ss_dssp             BT-HHHHHHHHHHHHHC-SSCSTT-T-S-EEH---HHHHH-HHHHHHHSSTTEE---EEEEESSHHHHHHHHHHHHHHHH
T ss_pred             CCccccchhHHHHhhhc-cccccc-c-e-ecc---chhhh-hhhhhhccccccc---eeeeccCchHHHHHHHHHhhccc
Confidence            34688888888766432 211111 0 1 112   22222 3777888833222   23446899999998886443   


Q ss_pred             ----CCC-CEEEEcCCCCCccccc-----cccccccccccccceEEEEEcccCCC--CCCCCHHHHHHHhh---hcCCcE
Q 009673          190 ----KPH-DRIMGLDLPHGGHLSH-----GFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAI---LFRPKL  254 (529)
Q Consensus       190 ----~pG-D~Vl~~~~~~~g~~s~-----g~~~~~~~i~~~g~~~~~v~~~v~~~--~~~iD~d~le~~i~---~~~pkl  254 (529)
                          .+| .+|+...-.|-|.-..     +....++........+..++++-...  ...-..+++++.+.   ..+..+
T Consensus       101 ~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaa  180 (339)
T PF00202_consen  101 NKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAA  180 (339)
T ss_dssp             HHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEE
T ss_pred             ccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEE
Confidence                233 6888777554332100     00000000000001112223221000  00001122333332   223456


Q ss_pred             EEEcCC-CC-CC----CCCHHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEecccccccC-CCCeEE
Q 009673          255 IIAGAS-AY-PR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG-PRGGMI  324 (529)
Q Consensus       255 Ii~~~s-~~-p~----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l~G-prgG~i  324 (529)
                      ||+..- .. +.    ..-+++|+++|++||+++|+|+.+. |+--.|..-  .... ..|+++++  |.++| ...|.+
T Consensus       181 vivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~t-G~gRtG~~~a~~~~gv~PDiv~~g--K~l~gG~p~sav  257 (339)
T PF00202_consen  181 VIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQT-GFGRTGKFFASEHYGVDPDIVTFG--KGLGGGLPISAV  257 (339)
T ss_dssp             EEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTT-TTTTTSSSSGHHHHTSSSSEEEEE--GGGGTTSSEEEE
T ss_pred             EEEeccccccCccccccchhhehcccccccccceecccccc-cccccCCccceecccccCcccccc--cchhhhhhcccc
Confidence            777632 11 11    2337999999999999999999854 432111100  0001 36999987  99954 444888


Q ss_pred             EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673          325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE  392 (529)
Q Consensus       325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~  392 (529)
                      ++++      ++.+.+.......+.++... .+++....|+.+.+++   +.+++.+..++|.+.|++
T Consensus       258 ~~~~------~i~~~~~~~~~~~T~~g~p~-~~aaa~~~l~~~~~~~---~~~~~~~~g~~l~~~L~~  315 (339)
T PF00202_consen  258 LGSE------EIMEAFQPGSHGSTFGGNPL-SCAAALATLEILEEED---LLERVRELGERLREGLRE  315 (339)
T ss_dssp             EEEH------HHHTTSCTTSSTCTTTT-HH-HHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHH
T ss_pred             cccc------hhhccccccccccccccchH-hhhhhhhHHHhhccHH---HHHHHHHHHHHHHHHHHH
Confidence            8888      67776644333333444333 3333333566655433   345555556666666654

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]

Probab=98.20  E-value=0.00055  Score=66.78  Aligned_cols=339  Identities=18%  Similarity=0.182  Sum_probs=169.6

Q ss_pred             cceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673          103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF  182 (529)
Q Consensus       103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~  182 (529)
                      +.|+-.+--.-..|+|.+|....+..-    ....||     ..|++-+-++...+.+-+++     +...++|||+||.
T Consensus        51 DCInNVaHvghchp~VV~A~~kQmat~----~tN~RF-----lhd~lv~cA~~l~stlPeLs-----vc~F~NSGSEAND  116 (452)
T KOG1403|consen   51 DCINNVAHVGHCHPEVVRAGAKQMATI----STNNRF-----LHDELVQCARTLTSTLPELS-----VCFFVNSGSEAND  116 (452)
T ss_pred             HHhhhhhhcccCCHHHHHHHHHHHhHh----cccchh-----hHHHHHHHHHHHhhcCCCce-----EEEEecCCchhhH
Confidence            456555555556788888876554311    122333     23555544444344444433     4566799999999


Q ss_pred             HHHHhh--cCCCCEEEEcCCCCCcccccccccccccccccc-----ceEEEEEccc------C----C--CCCCCCHHHH
Q 009673          183 EVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-----IYFESMPYRL------D----E--STGLVDYDML  243 (529)
Q Consensus       183 ~~l~al--l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g-----~~~~~v~~~v------~----~--~~~~iD~d~l  243 (529)
                      +++.-.  .....-|++++..|-||++.-.....-+...-+     -++.+-|.|=      .    +  +-+..-.|.+
T Consensus       117 LALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~v  196 (452)
T KOG1403|consen  117 LALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPV  196 (452)
T ss_pred             HHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHH
Confidence            888754  234445666777777776532110000000000     1112222210      0    0  0011123456


Q ss_pred             HHHhhhc--CCcEE---EEc--CCCCCCCC----CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC----cccEE
Q 009673          244 EKTAILF--RPKLI---IAG--ASAYPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVV  308 (529)
Q Consensus       244 e~~i~~~--~pklI---i~~--~s~~p~~~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~----~aDiv  308 (529)
                      ++++.+-  +-..|   |..  .|..+.++    -++++++-.+.+|-..|.|+.|. |+--.|.+.+.+.    -.|||
T Consensus       197 k~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQv-GFGRvG~hyWafq~y~fiPDIV  275 (452)
T KOG1403|consen  197 KEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQV-GFGRVGSHYWAFQTYNFIPDIV  275 (452)
T ss_pred             HHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhh-cccccchhhhhhhhhccccchh
Confidence            6666532  11111   211  12222222    36777778888999999999874 3222233334343    25787


Q ss_pred             Eecccccc-cCCCCeEEEeeCCCcchhHHHhhhcccc--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Q 009673          309 TTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA  385 (529)
Q Consensus       309 ~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~  385 (529)
                      +..  |.+ .|...+.++..+      ++.+.+...-  +....|+.......+++ .++.+..+.+.+..+++   -.+
T Consensus       276 tmg--KpmGNGhPVa~Vattk------eIA~Af~atgv~YFNTyGGnPVsCAv~la-Vm~v~e~E~Lq~ha~~v---G~~  343 (452)
T KOG1403|consen  276 TMG--KPMGNGHPVAAVATTK------EIAQAFHATGVEYFNTYGGNPVSCAVGLA-VMRVCEDENLQEHAQQV---GEK  343 (452)
T ss_pred             eec--ccCCCCCeeeEEeccH------HHHHHhccccceehhccCCCchhHHHHHH-HHHHHhhhhHHHHHHHH---HHH
Confidence            755  877 566668888887      6777665421  22234554454444444 35554443333333333   333


Q ss_pred             HHHHHHh--cCcEEecCCCCCceEE-EccCCCC---C-cH---HHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccC
Q 009673          386 LASRLVE--LGYKLVSGGSDNHLVL-VDLRPMG---I-DG---ARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSP  454 (529)
Q Consensus       386 l~~~L~~--~G~~v~~~gt~~~~~~-v~~~~~~---i-~~---~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~  454 (529)
                      |...|++  ...+++.+-..-.++| +|+-...   . +.   ..+...| +.++|.++.- -|      ....+.|--|
T Consensus       344 L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaD-GP------h~NilKiKPP  416 (452)
T KOG1403|consen  344 LEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSAD-GP------HRNILKIKPP  416 (452)
T ss_pred             HHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecC-CC------CCceeecCCC
Confidence            4444433  2345554311122222 3442111   1 11   2244555 4578998643 12      2345666533


Q ss_pred             CCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          455 AMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       455 ~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                       ++   +++++.++.+..+++++..
T Consensus       417 -mC---Fneena~e~v~~ld~iLT~  437 (452)
T KOG1403|consen  417 -MC---FNEENADEFVLGLDEILTV  437 (452)
T ss_pred             -cc---cChhhHHHHHHHHHHHHHH
Confidence             43   7799999999999998873

>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=98.14  E-value=3.4e-05  Score=77.04  Aligned_cols=281  Identities=13%  Similarity=0.086  Sum_probs=138.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCC----C--CEEEEcCCCCCccccccccccccccc
Q 009673          146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKP----H--DRIMGLDLPHGGHLSHGFMTPKRRVS  218 (529)
Q Consensus       146 ~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~p----G--D~Vl~~~~~~~g~~s~g~~~~~~~i~  218 (529)
                      ..+||+.+ +++-++.|-...+= -.|.+.+|+ +.+.+++.||..+    +  -.|+...|-|....     .   ...
T Consensus        45 s~eL~~~I-r~LH~~VGNAvt~g-r~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~-----~---qt~  114 (363)
T PF04864_consen   45 SPELERQI-RRLHRVVGNAVTDG-RYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYP-----E---QTD  114 (363)
T ss_dssp             -HHHHHHH-HHHHHHH-SB--TT-SEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHH-----H---HCC
T ss_pred             cHHHHHHH-HHHHHHhccccccC-cEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchH-----H---HHH
Confidence            45777654 56777776532111 135568887 8888888888422    2  26776666443221     1   111


Q ss_pred             c-ccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE-EEcCCCCCCCCCHHHHHH-HHHHhCCEEEEecccccccccc
Q 009673          219 G-TSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI-IAGASAYPRDFDYPRMRQ-IADAVGALLMMDMAHISGLVAA  295 (529)
Q Consensus       219 ~-~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI-i~~~s~~p~~~d~~~i~~-ia~~~g~~livD~ah~~Gli~~  295 (529)
                      + .+..++.   .=|...+. +-        +.....| ++++||||.-    .|.+ +.+.-+..+|.|-|+|--..  
T Consensus       115 ~f~s~~y~w---~Gda~~~~-~~--------~~~~~~IElVTSPNNPDG----~lr~~V~~g~~~k~I~D~AYYWPhy--  176 (363)
T PF04864_consen  115 FFDSRLYKW---AGDASNFK-NS--------DNPSPYIELVTSPNNPDG----QLREAVLNGSSGKVIHDLAYYWPHY--  176 (363)
T ss_dssp             CT-BTTEEE---EEECCCGT-T---------S-CCGEEEEEESS-TTT----------SSTTTEEEEEEE-TT-STTT--
T ss_pred             hccccCccc---cccHHhhc-cC--------CCCCCeEEEEeCCCCCcc----cccchhcCCCCcceeeeeeeecccc--
Confidence            1 1111111   11212221 10        0012334 5778999851    1121 33455667899998664321  


Q ss_pred             cccCCCCC---cccEEEeccccc--ccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc--
Q 009673          296 SVVADPFK---YCDVVTTTTHKS--LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ--  368 (529)
Q Consensus       296 ~~~~~~~~---~aDiv~~S~hK~--l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~--  368 (529)
                          .|+.   .-||+.+|++|.  .+|.|.||.+++++     ++.+++...+.-...|...-.++-++- -|+.+.  
T Consensus       177 ----TpI~~~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~-----~Va~kM~~y~~lnTiGvS~dsQLRa~k-iLk~v~~~  246 (363)
T PF04864_consen  177 ----TPITAPADHDIMLFTLSKLTGHAGSRFGWALVKDE-----EVAKKMTKYMELNTIGVSRDSQLRALK-ILKVVLDG  246 (363)
T ss_dssp             ----S---S-B--SEEEEEHHHHCS-GGG-EEEEEES-H-----HHHHHHHHHHHHHCSS--HHHHHHHHH-HHHHHHHH
T ss_pred             ----cccCCCCCCceEEEEEecccCccccccceeeecCH-----HHHHHHHHHHHHhcccCcHHHHHHHHH-HHHHHHhc
Confidence                2222   347999999996  36788899999986     677766544333334554444554432 122211  


Q ss_pred             --Cc----hHHHHH-HHHHHHHHHHHHHHHhc-CcEEec--CC----------CCCceEEEccCCCCCcHHHHHHhHhcC
Q 009673          369 --SP----EFKVYQ-NKVVSNCRALASRLVEL-GYKLVS--GG----------SDNHLVLVDLRPMGIDGARVEKILDMA  428 (529)
Q Consensus       369 --~~----~~~~~~-~~i~~~a~~l~~~L~~~-G~~v~~--~g----------t~~~~~~v~~~~~~i~~~~~~~~L~~~  428 (529)
                        ..    .+=++. +...++=+.|.+.+.+. -|.+..  ++          ...-+.|+.+..++  ..+++..|+++
T Consensus       247 ~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~ee--d~DC~~~l~~~  324 (363)
T PF04864_consen  247 YGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREE--DEDCYAVLREA  324 (363)
T ss_dssp             CCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCG--GSSHHHHHHCT
T ss_pred             ccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcc--cccHHHHHHhC
Confidence              00    121222 22333344555665442 243321  10          11235788776432  25688999999


Q ss_pred             CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          429 SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       429 GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      ||..+.+...|.    .+.++|||+.      .+++|++.+.+.|..+
T Consensus       325 ~I~tr~G~~fga----~~ryVRlSml------~~~d~Fd~l~~rL~~l  362 (363)
T PF04864_consen  325 KIITRSGVLFGA----DSRYVRLSML------KRDDDFDQLLERLSKL  362 (363)
T ss_dssp             TEEEEEGGGGTS-----TTEEEEESS------S-HHHHHHHHHHHHCC
T ss_pred             CcccCCCCccCC----CCCeEEEecc------CCHHHHHHHHHHHHhh
Confidence            999876543332    4689999963      4589999999988653

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.

>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]

Probab=97.77  E-value=0.0011  Score=64.18  Aligned_cols=329  Identities=16%  Similarity=0.208  Sum_probs=173.2

Q ss_pred             cceeEecCCCCCcHHHHHHHhhhhhccCCCCCC----CCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673          103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLP----GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS  178 (529)
Q Consensus       103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p----~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs  178 (529)
                      ..+++-+++--+|..|+..++..+.|--.-|..    ..|.   .++...++ .+...+.++++++.. +.+...-.+||
T Consensus         7 ~vvnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRs---k~f~kii~-~tes~lreLlniPdn-~~vlf~QGGGt   81 (370)
T KOG2790|consen    7 RVVNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRS---KDFAKIIN-DTESLLRELLNIPDN-YKVLFLQGGGT   81 (370)
T ss_pred             ceeecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccc---hhHHHHHH-HHHHHHHHHHcCCCc-eeEEEEeCCCc
Confidence            468888888889999999988888654333321    2332   23333333 344778889999864 33333335566


Q ss_pred             HHHHHHHHhhc--CCC---CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCC--CCCCHHHHHHHhhhcC
Q 009673          179 PANFEVYTAIL--KPH---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST--GLVDYDMLEKTAILFR  251 (529)
Q Consensus       179 ~A~~~~l~all--~pG---D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~--~~iD~d~le~~i~~~~  251 (529)
                      ....++...|.  +.|   |-|++-+...      -.  + +...-.|. ...+..+..+.+  ..+|.+.++-..   +
T Consensus        82 ~qFaAv~lNL~glK~g~~AdYiVTGsWS~------KA--~-~EAkk~~~-~~~V~~~~k~y~ygkvPd~~~w~~~~---d  148 (370)
T KOG2790|consen   82 GQFAAVPLNLIGLKHGRCADYVVTGSWSA------KA--A-EEAKKYGT-PNIVIPKLKSYTYGKVPDPSTWELNP---D  148 (370)
T ss_pred             ccccccchhhhccccCCccceEEeccccH------HH--H-HHHHhhCC-ceEEeccccccccCcCCChhhcccCC---C
Confidence            44444444443  555   4555332110      00  0 00001111 122232322222  245555543211   2


Q ss_pred             CcEEEEcCCC--CCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEe
Q 009673          252 PKLIIAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFF  326 (529)
Q Consensus       252 pklIi~~~s~--~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~  326 (529)
                      .+.+..+...  -+..+|  .+- +-.-+|+.+++|.+  +.++     ..|++  .-+++.....|.. ||-| -.++.
T Consensus       149 a~yvyyCaNETVHGVEf~--~~P-~~~~~~~vlVaDmS--Snfl-----SrpvDvsk~gvi~aGAQKN~-G~aG~Tvviv  217 (370)
T KOG2790|consen  149 ASYVYYCANETVHGVEFD--FIP-VNDPKGAVLVADMS--SNFL-----SRPVDVSKFGVIFAGAQKNV-GPAGVTVVIV  217 (370)
T ss_pred             ccEEEEecCceeeceecC--CCC-CCCCCCceEEEecc--cchh-----cCCccchhcceEEecccccc-CccccEEEEE
Confidence            3455544221  111111  110 12346899999985  3333     22333  3458888899986 7777 66777


Q ss_pred             eCCCcchhHHHhhhccc---cc--------CCCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHh-c
Q 009673          327 KKDPVLGVELESAINNA---VF--------PGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVE-L  393 (529)
Q Consensus       327 ~~~~~~~~~l~~~i~~~---~~--------p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~-~  393 (529)
                      ++      ++..+....   ++        ..+..+|....|..+...|+.+...+ ..+..+.-.+.++.+.+.+.+ .
T Consensus       218 r~------dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~  291 (370)
T KOG2790|consen  218 RK------DLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSN  291 (370)
T ss_pred             eh------hhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcC
Confidence            77      443332111   11        11234555556666666777766544 466777777888999999987 4


Q ss_pred             CcEEec--CCCCCce-EEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673          394 GYKLVS--GGSDNHL-VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA  470 (529)
Q Consensus       394 G~~v~~--~gt~~~~-~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la  470 (529)
                      ||-..+  +...+.+ +.+.+.+.+++.+++.+..+++=|.     +-|+.+   -||||-|+-  +  -++-++.+.++
T Consensus       292 gfy~cpVe~~~RS~MNV~Fri~~d~Le~eFLkeA~~~~mv~-----LKGhRS---VGGiRASlY--N--Aisv~~~q~L~  359 (370)
T KOG2790|consen  292 GFYRCPVEPSVRSRMNVPFRIEKDELEAEFLKEAAKEHMVQ-----LKGHRS---VGGIRASLY--N--AISVEEVQKLA  359 (370)
T ss_pred             CeEEcccchhhhhhcccceeecchHHHHHHHHHHHHhhhhc-----cccccc---cccchhhhh--c--cccHHHHHHHH
Confidence            765443  2112222 2233433334444444444443333     234432   478998862  2  25679999999


Q ss_pred             HHHHHHHH
Q 009673          471 DFIHEGVE  478 (529)
Q Consensus       471 ~~i~~~~~  478 (529)
                      +++++..+
T Consensus       360 ~~m~~F~k  367 (370)
T KOG2790|consen  360 AFMKEFQK  367 (370)
T ss_pred             HHHHHHHH
Confidence            99987654

>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]

Probab=97.67  E-value=0.0016  Score=64.94  Aligned_cols=207  Identities=19%  Similarity=0.270  Sum_probs=115.5

Q ss_pred             HHHHHHHhhhcC----C-cEEEEcC--C----CCCCCCCHHHHHHHHHHhCCEEEEeccccccccccccc---CCCCC-c
Q 009673          240 YDMLEKTAILFR----P-KLIIAGA--S----AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV---ADPFK-Y  304 (529)
Q Consensus       240 ~d~le~~i~~~~----p-klIi~~~--s----~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~---~~~~~-~  304 (529)
                      ++++|++|..++    | ..||+..  +    |.....-+..+++|+++||+.+|+|+.|.-|-.-+...   ...++ -
T Consensus       255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P  334 (484)
T KOG1405|consen  255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP  334 (484)
T ss_pred             HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence            567788887653    3 3455531  1    22223347899999999999999999986432211111   11222 3


Q ss_pred             ccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673          305 CDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR  384 (529)
Q Consensus       305 aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~  384 (529)
                      .|+|++|  |-|.  -||| +.++      +++..--...|..+.|-|.-..++.  ..++++.+   +...+++...-+
T Consensus       335 pD~vTFS--KK~q--~gGf-fh~~------~frpn~pYrifNTWmGdP~k~lll~--~vv~~I~~---~~Ll~n~~~vG~  398 (484)
T KOG1405|consen  335 PDVVTFS--KKFQ--TGGF-FHDE------EFRPNEPYRIFNTWMGDPSKNLLLE--EVVQEIKR---EDLLNNVAHVGK  398 (484)
T ss_pred             ccceehh--hhhh--cCcc-ccCc------ccCCCchHHHhhhhcCChHHHHHHH--HHHHHHhH---HHHHHHHHHHHH
Confidence            7888876  6552  2453 2232      3433222223555667766544443  33455443   344555555566


Q ss_pred             HHHHHHHhc-----C-cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCcc
Q 009673          385 ALASRLVEL-----G-YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTT  458 (529)
Q Consensus       385 ~l~~~L~~~-----G-~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt  458 (529)
                      .|...|.++     | +.-+ .|. ..+..||+.... -.+.+...++..||.+..+         +...||+- |.++ 
T Consensus       399 ~l~~gL~~Lq~~~p~~~~~~-RGr-GTF~a~d~ps~~-~Rdk~i~~~~~nGv~~GGC---------g~~siRfR-PsLv-  464 (484)
T KOG1405|consen  399 ALLKGLLELQAKYPGKINNL-RGR-GTFIAWDCPSGS-IRDKLILIARLNGVNLGGC---------GDKSIRFR-PSLV-  464 (484)
T ss_pred             HHHHHHHHHHHhCchhhhcc-ccc-ceEEEEeCCChH-HHHHHHHHHHHcCceeccc---------ccceeeec-ccee-
Confidence            677666542     1 1111 122 235667886432 2356777788899988432         24567774 3344 


Q ss_pred             CCCCHHHHHHHHHHHHHHHH
Q 009673          459 RGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       459 ~g~~~~d~~~la~~i~~~~~  478 (529)
                        +.+...+.+.+.+++++.
T Consensus       465 --f~~~Ha~i~l~~~~k~l~  482 (484)
T KOG1405|consen  465 --FRKHHADIFLDIFDKILA  482 (484)
T ss_pred             --ehhhhHHHHHHHHHHHhc
Confidence              557777777777777653

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=97.29  E-value=0.0082  Score=64.35  Aligned_cols=279  Identities=14%  Similarity=0.108  Sum_probs=143.1

Q ss_pred             HHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC
Q 009673          154 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD  232 (529)
Q Consensus       154 ~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~  232 (529)
                      +..++++.|++-.+-  .+ .--|+.|-.++.++. ..++.+.++..-.|+-.++--      ..+..+...+++     
T Consensus       169 QTmi~dlTGL~~aNA--SL-LDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~------~TRa~~~~i~v~-----  234 (1001)
T KOG2040|consen  169 QTMITDLTGLPMANA--SL-LDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVV------KTRAKGFGIKVV-----  234 (1001)
T ss_pred             HHhhhhccCCcccch--hh-hccchhHHHHHHHHHhhcccceEEecCCCCcchhhhh------hccccccceeEE-----
Confidence            355677788875431  11 234664444433333 456667776665554333211      001111111211     


Q ss_pred             CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC-CCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEe
Q 009673          233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYP-RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTT  310 (529)
Q Consensus       233 ~~~~~iD~d~le~~i~~~~pklIi~~~s~~p-~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~  310 (529)
                          ..|+++..... + +...+++.+|..- .+.|+.++.+.+++.|..+++-    ..+.+.-....|-+ ++||+++
T Consensus       235 ----~~~~~~~~~s~-~-~v~gvlvQYP~t~G~i~d~~el~~~a~~~~s~vv~a----tDLLaLtiLrpPgefGaDIavG  304 (1001)
T KOG2040|consen  235 ----VSDIKEADYSS-K-DVSGVLVQYPDTEGSVLDFDELVELAHANGSLVVMA----TDLLALTILRPPGEFGADIAVG  304 (1001)
T ss_pred             ----ecCHHHhhccc-c-ceeEEEEEcCCCCCcccCHHHHHHHhhccCceEEEe----ehhhHHHccCChhhcCceeeec
Confidence                12333322111 1 3456777777644 4889999999999999887652    22332222334444 8999999


Q ss_pred             ccccc-----ccCCCCeEEEeeCCC-------------c----chhH-----HHhhhcccccCCCCCCChHHHHHHHHHH
Q 009673          311 TTHKS-----LRGPRGGMIFFKKDP-------------V----LGVE-----LESAINNAVFPGLQGGPHNHTIGGLAVC  363 (529)
Q Consensus       311 S~hK~-----l~GprgG~i~~~~~~-------------~----~~~~-----l~~~i~~~~~p~~~g~p~~~~iaala~a  363 (529)
                      |....     ++||..||..+++..             +    ..+.     -.+.|++-.-.....+ ....+|-+++.
T Consensus       305 SsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICT-AQALLANmaAm  383 (1001)
T KOG2040|consen  305 SSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICT-AQALLANMAAM  383 (1001)
T ss_pred             cccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhH-HHHHHHHHHHH
Confidence            99874     467877877766521             0    0000     0111221110000001 00011111111


Q ss_pred             HH-HhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCC
Q 009673          364 LK-HAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKS  442 (529)
Q Consensus       364 l~-~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~  442 (529)
                      +. .....++++..+++....-.|...|++.|.+++..   .++-.+.++-.. +.+++..+-.+..|-...        
T Consensus       384 yaiYHGp~gL~~IArrvh~~T~~l~~~l~~aghel~~k---~fFDTLkI~~~~-s~~~~l~rA~~~~iNlr~--------  451 (1001)
T KOG2040|consen  384 YAIYHGPHGLKEIARRVHNLTLILAEGLKNAGHELQHK---PFFDTLKIRCGC-SAEEVLDRAAKRQINLRL--------  451 (1001)
T ss_pred             HhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcchhhccc---cccceEEEEecC-cHHHHHHHHHhhcCceEE--------
Confidence            11 22345678888999999999999999888777643   333333333222 455554444444555432        


Q ss_pred             CCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673          443 ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH  474 (529)
Q Consensus       443 ~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~  474 (529)
                       +..+-|-+++..-    .+++|++.+...+.
T Consensus       452 -~ed~tigvslDET----v~~~DvddLl~vf~  478 (1001)
T KOG2040|consen  452 -VEDGTIGVSLDET----VTEKDVDDLLWVFN  478 (1001)
T ss_pred             -eecCceEEeeccc----ccHHHHHHHHHHHc
Confidence             1234455555433    45899999988775

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=97.14  E-value=0.0011  Score=60.06  Aligned_cols=56  Identities=13%  Similarity=0.036  Sum_probs=43.7

Q ss_pred             HHHHHHHHHHHHHHHcC--CCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCC
Q 009673          146 IDELETLCQKRALAAFN--LDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHG  203 (529)
Q Consensus       146 ~d~lE~~a~~~la~~~g--~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~  203 (529)
                      ..++.+.+.+++.+.+|  ++.+.  .+|.+++|+ +|+..++.++++|||.|++++|.|+
T Consensus        94 ~~~lR~AiA~~l~~~~g~~v~~~p--d~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~  152 (153)
T PLN02994         94 LANFRKAIANFMAEARGGRVKFDA--DMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA  152 (153)
T ss_pred             cHHHHHHHHHHHHHHhCCCCccch--hheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence            34666677799999988  33211  256678887 9999999999999999999999764

>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]

Probab=95.94  E-value=0.15  Score=49.33  Aligned_cols=112  Identities=21%  Similarity=0.256  Sum_probs=73.9

Q ss_pred             CCCCHHHHHHHhhhcCCcEEEEcCCC----CCC-CCCHHHHHHHHHHhCCEEEEecccccccccccccC-----CCCCcc
Q 009673          236 GLVDYDMLEKTAILFRPKLIIAGASA----YPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA-----DPFKYC  305 (529)
Q Consensus       236 ~~iD~d~le~~i~~~~pklIi~~~s~----~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~-----~~~~~a  305 (529)
                      -.-|++.+++.+++..+..|++-.+.    -|+ ...+++|+.||..|+++-++..|+  |+-......     ......
T Consensus       139 l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnay--glqsee~i~~iaa~~~~gri  216 (432)
T KOG3843|consen  139 LITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAY--GLQSEECIHKIAAAAECGRI  216 (432)
T ss_pred             HHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhcccc--ccchHHHHHHHHHHhhhccH
Confidence            35589999999988778866654332    233 567999999999999999999874  322111000     011247


Q ss_pred             cEEEecccccccCCCCeEEEe-eCCCcchhHHHhhhcccccCCC-CCCChHH
Q 009673          306 DVVTTTTHKSLRGPRGGMIFF-KKDPVLGVELESAINNAVFPGL-QGGPHNH  355 (529)
Q Consensus       306 Div~~S~hK~l~GprgG~i~~-~~~~~~~~~l~~~i~~~~~p~~-~g~p~~~  355 (529)
                      |.++-|+.|.|.-|-||.|+. -++     .+++.|.+. +||- ...|...
T Consensus       217 da~vqsldknf~vpvggaiia~fk~-----n~iq~iak~-ypgrasa~ps~d  262 (432)
T KOG3843|consen  217 DAFVQSLDKNFMVPVGGAIIAAFKD-----NFIQEIAKM-YPGRASASPSLD  262 (432)
T ss_pred             HHHHHHhhhcceeecchhHhhHhHH-----HHHHHHHHh-CCCccccCccHH
Confidence            889999999999999976654 222     566666554 5654 3344443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	529
3ou5_A	490	Human Mitochondrial Serine Hydroxymethyltransferase		1e-163
1bj4_A	470	Recombinant Serine Hydroxymethyltransferase (human)		1e-158
1cj0_A	470	Crystal Structure Of Rabbit Cytosolic Serine Hydrox		1e-156
1ls3_B	483	Crystal Structure Of The Complex Between Rabbit Cyt		1e-156
1rvu_A	483	E75q Mutant Of Rabbit Cytosolic Serine Hydroxymethy		1e-156
1rv3_A	483	E75l Mutant Of Rabbit Cytosolic Serine Hydroxymethy		1e-156
1eji_A	478	Recombinant Serine Hydroxymethyltransferase (Mouse)		1e-151
1kkj_A	419	Crystal Structure Of Serine Hydroxymethyltransferas		1e-105
1yjs_A	419	K226q Mutant Of Serine Hydroxymethyltransferase Fro		1e-104
2vgs_A	407	Crystal Structure Of E53qbsshmt Internal Aldimine L		1e-104
2vi8_A	405	Crystal Structure Of S172absshmt Internal Aldimine		1e-104
2w7d_A	405	Crystal Structure Of Y51fbsshmt Internal Aldimine L		1e-104
2vmv_A	405	Crystal Structure Of F351gbsshmt Internal Aldimine		1e-104
1yjy_A	419	K226m Mutant Of Serine Hydroxymethyltransferase Fro		1e-104
2vmn_A	405	Crystal Structure Of N341absshmt Internal Aldimine		1e-104
2w7i_A	405	Crystal Structure Of Y61absshmt Internal Aldimine L		1e-104
2vmr_A	405	Crystal Structure Of Y60absshmt Internal Aldimine L		1e-104
2dkj_A	407	Crystal Structure Of T.Th.Hb8 Serine Hydroxymethylt		1e-103
3ecd_A	425	Crystal Structure Of Serine Hydroxymethyltransferas		1e-102
3pgy_A	415	Serine Hydroxymethyltransferase From Staphylococcus		1e-101
3h7f_A	447	Crystal Structure Of Serine Hydroxymethyltransferas		2e-99
1dfo_A	417	Crystal Structure At 2.4 Angstrom Resolution Of E.		2e-97
1eqb_A	417	X-Ray Crystal Structure At 2.7 Angstroms Resolution		6e-97
3g8m_A	417	Serine Hydroxymethyltransferase Y55f Mutant Length		6e-97
3n0l_A	417	Crystal Structure Of Serine Hydroxymethyltransferas		4e-94
3gbx_A	420	Serine Hydroxymethyltransferase From Salmonella Typ		8e-92

>pdb|3OU5|A Chain A, Human Mitochondrial Serine Hydroxymethyltransferase 2 Length = 490

Iteration: 1
 Score =  573 bits (1476), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 274/456 (60%), Positives = 344/456 (75%), Gaps = 12/456 (2%)
Query: 82  SLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG 141
           SL ++DPE+ E++ +EK+RQ + LELIASENF SRA +EA+GSCL NKYSEG PGKRYYG
Sbjct: 34  SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 93
Query: 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP 201
           G E +DE+E LCQ+RAL AF+LD  +WGVNVQP SGSPAN  VYTA+L+PHDRIMGLDLP
Sbjct: 94  GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLP 153
Query: 202 HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261
            GGHL+HG+M+  +R+S TSI+FESMPY+L+  TGL+DY+ L  TA LFRP+LIIAG SA
Sbjct: 154 DGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSA 213
Query: 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG 321
           Y R  DY RMR++ D V A L+ DMAHISGLVAA V+  PFK+ D+VTTTTHK+LRG R 
Sbjct: 214 YARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARS 273
Query: 322 GMIFFKK-----DPVLGVEL----ESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372
           G+IF++K     DP  G E+    E  IN AVFP LQGGPHNH I  +AV LK A +P F
Sbjct: 274 GLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMF 333
Query: 373 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITL 432
           + Y  +V+ N RA+A  L+E GY LVSGG+DNHLVLVDLRP G+DGAR E++L++ SIT 
Sbjct: 334 REYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITA 393
Query: 433 NKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKL 492
           NKN+ PGD+SA+ PGG+R+G+PA+T+R F E +F  + DFI EGV I LE K   + +KL
Sbjct: 394 NKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKS--KTAKL 451
Query: 493 QDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 528
           QDF +F+   +      +A+LR RVE     FP+PG
Sbjct: 452 QDFKSFLLK-DSETSQRLANLRQRVEQFARAFPMPG 486

>pdb|1BJ4|A Chain A, Recombinant Serine Hydroxymethyltransferase (human) Length = 470

Iteration: 1
 Score =  555 bits (1431), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 279/457 (61%), Positives = 343/457 (75%), Gaps = 12/457 (2%)
Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           L ++D EV  II KE  RQ   LELIASENF SRAV+EA+GSCL NKYSEG PG+RYYGG
Sbjct: 16  LKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGG 75
Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
            E+IDELETLCQKRAL A+ LD   WGVNVQP SGSPANF VYTA+++PH RIMGLDLP 
Sbjct: 76  TEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPD 135
Query: 203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
           GGHL+HGFMT K+++S TSI+FESMPY+++  TG ++YD LE+ A LF PKLIIAG S Y
Sbjct: 136 GGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLIIAGTSCY 195
Query: 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
            R+ +Y R+R+IAD  GA LM DMAHISGLVAA VV  PF++C VVTTTTHK+LRG R G
Sbjct: 196 SRNLEYARLRKIADENGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTLRGCRAG 255
Query: 323 MIFFKK-----DPVLGVE----LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373
           MIF++K     DP  G E    LES IN+AVFPGLQGGPHNH I G+AV LK A + EFK
Sbjct: 256 MIFYRKGVKSVDPATGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTLEFK 315
Query: 374 VYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN 433
           VYQ++VV+NCRAL+  L ELGYK+V+GGSDNHL+LVDLR  G DG R EK+L+  SI  N
Sbjct: 316 VYQHQVVANCRALSEALTELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACN 375
Query: 434 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQ-GSKL 492
           KN+ PGD+SAL P G+R+G+PA+T+RG  EK+F  +A FIH G+E+TL+ +      + L
Sbjct: 376 KNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDTGVAATL 435
Query: 493 QDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
           ++F   +    +     V  LR  VE+  + FP+PG+
Sbjct: 436 KEFKERLAGDKYQAA--VQALREEVESFASLFPLPGL 470

>pdb|1CJ0|A Chain A, Crystal Structure Of Rabbit Cytosolic Serine Hydroxymethyltransferase At 2.8 Angstrom Resolution Length = 470

Iteration: 1
 Score =  550 bits (1416), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 279/457 (61%), Positives = 342/457 (74%), Gaps = 11/457 (2%)
Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           L ++D EV +II KE  RQ   LELIASENF SRAV+EA+GSCL NKYSEG PG+RYYGG
Sbjct: 12  LKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGG 71
Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
            E+IDELETLCQKRAL A+ LD   WGVNVQP SGSPANF VYTA+++PH RIMGLDLP 
Sbjct: 72  TEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPD 131
Query: 203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
           GGHL+HGFMT K+++S TSI+FESM Y+++  TG +DYD LE+ A LF PKLIIAG S Y
Sbjct: 132 GGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIAGTSCY 191
Query: 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
            R+ DY R+R+IAD  GA LM DMAHISGLV A VV  PF++C VVTTTTHK+LRG R G
Sbjct: 192 SRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRGCRAG 251
Query: 323 MIFFKK-----DPVLGVE----LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373
           MIF+++     DP  G E    LES IN+AVFPGLQGGPHNH I G+AV LK A +PEFK
Sbjct: 252 MIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFK 311
Query: 374 VYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN 433
            YQ +VV+NCRAL++ LVELGYK+V+GGSDNHL+LVDLR  G DG R EK+L+  SI  N
Sbjct: 312 EYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACN 371
Query: 434 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLV-QGSKL 492
           KN+ PGDKSAL P G+R+G+PA+T+RG  EK+F  +A FIH G+E+T++ +      + L
Sbjct: 372 KNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQDDTGPRATL 431
Query: 493 QDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
           ++F   +   +      V  LR  VE+    FP+PG+
Sbjct: 432 KEFKEKLAG-DEKHQRAVRALRQEVESFAALFPLPGL 467

>pdb|1LS3|B Chain B, Crystal Structure Of The Complex Between Rabbit Cytosolic Serine Hydroxymethyltransferase And Triglu-5-Formyl-Tetrahydrofolate Length = 483

Iteration: 1
 Score =  549 bits (1415), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 279/457 (61%), Positives = 342/457 (74%), Gaps = 11/457 (2%)
Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           L ++D EV +II KE  RQ   LELIASENF SRAV+EA+GSCL NKYSEG PG+RYYGG
Sbjct: 25  LKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGG 84
Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
            E+IDELETLCQKRAL A+ LD   WGVNVQP SGSPANF VYTA+++PH RIMGLDLP 
Sbjct: 85  TEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPD 144
Query: 203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
           GGHL+HGFMT K+++S TSI+FESM Y+++  TG +DYD LE+ A LF PKLIIAG S Y
Sbjct: 145 GGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIAGTSCY 204
Query: 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
            R+ DY R+R+IAD  GA LM DMAHISGLV A VV  PF++C VVTTTTHK+LRG R G
Sbjct: 205 SRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRGCRAG 264
Query: 323 MIFFKK-----DPVLGVE----LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373
           MIF+++     DP  G E    LES IN+AVFPGLQGGPHNH I G+AV LK A +PEFK
Sbjct: 265 MIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFK 324
Query: 374 VYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN 433
            YQ +VV+NCRAL++ LVELGYK+V+GGSDNHL+LVDLR  G DG R EK+L+  SI  N
Sbjct: 325 EYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACN 384
Query: 434 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLV-QGSKL 492
           KN+ PGDKSAL P G+R+G+PA+T+RG  EK+F  +A FIH G+E+T++ +      + L
Sbjct: 385 KNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQDDTGPRATL 444
Query: 493 QDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
           ++F   +   +      V  LR  VE+    FP+PG+
Sbjct: 445 KEFKEKLAG-DEKHQRAVRALRQEVESFAALFPLPGL 480

>pdb|1RVU|A Chain A, E75q Mutant Of Rabbit Cytosolic Serine Hydroxymethyltransferase Length = 483

Iteration: 1
 Score =  548 bits (1413), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 278/457 (60%), Positives = 342/457 (74%), Gaps = 11/457 (2%)
Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           L ++D EV +II KE  RQ   LELIASENF SRAV+EA+GSCL NKYS+G PG+RYYGG
Sbjct: 25  LKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSQGYPGQRYYGG 84
Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
            E+IDELETLCQKRAL A+ LD   WGVNVQP SGSPANF VYTA+++PH RIMGLDLP 
Sbjct: 85  TEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPD 144
Query: 203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
           GGHL+HGFMT K+++S TSI+FESM Y+++  TG +DYD LE+ A LF PKLIIAG S Y
Sbjct: 145 GGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIAGTSCY 204
Query: 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
            R+ DY R+R+IAD  GA LM DMAHISGLV A VV  PF++C VVTTTTHK+LRG R G
Sbjct: 205 SRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRGCRAG 264
Query: 323 MIFFKK-----DPVLGVE----LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373
           MIF+++     DP  G E    LES IN+AVFPGLQGGPHNH I G+AV LK A +PEFK
Sbjct: 265 MIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFK 324
Query: 374 VYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN 433
            YQ +VV+NCRAL++ LVELGYK+V+GGSDNHL+LVDLR  G DG R EK+L+  SI  N
Sbjct: 325 EYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACN 384
Query: 434 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLV-QGSKL 492
           KN+ PGDKSAL P G+R+G+PA+T+RG  EK+F  +A FIH G+E+T++ +      + L
Sbjct: 385 KNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQDDTGPRATL 444
Query: 493 QDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
           ++F   +   +      V  LR  VE+    FP+PG+
Sbjct: 445 KEFKEKLAG-DEKHQRAVRALRQEVESFAALFPLPGL 480

>pdb|1RV3|A Chain A, E75l Mutant Of Rabbit Cytosolic Serine Hydroxymethyltransferase, Complex With Glycine Length = 483

Iteration: 1
 Score =  546 bits (1408), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 278/457 (60%), Positives = 341/457 (74%), Gaps = 11/457 (2%)
Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           L ++D EV +II KE  RQ   LELIASENF SRAV+EA+GSCL NKYS G PG+RYYGG
Sbjct: 25  LKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLGYPGQRYYGG 84
Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
            E+IDELETLCQKRAL A+ LD   WGVNVQP SGSPANF VYTA+++PH RIMGLDLP 
Sbjct: 85  TEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPD 144
Query: 203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
           GGHL+HGFMT K+++S TSI+FESM Y+++  TG +DYD LE+ A LF PKLIIAG S Y
Sbjct: 145 GGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIAGTSCY 204
Query: 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
            R+ DY R+R+IAD  GA LM DMAHISGLV A VV  PF++C VVTTTTHK+LRG R G
Sbjct: 205 SRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRGCRAG 264
Query: 323 MIFFKK-----DPVLGVE----LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373
           MIF+++     DP  G E    LES IN+AVFPGLQGGPHNH I G+AV LK A +PEFK
Sbjct: 265 MIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFK 324
Query: 374 VYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN 433
            YQ +VV+NCRAL++ LVELGYK+V+GGSDNHL+LVDLR  G DG R EK+L+  SI  N
Sbjct: 325 EYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACN 384
Query: 434 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLV-QGSKL 492
           KN+ PGDKSAL P G+R+G+PA+T+RG  EK+F  +A FIH G+E+T++ +      + L
Sbjct: 385 KNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQDDTGPRATL 444
Query: 493 QDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
           ++F   +   +      V  LR  VE+    FP+PG+
Sbjct: 445 KEFKEKLAG-DEKHQRAVRALRQEVESFAALFPLPGL 480

>pdb|1EJI|A Chain A, Recombinant Serine Hydroxymethyltransferase (Mouse) Length = 478

Iteration: 1
 Score =  530 bits (1366), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 269/457 (58%), Positives = 333/457 (72%), Gaps = 11/457 (2%)
Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           L ++D EV  II KE  RQ   LELIASENF SRAV+EA+GS L NKYSEG PG+RYYGG
Sbjct: 20  LKDSDAEVYSIIKKESNRQRVGLELIASENFASRAVLEALGSSLNNKYSEGYPGQRYYGG 79
Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
            E+IDELE LCQKRAL A++LD   WGVNVQP SGSPANF VYTA+++PH RI GLDLP 
Sbjct: 80  TEFIDELEXLCQKRALQAYHLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIXGLDLPD 139
Query: 203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
           GGHL+HGF T K+++S TSI+FES PY++   TG ++YD LE+ A LF PKLIIAG S Y
Sbjct: 140 GGHLTHGFXTDKKKISATSIFFESXPYKVYPETGYINYDQLEENASLFHPKLIIAGTSCY 199
Query: 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
            R+ DY R+R+IAD  GA L  D AHISGLVAA VV  PF++C VVTTTTHK+LRG R G
Sbjct: 200 SRNLDYARLRKIADDNGAYLXADXAHISGLVAAGVVPSPFEHCHVVTTTTHKTLRGCRAG 259
Query: 323 MIFFKK-----DPVLG----VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373
            IF++K     DP  G     ELES IN+AVFPGLQGGPHNH I G+AV LK A + EFK
Sbjct: 260 XIFYRKGVRSVDPKTGKETYYELESLINSAVFPGLQGGPHNHAIAGVAVALKQAXTTEFK 319
Query: 374 VYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN 433
           +YQ +V++NCRAL+  L ELGYK+V+GGSDNHL+L DLR  G DG R EK+L+  SI  N
Sbjct: 320 IYQLQVLANCRALSDALTELGYKIVTGGSDNHLILXDLRSKGTDGGRAEKVLEACSIACN 379
Query: 434 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKK-LVQGSKL 492
           KN+ PGDKSAL P G+R+G+PA+T+RG  E++F  +A FIH G+E+TL+ +      + L
Sbjct: 380 KNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKVAHFIHRGIELTLQIQSHXATKATL 439
Query: 493 QDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
           ++F   +      + + VA LR  VE   + F +PG+
Sbjct: 440 KEFKEKLAGDE-KIQSAVATLREEVENFASNFSLPGL 475

>pdb|1KKJ|A Chain A, Crystal Structure Of Serine Hydroxymethyltransferase From B.Stearothermophilus Length = 419

Iteration: 1
 Score =  378 bits (970), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/392 (50%), Positives = 259/392 (66%), Gaps = 16/392 (4%)
Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           L + DP+V   I +E++RQ   +ELIASENF SRAVMEA GS LTNKY+EG PG+RYYGG
Sbjct: 4   LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGG 63
Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
            EY+D +E L ++RA   F  +      NVQP SG+ AN  VY  +L+  D ++G++L H
Sbjct: 64  CEYVDIVEELARERAKQLFGAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
           GGHL+HG  +P   V+ + + +  + Y +D  T ++DYD + + A L RPKLI+A ASAY
Sbjct: 120 GGHLTHG--SP---VNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAY 174
Query: 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
           PR  D+ + R+IAD VGA LM+DMAHI+GLVAA +  +P  Y   VTTTTHK+LRGPRGG
Sbjct: 175 PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGG 234
Query: 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382
           MI  ++      +    I+ A+FPG+QGGP  H I   AV    A   +FK Y  +VV N
Sbjct: 235 MILCQE------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDN 288
Query: 383 CRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-K 441
            + LAS L   G+ LVSGG+DNHL+LVDLRP  + G   EK+LD   IT+NKN++P D +
Sbjct: 289 AKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPE 348
Query: 442 SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473
           S  V  GIRIG+ A+TTRGF  +E   IA  I
Sbjct: 349 SPFVTSGIRIGTAAVTTRGFGLEEMDEIAAII 380

>pdb|1YJS|A Chain A, K226q Mutant Of Serine Hydroxymethyltransferase From B. Stearothermophilus, Complex With Glycine Length = 419

Iteration: 1
 Score =  376 bits (966), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/392 (50%), Positives = 259/392 (66%), Gaps = 16/392 (4%)
Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           L + DP+V   I +E++RQ   +ELIASENF SRAVMEA GS LTNKY+EG PG+RYYGG
Sbjct: 4   LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGG 63
Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
            EY+D +E L ++RA   F  +      NVQP SG+ AN  VY  +L+  D ++G++L H
Sbjct: 64  CEYVDIVEELARERAKQLFGAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
           GGHL+HG  +P   V+ + + +  + Y +D  T ++DYD + + A L RPKLI+A ASAY
Sbjct: 120 GGHLTHG--SP---VNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAY 174
Query: 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
           PR  D+ + R+IAD VGA LM+DMAHI+GLVAA +  +P  Y   VTTTTH++LRGPRGG
Sbjct: 175 PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHQTLRGPRGG 234
Query: 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382
           MI  ++      +    I+ A+FPG+QGGP  H I   AV    A   +FK Y  +VV N
Sbjct: 235 MILCQE------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDN 288
Query: 383 CRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-K 441
            + LAS L   G+ LVSGG+DNHL+LVDLRP  + G   EK+LD   IT+NKN++P D +
Sbjct: 289 AKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPE 348
Query: 442 SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473
           S  V  GIRIG+ A+TTRGF  +E   IA  I
Sbjct: 349 SPFVTSGIRIGTAAVTTRGFGLEEMDEIAAII 380

>pdb|2VGS|A Chain A, Crystal Structure Of E53qbsshmt Internal Aldimine Length = 407

Iteration: 1
 Score =  376 bits (966), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/392 (50%), Positives = 259/392 (66%), Gaps = 16/392 (4%)
Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           L + DP+V   I +E++RQ   +ELIASENF SRAVMEA GS LTNKY++G PG+RYYGG
Sbjct: 4   LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAQGYPGRRYYGG 63
Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
            EY+D +E L ++RA   F  +      NVQP SG+ AN  VY  +L+  D ++G++L H
Sbjct: 64  CEYVDIVEELARERAKQLFGAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
           GGHL+HG  +P   V+ + + +  + Y +D  T ++DYD + + A L RPKLI+A ASAY
Sbjct: 120 GGHLTHG--SP---VNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAY 174
Query: 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
           PR  D+ + R+IAD VGA LM+DMAHI+GLVAA +  +P  Y   VTTTTHK+LRGPRGG
Sbjct: 175 PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGG 234
Query: 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382
           MI  ++      +    I+ A+FPG+QGGP  H I   AV    A   +FK Y  +VV N
Sbjct: 235 MILCQE------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDN 288
Query: 383 CRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-K 441
            + LAS L   G+ LVSGG+DNHL+LVDLRP  + G   EK+LD   IT+NKN++P D +
Sbjct: 289 AKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPE 348
Query: 442 SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473
           S  V  GIRIG+ A+TTRGF  +E   IA  I
Sbjct: 349 SPFVTSGIRIGTAAVTTRGFGLEEMDEIAAII 380

>pdb|2VI8|A Chain A, Crystal Structure Of S172absshmt Internal Aldimine Length = 405

Iteration: 1
 Score =  376 bits (966), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/392 (50%), Positives = 259/392 (66%), Gaps = 16/392 (4%)
Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           L + DP+V   I +E++RQ   +ELIASENF SRAVMEA GS LTNKY+EG PG+RYYGG
Sbjct: 4   LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGG 63
Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
            EY+D +E L ++RA   F  +      NVQP SG+ AN  VY  +L+  D ++G++L H
Sbjct: 64  CEYVDIVEELARERAKQLFGAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
           GGHL+HG  +P   V+ + + +  + Y +D  T ++DYD + + A L RPKLI+A A+AY
Sbjct: 120 GGHLTHG--SP---VNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAAAAY 174
Query: 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
           PR  D+ + R+IAD VGA LM+DMAHI+GLVAA +  +P  Y   VTTTTHK+LRGPRGG
Sbjct: 175 PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGG 234
Query: 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382
           MI  ++      +    I+ A+FPG+QGGP  H I   AV    A   +FK Y  +VV N
Sbjct: 235 MILCQE------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDN 288
Query: 383 CRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-K 441
            + LAS L   G+ LVSGG+DNHL+LVDLRP  + G   EK+LD   IT+NKN++P D +
Sbjct: 289 AKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPE 348
Query: 442 SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473
           S  V  GIRIG+ A+TTRGF  +E   IA  I
Sbjct: 349 SPFVTSGIRIGTAAVTTRGFGLEEMDEIAAII 380

>pdb|2W7D|A Chain A, Crystal Structure Of Y51fbsshmt Internal Aldimine Length = 405

Iteration: 1
 Score =  376 bits (965), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/392 (50%), Positives = 259/392 (66%), Gaps = 16/392 (4%)
Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           L + DP+V   I +E++RQ   +ELIASENF SRAVMEA GS LTNK++EG PG+RYYGG
Sbjct: 4   LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKFAEGYPGRRYYGG 63
Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
            EY+D +E L ++RA   F  +      NVQP SG+ AN  VY  +L+  D ++G++L H
Sbjct: 64  CEYVDIVEELARERAKQLFGAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
           GGHL+HG  +P   V+ + + +  + Y +D  T ++DYD + + A L RPKLI+A ASAY
Sbjct: 120 GGHLTHG--SP---VNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAY 174
Query: 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
           PR  D+ + R+IAD VGA LM+DMAHI+GLVAA +  +P  Y   VTTTTHK+LRGPRGG
Sbjct: 175 PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGG 234
Query: 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382
           MI  ++      +    I+ A+FPG+QGGP  H I   AV    A   +FK Y  +VV N
Sbjct: 235 MILCQE------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDN 288
Query: 383 CRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-K 441
            + LAS L   G+ LVSGG+DNHL+LVDLRP  + G   EK+LD   IT+NKN++P D +
Sbjct: 289 AKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPE 348
Query: 442 SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473
           S  V  GIRIG+ A+TTRGF  +E   IA  I
Sbjct: 349 SPFVTSGIRIGTAAVTTRGFGLEEMDEIAAII 380

>pdb|2VMV|A Chain A, Crystal Structure Of F351gbsshmt Internal Aldimine Length = 405

Iteration: 1
 Score =  375 bits (964), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/392 (50%), Positives = 259/392 (66%), Gaps = 16/392 (4%)
Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           L + DP+V   I +E++RQ   +ELIASENF SRAVMEA GS LTNKY+EG PG+RYYGG
Sbjct: 4   LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGG 63
Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
            EY+D +E L ++RA   F  +      NVQP SG+ AN  VY  +L+  D ++G++L H
Sbjct: 64  CEYVDIVEELARERAKQLFGAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
           GGHL+HG  +P   V+ + + +  + Y +D  T ++DYD + + A L RPKLI+A ASAY
Sbjct: 120 GGHLTHG--SP---VNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAY 174
Query: 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
           PR  D+ + R+IAD VGA LM+DMAHI+GLVAA +  +P  Y   VTTTTHK+LRGPRGG
Sbjct: 175 PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGG 234
Query: 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382
           MI  ++      +    I+ A+FPG+QGGP  H I   AV    A   +FK Y  +VV N
Sbjct: 235 MILCQE------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDN 288
Query: 383 CRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-K 441
            + LAS L   G+ LVSGG+DNHL+LVDLRP  + G   EK+LD   IT+NKN++P D +
Sbjct: 289 AKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPE 348
Query: 442 SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473
           S  V  GIRIG+ A+TTRGF  +E   IA  I
Sbjct: 349 SPGVTSGIRIGTAAVTTRGFGLEEMDEIAAII 380

>pdb|1YJY|A Chain A, K226m Mutant Of Serine Hydroxymethyltransferase From B. Stearothermophilus, Complex With Serine Length = 419

Iteration: 1
 Score =  375 bits (963), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/392 (50%), Positives = 258/392 (65%), Gaps = 16/392 (4%)
Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           L + DP+V   I +E++RQ   +ELIASENF SRAVMEA GS LTNKY+EG PG+RYYGG
Sbjct: 4   LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGG 63
Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
            EY+D +E L ++RA   F  +      NVQP SG+ AN  VY  +L+  D ++G++L H
Sbjct: 64  CEYVDIVEELARERAKQLFGAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
           GGHL+HG  +P   V+ + + +  + Y +D  T ++DYD + + A L RPKLI+A ASAY
Sbjct: 120 GGHLTHG--SP---VNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAY 174
Query: 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
           PR  D+ + R+IAD VGA LM+DMAHI+GLVAA +  +P  Y   VTTTTH +LRGPRGG
Sbjct: 175 PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHMTLRGPRGG 234
Query: 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382
           MI  ++      +    I+ A+FPG+QGGP  H I   AV    A   +FK Y  +VV N
Sbjct: 235 MILCQE------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDN 288
Query: 383 CRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-K 441
            + LAS L   G+ LVSGG+DNHL+LVDLRP  + G   EK+LD   IT+NKN++P D +
Sbjct: 289 AKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPE 348
Query: 442 SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473
           S  V  GIRIG+ A+TTRGF  +E   IA  I
Sbjct: 349 SPFVTSGIRIGTAAVTTRGFGLEEMDEIAAII 380

>pdb|2VMN|A Chain A, Crystal Structure Of N341absshmt Internal Aldimine Length = 405

Iteration: 1
 Score =  374 bits (961), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/392 (50%), Positives = 258/392 (65%), Gaps = 16/392 (4%)
Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           L + DP+V   I +E++RQ   +ELIASENF SRAVMEA GS LTNKY+EG PG+RYYGG
Sbjct: 4   LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGG 63
Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
            EY+D +E L ++RA   F  +      NVQP SG+ AN  VY  +L+  D ++G++L H
Sbjct: 64  CEYVDIVEELARERAKQLFGAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
           GGHL+HG  +P   V+ + + +  + Y +D  T ++DYD + + A L RPKLI+A ASAY
Sbjct: 120 GGHLTHG--SP---VNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAY 174
Query: 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
           PR  D+ + R+IAD VGA LM+DMAHI+GLVAA +  +P  Y   VTTTTHK+LRGPRGG
Sbjct: 175 PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGG 234
Query: 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382
           MI  ++      +    I+ A+FPG+QGGP  H I   AV    A   +FK Y  +VV N
Sbjct: 235 MILCQE------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDN 288
Query: 383 CRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-K 441
            + LAS L   G+ LVSGG+DNHL+LVDLRP  + G   EK+LD   IT+NK ++P D +
Sbjct: 289 AKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKATIPYDPE 348
Query: 442 SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473
           S  V  GIRIG+ A+TTRGF  +E   IA  I
Sbjct: 349 SPFVTSGIRIGTAAVTTRGFGLEEMDEIAAII 380

>pdb|2W7I|A Chain A, Crystal Structure Of Y61absshmt Internal Aldimine Length = 405

Iteration: 1
 Score =  374 bits (960), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/392 (50%), Positives = 258/392 (65%), Gaps = 16/392 (4%)
Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           L + DP+V   I +E++RQ   +ELIASENF SRAVMEA GS LTNKY+EG PG+RY GG
Sbjct: 4   LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYAGG 63
Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
            EY+D +E L ++RA   F  +      NVQP SG+ AN  VY  +L+  D ++G++L H
Sbjct: 64  CEYVDIVEELARERAKQLFGAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
           GGHL+HG  +P   V+ + + +  + Y +D  T ++DYD + + A L RPKLI+A ASAY
Sbjct: 120 GGHLTHG--SP---VNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAY 174
Query: 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
           PR  D+ + R+IAD VGA LM+DMAHI+GLVAA +  +P  Y   VTTTTHK+LRGPRGG
Sbjct: 175 PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGG 234
Query: 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382
           MI  ++      +    I+ A+FPG+QGGP  H I   AV    A   +FK Y  +VV N
Sbjct: 235 MILCQE------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDN 288
Query: 383 CRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-K 441
            + LAS L   G+ LVSGG+DNHL+LVDLRP  + G   EK+LD   IT+NKN++P D +
Sbjct: 289 AKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPE 348
Query: 442 SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473
           S  V  GIRIG+ A+TTRGF  +E   IA  I
Sbjct: 349 SPFVTSGIRIGTAAVTTRGFGLEEMDEIAAII 380

>pdb|2VMR|A Chain A, Crystal Structure Of Y60absshmt Internal Aldimine Length = 405

Iteration: 1
 Score =  374 bits (960), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/392 (50%), Positives = 258/392 (65%), Gaps = 16/392 (4%)
Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           L + DP+V   I +E++RQ   +ELIASENF SRAVMEA GS LTNKY+EG PG+R YGG
Sbjct: 4   LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRAYGG 63
Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
            EY+D +E L ++RA   F  +      NVQP SG+ AN  VY  +L+  D ++G++L H
Sbjct: 64  CEYVDIVEELARERAKQLFGAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
           GGHL+HG  +P   V+ + + +  + Y +D  T ++DYD + + A L RPKLI+A ASAY
Sbjct: 120 GGHLTHG--SP---VNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAY 174
Query: 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
           PR  D+ + R+IAD VGA LM+DMAHI+GLVAA +  +P  Y   VTTTTHK+LRGPRGG
Sbjct: 175 PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGG 234
Query: 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382
           MI  ++      +    I+ A+FPG+QGGP  H I   AV    A   +FK Y  +VV N
Sbjct: 235 MILCQE------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDN 288
Query: 383 CRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-K 441
            + LAS L   G+ LVSGG+DNHL+LVDLRP  + G   EK+LD   IT+NKN++P D +
Sbjct: 289 AKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPE 348
Query: 442 SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473
           S  V  GIRIG+ A+TTRGF  +E   IA  I
Sbjct: 349 SPFVTSGIRIGTAAVTTRGFGLEEMDEIAAII 380

>pdb|2DKJ|A Chain A, Crystal Structure Of T.Th.Hb8 Serine Hydroxymethyltransferase Length = 407

Iteration: 1
 Score =  371 bits (953), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 197/388 (50%), Positives = 256/388 (65%), Gaps = 15/388 (3%)
Query: 87  DPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYI 146
           D  + E+I  E++RQ + LELIASENF S+ V EAVGS LTNKY+EG PG RYYGG E I
Sbjct: 8   DEALFELIALEEKRQREGLELIASENFVSKQVREAVGSVLTNKYAEGYPGARYYGGCEVI 67
Query: 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHL 206
           D +E+L  +RA A F      W  NVQP SGS AN  VY A+++P D +MG+DL  GGHL
Sbjct: 68  DRVESLAIERAKALFG---AAWA-NVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHL 123
Query: 207 SHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDF 266
           +HG      RV+ +   ++ + Y +   T L+D + + + A+  RPK+I+AGASAYPR +
Sbjct: 124 THG-----SRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYPRFW 178
Query: 267 DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFF 326
           D+   R+IAD VGA L++DMAH +GLVAA +  +P  Y  VVT+TTHK+LRGPRGG+I  
Sbjct: 179 DFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRGGLI-L 237
Query: 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 386
             DP LG      I+  +FPG+QGGP  H I G AV    A  PEFK Y   VV N + L
Sbjct: 238 SNDPELG----KRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRL 293
Query: 387 ASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-KSALV 445
           A  L   GY++V+GG+DNHL LVDLRP G+ G   E+ LD   IT+NKN++P D K   V
Sbjct: 294 AEELARRGYRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRV 353
Query: 446 PGGIRIGSPAMTTRGFSEKEFVAIADFI 473
             GIRIG+PA+TTRGF+ +E   +A+ I
Sbjct: 354 TSGIRIGTPAITTRGFTPEEMPLVAELI 381

>pdb|3ECD|A Chain A, Crystal Structure Of Serine Hydroxymethyltransferase From Burkholderia Pseudomallei Length = 425

Iteration: 1
 Score =  368 bits (944), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 200/406 (49%), Positives = 258/406 (63%), Gaps = 15/406 (3%)
Query: 74  DGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEG 133
           + + F   SL E D  V   I KE ERQ   +ELIASEN  SRAV++A GS LTNKY+EG
Sbjct: 4   NANPFFSQSLAERDASVRGAILKELERQQSQVELIASENIVSRAVLDAQGSVLTNKYAEG 63
Query: 134 LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD 193
            PGKRYYGG E+ DE+E L  +R    FN        NVQP SG+ AN  V  A+ KP D
Sbjct: 64  YPGKRYYGGCEFADEVEALAIERVKRLFNAGH----ANVQPHSGAQANGAVMLALAKPGD 119
Query: 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK 253
            ++G+ L  GGHL+HG    K  +SG   +F ++ Y +   T L+DYD +E  A   +P 
Sbjct: 120 TVLGMSLDAGGHLTHG---AKPALSGK--WFNALQYGVSRDTMLIDYDQVEALAQQHKPS 174
Query: 254 LIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH 313
           LIIAG SAYPR  D+ R R IAD+VGA LM+DMAHI+G++AA   A+P ++  VVT+TTH
Sbjct: 175 LIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTH 234
Query: 314 KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373
           K+LRGPRGG +    +     E+   IN+AVFPGLQGGP  H I G AV    A + +FK
Sbjct: 235 KTLRGPRGGFVLTNDE-----EIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFK 289
Query: 374 VYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN 433
            Y ++V++N +AL   L   G  LV+GG+DNHL+LVDLRP G+ GA+VE+ L+ A IT N
Sbjct: 290 TYIDRVLANAQALGDVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCN 349
Query: 434 KNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478
           KN +P D +   +  GIR+G+PA TTRGF   EF  +   I E  E
Sbjct: 350 KNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFE 395

>pdb|3PGY|A Chain A, Serine Hydroxymethyltransferase From Staphylococcus Aureus, S95p Mutant. Length = 415

Iteration: 1
 Score =  365 bits (938), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/407 (46%), Positives = 261/407 (64%), Gaps = 17/407 (4%)
Query: 87  DPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYI 146
           D  + E I +E +RQ  ++ELIASENF S AVMEA GS LTNKY+EG PG+RYYGG E++
Sbjct: 11  DKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRYYGGCEFV 70
Query: 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHL 206
           D  E++   RA A F  +     VNVQP SG  AN  VY   L+  D ++G++L HGGHL
Sbjct: 71  DVTESIAIDRAKALFGAEH----VNVQPHSGPQANMAVYLVALEMGDTVLGMNLSHGGHL 126
Query: 207 SHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDF 266
           +HG   P   V+ +  ++  + Y +D+ T  ++YD + K A+  +PKLI+AGASAY R  
Sbjct: 127 THG--AP---VNFSGKFYNFVEYGVDKDTERINYDEVRKLALEHKPKLIVAGASAYSRTI 181
Query: 267 DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFF 326
           D+ + ++IAD V A LM+DMAHI+GLVAA +  +P +Y D VTTTTHK+LRGPRGGMI  
Sbjct: 182 DFKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRGPRGGMILC 241
Query: 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 386
           K+      E +  I+  +FPG+QGGP  H I   AV    A    FK YQ +VV N + L
Sbjct: 242 KE------EYKKDIDKTIFPGIQGGPLEHVIAAKAVAFGEALENNFKTYQQQVVKNAKVL 295
Query: 387 ASRLVELGYKLVSGGSDNHLVLVDLR-PMGIDGARVEKILDMASITLNKNSVPGDKSA-L 444
           A  L+  G+++VSGG+DNHLV VD++  +G+ G   E+ LD   IT NKN++P D+    
Sbjct: 296 AEALINEGFRIVSGGTDNHLVAVDVKGSIGLTGKEAEETLDSVGITCNKNTIPFDQEKPF 355
Query: 445 VPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSK 491
           V  GIR+G+PA TTRGF EK F  +A  I   ++ + + +KL Q  +
Sbjct: 356 VTSGIRLGTPAATTRGFDEKAFEEVAKIISLALKNSKDEEKLQQAKE 402

>pdb|3H7F|A Chain A, Crystal Structure Of Serine Hydroxymethyltransferase From Mycobacterium Tuberculosis Length = 447

Iteration: 1
 Score =  359 bits (922), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 258/397 (64%), Gaps = 21/397 (5%)
Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           L E DP++ E++ KE  RQ  +LE+IASENF  RAV++A GS LTNKY+EGLPG+RYYGG
Sbjct: 26  LAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGG 85
Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
            E++D +E L + RA A F  +      NVQP SG+ AN  V  A++ P +R++GLDL +
Sbjct: 86  CEHVDVVENLARDRAKALFGAEF----ANVQPHSGAQANAAVLHALMSPGERLLGLDLAN 141
Query: 203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
           GGHL+HG      R++ +   +E+  Y +D +T L+D D +  TA+ FRPK+IIAG SAY
Sbjct: 142 GGHLTHGM-----RLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAY 196
Query: 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
           PR  D+   R IAD VGA L++DMAH +GLVAA +   P  + DVV+TT H +L G R G
Sbjct: 197 PRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHXTLGGGRSG 256
Query: 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382
           +I  K+      +   AIN+AVFPG QGGP  H I G AV LK A +PEF   Q + +S 
Sbjct: 257 LIVGKQ------QYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSG 310
Query: 383 CRALASRLV-----ELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSV 437
            R +A RL+     + G  +VSGG+D HLVLVDLR   +DG   E +L    IT+N+N+V
Sbjct: 311 ARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAV 370
Query: 438 PGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473
           P D +  +V  G+RIG+PA+ TRGF + EF  +AD I
Sbjct: 371 PNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADII 407

>pdb|1DFO|A Chain A, Crystal Structure At 2.4 Angstrom Resolution Of E. Coli Serine Hydroxymethyltransferase In Complex With Glycine And 5-Formyl Tetrahydrofolate Length = 417

Iteration: 1
 Score =  353 bits (905), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 200/393 (50%), Positives = 261/393 (66%), Gaps = 14/393 (3%)
Query: 82  SLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG 141
           ++ + D E+ + + +EK RQ + +ELIASEN+TS  VM+A GS LTNKY+EG PGKRYYG
Sbjct: 7   NIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYG 66
Query: 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP 201
           G EY+D +E L   RA   F  D      NVQP SGS ANF VYTA+L+P D ++G++L 
Sbjct: 67  GCEYVDIVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTALLEPGDTVLGMNLA 122
Query: 202 HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261
           HGGHL+HG  +P   V+ +   +  +PY +D +TG +DY  LEK A   +PK+II G SA
Sbjct: 123 HGGHLTHG--SP---VNFSGKLYNIVPYGID-ATGHIDYADLEKQAKEHKPKMIIGGFSA 176
Query: 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG 321
           Y    D+ +MR+IAD++GA L +DMAH++GLVAA V  +P  +  VVTTTTHK+L GPRG
Sbjct: 177 YSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRG 236
Query: 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 381
           G+I  K       EL   +N+AVFPG QGGP  H I G AV LK A  PEFK YQ +V  
Sbjct: 237 GLILAKGG---SEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAK 293
Query: 382 NCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD- 440
           N +A+    +E GYK+VSGG+DNHL LVDL    + G   +  L  A+IT+NKNSVP D 
Sbjct: 294 NAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDP 353
Query: 441 KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473
           KS  V  GIR+G+PA+T RGF E E   +A ++
Sbjct: 354 KSPFVTSGIRVGTPAITRRGFKEAEAKELAGWM 386

>pdb|1EQB|A Chain A, X-Ray Crystal Structure At 2.7 Angstroms Resolution Of Ternary Complex Between The Y65f Mutant Of E-Coli Serine Hydroxymethyltransferase, Glycine And 5-Formyl Tetrahydrofolate Length = 417

Iteration: 1
 Score =  351 bits (900), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 199/393 (50%), Positives = 261/393 (66%), Gaps = 14/393 (3%)
Query: 82  SLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG 141
           ++ + D E+ + + +EK RQ + +ELIASEN+TS  VM+A GS LTNKY+EG PGKRY+G
Sbjct: 7   NIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYFG 66
Query: 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP 201
           G EY+D +E L   RA   F  D      NVQP SGS ANF VYTA+L+P D ++G++L 
Sbjct: 67  GCEYVDIVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTALLEPGDTVLGMNLA 122
Query: 202 HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261
           HGGHL+HG  +P   V+ +   +  +PY +D +TG +DY  LEK A   +PK+II G SA
Sbjct: 123 HGGHLTHG--SP---VNFSGKLYNIVPYGID-ATGHIDYADLEKQAKEHKPKMIIGGFSA 176
Query: 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG 321
           Y    D+ +MR+IAD++GA L +DMAH++GLVAA V  +P  +  VVTTTTHK+L GPRG
Sbjct: 177 YSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRG 236
Query: 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 381
           G+I  K       EL   +N+AVFPG QGGP  H I G AV LK A  PEFK YQ +V  
Sbjct: 237 GLILAKGG---SEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAK 293
Query: 382 NCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD- 440
           N +A+    +E GYK+VSGG+DNHL LVDL    + G   +  L  A+IT+NKNSVP D 
Sbjct: 294 NAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDP 353
Query: 441 KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473
           KS  V  GIR+G+PA+T RGF E E   +A ++
Sbjct: 354 KSPFVTSGIRVGTPAITRRGFKEAEAKELAGWM 386

>pdb|3G8M|A Chain A, Serine Hydroxymethyltransferase Y55f Mutant Length = 417

Iteration: 1
 Score =  351 bits (900), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 199/393 (50%), Positives = 261/393 (66%), Gaps = 14/393 (3%)
Query: 82  SLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG 141
           ++ + D E+ + + +EK RQ + +ELIASEN+TS  VM+A GS LTNK++EG PGKRYYG
Sbjct: 7   NIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKFAEGYPGKRYYG 66
Query: 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP 201
           G EY+D +E L   RA   F  D      NVQP SGS ANF VYTA+L+P D ++G++L 
Sbjct: 67  GCEYVDIVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTALLEPGDTVLGMNLA 122
Query: 202 HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261
           HGGHL+HG  +P   V+ +   +  +PY +D +TG +DY  LEK A   +PK+II G SA
Sbjct: 123 HGGHLTHG--SP---VNFSGKLYNIVPYGID-ATGHIDYADLEKQAKEHKPKMIIGGFSA 176
Query: 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG 321
           Y    D+ +MR+IAD++GA L +DMAH++GLVAA V  +P  +  VVTTTTHK+L GPRG
Sbjct: 177 YSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRG 236
Query: 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 381
           G+I  K       EL   +N+AVFPG QGGP  H I G AV LK A  PEFK YQ +V  
Sbjct: 237 GLILAKGG---SEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAK 293
Query: 382 NCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD- 440
           N +A+    +E GYK+VSGG+DNHL LVDL    + G   +  L  A+IT+NKNSVP D 
Sbjct: 294 NAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDP 353
Query: 441 KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473
           KS  V  GIR+G+PA+T RGF E E   +A ++
Sbjct: 354 KSPFVTSGIRVGTPAITRRGFKEAEAKELAGWM 386

>pdb|3N0L|A Chain A, Crystal Structure Of Serine Hydroxymethyltransferase From Campylobacter Jejuni Length = 417

Iteration: 1
 Score =  342 bits (876), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 188/393 (47%), Positives = 248/393 (63%), Gaps = 16/393 (4%)
Query: 82  SLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG 141
           SL   D E+ ++  KE ERQ + LE IASENFT   V E  GS LTNKY+EG PGKRYYG
Sbjct: 5   SLEXFDKEIFDLTNKELERQCEGLEXIASENFTLPEVXEVXGSILTNKYAEGYPGKRYYG 64
Query: 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP 201
           G E++DE+ETL  +R    FN    K+  NVQP SGS AN  VY A++ P D+I+G DL 
Sbjct: 65  GCEFVDEIETLAIERCKKLFNC---KFA-NVQPNSGSQANQGVYAALINPGDKILGXDLS 120
Query: 202 HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261
           HGGHL+HG      +VS +   +ES  Y + E  G +DY+ + + A   +PKLI+ GASA
Sbjct: 121 HGGHLTHG-----AKVSSSGKXYESCFYGV-ELDGRIDYEKVREIAKKEKPKLIVCGASA 174
Query: 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG 321
           Y R  D+ + R+IAD +GA L  D+AHI+GLV A     PF Y  VV++TTHK+LRGPRG
Sbjct: 175 YARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPRG 234
Query: 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 381
           G+I    +     EL   IN+A+FPG+QGGP  H I   AV  K   S E+KVY  +V +
Sbjct: 235 GIIXTNDE-----ELAKKINSAIFPGIQGGPLXHVIAAKAVGFKFNLSDEWKVYAKQVRT 289
Query: 382 NCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD- 440
           N + LA+ L +  +KLVS G+DNHLVL         G   +  L  A IT NKN+VPG+ 
Sbjct: 290 NAQVLANVLXDRKFKLVSDGTDNHLVLXSFLDREFSGKDADLALGNAGITANKNTVPGEI 349
Query: 441 KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473
           +S  +  G+R+G+PA+T RGF EKE   ++++I
Sbjct: 350 RSPFITSGLRLGTPALTARGFKEKEXEIVSNYI 382

>pdb|3GBX|A Chain A, Serine Hydroxymethyltransferase From Salmonella Typhimurium Length = 420

Iteration: 1
 Score =  334 bits (856), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 194/392 (49%), Positives = 250/392 (63%), Gaps = 14/392 (3%)
Query: 82  SLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG 141
           ++ + D E+ +   +EK RQ + +ELIASEN+TS  V +A GS LTNKY+EG PGKRYYG
Sbjct: 10  NIADYDAELWQAXEQEKVRQEEHIELIASENYTSPRVXQAQGSQLTNKYAEGYPGKRYYG 69
Query: 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP 201
           G EY+D +E L   RA   F  D      NVQP SGS ANF VYTA+L+P D ++G +L 
Sbjct: 70  GCEYVDVVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTALLQPGDTVLGXNLA 125
Query: 202 HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261
            GGHL+HG  +P   V+ +   +  +PY +DES G +DYD   K A   +PK II G SA
Sbjct: 126 QGGHLTHG--SP---VNFSGKLYNIVPYGIDES-GKIDYDEXAKLAKEHKPKXIIGGFSA 179
Query: 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG 321
           Y    D+ + R+IAD++GA L +D AH++GL+AA V  +P  +  VVTTTTHK+L GPRG
Sbjct: 180 YSGVVDWAKXREIADSIGAYLFVDXAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRG 239
Query: 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 381
           G+I  K       EL   +N+AVFP  QGGP  H I G AV LK A  PEFKVYQ +V  
Sbjct: 240 GLILAKGGDE---ELYKKLNSAVFPSAQGGPLXHVIAGKAVALKEAXEPEFKVYQQQVAK 296
Query: 382 NCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD- 440
           N +A     +  GYK+VSGG++NHL L+DL    + G   +  L  A+IT+NKNSVP D 
Sbjct: 297 NAKAXVEVFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDP 356
Query: 441 KSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 472
           KS  V  GIRIGSPA+T RGF E E   +A +
Sbjct: 357 KSPFVTSGIRIGSPAVTRRGFKEAEVKELAGW 388

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	529
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	0.0
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	0.0
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	0.0
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	0.0
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	0.0
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	0.0
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	0.0
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	0.0
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	9e-14
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-07
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	4e-07

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A* Length = 483

 Score =  821 bits (2123), Expect = 0.0
 Identities = 272/463 (58%), Positives = 334/463 (72%), Gaps = 9/463 (1%)

Query: 76  SSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLP 135
              +   L ++D EV +II KE  RQ   LELIASENF SRAV+EA+GSCL NKYS G P
Sbjct: 18  EQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLGYP 77

Query: 136 GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRI 195
           G+RYYGG E+IDELETLCQKRAL A+ LD   WGVNVQP SGSPANF VYTA+++PH RI
Sbjct: 78  GQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRI 137

Query: 196 MGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255
           MGLDLP GGHL+HGFMT K+++S TSI+FESM Y+++  TG +DYD LE+ A LF PKLI
Sbjct: 138 MGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLI 197

Query: 256 IAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKS 315
           IAG S Y R+ DY R+R+IAD  GA LM DMAHISGLV A VV  PF++C VVTTTTHK+
Sbjct: 198 IAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKT 257

Query: 316 LRGPRGGMIFFKKDP---------VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366
           LRG R GMIF+++            +   LES IN+AVFPGLQGGPHNH I G+AV LK 
Sbjct: 258 LRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQ 317

Query: 367 AQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILD 426
           A +PEFK YQ +VV+NCRAL++ LVELGYK+V+GGSDNHL+LVDLR  G DG R EK+L+
Sbjct: 318 AMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLE 377

Query: 427 MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKL 486
             SI  NKN+ PGDKSAL P G+R+G+PA+T+RG  EK+F  +A FIH G+E+T++ +  
Sbjct: 378 ACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQDD 437

Query: 487 VQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
                         + +      V  LR  VE+    FP+PG+
Sbjct: 438 TGPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPGL 480

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} SCOP: c.67.1.4 PDB: 3ou5_A Length = 490

 Score =  818 bits (2114), Expect = 0.0
 Identities = 272/479 (56%), Positives = 344/479 (71%), Gaps = 12/479 (2%)

Query: 59  RPPSSVSVPIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAV 118
           R   S +        +       SL ++DPE+ E++ +EK+RQ + LELIASENF SRA 
Sbjct: 11  RAQHSNAAQTQTGEANRGWTGQESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAA 70

Query: 119 MEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178
           +EA+GSCL NKYSEG PGKRYYGG E +DE+E LCQ+RAL AF+LD  +WGVNVQP SGS
Sbjct: 71  LEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS 130

Query: 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 238
           PAN  VYTA+L+PHDRIMGLDLP GGHL+HG+M+  +R+S TSI+FESMPY+L+  TGL+
Sbjct: 131 PANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLI 190

Query: 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298
           DY+ L  TA LFRP+LIIAG SAY R  DY RMR++ D V A L+ DMAHISGLVAA V+
Sbjct: 191 DYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVI 250

Query: 299 ADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDP---------VLGVELESAINNAVFPGLQ 349
             PFK+ D+VTTTTHK+LRG R G+IF++K            +    E  IN AVFP LQ
Sbjct: 251 PSPFKHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQ 310

Query: 350 GGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 409
           GGPHNH I  +AV LK A +P F+ Y  +V+ N RA+A  L+E GY LVSGG+DNHLVLV
Sbjct: 311 GGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLV 370

Query: 410 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 469
           DLRP G+DGAR E++L++ SIT NKN+ PGD+SA+ PGG+R+G+PA+T+R F E +F  +
Sbjct: 371 DLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRV 430

Query: 470 ADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 528
            DFI EGV I LE K   + +KLQDF +F+   +      +A+LR RVE     FP+PG
Sbjct: 431 VDFIDEGVNIGLEVKS--KTAKLQDFKSFLLK-DSETSQRLANLRQRVEQFARAFPMPG 486

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus} Length = 407

 Score =  581 bits (1500), Expect = 0.0
 Identities = 202/447 (45%), Positives = 262/447 (58%), Gaps = 43/447 (9%)

Query: 82  SLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG 141
           S  + D  + E+I  E++RQ + LELIASENF S+ V EAVGS LTNKY+EG PG RYYG
Sbjct: 3   STLKRDEALFELIALEEKRQREGLELIASENFVSKQVREAVGSVLTNKYAEGYPGARYYG 62

Query: 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP 201
           G E ID +E+L  +RA A F         NVQP SGS AN  VY A+++P D +MG+DL 
Sbjct: 63  GCEVIDRVESLAIERAKALFGAAW----ANVQPHSGSQANMAVYMALMEPGDTLMGMDLA 118

Query: 202 HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261
            GGHL+HG    +   SG    ++ + Y +   T L+D + + + A+  RPK+I+AGASA
Sbjct: 119 AGGHLTHGS---RVNFSG--KLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASA 173

Query: 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG 321
           YPR +D+   R+IAD VGA L++DMAH +GLVAA +  +P  Y  VVT+TTHK+LRGPRG
Sbjct: 174 YPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRG 233

Query: 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 381
           G+I          EL   I+  +FPG+QGGP  H I G AV    A  PEFK Y   VV 
Sbjct: 234 GLILSNDP-----ELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVE 288

Query: 382 NCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD- 440
           N + LA  L   GY++V+GG+DNHL LVDLRP G+ G   E+ LD   IT+NKN++P D 
Sbjct: 289 NAKRLAEELARRGYRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDP 348

Query: 441 KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVT 500
           K   V  GIRIG+PA+TTRGF+ +E   +A+ I       L                   
Sbjct: 349 KPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDR----ALLEG---------------- 388

Query: 501 SPNFSLMNNVADLRGRVEALTTQFPIP 527
                       LR  V  L    P+P
Sbjct: 389 --------PSEALREEVRRLALAHPMP 407

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei} Length = 425

 Score =  581 bits (1499), Expect = 0.0
 Identities = 207/454 (45%), Positives = 269/454 (59%), Gaps = 34/454 (7%)

Query: 74  DGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEG 133
           + + F   SL E D  V   I KE ERQ   +ELIASEN  SRAV++A GS LTNKY+EG
Sbjct: 4   NANPFFSQSLAERDASVRGAILKELERQQSQVELIASENIVSRAVLDAQGSVLTNKYAEG 63

Query: 134 LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD 193
            PGKRYYGG E+ DE+E L  +R    FN        NVQP SG+ AN  V  A+ KP D
Sbjct: 64  YPGKRYYGGCEFADEVEALAIERVKRLFNAGH----ANVQPHSGAQANGAVMLALAKPGD 119

Query: 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK 253
            ++G+ L  GGHL+HG    K  +SG   +F ++ Y +   T L+DYD +E  A   +P 
Sbjct: 120 TVLGMSLDAGGHLTHGA---KPALSG--KWFNALQYGVSRDTMLIDYDQVEALAQQHKPS 174

Query: 254 LIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH 313
           LIIAG SAYPR  D+ R R IAD+VGA LM+DMAHI+G++AA   A+P ++  VVT+TTH
Sbjct: 175 LIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTH 234

Query: 314 KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373
           K+LRGPRGG +    +     E+   IN+AVFPGLQGGP  H I G AV    A + +FK
Sbjct: 235 KTLRGPRGGFVLTNDE-----EIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFK 289

Query: 374 VYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN 433
            Y ++V++N +AL   L   G  LV+GG+DNHL+LVDLRP G+ GA+VE+ L+ A IT N
Sbjct: 290 TYIDRVLANAQALGDVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCN 349

Query: 434 KNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKL 492
           KN +P D +   +  GIR+G+PA TTRGF   EF  +   I E      EA +       
Sbjct: 350 KNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILE----VFEALRTNPEGDH 405

Query: 493 QDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPI 526
                               +R  + AL  +FPI
Sbjct: 406 A---------------TEQRVRREIFALCERFPI 424

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} PDB: 1dfo_A* 3g8m_A* 1eqb_A* Length = 420

 Score =  581 bits (1499), Expect = 0.0
 Identities = 200/450 (44%), Positives = 272/450 (60%), Gaps = 38/450 (8%)

Query: 80  DYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRY 139
           + ++ + D E+ + + +EK RQ + +ELIASEN+TS  VM+A GS LTNKY+EG PGKRY
Sbjct: 8   EMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRY 67

Query: 140 YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLD 199
           YGG EY+D +E L   RA   F  D      NVQP SGS ANF VYTA+L+P D ++G++
Sbjct: 68  YGGCEYVDVVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTALLQPGDTVLGMN 123

Query: 200 LPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259
           L  GGHL+HG        SG    +  +PY +DE +G +DYD + K A   +PK+II G 
Sbjct: 124 LAQGGHLTHG---SPVNFSG--KLYNIVPYGIDE-SGKIDYDEMAKLAKEHKPKMIIGGF 177

Query: 260 SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGP 319
           SAY    D+ +MR+IAD++GA L +DMAH++GL+AA V  +P  +  VVTTTTHK+L GP
Sbjct: 178 SAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGP 237

Query: 320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV 379
           RGG+I  K       EL   +N+AVFP  QGGP  H I G AV LK A  PEFKVYQ +V
Sbjct: 238 RGGLILAKGG---DEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQV 294

Query: 380 VSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPG 439
             N +A+    +  GYK+VSGG++NHL L+DL    + G   +  L  A+IT+NKNSVP 
Sbjct: 295 AKNAKAMVEVFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPN 354

Query: 440 D-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNF 498
           D KS  V  GIRIGSPA+T RGF E E   +A ++ + ++                    
Sbjct: 355 DPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLD-------------------- 394

Query: 499 VTSPNFSLMNNVADLRGRVEALTTQFPIPG 528
               N +    +  ++ +V  +  +FP+  
Sbjct: 395 ----NINDEATIERVKAKVLDICARFPVYA 420

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} Length = 417

 Score =  578 bits (1491), Expect = 0.0
 Identities = 191/446 (42%), Positives = 265/446 (59%), Gaps = 40/446 (8%)

Query: 82  SLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG 141
           SL   D E+ ++  KE ERQ + LE+IASENFT   VME +GS LTNKY+EG PGKRYYG
Sbjct: 5   SLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYG 64

Query: 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP 201
           G E++DE+ETL  +R    FN        NVQP SGS AN  VY A++ P D+I+G+DL 
Sbjct: 65  GCEFVDEIETLAIERCKKLFNCKF----ANVQPNSGSQANQGVYAALINPGDKILGMDLS 120

Query: 202 HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261
           HGGHL+HG    K   SG    +ES  Y ++   G +DY+ + + A   +PKLI+ GASA
Sbjct: 121 HGGHLTHG---AKVSSSG--KMYESCFYGVEL-DGRIDYEKVREIAKKEKPKLIVCGASA 174

Query: 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG 321
           Y R  D+ + R+IAD +GA L  D+AHI+GLV A     PF Y  VV++TTHK+LRGPRG
Sbjct: 175 YARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPRG 234

Query: 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 381
           G+I    +     EL   IN+A+FPG+QGGP  H I   AV  K   S E+KVY  +V +
Sbjct: 235 GIIMTNDE-----ELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRT 289

Query: 382 NCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD- 440
           N + LA+ L++  +KLVS G+DNHLVL+        G   +  L  A IT NKN+VPG+ 
Sbjct: 290 NAQVLANVLMDRKFKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEI 349

Query: 441 KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVT 500
           +S  +  G+R+G+PA+T RGF EKE   ++++I + ++                      
Sbjct: 350 RSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILD---------------------- 387

Query: 501 SPNFSLMNNVADLRGRVEALTTQFPI 526
             + +      +++  ++ L + F I
Sbjct: 388 --DVNNEKLQENIKQELKKLASNFII 411

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ... Length = 405

 Score =  576 bits (1488), Expect = 0.0
 Identities = 195/395 (49%), Positives = 257/395 (65%), Gaps = 16/395 (4%)

Query: 82  SLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG 141
            L + DP+V   I +E++RQ   +ELIASENF SRAVMEA GS LTNKY+EG PG+RYYG
Sbjct: 3   YLPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYG 62

Query: 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP 201
           G EY+D +E L ++RA   F  +      NVQP SG+ AN  VY  +L+  D ++G++L 
Sbjct: 63  GCEYVDIVEELARERAKQLFGAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLS 118

Query: 202 HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261
           HGGHL+HG       V+ + + +  + Y +D  T ++DYD + + A L RPKLI+A A+A
Sbjct: 119 HGGHLTHGS-----PVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAAAA 173

Query: 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG 321
           YPR  D+ + R+IAD VGA LM+DMAHI+GLVAA +  +P  Y   VTTTTHK+LRGPRG
Sbjct: 174 YPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRG 233

Query: 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 381
           GMI  ++      +    I+ A+FPG+QGGP  H I   AV    A   +FK Y  +VV 
Sbjct: 234 GMILCQE------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVD 287

Query: 382 NCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD- 440
           N + LAS L   G+ LVSGG+DNHL+LVDLRP  + G   EK+LD   IT+NKN++P D 
Sbjct: 288 NAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDP 347

Query: 441 KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475
           +S  V  GIRIG+ A+TTRGF  +E   IA  I  
Sbjct: 348 ESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGL 382

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis} Length = 447

 Score =  578 bits (1491), Expect = 0.0
 Identities = 201/459 (43%), Positives = 270/459 (58%), Gaps = 46/459 (10%)

Query: 74  DGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEG 133
            G   +   L E DP++ E++ KE  RQ  +LE+IASENF  RAV++A GS LTNKY+EG
Sbjct: 17  QGPGSMSAPLAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEG 76

Query: 134 LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD 193
           LPG+RYYGG E++D +E L + RA A F  +      NVQP SG+ AN  V  A++ P +
Sbjct: 77  LPGRRYYGGCEHVDVVENLARDRAKALFGAEF----ANVQPHSGAQANAAVLHALMSPGE 132

Query: 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK 253
           R++GLDL +GGHL+HG    +   SG    +E+  Y +D +T L+D D +  TA+ FRPK
Sbjct: 133 RLLGLDLANGGHLTHGM---RLNFSGK--LYENGFYGVDPATHLIDMDAVRATALEFRPK 187

Query: 254 LIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH 313
           +IIAG SAYPR  D+   R IAD VGA L++DMAH +GLVAA +   P  + DVV+TT H
Sbjct: 188 VIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVH 247

Query: 314 KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373
           K+L G R G+I  K+      +   AIN+AVFPG QGGP  H I G AV LK A +PEF 
Sbjct: 248 KTLGGGRSGLIVGKQ------QYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFA 301

Query: 374 VYQNKVVSNCRALASRLV-----ELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMA 428
             Q + +S  R +A RL+     + G  +VSGG+D HLVLVDLR   +DG   E +L   
Sbjct: 302 DRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEV 361

Query: 429 SITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLV 487
            IT+N+N+VP D +  +V  G+RIG+PA+ TRGF + EF  +AD I   +          
Sbjct: 362 GITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALATGSSVD--- 418

Query: 488 QGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPI 526
                                 V+ L+ R   L   FP+
Sbjct: 419 ----------------------VSALKDRATRLARAFPL 435

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A* Length = 456

 Score = 72.5 bits (177), Expect = 9e-14
 Identities = 56/346 (16%), Positives = 99/346 (28%), Gaps = 55/346 (15%)

Query: 98  KERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157
           +E  + +  L + + +          +    +++  + G   Y G+E    LE     R 
Sbjct: 29  QEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMMMGDEAYAGSENFYHLE-----RT 83

Query: 158 LAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMG---LDLPHGGHLSHGFMTPK 214
           +      ++    +     G  A   +    +KP   + G             +G     
Sbjct: 84  VQELFGFKHIVPTH----QGRGAENLLSQLAIKPGQYVAGNMYFTTTRYHQEKNGA---- 135

Query: 215 RRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI----------IAGASAYPR 264
                                G +D   L+K       + I          +AG      
Sbjct: 136 -VFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSM 194

Query: 265 DFDYPRMRQIADAVGALLMMDMAHISG--------------LVAASVVADPFKYCDVVTT 310
             +   +R++ +A G  +  D                       A +V + F Y D  T 
Sbjct: 195 A-NMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTM 253

Query: 311 TTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL----QGGPHNHTIGGLAVCLKH 366
           +  K      GG +    D     E+ S+    V         GG     +  +A+ L+ 
Sbjct: 254 SGKKDCLVNIGGFLCMNDD-----EMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLRE 308

Query: 367 AQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLR 412
           A   E   Y    V   R L  +L   G  +V      H V +D R
Sbjct: 309 AMQYE---YIEHRVKQVRYLGDKLKAAGVPIVE-PVGGHAVFLDAR 350

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.5 bits (125), Expect = 3e-07
 Identities = 58/413 (14%), Positives = 115/413 (27%), Gaps = 123/413 (29%)

Query: 80  DYSLGEADPEVCEIITKEKERQFKSLELIAS-ENFTSRAVMEAVGSCLTNKYSEGLPGKR 138
           D        E  + I   K+    +L L  +  +     V + V   L   Y        
Sbjct: 40  DMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINY-------- 91

Query: 139 YYGGNEYI-DELETLCQKRAL--AAFNLDENKWGVNVQPLSGSPAN---FEVYTAI---- 188
                +++   ++T  ++ ++    +    ++   + Q  +    N    + Y  +    
Sbjct: 92  -----KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA--KYNVSRLQPYLKLRQAL 144

Query: 189 --LKPHDRI----MG------------LDLPHGGHLSHG-F-MTPKRRVSGTSI--YFES 226
             L+P   +    +             L       +    F +  K   S  ++    + 
Sbjct: 145 LELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQK 204

Query: 227 MPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYPRDF----DYPRMRQIADAVGAL 281
           + Y++D + T   D+            KL I    A  R       Y            L
Sbjct: 205 LLYQIDPNWTSRSDHS--------SNIKLRIHSIQAELRRLLKSKPYEN---------CL 247

Query: 282 LMMDMAHISGLVAASVVADPFKY-CDVVTTT--------------THKSLRGPRGGMIFF 326
           L++   +    V  +   + F   C ++ TT              TH SL          
Sbjct: 248 LVLL--N----VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMT---L 298

Query: 327 KKDPVLGVELESAINNAVF--P--GLQGGPHNHTIGGLAVCLKHAQSPEFKV-YQNKVVS 381
             D V  + L   ++      P   L   P         + +      +    + N    
Sbjct: 299 TPDEVKSL-LLKYLDCRPQDLPREVLTTNP-------RRLSIIAESIRDGLATWDNWKHV 350

Query: 382 NCRALASRLVELGYKLVSGGSDNHLVLVDLRPM----GI--DGARV-EKILDM 427
           NC  L + ++E           N L   + R M     +    A +   +L +
Sbjct: 351 NCDKL-TTIIESSL--------NVLEPAEYRKMFDRLSVFPPSAHIPTILLSL 394

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2 Length = 467

 Score = 51.7 bits (123), Expect = 4e-07
 Identities = 46/269 (17%), Positives = 78/269 (28%), Gaps = 35/269 (13%)

Query: 176 SGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKR-RVSGTSIYFESMPYRLDES 234
            G  A   ++  +LK   +      P      H   T     ++G            D  
Sbjct: 99  QGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSE 158

Query: 235 T-----GLVDYDMLEKTAILFRPKLIIA---------GASAYPRDFDYPR-MRQIADAVG 279
           T     G  D   L++  I       I           A   P      + + +IA   G
Sbjct: 159 TYDDWKGDFDIKKLKE-NIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHG 217

Query: 280 ALLMMDMAHI--------------SGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIF 325
             ++MD A                       V+ D +KY D +T +  K      GG++ 
Sbjct: 218 IFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIGGLVA 277

Query: 326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 385
            + +  +                 GG     +  +   L+     E   Y +  +   + 
Sbjct: 278 IRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEEE---YLHYRIGQVKY 334

Query: 386 LASRLVELGYKLVSGGSDNHLVLVDLRPM 414
           L  RL E G  +    +  H V VD + +
Sbjct: 335 LGDRLREAGIPIQY-PTGGHAVFVDCKKL 362

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	529
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	100.0
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	100.0
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	100.0
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	100.0
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	100.0
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	100.0
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	100.0
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	100.0
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	100.0
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	99.96
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	99.96
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	99.96
1iug_A	352	Putative aspartate aminotransferase; wild type, py	99.96
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	99.96
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	99.96
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	99.96
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	99.96
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	99.96
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	99.95
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	99.95
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	99.95
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	99.95
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	99.95
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	99.95
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	99.95
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	99.95
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	99.95
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	99.95
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	99.95
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	99.95
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	99.95
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	99.95
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	99.95
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	99.95
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	99.95
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	99.95
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	99.95
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	99.95
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	99.95
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	99.95
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	99.95
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	99.95
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	99.95
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	99.95
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	99.95
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	99.95
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	99.95
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	99.94
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	99.94
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	99.94
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	99.94
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	99.94
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	99.94
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	99.94
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	99.94
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	99.94
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	99.94
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	99.94
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	99.94
3nra_A	407	Aspartate aminotransferase; structural genomics, j	99.94
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	99.94
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	99.94
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	99.94
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	99.94
3ele_A	398	Amino transferase; RER070207001803, structural gen	99.94
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	99.94
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	99.94
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	99.94
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	99.94
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	99.94
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	99.94
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	99.94
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.94
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.94
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	99.94
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	99.93
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	99.93
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	99.93
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	99.93
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	99.93
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.93
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	99.93
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	99.93
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	99.93
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.93
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.93
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.93
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	99.93
3rq1_A	418	Aminotransferase class I and II; structural genomi	99.93
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.93
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.93
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	99.93
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	99.93
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.93
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	99.93
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.93
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	99.93
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	99.92
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	99.92
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	99.92
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	99.92
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	99.92
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.92
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.92
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.92
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.92
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	99.92
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	99.92
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.92
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	99.92
1vp4_A	425	Aminotransferase, putative; structural genomics, j	99.92
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	99.92
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.92
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.92
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.92
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.92
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.91
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	99.91
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	99.91
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	99.91
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.91
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	99.91
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.91
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	99.91
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	99.91
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.91
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	99.91
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	99.91
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	99.91
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.91
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.91
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	99.91
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.91
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	99.9
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	99.9
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	99.9
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	99.9
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	99.9
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	99.9
1svv_A	359	Threonine aldolase; structural genomics, structura	99.9
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.9
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.9
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.9
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	99.9
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	99.89
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.89
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	99.82
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	99.89
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	99.89
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	99.89
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	99.89
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	99.89
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	99.89
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.88
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.88
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	99.88
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.88
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	99.88
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.88
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	99.88
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.88
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	99.88
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	99.88
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	99.88
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.88
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	99.87
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	99.87
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	99.87
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	99.87
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	99.87
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.87
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	99.87
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.87
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	99.87
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.87
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	99.86
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	99.86
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.86
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	99.86
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.86
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.86
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	99.86
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.86
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	99.85
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.85
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.85
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.85
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	99.85
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	99.84
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	99.84
1z7d_A	433	Ornithine aminotransferase; structural genomics co	99.84
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.84
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.84
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.84
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	99.83
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	99.83
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	99.83
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.83
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	99.83
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.83
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	99.83
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	99.82
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.82
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	99.81
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	99.8
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	99.8
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	99.79
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.79
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.79
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	99.79
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.79
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.79
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	99.78
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	99.78
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	99.77
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	99.77
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	99.76
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	99.76
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.76
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	99.75
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	99.75
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.75
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	99.74
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	99.74
3hmu_A	472	Aminotransferase, class III; structural genomics,	99.74
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	99.74
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.73
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	99.73
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	99.72
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.71
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	99.62
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	99.5
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	99.21
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	99.29
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.07
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	98.98

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=100.00  E-value=7.2e-101  Score=788.02  Aligned_cols=450  Identities=60%  Similarity=1.014  Sum_probs=387.3

Q ss_pred             chhhhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 009673           77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR  156 (529)
Q Consensus        77 ~~~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~  156 (529)
                      +..++.|.+.||+++++|++|..||+++|+||||||++|+.|++|++|.|+|||+|||||.|||+||+++|++|.+|++|
T Consensus        29 ~~~~~~l~~~Dpei~~~i~~E~~RQ~~~ieLIASEN~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~r  108 (490)
T 3ou5_A           29 WTGQESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRR  108 (490)
T ss_dssp             CSSCCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHH
T ss_pred             cccccchhhhCHHHHHHHHHHHHHHHcCceEecCCCcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHH
Confidence            33568899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCC
Q 009673          157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG  236 (529)
Q Consensus       157 la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~  236 (529)
                      ++++||+++++|+|||||+||+.||++++.+|++|||+||.+++.+|||+|||+.+..+.++++|.+|++++|++|++++
T Consensus       109 ak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~  188 (490)
T 3ou5_A          109 ALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTG  188 (490)
T ss_dssp             HHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEETTTT
T ss_pred             HHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCC
Confidence            99999999999999999999999999999999999999999999999999999877666889999999999999999999


Q ss_pred             CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccc
Q 009673          237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL  316 (529)
Q Consensus       237 ~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l  316 (529)
                      .||+|++++++.++|||+||++.|.||+.+|++++++||++.|++|++|+||.+|+|+.+.+++|+++||||++||||+|
T Consensus       189 ~IDyd~~~~~A~~~kPklIi~G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~ADvVTtTTHKTL  268 (490)
T 3ou5_A          189 LIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTL  268 (490)
T ss_dssp             EECHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSSTT
T ss_pred             cccHHHHHHHHhhcCCCeEEECCccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccccceEEeccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCeEEEeeCCCc---------chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 009673          317 RGPRGGMIFFKKDPV---------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA  387 (529)
Q Consensus       317 ~GprgG~i~~~~~~~---------~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~  387 (529)
                      +|||||+|+++++..         ..+++.++|++++||++||+|++|.|||+++||++++.++|++|++|+++|++.|+
T Consensus       269 rGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA  348 (490)
T 3ou5_A          269 RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMA  348 (490)
T ss_dssp             CSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHH
Confidence            999999999997420         12367889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673          388 SRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV  467 (529)
Q Consensus       388 ~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~  467 (529)
                      +.|.+.|+++++++|++|++++|+++.++++..+++.|+++||.+|+|.+|+|.+++.++||||||+++|||||+++||+
T Consensus       349 ~~L~~~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~  428 (490)
T 3ou5_A          349 DALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFR  428 (490)
T ss_dssp             HHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHH
T ss_pred             HHHHhCCCeeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999989999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 009673          468 AIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV  529 (529)
Q Consensus       468 ~la~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~  529 (529)
                      +++++|.+++....++++..  .+++||+..+..+. .....+++||++|.+||++||+|||
T Consensus       429 ~IA~~I~~~l~~~~~~~~~~--~kl~~f~~~~~~~~-~~~~~i~~lr~~V~~l~~~FP~pg~  487 (490)
T 3ou5_A          429 RVVDFIDEGVNIGLEVKSKT--AKLQDFKSFLLKDS-ETSQRLANLRQRVEQFARAFPMPGF  487 (490)
T ss_dssp             HHHHHHHHHHHHHHHHHHTC--CSHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHTTSCCSSC
T ss_pred             HHHHHHHHHHHhhhhhhhhh--hhhHHHHHHHhcCc-ccHHHHHHHHHHHHHHHHhCCCCCC
Confidence            99999999999998888765  36789987653322 1114689999999999999999997

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=100.00  E-value=2.7e-73  Score=608.14  Aligned_cols=447  Identities=60%  Similarity=1.028  Sum_probs=367.9

Q ss_pred             hhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 009673           80 DYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALA  159 (529)
Q Consensus        80 ~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~  159 (529)
                      ++.|.+.||++++++++|..||++.|+|++|||++|++|++||.+.++++|++|||++|||+|+++++++|+++++++++
T Consensus        32 ~~~l~~~d~~~~~~~~~e~~rq~~~i~lias~n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~  111 (490)
T 2a7v_A           32 QESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALE  111 (490)
T ss_dssp             CCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHH
T ss_pred             cchhhhcCHHHHHHHHHHHHHHHcCceEECCCCCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHH
Confidence            46688999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCC
Q 009673          160 AFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD  239 (529)
Q Consensus       160 ~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD  239 (529)
                      +||+++++|+++|+++||++||.+++.++++|||+|+++++.|++|++|++....+.+.+.|..+++++++++++++.+|
T Consensus       112 l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD  191 (490)
T 2a7v_A          112 AFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLID  191 (490)
T ss_dssp             HTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBC
T ss_pred             HcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcC
Confidence            99999887777899999999999999999999999999999999999998754333455677777788888887789999


Q ss_pred             HHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCC
Q 009673          240 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGP  319 (529)
Q Consensus       240 ~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gp  319 (529)
                      +|+|++.+.+++||+|+++.++||+..|+++|++||++||++|++|++|++|+++.+..+.+++++|++++|+||+|+||
T Consensus       192 ~d~le~~l~~~~~klIi~~~s~~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~~aDiv~~S~hK~l~Gp  271 (490)
T 2a7v_A          192 YNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGA  271 (490)
T ss_dssp             HHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCSC
T ss_pred             HHHHHHHHhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCCCCCEEEECCcccCccc
Confidence            99999999876899999999999999999999999999999999999999999888777777778999999999999999


Q ss_pred             CCeEEEeeCCCc---------chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 009673          320 RGGMIFFKKDPV---------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL  390 (529)
Q Consensus       320 rgG~i~~~~~~~---------~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L  390 (529)
                      +||+|+++++..         ..+++.+++++..+++.+|+|+++.++|+++|++++..+++++|.+++.+|+++|++.|
T Consensus       272 ~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L  351 (490)
T 2a7v_A          272 RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADAL  351 (490)
T ss_dssp             SCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence            999999987410         01146778888889999999999999999999998877788999999999999999999


Q ss_pred             HhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673          391 VELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA  470 (529)
Q Consensus       391 ~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la  470 (529)
                      .+.|++++.+++++|++++++++.++++.++.+.|+++||.++++.+|++.+|+.+++||||++++|++|++++||++++
T Consensus       352 ~~~G~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~  431 (490)
T 2a7v_A          352 LERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVV  431 (490)
T ss_dssp             HHTTCEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHH
T ss_pred             HHcCcEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHH
Confidence            99999998777789999999988888899999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 009673          471 DFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV  529 (529)
Q Consensus       471 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~  529 (529)
                      ++|.+++.+..++|++.  ++++||++.+++++ .....+.+||++|.+||++||+|+|
T Consensus       432 ~~i~~~l~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~  487 (490)
T 2a7v_A          432 DFIDEGVNIGLEVKSKT--AKLQDFKSFLLKDS-ETSQRLANLRQRVEQFARAFPMPGF  487 (490)
T ss_dssp             HHHHHHHHHHHHHHHHC--CSHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHTTSCCSSC
T ss_pred             HHHHHHHHhhhhhhhhh--chhhHHHhhhccCh-hhHHHHHHHHHHHHHHHHhCCCCCc
Confidence            99999999999888776  56899999886543 0012588999999999999999986

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=100.00  E-value=4e-65  Score=547.68  Aligned_cols=452  Identities=61%  Similarity=1.012  Sum_probs=393.1

Q ss_pred             chhhhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 009673           77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR  156 (529)
Q Consensus        77 ~~~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~  156 (529)
                      .++++++...||++++.+.++..+|++.|+|++++|++|+.|++++.+.+.++|++|||+.+||+|++.++++|+.++++
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~a~e~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~   98 (483)
T 1rv3_A           19 QMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKR   98 (483)
T ss_dssp             HHTTSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHH
T ss_pred             HHHhhhhhhcCHHHHHHHHHHHHHhhcCeEEEcCCCCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHH
Confidence            44556788899999999999999998999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCC
Q 009673          157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG  236 (529)
Q Consensus       157 la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~  236 (529)
                      ++++||+++++|.++|+++||++||.+++.++++|||+|++++++|++|++|++..+...+.+.|..++.++++++++++
T Consensus        99 ~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~  178 (483)
T 1rv3_A           99 ALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTG  178 (483)
T ss_dssp             HHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTC
T ss_pred             HHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCC
Confidence            99999999877767899999999999999999999999999999999999999877666677777767888888887789


Q ss_pred             CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccc
Q 009673          237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL  316 (529)
Q Consensus       237 ~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l  316 (529)
                      .+|+|+|++++++.+||+|+++.++++...|+++|++||+++|++|++|++|+.|+++.+..++|++++|++++|+||+|
T Consensus       179 ~iD~d~le~~i~~~~tklIi~~~sn~~~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~K~l  258 (483)
T 1rv3_A          179 YIDYDRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTL  258 (483)
T ss_dssp             SBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSGGG
T ss_pred             cCCHHHHHHHHhhcCCcEEEEeCCcCCCcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecCcccC
Confidence            99999999999855999999966667778899999999999999999999999999888877777778999999999999


Q ss_pred             cCCCCeEEEeeCCCc---------chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 009673          317 RGPRGGMIFFKKDPV---------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA  387 (529)
Q Consensus       317 ~GprgG~i~~~~~~~---------~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~  387 (529)
                      +|||||+++++++..         ..+++.++++...+++.+|+|+.+.++++++|++++...+++++.+++.++++++.
T Consensus       259 ~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~  338 (483)
T 1rv3_A          259 RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALS  338 (483)
T ss_dssp             CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHH
Confidence            999999999998421         00024556666678888999999999999999998876788999999999999999


Q ss_pred             HHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673          388 SRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV  467 (529)
Q Consensus       388 ~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~  467 (529)
                      +.|.+.|++++.+++++|+++++++..++++.++.+.|+++||.++++++||+..++.+++||||++.+|+||++++|++
T Consensus       339 ~~L~~~g~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~  418 (483)
T 1rv3_A          339 AALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQ  418 (483)
T ss_dssp             HHHHHTTCEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHH
T ss_pred             HHHHhcCCEeccCCCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHH
Confidence            99999999998876678889999977677888899999999999998878887656678899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhc-ccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 009673          468 AIADFIHEGVEITLEAKKLVQ-GSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV  529 (529)
Q Consensus       468 ~la~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~  529 (529)
                      +++++|.+++....+++.... .+++++|++.++++. ...+.++++|++|.+||++||+|+|
T Consensus       419 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  480 (483)
T 1rv3_A          419 KVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGDE-KHQRAVRALRQEVESFAALFPLPGL  480 (483)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHSCH-HHHHHHHHHHHHHHHHHTTSCCCSS
T ss_pred             HHHHHHHHHHHhccchhccccccchhhHHHHhhcccc-chhHHHHHHHHHHHHHHHhCCCCCc
Confidence            999999999987555554332 237899999886442 0012688999999999999999986

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4.9e-52  Score=441.77  Aligned_cols=408  Identities=49%  Similarity=0.791  Sum_probs=346.7

Q ss_pred             hhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 009673           80 DYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALA  159 (529)
Q Consensus        80 ~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~  159 (529)
                      ...+...+|++++.+.++..++.+.|+|++++|++++.|++++.+.+.++|.+||++.|||.|++..+.+|+++++++++
T Consensus        23 ~~~l~~~~~~i~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~  102 (447)
T 3h7f_A           23 SAPLAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKA  102 (447)
T ss_dssp             GCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCHHHHHHHHHHHHHHhCceeEecCCCCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHH
Confidence            45678889999999998888888999999999999999999999999889999999999999999999999888899999


Q ss_pred             HcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCC
Q 009673          160 AFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD  239 (529)
Q Consensus       160 ~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD  239 (529)
                      ++|++.    ++|+++||++|+..++.++++|||+|+++++.|++|+++++     .+...|..+..++++++++++.+|
T Consensus       103 ~~g~~~----~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~d  173 (447)
T 3h7f_A          103 LFGAEF----ANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGM-----RLNFSGKLYENGFYGVDPATHLID  173 (447)
T ss_dssp             HHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTC-----TTSHHHHSSEEEEECCCTTTCSCC
T ss_pred             HcCCCc----eEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhh-----hhhhcCCeeEEEEcCcCcccCCcC
Confidence            999986    46667999999999999999999999999999988777664     233445556778888876778999


Q ss_pred             HHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCC
Q 009673          240 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGP  319 (529)
Q Consensus       240 ~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gp  319 (529)
                      +++|++.+...++++|+++.++||+..++++|+++|++||++||+|++|+.|++..+..+.+++++|++++|+||+|+||
T Consensus       174 ~~~l~~~i~~~~~~~i~~~~~~~~~~~~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~~di~~~s~sK~l~G~  253 (447)
T 3h7f_A          174 MDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGGG  253 (447)
T ss_dssp             HHHHHHHHHHHCCSEEEEECSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSGGGCCC
T ss_pred             HHHHHHHHHhcCCeEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCCCCcEEEecCCcCCCCC
Confidence            99999999766899999988999988899999999999999999999999988776666666668899999999999999


Q ss_pred             CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-----C
Q 009673          320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-----G  394 (529)
Q Consensus       320 rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-----G  394 (529)
                      +||++++++      ++.+.++...+++.+++++...++++++++......+++++.+++.++++++.+.|.+.     |
T Consensus       254 ~gG~i~~~~------~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g  327 (447)
T 3h7f_A          254 RSGLIVGKQ------QYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAG  327 (447)
T ss_dssp             SCEEEEECG------GGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTT
T ss_pred             CeEEEEECH------HHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCC
Confidence            999999988      67777777667888888888888888888887766677899999999999999999887     9


Q ss_pred             cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673          395 YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI  473 (529)
Q Consensus       395 ~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i  473 (529)
                      ++++.+++++++++++++..+++...+.+.|+++||.++.+.+|++. ++..++++|||++.++++|++++|+++++++|
T Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l  407 (447)
T 3h7f_A          328 VSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADII  407 (447)
T ss_dssp             CEEGGGSCSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHH
T ss_pred             eEEecCCCCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHH
Confidence            99887556778889999877778888999999999999987788864 56778899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCC
Q 009673          474 HEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIP  527 (529)
Q Consensus       474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~  527 (529)
                      .+++...                    ++.     ++++|+++|.+|+++||++
T Consensus       408 ~~~l~~~--------------------~~~-----~~~~~~~~v~~~~~~~~~~  436 (447)
T 3h7f_A          408 ATALATG--------------------SSV-----DVSALKDRATRLARAFPLY  436 (447)
T ss_dssp             HHHHHSG--------------------GGC-----CHHHHHHHHHHHHHHSCSS
T ss_pred             HHHHhcc--------------------Cch-----hHHHHHHHHHHHHHhCCCC
Confidence            9988632                    012     2789999999999999994

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=100.00  E-value=2.1e-48  Score=408.07  Aligned_cols=409  Identities=46%  Similarity=0.768  Sum_probs=341.2

Q ss_pred             hhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673           81 YSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA  160 (529)
Q Consensus        81 ~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~  160 (529)
                      ..+...++++++.+.+|..++.+.|+|++++|++++.|++++...+.+.|.+||++.++|.+....+++++.++++++++
T Consensus         4 ~~~~~~~~~i~~~~~~e~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~   83 (417)
T 3n0l_A            4 MSLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKL   83 (417)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHH
T ss_pred             cchhhcCHHHHHHHHHHHHHHhcCeeeecccCCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHH
Confidence            34778999999999888888888999999999999999999999998889889999999999999999999899999999


Q ss_pred             cCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCH
Q 009673          161 FNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY  240 (529)
Q Consensus       161 ~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~  240 (529)
                      +|++++    +|.+++|++|+..++.++++|||+|+++++.|.++..++.     .+...|..+.+++++++ +++.+|+
T Consensus        84 ~g~~~~----~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~-~~~~~d~  153 (417)
T 3n0l_A           84 FNCKFA----NVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGA-----KVSSSGKMYESCFYGVE-LDGRIDY  153 (417)
T ss_dssp             HTCSEE----ECCCSSHHHHHHHHHHHHSCTTCEEEEECC---------------------CCSEEEEECCC-TTSSCCH
T ss_pred             hCCCCc----ceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhh-----hhhhhcceeeeEeccCC-CCCCcCH
Confidence            999763    5777999999999999999999999999999988766553     23344555677788777 6788999


Q ss_pred             HHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCC
Q 009673          241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPR  320 (529)
Q Consensus       241 d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gpr  320 (529)
                      ++|++.+++.++++|+++.++|+...|+++|.++|++||++||+|++|+.|..+.+..+.++.++|++++|+||+|+|||
T Consensus       154 ~~l~~~i~~~~~~~v~~~~~~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~  233 (417)
T 3n0l_A          154 EKVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPR  233 (417)
T ss_dssp             HHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTTTCSEEEEESSTTTCSCS
T ss_pred             HHHHHHHHhcCCeEEEECCcccCccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccccceEEEeeCccccCCCC
Confidence            99999998558999999888888889999999999999999999999998888766655555678999999999999999


Q ss_pred             CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC
Q 009673          321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG  400 (529)
Q Consensus       321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~  400 (529)
                      ||+++++++     ++.+.+....+++..++++...+++++.++......+++++.+++.++++++.+.|.+.|+.+..+
T Consensus       234 ~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~  308 (417)
T 3n0l_A          234 GGIIMTNDE-----ELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDRKFKLVSD  308 (417)
T ss_dssp             CEEEEESCH-----HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGG
T ss_pred             eeEEEECCH-----HHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCceeccC
Confidence            999999843     677777766667777888888888888888776556778999999999999999999999998775


Q ss_pred             CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          401 GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       401 gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +...+++++++...+++...+.+.|+++||.++....|+.. +++.++++|+|++.+++++++++|++++++.|++++..
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~  388 (417)
T 3n0l_A          309 GTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDD  388 (417)
T ss_dssp             SCSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred             CCCceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence            55677888888777778888999999999999877777664 46667899999999999999999999999999998863


Q ss_pred             HHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCC
Q 009673          480 TLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG  528 (529)
Q Consensus       480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~  528 (529)
                      .                   + +.    ..+++++++|.+|+++||+|+
T Consensus       389 ~-------------------~-~~----~~~~~~~~~v~~~~~~~~~~~  413 (417)
T 3n0l_A          389 V-------------------N-NE----KLQENIKQELKKLASNFIIYE  413 (417)
T ss_dssp             T-------------------T-CH----HHHHHHHHHHHHHHTTCCCCS
T ss_pred             c-------------------c-ch----hhHHHHHHHHHHHHhcCCCcc
Confidence            2                   1 11    368899999999999999975

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=100.00  E-value=3.7e-46  Score=391.10  Aligned_cols=409  Identities=48%  Similarity=0.788  Sum_probs=318.9

Q ss_pred             cccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC
Q 009673           83 LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN  162 (529)
Q Consensus        83 l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g  162 (529)
                      +...++++++++.++..++.+.+.+++++|++++.|++++...+.+.|..|+++.++|.+..+.+.+++.+++++++++|
T Consensus        11 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~   90 (420)
T 3gbx_A           11 IADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG   90 (420)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT
T ss_pred             hhhcCHHHHHHHHHHHHhhhcceeeeccCCCCCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC
Confidence            67889999999988888888899999999999999999999998888888999988888888788888888899999999


Q ss_pred             CCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHH
Q 009673          163 LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDM  242 (529)
Q Consensus       163 ~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~  242 (529)
                      ++++    +|.+++|++|+..++.++++|||+|++.++.|++++.++.     .+...|..+..++++++ +++.+|+++
T Consensus        91 ~~~~----~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~-~~~~~d~~~  160 (420)
T 3gbx_A           91 ADYA----NVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGS-----PVNFSGKLYNIVPYGID-ESGKIDYDE  160 (420)
T ss_dssp             CSEE----ECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC-----------------CHHHHSEEEEEEEC-TTCSCCHHH
T ss_pred             CCCc----eeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccch-----hhhhcccceeEEeccCC-ccCCcCHHH
Confidence            9763    5667999999999999999999999999999988765553     22344555566777776 568899999


Q ss_pred             HHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCe
Q 009673          243 LEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG  322 (529)
Q Consensus       243 le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG  322 (529)
                      |++++++.++++|+++.|++|+..|+++|+++|++||++||+|++|+.|....+..+..+..+|++++|+||+++||+||
T Consensus       161 l~~~i~~~~~~~v~~~~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gg  240 (420)
T 3gbx_A          161 MAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGG  240 (420)
T ss_dssp             HHHHHHHHCCSEEEECCTTCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTTTSSEEEEESSGGGCSCSCE
T ss_pred             HHHHHHhcCCeEEEEecCccCCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccccCCEEEeecccCCCCCCce
Confidence            99999876799999988999998999999999999999999999998887765554555556899999999999999999


Q ss_pred             EEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC
Q 009673          323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS  402 (529)
Q Consensus       323 ~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt  402 (529)
                      ++++++..   .++.+.++...+++.++++....+++++.++......+++++.+++.++++++.+.|.+.|++++.++.
T Consensus       241 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~  317 (420)
T 3gbx_A          241 LILAKGGD---EELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRGYKVVSGGT  317 (420)
T ss_dssp             EEEESSCC---HHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSC
T ss_pred             EEEEcCCc---HHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcCCeeccCCC
Confidence            99998721   146666666667777778888888888878776655667888999999999999999999999876544


Q ss_pred             CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHH
Q 009673          403 DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITL  481 (529)
Q Consensus       403 ~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~  481 (529)
                      ..+++++++...+.+...+.+.|+++||.+.....|++. .++.+.++||+++..++++++++|++++++.|++++... 
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~-  396 (420)
T 3gbx_A          318 ENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNI-  396 (420)
T ss_dssp             SSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT-
T ss_pred             CCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhCc-
Confidence            567788887655667788999999999999876667654 456677899999989999999999999999999887632 


Q ss_pred             HHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCC
Q 009673          482 EAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG  528 (529)
Q Consensus       482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~  528 (529)
                                        . +.    ..+++++++|.+|+++||+++
T Consensus       397 ------------------~-~~----~~~~~~~~~~~~~~~~~~~~~  420 (420)
T 3gbx_A          397 ------------------N-DE----ATIERVKAKVLDICARFPVYA  420 (420)
T ss_dssp             ------------------T-CH----HHHHHHHHHHHHHHHHSCSCC
T ss_pred             ------------------c-cc----hhHHHHHHHHHHHHHhCCCCC
Confidence                              1 11    368899999999999999874

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=100.00  E-value=2e-45  Score=386.07  Aligned_cols=417  Identities=49%  Similarity=0.766  Sum_probs=319.5

Q ss_pred             hhhhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 009673           78 FVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA  157 (529)
Q Consensus        78 ~~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~l  157 (529)
                      ++.+.+...+++++..+.++..++.+.++|++++|++++.|++++...+.+.|..|+++.++|.+..+.+.+++.+++++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   87 (425)
T 3ecd_A            8 FFSQSLAERDASVRGAILKELERQQSQVELIASENIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERV   87 (425)
T ss_dssp             HHHCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHH
T ss_pred             HHHHHHHhhCHHHHHHHHHHHHHHhcceeeecccCCCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHH
Confidence            45677888999999998888777778899999999999999999999988888889999888888877777788888899


Q ss_pred             HHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCC
Q 009673          158 LAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL  237 (529)
Q Consensus       158 a~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~  237 (529)
                      ++++|.+.    ++|.+++|++|+..++.++++|||+|++.++.|.+++.++.     .....|..++.++++++++++.
T Consensus        88 ~~~~~~~~----~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~  158 (425)
T 3ecd_A           88 KRLFNAGH----ANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGA-----KPALSGKWFNALQYGVSRDTML  158 (425)
T ss_dssp             HHHHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECC-----------------------CEEEEECCCTTTSS
T ss_pred             HHHhCCCC----ceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecch-----hhhhcccceeeeecCCCcccCc
Confidence            99999886    34667899999999999999999999999999877544432     2224455557778877766789


Q ss_pred             CCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccccccc
Q 009673          238 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLR  317 (529)
Q Consensus       238 iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~  317 (529)
                      +|+++|++.+++.++++|++++++||...++++|.++|++||++||+|++|+.|....+....++..+|++++|+||+|+
T Consensus       159 ~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l~  238 (425)
T 3ecd_A          159 IDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLR  238 (425)
T ss_dssp             CCHHHHHHHHHHHCCSEEEEECSCCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGC
T ss_pred             cCHHHHHHHHhhcCCcEEEEccccCCCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCcccC
Confidence            99999999998558999999988999999999999999999999999999998877665444444468999999999999


Q ss_pred             CCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEE
Q 009673          318 GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL  397 (529)
Q Consensus       318 GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v  397 (529)
                      |||+|+++++++     ++.+.+....+++.+++++...+++++.++......+++++.+++.++++++.+.|.+.|+++
T Consensus       239 g~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~  313 (425)
T 3ecd_A          239 GPRGGFVLTNDE-----EIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGVDL  313 (425)
T ss_dssp             CCSCEEEEESCH-----HHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred             CCCcEEEEeCCH-----HHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence            999999999863     577777666667777788888888887787766556678899999999999999999999998


Q ss_pred             ecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          398 VSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       398 ~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      +.++...+++++++...+.+.+.+.+.|+++||.+.....||+. +++.++++|++++.+++++++++|++++++.|+++
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~  393 (425)
T 3ecd_A          314 VTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEV  393 (425)
T ss_dssp             GGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             ccCCCCceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHH
Confidence            86544567788887655667788999999999999866667754 45566889999988888899999999999999998


Q ss_pred             HHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCC
Q 009673          477 VEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIP  527 (529)
Q Consensus       477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~  527 (529)
                      ++....      ++         +.+.    ..+++++++|.+||+.||+.
T Consensus       394 l~~~~~------~~---------~~~~----~~~~~~~~~~~~~~~~~~~~  425 (425)
T 3ecd_A          394 FEALRT------NP---------EGDH----ATEQRVRREIFALCERFPIY  425 (425)
T ss_dssp             HHHHHH------CT---------TCCH----HHHHHHHHHHHHHHHTSCCC
T ss_pred             Hhcccc------cc---------ccCc----hhHHHHHHHHHHHHhcCCCC
Confidence            875310      10         1111    36789999999999999973

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=100.00  E-value=9.4e-41  Score=348.79  Aligned_cols=402  Identities=50%  Similarity=0.809  Sum_probs=315.2

Q ss_pred             ccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC
Q 009673           84 GEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL  163 (529)
Q Consensus        84 ~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~  163 (529)
                      ...||++++.+.++..++...|++..++|++++.|++++...+.+.+..+||+.+++.|.+..+.+|+.+++++++++|+
T Consensus         5 ~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~   84 (407)
T 2dkj_A            5 LKRDEALFELIALEEKRQREGLELIASENFVSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGA   84 (407)
T ss_dssp             -CCCHHHHHHHHHHHHHHHTSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred             cccCHHHHHHHHHHHHHhhcceeeccCCCCCCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCC
Confidence            45789999999998888888999999999999999999998886656667887776767776778888888899999999


Q ss_pred             CCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHH
Q 009673          164 DENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDML  243 (529)
Q Consensus       164 ~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~l  243 (529)
                      ++    .+|.+++|++|+..++.++++|||+|+++++.|++++....     .+...|..+..++++++++++.+|+++|
T Consensus        85 ~~----~~i~~~sGt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~d~~~l  155 (407)
T 2dkj_A           85 AW----ANVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHGS-----RVNFSGKLYKVVSYGVRPDTELIDLEEV  155 (407)
T ss_dssp             SE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTC-----TTSHHHHHSEEEEECCCTTTSSCCHHHH
T ss_pred             Cc----ceEEecchHHHHHHHHHHhcCCCCEEEEecccccCccchHH-----HHHhcCceEEEEecCCCcccCccCHHHH
Confidence            85    35667999999999999999999999999998876542111     2334455446667666655688999999


Q ss_pred             HHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCeE
Q 009673          244 EKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGM  323 (529)
Q Consensus       244 e~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG~  323 (529)
                      ++.+++.++++|+++.|+||...|+++|.++|++||+++|+|++|..|+...+....++...|++++|+||+++|+++|+
T Consensus       156 ~~~l~~~~~~~v~~~~p~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G~  235 (407)
T 2dkj_A          156 RRLALEHRPKVIVAGASAYPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRGGL  235 (407)
T ss_dssp             HHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSCEE
T ss_pred             HHHHhhcCCeEEEEeccccCCCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCCCCCceE
Confidence            99998558999999888899888999999999999999999999988776555433334457999999999999999999


Q ss_pred             EEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCC
Q 009673          324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD  403 (529)
Q Consensus       324 i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~  403 (529)
                      ++++++     ++.+.+.....++..++++...++++..+++.....++++..+++.++++++.+.|++.|++++.+...
T Consensus       236 ~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~  310 (407)
T 2dkj_A          236 ILSNDP-----ELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRGYRIVTGGTD  310 (407)
T ss_dssp             EEESCH-----HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCS
T ss_pred             EEECCH-----HHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCceeecCCCC
Confidence            999832     677777655455556777777776777778765455668889999999999999999889988753234


Q ss_pred             CceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHH
Q 009673          404 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLE  482 (529)
Q Consensus       404 ~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~  482 (529)
                      .+++++++...+.+...+.+.|.++||.+..+..|.+. ++..++++||+++.+|+.+.+++|++++++.|+++++.   
T Consensus       311 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~---  387 (407)
T 2dkj_A          311 NHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE---  387 (407)
T ss_dssp             SSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH---
T ss_pred             ceEEEEECcccCCCHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc---
Confidence            56778777543456778888899999999765433221 22346789999876555567789999999999887652   


Q ss_pred             HHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCC
Q 009673          483 AKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIP  527 (529)
Q Consensus       483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~  527 (529)
                                         ++      .+.++++|.+|..+||++
T Consensus       388 -------------------~~------~~~~~~~~~~~~~~~~~~  407 (407)
T 2dkj_A          388 -------------------GP------SEALREEVRRLALAHPMP  407 (407)
T ss_dssp             -------------------CC------CHHHHHHHHHHHHTSCCC
T ss_pred             -------------------Cc------hHHHHHHHHHHHHhcCCC
Confidence                               01      246888999999999975

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=100.00  E-value=2.7e-40  Score=345.05  Aligned_cols=401  Identities=50%  Similarity=0.822  Sum_probs=312.7

Q ss_pred             hcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc
Q 009673           82 SLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF  161 (529)
Q Consensus        82 ~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~  161 (529)
                      .+.++||+++..+..+..++.+.+.+.+++++.++.|++++...+.++|..||++.+++.|.....++++.+++++++++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~   82 (405)
T 2vi8_A            3 YLPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLF   82 (405)
T ss_dssp             SHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             chhhhCHHHHHHHHHHHHHhhcceeeccCcccCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh
Confidence            35667899999998887777777888889999999999999988876777788888878777777889888889999999


Q ss_pred             CCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHH
Q 009673          162 NLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYD  241 (529)
Q Consensus       162 g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d  241 (529)
                      |+++    .+|.+++|++|+..++.++++|||+|+++++.|+++...+.     .+...|..+++++++++++++.+|++
T Consensus        83 g~~~----~~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~d~~  153 (405)
T 2vi8_A           83 GAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGS-----PVNFSGVQYNFVAYGVDPETHVIDYD  153 (405)
T ss_dssp             TCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTC-----TTSHHHHHSEEEEECBCTTTCSBCHH
T ss_pred             CCCc----eEEEecCcHHHHHHHHHHhcCCCCEEEEecccccchhcccc-----hhhhccceeEEEecccccccCCcCHH
Confidence            9985    34667899999999999999999999999988766543221     12234443467777776556889999


Q ss_pred             HHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC
Q 009673          242 MLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG  321 (529)
Q Consensus       242 ~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg  321 (529)
                      +|++.+++.++++|+++.++++...++++|.++|++||++||+|++|..|....+....++.+.|++++|+||++.||.|
T Consensus       154 ~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~g  233 (405)
T 2vi8_A          154 DVREKARLHRPKLIVAAAAAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRG  233 (405)
T ss_dssp             HHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSC
T ss_pred             HHHHHHHhcCCeEEEEeCCCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCC
Confidence            99999986589999987677776779999999999999999999998876654443333334689999999999988889


Q ss_pred             eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCC
Q 009673          322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG  401 (529)
Q Consensus       322 G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~g  401 (529)
                      |++++++      ++.+.+.....++..++++...++++..+++.....++++..+++.++++++.+.|++.|++++.+.
T Consensus       234 G~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~  307 (405)
T 2vi8_A          234 GMILCQE------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGG  307 (405)
T ss_dssp             EEEEECH------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGS
T ss_pred             eEEEEcH------HHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeEecCC
Confidence            9999986      6777666554455667778888888777887665556688899999999999999998899887643


Q ss_pred             CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          402 SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       402 t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      ...+++++++...+.+...+.+.|.++||.+..+..|.+. ++..++++||+++.++++.++++|++++++.|++++...
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~  387 (405)
T 2vi8_A          308 TDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNV  387 (405)
T ss_dssp             CSSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCT
T ss_pred             CCceEEEEEccCCCCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhcc
Confidence            3456778877644556778888899999999765433222 233457899998876666788999999999998876421


Q ss_pred             HHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHH
Q 009673          481 LEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALT  521 (529)
Q Consensus       481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  521 (529)
                                         .+ +    .+++.+|++|.+|+
T Consensus       388 -------------------~~-~----~~~~~~~~~~~~~~  404 (405)
T 2vi8_A          388 -------------------GS-E----QALEEARQRVAALT  404 (405)
T ss_dssp             -------------------TC-H----HHHHHHHHHHHHHH
T ss_pred             -------------------cc-c----ccHHHHHHHHHHhh
Confidence                               11 1    24778999999886

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=99.96  E-value=5.8e-28  Score=249.26  Aligned_cols=332  Identities=16%  Similarity=0.102  Sum_probs=235.0

Q ss_pred             eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 009673          105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV  184 (529)
Q Consensus       105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~  184 (529)
                      +.+.++..++++.|++++...+.+.+           + ....++...+++++++++|++.+. ...+..++|++|+. +
T Consensus         4 ~~~~~gp~~~~~~v~~a~~~~~~~~~-----------~-~~~~~~~~~~~~~la~~~~~~~~~-~~v~~~~g~t~al~-~   69 (384)
T 3zrp_A            4 LLLHVGPTTIKEDVLVAGLENNVGFT-----------S-KEFVEALAYSLKGLRYVMGASKNY-QPLIIPGGGTSAME-S   69 (384)
T ss_dssp             --CCSSCSCCCHHHHHHTTCCSCCTT-----------S-HHHHHHHHHHHHHHHHHHTCCTTS-EEEEEESCHHHHHH-H
T ss_pred             eeccCCCCCCCHHHHHHhhccccccc-----------c-HHHHHHHHHHHHHHHHHhCCCCCC-cEEEEcCCcHHHHH-H
Confidence            45677788899999999987653221           1 112334445668999999998621 01233455569999 9


Q ss_pred             HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC
Q 009673          185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR  264 (529)
Q Consensus       185 l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~  264 (529)
                      +.++++|||+|+++++.|.+.   .+.   ..+...|.  +++.++++ +++.+|+++|++.+++.++++|++++++||+
T Consensus        70 ~~~~~~~gd~vi~~~~~~~~~---~~~---~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~npt  140 (384)
T 3zrp_A           70 VTSLLKPNDKILVVSNGVFGD---RWE---QIFKRYPV--NVKVLRPS-PGDYVKPGEVEEEVRKSEYKLVALTHVETST  140 (384)
T ss_dssp             GGGGCCTTCEEEEECSSHHHH---HHH---HHHTTSSC--EEEEECCS-TTCCCCHHHHHHHHHHSCEEEEEEESEETTT
T ss_pred             HHhhcCCCCEEEEecCCcchH---HHH---HHHHHcCC--cEEEecCC-CCCCCCHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence            999999999999998765331   110   11233454  66777776 3678999999999988679999998887776


Q ss_pred             --CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh-
Q 009673          265 --DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI-  340 (529)
Q Consensus       265 --~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i-  340 (529)
                        ..|+++|.++|++||+++|+|++|..|....+...   .++|++++|+||++.|+.| |++++++      ++.+++ 
T Consensus       141 G~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~d~~~~s~~K~~~~~~g~g~~~~~~------~~~~~~~  211 (384)
T 3zrp_A          141 GVREPVKDVINKIRKYVELIVVDGVSSVGAEEVKAEE---WNVDVYLTASQKALGSAAGLGLLLLSP------KALSILD  211 (384)
T ss_dssp             TEECCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTT---TTCSEEEEETTSTTCCCSSEEEEEECH------HHHHHHH
T ss_pred             ceECcHHHHHHHHHhcCCEEEEECcccccCccccccc---cCCCEEEecCcccccCCCceEEEEECH------HHHHHhc
Confidence              78999999999999999999999886654322111   1579999999999977666 9999987      554444 


Q ss_pred             cc------------cc---------cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec
Q 009673          341 NN------------AV---------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS  399 (529)
Q Consensus       341 ~~------------~~---------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~  399 (529)
                      ..            ..         .....|+++...++++..+++.....++++..+++.++++++.+.|++.|+++..
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~  291 (384)
T 3zrp_A          212 SQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEALGLEIVA  291 (384)
T ss_dssp             HCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSC
T ss_pred             CCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCeEcc
Confidence            10            00         1111257777788888778876654456888899999999999999988888765


Q ss_pred             CC---CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          400 GG---SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       400 ~g---t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      +.   ...+++++.+..  .+..++.+.|.+.||.+..+    ...+.  +.+||++...    .+++|++++++.|+++
T Consensus       292 ~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g----~~~~~--~~iRi~~~~~----~~~e~i~~~~~~l~~~  359 (384)
T 3zrp_A          292 RRPESYSNTVTGVILKV--ADPQKVLAGTVNEGVEFAPG----VHPAF--KYFRIGHMGW----VTPNDAIIAISVIERT  359 (384)
T ss_dssp             SSGGGBCSSEEEEECSS--SCHHHHHHHHHTTTCCCEEC----CCTTC--CEEEEECCSS----CCHHHHHHHHHHHHHH
T ss_pred             CcccccCccEEEEECCC--CCHHHHHHHHHHCCEEEecC----CCCCc--CEEEEecccc----CCHHHHHHHHHHHHHH
Confidence            42   123455566543  56788888888889998643    21111  7899997654    3589999999999998


Q ss_pred             HHHH
Q 009673          477 VEIT  480 (529)
Q Consensus       477 ~~~~  480 (529)
                      +...
T Consensus       360 l~~~  363 (384)
T 3zrp_A          360 LRKL  363 (384)
T ss_dssp             HHHH
T ss_pred             HHHc
Confidence            8743

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=99.96  E-value=1.7e-27  Score=248.50  Aligned_cols=335  Identities=15%  Similarity=0.122  Sum_probs=238.1

Q ss_pred             ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673          104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE  183 (529)
Q Consensus       104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~  183 (529)
                      .+.+.+++..+++.|++++...+...+           ...+. .+...+++++++++|.+.++.  .+...+|++|+..
T Consensus        14 ~~~~~pgp~~~~~~v~~a~~~~~~~~~-----------~~~~~-~~~~~~~~~la~~~~~~~~~~--v~~~~sgt~al~~   79 (411)
T 3nnk_A           14 RLLMGPGPINADPRVLRAMSSQLIGQY-----------DPAMT-HYMNEVMALYRGVFRTENRWT--MLVDGTSRAGIEA   79 (411)
T ss_dssp             CEEESSSCCCCCHHHHHHHTSCCCCTT-----------CHHHH-HHHHHHHHHHHHHHTCCCSEE--EEEESCHHHHHHH
T ss_pred             ceeecCCCCCCCHHHHHHhhccccccc-----------cHHHH-HHHHHHHHHHHHHhCCCCCcE--EEECCCcHHHHHH
Confidence            366777778899999999986542211           11222 333455689999999986531  2344567899999


Q ss_pred             HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 009673          184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP  263 (529)
Q Consensus       184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p  263 (529)
                      ++.++++|||+|++.++.|.+..   +   ...+...|.  +++.++++ +++.+|+|+|++.+++.++++|++++++||
T Consensus        80 ~~~~~~~~gd~Vl~~~~~~~~~~---~---~~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~np  150 (411)
T 3nnk_A           80 ILVSAIRPGDKVLVPVFGRFGHL---L---CEIARRCRA--EVHTIEVP-WGEVFTPDQVEDAVKRIRPRLLLTVQGDTS  150 (411)
T ss_dssp             HHHHHCCTTCEEEEEECSHHHHH---H---HHHHHHTTC--EEEEEECC-TTCCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred             HHHHhcCCCCEEEEecCCchHHH---H---HHHHHHcCC--eEEEEecC-CCCCCCHHHHHHHHhhCCCeEEEEeCCCCC
Confidence            99999999999999998664321   1   112234454  66666665 467899999999998668999999987777


Q ss_pred             C--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh
Q 009673          264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI  340 (529)
Q Consensus       264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i  340 (529)
                      +  ..|+++|.++|++||+++|+|++|..|....+...   .++|++++|+||++.|+.| |++++++      ++.+++
T Consensus       151 tG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~---~~~d~~~~s~~K~l~~~~g~g~~~~~~------~~~~~~  221 (411)
T 3nnk_A          151 TTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDV---WGLDAVSAGMQKCLGGPSGTSPITLSA------RMEEAI  221 (411)
T ss_dssp             TTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTT---TTCSEEECCSTTTTCCCSSEEEEEECH------HHHHHH
T ss_pred             cceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhc---cCCcEEEecCccccCCCCceEEEEECH------HHHHHH
Confidence            6  77899999999999999999999877654322111   1589999999999877777 9999987      565554


Q ss_pred             cccc-----------------------------------cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Q 009673          341 NNAV-----------------------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA  385 (529)
Q Consensus       341 ~~~~-----------------------------------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~  385 (529)
                      ....                                   .....++++...++++..+++.....++++..+++.+++++
T Consensus       222 ~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~  301 (411)
T 3nnk_A          222 RRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDA  301 (411)
T ss_dssp             HTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             hhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            4321                                   01123567777888887788766544467888999999999


Q ss_pred             HHHHHHhcCcEEecCCC--CCceEEEccCCCCCcHHHHHHhHhc-CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCC
Q 009673          386 LASRLVELGYKLVSGGS--DNHLVLVDLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS  462 (529)
Q Consensus       386 l~~~L~~~G~~v~~~gt--~~~~~~v~~~~~~i~~~~~~~~L~~-~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~  462 (529)
                      +.+.|++.|+++..+..  ..++.++.+. .+.+..++.+.|.+ +||.+..+..     +...+.|||++...+   .+
T Consensus       302 l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~gi~v~~g~~-----~~~~~~iRi~~~~~~---~~  372 (411)
T 3nnk_A          302 LVKGIQAMGLETFGDLKHKMNNVLGVVIP-QGINGDQARKLMLEDFGIEIGTSFG-----PLHGKVWRIGTMGYN---AR  372 (411)
T ss_dssp             HHHHHHHTTCCBCSCGGGBCSSEEEEECC-TTCCHHHHHHHHHHHHSEEEEECCG-----GGTTTEEEEECCGGG---CS
T ss_pred             HHHHHHHcCCEeCCCcccccccEEEEECC-CCCCHHHHHHHHHHhcCeEEeCccC-----CCCCCEEEEeCccCc---CC
Confidence            99999998888765321  2344555553 35677777777654 5999965421     223578999962222   24


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 009673          463 EKEFVAIADFIHEGVEI  479 (529)
Q Consensus       463 ~~d~~~la~~i~~~~~~  479 (529)
                      ++|++++++.|+++++.
T Consensus       373 ~~~i~~~~~~l~~~l~~  389 (411)
T 3nnk_A          373 KDCVMTTLSALEAVLNY  389 (411)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            89999999999998864

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=99.96  E-value=1.7e-27  Score=248.86  Aligned_cols=335  Identities=13%  Similarity=0.099  Sum_probs=237.5

Q ss_pred             ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673          104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE  183 (529)
Q Consensus       104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~  183 (529)
                      .+.+.++...+++++++++.......|          .  ....++...+++++++++|++.+.  +.+...+|++|+..
T Consensus        12 ~~~~~p~p~~~~~~v~~a~~~~~~~~~----------~--~~~~~~~~~l~~~la~~~g~~~~~--~~~~~~s~t~al~~   77 (416)
T 3isl_A           12 RTIMTPGPVEVDPRVLRVMSTPVVGQF----------D--PAFTGIMNETMEMLRELFQTKNRW--AYPIDGTSRAGIEA   77 (416)
T ss_dssp             CEECSSSSCCCCHHHHHHTTSCCCCTT----------S--HHHHHHHHHHHHHHHHHTTCCCSE--EEEEESCHHHHHHH
T ss_pred             ceeecCCCcCcCHHHHHHhcccCCCCc----------c--HHHHHHHHHHHHHHHHHhCCCCCc--EEEecCcHHHHHHH
Confidence            456777777789999999875321111          1  112344445668999999998752  22245677799999


Q ss_pred             HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 009673          184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP  263 (529)
Q Consensus       184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p  263 (529)
                      ++.++++|||+|+++++.|.++.   +   ...+...|.  +++.++++ +++.+|+++|++++++.++++|++++++||
T Consensus        78 ~~~~l~~~gd~Vl~~~~~~~~~~---~---~~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~np  148 (416)
T 3isl_A           78 VLASVIEPEDDVLIPIYGRFGYL---L---TEIAERYGA--NVHMLECE-WGTVFDPEDIIREIKKVKPKIVAMVHGETS  148 (416)
T ss_dssp             HHHHHCCTTCEEEEEESSHHHHH---H---HHHHHHTTC--EEEEEECC-TTCCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred             HHHHhcCCCCEEEEecCCcccHH---H---HHHHHhcCC--eeEEEecC-CCCCCCHHHHHHHHhhCCCcEEEEEccCCC
Confidence            99999999999999998654311   1   112334454  66666666 457899999999998558999999988877


Q ss_pred             C--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh
Q 009673          264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI  340 (529)
Q Consensus       264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i  340 (529)
                      +  ..|+++|.++|++||+++|+|++|..|....+...   .++|++++|+||++.|+.| |++++++      ++.+.+
T Consensus       149 tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~d~~~~s~~K~l~g~~g~g~~~~~~------~~~~~~  219 (416)
T 3isl_A          149 TGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDE---WKIDAAIGGTQKCLSVPSGMAPITYNE------RVADVI  219 (416)
T ss_dssp             TTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTT---TTCSEEECCSSSTTCCCSSEEEEEECH------HHHHHH
T ss_pred             CceecCHHHHHHHHHHcCCEEEEECCccccCCCcchhh---cCCCEEEecCccccCCCCCeEEEEECH------HHHHHh
Confidence            6  77899999999999999999999887654322111   1589999999999878777 9999887      555544


Q ss_pred             ccc-------------------------------------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673          341 NNA-------------------------------------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC  383 (529)
Q Consensus       341 ~~~-------------------------------------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a  383 (529)
                      ...                                     ......++++...++++..+++.....++++..+++.+++
T Consensus       220 ~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~  299 (416)
T 3isl_A          220 AARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHE  299 (416)
T ss_dssp             HTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             hccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            321                                     1111245677778888877887665444788899999999


Q ss_pred             HHHHHHHHhcCcEEecCCC--CCceEEEccCCCCCcHHHHHHhHhc-CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCC
Q 009673          384 RALASRLVELGYKLVSGGS--DNHLVLVDLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG  460 (529)
Q Consensus       384 ~~l~~~L~~~G~~v~~~gt--~~~~~~v~~~~~~i~~~~~~~~L~~-~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g  460 (529)
                      +++.+.|.+.|+++..+..  ..+++++.+. .+.+..++.+.|.+ +||.+..+.     .+..++.+||+++...+  
T Consensus       300 ~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~~gi~v~~g~-----~~~~~~~iRi~~~~~~~--  371 (416)
T 3isl_A          300 AALAAGIKAMGLRLFGDDSCKMPVVTCVEIP-GGIDGESVRDMLLAQFGIEIASSF-----GPLAGKIWRIGTMGYSC--  371 (416)
T ss_dssp             HHHHHHHHHTTCCBCSCGGGBCTTEEEEECC-TTCCHHHHHHHHHHHHCEECBCCC-----STTTTTEEEEECCGGGC--
T ss_pred             HHHHHHHHHcCCEeccCccccCCcEEEEeCC-CCCCHHHHHHHHHHhCCEEEecCC-----CCCCCCEEEEecccCCC--
Confidence            9999999998888775421  1244555553 35577788777755 599996432     12346789999855443  


Q ss_pred             CCHHHHHHHHHHHHHHHHH
Q 009673          461 FSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       461 ~~~~d~~~la~~i~~~~~~  479 (529)
                       .+++++++++.|++++..
T Consensus       372 -~~e~i~~~~~~l~~~~~~  389 (416)
T 3isl_A          372 -RKENVLFVLAGLEAVLLR  389 (416)
T ss_dssp             -SHHHHHHHHHHHHHHHHH
T ss_pred             -cHHHHHHHHHHHHHHHHH
Confidence             244499999999998864

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.96  E-value=8.9e-28  Score=245.10  Aligned_cols=324  Identities=13%  Similarity=0.038  Sum_probs=231.0

Q ss_pred             eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 009673          105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV  184 (529)
Q Consensus       105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~  184 (529)
                      +.+.++..++++.|++++...+...        +++   .. .......++++++++|+++++   .+...+|++|+..+
T Consensus         3 ~l~~~~p~~~~~~v~~a~~~~~~~~--------~~~---~~-~~~~~~l~~~la~~~g~~~~~---i~~~~g~t~a~~~~   67 (352)
T 1iug_A            3 WLLTPGPVRLHPKALEALARPQLHH--------RTE---AA-REVFLKARGLLREAFRTEGEV---LILTGSGTLAMEAL   67 (352)
T ss_dssp             EECSSSSCCCCHHHHHHHHSCCCCT--------TSH---HH-HHHHHHHHHHHHHHHTCSSEE---EEEESCHHHHHHHH
T ss_pred             ccccCCCCCCCHHHHHHhccCCCCc--------cCH---HH-HHHHHHHHHHHHHHhCCCCce---EEEcCchHHHHHHH
Confidence            5677888889999999998766321        111   11 222234568899999997532   23344566999999


Q ss_pred             HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC
Q 009673          185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR  264 (529)
Q Consensus       185 l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~  264 (529)
                      +.++++|||+|+++++.|.++. ..     ..+...|.  +++.++++ +++.+|+++|++   + ++++|++++++||+
T Consensus        68 ~~~~~~~gd~vl~~~~~~~~~~-~~-----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~---~-~~~~v~~~~~~npt  134 (352)
T 1iug_A           68 VKNLFAPGERVLVPVYGKFSER-FY-----EIALEAGL--VVERLDYP-YGDTPRPEDVAK---E-GYAGLLLVHSETST  134 (352)
T ss_dssp             HHHHCCTTCEEEEEECSHHHHH-HH-----HHHHHTTC--EEEEEECC-TTCCCCTTTSCC---S-SCSEEEEESEETTT
T ss_pred             HHhccCCCCeEEEEeCCchhHH-HH-----HHHHHcCC--ceEEEeCC-CCCCCCHHHHhc---c-CCcEEEEEEecCCc
Confidence            9999999999999998765532 00     01122354  66666665 356789988876   3 79999999888876


Q ss_pred             --CCCHHHHHHHHHHh--CCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCcchhHHH
Q 009673          265 --DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE  337 (529)
Q Consensus       265 --~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~  337 (529)
                        ..|+++|.++|+++  |+++|+|++|..|....+     +.  ++|++++|+||++.||.| |++++++      ++.
T Consensus       135 G~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~-----~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~------~~~  203 (352)
T 1iug_A          135 GALADLPALARAFKEKNPEGLVGADMVTSLLVGEVA-----LEAMGVDAAASGSQKGLMCPPGLGFVALSP------RAL  203 (352)
T ss_dssp             TEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCC-----SGGGTCSEEEEESSSTTCCCSCEEEEEECH------HHH
T ss_pred             ceecCHHHHHHHHHhhCCCCEEEEECCccccCccee-----ccccCeeEEEecCcccccCCCceeEEEECH------HHH
Confidence              78999999999999  999999999876643221     22  479999999999888877 9999987      443


Q ss_pred             hhh---------c----ccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCC
Q 009673          338 SAI---------N----NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN  404 (529)
Q Consensus       338 ~~i---------~----~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~  404 (529)
                      +++         .    ........++++...++++..+++.... .+++..+++.++++++.+.|++.|+++..+....
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~  282 (352)
T 1iug_A          204 ERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLP-RLEEHLALKAWQNALLYGVGEEGGLRPVPKRFSP  282 (352)
T ss_dssp             HTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGG-GHHHHHHHHHHHHHHHHHHHHHTTCEESCSSBCT
T ss_pred             HHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCcccccccCC
Confidence            331         1    0001122456677777777778876543 3778889999999999999988888876542134


Q ss_pred             ceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          405 HLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       405 ~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +++++.+. .+.+..++.+.|.+.||.+..+.     .+..++++||++...+    +++|++++++.|+++++
T Consensus       283 ~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~~~-----~~~~~~~iRi~~~~~~----~~~~i~~~~~~l~~~~~  346 (352)
T 1iug_A          283 AVAAFYLP-EGVPYARVKEAFAQRGAVIAGGQ-----GPLKGKVFRLSLMGAY----DRYEALGVAGMFREVLE  346 (352)
T ss_dssp             TCEEEECC-TTCCHHHHHHHHHTTTEECEECC-----GGGTTTEEEECCCSSC----CHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEcC-CCCCHHHHHHHHHHCCEEEEeCC-----CccCCCEEEEEccccC----CHHHHHHHHHHHHHHHH
Confidence            56677664 25577788888888899986533     1223578999987543    48999999999998875

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=99.96  E-value=2.6e-27  Score=245.68  Aligned_cols=334  Identities=12%  Similarity=0.095  Sum_probs=236.1

Q ss_pred             ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceee-ecCChHHHHH
Q 009673          104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNV-QPLSGSPANF  182 (529)
Q Consensus       104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V-~~~sGs~A~~  182 (529)
                      .+.+.+++..+++.|++++...+...|            ....+.....+++++++++|++++.   +| ..++|++|+.
T Consensus        20 ~~~~~~g~~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~l~~~la~~~g~~~~~---~i~~~~g~t~a~~   84 (393)
T 2huf_A           20 KLLMGPGPSNAPQRVLDAMSRPILGHL------------HPETLKIMDDIKEGVRYLFQTNNIA---TFCLSASGHGGME   84 (393)
T ss_dssp             CEECSSSCCCCCHHHHHHTTSCCCCTT------------SHHHHHHHHHHHHHHHHHHTCCCSE---EEEESSCHHHHHH
T ss_pred             eEEecCCCCCCCHHHHHHHHhhhccCC------------CHHHHHHHHHHHHHHHHHhCCCCCc---EEEEcCcHHHHHH
Confidence            466667777789999999987654322            1122334445668999999997641   34 3455669999


Q ss_pred             HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673          183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY  262 (529)
Q Consensus       183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~  262 (529)
                      .++.++++|||+|+++++.|.++.   +   ...+...|.  +++.++++ +++.+|+++|++.+++.++++|++++++|
T Consensus        85 ~~~~~~~~~gd~vl~~~~~~~~~~---~---~~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~n  155 (393)
T 2huf_A           85 ATLCNLLEDGDVILIGHTGHWGDR---S---ADMATRYGA--DVRVVKSK-VGQSLSLDEIRDALLIHKPSVLFLTQGDS  155 (393)
T ss_dssp             HHHHHHCCTTCEEEEEESSHHHHH---H---HHHHHHTTC--EEEEEECC-TTCCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred             HHHHHHhCCCCEEEEECCCcchHH---H---HHHHHHcCC--eeEEEeCC-CCCCCCHHHHHHHHhccCCcEEEEEccCC
Confidence            999999999999999998765421   1   001122354  66666666 35789999999999765799999988887


Q ss_pred             CC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhh
Q 009673          263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA  339 (529)
Q Consensus       263 p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~  339 (529)
                      |+  ..|+++|.++|+++|+++|+|++|..|....+...   .++|++++|+||++.|+.| |++++++      ++.+.
T Consensus       156 ptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~---~~~d~~~~s~sK~l~g~~G~G~~~~~~------~~~~~  226 (393)
T 2huf_A          156 STGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDR---WEIDAMYTGSQKVLGAPPGITPVSFSH------RAVER  226 (393)
T ss_dssp             TTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTT---TTCSEEECCSSSTTCCCSSCEEEEECH------HHHHH
T ss_pred             CccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhh---cCccEEEECCCcccccCCCeEEEEECH------HHHHH
Confidence            76  67899999999999999999999876644222110   1579999999999888777 9999987      66665


Q ss_pred             hccc---ccC-------------------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEE
Q 009673          340 INNA---VFP-------------------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL  397 (529)
Q Consensus       340 i~~~---~~p-------------------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v  397 (529)
                      +...   ..+                   ...++++...++++..+++.....++++..+++.++++++.+.|.+.|+.+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~  306 (393)
T 2huf_A          227 YKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAGFEL  306 (393)
T ss_dssp             HHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCB
T ss_pred             HhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCee
Confidence            5432   001                   123567777888777788765433467888899999999999999888877


Q ss_pred             ecCC--CCCceEEEccCCCCCcHHHHHHhHh-cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673          398 VSGG--SDNHLVLVDLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH  474 (529)
Q Consensus       398 ~~~g--t~~~~~~v~~~~~~i~~~~~~~~L~-~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~  474 (529)
                      ..+.  ..++++++.+. .+.+..++.+.|. ++||.+..+..+     ..++++||++...+   .+++|++++++.|+
T Consensus       307 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~~~~gi~v~~g~~~-----~~~~~~Ri~~~~~~---~~~e~i~~~~~~l~  377 (393)
T 2huf_A          307 YADPKDRLSTVTTIKVP-QGVDWLKAAQYAMKTYLVEISGGLGP-----TAGQVFRIGLMGQN---ATTERVDRVLQVFQ  377 (393)
T ss_dssp             SSCGGGBCTTEEEEECC-TTCCHHHHHHHHHHHHCEECBCCCGG-----GTTTEEEEECCGGG---CSHHHHHHHHHHHH
T ss_pred             ccCccccCCcEEEEEcC-CCCCHHHHHHHHHHhCCEEEecCccc-----ccCCEEEEEcccCc---CCHHHHHHHHHHHH
Confidence            6542  12335556653 3556777777775 469998543211     23578999974432   24789999999999


Q ss_pred             HHHHH
Q 009673          475 EGVEI  479 (529)
Q Consensus       475 ~~~~~  479 (529)
                      ++++.
T Consensus       378 ~~~~~  382 (393)
T 2huf_A          378 EAVAA  382 (393)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=99.96  E-value=4.9e-27  Score=242.66  Aligned_cols=327  Identities=14%  Similarity=0.141  Sum_probs=233.1

Q ss_pred             ecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHHHH
Q 009673          108 IASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYT  186 (529)
Q Consensus       108 ~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs~A~~~~l~  186 (529)
                      .++...+++.|++++...+.+.|          + .. ...+.+.+++++++++|++ .+   ..+...+|++|+..++.
T Consensus        25 ~~~~~~~~~~v~~a~~~~~~~~~----------~-~~-~~~~~~~~~~~la~~~g~~~~~---~v~~~~g~t~a~~~~~~   89 (386)
T 2dr1_A           25 TAGPVACFPEVLEIMKVQMFSHR----------S-KE-YRKVHMDTVERLREFLEVEKGE---VLLVPSSGTGIMEASIR   89 (386)
T ss_dssp             CSSSCCCCHHHHHHTTSCCCCTT----------S-HH-HHHHHHHHHHHHHHHHTCSSSE---EEEESSCHHHHHHHHHH
T ss_pred             cCCCcCCcHHHHHHHhccccccc----------C-HH-HHHHHHHHHHHHHHHhCCCCCc---EEEEeCChHHHHHHHHH
Confidence            45566789999999986654322          1 11 2445556678999999997 32   12334556699999999


Q ss_pred             hhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh-cCCcEEEEcCCCCCC-
Q 009673          187 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-FRPKLIIAGASAYPR-  264 (529)
Q Consensus       187 all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~-~~pklIi~~~s~~p~-  264 (529)
                      ++++|||+|+++++.|.++.   +   ...+...|.  +++.++++ .++.+|+++|++.+++ .++++|++++++||+ 
T Consensus        90 ~l~~~gd~vl~~~~~~~~~~---~---~~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG  160 (386)
T 2dr1_A           90 NGVSKGGKVLVTIIGAFGKR---Y---KEVVESNGR--KAVVLEYE-PGKAVKPEDLDDALRKNPDVEAVTITYNETSTG  160 (386)
T ss_dssp             HHSCTTCEEEEEESSHHHHH---H---HHHHHHTTC--EEEEEECC-TTCCCCHHHHHHHHHHCTTCCEEEEESEETTTT
T ss_pred             HhhcCCCeEEEEcCCchhHH---H---HHHHHHhCC--ceEEEecC-CCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcc
Confidence            99999999999998765420   1   112234454  66677776 3578999999999953 378999998777775 


Q ss_pred             -CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh
Q 009673          265 -DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI  340 (529)
Q Consensus       265 -~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i  340 (529)
                       ..|+++|.++|++||+++|+|++|..|....     ++.  ++|++++|+||++.+|.| |++++++      ++.+.+
T Consensus       161 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~-----~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~------~~~~~~  229 (386)
T 2dr1_A          161 VLNPLPELAKVAKEHDKLVFVDAVSAMGGADI-----KFDKWGLDVVFSSSQKAFGVPPGLAIGAFSE------RFLEIA  229 (386)
T ss_dssp             EECCHHHHHHHHHHTTCEEEEECTTTBTTBCC-----CTTTTTCSEEEEETTSTTCCCSSCEEEEECH------HHHHHH
T ss_pred             hhCCHHHHHHHHHHcCCeEEEEccccccCccc-----cccccCCcEEEEeccccccCCCceEEEEECH------HHHHHH
Confidence             7899999999999999999999988764321     122  579999999999987755 9999987      555544


Q ss_pred             cc---------------cc--cCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcCcEEecCC-
Q 009673          341 NN---------------AV--FPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELGYKLVSGG-  401 (529)
Q Consensus       341 ~~---------------~~--~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~g-  401 (529)
                      ..               ..  .....++++...++++..+++..... ++++..+++.++++.+.+.|++.|+++..+. 
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~  309 (386)
T 2dr1_A          230 EKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREIGLDILAEPG  309 (386)
T ss_dssp             TTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCTT
T ss_pred             hcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeeCcCcc
Confidence            21               00  01223456666777777778765433 4678889999999999999998888876541 


Q ss_pred             -CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          402 -SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       402 -t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                       ...+++++.+. .+.+..++.+.|.+.||.+..+..+     ..++.+||++...    .+++|++++++.|+++++.
T Consensus       310 ~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~~~~~-----~~~~~iRi~~~~~----~~~~~i~~~~~~l~~~~~~  378 (386)
T 2dr1_A          310 HESPTITAVLTP-PGIKGDEVYEAMRKRGFELAKGYGS-----VKEKTFRIGHMGY----MKFEDIQEMLDNLREVINE  378 (386)
T ss_dssp             CBCSSEEEEECC-TTCCHHHHHHHHHHTTEECEECCGG-----GTTTEEEEECCSS----CCHHHHHHHHHHHHHHHHH
T ss_pred             ccCCceEEEEcC-CCCCHHHHHHHHHHCCeEEecCccc-----cCCCEEEEECCCC----CCHHHHHHHHHHHHHHHHH
Confidence             12455666664 3456777888887779998653311     2357899998653    3589999999999998764

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=99.96  E-value=2e-27  Score=245.11  Aligned_cols=331  Identities=13%  Similarity=0.102  Sum_probs=229.8

Q ss_pred             cceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673          103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF  182 (529)
Q Consensus       103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~  182 (529)
                      ...++.+++..+|++|++++...+...+           +..+ .++.+.+++++++++|++.+.- +.+.+.+|++|+.
T Consensus        19 ~~~~~~pgp~~~~~~v~~a~~~~~~~~~-----------~~~~-~~~~~~~~~~la~~~g~~~~~~-~i~~~~ggt~al~   85 (376)
T 3f0h_A           19 GMLNFTVGPVMSSEEVRAIGAEQVPYFR-----------TTEF-SSTMLENEKFMLEYAKAPEGSK-AVFMTCSSTGSME   85 (376)
T ss_dssp             SCEECSSSSCCCCHHHHHHHTSCCCCCS-----------SHHH-HHHHHHHHHHHHHHHTCCTTCE-EEEESSCHHHHHH
T ss_pred             CceeecCCCCCCcHHHHHHhcCCCCCCC-----------CHHH-HHHHHHHHHHHHHHhCCCCCce-EEEEcCChhHHHH
Confidence            5678888888899999999986543211           1122 2333455689999999975311 2222456679999


Q ss_pred             HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673          183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY  262 (529)
Q Consensus       183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~  262 (529)
                      .++.++++|||+|+++++.+.++.   +.   ......|.  +++.++++ +++.+|++++++.+++ ++++|++++++|
T Consensus        86 ~~~~~~~~~gd~vi~~~~~~~~~~---~~---~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~~~-~~~~v~~~~~~n  155 (376)
T 3f0h_A           86 AVVMNCFTKKDKVLVIDGGSFGHR---FV---QLCEIHEI--PYVALKLE-HGKKLTKEKLYEYDNQ-NFTGLLVNVDET  155 (376)
T ss_dssp             HHHHHHCCTTCCEEEEESSHHHHH---HH---HHHHHTTC--CEEEEECC-TTCCCCHHHHHTTTTS-CCCEEEEESEET
T ss_pred             HHHHhccCCCCeEEEEeCChhhHH---HH---HHHHHcCC--ceEEEeCC-CCCCCCHHHHHHhhcc-CceEEEEecccC
Confidence            999999999999999987543321   10   01223344  45555555 4578999999998876 899999987777


Q ss_pred             CC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCcchhHHH
Q 009673          263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE  337 (529)
Q Consensus       263 p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~  337 (529)
                      |+  ..|+++|+++|++||+++|+|++|..+....     .+.  ++|++++|+||++.|+.| |++++++      ++.
T Consensus       156 ptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~-----~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~------~~~  224 (376)
T 3f0h_A          156 STAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPF-----NMNECGADVMITGSQKVLACPPGISVIVLAP------RGV  224 (376)
T ss_dssp             TTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCC-----CHHHHTCSEEEEETTTTTCCCSSCEEEEECH------HHH
T ss_pred             CcceecCHHHHHHHHHHcCCEEEEEcCccccCccc-----cccccCccEEEecCcccccCCCceEEEEECH------HHH
Confidence            76  7889999999999999999999987654321     121  479999999999986666 8988887      566


Q ss_pred             hhhcccccC----------------CCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcCcEEecC
Q 009673          338 SAINNAVFP----------------GLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELGYKLVSG  400 (529)
Q Consensus       338 ~~i~~~~~p----------------~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~  400 (529)
                      +++.....+                +...+++...++++..+++.+... ++++..++..++++++.+.|.+.|+.+..+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~  304 (376)
T 3f0h_A          225 ERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLPFELVSE  304 (376)
T ss_dssp             HHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSSEEECCS
T ss_pred             HHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCccCcc
Confidence            555432111                123355565666777777765544 467888888899999999998888877654


Q ss_pred             CCCCceEEEccCCCCCcHHHHHHhHhcC-CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          401 GSDNHLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       401 gt~~~~~~v~~~~~~i~~~~~~~~L~~~-GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .....+..+.  +.+.+..++.+.|.+. ||.+..+.     ++..++.+||+++..    .+++|++++++.|+++++
T Consensus       305 ~~~~~~~~~~--~~~~~~~~l~~~l~~~~gi~v~~g~-----~~~~~~~lRis~~~~----~t~e~i~~~~~~l~~~l~  372 (376)
T 3f0h_A          305 SPANGVTSVH--PTTANAYDIFLKLKDEYGIWICPNG-----GEMKDTIFRVGHIGA----LTHEDNTTLVNAFKDLQK  372 (376)
T ss_dssp             SBBTTEEEEE--ESSSCHHHHHHHHHHHSSEECEECC-----GGGTTTCEEEECCSS----CCHHHHHHHHHHHHHHHH
T ss_pred             ccCceEEEEe--CCCCCHHHHHHHHHHhCCEEEecCc-----cccCCCEEEEecCCC----CCHHHHHHHHHHHHHHHH
Confidence            2222333332  3455777887777665 99986431     112357899998654    358999999999998875

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=99.96  E-value=1.8e-27  Score=247.29  Aligned_cols=335  Identities=20%  Similarity=0.218  Sum_probs=237.0

Q ss_pred             cceeEecCCC---CCcHHHHHHHhhhhhccCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673          103 KSLELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS  178 (529)
Q Consensus       103 ~~i~L~asen---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g-~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs  178 (529)
                      ..|++..+..   ..++.+.+++...+.. |..++++.++..| .+...+++    +++++++|.+.     .|.+++|+
T Consensus        44 ~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~l~----~~la~~~~~~~-----~i~~~sGt  113 (399)
T 3tqx_A           44 EVLNFCANNYLGLADHPALIKTAQTVVEQ-YGFGMASVRFICGTQTIHKELE----KDISEFLGTDD-----TILYSSCF  113 (399)
T ss_dssp             EEEECSSCCTTSCTTCHHHHHHHHHHHHH-HCSCCCSCCCCCCCBHHHHHHH----HHHHHHHTCSE-----EEEESCHH
T ss_pred             eEEEeeccCcccccCCHHHHHHHHHHHHH-hCCCCCCcCccccCchHHHHHH----HHHHHHHCCCc-----EEEECchH
Confidence            3466666532   2369999999887754 5555566665444 33344444    78888999863     46679999


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCc
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPK  253 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-----~pk  253 (529)
                      +|+..++.++++|||+|++.+|.|++...        .+...|.  +++.++.      +|++++++.+++.     +++
T Consensus       114 ~a~~~~l~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~--~~~~~~~------~d~~~l~~~l~~~~~~~~~~~  177 (399)
T 3tqx_A          114 DANGGLFETLLGPEDAIISDELNHASIID--------GIRLCKA--QRYRYKN------NAMGDLEAKLKEADEKGARFK  177 (399)
T ss_dssp             HHHHTTHHHHCCTTCEEEEETTCCHHHHH--------HHHSCCS--EEEEECT------TCTTHHHHHHHHHHTTTCSSE
T ss_pred             HHHHHHHHHhcCCCCEEEECCcccHHHHH--------HHHHcCC--ceeEeCC------CCHHHHHHHHHhhhccCCCce
Confidence            99999999999999999999998865431        2344554  5556543      5778888888764     789


Q ss_pred             EEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC----CC-CCcccEEEecccccccCCCCeEEEe
Q 009673          254 LIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA----DP-FKYCDVVTTTTHKSLRGPRGGMIFF  326 (529)
Q Consensus       254 lIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~----~~-~~~aDiv~~S~hK~l~GprgG~i~~  326 (529)
                      +|++++++||+  ..|+++|.++|++||+++|+|++|..|........    .. ....|++++|+||++.|++||++++
T Consensus       178 ~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~~  257 (399)
T 3tqx_A          178 LIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASGGYTSG  257 (399)
T ss_dssp             EEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCCEEEEE
T ss_pred             EEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCceEEEEc
Confidence            99999888876  77899999999999999999999876653221100    00 1246899999999998899999999


Q ss_pred             eCCCcchhHHHhhhcccccCC-CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc
Q 009673          327 KKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH  405 (529)
Q Consensus       327 ~~~~~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~  405 (529)
                      ++      ++.+.+.....+. ..++++...++++..+++... .+.++..+++.++++++.+.|++.|+++..+  ..+
T Consensus       258 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~  328 (399)
T 3tqx_A          258 HK------EIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKLGFQLVPG--NHP  328 (399)
T ss_dssp             CH------HHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHHTCCBCCC--SSS
T ss_pred             CH------HHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHcCCCcCCC--CCC
Confidence            88      6666665421111 133455556666666776553 3457888999999999999999988887643  345


Q ss_pred             eEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          406 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       406 ~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      ++++.+.. +.+..++.+.|.++||.+.....|+.  +...+.+||+++..    .+++|++++++.|+++++.
T Consensus       329 ~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~~~--~~~~~~iRi~~~~~----~~~~~i~~~~~~l~~~~~~  395 (399)
T 3tqx_A          329 IIPVMLGD-AQLATNMADHLLQEGIYVVGFSYPVV--PMGKARIRVQMSAV----HTQQQLDRAIEAFGQVGKK  395 (399)
T ss_dssp             EEEEEEEC-HHHHHHHHHHHHHTTEECCEECTTTS--CTTCEEEEEECCTT----CCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCC-HHHHHHHHHHHHHCCCEEeeeCCCCC--CCCCceEEEEeecC----CCHHHHHHHHHHHHHHHHH
Confidence            66666542 22456777788788999864322211  22356899997643    4589999999999998763

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=99.96  E-value=5.8e-27  Score=242.48  Aligned_cols=335  Identities=13%  Similarity=0.074  Sum_probs=233.8

Q ss_pred             ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673          104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE  183 (529)
Q Consensus       104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~  183 (529)
                      .+.+.++...+++.|++++...+...+         +   .....+....++++++++|.+.++.  .+..++|++|+..
T Consensus        24 ~~~~~p~p~~~~~~v~~a~~~~~~~~~---------~---~~~~~~~~~l~~~la~~~~~~~~~~--v~~~~gg~~al~~   89 (393)
T 3kgw_A           24 RLLLGPGPSNLAPRVLAAGSLRMIGHM---------Q---KEMLQIMEEIKQGIQYVFQTRNPLT--LVVSGSGHCAMET   89 (393)
T ss_dssp             CEECSSSCCCCCHHHHHHTTCCCCCTT---------S---HHHHHHHHHHHHHHHHHHTCCCSEE--EEESCCTTTHHHH
T ss_pred             ceeccCCCCCCCHHHHHHhcccccCcc---------c---HHHHHHHHHHHHHHHHHhCCCCCcE--EEEeCCcHHHHHH
Confidence            466777777889999999976432211         1   1122333445688999999975421  2344566799999


Q ss_pred             HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 009673          184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP  263 (529)
Q Consensus       184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p  263 (529)
                      ++.++++|||+|+++.+.+.++   .+   ...+...|.  +++.++++ +++.+|+++|++.+++.++++|++++++||
T Consensus        90 ~~~~~~~~gd~vl~~~~~~~~~---~~---~~~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~np  160 (393)
T 3kgw_A           90 ALFNLLEPGDSFLTGTNGIWGM---RA---AEIADRIGA--RVHQMIKK-PGEHYTLQEVEEGLAQHKPVLLFLVHGESS  160 (393)
T ss_dssp             HHHHHCCTTCEEEEEESSHHHH---HH---HHHHHHTTC--EEEEEECC-TTCCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred             HHHhcCCCCCEEEEEeCCchhH---HH---HHHHHHcCC--ceEEEeCC-CCCCCCHHHHHHHHhhCCCcEEEEeccCCc
Confidence            9999999999999987543211   10   012233454  66666665 356899999999998778999999988887


Q ss_pred             C--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh
Q 009673          264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI  340 (529)
Q Consensus       264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i  340 (529)
                      +  ..|+++|.++|++||++||+|++|..|....+...   .++|++++|+||++.|+.| |++++++      ++.+.+
T Consensus       161 tG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~---~~~d~~~~s~sK~~~~~~g~g~~~~~~------~~~~~~  231 (393)
T 3kgw_A          161 TGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQ---QGIDIMYSSSQKVLNAPPGISLISFND------KAKYKV  231 (393)
T ss_dssp             TTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTT---TTCCEEEEESSSTTCCCSSCEEEEECH------HHHHHH
T ss_pred             chhhccHHHHHHHHHHcCCEEEEECCccccCcccchhh---cCCCEEEecCcccccCCCceeEEEECH------HHHHHH
Confidence            6  67899999999999999999999876643222111   1579999999999977766 9999987      566555


Q ss_pred             ccccc----------------------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEe
Q 009673          341 NNAVF----------------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV  398 (529)
Q Consensus       341 ~~~~~----------------------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~  398 (529)
                      .....                      ....++++...++++..+++.....++++..+++.++++.+.+.|++.|+++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~  311 (393)
T 3kgw_A          232 YSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEMGLKFF  311 (393)
T ss_dssp             HTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBS
T ss_pred             hccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeec
Confidence            33211                      11235667777777777777655445688899999999999999999888876


Q ss_pred             cCCC---CCceEEEccCCCCCcHHHHHHhHhcC-CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673          399 SGGS---DNHLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH  474 (529)
Q Consensus       399 ~~gt---~~~~~~v~~~~~~i~~~~~~~~L~~~-GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~  474 (529)
                      .+..   ...+.++.+. .+.+..++.+.|.+. ||.+..+..     +..++++||++...+   .+++|++++++.|+
T Consensus       312 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~-----~~~~~~iRi~~~~~~---~~~~~i~~~~~~l~  382 (393)
T 3kgw_A          312 VKDPEIRLPTITTVTVP-AGYNWRDIVSYVLDHFSIEISGGLG-----PTEERVLRIGLLGYN---ATTENVDRVAEALR  382 (393)
T ss_dssp             SSSGGGBCSSEEEEECC-TTBCHHHHHHHHHHHHCEECBCCCG-----GGTTTEEEEECCGGG---CCHHHHHHHHHHHH
T ss_pred             cCChhhcCCeEEEEeCC-CCCCHHHHHHHHHHhCCEEEeCCcc-----cCCCCEEEEEecccC---CCHHHHHHHHHHHH
Confidence            4211   1233445543 355677777777655 999964321     224578999963322   25899999999999


Q ss_pred             HHHHH
Q 009673          475 EGVEI  479 (529)
Q Consensus       475 ~~~~~  479 (529)
                      +++..
T Consensus       383 ~~l~~  387 (393)
T 3kgw_A          383 EALQH  387 (393)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            98864

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=99.95  E-value=8e-27  Score=243.84  Aligned_cols=345  Identities=17%  Similarity=0.145  Sum_probs=237.2

Q ss_pred             ceeEecCCC-CCcHHHHHHHhhhhhccCCCCCCC--CCCCCCchhHHHHHHHHHHHHHHHcCC-CCCCCceeeecCChHH
Q 009673          104 SLELIASEN-FTSRAVMEAVGSCLTNKYSEGLPG--KRYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGSP  179 (529)
Q Consensus       104 ~i~L~asen-~~~~~V~eal~~~l~~~y~~G~p~--~r~~~g~~~~d~lE~~a~~~la~~~g~-~~~~~~~~V~~~sGs~  179 (529)
                      .+.|..+++ .+|+.|++++...+.+.+.  .+.  ...|+ ....+.++ .+++.+++++|. +++.   .+...+|++
T Consensus        29 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~--~~~~~~~~y~-~~~~~~~~-~l~~~la~~~~~~~~~~---v~~~~g~t~  101 (420)
T 1t3i_A           29 LVYLDNAATSQKPRAVLEKLMHYYENDNA--NVHRGAHQLS-VRATDAYE-AVRNKVAKFINARSPRE---IVYTRNATE  101 (420)
T ss_dssp             CEECBTTTCCCCCHHHHHHHHHHHHHTCC--CC--CCSHHH-HHHHHHHH-HHHHHHHHHTTCSCGGG---EEEESSHHH
T ss_pred             eEEecCCccCCCCHHHHHHHHHHHHhccC--CCCcccchHH-HHHHHHHH-HHHHHHHHHcCCCCCCe---EEEcCChHH
Confidence            577776554 5789999999888754321  221  11121 11112223 455889999998 4432   233455669


Q ss_pred             HHHHHHHhh----cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673          180 ANFEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI  255 (529)
Q Consensus       180 A~~~~l~al----l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI  255 (529)
                      |+..++.++    ++|||+|+++++.|.+.... +.   ..+...|.  +++.++++ +++.+|+++|++++++ ++++|
T Consensus       102 a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~-~~---~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~-~~~~v  173 (420)
T 1t3i_A          102 AINLVAYSWGMNNLKAGDEIITTVMEHHSNLVP-WQ---MVAAKTGA--VLKFVQLD-EQESFDLEHFKTLLSE-KTKLV  173 (420)
T ss_dssp             HHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHH-HH---HHHHHHCC--EEEEECBC-TTSSBCHHHHHHHCCT-TEEEE
T ss_pred             HHHHHHHHhhhcccCCCCEEEECcchhHHHHHH-HH---HHHHhcCc--EEEEeccC-CCCCcCHHHHHHhhCC-CceEE
Confidence            999999999    99999999999988764210 10   01123344  66677776 5678999999999987 89999


Q ss_pred             EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcc
Q 009673          256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVL  332 (529)
Q Consensus       256 i~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~  332 (529)
                      ++++++||+  ..|+++|.++|+++|+++|+|++|..|....+....   +.|++++|+||.+ |+.| |++++++    
T Consensus       174 ~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~di~~~s~sK~~-~~~g~G~~~~~~----  245 (420)
T 1t3i_A          174 TVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLI---DCDWLVASGHKMC-APTGIGFLYGKE----  245 (420)
T ss_dssp             EEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH---TCSEEEEEGGGTT-SCTTCEEEEECH----
T ss_pred             EEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhc---CCCEEEEehhhhc-CCCceEEEEEch----
Confidence            998888775  788999999999999999999998876432111000   4799999999965 5655 9999987    


Q ss_pred             hhHHHhhhcccccCC--------------------CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673          333 GVELESAINNAVFPG--------------------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE  392 (529)
Q Consensus       333 ~~~l~~~i~~~~~p~--------------------~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~  392 (529)
                        ++.+++......+                    ..++++..+++++..+++.+...++++..+++.++++.+.+.|++
T Consensus       246 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~  323 (420)
T 1t3i_A          246 --EILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQ  323 (420)
T ss_dssp             --HHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             --HHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence              6777665433211                    135667777777766777654335678888899999999999998


Q ss_pred             c-CcEEecCCC----CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC--CCCC-CCeEEEccCCCccCCCCHH
Q 009673          393 L-GYKLVSGGS----DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK--SALV-PGGIRIGSPAMTTRGFSEK  464 (529)
Q Consensus       393 ~-G~~v~~~gt----~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~--~~~~-~~~iRig~~~~tt~g~~~~  464 (529)
                      . |++++.+..    ...++++.+.  +.+..++.+.|.+.||.+..+..+...  ..++ ++++||++...    .+++
T Consensus       324 ~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~----~~~~  397 (420)
T 1t3i_A          324 IPQLRLYGPNPKHGDRAALASFNVA--GLHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFY----NTKE  397 (420)
T ss_dssp             CTTEEEESCCGGGSCBCSEEEEEET--TBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTT----CCHH
T ss_pred             CCCeEEeCCCccccccCCEEEEEEC--CCCHHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecCCC----CCHH
Confidence            5 888876531    2455566654  346677888999999998543211000  0012 57899997643    3589


Q ss_pred             HHHHHHHHHHHHHHH
Q 009673          465 EFVAIADFIHEGVEI  479 (529)
Q Consensus       465 d~~~la~~i~~~~~~  479 (529)
                      |++++++.|+++++.
T Consensus       398 ~i~~~~~~l~~~~~~  412 (420)
T 1t3i_A          398 EIDLFLQSLQATIRF  412 (420)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999988763

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=99.95  E-value=5.4e-27  Score=238.91  Aligned_cols=328  Identities=14%  Similarity=0.096  Sum_probs=231.3

Q ss_pred             eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC-hHHHHHH
Q 009673          105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPANFE  183 (529)
Q Consensus       105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s-Gs~A~~~  183 (529)
                      +.+++++.++|+.|++++...+.+.        ++   .. ..+....+++++++++|.+.+.  .+|.+++ |++|+..
T Consensus         2 ~~~~~gp~~~~~~v~~a~~~~~~~~--------~~---~~-~~~~~~~l~~~la~~~g~~~~~--~~v~~t~g~t~a~~~   67 (353)
T 2yrr_A            2 LLLTPGPTPIPERVQKALLRPMRGH--------LD---PE-VLRVNRAIQERLAALFDPGEGA--LVAALAGSGSLGMEA   67 (353)
T ss_dssp             EECSSSSCCCCHHHHGGGGSCCCCT--------TC---HH-HHHHHHHHHHHHHHHHCCCTTC--EEEEESSCHHHHHHH
T ss_pred             ccCCCCCCCCCHHHHHHHhcccccc--------cC---HH-HHHHHHHHHHHHHHHhCCCCCC--ceEEEcCCcHHHHHH
Confidence            5677888889999999998766431        11   11 2233445668999999996211  1344455 5599999


Q ss_pred             HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 009673          184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP  263 (529)
Q Consensus       184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p  263 (529)
                      ++.++++  |+|++++++|.++ .  +   ...+...|.  +++.++++ +++.+|+++|++.+++.++++|++++++||
T Consensus        68 ~~~~~~~--d~vl~~~~~~~~~-~--~---~~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~np  136 (353)
T 2yrr_A           68 GLANLDR--GPVLVLVNGAFSQ-R--V---AEMAALHGL--DPEVLDFP-PGEPVDPEAVARALKRRRYRMVALVHGETS  136 (353)
T ss_dssp             HHHTCSC--CCEEEEECSHHHH-H--H---HHHHHHTTC--CEEEEECC-TTSCCCHHHHHHHHHHSCCSEEEEESEETT
T ss_pred             HHHHhcC--CcEEEEcCCCchH-H--H---HHHHHHcCC--ceEEEeCC-CCCCCCHHHHHHHHHhCCCCEEEEEccCCC
Confidence            9999887  8999988766543 1  1   011233454  55666665 357899999999997657999999888887


Q ss_pred             C--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCcchhHHHh
Q 009673          264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES  338 (529)
Q Consensus       264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~  338 (529)
                      +  ..|+++|.++|+++|+++|+|++|..|...     .++.  ++|++++|+||++.|+.| |++++++      ++.+
T Consensus       137 tG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~-----~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~------~~~~  205 (353)
T 2yrr_A          137 TGVLNPAEAIGALAKEAGALFFLDAVTTLGMLP-----FSMRAMGVDYAFTGSQKCLSAPPGLAPIAASL------EARK  205 (353)
T ss_dssp             TTEECCHHHHHHHHHHHTCEEEEECTTTTTTSC-----CCHHHHTCSEEECCTTSTTCCCSSCEEEEECH------HHHH
T ss_pred             cceecCHHHHHHHHHHcCCeEEEEcCccccccc-----ccccccCceEEEecCcccccCCCceEEEEECH------HHHH
Confidence            6  789999999999999999999998655331     1222  469999999999888776 9999988      5655


Q ss_pred             hhcc---c----------c-cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCC-CC
Q 009673          339 AINN---A----------V-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG-SD  403 (529)
Q Consensus       339 ~i~~---~----------~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~g-t~  403 (529)
                      ++..   .          . .....++++...++++..+++.....++++..+++.++++++.+.|++.|+++..+. ..
T Consensus       206 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~  285 (353)
T 2yrr_A          206 AFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKARGFRPYPKASPL  285 (353)
T ss_dssp             HCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEESCSSSBC
T ss_pred             HhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCCccccCccCC
Confidence            5531   0          0 012235667777777777777654444678889999999999999988888877532 13


Q ss_pred             CceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH-HHHHHHHHHHH
Q 009673          404 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV-AIADFIHEGVE  478 (529)
Q Consensus       404 ~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~-~la~~i~~~~~  478 (529)
                      ++++++.+. .+.+..++.+.|.+.||.+..+..+     ..++++||+++...    +++|++ ++++.|+++++
T Consensus       286 ~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~g~~~-----~~~~~iRi~~~~~~----~~~~~~~~~~~~l~~~l~  351 (353)
T 2yrr_A          286 PTVLVVRPP-EGVDADRLVRALYAEGVAVAGGIGP-----TRGQVLRLGLMGEG----ARREAYQAFLKALDRALA  351 (353)
T ss_dssp             TTEEEEECC-TTCCHHHHHHHHHHTTEECEECCGG-----GTTTCEEEECSGGG----SCHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEECC-CCCCHHHHHHHHHHCCEEEeCCccc-----cCCCeEEEecCccC----CHHHHHHHHHHHHHHHHh
Confidence            455566663 3567788888888889998643211     23578999985443    368898 99999988765

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=99.95  E-value=1e-26  Score=241.69  Aligned_cols=343  Identities=15%  Similarity=0.114  Sum_probs=237.2

Q ss_pred             ceeEecCCC-CCcHHHHHHHhhhhhccCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHcCC-CCCCCceeeecCChHHH
Q 009673          104 SLELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGSPA  180 (529)
Q Consensus       104 ~i~L~asen-~~~~~V~eal~~~l~~~y~~G~p~~-r~~~g~~~~d~lE~~a~~~la~~~g~-~~~~~~~~V~~~sGs~A  180 (529)
                      .+.|..+++ +.|+.|++++...+.+.+  +.+.. .+..+.. .......+++++++++|. +++.   .+..++|++|
T Consensus        24 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~~~~~~~---v~~~~g~t~a   97 (406)
T 1kmj_A           24 LAYLDSAASAQKPSQVIDAEAEFYRHGY--AAVHRGIHTLSAQ-ATEKMENVRKRASLFINARSAEE---LVFVRGTTEG   97 (406)
T ss_dssp             CEECCTTTCCCCCHHHHHHHHHHHHHTC--CCCSSCSSHHHHH-HHHHHHHHHHHHHHHTTCSCGGG---EEEESSHHHH
T ss_pred             eEEecCCccCCCCHHHHHHHHHHHHhhc--CCCCCCcchHHHH-HHHHHHHHHHHHHHHcCCCCCCe---EEEeCChhHH
Confidence            467765543 678999999998876533  12211 0110111 122233456889999998 4432   2333455599


Q ss_pred             HHHHHHhh----cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673          181 NFEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII  256 (529)
Q Consensus       181 ~~~~l~al----l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi  256 (529)
                      +..++.++    ++|||+|+++++.|.+.+.. +.   ..+...|.  +++.++++ +++.+|+++|++.+++ ++++|+
T Consensus        98 ~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~-~~---~~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~l~~-~~~~v~  169 (406)
T 1kmj_A           98 INLVANSWGNSNVRAGDNIIISQMEHHANIVP-WQ---MLCARVGA--ELRVIPLN-PDGTLQLETLPTLFDE-KTRLLA  169 (406)
T ss_dssp             HHHHHHHTHHHHCCTTCEEEEETTCCGGGTHH-HH---HHHHHHTC--EEEEECBC-TTSCBCGGGHHHHCCT-TEEEEE
T ss_pred             HHHHHHHhhhhcCCCCCEEEEecccchHHHHH-HH---HHHHhCCC--EEEEEecC-CCCCcCHHHHHHHhcc-CCeEEE
Confidence            99999999    89999999999988665321 10   01223354  66677776 4578999999999987 899999


Q ss_pred             EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCc
Q 009673          257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPV  331 (529)
Q Consensus       257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~  331 (529)
                      +++++||+  ..|+++|.++|++||+++|+|++|..|....     .+.  +.|++++|+||++ ||.| |++++++   
T Consensus       170 ~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~-----~~~~~~~d~~~~s~~K~~-g~~G~G~~~~~~---  240 (406)
T 1kmj_A          170 ITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPV-----DVQALDCDFYVFSGHKLY-GPTGIGILYVKE---  240 (406)
T ss_dssp             EESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCC-----CHHHHTCSEEEEEGGGTT-SCTTCEEEEECH---
T ss_pred             EeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCC-----cccccCCCEEEEEchhcc-CCCCcEEEEEeH---
Confidence            98887775  7889999999999999999999987664321     111  5799999999988 7777 9999987   


Q ss_pred             chhHHHhhhcccccC---------------------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 009673          332 LGVELESAINNAVFP---------------------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL  390 (529)
Q Consensus       332 ~~~~l~~~i~~~~~p---------------------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L  390 (529)
                         ++.+++......                     ...|+++..+++++..+++.+...++++..+++.++++++.+.|
T Consensus       241 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L  317 (406)
T 1kmj_A          241 ---ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQL  317 (406)
T ss_dssp             ---HHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred             ---HHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence               677666543211                     11456777788887667776543456778888889999999999


Q ss_pred             Hhc-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC--CCC-CCCeEEEccCCCccCCCCHHHH
Q 009673          391 VEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK--SAL-VPGGIRIGSPAMTTRGFSEKEF  466 (529)
Q Consensus       391 ~~~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~--~~~-~~~~iRig~~~~tt~g~~~~d~  466 (529)
                      ++. |+++..+.....++++.+.  +.+..++.+.|.+.||.+..+......  ..+ .++.+||+++..+    +++|+
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~----t~~~i  391 (406)
T 1kmj_A          318 ESVPDLTLYGPQNRLGVIAFNLG--KHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYN----THEEV  391 (406)
T ss_dssp             TTSTTEEEESCTTCCSEEEEEET--TCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTC----CHHHH
T ss_pred             hcCCCeEEecCCCcCCEEEEEEC--CCCHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCC----CHHHH
Confidence            885 8887764212445556653  456777888999999998543210000  001 1578999987543    58999


Q ss_pred             HHHHHHHHHHHH
Q 009673          467 VAIADFIHEGVE  478 (529)
Q Consensus       467 ~~la~~i~~~~~  478 (529)
                      +++++.|+++++
T Consensus       392 ~~~~~~l~~~~~  403 (406)
T 1kmj_A          392 DRLVTGLQRIHR  403 (406)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999998875

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=99.95  E-value=1.6e-26  Score=239.87  Aligned_cols=329  Identities=13%  Similarity=0.083  Sum_probs=230.1

Q ss_pred             eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecC-ChHHHHHH
Q 009673          105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL-SGSPANFE  183 (529)
Q Consensus       105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~-sGs~A~~~  183 (529)
                      ..+.++..++++.|++++...+.+.|          + .. ..++.+.+++++++++|++++.   +|.++ +|++|+..
T Consensus        36 ~l~~~~~~~~~~~v~~a~~~~~~~~~----------~-~~-~~~~~~~~~~~la~~~g~~~~~---~v~~t~g~t~al~~  100 (393)
T 1vjo_A           36 LLLGPGPSNAHPSVLQAMNVSPVGHL----------D-PA-FLALMDEIQSLLRYVWQTENPL---TIAVSGTGTAAMEA  100 (393)
T ss_dssp             EECSSSCCCCCHHHHHHHSSCCCCTT----------S-HH-HHHHHHHHHHHHHHHHTCCCSC---EEEESSCHHHHHHH
T ss_pred             eeccCCCCCCCHHHHHHHhccccccc----------C-HH-HHHHHHHHHHHHHHHhCCCCCc---EEEEeCchHHHHHH
Confidence            44455666789999999987654322          1 11 2344445668999999997541   23344 55699999


Q ss_pred             HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 009673          184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP  263 (529)
Q Consensus       184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p  263 (529)
                      ++.++++|||+|++++|.|.+.   .+   ...+...|.  +++.++++ +++.+|+++|++.+++.++++|++++++||
T Consensus       101 ~~~~~~~~gd~Vl~~~~~~~~~---~~---~~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~np  171 (393)
T 1vjo_A          101 TIANAVEPGDVVLIGVAGYFGN---RL---VDMAGRYGA--DVRTISKP-WGEVFSLEELRTALETHRPAILALVHAETS  171 (393)
T ss_dssp             HHHHHCCTTCEEEEEESSHHHH---HH---HHHHHHTTC--EEEEEECC-TTCCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred             HHHhccCCCCEEEEEcCChhHH---HH---HHHHHHcCC--ceEEEecC-CCCCCCHHHHHHHHhhCCceEEEEeccCCC
Confidence            9999999999999999876541   01   112234454  66666676 357899999999997657899999888777


Q ss_pred             C--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCcchhHHHh
Q 009673          264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES  338 (529)
Q Consensus       264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~  338 (529)
                      +  ..|+++|.++|+++|+++|+|++|..|...     ..+.  ++|++++|+||++.+|.+ |++++++      ++.+
T Consensus       172 tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~-----~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~------~~~~  240 (393)
T 1vjo_A          172 TGARQPLEGVGELCREFGTLLLVDTVTSLGGVP-----IFLDAWGVDLAYSCSQKGLGCSPGASPFTMSS------RAIE  240 (393)
T ss_dssp             TTEECCCTTHHHHHHHHTCEEEEECTTTTTTSC-----CCTTTTTCSEEECCSSSTTCSCSSCEEEEECH------HHHH
T ss_pred             cceeccHHHHHHHHHHcCCEEEEECCccccCcC-----CcccccCccEEEEcCcccccCCCceEEEEECH------HHHH
Confidence            6  678999999999999999999998865432     1222  579999999999977655 9999987      6666


Q ss_pred             hhccc-------cc------------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec
Q 009673          339 AINNA-------VF------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS  399 (529)
Q Consensus       339 ~i~~~-------~~------------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~  399 (529)
                      .+...       .+            ....|+++...++++..+++.....++++..+++.++++.+.+.|++.|+++..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~  320 (393)
T 1vjo_A          241 KLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHV  320 (393)
T ss_dssp             HHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSS
T ss_pred             HHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcCCcccC
Confidence            55221       00            111236677777777778876543346788899999999999999888888765


Q ss_pred             CCC--CCceEEEccCCCCCcHHHHHHhHhcC-CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          400 GGS--DNHLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       400 ~gt--~~~~~~v~~~~~~i~~~~~~~~L~~~-GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      +..  ..+++++.+. .+.+..++.+.|.+. ||.+..+..+     ..++++||++..++   .++++++++++.|+++
T Consensus       321 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~-----~~~~~iRis~~~~~---~~~~~i~~~~~~l~~~  391 (393)
T 1vjo_A          321 EKEYRLPTLTTVCIP-DGVDGKAVARRLLNEHNIEVGGGLGE-----LAGKVWRVGLMGFN---SRKESVDQLIPALEQV  391 (393)
T ss_dssp             CGGGBCSSEEEEECC-TTCCHHHHHHHHHHHHCEECEECCGG-----GTTTEEEEECCGGG---CSHHHHHHHHHHHHHH
T ss_pred             CccccCCcEEEEEcC-CCCCHHHHHHHHHhhCCEEEecCccc-----cCCCEEEEeCCccC---ChHHHHHHHHHHHHHH
Confidence            421  1234455552 345677787777765 9998543211     23578999953332   2467899999999876


Q ss_pred             H
Q 009673          477 V  477 (529)
Q Consensus       477 ~  477 (529)
                      +
T Consensus       392 l  392 (393)
T 1vjo_A          392 L  392 (393)
T ss_dssp             H
T ss_pred             h
Confidence            5

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=99.95  E-value=5e-27  Score=241.58  Aligned_cols=335  Identities=15%  Similarity=0.164  Sum_probs=231.4

Q ss_pred             CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-HHHHHHHHHhh
Q 009673          110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAI  188 (529)
Q Consensus       110 sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s~A~~~~l~al  188 (529)
                      +..++++.|++++...+.+.+  ++|...|..+ ....++.+.+++++++++|++++    +|.+++| ++|+..++.++
T Consensus         8 ~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~la~~~~~~~~----~i~~~~g~~~a~~~~~~~~   80 (382)
T 4hvk_A            8 SAKPVDERILEAMLPYMTESF--GNPSSVHSYG-FKAREAVQEAREKVAKLVNGGGG----TVVFTSGATEANNLAIIGY   80 (382)
T ss_dssp             TCCCCCHHHHHHHHHHHHTSC--CCTTCSSHHH-HHHHHHHHHHHHHHHHHTTCTTE----EEEEESSHHHHHHHHHHHH
T ss_pred             CcCCCCHHHHHHHHHHHHhhc--CCCcccchHH-HHHHHHHHHHHHHHHHHcCCCcC----eEEEECCchHHHHHHHHHh
Confidence            345789999999998886644  3444332222 22234444567899999999864    3444555 59999999998


Q ss_pred             c----CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC
Q 009673          189 L----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR  264 (529)
Q Consensus       189 l----~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~  264 (529)
                      +    +|||+|++++++|.++....     ......|.  +++.++++ +++.+|+++|++.+++ ++++|++++++||+
T Consensus        81 ~~~~~~~gd~vi~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~npt  151 (382)
T 4hvk_A           81 AMRNARKGKHILVSAVEHMSVINPA-----KFLQKQGF--EVEYIPVG-KYGEVDVSFIDQKLRD-DTILVSVQHANNEI  151 (382)
T ss_dssp             HHHHGGGCCEEEEETTCCHHHHHHH-----HHHHHTTC--EEEEECBC-TTSCBCHHHHHHHCCT-TEEEEECCSBCTTT
T ss_pred             hhhhcCCCCEEEECCCCcHHHHHHH-----HHHHhcCC--EEEEeccC-CCCCcCHHHHHHHhcc-CceEEEEECCCCCc
Confidence            7    99999999998876553211     01111344  67777776 5678999999999987 88999998888876


Q ss_pred             --CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhc
Q 009673          265 --DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN  341 (529)
Q Consensus       265 --~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~  341 (529)
                        ..|+++|.++|++||+ +++|++|+.|....+...   .++|++++|+||++ |+.| |+++++++      .  .+.
T Consensus       152 G~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~---~~~d~~~~s~~K~~-g~~g~g~~~~~~~------~--~~~  218 (382)
T 4hvk_A          152 GTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEK---IGADMLTISSNDIY-GPKGVGALWIRKE------A--KLQ  218 (382)
T ss_dssp             CBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHH---HTCSEEEEESGGGT-SCTTCEEEEEETT------C--CCC
T ss_pred             eeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchh---cCCCEEEEeHHHhc-CCCceEEEEEcCc------c--CcC
Confidence              7899999999999999 999999887654222110   04799999999975 6765 99999874      2  222


Q ss_pred             ccccC------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCC--CceEEEccC
Q 009673          342 NAVFP------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSD--NHLVLVDLR  412 (529)
Q Consensus       342 ~~~~p------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~--~~~~~v~~~  412 (529)
                      .....      ...++++...++++..+++... .++++..+++.++++++.+.|++. |+.+..+...  .+++.+.+ 
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-  296 (382)
T 4hvk_A          219 PVILGGGQENGLRSGSENVPSIVGFGKAAEITA-MEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRF-  296 (382)
T ss_dssp             CSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEE-
T ss_pred             cccccCCCcCccccCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEE-
Confidence            21111      1145567777777777776543 456788889999999999999884 8887654211  23444444 


Q ss_pred             CCCCcHHHHHHhHhcCCeEEcCCCCCCCCC--C------CC------CCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          413 PMGIDGARVEKILDMASITLNKNSVPGDKS--A------LV------PGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       413 ~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~--~------~~------~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                       .+.+..++.+.|.++||.+..+..++...  +      +.      +++|||++...    .+++|++++++.|+++++
T Consensus       297 -~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~----~t~e~i~~~~~~l~~~~~  371 (382)
T 4hvk_A          297 -SYIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRY----NTDEDVDRLLEVLPGVIE  371 (382)
T ss_dssp             -TTCCHHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTT----CCHHHHHHHHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCC----CCHHHHHHHHHHHHHHHH
Confidence             34577888899999999986543211100  0      00      47899998654    358999999999999887


Q ss_pred             HH
Q 009673          479 IT  480 (529)
Q Consensus       479 ~~  480 (529)
                      ..
T Consensus       372 ~~  373 (382)
T 4hvk_A          372 RL  373 (382)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=99.95  E-value=1.1e-26  Score=237.82  Aligned_cols=333  Identities=15%  Similarity=0.107  Sum_probs=227.4

Q ss_pred             ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673          104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE  183 (529)
Q Consensus       104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~  183 (529)
                      .+++.++...++++|++++...+.+.    ++.  +  ..+..++    .++++++++|. ++.....+...+|++|+..
T Consensus         5 ~~~~~~gp~~~~~~v~~a~~~~~~~~----~~~--~--~~~~~~~----l~~~la~~~g~-~~~~~~v~~~~g~t~a~~~   71 (366)
T 1m32_A            5 YLLLTPGPLTTSRTVKEAMLFDSCTW----DDD--Y--NIGVVEQ----IRQQLTALATA-SEGYTSVLLQGSGSYAVEA   71 (366)
T ss_dssp             CEECSSSSCCCCHHHHHTTCCCCCTT----SHH--H--HTTTHHH----HHHHHHHHHCS-SSSEEEEEEESCHHHHHHH
T ss_pred             cccccCCCcCCCHHHHHHHhhhhcCC----CHH--H--HHHHHHH----HHHHHHHHhCC-CCcCcEEEEecChHHHHHH
Confidence            47777776678999999997643110    000  0  0022333    44788889993 3211112344556699999


Q ss_pred             HHHhhcCCCCEEEEcC-CCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-CCcEEEEcCCC
Q 009673          184 VYTAILKPHDRIMGLD-LPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASA  261 (529)
Q Consensus       184 ~l~all~pGD~Vl~~~-~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-~pklIi~~~s~  261 (529)
                      ++.++++|||+|++++ +.|++.+.       ..+...|.  +++.++++ +++.+|+++|++.+++. ++++|++..++
T Consensus        72 ~~~~~~~~gd~vi~~~~~~~~~~~~-------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~  141 (366)
T 1m32_A           72 VLGSALGPQDKVLIVSNGAYGARMV-------EMAGLMGI--AHHAYDCG-EVARPDVQAIDAILNADPTISHIAMVHSE  141 (366)
T ss_dssp             HHHHSCCTTCCEEEEESSHHHHHHH-------HHHHHHTC--CEEEEECC-TTSCCCHHHHHHHHHHCTTCCEEEEESEE
T ss_pred             HHHHhcCCCCeEEEEeCCCccHHHH-------HHHHHhCC--ceEEEeCC-CCCCCCHHHHHHHHhcCCCeEEEEEeccc
Confidence            9999999999988776 43332110       11223354  55566665 45789999999999874 58898888777


Q ss_pred             CCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHh
Q 009673          262 YPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES  338 (529)
Q Consensus       262 ~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~  338 (529)
                      ||+  ..|+++|.++|++||+++|+|++|..|....+...   .+.|++++|+||++.||.| |++++++      ++.+
T Consensus       142 nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~---~~~di~~~s~~K~~~~~~g~G~~~~~~------~~~~  212 (366)
T 1m32_A          142 TTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAA---LHIDYLISSANKCIQGVPGFAFVIARE------QKLA  212 (366)
T ss_dssp             TTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTT---TTCSEEEEESSSTTCCCSSEEEEEEEH------HHHT
T ss_pred             CCcceecCHHHHHHHHHHcCCEEEEECCccccCcCccccc---cCccEEEecCcccccCCCceEEEEECH------HHHH
Confidence            765  78999999999999999999999876644222110   1479999999999988877 9999998      6666


Q ss_pred             hhcccccC-----------------CCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHhcCcEEecC
Q 009673          339 AINNAVFP-----------------GLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSG  400 (529)
Q Consensus       339 ~i~~~~~p-----------------~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~~G~~v~~~  400 (529)
                      ++.....+                 ...++++...++++..+++.....+ +++..+++.++++++.+.|++.|+.+..+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~  292 (366)
T 1m32_A          213 ACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLD  292 (366)
T ss_dssp             TCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSC
T ss_pred             hhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHCCCeeccC
Confidence            55432100                 0124566667777777777654333 67788899999999999998888876643


Q ss_pred             C--CCCceEEEccCC-CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          401 G--SDNHLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       401 g--t~~~~~~v~~~~-~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      .  ..++++++.+.. .+.+..++.+.|.++||.+..+.    .  ..++++||+++..+    +++|++++++.|++++
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~----~--~~~~~iRi~~~~~~----~~~~i~~~~~~l~~~~  362 (366)
T 1m32_A          293 DELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGK----V--SQSDCFRIGNIGEV----YAADITALLTAIRTAM  362 (366)
T ss_dssp             GGGBCSSEEEEECCCCTTCCHHHHHHHHHHTTEECEECC----C--SSSCEEEEECCSSC----CHHHHHHHHHHHHHHC
T ss_pred             chhcCceEEEEEcCccCCCCHHHHHHHHHHCCEEEECCc----C--CCCCEEEEecCCCC----CHHHHHHHHHHHHHHH
Confidence            1  123466776642 14567788888888899985432    1  24578999987543    4899999999998765


Q ss_pred             H
Q 009673          478 E  478 (529)
Q Consensus       478 ~  478 (529)
                      .
T Consensus       363 ~  363 (366)
T 1m32_A          363 Y  363 (366)
T ss_dssp             T
T ss_pred             H
Confidence            3

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=99.95  E-value=9.8e-27  Score=241.58  Aligned_cols=333  Identities=17%  Similarity=0.104  Sum_probs=227.0

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.|+|..+++.  +++.+.+++...+.... .+|+.      .....++++...+++.+.+|++.+.  -+|.+++|+ +
T Consensus        32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~------~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~g~~~  102 (385)
T 1b5p_A           32 DLVALTAGEPDFDTPEHVKEAARRALAQGK-TKYAP------PAGIPELREALAEKFRRENGLSVTP--EETIVTVGGSQ  102 (385)
T ss_dssp             CCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CSCCC------TTCCHHHHHHHHHHHHHTTCCCCCG--GGEEEESHHHH
T ss_pred             CEEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHHHHHhCCCCCh--HHEEEcCChHH
Confidence            56888777763  57899999887765432 13332      1113456666667777777864321  145567766 9


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      |+..++.++++|||+|++++|.|.++.        ..+...|.  +++.+++++ +++.+|+++|++++++ ++++|+++
T Consensus       103 al~~~~~~l~~~gd~Vlv~~p~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~  171 (385)
T 1b5p_A          103 ALFNLFQAILDPGDEVIVLSPYWVSYP--------EMVRFAGG--VVVEVETLPEEGFVPDPERVRRAITP-RTKALVVN  171 (385)
T ss_dssp             HHHHHHHHHCCTTCEEEEEESCCTHHH--------HHHHHTTC--EEEEEECCGGGTTCCCHHHHHTTCCT-TEEEEEEE
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCchhHH--------HHHHHcCC--EEEEeecCcccCCCCCHHHHHHhcCC-CCEEEEEe
Confidence            999999999999999999999875432        12334565  666777764 3578999999999987 78999998


Q ss_pred             CCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC----cccEEEecccccc--cCCCCeEEEee
Q 009673          259 ASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSL--RGPRGGMIFFK  327 (529)
Q Consensus       259 ~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~----~aDiv~~S~hK~l--~GprgG~i~~~  327 (529)
                      +++||+  ..   ++++|.++|++||++||+|++|.. +...+ ...++.    ..+++++|+||++  +|+|.||++++
T Consensus       172 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~-~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~  249 (385)
T 1b5p_A          172 SPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEH-LLYEG-EHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGP  249 (385)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT-CBSSS-CCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEECC
T ss_pred             CCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchh-cccCC-CCCCHHHcCCCCEEEEEechhhcCCcccceEEEEeC
Confidence            899987  44   488999999999999999999653 33322 111111    3468899999987  68889999998


Q ss_pred             CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHH---hcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCC
Q 009673          328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH---AQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN  404 (529)
Q Consensus       328 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~---~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~  404 (529)
                      +      ++.+.+......+..+.+...+.+ +..+++.   . ...+++..+++.++++.+.+.|++.|+.+..+ ..+
T Consensus       250 ~------~~~~~l~~~~~~~~~~~~~~~~~a-~~~~l~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~  320 (385)
T 1b5p_A          250 K------EVIKAMASVSRQSTTSPDTIAQWA-TLEALTNQEAS-RAFVEMAREAYRRRRDLLLEGLTALGLKAVRP-SGA  320 (385)
T ss_dssp             H------HHHHHHHHHHHTTTCSCCHHHHHH-HHHHHHCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC-SBT
T ss_pred             H------HHHHHHHHHHhhccCCCCHHHHHH-HHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC-Cee
Confidence            7      676666543333333343343333 3335542   1 13356777888899999999998878876654 234


Q ss_pred             ceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          405 HLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       405 ~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      ++.|+++...+.+..++.+.|.++||.+..+...+     .++++||++.      .+++++++..+.|.+++
T Consensus       321 ~~~~~~~~~~~~~~~~l~~~l~~~gv~v~~g~~f~-----~~~~iRis~~------~~~~~i~~~l~~l~~~l  382 (385)
T 1b5p_A          321 FYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFA-----AFGHVRLSYA------TSEENLRKALERFARVL  382 (385)
T ss_dssp             TEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGT-----CTTEEEEECC------SCHHHHHHHHHHGGGGC
T ss_pred             EEEEEecCCCCCCHHHHHHHHHHCCeEEecccccC-----CCCeEEEEec------CCHHHHHHHHHHHHHHH
Confidence            55677775445677778777779999985432111     1578999964      35788888887776654

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=99.95  E-value=6.3e-26  Score=234.58  Aligned_cols=328  Identities=16%  Similarity=0.049  Sum_probs=227.3

Q ss_pred             EecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHH
Q 009673          107 LIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT  186 (529)
Q Consensus       107 L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~  186 (529)
                      +......+++.+.+++...+.+.+.  .+.     ......+++..+++++++++|++.++   .+.+.+|++|+..++.
T Consensus        35 ~~~~~~~~~~~v~~a~~~~~~~~~~--~~~-----~~~~~~~~~~~l~~~la~~~~~~~~~---i~~~~ggt~a~~~~~~  104 (397)
T 3f9t_A           35 FGSMCSNVLPITRKIVDIFLETNLG--DPG-----LFKGTKLLEEKAVALLGSLLNNKDAY---GHIVSGGTEANLMALR  104 (397)
T ss_dssp             CSCSCCCCCTHHHHHHHHHTTCCTT--SGG-----GBHHHHHHHHHHHHHHHHHTTCTTCE---EEEESCHHHHHHHHHH
T ss_pred             EEEecCCCcHHHHHHHHHHHhhcCC--Ccc-----cChhHHHHHHHHHHHHHHHhCCCCCC---EEEecCcHHHHHHHHH
Confidence            3334456788999999887754332  111     11234566667789999999998752   2344566699999999


Q ss_pred             hhcCC-------------CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCc
Q 009673          187 AILKP-------------HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK  253 (529)
Q Consensus       187 all~p-------------GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pk  253 (529)
                      ++.++             ||+|++.++.|.+..        ..+...|.  +++.++++ +++.+|+++|++.+++.+++
T Consensus       105 ~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~  173 (397)
T 3f9t_A          105 CIKNIWREKRRKGLSKNEHPKIIVPITAHFSFE--------KGREMMDL--EYIYAPIK-EDYTIDEKFVKDAVEDYDVD  173 (397)
T ss_dssp             HHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHH--------HHHHHHTC--EEEEECBC-TTSSBCHHHHHHHHHHSCCC
T ss_pred             HHHHHHHhhhhhcccCCCCeEEEECCcchhHHH--------HHHHHcCc--eeEEEeeC-CCCcCCHHHHHHHHhhcCCe
Confidence            98766             999999999876542        12334454  66777776 46889999999999876789


Q ss_pred             EEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccccccccc-------CCCCC---cccEEEecccccccC-CC
Q 009673          254 LIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-------ADPFK---YCDVVTTTTHKSLRG-PR  320 (529)
Q Consensus       254 lIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-------~~~~~---~aDiv~~S~hK~l~G-pr  320 (529)
                      +|+++.++||+  ..|+++|.++|++||++||+|++|..+.......       ..++.   ++|++++|+||++.+ .+
T Consensus       174 ~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~~~  253 (397)
T 3f9t_A          174 GIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKMGHCPIP  253 (397)
T ss_dssp             EEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGGTCSEEECCTTTTTCCCSS
T ss_pred             EEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccccCCeEEEccccccCCCCC
Confidence            88888777776  7799999999999999999999987554322110       01221   578999999999844 46


Q ss_pred             CeEEEeeCCCcchhHHHhhhcccccCCC--------CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673          321 GGMIFFKKDPVLGVELESAINNAVFPGL--------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE  392 (529)
Q Consensus       321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~--------~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~  392 (529)
                      .|+++++++     .+.+.+... .+..        .+++....+.++.+++..+...++++..+++.++++++.+.|++
T Consensus       254 ~g~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~  327 (397)
T 3f9t_A          254 SGGILFKDI-----GYKRYLDVD-APYLTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKE  327 (397)
T ss_dssp             CEEEEESSG-----GGGGGTCEE-CTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEeCH-----HHHHhhccC-CccccCCCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            688888774     454444321 1111        12322223444444555444456688889999999999999999


Q ss_pred             cCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673          393 LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF  472 (529)
Q Consensus       393 ~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~  472 (529)
                      .|+.++.+. ..+++++.+.    +..++.+.|.+.||.+....        .++++||+++..    .+++|++++++.
T Consensus       328 ~g~~~~~~~-~~~~~~~~~~----~~~~~~~~l~~~gi~v~~~~--------~~~~~Ri~~~~~----~~~e~i~~~~~~  390 (397)
T 3f9t_A          328 NNFKPVIEP-ILNIVAIEDE----DYKEVCKKLRDRGIYVSVCN--------CVKALRIVVMPH----IKREHIDNFIEI  390 (397)
T ss_dssp             TTCCBSSCC-SSSEEEEECT----THHHHHHHHHHTTCBCEECS--------SSSEEEEECCTT----CCHHHHHHHHHH
T ss_pred             CCCEEEcCC-CccEEEEEeC----CHHHHHHHHHhCCeEEeccC--------CCCEEEEEEcCC----CCHHHHHHHHHH
Confidence            888866542 3455666554    25678888888899885431        257999998643    358999999999


Q ss_pred             HHHHHH
Q 009673          473 IHEGVE  478 (529)
Q Consensus       473 i~~~~~  478 (529)
                      |+++++
T Consensus       391 l~~~l~  396 (397)
T 3f9t_A          391 LNSIKR  396 (397)
T ss_dssp             HHHHC-
T ss_pred             HHHhhC
Confidence            988754

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=99.95  E-value=1.8e-26  Score=239.65  Aligned_cols=331  Identities=12%  Similarity=0.060  Sum_probs=229.3

Q ss_pred             eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC-hHHHHHH
Q 009673          105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPANFE  183 (529)
Q Consensus       105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s-Gs~A~~~  183 (529)
                      +.+.++...+++.|++++...+.+.|            ..+.+.....+++.+++++|.+++.   +|.+++ |++|+..
T Consensus        20 ~~~~~~p~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~l~~~la~~~~~~~~~---~v~~~~g~t~al~~   84 (396)
T 2ch1_A           20 IMMGPGPSNCSKRVLTAMTNTVLSNF------------HAELFRTMDEVKDGLRYIFQTENRA---TMCVSGSAHAGMEA   84 (396)
T ss_dssp             BCCSSSSCCCCHHHHHHTTSCCCCTT------------CHHHHHHHHHHHHHHHHHHTCCCSC---EEEESSCHHHHHHH
T ss_pred             eeecCCCCCCCHHHHHHhccccccCC------------ChhHHHHHHHHHHHHHHHhCCCCCc---EEEECCcHHHHHHH
Confidence            44445555678999999876553222            1222333334568899999998641   343444 5699999


Q ss_pred             HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 009673          184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP  263 (529)
Q Consensus       184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p  263 (529)
                      ++.++++|||+|+++++.|.++...      ..+...|.  +++.++++ +++.+|+++|++.+++.++++|++++++||
T Consensus        85 ~~~~~~~~gd~vl~~~~~~~~~~~~------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~np  155 (396)
T 2ch1_A           85 MLSNLLEEGDRVLIAVNGIWAERAV------EMSERYGA--DVRTIEGP-PDRPFSLETLARAIELHQPKCLFLTHGDSS  155 (396)
T ss_dssp             HHHHHCCTTCEEEEEESSHHHHHHH------HHHHHTTC--EEEEEECC-TTSCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred             HHHHhcCCCCeEEEEcCCcccHHHH------HHHHHcCC--ceEEecCC-CCCCCCHHHHHHHHHhCCCCEEEEECCCCC
Confidence            9999999999999999877553100      11233454  56666665 367899999999998657999999888777


Q ss_pred             C--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCcchhHHHh
Q 009673          264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES  338 (529)
Q Consensus       264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~  338 (529)
                      +  ..|+++|.++|+++|+++|+|++|..|...     ..+.  ++|++++|+||++.|+.| |++++++      ++.+
T Consensus       156 tG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~-----~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~------~~~~  224 (396)
T 2ch1_A          156 SGLLQPLEGVGQICHQHDCLLIVDAVASLCGVP-----FYMDKWEIDAVYTGAQKVLGAPPGITPISISP------KALD  224 (396)
T ss_dssp             TTEECCCTTHHHHHHHTTCEEEEECTTTBTTBC-----CCTTTTTCCEEECCCC-CCCCCSSCEEEEECH------HHHH
T ss_pred             CceecCHHHHHHHHHHcCCEEEEEccccccCCc-----cchhhcCcCEEEEcCCccccCCCCeEEEEECH------HHHH
Confidence            6  678999999999999999999998765432     1222  479999999999887766 9999987      4544


Q ss_pred             hhccc-------c---------c------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcE
Q 009673          339 AINNA-------V---------F------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK  396 (529)
Q Consensus       339 ~i~~~-------~---------~------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~  396 (529)
                      .+...       .         +      ....++++...++++..+++.....++++..+++.++++++.+.|.+.|++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~  304 (396)
T 2ch1_A          225 VIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLD  304 (396)
T ss_dssp             HHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             hhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence            43211       0         0      112355666666666667776543456788889999999999999888888


Q ss_pred             EecCCC---CCceEEEccCCCCCcHHHHHHhHhc-CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673          397 LVSGGS---DNHLVLVDLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF  472 (529)
Q Consensus       397 v~~~gt---~~~~~~v~~~~~~i~~~~~~~~L~~-~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~  472 (529)
                      ++.+..   ...++++.+. .+++..++.+.|.+ +||.+..+..     +..++++||++..++   .+++|++++++.
T Consensus       305 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~~~~gi~v~~g~~-----~~~~~~iRi~~~~~~---~~~e~i~~~~~~  375 (396)
T 2ch1_A          305 IFVKDPRHRLPTVTGIMIP-KGVDWWKVSQYAMNNFSLEVQGGLG-----PTFGKAWRVGIMGEC---STVQKIQFYLYG  375 (396)
T ss_dssp             BSSCSGGGBCTTEEEEECC-TTCCHHHHHHHHHHHHCBCCBCCCG-----GGTTTEEEEECCGGG---CSHHHHHHHHHH
T ss_pred             eccCCccccCCceEEEEcC-CCCCHHHHHHHHHHhCCEEEecCcc-----ccCCCEEEEECCCCc---CCHHHHHHHHHH
Confidence            765421   1124555553 35677777777754 6999854321     123578999973322   358999999999


Q ss_pred             HHHHHHH
Q 009673          473 IHEGVEI  479 (529)
Q Consensus       473 i~~~~~~  479 (529)
                      |+++++.
T Consensus       376 l~~~l~~  382 (396)
T 2ch1_A          376 FKESLKA  382 (396)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998764

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=99.95  E-value=1.8e-26  Score=239.34  Aligned_cols=357  Identities=13%  Similarity=0.065  Sum_probs=237.5

Q ss_pred             cccCChHHHHHHHHHHHHhhcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673           83 LGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA  160 (529)
Q Consensus        83 l~~~d~~~~~~~~~e~~~~~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~  160 (529)
                      +....+..+..+.+...+..+.|+|..+++.  .++.+.+++...+.+.. .+|+.      .....++++...+++.+.
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~------~~g~~~l~~~la~~~~~~   79 (389)
T 1gd9_A            7 LELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKGL-THYGP------NIGLLELREAIAEKLKKQ   79 (389)
T ss_dssp             HHHSCCCHHHHHHHHHHTCSSCEECCCCSCSSCCCHHHHHHHHHHHHTTC-CSCCC------TTCCHHHHHHHHHHHHHH
T ss_pred             hHhCChhHHHHHHHHHhhhcCeEecCCCCCCCCCCHHHHHHHHHHHhCCC-CCCCC------CCCcHHHHHHHHHHHHHH
Confidence            3444444333333333322467888877753  57899999988775421 23332      112346676666777777


Q ss_pred             cCC--CCCCCcee-eecCC-hHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-C
Q 009673          161 FNL--DENKWGVN-VQPLS-GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-T  235 (529)
Q Consensus       161 ~g~--~~~~~~~~-V~~~s-Gs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~  235 (529)
                      +|.  +++    + |.+++ |++|+..++.++++|||+|++.+|.|.++..        .+...|.  +++.++++++ +
T Consensus        80 ~g~~~~~~----~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~  145 (389)
T 1gd9_A           80 NGIEADPK----TEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAP--------AVILAGG--KPVEVPTYEEDE  145 (389)
T ss_dssp             HCCCCCTT----TSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHH--------HHHHHTC--EEEEEECCGGGT
T ss_pred             hCCCCCCC----CeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHCCC--EEEEeccCCccC
Confidence            785  343    2 34455 4599999999999999999999998865421        2334454  5666666542 4


Q ss_pred             CCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccc-cCC--CC---Cc
Q 009673          236 GLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VAD--PF---KY  304 (529)
Q Consensus       236 ~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~--~~---~~  304 (529)
                      +.+|+++|++.+++ ++++|++++++||+  ..   ++++|.++|++||+++|+|++|..+.. .+. ...  .+   ..
T Consensus       146 ~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~  223 (389)
T 1gd9_A          146 FRLNVDELKKYVTD-KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIY-DDARHYSIASLDGMFE  223 (389)
T ss_dssp             TCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBC-TTCCCCCGGGSTTCGG
T ss_pred             CCCCHHHHHHhcCc-CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhccc-CCCCCCCHhhccCCCC
Confidence            67999999999987 78999888888876  34   589999999999999999999765432 221 111  11   24


Q ss_pred             ccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHH
Q 009673          305 CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVS  381 (529)
Q Consensus       305 aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~  381 (529)
                      .|++++|+||++  +|.|.|++++++      ++.+.+.........+. +....+++..+++..... .+++..+++.+
T Consensus       224 ~~i~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  296 (389)
T 1gd9_A          224 RTITVNGFSKTFAMTGWRLGFVAAPS------WIIERMVKFQMYNATCP-VTFIQYAAAKALKDERSWKAVEEMRKEYDR  296 (389)
T ss_dssp             GEEEEEESTTTTTCGGGCCEEEECCH------HHHHHHHHHHTTTTCSC-CHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred             CEEEEecChhhcCCcccceEEEEECH------HHHHHHHHHHhhhccCC-CHHHHHHHHHHHhCCCcchHHHHHHHHHHH
Confidence            689999999997  567889999987      67776655433222333 333344444455432111 34677788889


Q ss_pred             HHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHh-cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCC
Q 009673          382 NCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG  460 (529)
Q Consensus       382 ~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~-~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g  460 (529)
                      +++.+.+.|++.|+++..+. .++++++++...+.+..++.+.|. ++||.+..+..++   +..++++||++..     
T Consensus       297 ~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRi~~~~-----  367 (389)
T 1gd9_A          297 RRKLVWKRLNEMGLPTVKPK-GAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFG---KAGEGYVRISYAT-----  367 (389)
T ss_dssp             HHHHHHHHHHHTTCCCCCCC-BTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGC---GGGTTBEEEECCS-----
T ss_pred             HHHHHHHHHHHcCCeecCCC-eeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhC---CCCCCeEEEEecC-----
Confidence            99999999988888776532 244566666432456777777775 8999986543221   1135789999652     


Q ss_pred             CCHHHHHHHHHHHHHHHHH
Q 009673          461 FSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       461 ~~~~d~~~la~~i~~~~~~  479 (529)
                       ++++++++++.|.++++.
T Consensus       368 -~~~~i~~~l~~l~~~~~~  385 (389)
T 1gd9_A          368 -AYEKLEEAMDRMERVLKE  385 (389)
T ss_dssp             -CHHHHHHHHHHHHHHHHH
T ss_pred             -CHHHHHHHHHHHHHHHHh
Confidence             589999999999888753

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=99.95  E-value=5.2e-27  Score=243.11  Aligned_cols=338  Identities=15%  Similarity=0.125  Sum_probs=232.7

Q ss_pred             cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-HH
Q 009673          103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SP  179 (529)
Q Consensus       103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s~  179 (529)
                      +.|+|..+++  .+++.|++++...+.+. ..+|+.      .  ..++++.+++++++.+|.+.+.  .+|.+++| ++
T Consensus        28 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~------~--~~~l~~~la~~l~~~~g~~~~~--~~i~~~~g~~~   96 (391)
T 3dzz_A           28 KELPMWIAEMDFKIAPEIMASMEEKLKVA-AFGYES------V--PAEYYKAVADWEEIEHRARPKE--DWCVFASGVVP   96 (391)
T ss_dssp             TCEECCSSCCSSCCCHHHHHHHHHHHTTC-CCCCBC------C--CHHHHHHHHHHHHHHHSCCCCG--GGEEEESCHHH
T ss_pred             CceeccccCCCCCCCHHHHHHHHHHHhcC-cCCCCC------C--CHHHHHHHHHHHHHHhCCCCCH--HHEEECCCHHH
Confidence            5688877665  36899999999887542 122322      1  2466667778999999944221  14455666 59


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC--CCCCCCCHHHHHHHhhhcCCcEEEE
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD--ESTGLVDYDMLEKTAILFRPKLIIA  257 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~--~~~~~iD~d~le~~i~~~~pklIi~  257 (529)
                      |+..++.++++|||+|++.+|.|.++..        .+...|.  +++.++++  ..++.+|+++|+++++..++++|++
T Consensus        97 a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i  166 (391)
T 3dzz_A           97 AISAMVRQFTSPGDQILVQEPVYNMFYS--------VIEGNGR--RVISSDLIYENSKYSVNWADLEEKLATPSVRMMVF  166 (391)
T ss_dssp             HHHHHHHHHSCTTCEEEECSSCCHHHHH--------HHHHTTC--EEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEE
T ss_pred             HHHHHHHHhCCCCCeEEECCCCcHHHHH--------HHHHcCC--EEEEeeeeecCCceeecHHHHHHHHhccCceEEEE
Confidence            9999999999999999999988765421        2334454  66677664  2235699999999998448999999


Q ss_pred             cCCCCCC--C---CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-----ccc--EEEecccccc--cCCCCeE
Q 009673          258 GASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-----YCD--VVTTTTHKSL--RGPRGGM  323 (529)
Q Consensus       258 ~~s~~p~--~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-----~aD--iv~~S~hK~l--~GprgG~  323 (529)
                      +.++||+  .   .++++|.++|++||+++|+|++|.. +...+....++.     ..|  ++++|+||++  +|+|.|+
T Consensus       167 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~  245 (391)
T 3dzz_A          167 CNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGD-LVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAAC  245 (391)
T ss_dssp             ESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTT-CBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEE
T ss_pred             ECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEeccccc-ccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheE
Confidence            8888886  4   4789999999999999999999753 333332222221     256  8999999996  6788899


Q ss_pred             EEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEecCC
Q 009673          324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSGG  401 (529)
Q Consensus       324 i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~~g  401 (529)
                      ++++++     ++.+.+..........+++...++++..+++.. ....++..+++.++++.+.+.|++.  |+.+..+.
T Consensus       246 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~  319 (391)
T 3dzz_A          246 AIIPNP-----DLRARAEESFFLAGIGEPNLLAIPAAIAAYEEG-HDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSN  319 (391)
T ss_dssp             EECCSH-----HHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCC
T ss_pred             EEECCH-----HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccC
Confidence            999742     676666543211111123333444444566552 2235778888899999999999884  88877542


Q ss_pred             CCCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          402 SDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       402 t~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                       .+++.++++...+.+..++.+.| +++||.+..+...+   ...++.+||++.      .++++++++++.|.++++
T Consensus       320 -~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRis~~------~~~~~i~~~l~~l~~~l~  387 (391)
T 3dzz_A          320 -ASYLAWVDISALGMNAEDFCKYLREKTGLIISAGNGYR---GNGHEFVRINLA------CPKELVIDGMQRLKQGVL  387 (391)
T ss_dssp             -BSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESGGGC---TTGGGEEEEECC------SCHHHHHHHHHHHHHHHH
T ss_pred             -ceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCchhhC---CCCCCEEEEEec------CCHHHHHHHHHHHHHHHH
Confidence             34556677765456777888877 58999996543211   223578999965      358999999999998875

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=99.95  E-value=1.3e-26  Score=241.68  Aligned_cols=340  Identities=14%  Similarity=0.075  Sum_probs=233.3

Q ss_pred             ceeEecCCC-CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-HHHH
Q 009673          104 SLELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPAN  181 (529)
Q Consensus       104 ~i~L~asen-~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s~A~  181 (529)
                      .+.|..+.+ ++++.|++++...+.+.+  +.+...|..+.. .......+++++++++|++++    +|.+++| ++++
T Consensus        27 ~~~ld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~al   99 (406)
T 3cai_A           27 WVHFDAPAGMLIPDSVATTVSTAFRRSG--ASTVGAHPSARR-SAAVLDAAREAVADLVNADPG----GVVLGADRAVLL   99 (406)
T ss_dssp             CEECBGGGCCCCCHHHHHHHHHHHHHCC--SSSCSSSHHHHH-HHHHHHHHHHHHHHHHTCCGG----GEEEESCHHHHH
T ss_pred             eEEEeCCCcCCCCHHHHHHHHHHHHhcC--CCCCCccHHHHH-HHHHHHHHHHHHHHHhCCCCC----eEEEeCChHHHH
Confidence            466655443 678999999998876433  223223311111 123333456889999999754    2344555 5888


Q ss_pred             HHHHHhh---cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          182 FEVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       182 ~~~l~al---l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      ..++.++   ++|||+|++++++|.++......    .....|.  +++.++++++++.+|+++|++.+++ ++++|+++
T Consensus       100 ~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~----~~~~~g~--~v~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~  172 (406)
T 3cai_A          100 SLLAEASSSRAGLGYEVIVSRLDDEANIAPWLR----AAHRYGA--KVKWAEVDIETGELPTWQWESLISK-STRLVAVN  172 (406)
T ss_dssp             HHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHH----HHHHHBC--EEEEECCCTTTCCCCGGGHHHHCCT-TEEEEEEE
T ss_pred             HHHHHHHhhccCCCCEEEEcCCccHHHHHHHHH----HHHhcCC--eEEEEecCcccCCcCHHHHHHHhCC-CceEEEEe
Confidence            8888887   79999999999988765321100    0011343  6777777655788999999999987 89999998


Q ss_pred             CCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCe-EEEeeCCCcchhH
Q 009673          259 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG-MIFFKKDPVLGVE  335 (529)
Q Consensus       259 ~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG-~i~~~~~~~~~~~  335 (529)
                      +++||+  ..|+++|.++|+++|++||+|++|..|....+...   .++|++++|+||++ ||++| ++++++      +
T Consensus       173 ~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~---~~~d~~~~s~~K~~-g~~~G~~~~~~~------~  242 (406)
T 3cai_A          173 SASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRE---TDADVVTVNAHAWG-GPPIGAMVFRDP------S  242 (406)
T ss_dssp             SBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHH---HCCSEEEEEGGGGT-SCSCEEEEESCH------H
T ss_pred             CCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchh---cCCCEEEeehhhhc-CCCcCeEEEEeh------H
Confidence            888775  78999999999999999999999886644221110   04799999999986 67788 999987      6


Q ss_pred             HHhhhccccc--------CCCCCCChHHHHHHHHHHHHHhcCc--------------hHHHHHHHHHHHHHHHHHHHHhc
Q 009673          336 LESAINNAVF--------PGLQGGPHNHTIGGLAVCLKHAQSP--------------EFKVYQNKVVSNCRALASRLVEL  393 (529)
Q Consensus       336 l~~~i~~~~~--------p~~~g~p~~~~iaala~al~~~~~~--------------~~~~~~~~i~~~a~~l~~~L~~~  393 (529)
                      +.+++.....        ....++++...++++..+++.....              .+++..+++.++++++.+.|++.
T Consensus       243 ~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  322 (406)
T 3cai_A          243 VMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSL  322 (406)
T ss_dssp             HHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcC
Confidence            7766654321        0114667777777777777765432              25777888889999999999884


Q ss_pred             -CcEEecCC-CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCC------CCCCCCCCCCeEEEccCCCccCCCCHHH
Q 009673          394 -GYKLVSGG-SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSV------PGDKSALVPGGIRIGSPAMTTRGFSEKE  465 (529)
Q Consensus       394 -G~~v~~~g-t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~------Pg~~~~~~~~~iRig~~~~tt~g~~~~d  465 (529)
                       |+.+..+. ....++++.+.  +.+..++.+.|.++||.+..+..      .|.  +...+.+||++...+    +++|
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~--~~~~~~iRis~~~~~----t~e~  394 (406)
T 3cai_A          323 PLVMLIGRPEAQIPVVSFAVH--KVPADRVVQRLADNGILAIANTGSRVLDVLGV--NDVGGAVTVGLAHYS----TMAE  394 (406)
T ss_dssp             TTEEECCCCSSBCSEEEEEET--TBCHHHHHHHHHHTTEECEECCSCHHHHHHTT--TTTTCCEEEECCTTC----CHHH
T ss_pred             CCeEEcCCccccCCEEEEEEC--CcCHHHHHHHHHHCCcEEecCChHHHHHHcCC--CCCCCeEEEEeecCC----CHHH
Confidence             88876542 12234455543  35677888888889999865420      010  012468999987544    4899


Q ss_pred             HHHHHHHHHH
Q 009673          466 FVAIADFIHE  475 (529)
Q Consensus       466 ~~~la~~i~~  475 (529)
                      ++++++.|++
T Consensus       395 i~~~~~~l~~  404 (406)
T 3cai_A          395 VDQLVRALAS  404 (406)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHHH
Confidence            9999998864

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=99.95  E-value=1.5e-26  Score=239.99  Aligned_cols=332  Identities=13%  Similarity=0.087  Sum_probs=229.4

Q ss_pred             eeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673          105 LELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE  183 (529)
Q Consensus       105 i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~  183 (529)
                      +.|. ++...+++.|++++...+.+.        +++   .. .......++++++++|++++.   .+...+|++|+..
T Consensus        10 ~yl~~~~~~~~~~~v~~a~~~~~~~~--------~~~---~~-~~~~~~l~~~la~~~g~~~~~---v~~t~g~t~a~~~   74 (392)
T 2z9v_A           10 VITLTAGPVNAYPEVLRGLGRTVLYD--------YDP---AF-QLLYEKVVDKAQKAMRLSNKP---VILHGEPVLGLEA   74 (392)
T ss_dssp             SEECSSSCCCCCHHHHHHTTSCCCCT--------TSH---HH-HHHHHHHHHHHHHHTTCSSCC---EEESSCTHHHHHH
T ss_pred             ceeecCCCcCCCHHHHHHHhcccccc--------ccH---HH-HHHHHHHHHHHHHHhCCCCCE---EEEeCCchHHHHH
Confidence            4443 344568999999998765431        111   11 222234568899999997542   2334555699999


Q ss_pred             HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh-cCCcEEEEcCCCC
Q 009673          184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-FRPKLIIAGASAY  262 (529)
Q Consensus       184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~-~~pklIi~~~s~~  262 (529)
                      ++.++++|||+|+++++.|.++.   +.   ......|.  +++.+++++ ++.+|+++|++.+++ .++++|++++++|
T Consensus        75 ~~~~~~~~gd~Vl~~~~~~~~~~---~~---~~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~~v~~~~~~n  145 (392)
T 2z9v_A           75 AAASLISPDDVVLNLASGVYGKG---FG---YWAKRYSP--HLLEIEVPY-NEAIDPQAVADMLKAHPEITVVSVCHHDT  145 (392)
T ss_dssp             HHHHHCCTTCCEEEEESSHHHHH---HH---HHHHHHCS--CEEEEECCT-TSCCCHHHHHHHHHHCTTCCEEEEESEEG
T ss_pred             HHHHhcCCCCEEEEecCCcccHH---HH---HHHHHcCC--ceEEeeCCC-CCCCCHHHHHHHHhcCCCCcEEEEeccCC
Confidence            99999999999999998764431   10   01122344  556666663 467999999999953 2789999988887


Q ss_pred             CC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhh
Q 009673          263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA  339 (529)
Q Consensus       263 p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~  339 (529)
                      |+  ..|+++|.++|+++|+++|+|++|..|....+...   .++|++++|+||++.|+.| |++++++      ++.++
T Consensus       146 ptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~---~~~d~~~~s~sK~~~~~~g~G~l~~~~------~~~~~  216 (392)
T 2z9v_A          146 PSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPED---CKADIYVTGPNKCLGAPPGLTMMGVSE------RAWAK  216 (392)
T ss_dssp             GGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGG---GTCSEEEECSSSTTCCCSCCEEEEECH------HHHHH
T ss_pred             CCceeccHHHHHHHHHHcCCeEEEEcccccCCccccccc---ccceEEEecCcccccCCCceeEEEECH------HHHHH
Confidence            75  78999999999999999999999876643221110   0479999999999888777 9999987      56555


Q ss_pred             hcccc-------------------cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec-
Q 009673          340 INNAV-------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS-  399 (529)
Q Consensus       340 i~~~~-------------------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~-  399 (529)
                      +....                   .....++++...++++..+++.....++++..+++.++++++.+.|++.|+++.. 
T Consensus       217 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~  296 (392)
T 2z9v_A          217 MKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAMGLSVWAA  296 (392)
T ss_dssp             HHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSS
T ss_pred             hhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcCCeeccC
Confidence            43210                   0122456777777777777776543346788889999999999999888887765 


Q ss_pred             CC--CCCceEEEccCCCCCcHHHHHHhHhcC-CeEEcCCCCCCCCCCCCCCeEEEccCC-CccCCCCHHHHHHHHHHHHH
Q 009673          400 GG--SDNHLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVPGDKSALVPGGIRIGSPA-MTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       400 ~g--t~~~~~~v~~~~~~i~~~~~~~~L~~~-GI~v~~~~~Pg~~~~~~~~~iRig~~~-~tt~g~~~~d~~~la~~i~~  475 (529)
                      +.  ...+++++.+. .+.+..++.+.|.+. ||.+..+..     +..++++||++.. .    .+++|++++++.|++
T Consensus       297 ~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~~gi~v~~g~~-----~~~~~~lRi~~~~~~----~~~~~i~~~~~~l~~  366 (392)
T 2z9v_A          297 SDSIASPTTTAVRTP-DGVDEKALRQAARARYGVVFSSGRG-----ETLGKLTRIGHMGPT----AQPIYAIAALTALGG  366 (392)
T ss_dssp             SGGGBCTTEEEEECC-TTCCHHHHHHHHHHHHCEECEECCG-----GGTTTEEEEECCGGG----CSHHHHHHHHHHHHH
T ss_pred             CccccCCceEEEECC-CCCCHHHHHHHHHhcCCEEEecCCC-----CCCCCeEEEeCcccc----cCHHHHHHHHHHHHH
Confidence            21  12455566653 345677788888775 999854321     1235789999532 2    358999999999998


Q ss_pred             HHHH
Q 009673          476 GVEI  479 (529)
Q Consensus       476 ~~~~  479 (529)
                      +++.
T Consensus       367 ~~~~  370 (392)
T 2z9v_A          367 AMNA  370 (392)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8753

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=99.95  E-value=6.4e-26  Score=232.06  Aligned_cols=318  Identities=12%  Similarity=0.069  Sum_probs=230.1

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.|+|..++|+  +++.|++++...+...  .+||       .....++    ++++++++|++++    +|.+++|+ +
T Consensus        17 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y~-------~~~~~~l----~~~la~~~~~~~~----~i~~~~g~~~   79 (354)
T 3ly1_A           17 NPIRINFNENPLGMSPKAQAAARDAVVKA--NRYA-------KNEILML----GNKLAAHHQVEAP----SILLTAGSSE   79 (354)
T ss_dssp             SCEECSSCCCSSCCCHHHHHHHHHTGGGT--TSCC-------HHHHHHH----HHHHHHHTTSCGG----GEEEESHHHH
T ss_pred             ceEEccCCCCCCCCCHHHHHHHHHHHhhC--cCCC-------CCchHHH----HHHHHHHhCCChH----HEEEeCChHH
Confidence            56888888875  6899999998877532  2232       1223333    4788899998765    34456665 9


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh-cCCcEEEEc
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-FRPKLIIAG  258 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~-~~pklIi~~  258 (529)
                      |+..++.++++|||+|++.+|.|.++..        .+...|.  +++.++++ +++.+|+++|++.+++ .++++|+++
T Consensus        80 a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~v~l~  148 (354)
T 3ly1_A           80 GIRAAIEAYASLEAQLVIPELTYGDGEH--------FAKIAGM--KVTKVKML-DNWAFDIEGLKAAVAAYSGPSIVYLV  148 (354)
T ss_dssp             HHHHHHHHHCCTTCEEEEESSSCTHHHH--------HHHHTTC--EEEEECCC-TTSCCCHHHHHHHHHTCSSCEEEEEE
T ss_pred             HHHHHHHHHhCCCCeEEECCCCchHHHH--------HHHHcCC--EEEEecCC-CCCCCCHHHHHHHhccCCCCCEEEEe
Confidence            9999999999999999999988765421        2334454  67777776 3589999999999983 389999998


Q ss_pred             CCCCCC--CCCHHHHHHHHHH--hCCEEEEecccccccccccccCCCCC------cccEEEecccccc--cCCCCeEEEe
Q 009673          259 ASAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK------YCDVVTTTTHKSL--RGPRGGMIFF  326 (529)
Q Consensus       259 ~s~~p~--~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~~------~aDiv~~S~hK~l--~GprgG~i~~  326 (529)
                      +++||+  ..+.+++.+|++.  +|+++|+|++|. ++...+.....+.      ..+++++|+||++  +|+|.|++++
T Consensus       149 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~  227 (354)
T 3ly1_A          149 NPNNPTGTITPADVIEPWIASKPANTMFIVDEAYA-EFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVA  227 (354)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTG-GGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEEC
T ss_pred             CCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHH-HhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeec
Confidence            888886  6788888888877  999999999976 3333332222211      2348899999997  6788899999


Q ss_pred             eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673          327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL  406 (529)
Q Consensus       327 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~  406 (529)
                      ++      ++.+.+.....+   .+++....+++..+++..  ..+++..+++.++++.+.+.|.+.|+.+..+  ...+
T Consensus       228 ~~------~~~~~~~~~~~~---~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~~~~  294 (354)
T 3ly1_A          228 HP------TVIALMGRYVAG---EKINFSGVDAALASMNDS--AFITYSKKSNDVSRQILLKALEDLKLPYLPS--EGNF  294 (354)
T ss_dssp             CH------HHHHHHGGGTTC---SCCCHHHHHHHHHHTTCH--HHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC--CSSE
T ss_pred             CH------HHHHHHHHhcCC---CCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHHCCCeECCC--CceE
Confidence            77      787777665433   244555555555455422  3457788889999999999998888877643  2455


Q ss_pred             EEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          407 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       407 ~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +++++..   +..++.+.|.++||.+. +..++     .++++||++.       +++|++++++.|+++++
T Consensus       295 ~~~~~~~---~~~~~~~~l~~~gi~v~-g~~~~-----~~~~iRis~~-------~~~~i~~~~~~l~~~l~  350 (354)
T 3ly1_A          295 VFHQLVV---PLKDYQTHMADAGVLIG-RAFPP-----ADNWCRISLG-------TPQEMQWVADTMREFRK  350 (354)
T ss_dssp             EEEECSS---CHHHHHHHHHHTTEECC-CCCTT-----CTTEEEEECC-------CHHHHHHHHHHHHHHHH
T ss_pred             EEEECCC---CHHHHHHHHHHCCEEEe-ecCCC-----CCCEEEEEcC-------CHHHHHHHHHHHHHHHH
Confidence            6777753   56788888888999986 43222     3678999953       47999999999998876

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=99.95  E-value=4.5e-26  Score=240.17  Aligned_cols=334  Identities=17%  Similarity=0.161  Sum_probs=234.9

Q ss_pred             ceeEecCCC---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHH
Q 009673          104 SLELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP  179 (529)
Q Consensus       104 ~i~L~asen---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~  179 (529)
                      .|++..+++   ..++.|++++...+.. |..++++.++..|. +...+++    +++++++|.+.     .+.++||++
T Consensus        66 ~id~~~~~~lg~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~G~~~~~~~l~----~~la~~~g~~~-----~i~~~sGs~  135 (427)
T 2w8t_A           66 TILLGTYNYMGMTFDPDVIAAGKEALEK-FGSGTCGSRMLNGTFHDHMEVE----QALRDFYGTTG-----AIVFSTGYM  135 (427)
T ss_dssp             EEECSCCCTTCGGGCHHHHHHHHHHHHH-HCSCCCSCTTTTCCCHHHHHHH----HHHHHHHTCSE-----EEEESCHHH
T ss_pred             EEEEECcccccCCCCHHHHHHHHHHHHH-hCCCCcccccccCCcHHHHHHH----HHHHHHhCCCc-----eEEecCcHH
Confidence            456666643   2679999999887754 44456665555553 4445554    77888888862     466799999


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc---CCcEEE
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLII  256 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~---~pklIi  256 (529)
                      ||..++.+++++||.|++..+.|++...        .+...|.  +++.++      .+|+++|++.+++.   ++++|+
T Consensus       136 a~~~al~~l~~~gd~vl~~~~~h~~~~~--------~~~~~g~--~~~~~~------~~d~~~le~~l~~~~~~~~~~v~  199 (427)
T 2w8t_A          136 ANLGIISTLAGKGEYVILDADSHASIYD--------GCQQGNA--EIVRFR------HNSVEDLDKRLGRLPKEPAKLVV  199 (427)
T ss_dssp             HHHHHHHHHSCTTCEEEEETTCCHHHHH--------HHHHSCS--EEEEEC------TTCHHHHHHHHHTSCSSSCEEEE
T ss_pred             HHHHHHHHhcCCCCEEEECCcccHHHHH--------HHHHcCC--eeEEeC------CCCHHHHHHHHHhccCCCCeEEE
Confidence            9999999999999999999988765431        2334454  555554      36899999999764   688999


Q ss_pred             EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccc-ccc-C--CCC-CcccEEEecccccccCCCCeEEEeeCC
Q 009673          257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA-SVV-A--DPF-KYCDVVTTTTHKSLRGPRGGMIFFKKD  329 (529)
Q Consensus       257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~~~-~--~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~  329 (529)
                      ++.++|++  ..|+++|+++|++||++||+|++|..|.... +.. .  ..+ +.+|++++|+||++ |++||++++++ 
T Consensus       200 ~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~-g~~gG~v~~~~-  277 (427)
T 2w8t_A          200 LEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSV-GTVGGFVVSNH-  277 (427)
T ss_dssp             EESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTT-CSCCEEEEECC-
T ss_pred             EcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhh-ccCCCEEEeCH-
Confidence            98776665  7789999999999999999999988765531 100 0  111 25799999999998 58889999987 


Q ss_pred             CcchhHHHhhhcccccCC-CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEE
Q 009673          330 PVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL  408 (529)
Q Consensus       330 ~~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~  408 (529)
                           ++.+.+.....+. ..++++...++++..+++.+.  ..++..+++.++++++.+.|++.|+++..+....++++
T Consensus       278 -----~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~  350 (427)
T 2w8t_A          278 -----PKFEAVRLACRPYIFTASLPPSVVATATTSIRKLM--TAHEKRERLWSNARALHGGLKAMGFRLGTETCDSAIVA  350 (427)
T ss_dssp             -----TTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHHHHHHTCEESCSSCCSSEEE
T ss_pred             -----HHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCCCEEE
Confidence                 5655554331111 123445556666656777653  24677888999999999999988998763221345667


Q ss_pred             EccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          409 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +.+.. +.+...+.+.|.+.||.+.....|+.  +...+.+||+++..    ++++|++++++.|+++++.
T Consensus       351 ~~~~~-~~~~~~l~~~L~~~Gi~v~~~~~~~~--~~~~~~lRi~~~~~----~t~e~i~~~~~~l~~~l~~  414 (427)
T 2w8t_A          351 VMLED-QEQAAMMWQALLDGGLYVNMARPPAT--PAGTFLLRCSICAE----HTPAQIQTVLGMFQAAGRA  414 (427)
T ss_dssp             EEESS-HHHHHHHHHHHHHTTEECEEECTTTS--CTTCEEEEEECCTT----CCHHHHHHHHHHHHHHHHH
T ss_pred             EEECC-HHHHHHHHHHHHHCCeEEeeeCCCCC--CCCCeEEEEEeCCC----CCHHHHHHHHHHHHHHHHH
Confidence            76642 22345677778778999876543332  12346899997653    4589999999999998764

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=99.95  E-value=2e-26  Score=238.68  Aligned_cols=348  Identities=14%  Similarity=0.116  Sum_probs=237.1

Q ss_pred             ChHHHHHHHHHHHHhhcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC--
Q 009673           87 DPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--  162 (529)
Q Consensus        87 d~~~~~~~~~e~~~~~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g--  162 (529)
                      +..+|+...++. ...+.|+|..+++.  +++.|++++...+.+.. .+|+.     +   ..++++.+++++++.+|  
T Consensus        18 g~~~~d~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~-----~---~~~~~~~l~~~l~~~~g~~   87 (391)
T 4dq6_A           18 FSSKWSEMEKKY-GTNDLLPMWVADMDFKAAPCIIDSLKNRLEQEI-YGYTT-----R---PDSYNESIVNWLYRRHNWK   87 (391)
T ss_dssp             TBHHHHCHHHHH-SCSCSEECCSSSCSSCCCHHHHHHHHHHHTTCC-CCCBC-----C---CHHHHHHHHHHHHHHHCCC
T ss_pred             Cceeeeeccccc-CCCCceeccccCCCCCCCHHHHHHHHHHHhCCC-CCCCC-----C---CHHHHHHHHHHHHHHhCCC
Confidence            344555433321 12466888877763  57999999988775421 12221     1   24566667789999999  


Q ss_pred             CCCCCCceeeecCCh-HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC-C--CCCCC
Q 009673          163 LDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-E--STGLV  238 (529)
Q Consensus       163 ~~~~~~~~~V~~~sG-s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~-~--~~~~i  238 (529)
                      ++++    +|.+++| ++|+..++.++++|||+|++++|.|.++..        .+...|.  +++.++++ .  .++.+
T Consensus        88 ~~~~----~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~~  153 (391)
T 4dq6_A           88 IKSE----WLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNS--------VVKNNNR--ELIISPLQKLENGNYIM  153 (391)
T ss_dssp             CCGG----GEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHH--------HHHHTTC--EEEECCCEECTTSCEEC
T ss_pred             CcHH----HeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHH--------HHHHcCC--eEEeeeeeecCCCceEe
Confidence            4444    3444555 599999999999999999999988765421        2334454  66777765 2  23569


Q ss_pred             CHHHHHHHhhhcCCcEEEEcCCCCCC--C---CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cc-----c
Q 009673          239 DYDMLEKTAILFRPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YC-----D  306 (529)
Q Consensus       239 D~d~le~~i~~~~pklIi~~~s~~p~--~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~a-----D  306 (529)
                      |+++|++.+++  +++|+++.++||+  .   .++++|+++|++||+++|+|++|.. +...+....++.  ..     .
T Consensus       154 d~~~l~~~l~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~~  230 (391)
T 4dq6_A          154 DYEDIENKIKD--VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSD-IILKKHKHIPMASISKEFEKNT  230 (391)
T ss_dssp             CHHHHHHHCTT--EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTT-CBCTTCCCCCGGGSCHHHHHTE
T ss_pred             eHHHHHHHhhc--CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccc-cccCCCCccCHHHcCccccCcE
Confidence            99999999977  8999988888886  3   4688999999999999999999754 333332222222  12     2


Q ss_pred             EEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673          307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR  384 (529)
Q Consensus       307 iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~  384 (529)
                      +++.|+||++  +|.|.|+++++++     ++.+.+.........++++....+++..+++.. ....++..+++.++++
T Consensus       231 i~~~s~sK~~g~~G~r~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~  304 (391)
T 4dq6_A          231 ITCMAPTKTFNIAGLQSSYVVLPDE-----KDYKLLDDAFTRIDIKRNNCFSLVATEASYNNG-ESWLESFLEYLESNID  304 (391)
T ss_dssp             EEEECSHHHHTCGGGCCEEEECCSH-----HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHH
T ss_pred             EEEEechhhccCcccceEEEEeCCH-----HHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhch-HHHHHHHHHHHHHHHH
Confidence            8899999987  6788899998863     566665543222223445555555555566652 2235777888999999


Q ss_pred             HHHHHHHh--cCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcC-CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCC
Q 009673          385 ALASRLVE--LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF  461 (529)
Q Consensus       385 ~l~~~L~~--~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~-GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~  461 (529)
                      .+.+.|++  .|+.+..+ ..+++.|+++...+.+..++.+.|.+. ||.+..+...+   ...++.+||++.      .
T Consensus       305 ~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRis~~------~  374 (391)
T 4dq6_A          305 FAIKYINENMPKLKVRKP-EGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFG---IGGSGYQRINLA------C  374 (391)
T ss_dssp             HHHHHHHHHCTTSEECCC-SBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGC---TTCTTEEEEECC------S
T ss_pred             HHHHHHHhhCCCCEecCC-CccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhC---CCCCCeEEEEEc------C
Confidence            99999987  38887754 234556677764356777887777666 99986532221   223578999965      3


Q ss_pred             CHHHHHHHHHHHHHHH
Q 009673          462 SEKEFVAIADFIHEGV  477 (529)
Q Consensus       462 ~~~d~~~la~~i~~~~  477 (529)
                      ++++++++++.|.+++
T Consensus       375 ~~~~i~~~l~~l~~~l  390 (391)
T 4dq6_A          375 PRSMLEEALIRIKNAI  390 (391)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHh
Confidence            5799999999998765

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=99.95  E-value=3e-26  Score=238.01  Aligned_cols=338  Identities=12%  Similarity=0.071  Sum_probs=225.0

Q ss_pred             hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673          102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-  178 (529)
Q Consensus       102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-  178 (529)
                      ++.|+|..+++.  +++.|++++...+.+.. .+|+.      .....++++...+++.+.+|.+.+.  .+|.+++|+ 
T Consensus        31 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~y~~------~~g~~~lr~~ia~~~~~~~g~~~~~--~~v~~t~g~~  101 (391)
T 3h14_A           31 RRIIHMEVGQPGTGAPRGAVEALAKSLETDA-LGYTV------ALGLPALRQRIARLYGEWYGVDLDP--GRVVITPGSS  101 (391)
T ss_dssp             CCCEECCCSSCSSCSCHHHHHHHHHHHC-----------------CCHHHHHHHHHHHHHHHCCCCCG--GGEEEESSHH
T ss_pred             CCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCChHHHHHHHHHHHHHHhCCCCCH--HHEEEecChH
Confidence            467899888764  47899999988775422 23322      1113466666667788888854321  134445554 


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEE
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA  257 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~  257 (529)
                      +|+..++.++++|||+|++.+|.|.++.        ..+...|.  +++.++++++ ++.+|++++++.    ++++|++
T Consensus       102 ~al~~~~~~l~~~gd~vl~~~p~~~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~----~~~~v~i  167 (391)
T 3h14_A          102 GGFLLAFTALFDSGDRVGIGAPGYPSYR--------QILRALGL--VPVDLPTAPENRLQPVPADFAGL----DLAGLMV  167 (391)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESCCHHHH--------HHHHHTTC--EEEEEECCGGGTTSCCHHHHTTS----CCSEEEE
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCccHH--------HHHHHcCC--EEEEeecCcccCCCCCHHHHHhc----CCeEEEE
Confidence            9999999999999999999998775542        12334554  6666666643 367899999776    7899999


Q ss_pred             cCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccc--cCCCCeEEEeeC
Q 009673          258 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKK  328 (529)
Q Consensus       258 ~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l--~GprgG~i~~~~  328 (529)
                      +.++||+  ..+   +++|.++|++||+++|+|++|. ++...+.......  ..+++++|+||++  +|+|.|++++++
T Consensus       168 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~  246 (391)
T 3h14_A          168 ASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYH-GIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPE  246 (391)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT-TCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCG
T ss_pred             CCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcch-hcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeCH
Confidence            8888886  444   8899999999999999999965 3333332111111  3458999999997  678889999987


Q ss_pred             CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEE
Q 009673          329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL  408 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~  408 (529)
                            ++.+.+......... +++....+++..+++  ....+++..+++.++++.+.+.|++.|+..+.....+++.+
T Consensus       247 ------~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~  317 (391)
T 3h14_A          247 ------DQVRVVERIAQNMFI-CAPHASQVAALAALD--CDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVY  317 (391)
T ss_dssp             ------GGHHHHHHHHHHTTC-CCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEE
T ss_pred             ------HHHHHHHHHHhhhcc-CCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEE
Confidence                  566655443222222 333334333333454  22345778888999999999999887766543333356677


Q ss_pred             EccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          409 VDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       409 v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      +++...+.+..++.+.| +++||.+..+..++.  +..+++|||++..      +++|++++++.|.++++..
T Consensus       318 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~~~~iRis~~~------~~~~i~~~l~~l~~~~~~~  382 (391)
T 3h14_A          318 ADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDP--ERGAGTLRFSYAR------ATADIEEGLDRLEAFMQAR  382 (391)
T ss_dssp             EECTTTCSCHHHHHHHHHHHHCEECEEGGGTCT--TTGGGEEEEECCS------CHHHHHHHHHHHHHHHHHC
T ss_pred             EecCccCCCHHHHHHHHHHHCCEEEcCchhhCC--CCCCCeEEEEecC------CHHHHHHHHHHHHHHHHHh
Confidence            77765456777776664 557999965432221  1235789999653      5799999999999888754

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=99.95  E-value=2.2e-26  Score=239.68  Aligned_cols=333  Identities=18%  Similarity=0.202  Sum_probs=232.1

Q ss_pred             cceeEecCCCC---CcHHHHHHHhhhhhccCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673          103 KSLELIASENF---TSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS  178 (529)
Q Consensus       103 ~~i~L~asen~---~~~~V~eal~~~l~~~y~~G~p~~r~~~g-~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs  178 (529)
                      ..|++..+...   .++.+++++...+. +|..++.+.+|..| .+..++++    +.+++++|++ +    .|.+++|+
T Consensus        46 ~~id~~~~~~~g~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~-~----~i~~~sGs  115 (401)
T 1fc4_A           46 HVINFCANNYLGLANHPDLIAAAKAGMD-SHGFGMASVRFICGTQDSHKELE----QKLAAFLGME-D----AILYSSCF  115 (401)
T ss_dssp             EEEECCCSCTTSCTTCHHHHHHHHHHHH-HHCSCCCSCHHHHCCBHHHHHHH----HHHHHHHTCS-E----EEEESCHH
T ss_pred             cEEEeeccCcccccCCHHHHHHHHHHHH-HhCCCCCCCCcccCCcHHHHHHH----HHHHHHhCCC-c----EEEeCChH
Confidence            34676666332   38999999988774 34444444344322 33344444    7788889987 2    46679999


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCc
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPK  253 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-----~pk  253 (529)
                      +|+..++.++++|||+|++.++.|++++.        .+...|.  +++.++      .+|+++|++.+++.     +++
T Consensus       116 ~a~~~~~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~~~~~~  179 (401)
T 1fc4_A          116 DANGGLFETLLGAEDAIISDALNHASIID--------GVRLCKA--KRYRYA------NNDMQELEARLKEAREAGARHV  179 (401)
T ss_dssp             HHHHTTHHHHCCTTCEEEEETTCCHHHHH--------HHHTSCS--EEEEEC------TTCHHHHHHHHHHHHHTTCSSE
T ss_pred             HHHHHHHHHHcCCCCEEEEcchhHHHHHH--------HHHHcCC--ceEEEC------CCCHHHHHHHHHHhhccCCCce
Confidence            99999999999999999999988765431        2334554  555554      35889999988753     689


Q ss_pred             EEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccccc-cccc-C--CCC-CcccEEEecccccccCCCCeEEEe
Q 009673          254 LIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVA-ASVV-A--DPF-KYCDVVTTTTHKSLRGPRGGMIFF  326 (529)
Q Consensus       254 lIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~-~~~~-~--~~~-~~aDiv~~S~hK~l~GprgG~i~~  326 (529)
                      +|++++++||+  ..++++|.++|+++|+++|+|++|..|+.. .+.. +  ..+ .+.|++++|+||++.|+.||++++
T Consensus       180 ~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~gG~~~~  259 (401)
T 1fc4_A          180 LIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAA  259 (401)
T ss_dssp             EEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSCEEEEE
T ss_pred             EEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCCEEEEc
Confidence            99998888776  778999999999999999999998767753 2211 1  111 257999999999996666999999


Q ss_pred             eCCCcchhHHHhhhcccccCC-CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc
Q 009673          327 KKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH  405 (529)
Q Consensus       327 ~~~~~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~  405 (529)
                      ++      ++.+.+.....+. ..++++....+++..+++....  .++..+++.++++++.+.|++.|+++..  ...+
T Consensus       260 ~~------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~  329 (401)
T 1fc4_A          260 RK------EVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEA--GSELRDRLWANARQFREQMSAAGFTLAG--ADHA  329 (401)
T ss_dssp             CH------HHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHTTCCBCC--SSSS
T ss_pred             CH------HHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCcccC--CCCC
Confidence            87      6766665432111 1234455555555567776532  3677888999999999999988888763  3456


Q ss_pred             eEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          406 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       406 ~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ++++++.. +.+..++.+.|.+.||.+.....++.  +...+.+||+++..    .+++|++++++.|+++++
T Consensus       330 ~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~~~~~~--~~~~~~iRi~~~~~----~~~~~i~~~~~~l~~~~~  395 (401)
T 1fc4_A          330 IIPVMLGD-AVVAQKFARELQKEGIYVTGFFYPVV--PKGQARIRTQMSAA----HTPEQITRAVEAFTRIGK  395 (401)
T ss_dssp             EEEEEEEC-HHHHHHHHHHHHHTTEECCEECTTSS--CTTCEEEEEECCTT----CCHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCC-hHHHHHHHHHHHHCCcEEeeecCCCC--CCCCceEEEEeCCC----CCHHHHHHHHHHHHHHHH
Confidence            67777642 23456677888888999865443321  11246799997643    358999999999998875

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=99.95  E-value=8.4e-27  Score=241.24  Aligned_cols=337  Identities=15%  Similarity=0.094  Sum_probs=230.2

Q ss_pred             cceeEecCC-CCCcHHHHHHHhhhhhccCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHH
Q 009673          103 KSLELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA  180 (529)
Q Consensus       103 ~~i~L~ase-n~~~~~V~eal~~~l~~~y~~G~p~~-r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A  180 (529)
                      +.+.|..+. .+.|+.|++++...+.+.. ...+.. +.|.  .+. ......++.+++++|+++++   .+...+|++|
T Consensus        16 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~-~~~~~~~~~y~--~~~-~~~~~l~~~la~~~g~~~~~---v~~~~g~t~a   88 (390)
T 1elu_A           16 NKTYFNFGGQGILPTVALEAITAMYGYLQ-ENGPFSIAANQ--HIQ-QLIAQLRQALAETFNVDPNT---ITITDNVTTG   88 (390)
T ss_dssp             TSEECCTTTCCCCCHHHHHHHHHHHHHHH-HHCSSSHHHHH--HHH-HHHHHHHHHHHHHTTSCGGG---EEEESSHHHH
T ss_pred             CeEEecCCccCCCCHHHHHHHHHHHHHHh-ccCCcchhhHH--HHH-HHHHHHHHHHHHHcCCCHHH---EEEeCChHHH
Confidence            346665443 3567899999988775432 111110 0111  111 22234558889999987642   2334566699


Q ss_pred             HHHHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          181 NFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       181 ~~~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      +..++.++ ++|||+|+++++.|.++.....    ......|.  +++.+++++ +++.+|+++|++.+++ ++++|+++
T Consensus        89 ~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~----~~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~  161 (390)
T 1elu_A           89 CDIVLWGLDWHQGDEILLTDCEHPGIIAIVQ----AIAARFGI--TYRFFPVAATLNQGDAAAVLANHLGP-KTRLVILS  161 (390)
T ss_dssp             HHHHHHHSCCCTTCEEEEETTCCHHHHHHHH----HHHHHHCC--EEEEECCGGGSSSSCHHHHHHTTCCT-TEEEEEEE
T ss_pred             HHHHHhCCCCCCCCEEEEecCcccHHHHHHH----HHHHHhCc--EEEEEcCCCCCCccchHHHHHHhcCC-CceEEEEe
Confidence            99999999 8999999999998765421100    00122344  566666643 3578999999999987 89999999


Q ss_pred             CCCCCC--CCCHHHHHHHHH----HhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCc
Q 009673          259 ASAYPR--DFDYPRMRQIAD----AVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPV  331 (529)
Q Consensus       259 ~s~~p~--~~d~~~i~~ia~----~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~  331 (529)
                      +++||+  ..|+++|.++|+    ++|+++|+|++|..|....+...   .+.|++++|+||++.|+.| |++++++   
T Consensus       162 ~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~---~~~d~~~~s~~K~~~~~~g~G~~~~~~---  235 (390)
T 1elu_A          162 HLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSR---LEVDYYAFTGHKWFAGPAGVGGLYIHG---  235 (390)
T ss_dssp             SBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTT---SCCSEEEEESSSTTCCCTTCEEEEECT---
T ss_pred             ccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhh---cCCCEEEccccccccCCCceEEEEECH---
Confidence            888876  789999999999    99999999999887644222110   1579999999997766666 9999987   


Q ss_pred             chhHHHhhhccccc---------------------CCCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHH
Q 009673          332 LGVELESAINNAVF---------------------PGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASR  389 (529)
Q Consensus       332 ~~~~l~~~i~~~~~---------------------p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~  389 (529)
                         ++.+++.....                     ....++++...++++..+++.+...+ +++..+++.++++++.+.
T Consensus       236 ---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~  312 (390)
T 1elu_A          236 ---DCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRG  312 (390)
T ss_dssp             ---TTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred             ---HhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence               45555443211                     11235666666666666776554334 678889999999999999


Q ss_pred             HHhc-CcEEecC-CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673          390 LVEL-GYKLVSG-GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV  467 (529)
Q Consensus       390 L~~~-G~~v~~~-gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~  467 (529)
                      |++. |++++.+ .....++++++. .+.+..++.+.|.++||.+..+    .    .++++||+++..    .+++|++
T Consensus       313 L~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~~----~----~~~~iRis~~~~----~~~~~i~  379 (390)
T 1elu_A          313 LNQLPHVHCLATSAPQAGLVSFTVD-SPLGHRAIVQKLEEQRIYLRTI----A----DPDCIRACCHYI----TDEEEIN  379 (390)
T ss_dssp             HHHSTTEEESCSSCCSSSEEEEEEC-SSSCHHHHHHHHHHTTEECEEE----T----TTTEEEEECCTT----CCHHHHH
T ss_pred             HHhcCCcEEecCccccccEEEEEcC-CCCCHHHHHHHHHHCCEEEEec----C----CCCeEEEecccC----CCHHHHH
Confidence            9985 8888753 123456666664 3456778888888899998543    2    257899997543    3589999


Q ss_pred             HHHHHHHH
Q 009673          468 AIADFIHE  475 (529)
Q Consensus       468 ~la~~i~~  475 (529)
                      ++++.|++
T Consensus       380 ~~~~~l~~  387 (390)
T 1elu_A          380 HLLARLAD  387 (390)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHHHh
Confidence            99988864

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=99.95  E-value=4.6e-26  Score=234.44  Aligned_cols=320  Identities=14%  Similarity=0.096  Sum_probs=226.8

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC-CCCCCceeeecCChH-
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGS-  178 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~-~~~~~~~~V~~~sGs-  178 (529)
                      +.|+|..++|+  +++.|++++...+.+....+|+.       ....+++    +++++++|+ +++    +|.+++|+ 
T Consensus        31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-------~~~~~l~----~~la~~~g~~~~~----~i~~~~g~t   95 (367)
T 3euc_A           31 GLVKLDAMENPYRLPPALRSELAARLGEVALNRYPV-------PSSEALR----AKLKEVMQVPAGM----EVLLGNGSD   95 (367)
T ss_dssp             TCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCC-------CCHHHHH----HHHHHHHTCCTTC----EEEEEEHHH
T ss_pred             CeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-------CcHHHHH----HHHHHHhCCCCcc----eEEEcCCHH
Confidence            56889888875  58999999988776422223332       1233444    778888998 443    45556665 


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      +|+..++.++++|||+|++.++.|.++..        .+...|.  +++.+++++ ++.+|+++|++.+++.++++|+++
T Consensus        96 ~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~v~~~  164 (367)
T 3euc_A           96 EIISMLALAAARPGAKVMAPVPGFVMYAM--------SAQFAGL--EFVGVPLRA-DFTLDRGAMLAAMAEHQPAIVYLA  164 (367)
T ss_dssp             HHHHHHHHHTCCTTCEEEEEESCSCCSCH--------HHHTTTC--EEEEEECCT-TSCCCHHHHHHHHHHHCCSEEEEE
T ss_pred             HHHHHHHHHHcCCCCEEEEcCCCHHHHHH--------HHHHcCC--eEEEecCCC-CCCCCHHHHHHHhhccCCCEEEEc
Confidence            99999999999999999999988765421        2334554  667777763 678999999999987789999998


Q ss_pred             CCCCCC--CC---CHHHHHHHHHHh--CCEEEEecccccccccccccCCCCC--cccEEEecccccc-cCCCCeEEEeeC
Q 009673          259 ASAYPR--DF---DYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL-RGPRGGMIFFKK  328 (529)
Q Consensus       259 ~s~~p~--~~---d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l-~GprgG~i~~~~  328 (529)
                      +++||+  ..   ++++|.++|++|  |+++|+|++|.. +...+..+ .+.  ..+++++|+||+. +|.|.|++++++
T Consensus       165 ~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~-~~~~~~~~-~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~  242 (367)
T 3euc_A          165 YPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQP-FAQESWMS-RLTDFGNLLVMRTVSKLGLAGIRLGYVAGDP  242 (367)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCC-SSSCCSGG-GGGTCTTEEEEEECCCTTSCSCCEEEEEECH
T ss_pred             CCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchh-hcccchHH-HHhhCCCEEEEecchhhcccccCceeeeeCH
Confidence            888886  33   577888889999  999999999653 32221111 111  3458899999983 567779999977


Q ss_pred             CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceE
Q 009673          329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLV  407 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~  407 (529)
                            ++.+.+.....++   +++....+++..+++.  ...+++..+++.++++.+.+.|++. |+.+..+  ...++
T Consensus       243 ------~~~~~~~~~~~~~---~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~--~~~~~  309 (367)
T 3euc_A          243 ------QWLEQLDKVRPPY---NVNVLTEATALFALEH--VAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPS--AANFL  309 (367)
T ss_dssp             ------HHHHHHGGGCCSS---CCCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHTSTTCEECCC--SSSEE
T ss_pred             ------HHHHHHHHhCCCC---CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCC--CCeEE
Confidence                  7777776544322   2344455555555654  2335788888999999999999886 8886543  24566


Q ss_pred             EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      ++++.    +..++.+.|.++||.+..+...   .+..++++||++.       +++|++++++.|++++
T Consensus       310 ~~~~~----~~~~l~~~l~~~gi~v~~~~~~---~~~~~~~iRis~~-------~~~~i~~~~~~l~~~l  365 (367)
T 3euc_A          310 LARVP----DAAQTFDRLLARKVLIKNVSKM---HPLLANCLRVTVS-------TPEENAQFLEAFAASL  365 (367)
T ss_dssp             EEECS----CHHHHHHHHHTTTEECEECGGG---CGGGTTEEEEECC-------CHHHHHHHHHHHHHHT
T ss_pred             EEECC----CHHHHHHHHHHCCeEEEECCcc---CCCCCCEEEEecC-------CHHHHHHHHHHHHHHh
Confidence            77764    5678888899999998643211   1224578999953       5899999999998765

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=99.95  E-value=1.8e-25  Score=240.67  Aligned_cols=340  Identities=13%  Similarity=0.034  Sum_probs=237.4

Q ss_pred             CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC--CCCCceeeecCChHHHHHHHHHhhc
Q 009673          112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGSPANFEVYTAIL  189 (529)
Q Consensus       112 n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~--~~~~~~~V~~~sGs~A~~~~l~all  189 (529)
                      .++++.+.+++...+...+.  +     +...+...++|+.+++++++++|++  +++...-+.+++|++||..++.++.
T Consensus        66 ~~~~~~v~~~l~~~~~~~~~--~-----~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~  138 (502)
T 3hbx_A           66 TWMEPECDKLIMSSINKNYV--D-----MDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFK  138 (502)
T ss_dssp             CCCCHHHHHHHHHTTTCBTT--C-----TTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhccCCC--C-----hhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHH
Confidence            45689999999887754432  1     1123446789989999999999998  4443333445677799999888886


Q ss_pred             CC--------CC-----EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673          190 KP--------HD-----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII  256 (529)
Q Consensus       190 ~p--------GD-----~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi  256 (529)
                      ++        ||     +|++.++.|.++.        +.+...|.  +++.++++++++.+|+++|++.+++ +|++|+
T Consensus       139 ~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~--------~~~~~~G~--~~~~v~~~~~~~~~d~~~l~~~i~~-~t~~v~  207 (502)
T 3hbx_A          139 RKWQNKRKAEGKPVDKPNIVTGANVQVCWE--------KFARYFEV--ELKEVKLSEGYYVMDPQQAVDMVDE-NTICVA  207 (502)
T ss_dssp             HHHHHHHHHTTCCCSCCEEEEETTCCHHHH--------HHHHHTTC--EEEEECCBTTBCSCCHHHHHHHCCT-TEEEEE
T ss_pred             HHHhHHHHhcCCCCCCcEEEEcCCchHHHH--------HHHHHcCc--eeEEEecCCCcCcCCHHHHHHHHhh-CCEEEE
Confidence            65        87     8999887664321        23445565  5666667654589999999999988 889888


Q ss_pred             EcCCCCCC--CCCHHHHHHHHHHh------CCEEEEeccccccccc--ccccCCCC--CcccEEEecccccccCCCC-eE
Q 009673          257 AGASAYPR--DFDYPRMRQIADAV------GALLMMDMAHISGLVA--ASVVADPF--KYCDVVTTTTHKSLRGPRG-GM  323 (529)
Q Consensus       257 ~~~s~~p~--~~d~~~i~~ia~~~------g~~livD~ah~~Gli~--~~~~~~~~--~~aDiv~~S~hK~l~Gprg-G~  323 (529)
                      ++.++|++  ..|+++|.++|+++      |++|++|+||..+..+  .+..+..+  .++|++++++||++.+|.| |+
T Consensus       208 ~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G~  287 (502)
T 3hbx_A          208 AILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGW  287 (502)
T ss_dssp             EEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEE
T ss_pred             EecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCeEE
Confidence            88776665  78999999999999      9999999998654321  11112222  3799999999999977666 88


Q ss_pred             EEeeCCCcchhHHH-hhhcc--ccc------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC
Q 009673          324 IFFKKDPVLGVELE-SAINN--AVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG  394 (529)
Q Consensus       324 i~~~~~~~~~~~l~-~~i~~--~~~------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G  394 (529)
                      ++++++     ++. +.+..  ...      ..+.+++....++++..++..+...++.++.++..+++++|.+.|.+.|
T Consensus       288 ~~~~~~-----~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~  362 (502)
T 3hbx_A          288 VIWRNK-----EDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTE  362 (502)
T ss_dssp             EEESSG-----GGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EEEeCH-----HHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            888763     222 11111  000      1112333344556666677665556788889999999999999999865


Q ss_pred             -cEEecCCCCCceEEEccCC-CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673          395 -YKLVSGGSDNHLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF  472 (529)
Q Consensus       395 -~~v~~~gt~~~~~~v~~~~-~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~  472 (529)
                       ++++.+....+++.+.+.. .+++...+.+.|.+.||.+.....|..  ......+||++...    .+++|++.+++.
T Consensus       363 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~p~~--~~~~~~lRisv~~~----~t~edid~li~~  436 (502)
T 3hbx_A          363 RFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPN--AQHITVLRVVIRED----FSRTLAERLVID  436 (502)
T ss_dssp             CEEECSCSSSSSEEEEEESSCSSCCHHHHHHHHHTTTCBCCEEECCTT--CTTCEEEEEECCTT----CCHHHHHHHHHH
T ss_pred             CEEEEeCCCCceEEEEEecCCCcCCHHHHHHHHHhCCcEEeeccCCcc--cCCceEEEEEeCCC----CCHHHHHHHHHH
Confidence             9888652344566666543 235667889999999998754333322  12346799997654    458999999999


Q ss_pred             HHHHHHHH
Q 009673          473 IHEGVEIT  480 (529)
Q Consensus       473 i~~~~~~~  480 (529)
                      |++++...
T Consensus       437 L~~~l~~l  444 (502)
T 3hbx_A          437 IEKVMREL  444 (502)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99988754

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=99.95  E-value=5.6e-26  Score=234.40  Aligned_cols=336  Identities=14%  Similarity=0.150  Sum_probs=228.8

Q ss_pred             CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc--
Q 009673          112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--  189 (529)
Q Consensus       112 n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--  189 (529)
                      .++++.|++++...+.+.+  +.+...|..+... .......++++++++|+++++   .+.+.+|++|+..++.++.  
T Consensus        10 ~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~l~~~la~~~g~~~~~---v~~~~g~t~a~~~~~~~l~~~   83 (382)
T 4eb5_A           10 KPVDERILEAMLPYMTESF--GNPSSVHSYGFKA-REAVQEAREKVAKLVNGGGGT---VVFTSGATEANNLAIIGYAMR   83 (382)
T ss_dssp             CCCCHHHHHHHHHHHHTSC--CCTTCSSHHHHHH-HHHHHHHHHHHHHHHTCTTEE---EEEESSHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHhcc--CCCCCCcHHHHHH-HHHHHHHHHHHHHHhCCCCCe---EEEcCchHHHHHHHHHHHHhh
Confidence            4789999999998876533  3344333222222 233334668999999997642   2334455699999999987  


Q ss_pred             --CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--C
Q 009673          190 --KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--D  265 (529)
Q Consensus       190 --~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~  265 (529)
                        +|||+|+++++.|.+.....     ..+...|.  +++.++++ +++.+|+++|++.+++ ++++|++++++||+  .
T Consensus        84 ~~~~gd~Vl~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~  154 (382)
T 4eb5_A           84 NARKGKHILVSAVEHMSVINPA-----KFLQKQGF--EVEYIPVG-KYGEVDVSFIDQKLRD-DTILVSVQHANNEIGTI  154 (382)
T ss_dssp             HGGGCCEEEEETTCCHHHHHHH-----HHHTTTTC--EEEEECBC-TTSCBCHHHHHHHCCT-TEEEEECCSBCTTTCBB
T ss_pred             ccCCCCEEEECCCcchHHHHHH-----HHHHhCCc--EEEEeccC-CCCccCHHHHHHHhcC-CCeEEEEeccCCCcccc
Confidence              89999999998876542211     01112354  67777776 4678999999999987 78999988888876  7


Q ss_pred             CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcc
Q 009673          266 FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN  342 (529)
Q Consensus       266 ~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~  342 (529)
                      .|+++|.++|+++|++ |+|++|..|....     .+.  ++|++++|+||+ .||.| |+++++++.    .+...+..
T Consensus       155 ~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~-----~~~~~~~di~~~s~sK~-~g~~g~G~~~~~~~~----~l~~~~~~  223 (382)
T 4eb5_A          155 QPVEEISEVLAGKAAL-HIDATASVGQIEV-----DVEKIGADMLTISSNDI-YGPKGVGALWIRKEA----KLQPVILG  223 (382)
T ss_dssp             CCHHHHHHHHTTSSEE-EEECTTTBTTBCC-----CHHHHTCSEEEEETGGG-TCCSSCEEEEEETTC----CCCCSSCS
T ss_pred             CCHHHHHHHHHHCCCE-EEEcchhcCCccc-----CccccCCCEEEeehHHh-cCCCceEEEEEcccc----ccCceecC
Confidence            8999999999999999 9999987654321     121  479999999998 46766 999998741    01111100


Q ss_pred             --cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCC--CCceEEEccCCCCCc
Q 009673          343 --AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGS--DNHLVLVDLRPMGID  417 (529)
Q Consensus       343 --~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt--~~~~~~v~~~~~~i~  417 (529)
                        .......++++...++++..+++... .++++..+++.++++.+.+.|++. |+.+..+..  ..+++++.+.  +.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  300 (382)
T 4eb5_A          224 GGQENGLRSGSENVPSIVGFGKAAEITA-MEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS--YIE  300 (382)
T ss_dssp             SCTGGGTSCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET--TSC
T ss_pred             CCccccccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeC--CcC
Confidence              00011235666667777777777654 356788889999999999999885 888765421  1345555553  456


Q ss_pred             HHHHHHhHhcCCeEEcCCCC--CCCC--------CC----CCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          418 GARVEKILDMASITLNKNSV--PGDK--------SA----LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       418 ~~~~~~~L~~~GI~v~~~~~--Pg~~--------~~----~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      ..++.+.|.++||.+..+..  ++..        .+    ..++.|||++...+    +++|++++++.|+++++..
T Consensus       301 ~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~----~~~~i~~~~~~l~~~~~~~  373 (382)
T 4eb5_A          301 GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYN----TDEDVDRLLEVLPGVIERL  373 (382)
T ss_dssp             HHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTC----CHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCC----CHHHHHHHHHHHHHHHHHH
Confidence            77888888889999865321  1000        00    12478999976443    5899999999999988654

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=99.95  E-value=5.2e-26  Score=233.84  Aligned_cols=319  Identities=13%  Similarity=0.048  Sum_probs=227.7

Q ss_pred             hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-H
Q 009673          102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S  178 (529)
Q Consensus       102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s  178 (529)
                      ++.|+|..++|+  +++.|++++...+...  .+|+..      .. .+++    +.+++++|++++    +|.+++| +
T Consensus        30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~~------~~-~~lr----~~la~~~~~~~~----~v~~~~g~~   92 (365)
T 3get_A           30 KEVIKLASNENPFGTPPKAIECLRQNANKA--HLYPDD------SM-IELK----STLAQKYKVQNE----NIIIGAGSD   92 (365)
T ss_dssp             SCCEECSSCCCTTCSCHHHHHHHHHHGGGT--TSCCCT------TC-HHHH----HHHHHHHTCCGG----GEEEESSHH
T ss_pred             CceEEecCCCCCCCCCHHHHHHHHHHHHhh--ccCCCC------Ch-HHHH----HHHHHHhCCCcc----eEEECCCHH
Confidence            467899888875  5899999999877532  234431      11 3444    677888998765    3444555 4


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      +|+..++.++++|||+|++.+|.|.++..        .+...|.  +++.++++.+++ +|++++++.+++ ++++|+++
T Consensus        93 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~-~d~~~l~~~l~~-~~~~v~~~  160 (365)
T 3get_A           93 QVIEFAIHSKLNSKNAFLQAGVTFAMYEI--------YAKQCGA--KCYKTQSITHNL-DEFKKLYETHKD-EIKLIFLC  160 (365)
T ss_dssp             HHHHHHHHHHCCTTCEEEECSSCCTHHHH--------HHHHHTC--EEEECSSSSCCH-HHHHHHHHHTTT-TEEEEEEE
T ss_pred             HHHHHHHHHHhCCCCEEEEeCCChHHHHH--------HHHHcCC--EEEEEecCCCCC-CCHHHHHHHhCC-CCCEEEEc
Confidence            99999999999999999999987754421        2334454  677777633568 999999999986 89999998


Q ss_pred             CCCCCC--CCCHHHHHHHHH--HhCCEEEEecccccccc--cccccCCCCC-----cccEEEecccccc--cCCCCeEEE
Q 009673          259 ASAYPR--DFDYPRMRQIAD--AVGALLMMDMAHISGLV--AASVVADPFK-----YCDVVTTTTHKSL--RGPRGGMIF  325 (529)
Q Consensus       259 ~s~~p~--~~d~~~i~~ia~--~~g~~livD~ah~~Gli--~~~~~~~~~~-----~aDiv~~S~hK~l--~GprgG~i~  325 (529)
                      +++||+  ..+.+++.++++  ++|+++|+|++|..+..  ..+.......     ..+++++|+||++  +|+|.|+++
T Consensus       161 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  240 (365)
T 3get_A          161 LPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGI  240 (365)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEE
T ss_pred             CCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEE
Confidence            888886  778888888888  67999999999764321  1111111111     3458899999996  678889999


Q ss_pred             eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc
Q 009673          326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH  405 (529)
Q Consensus       326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~  405 (529)
                      +++      ++.+.+.....++   +++....+++..+++..  ..+++..+++.++++.+.+.|++.|+.+..+  ...
T Consensus       241 ~~~------~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~--~~~  307 (365)
T 3get_A          241 ANA------NIISAFYKLRAPF---NVSNLALKAAVAAMDDD--EFTEKTLENNFSQMELYKEFAKKHNIKIIDS--YTN  307 (365)
T ss_dssp             ECH------HHHHHHHHHSCTT---CSCHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHHHHHHHHHTTCEECCC--SSS
T ss_pred             cCH------HHHHHHHHhcCCC---CcCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhCCCEECCC--CCe
Confidence            976      7777776543332   24455555555566531  3457888889999999999999889887654  234


Q ss_pred             eEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          406 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       406 ~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      ++++++...  +..++.+.|.++||.+..+..++      ++++||++.       +++|++++++.|++++
T Consensus       308 ~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~~~~------~~~iRis~~-------~~~~i~~l~~~l~~~l  364 (365)
T 3get_A          308 FITYFFDEK--NSTDLSEKLLKKGIIIRNLKSYG------LNAIRITIG-------TSYENEKFFTEFDKIL  364 (365)
T ss_dssp             EEEEECSSS--CHHHHHHHHHTTTEECEECGGGT------CSEEEEECC-------CHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCC--CHHHHHHHHHHCCEEEEECccCC------CCEEEEEcC-------CHHHHHHHHHHHHHHh
Confidence            567777542  67788888888999986543221      678999964       4799999999998765

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=99.95  E-value=1.2e-25  Score=231.73  Aligned_cols=343  Identities=18%  Similarity=0.171  Sum_probs=229.2

Q ss_pred             eeEecCC-CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673          105 LELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE  183 (529)
Q Consensus       105 i~L~ase-n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~  183 (529)
                      +.|..+. ..+++.|++++...+.+.|..  +...+..+.... ......++++++++|++++.   .+...+|++|+..
T Consensus         3 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~l~~~la~~~g~~~~~---v~~~~g~t~a~~~   76 (384)
T 1eg5_A            3 VYFDNNATTRVDDRVLEEMIVFYREKYGN--PNSAHGMGIEAN-LHMEKAREKVAKVLGVSPSE---IFFTSCATESINW   76 (384)
T ss_dssp             EECBTTTCCCCCHHHHHHHHHHHHTCCCC--TTCSSHHHHHHH-HHHHHHHHHHHHHHTSCGGG---EEEESCHHHHHHH
T ss_pred             EEEecCccCCCCHHHHHHHHHHHHhcCCC--CccccHHHHHHH-HHHHHHHHHHHHHcCCCCCe---EEEECCHHHHHHH
Confidence            3444434 368999999999888765532  221111111112 22234568899999987642   1333455699999


Q ss_pred             HHHhhc----CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          184 VYTAIL----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       184 ~l~all----~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      ++.++.    +|||+|+++++.|.++....     ..+...|.  +++.++++ +++.+|+++|++.+++ ++++|+++.
T Consensus        77 ~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~  147 (384)
T 1eg5_A           77 ILKTVAETFEKRKRTIITTPIEHKAVLETM-----KYLSMKGF--KVKYVPVD-SRGVVKLEELEKLVDE-DTFLVSIMA  147 (384)
T ss_dssp             HHHHHHHHTTTTCCEEEECTTSCHHHHHHH-----HHHHHTTC--EEEECCBC-TTSCBCHHHHHHHCCT-TEEEEEEES
T ss_pred             HHHhhhhhccCCCCEEEECCCCchHHHHHH-----HHHHhcCC--EEEEEccC-CCCccCHHHHHHHhCC-CCeEEEEEC
Confidence            999987    89999999998775542111     01123454  67777776 4678999999999987 899999988


Q ss_pred             CCCCC--CCCHHHHHHHHHHhC--CEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchh
Q 009673          260 SAYPR--DFDYPRMRQIADAVG--ALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGV  334 (529)
Q Consensus       260 s~~p~--~~d~~~i~~ia~~~g--~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~  334 (529)
                      ++||+  ..|+++|.++|+++|  ++||+|++|..|....+...  . +.|++++|+||++ |+.| |+++++++     
T Consensus       148 ~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~--~-~~di~~~s~sK~~-g~~G~G~~~~~~~-----  218 (384)
T 1eg5_A          148 ANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEK--L-EVDYASFSAHKFH-GPKGVGITYIRKG-----  218 (384)
T ss_dssp             BCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTT--T-CCSEEEEEGGGGT-SCTTCEEEEECTT-----
T ss_pred             CCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchh--c-CCCEEEecHHHhc-CCCceEEEEEcCC-----
Confidence            88875  789999999999999  99999999875533211110  1 5799999999985 6766 99999883     


Q ss_pred             HH--Hhhhcccc--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC--CCceEE
Q 009673          335 EL--ESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS--DNHLVL  408 (529)
Q Consensus       335 ~l--~~~i~~~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt--~~~~~~  408 (529)
                       +  ...+....  .....++++...++++..+++... .++++..+++.++++.+.+.|.+.|+++..+..  ......
T Consensus       219 -~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~  296 (384)
T 1eg5_A          219 -VPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAV-EELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLS  296 (384)
T ss_dssp             -SCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEE
T ss_pred             -CccccccccCcccccccCCCCChHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHhCCCCeEEeCCcccCCCCEEE
Confidence             3  22221110  011234566666666666777643 356788899999999999999988888865421  123344


Q ss_pred             EccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCC----------CC----CCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673          409 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKS----------AL----VPGGIRIGSPAMTTRGFSEKEFVAIADFIH  474 (529)
Q Consensus       409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~----------~~----~~~~iRig~~~~tt~g~~~~d~~~la~~i~  474 (529)
                      +.+.  +.+..++.+.|.++||.+..+...+...          ..    ..+.|||++...    .+++|++++++.|+
T Consensus       297 ~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~----~~~~~i~~~~~~l~  370 (384)
T 1eg5_A          297 VSFP--NIRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKY----NTEEEVDYFLKKIE  370 (384)
T ss_dssp             EECT--TCCHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTT----CCHHHHHHHHHHHH
T ss_pred             EEeC--CCCHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCC----CCHHHHHHHHHHHH
Confidence            4443  3467788888989999996532111000          00    136899997643    35899999999999


Q ss_pred             HHHHH
Q 009673          475 EGVEI  479 (529)
Q Consensus       475 ~~~~~  479 (529)
                      ++++.
T Consensus       371 ~~~~~  375 (384)
T 1eg5_A          371 EILSF  375 (384)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98764

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=99.95  E-value=5.7e-26  Score=238.12  Aligned_cols=347  Identities=15%  Similarity=0.163  Sum_probs=234.2

Q ss_pred             hhcceeEecCC-CCCcHHHHHHHhhhhh--ccCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC
Q 009673          101 QFKSLELIASE-NFTSRAVMEAVGSCLT--NKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS  176 (529)
Q Consensus       101 ~~~~i~L~ase-n~~~~~V~eal~~~l~--~~y~~G~p~~-r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s  176 (529)
                      ..+.+.|..+. .++++.|++++...+.  +.|  ++|.. .+..+. ...+....+++++++++|++++.   .+..++
T Consensus        20 ~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~l~~~la~~~~~~~~~---v~~~~g   93 (423)
T 3lvm_A           20 MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTF--GNPASRSHRFGW-QAEEAVDIARNQIADLVGADPRE---IVFTSG   93 (423)
T ss_dssp             CCSSEECBTTTCCCCCHHHHHHHTTSSSTTSCC--SCTTCTTSHHHH-HHHHHHHHHHHHHHHHHTCCGGG---EEEESS
T ss_pred             cCCCEeecCCCcCCCCHHHHHHHHHHHhhcccc--cCCCccccchhH-HHHHHHHHHHHHHHHHcCCCCCe---EEEeCC
Confidence            34567776443 4789999999998876  444  34433 222111 22333445668999999998653   233455


Q ss_pred             hHHHHHHHHHhhcC----CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCC
Q 009673          177 GSPANFEVYTAILK----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRP  252 (529)
Q Consensus       177 Gs~A~~~~l~all~----pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~p  252 (529)
                      |++|+..++.++++    |||+|+++++.|.+.....     ..+...|.  +++.+++++ ++.+|+++|++.+++ ++
T Consensus        94 gt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~i~~-~~  164 (423)
T 3lvm_A           94 ATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTC-----RQLEREGF--EVTYLAPQR-NGIIDLKELEAAMRD-DT  164 (423)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHH-----HHHHHTTC--EEEEECCCT-TSCCCHHHHHHHCCT-TE
T ss_pred             hHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHH-----HHHHHcCC--EEEEeccCC-CCccCHHHHHHhcCC-Cc
Confidence            56999999998874    8999999998876543211     01122344  667777763 688999999999987 88


Q ss_pred             cEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCC
Q 009673          253 KLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKD  329 (529)
Q Consensus       253 klIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~  329 (529)
                      ++|+++.++||+  ..|+++|.++|+++|++||+|++|..|....+...   .++|++++|+||++ |+.| |+++++++
T Consensus       165 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~---~~~di~~~s~sK~~-g~~g~G~~~~~~~  240 (423)
T 3lvm_A          165 ILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQ---LKVDLMSFSGHKIY-GPKGIGALYVRRK  240 (423)
T ss_dssp             EEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTT---SCCSEEEEESTTTT-SCSSCEEEEECBT
T ss_pred             EEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhh---cCCCEEEechHHhc-CCCCeEEEEEecc
Confidence            999998887776  78999999999999999999999876644221111   15799999999965 5554 99999873


Q ss_pred             CcchhHHHhhhccccc------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCC
Q 009673          330 PVLGVELESAINNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGS  402 (529)
Q Consensus       330 ~~~~~~l~~~i~~~~~------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt  402 (529)
                            +.+.+.....      ....++++...++++..+++... ..+++..+++.++++.+.+.|++. |+.+..+..
T Consensus       241 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~  313 (423)
T 3lvm_A          241 ------PRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAK-EEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLE  313 (423)
T ss_dssp             ------TBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCST
T ss_pred             ------ccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCcc
Confidence                  3333433221      12245667777777777777553 236788888999999999999875 888875421


Q ss_pred             --CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCC--CCCCC--------CC----CCCeEEEccCCCccCCCCHHHH
Q 009673          403 --DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSV--PGDKS--------AL----VPGGIRIGSPAMTTRGFSEKEF  466 (529)
Q Consensus       403 --~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~--Pg~~~--------~~----~~~~iRig~~~~tt~g~~~~d~  466 (529)
                        ..+++.+.+  .+.+..++.+.|.+  |.+..+..  ++...        ..    .++.|||++...    .+++|+
T Consensus       314 ~~~~~~~~~~~--~~~~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~----~t~e~i  385 (423)
T 3lvm_A          314 HGAPNILNVSF--NYVEGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRF----TTEEEI  385 (423)
T ss_dssp             TBCTTEEEEEE--TTSCHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTT----CCHHHH
T ss_pred             ccCCCeEEEEe--CCCCHHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCC----CCHHHH
Confidence              123344444  34567788888876  77654321  10000        00    137899997643    458999


Q ss_pred             HHHHHHHHHHHHHHH
Q 009673          467 VAIADFIHEGVEITL  481 (529)
Q Consensus       467 ~~la~~i~~~~~~~~  481 (529)
                      +++++.|+++++...
T Consensus       386 ~~~~~~l~~~~~~~~  400 (423)
T 3lvm_A          386 DYTIELVRKSIGRLR  400 (423)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999987653

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=99.95  E-value=1.5e-25  Score=232.37  Aligned_cols=336  Identities=12%  Similarity=0.047  Sum_probs=228.8

Q ss_pred             hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-H
Q 009673          102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S  178 (529)
Q Consensus       102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s  178 (529)
                      ++.|+|..+++.  +++.+.+++...+.+.. .+|+.      .....++++.+.+++.+.+|++.+.  .+|.+++| +
T Consensus        30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~------~~g~~~l~~~la~~~~~~~g~~~~~--~~v~~~~g~~  100 (388)
T 1j32_A           30 IDVCSFSAGEPDFNTPKHIVEAAKAALEQGK-TRYGP------AAGEPRLREAIAQKLQRDNGLCYGA--DNILVTNGGK  100 (388)
T ss_dssp             CCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CSCCC------TTCCHHHHHHHHHHHHHHHCCCCCG--GGEEEESHHH
T ss_pred             CCEEECCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHHHHhcCCCCCh--hhEEEcCCHH
Confidence            356888877753  57899999987775321 22322      1223566767778888888864321  24555666 4


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEE
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA  257 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~  257 (529)
                      +|+..++.++++|||+|++.+|.|.++..        .+...|.  +++.++++++ ++.+|+++|++.+++ ++++|++
T Consensus       101 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~  169 (388)
T 1j32_A          101 QSIFNLMLAMIEPGDEVIIPAPFWVSYPE--------MVKLAEG--TPVILPTTVETQFKVSPEQIRQAITP-KTKLLVF  169 (388)
T ss_dssp             HHHHHHHHHHCCTTCEEEEESSCCTHHHH--------HHHHTTC--EEEEECCCGGGTTCCCHHHHHHHCCT-TEEEEEE
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCCChhHHH--------HHHHcCC--EEEEecCCcccCCCCCHHHHHHhcCc-CceEEEE
Confidence            99999999999999999999998765421        2334454  6666666542 478999999999987 7899998


Q ss_pred             cCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCC---C----CcccEEEecccccc--cCCCCeE
Q 009673          258 GASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP---F----KYCDVVTTTTHKSL--RGPRGGM  323 (529)
Q Consensus       258 ~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~----~~aDiv~~S~hK~l--~GprgG~  323 (529)
                      ++++||+  ..   ++++|.++|+++|+++|+|++|.. +...+....+   +    .+.|++++|+||++  +|+|.|+
T Consensus       170 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~  248 (388)
T 1j32_A          170 NTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEK-ILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGF  248 (388)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEE
T ss_pred             eCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchh-cccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEE
Confidence            8888876  33   589999999999999999999654 3332211111   1    13679999999997  5677899


Q ss_pred             EEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCC
Q 009673          324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGS  402 (529)
Q Consensus       324 i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt  402 (529)
                      +++++      ++.+.+......+..+.+...+.++ ..+++.. ...+++..+++.++++.+.+.|++. |+.+..+. 
T Consensus       249 ~~~~~------~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-  319 (388)
T 1j32_A          249 LAGPV------PLVKAATKIQGHSTSNVCTFAQYGA-IAAYENS-QDCVQEMLAAFAERRRYMLDALNAMPGLECPKPD-  319 (388)
T ss_dssp             EECCH------HHHHHHHHHHHTTTCSCCHHHHHHH-HHHHHSC-SHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCC-
T ss_pred             EEeCH------HHHHHHHHHHhhcccCCCHHHHHHH-HHHHhCC-cHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCC-
Confidence            99987      6766665433333334444433333 3355422 2345777888899999999999885 88776542 


Q ss_pred             CCceEEEccCCCCCcHHHHHHhHh-cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          403 DNHLVLVDLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       403 ~~~~~~v~~~~~~i~~~~~~~~L~-~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .+++.++++...+.+..++.+.|. ++||.+..+...+     .++++||++.      .++++++++++.|.++++
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~~~iRis~~------~~~~~i~~~~~~l~~~l~  385 (388)
T 1j32_A          320 GAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFG-----ADDCIRLSYA------TDLDTIKRGMERLEKFLH  385 (388)
T ss_dssp             BTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGT-----CTTBEEEECC------SCHHHHHHHHHHHHHHHH
T ss_pred             eeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhC-----CCCcEEEEec------CCHHHHHHHHHHHHHHHH
Confidence            344556666432456677777775 5899985432111     1578999964      358999999999988775

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=99.95  E-value=5e-26  Score=235.60  Aligned_cols=332  Identities=13%  Similarity=0.118  Sum_probs=228.7

Q ss_pred             cceeEecCCC---CCcHHHHHHHhhhhhccCCCCCCCCCCC-CCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673          103 KSLELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS  178 (529)
Q Consensus       103 ~~i~L~asen---~~~~~V~eal~~~l~~~y~~G~p~~r~~-~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs  178 (529)
                      ..|++..+++   ++++.+++++...+.+ +..+++..+|. +..+...++    ++.+++++|++.     .|.+++|+
T Consensus        40 ~~id~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~l----~~~la~~~g~~~-----~i~~~sGt  109 (384)
T 1bs0_A           40 QYLNFSSNDYLGLSHHPQIIRAWQQGAEQ-FGIGSGGSGHVSGYSVVHQAL----EEELAEWLGYSR-----ALLFISGF  109 (384)
T ss_dssp             EEEECSCCCTTSGGGCHHHHHHHHHHHHH-HCSCCCSBTTTTCCCHHHHHH----HHHHHHHHTCSE-----EEEESCHH
T ss_pred             eEEEeeccCccCCCCCHHHHHHHHHHHHH-hCCCCCCcCcccCChHHHHHH----HHHHHHHhCCCc-----EEEeCCcH
Confidence            4577777665   4689999999888754 33333434442 223334444    477888899862     46779999


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEE
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLII  256 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi  256 (529)
                      +|+..++.++++|||.|++.++.|++...        .+...|.  +++.++      .+|+++|++.+++.  ++++|+
T Consensus       110 ~a~~~~~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~~~~v~  173 (384)
T 1bs0_A          110 AANQAVIAAMMAKEDRIAADRLSHASLLE--------AASLSPS--QLRRFA------HNDVTHLARLLASPCPGQQMVV  173 (384)
T ss_dssp             HHHHHHHHHHCCTTCEEEEETTCCHHHHH--------HHHTSSS--EEEEEC------TTCHHHHHHHHHSCCSSCEEEE
T ss_pred             HHHHHHHHHhCCCCcEEEEcccccHHHHH--------HHHHcCC--CEEEeC------CCCHHHHHHHHHhcCCCCeEEE
Confidence            99999999999999999999987764421        2334554  555654      25899999998764  267888


Q ss_pred             EcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccccc-cccc-CCCC-CcccEEEecccccccCCCCeEEEeeCCCc
Q 009673          257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVA-ASVV-ADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPV  331 (529)
Q Consensus       257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~-~~~~-~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~~~  331 (529)
                      +++++||+  ..|+++|.++|++||+++|+|++|..|... .+.. ...+ .+.|++++|+||++ ||.||++++++   
T Consensus       174 ~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~-~~~GG~~~~~~---  249 (384)
T 1bs0_A          174 TEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGF-GVSGAAVLCSS---  249 (384)
T ss_dssp             EESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTT-SSCCEEEEECH---
T ss_pred             EeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchh-hccCcEEEeCH---
Confidence            88888876  779999999999999999999998776532 1110 1111 14789999999998 48889999987   


Q ss_pred             chhHHHhhhcccccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEc
Q 009673          332 LGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVD  410 (529)
Q Consensus       332 ~~~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~  410 (529)
                         ++.+.+.....+.. .++++....+++..+++.....+.++..+++.++++++.+.|++.|+++..+  ..++++++
T Consensus       250 ---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~~~~~  324 (384)
T 1bs0_A          250 ---TVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADS--CSAIQPLI  324 (384)
T ss_dssp             ---HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSCEECSC--CSSBCCEE
T ss_pred             ---HHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcCCcccCC--CCCEEEEE
Confidence               66666544211111 1234555555555567765322446788889999999999999888887642  34556666


Q ss_pred             cCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          411 LRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       411 ~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      +. .+.+..++.+.|.+.||.+.....|+.  +...+.+||+++..    .+++|++++++.|+++
T Consensus       325 ~~-~~~~~~~l~~~l~~~gi~v~~~~~~~~--~~~~~~~Ri~~~~~----~~~~~i~~~~~~l~~~  383 (384)
T 1bs0_A          325 VG-DNSRALQLAEKLRQQGCWVTAIRPPTV--PAGTARLRLTLTAA----HEMQDIDRLLEVLHGN  383 (384)
T ss_dssp             EE-SHHHHHHHHHHHHHTTEECCEECTTSS--CTTCEEECCBCCTT----CCHHHHHHHHHHHHHH
T ss_pred             eC-CHHHHHHHHHHHHHCCcEEEeecCCCC--CCCCceEEEEEcCC----CCHHHHHHHHHHHHhh
Confidence            63 223456677888788999966543331  12346899997643    3589999999998764

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.95  E-value=4.2e-26  Score=235.58  Aligned_cols=334  Identities=16%  Similarity=0.102  Sum_probs=225.8

Q ss_pred             cceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCC-CCceeee-cCChHHH
Q 009673          103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN-KWGVNVQ-PLSGSPA  180 (529)
Q Consensus       103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~-~~~~~V~-~~sGs~A  180 (529)
                      ..+.+.++...+++.|++++...+.+.   ++|        ...+.. ...+++++++++.... .. .+|. .++|++|
T Consensus         5 ~~~~~~p~p~~~~~~v~~a~~~~~~~~---~~~--------~~~~~~-~~~~~~l~~~~~~~~~~~~-~~v~~~~g~t~a   71 (385)
T 2bkw_A            5 VDTLLIPGPIILSGAVQKALDVPSLGH---TSP--------EFVSIF-QRVLKNTRAVFKSAAASKS-QPFVLAGSGTLG   71 (385)
T ss_dssp             CCEECSSSSCCCCHHHHHTTSCCCCCT---TSH--------HHHHHH-HHHHHHHHHHTTCCGGGTC-EEEEEESCTTHH
T ss_pred             cceeecCCCcCchHHHHHHHhcccccc---CCH--------HHHHHH-HHHHHHHHHHhCCCCCCCC-ceEEEcCchHHH
Confidence            457778888889999999997654321   111        111122 2345677777776410 00 1333 4555699


Q ss_pred             HHHHHHhhc---CCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc-CCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673          181 NFEVYTAIL---KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAILFRPKLII  256 (529)
Q Consensus       181 ~~~~l~all---~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v-~~~~~~iD~d~le~~i~~~~pklIi  256 (529)
                      +..++.+++   +|||+|++++.++..    .+.  ...+...|.  +++.+++ + +++.+|+++|++++++.++++|+
T Consensus        72 l~~~~~~~~~~~~~gd~vlv~~~~~~~----~~~--~~~~~~~g~--~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~~v~  142 (385)
T 2bkw_A           72 WDIFASNFILSKAPNKNVLVVSTGTFS----DRF--ADCLRSYGA--QVDVVRPLK-IGESVPLELITEKLSQNSYGAVT  142 (385)
T ss_dssp             HHHHHHHHSCTTCSCCEEEEECSSHHH----HHH--HHHHHHTTC--EEEEECCSS-TTSCCCHHHHHHHHHHSCCSEEE
T ss_pred             HHHHHHHHhccCCCCCeEEEEcCCcch----HHH--HHHHHHcCC--ceEEEecCC-CCCCCCHHHHHHHHhcCCCCEEE
Confidence            999999997   999999888543211    110  012233454  6667766 5 46789999999999765799999


Q ss_pred             EcCCCCCC--CCCHHHHHHHHHHh--CCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCC
Q 009673          257 AGASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD  329 (529)
Q Consensus       257 ~~~s~~p~--~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~  329 (529)
                      +++++||+  ..|+++|.++|++|  |+++|+|++|..|....+     +.  ++|++++|+||++.||.| |++++++ 
T Consensus       143 ~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~-----~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~-  216 (385)
T 2bkw_A          143 VTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFE-----FDEWGVDFALTASQKAIGAPAGLSISLCSS-  216 (385)
T ss_dssp             EESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCC-----TTTTTCSEEEEESSSTTCCCSCEEEEEECH-
T ss_pred             EEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCcccc-----ccccCceEEEecCccccccCCcceEEEEcH-
Confidence            98887775  78999999999999  999999999876643221     22  579999999999988877 9999987 


Q ss_pred             CcchhHHHh-hhcc---------------------cccC---CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673          330 PVLGVELES-AINN---------------------AVFP---GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR  384 (529)
Q Consensus       330 ~~~~~~l~~-~i~~---------------------~~~p---~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~  384 (529)
                           ++.+ ++..                     ....   ...++++...++++..+++.+...++++..+++.++++
T Consensus       217 -----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~  291 (385)
T 2bkw_A          217 -----RFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSD  291 (385)
T ss_dssp             -----HHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             -----HHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence                 4443 3310                     0000   11246677777777777876543346778888999999


Q ss_pred             HHHHHH-HhcCcEEecC-C---CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEc-cCCCcc
Q 009673          385 ALASRL-VELGYKLVSG-G---SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIG-SPAMTT  458 (529)
Q Consensus       385 ~l~~~L-~~~G~~v~~~-g---t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig-~~~~tt  458 (529)
                      ++.+.| ++.|+.++.+ +   ...+++++.+..    ..++.+.|.++||.+..+    ......++.+||+ ++. +.
T Consensus       292 ~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gi~v~~g----~~~~~~~~~iRis~~~~-~~  362 (385)
T 2bkw_A          292 WFKDSLVNGLQLTSVSRYPSNMSAHGLTAVYVAD----PPDVIAFLKSHGVVIAGG----IHKDIGPKYIRIGHMGV-TA  362 (385)
T ss_dssp             HHHHHHHTTTCCEESSCSSSTTBCSSCEEEECSC----HHHHHHHHHHTTEECBCC----CCTTTGGGEEEECCCGG-GT
T ss_pred             HHHHHHHHhcCceecccCcccccCCceEEEecCC----HHHHHHHHHHCCeEEeCC----CCcccCCCEEEEEcccc-cc
Confidence            999999 7778887752 1   134566666642    567778888899998543    2212235789999 431 11


Q ss_pred             CCCCHHHHHHHHHHHHHHHH
Q 009673          459 RGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       459 ~g~~~~d~~~la~~i~~~~~  478 (529)
                      +..+++|++++++.|+++++
T Consensus       363 ~~~~~e~i~~~~~~l~~~~~  382 (385)
T 2bkw_A          363 CNKNLPYMKNCFDLIKLALQ  382 (385)
T ss_dssp             SSTTCTHHHHHHHHHHHHTT
T ss_pred             ccCCHHHHHHHHHHHHHHHH
Confidence            12457999999999988754

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=99.94  E-value=2.8e-25  Score=228.23  Aligned_cols=315  Identities=16%  Similarity=0.130  Sum_probs=225.6

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-HH
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SP  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s~  179 (529)
                      +.|+|..++|+  +++.|++++...+...  .+||.       ....++    ++++++++|++++    +|.+++| ++
T Consensus        33 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~-------~~~~~l----r~~la~~~~~~~~----~v~~~~g~t~   95 (363)
T 3ffh_A           33 KITKLSSNENPLGTSKKVAAIQANSSVET--EIYPD-------GWASSL----RKEVADFYQLEEE----ELIFTAGVDE   95 (363)
T ss_dssp             CCEECSSCSCTTCCCHHHHHHHHTCBSCC--CBC-----------CHHH----HHHHHHHHTCCGG----GEEEESSHHH
T ss_pred             ceEEccCCCCCCCCCHHHHHHHHHHHHHh--hcCCC-------cchHHH----HHHHHHHhCCChh----hEEEeCCHHH
Confidence            56899888875  5899999998765321  12332       112333    4778889998765    3344555 59


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      |+..++.++++|||+|++++|.|.++.        ..+...|.  +++.+++++ ++.+|++++++.+++ ++++|++++
T Consensus        96 a~~~~~~~~~~~gd~vl~~~~~~~~~~--------~~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~i~~-~~~~v~~~~  163 (363)
T 3ffh_A           96 LIELLTRVLLDTTTNTVMATPTFVQYR--------QNALIEGA--EVREIPLLQ-DGEHDLEGMLNAIDE-KTTIVWICN  163 (363)
T ss_dssp             HHHHHHHHHCSTTCEEEEEESSCHHHH--------HHHHHHTC--EEEEEECCT-TSCCCHHHHHHHCCT-TEEEEEEES
T ss_pred             HHHHHHHHHccCCCEEEEcCCChHHHH--------HHHHHcCC--EEEEecCCC-CCCcCHHHHHHhccc-CCCEEEEeC
Confidence            999999999999999999998765432        12334454  666777764 688999999999987 899999998


Q ss_pred             CCCCC--CCCHHHHHHHHHHh--CCEEEEecccccccccccccCCCCC-----cccEEEecccccc--cCCCCeEEEeeC
Q 009673          260 SAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK-----YCDVVTTTTHKSL--RGPRGGMIFFKK  328 (529)
Q Consensus       260 s~~p~--~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~~-----~aDiv~~S~hK~l--~GprgG~i~~~~  328 (529)
                      ++||+  ..|.+++.++++.+  |+++|+|++|..+ .. +.....+.     ..++++.|+||++  +|.|.|++++++
T Consensus       164 p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~-~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~  241 (363)
T 3ffh_A          164 PNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEY-VT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADK  241 (363)
T ss_dssp             SCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGG-CS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECH
T ss_pred             CCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhh-cC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCH
Confidence            88876  78999999999887  9999999997633 22 21111111     2347889999987  577889999977


Q ss_pred             CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceE
Q 009673          329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLV  407 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~  407 (529)
                            ++.+.+.....+   .+++....+++..+++..  ..+++..+++.++++.+.+.|++ .|+.+..+  ...++
T Consensus       242 ------~~~~~l~~~~~~---~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~--~~~~~  308 (363)
T 3ffh_A          242 ------EIIRQLNIVRPP---FNTTSIGQKLAIEAIKDQ--AFIGECRTSNANGIKQYEAFAKRFEKVKLYPA--NGNFV  308 (363)
T ss_dssp             ------HHHHHHHHTCCS---CCCBHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHCTTCEECCC--CSSEE
T ss_pred             ------HHHHHHHHhCCC---CCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHhhCCCceECCC--CCeEE
Confidence                  777777654432   234555555555566531  34577888899999999999999 89988754  24556


Q ss_pred             EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      ++++..   +..++.+.|.++||.+..+..++     .++.+||++.       +++|++++++.|+++
T Consensus       309 ~~~~~~---~~~~~~~~l~~~gi~v~~g~~~~-----~~~~iRis~~-------~~~~i~~~~~~l~~~  362 (363)
T 3ffh_A          309 LIDLGI---EAGTIFSYLEKNGYITRSGAALG-----FPTAVRITIG-------KEEDNSAVIALLEKL  362 (363)
T ss_dssp             EEECSS---CHHHHHHHHHHTTEECEETTTTT-----CTTEEEEECC-------CHHHHHHHHHHHHHH
T ss_pred             EEECCC---CHHHHHHHHHHCCeEEEeCccCC-----CCCeEEEECC-------CHHHHHHHHHHHHHh
Confidence            777753   57788888888999986543222     2679999964       589999999999875

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=99.94  E-value=8.4e-26  Score=236.90  Aligned_cols=365  Identities=11%  Similarity=0.048  Sum_probs=242.4

Q ss_pred             hhhcccCChHHHHHHHHHHHHhhcceeEecCCCC--CcHHHHHHHhhhhhccC-CCCCCCCCCCCCchhHHHHHHHHHHH
Q 009673           80 DYSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKY-SEGLPGKRYYGGNEYIDELETLCQKR  156 (529)
Q Consensus        80 ~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~--~~~~V~eal~~~l~~~y-~~G~p~~r~~~g~~~~d~lE~~a~~~  156 (529)
                      .+.+...++..+..+.... ...+.|+|..+++.  +++.|++++...+.... ..+|+..      ....++++...++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~------~g~~~lr~~la~~   79 (422)
T 3fvs_A            7 ARRLDGIDYNPWVEFVKLA-SEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKT------FGYPPLTKILASF   79 (422)
T ss_dssp             CGGGTTCCCCHHHHHHHHH-HTSCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCT------TCCHHHHHHHHHH
T ss_pred             HHHhhccCccHHHHHHHHh-hcCCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCC------CCCHHHHHHHHHH
Confidence            3445566666554443322 23467888877763  68999999988876432 1234321      1124566666688


Q ss_pred             HHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC--
Q 009673          157 ALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE--  233 (529)
Q Consensus       157 la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~--  233 (529)
                      +.+.+|.+.+.- -+|.+++|+ +|+..++.++++|||+|++.+|.|.++..        .+...|.  +++.+++++  
T Consensus        80 ~~~~~g~~~~~~-~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~  148 (422)
T 3fvs_A           80 FGELLGQEIDPL-RNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEP--------MTMMAGG--RPVFVSLKPGP  148 (422)
T ss_dssp             HHHHHTCCCCHH-HHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECBCCC
T ss_pred             HHHhhCCCCCCC-CcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHH--------HHHHcCC--EEEEEeccccc
Confidence            888888764310 135556665 99999999999999999999998765421        2334454  556666653  


Q ss_pred             ---------CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          234 ---------STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       234 ---------~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                               .++.+|++++++.+++ ++++|++++++||+  ..   ++++|.++|++||+++|+|++|. ++...+..+
T Consensus       149 ~~~G~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~  226 (422)
T 3fvs_A          149 IQNGELGSSSNWQLDPMELAGKFTS-RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQ-WMVYDGHQH  226 (422)
T ss_dssp             CCSSSCCBGGGSBCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBCTTCCC
T ss_pred             ccccccccccCCCCCHHHHHhhcCC-CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccch-hhccCCCCC
Confidence                     2457999999999987 89999998888887  44   58999999999999999999965 334333222


Q ss_pred             CCC---C---cccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh----
Q 009673          300 DPF---K---YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA----  367 (529)
Q Consensus       300 ~~~---~---~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~----  367 (529)
                      .++   .   ..++++.|+||++  +|+|.|++++++      ++.+.+.........+. +....+++..+++..    
T Consensus       227 ~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~a~~~~l~~~~~~~  299 (422)
T 3fvs_A          227 ISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPD------HIMKHLRTVHQNSVFHC-PTQSQAAVAESFEREQLLF  299 (422)
T ss_dssp             CCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCH------HHHHHHHHHHHTTTCCC-CHHHHHHHHHHHHHHHHTT
T ss_pred             CChhhcccccCcEEEEecchhccCCccceEEEEEeCH------HHHHHHHHHHhhccCCC-CcHHHHHHHHHHhhccccc
Confidence            221   1   2348899999997  678889999987      66666654322222223 344444555566531    


Q ss_pred             --cCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCC--Cc----------HHH-HHHhHhcCCeEE
Q 009673          368 --QSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMG--ID----------GAR-VEKILDMASITL  432 (529)
Q Consensus       368 --~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~--i~----------~~~-~~~~L~~~GI~v  432 (529)
                        ....+++..+++.++++.+.+.|++.|+.+..+. .+++.|+++...+  .+          ..+ +..+|+++||.+
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v  378 (422)
T 3fvs_A          300 RQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQ-GSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVA  378 (422)
T ss_dssp             TCTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCS-BSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEEC
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCC-eeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEE
Confidence              2344578888999999999999999999876653 3566777764210  00          223 445577899998


Q ss_pred             cCCCCCCCC--CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          433 NKNSVPGDK--SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       433 ~~~~~Pg~~--~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ..+...+..  .+...+.+||++.      .+++++++.++.|+++++
T Consensus       379 ~~g~~f~~~~~~~~~~~~iRis~~------~~~e~i~~~l~~l~~~l~  420 (422)
T 3fvs_A          379 IPVSIFYSVPHQKHFDHYIRFCFV------KDEATLQAMDEKLRKWKV  420 (422)
T ss_dssp             EEGGGGSCHHHHTTSCSEEEEECC------CCHHHHHHHHHHHHHHHH
T ss_pred             eCcHHhcCCcCCCCCCCeEEEEec------CCHHHHHHHHHHHHHHHh
Confidence            653321110  1234688999864      268999999999988764

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=99.94  E-value=1.4e-25  Score=236.32  Aligned_cols=341  Identities=14%  Similarity=0.118  Sum_probs=233.9

Q ss_pred             hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673          102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-  178 (529)
Q Consensus       102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-  178 (529)
                      ++.|+|..+++.  +++.|++++...+.+....+|+..      ....++++...+++.+.+|.+.+.  .+|.+++|+ 
T Consensus        44 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~------~g~~~lr~~la~~~~~~~g~~~~~--~~i~~t~g~t  115 (437)
T 3g0t_A           44 TKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNL------DGLPELKQEASRFAKLFVNIDIPA--RACVPTVGSM  115 (437)
T ss_dssp             CCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCT------TCCHHHHHHHHHHHHHHHCCCCCG--GGEEEESHHH
T ss_pred             CCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCC------CChHHHHHHHHHHHHHhhCCCCCc--ccEEEeCCHH
Confidence            367888887764  589999999888764332344331      112466666667777777765321  245556666 


Q ss_pred             HHHHHHHHhhc--CCCC--EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcE
Q 009673          179 PANFEVYTAIL--KPHD--RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKL  254 (529)
Q Consensus       179 ~A~~~~l~all--~pGD--~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pkl  254 (529)
                      +|+..++.+++  +|||  +|++++|.|.++..        .+...|.  +++.++++++++.+|+++|++++...++++
T Consensus       116 ~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~  185 (437)
T 3g0t_A          116 QGCFVSFLVANRTHKNREYGTLFIDPGFNLNKL--------QCRILGQ--KFESFDLFEYRGEKLREKLESYLQTGQFCS  185 (437)
T ss_dssp             HHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHH--------HHHHHTC--CCEEEEGGGGCTTHHHHHHHHHHTTTCCCE
T ss_pred             HHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHH--------HHHHcCC--EEEEEeecCCCCccCHHHHHHHHhcCCceE
Confidence            99999999998  9999  99999987754321        2334454  455555654567899999999994448999


Q ss_pred             EEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCC--------CC---CcccEEEecccccc--
Q 009673          255 IIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVAD--------PF---KYCDVVTTTTHKSL--  316 (529)
Q Consensus       255 Ii~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--------~~---~~aDiv~~S~hK~l--  316 (529)
                      |+++.++||+  ..+   +++|+++|++||++||+|++|..+ ...+..+.        .+   ...+++++|+||++  
T Consensus       186 v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~  264 (437)
T 3g0t_A          186 IIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGM-DFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSY  264 (437)
T ss_dssp             EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTC-CTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSC
T ss_pred             EEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhc-ccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCC
Confidence            9998888886  444   778899999999999999997533 22221111        11   13458999999986  


Q ss_pred             cCCCCeEEEeeCCCcchhHHHh-h-----------------hcccccCCCCCCChHHHHHHHHHHHHHhcC--chHHHHH
Q 009673          317 RGPRGGMIFFKKDPVLGVELES-A-----------------INNAVFPGLQGGPHNHTIGGLAVCLKHAQS--PEFKVYQ  376 (529)
Q Consensus       317 ~GprgG~i~~~~~~~~~~~l~~-~-----------------i~~~~~p~~~g~p~~~~iaala~al~~~~~--~~~~~~~  376 (529)
                      +|+|.|++++++      ++.+ .                 +....... ..+++....+++..+++....  ..+++..
T Consensus       265 ~G~r~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  337 (437)
T 3g0t_A          265 AGQRIGVLMISG------KLYEREYPDLEESFGRLRFGEALSSSALYAL-SSGATHSAQWGMAAMLKACNDGEYNFRDSV  337 (437)
T ss_dssp             GGGCCEEEEECH------HHHHCBCGGGHHHHSCSBHHHHHHTTHHHHH-HSSSCHHHHHHHHHHHHHHHTTSCCHHHHH
T ss_pred             ccceeEEEEECH------HHhhhhhhcccccccccchhHHHHHHHHhhh-cCCCCHHHHHHHHHHHhCcHhHHHHHHHHH
Confidence            678889999987      6666 5                 43322111 123344445555556665321  1167888


Q ss_pred             HHHHHHHHHHHHHHHhcCcEEe------cCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEE
Q 009673          377 NKVVSNCRALASRLVELGYKLV------SGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIR  450 (529)
Q Consensus       377 ~~i~~~a~~l~~~L~~~G~~v~------~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iR  450 (529)
                      +++.++++.+.+.|++.|+.+.      .+...++++++++.  +++..++.+.|.++||.+.....++   ...++++|
T Consensus       338 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~gi~v~~~~~~~---~~~~~~iR  412 (437)
T 3g0t_A          338 IEYGRKARIMKKMFLDNGFNIVYDKDGNEPLADGFYFTVGYK--GMDSSKLIEKFVRYGMCAITLKTTG---SKRNEAMR  412 (437)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEESSCEETTEECCSSSEEEEEET--TCCHHHHHHHHHHTTEECEESTTTT---CCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHHcCCEEeccccCCCCCceeEEEEEecC--CCCHHHHHHHHHHcCeEEeeccccC---CCCCCEEE
Confidence            9999999999999999899887      22123566777775  5678888888888899996543222   11237899


Q ss_pred             EccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          451 IGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       451 ig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      |++...     +++|++++++.|+++++
T Consensus       413 is~~~~-----~~e~i~~~~~~l~~~~~  435 (437)
T 3g0t_A          413 ICTSLL-----PESQFPDLEKRLQMLNA  435 (437)
T ss_dssp             EECSSS-----CGGGHHHHHHHHHHHHH
T ss_pred             EEEecC-----CHHHHHHHHHHHHHHHh
Confidence            997643     47999999999988765

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=99.94  E-value=7.7e-26  Score=233.67  Aligned_cols=335  Identities=15%  Similarity=0.111  Sum_probs=224.0

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.|+|..+++.  .++.+++++...+.+....+|      +......++++...+++.+.+|++.+.- .+|.+++|+ +
T Consensus        26 ~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~l~~~ia~~~~~~~g~~~~~~-~~v~~~~g~~~   98 (376)
T 2dou_A           26 GLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGY------CLKSCTLPFLEEAARWYEGRYGVGLDPR-REALALIGSQE   98 (376)
T ss_dssp             CCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSC------CCHHHHHHHHHHHHHHHHHHHSCCCCTT-TSEEEESSHHH
T ss_pred             CEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCC------CCCCCCHHHHHHHHHHHHHHhCCCCCCC-ccEEEcCCcHH
Confidence            56888877764  579999999887743211223      2223456677666677777779862110 034446664 8


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      |+..++.++++|||+|++.+|.|.++..        .+...|.  +++.+++ ++++.+|++++++.+++ ++++|++++
T Consensus        99 a~~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~-~~~~~~d~~~l~~~l~~-~~~~v~l~~  166 (376)
T 2dou_A           99 GLAHLLLALTEPEDLLLLPEVAYPSYFG--------AARVASL--RTFLIPL-REDGLADLKAVPEGVWR-EAKVLLLNY  166 (376)
T ss_dssp             HHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHTTC--EEEEECB-CTTSSBCGGGSCHHHHH-HEEEEEECS
T ss_pred             HHHHHHHHhcCCCCEEEECCCCcHhHHH--------HHHHcCC--EEEEeeC-CCCCCCCHHHHHHhhcc-CceEEEECC
Confidence            9999999999999999999987755421        2233454  6666666 35567999999998876 789999988


Q ss_pred             CCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---C--cccEEEecccccc--cCCCCeEEEee
Q 009673          260 SAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTHKSL--RGPRGGMIFFK  327 (529)
Q Consensus       260 s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~--~aDiv~~S~hK~l--~GprgG~i~~~  327 (529)
                      ++||+  ..+   +++|.++|++||+++|+|++|..+ ...+.....+   +  ..+++++|+||++  +|+|.|+++++
T Consensus       167 p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  245 (376)
T 2dou_A          167 PNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQ-VYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGS  245 (376)
T ss_dssp             SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGG-BSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEEC
T ss_pred             CCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhc-ccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecC
Confidence            88886  444   778899999999999999997643 3222111111   1  3468899999997  67889999988


Q ss_pred             CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673          328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV  407 (529)
Q Consensus       328 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~  407 (529)
                      +      ++.+.+.........+. +....+++..+++.. ...+++..+++.++++.+.+.|++. +.+..+ ..++++
T Consensus       246 ~------~~~~~l~~~~~~~~~~~-~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~-~~~~~~  315 (376)
T 2dou_A          246 E------EALARLERVKGVIDFNQ-YAGVLRMGVEALKTP-KEVVRGYARVYRERALGMAEALKGV-LSLLPP-RATMYL  315 (376)
T ss_dssp             H------HHHHHHHHHHHHHCCCS-CHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHHHHHHHTTT-SEECCC-CBSSEE
T ss_pred             H------HHHHHHHHHHHhcccCC-CHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHh-cCccCC-CeeEEE
Confidence            7      67666654322211222 333444444455431 1234677788888999999999887 776543 234556


Q ss_pred             EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      ++++. .+.+..++.+.|.+.||.+..+...+   +..++++||++..      ++++++++++.|.+++
T Consensus       316 ~~~~~-~~~~~~~~~~~l~~~gi~v~~g~~f~---~~~~~~~Ris~~~------~~~~i~~~l~~l~~~l  375 (376)
T 2dou_A          316 WGRLP-EGVDDLEFGLRLVERGVALAPGRGFG---PGGKGFVRIALVR------PLEELLEAAKRIREAL  375 (376)
T ss_dssp             EEECC-TTCCHHHHHHHHHHTTEECEEGGGGC---GGGTTEEEEECCS------CHHHHHHHHHHHHHTC
T ss_pred             EEECC-CCCCHHHHHHHHHHCCEEEcCchhhC---CCCCCeEEEEecC------CHHHHHHHHHHHHHHh
Confidence            77775 34566777777777799986542221   1135789999752      4789999998887653

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=99.94  E-value=1.4e-25  Score=232.19  Aligned_cols=349  Identities=15%  Similarity=0.122  Sum_probs=230.4

Q ss_pred             cccCChHHHHHHHHHHHHhhcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673           83 LGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA  160 (529)
Q Consensus        83 l~~~d~~~~~~~~~e~~~~~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~  160 (529)
                      +....+..+..+..... ..+.|+|..+++.  .++.+.+++...+.+  ...|+.      .....+++    +.++++
T Consensus         7 ~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~------~~~~~~l~----~~la~~   73 (381)
T 1v2d_A            7 TEAAKESIFPRMSGLAQ-RLGAVNLGQGFPSNPPPPFLLEAVRRALGR--QDQYAP------PAGLPALR----EALAEE   73 (381)
T ss_dssp             GGGC---CHHHHHHHHH-HHTCEECCCCSCSSCCCHHHHHHHHHHTTT--SCSCCC------TTCCHHHH----HHHHHH
T ss_pred             hhhcCccHHHHHHHHHh-cCCeEEecCCCCCCCCCHHHHHHHHHHHHH--hcCCCC------CCCCHHHH----HHHHHh
Confidence            33444444443333222 2467888877753  578999999887753  122322      11123444    667788


Q ss_pred             cCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC--CCCCCC
Q 009673          161 FNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD--ESTGLV  238 (529)
Q Consensus       161 ~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~--~~~~~i  238 (529)
                      +++++++   .+...+|++|+..++.++++|||+|+++++.|.++..        .+...|.  +++.++++  ++++.+
T Consensus        74 ~~~~~~~---v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~~  140 (381)
T 1v2d_A           74 FAVEPES---VVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLP--------DAFLAGA--KARLVRLDLTPEGFRL  140 (381)
T ss_dssp             HTSCGGG---EEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECEEETTEEEC
T ss_pred             cCCChhh---EEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEEeCCCCCccCCc
Confidence            9988653   1333455699999999999999999999998765421        2334554  56666665  345789


Q ss_pred             CHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC----CcccEEE
Q 009673          239 DYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF----KYCDVVT  309 (529)
Q Consensus       239 D~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~----~~aDiv~  309 (529)
                      |+++|++.+++ ++++|++++++||+  ..   ++++|.++|++||+++|+|++|..+..  +..+.++    .+.|+++
T Consensus       141 d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--g~~~~~~~~~~~~~~~~~  217 (381)
T 1v2d_A          141 DLSALEKALTP-RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY--GERPRRLREFAPERTFTV  217 (381)
T ss_dssp             CHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS--SSCCCCHHHHCTTTEEEE
T ss_pred             CHHHHHHhcCc-CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc--CCCCCCHHHhcCCCEEEE
Confidence            99999999976 78999988888876  44   389999999999999999999754322  2111111    2578999


Q ss_pred             ecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHH
Q 009673          310 TTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-SPEFKVYQNKVVSNCRAL  386 (529)
Q Consensus       310 ~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-~~~~~~~~~~i~~~a~~l  386 (529)
                      +|+||++  +|+|.|++++++      ++.+.+....... ..+++....+++..+|+... ...+++..+++.++++++
T Consensus       218 ~s~sK~~~~~G~r~G~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l  290 (381)
T 1v2d_A          218 GSAGKRLEATGYRVGWIVGPK------EFMPRLAGMRQWT-SFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLL  290 (381)
T ss_dssp             EEHHHHTTCGGGCCEEEECCT------TTHHHHHHHHHHH-TSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred             eechhhcCCcccceEEEEeCH------HHHHHHHHHHhhc-ccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHH
Confidence            9999987  578889999987      4555543321111 11223344445555666432 345678888999999999


Q ss_pred             HHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHH
Q 009673          387 ASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEF  466 (529)
Q Consensus       387 ~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~  466 (529)
                      .+.|++.|+++..+. .++++++++...  +   +.++|+++||.+..+..++. .+..++++||++..      +++++
T Consensus       291 ~~~L~~~g~~~~~~~-~~~~~~~~~~~~--~---~~~~l~~~gi~v~~g~~~~~-~~~~~~~iRi~~~~------~~~~i  357 (381)
T 1v2d_A          291 AGGLRAMGLRVYVPE-GTYFLMAELPGW--D---AFRLVEEARVALIPASAFYL-EDPPKDLFRFAFCK------TEEEL  357 (381)
T ss_dssp             HHHHHHTTCCEECCS-BSSEEEEECTTC--C---HHHHHHHTCEECEEGGGGCS-SSCCTTEEEEECCS------CHHHH
T ss_pred             HHHHHHCCCEecCCC-cceEEEEecChH--h---HHHHHHhCCEEEecchHhCC-CCCCCCEEEEEeCC------CHHHH
Confidence            999999898877642 245667777532  2   77888999999865432211 11235789999753      58999


Q ss_pred             HHHHHHHHHHHHHH
Q 009673          467 VAIADFIHEGVEIT  480 (529)
Q Consensus       467 ~~la~~i~~~~~~~  480 (529)
                      +++++.|.+++...
T Consensus       358 ~~~~~~l~~~l~~~  371 (381)
T 1v2d_A          358 HLALERLGRVVNSP  371 (381)
T ss_dssp             HHHHHHHHHHC---
T ss_pred             HHHHHHHHHHHhhc
Confidence            99999999887643

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=99.94  E-value=1.1e-25  Score=235.60  Aligned_cols=321  Identities=15%  Similarity=0.163  Sum_probs=221.9

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH  192 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g-~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pG  192 (529)
                      .+|.|.+++...+. +|..++.+.+.+.| .+...+++    +++++++|.+.     .+.+++|++|+..++.++++||
T Consensus        74 ~~p~v~~a~~~~l~-~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~-----~i~~~sGt~a~~~~l~~~~~~g  143 (409)
T 3kki_A           74 NHPLIKARLAKSLL-EEQQSLFMSASFLQNDYDKPMIE----KRLAKFTGFDE-----CLLSQSGWNANVGLLQTICQPN  143 (409)
T ss_dssp             TCHHHHHHHHHHHH-SCCCCCCSBGGGGCSTTTSCHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTT
T ss_pred             CCHHHHHHHHHHHH-HcCCCCCccccccCCcHHHHHHH----HHHHHHhCCCe-----EEEecchHHHHHHHHHHhcCCC
Confidence            47999999988774 44433333332222 23333444    77888999875     3567999999999999999999


Q ss_pred             CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHH
Q 009673          193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPR  270 (529)
Q Consensus       193 D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~  270 (529)
                      |.|++.++.|+++..        .+...|.  ++++++      .+|+++|++++++.++++|++++++||+  ..++++
T Consensus       144 d~Vl~~~~~~~~~~~--------~~~~~g~--~~~~~~------~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~  207 (409)
T 3kki_A          144 TNVYIDFFAHMSLWE--------GARYANA--QAHPFM------HNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAE  207 (409)
T ss_dssp             CEEEEETTSCHHHHH--------HHHHTTC--EEEEEC------TTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHH
T ss_pred             CEEEECCCcCHHHHH--------HHHHcCC--eEEEec------CCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHH
Confidence            999999987765431        2334454  555544      2689999999987678999999888765  788999


Q ss_pred             HHHHHHHhCCEEEEeccccccccccccc----CCCC-CcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhccccc
Q 009673          271 MRQIADAVGALLMMDMAHISGLVAASVV----ADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVF  345 (529)
Q Consensus       271 i~~ia~~~g~~livD~ah~~Gli~~~~~----~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~  345 (529)
                      |+++|++||++||+|++|..|.......    ...+ ...|++++|+||++.++ ||++++++      ++.+.+.....
T Consensus       208 l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~-gg~v~~~~------~~~~~~~~~~~  280 (409)
T 3kki_A          208 LVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYR-AGAIWCNN------EVNRCVPFISY  280 (409)
T ss_dssp             HHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSS-CEEEEESS------SGGGTHHHHCH
T ss_pred             HHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCC-ceEEEECH------HHHHHHHHhCc
Confidence            9999999999999999987654321100    0011 24689999999999655 89999988      45444432211


Q ss_pred             CC-CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHh
Q 009673          346 PG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKI  424 (529)
Q Consensus       346 p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~  424 (529)
                      +. ..++++...++++.++++...  ...++.+++.++++++.+.|++.|+++..   ..+++++.+.. ..+..++.+.
T Consensus       281 ~~~~~~~~~~~~~aa~~aal~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~---~~~~~~~~~~~-~~~~~~~~~~  354 (409)
T 3kki_A          281 PAIFSSTLLPYEAAGLETTLEIIE--SADNRRQHLDRMARKLRIGLSQLGLTIRS---ESQIIGLETGD-ERNTEKVRDY  354 (409)
T ss_dssp             HHHHSBCCCHHHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHHHTTTCCCCC---SSSEEEEEEES-HHHHHHHHHH
T ss_pred             CccccCCCcHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCccCC---CCCEEEEEeCC-HHHHHHHHHH
Confidence            11 112234455555556676543  22577888899999999999998887663   34556666542 1234567777


Q ss_pred             HhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          425 LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       425 L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      |.+.||.+.....|..  +...+.|||+++..    .+++|++++++.|++++..
T Consensus       355 L~~~Gv~v~~~~~~~~--~~~~~~iRi~~~~~----~t~e~i~~~~~~l~~~l~~  403 (409)
T 3kki_A          355 LESNGVFGSVFCRPAT--SKNKNIIRLSLNSD----VNDEQIAKIIEVCSDAVNY  403 (409)
T ss_dssp             HHHTTEECEEECTTSS--CTTCEEEEEECCTT----CCHHHHHHHHHHHHHHHHH
T ss_pred             HHHCCceEeeeCCCCc--CCCCcEEEEEccCC----CCHHHHHHHHHHHHHHHhc
Confidence            7777999865433321  23457899998653    4589999999999998764

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=99.94  E-value=2.4e-25  Score=230.76  Aligned_cols=355  Identities=13%  Similarity=0.113  Sum_probs=233.5

Q ss_pred             cccCChHHHHHHHHHHHHhhcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673           83 LGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA  160 (529)
Q Consensus        83 l~~~d~~~~~~~~~e~~~~~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~  160 (529)
                      +....+..+..+.+.. ...+.|+|..+++.  .++.+++++...+.+. ..+|+.      .....++++...+++.+.
T Consensus        12 ~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~------~~g~~~l~~~la~~l~~~   83 (386)
T 1u08_A           12 LPQLGTTIFTQMSALA-QQHQAINLSQGFPDFDGPRYLQERLAHHVAQG-ANQYAP------MTGVQALREAIAQKTERL   83 (386)
T ss_dssp             CCCCCCCHHHHHHHHH-HHTTCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCC------TTCCHHHHHHHHHHHHHH
T ss_pred             hhcCCccHHHHHHHHH-hcCCeEEecCCCCCCCCCHHHHHHHHHHHHhh-ccCCCC------CCCCHHHHHHHHHHHHHH
Confidence            3344444454443322 22456888776642  6799999998877542 123322      111346676667888888


Q ss_pred             cCCCCCCCce-eeecCCh-HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCC
Q 009673          161 FNLDENKWGV-NVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV  238 (529)
Q Consensus       161 ~g~~~~~~~~-~V~~~sG-s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~i  238 (529)
                      +|.+.+.  . +|.+++| ++|+..++.++++|||+|++++|.|.++..        .+...|.  +++.++++++++.+
T Consensus        84 ~g~~~~~--~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~  151 (386)
T 1u08_A           84 YGYQPDA--DSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAP--------AIALSGG--IVKRMALQPPHFRV  151 (386)
T ss_dssp             HSCCCCT--TTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECCTTTCCC
T ss_pred             hCCCCCC--CCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEeecCcccCcC
Confidence            8864211  1 2334555 599999999999999999999998765421        2334454  66667776546789


Q ss_pred             CHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC------CcccE
Q 009673          239 DYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF------KYCDV  307 (529)
Q Consensus       239 D~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~------~~aDi  307 (529)
                      |+++|++.+++ ++++|++++++||+  ..   ++++|.++|++||+++|+|++|.. +...+....++      ...|+
T Consensus       152 d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~i  229 (386)
T 1u08_A          152 DWQEFAALLSE-RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEH-INFSQQGHASVLAHPQLRERAV  229 (386)
T ss_dssp             CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTT-CBCCSSCCCCGGGSHHHHTTEE
T ss_pred             CHHHHHHhhcc-cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccc-cccCCCCCcChhcccCccCcEE
Confidence            99999999976 88999998888886  44   478999999999999999999754 33322111111      14689


Q ss_pred             EEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Q 009673          308 VTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA  385 (529)
Q Consensus       308 v~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~  385 (529)
                      +++|+||++  +|+|.|++++++      ++.+.+.........+. +....+++..+|+.. ...+++..+++.++++.
T Consensus       230 ~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~~~-~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~  301 (386)
T 1u08_A          230 AVSSFGKTYHMTGWKVGYCVAPA------PISAEIRKVHQYLTFSV-NTPAQLALADMLRAE-PEHYLALPDFYRQKRDI  301 (386)
T ss_dssp             EEEEHHHHTTCGGGCCEEEECCH------HHHHHHHHHHHHHTSSC-CHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHH
T ss_pred             EEecchhhcCCcccceEEEEcCH------HHHHHHHHHHHhhccCC-ChHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHH
Confidence            999999997  577889999987      67666554321111222 333444555567653 33457778888899999


Q ss_pred             HHHHHHhcCcEEecCCCCCceEEEccCCCC-CcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCH
Q 009673          386 LASRLVELGYKLVSGGSDNHLVLVDLRPMG-IDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSE  463 (529)
Q Consensus       386 l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~-i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~  463 (529)
                      +.+.|++.|+.+..+. .++++++++...+ .+..++.+.| +++||.+..+...+. .+..++++||++.      .++
T Consensus       302 l~~~L~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~-~~~~~~~iRis~~------~~~  373 (386)
T 1u08_A          302 LVNALNESRLEILPCE-GTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCA-DPFPHKLIRLCFA------KKE  373 (386)
T ss_dssp             HHHHTTSSSCEECCCC-BSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCS-SCCCSCEEEEECC------SCH
T ss_pred             HHHHHHHCCCeecCCC-ceEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCC-CCCCCCEEEEEEc------CCH
Confidence            9999988888876542 3456777775321 4566676655 578999864321110 1124578999974      257


Q ss_pred             HHHHHHHHHHHH
Q 009673          464 KEFVAIADFIHE  475 (529)
Q Consensus       464 ~d~~~la~~i~~  475 (529)
                      ++++++++.|++
T Consensus       374 ~~i~~~~~~l~~  385 (386)
T 1u08_A          374 STLLAAAERLRQ  385 (386)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhh
Confidence            999998888753

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.94  E-value=2.9e-25  Score=230.78  Aligned_cols=329  Identities=16%  Similarity=0.099  Sum_probs=225.0

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      ..|+|..+++.  .++.+++++...+... ..+|+.      .....++++...+++.+.+|++.+.  .+|.+++|+ +
T Consensus        42 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~------~~g~~~lr~~la~~~~~~~g~~~~~--~~v~~~~g~t~  112 (389)
T 1o4s_A           42 DVINLTAGEPDFPTPEPVVEEAVRFLQKG-EVKYTD------PRGIYELREGIAKRIGERYKKDISP--DQVVVTNGAKQ  112 (389)
T ss_dssp             CCEECCCSSCSSCCCHHHHHHHHHHHTTC-CCCCCC------TTCCHHHHHHHHHHHHHHHTCCCCG--GGEEEESHHHH
T ss_pred             CEEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCH--HHEEEecCHHH
Confidence            56888877753  5789999998877532 122322      1223567766667777777874211  144556665 9


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      |+..++.++++|||+|++++|.|.++..        .+...|.  +++.++++++ ++.+|+++|++.+++ ++++|+++
T Consensus       113 al~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~  181 (389)
T 1o4s_A          113 ALFNAFMALLDPGDEVIVFSPVWVSYIP--------QIILAGG--TVNVVETFMSKNFQPSLEEVEGLLVG-KTKAVLIN  181 (389)
T ss_dssp             HHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECCGGGTTCCCHHHHHHTCCT-TEEEEEEE
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEEecCCccCCCCCHHHHHHhccc-CceEEEEc
Confidence            9999999999999999999998765421        2334554  5666666542 568999999999987 78999888


Q ss_pred             CCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC--C---CcccEEEecccccc--cCCCCeEEEe
Q 009673          259 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP--F---KYCDVVTTTTHKSL--RGPRGGMIFF  326 (529)
Q Consensus       259 ~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~--~---~~aDiv~~S~hK~l--~GprgG~i~~  326 (529)
                      +++||+  ..+   +++|.++|+++|+++|+|++|..+. ..+.....  +   .+.|++++|+||++  +|+|.|++++
T Consensus       182 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~-~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~  260 (389)
T 1o4s_A          182 SPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLV-YTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLIS  260 (389)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSB-CSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEEC
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccc-cCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEe
Confidence            888876  444   8999999999999999999976443 22211111  1   24689999999997  5778899999


Q ss_pred             eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673          327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL  406 (529)
Q Consensus       327 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~  406 (529)
                      ++      ++.+.+......+..+.+...+.++ ..+++    .++++..+++.++++.+.+.|++.|+++..+ ..+++
T Consensus       261 ~~------~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~  328 (389)
T 1o4s_A          261 SE------KVATAVSKIQSHTTSCINTVAQYAA-LKALE----VDNSYMVQTFKERKNFVVERLKKMGVKFVEP-EGAFY  328 (389)
T ss_dssp             CH------HHHHHHHHHHHHHTCSCCHHHHHHH-HHHTT----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC-SBSSE
T ss_pred             CH------HHHHHHHHHhhhcccCCCHHHHHHH-HHHHh----ccHHHHHHHHHHHHHHHHHHHHhcCCeeecC-CcceE
Confidence            87      6766665433222233333333332 22332    2257778889999999999999888877653 23455


Q ss_pred             EEEccCCCCCcHHHHHHhHh-cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          407 VLVDLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       407 ~~v~~~~~~i~~~~~~~~L~-~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .++++.   .+..++.+.|. ++||.+..+...+     .++++||++.      .++++++++++.|.+++.
T Consensus       329 ~~~~~~---~~~~~l~~~l~~~~gi~v~~g~~f~-----~~~~~Ris~~------~~~~~l~~~l~~l~~~l~  387 (389)
T 1o4s_A          329 LFFKVR---GDDVKFCERLLEEKKVALVPGSAFL-----KPGFVRLSFA------TSIERLTEALDRIEDFLN  387 (389)
T ss_dssp             EEEECS---SCHHHHHHHHHHHHCEECEEGGGGT-----CTTEEEEECC------SCHHHHHHHHHHHHHHHT
T ss_pred             EEEeCC---CCHHHHHHHHHHHCCEEEeCchhcC-----CCCeEEEEEe------CCHHHHHHHHHHHHHHHh
Confidence            666664   35677777774 8999985432211     1468999975      257899999998887663

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=99.94  E-value=6.1e-25  Score=223.01  Aligned_cols=313  Identities=18%  Similarity=0.211  Sum_probs=219.5

Q ss_pred             hhcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673          101 QFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS  178 (529)
Q Consensus       101 ~~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs  178 (529)
                      .++.|+|..++|+  +++.|++++...+.. + .+||       .+...+++    +.+++++|++++    +|.+++|+
T Consensus        15 ~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~-~~y~-------~~~~~~lr----~~la~~~~~~~~----~i~~t~G~   77 (337)
T 3p1t_A           15 AAQAVCLAFNENPEAVEPRVQAAIAAAAAR-I-NRYP-------FDAEPRVM----RKLAEHFSCPED----NLMLVRGI   77 (337)
T ss_dssp             CCCCEECSSCCCCSCCCHHHHHHHHHHGGG-T-TSCC-------TTHHHHHH----HHHHHHHTSCGG----GEEEESHH
T ss_pred             CCCceEeeCCCCCCCCCHHHHHHHHHhhhh-h-ccCC-------CCchHHHH----HHHHHHhCcCHH----HEEEeCCH
Confidence            4467999999885  589999999877643 1 1232       12334444    678888998864    45568887


Q ss_pred             -HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 009673          179 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA  257 (529)
Q Consensus       179 -~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~  257 (529)
                       +++..++.++  |||+|++.+|.|.++..        .+...|.  +++.++++ +++.+|++++++.  . ++++|++
T Consensus        78 ~~~l~~~~~~~--~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~--~-~~~~v~i  141 (337)
T 3p1t_A           78 DECFDRISAEF--SSMRFVTAWPGFDGYRA--------RIAVSGL--RHFEIGLT-DDLLLDPNDLAQV--S-RDDCVVL  141 (337)
T ss_dssp             HHHHHHHHHHS--TTSEEEEESSSCSHHHH--------HHTTSCC--EEEEECBC-TTSSBCHHHHTTC--C-TTEEEEE
T ss_pred             HHHHHHHHHhc--CCCeEEEeCCCcHHHHH--------HHHHcCC--EEEEecCC-CCCCCCHHHHHhh--c-CCCEEEE
Confidence             7888787777  99999999988765421        2334554  67777776 4578999999876  2 6899999


Q ss_pred             cCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccc--cCCCCeEEEeeCCCcch
Q 009673          258 GASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL--RGPRGGMIFFKKDPVLG  333 (529)
Q Consensus       258 ~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~  333 (529)
                      ++++||+  ..|.+++.++|+++++ +++|++|. ++...+.........+++++|+||++  +|+|.||+++++     
T Consensus       142 ~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~-~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~-----  214 (337)
T 3p1t_A          142 ANPSNPTGQALSAGELDQLRQRAGK-LLIDETYV-DYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPS-----  214 (337)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTG-GGSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECCH-----
T ss_pred             eCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCCh-hhccccccccccCCCEEEEeeCchhccCcchheEEEEeCH-----
Confidence            9898886  7899999999999997 56699965 33222211111124679999999997  588889999987     


Q ss_pred             hHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCC
Q 009673          334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP  413 (529)
Q Consensus       334 ~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~  413 (529)
                       ++.+.+.....+   .+++....+++..+++..  ..+.+..+++.++++.+.+.|++.|+.+..+.  ..++++... 
T Consensus       215 -~~~~~l~~~~~~---~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--~~~~~~~~~-  285 (337)
T 3p1t_A          215 -ELIAAMKRKQWF---CNVGTLDLHALEAALDND--RAREAHIAKTLAQRRRVADALRGLGYRVASSE--ANFVLVENA-  285 (337)
T ss_dssp             -HHHHHHHTTSCT---TCSCHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCS--SSEEEEECT-
T ss_pred             -HHHHHHHhhcCC---CCCCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHHCcCEECCCC--CeEEEEEcC-
Confidence             677777654322   233444555544455421  23567778888889999999998888776542  345555443 


Q ss_pred             CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          414 MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       414 ~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                         ++..+.+.|.++||.+..+..++     .++++||++.       +++|++++.+.|+++.
T Consensus       286 ---~~~~~~~~l~~~gi~v~~g~~~~-----~~~~iRis~~-------~~~~~~~l~~al~~~~  334 (337)
T 3p1t_A          286 ---AGERTLRFLRERGIQVKDAGQFG-----LHHHIRISIG-------REEDNDRLLAALAEYS  334 (337)
T ss_dssp             ---TTHHHHHHHHHTTEECEEGGGGT-----CCSEEEEECC-------CHHHHHHHHHHHHHHT
T ss_pred             ---CHHHHHHHHHHCCeEEEECccCC-----CCCeEEEecC-------CHHHHHHHHHHHHHHh
Confidence               34678888999999996543222     2579999964       4799999999998764

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=99.94  E-value=1.1e-25  Score=230.24  Aligned_cols=330  Identities=10%  Similarity=0.034  Sum_probs=226.3

Q ss_pred             cceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673          103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF  182 (529)
Q Consensus       103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~  182 (529)
                      +.+++.++...+|+.|++++...+.+... ++ +.+   +..+. ++.+.+++++++++|.+..+.  .+.+.+|++|+.
T Consensus         4 ~~~~~~p~p~~~~~~v~~~~~~~~~~~~~-~~-~~~---~~~~~-~~~~~~~~~la~~~g~~~~~~--v~~~~g~t~al~   75 (362)
T 3ffr_A            4 NKIYFTPGPSELYPTVRQHMITALDEKIG-VI-SHR---SKKFE-EVYKTASDNLKTLLELPSNYE--VLFLASATEIWE   75 (362)
T ss_dssp             CCEEECSSSCCCCTTHHHHHHHHHHTTTT-TS-CTT---SHHHH-HHHHHHHHHHHHHTTCCTTEE--EEEESCHHHHHH
T ss_pred             cceeccCCCcCCCHHHHHHHHHHhcCCcc-Cc-CCC---CHHHH-HHHHHHHHHHHHHhCCCCCcE--EEEeCCchHHHH
Confidence            35778888888999999888777654321 11 111   12333 333456789999999864221  233455669999


Q ss_pred             HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673          183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY  262 (529)
Q Consensus       183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~  262 (529)
                      .++.++++|  .+++..+++.++   .+.   ......|.  +++.++++ +++.+|+|+|+  +++ ++|+|++++++|
T Consensus        76 ~~~~~l~~~--~~i~~~~~~~~~---~~~---~~~~~~g~--~~~~v~~~-~~~~~d~~~l~--~~~-~~~~v~~~~~~n  141 (362)
T 3ffr_A           76 RIIQNCVEK--KSFHCVNGSFSK---RFY---EFAGELGR--EAYKEEAA-FGKGFYPADIT--VPA-DAEIICLTHNET  141 (362)
T ss_dssp             HHHHHHCSS--EEEEEECSHHHH---HHH---HHHHHTTC--EEEEEECC-TTCCCCGGGCC--CCT-TCCEEEEESEET
T ss_pred             HHHHhccCC--cEEEEcCcHHHH---HHH---HHHHHhCC--CeEEEecC-CCCCCCHHHHh--ccC-CccEEEEEcCCC
Confidence            999999988  444444332221   110   11223354  56666665 45789999998  555 899999998888


Q ss_pred             CC--CCCHHHHHHHHHHh-CCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHh
Q 009673          263 PR--DFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES  338 (529)
Q Consensus       263 p~--~~d~~~i~~ia~~~-g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~  338 (529)
                      |+  ..|+++|.++|++| |+++++|++|..|....     ++..+|++++|+||++.|+.| |++++++      ++.+
T Consensus       142 ptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~-----~~~~~d~~~~s~~K~~~~~~G~g~~~~~~------~~~~  210 (362)
T 3ffr_A          142 SSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKF-----DWTKIDSVFFSVQKCFGLPAGLGVWILND------RVIE  210 (362)
T ss_dssp             TTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCC-----CTTSCSEEEEETTSTTCCCSCCEEEEEEH------HHHH
T ss_pred             CcceeCCHHHHHHHHHhCCCCEEEEecccccCCccc-----ChhHCcEEEEecccccCCCCceEEEEECH------HHHH
Confidence            76  78999999999999 99999999987664322     222379999999999987777 8988887      5544


Q ss_pred             hhccccc--------------------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEE
Q 009673          339 AINNAVF--------------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKL  397 (529)
Q Consensus       339 ~i~~~~~--------------------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v  397 (529)
                      ++.....                    ....++++...++++..+++.+...++++..+++.++++++.+.|++. |+.+
T Consensus       211 ~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~  290 (362)
T 3ffr_A          211 KSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSF  290 (362)
T ss_dssp             HHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEE
T ss_pred             HhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCcee
Confidence            4432111                    111456677777777777775544457888899999999999999986 9988


Q ss_pred             ecCC---CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673          398 VSGG---SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH  474 (529)
Q Consensus       398 ~~~g---t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~  474 (529)
                      ..+.   ....++++.+..   +..++.+.|.+.||.+..+..     +..++.|||++...+    +++|++++++.|+
T Consensus       291 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gi~~~~g~~-----~~~~~~iRis~~~~~----~~e~i~~l~~~l~  358 (362)
T 3ffr_A          291 GVEDAKLRSMTTIVANTTM---LPGEINKILEPFDMAVGAGYG-----SKKETQIRIANFPAH----SLEQVHKLVQTLK  358 (362)
T ss_dssp             SSSCGGGBCSSEEEEEESS---CHHHHHHHHGGGTEEEEECSG-----GGTTTEEEEECCTTS----CHHHHHHHHHHHH
T ss_pred             ccCChhhcCCceEEEecCC---CHHHHHHHHHHCCeEEecCcc-----ccCCCEEEEECCCCC----CHHHHHHHHHHHH
Confidence            7521   123445555543   677888888888999965421     123578999986543    5899999999998


Q ss_pred             HHH
Q 009673          475 EGV  477 (529)
Q Consensus       475 ~~~  477 (529)
                      +++
T Consensus       359 ~~~  361 (362)
T 3ffr_A          359 EKI  361 (362)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            753

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=99.94  E-value=6.5e-26  Score=238.34  Aligned_cols=337  Identities=13%  Similarity=0.113  Sum_probs=232.7

Q ss_pred             hcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCCh
Q 009673          102 FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG  177 (529)
Q Consensus       102 ~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V~~~sG  177 (529)
                      ++.|+|..+++  ..++.|.+++...+.+. ..+|+.      .  .+++++.+++++++.+|.  +++    +|.+++|
T Consensus        61 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~------~--~~~l~~~l~~~l~~~~g~~~~~~----~v~~~~g  127 (421)
T 3l8a_A           61 PELLQMWVADMDFLPVPEIKEAIINYGREH-IFGYNY------F--NDDLYQAVIDWERKEHDYAVVKE----DILFIDG  127 (421)
T ss_dssp             TTCEECCSSCCCSCCCHHHHHHHHHHHHHC-CSSCBC------C--CHHHHHHHHHHHHHHHCCCCCGG----GEEEESC
T ss_pred             CCeeecccCCCCCCCCHHHHHHHHHHHhcC-CcCCCC------C--CHHHHHHHHHHHHHHhCCCCCHH----HEEEcCC
Confidence            35688877665  36899999998877542 123322      1  145666677899999994  443    3444555


Q ss_pred             H-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC--CCCCCCCHHHHHHHhhhcCCcE
Q 009673          178 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD--ESTGLVDYDMLEKTAILFRPKL  254 (529)
Q Consensus       178 s-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~--~~~~~iD~d~le~~i~~~~pkl  254 (529)
                      + +|+..++.++++|||+|++.+|.|.++..        .+...|.  +++.++++  ..++.+|+++|++++++.++++
T Consensus       128 ~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~  197 (421)
T 3l8a_A          128 VVPAISIALQAFSEKGDAVLINSPVYYPFAR--------TIRLNDH--RLVENSLQIINGRFEIDFEQLEKDIIDNNVKI  197 (421)
T ss_dssp             HHHHHHHHHHHHSCTEEEEEEEESCCHHHHH--------HHHHTTE--EEEEEECEEETTEEECCHHHHHHHHHHTTEEE
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCcHHHHH--------HHHHCCC--EEEeccccccCCCeeeCHHHHHHHhhccCCeE
Confidence            5 89999999999999999999987755321        2334454  55555554  2335789999999998448999


Q ss_pred             EEEcCCCCCC--C---CCHHHHHHHHHHhCCEEEEecccccccccccccCCCC-----C--cccEEEecccccc--cCCC
Q 009673          255 IIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-----K--YCDVVTTTTHKSL--RGPR  320 (529)
Q Consensus       255 Ii~~~s~~p~--~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-----~--~aDiv~~S~hK~l--~Gpr  320 (529)
                      |+++.++||+  .   .++++|+++|++||++||+|++|. ++...+....++     +  ..++++.|+||++  +|.+
T Consensus       198 vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~  276 (421)
T 3l8a_A          198 YLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQ-DLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTK  276 (421)
T ss_dssp             EEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGC
T ss_pred             EEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcccc-ccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhh
Confidence            9999888886  3   368999999999999999999964 444333222222     1  2348889999997  5778


Q ss_pred             CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEec
Q 009673          321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVS  399 (529)
Q Consensus       321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~  399 (529)
                      .|+++++++     ++.+.+.........++++...++++..+++.. ....++..+++.++++.+.+.|++ .++.++.
T Consensus       277 ~G~~~~~~~-----~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~  350 (421)
T 3l8a_A          277 NSFAIIQNE-----SLRRKFQYRQLANNQHEVPTVGMIATQAAFQYG-KPWLEELKTVIEGNIKLVIKELEAKTKIKVME  350 (421)
T ss_dssp             CEEEECCSH-----HHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCSCEEEC
T ss_pred             eEeEEcCCH-----HHHHHHHHHHHhcccCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhCCCceEeC
Confidence            899999842     676666543322223345656666666677642 233477888889999999999988 5888876


Q ss_pred             CCCCCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          400 GGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       400 ~gt~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      + ..+++.|+++...+.+..++.+.| +++||.+..+...+   +..++.+||+++      .++++++++++.|.++++
T Consensus       351 ~-~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~---~~~~~~iRi~~~------~~~~~i~~~l~~l~~~l~  420 (421)
T 3l8a_A          351 P-EGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFG---KEGKYFARLNVA------TPKNTVQEALSRIISVFG  420 (421)
T ss_dssp             C-SBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEGGGGC---GGGTTEEEEECC------SCHHHHHHHHHHHHHHC-
T ss_pred             C-CeeEEEEEeccccCCCHHHHHHHHHHhCCEEEECchhhC---CCCCCEEEEEec------CCHHHHHHHHHHHHHHHh
Confidence            4 234556688865455666676666 57899996543222   223578999965      358999999999988754

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=99.94  E-value=1.5e-25  Score=233.14  Aligned_cols=337  Identities=15%  Similarity=0.134  Sum_probs=228.8

Q ss_pred             cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCCh-
Q 009673          103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG-  177 (529)
Q Consensus       103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V~~~sG-  177 (529)
                      +.|+|..+++  .+++.|.+++...+.+. ..+|+.     +   ..++++...+++.+.+|.  +++    +|.+++| 
T Consensus        32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-----~---~~~l~~~la~~l~~~~g~~~~~~----~v~~t~g~   98 (399)
T 1c7n_A           32 EVVPLSVADMEFKNPPELIEGLKKYLDET-VLGYTG-----P---TEEYKKTVKKWMKDRHQWDIQTD----WIINTAGV   98 (399)
T ss_dssp             TCCCCCSSSCSSCCCHHHHHHHHHHHHHC-CCSSBC-----C---CHHHHHHHHHHHHHHHCCCCCGG----GEEEESSH
T ss_pred             CceeeeecCCCCCCCHHHHHHHHHHHhcC-CCCCCC-----C---cHHHHHHHHHHHHHHhCCCCChh----hEEEcCCH
Confidence            5678877776  35789999998877532 122322     1   346666666788877884  443    3445666 


Q ss_pred             HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC--CCCCCHHHHHHHhhhcCCcEE
Q 009673          178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAILFRPKLI  255 (529)
Q Consensus       178 s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~--~~~iD~d~le~~i~~~~pklI  255 (529)
                      ++|+..++.++++|||+|++.+|.|.++..        .+...|.  +++.++++++  ++.+|+++|++.++..++++|
T Consensus        99 ~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v  168 (399)
T 1c7n_A           99 VPAVFNAVREFTKPGDGVIIITPVYYPFFM--------AIKNQER--KIIECELLEKDGYYTIDFQKLEKLSKDKNNKAL  168 (399)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECSSCCTHHHH--------HHHTTTC--EEEECCCEEETTEEECCHHHHHHHHTCTTEEEE
T ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCcHhHHH--------HHHHcCC--EEEecccccCCCCEEEcHHHHHHHhccCCCcEE
Confidence            599999999999999999999988765421        2334454  6667666422  246999999999984478999


Q ss_pred             EEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCCC-------cccEEEecccccc--cCCCC
Q 009673          256 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-------YCDVVTTTTHKSL--RGPRG  321 (529)
Q Consensus       256 i~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-------~aDiv~~S~hK~l--~Gprg  321 (529)
                      +++.++||+  ..+   +++|.++|++||++||+|++|... ...+....++.       ..+++++|+||++  +|+|.
T Consensus       169 ~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  247 (399)
T 1c7n_A          169 LFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDL-IMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGM  247 (399)
T ss_dssp             EEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTC-BCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCC
T ss_pred             EEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCCCCcccHHHcCccccCcEEEEEeChhhccccchhe
Confidence            988888886  556   899999999999999999997643 32222111221       2348899999987  67788


Q ss_pred             eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-c-CcEEec
Q 009673          322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-L-GYKLVS  399 (529)
Q Consensus       322 G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~-G~~v~~  399 (529)
                      |+++++++     ++.+.+.....+...++++....+++..+++.. ...+++..+++.++++.+.+.|++ . |+.+..
T Consensus       248 G~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~  321 (399)
T 1c7n_A          248 SNIIIKNP-----DIRERFTKSRDATSGMPFTTLGYKACEICYKEC-GKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPL  321 (399)
T ss_dssp             EEEECCCH-----HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCC
T ss_pred             EEEEECCH-----HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEec
Confidence            99999753     566666543332223344444555555566542 233577788889999999999987 4 787654


Q ss_pred             CCCCCceEEEccCCCCCcHHHHHHhHh-cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          400 GGSDNHLVLVDLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       400 ~gt~~~~~~v~~~~~~i~~~~~~~~L~-~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      + ..+++.|+++...+.+..++.+.|. ++||.+..+...+   +..++++||++..      .+++++++++.|.++++
T Consensus       322 ~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRis~~~------~~~~l~~~l~~l~~~l~  391 (399)
T 1c7n_A          322 I-EGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFG---DGGIGFERINLAA------PSSVIQESLERLNKALK  391 (399)
T ss_dssp             C-SBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGC---GGGTTEEEEECCS------CHHHHHHHHHHHHHHHH
T ss_pred             C-CceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCccccC---CCCCCeEEEEecc------CHHHHHHHHHHHHHHHH
Confidence            3 2344556777533456777777774 8999986432211   1235789999753      36889999999988875


Q ss_pred             H
Q 009673          479 I  479 (529)
Q Consensus       479 ~  479 (529)
                      .
T Consensus       392 ~  392 (399)
T 1c7n_A          392 D  392 (399)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=99.94  E-value=1.1e-25  Score=234.55  Aligned_cols=339  Identities=14%  Similarity=0.059  Sum_probs=227.9

Q ss_pred             ceeEecCC-C--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          104 SLELIASE-N--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       104 ~i~L~ase-n--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      .|+|..++ +  .+++.|++++...+.+....+|+..   .|   ..++.+.+.+++++++|.+.+.- -+|.+++|+ +
T Consensus        41 ~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g---~~~l~~~l~~~l~~~~g~~~~~~-~~i~~~~g~~~  113 (407)
T 3nra_A           41 PVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEY---RG---DLGIRDLLAPRLAAFTGAPVDAR-DGLIITPGTQG  113 (407)
T ss_dssp             CEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCT---TC---CHHHHHHHHHHHHHHHTSCCCTT-TSEEEESHHHH
T ss_pred             eeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCC---CC---CHHHHHHHHHHHHHHhCCCCCCC-CcEEEeCCcHH
Confidence            46665533 3  3688999999887754222223221   12   23455556688999999853110 134445555 9


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC-----CCCCCCCHHHHHHHhhhcCCcE
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-----ESTGLVDYDMLEKTAILFRPKL  254 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~-----~~~~~iD~d~le~~i~~~~pkl  254 (529)
                      |+..++.++++|||+|++.+|.|.++..        .+...|.  +++.++++     .+++.+|+++|++.+++ ++++
T Consensus       114 a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~  182 (407)
T 3nra_A          114 ALFLAVAATVARGDKVAIVQPDYFANRK--------LVEFFEG--EMVPVQLDYVSADETRAGLDLTGLEEAFKA-GARV  182 (407)
T ss_dssp             HHHHHHHTTCCTTCEEEEEESCCTHHHH--------HHHHTTC--EEEEEEBCCCSSCCSSCCBCHHHHHHHHHT-TCCE
T ss_pred             HHHHHHHHhCCCCCEEEEcCCcccchHH--------HHHHcCC--EEEEeecccccccCcCCCcCHHHHHHHHhh-CCcE
Confidence            9999999999999999999988765431        2334555  56666663     24678999999999988 8999


Q ss_pred             EEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC-------CcccEEEecccccc--cCCC
Q 009673          255 IIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-------KYCDVVTTTTHKSL--RGPR  320 (529)
Q Consensus       255 Ii~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-------~~aDiv~~S~hK~l--~Gpr  320 (529)
                      |+++.++||+  ..+   +++|+++|++||+++|+|++|..+. ..+....++       ...++++.|+||++  +|.|
T Consensus       183 v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~-~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r  261 (407)
T 3nra_A          183 FLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLR-YAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYR  261 (407)
T ss_dssp             EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSB-CTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGC
T ss_pred             EEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccc-cCCCCCCChhhcCcccCCcEEEEeCcccccCCCeee
Confidence            9988888886  556   8999999999999999999976433 222211111       13458999999997  5788


Q ss_pred             CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEec
Q 009673          321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS  399 (529)
Q Consensus       321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~  399 (529)
                      .|++++++      ++.+.+.........+++ ....+++..+++. ....+++..+++.++++.+.+.|++. |+.+..
T Consensus       262 ~G~~~~~~------~~~~~l~~~~~~~~~~~~-~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~  333 (407)
T 3nra_A          262 LGVAFGSR------AIIARMEKLQAIVSLRAA-GYSQAVLRGWFDE-APGWMEDRIARHQAIRDELLHVLRGCEGVFART  333 (407)
T ss_dssp             CEEEEECH------HHHHHHHHHHHHHTSSSC-HHHHGGGGGTTCC-CTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCC
T ss_pred             EEEEEcCH------HHHHHHHHHHhhhccCCC-hHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHhcCCCceecc
Confidence            89999987      676666543222222232 2233333323331 12345778888899999999999885 887755


Q ss_pred             CCCCCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          400 GGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       400 ~gt~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +. ..+++++++...+.+..++.+.| +++||.+..+..++   +..++.|||++..      ++++++++++.|.++++
T Consensus       334 ~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRis~~~------~~~~i~~~~~~l~~~~~  403 (407)
T 3nra_A          334 PQ-AGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFS---PHTADSVRLNFSQ------DHEAAVAAARRIVTLVE  403 (407)
T ss_dssp             CS-BSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTC---TTCTTBEEEECCS------CHHHHHHHHHHHHHHHH
T ss_pred             CC-eeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhC---CCCCCEEEEEeCC------CHHHHHHHHHHHHHHHH
Confidence            42 34566777765456777777777 56799996543332   2346889999752      58999999999998876


Q ss_pred             H
Q 009673          479 I  479 (529)
Q Consensus       479 ~  479 (529)
                      .
T Consensus       404 ~  404 (407)
T 3nra_A          404 R  404 (407)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=99.94  E-value=1e-24  Score=229.42  Aligned_cols=361  Identities=12%  Similarity=0.050  Sum_probs=236.8

Q ss_pred             hcccCChHHHHHHHHHHHHhhcceeEecCCC--CCcHHHHHHHhhhhhcc--CCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 009673           82 SLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNK--YSEGLPGKRYYGGNEYIDELETLCQKRA  157 (529)
Q Consensus        82 ~l~~~d~~~~~~~~~e~~~~~~~i~L~asen--~~~~~V~eal~~~l~~~--y~~G~p~~r~~~g~~~~d~lE~~a~~~l  157 (529)
                      ++...++.++..+.+.. ...+.|+|..+++  ..++.|++++...+...  ...+|+.      .....++++.+.+++
T Consensus        18 ~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~------~~g~~~l~~~la~~l   90 (429)
T 1yiz_A           18 RYQGSTKSVWVEYIQLA-AQYKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTR------GFGHPRLVQALSKLY   90 (429)
T ss_dssp             SCCCCTTCHHHHHHHHH-HHHCCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCC------SSCCHHHHHHHHHHH
T ss_pred             HhhhCCchHHHHHHHHh-ccCCEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCC------CCCcHHHHHHHHHHH
Confidence            34445555665554432 2346788887765  35799999998877541  0112322      111345666666788


Q ss_pred             HHHcCCCCCCCce-eeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-
Q 009673          158 LAAFNLDENKWGV-NVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-  234 (529)
Q Consensus       158 a~~~g~~~~~~~~-~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-  234 (529)
                      .+.+|.+.+.  - +|.+++|+ +|+..++.++++|||+|++.+|.|.++..        .+...|.  +++.++++++ 
T Consensus        91 ~~~~g~~~~~--~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~  158 (429)
T 1yiz_A           91 SQLVDRTINP--MTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEP--------MVKAAGG--IPRFIPLKPNK  158 (429)
T ss_dssp             HHHHTSCCCT--TTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECBCCC
T ss_pred             HHHhCCCCCC--cCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEEeCCccc
Confidence            8878854211  1 34456665 99999999999999999999988765421        2334454  5666666544 


Q ss_pred             --------CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCC
Q 009673          235 --------TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP  301 (529)
Q Consensus       235 --------~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~  301 (529)
                              ++.+|+++|++.+++ ++++|++++++||+  ..   ++++|.++|++||++||+|++|.. +...+....+
T Consensus       159 ~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~g~~~~~  236 (429)
T 1yiz_A          159 TGGTISSADWVLDNNELEALFNE-KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEH-MVFEPFEHIR  236 (429)
T ss_dssp             SSSSEEGGGCBCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBCTTSCCCC
T ss_pred             ccccccccCcccCHHHHHHHhcc-CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccc-cccCCCCCcC
Confidence                    467999999999976 88999988888886  44   489999999999999999999653 3332211111


Q ss_pred             ---C---CcccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHH-----hc
Q 009673          302 ---F---KYCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH-----AQ  368 (529)
Q Consensus       302 ---~---~~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~-----~~  368 (529)
                         +   .+.|++++|+||++  +|.|.|++++++      ++.+.+.........+. +....+++..+|+.     ..
T Consensus       237 ~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~~~-~~~~~~a~~~~l~~~~~~~~~  309 (429)
T 1yiz_A          237 ICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPE------ALLKNLQMVHQNCVYTC-ATPIQEAIAVGFETELKRLKS  309 (429)
T ss_dssp             GGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCH------HHHHHHHHHHHTTTCCC-CHHHHHHHHHHHHHHHTTTTS
T ss_pred             hhhccCCcCceEEEecchhccCCCCcceEEEEeCH------HHHHHHHHHHhhcccCC-ChHHHHHHHHHHhcccccccc
Confidence               1   14689999999987  477889999987      67666654321111222 33344455556765     31


Q ss_pred             -CchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCC-----------CcHHHHHHhH-hcCCeEEcCC
Q 009673          369 -SPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMG-----------IDGARVEKIL-DMASITLNKN  435 (529)
Q Consensus       369 -~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~-----------i~~~~~~~~L-~~~GI~v~~~  435 (529)
                       ...+++..+++.++++.+.+.|.+.|+.+..+. .++++++++....           .+..++.+.| +++||.+..+
T Consensus       310 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g  388 (429)
T 1yiz_A          310 PECYFNSISGELMAKRDYMASFLAEVGMNPTVPQ-GGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPP  388 (429)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHHHTCEEEECS-BSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-cceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCc
Confidence             234577888889999999999988888876542 3456777775321           3455666655 5899999543


Q ss_pred             CCCCCCC--CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          436 SVPGDKS--ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       436 ~~Pg~~~--~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      ...+...  ...+++|||++.      .++++++++++.|.+++
T Consensus       389 ~~f~~~~~~~~~~~~iRis~~------~~~e~i~~~l~~l~~~l  426 (429)
T 1yiz_A          389 SAFYSEPNKHLGEDFVRYCFF------KKDENLQKAAEILRKWK  426 (429)
T ss_dssp             GGGSCGGGGGGTTTEEEEECC------SCHHHHHHHHHHHHHHS
T ss_pred             hHhCCCcccCCCCCeEEEEec------CCHHHHHHHHHHHHHhc
Confidence            2111000  012578999975      25899999999998765

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=99.94  E-value=2.3e-25  Score=233.28  Aligned_cols=337  Identities=14%  Similarity=0.097  Sum_probs=222.7

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC--C-CCCceeeecCCh
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--E-NKWGVNVQPLSG  177 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~--~-~~~~~~V~~~sG  177 (529)
                      +.|+|..+++.  .++.+++++...+......+|+.      .....++++.+.+++.+.+|.+  + ++  + +..++|
T Consensus        38 ~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~l~~~ia~~~~~~~g~~~~~~~~--v-~~t~g~  108 (412)
T 2x5d_A           38 DIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYST------SRGIPRLRRAISHWYRDRYDVQIDPESE--A-IVTIGS  108 (412)
T ss_dssp             CCEECSSCCCCSCCCHHHHHHHHHTC---------C------TTCCHHHHHHHHHHHHHHHCCCCCTTTS--E-EEESCH
T ss_pred             CEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC------CCCcHHHHHHHHHHHHHHhCCCCCCCcC--E-EEcCCh
Confidence            46888877753  57999999987764321122321      1223466666667777777863  3 22  1 333445


Q ss_pred             HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEE
Q 009673          178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLII  256 (529)
Q Consensus       178 s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi  256 (529)
                      ++|+..++.++++|||+|++.+|.|.++..        .+...|.  +++.++++++ ++.+|+++|++.+++ ++++|+
T Consensus       109 ~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~  177 (412)
T 2x5d_A          109 KEGLAHLMLATLDHGDTILVPNPSYPIHIY--------GAVIAGA--QVRSVPLVPGIDFFNELERAIRESIP-KPRMMI  177 (412)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHHTC--EEEEEECSTTSCHHHHHHHHHHTEES-CCSEEE
T ss_pred             HHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEeecCCccCCCCCHHHHHHhccc-CceEEE
Confidence            599999999999999999999998765421        2233454  6666667644 345899999999986 899999


Q ss_pred             EcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCC---C---CcccEEEecccccc--cCCCCeE
Q 009673          257 AGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP---F---KYCDVVTTTTHKSL--RGPRGGM  323 (529)
Q Consensus       257 ~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~---~~aDiv~~S~hK~l--~GprgG~  323 (529)
                      ++.++||+  ..   ++++|.++|++||+++|+|++|..+. ..+....+   +   ...|++++|+||++  +|+|.|+
T Consensus       178 l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~-~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  256 (412)
T 2x5d_A          178 LGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIV-YDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGF  256 (412)
T ss_dssp             EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCB-CTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEE
T ss_pred             ECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccc-cCCCCCCChhhccCccCcEEEEecCccccCCcccceEE
Confidence            98888886  44   37889999999999999999976543 22211111   1   14579999999998  5778899


Q ss_pred             EEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCC
Q 009673          324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD  403 (529)
Q Consensus       324 i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~  403 (529)
                      +++++      ++.+.+......... +++....+++..+|+.. ...+++..+++.++++.+.+.|++.|+.+..+ ..
T Consensus       257 ~~~~~------~~~~~l~~~~~~~~~-~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~  327 (412)
T 2x5d_A          257 MVGNP------ELVSALARIKSYHDY-GTFTPLQVAAIAALEGD-QQCVRDIARQYQQRRDVLVKGLREAGWMVENP-KA  327 (412)
T ss_dssp             EEECH------HHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCC-SB
T ss_pred             EEcCH------HHHHHHHHHHhhhcc-CCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCEecCC-Ce
Confidence            99977      666665543221112 22333444444456532 23457788888999999999998888877643 23


Q ss_pred             CceEEEccCCCCC---cHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          404 NHLVLVDLRPMGI---DGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       404 ~~~~~v~~~~~~i---~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      ++++++++. .++   +..++.+.| +++||.+..+..++   +..++++||++..      ++++++++++.|.+++..
T Consensus       328 g~~~~~~~~-~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~---~~~~~~iRis~~~------~~~~l~~~l~~l~~~l~~  397 (412)
T 2x5d_A          328 SMYVWAKIP-EPYAHLGSLEFAKKLLQDAKVSVSPGIGFG---DYGDDHVRFALIE------NRDRLRQAVRGIKAMFRA  397 (412)
T ss_dssp             SSEEEEECC-TTTGGGCHHHHHHHHHHHHCEECEEGGGGC---GGGTTEEEEECCS------CHHHHHHHHHHHHHHHHH
T ss_pred             eeEEEEEcC-CccCCCCHHHHHHHHHHHCCEEEeCchhhC---CCCCCeEEEEecC------CHHHHHHHHHHHHHHHHh
Confidence            456777774 344   566666666 56899986543221   1235789999753      579999999999988764

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=99.94  E-value=3.3e-25  Score=230.67  Aligned_cols=333  Identities=15%  Similarity=0.181  Sum_probs=227.8

Q ss_pred             cceeEecCCC--C-CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHH
Q 009673          103 KSLELIASEN--F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP  179 (529)
Q Consensus       103 ~~i~L~asen--~-~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~  179 (529)
                      ..|+|..+++  + +++.+++++...+.. +..++.+.++..|..   ++.+.+++++++++|.+.     .+.+++|++
T Consensus        44 ~~idl~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~---~~~~~l~~~la~~~g~~~-----v~~~~ggt~  114 (398)
T 3a2b_A           44 RVLMFGSNSYLGLTTDTRIIKAAQDALEK-YGTGCAGSRFLNGTL---DIHVELEEKLSAYVGKEA-----AILFSTGFQ  114 (398)
T ss_dssp             EEEECSCSCTTCGGGCHHHHHHHHHHHHH-HCSCCCSBTTTTCCC---HHHHHHHHHHHHHHTCSE-----EEEESSHHH
T ss_pred             eEEEeecccccCCCCCHHHHHHHHHHHHH-cCCCCCCcCcccCCc---HHHHHHHHHHHHHhCCCc-----EEEECCHHH
Confidence            4577777654  2 688999999887743 222333222222321   233344588899999752     344567779


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc---CCcEEE
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLII  256 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~---~pklIi  256 (529)
                      |+..++.++++|||+|++.+|.|+++..        .+...|.  +++.++.      +|+++|++.+++.   ++++|+
T Consensus       115 a~~~~~~~~~~~gd~V~~~~p~~~~~~~--------~~~~~g~--~~~~v~~------~d~~~l~~~l~~~~~~~~~~v~  178 (398)
T 3a2b_A          115 SNLGPLSCLMGRNDYILLDERDHASIID--------GSRLSFS--KVIKYGH------NNMEDLRAKLSRLPEDSAKLIC  178 (398)
T ss_dssp             HHHHHHHHSSCTTCEEEEETTCCHHHHH--------HHHHSSS--EEEEECT------TCHHHHHHHHHTSCSSSCEEEE
T ss_pred             HHHHHHHHHhCCCCEEEECCccCHHHHH--------HHHHcCC--ceEEeCC------CCHHHHHHHHHhhccCCceEEE
Confidence            9999999999999999999998765531        2344554  5666543      6899999999864   689999


Q ss_pred             EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccc-cccC-C--CCC-cccEEEecccccccCCCCeEEEeeCC
Q 009673          257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA-SVVA-D--PFK-YCDVVTTTTHKSLRGPRGGMIFFKKD  329 (529)
Q Consensus       257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~~~~-~--~~~-~aDiv~~S~hK~l~GprgG~i~~~~~  329 (529)
                      +++++||+  ..++++|.++|++||+++|+|++|..+.... +... .  .+. .+|++++|+||+++ |.|||+++++ 
T Consensus       179 ~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~GG~~~~~~-  256 (398)
T 3a2b_A          179 TDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLA-SLGGFVAGDA-  256 (398)
T ss_dssp             EESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTC-SSCEEEEECH-
T ss_pred             EeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEeccccccc-CCCcEEEeCH-
Confidence            98888875  7799999999999999999999987664311 1100 0  111 36899999999984 6679999987 


Q ss_pred             CcchhHHHhhhccccc-CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEE
Q 009673          330 PVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL  408 (529)
Q Consensus       330 ~~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~  408 (529)
                           ++.+.+..... ....++++..+.+++..+++..  ...++..+++.++++.+.+.|++.|+++..+  ..++++
T Consensus       257 -----~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~g~~~~  327 (398)
T 3a2b_A          257 -----DVIDFLKHNARSVMFSASMTPASVASTLKALEII--QNEPEHIEKLWKNTDYAKAQLLDHGFDLGAT--ESPILP  327 (398)
T ss_dssp             -----HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHH--HHCTHHHHHHHHHHHHHHHHHHHTTCCBCSC--CSSEEE
T ss_pred             -----HHHHHHHHhcccceecCCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHhcCCCcCCC--CCCEEE
Confidence                 67666654211 1122344555555444566653  2345678888999999999999888877654  246667


Q ss_pred             EccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          409 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +.+. .+.+..++.+.|.+.||.+..+..++.  +...+++||++...    ++++|++++++.|+++++
T Consensus       328 ~~~~-~~~~~~~l~~~l~~~gi~v~~~~~~~~--~~~~~~iRis~~~~----~~~e~i~~~~~~l~~~l~  390 (398)
T 3a2b_A          328 IFIR-SNEKTFWVTKMLQDDGVFVNPVVSPAV--PAEESLIRFSLMAT----HTYDQIDEAIEKMVKVFK  390 (398)
T ss_dssp             EECC-CHHHHHHHHHHHHHTTEECEEECTTTS--CGGGCEEEEECCTT----CCHHHHHHHHHHHHHHHH
T ss_pred             EEcC-CHHHHHHHHHHHHHCCcEEEeeCCCCC--CCCCceEEEEEeCC----CCHHHHHHHHHHHHHHHH
Confidence            7764 233456677777777999865433221  12357899997643    358999999999998875

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=99.94  E-value=3.2e-24  Score=221.21  Aligned_cols=322  Identities=17%  Similarity=0.151  Sum_probs=227.0

Q ss_pred             eeEecCCCC--CcHHHHHHHhhhhhccC--CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          105 LELIASENF--TSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       105 i~L~asen~--~~~~V~eal~~~l~~~y--~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      |+|..+++.  .++.+++++...+.+..  ..+|+.      ... .++++...+++.+.+|...+.  .+|.+++|+ +
T Consensus        33 idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~------~~~-~~l~~~la~~l~~~~g~~~~~--~~v~~~~G~~~  103 (369)
T 3cq5_A           33 IRLNTNENPYPPSEALVADLVATVDKIATELNRYPE------RDA-VELRDELAAYITKQTGVAVTR--DNLWAANGSNE  103 (369)
T ss_dssp             EECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCC------TTC-HHHHHHHHHHHHHHHCCCCCG--GGEEEESHHHH
T ss_pred             eeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCC------ccH-HHHHHHHHHhhhhcccCCCCh--HhEEECCChHH
Confidence            788777764  57899999988775421  112322      112 466766667777776654221  245667776 8


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      ++..++.++++|||+|++++|.|.++..        .+...|.  +++.++.+ +++.+|++++++.+++.++++|++++
T Consensus       104 al~~~~~~l~~~gd~Vl~~~~~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~  172 (369)
T 3cq5_A          104 ILQQLLQAFGGPGRTALGFQPSYSMHPI--------LAKGTHT--EFIAVSRG-ADFRIDMDVALEEIRAKQPDIVFVTT  172 (369)
T ss_dssp             HHHHHHHHHCSTTCEEEEEESSCTHHHH--------HHHHTTC--EEEEEECC-TTSSCCHHHHHHHHHHHCCSEEEEES
T ss_pred             HHHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCC--EEEEecCC-cCCCCCHHHHHHHhhccCCCEEEEeC
Confidence            8989999999999999999998865421        2334454  56666665 45689999999999765799999988


Q ss_pred             CCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--c-ccEEEecccccc--cCCCCeEEEeeCCCcc
Q 009673          260 SAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPVL  332 (529)
Q Consensus       260 s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~-aDiv~~S~hK~l--~GprgG~i~~~~~~~~  332 (529)
                      ++||+  ..|.+++.++|+.+++++|+|++|..+........ ..+  . .+++++|+||++  +|+|.|++++++    
T Consensus       173 ~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~----  247 (369)
T 3cq5_A          173 PNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATT-LLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP----  247 (369)
T ss_dssp             SCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGG-GTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT----
T ss_pred             CCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHH-HHhhCCCCEEEEEechHhcCCcccceEEEEeCH----
Confidence            88875  78999999999999999999999765432111010 011  2 458999999998  577889999987    


Q ss_pred             hhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccC
Q 009673          333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLR  412 (529)
Q Consensus       333 ~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~  412 (529)
                        ++.+.+.....++   +++....+++..+++..  ..+++..+++.++++.+.+.|++.|+.+..+  ..+++++++.
T Consensus       248 --~~~~~l~~~~~~~---~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~~~~~~~  318 (369)
T 3cq5_A          248 --AFIDAVMLVRLPY---HLSALSQAAAIVALRHS--ADTLGTVEKLSVERVRVAARLEELGYAVVPS--ESNFVFFGDF  318 (369)
T ss_dssp             --HHHHHHHTTSCTT---CSCHHHHHHHHHHHHTH--HHHHTHHHHHHHHHHHHHHHHHHHTCEEECC--SSSEEEEECC
T ss_pred             --HHHHHHHHcCCCC---CCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhCCCEECCC--CCeEEEEECC
Confidence              7777776543332   23444444444456531  2346778888899999999998888887643  3456677764


Q ss_pred             CCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          413 PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       413 ~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                         .+..++.+.|.++||.+..    |.    .++++||++.       +++|++++++.|++++.
T Consensus       319 ---~~~~~l~~~l~~~gi~v~~----~~----~~~~iRis~~-------~~~~i~~~~~~l~~~~~  366 (369)
T 3cq5_A          319 ---SDQHAAWQAFLDRGVLIRD----VG----IAGHLRTTIG-------VPEENDAFLDAAAEIIK  366 (369)
T ss_dssp             ---SSHHHHHHHHHHTTEECBC----CS----CTTEEEEECC-------CHHHHHHHHHHHHHHHT
T ss_pred             ---CCHHHHHHHHHHCCEEEEE----CC----CCCeEEEEeC-------CHHHHHHHHHHHHHHHh
Confidence               3567788888899999853    31    2578999964       47999999999988764

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=99.94  E-value=9.7e-25  Score=227.03  Aligned_cols=336  Identities=14%  Similarity=0.088  Sum_probs=222.2

Q ss_pred             cceeEecCCC--CCcHHHHHHHhhhhhccC---CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673          103 KSLELIASEN--FTSRAVMEAVGSCLTNKY---SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG  177 (529)
Q Consensus       103 ~~i~L~asen--~~~~~V~eal~~~l~~~y---~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG  177 (529)
                      +.|+|..+.+  .+++.+.+++...+.+..   ..+|+.      .....++++...+++.+.+|.+.+.  .+|.+++|
T Consensus        36 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~------~~g~~~lr~~la~~l~~~~g~~~~~--~~i~~~~g  107 (398)
T 3ele_A           36 NVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTS------AQGDVETRAAIAEFLNNTHGTHFNA--DNLYMTMG  107 (398)
T ss_dssp             GCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCC------TTCCHHHHHHHHHHHHHHHCCCCCG--GGEEEESS
T ss_pred             CeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCC------CCCcHHHHHHHHHHHHHHhCCCCCh--HHEEEccC
Confidence            5688877654  367899999988775421   123322      1112456666668888888854321  24455666


Q ss_pred             -HHHHHHHHHhhcCCC-CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673          178 -SPANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI  255 (529)
Q Consensus       178 -s~A~~~~l~all~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI  255 (529)
                       ++|+..++.++++|| |+|++.+|.|.++..        .+...|.  +++.++++++++.+|+|+|++.+++ ++++|
T Consensus       108 ~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v  176 (398)
T 3ele_A          108 AAASLSICFRALTSDAYDEFITIAPYFPEYKV--------FVNAAGA--RLVEVPADTEHFQIDFDALEERINA-HTRGV  176 (398)
T ss_dssp             HHHHHHHHHHHHCCSTTCEEEEESSCCTHHHH--------HHHHTTC--EEEEECCCTTTSSCCHHHHHHTCCT-TEEEE
T ss_pred             HHHHHHHHHHHHcCCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEEecCCcCCcCCHHHHHHHhCc-CCCEE
Confidence             599999999999999 999999998765421        2334454  6777777766679999999999987 89999


Q ss_pred             EEcCCCCCC--CCC---HHHHHHHHHH------hCCEEEEeccccccccccc-ccCCCCC--cccEEEecccccc--cCC
Q 009673          256 IAGASAYPR--DFD---YPRMRQIADA------VGALLMMDMAHISGLVAAS-VVADPFK--YCDVVTTTTHKSL--RGP  319 (529)
Q Consensus       256 i~~~s~~p~--~~d---~~~i~~ia~~------~g~~livD~ah~~Gli~~~-~~~~~~~--~aDiv~~S~hK~l--~Gp  319 (529)
                      +++.++||+  ..+   +++|.++|++      ||+++|+|++|.. +...+ ..+....  ..+++++|+||++  +|+
T Consensus       177 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  255 (398)
T 3ele_A          177 IINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYRE-IVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGE  255 (398)
T ss_dssp             EECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTT-CBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTT
T ss_pred             EEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccc-cccCCCCcCChHhhcCCeEEEEehhhcCCCccc
Confidence            998888887  555   6777789999      9999999999653 33332 1121111  3458999999997  678


Q ss_pred             CCeEEEeeCCCcchhHHHhhhcccc-cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEe
Q 009673          320 RGGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV  398 (529)
Q Consensus       320 rgG~i~~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~  398 (529)
                      |.||++++++......+.+.+.... ..+.. +++....+++..+++   ..   ...+++.++++.+.+.|++.|+.+.
T Consensus       256 r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~---~~---~~~~~~~~~~~~l~~~L~~~g~~~~  328 (398)
T 3ele_A          256 RIGYVLVPDEVYDKAELYAAVCGAGRALGYV-CAPSLFQKMIVKCQG---AT---GDINAYKENRDLLYEGLTRIGYHCF  328 (398)
T ss_dssp             CCEEEECCTTSTTHHHHHHHHHHHHHHTTCC-CSCHHHHHHHTTCTT---CC---CCHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred             eeEEEEEcchhhhHHHHHHHHHHHhhhcccc-CCCHHHHHHHHHHhc---CH---HHHHHHHHHHHHHHHHHHHcCCeec
Confidence            8899999884211001222222111 11111 222222222222222   11   1356777889999999988888877


Q ss_pred             cCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          399 SGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       399 ~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .+. .+.++|+++..  .+..++.+.|.++||.+..+..++     .++++||++.      .++++++++++.|.++++
T Consensus       329 ~~~-~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~-----~~~~iRis~~------~~~e~i~~~l~~l~~~l~  394 (398)
T 3ele_A          329 KPD-GAFYMFVKALE--DDSNAFCEKAKEEDVLIVAADGFG-----CPGWVRISYC------VDREMIKHSMPAFEKIYK  394 (398)
T ss_dssp             CCS-BSSEEEEECSS--SCHHHHHHHHHTTTEECEESGGGT-----CTTEEEEECC------SCHHHHHHHHHHHHHHHH
T ss_pred             CCC-eeEEEEEEcCC--CCHHHHHHHHHHCCEEEeCccccC-----CCCeEEEEec------CCHHHHHHHHHHHHHHHH
Confidence            542 34556777642  367778888999999996543221     2579999963      358999999999998876


Q ss_pred             H
Q 009673          479 I  479 (529)
Q Consensus       479 ~  479 (529)
                      .
T Consensus       395 ~  395 (398)
T 3ele_A          395 K  395 (398)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.94  E-value=3e-25  Score=232.20  Aligned_cols=338  Identities=17%  Similarity=0.113  Sum_probs=224.5

Q ss_pred             hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-H
Q 009673          102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S  178 (529)
Q Consensus       102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s  178 (529)
                      ++.|+|..+++.  .++.+++++ ..+.+.. .+|+.      .....++++...+++.+.+|.+.+.  .+|.+++| +
T Consensus        43 ~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~~-~~y~~------~~g~~~l~~~la~~~~~~~g~~~~~--~~v~~~~g~t  112 (409)
T 2gb3_A           43 VRIHHLNIGQPDLKTPEVFFERI-YENKPEV-VYYSH------SAGIWELREAFASYYKRRQRVDVKP--ENVLVTNGGS  112 (409)
T ss_dssp             CEEEECSSCCCCSCCCTHHHHHH-HHTCCSS-CCCCC------TTCCHHHHHHHHHHHHHTSCCCCCG--GGEEEESHHH
T ss_pred             CCEEeccCCCCCCCCCHHHHHHH-HHHhcCC-CCCCC------CCCcHHHHHHHHHHHHHHhCCCCCH--HHEEEeCCHH
Confidence            356888777653  578999999 7774321 23322      1223466766667777767754321  13444555 5


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcEEEE
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIA  257 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pklIi~  257 (529)
                      +|+..++.++++|||+|+++++.|.++..        .+...|.  +++.+++++ +++.+ +++|++.+++ ++++|++
T Consensus       113 ~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~-~~~l~~~l~~-~~~~v~~  180 (409)
T 2gb3_A          113 EAILFSFAVIANPGDEILVLEPFYANYNA--------FAKIAGV--KLIPVTRRMEEGFAI-PQNLESFINE-RTKGIVL  180 (409)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHHTC--EEEEEECCGGGTSCC-CTTGGGGCCT-TEEEEEE
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEeccCCCCCCcc-HHHHHHhhCc-CCeEEEE
Confidence            99999999999999999999998765421        2334454  666666653 23455 8889988877 8899998


Q ss_pred             cCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC---CcccEEEecccccc--cCCCCeEEEee
Q 009673          258 GASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSL--RGPRGGMIFFK  327 (529)
Q Consensus       258 ~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~~aDiv~~S~hK~l--~GprgG~i~~~  327 (529)
                      ++++||+  ..   ++++|.++|+++|++||+|++|..+. ..+.....+   ...|++++|+||++  +|.|.|+++++
T Consensus       181 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~  259 (409)
T 2gb3_A          181 SNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIV-FRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITR  259 (409)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCB-CSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECS
T ss_pred             CCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccc-cCCCCCCccccCCCCEEEEecchhccCCccceEEEEEEC
Confidence            8888875  33   58999999999999999999976543 222111112   24689999999998  56788999998


Q ss_pred             CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEE-ecCCCCCce
Q 009673          328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL-VSGGSDNHL  406 (529)
Q Consensus       328 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v-~~~gt~~~~  406 (529)
                      ++     ++.+.+........  +++....+++..+|+. ....+++..+++.++++.+.+.|++.|+.+ ..+ ..+.+
T Consensus       260 ~~-----~l~~~l~~~~~~~~--~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~  330 (409)
T 2gb3_A          260 NE-----ELISHAMKLAQGRL--APPLLEQIGSVGLLNL-DDSFFDFVRETYRERVETVLKKLEEHGLKRFTKP-SGAFY  330 (409)
T ss_dssp             CH-----HHHHHHHHHHHHSC--CCCHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCC-SBSSE
T ss_pred             cH-----HHHHHHHHHHhccC--CCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHcCceeeeCC-CeeEE
Confidence            73     45555543322222  3344444444445542 122356778888999999999998888877 443 23455


Q ss_pred             EEEccCCCCCcHHHHHHhHhcC------CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          407 VLVDLRPMGIDGARVEKILDMA------SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       407 ~~v~~~~~~i~~~~~~~~L~~~------GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      .++++.  +.+..++.+.|.+.      ||.+..+...+...+..++++||+++      .++++++++++.|+++++.
T Consensus       331 ~~~~~~--~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~------~~~e~i~~~~~~l~~~l~~  401 (409)
T 2gb3_A          331 ITAELP--VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV------LEKDLLSRAIDVLMEGLKM  401 (409)
T ss_dssp             EEEECS--SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC------SCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeC--CCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC------CCHHHHHHHHHHHHHHHHH
Confidence            666775  45667777777554      99986542221111123578999865      3589999999999988764

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=99.94  E-value=1.9e-26  Score=237.08  Aligned_cols=332  Identities=14%  Similarity=0.090  Sum_probs=222.4

Q ss_pred             cceeEec--CCCCCcHHHHHHHhhhhhccCCCCCC-CCC-CCCCchhHHHHHHHHHHH-HHHHcCCCCCCCceeeecCCh
Q 009673          103 KSLELIA--SENFTSRAVMEAVGSCLTNKYSEGLP-GKR-YYGGNEYIDELETLCQKR-ALAAFNLDENKWGVNVQPLSG  177 (529)
Q Consensus       103 ~~i~L~a--sen~~~~~V~eal~~~l~~~y~~G~p-~~r-~~~g~~~~d~lE~~a~~~-la~~~g~~~~~~~~~V~~~sG  177 (529)
                      +.+.|..  +..++++.|++++...+......++. ..+ .+...+...++    +++ +++++|.+      +|.+++|
T Consensus         8 ~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~la~~~~~~------~v~~~~g   77 (371)
T 2e7j_A            8 DFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDF----IHNQLPKFLGCD------VARVTNG   77 (371)
T ss_dssp             CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHH----HHTHHHHHTTSS------EEEEESS
T ss_pred             CcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHH----HHHHHHHHcCCC------EEEEeCC
Confidence            4456654  34568999999998877543211111 001 11122333444    477 88999987      2334555


Q ss_pred             -HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcc--cCCCCCCCCHHHHHHHhhh----c
Q 009673          178 -SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR--LDESTGLVDYDMLEKTAIL----F  250 (529)
Q Consensus       178 -s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~--v~~~~~~iD~d~le~~i~~----~  250 (529)
                       ++|+..++.++++|||+|+++++.|.++..        .+...|.  +++.++  ++ +++.+|+++|++.++.    .
T Consensus        78 ~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~  146 (371)
T 2e7j_A           78 AREAKFAVMHSLAKKDAWVVMDENCHYSSYV--------AAERAGL--NIALVPKTDY-PDYAITPENFAQTIEETKKRG  146 (371)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEETTCCHHHHH--------HHHHTTC--EEEEECCCCT-TTCCCCHHHHHHHHHHHTTTS
T ss_pred             hHHHHHHHHHHHhCCCCEEEEccCcchHHHH--------HHHHcCC--eEEEeecccC-CCCCcCHHHHHHHHHhhcccC
Confidence             699999999999999999999998765432        2334554  666666  65 3578999999999983    2


Q ss_pred             CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCC-CCeEEE
Q 009673          251 RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGP-RGGMIF  325 (529)
Q Consensus       251 ~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gp-rgG~i~  325 (529)
                      ++++|++++++||+  ..|+++|.++|+++|+++|+|++|..|....     .+.  +.|++++|+||++.++ ++|+++
T Consensus       147 ~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~-----~~~~~~~di~~~s~sK~~~~~~~~G~~~  221 (371)
T 2e7j_A          147 EVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPV-----SLKEIGADFIVGSGHKSMAASGPIGVMG  221 (371)
T ss_dssp             CEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCC-----CHHHHTCSEEEEEHHHHSSCCSSCEEEE
T ss_pred             CeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCC-----ChhhcCCCEEEecCCcCCCCCCCcEEEE
Confidence            78999998888776  7799999999999999999999987764321     111  4789999999998665 559999


Q ss_pred             eeCCCcchhHHHhh-hcccccCCC------CCCChHHHHHHHHHHHHHhcCchHHHHHHHH--HHHHHHHHHHHHhcCcE
Q 009673          326 FKKDPVLGVELESA-INNAVFPGL------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV--VSNCRALASRLVELGYK  396 (529)
Q Consensus       326 ~~~~~~~~~~l~~~-i~~~~~p~~------~g~p~~~~iaala~al~~~~~~~~~~~~~~i--~~~a~~l~~~L~~~G~~  396 (529)
                      +++      ++.+. +......+.      .++++...++++..+++.+..    ++.+++  .++++++.+.|++.|++
T Consensus       222 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~  291 (371)
T 2e7j_A          222 MKE------EWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEKLGIK  291 (371)
T ss_dssp             ECT------TTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHTTCE
T ss_pred             Eec------hhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCcE
Confidence            988      45555 544322111      345566667666666765431    456667  78899999999888888


Q ss_pred             EecCCC-CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEE-EccCCCccCCCCHHHHHHHHHHH
Q 009673          397 LVSGGS-DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIR-IGSPAMTTRGFSEKEFVAIADFI  473 (529)
Q Consensus       397 v~~~gt-~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iR-ig~~~~tt~g~~~~d~~~la~~i  473 (529)
                      +..+.. ..+++++++.    +..++.+.|.++||.+.. ..++.. ....++.+| |++...   ..+++|++++++.|
T Consensus       292 ~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~---~~~~~~i~~~~~~l  363 (371)
T 2e7j_A          292 QLGDNPHNHDLMFFHAE----VLYEISKKAKGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTY---GLSDEEVDYVLNAF  363 (371)
T ss_dssp             EESSSSCCSSEEEEECH----HHHHHHHHSSSGGGHHHH-HHHHTTEECSCTTCCSEEEEECT---TCCHHHHHHHHHHH
T ss_pred             EecCCCccCceEEEECC----CHHHHHHHHHHCCEEEEe-ccccccccCCCCCceEEEEeecc---CCCHHHHHHHHHHH
Confidence            875421 2456777664    566788888899999854 111000 011257899 987643   03589999999999


Q ss_pred             HHHHH
Q 009673          474 HEGVE  478 (529)
Q Consensus       474 ~~~~~  478 (529)
                      +++++
T Consensus       364 ~~~~~  368 (371)
T 2e7j_A          364 KEIIE  368 (371)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98875

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=99.94  E-value=3.2e-25  Score=235.10  Aligned_cols=356  Identities=13%  Similarity=0.097  Sum_probs=232.9

Q ss_pred             CChHHHHHHHHHHH--------HhhcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHH
Q 009673           86 ADPEVCEIITKEKE--------RQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK  155 (529)
Q Consensus        86 ~d~~~~~~~~~e~~--------~~~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~  155 (529)
                      ..+..+..+.+...        ...+.|+|..+++  .+++.+.+++...+.+....+|+.      .....++++.+.+
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~------~~g~~~lr~~ia~  106 (447)
T 3b46_A           33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSP------TRGRPSLINSLIK  106 (447)
T ss_dssp             CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCC------TTCCHHHHHHHHH
T ss_pred             cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCC------CCCCHHHHHHHHH
Confidence            55566666654432        2235788877764  357899999988775311122322      1112456656667


Q ss_pred             HHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC
Q 009673          156 RALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES  234 (529)
Q Consensus       156 ~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~  234 (529)
                      ++.+.+|.+.+.  .+|.+++|+ +|+..++.++++|||+|++++|.|.++..        .+...|.  +++.++++++
T Consensus       107 ~l~~~~g~~~~~--~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~  174 (447)
T 3b46_A          107 LYSPIYNTELKA--ENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIP--------NIELCGG--KVVYVPINPP  174 (447)
T ss_dssp             HHTTTTTSCCCG--GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEEEECC
T ss_pred             HHHHhcCCCCCh--hhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEEeCCCc
Confidence            777777765321  145567775 99999999999999999999998765421        2344555  5556666543


Q ss_pred             -----------CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccccc
Q 009673          235 -----------TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVV  298 (529)
Q Consensus       235 -----------~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~  298 (529)
                                 ++.+|+++|++.+++ ++++|++++++||+  ..   ++++|+++|++||++||+|++|. ++.+.+..
T Consensus       175 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~~~~g~~  252 (447)
T 3b46_A          175 KELDQRNTRGEEWTIDFEQFEKAITS-KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYE-HLYFTDSF  252 (447)
T ss_dssp             GGGGTSCBCSTTSEECHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT-TCBCSSCC
T ss_pred             cccccccccccCcccCHHHHHHhhcc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccch-hcccCCCC
Confidence                       467999999999976 89999999888886  32   68999999999999999999965 33433311


Q ss_pred             CC--CC----CcccEEEecccccc--cCCCCeEEEe-eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-
Q 009673          299 AD--PF----KYCDVVTTTTHKSL--RGPRGGMIFF-KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-  368 (529)
Q Consensus       299 ~~--~~----~~aDiv~~S~hK~l--~GprgG~i~~-~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-  368 (529)
                      ..  .+    .+.+++++|+||++  +|+|.||+++ ++      ++.+.+.........+.+.. ..+++..+|+... 
T Consensus       253 ~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~------~l~~~l~~~~~~~~~~~~~~-~~~a~~~aL~~~~~  325 (447)
T 3b46_A          253 TRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNA------ELLSYAAKAHTRICFASPSP-LQEACANSINDALK  325 (447)
T ss_dssp             CCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCH------HHHHHHHHHHHHHTSSCCHH-HHHHHHHHHHHHHH
T ss_pred             cCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCH------HHHHHHHHHHhhccCCCChH-HHHHHHHHHhCCcc
Confidence            11  12    14679999999997  5889999999 66      66666543211111223333 3444455676542 


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCC--------------CCcHHHHHHhH-hcCCeEEc
Q 009673          369 SPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM--------------GIDGARVEKIL-DMASITLN  433 (529)
Q Consensus       369 ~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~--------------~i~~~~~~~~L-~~~GI~v~  433 (529)
                      ...+++..+++.++++.+.+.|++.|+.+..+. .++++|+++...              +.+..++.+.| +++||.+.
T Consensus       326 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~  404 (447)
T 3b46_A          326 IGYFEKMRQEYINKFKIFTSIFDELGLPYTAPE-GTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAI  404 (447)
T ss_dssp             HTHHHHHHHHHHHHHHHHHHHHHHHTCCEECCS-BSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECB
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCC-eeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEE
Confidence            123577888899999999999998888876542 356677777532              13445566555 57999985


Q ss_pred             CCCCCCCCC--CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          434 KNSVPGDKS--ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       434 ~~~~Pg~~~--~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      ++...+...  +..+++|||++.      .+++++++.++.|.+
T Consensus       405 pg~~f~~~~~~~~~~~~iRls~~------~~~e~l~~~~~~l~~  442 (447)
T 3b46_A          405 PPTEFYIKEHEKAAENLLRFAVC------KDDAYLENAVERLKL  442 (447)
T ss_dssp             CGGGGSCGGGGGGGTTEEEEECC------SCHHHHHHHHHHGGG
T ss_pred             CchHhCCCCccCCCCCEEEEEEe------CCHHHHHHHHHHHHH
Confidence            432111000  112578999975      257888888887754

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=99.94  E-value=2.5e-25  Score=232.88  Aligned_cols=361  Identities=13%  Similarity=0.079  Sum_probs=234.7

Q ss_pred             hcccCChHHHHHHHHHHHHhhcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 009673           82 SLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALA  159 (529)
Q Consensus        82 ~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~  159 (529)
                      ++....+..+..+.+. ....+.|+|..+++.  .++.+.+++...+.+. ..+|+.      .....++++.+.+++.+
T Consensus         6 ~~~~~~~~~~~~~~~~-~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~------~~g~~~l~~~la~~~~~   77 (411)
T 2o0r_A            6 RLRPYATTVFAEMSAL-ATRIGAVNLGQGFPDEDGPPKMLQAAQDAIAGG-VNQYPP------GPGSAPLRRAIAAQRRR   77 (411)
T ss_dssp             GGGGGSSCHHHHHHHH-HHTTTCEESSCSSCSSCCCHHHHHHHHHHHHTT-CCSCCC------TTCCHHHHHHHHHHHHH
T ss_pred             HhHhcCccHHHHHHHH-hhcCCeeeccCcCCCCCCCHHHHHHHHHHHhcC-CCCCCC------CCCCHHHHHHHHHHHHH
Confidence            3444555555544432 223456888777653  5789999998887542 123332      11234667667788888


Q ss_pred             HcCCCCCCCce-eeecCCh-HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC--C
Q 009673          160 AFNLDENKWGV-NVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--T  235 (529)
Q Consensus       160 ~~g~~~~~~~~-~V~~~sG-s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~--~  235 (529)
                      .+|.+.+.  . +|.+++| ++|+..++.++++|||+|++++|.|.++..        .+...|.  +++.++++++  +
T Consensus        78 ~~g~~~~~--~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~  145 (411)
T 2o0r_A           78 HFGVDYDP--ETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSP--------VVAMAGA--HRVTVPLVPDGRG  145 (411)
T ss_dssp             HHCCCCCT--TTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECEEETTE
T ss_pred             HcCCCCCC--CceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHH--------HHHHcCC--EEEEeeccccccC
Confidence            88864221  1 3444665 499999999999999999999998865421        2334554  5566666533  4


Q ss_pred             CCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC------Cc
Q 009673          236 GLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF------KY  304 (529)
Q Consensus       236 ~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~------~~  304 (529)
                      +.+|+++|++.+++ ++++|+++.++||+  ..+   +++|.++|+++|++||+|++|..+. ..+..+.++      .+
T Consensus       146 ~~~d~~~l~~~l~~-~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~g~~~~~~~~~~~~~~  223 (411)
T 2o0r_A          146 FALDADALRRAVTP-RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLV-FDHARHLPLAGFDGMAE  223 (411)
T ss_dssp             EECCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCB-CTTCCCCCGGGSTTTGG
T ss_pred             CCCCHHHHHHhhcc-CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccc-cCCCCCcChhhccCCCC
Confidence            67999999999986 88999988888876  444   6899999999999999999976433 222111111      24


Q ss_pred             ccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 009673          305 CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN  382 (529)
Q Consensus       305 aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~  382 (529)
                      .|++++|+||++  +|+|.|++++++      ++.+.+.........+.+. ...+++..+|+.. ...+++..+++.++
T Consensus       224 ~~i~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~~~~~-~~~~a~~~~l~~~-~~~~~~~~~~~~~~  295 (411)
T 2o0r_A          224 RTITISSAAKMFNCTGWKIGWACGPA------ELIAGVRAAKQYLSYVGGA-PFQPAVALALDTE-DAWVAALRNSLRAR  295 (411)
T ss_dssp             GEEEEEEHHHHTTCTTTCEEEEECCH------HHHHHHHHHHHHHTSCCCT-THHHHHHHHHHHC-HHHHHHHHHHHHHH
T ss_pred             CEEEEeechhhcCCccceEEEEeeCH------HHHHHHHHHHhhccCCCCh-HHHHHHHHHHhCC-hHHHHHHHHHHHHH
Confidence            689999999987  567789999976      6666554322111111222 2334444566543 23457778888999


Q ss_pred             HHHHHHHHHhcCcEEecCCCCCceEEEccCCC-CCcHHHHHHhH-hcCCeEEcCCCCC-CCC-------CCCCCCeEEEc
Q 009673          383 CRALASRLVELGYKLVSGGSDNHLVLVDLRPM-GIDGARVEKIL-DMASITLNKNSVP-GDK-------SALVPGGIRIG  452 (529)
Q Consensus       383 a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~-~i~~~~~~~~L-~~~GI~v~~~~~P-g~~-------~~~~~~~iRig  452 (529)
                      ++.+.+.|++.|+.+..+. .+.++++++... +.+..++.+.| +++||.+..+... +..       ....++.+||+
T Consensus       296 ~~~l~~~L~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis  374 (411)
T 2o0r_A          296 RDRLAAGLTEIGFAVHDSY-GTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFT  374 (411)
T ss_dssp             HHHHHHHHHHHTCEECCCC-BSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEE
T ss_pred             HHHHHHHHHHcCCEecCCC-eeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEE
Confidence            9999999988888876542 345667777532 14566666655 5789998543211 100       00124679999


Q ss_pred             cCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          453 SPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       453 ~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +.      .+++|++++++.|.+++..
T Consensus       375 ~~------~~~e~i~~~~~~l~~~~~~  395 (411)
T 2o0r_A          375 FC------KRDDTLDEAIRRLSVLAER  395 (411)
T ss_dssp             CC------SCHHHHHHHHHHHGGGGC-
T ss_pred             ec------CCHHHHHHHHHHHHHHHhc
Confidence            63      2579999999999876543

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=99.94  E-value=1.9e-25  Score=233.15  Aligned_cols=341  Identities=11%  Similarity=0.002  Sum_probs=226.6

Q ss_pred             hcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673          102 FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-  178 (529)
Q Consensus       102 ~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-  178 (529)
                      .+.|+|..+++  ++++.|++++...+.+....+|+..      ....++++...+++.+.+|.+.+.- .+|.+++|+ 
T Consensus        23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~------~g~~~l~~~la~~~~~~~~~~~~~~-~~i~~~~g~~   95 (410)
T 3e2y_A           23 PSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRG------FGHPALVKALSCLYGKIYQRQIDPN-EEILVAVGAY   95 (410)
T ss_dssp             TTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCT------TCCHHHHHHHHHHHHHHHTSCCCTT-TSEEEESHHH
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCC------CChHHHHHHHHHHHHHHhCCCCCCC-CCEEEeCCcH
Confidence            35688887765  3689999999888754322344331      1124566666677887787653210 135556665 


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC----------CCCCCCHHHHHHHhh
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE----------STGLVDYDMLEKTAI  248 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~----------~~~~iD~d~le~~i~  248 (529)
                      +|+..++.++++|||+|++++|.|.++..        .+...|.  +++.+++++          +++.+|++++++.++
T Consensus        96 ~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~  165 (410)
T 3e2y_A           96 GSLFNSIQGLVDPGDEVIIMVPFYDCYEP--------MVRMAGA--VPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFS  165 (410)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECEECCCCSSCCBGGGEECCHHHHHTTCC
T ss_pred             HHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEEeccccccccccccccCCcCCHHHHHhhcC
Confidence            99999999999999999999988765421        2334454  455555432          245689999999997


Q ss_pred             hcCCcEEEEcCCCCCC--C---CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC------cccEEEecccccc-
Q 009673          249 LFRPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK------YCDVVTTTTHKSL-  316 (529)
Q Consensus       249 ~~~pklIi~~~s~~p~--~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~------~aDiv~~S~hK~l-  316 (529)
                      + ++++|++++++||+  .   .++++|+++|++||+++|+|++|. ++...+....++.      ..++++.|+||++ 
T Consensus       166 ~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g  243 (410)
T 3e2y_A          166 S-KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYE-WLVYTGHTHVKIATLPGMWERTITIGSAGKTFS  243 (410)
T ss_dssp             T-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSS
T ss_pred             C-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhh-hcccCCCCCCCHHHcCCccCeEEEEecchhhcC
Confidence            7 89999998888886  3   379999999999999999999965 4333332121111      2348889999987 


Q ss_pred             -cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHH------hcCchHHHHHHHHHHHHHHHHHH
Q 009673          317 -RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH------AQSPEFKVYQNKVVSNCRALASR  389 (529)
Q Consensus       317 -~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~------~~~~~~~~~~~~i~~~a~~l~~~  389 (529)
                       +|+|.|++++++      ++.+.+.........+. +....+++..+++.      .....+++..+++.++++.+.+.
T Consensus       244 ~~G~r~G~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  316 (410)
T 3e2y_A          244 VTGWKLGWSIGPA------HLIKHLQTVQQNSFYTC-ATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRL  316 (410)
T ss_dssp             CGGGCCEEEECCH------HHHHHHHHHHHTTTCCC-CHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCceEEEEEECH------HHHHHHHHHHHhhccCC-ChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHH
Confidence             578889999987      66666654332222233 33344444445653      11334578888899999999999


Q ss_pred             HHhcCcEEecCCCCCceEEEccCC--CCCcH---------HHHHHhHhcCCeEEcCCCCCCCCC--CCCCCeEEEccCCC
Q 009673          390 LVELGYKLVSGGSDNHLVLVDLRP--MGIDG---------ARVEKILDMASITLNKNSVPGDKS--ALVPGGIRIGSPAM  456 (529)
Q Consensus       390 L~~~G~~v~~~gt~~~~~~v~~~~--~~i~~---------~~~~~~L~~~GI~v~~~~~Pg~~~--~~~~~~iRig~~~~  456 (529)
                      |++.|+.+..+. .++++|+++..  .+++.         +.+..+|+++||.+..+...+...  +...+.|||++.  
T Consensus       317 L~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~--  393 (410)
T 3e2y_A          317 LNSVGLKPIVPD-GGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFI--  393 (410)
T ss_dssp             HHTTTCEEEBCS-BSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECC--
T ss_pred             HHHCCCeecCCC-ccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEc--
Confidence            999899876553 35667776643  12221         334556788999986543211100  113578999954  


Q ss_pred             ccCCCCHHHHHHHHHHHHH
Q 009673          457 TTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       457 tt~g~~~~d~~~la~~i~~  475 (529)
                          .+++++++.++.|++
T Consensus       394 ----~~~e~l~~~l~~l~~  408 (410)
T 3e2y_A          394 ----KKDSTLDAAEEIFRA  408 (410)
T ss_dssp             ----CCHHHHHHHHHHHHT
T ss_pred             ----CCHHHHHHHHHHHHh
Confidence                368999999998864

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=99.94  E-value=2e-25  Score=230.12  Aligned_cols=334  Identities=15%  Similarity=0.127  Sum_probs=225.8

Q ss_pred             hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-H
Q 009673          102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S  178 (529)
Q Consensus       102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s  178 (529)
                      ++.|+|..+++.  +++.|++++...+.+.. .+|+. .   +    .++++...+++.+.+|.+.+.  .+|.+++| +
T Consensus        23 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~-~---~----~~lr~~la~~~~~~~~~~~~~--~~i~~t~g~~   91 (377)
T 3fdb_A           23 QGVLPLWVAESDFSTCPAVLQAITDAVQREA-FGYQP-D---G----SLLSQATAEFYADRYGYQARP--EWIFPIPDVV   91 (377)
T ss_dssp             TTSEECCSSCCCSCCCHHHHHHHHHHHHTTC-CSSCC-S---S----CCHHHHHHHHHHHHHCCCCCG--GGEEEESCHH
T ss_pred             CCeeeecccCCCCCCCHHHHHHHHHHHHcCC-CCCCC-C---C----HHHHHHHHHHHHHHhCCCCCH--HHEEEeCChH
Confidence            467888887763  58999999988876422 23433 1   1    245555557777777754321  13444555 5


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      +|+..++.++++|||+|++.+|.|.++..        .+...|.  +++.++++++   +|+++|++.+++ ++++|+++
T Consensus        92 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~---~d~~~l~~~l~~-~~~~v~i~  157 (377)
T 3fdb_A           92 RGLYIAIDHFTPAQSKVIVPTPAYPPFFH--------LLSATQR--EGIFIDATGG---INLHDVEKGFQA-GARSILLC  157 (377)
T ss_dssp             HHHHHHHHHHSCTTCCEEEEESCCTHHHH--------HHHHHTC--CEEEEECTTS---CCHHHHHHHHHT-TCCEEEEE
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCCcHhHHH--------HHHHcCC--EEEEccCCCC---CCHHHHHHHhcc-CCCEEEEe
Confidence            99999999999999999999988765431        2333454  5666666643   999999999988 79999999


Q ss_pred             CCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccc-ccCCCCC-----cccEEEecccccc--cCCCCeEEE
Q 009673          259 ASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAAS-VVADPFK-----YCDVVTTTTHKSL--RGPRGGMIF  325 (529)
Q Consensus       259 ~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~-~~~~~~~-----~aDiv~~S~hK~l--~GprgG~i~  325 (529)
                      .++||+  ..   ++++|.++|++||+++|+|++|.. +...+ ....++.     ..++++.|+||++  +|.|.|+++
T Consensus       158 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~  236 (377)
T 3fdb_A          158 NPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAP-LVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQII  236 (377)
T ss_dssp             SSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGG-GBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEE
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccch-hhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEE
Confidence            888886  44   477788889999999999999654 33333 1122221     2348899999997  678889887


Q ss_pred             eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEecCCCC
Q 009673          326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSGGSD  403 (529)
Q Consensus       326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~~gt~  403 (529)
                      ..++     ++.+.+...... ...+++....+++..+++.. ...+++..+++.++++.+.+.|++.  |+.+..+. .
T Consensus       237 ~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~  308 (377)
T 3fdb_A          237 FSNP-----SDAEHWQQLSPV-IKDGASTLGLIAAEAAYRYG-TDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQ-A  308 (377)
T ss_dssp             CCSH-----HHHHHHHHSCHH-HHCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCS-B
T ss_pred             eCCH-----HHHHHHHHHHHh-hcCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCC-e
Confidence            7442     676666543211 12234444555555566643 2335778888999999999999884  88887542 3


Q ss_pred             CceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          404 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       404 ~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +++.|+++...+.+.+.+..+++++||.+..+...+   ...++.+||++.      .+++++++.++.|.+++.
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~~Ris~~------~~~e~i~~~l~~l~~~l~  374 (377)
T 3fdb_A          309 TYLMWIDFRDTTIEGSPSEFFIEKAKVAMNDGAWFG---EDGTGFCRLNFA------TSREVLEEAIDRMAKAVS  374 (377)
T ss_dssp             CSEEEEECTTSCCCSCHHHHHHHHHCEECEEGGGGC---GGGTTEEEEECC------SCHHHHHHHHHHHHHHHT
T ss_pred             eEEEEEECcccCCCHHHHHHHHHhCCEEecCChhcc---CCCCCEEEEEeC------CCHHHHHHHHHHHHHHHh
Confidence            455577876544454445666677799996432211   113578999965      258999999999988764

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=99.94  E-value=2.6e-26  Score=238.77  Aligned_cols=342  Identities=15%  Similarity=0.143  Sum_probs=215.7

Q ss_pred             cceeEecCC-CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC-hHHH
Q 009673          103 KSLELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPA  180 (529)
Q Consensus       103 ~~i~L~ase-n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s-Gs~A  180 (529)
                      +.+.|..+. .++++.|++++...+.+.+  +.+...+..+. ...++.+.+++++++++|++++    +|.+++ |++|
T Consensus        20 ~~iyld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~l~~~la~~~~~~~~----~v~~~~g~t~a   92 (400)
T 3vax_A           20 HMTYLDAAATTRVDQRVADIVLHWMTAEF--GNAGSRHEYGI-RAKRGVERAREYLASTVSAEPD----ELIFTSGATES   92 (400)
T ss_dssp             --CCCCCCCCSSSCHHHHHHHHHHHHHHH--SCSSCHHHHHH-HHHHHHHHHHHHHHHHTTCCGG----GEEEESCHHHH
T ss_pred             CcEEecCCCCCCCCHHHHHHHHHHHHhcc--CCCcccchhHH-HHHHHHHHHHHHHHHHcCCCCC----cEEEeCCHHHH
Confidence            445555433 4689999999998876544  23332222221 2233344567899999999864    233455 4599


Q ss_pred             HHHHHHhhc----CCCC-EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673          181 NFEVYTAIL----KPHD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI  255 (529)
Q Consensus       181 ~~~~l~all----~pGD-~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI  255 (529)
                      +..++.+++    +||| +|++++++|++......     .+...|.  +++.++++ +++.+|+++|++.+++ ++++|
T Consensus        93 l~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~-----~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~-~~~~v  163 (400)
T 3vax_A           93 NNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLE-----HLAGRGF--EVDFLTPG-PSGRISVEGVMERLRP-DTLLV  163 (400)
T ss_dssp             HHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHH-----HHHTTTC--EEEEECCC-TTCCCCHHHHHTTCCT-TEEEE
T ss_pred             HHHHHHHHHHhhccCCCCEEEECccccHhHHHHHH-----HHHhcCC--eEEEEccC-CCCCcCHHHHHHhcCC-CceEE
Confidence            999999998    8999 99999988765432111     1112344  67777776 4688999999999987 89999


Q ss_pred             EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEE-eeCCCc
Q 009673          256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIF-FKKDPV  331 (529)
Q Consensus       256 i~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~-~~~~~~  331 (529)
                      +++.++||+  ..|+++|.++|+++|++||+|++|..|....+...  .  +|++++|+||+ .|+.| |+++ ++++  
T Consensus       164 ~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~--~--~d~~~~s~~K~-~g~~g~g~~~~~~~~--  236 (400)
T 3vax_A          164 SLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTT--P--IDMISISGHKI-GAPKGVGALVTRRRE--  236 (400)
T ss_dssp             ECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGS--C--CSEEEEETGGG-TSCSSCEEEEECBCS--
T ss_pred             EEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhh--c--CcEEEEeHHHh-CCCCceEEEEEecch--
Confidence            999888876  78999999999999999999999887654332111  1  78999999995 56765 8888 8762  


Q ss_pred             chhHHH---hhhccccc------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC
Q 009673          332 LGVELE---SAINNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS  402 (529)
Q Consensus       332 ~~~~l~---~~i~~~~~------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt  402 (529)
                         ++.   ..+.....      ....++++...++++..+++... .++++..+++.++++++.+.|+..|+.+..+..
T Consensus       237 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~  312 (400)
T 3vax_A          237 ---EMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFE-AEHAQWQVAAQDLRSRLLAGLASTSFQVNGDQD  312 (400)
T ss_dssp             ---SSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHH-HSHHHHHHHHHHHHHHHHHHHTTTTCEECSCTT
T ss_pred             ---hccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHhhCCCCEEEeCCcc
Confidence               111   11221111      11245667777777777777553 356788889999999999999856888775422


Q ss_pred             --CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCC----------CCCCC----CCeEEEcc-CCCccCCCCHHH
Q 009673          403 --DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD----------KSALV----PGGIRIGS-PAMTTRGFSEKE  465 (529)
Q Consensus       403 --~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~----------~~~~~----~~~iRig~-~~~tt~g~~~~d  465 (529)
                        ..+++++.+.  +.+..++.+.|. +||.++.+...+.          .....    ++.|||++ +..+    +++|
T Consensus       313 ~~~~~~~~~~~~--~~~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~----t~e~  385 (400)
T 3vax_A          313 HVVPHILNLSFE--DVDAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQA----TDLD  385 (400)
T ss_dssp             SBCTTEEEEECT--TCCHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC----------
T ss_pred             cCCCCEEEEEeC--CCCHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCC----CHHH
Confidence              1234444443  457788888888 9998854321000          00011    37899997 5443    4799


Q ss_pred             HHHHHHHHHHHHH
Q 009673          466 FVAIADFIHEGVE  478 (529)
Q Consensus       466 ~~~la~~i~~~~~  478 (529)
                      ++++++.|+++++
T Consensus       386 i~~~~~~l~~~~~  398 (400)
T 3vax_A          386 VEELARGVAKLKP  398 (400)
T ss_dssp             -------------
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999988764

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=99.94  E-value=2e-25  Score=239.78  Aligned_cols=328  Identities=14%  Similarity=0.117  Sum_probs=228.2

Q ss_pred             cHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHHHHhhcC---
Q 009673          115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAILK---  190 (529)
Q Consensus       115 ~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs~A~~~~l~all~---  190 (529)
                      ++.+.+++...+.. +....+.  .+...+...++|+.+++++++++|++ ...  ..+.+++|++|+..++.++++   
T Consensus        77 ~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~l~~~~~~~la~~~g~~~~~~--~~~~~~ggt~a~~~a~~a~~~~~~  151 (497)
T 3mc6_A           77 GDDLIHLQTIAYEK-YCVANQL--HPDVFPAVRKMESEVVSMVLRMFNAPSDTG--CGTTTSGGTESLLLACLSAKMYAL  151 (497)
T ss_dssp             CHHHHHHHHHHHHH-TSSCBTT--CTTTCHHHHHHHHHHHHHHHHHTTCCTTTC--CEEEESSHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHH-HhhcCCC--CcccChHHHHHHHHHHHHHHHHhCCCCCCC--eEEEcCcHHHHHHHHHHHHHHHHH
Confidence            46777777665543 2111111  12333456788888889999999998 221  134456667999999998865   


Q ss_pred             --CC---CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-
Q 009673          191 --PH---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-  264 (529)
Q Consensus       191 --pG---D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-  264 (529)
                        +|   |+|+++.+.|.++.        +.+...|.  +++.++++++++.+|+++|++++++ +|++|+++.++|++ 
T Consensus       152 ~~~g~~~~~Vi~~~~~h~~~~--------~~~~~~G~--~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG  220 (497)
T 3mc6_A          152 HHRGITEPEIIAPVTAHAGFD--------KAAYYFGM--KLRHVELDPTTYQVDLGKVKKFINK-NTVLLVGSAPNFPHG  220 (497)
T ss_dssp             HHSCCSSCEEEEETTSCHHHH--------HHHHHSCC--EEEEECBCTTTCSBCTTTTGGGCCS-SEEEEEEETTCTTTC
T ss_pred             hcCCCCCceEEEeCCccHHHH--------HHHHHcCC--eEEEEecCcccCcCCHHHHHHHHhh-CCEEEEEECCCCCCC
Confidence              56   99999988765432        23445565  6667777644689999999999987 79999999888765 


Q ss_pred             -CCCHHHHHHHHHHhCCEEEEeccccccccc----ccccCC-CC----CcccEEEecccccccCCCC-eEEEeeCCCcch
Q 009673          265 -DFDYPRMRQIADAVGALLMMDMAHISGLVA----ASVVAD-PF----KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLG  333 (529)
Q Consensus       265 -~~d~~~i~~ia~~~g~~livD~ah~~Gli~----~~~~~~-~~----~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~  333 (529)
                       ..|+++|+++|++||++|++|++|..+...    .+.... ++    .++|++++|+||++.||.+ |++++++     
T Consensus       221 ~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~-----  295 (497)
T 3mc6_A          221 IADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRN-----  295 (497)
T ss_dssp             CCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSS-----
T ss_pred             cCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecC-----
Confidence             789999999999999999999998754432    111111 12    2689999999999755554 9999987     


Q ss_pred             hHHHhhhcccccC----------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEecCC
Q 009673          334 VELESAINNAVFP----------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSGG  401 (529)
Q Consensus       334 ~~l~~~i~~~~~p----------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~~g  401 (529)
                       +..........+          ...|+.....+++++++++.+...+++++.+++.++++++.+.|++.  |++++.+.
T Consensus       296 -~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~  374 (497)
T 3mc6_A          296 -SDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNP  374 (497)
T ss_dssp             -HHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCC
T ss_pred             -HHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC
Confidence             333322211111          12334444456677777776666677889999999999999999984  89987542


Q ss_pred             CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          402 SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       402 t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      . ..++.+.  ..+++..++.+.|.+.||.++...        .+.++|+++..     .+++|++++++.|++++...
T Consensus       375 ~-~~~v~~~--~~~~~~~~l~~~L~~~Gi~v~~~~--------~~~~~ri~~~~-----~t~e~i~~~~~~L~~~l~~~  437 (497)
T 3mc6_A          375 R-YSVISFS--SKTLNIHELSDRLSKKGWHFNALQ--------KPVALHMAFTR-----LSAHVVDEICDILRTTVQEL  437 (497)
T ss_dssp             C-SSEEEEE--CTTTTHHHHHHHHHTTTCBCEECC--------SSCCEEEECCT-----TTTCTHHHHHHHHHHHHHHH
T ss_pred             C-eeEEEEe--CCCCCHHHHHHHHHhCCEEEecCC--------CCCeEEEEEeC-----CCHHHHHHHHHHHHHHHHHH
Confidence            2 2334443  335678889999999999875432        23478998762     35799999999999988754

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.94  E-value=5.4e-26  Score=236.23  Aligned_cols=332  Identities=17%  Similarity=0.130  Sum_probs=219.0

Q ss_pred             cceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673          103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF  182 (529)
Q Consensus       103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~  182 (529)
                      +.+++..+++.+++.+++++...+...+   |     ....+...+++    +.+++++|.+.     .+.+++|++|+.
T Consensus        23 ~~~~l~~~~p~~~~~~~~a~~~~~~~~~---~-----~~~~~~~~~l~----~~la~~~~~~~-----~i~~~~gt~al~   85 (391)
T 3dr4_A           23 DLPRISVAAPRLDGNERDYVLECMDTTW---I-----SSVGRFIVEFE----KAFADYCGVKH-----AIACNNGTTALH   85 (391)
T ss_dssp             -----CCCCCCCCSSHHHHHHHHHHHTC---C-----SSCSHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHH
T ss_pred             CCceeccCCCCCCHHHHHHHHHHHHcCC---c-----cCCChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHH
Confidence            4566666777788999999988776432   1     11234455555    67888899873     366789999999


Q ss_pred             HHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 009673          183 EVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA  261 (529)
Q Consensus       183 ~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~  261 (529)
                      .++.++ ++|||+|+++++.|.++..        .+...|.  +++.++++++++.+|+++|++.+++ ++++|+++++ 
T Consensus        86 ~~l~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~n~-  153 (391)
T 3dr4_A           86 LALVAMGIGPGDEVIVPSLTYIASAN--------SVTYCGA--TPVLVDNDPRTFNLDAAKLEALITP-RTKAIMPVHL-  153 (391)
T ss_dssp             HHHHHHTCCTTCEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTCSBCGGGSGGGCCT-TEEEECCBCG-
T ss_pred             HHHHHcCCCCcCEEEECCCchHHHHH--------HHHHCCC--EEEEEecCccccCcCHHHHHHhcCC-CceEEEEECC-
Confidence            999999 9999999999998866531        2334454  7777888767789999999999987 7888875432 


Q ss_pred             CCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEec--ccccccCCCCeEEEeeCCCcchhHHHhh
Q 009673          262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTT--THKSLRGPRGGMIFFKKDPVLGVELESA  339 (529)
Q Consensus       262 ~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S--~hK~l~GprgG~i~~~~~~~~~~~l~~~  339 (529)
                      .+...|+++|.++|+++|++||+|++|..|....+.....  ..|++++|  .||+++|++||+++++++     ++.+.
T Consensus       154 tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~--~~di~~~S~s~~K~l~~g~gg~~~~~~~-----~~~~~  226 (391)
T 3dr4_A          154 YGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGS--LGDCATFSFFGNAIITTGEGGMITTNDD-----DLAAK  226 (391)
T ss_dssp             GGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS--SSSEEEEECBTTSSSCCBSCEEEEESCH-----HHHHH
T ss_pred             CCChhhHHHHHHHHHHcCCEEEEECcccccceECCeeecc--cCCEEEEECCCCCcCCcCCeEEEEECCH-----HHHHH
Confidence            2337899999999999999999999998877654432222  23666665  669998888999988773     45544


Q ss_pred             hcccccCCC----------CCC-ChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC--C----C
Q 009673          340 INNAVFPGL----------QGG-PHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG--G----S  402 (529)
Q Consensus       340 i~~~~~p~~----------~g~-p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~--g----t  402 (529)
                      +......+.          .|. .....++   +++.......++++.++..++++++.+.|.+.|+.+...  .    .
T Consensus       227 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~---aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~  303 (391)
T 3dr4_A          227 MRLLRGQGMDPNRRYWFPIVGFNYRMTNIQ---AAIGLAQLERVDEHLAARERVVGWYEQKLARLGNRVTKPHVALTGRH  303 (391)
T ss_dssp             HHHHHBTTCCTTSTTCCSSCCCBCBCCHHH---HHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGGTTSEECCCCCTTSCC
T ss_pred             HHHHHhcCCCCCCcccccccccccCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccCcCCCCCCcc
Confidence            432211110          010 0111121   122211123456778888888999999998878776543  1    1


Q ss_pred             CCceEEEccCC-CCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCC--------------CCCeEEEccCCCccCCCCHHHH
Q 009673          403 DNHLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDK-SAL--------------VPGGIRIGSPAMTTRGFSEKEF  466 (529)
Q Consensus       403 ~~~~~~v~~~~-~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~--------------~~~~iRig~~~~tt~g~~~~d~  466 (529)
                      ..+++++.+.. .+++.+++.+.|.+.||.+.....|.+. +.+              ....|||++...    ++++|+
T Consensus       304 ~~~~~~i~~~~~~~~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~----~t~edi  379 (391)
T 3dr4_A          304 VFWMYTVRLGEGLSTTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAG----LTEADI  379 (391)
T ss_dssp             CCSSEEEEECSSCSSCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTT----CCHHHH
T ss_pred             eeEEEEEEECCccchhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCC----CCHHHH
Confidence            12234444432 2567788999999999998765433221 111              124689987643    569999


Q ss_pred             HHHHHHHHHHH
Q 009673          467 VAIADFIHEGV  477 (529)
Q Consensus       467 ~~la~~i~~~~  477 (529)
                      +++++.|++++
T Consensus       380 ~~~~~~l~~~l  390 (391)
T 3dr4_A          380 DRVIAALDQVL  390 (391)
T ss_dssp             HHHHHHHHTTC
T ss_pred             HHHHHHHHHHh
Confidence            99999997653

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=99.94  E-value=7.9e-25  Score=230.61  Aligned_cols=338  Identities=15%  Similarity=0.109  Sum_probs=223.9

Q ss_pred             cceeEecCCC------CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC-----CCCCCCcee
Q 009673          103 KSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-----LDENKWGVN  171 (529)
Q Consensus       103 ~~i~L~asen------~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g-----~~~~~~~~~  171 (529)
                      +.|+|..+..      ++++.|++++...+......+|+.      .....+++    +.++++++     ++.++   .
T Consensus        55 ~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr----~~la~~~~~~~~~~~~~~---v  121 (427)
T 3dyd_A           55 TMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAP------SIGFLSSR----EEIASYYHCPEAPLEAKD---V  121 (427)
T ss_dssp             CCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCC------TTCCHHHH----HHHHHHHCBTTBCCCGGG---E
T ss_pred             CEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCC------CCCcHHHH----HHHHHHHhhcCCCCChHH---E
Confidence            4588876552      578999999998876543334432      11223444    55666776     44442   1


Q ss_pred             eecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhc
Q 009673          172 VQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILF  250 (529)
Q Consensus       172 V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~  250 (529)
                      +...+|++|+..++.++++|||+|++++|.|.++..        .+...|.  +++.+++++ +++.+|++++++.+++ 
T Consensus       122 ~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~-  190 (427)
T 3dyd_A          122 ILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKT--------LAESMGI--EVKLYNLLPEKSWEIDLKQLEYLIDE-  190 (427)
T ss_dssp             EEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTC--EEEEEEEEGGGTTEECHHHHHSSCCT-
T ss_pred             EEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEEecccccCCCCCHHHHHHHhcc-
Confidence            334455699999999999999999999998765431        2334454  555666643 3578999999999987 


Q ss_pred             CCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCCC--ccc---EEEecccccc--cC
Q 009673          251 RPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCD---VVTTTTHKSL--RG  318 (529)
Q Consensus       251 ~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aD---iv~~S~hK~l--~G  318 (529)
                      ++++|++..++||+  ..+   +++|+++|+++|+++|+|++|. ++...+....++.  ..|   ++++|+||++  +|
T Consensus       191 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~-~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G  269 (427)
T 3dyd_A          191 KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYG-DMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPG  269 (427)
T ss_dssp             TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTT-TCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGG
T ss_pred             CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCch-hhccCCCcCccHHHhCCCCcEEEEeeccccCCCcC
Confidence            78999888888887  667   9999999999999999999954 4443332222221  122   6788999974  78


Q ss_pred             CCCeEEEeeCCCcc-hhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcE
Q 009673          319 PRGGMIFFKKDPVL-GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYK  396 (529)
Q Consensus       319 prgG~i~~~~~~~~-~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~  396 (529)
                      +|.|+++++++... ..++.+.+......  ..+++....+++..+|+......+++..+++.++++.+.+.|++. |+.
T Consensus       270 ~riG~~~~~~~~~~~~~~i~~~l~~~~~~--~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~  347 (427)
T 3dyd_A          270 WRLGWILIHDRRDIFGNEIRDGLVKLSQR--ILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLR  347 (427)
T ss_dssp             GCCEEEEEECSTTSSHHHHHHHHHHHHHH--HCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEE
T ss_pred             cceEEEEecCcchhhHHHHHHHHHHHHhc--cCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence            88999999863110 01344444322111  123445555566666765333445788889999999999999985 888


Q ss_pred             EecCCCCCceEEEccCC----CCCcHHHHHHh-HhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673          397 LVSGGSDNHLVLVDLRP----MGIDGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD  471 (529)
Q Consensus       397 v~~~gt~~~~~~v~~~~----~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~  471 (529)
                      ++.+. ...++++.+..    .+.+..++.+. ++++||.+..+..++     .++++||++.      .++++++++++
T Consensus       348 ~~~p~-~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~-----~~~~iRis~~------~~~e~i~~~l~  415 (427)
T 3dyd_A          348 PVRPS-GAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFE-----YPNFIRVVIT------VPEVMMLEACS  415 (427)
T ss_dssp             EECCS-BTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGT-----CTTEEEEESC------SCHHHHHHHHH
T ss_pred             ecCCC-eeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccC-----CCCeEEEEEC------CCHHHHHHHHH
Confidence            76542 34556665531    12455555544 478999985443221     3578999963      45899999999


Q ss_pred             HHHHHHHH
Q 009673          472 FIHEGVEI  479 (529)
Q Consensus       472 ~i~~~~~~  479 (529)
                      .|.++++.
T Consensus       416 ~l~~~l~~  423 (427)
T 3dyd_A          416 RIQEFCEQ  423 (427)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99988764

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=99.93  E-value=9.7e-25  Score=224.91  Aligned_cols=327  Identities=14%  Similarity=0.047  Sum_probs=220.7

Q ss_pred             hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-H
Q 009673          102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S  178 (529)
Q Consensus       102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s  178 (529)
                      ++.|+|..+++.  .++.+.+++...+.... .+|+.      .....++++...+++.+.+|.+.+.  .+|.+++| +
T Consensus        29 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~------~~~~~~l~~~la~~~~~~~g~~~~~--~~v~~~~g~~   99 (370)
T 2z61_A           29 KKVIHLEIGEPDFNTPKPIVDEGIKSLKEGK-THYTD------SRGILELREKISELYKDKYKADIIP--DNIIITGGSS   99 (370)
T ss_dssp             CCCEECCCCSCSSCCCHHHHHHHHHHHHTTC-CSCCC------TTCCHHHHHHHHHHHHHHSSCCCCG--GGEEEESSHH
T ss_pred             CCEEEccCCCCCCCCCHHHHHHHHHHHHcCc-cCCCC------CCCCHHHHHHHHHHHHHHhCCCCCh--hhEEECCChH
Confidence            356888777753  57899999988775421 22322      1223467766667777777754321  13444554 5


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      +|+..++.++++|||+|++.+|.|.++..        .+...|.  +++.++       +|+++|++.+++ ++++|+++
T Consensus       100 ~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~v~-------~d~~~l~~~l~~-~~~~v~~~  161 (370)
T 2z61_A          100 LGLFFALSSIIDDGDEVLIQNPCYPCYKN--------FIRFLGA--KPVFCD-------FTVESLEEALSD-KTKAIIIN  161 (370)
T ss_dssp             HHHHHHHHHHCCTTCEEEEESSCCTHHHH--------HHHHTTC--EEEEEC-------SSHHHHHHHCCS-SEEEEEEE
T ss_pred             HHHHHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEeC-------CCHHHHHHhccc-CceEEEEc
Confidence            99999999999999999999998865421        2233454  555544       789999999987 78999888


Q ss_pred             CCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC--CC---CcccEEEecccccc--cCCCCeEEEeeCC
Q 009673          259 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PF---KYCDVVTTTTHKSL--RGPRGGMIFFKKD  329 (529)
Q Consensus       259 ~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~---~~aDiv~~S~hK~l--~GprgG~i~~~~~  329 (529)
                      +++||+  ..+.+ |.++|++||+++|+|++|..+. ..+....  .+   .+.|++++|+||++  +|+|.|++++++ 
T Consensus       162 ~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~-~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-  238 (370)
T 2z61_A          162 SPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLV-YEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISND-  238 (370)
T ss_dssp             SSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCB-SSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCH-
T ss_pred             CCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcc-cCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECH-
Confidence            888875  77888 9999999999999999976543 2221111  11   14689999999997  577889999988 


Q ss_pred             CcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEE
Q 009673          330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV  409 (529)
Q Consensus       330 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v  409 (529)
                           ++.+.+......... +++....+++..+++......+++..+++.++++.+.+.|.+.|+++..+. .+++.++
T Consensus       239 -----~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~  311 (370)
T 2z61_A          239 -----EIIEAILKLQQNLFI-SAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNPI-GAYYVFP  311 (370)
T ss_dssp             -----HHHHHHHHHHHHHTS-SSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCCCCC-BTTEECC
T ss_pred             -----HHHHHHHHHHhhccc-CCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCC-cceEEEE
Confidence                 676666543222212 233334444444554311223467788888999999999988888776532 2455566


Q ss_pred             ccCCCCCcHHHHHHhHh-cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          410 DLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       410 ~~~~~~i~~~~~~~~L~-~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      ++..   +..++.+.|. ++||.+..+...+   ...++++||++.      .++++++++++.|.+++
T Consensus       312 ~~~~---~~~~~~~~l~~~~gi~v~~g~~f~---~~~~~~~Ri~~~------~~~~~i~~~~~~l~~~l  368 (370)
T 2z61_A          312 NIGE---DGREFAYKLLKEKFVALTPGIGFG---SKGKNYIRISYA------NSYENIKEGLERIKEFL  368 (370)
T ss_dssp             BCSS---CHHHHHHHHHHHHCEECEEGGGGC---GGGSSBEEEECC------SCHHHHHHHHHHHHHHH
T ss_pred             ecCC---CHHHHHHHHHHhCCEEEeCchhhC---CCCCCEEEEEEe------CCHHHHHHHHHHHHHHH
Confidence            6643   5667777774 7899986532221   112578999976      35799999999988765

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.93  E-value=8.9e-25  Score=226.84  Aligned_cols=335  Identities=14%  Similarity=0.127  Sum_probs=223.8

Q ss_pred             cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHH-HHHHHHHHHHHHcCC--CCCCCceeeecCCh
Q 009673          103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDE-LETLCQKRALAAFNL--DENKWGVNVQPLSG  177 (529)
Q Consensus       103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~-lE~~a~~~la~~~g~--~~~~~~~~V~~~sG  177 (529)
                      +.|+|..+++  .+++.|.+++...+.+. ..+|+.     +   ..+ +++...+++.+.+|.  +++    +|.+++|
T Consensus        29 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-----~---~~~~lr~~la~~l~~~~g~~~~~~----~v~~t~g   95 (390)
T 1d2f_A           29 DLLPFTISDMDFATAPCIIEALNQRLMHG-VFGYSR-----W---KNDEFLAAIAHWFSTQHYTAIDSQ----TVVYGPS   95 (390)
T ss_dssp             -CEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCCC-----S---CCHHHHHHHHHHHHHHSCCCCCGG----GEEEESC
T ss_pred             CeeEeeecCCCCCCCHHHHHHHHHHHhCC-CCCCCC-----C---ChHHHHHHHHHHHHHhcCCCCCHH----HEEEcCC
Confidence            5678876665  36799999998877432 123322     1   234 666666788878884  443    3555666


Q ss_pred             H-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC--CCCCCHHHHHHHhhhcCCcE
Q 009673          178 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAILFRPKL  254 (529)
Q Consensus       178 s-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~--~~~iD~d~le~~i~~~~pkl  254 (529)
                      + +|+..++.++++|||+|++.+|.|.++..        .+...|.  +++.++++++  ++.+|+++|++.+++.++++
T Consensus        96 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~  165 (390)
T 1d2f_A           96 VIYMVSELIRQWSETGEGVVIHTPAYDAFYK--------AIEGNQR--TVMPVALEKQADGWFCDMGKLEAVLAKPECKI  165 (390)
T ss_dssp             HHHHHHHHHHHSSCTTCEEEEEESCCHHHHH--------HHHHTTC--EEEEEECEECSSSEECCHHHHHHHHTSTTEEE
T ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCcHHHHH--------HHHHCCC--EEEEeecccCCCccccCHHHHHHHhccCCCeE
Confidence            5 89999999999999999999987755421        2234454  5566666533  24699999999997657899


Q ss_pred             EEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC---CC-c-ccEEEecccccc--cCCCCe
Q 009673          255 IIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK-Y-CDVVTTTTHKSL--RGPRGG  322 (529)
Q Consensus       255 Ii~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~~-~-aDiv~~S~hK~l--~GprgG  322 (529)
                      |+++.++||+  ..+   +++|.++|++||+++|+|++|..+ ...+....+   +. . .|. ++|+||++  +|.|.|
T Consensus       166 v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~-~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G  243 (390)
T 1d2f_A          166 MLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDM-VWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGA  243 (390)
T ss_dssp             EEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTC-BCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCE
T ss_pred             EEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhhe
Confidence            9888888886  334   899999999999999999997643 322221111   11 2 277 99999987  678889


Q ss_pred             EEEeeCCCcchhHHHhhhccccc-CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-c-CcEEec
Q 009673          323 MIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-L-GYKLVS  399 (529)
Q Consensus       323 ~i~~~~~~~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~-G~~v~~  399 (529)
                      +++++++     ++.+.+..... ....++++....+++..+++.. ...+++..+++.++++.+.+.|++ . |+.+..
T Consensus       244 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~  317 (390)
T 1d2f_A          244 YGIIENS-----SSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQG-APWLDALRIYLKDNLTYIADKMNAAFPELNWQI  317 (390)
T ss_dssp             EEEECSH-----HHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCC
T ss_pred             EEEECCH-----HHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEec
Confidence            9998643     56666544322 1122344454555555566642 223467788888999999999987 3 777654


Q ss_pred             CCCCCceEEEccCCCCCcHHHHHHhHh-cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          400 GGSDNHLVLVDLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       400 ~gt~~~~~~v~~~~~~i~~~~~~~~L~-~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      + ..+++.++++...+++..++.+.|. ++||.+..+...+   +..++++||++..      ++++++++++.|.+++.
T Consensus       318 ~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~---~~~~~~~Ris~~~------~~~~l~~~l~~l~~~l~  387 (390)
T 1d2f_A          318 P-QSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYG---EEGRGFVRLNAGC------PRSKLEKGVAGLINAIR  387 (390)
T ss_dssp             C-SBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGC---GGGTTEEEEECCS------CHHHHHHHHHHHHHHHH
T ss_pred             C-CccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccC---CCCCCeEEEEecC------CHHHHHHHHHHHHHHHH
Confidence            3 2345556777533356677777776 7899986532211   1235789999753      36888888888888765

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=99.93  E-value=3.7e-24  Score=227.24  Aligned_cols=339  Identities=9%  Similarity=0.001  Sum_probs=226.4

Q ss_pred             CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCC--CceeeecCChHHHHHHHHHhhc
Q 009673          112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENK--WGVNVQPLSGSPANFEVYTAIL  189 (529)
Q Consensus       112 n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~--~~~~V~~~sGs~A~~~~l~all  189 (529)
                      .+.++.+.+++...+..... +      +...+...++|+.+++++++++|++.++  ...-+..++|++|+..++.++.
T Consensus        52 ~~~~~~v~e~~~~a~~~~~~-~------~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~  124 (452)
T 2dgk_A           52 TWDDENVHKLMDLSINKNWI-D------KEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMK  124 (452)
T ss_dssp             CCCCHHHHHHHHHTTTCBTT-C------TTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHhccCCC-C------hhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHH
Confidence            35678899999877643211 1      1122446688888999999999998753  1112344566699999988875


Q ss_pred             C--------CC-----CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673          190 K--------PH-----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII  256 (529)
Q Consensus       190 ~--------pG-----D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi  256 (529)
                      +        +|     |+|++++ .|....        +.+...|.  +++.++++++++.+|+++|++++++ +|++|+
T Consensus       125 ~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~--------~~~~~~G~--~v~~v~~~~~~~~~d~~~l~~~i~~-~t~~v~  192 (452)
T 2dgk_A          125 WRWRKRMEAAGKPTDKPNLVCGP-VQICWH--------KFARYWDV--ELREIPMRPGQLFMDPKRMIEACDE-NTIGVV  192 (452)
T ss_dssp             HHHHHHHHHTTCCCSCCEEEESS-CCHHHH--------HHHHHTTC--EEEECCCBTTBCSCCHHHHHHHCCT-TEEEEE
T ss_pred             HHHHHHHHhcCCCCCCcEEEECC-CcHHHH--------HHHHHcCc--eEEEEecCCCCCeECHHHHHHHHhh-CCEEEE
Confidence            4        66     5898877 553221        23345565  7777777744689999999999987 789999


Q ss_pred             EcCCCCCC--CCCHHHHHHHHHHh------CCEEEEeccccccccc--ccccCCC--CCcccEEEeccccccc-CCCCeE
Q 009673          257 AGASAYPR--DFDYPRMRQIADAV------GALLMMDMAHISGLVA--ASVVADP--FKYCDVVTTTTHKSLR-GPRGGM  323 (529)
Q Consensus       257 ~~~s~~p~--~~d~~~i~~ia~~~------g~~livD~ah~~Gli~--~~~~~~~--~~~aDiv~~S~hK~l~-GprgG~  323 (529)
                      ++.++|++  ..|+++|.++|+++      |+++++|++|..+...  .+..+..  ..++|++++++||++. +++.|+
T Consensus       193 ~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~  272 (452)
T 2dgk_A          193 PTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGW  272 (452)
T ss_dssp             CBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEE
T ss_pred             EEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCCeEE
Confidence            88877765  78999999999996      9999999997655431  1111111  2378999999999874 456699


Q ss_pred             EEeeCCCcchhHHH-hhhccc-ccC-------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-
Q 009673          324 IFFKKDPVLGVELE-SAINNA-VFP-------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-  393 (529)
Q Consensus       324 i~~~~~~~~~~~l~-~~i~~~-~~p-------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-  393 (529)
                      ++++++     ++. +.+... .+.       ...++......+++..+++.+...++.+..++..++++++.+.|++. 
T Consensus       273 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~  347 (452)
T 2dgk_A          273 VIWRDE-----EALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLG  347 (452)
T ss_dssp             EEESSG-----GGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             EEEcCH-----HHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            999763     222 222110 010       12333333344455556655444567888999999999999999985 


Q ss_pred             CcEEecCC---CCCceEEEccCCC---CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673          394 GYKLVSGG---SDNHLVLVDLRPM---GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV  467 (529)
Q Consensus       394 G~~v~~~g---t~~~~~~v~~~~~---~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~  467 (529)
                      |++++.++   ...+++.+.+...   .++..++.+.|.+.||.+.....|...  ...+.+||++...+    +++|++
T Consensus       348 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~--~~~~~lRis~~~~~----t~e~id  421 (452)
T 2dgk_A          348 PYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEA--TDIVVMRIMCRRGF----EMDFAE  421 (452)
T ss_dssp             SEEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTC--TTCEEEEEECCTTC----CHHHHH
T ss_pred             CeEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHHhcCCeeeeeeCCccc--CCeEEEEEEecCCC----CHHHHH
Confidence            58887542   2234455544331   245578888898899976432223221  12457999976543    589999


Q ss_pred             HHHHHHHHHHHHH
Q 009673          468 AIADFIHEGVEIT  480 (529)
Q Consensus       468 ~la~~i~~~~~~~  480 (529)
                      ++++.|++++...
T Consensus       422 ~li~~l~~~~~~~  434 (452)
T 2dgk_A          422 LLLEDYKASLKYL  434 (452)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999887643

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=99.93  E-value=4e-25  Score=230.94  Aligned_cols=342  Identities=16%  Similarity=0.068  Sum_probs=224.6

Q ss_pred             hcceeEecCCC-----CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC
Q 009673          102 FKSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS  176 (529)
Q Consensus       102 ~~~i~L~asen-----~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s  176 (529)
                      ++.|+|..+++     ..++.+++++...+.+.+ .+|+.      .....++++...+++.+.+|++.+.  .+|.+++
T Consensus        38 ~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~------~~g~~~l~~~la~~l~~~~g~~~~~--~~v~~t~  108 (406)
T 1xi9_A           38 IKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGH-NYYGD------SEGLPELRKAIVEREKRKNGVDITP--DDVRVTA  108 (406)
T ss_dssp             CCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTC-CSCCC------TTCCHHHHHHHHHHHHHHHCCCCCG--GGEEEES
T ss_pred             CCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCcHHHHHHHHHHHHHhcCCCCCH--HHEEEcC
Confidence            35688877766     457899999988775432 12322      1223466766667887777765321  2455566


Q ss_pred             hH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcE
Q 009673          177 GS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKL  254 (529)
Q Consensus       177 Gs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pkl  254 (529)
                      |+ +|+..++.++++|||+|++++|.|.++.        ..+...|.  +++.+++++ +++.+|+++|++.+++ ++++
T Consensus       109 g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~  177 (406)
T 1xi9_A          109 AVTEALQLIFGALLDPGDEILVPGPSYPPYT--------GLVKFYGG--KPVEYRTIEEEDWQPDIDDIRKKITD-RTKA  177 (406)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEEEESCCHHHH--------HHHHHTTC--EEEEEEEEGGGTSEECHHHHHHHCCT-TEEE
T ss_pred             ChHHHHHHHHHHhCCCCCEEEEcCCCCccHH--------HHHHHcCC--EEEEeecCCCcCCcCCHHHHHHhhCc-CceE
Confidence            65 9999999999999999999999875432        12334554  566666654 3567899999999987 7899


Q ss_pred             EEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCC--C-Ccc-cEEEecccccc--cCCCCeE
Q 009673          255 IIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--F-KYC-DVVTTTTHKSL--RGPRGGM  323 (529)
Q Consensus       255 Ii~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~--~-~~a-Div~~S~hK~l--~GprgG~  323 (529)
                      |++++++||+  ..   ++++|.++|+++|+++|+|++|..+. ..+.....  + ... |++++|+||++  +|+|.|+
T Consensus       178 v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  256 (406)
T 1xi9_A          178 IAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMT-YEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGY  256 (406)
T ss_dssp             EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCB-SSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEE
T ss_pred             EEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccc-cCCCCCCHHHcCCCceEEEEeccccccCCCccEEEE
Confidence            9888888876  33   48999999999999999999976543 22111110  1 235 78999999998  4778899


Q ss_pred             EE--eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecC
Q 009673          324 IF--FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG  400 (529)
Q Consensus       324 i~--~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~  400 (529)
                      ++  .+++.  ..++.+.+....... . +++....+++..+++.. ...+++..+++.++++.+.+.|++. |+.+..+
T Consensus       257 ~~~~~~~~~--~~~l~~~l~~~~~~~-~-~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~  331 (406)
T 1xi9_A          257 MYFVDPENK--LSEVREAIDRLARIR-L-CPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYKRLNEIPGISTTKP  331 (406)
T ss_dssp             EEEECTTCT--THHHHHHHHHHHHHT-C-CSCSHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCC
T ss_pred             EEEecCchh--HHHHHHHHHHHHHhh-c-CCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecC
Confidence            98  66510  002444443221111 1 22333344444566532 2335777888899999999999885 8877653


Q ss_pred             CCCCceEEEccCCC-CCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          401 GSDNHLVLVDLRPM-GIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       401 gt~~~~~~v~~~~~-~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                       ..+.+.++++... +.+..++.+.| +++||.+..+...+   ...++++||++.      .++++++++++.|.++++
T Consensus       332 -~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~---~~~~~~lRis~~------~~~~~i~~~~~~l~~~l~  401 (406)
T 1xi9_A          332 -QGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFG---EYGAGHFRAVFL------PPIEILEEAMDRFEKFMK  401 (406)
T ss_dssp             -CBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGC---GGGTTBEEEECC------SCHHHHHHHHHHHHHHHH
T ss_pred             -CeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcC---CCCCCEEEEEec------CCHHHHHHHHHHHHHHHH
Confidence             2244455565421 45667777666 48999985432221   112578999975      458999999999988875


Q ss_pred             H
Q 009673          479 I  479 (529)
Q Consensus       479 ~  479 (529)
                      .
T Consensus       402 ~  402 (406)
T 1xi9_A          402 E  402 (406)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=99.93  E-value=2.8e-25  Score=232.28  Aligned_cols=338  Identities=15%  Similarity=0.087  Sum_probs=225.2

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.|+|..+++.  .++.|++++...+.+....+|+.      .....++++...+++.+.+|++.+.. .+|.+++|+ +
T Consensus        48 ~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr~~ia~~~~~~~g~~~~~~-~~v~~t~G~~~  120 (404)
T 2o1b_A           48 PLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGA------FHGKEAFKQAIVDFYQRQYNVTLDKE-DEVCILYGTKN  120 (404)
T ss_dssp             CCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCC------TTCCHHHHHHHHHHHHHHHCCCCCTT-TSEEEESSHHH
T ss_pred             CEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCCc-ccEEEcCCcHH
Confidence            45788777754  57899999987764321123332      11134666666677777779762100 134445654 8


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      |+..++.++++|||+|++.+|.|.++..        .+...|.  +++.++++++++.+|+++|++.+++ ++++|+++.
T Consensus       121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~  189 (404)
T 2o1b_A          121 GLVAVPTCVINPGDYVLLPDPGYTDYLA--------GVLLADG--KPVPLNLEPPHYLPDWSKVDSQIID-KTKLIYLTY  189 (404)
T ss_dssp             HHHHHHHHHCCTTCEEEEEESCCSSHHH--------HHHHTTC--EEEEEECCTTTCCCCGGGSCHHHHH-HEEEEEECS
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHCCC--EEEEeccCcccCcCCHHHHHHhhcc-CceEEEEcC
Confidence            9999999999999999999998765431        2234454  6666666654567899999998876 789999988


Q ss_pred             CCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCC--CC---cccEEEecccccc--cCCCCeEEEee
Q 009673          260 SAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FK---YCDVVTTTTHKSL--RGPRGGMIFFK  327 (529)
Q Consensus       260 s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~--~~---~aDiv~~S~hK~l--~GprgG~i~~~  327 (529)
                      ++||+  ..   ++++|.++|+++|++||+|++|..+ ...+.....  +.   ..+++++|+||++  +|+|.|+++++
T Consensus       190 p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~-~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~  268 (404)
T 2o1b_A          190 PNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAF-GFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGN  268 (404)
T ss_dssp             SCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTC-BSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEEC
T ss_pred             CCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhc-ccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecC
Confidence            88876  44   4788999999999999999997643 322211111  11   3468999999998  57888999997


Q ss_pred             CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673          328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV  407 (529)
Q Consensus       328 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~  407 (529)
                      +      ++.+.+........ .+++....+++..+|+.. ...+++..+++.++++.+.+.|++.|+.+..+. .+.++
T Consensus       269 ~------~~~~~l~~~~~~~~-~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~g~~~  339 (404)
T 2o1b_A          269 K------DMIQALKKYQTHTN-AGMFGALQDAAIYALNHY-DDFLEEQSNVFKTRRDRFEAMLAKADLPFVHAK-GGIYV  339 (404)
T ss_dssp             H------HHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCEECCC-BSSEE
T ss_pred             H------HHHHHHHHHHhhcc-CCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCC-cceEE
Confidence            7      67666654322111 233444444445566542 234577788888999999999998888876542 24556


Q ss_pred             EEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ++++. .+++..++.+.| +++||.+..+...+   ...++++||++..      ++++++++++.|.++++
T Consensus       340 ~~~~~-~~~~~~~l~~~l~~~~gi~v~~g~~f~---~~~~~~iRis~~~------~~e~l~~~l~~l~~~l~  401 (404)
T 2o1b_A          340 WLETP-PGYDSEQFEQFLVQEKSILVAPGKPFG---ENGNRYVRISLAL------DDQKLDEAAIRLTELAY  401 (404)
T ss_dssp             EEECC-TTCCHHHHHHHHHHHHCEECEESGGGC---GGGTTEEEEECCS------CTTHHHHHHHHHHGGGG
T ss_pred             EEeCC-CCCCHHHHHHHHHHHCCEEEeCchhhC---cCCCCeEEEEEcC------CHHHHHHHHHHHHHHHH
Confidence            77774 345666666665 57899986532221   1135789999753      36788888888876653

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.93  E-value=5.9e-25  Score=225.84  Aligned_cols=331  Identities=13%  Similarity=0.080  Sum_probs=216.7

Q ss_pred             ceeEecCCCCCcHHHHHHHhhhhhccCCCCCC-CCCCCCCchhHHHHHHHHHHHHHHHcCCCCC-CCceeeecCCh-HHH
Q 009673          104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDEN-KWGVNVQPLSG-SPA  180 (529)
Q Consensus       104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p-~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~-~~~~~V~~~sG-s~A  180 (529)
                      .+.+.+++.++|+.|++++...+.+.+..|.. ....+.+..+ .++.+.+++++++++|++.+ +  + |.+++| ++|
T Consensus         5 ~~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~la~~~g~~~~~~--~-i~~t~g~t~a   80 (362)
T 2c0r_A            5 AYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVY-EAVHNEAQARLLALLGNPTGYK--V-LFIQGGASTQ   80 (362)
T ss_dssp             CEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHH-HHHHHHHHHHHHHHTTCCSSEE--E-EEESSHHHHH
T ss_pred             eeeccCCCCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHH-HHHHHHHHHHHHHHhCCCCCcE--E-EEECCCchHH
Confidence            46777888889999999999887543222111 0001112223 33444677999999999753 2  1 344554 599


Q ss_pred             HHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       181 ~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      +..++.++++|||+|+++++.+.++.   +.   ..+...| ....++++.+. .+..+|.++++  +++ +||+|++++
T Consensus        81 ~~~~~~~l~~~gd~vl~~~~~~~~~~---~~---~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~-~t~~v~~~~  150 (362)
T 2c0r_A           81 FAMIPMNFLKEGQTANYVMTGSWASK---AL---KEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQD-NAAYLHLTS  150 (362)
T ss_dssp             HHHHHHHHCCTTCEEEEEECSHHHHH---HH---HHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCT-TEEEEEEES
T ss_pred             HHHHHHhcCCCCCeEEEEecCcHhHH---HH---HHHHHhC-CeEEEecccccccccCCCHHHcc--cCC-CcCEEEEeC
Confidence            99999999999999998865432221   10   1122234 34444432111 12246776654  555 789999988


Q ss_pred             CCCCC---CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhH
Q 009673          260 SAYPR---DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVE  335 (529)
Q Consensus       260 s~~p~---~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~  335 (529)
                      ++||+   ..|+++|      +|+++++|++|..|....     .+...|++++|+||++ ||.| |++++++      +
T Consensus       151 ~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~-----~~~~~d~~~~s~~K~~-g~~G~G~l~~~~------~  212 (362)
T 2c0r_A          151 NETIEGAQFKAFPDT------GSVPLIGDMSSDILSRPF-----DLNQFGLVYAGAQKNL-GPSGVTVVIVRE------D  212 (362)
T ss_dssp             EETTTTEECSSCCCC------TTSCEEEECTTTTTSSCC-----CGGGCSEEEEETTTTT-CCSSCEEEEEEG------G
T ss_pred             CcCccceeccccccc------CCCEEEEEChhhccCCcc-----chhHCcEEEEeccccc-cCcCcEEEEEcH------H
Confidence            77776   2466665      899999999988764321     2333489999999999 6878 9999988      4


Q ss_pred             HHhhhcccc-----------cCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcC-c-EEecCC
Q 009673          336 LESAINNAV-----------FPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG-Y-KLVSGG  401 (529)
Q Consensus       336 l~~~i~~~~-----------~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G-~-~v~~~g  401 (529)
                      +.+.+....           .....++++...++++..+++.+... ++++..+++.++++++.+.|++.| + ++..+.
T Consensus       213 ~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~  292 (362)
T 2c0r_A          213 LVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDV  292 (362)
T ss_dssp             GSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCG
T ss_pred             HHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCCh
Confidence            544443210           00124577777788888888865443 568888999999999999999887 6 775321


Q ss_pred             --CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          402 --SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       402 --t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                        .....+++.+. .+.+..++.+.|++.||.+    .||...   .++|||++...+    +++|++++++.|+++++
T Consensus       293 ~~~~~~~~~~~~~-~~~~~~~~~~~L~~~gi~~----~~g~~~---~~~iRis~~~~~----~~e~i~~l~~~l~~~~~  359 (362)
T 2c0r_A          293 DSRSDMNITFRLA-SEELEKEFVKASEQEGFVG----LKGHRS---VGGLRASIYNAV----PYESCEALVQFMEHFKR  359 (362)
T ss_dssp             GGBCSSEEEEECS-CHHHHHHHHHHHHHTTEES----CBCCTT---TCSEEEECCTTS----CHHHHHHHHHHHHHHHH
T ss_pred             HHcCCcEEEEEcC-CcchHHHHHHHHHHCCCee----ccCCCC---CCEEEEECCCCC----CHHHHHHHHHHHHHHHH
Confidence              11234455553 2335667888899999976    344321   467999986543    48999999999988765

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=99.93  E-value=2.1e-24  Score=224.15  Aligned_cols=333  Identities=14%  Similarity=0.092  Sum_probs=222.8

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC---CCCCceeeecCCh
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD---ENKWGVNVQPLSG  177 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~---~~~~~~~V~~~sG  177 (529)
                      +.|+|..+++.  +++.|++++...+...  .+|+..   .|   ..++++...+++.+.+|.+   ++.   +|.+++|
T Consensus        31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~~---~g---~~~lr~~la~~l~~~~g~~~~~~~~---~i~~t~g   99 (396)
T 3jtx_A           31 EAVPLHIGEPKHPTPKVITDALTASLHEL--EKYPLT---AG---LPELRQACANWLKRRYDGLTVDADN---EILPVLG   99 (396)
T ss_dssp             CCEECSCCSCCSCCCHHHHHHHHHTGGGG--GSCCCT---TC---CHHHHHHHHHHHHHHTTTCCCCTTT---SEEEESS
T ss_pred             CeEEeCCcCCCCCCCHHHHHHHHHHhhhc--cCCCCC---CC---cHHHHHHHHHHHHHhcCCCCCCCCC---eEEEcCC
Confidence            56888877763  5799999998776422  234331   11   2456666668888888964   430   3444665


Q ss_pred             H-HHHHHHHHhhcCCC-----CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcC
Q 009673          178 S-PANFEVYTAILKPH-----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR  251 (529)
Q Consensus       178 s-~A~~~~l~all~pG-----D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~  251 (529)
                      + +|+..++.++++||     |+|++.+|.|.++..        .+...|.  +++.++++.+++.+|+++|++.+++ +
T Consensus       100 ~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~~~g~~~d~~~l~~~~~~-~  168 (396)
T 3jtx_A          100 SREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEG--------ATLLGGG--EIHFANCPAPSFNPDWRSISEEVWK-R  168 (396)
T ss_dssp             HHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHH--------HHHHTTC--EEEEEECCTTTCCCCGGGSCHHHHH-T
T ss_pred             cHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHH--------HHHHcCC--EEEEeecCCCCCccCHHHHHHhhcc-C
Confidence            5 99999999999997     799999987754321        2334554  6666666655678999999999988 8


Q ss_pred             CcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC----------CcccEEEecccccc
Q 009673          252 PKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF----------KYCDVVTTTTHKSL  316 (529)
Q Consensus       252 pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~----------~~aDiv~~S~hK~l  316 (529)
                      +++|+++.++||+  ..+   +++|.++|++||+++|+|++|.. +...+..+...          ...++++.|+||++
T Consensus       169 ~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  247 (396)
T 3jtx_A          169 TKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSE-IYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRS  247 (396)
T ss_dssp             EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTT-CCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTS
T ss_pred             cEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCchHHhhhhhcccccCcEEEEecccccc
Confidence            9999998888886  444   55689999999999999999653 33332111110          13568999999964


Q ss_pred             --cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC
Q 009673          317 --RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG  394 (529)
Q Consensus       317 --~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G  394 (529)
                        +|.|.|++++++      ++.+.+....... ..+++....+++..+++.  ...+.+..+++.++++.+.+.|.+. 
T Consensus       248 ~~~G~r~G~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-  317 (396)
T 3jtx_A          248 NVPGLRSGFVAGDA------ELLKNFLLYRTYH-GSAMSIPVQRASIAAWDD--EQHVIDNRRLYQEKFERVIPILQQV-  317 (396)
T ss_dssp             SCGGGCCEEEEECH------HHHHHHHHHHHHH-TCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHTTT-
T ss_pred             CCcccceEEEEeCH------HHHHHHHHHHhhc-ccCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence              788899999877      6766665432211 123344444444455653  3445777888888899999998764 


Q ss_pred             cEEecCCCCCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCC---CCCCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673          395 YKLVSGGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVAIA  470 (529)
Q Consensus       395 ~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~---~~~~~~~iRig~~~~tt~g~~~~d~~~la  470 (529)
                      +.+..+ ..++++|+++..  .+..++.+.| +++||.+..+..++..   .+...+++||++..      +++++++++
T Consensus       318 ~~~~~~-~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~------~~~~i~~~l  388 (396)
T 3jtx_A          318 FDVKLP-DASFYIWLKVPD--GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA------DVATCVKAA  388 (396)
T ss_dssp             SCCCCC-SSSSEEEEECTT--SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS------CHHHHHHHH
T ss_pred             CCccCC-CeeEEEEEECCC--CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC------CHHHHHHHH
Confidence            333333 235667777753  3556665555 7789999654432211   12346799999642      589999999


Q ss_pred             HHHHHHH
Q 009673          471 DFIHEGV  477 (529)
Q Consensus       471 ~~i~~~~  477 (529)
                      +.|.+++
T Consensus       389 ~~l~~~l  395 (396)
T 3jtx_A          389 EDIVSLY  395 (396)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHHh
Confidence            9988754

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=99.93  E-value=2e-24  Score=224.08  Aligned_cols=321  Identities=13%  Similarity=0.105  Sum_probs=213.3

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCCC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH  192 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~pG  192 (529)
                      +++++++++...+.... .+     |+. .+...+++    +.+++++|.+.     .|.++||++|+..++.++ ++||
T Consensus        15 ~~~~~~~a~~~~l~~~~-~~-----~~~-~~~~~~l~----~~la~~~~~~~-----~i~~~sGt~al~~~l~~l~~~~g   78 (388)
T 1b9h_A           15 YDDAERNGLVRALEQGQ-WW-----RMG-GDEVNSFE----REFAAHHGAAH-----ALAVTNGTHALELALQVMGVGPG   78 (388)
T ss_dssp             CCHHHHHHHHHHHHTSC-CB-----TTT-CSHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHHHHHHTTCCTT
T ss_pred             CCHHHHHHHHHHHHcCC-ee-----ecC-CHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCCc
Confidence            34899999988876421 01     122 23345555    67888999863     466799999999999999 8999


Q ss_pred             CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHH
Q 009673          193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPR  270 (529)
Q Consensus       193 D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p--~~~d~~~  270 (529)
                      |+|++++++|.+...        .+...|.  +++.++++++++.+|+++|++.+++ ++++|+   ++|+  ...|+++
T Consensus        79 d~Vi~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~---~~n~tG~~~~l~~  144 (388)
T 1b9h_A           79 TEVIVPAFTFISSSQ--------AAQRLGA--VTVPVDVDAATYNLDPEAVAAAVTP-RTKVIM---PVHMAGLMADMDA  144 (388)
T ss_dssp             CEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTCCBCHHHHHHHCCT-TEEEEC---CBCGGGCCCCHHH
T ss_pred             CEEEECCCccHHHHH--------HHHHcCC--EEEEEecCCCcCCCCHHHHHHhcCc-CceEEE---EeCCccCcCCHHH
Confidence            999999998765531        2334454  7778888766688999999999976 788877   4444  3789999


Q ss_pred             HHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCeEEEeeCCCcchhHH--HhhhcccccC--
Q 009673          271 MRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVEL--ESAINNAVFP--  346 (529)
Q Consensus       271 i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l--~~~i~~~~~p--  346 (529)
                      |.++|+++|++||+|++|+.|....+.....+..+++.++|.||+++|+++|+++++++     .+  .+.+......  
T Consensus       145 i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~~i~~~S~s~~K~l~g~~~G~~~~~~~-----~~~~~~~~~~~~~~~~  219 (388)
T 1b9h_A          145 LAKISADTGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDG-----ETEKYETAFLRHSCGR  219 (388)
T ss_dssp             HHHHHHHHTCCBCEECTTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTT-----CHHHHHHHHHHTBTTC
T ss_pred             HHHHHHHcCCEEEEecchhcCCccCCeecccccceEEEEccCCCcccCCCeEEEEECCH-----HHHHHHHHHHHHhCCC
Confidence            99999999999999999988766533211111123455555669998999999999874     24  3333211100  


Q ss_pred             ---------CCCCC---ChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCC-----CCCceEE
Q 009673          347 ---------GLQGG---PHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG-----SDNHLVL  408 (529)
Q Consensus       347 ---------~~~g~---p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~g-----t~~~~~~  408 (529)
                               ...|+   ++....+++..++     ..+++..+++.++++++.+.|++. |+.+..+.     ...++++
T Consensus       220 ~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~-----~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~  294 (388)
T 1b9h_A          220 PRDDRRYFHKIAGSNMRLNEFSASVLRAQL-----ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAM  294 (388)
T ss_dssp             CTTCSSCCCCSCCCBCBCBHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEE
T ss_pred             CccCccceeecccccCCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEE
Confidence                     01122   2322322221122     234667788888999999999885 88876421     1245667


Q ss_pred             EccCCCC-CcHHHHHHhHhcCCeEEcCCCCCCCCCC------------------C------CCCeEEEccCCCccCCC-C
Q 009673          409 VDLRPMG-IDGARVEKILDMASITLNKNSVPGDKSA------------------L------VPGGIRIGSPAMTTRGF-S  462 (529)
Q Consensus       409 v~~~~~~-i~~~~~~~~L~~~GI~v~~~~~Pg~~~~------------------~------~~~~iRig~~~~tt~g~-~  462 (529)
                      +.+.... .+.+++.+.|.++||.++.++.|.+..+                  +      ..+.|||++...    + +
T Consensus       295 ~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~----~~t  370 (388)
T 1b9h_A          295 FRIPGLTEERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVL----LAG  370 (388)
T ss_dssp             EECTTCCHHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGG----GSC
T ss_pred             EEeCCcCcccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCC----CCC
Confidence            7775311 2456788888889999976543321100                  0      013589987543    4 5


Q ss_pred             HHHHHHHHHHHHHHHH
Q 009673          463 EKEFVAIADFIHEGVE  478 (529)
Q Consensus       463 ~~d~~~la~~i~~~~~  478 (529)
                      ++|++++++.|+++++
T Consensus       371 ~edi~~~~~~l~~~~~  386 (388)
T 1b9h_A          371 EPELHATAEIIADAVA  386 (388)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            8999999999998775

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=99.93  E-value=4e-24  Score=224.98  Aligned_cols=350  Identities=15%  Similarity=0.157  Sum_probs=215.6

Q ss_pred             cceeEecCCC-CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-HHH
Q 009673          103 KSLELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPA  180 (529)
Q Consensus       103 ~~i~L~asen-~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s~A  180 (529)
                      +.+.|..+++ ++|+.|++++...+.+.+  +||...|..+... .+....+++++++++|++++    +|.+++| ++|
T Consensus        18 ~~~~Ld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~a   90 (432)
T 3a9z_A           18 RKVYMDYNATTPLEPEVIQAVTEAMKEAW--GNPSSSYVAGRKA-KDIINTARASLAKMIGGKPQ----DIIFTSGGTES   90 (432)
T ss_dssp             CCEECBTTTCCCCCHHHHHHHHHHHHHCC--SCTTCSSHHHHHH-HHHHHHHHHHHHHHHTCCGG----GEEEESCHHHH
T ss_pred             CcEEeeCCccCCCCHHHHHHHHHHHHHhc--CCCccCcHHHHHH-HHHHHHHHHHHHHHcCCCcC----eEEEeCChHHH
Confidence            4567765554 679999999998876533  4555443222222 23334566899999999764    3444565 599


Q ss_pred             HHHHHHhhc--------CCCCEEEEcCCCCCccc-------cccccc--cccccccccceEEEEEcccCCCCCCCCHHHH
Q 009673          181 NFEVYTAIL--------KPHDRIMGLDLPHGGHL-------SHGFMT--PKRRVSGTSIYFESMPYRLDESTGLVDYDML  243 (529)
Q Consensus       181 ~~~~l~all--------~pGD~Vl~~~~~~~g~~-------s~g~~~--~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~l  243 (529)
                      +..++.+++        +|||+|++++|.+.+..       .|....  ........|.  +++.++++++++.+|+++|
T Consensus        91 ~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~--~v~~v~~~~~~~~~d~~~l  168 (432)
T 3a9z_A           91 NNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVA--EVTFVPVSKVNGQVEVEDI  168 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSC--EEEEECCCTTTSSCCHHHH
T ss_pred             HHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCc--EEEEEecCcccCCcCHHHH
Confidence            999998886        59999999998775420       000000  0000011343  6677777644678999999


Q ss_pred             HHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhC----------CEEEEecccccccccccccCCCCCcccEEEec
Q 009673          244 EKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVG----------ALLMMDMAHISGLVAASVVADPFKYCDVVTTT  311 (529)
Q Consensus       244 e~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g----------~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S  311 (529)
                      ++.+++ ++++|++++++||+  ..|+++|.++|+++|          ++||+|++|..|....+...   .++|++++|
T Consensus       169 ~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~---~~~d~~~~s  244 (432)
T 3a9z_A          169 LAAVRP-TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVED---LGVDFLTIV  244 (432)
T ss_dssp             HHTCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHH---HCCSEEEEE
T ss_pred             HHhccC-CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhh---cCCCEEEEe
Confidence            999987 89999999888876  789999999999999          99999999876532111100   157999999


Q ss_pred             ccccccCCCCeEEEeeCCCcchhHH-Hhhhccccc------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673          312 THKSLRGPRGGMIFFKKDPVLGVEL-ESAINNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR  384 (529)
Q Consensus       312 ~hK~l~GprgG~i~~~~~~~~~~~l-~~~i~~~~~------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~  384 (529)
                      +||++ ||+.|+++++++      + ...+....+      ....++++...++++..+++... .++++..+++.++++
T Consensus       245 ~~K~~-g~~~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~-~~~~~~~~~~~~~~~  316 (432)
T 3a9z_A          245 GHKFY-GPRIGALYVRGV------GKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVS-ENCETYEAHMRDIRD  316 (432)
T ss_dssp             GGGTT-CCSCEEEEETTB------TTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred             hhHhc-CCcceEEEEccc------cccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHH
Confidence            99987 799999999873      2 222322111      11235566777777777777553 356788889999999


Q ss_pred             HHHHHHHh-cCcEEe--cC--C-C-CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCC--CCCC----------CCC--
Q 009673          385 ALASRLVE-LGYKLV--SG--G-S-DNHLVLVDLRPMGIDGARVEKILDMASITLNKNS--VPGD----------KSA--  443 (529)
Q Consensus       385 ~l~~~L~~-~G~~v~--~~--g-t-~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~--~Pg~----------~~~--  443 (529)
                      ++.+.|++ .|+.+.  .+  + . ......+.+...+.+...+.+.|  .+|.+..+.  .++.          .+.  
T Consensus       317 ~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~  394 (432)
T 3a9z_A          317 YLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQC--QTLLASVGASCHSDHEDRPSPVLLSCGIPV  394 (432)
T ss_dssp             HHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHC--SSEECBSSCGGGGGGTTSCCHHHHHTTCCH
T ss_pred             HHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHh--cCeEEeccccccCCCCCCccHHHHhcCCCc
Confidence            99999988 466543  21  0 1 11233344433233455555444  266654331  1110          000  


Q ss_pred             -CCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          444 -LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       444 -~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                       ...+.|||++...+    +++|++++++.|+++++.
T Consensus       395 ~~~~~~iRis~~~~~----t~eei~~~~~~l~~~~~~  427 (432)
T 3a9z_A          395 DVARNAVRLSVGRST----TRAEVDLIVQDLKQAVNQ  427 (432)
T ss_dssp             HHHTTEEEEECCTTC----CHHHHHHHHHHHHHHHHH
T ss_pred             cccCceEEEEcCCCC----CHHHHHHHHHHHHHHHHH
Confidence             01378999987543    489999999999988753

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.93  E-value=2.5e-24  Score=226.30  Aligned_cols=282  Identities=17%  Similarity=0.131  Sum_probs=198.2

Q ss_pred             cCChHHH---HHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccC----CCCCCCCCCCCCchhHHHHHHHHHHHH
Q 009673           85 EADPEVC---EIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKY----SEGLPGKRYYGGNEYIDELETLCQKRA  157 (529)
Q Consensus        85 ~~d~~~~---~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y----~~G~p~~r~~~g~~~~d~lE~~a~~~l  157 (529)
                      .+++++.   +.++++..++...+++++++|.  ++|++++.+......    ++||+..|     ...+++|    +++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~n~--~~Vl~a~~~~~~~~~~~~~~~gy~Y~~-----~g~~~Le----~~l   83 (427)
T 3hvy_A           15 NINERVLELYERALNDVEKEFKYYDEIREYNQ--LKVLKAFQEERISESHFTNSSGYGYND-----IGRDSLD----RVY   83 (427)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCCCCTTCTTC-----HHHHHHH----HHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHhcccCcCCCCCc-----hhHHHHH----HHH
Confidence            4577766   5556777777788999999987  899999988644322    33444323     2356666    778


Q ss_pred             HHHcCCCCCCCceeee--cCChHHHHHHHHHhhcCCCCEEEEcC-CCCCcccc--cccccc-ccccccccceEEEEEccc
Q 009673          158 LAAFNLDENKWGVNVQ--PLSGSPANFEVYTAILKPHDRIMGLD-LPHGGHLS--HGFMTP-KRRVSGTSIYFESMPYRL  231 (529)
Q Consensus       158 a~~~g~~~~~~~~~V~--~~sGs~A~~~~l~all~pGD~Vl~~~-~~~~g~~s--~g~~~~-~~~i~~~g~~~~~v~~~v  231 (529)
                      ++++|.+.    ..|+  ++||++||..++.++++|||+|++.+ +.|+++..  ++.... ...+...|.  +++.+++
T Consensus        84 A~l~g~e~----alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~--~~~~v~~  157 (427)
T 3hvy_A           84 ANIFNTES----AFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGV--KYKMVDL  157 (427)
T ss_dssp             HHHHTCSE----EEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTC--EEEECCC
T ss_pred             HHHhCCCc----eEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCC--EEEEecC
Confidence            99999986    3444  68999999999999999999999998 77765431  000000 011223454  6666665


Q ss_pred             CCCCCCCCHHHHHHHhhh-cCCcEEEEcC----CCCCC--CCCHHHHHHHHHH--hCCEEEEecccccccccccccCCCC
Q 009673          232 DESTGLVDYDMLEKTAIL-FRPKLIIAGA----SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPF  302 (529)
Q Consensus       232 ~~~~~~iD~d~le~~i~~-~~pklIi~~~----s~~p~--~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~  302 (529)
                        +++.+|+|+|++++++ .+||+|+++.    ++||+  ..|+++|+++|++  +|+++++|++|..+...    ..|+
T Consensus       158 --~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~----~~p~  231 (427)
T 3hvy_A          158 --KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEE----KEPT  231 (427)
T ss_dssp             --BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSS----SCGG
T ss_pred             --CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccC----CCCc
Confidence              4688999999999983 3899999987    77775  5689999999999  89999999998765421    2344


Q ss_pred             C-cccEEEecccccccC---CCCeEEEeeCCCcchhHHHhhhccc-ccCCCC--CCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          303 K-YCDVVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAINNA-VFPGLQ--GGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       303 ~-~aDiv~~S~hK~l~G---prgG~i~~~~~~~~~~~l~~~i~~~-~~p~~~--g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      . ++|++++|+||+++|   ++||+|++++      ++.+++... ..++..  .++.......+...++.     ...+
T Consensus       232 ~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~------~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~-----~~~r  300 (427)
T 3hvy_A          232 DVGADIIAGSLIKNIGGGIATTGGYIAGKE------EYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLFM-----APHV  300 (427)
T ss_dssp             GGTCSEEEEETTSGGGTTTCCSCEEEEECH------HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHH-----HHHH
T ss_pred             ccCCeEEEECCcccccccccceEEEEEECH------HHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHhH-----HHHH
Confidence            4 689999999999977   8899999987      787777652 233331  12212111111112221     2467


Q ss_pred             HHHHHHHHHHHHHHHHhcCcEEecC
Q 009673          376 QNKVVSNCRALASRLVELGYKLVSG  400 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~~G~~v~~~  400 (529)
                      +++..+|+.++++.|++.|+++.++
T Consensus       301 ~~~~~~~a~~la~~L~~~g~~V~p~  325 (427)
T 3hvy_A          301 TIEAVKGAVFCARIMELAGFDVLPK  325 (427)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCEEESC
T ss_pred             HHHHHHHHHHHHHHHHhCCCeecCC
Confidence            8889999999999999999988543

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.93  E-value=7.2e-25  Score=227.30  Aligned_cols=307  Identities=11%  Similarity=0.094  Sum_probs=207.7

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +.++.+.++ .+++++++++|.+.    ..+.+.||++|+.+++. +++|||+|+++++.|.++.   +.   ......|
T Consensus        30 ~~~~~~~~~-~~~~~l~~~~~~~~----~v~~~~sgt~a~~~~~~-~~~~gd~vi~~~~~~~~~~---~~---~~~~~~g   97 (379)
T 3ke3_A           30 SKAFQEVMN-DLLSNLKTVYNAEA----AVIIPGSGTYGMEAVAR-QLTIDEDCLIIRNGWFSYR---WT---QILEKGK   97 (379)
T ss_dssp             SHHHHHHHH-HHHHHHHHHHTCSE----EEEEESCHHHHHHHHHH-HHCTTCEEEEEECSHHHHH---HH---HHHHHHC
T ss_pred             CHHHHHHHH-HHHHHHHHHhCCCC----EEEEcCChhHHHHHHHH-hCCCCCeEEEEeCCchhHH---HH---HHHHHhC
Confidence            445554444 56789999999872    33455688899998775 4579999999987553321   10   0111223


Q ss_pred             ceEEEEEcccCCC-------C-CCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEeccc
Q 009673          222 IYFESMPYRLDES-------T-GLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAH  288 (529)
Q Consensus       222 ~~~~~v~~~v~~~-------~-~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah  288 (529)
                      ..++++.++++..       . +.+|++++++.++..++++|++...++++  ..|   +++|+++|++||+++++|++|
T Consensus        98 ~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~  177 (379)
T 3ke3_A           98 FAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIA  177 (379)
T ss_dssp             CSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCceEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEecc
Confidence            2234444444310       1 26899999999965589999887655544  678   999999999999999999998


Q ss_pred             ccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccc---c---------------CC
Q 009673          289 ISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAV---F---------------PG  347 (529)
Q Consensus       289 ~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~---~---------------p~  347 (529)
                      . |...     ..+.  ++|++++|+||+|.||.| |++++++      ++.+.+....   +               .+
T Consensus       178 ~-g~~~-----~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g  245 (379)
T 3ke3_A          178 S-GCVW-----LDMKELGIDVLISAPQKGWSSTPCAGLVMLSA------AAIKKVESTESNCFSLDLKQWLTIMRAYENG  245 (379)
T ss_dssp             C-TTCC-----CCHHHHTCSEEEECTTTTTCSCCCEEEEEECH------HHHHHHHTCCCSCSTTCHHHHHHHHHHHHTT
T ss_pred             c-CCcc-----ccccccCCCEEEecchhhcCCCCceEEEEECH------HHHHhhhcCCCCceeecHHHHHHHHHhhhcc
Confidence            6 6321     1122  689999999999988887 9999987      5554443210   0               01


Q ss_pred             ---CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC-CCc-eEEEccCCCCCcHHHHH
Q 009673          348 ---LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS-DNH-LVLVDLRPMGIDGARVE  422 (529)
Q Consensus       348 ---~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt-~~~-~~~v~~~~~~i~~~~~~  422 (529)
                         +.++++...++++.++++.+...++++..++..++++++.+.|++.|++++.+.. ..+ +..+...  +. .....
T Consensus       246 ~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~--~~-~~~~~  322 (379)
T 3ke3_A          246 GHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDKGIESVAAEGFEAPGVVVSYTE--RD-DMHKG  322 (379)
T ss_dssp             SCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSBCTTCBCSSEEEEECS--CH-HHHSS
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCEecCCccccCceEEEEccC--Cc-chHHH
Confidence               2357888889999889887765557888899999999999999999998875421 122 2222221  11 11225


Q ss_pred             HhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          423 KILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       423 ~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +.|.++||.+..+..|....+...+.|||+++..++    ++|++++++.|+++++.
T Consensus       323 ~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t----~~di~~~~~~l~~~l~~  375 (379)
T 3ke3_A          323 SAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDK----LTDIDGTVERFEKALDE  375 (379)
T ss_dssp             HHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHH----HTCHHHHHHHHHHHHHH
T ss_pred             HHHHHCCeEEeCCccccccccCcCCEEEEeCCcCCC----HHHHHHHHHHHHHHHHH
Confidence            678889998865432211113346789999876554    79999999999988764

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.93  E-value=2.8e-25  Score=236.63  Aligned_cols=293  Identities=13%  Similarity=0.133  Sum_probs=207.3

Q ss_pred             HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCE---EEEcCCCCCccccccccccccccccccceE---E
Q 009673          153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDR---IMGLDLPHGGHLSHGFMTPKRRVSGTSIYF---E  225 (529)
Q Consensus       153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~---Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~---~  225 (529)
                      +++++++++|++++    +|.+++|+ +++..++.++++|||.   |++.++.|.+.... +.   ..+...|...   .
T Consensus       116 l~~~la~~~g~~~~----~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~-~~---~~~~~~G~~~~~~~  187 (465)
T 3e9k_A          116 IVGLMKDIVGANEK----EIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYA-IE---SQLQLHGLNIEESM  187 (465)
T ss_dssp             HHGGGHHHHTCCGG----GEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHH-HH---HHHHHTTCCHHHHE
T ss_pred             HHHHHHHHcCCCcC----CEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHH-HH---HHHHHcCCcceeee
Confidence            45889999999865    34445555 8899899999887765   99999988653210 00   0112233311   1


Q ss_pred             EEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCC
Q 009673          226 SMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP  301 (529)
Q Consensus       226 ~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~  301 (529)
                      +...+.+ +++.+|+++|+++++++  ++++|++++++|++  ..|+++|.++|++||+++++|++|+.|.+..+.... 
T Consensus       188 v~~~~~~-~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~-  265 (465)
T 3e9k_A          188 RMIKPRE-GEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDW-  265 (465)
T ss_dssp             EEECCCT-TCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH-
T ss_pred             EEEecCC-CCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhc-
Confidence            1222333 45789999999999732  68899999888876  789999999999999999999999887653322111 


Q ss_pred             CCcccEEEecccccc-cCCCC-eEEEeeCCCcchhHHHhhhcccc------------------------cCCCCCCChHH
Q 009673          302 FKYCDVVTTTTHKSL-RGPRG-GMIFFKKDPVLGVELESAINNAV------------------------FPGLQGGPHNH  355 (529)
Q Consensus       302 ~~~aDiv~~S~hK~l-~Gprg-G~i~~~~~~~~~~~l~~~i~~~~------------------------~p~~~g~p~~~  355 (529)
                        ++|++++|+||++ .||.+ |+++++++      +.+.+....                        .....|+|+..
T Consensus       266 --~~D~~~~s~~K~l~~gp~~~g~l~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~  337 (465)
T 3e9k_A          266 --GVDFACWCSYKYLNAGAGGIAGAFIHEK------HAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPIL  337 (465)
T ss_dssp             --TCCEEEECSSSTTCCCTTCCCEEEECGG------GTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHH
T ss_pred             --CCCEEEECcccccccCCCceEEEEEcHH------HHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHH
Confidence              5899999999999 48887 99999873      332222110                        00113578888


Q ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-----------cCcEEecCCC---CCceEEEccCCCCCcHHHH
Q 009673          356 TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-----------LGYKLVSGGS---DNHLVLVDLRPMGIDGARV  421 (529)
Q Consensus       356 ~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-----------~G~~v~~~gt---~~~~~~v~~~~~~i~~~~~  421 (529)
                      .++++.++++.+...++++..++..++++++.+.|++           .|++++.+..   ...++++.+.   .+..++
T Consensus       338 ~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~---~~~~~l  414 (465)
T 3e9k_A          338 LVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFS---VPNKDV  414 (465)
T ss_dssp             HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEEC---CTTCCH
T ss_pred             HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEec---CCHHHH
Confidence            8988888888765445688889999999999999988           6888876421   1344555554   234567


Q ss_pred             HHhHhcCCeEEcCCCCCCCCCCCCCCeEEEcc-CCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          422 EKILDMASITLNKNSVPGDKSALVPGGIRIGS-PAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       422 ~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~-~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      .+.|.+.||.+...         .++.|||+. +.++    +++|++++++.|++++..
T Consensus       415 ~~~L~~~Gi~v~~~---------~~~~iRis~~~~~~----t~edi~~~~~~l~~~l~~  460 (465)
T 3e9k_A          415 FQELEKRGVVCDKR---------NPNGIRVAPVPLYN----SFHDVYKFTNLLTSILDS  460 (465)
T ss_dssp             HHHHHTTTEECEEE---------TTTEEEEBCCTTTC----CHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHCCEEEecC---------CCCEEEEeCcccCC----CHHHHHHHHHHHHHHHHh
Confidence            78888889998521         257999997 5554    489999999999988753

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=99.93  E-value=5.6e-24  Score=218.52  Aligned_cols=315  Identities=15%  Similarity=0.131  Sum_probs=218.4

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhcc--CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC-h
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNK--YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-G  177 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~--y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s-G  177 (529)
                      +.|+|..+++.  +++.|++++...+.+.  ...+|+..       ...+++    +++++++|++++    +|.+++ |
T Consensus        27 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~-------~~~~lr----~~la~~~g~~~~----~i~~t~g~   91 (360)
T 3hdo_A           27 SWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSA-------SSQKLR----EVAGELYGFDPS----WIIMANGS   91 (360)
T ss_dssp             TSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCS-------SCHHHH----HHHHHHHTCCGG----GEEEESSH
T ss_pred             ceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCC-------chHHHH----HHHHHHhCcCcc----eEEEcCCH
Confidence            56888888874  5899999998887543  01234321       113444    677888898765    333455 4


Q ss_pred             HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 009673          178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA  257 (529)
Q Consensus       178 s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~  257 (529)
                      ++|+..++.++++|||+|++.+|.|.++..        .+...|.  +++.++++. ++.+  ++++   +..++++|++
T Consensus        92 ~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~~-~~~~--~~l~---~~~~~~~v~i  155 (360)
T 3hdo_A           92 DEVLNNLIRAFAAEGEEIGYVHPSYSYYGT--------LAEVQGA--RVRTFGLTG-DFRI--AGFP---ERYEGKVFFL  155 (360)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEESSSCTHHHH--------HHHHHTC--EEEEECBCT-TSSB--TTCC---SSBCSSEEEE
T ss_pred             HHHHHHHHHHHhCCCCEEEEcCCChHHHHH--------HHHHCCC--EEEEeeCCC-CCCH--HHHH---hhcCCCEEEE
Confidence            599999999999999999999988765421        2334454  667777753 3444  4443   3236789999


Q ss_pred             cCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCC-C--cccEEEecccccc--cCCCCeEEEeeCCC
Q 009673          258 GASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K--YCDVVTTTTHKSL--RGPRGGMIFFKKDP  330 (529)
Q Consensus       258 ~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-~--~aDiv~~S~hK~l--~GprgG~i~~~~~~  330 (529)
                      +.++||+  ..|.+++.++|+++|+++|+|++|.. +.  +....++ .  ..+++++|+||++  +|+|.|++++++  
T Consensus       156 ~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~-~~--~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--  230 (360)
T 3hdo_A          156 TTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAE-FA--ESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARP--  230 (360)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGG-GS--SCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCH--
T ss_pred             eCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHh-hC--CcchhHHhccCCCEEEEecchHhhcCCccceeeEeeCH--
Confidence            8888876  78999999999999999999999753 21  1111111 1  2348889999996  678889999976  


Q ss_pred             cchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEc
Q 009673          331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVD  410 (529)
Q Consensus       331 ~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~  410 (529)
                          ++.+.+.....+   .+++....+++..+++.  ...+++..+++.++++.+.+.|++.|+.+..+  ...++++.
T Consensus       231 ----~~~~~~~~~~~~---~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~~~~  299 (360)
T 3hdo_A          231 ----EVIAALDKIRDH---YNLDRLAQAACVAALRD--QAYLSECCRRIRETREWFTTELRSIGYDVIPS--QGNYLFAT  299 (360)
T ss_dssp             ----HHHHHHHHHSCS---CCSCHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHTTCEECCC--SSSEEEEE
T ss_pred             ----HHHHHHHHhCCC---CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEEcCC--CccEEEEE
Confidence                777777654332   23344455555556653  23357888889999999999999888887653  24556665


Q ss_pred             cCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          411 LRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       411 ~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +.  +.+..++.+.|.++||.+...    .. +..++++||++.       +++|++++++.|+++.+
T Consensus       300 ~~--~~~~~~l~~~l~~~gi~v~~~----~~-~~~~~~iRis~~-------~~~e~~~l~~al~~~~~  353 (360)
T 3hdo_A          300 PP--DRDGKRVYDGLYARKVLVRHF----SD-PLLAHGMRISIG-------TREEMEQTLAALKEIGE  353 (360)
T ss_dssp             CT--TCCHHHHHHHHHHTTEECBCC----CS-TTTTTSEEEECC-------CHHHHHHHHHHHHHHHC
T ss_pred             CC--CCCHHHHHHHHHHCCEEEEEC----CC-CCCCCEEEEEcC-------CHHHHHHHHHHHHHHhc
Confidence            54  457788888999999999643    21 223578999964       47999999999987654

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=99.93  E-value=2.4e-24  Score=225.86  Aligned_cols=349  Identities=12%  Similarity=0.143  Sum_probs=221.0

Q ss_pred             ccCChHHHHHHHHHHHHh-----hcceeEecCC------C-CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHH
Q 009673           84 GEADPEVCEIITKEKERQ-----FKSLELIASE------N-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELET  151 (529)
Q Consensus        84 ~~~d~~~~~~~~~e~~~~-----~~~i~L~ase------n-~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~  151 (529)
                      ...++.++.+..+.....     .+.|+|..++      + ++++.|.+++....... ..+|+.   ..|   ..++++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~---~~g---~~~lr~   87 (418)
T 3rq1_A           15 KKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSE-HVGYAP---IAG---IPDFLC   87 (418)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHH-HHSCCC---TTC---CHHHHH
T ss_pred             CCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhcccc-cCCCCC---CCC---hHHHHH
Confidence            344445566554433322     2568887764      2 46889999987654321 112322   112   235555


Q ss_pred             HHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcc
Q 009673          152 LCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR  230 (529)
Q Consensus       152 ~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~  230 (529)
                      ...+++....+.+..   .+|.+++|+ +|+..++.++++|||+|++++|.|.++..        .+...|.  +++.++
T Consensus        88 ~ia~~~~~~~~~~~~---~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~v~  154 (418)
T 3rq1_A           88 AAEKECFGNFRPEGH---IRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRV--------ICSDTGR--TLVTYS  154 (418)
T ss_dssp             HHHHHHHGGGCCSSE---EEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHH--------HHHHTTC--EEEEEC
T ss_pred             HHHHHHhcccCcccc---ccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHH--------HHHHcCC--EEEEEe
Confidence            555666555554421   245566766 99999999999999999999998765431        2344555  677777


Q ss_pred             cCCCCCCCCHHHHHHHhhhc---CCc-EEEEcCC-CCCC--CCCHH---HHHHHHH------HhCCEEEEeccccccccc
Q 009673          231 LDESTGLVDYDMLEKTAILF---RPK-LIIAGAS-AYPR--DFDYP---RMRQIAD------AVGALLMMDMAHISGLVA  294 (529)
Q Consensus       231 v~~~~~~iD~d~le~~i~~~---~pk-lIi~~~s-~~p~--~~d~~---~i~~ia~------~~g~~livD~ah~~Gli~  294 (529)
                      ++++++.+|+++|++.+++.   +++ +|++++| +||+  ..+.+   +|+++|+      +||++||+|++| .++..
T Consensus       155 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y-~~~~~  233 (418)
T 3rq1_A          155 LFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAY-LDYSG  233 (418)
T ss_dssp             SBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTT-GGGSS
T ss_pred             eeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccc-ccccC
Confidence            75556799999999999753   666 7888888 8886  55654   5556666      899999999996 45443


Q ss_pred             ccccCCC----CC--ccc---EEEecccccc--cCCCCeEEEe---eCCCcchhHHHhhhcccccC---CCCCCChHHHH
Q 009673          295 ASVVADP----FK--YCD---VVTTTTHKSL--RGPRGGMIFF---KKDPVLGVELESAINNAVFP---GLQGGPHNHTI  357 (529)
Q Consensus       295 ~~~~~~~----~~--~aD---iv~~S~hK~l--~GprgG~i~~---~~~~~~~~~l~~~i~~~~~p---~~~g~p~~~~i  357 (529)
                      .+....+    ..  ..|   ++++|+||++  +|+|.||+++   ++      ++.+.+......   +...+++....
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (418)
T 3rq1_A          234 EKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDE------EIADEFFEVNKSTSRATWSNICRPAM  307 (418)
T ss_dssp             CHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSH------HHHHHHHHHHHHHHHHHTSSCCHHHH
T ss_pred             ChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCH------HHHHHHHHHHHHHHhhccCCCchHHH
Confidence            3211101    11  123   7889999986  6889999998   55      666655432110   00122233333


Q ss_pred             HHHHHHHHHhc-----CchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEE
Q 009673          358 GGLAVCLKHAQ-----SPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITL  432 (529)
Q Consensus       358 aala~al~~~~-----~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v  432 (529)
                      +++..+++...     ....+++.+++.++++.+.+.|.+.|+++..+. .+++.|+++.    +..++.+.|.++||.+
T Consensus       308 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~----~~~~~~~~l~~~gi~v  382 (418)
T 3rq1_A          308 RTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVGLPMLPYR-GGFFITIPTD----SANAICEELKKEHIYV  382 (418)
T ss_dssp             HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC-SSSEEEEECT----THHHHHHHHHHTTEEC
T ss_pred             HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-ceEEEEcCCC----CHHHHHHHHHhCCEEE
Confidence            33333332110     011234567778888899999988888876542 3455666653    5677888899999998


Q ss_pred             cCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          433 NKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       433 ~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      .    ||      ++++||++..     .++++++++++.|+++++.
T Consensus       383 ~----~g------~~~iRis~~~-----~~~~~i~~~~~~l~~~l~~  414 (418)
T 3rq1_A          383 I----AL------ANGIRIAACG-----IPKCQMTGLAEKIYNAMKS  414 (418)
T ss_dssp             E----EC------SSEEEEEGGG-----SCHHHHTTHHHHHHHHHHH
T ss_pred             e----cC------CCCeEEEEec-----CCHHHHHHHHHHHHHHHHH
Confidence            4    43      4689999532     4689999999999988764

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.93  E-value=6.4e-25  Score=227.85  Aligned_cols=322  Identities=10%  Similarity=0.036  Sum_probs=209.4

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHH-HHHcCCCCCCCceeeecCChHHHHHHHHHhh-cC
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA-LAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LK  190 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~l-a~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~  190 (529)
                      .+++.+++++...+.+.+        |+...+..+++|    +.+ ++++|...    -.|.++||++|+..++.++ ++
T Consensus        13 ~~~~~i~~a~~~~~~~~~--------~~~~~~~~~~l~----~~~~a~~~g~~~----~~v~~~sgt~al~~al~~l~~~   76 (377)
T 3ju7_A           13 VPVIEYLDELKEIDASHI--------YTNYGPINQRFE----QTIMSGFFQNRG----AVTTVANATLGLMAAIQLKKRK   76 (377)
T ss_dssp             CCGGGGHHHHHHHHHHTC--------CSSSCHHHHHHH----HHHHHHTSTTCS----EEEEESCHHHHHHHHHHHHSCT
T ss_pred             CCcHHHHHHHHHHHHcCC--------cccCCHHHHHHH----HHHHHHHhCCCC----eEEEeCCHHHHHHHHHHHcCCC
Confidence            457888899888876543        111124456666    667 88999322    1466789999999999998 99


Q ss_pred             CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHh-hhcC--CcEEEEcCCCCCCCCC
Q 009673          191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTA-ILFR--PKLIIAGASAYPRDFD  267 (529)
Q Consensus       191 pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i-~~~~--pklIi~~~s~~p~~~d  267 (529)
                      |||+|+++++.|.+...        .+...|.  +++.++++++++.+|++++++++ ++ +  +|+|+.+++ ++...|
T Consensus        77 ~Gd~Vi~~~~~~~~~~~--------~~~~~G~--~~~~v~~~~~~~~~d~~~l~~~i~~~-~~~tk~v~~~~~-~G~~~~  144 (377)
T 3ju7_A           77 KGKYALMPSFTFPATPL--------AAIWCGL--EPYFIDISIDDWYMDKTVLWDKIEEL-KEEVAIVVPYAT-FGSWMN  144 (377)
T ss_dssp             TCCEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTCSBCHHHHHHHHHHH-GGGEEEECCBCG-GGBCCC
T ss_pred             CcCEEEECCCCcHHHHH--------HHHHcCC--EEEEEecCCccCCcCHHHHHHHHhcC-CCCceEEEEECC-CCCccC
Confidence            99999999998765431        2344564  77788887678899999999988 44 6  888875432 345789


Q ss_pred             HHHHHHHHHHhCCEEEEecccccccccccccC-CCCCcccEEEec--ccccccCCCCeEEEeeCCCcchhHHHhhhcccc
Q 009673          268 YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DPFKYCDVVTTT--THKSLRGPRGGMIFFKKDPVLGVELESAINNAV  344 (529)
Q Consensus       268 ~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~-~~~~~aDiv~~S--~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~  344 (529)
                      +++|.++|+ +|++||+|++|..|....+... ..  .+|+.++|  .||+++++.||+++++++     ++.++++...
T Consensus       145 ~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~--~~d~~~~S~~~~K~l~~g~gG~~~~~~~-----~l~~~~~~~~  216 (377)
T 3ju7_A          145 LEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYGQD--FSGMIIYSFHATKPFGIGEGGLIYSKNE-----EDIQRIKRMG  216 (377)
T ss_dssp             CHHHHHHHH-TTCCBEEECTTCTTCEETTEETTTT--CSSEEEEECBTTSSSCCBSCEEEEESCH-----HHHHHHHHHT
T ss_pred             HHHHHHHHh-cCCEEEEECCCccCCeECCEeccCC--CCcEEEEECCCCCcCCCCCcEEEEECCH-----HHHHHHHHHH
Confidence            999999999 9999999999988865433221 11  24555554  679998788899998874     5666554332


Q ss_pred             cCCC--------CC-CChH-HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC---cEEecCCC--CCce-EE
Q 009673          345 FPGL--------QG-GPHN-HTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG---YKLVSGGS--DNHL-VL  408 (529)
Q Consensus       345 ~p~~--------~g-~p~~-~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G---~~v~~~gt--~~~~-~~  408 (529)
                      ..+.        .| +... ...+++  ++..+  ..++.+.++..++++.+.+.|.+.+   +.+.....  ..+. +.
T Consensus       217 ~~g~~~~~~~~~~g~~~~~~~~~aa~--~~~~l--~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~  292 (377)
T 3ju7_A          217 NFGFDTNRECTMMGFNCKMSEYAAAI--GIATM--KKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMP  292 (377)
T ss_dssp             BTTBCTTSCBCSSCCBCCCCHHHHHH--HHHHH--HTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEE
T ss_pred             hcCCCCCCceeeccccCCCCHHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEE
Confidence            2211        01 0111 112222  22222  3456778888899999999998854   22222211  2222 23


Q ss_pred             EccCCCCCcHHHHHHhHhcCCeEEcCCC-CCCCCC-CC--------------CCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673          409 VDLRPMGIDGARVEKILDMASITLNKNS-VPGDKS-AL--------------VPGGIRIGSPAMTTRGFSEKEFVAIADF  472 (529)
Q Consensus       409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~-~Pg~~~-~~--------------~~~~iRig~~~~tt~g~~~~d~~~la~~  472 (529)
                      +.+. .+.+.+.+.+.|.++||.++..+ .|.+.. .+              ....||+.+..    .++++|++++++.
T Consensus       293 ~~~~-~~~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~----~~t~~di~~v~~~  367 (377)
T 3ju7_A          293 ILCP-EEVRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWE----GMTKEIVEQIVIC  367 (377)
T ss_dssp             EECC-TTSCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCT----TCCHHHHHHHHHH
T ss_pred             EEeC-ChhhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCC----CCCHHHHHHHHHH
Confidence            3332 23357889999999999998765 232221 11              02358887643    4679999999999


Q ss_pred             HHHHHHH
Q 009673          473 IHEGVEI  479 (529)
Q Consensus       473 i~~~~~~  479 (529)
                      |.+++..
T Consensus       368 l~~~~~~  374 (377)
T 3ju7_A          368 LGQKVVS  374 (377)
T ss_dssp             HTC----
T ss_pred             HHHHHhc
Confidence            9887764

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.93  E-value=4.1e-24  Score=223.45  Aligned_cols=325  Identities=14%  Similarity=0.116  Sum_probs=219.5

Q ss_pred             ceeEecCC-CCCcHHHHHHHhhhhhccCCCCCCCC--CCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHH
Q 009673          104 SLELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGK--RYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP  179 (529)
Q Consensus       104 ~i~L~ase-n~~~~~V~eal~~~l~~~y~~G~p~~--r~~~g-~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~  179 (529)
                      .+.|..+. .+.|+.|++++...+.+.|.  ++..  ++..+ .+...    .+++++++++|++++++   +..++|++
T Consensus        29 ~~yld~~~~~~~~~~v~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~~----~l~~~la~~~g~~~~~v---~~~~g~t~   99 (416)
T 1qz9_A           29 VIYLDGNSLGARPVAALARAQAVIAEEWG--NGLIRSWNSAGWRDLSE----RLGNRLATLIGARDGEV---VVTDTTSI   99 (416)
T ss_dssp             CEECCTTTSCCCBTTHHHHHHHHHHTCCC--CCGGGHHHHTSGGGHHH----HHHHHHHTTTTCCTTSE---EECSCHHH
T ss_pred             eEeecCCCcCCCcHHHHHHHHHHHHHHHh--ccCccccchhhHHHHHH----HHHHHHHHHcCCCcccE---EEeCChhH
Confidence            45565444 36788999999888765442  2211  11111 12223    34588999999976431   22344558


Q ss_pred             HHHHHHHhhc------CCCCEEEEc-CCCCCccccccccccccccccc--cceEEEEEcccCCCCCCCCHHHHHHHhhhc
Q 009673          180 ANFEVYTAIL------KPHDRIMGL-DLPHGGHLSHGFMTPKRRVSGT--SIYFESMPYRLDESTGLVDYDMLEKTAILF  250 (529)
Q Consensus       180 A~~~~l~all------~pGD~Vl~~-~~~~~g~~s~g~~~~~~~i~~~--g~~~~~v~~~v~~~~~~iD~d~le~~i~~~  250 (529)
                      ++..++.+++      +|||+|++. .+.|+++......    .....  |.  +++.+++        +++|++.+++ 
T Consensus       100 al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~----~~~~~~~g~--~~~~v~~--------~~~l~~~i~~-  164 (416)
T 1qz9_A          100 NLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEG----LADMLQQGY--TLRLVDS--------PEELPQAIDQ-  164 (416)
T ss_dssp             HHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHH----HHHHHCSSC--EEEEESS--------GGGHHHHCST-
T ss_pred             HHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHH----HHHHhcCCc--eEEEeCc--------HHHHHHHhCC-
Confidence            8877888776      899975554 4455543211000    00111  43  5555543        6788888877 


Q ss_pred             CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccc-cCCCC-eEE
Q 009673          251 RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL-RGPRG-GMI  324 (529)
Q Consensus       251 ~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l-~Gprg-G~i  324 (529)
                      ++++|++++++||+  ..|+++|.++|+++|+++|+|++|..|....     .+.  ++|++++|+||++ +|+++ |++
T Consensus       165 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~-----~~~~~~~d~~~~s~~K~l~~g~~~~g~l  239 (416)
T 1qz9_A          165 DTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPV-----DLHQAGADYAIGCTYKYLNGGPGSQAFV  239 (416)
T ss_dssp             TEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCC-----CHHHHTCSEEEECSSSTTCCCTTCCCEE
T ss_pred             CceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCC-----ChhhcCCCEEEecCcccCCCCCCCeEEE
Confidence            89999999888775  7899999999999999999999987664321     121  4799999999997 57888 999


Q ss_pred             EeeCCCcchhHHHhhhccccc----------------------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 009673          325 FFKKDPVLGVELESAINNAVF----------------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN  382 (529)
Q Consensus       325 ~~~~~~~~~~~l~~~i~~~~~----------------------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~  382 (529)
                      ++++      ++.+.+.....                      ....++++...++++..+++.....++++..+++.++
T Consensus       240 ~~~~------~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~  313 (416)
T 1qz9_A          240 WVSP------QLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLAL  313 (416)
T ss_dssp             EECT------TTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred             EECH------HHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence            9988      34443332110                      0123567777888877788877655678889999999


Q ss_pred             HHHHHHHHHhc----CcEEecCCC---CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCC
Q 009673          383 CRALASRLVEL----GYKLVSGGS---DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPA  455 (529)
Q Consensus       383 a~~l~~~L~~~----G~~v~~~gt---~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~  455 (529)
                      ++++.+.|.+.    |+.+..+..   ..+++++.+.    +..++.+.|.++||.+...         .++.+||+++.
T Consensus       314 ~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~l~~~gi~~~~~---------~~~~lRis~~~  380 (416)
T 1qz9_A          314 TDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHP----EGYAVIQALIDRGVIGDYR---------EPRIMRFGFTP  380 (416)
T ss_dssp             HHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECT----THHHHHHHHHTTTEECEEE---------TTTEEEEECCT
T ss_pred             HHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecC----CHHHHHHHHHhCCcEeccC---------CCCeEEEeCcc
Confidence            99999999885    898876421   2355666654    2567888888889987421         25789999763


Q ss_pred             CccCCCCHHHHHHHHHHHHHHHHH
Q 009673          456 MTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       456 ~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +.   .+++|++++++.|+++++.
T Consensus       381 ~~---~t~~~i~~~~~~l~~~~~~  401 (416)
T 1qz9_A          381 LY---TTFTEVWDAVQILGEILDR  401 (416)
T ss_dssp             TT---CCHHHHHHHHHHHHHHHHH
T ss_pred             cC---CCHHHHHHHHHHHHHHHhc
Confidence            11   3589999999999988753

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=99.93  E-value=4.9e-24  Score=226.17  Aligned_cols=340  Identities=12%  Similarity=0.027  Sum_probs=221.7

Q ss_pred             hcceeEecCCC----CCcHHHHHHHhhhhhccC--CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeec
Q 009673          102 FKSLELIASEN----FTSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQP  174 (529)
Q Consensus       102 ~~~i~L~asen----~~~~~V~eal~~~l~~~y--~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~  174 (529)
                      .+.|+|..+..    ++++.+.+++...+.+..  ..+|+.      .....++++...+++.+.+|++ ++    +|.+
T Consensus        76 ~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~------~~g~~~lr~~ia~~~~~~~g~~~~~----~v~~  145 (448)
T 3aow_A           76 SDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGT------TKGFTPLRETLMKWLGKRYGISQDN----DIMI  145 (448)
T ss_dssp             SSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCC------TTCCHHHHHHHHHHHHHHHCCCTTS----EEEE
T ss_pred             CCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCC------CCCcHHHHHHHHHHHHHhcCcCChh----hEEE
Confidence            45688865542    256788988887765321  112322      1113456655556666677984 32    4555


Q ss_pred             CChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhh----h
Q 009673          175 LSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAI----L  249 (529)
Q Consensus       175 ~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~----~  249 (529)
                      ++|+ +|+..++.++++|||+|++.+|.|.++..        .+...|.  +++.+++++ + .+|+++|++.++    +
T Consensus       146 t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~-~-g~d~~~L~~~l~~~~~~  213 (448)
T 3aow_A          146 TSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQ--------AFNFYEP--QYIQIPLDD-E-GMKVEILEEKLKELKSQ  213 (448)
T ss_dssp             ESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTCC--EEEEEEEET-T-EECHHHHHHHHHHHHHT
T ss_pred             eCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHH--------HHHHcCC--EEEEeccCC-C-CCCHHHHHHHHhhhhcc
Confidence            6665 99999999999999999999998755421        2334454  666666664 3 399999999987    3


Q ss_pred             -cCCcEEE-EcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---C--cccEEEecccccc-
Q 009673          250 -FRPKLII-AGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTHKSL-  316 (529)
Q Consensus       250 -~~pklIi-~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~--~aDiv~~S~hK~l-  316 (529)
                       .++++|+ +..++||+  ..+   +++|.++|++||++||+|++|..+ ...+....++   +  +.++++.|++|++ 
T Consensus       214 ~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~-~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~  292 (448)
T 3aow_A          214 GKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGEL-RYSGNPEKKIKALDNEGRVIYLGTFSKILA  292 (448)
T ss_dssp             TCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTC-BCSSCCCCCTGGGCTTSCEEEEEESTTTTC
T ss_pred             CCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccc-cCCCCCCcCHHhcCCCCCEEEEccchhhcc
Confidence             2788875 56778876  444   678999999999999999996543 3322211122   1  3468899999998 


Q ss_pred             cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHHHhc--
Q 009673          317 RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-SPEFKVYQNKVVSNCRALASRLVEL--  393 (529)
Q Consensus       317 ~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-~~~~~~~~~~i~~~a~~l~~~L~~~--  393 (529)
                      +|+|.||+++++      ++.+++.........+++.. ..+++..+|+... ....++..+++.++++.+.+.|++.  
T Consensus       293 ~GlriG~v~~~~------~l~~~l~~~~~~~~~~~~~~-~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  365 (448)
T 3aow_A          293 PGFRIGWMVGDP------GIIRKMEIAKQSTDLCTNVF-GQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMP  365 (448)
T ss_dssp             GGGCCEEEEECH------HHHHHHHHHHHHHHSSCCHH-HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             ccccEEEEEeCH------HHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            467889999987      67766654322222233333 3333344554310 1223556677778899999999874  


Q ss_pred             -CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673          394 -GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF  472 (529)
Q Consensus       394 -G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~  472 (529)
                       |+.+..+. ...++|+++. .+++..++.+.|.+.||.+..+...+. ....++++||++...     +++++++.++.
T Consensus       366 ~g~~~~~p~-~g~~~~v~~~-~~~~~~~l~~~l~~~gV~v~pg~~f~~-~~~~~~~iRls~~~~-----~~e~i~~~~~~  437 (448)
T 3aow_A          366 EGVKWTKPE-GGMFIWVTLP-DGIDSKKMLERAIKKGVAYVPGEAFYA-HRDVKNTMRLNFTYV-----DEDKIMEGIKR  437 (448)
T ss_dssp             TTCEECCCS-BSSEEEEECS-TTCCHHHHHHHHHHTTEECEEGGGGST-TCCCCSEEEEECSSS-----CTHHHHHHHHH
T ss_pred             CCeEEeCCC-ccEEEEEEcC-CCCCHHHHHHHHHHCCcEEEcchhhcC-CCCCCCEEEEEeCCC-----CHHHHHHHHHH
Confidence             78876542 3456788875 355677777777777999854321111 112357899997542     47999999999


Q ss_pred             HHHHHHH
Q 009673          473 IHEGVEI  479 (529)
Q Consensus       473 i~~~~~~  479 (529)
                      |.++++.
T Consensus       438 L~~~l~~  444 (448)
T 3aow_A          438 LAETIKE  444 (448)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9988764

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=99.93  E-value=1.1e-23  Score=219.67  Aligned_cols=342  Identities=16%  Similarity=0.045  Sum_probs=220.0

Q ss_pred             cceeEecCCC----CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673          103 KSLELIASEN----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS  178 (529)
Q Consensus       103 ~~i~L~asen----~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs  178 (529)
                      +.|+|..+..    +.++.+.+++...+.+....    .. |+......++++...+++.+.+|.+.+.  .+|.+++|+
T Consensus        35 ~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~----~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~--~~v~~t~g~  107 (407)
T 2zc0_A           35 KLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKS----VM-YTPANGIPELREELAAFLKKYDHLEVSP--ENIVITIGG  107 (407)
T ss_dssp             CCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGG----GS-CCCTTCCHHHHHHHHHHHHHHSCCCCCG--GGEEEESHH
T ss_pred             ceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccc----cc-CCCCCCCHHHHHHHHHHHHHhcCCCCCc--ceEEEecCH
Confidence            5678865432    25688999988777532100    00 2111223567766667777777853221  245567774


Q ss_pred             -HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhh----h-cCC
Q 009673          179 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAI----L-FRP  252 (529)
Q Consensus       179 -~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~----~-~~p  252 (529)
                       +|+..++.++++|||+|++.+|.|.++.        ..+...|.  +++.+++++ ++ +|+++|++.++    + .++
T Consensus       108 t~a~~~~~~~~~~~gd~vl~~~p~~~~~~--------~~~~~~g~--~~~~v~~~~-~~-~d~~~l~~~l~~~~~~~~~~  175 (407)
T 2zc0_A          108 TGALDLLGRVLIDPGDVVITENPSYINTL--------LAFEQLGA--KIEGVPVDN-DG-MRVDLLEEKIKELKAKGQKV  175 (407)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEEESCCHHHH--------HHHHTTTC--EEEEEEEET-TE-ECHHHHHHHHHHHHHTTCCE
T ss_pred             HHHHHHHHHHhcCCCCEEEEeCCChHHHH--------HHHHHcCC--EEEEcccCC-CC-CCHHHHHHHHHhhhcccCCc
Confidence             9999999999999999999998775432        12334554  566666654 33 99999999987    4 267


Q ss_pred             cEEE-EcCCCCCC--CCCHH---HHHHHHHHhCCEEEEecccccccccccccCCCC---C--cccEEEeccccccc-CCC
Q 009673          253 KLII-AGASAYPR--DFDYP---RMRQIADAVGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTHKSLR-GPR  320 (529)
Q Consensus       253 klIi-~~~s~~p~--~~d~~---~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~--~aDiv~~S~hK~l~-Gpr  320 (529)
                      ++|+ ++.++||+  ..+.+   +|.++|++||+++|+|++|..+ ...+....++   .  +.+++++|+||+++ |.|
T Consensus       176 ~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r  254 (407)
T 2zc0_A          176 KLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFM-RYEGGDIVPLKALDNEGRVIVAGTLSKVLGTGFR  254 (407)
T ss_dssp             EEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTS-BSSCSSCCCGGGGCSSCCEEEEEESTTTTCTTSC
T ss_pred             eEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCccc-ccCCCCCCChhhcCCCCCEEEEcccccccCCCcc
Confidence            8874 55677775  56665   8999999999999999997644 3222111111   1  23478899999984 568


Q ss_pred             CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-C-chHHHHHHHHHHHHHHHHHHHHhc--CcE
Q 009673          321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-S-PEFKVYQNKVVSNCRALASRLVEL--GYK  396 (529)
Q Consensus       321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-~-~~~~~~~~~i~~~a~~l~~~L~~~--G~~  396 (529)
                      +|++++++      ++.+.+.....+...+++... .+++..+++... . ..+++..+++.++++.+.+.|++.  |+.
T Consensus       255 ~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~  327 (407)
T 2zc0_A          255 IGWIIAEG------EILKKVLMQKQPIDFCAPAIS-QYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAE  327 (407)
T ss_dssp             CEEEECCH------HHHHHHHHHHTTTTSSSCHHH-HHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred             eEEEecCH------HHHHHHHHHHHhhcCCCCHHH-HHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCE
Confidence            89999986      677766554333333333333 333333454320 1 223556777888899999999873  676


Q ss_pred             EecCCCCCceEEEccCCCCCcHHHHHHhHhcC-CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          397 LVSGGSDNHLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       397 v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~-GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      +..+. ..+++++++.. +++..++.+.|.+. ||.+..+...+. ....++++||++...     +++|++++++.|.+
T Consensus       328 ~~~~~-~~~~~~~~~~~-~~~~~~l~~~l~~~~gi~v~~g~~~~~-~~~~~~~iRis~~~~-----~~~~i~~~~~~l~~  399 (407)
T 2zc0_A          328 FTKPI-AGMFVMFFLPE-GADGISFANELMEREGVVVVPGKPFYT-DESGKNAIRLNFSRP-----SKEEIPIGIKKLAK  399 (407)
T ss_dssp             BCCCS-BSSEEEEECST-TCCHHHHHHHHHHHTCEECBCSGGGCS-SSCCTTEEEEECSSS-----CTTHHHHHHHHHHH
T ss_pred             EecCC-CcEEEEEEcCC-CCCHHHHHHHHHHhCCeEEECchhccC-CCCCCCeEEEEeCCC-----CHHHHHHHHHHHHH
Confidence            65432 34567777743 56777777777666 999965421111 011357899997643     46999999999998


Q ss_pred             HHHH
Q 009673          476 GVEI  479 (529)
Q Consensus       476 ~~~~  479 (529)
                      +++.
T Consensus       400 ~l~~  403 (407)
T 2zc0_A          400 LYKE  403 (407)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8753

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.93  E-value=9.7e-25  Score=224.70  Aligned_cols=323  Identities=14%  Similarity=0.079  Sum_probs=211.8

Q ss_pred             CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-
Q 009673          110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-  188 (529)
Q Consensus       110 sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-  188 (529)
                      +..++++.|++++...+.+.+  .+|       .+...+++    +.+++++|.+.     .+..++|++|+..++.++ 
T Consensus         7 ~~~~~~~~v~~a~~~~~~~~~--~~~-------~~~~~~l~----~~la~~~~~~~-----v~~~~ggt~al~~~~~~~~   68 (375)
T 2fnu_A            7 SEPCLDKEDKKAVLEVLNSKQ--LTQ-------GKRSLLFE----EALCEFLGVKH-----ALVFNSATSALLTLYRNFS   68 (375)
T ss_dssp             CCCCCCHHHHHHHHHHHTSSC--CSS-------SHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHSS
T ss_pred             CCCCCCHHHHHHHHHHHHcCc--ccC-------ChHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHhc
Confidence            567789999999998875432  112       12334444    77888999872     244567779999999999 


Q ss_pred             --cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCC
Q 009673          189 --LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDF  266 (529)
Q Consensus       189 --l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~  266 (529)
                        ++|||+|+++++.|.+...        .+...|.  +++.++++++ +.+|+++|++.+++ ++++|+++.+ .+...
T Consensus        69 ~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~-~~~d~~~l~~~i~~-~~~~v~~~~~-tG~~~  135 (375)
T 2fnu_A           69 EFSADRNEIITTPISFVATAN--------MLLESGY--TPVFAGIKND-GNIDELALEKLINE-RTKAIVSVDY-AGKSV  135 (375)
T ss_dssp             CCCTTSCEEEECSSSCTHHHH--------HHHHTTC--EEEECCBCTT-SSBCGGGSGGGCCT-TEEEEEEECG-GGCCC
T ss_pred             ccCCCCCEEEECCCccHhHHH--------HHHHCCC--EEEEeccCCC-CCCCHHHHHhhcCc-CceEEEEeCC-cCCcc
Confidence              8999999999988765432        2333454  7778888744 48999999999877 7898877766 55578


Q ss_pred             CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEec--ccccccCCCCeEEEee-CCCcchhHHHhhhcc
Q 009673          267 DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTT--THKSLRGPRGGMIFFK-KDPVLGVELESAINN  342 (529)
Q Consensus       267 d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S--~hK~l~GprgG~i~~~-~~~~~~~~l~~~i~~  342 (529)
                      |+++|.++|+++|+++|+|++|..|....+.   .+. ..|+++.|  .||++ |+..|++++. ++     ++.+++..
T Consensus       136 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~---~~~~~~~i~~~s~s~~K~~-~~g~g~~~~~~~~-----~~~~~~~~  206 (375)
T 2fnu_A          136 EVESVQKLCKKHSLSFLSDSSHALGSEYQNK---KVGGFALASVFSFHAIKPI-TTAEGGAVVTNDS-----ELHEKMKL  206 (375)
T ss_dssp             CHHHHHHHHHHHTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSS-CCSSCEEEEESCH-----HHHHHHHH
T ss_pred             CHHHHHHHHHHcCCEEEEECccccCCeECCe---eccccCCeEEEeCCCCCCc-cccCceEEEeCCH-----HHHHHHHH
Confidence            9999999999999999999999877543221   121 23555555  55998 5523777664 32     45554433


Q ss_pred             cccCCC------------CCCC-hHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecC--C--CCC
Q 009673          343 AVFPGL------------QGGP-HNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG--G--SDN  404 (529)
Q Consensus       343 ~~~p~~------------~g~p-~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~--g--t~~  404 (529)
                      ....+.            .+.+ ....+.+ +.++...  ..+++..++..++++++.+.|++. |+.+..+  +  ...
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-a~~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~  283 (375)
T 2fnu_A          207 FRSHGMLKKDFFEGEVKSIGHNFRLNEIQS-ALGLSQL--KKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSN  283 (375)
T ss_dssp             HTBTTEEESSSSCEEESSCCCBCCCCHHHH-HHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCC
T ss_pred             HHhcCCccccccccccccccccCCCCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcce
Confidence            211110            1110 1112221 1122221  356778888999999999999884 8877653  1  122


Q ss_pred             ceEEEccCCCCC-cHHHHHHhHhcCCeEEcCCCCCCCC-CCC--------C-------CCeEEEccCCCccCCCCHHHHH
Q 009673          405 HLVLVDLRPMGI-DGARVEKILDMASITLNKNSVPGDK-SAL--------V-------PGGIRIGSPAMTTRGFSEKEFV  467 (529)
Q Consensus       405 ~~~~v~~~~~~i-~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~--------~-------~~~iRig~~~~tt~g~~~~d~~  467 (529)
                      +++++.+...++ +..++.+.|.+.||.+.....|++. ..+        .       .+.|||+++..    .+++|++
T Consensus       284 ~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~----~t~~~i~  359 (375)
T 2fnu_A          284 HLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHAN----LNLESVQ  359 (375)
T ss_dssp             SCEEEEECGGGGGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTT----CCHHHHH
T ss_pred             EEEEEEeCccccchHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCC----CCHHHHH
Confidence            444566643333 5677888888999999743323321 000        1       25799997654    4589999


Q ss_pred             HHHHHHHHHHHH
Q 009673          468 AIADFIHEGVEI  479 (529)
Q Consensus       468 ~la~~i~~~~~~  479 (529)
                      ++++.|+++++.
T Consensus       360 ~~~~~l~~~~~~  371 (375)
T 2fnu_A          360 NIAHSVLKTFES  371 (375)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999988753

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=99.93  E-value=1.1e-24  Score=222.11  Aligned_cols=324  Identities=18%  Similarity=0.184  Sum_probs=207.2

Q ss_pred             ceeEecCCC-CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673          104 SLELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF  182 (529)
Q Consensus       104 ~i~L~asen-~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~  182 (529)
                      .|+|..+++ ++++.+++++...+...        ..|+..+...+++    +++++++|.+.     .+.+++|++|+.
T Consensus         5 ~i~~~~~~~~~p~~~~~~a~~~~~~~~--------~~y~~~~~~~~l~----~~la~~~g~~~-----~~~~~~gt~a~~   67 (347)
T 1jg8_A            5 MIDLRSDTVTKPTEEMRKAMAQAEVGD--------DVYGEDPTINELE----RLAAETFGKEA-----ALFVPSGTMGNQ   67 (347)
T ss_dssp             CEECSCGGGCCCCHHHHHHHHTCCCCC--------GGGTCCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHH
T ss_pred             EEEeccccCCCCCHHHHHHHhcCCCCC--------cccCCChHHHHHH----HHHHHHhCCce-----EEEecCcHHHHH
Confidence            467776665 46789999986543211        1132334445555    67888999863     356688999999


Q ss_pred             HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCcEEEE
Q 009673          183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIA  257 (529)
Q Consensus       183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-----~pklIi~  257 (529)
                      .++.++++|||+|++++|.|.+.+..+     ..+...|.  +++.+ .+ +++.+|+++|++++++.     ++++|++
T Consensus        68 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~-----~~~~~~g~--~~~~v-~~-~~~~~d~~~l~~~i~~~~~~~~~~~~v~~  138 (347)
T 1jg8_A           68 VSIMAHTQRGDEVILEADSHIFWYEVG-----AMAVLSGV--MPHPV-PG-KNGAMDPDDVRKAIRPRNIHFPRTSLIAI  138 (347)
T ss_dssp             HHHHHHCCTTCEEEEETTCHHHHSSTT-----HHHHHTCC--EEEEE-CE-ETTEECHHHHHHHSCCSCTTSCCEEEEEE
T ss_pred             HHHHHhcCCCCEEEEcCcchhhhcccc-----chhhccCe--EEEEe-cC-CCCccCHHHHHHHhccccccccCceEEEE
Confidence            999999999999999998765432111     01223454  55555 33 45778999999999752     5889999


Q ss_pred             cCCCCCC---CCC---HHHHHHHHHHhCCEEEEecccccccc-cccccCCCC-CcccEEEecccccccCCCCeEEEeeCC
Q 009673          258 GASAYPR---DFD---YPRMRQIADAVGALLMMDMAHISGLV-AASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKD  329 (529)
Q Consensus       258 ~~s~~p~---~~d---~~~i~~ia~~~g~~livD~ah~~Gli-~~~~~~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~  329 (529)
                      ++++||+   ..+   +++|.++|+++|++|++|++|..+.. ..+....++ .++|.+++|+||++++|.||+++.++ 
T Consensus       139 ~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~-  217 (347)
T 1jg8_A          139 ENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDR-  217 (347)
T ss_dssp             ESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECH-
T ss_pred             eccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCCceEEEEcCH-
Confidence            8888764   343   67889999999999999998754321 112111111 15788888999999877666676665 


Q ss_pred             CcchhHHHhhhcccc--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673          330 PVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV  407 (529)
Q Consensus       330 ~~~~~~l~~~i~~~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~  407 (529)
                           ++.+++....  +.+..........++ ..+++... ..    .++..++++.+.+.|++.|+.+.......+++
T Consensus       218 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~-~~----~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~  286 (347)
T 1jg8_A          218 -----DFIERARKARKMLGGGMRQAGVLAAAG-IIALTKMV-DR----LKEDHENARFLALKLKEIGYSVNPEDVKTNMV  286 (347)
T ss_dssp             -----HHHHHHHHHHHHHTCCCSSTHHHHHHH-HHHHHHSS-TT----HHHHHHHHHHHHHHHHHHTCBCCGGGCCSSEE
T ss_pred             -----HHHHHHHHHHHHcCCchhHHHHHHHHH-HHHHHHHH-HH----HHHHHHHHHHHHHHHHhcCceeccCCCcceEE
Confidence                 5655443211  111111111122222 23455432 12    23344677888899987777653211234567


Q ss_pred             EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ++++...+.+..++.+.|.+.||.+..    +     ..+.+||+++..    .+++|++++++.|+++++
T Consensus       287 ~~~~~~~~~~~~~~~~~l~~~gi~v~~----~-----~~~~iRl~~~~~----~~~e~i~~~~~~l~~~l~  344 (347)
T 1jg8_A          287 ILRTDNLKVNAHGFIEALRNSGVLANA----V-----SDTEIRLVTHKD----VSRNDIEEALNIFEKLFR  344 (347)
T ss_dssp             EEECTTSSSCHHHHHHHHHHHTEECEE----E-----ETTEEEEECCTT----SCHHHHHHHHHHHHHHHH
T ss_pred             EEEcccccCCHHHHHHHHHHCCCEEec----C-----CCCeEEEEeCCC----CCHHHHHHHHHHHHHHHH
Confidence            777753345677888888889999853    2     246899987532    468999999999988764

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.93  E-value=2.6e-24  Score=223.28  Aligned_cols=330  Identities=14%  Similarity=0.126  Sum_probs=219.0

Q ss_pred             ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673          104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE  183 (529)
Q Consensus       104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~  183 (529)
                      .|++..  ...|+.+++++...+.+.+        ++ ..+...+++    +.+++++|.+.     .+.+++|++|+..
T Consensus        10 ~i~~~~--p~~~~~~~~a~~~~~~~~~--------~~-~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~al~~   69 (393)
T 1mdo_A           10 FLPFSR--PAMGAEELAAVKTVLDSGW--------IT-TGPKNQELE----AAFCRLTGNQY-----AVAVSSATAGMHI   69 (393)
T ss_dssp             CBCSCC--CCCCHHHHHHHHHHHHHTC--------CS-SSHHHHHHH----HHHHHHHCCSE-----EEEESCHHHHHHH
T ss_pred             ccccCC--CCCCHHHHHHHHHHHhcCC--------cC-CChHHHHHH----HHHHHHhCCCc-----EEEecChHHHHHH
Confidence            455543  4467889999988876432        11 123344554    67888898862     2556778899999


Q ss_pred             HHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673          184 VYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY  262 (529)
Q Consensus       184 ~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~  262 (529)
                      ++.++ ++|||+|+++++.|.+...        .+...|.  +++.++++++++.+|+++|++.+++ ++++|+++++ .
T Consensus        70 ~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~-~  137 (393)
T 1mdo_A           70 ALMALGIGEGDEVITPSMTWVSTLN--------MIVLLGA--NPVMVDVDRDTLMVTPEHIEAAITP-QTKAIIPVHY-A  137 (393)
T ss_dssp             HHHHTTCCTTCEEEEESSSCHHHHH--------HHHHTTC--EEEEECBCTTTCCBCHHHHHHHCCT-TEEEECCBCG-G
T ss_pred             HHHHcCCCCCCEEEeCCCccHhHHH--------HHHHCCC--EEEEEeccCCcCCCCHHHHHHhcCC-CceEEEEeCC-C
Confidence            99999 9999999999998765431        2334554  6777777765678999999999987 7898887642 3


Q ss_pred             CCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccc--ccccCCCCeEEEeeCCCcchhHHHhhh
Q 009673          263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAI  340 (529)
Q Consensus       263 p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i  340 (529)
                      +...|+++|.++|+++|+++|+|++|..|....+. +...  .|++++|+|  |+++|+++|+++++++     ++.+++
T Consensus       138 G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~-~~~~--~d~~~~S~~k~K~l~~~~~g~~~~~~~-----~~~~~l  209 (393)
T 1mdo_A          138 GAPADLDAIYALGERYGIPVIEDAAHATGTSYKGR-HIGA--RGTAIFSFHAIKNITCAEGGIVVTDNP-----QFADKL  209 (393)
T ss_dssp             GCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTE-ETTS--SSEEEEECCTTSSSCSSSCEEEEESCH-----HHHHHH
T ss_pred             CCcCCHHHHHHHHHHcCCeEEEECccccCCeECCe-ecCC--CCeEEEeCCCCCccccccceEEEeCCH-----HHHHHH
Confidence            34679999999999999999999998877654321 1111  799999999  9998889999999742     455544


Q ss_pred             cccccCC--------------------CCCC-ChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec
Q 009673          341 NNAVFPG--------------------LQGG-PHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS  399 (529)
Q Consensus       341 ~~~~~p~--------------------~~g~-p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~  399 (529)
                      ......+                    ..|. .....+.+ +.++..+  ..+++..++..++++++.+.|.+.++++..
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-a~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  286 (393)
T 1mdo_A          210 RSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNA-AIALAQL--QKLDALNARRAAIAAQYHQAMADLPFQPLS  286 (393)
T ss_dssp             HHHTBTTEECC-----------CCEESSCCCBCCCCHHHH-HHHHHHH--HTHHHHHHHHHHHHHHHHHHHHTSSCEECC
T ss_pred             HHHHhcCCcccchhhhcccccccccccccCccCCCCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence            3211100                    0111 00111211 1122222  235566777788899999999887777653


Q ss_pred             CC-----CCCceEEEccCCC--CCcHHHHHHhHhcCCeEEcCCCCCCCC----------CCC------CCCeEEEccCCC
Q 009673          400 GG-----SDNHLVLVDLRPM--GIDGARVEKILDMASITLNKNSVPGDK----------SAL------VPGGIRIGSPAM  456 (529)
Q Consensus       400 ~g-----t~~~~~~v~~~~~--~i~~~~~~~~L~~~GI~v~~~~~Pg~~----------~~~------~~~~iRig~~~~  456 (529)
                      ..     ...+++++.+...  +.+..++.+.|.+.||.+.....|...          ...      ....|||++...
T Consensus       287 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~  366 (393)
T 1mdo_A          287 LPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPD  366 (393)
T ss_dssp             CCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTT
T ss_pred             CCCCCCCceeEEEEEEecccccccCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCC
Confidence            11     2234566666420  456778888898899998765433100          000      134799997643


Q ss_pred             ccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          457 TTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       457 tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                          ++++|++++++.|++++...
T Consensus       367 ----~t~~~i~~~~~~l~~~~~~~  386 (393)
T 1mdo_A          367 ----MTESDFDRVITALHQIAGQG  386 (393)
T ss_dssp             ----CCHHHHHHHHHHHHHHHC--
T ss_pred             ----CCHHHHHHHHHHHHHHHhcC
Confidence                45899999999999887643

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=99.93  E-value=8.1e-24  Score=220.43  Aligned_cols=331  Identities=17%  Similarity=0.168  Sum_probs=220.6

Q ss_pred             eeEecCCC-C--CcHHHHHHHhhhhhccCCCCCCCCC-CCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHH
Q 009673          105 LELIASEN-F--TSRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA  180 (529)
Q Consensus       105 i~L~asen-~--~~~~V~eal~~~l~~~y~~G~p~~r-~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A  180 (529)
                      +++..+++ .  .+|.|++++...+.+ +..+..+.+ .|+..+...+++    +.+++++|.+.     +|.+++|+.+
T Consensus        49 i~~~~~~~~~~~~~p~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~----~~la~~~~~~~-----~i~~~sG~~a  118 (401)
T 2bwn_A           49 TVWCGNDYLGMGQHPVVLAAMHEALEA-VGAGSGGTRNISGTTAYHRRLE----AEIAGLHQKEA-----ALVFSSAYNA  118 (401)
T ss_dssp             EECSCSCTTSGGGCHHHHHHHHHHHHH-HCSCCCSBTTTBCCBHHHHHHH----HHHHHHTTCSE-----EEEESCHHHH
T ss_pred             EEeeCCCcccCCCCHHHHHHHHHHHHH-cCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCc-----EEEECCcHHH
Confidence            44444444 1  467899999887754 211111111 133334444444    77888998742     4667999998


Q ss_pred             HHHHHHhhc--CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEE
Q 009673          181 NFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLI  255 (529)
Q Consensus       181 ~~~~l~all--~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~---~~pklI  255 (529)
                      +..++.++.  +|||+|++.++.|++...        .+...|.  +++.++.+      |++++++.++.   .++++|
T Consensus       119 ~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~------d~~~le~~l~~~~~~~~~~v  182 (401)
T 2bwn_A          119 NDATLSTLRVLFPGLIIYSDSLNHASMIE--------GIKRNAG--PKRIFRHN------DVAHLRELIAADDPAAPKLI  182 (401)
T ss_dssp             HHHHHHHHHHHSTTCEEEEETTCCHHHHH--------HHHHSCC--CEEEECTT------CHHHHHHHHHHSCTTSCEEE
T ss_pred             HHHHHHHHhcCCCCCEEEECchhhHHHHH--------HHHHcCC--eEEEEcCC------CHHHHHHHHHhhccCCceEE
Confidence            888877663  699999999988765432        2233454  55555542      78999988873   278999


Q ss_pred             EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccc-cc--c-CCCC-CcccEEEecccccccCCCCeEEEeeC
Q 009673          256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV--V-ADPF-KYCDVVTTTTHKSLRGPRGGMIFFKK  328 (529)
Q Consensus       256 i~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~~--~-~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~  328 (529)
                      ++++++||+  ..|+++|.++|++||+++|+|++|..|.... +.  . ...+ +..|++++|++|++. ..||++++++
T Consensus       183 ~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~-~~GG~~~~~~  261 (401)
T 2bwn_A          183 AFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYG-VFGGYIAASA  261 (401)
T ss_dssp             EEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTC-SCCEEEEECH
T ss_pred             EEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhcc-CCCCEEecCH
Confidence            998888775  7899999999999999999999998665321 11  0 0011 135899999999985 4569999876


Q ss_pred             CCcchhHHHhhhcccc--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673          329 DPVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL  406 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~  406 (529)
                            ++.+.+....  +....+++. ..++++..+++.....++++..+++.++++++.+.|++.|++++.+  ..++
T Consensus       262 ------~~~~~l~~~~~~~~~~~~~~~-~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~  332 (401)
T 2bwn_A          262 ------RMVDAVRSYAPGFIFSTSLPP-AIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMPIIDH--GSHI  332 (401)
T ss_dssp             ------HHHHHHHHHCHHHHTSBCCCH-HHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC--SSSC
T ss_pred             ------HHHHHHHHhCcCceecCCCCH-HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCCCcccCC--CCCe
Confidence                  5665554211  111233444 4556666678776554557888999999999999998888877653  2346


Q ss_pred             EEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          407 VLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       407 ~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +++.+.. +.+..++.+.| +++||.+.....|+.  +...+.+||+++..+    +++|++++++.|+++++
T Consensus       333 ~~~~~~~-~~~~~~~~~~L~~~~gi~v~~~~~~~~--~~~~~~iRis~~~~~----t~~~i~~~~~~l~~~~~  398 (401)
T 2bwn_A          333 VPVVIGD-PVHTKAVSDMLLSDYGVYVQPINFPTV--PRGTERLRFTPSPVH----DLKQIDGLVHAMDLLWA  398 (401)
T ss_dssp             EEEECCC-HHHHHHHHHHHHHHHCEECCEECTTTS--CTTCCEEEECCCTTS----CHHHHHHHHHHHHHHC-
T ss_pred             EEEEeCC-hHHHHHHHHHHHhcCCEEEeecCCCCC--CCCCceEEEEeeCCC----CHHHHHHHHHHHHHHHH
Confidence            7777642 23456677777 588999865433321  112358999987543    58999999999988764

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=99.92  E-value=6.5e-24  Score=220.98  Aligned_cols=337  Identities=13%  Similarity=0.022  Sum_probs=219.3

Q ss_pred             hcceeEecCC-C---CCcHHHHHHHhhhhhccC--CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecC
Q 009673          102 FKSLELIASE-N---FTSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL  175 (529)
Q Consensus       102 ~~~i~L~ase-n---~~~~~V~eal~~~l~~~y--~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~  175 (529)
                      ++.|+|..+. +   +.++.+.+++...+....  ..+|+.      .....+++    +.+++++|++++    +|.++
T Consensus        32 ~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~------~~~~~~l~----~~la~~~g~~~~----~v~~~   97 (397)
T 2zyj_A           32 PGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSP------TEGYAPLR----AFVAEWIGVRPE----EVLIT   97 (397)
T ss_dssp             TTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCC------TTCCHHHH----HHHHHHHTSCGG----GEEEE
T ss_pred             CCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCC------CCCCHHHH----HHHHHHhCCChh----hEEEe
Confidence            3568886543 2   257889999887765311  112322      11123444    566777787654    45557


Q ss_pred             ChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcE
Q 009673          176 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKL  254 (529)
Q Consensus       176 sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pkl  254 (529)
                      +|+ +|+..++.++++|||+|++.+|.|.++..        .+...|.  +++.+++++ + .+|+++|++.+++.++++
T Consensus        98 ~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~-~-~~d~~~l~~~l~~~~~~~  165 (397)
T 2zyj_A           98 TGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQ--------AFRLQGP--RFLTVPAGE-E-GPDLDALEEVLKRERPRF  165 (397)
T ss_dssp             SHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTCC--EEEEEEEET-T-EECHHHHHHHHHHCCCSC
T ss_pred             ccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH--------HHHHcCC--EEEecCcCC-C-CCCHHHHHHHHhhcCCeE
Confidence            776 89999999999999999999988755421        2233454  566666653 3 399999999998657898


Q ss_pred             EE-EcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCCC--ccc------EEEeccccccc-CC
Q 009673          255 II-AGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCD------VVTTTTHKSLR-GP  319 (529)
Q Consensus       255 Ii-~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aD------iv~~S~hK~l~-Gp  319 (529)
                      |+ ++.++||+  ..+   +++|.++|++||+++|+|++|..+ ...+..+.++.  ..|      ++++|+||++. |.
T Consensus       166 v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~-~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~  244 (397)
T 2zyj_A          166 LYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYREL-YFGEARLPSLFELAREAGYPGVIYLGSFSKVLSPGL  244 (397)
T ss_dssp             EEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTC-BCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTCGGG
T ss_pred             EEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccc-cCCCCCCCchhhhCcccCCCeEEEEecccccccccc
Confidence            74 56777775  455   558999999999999999997643 32222111221  122      88899999984 56


Q ss_pred             CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc---CcE
Q 009673          320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL---GYK  396 (529)
Q Consensus       320 rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~---G~~  396 (529)
                      |.|++++++      ++.+.+.........+++... .+++..+++.......++..+++.++++.+.+.|++.   |+.
T Consensus       245 r~G~~~~~~------~~~~~l~~~~~~~~~~~~~~~-~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~  317 (397)
T 2zyj_A          245 RVAFAVAHP------EALQKLVQAKQGADLHTPMLN-QMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVR  317 (397)
T ss_dssp             CCEEEECCH------HHHHHHHHHHHHHHSSCCHHH-HHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSE
T ss_pred             eeEEEecCH------HHHHHHHHHHHhhcCCCCHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeE
Confidence            789999987      676666543222222333333 3333334542100234667777888899999999874   788


Q ss_pred             EecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          397 LVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       397 v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      +..+. ..+++++++.. +.+..++.+.|.+.||.+..+...+. .+..++++||++...     +++|++++++.|.++
T Consensus       318 ~~~~~-~g~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~f~~-~~~~~~~iRis~~~~-----~~~~i~~~~~~l~~~  389 (397)
T 2zyj_A          318 YTRPK-GGMFVWMELPK-GLSAEGLFRRALEENVAFVPGGPFFA-NGGGENTLRLSYATL-----DREGIAEGVRRLGRA  389 (397)
T ss_dssp             ECCCS-BSSEEEEECST-TCCHHHHHHHHHHTTEEEEESGGGCT-TSCCTTEEEEECSSS-----CHHHHHHHHHHHHHH
T ss_pred             EccCC-ccEEEEEEcCC-CCCHHHHHHHHHHCCCEEechHHhcC-CCCCCCeEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence            76542 34567777753 55677788888778999965432111 012357899997643     589999999999988


Q ss_pred             HHHH
Q 009673          477 VEIT  480 (529)
Q Consensus       477 ~~~~  480 (529)
                      ++..
T Consensus       390 l~~~  393 (397)
T 2zyj_A          390 LKGL  393 (397)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7643

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=99.92  E-value=4.3e-24  Score=226.12  Aligned_cols=339  Identities=14%  Similarity=0.122  Sum_probs=211.0

Q ss_pred             cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCChH
Q 009673          103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGS  178 (529)
Q Consensus       103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V~~~sGs  178 (529)
                      +.|+|..+++  .+++.|++++...+.+...  ..+...|+......++++.+.+++.  +|.  +++    +|.+++|+
T Consensus        70 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~--~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~----~i~~t~G~  141 (449)
T 3qgu_A           70 KIISLGIGDTTEPLPKYIADAMAKAAAGLAT--REGYSGYGAEQGQGALREAVASTFY--GHAGRAAD----EIFISDGS  141 (449)
T ss_dssp             CCEECSSCCCCCCCCHHHHHHHHHHHHGGGG--SCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGG----GEEEESCH
T ss_pred             CEEEeeCCCCCCCCCHHHHHHHHHHHHhhcc--ccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHH----HEEEccCH
Confidence            4688887775  3689999999887753211  0111113222223566644444443  344  443    45567776


Q ss_pred             -HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccce--------EEEEEcccCCC-CCCCCHHHHHHHhh
Q 009673          179 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY--------FESMPYRLDES-TGLVDYDMLEKTAI  248 (529)
Q Consensus       179 -~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~--------~~~v~~~v~~~-~~~iD~d~le~~i~  248 (529)
                       +++..+ .++++|||+|++++|.|.++..        .+...|..        ++++.++++.+ ++..|++++     
T Consensus       142 ~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  207 (449)
T 3qgu_A          142 KCDIARI-QMMFGSKPTVAVQDPSYPVYVD--------TSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----  207 (449)
T ss_dssp             HHHHHHH-HHHHCSSSCEEEEESCCTHHHH--------HHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----
T ss_pred             HHHHHHH-HHHhCCCCEEEEcCCCChhHHH--------HHHHcCCcccccccccceeEEEecccccCCcCChhHc-----
Confidence             777766 8899999999999998876532        12223331        12555666543 345555432     


Q ss_pred             hcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC---C---cccEEEecccccc-
Q 009673          249 LFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K---YCDVVTTTTHKSL-  316 (529)
Q Consensus       249 ~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~---~aDiv~~S~hK~l-  316 (529)
                       .++++|+++.++||+  ..   ++++|+++|++||+++|+|++|.. +...+..+.++   .   ..++++.|+||++ 
T Consensus       208 -~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g  285 (449)
T 3qgu_A          208 -KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYAL-YISNPDCPKTIYEIPGADEVAIETCSFSKYAG  285 (449)
T ss_dssp             -CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGG-GCCCTTSCSSGGGSTTGGGTEEEEEECSGGGT
T ss_pred             -CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHh-hhcCCCCCCCHhhccCCCCcEEEEecchhhcC
Confidence             378999998889987  34   488888999999999999999654 33333212121   1   3468999999997 


Q ss_pred             -cCCCCeEEEeeCCCcch--hHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc
Q 009673          317 -RGPRGGMIFFKKDPVLG--VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL  393 (529)
Q Consensus       317 -~GprgG~i~~~~~~~~~--~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~  393 (529)
                       +|+|.|+++++++....  ..+...+.........+.+.. ..++...+++.......++..+++.++++.+.+.|++.
T Consensus       286 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  364 (449)
T 3qgu_A          286 FTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNI-VQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM  364 (449)
T ss_dssp             CTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHH-HHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CccceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHH-HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence             58889999998842100  000111221111112233333 33333334433111345778888999999999999998


Q ss_pred             CcEEecCCCCCceEEEccCCCCCcHHHHH-HhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673          394 GYKLVSGGSDNHLVLVDLRPMGIDGARVE-KILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF  472 (529)
Q Consensus       394 G~~v~~~gt~~~~~~v~~~~~~i~~~~~~-~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~  472 (529)
                      |+.+..+ ...+++|+++.  +.+..++. .+++++||.+.++..++   +..+++|||++.      .++++++++++.
T Consensus       365 g~~~~~~-~~~~~~~~~~~--~~~~~~~~~~l~~~~gI~v~pg~~f~---~~~~~~iRis~~------~~~e~i~~~l~~  432 (449)
T 3qgu_A          365 GFSVYGG-DDAPYIWVGFP--GKPSWDVFAEILERCNIVTTPGSGYG---PAGEGFVRASAF------GSRENILEAVRR  432 (449)
T ss_dssp             TCCEEES-SSSSEEEEECT--TSCHHHHHHHHHHHHCEECEEGGGGC---GGGTTEEEEECC------SCHHHHHHHHHH
T ss_pred             CCeeeCC-CCeeEEEEECC--CCCHHHHHHHHHHHCCEEEecchHhC---CCCCCeEEEEec------CCHHHHHHHHHH
Confidence            9887754 23567788875  55666665 45566799986543222   224689999942      258999999999


Q ss_pred             HHHHHH
Q 009673          473 IHEGVE  478 (529)
Q Consensus       473 i~~~~~  478 (529)
                      |+++++
T Consensus       433 l~~~~~  438 (449)
T 3qgu_A          433 FKEAYG  438 (449)
T ss_dssp             HHHHHC
T ss_pred             HHHHHH
Confidence            988875

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=99.92  E-value=2.7e-23  Score=218.66  Aligned_cols=304  Identities=13%  Similarity=0.065  Sum_probs=202.5

Q ss_pred             HHHHHHHHHHHHHcCCCCCCC-----ceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          148 ELETLCQKRALAAFNLDENKW-----GVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       148 ~lE~~a~~~la~~~g~~~~~~-----~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      ++.+...+++++.+|.+.++.     ..+|.+++|+ +|+..++.++++|||+|++.+|.|.++.        ..+...|
T Consensus        82 ~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--------~~~~~~g  153 (425)
T 2r2n_A           82 ELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTL--------QSLHPLG  153 (425)
T ss_dssp             HHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHH--------HHHGGGT
T ss_pred             HHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHH--------HHHHHcC
Confidence            455556688888889875210     0246667776 8999999999999999999999875542        1234455


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhh-----------cCCcEEEE-cCCCCCC--CCC---HHHHHHHHHHhCCEEEE
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAIL-----------FRPKLIIA-GASAYPR--DFD---YPRMRQIADAVGALLMM  284 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~-----------~~pklIi~-~~s~~p~--~~d---~~~i~~ia~~~g~~liv  284 (529)
                      .  +++.++++.  ..+|+++|++.++.           .++++|++ .+++||+  ..+   +++|.++|++||++||+
T Consensus       154 ~--~~~~v~~~~--~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~  229 (425)
T 2r2n_A          154 C--NIINVASDE--SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIE  229 (425)
T ss_dssp             C--EEEEECEET--TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             C--EEEEeCcCC--CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence            4  666776653  24899999999872           25888877 4778886  555   45899999999999999


Q ss_pred             ecccccccccccccCCCC---C--cccEEEecccccc-cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHH
Q 009673          285 DMAHISGLVAASVVADPF---K--YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIG  358 (529)
Q Consensus       285 D~ah~~Gli~~~~~~~~~---~--~aDiv~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~ia  358 (529)
                      |++|. ++.+.+....++   +  +.+++++|+||++ +|+|.||+++++      ++.+.+.........+. +....+
T Consensus       230 De~~~-~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~------~l~~~l~~~~~~~~~~~-~~~~q~  301 (425)
T 2r2n_A          230 DDPYY-FLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPK------PLIERVILHIQVSTLHP-STFNQL  301 (425)
T ss_dssp             ECTTG-GGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEH------HHHHHHHHHHHTTTCSS-CHHHHH
T ss_pred             ECCcc-cccCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCH------HHHHHHHHHHHHhcCCC-CHHHHH
Confidence            99965 333333211122   1  2358899999998 577889999998      67666654322222233 333444


Q ss_pred             HHHHHHHHhcC----chHHHHHHHHHHHHHHHHHHHHhc--CcE-EecCCCCCceEEEccCCCCCcHHH-HHHhHhcCCe
Q 009673          359 GLAVCLKHAQS----PEFKVYQNKVVSNCRALASRLVEL--GYK-LVSGGSDNHLVLVDLRPMGIDGAR-VEKILDMASI  430 (529)
Q Consensus       359 ala~al~~~~~----~~~~~~~~~i~~~a~~l~~~L~~~--G~~-v~~~gt~~~~~~v~~~~~~i~~~~-~~~~L~~~GI  430 (529)
                      ++..+|+....    ...++..+++.++++.+.+.|++.  |+. +..+ ...+++|+++.. ..+..+ +.+.|.++||
T Consensus       302 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p-~~g~~~~~~~~~-~~~~~~~~~~~l~~~gv  379 (425)
T 2r2n_A          302 MISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVP-AAGMFLWIKVKG-INDVKELIEEKAVKMGV  379 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCC-SBSSEEEEEETT-CSCCHHHHHTHHHHTTE
T ss_pred             HHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCC-CceEEEEEEeCC-CCCHHHHHHHHHHHCCc
Confidence            44455654211    223556677788889999999873  763 4333 335667888753 234444 6788889999


Q ss_pred             EEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          431 TLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       431 ~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .+..+...+.......+++||++..     .++++++++++.|.++++
T Consensus       380 ~v~pg~~f~~~~~~~~~~iRis~~~-----~~~~~i~~~~~~l~~~l~  422 (425)
T 2r2n_A          380 LMLPGNAFYVDSSAPSPYLRASFSS-----ASPEQMDVAFQVLAQLIK  422 (425)
T ss_dssp             ECEEGGGGSSSTTSCCCEEEEECSS-----CCHHHHHHHHHHHHHHHH
T ss_pred             EEechhhhcCCCCCCCCEEEEEeCC-----CCHHHHHHHHHHHHHHHH
Confidence            9965432221111124789999653     358999999999998875

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=99.92  E-value=6.4e-24  Score=223.96  Aligned_cols=345  Identities=15%  Similarity=0.086  Sum_probs=216.2

Q ss_pred             cceeEecCCCC-CcHHHHHHHhhhhhccC-C-CCCCCC---CCCCCchhHHHHHHHHHHHHHHHcC----CCCCCCceee
Q 009673          103 KSLELIASENF-TSRAVMEAVGSCLTNKY-S-EGLPGK---RYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNV  172 (529)
Q Consensus       103 ~~i~L~asen~-~~~~V~eal~~~l~~~y-~-~G~p~~---r~~~g~~~~d~lE~~a~~~la~~~g----~~~~~~~~~V  172 (529)
                      ..|+|..++|+ ..+.+.+++........ . +|..+.   ..|+......++++...+++.+.+|    ++.+    +|
T Consensus        39 ~~i~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~----~v  114 (435)
T 3piu_A           39 GIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPN----HL  114 (435)
T ss_dssp             SBEECSSCCCCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGG----GE
T ss_pred             CeEEeccccccccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHH----HE
Confidence            35788888886 46677777765432111 0 010000   0122222235667555566665544    4443    34


Q ss_pred             ecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccc-cccceEEEEEcccCCC-CCCCCHHHHHHHhhh
Q 009673          173 QPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDES-TGLVDYDMLEKTAIL  249 (529)
Q Consensus       173 ~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~-~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~  249 (529)
                      .+++|+ +|+..++.++++|||+|++.+|.|.++..        .+. ..|.  +++.++++++ ++.+|+++|++.+++
T Consensus       115 ~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~  184 (435)
T 3piu_A          115 VLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDR--------DLKWRTGV--EIVPIHCTSSNGFQITETALEEAYQE  184 (435)
T ss_dssp             EEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HTTTTTCC--EEEEEECCGGGTSCCCHHHHHHHHHH
T ss_pred             EEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHH--------HHHHhcCC--EEEEeeCCCccCCcCCHHHHHHHHHH
Confidence            445555 99999999999999999999998865531        122 3454  6666666543 367899999999976


Q ss_pred             c-----CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC-C--------------c
Q 009673          250 F-----RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K--------------Y  304 (529)
Q Consensus       250 ~-----~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-~--------------~  304 (529)
                      .     ++++|+++.++||+  ..   ++++|.++|++||++||+|++|..+ ...+....++ .              .
T Consensus       185 ~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~  263 (435)
T 3piu_A          185 AEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGT-AFSSPSFISVMEVLKDRNCDENSEVWQ  263 (435)
T ss_dssp             HHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGG-CCSSSCCCCHHHHHHC-------CGGG
T ss_pred             HHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCCCCCcCHHHhccccccccccCCCC
Confidence            3     78899888888886  43   3688889999999999999997543 3222111111 0              1


Q ss_pred             ccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc--CchHHHHHHHHH
Q 009673          305 CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ--SPEFKVYQNKVV  380 (529)
Q Consensus       305 aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~--~~~~~~~~~~i~  380 (529)
                      ..++++|+||+|  +|.|.|+++++++     ++.+.+......+  +. +....++++.++....  ....++..+++.
T Consensus       264 ~~i~i~s~sK~~g~~G~r~G~~~~~~~-----~~~~~~~~~~~~~--~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  335 (435)
T 3piu_A          264 RVHVVYSLSKDLGLPGFRVGAIYSNDD-----MVVAAATKMSSFG--LV-SSQTQHLLSAMLSDKKLTKNYIAENHKRLK  335 (435)
T ss_dssp             GEEEEEESSSSSCCGGGCEEEEEESCH-----HHHHHHHHHGGGS--CC-CHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEeeecccCCCceeEEEEEeCCH-----HHHHHHHHHhhcC--CC-CHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence            128889999997  6788899999653     5655554432221  11 2223333333343111  112356677888


Q ss_pred             HHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCC-----cHHHHHHh-HhcCCeEEcCCCCCCCCCCCCCCeEEEccC
Q 009673          381 SNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGI-----DGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSP  454 (529)
Q Consensus       381 ~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i-----~~~~~~~~-L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~  454 (529)
                      ++++.+.+.|.+.|+++..+ ..++++++++.....     +..++.+. ++++||.+..+..++   +..++.+||++.
T Consensus       336 ~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRi~~~  411 (435)
T 3piu_A          336 QRQKKLVSGLQKSGISCLNG-NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCH---CTEPGWFRVCFA  411 (435)
T ss_dssp             HHHHHHHHHHHTTTCEECCC-CSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGT---CSSTTEEEEECS
T ss_pred             HHHHHHHHHHHhcCCcccCC-CeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccC---CCCCCEEEEEee
Confidence            88999999999889987754 234667777753110     23344444 466699986543221   234688999975


Q ss_pred             CCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          455 AMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       455 ~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      .+     ++++++++++.|++++..
T Consensus       412 ~~-----~~e~i~~~l~~l~~~l~~  431 (435)
T 3piu_A          412 NL-----PERTLDLAMQRLKAFVGE  431 (435)
T ss_dssp             SS-----CHHHHHHHHHHHHHHHHH
T ss_pred             CC-----CHHHHHHHHHHHHHHHHH
Confidence            32     589999999999988764

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=99.92  E-value=2.9e-24  Score=224.15  Aligned_cols=330  Identities=18%  Similarity=0.151  Sum_probs=214.9

Q ss_pred             cceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673          103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF  182 (529)
Q Consensus       103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~  182 (529)
                      ..|++..+++..++.|++++...+...        +|.. .+...+++    +.+++++|.+.     .|.+++|++|+.
T Consensus        31 ~~id~~~~~~~~~~~v~~a~~~~~~~~--------~y~~-~~~~~~l~----~~la~~~~~~~-----~v~~~~Gt~a~~   92 (399)
T 2oga_A           31 PFLDLKAAYEELRAETDAAIARVLDSG--------RYLL-GPELEGFE----AEFAAYCETDH-----AVGVNSGMDALQ   92 (399)
T ss_dssp             CSCCHHHHHHHTHHHHHHHHHHHHHHT--------CCSS-SHHHHHHH----HHHHHHTTSSE-----EEEESCHHHHHH
T ss_pred             cccccCcCCCCCCHHHHHHHHHHHhcC--------CCCC-chhHHHHH----HHHHHHHCCCe-----EEEecCHHHHHH
Confidence            456666666666799999998877531        1221 23344444    67888999862     466789999999


Q ss_pred             HHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 009673          183 EVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA  261 (529)
Q Consensus       183 ~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~  261 (529)
                      .++.++ ++|||+|+++++.|.+...        .+...|.  +++.++++++++.+|+++|++.+++ ++++|+++++ 
T Consensus        93 ~~l~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~n~-  160 (399)
T 2oga_A           93 LALRGLGIGPGDEVIVPSHTYIASWL--------AVSATGA--TPVPVEPHEDHPTLDPLLVEKAITP-RTRALLPVHL-  160 (399)
T ss_dssp             HHHHHTTCCTTCEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCSSSSSBCHHHHHHHCCT-TEEEECCBCG-
T ss_pred             HHHHHhCCCCcCEEEECCCccHHHHH--------HHHHCCC--EEEEEecCCCCCCcCHHHHHHhcCC-CCeEEEEeCC-
Confidence            999999 9999999999988765421        2334454  6677777755678999999999987 7888876432 


Q ss_pred             CCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccc--ccccCC-CCeEEEeeCCCcchhHHHh
Q 009673          262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGP-RGGMIFFKKDPVLGVELES  338 (529)
Q Consensus       262 ~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~h--K~l~Gp-rgG~i~~~~~~~~~~~l~~  338 (529)
                      .+...|+++|.++|+++|+++|+|++|..|....+....  ...|++++|+|  |+++++ ++|+++++++     ++.+
T Consensus       161 tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~--~~~di~~~S~~~sK~~~~~G~~g~~~~~~~-----~~~~  233 (399)
T 2oga_A          161 YGHPADMDALRELADRHGLHIVEDAAQAHGARYRGRRIG--AGSSVAAFSFYPGKNLGCFGDGGAVVTGDP-----ELAE  233 (399)
T ss_dssp             GGCCCCHHHHHHHHHHHTCEECEECTTCTTCEETTEETT--CTTCEEEEECCTTSSSCCSSCCEEEEESCH-----HHHH
T ss_pred             cCCccCHHHHHHHHHHcCCEEEEECcccccCccCCeecc--cccCEEEEeCCCCccCCcCCceEEEEeCCH-----HHHH
Confidence            233789999999999999999999998877543221111  13699999995  998553 8899998743     5655


Q ss_pred             hhcccccCC-----------CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCce
Q 009673          339 AINNAVFPG-----------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHL  406 (529)
Q Consensus       339 ~i~~~~~p~-----------~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~  406 (529)
                      ++......+           ....++....+++..+++.     ++++.++..++++++.+.|.+. |+.+.........
T Consensus       234 ~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~  308 (399)
T 2oga_A          234 RLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAH-----LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDP  308 (399)
T ss_dssp             HHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEEC
T ss_pred             HHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcc
Confidence            543321111           1112233333333334432     3455667777788888888774 7766432111222


Q ss_pred             EEEccCCCCCcHHHHHHhHhcCCeEEcCCC-CCCCC-----------CCC------CCCeEEEccCCCccCCCCHHHHHH
Q 009673          407 VLVDLRPMGIDGARVEKILDMASITLNKNS-VPGDK-----------SAL------VPGGIRIGSPAMTTRGFSEKEFVA  468 (529)
Q Consensus       407 ~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~-~Pg~~-----------~~~------~~~~iRig~~~~tt~g~~~~d~~~  468 (529)
                      .|+.+.....+..++.+.|.+.||.+.... .|.+.           ...      ..+.|||+++..    .+++|+++
T Consensus       309 ~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~----~t~edi~~  384 (399)
T 2oga_A          309 VWHLFTVRTERRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPH----LERPQALR  384 (399)
T ss_dssp             CCSSEEEECSSHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTT----CCHHHHHH
T ss_pred             eeEEEEEECCCHHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCC----CCHHHHHH
Confidence            221221112256788888988999986532 11000           000      025799997654    45899999


Q ss_pred             HHHHHHHHHH
Q 009673          469 IADFIHEGVE  478 (529)
Q Consensus       469 la~~i~~~~~  478 (529)
                      +++.|++++.
T Consensus       385 ~~~~l~~~~~  394 (399)
T 2oga_A          385 VIDAVREWAE  394 (399)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998775

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.92  E-value=8.6e-25  Score=225.33  Aligned_cols=325  Identities=12%  Similarity=0.095  Sum_probs=213.8

Q ss_pred             ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673          104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE  183 (529)
Q Consensus       104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~  183 (529)
                      .+++..+.+..++ +++++...+....         |...+...+++    +.+++++|.+.     .+.+++|++|+..
T Consensus         8 ~~~l~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~a~~~   68 (374)
T 3uwc_A            8 YSYLERQFADIEP-YLNDLREFIKTAD---------FTLGAELEKFE----KRFAALHNAPH-----AIGVGTGTDALAM   68 (374)
T ss_dssp             SCCHHHHTSSCHH-HHHHHHHHHHHTC---------CSSCHHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHH
T ss_pred             eeccccCCCCchH-HHHHHHHHHHcCC---------cccChhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHH
Confidence            4555556666667 8898887765431         22234445555    67888999873     3567889999999


Q ss_pred             HHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673          184 VYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY  262 (529)
Q Consensus       184 ~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~  262 (529)
                      ++.++ ++|||+|+++++.|.++..        .+...|.  +++.++++ +++.+|++++++.+++ ++++|+   ++|
T Consensus        69 ~~~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~~~~-~~~~v~---~~n  133 (374)
T 3uwc_A           69 SFKMLNIGAGDEVITCANTFIASVG--------AIVQAGA--TPVLVDSE-NGYVIDPEKIEAAITD-KTKAIM---PVH  133 (374)
T ss_dssp             HHHHTTCCTTCEEEEESSSCHHHHH--------HHHHTTC--EEEEECBC-TTSSBCGGGTGGGCCT-TEEEEC---CBC
T ss_pred             HHHHcCCCCCCEEEECCCccHHHHH--------HHHHcCC--EEEEEecC-CCCCcCHHHHHHhCCC-CceEEE---EeC
Confidence            99999 9999999999998765431        2334554  67777776 6788999999999987 788887   334


Q ss_pred             CC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccc--ccccC-CCCeEEEeeCCCcchhHHH
Q 009673          263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRG-PRGGMIFFKKDPVLGVELE  337 (529)
Q Consensus       263 p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~h--K~l~G-prgG~i~~~~~~~~~~~l~  337 (529)
                      |+  ..|+++|.++|+++|+++|+|++|..|....+....  ..+|++++|+|  |++++ +.+|+++++++     ++.
T Consensus       134 ~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~--~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~-----~~~  206 (374)
T 3uwc_A          134 YTGNIADMPALAKIAKKHNLHIVEDACQTILGRINDKFVG--SWGQFACFSLHPLKNLNVWSDAGVIITHSD-----EYA  206 (374)
T ss_dssp             GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETT--SSSSEEEEECSSSSSSCCSSCCEEEEESCH-----HHH
T ss_pred             CcCCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCeecc--ccccEEEEeCCCCCcCCccceeEEEEeCCH-----HHH
Confidence            43  779999999999999999999999877553221111  13699999988  99977 56899988763     454


Q ss_pred             hhhcccccCCC-------CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC--cEEecCCCC---C-
Q 009673          338 SAINNAVFPGL-------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLVSGGSD---N-  404 (529)
Q Consensus       338 ~~i~~~~~p~~-------~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G--~~v~~~gt~---~-  404 (529)
                      +++......+.       ..+.+. .+.++..++.......++++.++..++++.+.+.|.+.+  +.+......   . 
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  285 (374)
T 3uwc_A          207 EKLRLYRNHGLINRDVCVEYGINC-RMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVF  285 (374)
T ss_dssp             HHHHHHTBTTEEETTEESSCCCBC-BCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCC
T ss_pred             HHHHHHHhcCccccCccccccccC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceee
Confidence            44432211100       001100 111222222222234567778888888999999998754  665432111   1 


Q ss_pred             ceEEEccCCCCCcHHHHHHhHhcCCeEEcCCC-CCCCCCC-C----------------CCCeEEEccCCCccCCCCHHHH
Q 009673          405 HLVLVDLRPMGIDGARVEKILDMASITLNKNS-VPGDKSA-L----------------VPGGIRIGSPAMTTRGFSEKEF  466 (529)
Q Consensus       405 ~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~-~Pg~~~~-~----------------~~~~iRig~~~~tt~g~~~~d~  466 (529)
                      +.+.+..    .+...+.+.|.++||.+...+ .|....+ +                ..+.+||+++..    ++++|+
T Consensus       286 ~~~~~~~----~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~----~t~edi  357 (374)
T 3uwc_A          286 HIYVLRV----KYRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPY----LTEEEI  357 (374)
T ss_dssp             SSEEEEE----TTHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTT----SCHHHH
T ss_pred             EEEEEEc----CCHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCC----CCHHHH
Confidence            1122222    156788899999999987653 1111100 0                015799987654    458999


Q ss_pred             HHHHHHHHHHHH
Q 009673          467 VAIADFIHEGVE  478 (529)
Q Consensus       467 ~~la~~i~~~~~  478 (529)
                      +++++.|+++++
T Consensus       358 ~~~~~~l~~~l~  369 (374)
T 3uwc_A          358 NYIIKKVREFYL  369 (374)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999999875

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.92  E-value=3e-25  Score=229.09  Aligned_cols=319  Identities=13%  Similarity=0.073  Sum_probs=208.6

Q ss_pred             CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cC
Q 009673          112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LK  190 (529)
Q Consensus       112 n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~  190 (529)
                      +.+++.+++++...+...+         |...+...++|    +.+++++|.+.     .+.++||++|+..++.++ ++
T Consensus        13 ~~~~~~~~~a~~~~~~~~~---------~~~~~~~~~l~----~~la~~~~~~~-----~i~~~sgt~al~~~l~~l~~~   74 (373)
T 3frk_A           13 DEIEYEIKFKFEEIYKRNW---------FILGDEDKKFE----QEFADYCNVNY-----CIGCGNGLDALHLILKGYDIG   74 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHTC---------CSSSHHHHHHH----HHHHHHHTSSE-----EEEESCHHHHHHHHHHHTTCC
T ss_pred             CCCCHHHHHHHHHHHHCCC---------ccCCchHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCC
Confidence            3457888888887775432         12234455555    77888999863     356688999999999999 99


Q ss_pred             CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHH
Q 009673          191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPR  270 (529)
Q Consensus       191 pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~  270 (529)
                      |||+|++++++|.+...        .+...|.  +++.++++++++.+|+++|++.+++ ++++|+++++ .+...|+++
T Consensus        75 ~gd~Vi~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~n~-~G~~~~l~~  142 (373)
T 3frk_A           75 FGDEVIVPSNTFIATAL--------AVSYTGA--KPIFVEPDIRTYNIDPSLIESAITE-KTKAIIAVHL-YGQPADMDE  142 (373)
T ss_dssp             TTCEEEEETTSCTHHHH--------HHHHHSC--EEEEECEETTTTEECGGGTGGGCCT-TEEEEEEECC-TTCCCCHHH
T ss_pred             CcCEEEECCCCcHHHHH--------HHHHcCC--EEEEEeccccccCcCHHHHHHhcCC-CCeEEEEECC-CcCcccHHH
Confidence            99999999998866431        2334454  7777778767789999999999987 8898885432 334789999


Q ss_pred             HHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccc--ccccC-CCCeEEEeeCCCcchhHHHhhhcccccCC
Q 009673          271 MRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRG-PRGGMIFFKKDPVLGVELESAINNAVFPG  347 (529)
Q Consensus       271 i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~h--K~l~G-prgG~i~~~~~~~~~~~l~~~i~~~~~p~  347 (529)
                      |.++|+++|++||+|++|+.|....+....  ...|++++|+|  |++++ ++||+++++++     ++.+++......+
T Consensus       143 i~~l~~~~~~~li~D~a~~~g~~~~~~~~~--~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~-----~~~~~~~~~~~~g  215 (373)
T 3frk_A          143 IKRIAKKYNLKLIEDAAQAHGSLYKGMKVG--SLGDAAGFSFYPAKNLGSLGDGGAVVTNDK-----DLAEKIKALSNYG  215 (373)
T ss_dssp             HHHHHHHHTCEEEEECTTCTTCEETTEETT--SSSSEEEEECCTTSSSCCSSSCEEEEESCH-----HHHHHHHHHHBTT
T ss_pred             HHHHHHHcCCEEEEECCcccCCEECCEecc--ccccEEEEeCcCCCccCccceeEEEEeCCH-----HHHHHHHHHHhcC
Confidence            999999999999999999887653322111  13689888855  99977 67899998763     4544443221111


Q ss_pred             --------CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCC--CCC--ceEEEccCCCC
Q 009673          348 --------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG--SDN--HLVLVDLRPMG  415 (529)
Q Consensus       348 --------~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~g--t~~--~~~~v~~~~~~  415 (529)
                              ..|.+.  .+.++.+++.......+++..++..++++++.+.|.+.++.+....  ...  +.+.+..    
T Consensus       216 ~~~~~~~~~~g~~~--~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----  289 (373)
T 3frk_A          216 SEKKYHHIYKGFNS--RLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPNVIIPVEADYAKHVWYTFVIRS----  289 (373)
T ss_dssp             CSBTTBCCSCCCBC--CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTTEECCCCCTTEECCCSSEEEEE----
T ss_pred             cccCCccccccccC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEeccCCCCCceeeEEEEEEe----
Confidence                    011100  0111111222111234566777778888888888877665443211  111  1122222    


Q ss_pred             CcHHHHHHhHhcCCeEEcCCC-CCCCCCC-C----------------CCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          416 IDGARVEKILDMASITLNKNS-VPGDKSA-L----------------VPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       416 i~~~~~~~~L~~~GI~v~~~~-~Pg~~~~-~----------------~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      .+.+.+.+.|.+.||.++..+ .|.+..+ +                ..+.||+++...    ++++|++++++.|++..
T Consensus       290 ~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~----~t~~di~~~~~~l~~~~  365 (373)
T 3frk_A          290 EKRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYG----MKNEEIEYVIDKINAWK  365 (373)
T ss_dssp             SSHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTT----CCHHHHHHHHHHHHTCC
T ss_pred             CCHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCC----CCHHHHHHHHHHHHHHh
Confidence            156788999999999997653 2221100 0                015799987654    45899999999987654

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=99.92  E-value=3.5e-23  Score=223.30  Aligned_cols=304  Identities=11%  Similarity=0.065  Sum_probs=217.6

Q ss_pred             hhHHHHHHHHHHHHHHHcCCCC--CCCceeeecCChHHHHHHHHHhhcCCC--------CEEEEcCCCCCcccccccccc
Q 009673          144 EYIDELETLCQKRALAAFNLDE--NKWGVNVQPLSGSPANFEVYTAILKPH--------DRIMGLDLPHGGHLSHGFMTP  213 (529)
Q Consensus       144 ~~~d~lE~~a~~~la~~~g~~~--~~~~~~V~~~sGs~A~~~~l~all~pG--------D~Vl~~~~~~~g~~s~g~~~~  213 (529)
                      +...++|..+++++++++|++.  +.+ ..+.+++|++|+..++.++.++|        |+|++..+.|.+..       
T Consensus       135 p~~~~le~~l~~~la~~~g~~~~~~~v-~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~-------  206 (514)
T 3mad_A          135 PSTAKFEAEVVAMTAHMLGGDAAGGTV-CGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFD-------  206 (514)
T ss_dssp             HHHHHHHHHHHHHHHHHTTGGGGTSCC-EEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHH-------
T ss_pred             hHHHHHHHHHHHHHHHHcCCCCccCCc-ceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHH-------
Confidence            4456788888899999999984  222 11445666699999999998877        99999998876532       


Q ss_pred             ccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccc
Q 009673          214 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISG  291 (529)
Q Consensus       214 ~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~G  291 (529)
                       +.+...|.  +++.+++++ ++.+|+++|++++++ ++++|+++.++||+  ..|+++|.++|++||++||+|++|..+
T Consensus       207 -~~~~~~G~--~v~~v~~~~-~~~~d~~~Le~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~  281 (514)
T 3mad_A          207 -KAAQYFGI--KLVRTPLDA-DYRADVAAMREAITP-NTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGF  281 (514)
T ss_dssp             -HHHHHHTC--EEEEECBCT-TSCBCHHHHHHHCCT-TEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred             -HHHHHcCC--eeEEeeeCC-CCCCCHHHHHHHhcc-CCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccc
Confidence             23344565  566777764 789999999999987 89999999888765  789999999999999999999997654


Q ss_pred             ccc----ccccCCCC----CcccEEEecccccccCC-CCeEEEeeCCCcchhHHHhhhcc---------cccCCCCCCCh
Q 009673          292 LVA----ASVVADPF----KYCDVVTTTTHKSLRGP-RGGMIFFKKDPVLGVELESAINN---------AVFPGLQGGPH  353 (529)
Q Consensus       292 li~----~~~~~~~~----~~aDiv~~S~hK~l~Gp-rgG~i~~~~~~~~~~~l~~~i~~---------~~~p~~~g~p~  353 (529)
                      ...    .+....++    .++|++++|+||++.|+ +.|+++++++     .+......         ...+...|++.
T Consensus       282 ~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~gs~~  356 (514)
T 3mad_A          282 ILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRP-----DLLHYQYFIAADWPGGLYFSPTFAGSRP  356 (514)
T ss_dssp             THHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSH-----HHHTTTCEEESSCTTCSEEESSSCSSCC
T ss_pred             cchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCH-----HHhccccccccccCCCcccCCccCCCCc
Confidence            331    11100112    26899999999996555 4599998873     23221110         11123355666


Q ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEE
Q 009673          354 NHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITL  432 (529)
Q Consensus       354 ~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v  432 (529)
                      ...++++++++..+...++++..+++.++++++.+.|++. |++++.+.  ..++++..  .+.+..++.+.|.+.||.+
T Consensus       357 ~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~--~~~~~~~~--~~~~~~~l~~~L~~~Gi~v  432 (514)
T 3mad_A          357 GALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDP--LWVIAVAS--DELNIYQVMEEMAGRGWRL  432 (514)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCC--SSEEEEEC--SSSCHHHHHHHHHTTTCBC
T ss_pred             hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCC--eEEEEEeC--CCCCHHHHHHHHHhcCCEe
Confidence            6666677777776655667888999999999999999984 88887643  23444433  3557788888898889987


Q ss_pred             cCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          433 NKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       433 ~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      ...        ..+..+|++....+   .++++++++++.|++++...
T Consensus       433 ~g~--------~~~~~~Ri~~~~~~---~~~e~i~~~l~~L~~~l~~~  469 (514)
T 3mad_A          433 NGL--------HRPPAFHVALTLRH---TEPGVVDRFLADLQDAVAQV  469 (514)
T ss_dssp             EEE--------TTTTEEEEECCGGG---GSTTHHHHHHHHHHHHHHHH
T ss_pred             ccC--------CCCCeEEEEEecCC---CCHHHHHHHHHHHHHHHHHH
Confidence            321        12467999865333   34699999999999988754

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.92  E-value=6.7e-24  Score=222.61  Aligned_cols=330  Identities=16%  Similarity=0.140  Sum_probs=214.4

Q ss_pred             CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cC
Q 009673          112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LK  190 (529)
Q Consensus       112 n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~  190 (529)
                      .++++.+++++...+.+.....|+.  .++..+..++++    +++++++|.+.     .|.+++|++|+..++.++ ++
T Consensus        12 ~~~~~~~~~a~~~~~~~~~~~~~~~--~~g~~~l~~~l~----~~la~~~g~~~-----~i~~~~gt~al~~~~~~~~~~   80 (418)
T 2c81_A           12 PQHSDRTRRKIEEVFQSNRWAISGY--WTGEESMERKFA----KAFADFNGVPY-----CVPTTSGSTALMLALEALGIG   80 (418)
T ss_dssp             SCCCHHHHHHHHHHHHHTCCSTTSB--CCSSCCHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHTTCC
T ss_pred             CCCCHHHHHHHHHHHhcCCccccCc--ccCCHHHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHcCCC
Confidence            4568999999988876432111221  122222244444    78889999873     466789999999999999 89


Q ss_pred             CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHH
Q 009673          191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPR  270 (529)
Q Consensus       191 pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~  270 (529)
                      |||+|+++++.|.+...        .+...|.  +++.++++++++.+|+++|++.+++ ++++|+++++ .+...++++
T Consensus        81 ~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~-~G~~~~~~~  148 (418)
T 2c81_A           81 EGDEVIVPSLTWIATAT--------AVLNVNA--LPVFVDVEADTYCIDPQLIKSAITD-KTKAIIPVHL-FGSMANMDE  148 (418)
T ss_dssp             TTCEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTCSBCHHHHGGGCCT-TEEEECCBCC-TTCCCCHHH
T ss_pred             CcCEEEECCCccHhHHH--------HHHHcCC--EEEEEecCCCCCCcCHHHHHHhhCC-CCeEEEEeCC-cCCcccHHH
Confidence            99999999998765531        2334554  6777777755789999999999987 7898887643 344789999


Q ss_pred             HHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecc--cccccCCCCeEEEeeCCCcchhHHHhhhcccccC--
Q 009673          271 MRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTT--HKSLRGPRGGMIFFKKDPVLGVELESAINNAVFP--  346 (529)
Q Consensus       271 i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~--hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p--  346 (529)
                      |.++|+++|++||+|++|..+....+.....  ..|+++.|+  ||+++++++|+++++++     ++.+++......  
T Consensus       149 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~~~s~s~~K~~~~g~~g~~~~~~~-----~l~~~~~~~~~~~~  221 (418)
T 2c81_A          149 INEIAQEHNLFVIEDCAQSHGSVWNNQRAGT--IGDIGAFSCQQGKVLTAGEGGIIVTKNP-----RLFELIQQLRADSR  221 (418)
T ss_dssp             HHHHHHHTTCEEEEECTTCTTCEETTEETTS--SSSEEEEECCTTSSSCSSSCEEEEESCH-----HHHHHHHHHHBTTE
T ss_pred             HHHHHHHCCCEEEEECcccccCccCCEeccc--ccceEEEeccCCcccCCCCeEEEEECCH-----HHHHHHHHHHHhCc
Confidence            9999999999999999988775332211111  235666666  99986558899998642     454443321111  


Q ss_pred             ------------CC--------CCCC-hHHHH-HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCC
Q 009673          347 ------------GL--------QGGP-HNHTI-GGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSD  403 (529)
Q Consensus       347 ------------~~--------~g~p-~~~~i-aala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~  403 (529)
                                  +.        .|-. ....+ +++  .+...  ..++++.++..++++++.+.|.+. |+.+..+...
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~--~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~  297 (418)
T 2c81_A          222 VYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAI--LLDQL--QELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQ  297 (418)
T ss_dssp             EECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHH--HHHHH--TTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTT
T ss_pred             cccccccccccchhhccccccccCcCCCcCHHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCC
Confidence                        00        0000 00111 222  12222  245677788888899999999875 8887632111


Q ss_pred             ----C-ceEEEccCC---CCCcHHHHHHhHhcC-CeE---EcCCCCCCCCC-CC-----------------------C--
Q 009673          404 ----N-HLVLVDLRP---MGIDGARVEKILDMA-SIT---LNKNSVPGDKS-AL-----------------------V--  445 (529)
Q Consensus       404 ----~-~~~~v~~~~---~~i~~~~~~~~L~~~-GI~---v~~~~~Pg~~~-~~-----------------------~--  445 (529)
                          . +++.+.+..   .+++.+++.+.|.+. ||.   ++..+.|.+.. .+                       .  
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (418)
T 2c81_A          298 VSRQTYYGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPV  377 (418)
T ss_dssp             EEECCCSEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHH
T ss_pred             CcccccEEEEEEEccccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChH
Confidence                2 233355532   256778888888777 999   87655442210 00                       0  


Q ss_pred             -----CCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          446 -----PGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       446 -----~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                           .+.|||+++..+   -+++|++++++.|++++.
T Consensus       378 ~~~~~~~~lrl~~~~~~---gt~edi~~~~~~l~~~~~  412 (418)
T 2c81_A          378 SERASGQSIVIHHAILL---AEPSHLSLLVDAVAELAR  412 (418)
T ss_dssp             HHHHHHHEEEEEGGGGG---SCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCEEEecCCccC---CCHHHHHHHHHHHHHHHH
Confidence                 147999976543   058999999999998875

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=99.92  E-value=1.3e-23  Score=220.97  Aligned_cols=339  Identities=14%  Similarity=0.087  Sum_probs=217.1

Q ss_pred             cceeEecCCCC-CcHHHHHHHhhhhhcc--------C--CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC----CCCCC
Q 009673          103 KSLELIASENF-TSRAVMEAVGSCLTNK--------Y--SEGLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENK  167 (529)
Q Consensus       103 ~~i~L~asen~-~~~~V~eal~~~l~~~--------y--~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g----~~~~~  167 (529)
                      ..|+|..++|+ .++.+.+++.......        .  ...|+.      .....++++.+.+++.+.+|    ++++ 
T Consensus        37 ~~i~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~g~~~lr~~la~~~~~~~g~~~~~~~~-  109 (428)
T 1iay_A           37 GVIQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQD------YHGLPEFRKAIAKFMEKTRGGRVRFDPE-  109 (428)
T ss_dssp             SBEECSSCCCCSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCC------TTCCHHHHHHHHHHHHHHTTTCSCCCTT-
T ss_pred             ceeeeccccchhhHHHHHHHHHhccccccccccccccHhhcCCCC------CCCcHHHHHHHHHHHHHhcCCCCCCChh-
Confidence            34778777876 4567777776432100        0  011222      11134666666677777777    4444 


Q ss_pred             CceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHH
Q 009673          168 WGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEK  245 (529)
Q Consensus       168 ~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~  245 (529)
                         +|.+++|+ +++..++.++++|||+|++++|.|.++.. .      .....|.  ++++++++.+ ++.+|++++++
T Consensus       110 ---~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~-~------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~  177 (428)
T 1iay_A          110 ---RVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNR-D------LRWRTGV--QLIPIHCESSNNFKITSKAVKE  177 (428)
T ss_dssp             ---SCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHH-H------TTTTTCC--EEEEECCCTTTTTCCCHHHHHH
T ss_pred             ---hEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHH-H------HHHhcCC--EEEEeecCCccCCcCCHHHHHH
Confidence               34557776 89999999999999999999998865421 0      1123454  6667766543 45789999999


Q ss_pred             Hhhhc-----CCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC----Cc-------
Q 009673          246 TAILF-----RPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF----KY-------  304 (529)
Q Consensus       246 ~i~~~-----~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~----~~-------  304 (529)
                      .+++.     ++++|+++.++||+  ..+   +++|.++|+++|++||+|++|..+ ...+....++    ..       
T Consensus       178 ~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~-~~~~~~~~~~~~~~~~~~~~~~~  256 (428)
T 1iay_A          178 AYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAAT-VFDTPQFVSIAEILDEQEMTYCN  256 (428)
T ss_dssp             HHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGG-CCSSSCCCCHHHHHTSGGGTTSC
T ss_pred             HHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEecccccc-ccCCCCccCHHHhccccccccCC
Confidence            88752     68888888888876  667   899999999999999999997643 2222111111    12       


Q ss_pred             cc--EEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh--cCchHHHHHHH
Q 009673          305 CD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA--QSPEFKVYQNK  378 (529)
Q Consensus       305 aD--iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~--~~~~~~~~~~~  378 (529)
                      .|  +++.|+||++  +|.|.|+++++++     ++.+.+.....++  +. +....+++..+++..  ....+++..++
T Consensus       257 ~d~viv~~s~sK~~g~~Glr~G~~~~~~~-----~~~~~~~~~~~~~--~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~  328 (428)
T 1iay_A          257 KDLVHIVYSLSKDMGLPGFRVGIIYSFND-----DVVNCARKMSSFG--LV-STQTQYFLAAMLSDEKFVDNFLRESAMR  328 (428)
T ss_dssp             TTSEEEEEESTTTSSCGGGCEEEEEESCH-----HHHHHHHHHHTTS--CC-CHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             CCcEEEEecchhhcCCCCceEEEEEeCCH-----HHHHHHHHHHhcc--cC-CHHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence            57  8899999998  6788899998542     5666665432221  22 233333333334321  01123567788


Q ss_pred             HHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCC-----CcHHHHHHhHh-cCCeEEcCCCCCCCCCCCCCCeEEEc
Q 009673          379 VVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMG-----IDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIG  452 (529)
Q Consensus       379 i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~-----i~~~~~~~~L~-~~GI~v~~~~~Pg~~~~~~~~~iRig  452 (529)
                      +.++++.+.+.|.+.|+++..+ ..+.++++++....     .+..++.+.|. ++||.+..+...+   ...++++||+
T Consensus       329 ~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~---~~~~~~iRis  404 (428)
T 1iay_A          329 LGKRHKHFTNGLEVVGIKCLKN-NAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFE---CQEPGWFRVC  404 (428)
T ss_dssp             HHHHHHHHHHHHHHTTCCBCCC-SSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGT---CSSSSEEEEE
T ss_pred             HHHHHHHHHHHHHhcCCcccCC-CeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhC---CCCCCEEEEE
Confidence            8889999999998888876543 23456777774311     12345666665 4699986542211   1125689999


Q ss_pred             cCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          453 SPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       453 ~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +..     .++++++++++.|+++++
T Consensus       405 ~~~-----~~~e~i~~~~~~l~~~l~  425 (428)
T 1iay_A          405 FAN-----MDDGTVDIALARIRRFVG  425 (428)
T ss_dssp             CSS-----SCHHHHHHHHHHHHHHHH
T ss_pred             Eec-----CCHHHHHHHHHHHHHHHh
Confidence            752     458999999999998875

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=99.92  E-value=1.1e-23  Score=217.10  Aligned_cols=325  Identities=13%  Similarity=0.041  Sum_probs=216.2

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCCh-
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG-  177 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V~~~sG-  177 (529)
                      +.|+|..+++.  +|+.|++++...+..  ..+|+.      .....++++...+++.+.+|+  +++    +|.+++| 
T Consensus        24 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~------~~g~~~lr~~la~~l~~~~g~~~~~~----~i~~t~g~   91 (376)
T 3ezs_A           24 RGLDLGIGEPQFETPKFIQDALKNHTHS--LNIYPK------SAFEESLRAAQRGFFKRRFKIELKEN----ELISTLGS   91 (376)
T ss_dssp             CCCBCSSCCCCSCCCHHHHHHHHTTGGG--GGSCCC------TTCCHHHHHHHHHHHHHHHSCCCCGG----GEEEESSS
T ss_pred             CEEEeCCCCCCCCCCHHHHHHHHHhhhh--cCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCHH----HEEECcCc
Confidence            45778777763  579999999877622  123332      111245666666888888898  443    3444555 


Q ss_pred             HHHHHHHHHhhcCC--CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673          178 SPANFEVYTAILKP--HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI  255 (529)
Q Consensus       178 s~A~~~~l~all~p--GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI  255 (529)
                      ++|+..++.++++|  ||+|++.+|.|.++..        .+...|.  +++.+++++++ .+++ ++++.+.+ ++++|
T Consensus        92 ~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~-~~~~-~l~~~~~~-~~~~v  158 (376)
T 3ezs_A           92 REVLFNFPSFVLFDYQNPTIAYPNPFYQIYEG--------AAKFIKA--KSLLMPLTKEN-DFTP-SLNEKELQ-EVDLV  158 (376)
T ss_dssp             HHHHHHHHHHHTTTCSSCEEEEEESCCTHHHH--------HHHHTTC--EEEEEECCGGG-TSCC-CCCHHHHH-HCSEE
T ss_pred             HHHHHHHHHHHcCCCCCCEEEEecCCcHhHHH--------HHHHcCC--EEEEcccCCCC-Ccch-hHHhhhcc-CCCEE
Confidence            59999999999999  9999999988765421        2334454  66666665432 3344 66667766 79999


Q ss_pred             EEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC----------CCcccEEEecccccc--cC
Q 009673          256 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP----------FKYCDVVTTTTHKSL--RG  318 (529)
Q Consensus       256 i~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~----------~~~aDiv~~S~hK~l--~G  318 (529)
                      +++.++||+  ..+   +++|.++|++||+++|+|++|.. +...+.....          ....++++.|+||++  +|
T Consensus       159 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G  237 (376)
T 3ezs_A          159 ILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSE-IYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPG  237 (376)
T ss_dssp             EECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGG
T ss_pred             EEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchh-hccCCCCCCHHHccccccccccCcEEEEecchhccCCcc
Confidence            998888886  444   67788889999999999999654 3332211111          113568999999997  67


Q ss_pred             CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEe
Q 009673          319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV  398 (529)
Q Consensus       319 prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~  398 (529)
                      .|.|++++++      ++.+.+........ .+++....+++..+++.  ...+++..+++.++++.+.+.|+  |+.  
T Consensus       238 ~r~G~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~--~~~--  304 (376)
T 3ezs_A          238 LRSGFIAGDS------RLLEKYKAFRAYLG-YTSANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK--NTL--  304 (376)
T ss_dssp             GCCEEEEECH------HHHHHHHHHHTTTC-CCCCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST--TCC--
T ss_pred             ceeEEEeeCH------HHHHHHHHHHhhhc-CCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc--CCC--
Confidence            8889999877      67776654332222 23344445554555653  23457777888888888888886  665  


Q ss_pred             cCCCCCceEEEccCCCCCcHHHHHHhHhc-CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          399 SGGSDNHLVLVDLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       399 ~~gt~~~~~~v~~~~~~i~~~~~~~~L~~-~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      .+ ..++++++++.    +..++.+.|.+ +||.+..+..++. ....++++||++..      +++|++++++.|++++
T Consensus       305 ~~-~~~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~~~~-~~~~~~~iRis~~~------~~~~i~~~l~~l~~~l  372 (376)
T 3ezs_A          305 IY-PYSFYVYLPVQ----NGENFAKTLYQNEGIITLPALYLGR-NRIGADYVRLALVY------DTPLLEKPLEIIETYR  372 (376)
T ss_dssp             CC-SBSSEEEEECS----CHHHHHHHHHHHHCCBCEEGGGGCS-TTTTTTEEEEECCS------CHHHHHHHHHHHHHHH
T ss_pred             CC-CcceEEEEECC----CHHHHHHHHHHhCCEEEeCcHHhCC-CCCCCCeEEEEEcC------CHHHHHHHHHHHHHHH
Confidence            22 23456777775    46677666765 8999865433221 12346899999652      5899999999998876


Q ss_pred             H
Q 009673          478 E  478 (529)
Q Consensus       478 ~  478 (529)
                      +
T Consensus       373 ~  373 (376)
T 3ezs_A          373 E  373 (376)
T ss_dssp             C
T ss_pred             H
Confidence            4

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.92  E-value=4.6e-23  Score=220.26  Aligned_cols=327  Identities=16%  Similarity=0.133  Sum_probs=214.6

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh----c
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----L  189 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al----l  189 (529)
                      ..|.+.+++...++ .|+. |....   ..+...+++..+++++++++|++.    ..+.+++|++|+..++.++    .
T Consensus        78 ~~p~v~~~~~~~~~-~~~~-~~~~~---~~~g~~~l~~~l~~~la~~~g~~~----~~~~~~ggt~a~~~al~~~~~~~~  148 (474)
T 1wyu_B           78 YNPKLHEEAARLFA-DLHP-YQDPR---TAQGALRLMWELGEYLKALTGMDA----ITLEPAAGAHGELTGILIIRAYHE  148 (474)
T ss_dssp             CCCHHHHHHHHTTS-SCCT-TSCGG---GCHHHHHHHHHHHHHHHHHHTCSE----EECCCSSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHH-hcCC-CCchh---hChHHHHHHHHHHHHHHHHHCCCc----eeecChHHHHHHHHHHHHHHHHHH
Confidence            34667777765432 2311 11100   022234556667799999999975    2345577779988766554    4


Q ss_pred             CCCC-----EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC
Q 009673          190 KPHD-----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR  264 (529)
Q Consensus       190 ~pGD-----~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~  264 (529)
                      ++||     +|+++++.|+.+..        .+...|.  +++.++++ +++.+|+++|++++++ ++++|+++++|+.+
T Consensus       149 ~~Gd~~~r~~Vlv~~~~h~~~~~--------~~~~~G~--~vv~v~~~-~~~~~d~~~L~~~i~~-~t~~v~~~~pn~~G  216 (474)
T 1wyu_B          149 DRGEGRTRRVVLVPDSAHGSNPA--------TASMAGY--QVREIPSG-PEGEVDLEALKRELGP-HVAALMLTNPNTLG  216 (474)
T ss_dssp             HTTCTTTCCEEEEETTSCTHHHH--------HHHHTTC--EEEEECBC-TTSSBCHHHHHHHCST-TEEEEEECSSCTTS
T ss_pred             hcCCccCCCEEEEeCCcChhhHH--------HHHHCCC--EEEEecCC-CCCCcCHHHHHHhhCC-CceEEEEECCCCCc
Confidence            6898     99999987765431        2344564  67777776 4689999999999987 78999998776433


Q ss_pred             -C-CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccccCC------CCeEEEeeCCCcchhH
Q 009673          265 -D-FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGP------RGGMIFFKKDPVLGVE  335 (529)
Q Consensus       265 -~-~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~Gp------rgG~i~~~~~~~~~~~  335 (529)
                       . .++++|+++|++||+++|+|++|..+..  +.. .+.. ++|++++|+||+|.+|      +.|++++++      +
T Consensus       217 ~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~--g~~-~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~------~  287 (474)
T 1wyu_B          217 LFERRILEISRLCKEAGVQLYYDGANLNAIM--GWA-RPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKA------H  287 (474)
T ss_dssp             CCCTTHHHHHHHHHHHTCEEEEEGGGGGGTT--TTC-CHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECG------G
T ss_pred             ccCCCHHHHHHHHHHcCCEEEEeCchhhhhc--cCC-CcccCCCcEEEEeCccccccCCCCCCCCeEEEEEcH------H
Confidence             4 5899999999999999999999865543  111 1111 5899999999998644      679999988      4


Q ss_pred             HHhhhcccc-------c------C-----CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEE
Q 009673          336 LESAINNAV-------F------P-----GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL  397 (529)
Q Consensus       336 l~~~i~~~~-------~------p-----~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v  397 (529)
                      +.+.+....       +      +     ...++++...+++....+.....+++++..+++.++++++.+.|++.|+++
T Consensus       288 l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~g~~~  367 (474)
T 1wyu_B          288 LAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKGYRV  367 (474)
T ss_dssp             GGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred             HHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcEe
Confidence            555443100       0      0     011122332233222334433234567778889999999999998888887


Q ss_pred             ecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          398 VSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       398 ~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      ..++...+.+++++ +.+.+..++.+.|.+.||.+.....|    ....+.+||++...    .+++|++++++.|++++
T Consensus       368 ~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~Gi~~~~~~~~----~~~~~~lRis~~~~----~t~e~id~~~~~L~~~~  438 (474)
T 1wyu_B          368 PYDGPSMHEFVAQP-PEGFRALDLAKGLLELGFHPPTVYFP----LIVKEALMVEPTET----EAKETLEAFAEAMGALL  438 (474)
T ss_dssp             SSCSSCCSCEEEBC-STTCCHHHHHHHHHHTTCCCCEESCS----TTSTTCEEECCCTT----SCHHHHHHHHHHHHHHH
T ss_pred             cCCCCcceEEEEEc-CCCCCHHHHHHHHHHCCccccccccc----cccCCEEEEEeecC----CCHHHHHHHHHHHHHHH
Confidence            44332223356676 34567778888887889975221111    11357899997643    35899999999998887


Q ss_pred             HH
Q 009673          478 EI  479 (529)
Q Consensus       478 ~~  479 (529)
                      ..
T Consensus       439 ~~  440 (474)
T 1wyu_B          439 KK  440 (474)
T ss_dssp             TS
T ss_pred             Hh
Confidence            54

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=99.92  E-value=1.5e-23  Score=219.48  Aligned_cols=341  Identities=15%  Similarity=0.112  Sum_probs=219.0

Q ss_pred             cceeEecCC------CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc------C--CCCCCC
Q 009673          103 KSLELIASE------NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF------N--LDENKW  168 (529)
Q Consensus       103 ~~i~L~ase------n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~------g--~~~~~~  168 (529)
                      +.|+|..+.      .++++.+++++...+.+....+|+.      .....++++...+++.+.|      |  ++++  
T Consensus        34 ~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~--  105 (416)
T 1bw0_A           34 PIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFP------TVGSPEAREAVATWWRNSFVHKEELKSTIVKD--  105 (416)
T ss_dssp             CCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCC------TTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGG--
T ss_pred             CeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCC------CCCCHHHHHHHHHHHHhhhcccccCCCCCCcc--
Confidence            457776654      2468999999988775432223322      1122455544445554222      2  3333  


Q ss_pred             ceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHH
Q 009673          169 GVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKT  246 (529)
Q Consensus       169 ~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~  246 (529)
                        +|.+++|+ +|+..++.++++|||+|++++|.|.++..        .+...|.  +++.++++++ ++.+|+++|++.
T Consensus       106 --~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~  173 (416)
T 1bw0_A          106 --NVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYET--------VCKAYGI--GMHFYNCRPENDWEADLDEIRRL  173 (416)
T ss_dssp             --GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTC--EEEEEEEEGGGTTEECHHHHHHH
T ss_pred             --eEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHH--------HHHHcCc--EEEEeecCcccCCCCCHHHHHHH
Confidence              45556665 89999999999999999999998765421        2334454  5566666543 467999999999


Q ss_pred             hhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccc----cCCCC---C--cccEEEecc
Q 009673          247 AILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV----VADPF---K--YCDVVTTTT  312 (529)
Q Consensus       247 i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~----~~~~~---~--~aDiv~~S~  312 (529)
                      +++ ++++|+++.++||+  ..+   +++|.++|++||++||+|++|.. +...+.    ...++   .  ..+++++|+
T Consensus       174 l~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~  251 (416)
T 1bw0_A          174 KDD-KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAG-MVFKGKDPNATFTSVADFETTVPRVILGGT  251 (416)
T ss_dssp             CCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTT-CBCCSSCTTCCCCCTTSSCCSCCEEEEEES
T ss_pred             hcc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCCCCccCHHHccCCCcEEEEecc
Confidence            987 78888888888886  566   89999999999999999999654 443332    11122   1  124788999


Q ss_pred             cccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 009673          313 HKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL  390 (529)
Q Consensus       313 hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L  390 (529)
                      ||++  +|+|.|+++++++......+...+.....  ...+++....+++..+|+......+++..+++.++++.+.+.|
T Consensus       252 sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L  329 (416)
T 1bw0_A          252 AKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGM--LVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHI  329 (416)
T ss_dssp             TTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHH--HHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHhc--cccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence            9986  67889999998730000112222221100  0123344455555556663322345778888999999999999


Q ss_pred             Hhc-CcEEecCCCCCceEEEccCC----CCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHH
Q 009673          391 VEL-GYKLVSGGSDNHLVLVDLRP----MGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK  464 (529)
Q Consensus       391 ~~~-G~~v~~~gt~~~~~~v~~~~----~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~  464 (529)
                      ++. |+.++.+. ...++++.+..    ...+..++.+.| +++||.+..+...+     .++++||++.      .+++
T Consensus       330 ~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~-----~~~~iRis~~------~~~e  397 (416)
T 1bw0_A          330 GECIGLAPTMPR-GAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFH-----APGFTRLTTT------RPVE  397 (416)
T ss_dssp             TTSTTEEECCCC-BTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGT-----CTTEEEEECC------SCHH
T ss_pred             HhCCCCcccCCC-eeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccC-----CCCeEEEEec------CCHH
Confidence            885 88876442 24556665532    123566665555 78999986432221     2578999973      3588


Q ss_pred             HHHHHHHHHHHHHHH
Q 009673          465 EFVAIADFIHEGVEI  479 (529)
Q Consensus       465 d~~~la~~i~~~~~~  479 (529)
                      ++++.++.|.++++.
T Consensus       398 ~l~~~l~~l~~~l~~  412 (416)
T 1bw0_A          398 VYREAVERIKAFCQR  412 (416)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999888764

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.92  E-value=1.5e-23  Score=220.44  Aligned_cols=339  Identities=17%  Similarity=0.077  Sum_probs=222.0

Q ss_pred             cceeEecCCC----CCcHHHHHHHhhhhhccC--CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC---CCCCCceeee
Q 009673          103 KSLELIASEN----FTSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNL---DENKWGVNVQ  173 (529)
Q Consensus       103 ~~i~L~asen----~~~~~V~eal~~~l~~~y--~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~---~~~~~~~~V~  173 (529)
                      +.|+|..+..    ++++.+.+++...+....  ..+|+.      .....++++...+++.+.+|.   +++    +|.
T Consensus        44 ~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~------~~g~~~lr~~la~~l~~~~g~~~~~~~----~v~  113 (425)
T 1vp4_A           44 DAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYST------TEGDPVLKQQILKLLERMYGITGLDED----NLI  113 (425)
T ss_dssp             TCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCC------TTCCHHHHHHHHHHHHHHHCCCSCCGG----GEE
T ss_pred             CceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCC------CCCCHHHHHHHHHHHHhccCCCCCCcc----cEE
Confidence            5678765542    257889999887775321  112322      112346666666777777684   443    455


Q ss_pred             cCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---
Q 009673          174 PLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---  249 (529)
Q Consensus       174 ~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~---  249 (529)
                      +++|+ +|+..++.++++|||+|++.+|.|.++.        ..+...|.  +++.+++++ + .+|+++|++.+++   
T Consensus       114 ~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~--------~~~~~~g~--~~~~v~~~~-~-~~d~~~l~~~l~~~~~  181 (425)
T 1vp4_A          114 FTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAI--------NAFRQYLA--NFVVVPLED-D-GMDLNVLERKLSEFDK  181 (425)
T ss_dssp             EEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH--------HHHHTTTC--EEEEEEEET-T-EECHHHHHHHHHHHHH
T ss_pred             EeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHH--------HHHHHcCC--EEEEeccCC-C-CCCHHHHHHHHHhhhh
Confidence            67776 8999999999999999999998775542        12334554  566666664 3 3999999999875   


Q ss_pred             ----cCCcEE-EEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---C--cccEEEecccc
Q 009673          250 ----FRPKLI-IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTHK  314 (529)
Q Consensus       250 ----~~pklI-i~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~--~aDiv~~S~hK  314 (529)
                          .++++| +++.++||+  ..+   +++|.++|+++|+++|+|++|..+ ...+....++   .  ..+++++|+||
T Consensus       182 ~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~-~~~g~~~~~~~~~~~~~~~i~~~s~sK  260 (425)
T 1vp4_A          182 NGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGAL-RYEGETVDPIFKIGGPERVVLLNTFSK  260 (425)
T ss_dssp             TTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTC-BCSSCCCCCHHHHHCTTTEEEEEESTT
T ss_pred             cccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccc-cCCCCCCcCHHHhCCCCCEEEEecccc
Confidence                368888 467788886  444   678999999999999999997543 3222211122   1  24688999999


Q ss_pred             ccc-CCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHHHh
Q 009673          315 SLR-GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-SPEFKVYQNKVVSNCRALASRLVE  392 (529)
Q Consensus       315 ~l~-GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-~~~~~~~~~~i~~~a~~l~~~L~~  392 (529)
                      +++ |.|.|++++++      ++.+.+.....+...+. +....+++..+|+... ....++..+++.++++.+.+.|++
T Consensus       261 ~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~  333 (425)
T 1vp4_A          261 VLAPGLRIGMVAGSK------EFIRKIVQAKQSADLCS-PAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEE  333 (425)
T ss_dssp             TTCGGGCEEEEECCH------HHHHHHHHHHHHHHSSC-CHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccceEEEeeCH------HHHHHHHHHhhhhcCCC-CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            984 67789999987      67666654322211223 3334444445665421 122366777788899999999987


Q ss_pred             c-----CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673          393 L-----GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV  467 (529)
Q Consensus       393 ~-----G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~  467 (529)
                      .     |+.+..+. ..+++++++.. +.+..++.+.|.+.||.+..+...+. .+..++++||++...     +++|++
T Consensus       334 ~~~~~~g~~~~~~~-~g~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~g~~f~~-~~~~~~~iRis~~~~-----~~e~i~  405 (425)
T 1vp4_A          334 YFSDIPGVKWVKSE-GGLFIWLTLPE-GFDTWEMFEYAKRKKVFYVPGRVFKV-YDEPSPSMRLSFCLP-----PDEKIV  405 (425)
T ss_dssp             HSTTSTTCEECCCS-BSSEEEEECCT-TCCTTTTHHHHHHHTEECEEGGGGCT-TCCCCSEEEEECSSS-----CHHHHH
T ss_pred             hCCCCCceEEecCC-ccEEEEEEcCC-CCCHHHHHHHHHHCCCEEECchhhcC-CCCCCCeEEEEeCCC-----CHHHHH
Confidence            4     68876442 34567777753 44556666667667999865432111 112357899997542     589999


Q ss_pred             HHHHHHHHHHHH
Q 009673          468 AIADFIHEGVEI  479 (529)
Q Consensus       468 ~la~~i~~~~~~  479 (529)
                      ++++.|.+++..
T Consensus       406 ~~l~~l~~~l~~  417 (425)
T 1vp4_A          406 EGIKRLREVVLE  417 (425)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999998864

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=99.92  E-value=1.5e-23  Score=221.46  Aligned_cols=351  Identities=12%  Similarity=-0.007  Sum_probs=215.2

Q ss_pred             hcce-eEecCCCCCcHHHHHHHhhhhhccCC---------------CCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC
Q 009673          102 FKSL-ELIASENFTSRAVMEAVGSCLTNKYS---------------EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE  165 (529)
Q Consensus       102 ~~~i-~L~asen~~~~~V~eal~~~l~~~y~---------------~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~  165 (529)
                      .+.| +|..+.+..++.+.+++...+...+.               .+|+.      .....++++...+++.+.+|...
T Consensus        31 ~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~------~~g~~~lr~~ia~~l~~~~g~~~  104 (444)
T 3if2_A           31 DQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSN------PQGDSAFIDALVGFFNRHYDWNL  104 (444)
T ss_dssp             SSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCC------TTCCHHHHHHHHHHHHHHHCCCC
T ss_pred             chhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCC------CCCCHHHHHHHHHHHHhhcCCCC
Confidence            4678 88777665565554444433322111               12322      22235667666677777777643


Q ss_pred             CCCceeeecCChH-HHHHHHHHhhcCCCC--------------EEEEc-CCCCCccccccccccccccccccceEEEEEc
Q 009673          166 NKWGVNVQPLSGS-PANFEVYTAILKPHD--------------RIMGL-DLPHGGHLSHGFMTPKRRVSGTSIYFESMPY  229 (529)
Q Consensus       166 ~~~~~~V~~~sGs-~A~~~~l~all~pGD--------------~Vl~~-~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~  229 (529)
                      +.  .+|.+++|+ +|+..++.++++|||              +|+++ +|.|.++......  ..  .+.+....++++
T Consensus       105 ~~--~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~--~~--~~~~~~~~~~~~  178 (444)
T 3if2_A          105 TS--ENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVE--GQ--HFAAVLPHIDEV  178 (444)
T ss_dssp             CG--GGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSS--SC--CEEECCCEEEEE
T ss_pred             CH--HHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccc--cc--hhhccCceEEec
Confidence            21  244556665 999999999999998              78876 7777665321100  00  122223466666


Q ss_pred             ccCCC----CCCCCHHHHHHH---hhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccc---c
Q 009673          230 RLDES----TGLVDYDMLEKT---AILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLV---A  294 (529)
Q Consensus       230 ~v~~~----~~~iD~d~le~~---i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli---~  294 (529)
                      +++++    ++.+|+++|+++   +.+ ++++|+++.++||+  ..+   +++|.++|++||++||+|++|.....   .
T Consensus       179 ~~~~~~g~~~~~~d~~~l~~~l~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~  257 (444)
T 3if2_A          179 THDGEEGFFKYRVDFEALENLPALKEG-RIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIY  257 (444)
T ss_dssp             EETTEEEEEEEECCHHHHHTCHHHHTT-CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBC
T ss_pred             ccccccCccccCCCHHHHHHHHHhcCC-CceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccccccc
Confidence            66642    247999999988   455 78999998888886  566   88899999999999999999754221   1


Q ss_pred             ccccCCCCCcccEEEecccccc-cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcC-chH
Q 009673          295 ASVVADPFKYCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS-PEF  372 (529)
Q Consensus       295 ~~~~~~~~~~aDiv~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~-~~~  372 (529)
                      .+..+ .....+++++|+||++ +|.|.||++.++      ++.+.+.........+++...+.+ +...++.... ...
T Consensus       258 ~~~~~-~~~~~~i~~~S~sK~~~~G~r~G~~~~~~------~l~~~~~~~~~~~~~~~~~~~~~a-~~~~l~~~~~~~~~  329 (444)
T 3if2_A          258 SDAHL-NWDNNTILCFSLSKIGLPGMRTGIIVADA------KVIEAVSAMNAVVNLAPTRFGAAI-ATPLVANDRIKQLS  329 (444)
T ss_dssp             SCCCC-CCCTTEEEEEESTTTTCGGGCCEEEECCH------HHHHHHHHHHHHHHSSCCCHHHHH-HHHHHHTSHHHHHH
T ss_pred             ccccc-cCCCCEEEEechhhccCCCCceEEEEECH------HHHHHHHHHHHhccCCCChHHHHH-HHHHHHcCchhHHH
Confidence            11111 1124679999999974 678889999887      676665443221111222222222 2223332100 011


Q ss_pred             HH-HHHHHHHHHHHHHHHHHhc----CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCC--CCCC---
Q 009673          373 KV-YQNKVVSNCRALASRLVEL----GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVP--GDKS---  442 (529)
Q Consensus       373 ~~-~~~~i~~~a~~l~~~L~~~----G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~P--g~~~---  442 (529)
                      .+ ..+.+.++++.+.+.|.+.    ++.+..+. ...++|+++...+++..++.+.|.++||.+..+...  +...   
T Consensus       330 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~  408 (444)
T 3if2_A          330 DNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPE-GAIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDY  408 (444)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCC-BSSEEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCCceEecCC-ccEEEEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCccc
Confidence            12 4456677777888887662    55655432 345677777644567888888899999999654322  1110   


Q ss_pred             CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          443 ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       443 ~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      +...++|||++..      ++++++++++.|.+++...
T Consensus       409 ~~~~~~iRis~~~------~~e~i~~~l~~l~~~~~~~  440 (444)
T 3if2_A          409 QHAHECIRMSIAA------DEQTLIDGIKVIGEVVREL  440 (444)
T ss_dssp             SGGGSEEEEESSS------CHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCeEEEEEeC------CHHHHHHHHHHHHHHHHHH
Confidence            1123689999763      5899999999999988643

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.92  E-value=4.8e-23  Score=214.60  Aligned_cols=324  Identities=14%  Similarity=0.097  Sum_probs=212.0

Q ss_pred             CCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-c
Q 009673          111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-L  189 (529)
Q Consensus       111 en~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l  189 (529)
                      ...+++++++++...+.+.|..   .    .| +...+++    +.+++++|.+.     .+...+|++|+..++.++ +
T Consensus         7 ~p~~~~~v~~a~~~~~~~~~~~---~----~g-~~~~~l~----~~la~~~~~~~-----v~~~~ggt~al~~~~~~l~~   69 (394)
T 1o69_A            7 PPHMGGNELKYIEEVFKSNYIA---P----LG-EFVNRFE----QSVKDYSKSEN-----ALALNSATAALHLALRVAGV   69 (394)
T ss_dssp             -----CCHHHHHHHHHHHTTTS---C----TT-HHHHHHH----HHHHHHHCCSE-----EEEESCHHHHHHHHHHHTTC
T ss_pred             CCCCCHHHHHHHHHHHHcCCcc---C----CC-hHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHcCC
Confidence            4456788899988877654421   0    12 3344554    67888888742     244566779999999999 9


Q ss_pred             CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCCCCC
Q 009673          190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYPRDFD  267 (529)
Q Consensus       190 ~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~p~~~d  267 (529)
                      +|||+|+++++.|.+...        .+...|.  +++.++++ +++.+|+++|++.+++.  ++++|+++++ .+...+
T Consensus        70 ~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~~~v~~~~~-~G~~~~  137 (394)
T 1o69_A           70 KQDDIVLASSFTFIASVA--------PICYLKA--KPVFIDCD-ETYNIDVDLLKLAIKECEKKPKALILTHL-YGNAAK  137 (394)
T ss_dssp             CTTCEEEEESSSCGGGTH--------HHHHTTC--EEEEECBC-TTSSBCHHHHHHHHHHCSSCCCEEEEECG-GGCCCC
T ss_pred             CCCCEEEECCCccHHHHH--------HHHHcCC--EEEEEEeC-CCCCcCHHHHHHHHhcccCCceEEEEECC-CCChhh
Confidence            999999999998866532        2334554  67777776 57889999999999764  6899888752 344789


Q ss_pred             HHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcccccCC
Q 009673          268 YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG  347 (529)
Q Consensus       268 ~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~  347 (529)
                      +++|.++|+++|++||+|++|..|..+.+.....+..+|+.++|.||.++|+++|+++++++     ++.+.+......+
T Consensus       138 l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~~G~~~~~~~-----~l~~~l~~~~~~~  212 (394)
T 1o69_A          138 MDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKNK-----EKIEKARFYSTQA  212 (394)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCH-----HHHHHHHHHTBTC
T ss_pred             HHHHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCCCceEEEECCH-----HHHHHHHHHHHhc
Confidence            99999999999999999999887776544322122357888888899998888999999642     5555543321111


Q ss_pred             ------CC--------CCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC---CC-ceEEE
Q 009673          348 ------LQ--------GGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS---DN-HLVLV  409 (529)
Q Consensus       348 ------~~--------g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt---~~-~~~~v  409 (529)
                            .+        +++.....++    +...  ..+++..+++.++++++.+.|.+. +.+..+..   .+ +++++
T Consensus       213 ~~~~~~~~~~~~g~~~~~~~~~aa~~----l~~l--~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i  285 (394)
T 1o69_A          213 RENCLHYEHLDYGYNYRLSNVLGAIG----VAQM--EVLEQRVLKKREIYEWYKEFLGEY-FSFLDELENSRSNRWLSTA  285 (394)
T ss_dssp             CCSSSSCCCSSCCCBCBCCHHHHHHH----HHHH--TTHHHHHHHHHHHHHHHHHHHTTT-EECCCCCTTEECCCSSEEE
T ss_pred             cccCccccccccCcccCcCHHHHHHH----HHHH--HHHHHHHHHHHHHHHHHHHHhccc-ccccCCCCCCcceeEEEEE
Confidence                  11        1222322222    2221  235667888899999999999877 66554311   12 23555


Q ss_pred             ccCCC--------------------CCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCC--------------CeEEEccC
Q 009673          410 DLRPM--------------------GIDGARVEKILDMASITLNKNSVPGDK-SALVP--------------GGIRIGSP  454 (529)
Q Consensus       410 ~~~~~--------------------~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~--------------~~iRig~~  454 (529)
                      .+...                    +++.+++.+.|.+.||.++.++.|.+. +.+..              .++|+...
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (394)
T 1o69_A          286 LINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSG  365 (394)
T ss_dssp             EESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCC
T ss_pred             EecchhhccccccccccccccccccccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCC
Confidence            55421                    235677888898999999765433111 11111              34555443


Q ss_pred             CCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          455 AMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       455 ~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                          ..++++|++++++.|++++..
T Consensus       366 ----~~~t~edi~~~~~~l~~~~~~  386 (394)
T 1o69_A          366 ----TAMSKDDVYEISKLILKSIKA  386 (394)
T ss_dssp             ----TTCCHHHHHHHHHHHHHHHC-
T ss_pred             ----CCCCHHHHHHHHHHHHHHHhc
Confidence                236699999999999887653

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.92  E-value=1.4e-23  Score=233.66  Aligned_cols=301  Identities=14%  Similarity=0.123  Sum_probs=209.2

Q ss_pred             HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673          153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL  231 (529)
Q Consensus       153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v  231 (529)
                      +++.++++||++..     +.+++|+ +||.+++.++++|||+|++..+.|.+++. +      .+...|+  +++.++.
T Consensus       178 ~e~~lA~~~gae~~-----i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~-~------~~~l~Ga--~~v~v~~  243 (730)
T 1c4k_A          178 AEKHAARVYNADKT-----YFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYN-S------ALAMAGG--RPVYLQT  243 (730)
T ss_dssp             HHHHHHHHTTCSEE-----EEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHH-H------HTTTTCC--EEEEECE
T ss_pred             HHHHHHHHHCCCcE-----EEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHH-H------HHHHCCC--EEEEEeC
Confidence            44788999999852     4568887 99999999999999999999998765532 1      0334565  5555444


Q ss_pred             CCCC----CCCCHHHH-----HHHhhhcC-----C----cEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEeccccccc
Q 009673          232 DEST----GLVDYDML-----EKTAILFR-----P----KLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGL  292 (529)
Q Consensus       232 ~~~~----~~iD~d~l-----e~~i~~~~-----p----klIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gl  292 (529)
                      +.++    +.+|+++|     ++++++..     +    |+|+++++++.+ ..|+++|+++|+++|++|++|+||+.++
T Consensus       244 ~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn~~G~v~dl~~I~~la~~~g~~livDeAh~~~~  323 (730)
T 1c4k_A          244 NRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYE  323 (730)
T ss_dssp             EECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCCGG
T ss_pred             CccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCCCCCeecCHHHHHHHHHHcCCeEEEEccccccc
Confidence            3222    23688877     88887631     3    888888776544 7899999999999999999999997654


Q ss_pred             cccccc--CCCCC----ccc----EEEecccccccCCCC-eEEEeeCCCcch-hHH--HhhhcccccCCCCCCChHHHHH
Q 009673          293 VAASVV--ADPFK----YCD----VVTTTTHKSLRGPRG-GMIFFKKDPVLG-VEL--ESAINNAVFPGLQGGPHNHTIG  358 (529)
Q Consensus       293 i~~~~~--~~~~~----~aD----iv~~S~hK~l~Gprg-G~i~~~~~~~~~-~~l--~~~i~~~~~p~~~g~p~~~~ia  358 (529)
                      ...+..  ..++.    ++|    ++++|+||+|+|+++ |+++++++.... .++  ..+++........++|+...++
T Consensus       324 ~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~ia  403 (730)
T 1c4k_A          324 QFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYA  403 (730)
T ss_dssp             GSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHH
T ss_pred             ccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHH
Confidence            433211  12221    577    999999999999986 788777641000 000  1122222112234678888999


Q ss_pred             HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cCcEEecCCC----------------------------------
Q 009673          359 GLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGGS----------------------------------  402 (529)
Q Consensus       359 ala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G~~v~~~gt----------------------------------  402 (529)
                      ++.+|++.+..++..++.++..++++.+++.|++  .|+.++.+..                                  
T Consensus       404 al~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  483 (730)
T 1c4k_A          404 ALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEG  483 (730)
T ss_dssp             HHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTT
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhccccc
Confidence            9988888765434577889999999999999988  6888764311                                  


Q ss_pred             --CCc--e----EEEcc----------CCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHH
Q 009673          403 --DNH--L----VLVDL----------RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK  464 (529)
Q Consensus       403 --~~~--~----~~v~~----------~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~  464 (529)
                        +++  +    +++.+          ...++++..+.+.|.++||.+.+.         ....+|+.++.    |.+++
T Consensus       484 ~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~---------~~~~ir~~~s~----g~t~e  550 (730)
T 1c4k_A          484 YGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKS---------DLNSILFLMTP----AETPA  550 (730)
T ss_dssp             CCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEE---------CSSEEEEECCT----TCCHH
T ss_pred             cCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEEC---------CCCeEEEEeCC----CCCHH
Confidence              111  1    34444          233678889999998889988542         24679987654    55689


Q ss_pred             HHHHHHHHHHHHHHHH
Q 009673          465 EFVAIADFIHEGVEIT  480 (529)
Q Consensus       465 d~~~la~~i~~~~~~~  480 (529)
                      |++++++.|.++.+..
T Consensus       551 ~i~~Ll~aL~~i~~~~  566 (730)
T 1c4k_A          551 KMNNLITQLLQLQRLI  566 (730)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            9999999999887644

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.92  E-value=9.3e-24  Score=221.91  Aligned_cols=307  Identities=14%  Similarity=0.096  Sum_probs=204.4

Q ss_pred             ChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhh--ccC--CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC
Q 009673           87 DPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLT--NKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFN  162 (529)
Q Consensus        87 d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~--~~y--~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g  162 (529)
                      ..++++.++++..++...++.++++|.  +.|++|+.....  ..+  ++||..     +....+++|    +++++++|
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~a~~n~--~~Vl~A~~~~~~~~~~~~~~~gy~y-----~~~~~~~Le----~~lA~l~g   87 (427)
T 3i16_A           19 VLKLYETAMNDIQNQFKILDDIREFNQ--LKVLNAFQEERISEAHFTNSSGYGY-----GDIGRDSLD----AVYARVFN   87 (427)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCCCCTTCT-----TCHHHHHHH----HHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCH--HHHHHHHHHhchhHHhcCCCCCCCC-----CHHHHHHHH----HHHHHHhC
Confidence            344566667777777788888888886  779999975421  111  223322     223356666    67899999


Q ss_pred             CCCCCCceeee--cCChHHHHHHHHHhhcCCCCEEEEcC-CCCCcccccc-cccc--ccccccccceEEEEEcccCCCCC
Q 009673          163 LDENKWGVNVQ--PLSGSPANFEVYTAILKPHDRIMGLD-LPHGGHLSHG-FMTP--KRRVSGTSIYFESMPYRLDESTG  236 (529)
Q Consensus       163 ~~~~~~~~~V~--~~sGs~A~~~~l~all~pGD~Vl~~~-~~~~g~~s~g-~~~~--~~~i~~~g~~~~~v~~~v~~~~~  236 (529)
                      .+.    ..|+  ++||++||..++.++++|||+|++.+ +.|+++.... ....  ...+...|.  +++.++++ +++
T Consensus        88 ~e~----alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~--~~~~v~~~-~~g  160 (427)
T 3i16_A           88 TES----ALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGI--NYKQVDLK-EDG  160 (427)
T ss_dssp             CSE----EEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTC--EEEECCCC-TTS
T ss_pred             Ccc----eEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCC--EEEEecCc-cCC
Confidence            986    3343  68999999999999999999999998 7776553100 0000  001222344  67777776 457


Q ss_pred             CCCHHHHHHHhhh-cCCcEEEEcC----CCCCC--CCCHHHHHHHHHH--hCCEEEEecccccccccccccCCCCC-ccc
Q 009673          237 LVDYDMLEKTAIL-FRPKLIIAGA----SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-YCD  306 (529)
Q Consensus       237 ~iD~d~le~~i~~-~~pklIi~~~----s~~p~--~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~~-~aD  306 (529)
                      .+|++++++++++ .++|+|+++.    ++||+  ..|+++|+++|++  +|+++++|++|..+...    ..|.. ++|
T Consensus       161 ~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~----~~p~~~gaD  236 (427)
T 3i16_A          161 KPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDT----KEPTDVGAD  236 (427)
T ss_dssp             SCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSS----SCGGGGTCS
T ss_pred             CcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCcccccc----CCccccCCe
Confidence            8999999999983 3899999987    77775  5689999999999  99999999998765421    23333 689


Q ss_pred             EEEecccccccC---CCCeEEEeeCCCcchhHHHhhhcccc-cCCCC--CCChHHHHHHHHHHHHHhcCchHHHHHHHHH
Q 009673          307 VVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAINNAV-FPGLQ--GGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV  380 (529)
Q Consensus       307 iv~~S~hK~l~G---prgG~i~~~~~~~~~~~l~~~i~~~~-~p~~~--g~p~~~~iaala~al~~~~~~~~~~~~~~i~  380 (529)
                      ++++|+||+++|   ++||++++++      ++.+++.... .+++.  .+|...   +...+++.+  .....++++..
T Consensus       237 iv~~S~sK~lgg~g~~~gG~i~~~~------~li~~l~~~~~~~~~g~~~~~~~~---~a~~~l~gl--~~~~~r~~~~~  305 (427)
T 3i16_A          237 LIAGSLIKNIGGGIAPTGGYLAGTK------DCIEKTSYRLTVPGIGGECGSTFG---VVRSMYQGL--FLAPHISMEAL  305 (427)
T ss_dssp             EEEEETTSGGGTTTCCSCEEEEECH------HHHHHHHHHHSCTTTGGGCCCCTT---CHHHHHHHH--HHHHHHHHHHH
T ss_pred             EEEecCcccCCCCCCceEEEEEECH------HHHHHHHHhcccCccCccCCccHH---HHHHHHHHH--HHHHHHHHHHH
Confidence            999999999977   8899999987      7777765522 22221  122111   011122221  12256788999


Q ss_pred             HHHHHHHHHHHhcCcEEecCCCCCc-----eEEEccCCCCCcHHHHHHhHhcCC
Q 009673          381 SNCRALASRLVELGYKLVSGGSDNH-----LVLVDLRPMGIDGARVEKILDMAS  429 (529)
Q Consensus       381 ~~a~~l~~~L~~~G~~v~~~gt~~~-----~~~v~~~~~~i~~~~~~~~L~~~G  429 (529)
                      +|+.++++.|++.|+++.++  .++     +..+.+... .....+.+.|+...
T Consensus       306 ~~a~~la~~L~~~g~~V~p~--~~~~~~~~i~~i~l~~~-~~~~~f~~~l~~~~  356 (427)
T 3i16_A          306 KGAILCSRIMELAGFEVMPK--YDEKRSDIIQSIKFNDK-DKLIEFCKGIQTGS  356 (427)
T ss_dssp             HHHHHHHHHHHHTTCEEESC--TTSCCSSSCEEEECSSH-HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHhCCCeecCC--CCCCCccEEEEEEECCH-HHHHHHHHHHhhcC
Confidence            99999999999999988543  334     445555311 11233555565543

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.92  E-value=2.3e-24  Score=222.17  Aligned_cols=319  Identities=18%  Similarity=0.135  Sum_probs=211.7

Q ss_pred             EecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHH
Q 009673          107 LIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT  186 (529)
Q Consensus       107 L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~  186 (529)
                      +..+.+++++++++++...+.+.+         |...+...++|    +.+++++|.+.     .+.++||++|+..++.
T Consensus         7 ~~~~~~~~~~~v~~a~~~~~~~~~---------~~~~~~~~~l~----~~la~~~~~~~-----~~~~~sGt~al~~al~   68 (367)
T 3nyt_A            7 LKNQQARIKDKIDAGIQRVLRHGQ---------YILGPEVTELE----DRLADFVGAKY-----CISCANGTDALQIVQM   68 (367)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCC---------CSSCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHH
T ss_pred             ccccccccCHHHHHHHHHHHhcCC---------ccCChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHH
Confidence            333444567889999887775432         11234455555    77888999873     3567899999999999


Q ss_pred             hh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCC
Q 009673          187 AI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRD  265 (529)
Q Consensus       187 al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~  265 (529)
                      ++ ++|||+|+++++.|.+...        .+...|.  +++.++++++++.+|+++|++.+++ ++++|+.+++ ++..
T Consensus        69 ~~~~~~gd~Vi~~~~~~~~~~~--------~~~~~G~--~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~-~G~~  136 (367)
T 3nyt_A           69 ALGVGPGDEVITPGFTYVATAE--------TVALLGA--KPVYVDIDPRTYNLDPQLLEAAITP-RTKAIIPVSL-YGQC  136 (367)
T ss_dssp             HTTCCTTCEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTCSBCGGGTGGGCCT-TEEEECCBCG-GGCC
T ss_pred             HhCCCCcCEEEECCCccHHHHH--------HHHHcCC--EEEEEecCCccCCcCHHHHHHhcCc-CCcEEEeeCC-ccCh
Confidence            99 8999999999988765431        2334454  7788888877789999999999977 8888874432 2347


Q ss_pred             CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecc--cccccC-CCCeEEEeeCCCcchhHHHhhhcc
Q 009673          266 FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTT--HKSLRG-PRGGMIFFKKDPVLGVELESAINN  342 (529)
Q Consensus       266 ~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~--hK~l~G-prgG~i~~~~~~~~~~~l~~~i~~  342 (529)
                      .|+++|.++|+++|++||+|++|+.|....+.....  ..|++++|+  ||++++ +.||+++++++     ++.+++..
T Consensus       137 ~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~--~~di~~~Sf~~~K~l~~~g~gg~~~~~~~-----~l~~~~~~  209 (367)
T 3nyt_A          137 ADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCN--LSTVACTSFFPSAPLGCYGDGGAIFTNDD-----ELATAIRQ  209 (367)
T ss_dssp             CCHHHHHHHHHHTTCCBEEECTTTTTCEETTEETTS--SSSEEEEECCTTSSSCCSSCCEEEEESCH-----HHHHHHHH
T ss_pred             hhHHHHHHHHHHcCCEEEEECccccCCeECCeeccC--CCCEEEEECCCCCcCCCcCceeEEEeCCH-----HHHHHHHH
Confidence            899999999999999999999998876643322111  238999996  899966 45799998763     56555443


Q ss_pred             cccC-----------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC----CCceE
Q 009673          343 AVFP-----------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS----DNHLV  407 (529)
Q Consensus       343 ~~~p-----------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt----~~~~~  407 (529)
                      ....           +.....+... +++  ++..+  ..+++..++..++++++.+.|.+.|+.+.....    ..+.+
T Consensus       210 ~~~~g~~~~~~~~~~g~~~~~~~~~-aa~--~~~~l--~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~  284 (367)
T 3nyt_A          210 IARHGQDRRYHHIRVGVNSRLDTLQ-AAI--LLPKL--EIFEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQY  284 (367)
T ss_dssp             HTBTTEEETTEECSCCCBCCCCHHH-HHH--HHHHH--HTHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSE
T ss_pred             HHhcCCCcCceeeccCcCCCccHHH-HHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEE
Confidence            2211           1111112211 111  22222  234566777888889999999887765543211    11223


Q ss_pred             EEccCCCCCcHHHHHHhHhcCCeEEcCCCC-CCCC-CCCC-------------CCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKILDMASITLNKNSV-PGDK-SALV-------------PGGIRIGSPAMTTRGFSEKEFVAIADF  472 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~-Pg~~-~~~~-------------~~~iRig~~~~tt~g~~~~d~~~la~~  472 (529)
                      .+.+.    +.+.+.+.|.+.||.++..+. |.+. +++.             ...||+++..    .++++|++++++.
T Consensus       285 ~~~~~----~~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~----~~t~~~i~~v~~~  356 (367)
T 3nyt_A          285 TVRMD----NRESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHP----YLDTASIKIICAA  356 (367)
T ss_dssp             EEECS----SHHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCT----TCCHHHHHHHHHH
T ss_pred             EEEeC----CHHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCC----CCCHHHHHHHHHH
Confidence            33332    567888999999999876542 3221 1111             2468887653    3669999999998


Q ss_pred             HHH
Q 009673          473 IHE  475 (529)
Q Consensus       473 i~~  475 (529)
                      |++
T Consensus       357 ~~~  359 (367)
T 3nyt_A          357 LTN  359 (367)
T ss_dssp             HHC
T ss_pred             HHH
Confidence            864

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.91  E-value=2.8e-23  Score=218.46  Aligned_cols=332  Identities=17%  Similarity=0.225  Sum_probs=216.8

Q ss_pred             eEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673          106 ELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF  182 (529)
Q Consensus       106 ~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g-~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~  182 (529)
                      +|..+++.  .|+.+++++...+...+         |.. .+...+++    +.+++++|.+.    + +...+|++|+.
T Consensus        20 ~l~~~~p~~~~p~~~~~a~~~~~~~~~---------y~~~~~~~~~l~----~~la~~~~~~~----v-~~~~ggt~al~   81 (424)
T 2po3_A           20 PLLVGRPNRIDRARLYERLDRALDSQW---------LSNGGPLVREFE----ERVAGLAGVRH----A-VATCNATAGLQ   81 (424)
T ss_dssp             CEETTCCCCCCHHHHHHHHHHHHHHTC---------CSSSCHHHHHHH----HHHHHHHTSSE----E-EEESCHHHHHH
T ss_pred             cccccCCCCCChHHHHHHHHHHHhcCC---------cccCCHHHHHHH----HHHHHHhCCCe----E-EEeCCHHHHHH
Confidence            35555653  46789999887775321         222 24445555    67788888752    2 44566679999


Q ss_pred             HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673          183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY  262 (529)
Q Consensus       183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~  262 (529)
                      .++.++. +||+|+++++.|.++..        .+...|.  +++.++++++++.+|+++|++.+++ ++++|+++++ .
T Consensus        82 ~~l~~l~-~gd~Vlv~~~~~~~~~~--------~~~~~G~--~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~-t  148 (424)
T 2po3_A           82 LLAHAAG-LTGEVIMPSMTFAATPH--------ALRWIGL--TPVFADIDPDTGNLDPDQVAAAVTP-RTSAVVGVHL-W  148 (424)
T ss_dssp             HHHHHHT-CCSEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTSSBCHHHHGGGCCT-TEEEEEEECG-G
T ss_pred             HHHHHcC-CCCEEEECCCccHHHHH--------HHHHcCC--EEEEEecCCCcCCcCHHHHHHhhCc-CCcEEEEECC-C
Confidence            9999885 89999999998765431        2334554  7777778765788999999999987 7899888642 3


Q ss_pred             CCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEeccc--ccccCCCCeEEEeeCCCcchhHHHhh
Q 009673          263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESA  339 (529)
Q Consensus       263 p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~  339 (529)
                      +...++++|.++|+++|++||+|++|..|+...+.   ++. ..|++++|+|  |+++|+++|+++++++     ++.++
T Consensus       149 G~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~---~~~~~~di~~~S~sk~K~l~~~~~G~~v~~~~-----~l~~~  220 (424)
T 2po3_A          149 GRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGR---PAGSLGDAEVFSFHATKAVNAFEGGAVVTDDA-----DLAAR  220 (424)
T ss_dssp             GCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSSCCSSCEEEEESCH-----HHHHH
T ss_pred             CCcCCHHHHHHHHHHcCCEEEEECccccCCeECCe---ecccccCEEEEeCCCCCCccCCCCeEEEeCCH-----HHHHH
Confidence            34789999999999999999999998877664332   121 3589999988  8898899999999842     56555


Q ss_pred             hcccccCCC--------CCCC-hHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEec-C-CCC-C-c
Q 009673          340 INNAVFPGL--------QGGP-HNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS-G-GSD-N-H  405 (529)
Q Consensus       340 i~~~~~p~~--------~g~p-~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~-~-gt~-~-~  405 (529)
                      +......+.        .|.+ ....+++ +.++...  ..++++.++..++++++.+.|.+. |+.+.. + +.. + +
T Consensus       221 l~~~~~~~~~~~~~~~~~g~~~~~~~~~a-a~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~  297 (424)
T 2po3_A          221 IRALHNFGFDLPGGSPAGGTNAKMSEAAA-AMGLTSL--DAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQ  297 (424)
T ss_dssp             HHHHHBTTTTCTTCCTTCCCBCCCCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCC
T ss_pred             HHHHHhcCccccccccccCcCCCcCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccE
Confidence            443221111        1111 1112221 1223221  245667788888888888888774 888765 2 211 2 3


Q ss_pred             eEEEccCC--CCCcHHHHHHhHhcCCeEEcCCCCCC-CC-CCC-------CC-------CeEEEccCCCccCCCCHHHHH
Q 009673          406 LVLVDLRP--MGIDGARVEKILDMASITLNKNSVPG-DK-SAL-------VP-------GGIRIGSPAMTTRGFSEKEFV  467 (529)
Q Consensus       406 ~~~v~~~~--~~i~~~~~~~~L~~~GI~v~~~~~Pg-~~-~~~-------~~-------~~iRig~~~~tt~g~~~~d~~  467 (529)
                      ++.+.+..  .+++..++.+.|.++||.+.....|. +. ..+       .+       ..||+++..    .++++|++
T Consensus       298 ~~~i~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~----~~t~e~i~  373 (424)
T 2po3_A          298 YVIVEIDEATTGIHRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGT----AIGDDDIR  373 (424)
T ss_dssp             CEEEEECHHHHSSCHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCST----TCCHHHHH
T ss_pred             EEEEEECCccchhhHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCC----CCCHHHHH
Confidence            33355532  14567788889999999997532211 00 000       01       127777543    35699999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 009673          468 AIADFIHEGVEITLEA  483 (529)
Q Consensus       468 ~la~~i~~~~~~~~~~  483 (529)
                      ++++.|.+++....+.
T Consensus       374 ~~~~~L~~~~~~~~~~  389 (424)
T 2po3_A          374 RVADLLRLCATRGREL  389 (424)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhHHH
Confidence            9999999998766544

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=99.91  E-value=2.1e-23  Score=224.33  Aligned_cols=331  Identities=12%  Similarity=0.036  Sum_probs=212.9

Q ss_pred             CcHHHHHHHhhhhhcc---CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhc
Q 009673          114 TSRAVMEAVGSCLTNK---YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAIL  189 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~---y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all  189 (529)
                      .|+.+++++...+.+.   ...+|+      ......++++.+.+++.+.+|.+.+.  .+|.+++|+ +|+..++.+++
T Consensus       107 ~p~~~~~~a~~~l~~~~~~~~~~Y~------~~~G~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~~~al~~~~~~l~  178 (500)
T 3tcm_A          107 FSADSISRAKQILAMIPGRATGAYS------HSQGIHGLRDAIASGIASRDGFPANA--DDIFLTDGASPGVHLMMQLLI  178 (500)
T ss_dssp             SCHHHHHHHHHHHTTSTTSCSSSCC------CTTCCHHHHHHHHHHHHHHHSSCCCG--GGEEEESSSHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHcCCCCcCCCcC------CCcChHHHHHHHHHHHHhhcCCCCCc--ccEEEcCCHHHHHHHHHHHHc
Confidence            5677777766665432   112232      22223466666667888777854321  134556665 99999999998


Q ss_pred             -CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhc-----CCcEEEEcCCCC
Q 009673          190 -KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF-----RPKLIIAGASAY  262 (529)
Q Consensus       190 -~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~-----~pklIi~~~s~~  262 (529)
                       +|||+|++++|.|.++..        .+...|.  +++.|+++++ ++.+|+++|++.+++.     ++++|++..++|
T Consensus       179 ~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~N  248 (500)
T 3tcm_A          179 RNEKDGILVPIPQYPLYSA--------SIALHGG--ALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGN  248 (500)
T ss_dssp             CSTTEEEEEEESCCTHHHH--------HHHHTTC--EEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCT
T ss_pred             CCCCCEEEEeCCCcHhHHH--------HHHHcCC--EEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCC
Confidence             899999999998865431        3344565  6677777654 4799999999999864     688998888898


Q ss_pred             CC--CC---CHHHHHHHHHHhCCEEEEeccccccccccc-ccCCCC----------C-cc-cEEEecccccc---cCCCC
Q 009673          263 PR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAAS-VVADPF----------K-YC-DVVTTTTHKSL---RGPRG  321 (529)
Q Consensus       263 p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~-~~~~~~----------~-~a-Div~~S~hK~l---~Gprg  321 (529)
                      |+  ..   ++++|.++|+++|+++|+|++|.. +++.+ ....++          . .. .+++.|+||+|   +|.|+
T Consensus       249 PtG~~~s~~~l~~i~~la~~~~~~li~Deay~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~  327 (500)
T 3tcm_A          249 PTGQVLAEENQYDIVKFCKNEGLVLLADEVYQE-NIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRG  327 (500)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCC
T ss_pred             CCcccCCHHHHHHHHHHHHHcCCEEEEecCccc-cccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccce
Confidence            87  43   467778889999999999999654 33322 111111          1 11 26778999987   58999


Q ss_pred             eEEEe---eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh---------cCchHHHHHHHHHHHHHHHHHH
Q 009673          322 GMIFF---KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA---------QSPEFKVYQNKVVSNCRALASR  389 (529)
Q Consensus       322 G~i~~---~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~---------~~~~~~~~~~~i~~~a~~l~~~  389 (529)
                      ||+++   ++      ++.+.+......  ..+++....++++.++...         ...+..++.+++.++++.+.+.
T Consensus       328 G~~~~~~~~~------~~~~~l~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~  399 (500)
T 3tcm_A          328 GYFEITGFSA------PVREQIYKIASV--NLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHA  399 (500)
T ss_dssp             EEEEEESCCT------THHHHHHHHHHT--TCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCCH------HHHHHHHHHHhc--ccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99988   55      566555443211  1233444444444444310         0122356677888899999999


Q ss_pred             HHhc-CcEEecCCCCCceEEEccCCC----------CCcHHH--HHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCC
Q 009673          390 LVEL-GYKLVSGGSDNHLVLVDLRPM----------GIDGAR--VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAM  456 (529)
Q Consensus       390 L~~~-G~~v~~~gt~~~~~~v~~~~~----------~i~~~~--~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~  456 (529)
                      |++. |+.+..+. .+.+.|+++...          +.+.+.  +.++|++.||.+..+..++.  +...++|||++.  
T Consensus       400 L~~~~g~~~~~~~-g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~--~~g~~~iRis~~--  474 (500)
T 3tcm_A          400 FNKLEGITCNEAE-GAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQ--VPGTWHFRCTIL--  474 (500)
T ss_dssp             HHTSTTEECCCCC-BTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCC--CTTCCBEEEESC--
T ss_pred             HhcCCCcEEecCC-eEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCC--CCCCCEEEEEEC--
Confidence            9885 88877542 344555444311          122222  45788889999965433321  123568999975  


Q ss_pred             ccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          457 TTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       457 tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                          .++++++++++.|.++++..
T Consensus       475 ----~~~e~i~~~i~~l~~~~~~~  494 (500)
T 3tcm_A          475 ----PQEDKIPAVISRFTVFHEAF  494 (500)
T ss_dssp             ----SCTTTHHHHHHHHHHHHHHH
T ss_pred             ----CCHHHHHHHHHHHHHHHHHH
Confidence                34689999999998887644

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=99.91  E-value=2.8e-23  Score=214.27  Aligned_cols=287  Identities=14%  Similarity=0.127  Sum_probs=194.7

Q ss_pred             HHHHHHc-CCCCCCCceeeecCCh-HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC
Q 009673          155 KRALAAF-NLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD  232 (529)
Q Consensus       155 ~~la~~~-g~~~~~~~~~V~~~sG-s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~  232 (529)
                      +.+++++ +++++    +|.+++| ++|+..++.++++|||+|++.+|.|.++..        .+...|.  +++.++++
T Consensus        70 ~~la~~~~~~~~~----~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~  135 (375)
T 3op7_A           70 KSVSQLYTGVKPE----QILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD--------IPKSLGA--EVDLWQIE  135 (375)
T ss_dssp             HHHHTTSSSCCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH--------HHHHTTC--EEEEEEEE
T ss_pred             HHHHHHhccCChh----hEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEEecc
Confidence            5566666 45554    3444555 599999999999999999999998765431        2334555  55666665


Q ss_pred             C-CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCCC--c
Q 009673          233 E-STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--Y  304 (529)
Q Consensus       233 ~-~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~  304 (529)
                      + +++.+|+++|++++++ ++++|++++++||+  ..+   +++|.++|++||+++|+|++|..+ ...+ .+....  .
T Consensus       136 ~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~-~~~~-~~~~~~~~~  212 (375)
T 3op7_A          136 EENGWLPDLEKLRQLIRP-TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSF-SELD-VPSIIEVYD  212 (375)
T ss_dssp             GGGTTEECHHHHHHHCCT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCC-SSSC-CCCHHHHCT
T ss_pred             ccCCCCCCHHHHHHhhcc-CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccC-CCchhhhcC
Confidence            3 3467899999999987 89999999888886  667   999999999999999999996542 2221 111111  3


Q ss_pred             ccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 009673          305 CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN  382 (529)
Q Consensus       305 aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~  382 (529)
                      .+++++|+||++  +|.|+|++++++      ++.+.+.........+++..... +...+++.. ....++..+++.++
T Consensus       213 ~~i~~~s~sK~~~~~G~r~G~v~~~~------~l~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~-~~~~~~~~~~~~~~  284 (375)
T 3op7_A          213 KGIAVNSLSKTYSLPGIRIGWVAANH------QVTDILRDYRDYTMICAGVFDDL-VAQLALAHY-QEILERNRHILEEN  284 (375)
T ss_dssp             TEEEEEESSSSSSCGGGCCEEEECCH------HHHHHHTTTGGGTTSCCCHHHHH-HHHHHHHTH-HHHHHHHHHHHHHH
T ss_pred             CEEEEeEChhhcCCcccceEEEEeCH------HHHHHHHHHHhhhccCCCcHHHH-HHHHHHhcc-HHHHHHHHHHHHHH
Confidence            458899999997  578889999976      78777765443333333333333 333355532 12335667777888


Q ss_pred             HHHHHHHHHh-cCcEEecCCCCCceEEEccCCCCCcHHHHHHh-HhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCC
Q 009673          383 CRALASRLVE-LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG  460 (529)
Q Consensus       383 a~~l~~~L~~-~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g  460 (529)
                      ++.+.+.|++ .++.+..+. ..++.++.+. .+.+..++.+. |+++||.+..+..++     .++++||++.      
T Consensus       285 ~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~~------  351 (375)
T 3op7_A          285 LAILDQWIEEEPLVSYIRPA-VVSTSFVKIA-VDMPMEDFCLQLLQEHGVLLVPGNRFE-----RDGYVRLGFA------  351 (375)
T ss_dssp             HHHHHHHHHHCTTEEECCCS-SSSCEEEEEC-CSSCHHHHHHHHHHHHCEECEEGGGGT-----CTTEEEECCC------
T ss_pred             HHHHHHHHhhCCCceEecCC-CeEEEeEEcC-CCCCHHHHHHHHHHhCCEEEeChhhhC-----CCCeEEEEec------
Confidence            9999999988 477766542 2344555554 24456665554 578999985433221     2679999854      


Q ss_pred             CCHHHHHHHHHHHHHHHHH
Q 009673          461 FSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       461 ~~~~d~~~la~~i~~~~~~  479 (529)
                      ..++++++.++.|.++++.
T Consensus       352 ~~~~~i~~~l~~l~~~l~~  370 (375)
T 3op7_A          352 CEQETLIKGLEKLSQFLRR  370 (375)
T ss_dssp             SCHHHHHHHHHHHHHHHGG
T ss_pred             CCHHHHHHHHHHHHHHHHH
Confidence            3358899999999887753

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=99.91  E-value=3.2e-23  Score=223.50  Aligned_cols=312  Identities=13%  Similarity=0.074  Sum_probs=205.7

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC--------------CCCEEEEcCCCCCcccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--------------PHDRIMGLDLPHGGHLS  207 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--------------pGD~Vl~~~~~~~g~~s  207 (529)
                      ..+...++|+.+.+|+++++|.+.+.- ..+.+++||+||..++.++.+              |++.|+++++.|.+.. 
T Consensus       129 ~~p~~~~le~~~~~~l~~~~g~~~~~~-~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~-  206 (511)
T 3vp6_A          129 IAPVFVLMEQITLKKMREIVGWSSKDG-DGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIK-  206 (511)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHTCCSSSC-EEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHH-
T ss_pred             cCchHHHHHHHHHHHHHHHhCCCCCCC-ceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHH-
Confidence            345678899999999999999984211 234556777999988887654              6789998887765432 


Q ss_pred             ccccccccccccccceE-EEEEcccCCCCCCCCHHHHHHHhhhcC-----CcEEEEcCCCCCC--CCCHHHHHHHHHHhC
Q 009673          208 HGFMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAGASAYPR--DFDYPRMRQIADAVG  279 (529)
Q Consensus       208 ~g~~~~~~~i~~~g~~~-~~v~~~v~~~~~~iD~d~le~~i~~~~-----pklIi~~~s~~p~--~~d~~~i~~ia~~~g  279 (529)
                             +.+...|.+. +++.++++ +++.+|+++|++++++.+     |++|+++.+++++  ..|+++|+++|++||
T Consensus       207 -------~~~~~~g~g~~~~~~v~~d-~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~  278 (511)
T 3vp6_A          207 -------KAGAALGFGTDNVILIKCN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYN  278 (511)
T ss_dssp             -------HHHHHTTSCGGGEEEECBC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHT
T ss_pred             -------HHHHHcCCCCCcEEEeecC-CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcC
Confidence                   2334455422 45556666 468999999999998632     8888887665554  789999999999999


Q ss_pred             CEEEEecccccccccccccCCC---CCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccC---------
Q 009673          280 ALLMMDMAHISGLVAASVVADP---FKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFP---------  346 (529)
Q Consensus       280 ~~livD~ah~~Gli~~~~~~~~---~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p---------  346 (529)
                      +|+++|++|..|..........   +.++|++++++||||.+|.+ |+++++++     ++.........+         
T Consensus       279 ~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~-----~~~~~~~~~~~~yl~~~~~~~  353 (511)
T 3vp6_A          279 LWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEK-----GILQGCNQMHASYLFQQDKHY  353 (511)
T ss_dssp             CEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESST-----THHHHHHCCCCTTTCCSSCSS
T ss_pred             CEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCH-----HHHHHHhccCCccccCccccc
Confidence            9999999988776643322111   23679999999999988877 88888774     333322110000         


Q ss_pred             ---------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecC-CCCCceEEEccCCCC
Q 009673          347 ---------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSG-GSDNHLVLVDLRPMG  415 (529)
Q Consensus       347 ---------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~-gt~~~~~~v~~~~~~  415 (529)
                               ..+++... ...+++.+++.....+++++.++..++++++.+.|++ .|++++.+ .....++.+.+.+.+
T Consensus       354 ~~~~~~~~~~~~~~r~~-~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~  432 (511)
T 3vp6_A          354 DVSYDTGDKAIQCGRHV-DIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQS  432 (511)
T ss_dssp             CGGGCCGGGSSCSSCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECCGG
T ss_pred             ccccCccCCCCCCCCch-HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCcc
Confidence                     01112111 2334455666555567789999999999999999988 49998862 112233444333332


Q ss_pred             Cc---------------HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEcc-CCCccCCCCHHHHHHHHHHHHHHH
Q 009673          416 ID---------------GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS-PAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       416 i~---------------~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~-~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      ++               ..++.+.|.+.|+.+.. +.|..   ...+.+|+++ +..    .+++|++++++.|.++-
T Consensus       433 ~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~-~~~~~---~~~~~lRi~~~~~~----~t~~di~~ll~~i~~~~  502 (511)
T 3vp6_A          433 LRGVPDSPQRREKLHKVAPKIKALMMESGTTMVG-YQPQG---DKANFFRMVISNPA----ATQSDIDFLIEEIERLG  502 (511)
T ss_dssp             GSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEE-EEEET---TEEEEEEECCCCTT----CCHHHHHHHHHHHHHHH
T ss_pred             ccccccchhHHHHHHHHHHHHHHHHHhcCCEEEE-EEEeC---CceEEEEEEecCCC----CCHHHHHHHHHHHHHHH
Confidence            21               12467777777754321 11211   1124699987 333    45899999999887754

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.91  E-value=6.6e-24  Score=219.27  Aligned_cols=330  Identities=12%  Similarity=0.075  Sum_probs=220.8

Q ss_pred             cCCCCCcHHHHHHHhhhhhccCCCCCCC-CCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeec-C-ChHHHHHHHH
Q 009673          109 ASENFTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-L-SGSPANFEVY  185 (529)
Q Consensus       109 asen~~~~~V~eal~~~l~~~y~~G~p~-~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~-~-sGs~A~~~~l  185 (529)
                      ++..+.|++|+++|...+.+.++.|... ..+..+.++.+.++ .+++.+++++|++.++   +|.+ + +||+++.+++
T Consensus        19 at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~-~ar~~la~ll~~~~~~---evif~t~~~T~a~n~a~   94 (377)
T 3e77_A           19 YFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIIN-NTENLVRELLAVPDNY---KVIFLQGGGCGQFSAVP   94 (377)
T ss_dssp             ECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHH-HHHHHHHHHHTCCTTE---EEEEESSHHHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHH-HHHHHHHHHhCCCCCC---eEEEEcCchHHHHHHHH
Confidence            3455789999999999887655432211 01233456666666 5789999999997531   2333 4 5669999999


Q ss_pred             HhhcCC--CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC-
Q 009673          186 TAILKP--HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-  262 (529)
Q Consensus       186 ~all~p--GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~-  262 (529)
                      .+++.+  ||+|++....+   +++.+.   +.....|  +.++.++++ +++.+++++++..+++ ++++|.+++..+ 
T Consensus        95 ~~l~~~~~Gd~v~~~~~g~---~~~~~~---~~a~~~G--~~~~~~~~~-~~~~~~~~~~~~~i~~-~t~lV~~~h~et~  164 (377)
T 3e77_A           95 LNLIGLKAGRCADYVVTGA---WSAKAA---EEAKKFG--TINIVHPKL-GSYTKIPDPSTWNLNP-DASYVYYCANETV  164 (377)
T ss_dssp             HHHGGGSTTCEEEECCCSH---HHHHHH---HHHTTTS--EEEECSCCC-SSSCSCCCGGGCCCCT-TCSCEEEESEETT
T ss_pred             HhccCCCCCCeEEEEECCH---HHHHHH---HHHHHhC--CceEEeccC-CCcCCCCChHHhccCC-CccEEEEeCccCc
Confidence            999865  99998776543   232221   1122234  355555554 3455677777766766 889888775444 


Q ss_pred             -CCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCc-----chhH
Q 009673          263 -PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPV-----LGVE  335 (529)
Q Consensus       263 -p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~-----~~~~  335 (529)
                       +...|+     ||+++|+++++|++|+.|.+..++.     ..|++++|.||++ ||.| |+++++++..     ..+.
T Consensus       165 tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~-----~~~~~~~s~~K~~-gp~G~g~l~~~~~~l~~~~~~~p~  233 (377)
T 3e77_A          165 HGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVS-----KFGVIFAGAQKNV-GSAGVTVVIVRDDLLGFALRECPS  233 (377)
T ss_dssp             TTEECSS-----CCCCTTCCEEEECTTTTTSSCCCGG-----GCSEEEEEGGGTT-SCTTCEEEEEETTSCSCCCTTSCG
T ss_pred             hheEchh-----hhccCCCEEEEEcccccCCCCCchh-----hcCEEEEeccccc-CCCccEEEEEcHHHHhhccCCCCc
Confidence             457777     5788999999999999887654432     2357899999999 8999 9999998531     0001


Q ss_pred             H---HhhhcccccCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCC--CCc-eE
Q 009673          336 L---ESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVEL-GYKLVSGGS--DNH-LV  407 (529)
Q Consensus       336 l---~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt--~~~-~~  407 (529)
                      +   ....+   .....++|+...++++..|++.+... ++++..++..+.++++.+.|.+. |+.+.....  .+. .+
T Consensus       234 ~~~~~~~~~---~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~iv  310 (377)
T 3e77_A          234 VLEYKVQAG---NSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNI  310 (377)
T ss_dssp             GGCHHHHHT---TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEE
T ss_pred             hhhHHHHhh---cCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEE
Confidence            1   11111   12235799999999999999988766 68889999999999999999985 887543111  112 23


Q ss_pred             EEccCCCCCcH-----HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDG-----ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       408 ~v~~~~~~i~~-----~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      .+.+.  ++++     ..+...|+++||.+.    +|+.   ..+++|+|+...+    +++|+++++++|+++++.
T Consensus       311 sf~~~--~~~~~~~~~~~~l~~l~~~Gi~~~----~g~~---~~g~iRiS~~~~~----t~edId~l~~al~~~~~~  374 (377)
T 3e77_A          311 PFRIG--NAKGDDALEKRFLDKALELNMLSL----KGHR---SVGGIRASLYNAV----TIEDVQKLAAFMKKFLEM  374 (377)
T ss_dssp             EEEES--STTCCHHHHHHHHHHHHHTTEESC----BCCT---TTCSEEEECCTTS----CHHHHHHHHHHHHHHHHH
T ss_pred             EEEcC--CCCCchhHHHHHHHHHHHCCcEEe----CCCC---cCCEEEEECCCCC----CHHHHHHHHHHHHHHHHH
Confidence            33333  3322     235566668899974    3432   2467999986554    489999999999988753

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=99.91  E-value=9.8e-23  Score=208.73  Aligned_cols=316  Identities=15%  Similarity=0.118  Sum_probs=214.9

Q ss_pred             hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-H
Q 009673          102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S  178 (529)
Q Consensus       102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s  178 (529)
                      ++.|+|..++|+  +++.|++++...+...  .+|+.       +...+++    +++++++|++++    +|.+++| +
T Consensus        26 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~-------~~~~~l~----~~la~~~~~~~~----~i~~~~g~t   88 (361)
T 3ftb_A           26 RELLDYSSNINPLGIPKSFLNNIDEGIKNL--GVYPD-------VNYRRLN----KSIENYLKLKDI----GIVLGNGAS   88 (361)
T ss_dssp             --CEETTCCCCTTCSCHHHHTTHHHHHHGG--GSCCC-------TTCHHHH----HHHHHHHTCCSC----EEEEESSHH
T ss_pred             CCEEEecCCCCCCCCCHHHHHHHHHHHHHh--cCCCC-------ccHHHHH----HHHHHHhCCCcc----eEEEcCCHH
Confidence            356888888775  5899999998777542  23332       1123444    778888898775    3444555 5


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      +|+..++.++    |+|++++|.|.++..        .+...|.  +++.+++++ ++.+|++++++.+++  +++|+++
T Consensus        89 ~al~~~~~~~----d~vi~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~-~~~~~~~~l~~~l~~--~~~v~i~  151 (361)
T 3ftb_A           89 EIIELSISLF----EKILIIVPSYAEYEI--------NAKKHGV--SVVFSYLDE-NMCIDYEDIISKIDD--VDSVIIG  151 (361)
T ss_dssp             HHHHHHHTTC----SEEEEEESCCTHHHH--------HHHHTTC--EEEEEECCT-TSCCCHHHHHHHTTT--CSEEEEE
T ss_pred             HHHHHHHHHc----CcEEEecCChHHHHH--------HHHHcCC--eEEEeecCc-ccCCCHHHHHHhccC--CCEEEEe
Confidence            8999888887    999999987755421        2334454  666777763 457888999999976  8999999


Q ss_pred             CCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-----cccEEEecccccc--cCCCCeEEE-
Q 009673          259 ASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-----YCDVVTTTTHKSL--RGPRGGMIF-  325 (529)
Q Consensus       259 ~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-----~aDiv~~S~hK~l--~GprgG~i~-  325 (529)
                      .++||+  ..   ++++|+++|++||+++|+|++|..+ ... .......     ...++++|+||++  +|.|.|+++ 
T Consensus       152 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~  229 (361)
T 3ftb_A          152 NPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEF-TGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGIT  229 (361)
T ss_dssp             TTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGG-TCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEE
T ss_pred             CCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhh-cCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEe
Confidence            888886  44   4777888888999999999997533 221 1111111     2347889999987  577889988 


Q ss_pred             eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcE-EecCCCC
Q 009673          326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYK-LVSGGSD  403 (529)
Q Consensus       326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~-v~~~gt~  403 (529)
                      .++      ++.+.+.....++   +++....+++..+++.  ...+++..+++.++++.+.+.|++. |+. +..+  .
T Consensus       230 ~~~------~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~  296 (361)
T 3ftb_A          230 NNK------EIAAKIKAKQNPW---NINCFAEMAAINCLKD--TNYIEESLLWIKKERKRFIEELNKIGFIKRVFSP--H  296 (361)
T ss_dssp             SCH------HHHHHHHTTSCTT---CSCHHHHHHHHHTSSC--HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECC--S
T ss_pred             CCH------HHHHHHHhhCCCC---CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCC--C
Confidence            555      7777776543322   3444455554445542  1334777888899999999999885 777 5543  2


Q ss_pred             CceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          404 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       404 ~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ..++++++..  .+..++.+.|.+.||.+..+...   ++..++.+||++.       +++|++++.+.|+++.+
T Consensus       297 ~~~~~~~~~~--~~~~~l~~~l~~~gi~v~~g~~~---~~~~~~~iRis~~-------~~~~~~~l~~~l~~~~~  359 (361)
T 3ftb_A          297 ANFVLCRLEN--ISGEKLYDSLLKEDIVIRRCCNF---IGLDDSFVRFAIK-------DEKKNTKFLRALKGVEN  359 (361)
T ss_dssp             SSEEEEEESS--SCHHHHHHHHHTTTEECEECTTS---TTCCTTEEEEECC-------CHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEcCC--CCHHHHHHHHHHCCeEEeeCccC---CCCCCCEEEEEcC-------CHHHHHHHHHHHHHHHh
Confidence            3456676653  46778888888889998643322   2234678999964       47889999999887654

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.91  E-value=2.2e-23  Score=214.50  Aligned_cols=328  Identities=11%  Similarity=0.036  Sum_probs=220.4

Q ss_pred             cceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCC---CCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeee--cCCh
Q 009673          103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKR---YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQ--PLSG  177 (529)
Q Consensus       103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r---~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~--~~sG  177 (529)
                      +.+++.++..++|++|+++|...+.+.++.  +.+-   .+.+.++.+.++ .+++.+++++|++.+.   +|.  +.+|
T Consensus         5 ~~~~f~pgpt~~~~~V~~a~~~~~~~~~~~--~~s~~~~~hr~~~~~~~~~-~~r~~la~ll~~~~~~---~v~f~t~~~   78 (361)
T 3m5u_A            5 RKINFSAGPSTLPLEILEQAQKELCDYQGR--GYSIMEISHRTKVFEEVHF-GAQEKAKKLYELNDDY---EVLFLQGGA   78 (361)
T ss_dssp             CCEECCSSSCCCCHHHHHHHHHTSSSGGGS--SSCGGGSCSSSHHHHHHHH-HHHHHHHHHHTCCTTE---EEEEESSHH
T ss_pred             ceEeecCCCCCCcHHHHHHHHHHHHhcccC--CceeeccCCCCHHHHHHHH-HHHHHHHHHhCCCCCc---eEEEEcCcH
Confidence            567889999999999999999888654432  2221   123455666666 5789999999997431   233  3445


Q ss_pred             HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCC-CCCHHHHHHHhhhcCCcEEE
Q 009673          178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG-LVDYDMLEKTAILFRPKLII  256 (529)
Q Consensus       178 s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~-~iD~d~le~~i~~~~pklIi  256 (529)
                      |+++.+++.+++ +||+++.....   +++|.+..   .....|.  ++..++++.+.. .++++. +  +++ ++++|.
T Consensus        79 T~a~n~~~~~~~-~~~~~~~i~~~---~~~~~~~~---~a~~~G~--~v~~~~~~~~g~~~~~~~~-~--l~~-~t~lv~  145 (361)
T 3m5u_A           79 SLQFAMIPMNLA-LNGVCEYANTG---VWTKKAIK---EAQILGV--NVKTVASSEESNFDHIPRV-E--FSD-NADYAY  145 (361)
T ss_dssp             HHHHHHHHHHHC-CSSCEEEEECS---HHHHHHHH---HHHHTTC--CEEEEEECTTTTSCSCCCC-C--CCT-TSSEEE
T ss_pred             HHHHHHHHHhcC-CCCeEEEEeCC---HHHHHHHH---HHHHcCC--ceEEEecccCcCCCcCChh-h--cCC-CCCEEE
Confidence            699999999998 89976443322   23332211   1122344  444555553321 156665 3  766 899988


Q ss_pred             EcCCCC--CCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcch
Q 009673          257 AGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLG  333 (529)
Q Consensus       257 ~~~s~~--p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~  333 (529)
                      +.+..+  +...|.     |++ +|+++++|++|++|.+..++     ...|++++|.||++ ||.| |++++++     
T Consensus       146 ~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id~-----~~~d~~~~s~~K~~-gp~G~g~l~~~~-----  208 (361)
T 3m5u_A          146 ICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVDF-----SNIALFYGGVQKNA-GISGLSCIFIRK-----  208 (361)
T ss_dssp             EESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCCC-----TTEEEEEEETTTTS-SCTTCEEEEEEH-----
T ss_pred             EeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCCc-----ccCCEEEEechhcc-CCCccEEEEEcH-----
Confidence            875544  334441     344 49999999999988764433     24799999999999 8999 9999998     


Q ss_pred             hHHHhhhccc------------ccCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcC-c-EEe
Q 009673          334 VELESAINNA------------VFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG-Y-KLV  398 (529)
Q Consensus       334 ~~l~~~i~~~------------~~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G-~-~v~  398 (529)
                       ++.+++...            ......++|+...+.++..|++.+... ++++..++..+.++++.+.|.+.+ + .+.
T Consensus       209 -~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~  287 (361)
T 3m5u_A          209 -DMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGH  287 (361)
T ss_dssp             -HHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEES
T ss_pred             -HHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeecc
Confidence             444333210            011234789999999999999988877 689999999999999999999866 5 554


Q ss_pred             cCC--CCCceEEEccCC-CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          399 SGG--SDNHLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       399 ~~g--t~~~~~~v~~~~-~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      .+.  ...+.+.+.+.. .+++ ..+...|+++||.+..    |+.   ..+++|+|+..++    +++|+++++++|++
T Consensus       288 ~~~~~rs~~ivsf~~~~~~~~~-~~~~~~L~~~gI~~~~----g~~---~~g~iRiS~~~~~----t~edId~l~~al~~  355 (361)
T 3m5u_A          288 ADKKDRSLMNVSFNIAKNKDLE-PLFVKEAEEAGMIGLK----GHR---ILGGIRASIYNAL----NLDQVKTLCEFMKE  355 (361)
T ss_dssp             SCGGGBCSSEEEEEESSCTTHH-HHHHHHHHHTTEECCB----CCT---TTCSEEEECCTTS----CHHHHHHHHHHHHH
T ss_pred             CCHHHcCCeEEEEECCCchhhh-HHHHHHHHHCCCEEec----CCC---ccCeEEEEccCCC----CHHHHHHHHHHHHH
Confidence            321  112333444432 2334 4577888999999743    322   1357999987654    48999999999998


Q ss_pred             HHHH
Q 009673          476 GVEI  479 (529)
Q Consensus       476 ~~~~  479 (529)
                      +.+.
T Consensus       356 ~~~~  359 (361)
T 3m5u_A          356 FQGK  359 (361)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8753

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=99.91  E-value=3.3e-23  Score=211.52  Aligned_cols=323  Identities=13%  Similarity=0.102  Sum_probs=207.6

Q ss_pred             ceeEecCC-CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673          104 SLELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF  182 (529)
Q Consensus       104 ~i~L~ase-n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~  182 (529)
                      .|++..+. ..+++.|++++...+.. |..+      |+..+...    .+++++++++| ...   ..+.+++|++|+.
T Consensus         9 ~id~~~~~~~~~~~~v~~a~~~~~~~-~~~~------~~~~~~~~----~l~~~la~~~g-~~~---~v~~~~~gt~a~~   73 (356)
T 1v72_A            9 ALGFSSDNIAGASPEVAQALVKHSSG-QAGP------YGTDELTA----QVKRKFCEIFE-RDV---EVFLVPTGTAANA   73 (356)
T ss_dssp             CCBCSCGGGCCCCHHHHHHHHHTTSS-CCCS------TTCSHHHH----HHHHHHHHHHT-SCC---EEEEESCHHHHHH
T ss_pred             eEeeccCCccCCCHHHHHHHHhhccC-cccc------cccchHHH----HHHHHHHHHhC-CCC---cEEEeCCccHHHH
Confidence            45554432 24689999999876521 2111      32233333    34588899999 321   1245577889999


Q ss_pred             HHHHhhcCCCCEEEEcCCCCCccccccccccccccccc--cceEEEEEcccCCCCCCCCHHHHHH-Hhhhc------CCc
Q 009673          183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT--SIYFESMPYRLDESTGLVDYDMLEK-TAILF------RPK  253 (529)
Q Consensus       183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~--g~~~~~v~~~v~~~~~~iD~d~le~-~i~~~------~pk  253 (529)
                      .++.++++|||+|++.++.|.+.+..+      .+...  |.  +++.++.+  ++.+|+++|++ .+++.      +++
T Consensus        74 ~al~~~~~~gd~vi~~~~~~~~~~~~~------~~~~~~~g~--~~~~v~~~--~~~~d~~~l~~~~i~~~~~~~~~~~~  143 (356)
T 1v72_A           74 LCLSAMTPPWGNIYCHPASHINNDECG------APEFFSNGA--KLMTVDGP--AAKLDIVRLRERTREKVGDVHTTQPA  143 (356)
T ss_dssp             HHHHTSCCTTEEEEECTTSHHHHSSTT------HHHHHTTSC--EEEECCCG--GGCCCHHHHHHHTTSSTTCTTSCEEE
T ss_pred             HHHHHhcCCCCEEEEcCccchhhhhch------HHHHHhCCc--EEEEecCC--CCeEcHHHHHHHhhhcchhhccCCce
Confidence            999999999999999988765433210      02233  54  66666654  47899999999 88752      578


Q ss_pred             EEEEcCCCCCC----CCCHHHHHHHHHHhCCEEEEecccccccc-cccccCCCC---CcccEEEecccccccCCCC-eEE
Q 009673          254 LIIAGASAYPR----DFDYPRMRQIADAVGALLMMDMAHISGLV-AASVVADPF---KYCDVVTTTTHKSLRGPRG-GMI  324 (529)
Q Consensus       254 lIi~~~s~~p~----~~d~~~i~~ia~~~g~~livD~ah~~Gli-~~~~~~~~~---~~aDiv~~S~hK~l~Gprg-G~i  324 (529)
                      +|+++++++.+    ..++++|.++|++||++||+|++|..+.. ..+..+..+   .++|++++|+||+ .+|.| |++
T Consensus       144 ~v~~~~~~~tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~  222 (356)
T 1v72_A          144 CVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIV  222 (356)
T ss_dssp             EEEEESSCTTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEE
T ss_pred             EEEEEcCCCCCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEEE
Confidence            88888765543    23588999999999999999999764321 122222222   1578999999999 55666 688


Q ss_pred             EeeCCCcchhHHHhhhcccc-cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCC
Q 009673          325 FFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGS  402 (529)
Q Consensus       325 ~~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt  402 (529)
                      ++++      ++.+++.... ..+....+.  ..+ ...+++.+....+.+..+++.++++++.+.|++ .|+++..+ .
T Consensus       223 ~~~~------~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~  292 (356)
T 1v72_A          223 LFNT------SLATEMSYRRKRAGHLSSKM--RFL-SAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGG-T  292 (356)
T ss_dssp             ESSG------GGHHHHHHHHHHTTCCCSST--HHH-HHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESC-C
T ss_pred             EECH------HHHhhHHHHhhccCchhhhH--HHH-HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEccC-C
Confidence            8876      4555443211 111111111  122 222344444334566778888899999999988 58887654 2


Q ss_pred             CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          403 DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       403 ~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      ..+++++++.      .++.+.|.++||.+..+    .   +.++.+||+++..    .+++|++++++.|+++++.
T Consensus       293 ~~~~~~~~~~------~~~~~~l~~~gi~v~~g----~---~~~~~iRi~~~~~----~~~~~i~~~~~~l~~~l~~  352 (356)
T 1v72_A          293 EANILFCRLD------SAMIDALLKAGFGFYHD----R---WGPNVVRFVTSFA----TTAEDVDHLLNQVRLAADR  352 (356)
T ss_dssp             CSSEEEEEEC------HHHHHHHHHTTCBCBCS----S---SSTTEEEEECCTT----CCHHHHHHHHHHHHHTC--
T ss_pred             CccEEEEEcC------HHHHHHHHhcCeEEecc----c---cCCCeEEEEecCC----CCHHHHHHHHHHHHHHHHh
Confidence            3456676653      35777778889998543    2   1257899986543    4589999999999887653

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.91  E-value=8.4e-24  Score=216.67  Aligned_cols=330  Identities=12%  Similarity=0.061  Sum_probs=207.8

Q ss_pred             hhcceeEecCCCCC--cHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673          101 QFKSLELIASENFT--SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS  178 (529)
Q Consensus       101 ~~~~i~L~asen~~--~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs  178 (529)
                      +...+.+..++|++  +|.|++++...+...         .|+..+...+++    +++++++|.+.     .+.+++|+
T Consensus        12 ~~~~~~~~~~~~~~g~~p~v~~ai~~~~~~~---------~~~~~~~~~~l~----~~la~~~~~~~-----~i~~~~g~   73 (359)
T 3pj0_A           12 KTPYKLGGNGPRNVGVLTEALQNIDDNLESD---------IYGNGAVIEDFE----TKIAKILGKQS-----AVFFPSGT   73 (359)
T ss_dssp             TCSEESSSSSCCBHHHHHHHTTTSCTTCBCC---------BTTBSHHHHHHH----HHHHHHHTCSE-----EEEESCHH
T ss_pred             hcchhhcCCCccccCCCHHHHHHHHhhcccC---------cccCCHHHHHHH----HHHHHHhCCCc-----EEEeCCHH
Confidence            34566777888886  899999987643211         133334455555    77888999875     24558999


Q ss_pred             HHHHHHHHhhcCCCCE--EEEcCCCCCcccccccccccccc-ccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673          179 PANFEVYTAILKPHDR--IMGLDLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI  255 (529)
Q Consensus       179 ~A~~~~l~all~pGD~--Vl~~~~~~~g~~s~g~~~~~~~i-~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI  255 (529)
                      +|+..++.+++++||+  |++..+.|.......      .+ ...|.  +++.++.  +++.+|+++|++. .+ ++++|
T Consensus        74 ~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~------~~~~~~g~--~~~~v~~--~~~~~d~~~l~~~-~~-~~~~v  141 (359)
T 3pj0_A           74 MAQQIALRIWADRKENRRVAYHPLSHLEIHEQD------GLKELQQI--TPLLLGT--ANQLLTIDDIKSL-RE-PVSSV  141 (359)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTT------HHHHHHCC--EEEECSC--TTSCCCHHHHHTC-SS-CCSEE
T ss_pred             HHHHHHHHHHHhcCCCcEEEEeccceeeehhcc------hHHHhcCc--eEEecCC--cCCCcCHHHHHhc-cC-CceEE
Confidence            9999999999999997  444433322111100      11 22343  6667665  4678999999988 44 89999


Q ss_pred             EEcCCCCCC---CCCHH---HHHHHHHHhCCEEEEeccccccccc-ccccCCCC-CcccEEEecccccccCCCCeEEEee
Q 009673          256 IAGASAYPR---DFDYP---RMRQIADAVGALLMMDMAHISGLVA-ASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFK  327 (529)
Q Consensus       256 i~~~s~~p~---~~d~~---~i~~ia~~~g~~livD~ah~~Gli~-~~~~~~~~-~~aDiv~~S~hK~l~GprgG~i~~~  327 (529)
                      ++++++||+   ..+.+   +|.++|++||++||+|++|..+... .+.....+ .++|+++.|+||++.||.||+++.+
T Consensus       142 ~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~  221 (359)
T 3pj0_A          142 LIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIAGAILAGN  221 (359)
T ss_dssp             EEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSSCEEEEEC
T ss_pred             EEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcceEEEECC
Confidence            998776543   45544   5599999999999999987654321 11111111 2578999999999988877888887


Q ss_pred             CCCcchhHHHhhhccc--ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCC
Q 009673          328 KDPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDN  404 (529)
Q Consensus       328 ~~~~~~~~l~~~i~~~--~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~  404 (529)
                      +      ++.+++...  .+.+..........+++ .+++...     +..+++.++++++.+.|++. |+.+.......
T Consensus       222 ~------~l~~~~~~~~~~~~~~~~~~~~~~~a~~-~~l~~~~-----~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~  289 (359)
T 3pj0_A          222 D------DFVQEAKIWKRRYGGDLISLYPYILSAD-YYFEKRI-----GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVS  289 (359)
T ss_dssp             H------HHHHHHHHHHHHTTCCCSCCHHHHHHHH-HHHHHHG-----GGHHHHHHHHHHHHHHHHTSTTEEEESSSCSS
T ss_pred             H------HHHHHHHHHHHHhCCCcchhHHHHHHHH-HHHHHHH-----HHhHHHHHHHHHHHHHHhhCCCceeeccCCcc
Confidence            7      677666532  11111112222233333 3454332     33456678889999999985 88885322345


Q ss_pred             ceEEEccCCCC-CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          405 HLVLVDLRPMG-IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       405 ~~~~v~~~~~~-i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      +++++++...+ .+..++.+.|.++||.+..+..++.   ...+.+|+++..-. ...+.+++++.++.|.++
T Consensus       290 ~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~---~~~~~~r~~i~~~~-~~~~~e~l~~~l~~l~~~  358 (359)
T 3pj0_A          290 NMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKS---ADVCAFEVSVGDAF-AEIPAKNLELVFRCLEKE  358 (359)
T ss_dssp             SEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEE---TTEEEEEEECCTTG-GGSCHHHHHHHHHHHHHH
T ss_pred             eEEEEEecCccchhHHHHHHHHHhcCcEecCCccccC---CCceEEEEEecCcc-ccCCHHHHHHHHHHHHhc
Confidence            66777765321 2346788889999999965432211   12457898653211 125678888888877654

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=99.91  E-value=2.5e-23  Score=219.13  Aligned_cols=339  Identities=14%  Similarity=0.140  Sum_probs=208.0

Q ss_pred             cceeEecCCC--CCcHHHHHHHhhhhhccCC-CCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673          103 KSLELIASEN--FTSRAVMEAVGSCLTNKYS-EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-  178 (529)
Q Consensus       103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~-~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-  178 (529)
                      +.|+|..++.  .+++.|++++...+..... .|+.  . |+......++++.+.+++.+.++++++    +|.+++|+ 
T Consensus        57 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~--~-y~~~~g~~~l~~~ia~~~~~~~~~~~~----~i~~t~G~~  129 (432)
T 3ei9_A           57 QVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYS--G-YGAEQGAKPLRAAIAKTFYGGLGIGDD----DVFVSDGAK  129 (432)
T ss_dssp             CCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCC--C-CCCTTCCHHHHHHHHHHHHTTTTCCGG----GEEEESCHH
T ss_pred             CeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCcc--C-CCCCCCCHHHHHHHHHHHHccCCCCcc----eEEECCChH
Confidence            4688877765  3689999999887753111 1111  1 222223356665555666554566654    45567777 


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc----------eEEEEEcccCCC-CCCCCHHHHHHHh
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI----------YFESMPYRLDES-TGLVDYDMLEKTA  247 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~----------~~~~v~~~v~~~-~~~iD~d~le~~i  247 (529)
                      +++. ++.++++|||+|++.+|.|.++...        +...|.          +.+++.++++.+ ++..|+++     
T Consensus       130 ~al~-~l~~l~~~gd~Vl~~~p~y~~~~~~--------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----  195 (432)
T 3ei9_A          130 CDIS-RLQVMFGSNVTIAVQDPSYPAYVDS--------SVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----  195 (432)
T ss_dssp             HHHH-HHHHHHCTTCCEEEEESCCTHHHHH--------HHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----
T ss_pred             HHHH-HHHHHcCCCCEEEEeCCCCHHHHHH--------HHHcCCcccccccccccCceEEeccCcccCCcCChhh-----
Confidence            6665 4688899999999999988765321        111121          013445555432 34555432     


Q ss_pred             hhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCC--CC---cccEEEecccccc-
Q 009673          248 ILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FK---YCDVVTTTTHKSL-  316 (529)
Q Consensus       248 ~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~--~~---~aDiv~~S~hK~l-  316 (529)
                      . .++++|++++++||+  ..   ++++|+++|++||++||+|++|..+ +..+.....  +.   ..+++++|+||++ 
T Consensus       196 ~-~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g  273 (432)
T 3ei9_A          196 V-GRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMY-MSDDNPRSIFEIPGAEEVAMETASFSNYAG  273 (432)
T ss_dssp             C-CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGG-CCSSCCSSGGGSTTGGGTEEEEEESHHHHC
T ss_pred             C-CCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhh-ccCCCCCChhhcCCCCCeEEEEecchhccC
Confidence            2 378999998899987  44   4677888899999999999997643 322211111  11   3458999999987 


Q ss_pred             -cCCCCeEEEeeCCCc--chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc
Q 009673          317 -RGPRGGMIFFKKDPV--LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL  393 (529)
Q Consensus       317 -~GprgG~i~~~~~~~--~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~  393 (529)
                       +|+|.|+++++++..  ....+.+.+........ ++++....++...++........++..+++.++++.+.+.|.+.
T Consensus       274 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  352 (432)
T 3ei9_A          274 FTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCF-NGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL  352 (432)
T ss_dssp             TTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSC-CCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CcccceEEEEEChHHhhcchHHHHHHHHHHhcccc-CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence             788889999988420  00001333332211111 22333333333334432111345778888999999999999988


Q ss_pred             CcEEecCCCCCceEEEccCCCCCcHHHH-HHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673          394 GYKLVSGGSDNHLVLVDLRPMGIDGARV-EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF  472 (529)
Q Consensus       394 G~~v~~~gt~~~~~~v~~~~~~i~~~~~-~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~  472 (529)
                      |+.+..+ ..++++|+++.  +.+..++ ..+++++||.+..+..++   +..++++||++.      .+++++++.++.
T Consensus       353 g~~~~~~-~~~~~~~~~~~--~~~~~~~~~~ll~~~gv~v~~g~~f~---~~~~~~iRis~~------~~~e~l~~~l~r  420 (432)
T 3ei9_A          353 GYDVYGG-KNAPYVWVHFP--NQSSWDVFAEILEKTHVVTTPGSGFG---PGGEGFVRVSAF------GHRENILEACRR  420 (432)
T ss_dssp             TCCEEEC-SSSSEEEEECT--TSCHHHHHHHHHHHHCEECEEGGGGC---GGGTTEEEEECC------SCHHHHHHHHHH
T ss_pred             CceecCC-CcceEEEEECC--CCCHHHHHHHHHHHCCEEEeCchHhC---CCCCCEEEEEec------CCHHHHHHHHHH
Confidence            9887754 23566788886  4455554 555677899986543332   224678999952      358898888888


Q ss_pred             HHHHH
Q 009673          473 IHEGV  477 (529)
Q Consensus       473 i~~~~  477 (529)
                      |++-.
T Consensus       421 l~~~~  425 (432)
T 3ei9_A          421 FKQLY  425 (432)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            87543

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=99.91  E-value=2.9e-23  Score=218.44  Aligned_cols=335  Identities=14%  Similarity=0.097  Sum_probs=218.5

Q ss_pred             hcceeEecCCC-C--CcHHH--HHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc-CCCCCCCceeeecC
Q 009673          102 FKSLELIASEN-F--TSRAV--MEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF-NLDENKWGVNVQPL  175 (529)
Q Consensus       102 ~~~i~L~asen-~--~~~~V--~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~-g~~~~~~~~~V~~~  175 (529)
                      .+.|+|..+++ .  .++.+  ++++...+......+|+.      .....++++...+++.+.+ +++++++ ..|.++
T Consensus        47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~------~~g~~~lr~~ia~~~~~~~~~~~~~~~-~~i~~t  119 (430)
T 2x5f_A           47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAP------PQGIEELRDLWQQKMLRDNPELSIDNM-SRPIVT  119 (430)
T ss_dssp             TCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCC------TTCCHHHHHHHHHHHHHHCTTCCGGGB-CCCEEE
T ss_pred             CCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCC------CCCCHHHHHHHHHHHhccCcccCCCcc-ceEEEc
Confidence            45688887776 3  35656  777766553211123332      1112455544444444432 5555421 014556


Q ss_pred             ChH-HHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccc-ccceEEEEEcccCCCCCCCCHHHHHHHhhhc--C
Q 009673          176 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSG-TSIYFESMPYRLDESTGLVDYDMLEKTAILF--R  251 (529)
Q Consensus       176 sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~-~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~--~  251 (529)
                      +|+ +|+..++.++++|||+|++++|.|.++..        .+.. .|.  +++.++++++++.+|+++|++.+++.  +
T Consensus       120 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  189 (430)
T 2x5f_A          120 NALTHGLSLVGDLFVNQDDTILLPEHNWGNYKL--------VFNTRNGA--NLQTYPIFDKDGHYTTDSLVEALQSYNKD  189 (430)
T ss_dssp             SHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHH--------HHTTTTCC--EEEEECCBCTTSCBCSHHHHHHHHHCCSS
T ss_pred             CCchHHHHHHHHHHhCCCCEEEEcCCcCccHHH--------HHHHhcCC--eEEEEeccCccCCcCHHHHHHHHHhcCCC
Confidence            665 99999999999999999999998765431        2233 454  66677776434689999999999763  6


Q ss_pred             CcEEEEcCCCCCC--CCC---HHHHHHHHHH-----hCCEEEEecccccccccccc-cCC---CC---Ccc---cEEEec
Q 009673          252 PKLIIAGASAYPR--DFD---YPRMRQIADA-----VGALLMMDMAHISGLVAASV-VAD---PF---KYC---DVVTTT  311 (529)
Q Consensus       252 pklIi~~~s~~p~--~~d---~~~i~~ia~~-----~g~~livD~ah~~Gli~~~~-~~~---~~---~~a---Div~~S  311 (529)
                      +++|+++.|+||+  ..+   +++|.++|++     +|+++|+|++|.. +...+. ...   .+   ...   +++++|
T Consensus       190 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s  268 (430)
T 2x5f_A          190 KVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYG-LFYEDVYTQSLFTALTNLHSNAILPIRLDG  268 (430)
T ss_dssp             EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTT-CBCSSSCCSCHHHHHHTTCCTTEEEEEEEE
T ss_pred             CEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhccc-ccCCcccchHHHHHHhhccCCcceEEEEEe
Confidence            7888888889886  556   8899999999     9999999999653 332221 111   11   123   578899


Q ss_pred             ccccc--cCCCCeEEEe---eCCCcchhHHHhhhcccccC----CCCCCChHHHHHHHHHHHH-Hhc-CchHHHHHHHHH
Q 009673          312 THKSL--RGPRGGMIFF---KKDPVLGVELESAINNAVFP----GLQGGPHNHTIGGLAVCLK-HAQ-SPEFKVYQNKVV  380 (529)
Q Consensus       312 ~hK~l--~GprgG~i~~---~~~~~~~~~l~~~i~~~~~p----~~~g~p~~~~iaala~al~-~~~-~~~~~~~~~~i~  380 (529)
                      +||++  +|.|.|++++   ++      ++.+.+......    .. .+++....+++..+|+ ... .....+..+++.
T Consensus       269 ~sK~~~~~G~riG~~~~~~~~~------~~~~~l~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  341 (430)
T 2x5f_A          269 ATKEFFAWGFRVGFMTFGTSDQ------TTKEVLEAKVKGLIRSNI-SSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLK  341 (430)
T ss_dssp             HHHHTTCGGGCCEEEEEBCCCH------HHHHHHHHHHHHHHHTTT-SSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred             cccCCCCCCCCeEEEEEecCCH------HHHHHHHHHHhhhhhccc-CCCChHHHHHHHHHHccChHHHHHHHHHHHHHH
Confidence            99997  6778899999   66      666665432211    22 2334444444445565 310 011233778888


Q ss_pred             HHHHHHHHHHH----hcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhc-CCeEEcCCCCCCCCCCCCCCeEEEccCC
Q 009673          381 SNCRALASRLV----ELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPA  455 (529)
Q Consensus       381 ~~a~~l~~~L~----~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~-~GI~v~~~~~Pg~~~~~~~~~iRig~~~  455 (529)
                      ++++.+.+.|+    +.|+.+..+. .+.++++++.  +.+..++.+.|.+ +||.+.    ||     .++++||++..
T Consensus       342 ~~~~~l~~~L~~~~~~~g~~~~~~~-~g~~~~~~~~--~~~~~~~~~~l~~~~gi~v~----~g-----~~~~iRis~~~  409 (430)
T 2x5f_A          342 ERYEVTKEVVYADQYHSHWQAYDFN-SGYFMAIKVH--DVDPEALRKHLIDKYSIGVI----AL-----NATDIRIAFSC  409 (430)
T ss_dssp             HHHHHHHHHHTCGGGTTTEEECCCC-BSSEEEEEES--SSCHHHHHHHHHHHHCEECE----EC-----SSSEEEEEGGG
T ss_pred             HHHHHHHHHHHhhCCCCCceeeCCC-ceEEEEeCCC--CCCHHHHHHHHHHhCCEEEe----cC-----CCCeEEEEEec
Confidence            88999999998    5678776542 2455777775  5577777777766 999984    33     25789999763


Q ss_pred             CccCCCCHHHHHHHHHHHHHHHH
Q 009673          456 MTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       456 ~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                           .++++++++++.|+++++
T Consensus       410 -----~~~e~i~~~~~~l~~~l~  427 (430)
T 2x5f_A          410 -----VEKDDIPHVFDSIAKAID  427 (430)
T ss_dssp             -----SCGGGHHHHHHHHHHHHH
T ss_pred             -----CCHHHHHHHHHHHHHHHH
Confidence                 247899999999998875

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=99.91  E-value=9.1e-23  Score=209.56  Aligned_cols=276  Identities=16%  Similarity=0.126  Sum_probs=189.2

Q ss_pred             HHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCC-CEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673          154 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL  231 (529)
Q Consensus       154 ~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v  231 (529)
                      ++.+++++|++++    +|.+++|+ +++..++.++++|| |+|++++|.|.++..        .+...|.  +++.+++
T Consensus        64 r~~la~~~~~~~~----~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~  129 (356)
T 1fg7_A           64 IENYAQYAGVKPE----QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSV--------SAETIGV--ECRTVPT  129 (356)
T ss_dssp             HHHHHHHHTSCGG----GEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHH--------HHHHHTC--EEEECCC
T ss_pred             HHHHHHHhCCChH----HEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHH--------HHHHcCC--EEEEeeC
Confidence            3677888898864    45567776 99999999999999 999999988765421        2233454  6677777


Q ss_pred             CCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHH---HHHHHhCCEEEEecccccccccccccCCCCC--c
Q 009673          232 DESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMR---QIADAVGALLMMDMAHISGLVAASVVADPFK--Y  304 (529)
Q Consensus       232 ~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~---~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~  304 (529)
                      + +++.+|++++++.++  ++++|++++++||+  ..+.+++.   ++|+ +|+++|+|++|....-...... ..+  .
T Consensus       130 ~-~~~~~d~~~l~~~i~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~-~~~~~~  204 (356)
T 1fg7_A          130 L-DNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAG-WLAEYP  204 (356)
T ss_dssp             C-TTSCCCHHHHHTSCT--TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGG-GTTTCT
T ss_pred             C-CCCCCCHHHHHHHhc--CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHH-HHhhCC
Confidence            6 457899999999886  78999999899886  56655554   5555 8999999999763321111111 011  3


Q ss_pred             ccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 009673          305 CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN  382 (529)
Q Consensus       305 aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~  382 (529)
                      .++++.|+||++  +|+|.|++++++      ++.+.+.....+.  + ++....++...+|+......+++..+++.++
T Consensus       205 ~~i~~~s~sK~~g~~G~r~G~~~~~~------~~~~~l~~~~~~~--~-~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  275 (356)
T 1fg7_A          205 HLAILRTLSKAFALAGLRCGFTLANE------EVINLLMKVIAPY--P-LSTPVADIAAQALSPQGIVAMRERVAQIIAE  275 (356)
T ss_dssp             TEEEEEESSSTTCCGGGCCEEEEECH------HHHHHHHHHSCSS--C-SCHHHHHHHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEecchHhhcCchhhhEEEEeCH------HHHHHHHHhcCCC--C-CCHHHHHHHHHHhcCccHHHHHHHHHHHHHH
Confidence            568999999987  688899999977      6777766543332  2 2333333333344331101156777888899


Q ss_pred             HHHHHHHHHhcC--cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcC-CCCCCCCCCCCCCeEEEccCCCccC
Q 009673          383 CRALASRLVELG--YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNK-NSVPGDKSALVPGGIRIGSPAMTTR  459 (529)
Q Consensus       383 a~~l~~~L~~~G--~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~-~~~Pg~~~~~~~~~iRig~~~~tt~  459 (529)
                      ++++.+.|++.|  +.+..+  ..+++++++.    +..++.+.|.++||.+.. +..+|     .++++||++.     
T Consensus       276 ~~~l~~~L~~~~~~~~~~~~--~~~~~~~~~~----~~~~l~~~L~~~gI~v~~~g~~~~-----~~~~iRis~~-----  339 (356)
T 1fg7_A          276 REYLIAALKEIPCVEQVFDS--ETNYILARFK----ASSAVFKSLWDQGIILRDQNKQPS-----LSGCLRITVG-----  339 (356)
T ss_dssp             HHHHHHHHHHSTTEEEECCC--SSSEEEEEET----THHHHHHHHHHTTEECEECTTSTT-----CTTEEEEECC-----
T ss_pred             HHHHHHHHHhCCCceEECCC--CCeEEEEECC----CHHHHHHHHHHCCEEEEECCCCCC-----CCCeEEEEeC-----
Confidence            999999999865  333332  3456677764    567788888899999965 32222     2468999964     


Q ss_pred             CCCHHHHHHHHHHHHH
Q 009673          460 GFSEKEFVAIADFIHE  475 (529)
Q Consensus       460 g~~~~d~~~la~~i~~  475 (529)
                        +++|++++++.|++
T Consensus       340 --~~~e~~~~~~~l~~  353 (356)
T 1fg7_A          340 --TREESQRVIDALRA  353 (356)
T ss_dssp             --CHHHHHHHHHHHHT
T ss_pred             --CHHHHHHHHHHHHh
Confidence              37899999988865

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.91  E-value=1.6e-24  Score=224.87  Aligned_cols=334  Identities=13%  Similarity=0.060  Sum_probs=211.1

Q ss_pred             ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCC-CCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeee-cCChHHHH
Q 009673          104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQ-PLSGSPAN  181 (529)
Q Consensus       104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~-~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~-~~sGs~A~  181 (529)
                      ...+.++..++|++|+++|...+.+.+..|... .-+..+.++.+.++ .+++.+++++|++.+.  -.+. ..+||+++
T Consensus        28 ~yl~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~-~ar~~la~ll~~~~~~--evif~t~~~T~a~  104 (386)
T 3qm2_A           28 VFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAE-EAEQDFRDLLNIPSNY--KVLFCHGGGRGQF  104 (386)
T ss_dssp             CEECCSSSCCCCHHHHHHHTCC-----------------------CCH-HHHHHHHHHHTCCTTE--EEEEEESCTTHHH
T ss_pred             CccccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHH-HHHHHHHHHhCCCCCc--eEEEEcCCchHHH
Confidence            456678888999999999998876544322110 01122344444555 5789999999996421  1133 35677999


Q ss_pred             HHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC-CCCCC-CCHHHHHHHhhhcCCcEEEEcC
Q 009673          182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGL-VDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       182 ~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~-~~~~~-iD~d~le~~i~~~~pklIi~~~  259 (529)
                      .+++.+++++||+|++....+   ++|.+..   .....| .+..  ++++ ++.+. +|++++++.+++ ++++|.+.+
T Consensus       105 n~ai~~l~~~gd~v~~~~~~~---~~~~~~~---~a~~~G-~v~~--v~~~~~~~G~~~~~~~~~~~l~~-~t~lV~~~h  174 (386)
T 3qm2_A          105 AGVPLNLLGDKTTADYVDAGY---WAASAIK---EAKKYC-APQI--IDAKITVDGKRAVKPMREWQLSD-NAAYLHYCP  174 (386)
T ss_dssp             HHHHHHHCTTCCEEEEEESSH---HHHHHHH---HHTTTS-EEEE--EECEEEETTEEEECCGGGCCCCT-TCSCEEECS
T ss_pred             HHHHHhccCCCCeEEEEeCCH---HHHHHHH---HHHHhC-CeEE--EecCcccCCCCCCchHHHhhcCC-CCcEEEEEC
Confidence            999999999999988765433   3332211   112234 3344  3443 11343 778888888876 899988875


Q ss_pred             CCC--CCC-CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhH
Q 009673          260 SAY--PRD-FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVE  335 (529)
Q Consensus       260 s~~--p~~-~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~  335 (529)
                      ..+  +.. .|+++|.     +|+++++|++|+.|.++.++.     ..|++++|.||++ ||.| |+++++++      
T Consensus       175 ~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~-----~~~~~~~s~hK~l-GP~G~g~l~v~~~------  237 (386)
T 3qm2_A          175 NETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDVS-----RYGVIYAGAQKNI-GPAGLTLVIVRED------  237 (386)
T ss_dssp             EETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCGG-----GCSEEEEETTTTT-CCTTEEEEEEEGG------
T ss_pred             CcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCcc-----ccCEEEEeccccc-CCCccEEEEECHH------
Confidence            544  454 7888875     799999999999887654432     2357889999999 8999 99999984      


Q ss_pred             HHhhhccc-----------ccCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcCcEEe-cC-C
Q 009673          336 LESAINNA-----------VFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELGYKLV-SG-G  401 (529)
Q Consensus       336 l~~~i~~~-----------~~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G~~v~-~~-g  401 (529)
                      +.+++...           ......++|+...++++..|++.+... ++++..++..+.++++.+.|.+.|+... .+ .
T Consensus       238 ~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~  317 (386)
T 3qm2_A          238 LLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQA  317 (386)
T ss_dssp             GCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGG
T ss_pred             HHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHH
Confidence            22111100           011124688888999999999988766 6788889999999999999988776322 11 1


Q ss_pred             -CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          402 -SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       402 -t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                       .....+.+.+...+++ ..+...|+++||.+..    |+.   ..+++|+|+...+    +++|+++++++|+++.+.
T Consensus       318 ~rs~~iv~f~~~~~~~~-~~~~~~L~~~gI~~~~----g~~---~~~~iRiS~~~~~----t~edId~l~~~l~~~~~~  384 (386)
T 3qm2_A          318 NRSRMNVPFQLADNTLD-KVFLEESFAAGLHALK----GHR---VVGGMRASIYNAM----PIEGVKALTDFMIDFERR  384 (386)
T ss_dssp             GBCSSEEEEEESSGGGH-HHHHHHHHHTTEECCB----CCT---TTCSEEEECCTTS----CHHHHHHHHHHHHHHHHH
T ss_pred             HcCceEEEEECCCcccc-HHHHHHHHHCCCEEeC----CCC---CcCeEEEEcCCCC----CHHHHHHHHHHHHHHHHh
Confidence             1122344445432344 4566668899999743    322   1356999986554    489999999999987653

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.91  E-value=8.4e-24  Score=216.59  Aligned_cols=326  Identities=12%  Similarity=0.084  Sum_probs=213.1

Q ss_pred             ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCC----CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC-h-
Q 009673          104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG----GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-G-  177 (529)
Q Consensus       104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~----g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s-G-  177 (529)
                      .+++.+++..+|+.|++++...+.+ +.  .++...|.    ... ..++.+.+++++++++|++..+   +|.+++ + 
T Consensus         4 ~~~~~~g~~~~p~~v~~a~~~~~~~-~~--~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~g~~~~~---~v~~~~g~g   76 (360)
T 1w23_A            4 VFNFNAGPSALPKPALERAQKELLN-FN--DTQMSVMELSHRSQS-YEEVHEQAQNLLRELLQIPNDY---QILFLQGGA   76 (360)
T ss_dssp             CEECCSSSCCCCHHHHHHHHHTSSS-ST--TSSSCGGGSCTTSHH-HHHHHHHHHHHHHHHHTCCTTE---EEEEESSHH
T ss_pred             eEeecCCCcCCCHHHHHHHHHHhhh-hc--cccccccccCCCCHH-HHHHHHHHHHHHHHHhCCCCCc---eEEEECCcc
Confidence            4677788888999999999987743 21  11111111    112 2233334668999999997321   333444 3 


Q ss_pred             HHHHHHHHHhhcCC---CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHH-HhhhcCCc
Q 009673          178 SPANFEVYTAILKP---HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEK-TAILFRPK  253 (529)
Q Consensus       178 s~A~~~~l~all~p---GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~-~i~~~~pk  253 (529)
                      ++|+.+++.+++.+   ||.|+++.+.|..     .    ..+...|   +++.++++++++.+|++++++ .+++ ++|
T Consensus        77 t~al~~~~~~l~~~~~~g~~vi~~~~~~~~-----~----~~~~~~g---~~~~v~~~~~~~~~d~~~l~~~~i~~-~~k  143 (360)
T 1w23_A           77 SLQFTMLPMNLLTKGTIGNYVLTGSWSEKA-----L----KEAKLLG---ETHIAASTKANSYQSIPDFSEFQLNE-NDA  143 (360)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEEECSHHHHHH-----H----HHHHTTS---EEEEEEECGGGTSCSCCCGGGCCCCT-TEE
T ss_pred             hHHHHHHHHHhcCCCCcccEEEecchhHHH-----H----HHHHHhC---CeEEeecccccCcCCccchHhhccCC-CCC
Confidence            68999999999866   5556654432211     0    0122334   455666664355689999988 8866 899


Q ss_pred             EEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCC
Q 009673          254 LIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDP  330 (529)
Q Consensus       254 lIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~  330 (529)
                      +|++++++||+  ..+     +|+++||++||+|++|..|....     ++...|++++|+||+++ |.| |++++++  
T Consensus       144 ~v~~~~~~nptG~~~~-----~i~~~~~~~li~D~a~~~~~~~~-----~~~~~di~~~s~sK~~~-~~G~G~~~~~~--  210 (360)
T 1w23_A          144 YLHITSNNTIYGTQYQ-----NFPEINHAPLIADMSSDILSRPL-----KVNQFGMIYAGAQKNLG-PSGVTVVIVKK--  210 (360)
T ss_dssp             EEEEESEETTTTEECS-----SCCCCCSSCEEEECTTTTTSSCC-----CGGGCSEEEEETTTTTS-CTTCEEEEEEH--
T ss_pred             EEEEeCCCCCcceecc-----cccccCCceEEEechhhcCCCCc-----CcccCCEEEEEcccccC-CCCcEEEEEcH--
Confidence            99998887776  444     33348999999999987764321     22223899999999884 666 9999987  


Q ss_pred             cchhHHHhhhcccc-----------cCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcC-c-E
Q 009673          331 VLGVELESAINNAV-----------FPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG-Y-K  396 (529)
Q Consensus       331 ~~~~~l~~~i~~~~-----------~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G-~-~  396 (529)
                          ++.+++....           .....++++...++++..+++.+... ++++..+++.++++++.+.|++.+ + .
T Consensus       211 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~  286 (360)
T 1w23_A          211 ----DLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYV  286 (360)
T ss_dssp             ----HHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSE
T ss_pred             ----HHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCccc
Confidence                5655554321           01223567777777777777765433 467888999999999999998865 5 5


Q ss_pred             Eec-CC-CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673          397 LVS-GG-SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH  474 (529)
Q Consensus       397 v~~-~g-t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~  474 (529)
                      +.. +. ..++++++++.. +.+..++.+.|.+.||.+.    ||..   .+++|||++...+    +++|++++++.|+
T Consensus       287 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~~~----~~~~---~~~~iRis~~~~~----~~~~i~~~~~~l~  354 (360)
T 1w23_A          287 GHAEKGSRSLMNVTFNLRN-EELNQQFLAKAKEQGFVGL----NGHR---SVGGCRASIYNAV----PIDACIALRELMI  354 (360)
T ss_dssp             ESSCGGGBCSSEEEEECSS-HHHHHHHHHHHHHTTEESC----BCCT---TTCSEEEECCTTS----CHHHHHHHHHHHH
T ss_pred             ccCCchhccCcEEEEEcCC-CccHHHHHHHHHHCCeeee----cCCC---CCCeEEEEecCCC----CHHHHHHHHHHHH
Confidence            431 21 123466776642 2234556677888999983    4432   2578999986543    5899999999998


Q ss_pred             HHHH
Q 009673          475 EGVE  478 (529)
Q Consensus       475 ~~~~  478 (529)
                      ++++
T Consensus       355 ~~~~  358 (360)
T 1w23_A          355 QFKE  358 (360)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8765

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=99.91  E-value=1e-22  Score=209.46  Aligned_cols=318  Identities=14%  Similarity=0.069  Sum_probs=207.9

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      ..|+|..+++.  +++.+++++...+..  ..+|+.       ....+++    +.+++++|++++    +|.+++|+ +
T Consensus        25 ~~idl~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~-------~~~~~l~----~~la~~~~~~~~----~v~~~~g~~~   87 (364)
T 1lc5_A           25 QLLDFSANINPLGMPVSVKRALIDNLDC--IERYPD-------ADYFHLH----QALARHHQVPAS----WILAGNGETE   87 (364)
T ss_dssp             GSEECSSCCCTTCCCHHHHHHHHHTGGG--GGSCCC-------TTCHHHH----HHHHHHHTSCGG----GEEEESSHHH
T ss_pred             ceEEeccccCCCCCCHHHHHHHHHHHHH--hhcCCC-------CCHHHHH----HHHHHHHCcCHH----HEEECCCHHH
Confidence            46888877764  689999999877643  123322       1123444    677888898764    34446654 9


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      ++..++.++  +||+|++.+|.|.++..        .+...|.  +++.++++++ ++.+ ++++.+.+++ ++++|+++
T Consensus        88 al~~~~~~~--~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~-l~~~~~~~~~-~~~~v~i~  153 (364)
T 1lc5_A           88 SIFTVASGL--KPRRAMIVTPGFAEYGR--------ALAQSGC--EIRRWSLREADGWQL-TDAILEALTP-DLDCLFLC  153 (364)
T ss_dssp             HHHHHHHHH--CCSEEEEEESCCTHHHH--------HHHHTTC--EEEEEECCGGGTTCC-CTTHHHHCCT-TCCEEEEE
T ss_pred             HHHHHHHHc--CCCeEEEeCCCcHHHHH--------HHHHcCC--eEEEEeCCcccccch-hHHHHHhccC-CCCEEEEe
Confidence            999888888  78999999988765421        2233454  5666666532 2333 4656556654 78998888


Q ss_pred             CCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC-CC--cccEEEecccccc--cCCCCeEEE-ee
Q 009673          259 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP-FK--YCDVVTTTTHKSL--RGPRGGMIF-FK  327 (529)
Q Consensus       259 ~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~-~~--~aDiv~~S~hK~l--~GprgG~i~-~~  327 (529)
                      .++||+  ..+   +++|.++|+++|+++|+|++|..+. ..+..... ++  ..+++++|+||++  +|.|.|+++ .+
T Consensus       154 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  232 (364)
T 1lc5_A          154 TPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFI-PHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD  232 (364)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGS-TTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCC
T ss_pred             CCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhc-cCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECC
Confidence            888886  556   8999999999999999999975432 21111011 11  4678999999997  577889999 77


Q ss_pred             CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCce
Q 009673          328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHL  406 (529)
Q Consensus       328 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~  406 (529)
                      +      ++.+.+.....++   +++....+++..+++.  ...+++..+++.++++.+.+.|++. |+.+..+  ...+
T Consensus       233 ~------~~~~~l~~~~~~~---~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~g~~  299 (364)
T 1lc5_A          233 D------AAMARMRRQQMPW---SVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLTVYPG--RANY  299 (364)
T ss_dssp             H------HHHHHHHHHSCTT---CSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCC--SSSE
T ss_pred             H------HHHHHHHHhCCCC---CCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHhcCCCCEECCC--CCeE
Confidence            6      6777665443221   2333344444334432  1234677788888999999999885 8887643  2445


Q ss_pred             EEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          407 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       407 ~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +++++..   +..++.+.|.++||.+..+...   +...++++||++.       +++|++++.+.|+++++
T Consensus       300 ~~~~~~~---~~~~l~~~l~~~gi~v~~g~~~---~~~~~~~iRis~~-------~~~~~~~l~~~l~~~~~  358 (364)
T 1lc5_A          300 LLLRCER---EDIDLQRRLLTQRILIRSCANY---PGLDSRYYRVAIR-------SAAQNERLLAALRNVLT  358 (364)
T ss_dssp             EEEEESC---TTCCHHHHHHTTTEECEECTTS---TTCCTTEEEEECC-------CHHHHHHHHHHHHHHC-
T ss_pred             EEEECCC---cHHHHHHHHHHCCcEEeeCccc---CCCCCCEEEEEeC-------CHHHHHHHHHHHHHHhh
Confidence            6666642   2335667777889998543211   1123578999953       37899999999988765

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.91  E-value=1.6e-22  Score=210.10  Aligned_cols=316  Identities=16%  Similarity=0.157  Sum_probs=210.4

Q ss_pred             cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh
Q 009673          109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI  188 (529)
Q Consensus       109 asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al  188 (529)
                      .+...+++++++++...+.+.+        |+ ..+...+++    +.+++++|.+.     .|.+++|++|+..++.++
T Consensus         8 ~~~~~~~~~~~~a~~~~~~~~~--------~~-~~~~~~~l~----~~la~~~~~~~-----~i~~~sGt~a~~~al~~~   69 (390)
T 3b8x_A            8 LASSTWDDLEYKAIQSVLDSKM--------FT-MGEYVKQYE----TQFAKTFGSKY-----AVMVSSGSTANLLMIAAL   69 (390)
T ss_dssp             SCCCCCCHHHHHHHHHHHHHTC--------CS-SCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHT
T ss_pred             CCCCCCCHHHHHHHHHHHHcCC--------CC-CChHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHHHH
Confidence            3566789999999988875421        11 234445555    67888999873     466799999999999998


Q ss_pred             -------cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC-C
Q 009673          189 -------LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA-S  260 (529)
Q Consensus       189 -------l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~-s  260 (529)
                             ++|||+|++++++|.+...        .+...|.  +++.++++++++.+|+++|++.+++ ++++|++++ +
T Consensus        70 ~~~~~~~~~~g~~Vi~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~  138 (390)
T 3b8x_A           70 FFTKKPRLKKGDEIIVPAVSWSTTYY--------PLQQYGL--RVKFVDIDINTLNIDIESLKEAVTD-STKAILTVNLL  138 (390)
T ss_dssp             TSSSSCSCCTTCEEEEESSSCHHHHH--------HHHHTTC--EEEEECBCTTTCSBCHHHHHHHCCT-TEEEEEEECGG
T ss_pred             HhhhhcCCCCcCEEEECCCCcHHHHH--------HHHHcCC--EEEEEecCccccCcCHHHHHHHhCc-CCeEEEEECCc
Confidence                   8899999999998765432        2334454  7777888766689999999999987 889888863 3


Q ss_pred             CCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecc--cccccCCCCeEEEeeCCCcchhHHHh
Q 009673          261 AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTT--HKSLRGPRGGMIFFKKDPVLGVELES  338 (529)
Q Consensus       261 ~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~--hK~l~GprgG~i~~~~~~~~~~~l~~  338 (529)
                      ++  ..|+++|.++|+++|+++|+|++|+.|....+ ..... ..|+.++|+  +|.+.+++||+++++++     ++.+
T Consensus       139 g~--~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~g~-~~~~~~~s~~~~k~~~~g~gG~~~~~~~-----~l~~  209 (390)
T 3b8x_A          139 GN--PNNFDEINKIIGGRDIILLEDNCESMGATFNN-KCAGT-FGLMGTFSSFYSNHIATMEGGCIVTDDE-----EIYH  209 (390)
T ss_dssp             GC--CCCHHHHHHHHTTSCCEEEEECTTCTTCEETT-EETTS-SSSEEEEECCTTSSSCSSSCEEEEESCH-----HHHH
T ss_pred             cC--hhhHHHHHHHHHHcCCEEEEECcCcccCEECC-ccccc-ccceEEEEccCCCCCccCCceEEEeCCH-----HHHH
Confidence            33  58999999999999999999999988876522 11110 235555443  45566678899999873     3433


Q ss_pred             hhccccc------------------------------CCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 009673          339 AINNAVF------------------------------PGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA  387 (529)
Q Consensus       339 ~i~~~~~------------------------------p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~  387 (529)
                      ++.....                              .+. .+++.....++++ +++     .+++..++..++++++.
T Consensus       210 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~-~l~-----~l~~~~~~~~~~~~~l~  283 (390)
T 3b8x_A          210 ILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIE-QLK-----KLPRFISVRRKNAEYFL  283 (390)
T ss_dssp             HHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHH-HHH-----HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHH-HHH-----HHHHHHHHHHHHHHHHH
Confidence            3221100                              010 1133444444333 232     34567788888999999


Q ss_pred             HHHHhc-CcEEecCCCC-C-ceEEEccCC-CCCcHHHHHHhHhcCCeEEcCCCCCCCC--C-CC-C--------------
Q 009673          388 SRLVEL-GYKLVSGGSD-N-HLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDK--S-AL-V--------------  445 (529)
Q Consensus       388 ~~L~~~-G~~v~~~gt~-~-~~~~v~~~~-~~i~~~~~~~~L~~~GI~v~~~~~Pg~~--~-~~-~--------------  445 (529)
                      +.|.+. |+.+..+... + +.+.+.+.. .+.+.+++.+.|.+.||.++.. .|+..  . +. .              
T Consensus       284 ~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (390)
T 3b8x_A          284 DKFKDHPYLDVQQETGESSWFGFSFIIKKDSGVIRKQLVENLNSAGIECRPI-VTGNFLKNTDVLKYFDYTVHNNVDNAE  362 (390)
T ss_dssp             HHHTTCSSEEECCCCSBCCCCEEEEEECTTSCCCHHHHHHHHHHTTBCCBCS-TTSSGGGCHHHHTTCEEEESSCCHHHH
T ss_pred             HHhcCCCCcccCCCCCCcccEEEEEEecCcCcccHHHHHHHHHHCCCCeeee-cCCchhhcchhhhcCCCCCcCCChHHH
Confidence            999874 7877643211 2 224444432 1457788999999999998753 22211  1 10 0              


Q ss_pred             ---CCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673          446 ---PGGIRIGSPAMTTRGFSEKEFVAIADFI  473 (529)
Q Consensus       446 ---~~~iRig~~~~tt~g~~~~d~~~la~~i  473 (529)
                         .+.|||++...    ++++|++++++.|
T Consensus       363 ~~~~~~l~l~~~~~----~t~~di~~i~~~l  389 (390)
T 3b8x_A          363 YLDKNGLFVGNHQI----ELFDEIDYLREVL  389 (390)
T ss_dssp             HHHHHEEEEECCSS----CCHHHHHHHHHHT
T ss_pred             HHhcCEEEeeCCCC----CCHHHHHHHHHhh
Confidence               13599987654    5699999999876

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=99.90  E-value=7.4e-23  Score=220.00  Aligned_cols=333  Identities=11%  Similarity=0.006  Sum_probs=212.1

Q ss_pred             CCCCcHHHHHHHhhhhhccC---CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC-CCCCCCceeeecCChH-HHHHHHH
Q 009673          111 ENFTSRAVMEAVGSCLTNKY---SEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGS-PANFEVY  185 (529)
Q Consensus       111 en~~~~~V~eal~~~l~~~y---~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g-~~~~~~~~~V~~~sGs-~A~~~~l  185 (529)
                      .+..|..+.+++...+....   ..+|+.      .....++++.+.+++.+.+| ++.+.  .+|.+++|+ +|+..++
T Consensus        99 ~~~~P~~~~~~~~~~l~~~~~~~~~~Y~~------~~G~~~lr~~ia~~~~~~~gG~~~~~--~~i~~t~G~~~ai~~~~  170 (498)
T 3ihj_A           99 SPSFPEDAKKRARRILQACGGNSLGSYSA------SQGVNCIREDVAAYITRRDGGVPADP--DNIYLTTGASDGISTIL  170 (498)
T ss_dssp             CSSSCHHHHHHHHHHHHHC----------------CCSCHHHHHHHHHHHHHHTTTCCCCG--GGEEEESSHHHHHHHHH
T ss_pred             cccCCHHHHHHHHHHHHhccCCCCCCCCC------CCCHHHHHHHHHHHHHHhcCCCCCCc--ccEEEcCCHHHHHHHHH
Confidence            33456666777665554321   112322      12234566666678888875 54221  245567776 9999999


Q ss_pred             HhhcCCCC----EEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhc----CCcEEE
Q 009673          186 TAILKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF----RPKLII  256 (529)
Q Consensus       186 ~all~pGD----~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~----~pklIi  256 (529)
                      .+++++||    +|++++|.|.++.        ..+...|.  ++++|+++++ +|.+|+++|++.+++.    ++++|+
T Consensus       171 ~~l~~~gd~~~d~Vlv~~p~y~~~~--------~~~~~~g~--~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~  240 (498)
T 3ihj_A          171 KILVSGGGKSRTGVMIPIPQYPLYS--------AVISELDA--IQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLC  240 (498)
T ss_dssp             HHHCCCCGGGSEEEEEEESCCTHHH--------HHHHHTTC--EEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEE
T ss_pred             HHHcCCCCCCCCEEEEeCCCchhHH--------HHHHHcCC--EEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEE
Confidence            99999986    9999999876542        13344554  6777777654 4789999999999874    489998


Q ss_pred             EcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccc-cCCCCCc------------c-cEEEecccccc-
Q 009673          257 AGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFKY------------C-DVVTTTTHKSL-  316 (529)
Q Consensus       257 ~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~~~~------------a-Div~~S~hK~l-  316 (529)
                      +++++||+  ..   ++++|.++|++||++||+|++|.. +++.+. ...++..            . -+++.|+||++ 
T Consensus       241 l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~  319 (498)
T 3ihj_A          241 IINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQD-NVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYM  319 (498)
T ss_dssp             EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTT
T ss_pred             EECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccc-cccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccc
Confidence            88899987  33   477899999999999999999643 343321 1112110            1 16778999998 


Q ss_pred             --cCCCCeEEEe---eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHH----------hcCchHHHHHHHHHH
Q 009673          317 --RGPRGGMIFF---KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH----------AQSPEFKVYQNKVVS  381 (529)
Q Consensus       317 --~GprgG~i~~---~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~----------~~~~~~~~~~~~i~~  381 (529)
                        +|.|+||++.   ++      ++.+.+....... . .++....++++.++..          .. .+.....+++.+
T Consensus       320 G~~G~R~G~~~~~~~~~------~l~~~l~~~~~~~-~-~~~~~~q~a~~~~l~~~~~g~~~~~~~~-~~~~~~~~~l~~  390 (498)
T 3ihj_A          320 GECGYRGGYMEVINLHP------EIKGQLVKLLSVR-L-CPPVSGQAAMDIVVNPPVAGEESFEQFS-REKESVLGNLAK  390 (498)
T ss_dssp             CCSSSCCEEEEEESCCH------HHHHHHHHHHHHS-C-CCCHHHHHHHHHHTCCCCTTSTTHHHHH-HHHHHHHHHHHH
T ss_pred             cCcccceEEEEEecCCH------HHHHHHHHHHhcc-C-CCCHHHHHHHHHHhcCCccCcccHHHHH-HHHHHHHHHHHH
Confidence              5899999984   44      6666654432211 1 2233333344433320          00 112455677888


Q ss_pred             HHHHHHHHHHhc-CcEEecCCCCCceEEEccCC----------CCCcHHH--HHHhHhcCCeEEcCCCCCCCCCCCCCCe
Q 009673          382 NCRALASRLVEL-GYKLVSGGSDNHLVLVDLRP----------MGIDGAR--VEKILDMASITLNKNSVPGDKSALVPGG  448 (529)
Q Consensus       382 ~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~----------~~i~~~~--~~~~L~~~GI~v~~~~~Pg~~~~~~~~~  448 (529)
                      +++.+.+.|++. |+.+..+. .+.+.|+++..          .+++.+.  +.++|+++||.+..+..++.  +..+++
T Consensus       391 ~~~~l~~~L~~~~g~~~~~p~-gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~--~~~~~~  467 (498)
T 3ihj_A          391 KAKLTEDLFNQVPGIHCNPLQ-GAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQ--REGTYH  467 (498)
T ss_dssp             HHHHHHHHHHTSTTEECCCCC-BSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCC--CTTCCB
T ss_pred             HHHHHHHHHhcCCCcEecCCC-eEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCC--CCCCCE
Confidence            999999999885 88876542 34455555431          1444444  57788899999865433321  123568


Q ss_pred             EEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          449 IRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       449 iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      +|+++.      .++++++++++.|.++++..
T Consensus       468 ~Ris~~------~~~e~l~~~i~~L~~~~~~~  493 (498)
T 3ihj_A          468 FRMTIL------PPVEKLKTVLQKVKDFHINF  493 (498)
T ss_dssp             EEEECC------SCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeC------CCHHHHHHHHHHHHHHHHHH
Confidence            999972      45899999999999887654

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=99.90  E-value=8.8e-23  Score=214.20  Aligned_cols=357  Identities=13%  Similarity=0.061  Sum_probs=220.8

Q ss_pred             cccCChHHHHHHHHHHHHhhcceeEecCCCC-----CcHHHHHHHh--hhhhccC-CCCCCCCCCCCCchhHHHHHHHHH
Q 009673           83 LGEADPEVCEIITKEKERQFKSLELIASENF-----TSRAVMEAVG--SCLTNKY-SEGLPGKRYYGGNEYIDELETLCQ  154 (529)
Q Consensus        83 l~~~d~~~~~~~~~e~~~~~~~i~L~asen~-----~~~~V~eal~--~~l~~~y-~~G~p~~r~~~g~~~~d~lE~~a~  154 (529)
                      +....+.+++.+.+-. .....|+|..+...     +++.+++++.  ..+.+.. ..+||     +......+++    
T Consensus         7 ~~~~~~~~~~~~~~~~-~~~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp-----~~~~g~~~lr----   76 (423)
T 3ez1_A            7 SRPALDLARQAYEAFK-ARGLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYP-----GGVAGLPSAR----   76 (423)
T ss_dssp             CHHHHHHHHHHHHHHH-HHTCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSC-----SCTTCCHHHH----
T ss_pred             HHHHHHHHHHHHHHhh-cCCceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCC-----CCCCChHHHH----
Confidence            4445555555543322 23366888776643     4567888875  4333111 12331     2112223444    


Q ss_pred             HHHHHHcCCCCCCCceeeecCChH-HHHH--HHHHhhcC--C---------CCEEEEcCCCCCccccccccccccccccc
Q 009673          155 KRALAAFNLDENKWGVNVQPLSGS-PANF--EVYTAILK--P---------HDRIMGLDLPHGGHLSHGFMTPKRRVSGT  220 (529)
Q Consensus       155 ~~la~~~g~~~~~~~~~V~~~sGs-~A~~--~~l~all~--p---------GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~  220 (529)
                      +.++++++++++    +|.+++|+ +++.  .++.++++  |         ||+|++.+|.|.++..        .+...
T Consensus        77 ~~ia~~~~~~~~----~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~  144 (423)
T 3ez1_A           77 ALFAGYLDVKAE----NVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFL--------LLQTL  144 (423)
T ss_dssp             HHHHHHTTSCGG----GEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHH--------HHHHH
T ss_pred             HHHHHHhCCChh----hEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHH--------HHHHc
Confidence            677888898875    45557776 7887  78888888  8         5999999988754421        23344


Q ss_pred             cceEEEEEcccCCCCCCCCHHHHHHHhh-hcCCcEEEEc-CCCCCC--CCCHH---HHHHHH-HHhCCEEEEeccccccc
Q 009673          221 SIYFESMPYRLDESTGLVDYDMLEKTAI-LFRPKLIIAG-ASAYPR--DFDYP---RMRQIA-DAVGALLMMDMAHISGL  292 (529)
Q Consensus       221 g~~~~~v~~~v~~~~~~iD~d~le~~i~-~~~pklIi~~-~s~~p~--~~d~~---~i~~ia-~~~g~~livD~ah~~Gl  292 (529)
                      |.  ++++++++.+  .+|+|+|+++++ ..++++|++. .++||+  ..+.+   +|.++| ++||+++|+|++|....
T Consensus       145 g~--~~~~v~~~~~--g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~  220 (423)
T 3ez1_A          145 GF--ELLTVDMQSD--GPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHH  220 (423)
T ss_dssp             TC--EEEEEEEETT--EECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCB
T ss_pred             CC--EEEeccCCCC--CCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhh
Confidence            54  6667777643  499999999995 2378888765 678886  55555   888888 89999999999965322


Q ss_pred             ccc-cccC--CC--------CCcccEEEeccccc-ccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHH
Q 009673          293 VAA-SVVA--DP--------FKYCDVVTTTTHKS-LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGL  360 (529)
Q Consensus       293 i~~-~~~~--~~--------~~~aDiv~~S~hK~-l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaal  360 (529)
                      ... +..+  +.        ....++++.|+||+ ++|+|.||+++++      ++.+.+.........+.+...+.+ +
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~a-~  293 (423)
T 3ez1_A          221 LVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSE------DNIRWLSKYLGAQSIGPNKVEQAR-H  293 (423)
T ss_dssp             CCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECH------HHHHHHHHHHHHSCSCCCHHHHHH-H
T ss_pred             cCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCH------HHHHHHHHHHhhhccCCCHHHHHH-H
Confidence            222 1111  10        11345889999995 5788999999987      676666543222222333333333 3


Q ss_pred             HHHHHHhc---CchHHHHHHHHHHHHHHHHHHHHh----cC--cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeE
Q 009673          361 AVCLKHAQ---SPEFKVYQNKVVSNCRALASRLVE----LG--YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASIT  431 (529)
Q Consensus       361 a~al~~~~---~~~~~~~~~~i~~~a~~l~~~L~~----~G--~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~  431 (529)
                      ..+++...   ...+++..+.+.++++.+.+.|.+    .|  +.+..+ ...+++++++...  +.+.+.+.|.++||.
T Consensus       294 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p-~~g~~~~~~~~~~--~~~~~~~~l~~~gv~  370 (423)
T 3ez1_A          294 VKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLP-KGGYFISLDTAEP--VADRVVKLAEAAGVS  370 (423)
T ss_dssp             HHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCC-SBSSCEEEEESSS--CHHHHHHHHHHTTEE
T ss_pred             HHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCC-CccEEEEEECCCC--cHHHHHHHHHHCCcE
Confidence            33454311   112344555566666666666654    44  555543 2345677777532  567888999999999


Q ss_pred             EcC-CCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          432 LNK-NSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       432 v~~-~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      +.. +...+......+++|||++...     +++++++.++.|.++++..
T Consensus       371 v~~~g~~~~~~~~~~~~~iRis~~~~-----~~~~i~~~~~~l~~~l~~~  415 (423)
T 3ez1_A          371 LTPAGATYPAGQDPHNRNLRLAPTRP-----PVEEVRTAMQVVAACIRLA  415 (423)
T ss_dssp             CCCTTTTSSTTCCSSSCEEEECCSSS-----CHHHHHHHHHHHHHHHHHH
T ss_pred             EecCcccccCCCCCCCCeEEEEcCCC-----CHHHHHHHHHHHHHHHHHH
Confidence            954 2111111112467899997532     4899999999999988754

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=99.90  E-value=7.6e-23  Score=211.89  Aligned_cols=332  Identities=16%  Similarity=0.093  Sum_probs=202.4

Q ss_pred             HHHHHHHHHHHh-h-cceeEecCC--CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC
Q 009673           90 VCEIITKEKERQ-F-KSLELIASE--NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE  165 (529)
Q Consensus        90 ~~~~~~~e~~~~-~-~~i~L~ase--n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~  165 (529)
                      .+..+....+.. . +.+++...+  .+++++|++++.     .|          ++.   ..+++..++.+++++|++.
T Consensus        14 ~~~~~~~~i~~~g~~~v~~~~~~~~~~~~~~~v~~a~~-----~~----------~~~---~~~~~~~~~~~a~~~g~~~   75 (374)
T 2aeu_A           14 ARKIILEILNEKGRDALYDLSGLSGGFLIDEKDKALLN-----TY----------IGS---SYFAEKVNEYGLKHLGGDE   75 (374)
T ss_dssp             HHHHHHHHHHHTCGGGCEECSSCCCCCCCCHHHHHHHT-----ST----------THH---HHHHHHHHHHHHHHHTCCT
T ss_pred             HHHHHHHHHhccCccceeeecccCCCCCCCHHHHHHHH-----Hh----------cCc---hHHHHHHHHHHHHHhCCCC
Confidence            344444443322 2 456666543  468999999996     12          111   2334455577788999842


Q ss_pred             CCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHH
Q 009673          166 NKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEK  245 (529)
Q Consensus       166 ~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~  245 (529)
                      .+  ..+.+++|++|+..++.++  |||+|++++|.|++|++...     .+...|.  +++.+        .|++++++
T Consensus        76 ~~--~~~~~~ggt~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~-----~~~~~g~--~~~~v--------~d~~~l~~  136 (374)
T 2aeu_A           76 ND--KCVGFNRTSSAILATILAL--KPKKVIHYLPELPGHPSIER-----SCKIVNA--KYFES--------DKVGEILN  136 (374)
T ss_dssp             TE--EEEEESSHHHHHHHHHHHH--CCSEEEEECSSSSCCTHHHH-----HHHHTTC--EEEEE--------SCHHHHHT
T ss_pred             cc--eEEEEcChHHHHHHHHHhC--CCCEEEEecCCCCccHHHHH-----HHHHcCc--EEEEe--------CCHHHHHh
Confidence            11  1255577789999999988  99999999998877653110     1233454  55443        37899988


Q ss_pred             HhhhcCCcE-EEEcCCCCCC---CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccccCCC
Q 009673          246 TAILFRPKL-IIAGASAYPR---DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR  320 (529)
Q Consensus       246 ~i~~~~pkl-Ii~~~s~~p~---~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~Gpr  320 (529)
                      . ++ ++++ |++++++||+   ..++++|.++|++||+++|+|++|..+........+++. +.|++++|+||+++|||
T Consensus       137 ~-~~-~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g~~  214 (374)
T 2aeu_A          137 K-ID-KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGPR  214 (374)
T ss_dssp             T-CC-TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSCS
T ss_pred             c-CC-CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccCcc
Confidence            8 54 8999 8888888875   468999999999999999999987655310010111222 57999999999999999


Q ss_pred             CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH----HHHHHh----
Q 009673          321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL----ASRLVE----  392 (529)
Q Consensus       321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l----~~~L~~----  392 (529)
                      +|++++++      ++.+++....... .++++....+++..+++...    .+..++..++++.+    .+.|.+    
T Consensus       215 ~G~~~~~~------~~~~~l~~~~~~~-~~~~~~~~~~a~~~al~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~L~~  283 (374)
T 2aeu_A          215 GGLLAGKK------ELVDKIYIEGTKF-GLEAQPPLLAGIYRALKNFN----LERIRKAFERAKNFDLSKIEKLNKELKA  283 (374)
T ss_dssp             CEEEEEEH------HHHHHHHHHHHTT-TCBCCHHHHHHHHHHHHHCC----HHHHHHHHHHHHHCCCHHHHHHHHHHTT
T ss_pred             eEEEEECH------HHHHHHHHhhccc-cCCCCHHHHHHHHHHHHHHh----HHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            99999988      6777665433221 12334444445555676531    12334444555444    444443    


Q ss_pred             ----cCcEEecCCCCCceEEE-ccCCCCCc---HH-HHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCH
Q 009673          393 ----LGYKLVSGGSDNHLVLV-DLRPMGID---GA-RVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSE  463 (529)
Q Consensus       393 ----~G~~v~~~gt~~~~~~v-~~~~~~i~---~~-~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~  463 (529)
                          .|+.+..... +.++++ +... ..+   .. .+.++|+++||.+.+    |...+...+++||++....   ..+
T Consensus       284 ~~~~~g~~~~~~~~-g~~~~~~~~~~-~~~~~~~~~~~~~ll~~~gV~v~~----g~~~~~~~~~lRi~~~~~~---~~~  354 (374)
T 2aeu_A          284 IDDNINIVYERTPT-GFVIKRVYKDD-TINIKKLIEIGFNLLKNYGIITIT----VAGMPGASKSLRIDLTSRD---AER  354 (374)
T ss_dssp             TCTTEEEEEEECSS-EEEEEEEESSH-HHHHHHHHHHHHHHHHHHCEECST----TSSSCSSCCSEEEETTSGG---GGG
T ss_pred             hhhccCcceeeCCc-eEEEEeecccc-cccccchHHHHHHHHHhCCEEEec----CCCCCCCCCeEEEEcCCch---HHH
Confidence                2455433222 233333 3321 001   01 334677889999954    3322223568999974322   234


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 009673          464 KEFVAIADFIHEGVEIT  480 (529)
Q Consensus       464 ~d~~~la~~i~~~~~~~  480 (529)
                      .+++++++.|+++++..
T Consensus       355 ~~l~~l~~~l~~~l~~~  371 (374)
T 2aeu_A          355 IDDNYIIKAIVESIKMA  371 (374)
T ss_dssp             SCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            45888888888877643

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=99.90  E-value=1e-22  Score=218.06  Aligned_cols=332  Identities=12%  Similarity=0.002  Sum_probs=215.2

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCC-------ceeeecCChHHHHHHHHH
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKW-------GVNVQPLSGSPANFEVYT  186 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~-------~~~V~~~sGs~A~~~~l~  186 (529)
                      ++..+.+.+.+.+... ..      .|...+...++|+.+.+|+++++|.+.+.+       +.-|.+++||+||+.++.
T Consensus        91 ~~~~~~~~~~~~~n~~-~~------~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~  163 (481)
T 4e1o_A           91 WPSLLGDMLADAINCL-GF------TWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALL  163 (481)
T ss_dssp             HHHHHHHHHHHHHCCC-CS------STTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCcc-cC------CcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHH
Confidence            3445555665555321 11      133345678999999999999999986421       123556778899998887


Q ss_pred             hhcC-------------------CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHh
Q 009673          187 AILK-------------------PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTA  247 (529)
Q Consensus       187 all~-------------------pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i  247 (529)
                      +..+                   |+++|++.+..|.+..        +.+...|.  +++.++++ +++.+|+++|++++
T Consensus       164 ~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~Le~~i  232 (481)
T 4e1o_A          164 AARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVE--------KAGLISLV--KMKFLPVD-DNFSLRGEALQKAI  232 (481)
T ss_dssp             HHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHH--------HHHHHHTC--EEEEECCC-TTSCCCHHHHHHHH
T ss_pred             HHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHH--------HHHHhCCC--ceEEEEcC-CCCcCCHHHHHHHH
Confidence            6532                   6789998887764432        23334454  66677776 57899999999999


Q ss_pred             hhcC-----CcEEEEcCCCC--CCCCCHHHHHHHHHHhCCEEEEecccccccccccccCC---CCCcccEEEeccccccc
Q 009673          248 ILFR-----PKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD---PFKYCDVVTTTTHKSLR  317 (529)
Q Consensus       248 ~~~~-----pklIi~~~s~~--p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~---~~~~aDiv~~S~hK~l~  317 (529)
                      ++.+     |.+|+++.+++  +...|+++|+++|++||+|+++|+||..+....+....   .++.+|++++++|||+.
T Consensus       233 ~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~  312 (481)
T 4e1o_A          233 EEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMM  312 (481)
T ss_dssp             HHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSS
T ss_pred             HHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcC
Confidence            7632     66676664443  34789999999999999999999998766543322211   12357999999999999


Q ss_pred             CCCC-eEEEeeCCCcchhHHHh-hhcc---cccC------------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHH
Q 009673          318 GPRG-GMIFFKKDPVLGVELES-AINN---AVFP------------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV  380 (529)
Q Consensus       318 Gprg-G~i~~~~~~~~~~~l~~-~i~~---~~~p------------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~  380 (529)
                      +|.+ |+++++++     ++.. .+..   ....            ..+++... ...++..+++.+...++.++.++..
T Consensus       313 ~p~g~g~l~~~~~-----~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~-~~l~~~~al~~~g~~g~~~~~~~~~  386 (481)
T 4e1o_A          313 VHFDCTGFWVKDK-----YKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRF-RSVKLWFVIRSFGVKNLQAHVRHGT  386 (481)
T ss_dssp             CCSSCEEEEESBH-----HHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCC-THHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCceEEEEEeCH-----HHHHHHhcCCchhccCcccCCCCCcccccccCCCCc-cHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            9988 88888774     3322 1110   0000            11122111 2334445555554567788999999


Q ss_pred             HHHHHHHHHHHhc-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCe-EEcCCCCCCCCCCCCCCeEEEccCCCcc
Q 009673          381 SNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASI-TLNKNSVPGDKSALVPGGIRIGSPAMTT  458 (529)
Q Consensus       381 ~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI-~v~~~~~Pg~~~~~~~~~iRig~~~~tt  458 (529)
                      ++++++.+.|++. |++++.+. ..+++++.+...+....++.+.|.+.|+ .+..    +.  ..+...+|+++.... 
T Consensus       387 ~~a~~l~~~L~~~~g~~~~~~~-~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~----~~--~~g~~~lR~~~~~~~-  458 (481)
T 4e1o_A          387 EMAKYFESLVRNDPSFEIPAKR-HLGLVVFRLKGPNSLTENVLKEIAKAGRLFLIP----AT--IQDKLIIRFTVTSQF-  458 (481)
T ss_dssp             HHHHHHHHHHHTCTTEECCSCC-CSSEEEEEESSCHHHHHHHHHHHHHHCSSBCEE----EE--ETTEEEEEEECCCTT-
T ss_pred             HHHHHHHHHHhcCCCeEEecCC-ceeEEEEEeCCchHHHHHHHHHHHhCCeEEEEe----eE--ECCEEEEEEEeCCCC-
Confidence            9999999999984 99987542 3455666664322223556677766674 3321    11  112457999864322 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHH
Q 009673          459 RGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       459 ~g~~~~d~~~la~~i~~~~~~  479 (529)
                        .+++|++++.+.|+++...
T Consensus       459 --tt~~di~~~~~~i~~~~~~  477 (481)
T 4e1o_A          459 --TTRDDILRDWNLIRDAATL  477 (481)
T ss_dssp             --CCHHHHHHHHHHHHHHHHH
T ss_pred             --CCHHHHHHHHHHHHHHHHH
Confidence              3589999999999987753

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=99.90  E-value=7.4e-23  Score=215.12  Aligned_cols=359  Identities=14%  Similarity=0.043  Sum_probs=216.1

Q ss_pred             hhhcccCChHHHHHHHHHHHHhhcceeEecCCCC-----CcHHHHHHHhhhhh--cc-CCCCCCCCCCCCCchhHHHHHH
Q 009673           80 DYSLGEADPEVCEIITKEKERQFKSLELIASENF-----TSRAVMEAVGSCLT--NK-YSEGLPGKRYYGGNEYIDELET  151 (529)
Q Consensus        80 ~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~-----~~~~V~eal~~~l~--~~-y~~G~p~~r~~~g~~~~d~lE~  151 (529)
                      .+.+......++....+... +...|+|..+++.     +++.+++++...+.  .. ...+|+.      .....+++ 
T Consensus        11 ~~~l~~~~~~~~~~~~~l~~-~~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~------~~G~~~lr-   82 (422)
T 3d6k_A           11 AARLAQVREEVTAKYAELKA-KNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGG------LLGIADIR-   82 (422)
T ss_dssp             -------CHHHHHHHHHHHH-TTCCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCC------SSCCHHHH-
T ss_pred             HHHHHhhHHHHHHHHHHHhc-cCCeEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCC------CCCCHHHH-
Confidence            34455566666665443322 3346888888873     34567777654421  11 1123332      11123444 


Q ss_pred             HHHHHHHHHcCCCCCCCceeeecCChH-HHH--HHHHHhhcCC------------CCEEEEcCCCCCccccccccccccc
Q 009673          152 LCQKRALAAFNLDENKWGVNVQPLSGS-PAN--FEVYTAILKP------------HDRIMGLDLPHGGHLSHGFMTPKRR  216 (529)
Q Consensus       152 ~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~--~~~l~all~p------------GD~Vl~~~~~~~g~~s~g~~~~~~~  216 (529)
                         +.++++++++++    +|.+++|+ +++  ..++.++.++            ||+|++.+|.|.++..        .
T Consensus        83 ---~~ia~~~~~~~~----~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~--------~  147 (422)
T 3d6k_A           83 ---ELWAEALGLPAD----LVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFT--------I  147 (422)
T ss_dssp             ---HHHHHHHTCCGG----GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHH--------H
T ss_pred             ---HHHHHHhCCChh----HEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHH--------H
Confidence               566777888875    45567777 676  4556677666            3589999998755421        2


Q ss_pred             cccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE-EcCCCCCC--CCCHH---HHHHHHH-HhCCEEEEecccc
Q 009673          217 VSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII-AGASAYPR--DFDYP---RMRQIAD-AVGALLMMDMAHI  289 (529)
Q Consensus       217 i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi-~~~s~~p~--~~d~~---~i~~ia~-~~g~~livD~ah~  289 (529)
                      +...|.  +++.+++++ ++ +|+++|++.+++.++++|+ +++++||+  ..+.+   +|.++|+ ++|++||+|++|.
T Consensus       148 ~~~~g~--~~~~v~~~~-~g-~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~  223 (422)
T 3d6k_A          148 TEHFGF--EMINVPMTD-EG-PDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYA  223 (422)
T ss_dssp             HHHHTC--EEEEEEEET-TE-ECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTT
T ss_pred             HHHcCC--EEEecCCCC-CC-CCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCcc
Confidence            334454  666777764 33 9999999999755789888 56788886  56655   7777777 8999999999976


Q ss_pred             c-ccccccccCCCC---------CcccEEEeccccc-ccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHH
Q 009673          290 S-GLVAASVVADPF---------KYCDVVTTTTHKS-LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIG  358 (529)
Q Consensus       290 ~-Gli~~~~~~~~~---------~~aDiv~~S~hK~-l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~ia  358 (529)
                      . ++...+....++         ...+++++|+||+ ++|+|.||+++++      ++.+.+.........+.+.. ..+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~------~l~~~l~~~~~~~~~~~~~~-~q~  296 (422)
T 3d6k_A          224 LHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSK------ENIEWYASHANVRGIGPNKL-NQL  296 (422)
T ss_dssp             TCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCH------HHHHHHHHHHHHHCSCCCHH-HHH
T ss_pred             ccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeCH------HHHHHHHHHHHhhcCCCCHH-HHH
Confidence            3 333222111111         1346889999996 4788999999987      67666654322222233333 333


Q ss_pred             HHHHHHHHhc--CchHHHHHHHHHHHHHHHHHHHHh----cC-cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeE
Q 009673          359 GLAVCLKHAQ--SPEFKVYQNKVVSNCRALASRLVE----LG-YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASIT  431 (529)
Q Consensus       359 ala~al~~~~--~~~~~~~~~~i~~~a~~l~~~L~~----~G-~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~  431 (529)
                      ++..+++...  ....++..+.+.++++.+.+.|.+    .| +.+..+ ...+++|+++...  +.+++.+.|.++||.
T Consensus       297 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p-~~g~~~~~~~~~~--~~~~~~~~l~~~gV~  373 (422)
T 3d6k_A          297 AHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSP-TGGYFISVDVVPG--TASRVVELAKEAGIA  373 (422)
T ss_dssp             HHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCC-SBSSCEEEEESTT--CHHHHHHHHHHTTEE
T ss_pred             HHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCC-CcceEEEEECCCC--CHHHHHHHHHHCCeE
Confidence            3333443200  012344556666778888888765    23 565443 2356678887532  567788889999999


Q ss_pred             EcCC-CCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          432 LNKN-SVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       432 v~~~-~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      +..+ ...+......+++|||++..     .++++++++++.|++++...
T Consensus       374 v~~~g~~f~~~~~~~~~~iRis~~~-----~~~e~i~~~~~~l~~~l~~~  418 (422)
T 3d6k_A          374 LTGAGSSFPLHNDPNNENIRLAPSL-----PPVAELEVAMDGFATCVLMA  418 (422)
T ss_dssp             CCCTTTTSGGGCCTTSCEEEECCSS-----SCHHHHHHHHHHHHHHHHHH
T ss_pred             EEcCccccCCCCCCCCCeEEEecCC-----CCHHHHHHHHHHHHHHHHHH
Confidence            9542 11100000135789999754     34899999999999887643

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=99.90  E-value=5.9e-23  Score=214.69  Aligned_cols=346  Identities=10%  Similarity=-0.001  Sum_probs=210.8

Q ss_pred             hcceeEecCCCCCc----HHHHHHHhhhhhccC----CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeee
Q 009673          102 FKSLELIASENFTS----RAVMEAVGSCLTNKY----SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQ  173 (529)
Q Consensus       102 ~~~i~L~asen~~~----~~V~eal~~~l~~~y----~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~  173 (529)
                      .+.|+|..+.+...    +.+.+++...+.+..    ..+|+.      .....++++...+++.+.+|...+.  .+|.
T Consensus        31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~------~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~  102 (417)
T 3g7q_A           31 PGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDG------PQGKTALLNALAVLLRETLGWDIEP--QNIA  102 (417)
T ss_dssp             -CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTC------TTSHHHHHHHHHHHHHHHHCCCCCG--GGEE
T ss_pred             CCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCC------CCCcHHHHHHHHHHHHHHhCCCCCc--ccEE
Confidence            36688887765543    455666665543321    012322      2234567766667777777765321  2455


Q ss_pred             cCChH-HHHHHHHHhhcCCCC-----EEEEc-CCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHH
Q 009673          174 PLSGS-PANFEVYTAILKPHD-----RIMGL-DLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKT  246 (529)
Q Consensus       174 ~~sGs-~A~~~~l~all~pGD-----~Vl~~-~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~  246 (529)
                      +++|+ +|+..++.++++|||     +|+++ +|.|.++......    .-...+....+..++.+..++.+|+++|+  
T Consensus       103 ~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--  176 (417)
T 3g7q_A          103 LTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLE----DDLFVSARPNIELLPEGQFKYHVDFEHLH--  176 (417)
T ss_dssp             EESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC---------CCEEECCCEEEEEGGGEEEEECCGGGCC--
T ss_pred             EeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccc----hhhhccccCcccccCCcccccccCHHHhc--
Confidence            56665 999999999999988     89987 8877554321100    00111222244444432123568999887  


Q ss_pred             hhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccc---cccccCCCCCcccEEEecccccc-c
Q 009673          247 AILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLV---AASVVADPFKYCDVVTTTTHKSL-R  317 (529)
Q Consensus       247 i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli---~~~~~~~~~~~aDiv~~S~hK~l-~  317 (529)
                      +++ ++++|++++++||+  ..+   +++|.++|++||+++|+|++|.....   ..+..+ .....+++++|+||++ +
T Consensus       177 ~~~-~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~  254 (417)
T 3g7q_A          177 IGE-ETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARP-LWNPNIILCMSLSKLGLP  254 (417)
T ss_dssp             CCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCC-CCCTTEEEEEESGGGTCT
T ss_pred             ccc-CceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccccccccccc-CCCCCEEEEEechhccCC
Confidence            555 78999999888887  556   88999999999999999999753211   111111 1124578899999964 6


Q ss_pred             CCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHH----H-HHHHHHHHHHHHHHHHHh
Q 009673          318 GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK----V-YQNKVVSNCRALASRLVE  392 (529)
Q Consensus       318 GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~----~-~~~~i~~~a~~l~~~L~~  392 (529)
                      |.|.||+++++      ++.+.+.........+++...+. ++...++.   .++.    + ..+++.++++.+.+.|.+
T Consensus       255 G~r~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~  324 (417)
T 3g7q_A          255 GSRCGIIIAND------KTITAIANMNGIISLAPGGMGPA-MMCEMIKR---NDLLRLSETVIKPFYYQRVQQTIAIIRR  324 (417)
T ss_dssp             TSCCEEEECCH------HHHHHHHHHHHHHCCCCCSHHHH-HHHHHHHT---TCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             CcceEEEEeCH------HHHHHHHHhhcceeeCCCcHHHH-HHHHHHcC---cchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            77889999987      67666654322111222223222 22333432   2221    2 455667778888888876


Q ss_pred             c----CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCC--C--CCCeEEEccCCCccCCCCHH
Q 009673          393 L----GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSA--L--VPGGIRIGSPAMTTRGFSEK  464 (529)
Q Consensus       393 ~----G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~--~--~~~~iRig~~~~tt~g~~~~  464 (529)
                      .    |+.+..+ ..+.++|+++...+++..++.+.|.++||.+..+...+....  .  .+++|||++..      +++
T Consensus       325 ~l~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~------~~~  397 (417)
T 3g7q_A          325 YLSEERCLIHKP-EGAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP------EPD  397 (417)
T ss_dssp             HCCTTTCEEECC-CBSSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS------CHH
T ss_pred             hcccCCceeeCC-CcceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC------CHH
Confidence            2    5776644 235667788865466788888889999999865432111100  0  14689999752      589


Q ss_pred             HHHHHHHHHHHHHHHH
Q 009673          465 EFVAIADFIHEGVEIT  480 (529)
Q Consensus       465 d~~~la~~i~~~~~~~  480 (529)
                      ++++.++.|.+++...
T Consensus       398 ~i~~~~~~l~~~l~~~  413 (417)
T 3g7q_A          398 KIEAGVKILAEEIERA  413 (417)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999988643

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=99.90  E-value=1.7e-22  Score=206.20  Aligned_cols=322  Identities=12%  Similarity=0.091  Sum_probs=208.0

Q ss_pred             ceeEecCCC-CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673          104 SLELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF  182 (529)
Q Consensus       104 ~i~L~asen-~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~  182 (529)
                      .+.|..+.+ .+++.|++++...+. .|..+      ++..    ++.+.+++++++++|.++++   .+...+|++|+.
T Consensus        15 ~i~l~~~~~~~~~~~v~~a~~~~~~-~~~~~------~g~~----~~~~~~~~~l~~~~g~~~~~---v~~~~g~t~a~~   80 (359)
T 1svv_A           15 PYSFVNDYSVGMHPKILDLMARDNM-TQHAG------YGQD----SHCAKAARLIGELLERPDAD---VHFISGGTQTNL   80 (359)
T ss_dssp             CEECSCSCSSCCCHHHHHHHHHHTT-CCCCS------TTCS----HHHHHHHHHHHHHHTCTTSE---EEEESCHHHHHH
T ss_pred             eEEecCCCcCCCCHHHHHHHHHHHh-hcccc------cccc----HHHHHHHHHHHHHhCCCCcc---EEEeCCchHHHH
Confidence            466655443 578999999988774 33221      1112    33445558899999987642   233456669999


Q ss_pred             HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc------CCcEEE
Q 009673          183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF------RPKLII  256 (529)
Q Consensus       183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~------~pklIi  256 (529)
                      .++.++++|||+|+++++.|.++....      .+...|.  +++.++.+  ++.+|+++|++.+++.      ++++|+
T Consensus        81 ~~~~~~~~~gd~vl~~~~~~~~~~~~~------~~~~~g~--~~~~v~~~--~~~~d~~~l~~~l~~~~~~~~~~~~~v~  150 (359)
T 1svv_A           81 IACSLALRPWEAVIATQLGHISTHETG------AIEATGH--KVVTAPCP--DGKLRVADIESALHENRSEHMVIPKLVY  150 (359)
T ss_dssp             HHHHHHCCTTEEEEEETTSHHHHSSTT------HHHHTTC--CEEEECCT--TSCCCHHHHHHHHHHSCSTTSCEEEEEE
T ss_pred             HHHHHHhCCCCEEEEcccchHHHHHHH------HHhcCCC--eeEEEeCC--CCeecHHHHHHHHHHHHhccCCCceEEE
Confidence            999999999999999999876553210      1233454  56666654  5789999999999873      288998


Q ss_pred             EcCCCCCC-CCC---HHHHHHHHHHhCCEEEEeccc---ccccccccccCCCC---CcccEEEecccccccCCCC-eEEE
Q 009673          257 AGASAYPR-DFD---YPRMRQIADAVGALLMMDMAH---ISGLVAASVVADPF---KYCDVVTTTTHKSLRGPRG-GMIF  325 (529)
Q Consensus       257 ~~~s~~p~-~~d---~~~i~~ia~~~g~~livD~ah---~~Gli~~~~~~~~~---~~aDiv~~S~hK~l~Gprg-G~i~  325 (529)
                      ++++++.+ ..+   +++|.++|++||+++|+|++|   ..|....  ....+   ..+|+++.|+||+ .+|.+ |+++
T Consensus       151 ~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~~d~~~~s~~K~-g~~~~~g~l~  227 (359)
T 1svv_A          151 ISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVN--DLTLADIARLTDMFYIGATKA-GGMFGEALII  227 (359)
T ss_dssp             EESSCTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC--CCCHHHHHHHCSEEEEECTTT-TCSSCEEEEE
T ss_pred             EEcCCCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc--chhhhhhhhcCCEEEEecccC-CCCCceEEEE
Confidence            88774222 566   889999999999999999997   3332211  11111   1478999999997 56777 9999


Q ss_pred             eeCCCcchhHHHhhhcccc-cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCC
Q 009673          326 FKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN  404 (529)
Q Consensus       326 ~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~  404 (529)
                      +++      ++.+.+.... ..+...+......++++.+   +...++++..+++.++++++.+.|+..|+++..+. ..
T Consensus       228 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~  297 (359)
T 1svv_A          228 LND------ALKPNARHLIKQRGALMAKGWLLGIQFEVL---MKDNLFFELGAHSNKMAAILKAGLEACGIRLAWPS-AS  297 (359)
T ss_dssp             CSG------GGCTTHHHHHHHTTCCCTTTHHHHHHHHHH---TSTTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCC-SS
T ss_pred             Ecc------cHHHHHHHHHhcCCcccccchhhHHHHHHH---HhhhhHHHHHHHHHHHHHHHHHHhccCCeEEccCC-cc
Confidence            877      4544443221 0111101122222333222   22345677888999999999999955788876442 34


Q ss_pred             ceEEEccCCCCCcHHHHHHhHhcC-CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          405 HLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       405 ~~~~v~~~~~~i~~~~~~~~L~~~-GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +++++++.      .++.+.|.+. ||.+-.. .     +..+++|||+.+..    .+++|++++++.|+++++
T Consensus       298 ~~~~~~~~------~~~~~~l~~~~gi~v~~~-~-----~~~~~~iRi~~~~~----~~~~~i~~~~~~l~~~~~  356 (359)
T 1svv_A          298 NQLFPILE------NTMIAELNNDFDMYTVEP-L-----KDGTCIMRLCTSWA----TEEKECHRFVEVLKRLVA  356 (359)
T ss_dssp             SEECBEEE------HHHHHHHTTTEECEEEEE-E-----TTTEEEEEEECCTT----CCHHHHHHHHHHHHHC--
T ss_pred             ceEEEEcC------HHHHHHHHHhcCEEEEec-c-----cCCCceEEEEccCc----CCHHHHHHHHHHHHHHHh
Confidence            55555442      3566666665 9998210 0     11356899986543    458999999999988764

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.90  E-value=1.5e-22  Score=227.02  Aligned_cols=298  Identities=14%  Similarity=0.080  Sum_probs=207.9

Q ss_pred             HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673          153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL  231 (529)
Q Consensus       153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v  231 (529)
                      +++.+++++|.+.     .+.+++|+ +||.+++.++++|||+|+++.+.|.+.+.        .+...|.  +++.++.
T Consensus       210 ~ee~la~l~G~d~-----~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~--------~~~~~G~--~~v~v~~  274 (755)
T 2vyc_A          210 SEKYAARVFGADR-----SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQ--------GLMLTGA--KPVYMVP  274 (755)
T ss_dssp             HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHHCC--EEEEECC
T ss_pred             HHHHHHHHhCCCc-----eEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHH--------HHHHcCC--EEEEEeC
Confidence            4578899999874     24457887 89999999999999999999988765431        2334555  5666555


Q ss_pred             CCCC----CCC-----CHHHHHHHhhhc-CC--------cEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEeccccccc
Q 009673          232 DEST----GLV-----DYDMLEKTAILF-RP--------KLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGL  292 (529)
Q Consensus       232 ~~~~----~~i-----D~d~le~~i~~~-~p--------klIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gl  292 (529)
                      +.++    +.+     |+++|++++++. ++        ++++++++++.+ ..|+++|+++|++||++|++|+||+.++
T Consensus       275 ~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~pn~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~  354 (755)
T 2vyc_A          275 SRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYA  354 (755)
T ss_dssp             CBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESSCTTSEEECHHHHHHHHTTTCSEEEEECTTCTTG
T ss_pred             CCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECCCCCceecCHHHHHHHHHHcCCEEEEECcCchhc
Confidence            4322    235     999999999752 23        488887776544 7899999999999999999999997654


Q ss_pred             cccccc--CCCCCc--ccE------EEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHH
Q 009673          293 VAASVV--ADPFKY--CDV------VTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLA  361 (529)
Q Consensus       293 i~~~~~--~~~~~~--aDi------v~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala  361 (529)
                      ...+..  ..++.+  +|+      +++|+||+++|+++ |+++++++.... + ...++........++|++..++++.
T Consensus       355 ~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i-~-~~~~~~~~~~~~s~sp~~~~iaal~  432 (755)
T 2vyc_A          355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAI-N-FSRFNQAYMMHATTSPLYAICASND  432 (755)
T ss_dssp             GGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCC-C-HHHHHHHHHHTSCSSCCHHHHHHHH
T ss_pred             ccCcccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCccccc-C-HHHHHHHHHHhCCCCHHHHHHHHHH
Confidence            333211  122233  565      99999999999985 888887631000 0 1122222112235788999999999


Q ss_pred             HHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cC---------cEEecCC------------------------------
Q 009673          362 VCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LG---------YKLVSGG------------------------------  401 (529)
Q Consensus       362 ~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G---------~~v~~~g------------------------------  401 (529)
                      +|++.+...+..++.++..++++.+++.|++ .|         ++++.+.                              
T Consensus       433 aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (755)
T 2vyc_A          433 VAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVM  512 (755)
T ss_dssp             HHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBC
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhhcc
Confidence            9998876554678889999999999999987 35         6554321                              


Q ss_pred             -------------C-----CCceEEEccCCC---------CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccC
Q 009673          402 -------------S-----DNHLVLVDLRPM---------GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSP  454 (529)
Q Consensus       402 -------------t-----~~~~~~v~~~~~---------~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~  454 (529)
                                   .     |...+.++++..         |+++..+.+.|+++||.+.+.         ..+.+|+.++
T Consensus       513 ~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~---------~~~~v~~~~~  583 (755)
T 2vyc_A          513 HPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRT---------TDFQIMFLFS  583 (755)
T ss_dssp             CTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEE---------CSSEEEEECC
T ss_pred             CcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeec---------CCCeEEEEEC
Confidence                         0     223345555432         455588999999999988542         2567998765


Q ss_pred             CCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          455 AMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       455 ~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      .    |.++++++++++.|.++.+..
T Consensus       584 ~----g~t~~~~~~l~~al~~~~~~~  605 (755)
T 2vyc_A          584 M----GVTRGKWGTLVNTLCSFKRHY  605 (755)
T ss_dssp             T----TCCTTTTHHHHHHHHHHHHHH
T ss_pred             C----CCCHHHHHHHHHHHHHHHHhh
Confidence            4    456899999999998886543

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.90  E-value=3.9e-22  Score=208.69  Aligned_cols=306  Identities=17%  Similarity=0.147  Sum_probs=197.5

Q ss_pred             HHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhc--cCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCC
Q 009673           89 EVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTN--KYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN  166 (529)
Q Consensus        89 ~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~--~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~  166 (529)
                      ++++.++++...+...++.++..|.  .+|+++|......  .+.. ..+  |.-+....+++|    +.+++++|.+. 
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~n~--~~vl~a~~~~~~~~~~~~~-~~~--~~y~~~~~~~Le----~~lA~l~g~e~-   76 (409)
T 3jzl_A            7 AIRKKVETQIDDLQNKTDEIAEFNQ--AKVLDAFQENKVSDFHFHP-STG--YGYDDEGRDTLE----RVYATVFKTEA-   76 (409)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGGCC-CCT--TCTTCHHHHHHH----HHHHHHHTCSE-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHhhhhhhccCC-CcC--CCCChhHHHHHH----HHHHHHhCCCc-
Confidence            3455555555555566666766664  6788888765421  1211 111  111223355565    67899999986 


Q ss_pred             CCceeee--cCChHHHHHHHHHhhcCCCCEEEEcC-CCCCccccccc-cc-cccccccccceEEEEEcccCCCCCCCCHH
Q 009673          167 KWGVNVQ--PLSGSPANFEVYTAILKPHDRIMGLD-LPHGGHLSHGF-MT-PKRRVSGTSIYFESMPYRLDESTGLVDYD  241 (529)
Q Consensus       167 ~~~~~V~--~~sGs~A~~~~l~all~pGD~Vl~~~-~~~~g~~s~g~-~~-~~~~i~~~g~~~~~v~~~v~~~~~~iD~d  241 (529)
                         ..|.  ++||++|+..++.++++|||+|++.+ +.|++.....- .. ....+...|.  +++.++++ +++.+|+|
T Consensus        77 ---alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~--~~~~v~~~-~~g~~d~e  150 (409)
T 3jzl_A           77 ---ALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHI--GYSSVPLL-ENGDVDFP  150 (409)
T ss_dssp             ---EEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTC--EEEECCCC-TTSCCCHH
T ss_pred             ---EEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCC--EEEEeCCC-CCCCcCHH
Confidence               3443  68999999999999999999999998 77665421000 00 0001223344  67777776 46889999


Q ss_pred             HHHHHhhhcCCcEEEEcC----CCCCC--CCCHHHHHHHHHH--hCCEEEEecccccccccccccCCCCC-cccEEEecc
Q 009673          242 MLEKTAILFRPKLIIAGA----SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTT  312 (529)
Q Consensus       242 ~le~~i~~~~pklIi~~~----s~~p~--~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~  312 (529)
                      ++++++++ ++|+|+++.    ++|++  ..|+++|+++|++  +|+++++|++|..+...    ..+.. ++|++++|+
T Consensus       151 ~l~~ai~~-~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~----~~p~~~g~Div~~S~  225 (409)
T 3jzl_A          151 RIAKKMTP-KTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEY----QEPPEVGADIIAGSL  225 (409)
T ss_dssp             HHHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSS----CCSGGGTCSEEEEET
T ss_pred             HHHHhccC-CCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCccccccc----CCccccCCeEEEECc
Confidence            99999987 899999987    77776  5689999999999  99999999997655321    12333 689999999


Q ss_pred             cccccC---CCCeEEEeeCCCcchhHHHhhhccc-ccCCC--CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 009673          313 HKSLRG---PRGGMIFFKKDPVLGVELESAINNA-VFPGL--QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL  386 (529)
Q Consensus       313 hK~l~G---prgG~i~~~~~~~~~~~l~~~i~~~-~~p~~--~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l  386 (529)
                      ||++.|   +.||++++++      ++.+++... ..+++  ..++......++...++.     ...++++..+|++++
T Consensus       226 sK~lgg~~~~~GG~v~~~~------~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~~-----~~~r~~~~~~~a~~l  294 (409)
T 3jzl_A          226 IKNPGGGLAKTGGYIAGKE------ALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFFL-----APHVTAQAIKGARFT  294 (409)
T ss_dssp             TSGGGTTTCSSCEEEEECH------HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHH-----HHHHHHHHHHHHHHH
T ss_pred             cccCCccCCceEEEEEeCH------HHHHHHHHHhccccccccccccHHHHHHHHHHHhh-----HHHHHHHHHHHHHHH
Confidence            999976   5689999987      777766542 12222  112222111222222322     356788899999999


Q ss_pred             HHHHHhcCcEEecCCCCCc-----eEEEccCCCCCcHHHHHHhHhcCC
Q 009673          387 ASRLVELGYKLVSGGSDNH-----LVLVDLRPMGIDGARVEKILDMAS  429 (529)
Q Consensus       387 ~~~L~~~G~~v~~~gt~~~-----~~~v~~~~~~i~~~~~~~~L~~~G  429 (529)
                      ++.|++.|+++.++  .++     +..+.+.. ......+.+.|++..
T Consensus       295 a~~L~~~g~~v~p~--~~~~~~~~i~~i~l~~-~~~~~~~~~~L~~~~  339 (409)
T 3jzl_A          295 AAMLAEFGVEADPV--WDAPRTDLIQSVSFHN-KEKMVAFAQAIQAAS  339 (409)
T ss_dssp             HHHHHHTTCEEESC--TTSCCSSSCCEEECSC-HHHHHHHHHHHHHTS
T ss_pred             HHHHHhCCCcccCC--CCCCCccEEEEEEeCC-HHHHHHHHHHHHhcC
Confidence            99999999988543  223     44444531 112234556666654

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.90  E-value=8.6e-23  Score=209.13  Aligned_cols=330  Identities=12%  Similarity=0.053  Sum_probs=206.2

Q ss_pred             eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 009673          105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV  184 (529)
Q Consensus       105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~  184 (529)
                      -.|..+.++..+++++++...+    . +..+...|+..+...+++    +++++++|.+.     .|.+++|++|+..+
T Consensus        13 ~~l~~~~~p~~~~~~~~~~~~~----~-~~~~~~~y~~~~~~~~l~----~~la~~~~~~~-----~i~~~~G~~a~~~a   78 (357)
T 3lws_A           13 TGQISGHGKRNVGVLKTAFAAV----A-DEMASDQYGTGAIIEPFE----QKFADVLGMDD-----AVFFPSGTMAQQVA   78 (357)
T ss_dssp             SEESSBSSCCBHHHHHHHHTTS----C-TTCBCEETTEETTHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHH
T ss_pred             cccccCCCCCCHHHHHHHHHHh----h-cccCcccccCChHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHHH
Confidence            4456677776677766654332    1 111222354445566666    67888999864     35568999999999


Q ss_pred             HHhhcCCCC--EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673          185 YTAILKPHD--RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY  262 (529)
Q Consensus       185 l~all~pGD--~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~  262 (529)
                      +.++++|||  .|++..+.|...+..+     ......|.  ++++++.  +++.+|+++|+++.   ++++|++++++|
T Consensus        79 l~~~~~~gd~~~vi~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~--~~~~~d~~~l~~~~---~~~~v~~~~p~n  146 (357)
T 3lws_A           79 LRIWSDETDNRTVAYHPLCHLEIHEQD-----GLKELHPI--ETILVGA--ADRLMTLDEIKALP---DIACLLLELPQR  146 (357)
T ss_dssp             HHHHHHHHTCCEEEECTTCHHHHSSTT-----HHHHHSSC--EEEECSC--TTSCCCHHHHHTCC---SCSEEEEESSBG
T ss_pred             HHHHhhcCCCcEEEecccceeeeeccc-----hhhhccCc--EEEEecC--CCCCcCHHHHhcCc---CcceEEEEcccc
Confidence            999999998  6666655433221100     01122343  6666653  45789999999873   489999998887


Q ss_pred             CC---CC---CHHHHHHHHHHhCCEEEEeccccccccc-ccccCCCC-CcccEEEecccccccCCCCeEEEeeCCCcchh
Q 009673          263 PR---DF---DYPRMRQIADAVGALLMMDMAHISGLVA-ASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGV  334 (529)
Q Consensus       263 p~---~~---d~~~i~~ia~~~g~~livD~ah~~Gli~-~~~~~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~  334 (529)
                      |+   ..   ++++|.++|++||++||+|++|..+... .+.....+ .+.|++++|+||+|.||.||+++.++      
T Consensus       147 p~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~------  220 (357)
T 3lws_A          147 EIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIAGAILAGPA------  220 (357)
T ss_dssp             GGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSSCEEEEECH------
T ss_pred             cCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCceEEEEcCH------
Confidence            53   34   4889999999999999999997632211 11111111 24788899999999899999999887      


Q ss_pred             HHHhhhcccc--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEEEcc
Q 009673          335 ELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDL  411 (529)
Q Consensus       335 ~l~~~i~~~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~  411 (529)
                      ++.+.+....  +.+..........+++ .+++..     .+..++..++++++.+.|++. |+++......++++|+++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~  294 (357)
T 3lws_A          221 AFCQTARIWKRRYGGDLISLYPYIVSAD-YYYELR-----KDRMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHF  294 (357)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCHHHHHHHH-HHHHHH-----TTCHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEE
T ss_pred             HHHHHHHHHHHHhcCCcccchHHHHHHH-HHHHHH-----HHHHHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEe
Confidence            6666654321  1111111222222222 345542     122445677788999999885 888743223456778887


Q ss_pred             CCCC-CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          412 RPMG-IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       412 ~~~~-i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      ...+ .+..++.+.|.++||.+..+..++   + ..+.+|+++.... ...+++++++..+.|.+++
T Consensus       295 ~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~---~-~~~~~r~~i~~~~-~~~~~~~l~~al~~l~~al  356 (357)
T 3lws_A          295 DGQAADISPKLEQVQEETGLGFVGYLVDK---D-GYCSTEISVGDAY-GELDQQTRDAGFARLRQAF  356 (357)
T ss_dssp             ESCHHHHHHHHHHHHHHHCEESCSCCEEC---S-SEEEEEEEBCTTG-GGSCHHHHHHHHHHHHHHC
T ss_pred             cCChHHHHHHHHHHHHhcCeEEecccccC---C-CceEEEEEecchh-hhcCHHHHHHHHHHHHHhc
Confidence            5321 124667888999999995542211   1 2347998754322 2256788888888877654

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=99.90  E-value=3.6e-22  Score=213.43  Aligned_cols=312  Identities=11%  Similarity=-0.033  Sum_probs=205.2

Q ss_pred             CCchhHHHHHHHHHHHHHHHcCCCCCC------CceeeecCChHHHHHHHHHhhc-------------------CCCCEE
Q 009673          141 GGNEYIDELETLCQKRALAAFNLDENK------WGVNVQPLSGSPANFEVYTAIL-------------------KPHDRI  195 (529)
Q Consensus       141 ~g~~~~d~lE~~a~~~la~~~g~~~~~------~~~~V~~~sGs~A~~~~l~all-------------------~pGD~V  195 (529)
                      ...+...++|+.+.+|+++++|.+.+.      .+.-|.+++||+||+.++.+..                   .|+++|
T Consensus       106 ~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v  185 (475)
T 3k40_A          106 IASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVG  185 (475)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEE
T ss_pred             cCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEE
Confidence            335667899999999999999998531      0123556788899998887652                   145789


Q ss_pred             EEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcC-----CcEEEEcCCC--CCCCCCH
Q 009673          196 MGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAGASA--YPRDFDY  268 (529)
Q Consensus       196 l~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~-----pklIi~~~s~--~p~~~d~  268 (529)
                      ++....|.+..        +.+...|.  +++.++++ +++ +|+++|++++++.+     |.+|+++.++  .+...|+
T Consensus       186 i~s~~~H~s~~--------~~~~~~g~--~~~~v~~d-~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l  253 (475)
T 3k40_A          186 YCSDQAHSSVE--------RAGLLGGV--KLRSVQSE-NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYL  253 (475)
T ss_dssp             EEETTSCHHHH--------HHHHHHTC--EEEEECCB-TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCH
T ss_pred             EECCCchHHHH--------HHHHHcCC--ceEEEECC-CCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCH
Confidence            98888765432        23344565  66777776 467 99999999997632     6666666433  3348899


Q ss_pred             HHHHHHHHHhCCEEEEecccccccccccccCC---CCCcccEEEecccccccCCCC-eEEEeeCCCcchhHH-Hhhhccc
Q 009673          269 PRMRQIADAVGALLMMDMAHISGLVAASVVAD---PFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL-ESAINNA  343 (529)
Q Consensus       269 ~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~---~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l-~~~i~~~  343 (529)
                      ++|+++|++||+|+++|+||..+....+....   .++.+|++++++|||+.+|.| |+++++++     +. .+.+...
T Consensus       254 ~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~-----~~l~~~~~~~  328 (475)
T 3k40_A          254 DECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDP-----SWVVNAFNVD  328 (475)
T ss_dssp             HHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSG-----GGC-------
T ss_pred             HHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCH-----HHHHHHhcCC
Confidence            99999999999999999998766543322211   123579999999999988887 88888774     22 1111100


Q ss_pred             ---c------------cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceE
Q 009673          344 ---V------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLV  407 (529)
Q Consensus       344 ---~------------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~  407 (529)
                         .            .....++.. ....+++.+++.+...++.++.++..++++++.+.|++. |++++.+. ...++
T Consensus       329 ~~yl~~~~~~~~~~~~~~~~~~sr~-~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~-~~~iv  406 (475)
T 3k40_A          329 PLYLKHDMQGSAPDYRHWQIPLGRR-FRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEI-NMGLV  406 (475)
T ss_dssp             --------------------CCCGG-GTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCC-BTTEE
T ss_pred             ccccCCCcCCCCCCcccccccCCCc-ccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC-ceEEE
Confidence               0            001112211 123445556665555677889999999999999999984 99988653 34555


Q ss_pred             EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      .+.+...+....++.+.|.+.|+.+-.   |+  ...+...+|+++...   ..+++|++++++.|+++.+.
T Consensus       407 ~f~~~~~~~~~~~l~~~L~~~g~~~~~---~~--~~~g~~~lR~~~~~~---~tt~~di~~~~~~i~~~~~~  470 (475)
T 3k40_A          407 CFRLKGSNERNEALLKRINGRGHIHLV---PA--KIKDVYFLRMAICSR---FTQSEDMEYSWKEVSAAADE  470 (475)
T ss_dssp             EEEESSCHHHHHHHHHHHHHHTSCBCE---EE--EETTEEEEEEECCCT---TCCHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCchHHHHHHHHHHHhCCcEEEE---ee--EECCEEEEEEEeCCC---CCCHHHHHHHHHHHHHHHHH
Confidence            665543222235666777666654311   11  112346799986432   23589999999999988764

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=99.89  E-value=9.6e-22  Score=206.74  Aligned_cols=294  Identities=12%  Similarity=0.019  Sum_probs=191.8

Q ss_pred             HHHHHHcCCCCCCCceeeecCChH-HHHH--HHHHhhcC--C----------CCEEEEcCCCCCcccccccccccccccc
Q 009673          155 KRALAAFNLDENKWGVNVQPLSGS-PANF--EVYTAILK--P----------HDRIMGLDLPHGGHLSHGFMTPKRRVSG  219 (529)
Q Consensus       155 ~~la~~~g~~~~~~~~~V~~~sGs-~A~~--~~l~all~--p----------GD~Vl~~~~~~~g~~s~g~~~~~~~i~~  219 (529)
                      +.++++++++++    +|.+++|+ +++.  .++.++++  |          ||+|++.+|.|.++..        .+..
T Consensus        85 ~~ia~~~~~~~~----~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~--------~~~~  152 (427)
T 3ppl_A           85 QIWADLLGVPVE----QVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFS--------ITER  152 (427)
T ss_dssp             HHHHHHHTSCGG----GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHH--------HHHH
T ss_pred             HHHHHHhCCCcc----eEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHH--------HHHH
Confidence            567777888875    45567777 7883  77788877  7          9999999998765431        2344


Q ss_pred             ccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCCCC--CCCHH---HHHHHH-HHhCCEEEEeccccccc
Q 009673          220 TSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG-ASAYPR--DFDYP---RMRQIA-DAVGALLMMDMAHISGL  292 (529)
Q Consensus       220 ~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~-~s~~p~--~~d~~---~i~~ia-~~~g~~livD~ah~~Gl  292 (529)
                      .|.  ++++++++++ + +|+++|++.++..++++|++. +++||+  ..+.+   +|.++| ++||++||+|++|. ++
T Consensus       153 ~g~--~~~~v~~~~~-g-~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~-~~  227 (427)
T 3ppl_A          153 FGF--EMISVPMNED-G-PDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYA-VH  227 (427)
T ss_dssp             TTC--EEEEEEEETT-E-ECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTT-TC
T ss_pred             cCC--EEEEeCCCCC-C-CCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCc-cc
Confidence            554  6677777643 3 999999999964478999876 678886  55655   888888 99999999999854 33


Q ss_pred             ccccccCCC-----------CCcccEEEecccccc-cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHH
Q 009673          293 VAASVVADP-----------FKYCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGL  360 (529)
Q Consensus       293 i~~~~~~~~-----------~~~aDiv~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaal  360 (529)
                      .+.+....+           ....+++++|+||++ +|+|.||+++++      ++.+.+.........+.+...+.++ 
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~------~l~~~~~~~~~~~~~~~~~~~q~~~-  300 (427)
T 3ppl_A          228 TLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSA------ENRKWYTGHAGIRGIGPNKVNQLAH-  300 (427)
T ss_dssp             BSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCH------HHHHHHHHHHHHHCSCCCHHHHHHH-
T ss_pred             ccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCH------HHHHHHHHHhhcccCCCCHHHHHHH-
Confidence            322211111           113458899999974 688999999987      6766664432111122333333332 


Q ss_pred             HHHHHH--hcCchHHHHHHHHHHHHHHHHHHHHh----c-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEc
Q 009673          361 AVCLKH--AQSPEFKVYQNKVVSNCRALASRLVE----L-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN  433 (529)
Q Consensus       361 a~al~~--~~~~~~~~~~~~i~~~a~~l~~~L~~----~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~  433 (529)
                      +.+++.  .....+.+..+.+.++++.+.+.|.+    . ++.+..+ ...+++|+++...  +..++.+.|.++||.+.
T Consensus       301 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p-~~g~~~~~~~~~~--~~~~~~~~l~~~gv~v~  377 (427)
T 3ppl_A          301 ARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVP-AGGYFISLDVVPG--TASRVAELAKEAGIALT  377 (427)
T ss_dssp             HHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCC-SBSSCEEEECSTT--CHHHHHHHHHHTTEECC
T ss_pred             HHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCC-CccEEEEEECCcc--hHHHHHHHHHHCCCEEe
Confidence            223321  00122355566677777777777765    2 4665544 2356778887542  56778888999999995


Q ss_pred             C-CCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          434 K-NSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       434 ~-~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      . +...+......++++||++..     .+++++++.++.|.++++..
T Consensus       378 ~~g~~~~~~~~~~~~~~Ris~~~-----~~~~~i~~~~~~l~~~l~~~  420 (427)
T 3ppl_A          378 GAGSSYPLRQDPENKNLRLAPSL-----PPVEELEVAMDGVATCVLLA  420 (427)
T ss_dssp             CTTTTSGGGCCTTSCEEEECCSS-----SCHHHHHHHHHHHHHHHHHH
T ss_pred             cCcCcCCCCCCCCCCeEEEECCC-----CCHHHHHHHHHHHHHHHHHH
Confidence            4 211110001246789999743     25899999999999988754

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=99.82  E-value=5.3e-25  Score=228.95  Aligned_cols=336  Identities=14%  Similarity=0.116  Sum_probs=218.6

Q ss_pred             cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCChH
Q 009673          103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGS  178 (529)
Q Consensus       103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V~~~sGs  178 (529)
                      +.|+|..+++  .+++.+++++...+.+. ..+|+.       . ..++++...+++.+.+|.  +++    +|.+++|+
T Consensus        32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-------~-~~~l~~~la~~l~~~~g~~~~~~----~v~~~~g~   98 (392)
T 3b1d_A           32 QLLPAWIADMDFEVMPEVKQAIHDYAEQL-VYGYTY-------A-SDELLQAVLDWEKSEHQYSFDKE----DIVFVEGV   98 (392)
Confidence            4566766554  35788999998776432 122322       1 345666666777777784  443    45556665


Q ss_pred             -HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC--CCCCCHHHHHHHhhhcCCcEE
Q 009673          179 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAILFRPKLI  255 (529)
Q Consensus       179 -~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~--~~~iD~d~le~~i~~~~pklI  255 (529)
                       +|+..++.++++|||+|++.+|.|.++..        .+...|.  +++.++++++  ++.+|++++++.++..++++|
T Consensus        99 ~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v  168 (392)
T 3b1d_A           99 VPAISIAIQAFTKEGEAVLINSPVYPPFAR--------SVRLNNR--KLVSNSLKEENGLFQIDFEQLENDIVENDVKLY  168 (392)
Confidence             99999999999999999999988765431        2233443  5566666422  356899999999974478999


Q ss_pred             EEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC-------CcccEEEecccccc--cCCCC
Q 009673          256 IAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-------KYCDVVTTTTHKSL--RGPRG  321 (529)
Q Consensus       256 i~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-------~~aDiv~~S~hK~l--~Gprg  321 (529)
                      +++.++||+  ..   ++++|.++|+++|+++|+|++|.. +...+....++       ...++++.|+||++  +|+|.
T Consensus       169 ~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  247 (392)
T 3b1d_A          169 LLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQD-LTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKN  247 (392)
Confidence            888888876  32   589999999999999999999653 33322111111       12348889999997  67889


Q ss_pred             eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-c-CcEEec
Q 009673          322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-L-GYKLVS  399 (529)
Q Consensus       322 G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~-G~~v~~  399 (529)
                      |+++++++     ++.+.+.....+...++++....++...+|+.. ...+++..+++.++++.+.+.|++ . |+.+..
T Consensus       248 G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  321 (392)
T 3b1d_A          248 SYAIIENP-----TLCAQFKHQQLVNNHHEVSSLGYIATETAYRYG-KPWLVALKAVLEENIQFAVEYFAQEAPRLKVMK  321 (392)
Confidence            99998763     466666554333222233333333333455532 233467778888889999998876 3 776654


Q ss_pred             CCCCCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          400 GGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       400 ~gt~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      + ..+++.|+++...+.+..++.+.| +++||.+..+..++   +..++++||++.      .+++++++.++.|.++++
T Consensus       322 ~-~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~---~~~~~~iRi~~~------~~~e~i~~~l~~l~~~l~  391 (392)
T 3b1d_A          322 P-QGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYG---SEGELHARLNIA------APKSLVEEICKRIVCCLP  391 (392)
Confidence            3 224445677754334556676777 58999995432221   123568999854      236889888888877654

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=99.89  E-value=2e-22  Score=211.65  Aligned_cols=350  Identities=16%  Similarity=0.178  Sum_probs=213.3

Q ss_pred             hhcccCChH-HHHHHHHHHHHh-hcceeEecC---CC----CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHH
Q 009673           81 YSLGEADPE-VCEIITKEKERQ-FKSLELIAS---EN----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELET  151 (529)
Q Consensus        81 ~~l~~~d~~-~~~~~~~e~~~~-~~~i~L~as---en----~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~  151 (529)
                      +++...+++ ++.+........ .+.|+|..+   ++    ++++.|++++...+.+....+|+.   ..|   ..++++
T Consensus        26 ~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---~~g---~~~lr~   99 (420)
T 4f4e_A           26 SAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLP---IDG---IAAYDA   99 (420)
T ss_dssp             TTCCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCC---TTC---CHHHHH
T ss_pred             hcCCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCC---CCC---cHHHHH
Confidence            445666666 444444333222 367888877   32    234899999988776533334432   112   234444


Q ss_pred             HHHHHHHHHcCC--CCCCCceeeecCChH-HHHHHH--HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEE
Q 009673          152 LCQKRALAAFNL--DENKWGVNVQPLSGS-PANFEV--YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES  226 (529)
Q Consensus       152 ~a~~~la~~~g~--~~~~~~~~V~~~sGs-~A~~~~--l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~  226 (529)
                      ...+++....+.  +++.  ++|.+++|+ +|+..+  +.++++|||+|++++|.|.++..        .+...|.  ++
T Consensus       100 ~ia~~l~~~~~~~~~~~~--~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~--------~~~~~g~--~~  167 (420)
T 4f4e_A          100 SVQKLLLGDDSPLIAAGR--VVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRA--------LFDMAGF--EV  167 (420)
T ss_dssp             HHHHHHHCTTCHHHHTTC--EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHH--------HHHHTTC--CE
T ss_pred             HHHHHhcCCCccccccCc--eEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHH--------HHHHcCC--eE
Confidence            443444433321  2221  134556665 999888  56778999999999998765421        2334555  55


Q ss_pred             EEccc-CCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccc-
Q 009673          227 MPYRL-DESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-  297 (529)
Q Consensus       227 v~~~v-~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-  297 (529)
                      +.+++ +++++.+|++++++.++..  +++++++++++||+  ..   ++++|+++|+++|+++|+|++| .++...+. 
T Consensus       168 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y-~~~~~~~~~  246 (420)
T 4f4e_A          168 VAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAY-QGFGESIEA  246 (420)
T ss_dssp             EEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESC-TTSSSCTTG
T ss_pred             EEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccc-ccccCCcch
Confidence            56655 3356889999999999842  56888888899887  33   4778999999999999999995 45544321 


Q ss_pred             cCCCC------CcccEEEecccccc--cCCCCeEEEeeCCCcchhHHHh----hhcccccCCCCCCChHHHHHHHHHHHH
Q 009673          298 VADPF------KYCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELES----AINNAVFPGLQGGPHNHTIGGLAVCLK  365 (529)
Q Consensus       298 ~~~~~------~~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~----~i~~~~~p~~~g~p~~~~iaala~al~  365 (529)
                      ...++      ...+++++|+||++  +|+|.||+++..+.   .++.+    .+.........+.+...+. +++.++.
T Consensus       247 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~  322 (420)
T 4f4e_A          247 DAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDS---KDEAARVLSQLKRVIRTNYSNPPTHGGA-IVAAVLA  322 (420)
T ss_dssp             GGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSS---HHHHHHHHHHHHHHHHTTTSSCCSHHHH-HHHHHHH
T ss_pred             hhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCC---HHHHHHHHHHHHHHHhcccCCCCHHHHH-HHHHHhc
Confidence            00011      12458899999997  58899998752210   03332    2222111222223333222 2222333


Q ss_pred             Hh-----cCchHHHHHHHHHHHHHHHHHHHHhc----CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCC
Q 009673          366 HA-----QSPEFKVYQNKVVSNCRALASRLVEL----GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNS  436 (529)
Q Consensus       366 ~~-----~~~~~~~~~~~i~~~a~~l~~~L~~~----G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~  436 (529)
                      ..     .....++..+++.++++.+.+.|++.    |+.+..+. .+.+.|+++     +.+.+.++|+++||.+.   
T Consensus       323 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~~~~~~-----~~~~~~~~l~~~gI~v~---  393 (420)
T 4f4e_A          323 SPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQ-RGMFSYSGL-----TSAQVDRLREEFGIYAV---  393 (420)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHS-CSSEEECCC-----CHHHHHHHHHHHCEECC---
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCC-ccEEEEeCC-----CHHHHHHHHHhCCEEec---
Confidence            11     01234677888899999999999885    56554432 234445443     45778888999999983   


Q ss_pred             CCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          437 VPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       437 ~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                       |+         .||++..     +++++++++++.|++++
T Consensus       394 -~~---------~Ris~~~-----~~~~~i~~~~~~l~~~l  419 (420)
T 4f4e_A          394 -ST---------GRICVAA-----LNTRNLDVVANAIAAVL  419 (420)
T ss_dssp             -TT---------SEEEGGG-----CCTTTHHHHHHHHHHHH
T ss_pred             -CC---------CeEEEec-----CCHHHHHHHHHHHHHHh
Confidence             21         2888643     34688999999998875

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=99.89  E-value=7.6e-22  Score=209.22  Aligned_cols=331  Identities=17%  Similarity=0.169  Sum_probs=206.7

Q ss_pred             ceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHH
Q 009673          104 SLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN  181 (529)
Q Consensus       104 ~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~  181 (529)
                      .+++.++.+  .+++.+.+++... .+          .|...+...+++    +.+++++|.+.     .+.+++|++|+
T Consensus        44 ylD~~~~~~~~~~~~~~~~a~~~~-~~----------~y~~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~a~  103 (456)
T 2ez2_A           44 YIDLLTDSGTNAMSDKQWAGMMMG-DE----------AYAGSENFYHLE----RTVQELFGFKH-----IVPTHQGRGAE  103 (456)
T ss_dssp             SEECSCSSSCCCCCHHHHHHHTTC-CC----------CSSSCHHHHHHH----HHHHHHHCCSE-----EEEESSHHHHH
T ss_pred             eeeeccccCCccCCHHHHHHhhcc-hh----------hcccChhHHHHH----HHHHHHhCCCc-----EEEeCCcHHHH
Confidence            356555444  4578888888621 11          133334455555    67788888763     35567888999


Q ss_pred             HHHHHhhcCCCCEEEEcCCCC-CccccccccccccccccccceEEEEEcccCC----C-----CCCCCHHHHHHHhhhcC
Q 009673          182 FEVYTAILKPHDRIMGLDLPH-GGHLSHGFMTPKRRVSGTSIYFESMPYRLDE----S-----TGLVDYDMLEKTAILFR  251 (529)
Q Consensus       182 ~~~l~all~pGD~Vl~~~~~~-~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~----~-----~~~iD~d~le~~i~~~~  251 (529)
                      ..++.++++|||  +++++.| +...        ..+...|.  +++.+++++    +     ++.+|+++|++++++ +
T Consensus       104 ~~al~~l~~~gd--i~~~~~~~~~~~--------~~~~~~G~--~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~-~  170 (456)
T 2ez2_A          104 NLLSQLAIKPGQ--YVAGNMYFTTTR--------YHQEKNGA--VFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDE-K  170 (456)
T ss_dssp             HHHHHHHCCTTC--EEEESSCCHHHH--------HHHHHTTC--EEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHH-H
T ss_pred             HHHHHHhCCCCC--EeccccccchhH--------HHHHHcCC--EEEEecccccccccccccccCCCCHHHHHHHHHh-c
Confidence            999999999999  6667665 3211        13344564  666766652    2     268899999999987 4


Q ss_pred             C----cEEEEcCCCC-CC--CCC---HHHHHHHHHHhCCEEEEecccccc---------cccccccCC----CC-CcccE
Q 009673          252 P----KLIIAGASAY-PR--DFD---YPRMRQIADAVGALLMMDMAHISG---------LVAASVVAD----PF-KYCDV  307 (529)
Q Consensus       252 p----klIi~~~s~~-p~--~~d---~~~i~~ia~~~g~~livD~ah~~G---------li~~~~~~~----~~-~~aDi  307 (529)
                      +    ++|++++++| |+  ..+   +++|+++|++||++||+|++|..|         +...+....    .+ ...|+
T Consensus       171 t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~  250 (456)
T 2ez2_A          171 GAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADG  250 (456)
T ss_dssp             CGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSE
T ss_pred             cccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCE
Confidence            4    8888887776 54  455   999999999999999999998775         333332100    01 24688


Q ss_pred             EEecccccccCCCCeEEEeeCCCcchhHHHhhhccccc--CC--CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673          308 VTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVF--PG--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC  383 (529)
Q Consensus       308 v~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~--p~--~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a  383 (529)
                      +++|+||++..++||+++++++     ++.+.+.....  .+  ..++.+...+++++.++.....   +++.++..++.
T Consensus       251 ~~~S~kk~~~~~~gG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~---~~~~~~~~~~~  322 (456)
T 2ez2_A          251 CTMSGKKDCLVNIGGFLCMNDD-----EMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ---YEYIEHRVKQV  322 (456)
T ss_dssp             EEEETTTTTCCSSCEEEEESCH-----HHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC---HHHHHHHHHHH
T ss_pred             EEEeCcccCCCCceeEEEECCH-----HHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH---HHHHHHHHHHH
Confidence            8888999876567899998542     56554432111  01  1122233344443333332221   45667777788


Q ss_pred             HHHHHHHHhcCcEEecCCCCCceEEEccCC--CCCcHHHH-----HHhH-hcCCeEEcC-CC--CCC-----CCCCCCCC
Q 009673          384 RALASRLVELGYKLVSGGSDNHLVLVDLRP--MGIDGARV-----EKIL-DMASITLNK-NS--VPG-----DKSALVPG  447 (529)
Q Consensus       384 ~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~--~~i~~~~~-----~~~L-~~~GI~v~~-~~--~Pg-----~~~~~~~~  447 (529)
                      +.+.+.|.+.|++++.+. ..+++++++..  .+.+..++     .+.| +++||.+.. +.  .|.     .......+
T Consensus       323 ~~l~~~L~~~g~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~  401 (456)
T 2ez2_A          323 RYLGDKLKAAGVPIVEPV-GGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLE  401 (456)
T ss_dssp             HHHHHHHHHTTCCBCSSC-CSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCC
T ss_pred             HHHHHHHhcCCCccccCC-CceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCC
Confidence            889999988888766542 35666766521  23333333     5555 788997522 11  111     00011246


Q ss_pred             eEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          448 GIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       448 ~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      .|||+++..   ..+++|++++++.|++++..
T Consensus       402 ~iRis~~~~---~~t~e~i~~~~~~l~~~l~~  430 (456)
T 2ez2_A          402 TVRLTIPRR---VYTYAHMDVVADGIIKLYQH  430 (456)
T ss_dssp             EEEEECCTT---TCCHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEeCCC---CCCHHHHHHHHHHHHHHHhh
Confidence            899997642   14689999999999998764

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=99.89  E-value=2e-21  Score=198.46  Aligned_cols=313  Identities=13%  Similarity=0.116  Sum_probs=209.2

Q ss_pred             hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673          102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-  178 (529)
Q Consensus       102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-  178 (529)
                      +..|+|..++|+  +++.|++++...+. .+ .+|+..      .. .++    ++++++++|++++    +|.+++|+ 
T Consensus        15 ~~~id~~~~~~~~~~~~~v~~a~~~~~~-~~-~~y~~~------~~-~~l----r~~la~~~~~~~~----~i~~t~g~~   77 (350)
T 3fkd_A           15 SEIVNFSTTVWTDGDKDHLEKHLVENLN-CI-RHYPEP------DA-GTL----RQMLAKRNSVDNN----AILVTNGPT   77 (350)
T ss_dssp             -CCEECSCCSCCCSCCHHHHHHHHHTGG-GG-GSCCCT------TC-HHH----HHHHHHHTTCCGG----GEEEESHHH
T ss_pred             ccEEEccCCCCCCCCCHHHHHHHHHhHh-HH-hcCCCC------cH-HHH----HHHHHHHhCcCHH----HEEEcCCHH
Confidence            367888888764  58999999988773 22 234431      11 234    4778889998765    34556666 


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc-CCCCCCCCHHHHHHHhhhcCCcEEEE
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAILFRPKLIIA  257 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v-~~~~~~iD~d~le~~i~~~~pklIi~  257 (529)
                      +|+..++.++.  ||+|++.+|.|.+..        ..+...|.  +++.+++ +. ...+++        + ++++|++
T Consensus        78 ~al~~~~~~l~--gd~Vi~~~p~~~~~~--------~~~~~~g~--~~~~v~~~~~-~~~~~~--------~-~~~~v~i  135 (350)
T 3fkd_A           78 AAFYQIAQAFR--GSRSLIAIPSFAEYE--------DACRMYEH--EVCFYPSNED-IGEADF--------S-NMDFCWL  135 (350)
T ss_dssp             HHHHHHHHHTT--TCEEEEEESCCHHHH--------HHHHHTTC--EEEEEETTSC-GGGSCC--------T-TCSEEEE
T ss_pred             HHHHHHHHHHC--CCEEEEeCCCcHHHH--------HHHHHcCC--eEEEEecCCc-cccCcc--------C-CCCEEEE
Confidence            89998988887  999999998775442        12334555  6667666 43 223333        3 7999999


Q ss_pred             cCCCCCC--CCCHHHHHHHHHHhC-CEEEEecccccccccccccC-CCCC--cccEEEecccccc--cCCCCeEEEeeCC
Q 009673          258 GASAYPR--DFDYPRMRQIADAVG-ALLMMDMAHISGLVAASVVA-DPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKD  329 (529)
Q Consensus       258 ~~s~~p~--~~d~~~i~~ia~~~g-~~livD~ah~~Gli~~~~~~-~~~~--~aDiv~~S~hK~l--~GprgG~i~~~~~  329 (529)
                      ++++||+  ..+.+++.+|++.++ .+||+|++|. ++...+... ..++  ..+++++|+||++  +|.|.|++++++ 
T Consensus       136 ~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~-~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~-  213 (350)
T 3fkd_A          136 CNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYV-SFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANK-  213 (350)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTT-TSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCH-
T ss_pred             eCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchh-hhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCH-
Confidence            9899886  789999999999876 7999999964 333322111 1111  3458899999986  578899999976 


Q ss_pred             CcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEE
Q 009673          330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVL  408 (529)
Q Consensus       330 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~  408 (529)
                           ++.+.+.....++   +++....+++..+++..  ..+.+..++..++++.+.+.|++. |+.+..+  ..++++
T Consensus       214 -----~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~~~~  281 (350)
T 3fkd_A          214 -----DFMKRVAAFSTPW---AVNALAIEAAKFILIHP--AQFTLPIRKWQRNTVDFITALNRLDGVEVHPS--GTTFFL  281 (350)
T ss_dssp             -----HHHHHHHTTCCTT---CSCHHHHHHHHHHHHCT--TTTCCCHHHHHHHHHHHHHHHHHSTTEEECCC--SSSEEE
T ss_pred             -----HHHHHHHHhCCCC---CCCHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHHhcCCCcEECCC--CCcEEE
Confidence                 7877776544322   33444444444456532  223233344448889999999885 8887653  345556


Q ss_pred             EccCCCCCcHHHHHHhHhc-CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          409 VDLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       409 v~~~~~~i~~~~~~~~L~~-~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +.+...  +..++.+.|.+ +||.+..+...   +...+++|||++.       +++|++++.+.|++++..
T Consensus       282 ~~~~~~--~~~~l~~~L~~~~gi~v~~g~~f---~~~~~~~iRis~~-------~~~~~~~l~~al~~~~~~  341 (350)
T 3fkd_A          282 LRLKKG--TAAELKKYMLEEYNMLIRDASNF---RGLDESYVRITTQ-------RPAQNQLFIKALETFLEK  341 (350)
T ss_dssp             EEESSS--CHHHHHHHHHHTTCEECEECTTS---TTCCTTEEEEECC-------CHHHHHHHHHHHHHHHTC
T ss_pred             EECCCC--CHHHHHHHHHHHCCEEEEeCccC---CCCCCCEEEEEcC-------CHHHHHHHHHHHHHHHHH
Confidence            666532  66777777776 99999654322   2234678999863       478999999999887753

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=99.89  E-value=2.5e-21  Score=208.36  Aligned_cols=310  Identities=12%  Similarity=0.065  Sum_probs=196.4

Q ss_pred             hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC--------CC-----C-EEEEcCCCCCcccccc
Q 009673          144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--------PH-----D-RIMGLDLPHGGHLSHG  209 (529)
Q Consensus       144 ~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--------pG-----D-~Vl~~~~~~~g~~s~g  209 (529)
                      +...++|+.+.+++++++|++.+.- ..+..++||+||..++.++..        +|     | +|+++++.|.+..   
T Consensus       128 ~~~~~le~~~~~~la~~~g~~~~~~-~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~---  203 (504)
T 2okj_A          128 PVFVLMEQITLKKMREIVGWSSKDG-DGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIK---  203 (504)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCSSSC-EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHH---
T ss_pred             hHHHHHHHHHHHHHHHHhCCCCCCC-CEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHH---
Confidence            5567889888899999999983111 124445667999998888742        67     7 7888777665432   


Q ss_pred             ccccccccccccceE-EEEEcccCCCCCCCCHHHHHHHhhhc-----CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCE
Q 009673          210 FMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASAYPR--DFDYPRMRQIADAVGAL  281 (529)
Q Consensus       210 ~~~~~~~i~~~g~~~-~~v~~~v~~~~~~iD~d~le~~i~~~-----~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~  281 (529)
                           +.+...|.+. +++.++++ +++.+|+++|++++++.     +|++|+++.+++++  ..|+++|+++|++||+|
T Consensus       204 -----~~~~~~g~g~~~v~~v~~~-~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~  277 (504)
T 2okj_A          204 -----KAGAALGFGTDNVILIKCN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLW  277 (504)
T ss_dssp             -----HHHHHTTSCGGGEEEECBC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCE
T ss_pred             -----HHHHHcCCCcccEEEEecC-CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCE
Confidence                 1223334322 45556665 46899999999999763     48888888766654  78999999999999999


Q ss_pred             EEEecccccccccccccCCC---CCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCC---------
Q 009673          282 LMMDMAHISGLVAASVVADP---FKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGL---------  348 (529)
Q Consensus       282 livD~ah~~Gli~~~~~~~~---~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~---------  348 (529)
                      +++|++|..+..........   +.++|++++++||++.+|.+ |+++++++     ++.+.......+++         
T Consensus       278 lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~  352 (504)
T 2okj_A          278 LHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEK-----GILQGCNQMCAGYLFQPDKQYDV  352 (504)
T ss_dssp             EEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESST-----THHHHHHCCCCSSSCCSCCSSCG
T ss_pred             EEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECH-----HHHHHHhcCCCccccCCcccccC
Confidence            99999987665532211111   23689999999999987765 99999874     34332111101111         


Q ss_pred             ---------CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecC--CCCCceEEEccCCC--
Q 009673          349 ---------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSG--GSDNHLVLVDLRPM--  414 (529)
Q Consensus       349 ---------~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~--gt~~~~~~v~~~~~--  414 (529)
                               +++..... .+++.+++.+...++.++.++..++++++.+.|++ .|++++.+  ...+.+.+......  
T Consensus       353 ~~~~~~~~~~~~rr~~~-l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~  431 (504)
T 2okj_A          353 SYDTGDKAIQCGRHVDI-FKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLR  431 (504)
T ss_dssp             GGCCGGGSSCSSCBCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGS
T ss_pred             cCCcccCCCCCCCCccH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCcccc
Confidence                     11100011 12222333333356788889999999999999988 58998852  22223322222110  


Q ss_pred             CC------------cHHHHHHhHhcCCe-EEcCCCCCCCCCCCCCCeEEEccC-CCccCCCCHHHHHHHHHHHHHHHH
Q 009673          415 GI------------DGARVEKILDMASI-TLNKNSVPGDKSALVPGGIRIGSP-AMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       415 ~i------------~~~~~~~~L~~~GI-~v~~~~~Pg~~~~~~~~~iRig~~-~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +.            ....+.+.|.+.|+ .+......+     .++.+|+++. ..|    +++|++++++.|+++..
T Consensus       432 ~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~-----~~~~lRis~~~~~~----t~edi~~~~~~l~~~~~  500 (504)
T 2okj_A          432 GVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGD-----KANFFRMVISNPAA----TQSDIDFLIEEIERLGQ  500 (504)
T ss_dssp             SCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETT-----EEEEEEECCCCTTC----CHHHHHHHHHHHHHHHT
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECC-----ceEEEEEEeCCCCC----CHHHHHHHHHHHHHHHH
Confidence            10            02356667777785 443211111     1257999974 444    48999999999987654

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=99.89  E-value=1.8e-21  Score=209.01  Aligned_cols=334  Identities=12%  Similarity=0.028  Sum_probs=212.1

Q ss_pred             CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh---
Q 009673          112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---  188 (529)
Q Consensus       112 n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al---  188 (529)
                      ..+++.+++++.....+...      ..|...+...++|+.+++++++++|++....  .+..++|++||..++.++   
T Consensus       110 ~~~~~~v~~~~~~~~~n~~~------~~~~~~~~~~~le~~~~~~la~~~g~~~~~~--~~~t~ggt~a~~~al~~ar~~  181 (497)
T 2qma_A          110 PPLMPAVAAEAMIAALNQSM------DSWDQASSATYVEQKVVNWLCDKYDLSEKAD--GIFTSGGTQSNQMGLMLARDW  181 (497)
T ss_dssp             CCBHHHHHHHHHHHHHCCCT------TCGGGCHHHHHHHHHHHHHHHHHTTCCTTCE--EEEESSHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHhhcccc------cchhhChHHHHHHHHHHHHHHHHhCCCCCCC--eEEcCCchHHHHHHHHHHHHH
Confidence            35688888888655543211      1133335678899999999999999975222  344566779999888773   


Q ss_pred             -c---------CC------CC-EEEEcCCCCCccccccccccccccccccceE-EEEEcccCCCCCCCCHHHHHHHhhhc
Q 009673          189 -L---------KP------HD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDMLEKTAILF  250 (529)
Q Consensus       189 -l---------~p------GD-~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~-~~v~~~v~~~~~~iD~d~le~~i~~~  250 (529)
                       +         ++      || .|++.++.|.+..        +.+...|.+. +++.++++ +++.+|+++|++.+++.
T Consensus       182 ~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~--------~~~~~~g~g~~~v~~v~~~-~~~~~d~~~L~~~i~~~  252 (497)
T 2qma_A          182 IADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQ--------KSASWMGLGEKAVMTVDAN-ADGTMDITKLDEVIAQA  252 (497)
T ss_dssp             HHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHH--------HHHHHTTSCGGGEEEECBC-TTSSBCGGGHHHHHHHH
T ss_pred             HHHhhcccchhhcccccccCCeEEEECCCchHHHH--------HHHHHcCCCcccEEEEecC-CCCcCCHHHHHHHHHHH
Confidence             3         13      46 7888777665432        1223333322 35556666 46899999999999763


Q ss_pred             ---C--CcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccccccccc--CCCCCcccEEEecccccccCCCC
Q 009673          251 ---R--PKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFKYCDVVTTTTHKSLRGPRG  321 (529)
Q Consensus       251 ---~--pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~~aDiv~~S~hK~l~Gprg  321 (529)
                         .  |.+|+++.+++++  ..|+++|+++|++||+|+++|++|..+....+..  ...++.+|++++|+|||+.+|.+
T Consensus       253 ~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~~  332 (497)
T 2qma_A          253 KAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQTIS  332 (497)
T ss_dssp             HHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCSS
T ss_pred             HHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCCcc
Confidence               2  3367776555543  7899999999999999999999987665433311  01123679999999999987765


Q ss_pred             -eEEEeeCCCcchhHHHhhhcccccCCCCC----CChHHH----------HHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 009673          322 -GMIFFKKDPVLGVELESAINNAVFPGLQG----GPHNHT----------IGGLAVCLKHAQSPEFKVYQNKVVSNCRAL  386 (529)
Q Consensus       322 -G~i~~~~~~~~~~~l~~~i~~~~~p~~~g----~p~~~~----------iaala~al~~~~~~~~~~~~~~i~~~a~~l  386 (529)
                       |+++++++     ...+.+... ..++.+    .++...          ..++..+++.+...++.++.++..++++++
T Consensus       333 ~G~l~~~~~-----~~~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l  406 (497)
T 2qma_A          333 CGALLVNDK-----SNFKFLLHH-ADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEV  406 (497)
T ss_dssp             CEEEEESCG-----GGGGGGCC---------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeCH-----HHHHHhcCC-chhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence             99998774     323333211 011100    111111          123344566555456788889999999999


Q ss_pred             HHHHHh-cCcEEecCCCCCceEEEccCCCCCcH----HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEcc-CCCccCC
Q 009673          387 ASRLVE-LGYKLVSGGSDNHLVLVDLRPMGIDG----ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS-PAMTTRG  460 (529)
Q Consensus       387 ~~~L~~-~G~~v~~~gt~~~~~~v~~~~~~i~~----~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~-~~~tt~g  460 (529)
                      .+.|++ .|++++.+. ...++.+.+.+.+.+.    ..+.+.|.+.|+.+.....+     ...+.+|+++ +..+   
T Consensus       407 ~~~L~~~~~~~~~~~~-~~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~-----~g~~~lRis~~~~~~---  477 (497)
T 2qma_A          407 ADMIRTNDQFELLAEP-SLSTVLFRATHETADLDELNKALRLEALTRGIAVLGETIV-----DGKTALKFTILNPCL---  477 (497)
T ss_dssp             HHHHHTCTTEEECSCC-SSSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEE-----TTEEEEEEECCCTTC---
T ss_pred             HHHHhhCCCeEEEcCC-CceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeEE-----CCEEEEEEEecCCCC---
Confidence            999998 489886542 2345555554332221    34556777789877321111     1235799987 4443   


Q ss_pred             CCHHHHHHHHHHHHHHHH
Q 009673          461 FSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       461 ~~~~d~~~la~~i~~~~~  478 (529)
                       +++|++++.+.|++++.
T Consensus       478 -t~edi~~~~~~l~~~~~  494 (497)
T 2qma_A          478 -TTSDFESLLSKINMLAV  494 (497)
T ss_dssp             -CHHHHHHHHHHHHHHHH
T ss_pred             -CHHHHHHHHHHHHHHHH
Confidence             58999999999988764

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=99.89  E-value=1e-21  Score=205.44  Aligned_cols=347  Identities=16%  Similarity=0.158  Sum_probs=213.4

Q ss_pred             hhcccCChH-HHHHHHHHHHHh-hcceeEecCC----C---CCcHHHHHHHhhhh-hccCCCCCCCCCCCCCchhHHHHH
Q 009673           81 YSLGEADPE-VCEIITKEKERQ-FKSLELIASE----N---FTSRAVMEAVGSCL-TNKYSEGLPGKRYYGGNEYIDELE  150 (529)
Q Consensus        81 ~~l~~~d~~-~~~~~~~e~~~~-~~~i~L~ase----n---~~~~~V~eal~~~l-~~~y~~G~p~~r~~~g~~~~d~lE  150 (529)
                      ..+....++ ++.+.+...... .+.|+|..++    +   ++++.|.+|+. .+ ......+|..   ..|   ..++.
T Consensus         6 ~~~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~---~~G---~~~lr   78 (405)
T 3k7y_A            6 SSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLL---GNG---TEDFS   78 (405)
T ss_dssp             GGCCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCT---TSS---CHHHH
T ss_pred             hcCCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCC---CCC---cHHHH
Confidence            346666665 555554433222 3668998764    2   35789999876 33 2222223432   123   23566


Q ss_pred             HHHHHHHHHHcCCCC-CCCceeeecCChH-HHHHHHHHhhcC--CCCEEEEcCCCCCccccccccccccccccccceEEE
Q 009673          151 TLCQKRALAAFNLDE-NKWGVNVQPLSGS-PANFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES  226 (529)
Q Consensus       151 ~~a~~~la~~~g~~~-~~~~~~V~~~sGs-~A~~~~l~all~--pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~  226 (529)
                      +.+.+++.+..+... +++ ++|..|+|+ +|+..++.++++  | |+|++++|.|.++.        ..+...|.  ++
T Consensus        79 ~aia~~~~~~~~~~~~~~~-i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~--------~~~~~~g~--~~  146 (405)
T 3k7y_A           79 TLTQNLIFGNNSKYIEDKK-ICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHV--------NMIESRGF--NL  146 (405)
T ss_dssp             HHHHHHHHCSSCTTTTTTC-EEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHH--------HHHHTTTC--EE
T ss_pred             HHHHHHHcCCCCccccccc-eEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHH--------HHHHHcCC--eE
Confidence            555566655444331 112 234456666 999999988877  9 99999999876553        13445665  67


Q ss_pred             EEccc-CCCCCCCCHHHHHHHhhhc-CCcEEEEcCC-CCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccccc
Q 009673          227 MPYRL-DESTGLVDYDMLEKTAILF-RPKLIIAGAS-AYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVV  298 (529)
Q Consensus       227 v~~~v-~~~~~~iD~d~le~~i~~~-~pklIi~~~s-~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~  298 (529)
                      +.+++ +++++.+|++++++.+++. ++++|+++.+ +||+  ..   .+++|.++|++||+++|+|++ |.++.+.+..
T Consensus       147 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~-Y~~l~~~~~~  225 (405)
T 3k7y_A          147 KYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIA-YQGFGHTNLE  225 (405)
T ss_dssp             EEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEES-CTTTSSSSTT
T ss_pred             EEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecC-cccccCCCcc
Confidence            77776 4446899999999999753 4578888765 7997  33   477888999999999999998 4555543211


Q ss_pred             --CCC---C-C-c-ccEEEecccccc--cCCCCeEEEee--CCCcchhHHHhhh----cccccCCCCCCChHHHHHHHHH
Q 009673          299 --ADP---F-K-Y-CDVVTTTTHKSL--RGPRGGMIFFK--KDPVLGVELESAI----NNAVFPGLQGGPHNHTIGGLAV  362 (529)
Q Consensus       299 --~~~---~-~-~-aDiv~~S~hK~l--~GprgG~i~~~--~~~~~~~~l~~~i----~~~~~p~~~g~p~~~~iaala~  362 (529)
                        ..+   + . + --+++.|++|++  +|+|.||+++.  +.     ++.+++    .......+. .++.....+++.
T Consensus       226 ~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~-~~~~~~q~~~~~  299 (405)
T 3k7y_A          226 EDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQ-----EEKKIVFNNLCFIVRKFYS-SPVIHTNRILCQ  299 (405)
T ss_dssp             GGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSH-----HHHHHHHHHHHHHHHTTTS-SCCHHHHHHHHH
T ss_pred             cchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEEEeCCH-----HHHHHHHHHHHHHHhcccC-CCcHHHHHHHHH
Confidence              001   1 1 1 227889999986  69999998652  21     443332    221111122 222222222233


Q ss_pred             HHHHh--c---CchHHHHHHHHHHHHHHHHHHHH----hcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCC
Q 009673          363 CLKHA--Q---SPEFKVYQNKVVSNCRALASRLV----ELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAS  429 (529)
Q Consensus       363 al~~~--~---~~~~~~~~~~i~~~a~~l~~~L~----~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~G  429 (529)
                      ++..-  .   ..+.+.+++++.++++.+.+.|+    +.|    +.+..+ ..++++|+.+.     .+.+. .|+++|
T Consensus       300 ~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p-~gg~f~~~~l~-----~~~~~-~L~~~g  372 (405)
T 3k7y_A          300 LLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKK-QRGLFSFVPLL-----AKIAE-HLKTHH  372 (405)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSS-CCSSEEECGGG-----GGGTT-TTTTTT
T ss_pred             HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccC-CceEEEecCCC-----HHHHH-HHHHCC
Confidence            34320  0   12235667778999999999999    766    454443 23456666553     23343 458899


Q ss_pred             eEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          430 ITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       430 I~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      |.+    +||        + ||++..     .++++++++++.|+++++
T Consensus       373 V~v----~p~--------~-Ris~a~-----~~~~~i~~~~~~i~~~~~  403 (405)
T 3k7y_A          373 IYI----INN--------G-RINVSG-----ITKNNVDYIADKICLSLS  403 (405)
T ss_dssp             EEC----CTT--------S-EEEGGG-----CCTTHHHHHHHHHHHHHH
T ss_pred             Eee----cCC--------C-eEEEec-----cCHHHHHHHHHHHHHHHh
Confidence            998    442        2 988643     457999999999998875

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.88  E-value=1.1e-22  Score=215.61  Aligned_cols=280  Identities=14%  Similarity=0.140  Sum_probs=183.7

Q ss_pred             HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673          153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL  231 (529)
Q Consensus       153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v  231 (529)
                      +++++++ +|.+.     .+.+++|+ +|+.+++.++++|||+|+++.+.|.+...        .+...|.  +++.++.
T Consensus        62 ~~~~la~-~g~~~-----~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~--------~~~~~G~--~~~~v~~  125 (446)
T 2x3l_A           62 SMKQVEK-HSDYD-----GYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLH--------ALDISQQ--EGHFIET  125 (446)
T ss_dssp             HHHHHCS-CTTEE-----EEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHH--------HHHHHTC--CEEECEE
T ss_pred             HHHHHHh-cCCCc-----eEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHH--------HHHHcCC--eEEEEeC
Confidence            3478889 99872     34557776 99999999999999999999988765431        2334554  4555555


Q ss_pred             --CCCC---CCCCHHHHHHHhhhcCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCC-C-
Q 009673          232 --DEST---GLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K-  303 (529)
Q Consensus       232 --~~~~---~~iD~d~le~~i~~~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-~-  303 (529)
                        +++.   +.+|+++|   +.+ ++++|+++++++.+ ..|+++|.++|++||+++++|++|...+.+.+. +... . 
T Consensus       126 ~~~~~~~~~~~~d~~~l---~~~-~~~~v~~~~~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~~~~  200 (446)
T 2x3l_A          126 HQSPLTNHYNKVNLSRL---NND-GHKLVVLTYPNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDSTLNY  200 (446)
T ss_dssp             EECTTTSSEEEEEC-----------CCEEEEESSCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCGGGG
T ss_pred             eeccccCcCCCCCHHHH---cCC-CceEEEEECCCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCChHHc
Confidence              4221   46788887   444 78999888766544 789999999999999999999998763322222 2111 2 


Q ss_pred             cccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 009673          304 YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN  382 (529)
Q Consensus       304 ~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~  382 (529)
                      ++|++++|+||++.|+.+ |+++++++..   + ...+.........++++...++++..+++.+...+.+++.++..++
T Consensus       201 g~Di~~~S~~K~l~~~~g~g~l~~~~~~i---~-~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l  276 (446)
T 2x3l_A          201 QADYVVQSFHKTLPALTMGSVLYIHKNAP---Y-RENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQL  276 (446)
T ss_dssp             TCSEEEECHHHHSSSCTTCEEEEEETTCT---T-HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred             CCCEEEECCccccccccccEEEEEcCCcC---C-HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            589999999999877755 9999988421   1 1122211111124567777777777676655432323355555555


Q ss_pred             HHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCC
Q 009673          383 CRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS  462 (529)
Q Consensus       383 a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~  462 (529)
                      ++.+.+.    |++++.+. +...+++++.  ++++.++.+.|.+.||.+..   +|      .+.+|++++..+    +
T Consensus       277 ~~~l~~~----g~~~~~~~-~~~~l~i~~~--~~~~~~l~~~L~~~GI~v~~---~g------~~~iRi~~~~~~----t  336 (446)
T 2x3l_A          277 IECLENK----GFEMLQVD-DPLKLLIKYE--GFTGHDIQNWFMNAHIYLEL---AD------DYQALAILPLWH----H  336 (446)
T ss_dssp             HHHHHHH----TCEEEECS-STTEEEEECT--TSCHHHHHHHHHHTTEEESE---EC------SSCEEEECCCCC----T
T ss_pred             HHHHHHc----CCEECcCC-CCeEEEEEeC--CcCHHHHHHHHHHCCCEEEe---cC------CCEEEEEeecCC----C
Confidence            5554444    88887642 3334666664  56788888888888999952   22      367999976543    4


Q ss_pred             HHHHHHHHHHHHHHHH
Q 009673          463 EKEFVAIADFIHEGVE  478 (529)
Q Consensus       463 ~~d~~~la~~i~~~~~  478 (529)
                      ++|+ ++++.|+++++
T Consensus       337 ~e~i-~l~~aL~~~~~  351 (446)
T 2x3l_A          337 DDTY-LFDSLLRKIED  351 (446)
T ss_dssp             TCCC-CHHHHHHHHHT
T ss_pred             HHHH-HHHHHHHHHHH
Confidence            6889 99998888764

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.88  E-value=2.3e-21  Score=202.26  Aligned_cols=321  Identities=16%  Similarity=0.176  Sum_probs=196.4

Q ss_pred             eEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHH
Q 009673          106 ELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY  185 (529)
Q Consensus       106 ~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l  185 (529)
                      ....+.+++.+.+.+++.. +.+. ..+|...|+  +++..++++    +++++++|.+.     .+.++||++|+..++
T Consensus        31 p~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~r~--~~~~~~~l~----~~la~~~g~~~-----~i~~~sG~~a~~~~l   97 (398)
T 1gc0_A           31 PVYQTATFTFPTVEYGAAC-FAGE-QAGHFYSRI--SNPTLNLLE----ARMASLEGGEA-----GLALASGMGAITSTL   97 (398)
T ss_dssp             CBCCCSCBCCC-------------------------CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHH
T ss_pred             CccCCCccccCCHHHHHHh-hcCC-cCCCcccCC--CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHH
Confidence            3445666777777777642 2222 122322222  345555555    77888999862     466799999999999


Q ss_pred             HhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-
Q 009673          186 TAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-  264 (529)
Q Consensus       186 ~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-  264 (529)
                      .++++|||+|+++++.|+++.....    ......|.  +++.++.      .|++++++.+++ ++++|++++++||+ 
T Consensus        98 ~~~~~~gd~vl~~~~~~~~~~~~~~----~~~~~~g~--~~~~~~~------~d~~~l~~~i~~-~~~~v~~~~~~nptG  164 (398)
T 1gc0_A           98 WTLLRPGDEVLLGNTLYGCTFAFLH----HGIGEFGV--KLRHVDM------ADLQALEAAMTP-ATRVIYFESPANPNM  164 (398)
T ss_dssp             HHHCCTTCEEEEESSCCSHHHHHHH----HTGGGGTC--EEEEECT------TCHHHHHHHCCT-TEEEEEEESSCTTTC
T ss_pred             HHHhcCCCEEEEeCCCchhHHHHHH----HHHHHcCC--EEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCCCc
Confidence            9999999999999998876542110    00123343  5555543      389999999987 89999999888875 


Q ss_pred             -CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHh-
Q 009673          265 -DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELES-  338 (529)
Q Consensus       265 -~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~-  338 (529)
                       ..|+++|.++|+++|+++|+|++|..+...     .++. ++|+++.|+||++.||.   +|++++++      ++.. 
T Consensus       165 ~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~-----~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~------~~~~~  233 (398)
T 1gc0_A          165 HMADIAGVAKIARKHGATVVVDNTYCTPYLQ-----RPLELGADLVVHSATKYLSGHGDITAGIVVGSQ------ALVDR  233 (398)
T ss_dssp             CCCCHHHHHHHHGGGTCEEEEECTTTHHHHC-----CGGGGTCSEEEEETTTTTTCSSSCCCEEEEECH------HHHHH
T ss_pred             ccccHHHHHHHHHHcCCEEEEECCCcccccC-----CchhhCceEEEECCccccCCCCCCeEEEEEECh------HHHHH
Confidence             779999999999999999999998766532     1222 58999999999997664   59999887      4333 


Q ss_pred             hhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcE--------------EecC--C
Q 009673          339 AINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYK--------------LVSG--G  401 (529)
Q Consensus       339 ~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~--------------v~~~--g  401 (529)
                      .+.........++.+....+++..+++     .+..+.++..++++.+.+.|.+. ++.              +..+  .
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~  308 (398)
T 1gc0_A          234 IRLQGLKDMTGAVLSPHDAALLMRGIK-----TLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMS  308 (398)
T ss_dssp             HHHTHHHHHTCCCCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------
T ss_pred             HHHHHhhccCCCCCCHHHHHHHHhccc-----hHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCC
Confidence            443322110122333333332222332     34566778888999999999873 222              1111  0


Q ss_pred             CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC---------------C-------CCCCCeEEEccCCCccC
Q 009673          402 SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK---------------S-------ALVPGGIRIGSPAMTTR  459 (529)
Q Consensus       402 t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~---------------~-------~~~~~~iRig~~~~tt~  459 (529)
                      ...+++.+.+..   +.+.+.++|++.||.+...+. |+.               +       ...++.|||++...+  
T Consensus       309 ~~~~~~~~~l~~---~~~~~~~~l~~~~i~~~~~s~-G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~--  382 (398)
T 1gc0_A          309 QPGGMIAFELKG---GIGAGRRFMNALQLFSRAVSL-GDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLED--  382 (398)
T ss_dssp             CCTTEEEEEETT---HHHHHHHHHHHCSSSEECSCC-SCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSC--
T ss_pred             CCceEEEEEECC---CHHHHHHHHHhCCCceeccCC-CCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCC--
Confidence            124455555532   235677888888877643111 100               0       012478999987543  


Q ss_pred             CCCHHHHHHHHHHHHHH
Q 009673          460 GFSEKEFVAIADFIHEG  476 (529)
Q Consensus       460 g~~~~d~~~la~~i~~~  476 (529)
                        ++++++.+.++|+++
T Consensus       383 --~~~~i~~l~~al~~~  397 (398)
T 1gc0_A          383 --IDDLLADVQQALKAS  397 (398)
T ss_dssp             --HHHHHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHHHhc
Confidence              478888888887653

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=99.88  E-value=6e-22  Score=201.41  Aligned_cols=302  Identities=16%  Similarity=0.135  Sum_probs=205.0

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC---CCCCCCceeeecCCh
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN---LDENKWGVNVQPLSG  177 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g---~~~~~~~~~V~~~sG  177 (529)
                      ..|+|..+++.  +++.|++++...+...-..+|+..    +   ..+++    +.++++++   ++++    +|.+++|
T Consensus        20 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~----~---~~~lr----~~la~~~~~~~~~~~----~v~~~~G   84 (335)
T 1uu1_A           20 DKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDS----P---DEELI----EKILSYLDTDFLSKN----NVSVGNG   84 (335)
T ss_dssp             CSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCCS----S---CHHHH----HHHHHHHTCSSCCGG----GEEEESS
T ss_pred             cceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC----c---hHHHH----HHHHHHcCCCCCCHH----HEEEcCC
Confidence            45888887773  589999999887632112233321    1   23444    66777888   6654    3555666


Q ss_pred             H-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673          178 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII  256 (529)
Q Consensus       178 s-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi  256 (529)
                      + +++..++.++   ||+|+++ |.|.++..        .+...|.  +++.++++ +++.+|++++     + ++++|+
T Consensus        85 ~~~al~~~~~~~---gd~Vl~~-p~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l-----~-~~~~v~  143 (335)
T 1uu1_A           85 ADEIIYVMMLMF---DRSVFFP-PTYSCYRI--------FAKAVGA--KFLEVPLT-KDLRIPEVNV-----G-EGDVVF  143 (335)
T ss_dssp             HHHHHHHHHHHS---SEEEECS-SSCHHHHH--------HHHHHTC--EEEECCCC-TTSCCCCCCC-----C-TTEEEE
T ss_pred             hHHHHHHHHHHh---CCcEEEC-CCcHHHHH--------HHHHcCC--eEEEeccC-CCCCCCHHHc-----C-CCCEEE
Confidence            5 8998888888   9999999 87754321        2233454  66777775 3467888776     3 789999


Q ss_pred             EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccc--cCCCCeEEEeeCCC
Q 009673          257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDP  330 (529)
Q Consensus       257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l--~GprgG~i~~~~~~  330 (529)
                      ++.|+||+  ..+.+++.++++.+| ++|+|++|.. +....... .++  ..+++++|+||++  +|+|.|++++++  
T Consensus       144 l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~-~~~~~~~~-~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--  218 (335)
T 1uu1_A          144 IPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYE-FHGESYVD-FLKKYENLAVIRTFSKAFSLAAQRVGYVVASE--  218 (335)
T ss_dssp             EESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHH-HHCCCCGG-GGGTCSSEEEEEESTTTTTCGGGCCEEEEECH--
T ss_pred             EeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchh-hcchhHHH-HhhhCCCEEEEecchhhcCCcccCeEEEEeCH--
Confidence            88888886  789999999999889 9999999763 22111010 011  3568999999997  577889999976  


Q ss_pred             cchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEc
Q 009673          331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVD  410 (529)
Q Consensus       331 ~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~  410 (529)
                          ++.+.+.....++   +++....+++..+++.  ...+++..+++.++++++.+.|.+.|+.+..+  ...+++++
T Consensus       219 ----~~~~~l~~~~~~~---~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~~~~~  287 (335)
T 1uu1_A          219 ----KFIDAYNRVRLPF---NVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREMGYRITDS--RGNFVFVF  287 (335)
T ss_dssp             ----HHHHHHHHHSCTT---CSCHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC--CSSEEEEE
T ss_pred             ----HHHHHHHHhcCCC---CcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHCCcEEcCC--CCeEEEEE
Confidence                6777665543322   3344445555555653  12457778888999999999998878776433  24556777


Q ss_pred             cCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          411 LRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       411 ~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      +..  .+..++.+.|.++||.+..          .++++||++.       +++|++++++.|++
T Consensus       288 ~~~--~~~~~~~~~l~~~gi~v~~----------~~~~iRis~~-------~~~~i~~~~~~l~~  333 (335)
T 1uu1_A          288 MEK--EEKERLLEHLRTKNVAVRS----------FREGVRITIG-------KREENDMILRELEV  333 (335)
T ss_dssp             CCT--HHHHHHHHHHHHHTEEEEE----------ETTEEEEECC-------CHHHHHHHHHHHHC
T ss_pred             CCC--CCHHHHHHHHHHCCEEEEE----------CCCeEEEEeC-------CHHHHHHHHHHHHh
Confidence            643  3456677788788999954          2468999963       25788888888765

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.88  E-value=6.2e-22  Score=210.45  Aligned_cols=335  Identities=12%  Similarity=0.097  Sum_probs=206.9

Q ss_pred             CCCCcHHHHHHHhhhhhccCCCCCC-CCCCC------CCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHH
Q 009673          111 ENFTSRAVMEAVGSCLTNKYSEGLP-GKRYY------GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANF  182 (529)
Q Consensus       111 en~~~~~V~eal~~~l~~~y~~G~p-~~r~~------~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~  182 (529)
                      ..+.++.|.+++.......|..+.. ...+.      .+.+...++++.+++++++++|++.+    .+...+|+ .+|.
T Consensus        89 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~----~~~t~g~te~a~~  164 (456)
T 2z67_A           89 IGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQPKASGASIMYALTNKILESFFKQLGLNVH----AIATPISTGMSIS  164 (456)
T ss_dssp             CSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCTTBHHHHHHHHHHHHHHHHHHHHTTCCCE----EEEESSCHHHHHH
T ss_pred             cccccccccccccCccccccCCCccHHHHHHhhCcccccCcHHHHHHHHHHHHHHHHcCCCCC----EEEeCcHHHHHHH
Confidence            3466777888776543222221111 00111      11122566777889999999999863    13345556 5677


Q ss_pred             HHHHhhcC--CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC--CCCCCCCHHHHHHHh-hh---cCCcE
Q 009673          183 EVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD--ESTGLVDYDMLEKTA-IL---FRPKL  254 (529)
Q Consensus       183 ~~l~all~--pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~--~~~~~iD~d~le~~i-~~---~~pkl  254 (529)
                      .++.++..  +||.|++++++|.+..        +.+...|.  +++.+++.  .+++.+|+++|++++ ++   .++.+
T Consensus       165 ~al~~~~~~~~~~~vi~~~~~h~s~~--------~~~~~~G~--~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~  234 (456)
T 2z67_A          165 LCLSAARKKYGSNVVIYPYASHKSPI--------KAVSFVGM--NMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPC  234 (456)
T ss_dssp             HHHHHHHHHHCCCEEEEECCCCHHHH--------HHHHHTTC--EEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEE
T ss_pred             HHHHHHHHhcCCCEEEEECCCcHHHH--------HHHHHcCC--CceEEEEeccCCCCCcCHHHHHHHHHHHhhCCCeEE
Confidence            66766543  7888998888775432        23344565  45444442  246899999999999 42   36777


Q ss_pred             EEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccc---cccccCCCCCcccEEEecccccccCCCC-eEEEeeC
Q 009673          255 IIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLV---AASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKK  328 (529)
Q Consensus       255 Ii~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli---~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~  328 (529)
                      |++..++|++  ..|+++|.++|+++|+++++|+||.....   ..+...... ++|++++|+||++.||.| |++++++
T Consensus       235 vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~-~~D~~~~s~hK~~~~p~g~G~l~~~~  313 (456)
T 2z67_A          235 VLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY-RVDAVVSSSDKNLLTPIGGGLVYSTD  313 (456)
T ss_dssp             EEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS-CCSEEEEEHHHHHCCCSSCEEEEESC
T ss_pred             EEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCC-CCCEEEEcCCCCcCCCCCeEEEEEcC
Confidence            7777776654  78999999999999999999988653322   111100011 589999999999877665 9999965


Q ss_pred             CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----CcEEecCCCCC
Q 009673          329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----GYKLVSGGSDN  404 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~----G~~v~~~gt~~  404 (529)
                      +     ++.+.+... +.+...  .. ...++..++..+...++++..++..++++++.+.|++.    |+.++.+.   
T Consensus       314 ~-----~~~~~l~~~-~~g~~~--~~-~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~~~---  381 (456)
T 2z67_A          314 A-----EFIKEISLS-YPGRAS--AT-PVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDVE---  381 (456)
T ss_dssp             H-----HHHHHHHTT-SCSCBC--SH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCCCC---
T ss_pred             H-----HHHhhcCcC-CCCCCC--CC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCEecCCC---
Confidence            3     566666432 222211  11 23334445554444567888899999999999999885    87666542   


Q ss_pred             ceEEEccCCCCCcHHHHHHhHhcCCe---EEcCCC--CCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          405 HLVLVDLRPMGIDGARVEKILDMASI---TLNKNS--VPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       405 ~~~~v~~~~~~i~~~~~~~~L~~~GI---~v~~~~--~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      .++++++...+. ..++.+.|.+.||   .+....  .+|.. .....+++|+++..    +.+++|++++++.|++++
T Consensus       382 ~~v~~~~~~~~~-~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~----~~t~eeid~~l~~L~~~~  455 (456)
T 2z67_A          382 SPIASCISVNSD-PVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAI----GVRTEDIVNSVSKLEKIL  455 (456)
T ss_dssp             CSSEEEEECSSC-HHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCT----TCCHHHHHHHHHHHHTC-
T ss_pred             CeEEEEEecccH-HHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhc----CCCHHHHHHHHHHHHHHh
Confidence            344555521121 3567777877775   332000  00110 01124689998654    345899999999987654

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=99.88  E-value=2.3e-21  Score=210.07  Aligned_cols=340  Identities=14%  Similarity=0.144  Sum_probs=207.9

Q ss_pred             eeEecCCC-CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc-C-CCCCCCceeeecCChH-HH
Q 009673          105 LELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF-N-LDENKWGVNVQPLSGS-PA  180 (529)
Q Consensus       105 i~L~asen-~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~-g-~~~~~~~~~V~~~sGs-~A  180 (529)
                      |+|..++. ..++.+++++...+..   .+|+     .......++++.+.+++.+.+ + ++.+.. .+|.+++|+ +|
T Consensus       106 i~l~~g~~~~~~~~~v~a~~~~~~~---~~y~-----~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~~i~~t~G~t~a  176 (533)
T 3f6t_A          106 VNYCHTELGLNRDKVVAEWVNGAVA---NNYP-----VPDRCLVNTEKIINYFLQELSYKDANLAEQ-TDLFPTEGGTAA  176 (533)
T ss_dssp             HHHHHHTTCCCHHHHHHHHHHHHHT---CSCC-----SSSSCCHHHHHHHHHHHHHHHTTTCCCGGG-EEEEEEEHHHHH
T ss_pred             eeccCCCCCcCCcHHHHHHHHHHHh---CCCC-----CCcccHHHHHHHHHHHHHHhcCCCCCCCCc-ceEEEECCHHHH
Confidence            44544442 3466777766655532   1222     111223466666667776662 3 333211 255667776 89


Q ss_pred             HHHHHHh-----hcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC---CCCCCCCHHHHHHHhhhcCC
Q 009673          181 NFEVYTA-----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD---ESTGLVDYDMLEKTAILFRP  252 (529)
Q Consensus       181 ~~~~l~a-----ll~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~---~~~~~iD~d~le~~i~~~~p  252 (529)
                      +..++.+     +++|||+|++++|.|.++..        .+...|.  +++.++++   .+++.+|+++|++++++ ++
T Consensus       177 l~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~~~d~~~l~~~l~~-~~  245 (533)
T 3f6t_A          177 IVYAFHSLAENHLLKKGDKIAINEPIFTPYLR--------IPELKDY--ELVEVDLHSYEKNDWEIEPNEIEKLKDP-SI  245 (533)
T ss_dssp             HHHHHHHHHHTTSSCTTCEEEEESSCCHHHHT--------SGGGGGS--EEEEECCCEETTTTSEECHHHHHHHSCT-TE
T ss_pred             HHHHHHHhhhhhccCCcCEEEEcCCCcHHHHH--------HHHHcCC--eEEEEEecCCcccCCCCCHHHHHHHhCC-CC
Confidence            9988888     79999999999998865532        2334555  44444453   24578999999999987 89


Q ss_pred             cEEEEcCCCCCC--CCCHH---HHHHHHH-HhCCEEEEecccccccccccccCCCC----CcccEEEecccccc--cCCC
Q 009673          253 KLIIAGASAYPR--DFDYP---RMRQIAD-AVGALLMMDMAHISGLVAASVVADPF----KYCDVVTTTTHKSL--RGPR  320 (529)
Q Consensus       253 klIi~~~s~~p~--~~d~~---~i~~ia~-~~g~~livD~ah~~Gli~~~~~~~~~----~~aDiv~~S~hK~l--~Gpr  320 (529)
                      ++|++++|+||+  ..+.+   +|.++|+ ++|+++|+|++|. ++....   .++    ...++++.|+||++  +|+|
T Consensus       246 k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~-~~~~~~---~~~~~~~~~~~i~~~S~SK~~g~~G~R  321 (533)
T 3f6t_A          246 KALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYG-AFVPNF---KSIYSVVPYNTMLVYSYSKLFGCTGWR  321 (533)
T ss_dssp             EEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTG-GGSTTC---CCHHHHSGGGEEEEEESHHHHTCGGGC
T ss_pred             eEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCcc-ccccCc---cCHhhcCCCCEEEEecCcccCCCcccc
Confidence            999998888886  55544   7888888 5899999999965 443221   111    13459999999987  6888


Q ss_pred             CeEEEeeCCCcchhHHHhhh--------------------------------cccccCCCCCCChHHHHHHHHHHHHHh-
Q 009673          321 GGMIFFKKDPVLGVELESAI--------------------------------NNAVFPGLQGGPHNHTIGGLAVCLKHA-  367 (529)
Q Consensus       321 gG~i~~~~~~~~~~~l~~~i--------------------------------~~~~~p~~~g~p~~~~iaala~al~~~-  367 (529)
                      .|+++++++.. ...+.+.+                                .........+.+...+.++...++..+ 
T Consensus       322 iG~l~~~~~~~-~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~  400 (533)
T 3f6t_A          322 LGVIALNEKNV-FDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLL  400 (533)
T ss_dssp             EEEEEEESSCH-HHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHT
T ss_pred             eEEEEECcHHH-HHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHh
Confidence            99999988410 00022111                                111111112333333333211122222 


Q ss_pred             -------cCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCC-----C----------CcH-HHHHHh
Q 009673          368 -------QSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM-----G----------IDG-ARVEKI  424 (529)
Q Consensus       368 -------~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~-----~----------i~~-~~~~~~  424 (529)
                             .....++..+.+.++++.+.+.|. .++.+..+ ....+.|+++...     +          .+. +.+.++
T Consensus       401 ~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~~~~~~~~-~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~l  478 (533)
T 3f6t_A          401 TSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-APKDETDT-NTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKL  478 (533)
T ss_dssp             TCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-CCCCCSTT-BCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHH
T ss_pred             hhccccchHHHHHHHHHHHHHHHHHHHHhcC-CCccccCC-CceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHH
Confidence                   123346777788888999999986 66654433 2345567666420     1          233 445677


Q ss_pred             HhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          425 LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       425 L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      |+++||.+.    ||......++++||++..     +++++++++++.|.+++...
T Consensus       479 l~~~GV~v~----pg~~f~~~~~~iRls~a~-----~~~e~i~~~i~~L~~~l~~~  525 (533)
T 3f6t_A          479 AEKNGVVLV----DGVGFGAKPGELRVSQAN-----LPTEDYALIGKQVLELLKEY  525 (533)
T ss_dssp             HHHTTSSSC----TTEEECSSTTEEEEESSS-----SCHHHHHHHHHHHHHHHHHH
T ss_pred             HHhCCEEEe----CCcccCCCCCEEEEEEee-----CCHHHHHHHHHHHHHHHHHH
Confidence            788999984    443211135789999743     45899999999999988754

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.88  E-value=1.1e-21  Score=216.95  Aligned_cols=296  Identities=17%  Similarity=0.134  Sum_probs=204.8

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccce
Q 009673          145 YIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY  223 (529)
Q Consensus       145 ~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~  223 (529)
                      .+.++|    ++++++||++..     +.+++|+ .||.+++.++++|||+|+++.+.|.++..        .+...|+ 
T Consensus       196 ~i~eaE----~~lA~~fGa~~a-----~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~--------~l~lsGa-  257 (715)
T 3n75_A          196 PHKEAE----QYIARVFNADRS-----YMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTH--------LMMMSDV-  257 (715)
T ss_dssp             HHHHHH----HHHHHHHTCSEE-----EEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHSCC-
T ss_pred             HHHHHH----HHHHHHhCCCCc-----eEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHH--------HHHHcCC-
Confidence            345555    788999999863     4458886 99999999999999999999988765532        3445665 


Q ss_pred             EEEEEcccCCCCCC----C-----CHHHHHHHhhhc-C---CcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEecccc
Q 009673          224 FESMPYRLDESTGL----V-----DYDMLEKTAILF-R---PKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHI  289 (529)
Q Consensus       224 ~~~v~~~v~~~~~~----i-----D~d~le~~i~~~-~---pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~  289 (529)
                       +++.++.+.+++.    +     |+++|+++++++ +   |++++++++++.+ ..|+++|.++|+++  .+++|+||+
T Consensus       258 -~pv~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~pn~~G~v~dl~~I~ela~~~--~livDEAH~  334 (715)
T 3n75_A          258 -TPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVK--SIHFDSAWV  334 (715)
T ss_dssp             -EEEEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESSCTTSEEECHHHHHHHCCCS--EEEEECTTC
T ss_pred             -EEEEEeccccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECCCCCCccCCHHHHHHHhCcC--cEEEccccc
Confidence             6666655433333    3     899999999863 2   3478887775544 78999999999866  379999998


Q ss_pred             cccccccccC--CCCC---cccEE---EecccccccCC-CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHH
Q 009673          290 SGLVAASVVA--DPFK---YCDVV---TTTTHKSLRGP-RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGL  360 (529)
Q Consensus       290 ~Gli~~~~~~--~~~~---~aDiv---~~S~hK~l~Gp-rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaal  360 (529)
                      .++.+.+..+  +.+.   .+|++   ++|+||+|+|+ .+|+++++++.     ...+++........++|+...++++
T Consensus       335 ~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i-----~~~~~~~~~~~~~STSpsy~~~Asl  409 (715)
T 3n75_A          335 PYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDV-----NEETFNEAYMMHTTTSPHYGIVAST  409 (715)
T ss_dssp             TTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCC-----CHHHHHHHHHHTSCSSCCHHHHHHH
T ss_pred             cccccCCccccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchh-----hHHHHHHHHHhhcCCCchHHHHHHH
Confidence            8764433222  2332   26765   89999999998 56999998741     2233444333334678899999999


Q ss_pred             HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-----C--cEEecCC----------------------------CCCc
Q 009673          361 AVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-----G--YKLVSGG----------------------------SDNH  405 (529)
Q Consensus       361 a~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-----G--~~v~~~g----------------------------t~~~  405 (529)
                      .+|++.+...+.+++.++..++++++++.|++.     |  +.++.+.                            .|.-
T Consensus       410 daA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~  489 (715)
T 3n75_A          410 ETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPI  489 (715)
T ss_dssp             HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTT
T ss_pred             HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCe
Confidence            989887653245678899999999999999773     2  4554321                            0111


Q ss_pred             eEEEccCC---------CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          406 LVLVDLRP---------MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       406 ~~~v~~~~---------~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      -++++++.         .|+++..+.+.|+++||.+....         ...|=    .+.+.|-++++++++.++|.++
T Consensus       490 Kl~i~~~~~~~~G~~~~~Gi~g~~~~~~L~~~~I~~E~~d---------~~~vl----~l~s~g~~~~~~~~L~~aL~~~  556 (715)
T 3n75_A          490 KVTLLTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTG---------PYNLL----FLFSIGIDKTKALSLLRALTDF  556 (715)
T ss_dssp             EEEEECSCBCTTSCBCSSCCCHHHHHHHHHHTTCCCSEEE---------TTEEE----EECCTTCCHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCCCCCCccccCCCcHHHHHHHHHHCCCEEEecC---------CCcEE----EEeCCCCCHHHHHHHHHHHHHH
Confidence            12334432         26778899999999999986531         12222    2445577889999999998876


Q ss_pred             HHH
Q 009673          477 VEI  479 (529)
Q Consensus       477 ~~~  479 (529)
                      -..
T Consensus       557 ~~~  559 (715)
T 3n75_A          557 KRA  559 (715)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=99.88  E-value=8.6e-22  Score=205.04  Aligned_cols=328  Identities=16%  Similarity=0.162  Sum_probs=198.1

Q ss_pred             cceeEecCC--CC-----CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC--CCCCceeee
Q 009673          103 KSLELIASE--NF-----TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQ  173 (529)
Q Consensus       103 ~~i~L~ase--n~-----~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~--~~~~~~~V~  173 (529)
                      +.|+|..+.  ++     +.+.+.+++...+.+....+|+.   ..|   ..++.+.+.+++.+.+|.+  ++++  .+.
T Consensus        29 ~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---~~g---~~~lr~~ia~~~~~~~~~~~~~~~i--~~v  100 (401)
T 7aat_A           29 KKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLP---IAG---LADFTRASAELALGENSEAFKSGRY--VTV  100 (401)
T ss_dssp             TCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCC---TTC---CHHHHHHHHHHHHCTTCHHHHTTCE--EEE
T ss_pred             CceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCC---CCC---CHHHHHHHHHHhcCCCccccccCce--EEE
Confidence            358887655  21     23578888876654322334432   112   2355544445555544532  4321  112


Q ss_pred             cCChH-HHHHHHHHhh---cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC-CCCCCCCHHHHHHHhh
Q 009673          174 PLSGS-PANFEVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAI  248 (529)
Q Consensus       174 ~~sGs-~A~~~~l~al---l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~-~~~~~iD~d~le~~i~  248 (529)
                      .|+|+ +|+..++.++   ++|||+|++++|.|.++..        .+...|.  +++.++++ ++++.+|++++++.++
T Consensus       101 ~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~  170 (401)
T 7aat_A          101 QGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTP--------IFRDAGL--QLQAYRYYDPKTCSLDFTGAMEDIS  170 (401)
T ss_dssp             EEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECEETTTTEECHHHHHHHHT
T ss_pred             ecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHH--------HHHHcCC--eeEeeeeeccccCccCHHHHHHHHH
Confidence            15555 9999877665   4999999999998876532        2344565  56666653 2368899998877775


Q ss_pred             h--cCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccccc--CCCC------CcccEEEeccc
Q 009673          249 L--FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPF------KYCDVVTTTTH  313 (529)
Q Consensus       249 ~--~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~------~~aDiv~~S~h  313 (529)
                      .  .+++++++++++||+  ..   ++++|.++|++||+++++|++|. ++...+..  ..++      ....+++.|+|
T Consensus       171 ~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s  249 (401)
T 7aat_A          171 KIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQ-GFASGDINRDAWALRHFIEQGIDVVLSQSYA  249 (401)
T ss_dssp             TSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCT-TTTTSCHHHHTHHHHHHHHTTCCCEEEEECT
T ss_pred             hCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccc-cccCCCccccHHHHHHHHhcCCcEEEEecCC
Confidence            4  257888999999997  33   57889999999999999999954 33332210  0000      12348899999


Q ss_pred             ccc--cCCCCeEEEeeCCCcchhH----HHhhhcccccCCCCCCChHHHHHHHHHHHHH--hc---CchHHHHHHHHHHH
Q 009673          314 KSL--RGPRGGMIFFKKDPVLGVE----LESAINNAVFPGLQGGPHNHTIGGLAVCLKH--AQ---SPEFKVYQNKVVSN  382 (529)
Q Consensus       314 K~l--~GprgG~i~~~~~~~~~~~----l~~~i~~~~~p~~~g~p~~~~iaala~al~~--~~---~~~~~~~~~~i~~~  382 (529)
                      |++  +|+|.|++++.....   +    +...+.....+...+.+.. ..++.+.++..  +.   ....++..+++.++
T Consensus       250 K~~~~~G~RiG~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  325 (401)
T 7aat_A          250 KNMGLYGERAGAFTVICRDA---EEAKRVESQLKILIRPMYSNPPMN-GARIASLILNTPELRKEWLVEVKGMADRIISM  325 (401)
T ss_dssp             TTSCCGGGCEEEEEEECSSH---HHHHHHHHHHHHHHHHHHSSCCHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccCceEEEEEEeCCH---HHHHHHHHHHHHHHHhccCCCChH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence            997  788889988733100   2    3333332221112222222 22222222321  00   12346677888899


Q ss_pred             HHHHHHHHHhcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCcc
Q 009673          383 CRALASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTT  458 (529)
Q Consensus       383 a~~l~~~L~~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt  458 (529)
                      ++.+.+.|.+.|    +.+..+. .+++.|+++     +.+.+..+|+++||.+.             .++||++..++ 
T Consensus       326 r~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~ll~~~gi~v~-------------~~~Ris~~~~~-  385 (401)
T 7aat_A          326 RTQLVSNLKKEGSSHNWQHITDQ-IGMFCFTGL-----KPEQVERLTKEFSIYMT-------------KDGRISVAGVA-  385 (401)
T ss_dssp             HHHHHHHHHHTTCCSCCHHHHHC-CSSEEECCC-----CHHHHHHHHHHHCEECC-------------TTCEEEGGGCC-
T ss_pred             HHHHHHHHHhcCCCCCCceecCC-cceEEecCC-----CHHHHHHHHHhCCEecc-------------CCCeEEeccCC-
Confidence            999999998875    4433321 234445443     46777777899999983             23698875443 


Q ss_pred             CCCCHHHHHHHHHHHHHHH
Q 009673          459 RGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       459 ~g~~~~d~~~la~~i~~~~  477 (529)
                          +++++++++.|++++
T Consensus       386 ----~~~i~~~~~~l~~~~  400 (401)
T 7aat_A          386 ----SSNVGYLAHAIHQVT  400 (401)
T ss_dssp             ----TTTHHHHHHHHHHHH
T ss_pred             ----hhhHHHHHHHHHHHh
Confidence                577999999998765

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.88  E-value=8.6e-22  Score=207.64  Aligned_cols=286  Identities=17%  Similarity=0.158  Sum_probs=187.8

Q ss_pred             cCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhcc-CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC
Q 009673           85 EADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL  163 (529)
Q Consensus        85 ~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~-y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~  163 (529)
                      +...++.+.++++..++...++.++.+|  .+.|++++....... ...+..+  |..+....+++    ++++++++|.
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n--~~~vl~A~~~~~~~~~~~~~~~g--~~y~~~~~~~l----~~~la~~~g~   80 (431)
T 3ht4_A            9 EKIAPIVKEVESQITEVHKRADEVIESN--QFRVLESFGKHKISDSHFIPTTG--YGYDDIGRDTL----EKVYADVFGA   80 (431)
T ss_dssp             TTSHHHHHHHHHHTHHHHHHHHHHHHHH--HHHHHHHHHHTTCCGGGSCCCCT--TCCSCHHHHHH----HHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhchhhhhcCCCCC--CCCChhhHHHH----HHHHHHHhCC
Confidence            3445555555566666667777777666  468888887643211 1111111  11122333344    4789999999


Q ss_pred             CCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcC-CCCCccccccccc--cccccccccceEEEEEcccCCCCCCCCH
Q 009673          164 DENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLD-LPHGGHLSHGFMT--PKRRVSGTSIYFESMPYRLDESTGLVDY  240 (529)
Q Consensus       164 ~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~-~~~~g~~s~g~~~--~~~~i~~~g~~~~~v~~~v~~~~~~iD~  240 (529)
                      +.+.  ++++++||++|+..++.++++|||+|++++ +.|+++.......  +.......|.  +++.+++++ ++.+|+
T Consensus        81 ~~~~--~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~--~~~~v~~~~-~~~~d~  155 (431)
T 3ht4_A           81 EAGL--VRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNI--GYNAVPLTE-GGLVDF  155 (431)
T ss_dssp             SEEC--CBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTC--EEEECCBCT-TSSBCH
T ss_pred             Cccc--ccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCC--EEEEeCCCC-CCCcCH
Confidence            8642  245568999999999999999999999998 7776543210000  0011222344  777777763 588999


Q ss_pred             HHHHHHhhhcCCcEEEEc-CCCCCC-----CCCHHHHHHHHHH--hCCEEEEecccccccccccccCCCCC-cccEEEec
Q 009673          241 DMLEKTAILFRPKLIIAG-ASAYPR-----DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-YCDVVTTT  311 (529)
Q Consensus       241 d~le~~i~~~~pklIi~~-~s~~p~-----~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S  311 (529)
                      ++|++++++ ++++|+++ +++||+     ..|+++|+++|++  +|+++++|++|..+...    ..++. ++|++++|
T Consensus       156 e~l~~~l~~-~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~----~~~~~~g~Di~~~S  230 (431)
T 3ht4_A          156 EAVAAAIHS-NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEE----QEPCHVGADLMAGS  230 (431)
T ss_dssp             HHHHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSS----CCGGGTTCSEEEEE
T ss_pred             HHHHhhcCC-CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccC----CCccccCCeEEEcC
Confidence            999999987 89999988 466665     4478999999999  99999999997655421    12232 68999999


Q ss_pred             ccccccC---CCCeEEEeeCCCcchhHHHhhhcccc-cCCC--CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Q 009673          312 THKSLRG---PRGGMIFFKKDPVLGVELESAINNAV-FPGL--QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA  385 (529)
Q Consensus       312 ~hK~l~G---prgG~i~~~~~~~~~~~l~~~i~~~~-~p~~--~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~  385 (529)
                      +||++.|   +.||++++++      ++.+++.... .++.  ..++.......+..+++.     ...+.++..+++++
T Consensus       231 ~sK~lgg~~~~~GG~v~~~~------~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~a~~  299 (431)
T 3ht4_A          231 LIKNPGGGIVKTGGYIVGKE------QYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFL-----APHVAGQALKGAIF  299 (431)
T ss_dssp             TTSGGGTTTCSSCEEEEECH------HHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHHH-----HHHHHHHHHHHHHH
T ss_pred             ccccCCCCCCCceEEEEecH------HHHHHHHHHhccCCcccccCccHHHHHHHHhHhhh-----HHHHHHHHHHHHHH
Confidence            9999866   7889999987      6776664422 1221  112211111111123332     24667888999999


Q ss_pred             HHHHHHhcCcEEec
Q 009673          386 LASRLVELGYKLVS  399 (529)
Q Consensus       386 l~~~L~~~G~~v~~  399 (529)
                      +++.|++.|+++.+
T Consensus       300 l~~~L~~~g~~v~p  313 (431)
T 3ht4_A          300 TAAFLEKLGMNTSP  313 (431)
T ss_dssp             HHHHHHHHTCCEES
T ss_pred             HHHHHHhCcCEecC
Confidence            99999999988754

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=99.88  E-value=1.5e-21  Score=208.97  Aligned_cols=331  Identities=12%  Similarity=0.014  Sum_probs=210.1

Q ss_pred             cHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCC------ceeeecCChHHHHHHHHHhh
Q 009673          115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKW------GVNVQPLSGSPANFEVYTAI  188 (529)
Q Consensus       115 ~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~------~~~V~~~sGs~A~~~~l~al  188 (529)
                      +..+.+++...++ .+..+      |...+...++|+.+++++++++|++.+..      ...+.+++||+||+.++.++
T Consensus        87 ~~~~~~~~~~~~n-~~~~~------~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~  159 (486)
T 1js3_A           87 PAMLADMLCGAIG-CIGFS------WAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAA  159 (486)
T ss_dssp             HHHHHHHHHHHHC-CCCSS------GGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC-cCccc------cccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHH
Confidence            4456777776653 22211      33345578899999999999999985311      11345567779999888776


Q ss_pred             cCC---------CC--------E--EEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh
Q 009673          189 LKP---------HD--------R--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL  249 (529)
Q Consensus       189 l~p---------GD--------~--Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~  249 (529)
                      .++         ||        +  |+++++.|.+..        +.+...|.  +++.++++ +++.+|+++|++++++
T Consensus       160 ~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~--------~~~~~~G~--~v~~v~~d-~~~~~d~~~L~~~i~~  228 (486)
T 1js3_A          160 RTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVE--------RAGLIGGV--KLKAIPSD-GKFAMRASALQEALER  228 (486)
T ss_dssp             HHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHH--------HHHHHHTC--EEEEECCC-TTSCCCHHHHHHHHHH
T ss_pred             HHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHH--------HHHHhCCC--ceEEeecC-CCCCCCHHHHHHHHHH
Confidence            421         43        3  677777664321        23445565  56677776 5789999999999976


Q ss_pred             cCC------cEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC---CCCCcccEEEecccccccC
Q 009673          250 FRP------KLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRG  318 (529)
Q Consensus       250 ~~p------klIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~---~~~~~aDiv~~S~hK~l~G  318 (529)
                       ++      .+|+++.++|++  ..|+++|.++|++||+|+++|+||..+....+...   ..+.++|++++++||++.+
T Consensus       229 -~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~  307 (486)
T 1js3_A          229 -DKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLV  307 (486)
T ss_dssp             -HHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSC
T ss_pred             -HHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCC
Confidence             33      377777665554  78999999999999999999999876654322111   1123689999999999876


Q ss_pred             CCC-eEEEeeCCCcchhHH-Hhhhccc---ccC--------------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHH
Q 009673          319 PRG-GMIFFKKDPVLGVEL-ESAINNA---VFP--------------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV  379 (529)
Q Consensus       319 prg-G~i~~~~~~~~~~~l-~~~i~~~---~~p--------------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i  379 (529)
                      |.+ |+++++++     .+ .+.+...   ...              ..+++... ...++..+++.+...++.++.++.
T Consensus       308 p~~~G~l~~~~~-----~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~-~~~~~~~al~~~g~~g~~~~~~~~  381 (486)
T 1js3_A          308 NFDCSAMWVKRR-----TDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRF-RSLKMWFVFRMYGVKGLQAYIRKH  381 (486)
T ss_dssp             CSSCEEEEESCH-----HHHHGGGC------------CCSCCCGGGSSSCSCCCC-THHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcceEEEEEeCH-----HHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCch-hHHHHHHHHHHHhHHHHHHHHHHH
Confidence            655 99999873     32 3333110   000              00111111 123444555544445678889999


Q ss_pred             HHHHHHHHHHHHhc-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCcc
Q 009673          380 VSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTT  458 (529)
Q Consensus       380 ~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt  458 (529)
                      .++++++.+.|.+. |++++.+. ..+++.+.+.+......++.+.|.+.|+.+..   |+.  ....+.+|+++...  
T Consensus       382 ~~~a~~l~~~L~~~~~~~~~~~~-~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~---~~~--~~~~~~lRi~~~~~--  453 (486)
T 1js3_A          382 VQLSHEFEAFVLQDPRFEVCAEV-TLGLVCFRLKGSDGLNEALLERINSARKIHLV---PCR--LRGQFVLRFAICSR--  453 (486)
T ss_dssp             HHHHHHHHHHHHHCTTEEECSCC-CSSEEEEEESSCHHHHHHHHHHHHHHTSCBCE---EEE--ETTEEEEEEECCCT--
T ss_pred             HHHHHHHHHHHhcCCCeEEeCCC-ceeEEEEEecChHHHHHHHHHHHHhcCCEEEE---EEE--ECCEEEEEEEeCCC--
Confidence            99999999999984 89987532 23344444432110135677777777764311   111  01246899996322  


Q ss_pred             CCCCHHHHHHHHHHHHHHHHH
Q 009673          459 RGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       459 ~g~~~~d~~~la~~i~~~~~~  479 (529)
                       ..+++|++++++.|++++..
T Consensus       454 -~~t~~di~~~~~~l~~~~~~  473 (486)
T 1js3_A          454 -KVESGHVRLAWEHIRGLAAE  473 (486)
T ss_dssp             -TCCHHHHHHHHHHHHHHHHH
T ss_pred             -CCCHHHHHHHHHHHHHHHHH
Confidence             13589999999999888754

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=99.88  E-value=2.5e-21  Score=208.96  Aligned_cols=308  Identities=13%  Similarity=0.045  Sum_probs=195.1

Q ss_pred             hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc-------C-CCC------EEEEcCCCCCcccccc
Q 009673          144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-------K-PHD------RIMGLDLPHGGHLSHG  209 (529)
Q Consensus       144 ~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all-------~-pGD------~Vl~~~~~~~g~~s~g  209 (529)
                      +...++|..+++++++++|++.+.   .+..++||+||..++.++.       + +||      +|++.+..|.+..   
T Consensus       144 ~~~~~le~~~~~~la~l~g~~~~~---~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~---  217 (515)
T 2jis_A          144 PVFVLMEEEVLRKLRALVGWSSGD---GIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQ---  217 (515)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCSSCE---EEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHH---
T ss_pred             hHHHHHHHHHHHHHHHHhCCCCCC---eEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHH---
Confidence            456788888999999999998432   2444566799998888763       2 686      7888877665432   


Q ss_pred             ccccccccccccceE-EEEEcccCCCCCCCCHHHHHHHhhhc-----CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCE
Q 009673          210 FMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASAYPR--DFDYPRMRQIADAVGAL  281 (529)
Q Consensus       210 ~~~~~~~i~~~g~~~-~~v~~~v~~~~~~iD~d~le~~i~~~-----~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~  281 (529)
                           +.+...|.+. +++.++++ +++.+|+++|++++++.     +|++|+++.++|++  ..|+++|+++|+++|+|
T Consensus       218 -----~~~~~~g~g~~~v~~v~~~-~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~  291 (515)
T 2jis_A          218 -----KGAAFLGLGTDSVRVVKAD-ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLW  291 (515)
T ss_dssp             -----HHHHHTTSCGGGEEEECBC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCE
T ss_pred             -----HHHHHcCCCCCcEEEEecC-CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCe
Confidence                 1223334322 45556665 46899999999999763     48888888665554  78999999999999999


Q ss_pred             EEEecccccccccccccCCCC---CcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhc----ccccC-------
Q 009673          282 LMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN----NAVFP-------  346 (529)
Q Consensus       282 livD~ah~~Gli~~~~~~~~~---~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~----~~~~p-------  346 (529)
                      +++|++|+.+....+.....+   .++|++++|+|||+.+|.+ |+++++++.    ++.++..    ...+.       
T Consensus       292 l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~----~~~~~~~~~~~~yl~~~~~~~~~  367 (515)
T 2jis_A          292 LHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTS----NLLKRCHGSQASYLFQQDKFYDV  367 (515)
T ss_dssp             EEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCS----CHHHHHHCC---------CCSCG
T ss_pred             EEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChH----HHHHHHhcCCchhccCCcccccc
Confidence            999999877765433221112   3689999999999988876 999998730    1322210    00000       


Q ss_pred             -------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceEEEccCCC---C
Q 009673          347 -------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRPM---G  415 (529)
Q Consensus       347 -------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~~v~~~~~---~  415 (529)
                             .++.+..... .+++.+++.+...+++++.++..++++++.+.|++ .|++++.+...+. +.+...+.   +
T Consensus       368 ~~~~~~~~~~~~rr~~a-l~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~-v~f~~~p~~~~~  445 (515)
T 2jis_A          368 ALDTGDKVVQCGRRVDC-LKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVN-VCFWFVPPSLRG  445 (515)
T ss_dssp             GGCCGGGCSCSSCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSE-EEEEECCGGGTT
T ss_pred             cCCCCCCCCCCCCcccH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeE-EEEEEeCccccc
Confidence                   0011110001 12222333333456788889999999999999998 4899886432222 22222111   1


Q ss_pred             C----c-HH-------HHHHhHhcCCeEE-cCCCCCCCCCCCCCCeEEEcc-CCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          416 I----D-GA-------RVEKILDMASITL-NKNSVPGDKSALVPGGIRIGS-PAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       416 i----~-~~-------~~~~~L~~~GI~v-~~~~~Pg~~~~~~~~~iRig~-~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .    + ..       .+.+.|.+.|+.+ .....++     ..+.+|+++ +..+    +++|++++++.|++++.
T Consensus       446 ~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~-----~~~~lRis~~~~~~----t~edid~~~~~l~~~~~  513 (515)
T 2jis_A          446 KQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGT-----RGNFFRVVVANSAL----TCADMDFLLNELERLGQ  513 (515)
T ss_dssp             CTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETT-----EEEEEEEECCCTTC----CHHHHHHHHHHHHHHHT
T ss_pred             cccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECC-----ceEEEEEEeCCCCC----CHHHHHHHHHHHHHHHh
Confidence            0    1 01       2455666678654 2110111     235799998 5554    48999999999987653

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=99.88  E-value=2.4e-21  Score=201.93  Aligned_cols=329  Identities=14%  Similarity=0.137  Sum_probs=198.3

Q ss_pred             cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH--cC-CCCCCCceeeecCCh
Q 009673          103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA--FN-LDENKWGVNVQPLSG  177 (529)
Q Consensus       103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~--~g-~~~~~~~~~V~~~sG  177 (529)
                      +.|+|..+++  ++++.|++++...+......  .+...|+......+++    +.++++  +| ++++    +|.+++|
T Consensus        34 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~y~~~~g~~~lr----~~la~~l~~g~~~~~----~v~~~~G  103 (400)
T 3asa_A           34 TVINLSIGDTTQPLNASVAEAFASSIARLSSP--TTCRGYGPDFGLPALR----QKLSEDFYRGFVDAK----EIFISDG  103 (400)
T ss_dssp             CCEECSSCCCCCCCCHHHHHHHHHHHHHHTSS--SCCCCCCCTTCCHHHH----HHHHHTTSTTSSCGG----GEEEESC
T ss_pred             ceEeccCCCCCCCCCHHHHHHHHHHHhccccc--ccccCCCCCCCCHHHH----HHHHHHHHcCCCCHH----HEEEccC
Confidence            5688877765  36889999998776432100  0000121111223444    455666  57 5543    4555777


Q ss_pred             H-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEE
Q 009673          178 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLI  255 (529)
Q Consensus       178 s-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklI  255 (529)
                      + +++..+ ..+++|||+|++.+|.|.++..        .+...|.. .++.++++++ ....|+++    +  .++++|
T Consensus       104 ~~~al~~~-~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~-~~~~~~~~~~~~~~~~l~~----~--~~~~~v  167 (400)
T 3asa_A          104 AKVDLFRL-LSFFGPNQTVAIQDPSYPAYLD--------IARLTGAK-EIIALPCLQENAFFPEFPE----D--THIDIL  167 (400)
T ss_dssp             HHHHHHHH-HHHHCSSCEEEEEESCCHHHHH--------HHHHTTCS-EEEEEECCGGGTTCCCCCT----T--CCCSEE
T ss_pred             hHHHHHHH-HHHcCCCCEEEECCCCcHHHHH--------HHHHcCCc-ceEecccchhcCcccChhh----c--cCccEE
Confidence            6 777764 4567899999999988765421        22334542 1455555432 23444322    1  378999


Q ss_pred             EEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---C---cccEEEecccccc--cCCCCe
Q 009673          256 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K---YCDVVTTTTHKSL--RGPRGG  322 (529)
Q Consensus       256 i~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~---~aDiv~~S~hK~l--~GprgG  322 (529)
                      +++.++||+  ..+   +++|.++|+++|+++|+|++|. ++...+..+.++   +   ..+++++|+||++  +|+|.|
T Consensus       168 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG  246 (400)
T 3asa_A          168 CLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYS-TFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLG  246 (400)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTG-GGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCE
T ss_pred             EEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhh-hhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchhee
Confidence            998888886  444   6678899999999999999965 333222111111   1   1248899999997  678889


Q ss_pred             EEEeeCCCcchhHH-------HhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCc
Q 009673          323 MIFFKKDPVLGVEL-------ESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY  395 (529)
Q Consensus       323 ~i~~~~~~~~~~~l-------~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~  395 (529)
                      +++++++      +       .+.+.........++++....+++..+++..   +.++..+++.++++.+.+.|++.|+
T Consensus       247 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~l~~~L~~~g~  317 (400)
T 3asa_A          247 WTVIPQE------LTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL---PQLEAIHYYRENSDLLRKALLATGF  317 (400)
T ss_dssp             EEECCTT------CBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT---TTCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEeeChh------hccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            9999874      3       2222111000011223344444444566643   3456778888999999999998898


Q ss_pred             EEecCCCCCceEEEc-cCCCCCcHHHHHH-hHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673          396 KLVSGGSDNHLVLVD-LRPMGIDGARVEK-ILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI  473 (529)
Q Consensus       396 ~v~~~gt~~~~~~v~-~~~~~i~~~~~~~-~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i  473 (529)
                      ++..+ ..++++|++ +. .+++..++.+ +++++||.+..+...+   +..++++||++  .    .+++++++.++.|
T Consensus       318 ~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gv~v~~g~~f~---~~~~~~iRis~--~----~~~e~i~~~l~~l  386 (400)
T 3asa_A          318 EVFGG-EHAPYLWVKPTQ-ANISDRDLFDFFLREYHIAITPGIGFG---RSGSGFVRFSS--L----GKREDILAACERL  386 (400)
T ss_dssp             EEEEC-SSSSEEEEECCC-TTCCTTTHHHHHHHHHSEECEEGGGGC---GGGTTCEEEEC--C----SCHHHHHHHHHHH
T ss_pred             eeeCC-CCceEEEEeccC-CCCCHHHHHHHHHHhCCEEEeChhHhC---CCCCCEEEEEe--e----CCHHHHHHHHHHH
Confidence            87754 234567777 53 3445544544 4567799986532111   11356899983  2    3589999999999


Q ss_pred             HHHHH
Q 009673          474 HEGVE  478 (529)
Q Consensus       474 ~~~~~  478 (529)
                      ++++.
T Consensus       387 ~~~~~  391 (400)
T 3asa_A          387 QMAPA  391 (400)
T ss_dssp             HC---
T ss_pred             HHHHH
Confidence            88775

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.88  E-value=1.1e-21  Score=204.47  Aligned_cols=324  Identities=12%  Similarity=0.040  Sum_probs=208.5

Q ss_pred             cceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeee--cCChHHH
Q 009673          103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQ--PLSGSPA  180 (529)
Q Consensus       103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~--~~sGs~A  180 (529)
                      ..+++.+++..+|+.|++++..... .. .++  ..+  +..+ .++.+.+++++++++|++..+   +|.  .++|++|
T Consensus        40 ~~~~~~~~~~~~~~~v~~a~~~~~~-~~-~~~--~~~--~~~~-~~~~~~~~~~la~~~g~~~~~---~i~~~t~g~t~a  109 (398)
T 2fyf_A           40 RDGRFGSGPSKVRLEQLQTLTTTAA-AL-FGT--SHR--QAPV-KNLVGRVRSGLAELFSLPDGY---EVILGNGGATAF  109 (398)
T ss_dssp             SSCBCCSSSCCCCHHHHHGGGTTTT-TT-TTS--CTT--SHHH-HHHHHHHHHHHHHHTTCCTTC---EEEEEETCHHHH
T ss_pred             CCccccCCCCCCCHHHHHHHhhcCC-Cc-cCc--CcC--CHHH-HHHHHHHHHHHHHHhCCCCCc---eEEEeCCchhHH
Confidence            4577888888899999999976310 10 010  011  1222 233345679999999997421   333  4556699


Q ss_pred             HHHHHHhhcCCC-CEEEEcCCCCCccccccccccccccccc--cceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 009673          181 NFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGT--SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA  257 (529)
Q Consensus       181 ~~~~l~all~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~--g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~  257 (529)
                      +..++.++++|| |.|  ....|+.    ...   ......  |.  +++.++++ ++..+|.     .+++ +|++|++
T Consensus       110 l~~~~~~l~~~gv~~v--~~~~~~~----~~~---~~~~~~~~g~--~~~~v~~~-~g~~~~~-----~i~~-~~~~v~~  171 (398)
T 2fyf_A          110 WDAAAFGLIDKRSLHL--TYGEFSA----KFA---SAVSKNPFVG--EPIIITSD-PGSAPEP-----QTDP-SVDVIAW  171 (398)
T ss_dssp             HHHHHHHTCSSCEEEE--ECSHHHH----HHH---HHHHHCTTSC--CCEEEECC-TTCCCCC-----CCCT-TCSEEEE
T ss_pred             HHHHHHHhcCCCeEEE--eCCHHHH----HHH---HHHHHhCCCC--ceEEEecC-CCCCCCc-----cccC-CCCEEEE
Confidence            999999999998 444  2222210    000   001112  33  33444454 3333332     1444 7999998


Q ss_pred             cCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchh
Q 009673          258 GASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGV  334 (529)
Q Consensus       258 ~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~  334 (529)
                      ++++||+  ..|+++|.++   +|++|++|++|..|....     .+..+|++++|+||+++++.| |++++++      
T Consensus       172 ~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~-----~~~~~di~~~s~sK~~~~~gg~g~l~~~~------  237 (398)
T 2fyf_A          172 AHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPV-----DIAETDAYYFAPQKNFASDGGLWLAIMSP------  237 (398)
T ss_dssp             ESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCC-----CGGGCSEEEECTTSTTCSCSSEEEEEECH------
T ss_pred             eCcCCCcceecchHHhhhh---cCCeEEEEeccccCCccc-----CcccCcEEEEecCcccCCCCceEEEEECH------
Confidence            8777776  6788887777   899999999987664321     222479999999999866633 8888887      


Q ss_pred             HHHhhhccc----------c----------cCCCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHhc
Q 009673          335 ELESAINNA----------V----------FPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVEL  393 (529)
Q Consensus       335 ~l~~~i~~~----------~----------~p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~~  393 (529)
                      ++.++++..          .          .....++++...++++..+++.+...+ +++..+++.++++++.+.|++.
T Consensus       238 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~  317 (398)
T 2fyf_A          238 AALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQER  317 (398)
T ss_dssp             HHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHc
Confidence            555544210          0          012235677777777777887654444 6788899999999999999986


Q ss_pred             -CcEEec--C-CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHH
Q 009673          394 -GYKLVS--G-GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI  469 (529)
Q Consensus       394 -G~~v~~--~-gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~l  469 (529)
                       |+++..  + +..++++++.+. .+++..++.+.|.+.||.+..+    .. ....+.|||++...+    +++|++++
T Consensus       318 ~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~gI~v~~g----~~-~~~~~~iRis~~~~~----t~e~i~~~  387 (398)
T 2fyf_A          318 PYTTPFVTDPGLRSQVVGTIDFV-DDVDAGTVAKILRANGIVDTEP----YR-KLGRNQLRVAMFPAV----EPDDVSAL  387 (398)
T ss_dssp             TTEEESCCSGGGBCSSEEEEEEC-TTSCHHHHHHHHHHTTCBCCSC----CT-TTCSSEEEEECCTTS----CHHHHHHH
T ss_pred             CCceeccCChhhcCCcEEEEECC-CCCCHHHHHHHHHHCCcEEecC----cc-cCCCCEEEEEecCCC----CHHHHHHH
Confidence             888874  2 112336677664 3567788888888889998542    11 123578999986543    58999999


Q ss_pred             HHHHHHHHH
Q 009673          470 ADFIHEGVE  478 (529)
Q Consensus       470 a~~i~~~~~  478 (529)
                      ++.|++++.
T Consensus       388 ~~~l~~~l~  396 (398)
T 2fyf_A          388 TECVDWVVE  396 (398)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999988764

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.87  E-value=8.8e-21  Score=196.78  Aligned_cols=312  Identities=12%  Similarity=0.063  Sum_probs=199.9

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCC--
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP--  191 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~p--  191 (529)
                      .+|.|.+++...+.. +..++   +.+ ..+...+++    +++++++|.+.     .+..++|++|+..++.++..+  
T Consensus        53 ~~p~v~~a~~~~~~~-~~~~~---~~~-~~~~~~~l~----~~la~~~g~~~-----v~~~~~gt~a~~~al~~~~~~~~  118 (392)
T 3ruy_A           53 RHPKIINALIDQANR-VTLTS---RAF-HSDQLGPWY----EKVAKLTNKEM-----VLPMNTGAEAVETAIKTARRWAY  118 (392)
T ss_dssp             TCHHHHHHHHHHHTT-CSCCC---TTS-EETTHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHh-ccccc---ccc-CCHHHHHHH----HHHHHhcCCCE-----EEEeCcHHHHHHHHHHHHHHhhh
Confidence            579999999877643 22211   111 233444444    77888888432     345577889999998877644  


Q ss_pred             --------CCEEEEcCCCCCcccccccccccccccccc---ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 009673          192 --------HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS---IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS  260 (529)
Q Consensus       192 --------GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g---~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s  260 (529)
                              ||+|++.++.|.+................+   ....+..++      ..|+++|++++++ ++++|+++++
T Consensus       119 ~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~-~~~~v~~~~~  191 (392)
T 3ruy_A          119 DVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIP------YGDLEALKAAITP-NTAAFILEPI  191 (392)
T ss_dssp             HTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEEC------TTCHHHHHHHCCT-TEEEEEECSS
T ss_pred             hccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeC------cccHHHHHHHhcc-CeEEEEEeCc
Confidence                    789999998875442111000000000000   000122222      2389999999986 8999999888


Q ss_pred             CCCC--CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-CCC-CC-cccEEEecccccccC--CCCeEEEeeCC
Q 009673          261 AYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADP-FK-YCDVVTTTTHKSLRG--PRGGMIFFKKD  329 (529)
Q Consensus       261 ~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~~-~~-~aDiv~~S~hK~l~G--prgG~i~~~~~  329 (529)
                      +||+  ..+    +++|.++|++||++||+|++|. |+...+.. ... .. ..|++++  +|+++|  .|+|++++++ 
T Consensus       192 ~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~~~--SK~l~gG~~~~G~~~~~~-  267 (392)
T 3ruy_A          192 QGEAGINIPPAGFLKEALEVCKKENVLFVADEIQT-GLGRTGKVFACDWDNVTPDMYIL--GKALGGGVFPISCAAANR-  267 (392)
T ss_dssp             BSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEE--CGGGGTTTSCCEEEEECH-
T ss_pred             cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechh-CCCccccchhhhccCCCCCEEEE--chhhhCChhhhEEEEECH-
Confidence            8875  566    9999999999999999999974 43322211 100 11 3577755  599977  7999999987 


Q ss_pred             CcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCc---EEecCCCCCce
Q 009673          330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY---KLVSGGSDNHL  406 (529)
Q Consensus       330 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~---~v~~~gt~~~~  406 (529)
                           ++.+.+......+.++ ++...++++..+++....   ++..+++.++++++.+.|++.+.   ....+  ...+
T Consensus       268 -----~~~~~~~~~~~~~~~~-~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~g~~  336 (392)
T 3ruy_A          268 -----DILGVFEPGSHGSTFG-GNPLACAVSIAALEVLEE---EKLTERSLQLGEKLVGQLKEIDNPMITEVRG--KGLF  336 (392)
T ss_dssp             -----HHHTTCCTTSSCCSST-TCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTCCCTTEEEEEE--ETTE
T ss_pred             -----HHHhhhccCCcCCCCC-CCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHhcCCCceEEEe--eeeE
Confidence                 6777776543333333 344455555556765432   45677888889999999987642   22222  2345


Q ss_pred             EEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          407 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       407 ~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      +++.+..   +..++.+.|.++||.+.    |+     .++.+||+.+..    .+++|++++++.|++++
T Consensus       337 ~~~~~~~---~~~~l~~~l~~~gi~v~----~~-----~~~~iRi~~~~~----~~~~~i~~~~~~l~~~l  391 (392)
T 3ruy_A          337 IGIELNE---PARPYCEQLKAAGLLCK----ET-----HENVIRIAPPLV----ISEEDLEWAFQKIKAVL  391 (392)
T ss_dssp             EEEEESS---CSHHHHHHHHTTTEECC----CB-----TTTEEEECCCTT----CCHHHHHHHHHHHHHHH
T ss_pred             EEEEEcc---hHHHHHHHHHHCCcEEe----cC-----CCCEEEEECCCC----CCHHHHHHHHHHHHHHh
Confidence            5565643   56778888889999984    33     257899997654    45899999999998875

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=99.87  E-value=1.3e-21  Score=204.64  Aligned_cols=327  Identities=15%  Similarity=0.176  Sum_probs=201.7

Q ss_pred             cceeEecCC----C---CCcHHHHHHHhh-hhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceee
Q 009673          103 KSLELIASE----N---FTSRAVMEAVGS-CLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNV  172 (529)
Q Consensus       103 ~~i~L~ase----n---~~~~~V~eal~~-~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V  172 (529)
                      +.|+|..+.    +   ++++.|.+++.. .+......+|..      .....++++.+.+++...+|.  +++++ +.+
T Consensus        30 ~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~------~~g~~~lr~~ia~~~~~~~~~~~~~~~i-~~~  102 (412)
T 1yaa_A           30 TKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLG------ITGLPSLTSNAAKIIFGTQSDALQEDRV-ISV  102 (412)
T ss_dssp             SCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCC------TTCCHHHHHHHHHHHHCTTCHHHHTTCE-EEE
T ss_pred             CeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCC------CCCcHHHHHHHHHHHhcCCCCCCCcceE-EEE
Confidence            467887654    2   467999999988 664222223321      112345554444555443442  34321 111


Q ss_pred             ecCChHHHHHHH--HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc-CCCCCCCCHHHHHHHhhh
Q 009673          173 QPLSGSPANFEV--YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAIL  249 (529)
Q Consensus       173 ~~~sGs~A~~~~--l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v-~~~~~~iD~d~le~~i~~  249 (529)
                      ++.+|++|+..+  +..+++|||+|++++|.|.++..        .+...|.  +++.+++ +++++.+|+++|++.+++
T Consensus       103 ~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~  172 (412)
T 1yaa_A          103 QSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMA--------IFENQGL--KTATYPYWANETKSLDLNGFLNAIQK  172 (412)
T ss_dssp             EEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHH--------HHHTTTC--CEEEEECEETTTTEECHHHHHHHHHH
T ss_pred             eccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHH--------HHHHcCc--eEEEEeeecCCCCccCHHHHHHHHHh
Confidence            134455888877  34556899999999998765431        2334454  5555665 444678999999999976


Q ss_pred             cC-Cc-EEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccc---cc-CC-CCC--c----ccEEEec
Q 009673          250 FR-PK-LIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAAS---VV-AD-PFK--Y----CDVVTTT  311 (529)
Q Consensus       250 ~~-pk-lIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~---~~-~~-~~~--~----aDiv~~S  311 (529)
                      .+ ++ ++++++++||+  ..   ++++|.++|++||+++|+|++|. ++...+   .. +. .+.  +    .+++++|
T Consensus       173 ~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s  251 (412)
T 1yaa_A          173 APEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQ-GFATGDLDKDAYAVRLGVEKLSTVSPVFVCQS  251 (412)
T ss_dssp             SCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCT-TTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEE
T ss_pred             CCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccc-cccCCcccchhHHHHHHHhcCCCCcceEEEec
Confidence            32 24 44448888886  33   46788999999999999999963 333221   00 00 111  2    3578899


Q ss_pred             cccccc--CCCCeEEE--e-----eCCCcchhH----HHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-----CchHH
Q 009673          312 THKSLR--GPRGGMIF--F-----KKDPVLGVE----LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-----SPEFK  373 (529)
Q Consensus       312 ~hK~l~--GprgG~i~--~-----~~~~~~~~~----l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-----~~~~~  373 (529)
                      +||+++  |+|.||++  +     ++      +    +.+.+........ ++++....+++..+|+...     ....+
T Consensus       252 ~sK~~~~~GlriG~~~~~~~~~~~~~------~~~~~l~~~l~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  324 (412)
T 1yaa_A          252 FAKNAGMYGERVGCFHLALTKQAQNK------TIKPAVTSQLAKIIRSEV-SNPPAYGAKIVAKLLETPELTEQWHKDMV  324 (412)
T ss_dssp             CTTTSCCGGGCEEEEEEECCSCTTHH------HHHHHHHHHHHHHHHTTT-SSCCHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             cCCCCCCcCCcceEEEEEecCCCCCH------HHHHHHHHHHHHHHhhcc-CCCChHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            999873  67779998  6     33      4    5555554222222 2323334444444554321     12356


Q ss_pred             HHHHHHHHHHHHHHHHHHhcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeE
Q 009673          374 VYQNKVVSNCRALASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGI  449 (529)
Q Consensus       374 ~~~~~i~~~a~~l~~~L~~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~i  449 (529)
                      +..+++.++++.+.+.|++.+    +++..+. .+.+.|+++     +...+..+|+++||.+..             ++
T Consensus       325 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~l~~~gi~v~~-------------~~  385 (412)
T 1yaa_A          325 TMSSRITKMRHALRDHLVKLGTPGNWDHIVNQ-CGMFSFTGL-----TPQMVKRLEETHAVYLVA-------------SG  385 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHC-CSSEEECCC-----CHHHHHHHHHHHCEECCT-------------TS
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCCCCeeeeccC-ceEEEeeCC-----CHHHHHHHHHhCCEEecc-------------Cc
Confidence            777888889999999998865    6655432 234444433     456677778889999831             47


Q ss_pred             EEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          450 RIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       450 Rig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ||++..     .+++|++++++.|+++++
T Consensus       386 Ris~~~-----~~~~~i~~~~~~l~~~~~  409 (412)
T 1yaa_A          386 RASIAG-----LNQGNVEYVAKAIDEVVR  409 (412)
T ss_dssp             EEEGGG-----CCTTTHHHHHHHHHHHHH
T ss_pred             EEEEcc-----CCHhHHHHHHHHHHHHHH
Confidence            998753     347999999999988765

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=99.87  E-value=2.9e-20  Score=191.44  Aligned_cols=310  Identities=15%  Similarity=0.126  Sum_probs=194.0

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHh---hc-
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA---IL-  189 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~a---ll-  189 (529)
                      .++.+++++...+...   +.+..+| . .+...++    ++++++++|++ ++   .+..++|++|+..++.+   +. 
T Consensus        45 ~~~~v~~a~~~~~~~~---~~~~~~y-~-~~~~~~l----~~~la~~~g~~-~~---v~~~~g~t~a~~~~~~~~~~~~~  111 (375)
T 2eh6_A           45 AYPKLTEALKEQVEKL---LHVSNLY-E-NPWQEEL----AHKLVKHFWTE-GK---VFFANSGTESVEAAIKLARKYWR  111 (375)
T ss_dssp             SCHHHHHHHHHHHHHC---SCCCTTB-C-CHHHHHH----HHHHHHTSSSC-EE---EEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhc---cccCccc-C-CHHHHHH----HHHHHhhcCCC-Ce---EEEeCchHHHHHHHHHHHHHHhc
Confidence            6899999998877532   1222222 2 2333344    37788889983 31   23345566999988865   45 


Q ss_pred             --CCC-CEEEEcCCCCCccccccccccccccccccce---EEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 009673          190 --KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY---FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP  263 (529)
Q Consensus       190 --~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~---~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p  263 (529)
                        +|| |+|+++++.|.+............+...+..   -....++      .+|+++|++.+++ ++++|++++++||
T Consensus       112 ~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~-~~~~v~~~~~~~~  184 (375)
T 2eh6_A          112 DKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAK------LNDIDSVYKLLDE-ETAGIIIEVIQGE  184 (375)
T ss_dssp             HTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEEC------TTCHHHHHTTCCT-TEEEEEECSEETT
T ss_pred             cCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCC------CchHHHHHHHhcC-CeEEEEEeCccCC
Confidence              889 9999999886543211000000000000100   0011111      2589999999986 8999999887777


Q ss_pred             C--CCC----HHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEeccccccc-CCCCeEEEeeCCCcch
Q 009673          264 R--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLG  333 (529)
Q Consensus       264 ~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l~-GprgG~i~~~~~~~~~  333 (529)
                      +  ..+    +++|.++|++||+++|+|++|. ++...+...  ..+. ..|++++|  |++. |+|.|++++++     
T Consensus       185 tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~d~~s~S--K~~~~g~~~G~~~~~~-----  256 (375)
T 2eh6_A          185 GGVNEASEDFLSKLQEICKEKDVLLIIDEVQT-GIGRTGEFYAYQHFNLKPDVIALA--KGLGGGVPIGAILARE-----  256 (375)
T ss_dssp             TTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTSCCEEEEEEH-----
T ss_pred             CCCcCCCHHHHHHHHHHHHHhCCEEEEecccc-CCCCCCcchhhhhcCCCCCEEEEc--ccccCCCCeEEEEEcH-----
Confidence            4  446    9999999999999999999976 332222100  0111 37888555  9884 45669999987     


Q ss_pred             hHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCC
Q 009673          334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP  413 (529)
Q Consensus       334 ~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~  413 (529)
                       ++.+.+.........+++.....++ ..+|+...     ++.+++.++++++.+.|++.+.....+  ...++++++..
T Consensus       257 -~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~-----~~~~~~~~~~~~l~~~L~~~~~~~~~~--~g~~~~~~~~~  327 (375)
T 2eh6_A          257 -EVAQSFTPGSHGSTFGGNPLACRAG-TVVVDEVE-----KLLPHVREVGNYFKEKLKELGKGKVKG--RGLMLGLELER  327 (375)
T ss_dssp             -HHHTTCCTTSCCCSSTTCHHHHHHH-HHHHHHHH-----HHHHHHHHHHHHHHHHHHHTTSSEEEE--ETTEEEEECSS
T ss_pred             -HHHhhhcCCCCCCCCCCCHHHHHHH-HHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCceE--EEEEEEEEEcC
Confidence             6777665532223344444444333 33565432     567788888999999998866433332  24567777753


Q ss_pred             CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          414 MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       414 ~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                         +..++.+.|.++||.+..    +     .++++||+++..    .+++|++++++.|+++
T Consensus       328 ---~~~~~~~~l~~~gi~~~~----~-----~~~~iRi~~~~~----~~~~~i~~~~~~l~~~  374 (375)
T 2eh6_A          328 ---ECKDYVLKALEKGLLINC----T-----AGKVLRFLPPLI----IQKEHIDRAISVLREI  374 (375)
T ss_dssp             ---CCHHHHHHHHHTTEECEE----E-----TTTEEEECCCTT----CCHHHHHHHHHHHHHH
T ss_pred             ---cHHHHHHHHHHCCCEEec----C-----CCCEEEEECCCC----CCHHHHHHHHHHHHHh
Confidence               346677777789999853    2     257899997643    4589999999999765

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=99.87  E-value=1.9e-21  Score=201.90  Aligned_cols=327  Identities=15%  Similarity=0.147  Sum_probs=198.2

Q ss_pred             cceeEecCC---C--C--CcHHHHHHHhh-hhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceee
Q 009673          103 KSLELIASE---N--F--TSRAVMEAVGS-CLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNV  172 (529)
Q Consensus       103 ~~i~L~ase---n--~--~~~~V~eal~~-~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V  172 (529)
                      +.|+|..+.   +  .  +++.|++++.. .+.+....+|+.   ..|   ..++++...+++....+.  +++.  ++|
T Consensus        27 ~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~---~~g---~~~lr~~la~~~~~~~~~~~~~~~--~~i   98 (397)
T 3fsl_A           27 DKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLP---MEG---LNCYRHAIAPLLFGADHPVLKQQR--VAT   98 (397)
T ss_dssp             CCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCC---TTC---CHHHHHHHHHHHHCTTCHHHHTTC--EEE
T ss_pred             CeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCC---CCc---hHHHHHHHHHHHhcCCcccccccc--eEE
Confidence            568887772   2  2  34899999988 765432334432   112   234443333444332221  2321  134


Q ss_pred             ecCChH-HHHHHH--HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC-CCCCCCCHHHHHHHhh
Q 009673          173 QPLSGS-PANFEV--YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAI  248 (529)
Q Consensus       173 ~~~sGs-~A~~~~--l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~-~~~~~iD~d~le~~i~  248 (529)
                      .+++|+ +|+..+  +.++++|||+|++.+|.|.++..        .+...|.  +++.++++ ++++.+|++++++.++
T Consensus        99 ~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~  168 (397)
T 3fsl_A           99 IQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVA--------IFAGAGF--EVSTYPWYDEATNGVRFNDLLATLK  168 (397)
T ss_dssp             EEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHH--------HHHHTTC--CEEEECCEETTTTEECHHHHHHHHT
T ss_pred             EEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHH--------HHHHcCC--ceEEEeeeeccCCcCcHHHHHHHHH
Confidence            556665 898888  45678999999999988765421        2334554  55566552 2468899999999998


Q ss_pred             hc--CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccc-ccCCCC------CcccEEEecccc
Q 009673          249 LF--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAAS-VVADPF------KYCDVVTTTTHK  314 (529)
Q Consensus       249 ~~--~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~-~~~~~~------~~aDiv~~S~hK  314 (529)
                      +.  +++++++++++||+  ..   ++++|.++|++||+++|+|++|. ++...+ ....++      ....+++.|+||
T Consensus       169 ~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK  247 (397)
T 3fsl_A          169 TLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQ-GFGAGMEEDAYAIRAIASAGLPALVSNSFSK  247 (397)
T ss_dssp             TCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCT-TSSSCTTGGGHHHHHHHHTTCCEEEEEECTT
T ss_pred             hCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCch-hhccCcccccHHHHHHHhcCCCEEEEecccc
Confidence            42  56788888888887  33   46689999999999999999964 333221 000011      123488899999


Q ss_pred             cc--cCCCCeEEEeeCCCcchhHHHhhh----cccccCCCCCCChHHHHHHHHHHHHHh-----cCchHHHHHHHHHHHH
Q 009673          315 SL--RGPRGGMIFFKKDPVLGVELESAI----NNAVFPGLQGGPHNHTIGGLAVCLKHA-----QSPEFKVYQNKVVSNC  383 (529)
Q Consensus       315 ~l--~GprgG~i~~~~~~~~~~~l~~~i----~~~~~p~~~g~p~~~~iaala~al~~~-----~~~~~~~~~~~i~~~a  383 (529)
                      ++  +|+|.||+++....   .++.+++    .........+.+...+ ++++.++...     .....++..+++.+++
T Consensus       248 ~~~~~G~riG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~  323 (397)
T 3fsl_A          248 IFSLYGERVGGLSVMCED---AEAAGRVLGQLKATVRRNYSSPPNFGA-QVVAAVLNDEALKASWLKEVEEMRTRILAMR  323 (397)
T ss_dssp             TTTCGGGCCEEEEEECSS---HHHHHHHHHHHHHHHHTTTSSCCSHHH-HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCcCCCeeEEEEecCC---HHHHHHHHHHHHHHHHhccCCCCHHHH-HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            87  58888999863210   0333222    1111112222222222 2222223210     0123467778889999


Q ss_pred             HHHHHHHHhc----CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccC
Q 009673          384 RALASRLVEL----GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTR  459 (529)
Q Consensus       384 ~~l~~~L~~~----G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~  459 (529)
                      +.+.+.|++.    |+.+..+. .+.+.|+++     +.+.+.++|+++||.+.    ||        + ||++..    
T Consensus       324 ~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~l~~~gi~v~----~g--------~-Ris~~~----  380 (397)
T 3fsl_A          324 QELVKVLSTEMPERNFDYLLNQ-RGMFSYTGL-----SAAQVDRLREEFGVYLI----AS--------G-RMCVAG----  380 (397)
T ss_dssp             HHHHHHHHHHCTTSCCTHHHHC-CSSEEECCC-----CHHHHHHHHHTTCEECC----TT--------C-EEEGGG----
T ss_pred             HHHHHHHHhcCCCCCceeecCC-ceEEEecCC-----CHHHHHHHHHhCCEEEC----CC--------C-eEEEEe----
Confidence            9999999885    66655432 234455444     45678888999999983    32        1 888643    


Q ss_pred             CCCHHHHHHHHHHHHHH
Q 009673          460 GFSEKEFVAIADFIHEG  476 (529)
Q Consensus       460 g~~~~d~~~la~~i~~~  476 (529)
                       +++++++++++.|+++
T Consensus       381 -~~~~~i~~~~~~l~~~  396 (397)
T 3fsl_A          381 -LNTANVQRVAKAFAAV  396 (397)
T ss_dssp             -CCTTTHHHHHHHHHHH
T ss_pred             -cCHhhHHHHHHHHHhh
Confidence             3458899999998765

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=99.87  E-value=4.5e-21  Score=199.92  Aligned_cols=289  Identities=16%  Similarity=0.144  Sum_probs=186.0

Q ss_pred             chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673          143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI  222 (529)
Q Consensus       143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~  222 (529)
                      .+..++++    +++++++|.+.     .+.+++|++|+..++.++++|||+|+++++.|++......    ......|.
T Consensus        63 ~~~~~~l~----~~la~~~g~~~-----~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~----~~~~~~g~  129 (398)
T 2rfv_A           63 NPTTDALE----KKLAVLERGEA-----GLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLS----HSMPKFGI  129 (398)
T ss_dssp             CHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHH----THHHHTTC
T ss_pred             ChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHH----HHHHHcCC
Confidence            34444444    78889999862     4667899999999999999999999999998865432100    00123344


Q ss_pred             eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673          223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD  300 (529)
Q Consensus       223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~  300 (529)
                        +++.++++      |++++++.+++ ++++|++++++||+  ..|+++|.++|+++|+++|+|++|..+...     .
T Consensus       130 --~~~~v~~~------d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~-----~  195 (398)
T 2rfv_A          130 --NVRFVDAA------KPEEIRAAMRP-ETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQ-----Q  195 (398)
T ss_dssp             --EEEEECTT------SHHHHHHHCCT-TEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTC-----C
T ss_pred             --EEEEeCCC------CHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC-----C
Confidence              56665542      89999999987 89999999888886  789999999999999999999998766432     1


Q ss_pred             CCC-cccEEEecccccccCC--C-CeEEEeeCCCcchhHHHh-hhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          301 PFK-YCDVVTTTTHKSLRGP--R-GGMIFFKKDPVLGVELES-AINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       301 ~~~-~aDiv~~S~hK~l~Gp--r-gG~i~~~~~~~~~~~l~~-~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      ++. ++|++++|+||++.||  | +|++++++      ++.+ .+.........++.+....+++..+++.     +..+
T Consensus       196 ~~~~~~di~~~s~sK~~~~~g~~~~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~  264 (398)
T 2rfv_A          196 PLQLGADIVVHSVTKYINGHGDVIGGIIVGKQ------EFIDQARFVGLKDITGGCMSPFNAWLTLRGVKT-----LGIR  264 (398)
T ss_dssp             GGGGTCSEEEEETTTTTTCSSCCCCEEEEECH------HHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT-----HHHH
T ss_pred             chhhCCcEEEEeCcccccCCCCceEEEEEECH------HHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhh-----HHHH
Confidence            222 5899999999998655  4 39999987      4544 4443221110123333333333334432     3455


Q ss_pred             HHHHHHHHHHHHHHHHhcC-c--------------EEecC--CCCCceEEEccCCCCCcHHHHHHhHhc---CCeEEcCC
Q 009673          376 QNKVVSNCRALASRLVELG-Y--------------KLVSG--GSDNHLVLVDLRPMGIDGARVEKILDM---ASITLNKN  435 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~~G-~--------------~v~~~--gt~~~~~~v~~~~~~i~~~~~~~~L~~---~GI~v~~~  435 (529)
                      .++..++++.+.+.|++.+ +              .+..+  .....++++++..   ......+++++   .||.++.+
T Consensus       265 ~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~l~~~~~~~~i~~~~G  341 (398)
T 2rfv_A          265 MERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAG---GLEAGRRMINSVELCLLAVSLG  341 (398)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETT---HHHHHHHHHTTCSSSEECSCCS
T ss_pred             HHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC---CHHHHHHHHHhCCcceeccCCC
Confidence            6677788888999988743 1              11110  0124566666642   12344445544   46666543


Q ss_pred             CC------CC---CC--C-------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          436 SV------PG---DK--S-------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       436 ~~------Pg---~~--~-------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      ..      |.   +.  +       ...++.|||++...+    ++++++++.++|+++
T Consensus       342 ~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~----~~~~i~~l~~al~~~  396 (398)
T 2rfv_A          342 DTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLED----PEDIINDLEHAIRKA  396 (398)
T ss_dssp             SSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSC----HHHHHHHHHHHHHHH
T ss_pred             CcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCC----HHHHHHHHHHHHHhh
Confidence            21      00   00  0       112578999987544    478888888887653

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.87  E-value=8.6e-21  Score=192.27  Aligned_cols=282  Identities=14%  Similarity=0.105  Sum_probs=185.9

Q ss_pred             HHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC
Q 009673          154 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE  233 (529)
Q Consensus       154 ~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~  233 (529)
                      ++.+++++|.+ +    .|.+++|++|+..++.++++|||+|+++++.|.++.....    ......|.  +++.++.  
T Consensus         4 ~~~la~~~g~~-~----~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~~~~~~g~--~~~~~~~--   70 (331)
T 1pff_A            4 EGKIAKLEHAE-A----CAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFE----HQLRKFGV--EVDFIDM--   70 (331)
T ss_dssp             HHHHHHHHTCS-E----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHH----THHHHTTC--EEEEECT--
T ss_pred             HHHHHHHhCCC-e----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHH----HHHHhcCC--EEEEeCC--
Confidence            36788899987 2    4667999999999999999999999999998866432110    00112343  5555543  


Q ss_pred             CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHH-hCCEEEEecccccccccccccCCCCC-cccEEE
Q 009673          234 STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADA-VGALLMMDMAHISGLVAASVVADPFK-YCDVVT  309 (529)
Q Consensus       234 ~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~-~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~  309 (529)
                          .|++++++.+++ ++++|++++++||+  ..|+++|.++|++ +|+++++|++|..|....     ++. ++|+++
T Consensus        71 ----~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~-----~~~~~~d~~~  140 (331)
T 1pff_A           71 ----AVPGNIEKHLKP-NTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTN-----PLDLGVDIVV  140 (331)
T ss_dssp             ----TSTTHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCC-----GGGGTCSEEE
T ss_pred             ----CCHHHHHHhhcC-CCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCC-----hhhcCCcEEE
Confidence                478899999986 88999998888775  7799999999999 999999999998765421     222 579999


Q ss_pred             ecccccccCC--C-CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 009673          310 TTTHKSLRGP--R-GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL  386 (529)
Q Consensus       310 ~S~hK~l~Gp--r-gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l  386 (529)
                      +|+||++.||  | +|+++++++     ++.+++......+..++++.....++..+++.     .....++..++.+.+
T Consensus       141 ~s~~K~~~~~~~r~~G~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~  210 (331)
T 1pff_A          141 HSATKYINGHTDVVAGLVCSRAD-----IIAKVKSQGIKDITGAIISPHDAWLITRGTLT-----LDMRVKRAAENAQKV  210 (331)
T ss_dssp             EETTTTTSSSSSCCCEEEEECHH-----HHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH
T ss_pred             EECccccCCCCCceEEEEEeCcH-----HHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch-----HHHHHHHHHHHHHHH
Confidence            9999998665  4 689998863     46666665443312223333232222233432     233455566777777


Q ss_pred             HHHHHhc-C--------------cEEecC--CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCC----------
Q 009673          387 ASRLVEL-G--------------YKLVSG--GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPG----------  439 (529)
Q Consensus       387 ~~~L~~~-G--------------~~v~~~--gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg----------  439 (529)
                      .+.|++. .              +++..+  ....+++.+.+.    +.+.+.+.|++.||.+...+..+          
T Consensus       211 ~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~  286 (331)
T 1pff_A          211 AEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD----GLEKAKKVLDNCHVVSLAVSLGGPESLIQHPAS  286 (331)
T ss_dssp             HHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS----SHHHHHHHHHTCSSSEECSSCCSSSCEEECHHH
T ss_pred             HHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC----CHHHHHHHHHhCCCceeccCCCCcceeeecchh
Confidence            7777653 1              111110  012334455443    46778899999999775432111          


Q ss_pred             --C---------CCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          440 --D---------KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       440 --~---------~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                        .         .....++.+||+++..+    ++++++.+.+.|+++
T Consensus       287 ~~~~~~~~~~~~~~g~~~~~iRis~~~~~----t~~~i~~l~~~l~~~  330 (331)
T 1pff_A          287 MTHAGVPKEEREAAGLTDNLIRLSVGCEN----VQDIIDDLKQALDLV  330 (331)
T ss_dssp             HTSTTSCHHHHHHTTCCTTEEEEECCSSC----HHHHHHHHHHHHHTC
T ss_pred             hcccccCHHHHHhcCCCCCeEEEEEecCC----HHHHHHHHHHHHHHh
Confidence              0         00122578999987644    589999999888653

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=99.87  E-value=6e-21  Score=200.20  Aligned_cols=354  Identities=15%  Similarity=0.175  Sum_probs=209.1

Q ss_pred             hcccCChH-HHHHHHHHHHHhhcceeEecC----C---CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHH
Q 009673           82 SLGEADPE-VCEIITKEKERQFKSLELIAS----E---NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC  153 (529)
Q Consensus        82 ~l~~~d~~-~~~~~~~e~~~~~~~i~L~as----e---n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a  153 (529)
                      .+...+|+ ++.+.+.-+......|||..+    +   .++.+.|++|....+.+..+.+|..   ..|.   .++.+.+
T Consensus        23 ~v~~~p~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p---~~G~---p~lr~ai   96 (420)
T 4h51_A           23 KIQAQAPDVIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLP---ISGY---QPFIDEA   96 (420)
T ss_dssp             TCCCCCCCHHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCC---TTCC---HHHHHHH
T ss_pred             CCCCCCCChHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCC---cCCh---HHHHHHH
Confidence            36666665 555544332222246898876    2   2456899999877666555555544   2233   3555444


Q ss_pred             HHHHHHHcCCCCC-CCceeeecCChHHHHHHHHH----hhcCCCCEEEEcCCCCCccccccccccccccccccce-EEEE
Q 009673          154 QKRALAAFNLDEN-KWGVNVQPLSGSPANFEVYT----AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESM  227 (529)
Q Consensus       154 ~~~la~~~g~~~~-~~~~~V~~~sGs~A~~~~l~----all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v  227 (529)
                      .+.+   ||-... .-...++..+||.|+..++.    ++++|||+|++++|.++.|..        .+...|.. +...
T Consensus        97 a~~~---~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~--------i~~~aG~~~V~~~  165 (420)
T 4h51_A           97 VKII---YGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYG--------VVKAAGWKNICTY  165 (420)
T ss_dssp             HHHH---HC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHH--------HHHHTTCCCEEEE
T ss_pred             HHHh---cCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHH--------HHHHcCCeEEEee
Confidence            4433   443321 11134556677777665443    346899999999998876632        23344542 2222


Q ss_pred             EcccCCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673          228 PYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD  300 (529)
Q Consensus       228 ~~~v~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~  300 (529)
                      ++ .+++++.+|.+.+.+.++..  ++++++.++++||+     ..++++|.++|+++++++++|++ |.++.+.+....
T Consensus       166 ~~-~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~-Y~~~~~~~~~~~  243 (420)
T 4h51_A          166 AY-YDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSA-YQGYASGSLDTD  243 (420)
T ss_dssp             EC-EEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEES-CTTTTTSCHHHH
T ss_pred             cc-ccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehh-hhhhccCCcccc
Confidence            22 23456788999988877642  45677778899997     23588999999999999999998 667765442211


Q ss_pred             CC------C-c-ccEEEecccccc--cCCCCeEEEeeCCCc-chhHHHhhhcccccCCCCCCChHHHHHHHHHHHH----
Q 009673          301 PF------K-Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPV-LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK----  365 (529)
Q Consensus       301 ~~------~-~-aDiv~~S~hK~l--~GprgG~i~~~~~~~-~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~----  365 (529)
                      .+      + + .-+++.|++|++  +|+|.|++++..+.. ....+...+......... .|..+.....+..+.    
T Consensus       244 ~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s-~~p~~~a~~~~~~l~d~~l  322 (420)
T 4h51_A          244 AYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYT-CPPAHGARLAHLILSNNEL  322 (420)
T ss_dssp             THHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTS-SCCHHHHHHHHHHHHSHHH
T ss_pred             hHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccC-cchHHHHHHHHHHhcCHHH
Confidence            11      0 1 127889999975  899999998876421 011122222222122222 333333222222222    


Q ss_pred             -HhcCchHHHHHHHHHHHHHHHHHHHHhcCcE----EecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCC
Q 009673          366 -HAQSPEFKVYQNKVVSNCRALASRLVELGYK----LVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD  440 (529)
Q Consensus       366 -~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~----v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~  440 (529)
                       .....+.+.+++++.++++.|.+.|++.|..    .+.+ ....+.++     +++.+++ ++|+++||.+    +|+ 
T Consensus       323 ~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~-q~GmF~~~-----gls~e~v-~~L~e~~Vy~----~~~-  390 (420)
T 4h51_A          323 RKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVIN-QIGMFSFL-----GLSKAQC-EYCQNHNIFI----TVS-  390 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHH-CCSSEEEC-----CCCHHHH-HHHHHTTEEC----CTT-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecC-CCceEEec-----CcCHHHH-HHHHhCCEEE----cCC-
Confidence             1111234677888899999999999986632    1221 11233332     3455555 5788999987    332 


Q ss_pred             CCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          441 KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       441 ~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                             | ||++.     |++++.+++++++|+++++..
T Consensus       391 -------g-Ris~A-----gl~~~ni~~~a~aI~~vvr~i  417 (420)
T 4h51_A          391 -------G-RANMA-----GLTHETALMLAQTINDAVRNV  417 (420)
T ss_dssp             -------C-EEEGG-----GCCHHHHHHHHHHHHHHHC--
T ss_pred             -------C-EEEec-----cCCHHHHHHHHHHHHHHHHHh
Confidence                   2 99865     356899999999999998753

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.87  E-value=1.3e-20  Score=199.20  Aligned_cols=289  Identities=16%  Similarity=0.095  Sum_probs=188.5

Q ss_pred             chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673          143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI  222 (529)
Q Consensus       143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~  222 (529)
                      ++..+++|    +++++++|.+.     .|.++||++|+..++.++++|||+|+++++.|++.+....    ..+...|.
T Consensus       113 ~~~~~~l~----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~----~~~~~~G~  179 (445)
T 1qgn_A          113 NPTTVVLE----EKISALEGAES-----TLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIE----TILPKMGI  179 (445)
T ss_dssp             CHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHH----HTGGGGTC
T ss_pred             ChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHH----HHHHHcCC
Confidence            45555555    77888999862     4667999999999999999999999999988876432100    01223354


Q ss_pred             eEEEEEcccCCCCCCCCHHHHHHHhhhcCC-cEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          223 YFESMPYRLDESTGLVDYDMLEKTAILFRP-KLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~p-klIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                        +++.++.+      |+++|++++++ ++ ++|++++++||+  ..|+++|.++|+++|+++++|++|..+..     .
T Consensus       180 --~v~~v~~~------d~~~l~~ai~~-~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~-----~  245 (445)
T 1qgn_A          180 --TATVIDPA------DVGALELALNQ-KKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLN-----Q  245 (445)
T ss_dssp             --EEEEECSS------CHHHHHHHHHH-SCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTT-----C
T ss_pred             --EEEEeCCC------CHHHHHHHhcc-CCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence              56665532      89999999988 78 999999888886  78999999999999999999999876542     2


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      .++. ++|++++|+||++.|+.   +|++++++      ++.+.+...... ..+.++......   ++..+  ..+..+
T Consensus       246 ~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~------~l~~~l~~~~~~-~g~~~~~~~a~~---~~~~l--~~l~~r  313 (445)
T 1qgn_A          246 KALALGADLVLHSATKFLGGHNDVLAGCISGPL------KLVSEIRNLHHI-LGGALNPNAAYL---IIRGM--KTLHLR  313 (445)
T ss_dssp             CTTTTTCSEEEECTTTTTTCSSSCCCEEEEECH------HHHHHHHHHHHH-HCCCCCHHHHHH---HHHHG--GGHHHH
T ss_pred             CccccCCEEEEECCcccccccccceEEEEEECH------HHHHHHHHHHHH-hCCCCCHHHHHH---HHHhH--HHHHHH
Confidence            3344 68999999999997765   89999987      666655432111 112222222111   12222  234556


Q ss_pred             HHHHHHHHHHHHHHHHhc-Cc-EEecCCC---------------CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCC-
Q 009673          376 QNKVVSNCRALASRLVEL-GY-KLVSGGS---------------DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSV-  437 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~~-G~-~v~~~gt---------------~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~-  437 (529)
                      .++..++++.+.+.|++. ++ .+..++-               ...++.+.+.....+...+...|+..+|.++.+.. 
T Consensus       314 ~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l~~~~i~~s~G~~~  393 (445)
T 1qgn_A          314 VQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIPYIAPSFGGCE  393 (445)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCSSS
T ss_pred             HHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhCCCceEeccCCCCc
Confidence            677888899999999884 55 3433321               23445555542100123344444434666544321 


Q ss_pred             -----CCC------------CCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          438 -----PGD------------KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       438 -----Pg~------------~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                           |..            .....++.||||+.        .||++.+.+.|++++.
T Consensus       394 sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG--------~Edid~li~~L~~al~  443 (445)
T 1qgn_A          394 SIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG--------VEDFDDLKADILQALD  443 (445)
T ss_dssp             CEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC--------SSCHHHHHHHHHHHHH
T ss_pred             eeeecccccccccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHHHh
Confidence                 100            00122478999864        3689999999888775

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=99.87  E-value=3.2e-20  Score=194.12  Aligned_cols=289  Identities=18%  Similarity=0.138  Sum_probs=190.4

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      |++..++++    +++++++|.+.     .|..++|++|+..++.++++|||+|++++|.|++......    ..+...|
T Consensus        60 ~~~~~~~l~----~~ia~~~g~~~-----~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~----~~~~~~g  126 (404)
T 1e5e_A           60 GNPTVSNLE----GKIAFLEKTEA-----CVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFE----HALTKFG  126 (404)
T ss_dssp             CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHH----THHHHTT
T ss_pred             cChHHHHHH----HHHHHHhCCCc-----EEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHH----HHHHHcC
Confidence            455555555    67788888862     3556888999999999999999999999998866432110    0123345


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHH-hCCEEEEeccccccccccccc
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADA-VGALLMMDMAHISGLVAASVV  298 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~-~g~~livD~ah~~Gli~~~~~  298 (529)
                      .  +++.++++      |++++++.+++ ++++|++++++||+  ..|+++|.++|++ +|+++++|++|..+...    
T Consensus       127 ~--~~~~v~~~------d~~~l~~~i~~-~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~----  193 (404)
T 1e5e_A          127 I--QVDFINTA------IPGEVKKHMKP-NTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMIT----  193 (404)
T ss_dssp             C--EEEEECTT------STTHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTC----
T ss_pred             C--EEEEECCC------CHHHHHHhcCC-CCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhC----
Confidence            4  66666543      78899999987 89999999998886  7799999999999 99999999998765421    


Q ss_pred             CCCCC-cccEEEecccccccC--CC-CeEEEeeCCCcchhHHHh-hhcccccCCCCCCChHHHHHHHHHHHHHhcCchHH
Q 009673          299 ADPFK-YCDVVTTTTHKSLRG--PR-GGMIFFKKDPVLGVELES-AINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK  373 (529)
Q Consensus       299 ~~~~~-~aDiv~~S~hK~l~G--pr-gG~i~~~~~~~~~~~l~~-~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~  373 (529)
                       .++. ++|++++|+||++.|  .| +|++++++      ++.+ ++.........++.+....++...+++     ...
T Consensus       194 -~~~~~~~di~~~S~sK~~~~~g~ri~G~~~~~~------~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~-----~~~  261 (404)
T 1e5e_A          194 -NPVDFGVDVVVHSATKYINGHTDVVAGLICGKA------DLLQQIRMVGIKDITGSVISPHDAWLITRGLS-----TLN  261 (404)
T ss_dssp             -CGGGGTCSEEEEETTTTTTCSSCCCCEEEEECH------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHT-----THH
T ss_pred             -CccccCCEEEEEcCccccCCCCCCeEEEEEECH------HHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHh-----HHH
Confidence             2233 589999999999854  45 49999988      5555 665543221012223222222222343     234


Q ss_pred             HHHHHHHHHHHHHHHHHHhcC-cE-EecCC---------------CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCC
Q 009673          374 VYQNKVVSNCRALASRLVELG-YK-LVSGG---------------SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNS  436 (529)
Q Consensus       374 ~~~~~i~~~a~~l~~~L~~~G-~~-v~~~g---------------t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~  436 (529)
                      .+.++..++++.+.+.|++.. +. +..++               ....++.+++..   ..+++.++|++.||.+....
T Consensus       262 ~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~l~~~~i~~~~~s  338 (404)
T 1e5e_A          262 IRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS---GFEGAKKLLDNLKLITLAVS  338 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT---HHHHHHHHHHTCSSSEESSC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCC---CHHHHHHHHHhCCCceeccC
Confidence            556677888888888888753 21 11110               013455556642   13567788899998543321


Q ss_pred             CCCC----------C------------CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          437 VPGD----------K------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       437 ~Pg~----------~------------~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                       .|.          .            ....++.|||++..        +|++++.+.|++++...
T Consensus       339 -~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~--------e~~~~li~~l~~al~~~  395 (404)
T 1e5e_A          339 -LGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI--------EDADELIADFKQGLDAL  395 (404)
T ss_dssp             -CCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS--------SCHHHHHHHHHHHHHHH
T ss_pred             -CCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC--------CCHHHHHHHHHHHHHHH
Confidence             111          0            00115789999642        78888888888887643

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.87  E-value=1.4e-20  Score=198.79  Aligned_cols=291  Identities=13%  Similarity=0.062  Sum_probs=187.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceE
Q 009673          147 DELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF  224 (529)
Q Consensus       147 d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~  224 (529)
                      .++...+++++++++|++++    ++.+++|+ .++.+++.++ +++||+|+++++.|.+......    ......|.  
T Consensus       107 ~~~~~~~~~~la~~~g~~~~----~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~----~~a~~~G~--  176 (438)
T 1wyu_A          107 LQATFEYQTMIAELAGLEIA----NASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLR----AYLEAVGA--  176 (438)
T ss_dssp             HHHHHHHHHHHHHHHTSSEE----CSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHH----HHHHHTTC--
T ss_pred             HHHHHHHHHHHHHHhCCCcc----ceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHH----HHHHHCCC--
Confidence            34455667999999999864    44456665 4445444443 6899999999988755421100    00122454  


Q ss_pred             EEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecc-cccccccccccCCC
Q 009673          225 ESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMA-HISGLVAASVVADP  301 (529)
Q Consensus       225 ~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~a-h~~Gli~~~~~~~~  301 (529)
                      +++.++.  +++.+|+++    +++ ++++|+++++ |++  ..|+++|.++|+++|+++++|.. +..|..     ..+
T Consensus       177 ~v~~v~~--~~~~~d~~~----i~~-~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~-----~~~  243 (438)
T 1wyu_A          177 KLLTLPL--EGGRTPLPE----VGE-EVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVL-----KPP  243 (438)
T ss_dssp             EEEEECC--BTTBCCCCC----CCT-TEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTB-----CCH
T ss_pred             EEEEEcC--cCCccCHHH----hCC-CeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCc-----CCC
Confidence            6666655  356788776    555 7899999887 554  77999999999999999997754 444432     111


Q ss_pred             CC-cccEEEecccc-----cccCCCCeEEEeeCCCcchhHHHhhhcccc--------------c---------CCCCCCC
Q 009673          302 FK-YCDVVTTTTHK-----SLRGPRGGMIFFKKDPVLGVELESAINNAV--------------F---------PGLQGGP  352 (529)
Q Consensus       302 ~~-~aDiv~~S~hK-----~l~GprgG~i~~~~~~~~~~~l~~~i~~~~--------------~---------p~~~g~p  352 (529)
                      -. ++|++++|.||     |+.||++|++++++      ++.+.+....              +         ....+++
T Consensus       244 ~~~g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~------~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~  317 (438)
T 1wyu_A          244 GAYGADIAVGDGQSLGLPMGFGGPHFGFLATKK------AFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKS  317 (438)
T ss_dssp             HHHTCSEEEEECTTTTCCCGGGCSCCEEEEECG------GGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSC
T ss_pred             ccCCCCEEEECCcccCCCccCCCCCeeEEEEcH------HHHHhCCCceeccccccCCCcceeeeccccccccchhcccC
Confidence            11 58999999777     68899779999987      4444331100              0         0001233


Q ss_pred             hH---HHHHHHHHH--HHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHh
Q 009673          353 HN---HTIGGLAVC--LKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILD  426 (529)
Q Consensus       353 ~~---~~iaala~a--l~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~  426 (529)
                      +.   ..+++++++  +......++++..+++.++++++.+.|++. |+++..+.  ..+.++.++. +.+..++.+.|.
T Consensus       318 ~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~--~~~~~~~~~~-~~~~~~~~~~L~  394 (438)
T 1wyu_A          318 NITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPK--PFFNEFALAL-PKDPEAVRRALA  394 (438)
T ss_dssp             CCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCS--SBCSEEEEEC-SSCHHHHHHHHH
T ss_pred             CccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCC--CeEEEEEEeC-CCCHHHHHHHHH
Confidence            22   344444444  544443457788889999999999999986 99987642  2222222321 235678888888


Q ss_pred             cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          427 MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       427 ~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      +.||.+..  .|+..  +.++.|||++...+    +++|++++++.|++++
T Consensus       395 ~~gi~v~~--~~~~~--~~~~~lRis~~~~~----t~edi~~~~~~l~~~l  437 (438)
T 1wyu_A          395 ERGFHGAT--PVPRE--YGENLALFAATELH----EEEDLLALREALKEVL  437 (438)
T ss_dssp             HTTCCCCE--ECCTT--SCSSEEEEECCTTC----CHHHHHHHHHHHHHHC
T ss_pred             HCCceecc--ccccc--cCCCeEEEEecccC----CHHHHHHHHHHHHHHh
Confidence            88998721  01111  12578999987544    4899999999987653

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=99.86  E-value=5.5e-21  Score=199.70  Aligned_cols=345  Identities=16%  Similarity=0.149  Sum_probs=199.8

Q ss_pred             hhcccCChH-HHHHHHHHHHHh-hcceeEecCCC---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHH
Q 009673           81 YSLGEADPE-VCEIITKEKERQ-FKSLELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK  155 (529)
Q Consensus        81 ~~l~~~d~~-~~~~~~~e~~~~-~~~i~L~asen---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~  155 (529)
                      .++...+++ ++.+.+...... .+.|+|..++.   ..++.+.+++..... ....+|..      .....++++...+
T Consensus        18 ~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a~~-~~~~~y~~------~~g~~~lr~~ia~   90 (409)
T 4eu1_A           18 GPGSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQATL-GTNMDYAP------VTGIASFVEEAQK   90 (409)
T ss_dssp             ---------CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTCCC-CSCCCCCC------TTCCHHHHHHHHH
T ss_pred             hcCCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhcCc-cccccCCC------CCCcHHHHHHHHH
Confidence            345566666 566655444322 35688876653   346667777765521 11223322      1122355533333


Q ss_pred             HHHHHcCCC-----CCCCceeeecCChHHHHHHH---HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEE
Q 009673          156 RALAAFNLD-----ENKWGVNVQPLSGSPANFEV---YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESM  227 (529)
Q Consensus       156 ~la~~~g~~-----~~~~~~~V~~~sGs~A~~~~---l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v  227 (529)
                      ++   +|.+     ++++ ..+++.+|++++..+   +.++++|||+|++++|.|.++..        .+...|.  +++
T Consensus        91 ~~---~~~~~~~~~~~~i-~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~  156 (409)
T 4eu1_A           91 LC---FGPTCAALRDGRI-ASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHES--------IFAKAGM--ELT  156 (409)
T ss_dssp             HH---HCSSCHHHHTTCE-EEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHH--------HHHHTTC--EEE
T ss_pred             HH---cCCCchhhccCce-eeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHH--------HHHHcCC--eEE
Confidence            33   3655     3322 112345555676654   44567999999999998865531        2344565  666


Q ss_pred             EcccC-CCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEeccccccccccccc-
Q 009673          228 PYRLD-ESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-  298 (529)
Q Consensus       228 ~~~v~-~~~~~iD~d~le~~i~~~--~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-  298 (529)
                      .++++ .+++.+|++++++.+++.  +++++++++|+||+  ..+   +++|.++|+++|+++|+|++|. ++...+.. 
T Consensus       157 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~-~~~~~~~~~  235 (409)
T 4eu1_A          157 PYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQ-GFATGQLDY  235 (409)
T ss_dssp             EECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCT-TTTTSCHHH
T ss_pred             EEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccc-ccccCCccc
Confidence            76663 346789999999999742  45666778899987  444   6669999999999999999954 44433210 


Q ss_pred             -CCC---C-C--cccEEEecccccc--cCCCCeEE--EeeCCCcchhH----HHhhhcccccCCCCCCChHHHHHHHHHH
Q 009673          299 -ADP---F-K--YCDVVTTTTHKSL--RGPRGGMI--FFKKDPVLGVE----LESAINNAVFPGLQGGPHNHTIGGLAVC  363 (529)
Q Consensus       299 -~~~---~-~--~aDiv~~S~hK~l--~GprgG~i--~~~~~~~~~~~----l~~~i~~~~~p~~~g~p~~~~iaala~a  363 (529)
                       ..+   + .  ...++++|++|++  +|+|.||+  +..++     +    +.+.+.........+.+.. ..++++.+
T Consensus       236 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~  309 (409)
T 4eu1_A          236 DAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASA-----EEAKRLVSQLALLIRPMYNNPPLY-GAWVVSSI  309 (409)
T ss_dssp             HTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSH-----HHHHHHHHHHHHHHHHHHSSCCHH-HHHHHHHH
T ss_pred             chHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCH-----HHHHHHHHHHHHHHhhhcCCCChH-HHHHHHHH
Confidence             000   0 1  1237889999986  68888996  54442     4    4444433221222223233 33333334


Q ss_pred             HHHhc-----CchHHHHHHHHHHHHHHHHHHHHhcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcC
Q 009673          364 LKHAQ-----SPEFKVYQNKVVSNCRALASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNK  434 (529)
Q Consensus       364 l~~~~-----~~~~~~~~~~i~~~a~~l~~~L~~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~  434 (529)
                      ++...     ....++.++++.++++.+.+.|++.|    +.+..+. .+.+.|+++     +.+.+.++|+++||.+. 
T Consensus       310 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~ll~~~gv~v~-  382 (409)
T 4eu1_A          310 LKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQ-VGMMAYTGL-----TREQVELLRSEYHIYMT-  382 (409)
T ss_dssp             HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHS-CSSEEECCC-----CHHHHHHHHHHHCEECC-
T ss_pred             hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCC-ceEEEEeCC-----CHHHHHHHHHcCCEEEc-
Confidence            44210     12246677888999999999999877    5544331 234445333     45667777888999983 


Q ss_pred             CCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          435 NSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       435 ~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                         |+         .||++..     .+++|++++++.|++++
T Consensus       383 ---p~---------~Ri~~~~-----~~~~~i~~~~~~l~~~l  408 (409)
T 4eu1_A          383 ---LN---------GRAAVSG-----LNSTNVEYVSQAIHNVT  408 (409)
T ss_dssp             ---TT---------CEEEGGG-----CCTTTHHHHHHHHHHHH
T ss_pred             ---CC---------CEEEEEe-----cCHhhHHHHHHHHHHHh
Confidence               32         3777643     34688999999998765

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=99.86  E-value=4.6e-21  Score=208.06  Aligned_cols=340  Identities=14%  Similarity=0.115  Sum_probs=204.0

Q ss_pred             ceeEecCCC-CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC--CCCCceeeecCChH-H
Q 009673          104 SLELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGS-P  179 (529)
Q Consensus       104 ~i~L~asen-~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~--~~~~~~~V~~~sGs-~  179 (529)
                      .|+|..+++ +.++.+.+++...+..   .+||...  ++.   ...++++..++.+.++..  .... .+|.+++|+ +
T Consensus       106 ~i~l~~g~~~~~~~~~~~al~~~~~~---~~Y~~~~--g~~---~lr~~ia~~~~~~~~~~~~~~~~~-~~I~~t~G~~e  176 (546)
T 2zy4_A          106 SLSYVRDQLGLDPAAFLHEMVDGILG---CNYPVPP--RML---NISEKIVRQYIIREMGADAIPSES-VNLFAVEGGTA  176 (546)
T ss_dssp             HHHHHHHTSCCCHHHHHHHHHHHHHT---CSCCSSS--SCC---HHHHHHHHHHHHHHTTCTTSCGGG-EEEEEEEHHHH
T ss_pred             hhecccCCCCCCChHHHHHHHHhhhc---CCCCCCc--CCH---HHHHHHHHHHHHHhccCCCCCCCc-ceEEEECCHHH
Confidence            355554554 4566777777665531   2344311  111   233445556666666442  1001 367778887 8


Q ss_pred             HHHHHHHh-----hcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCc
Q 009673          180 ANFEVYTA-----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPK  253 (529)
Q Consensus       180 A~~~~l~a-----ll~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pk  253 (529)
                      ++..++.+     +++|||+|++++|.|.++..        ...+.+.+.++++++++++ ++.+|+++|++.++. +++
T Consensus       177 al~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~--------~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k  247 (546)
T 2zy4_A          177 AMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIE--------IPELAQYALEEVAINADPSLNWQYPDSELDKLKDP-AIK  247 (546)
T ss_dssp             HHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHH--------HHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGST-TEE
T ss_pred             HHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHH--------HHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCC-CCe
Confidence            88888877     58999999999998755421        1112332346777777654 367999999988765 789


Q ss_pred             EEEEcCCCCCC--CCC---HHHHHHHH--HHhCCEEEEecccccccccccccCCCC---CcccEEEecccccc--cCCCC
Q 009673          254 LIIAGASAYPR--DFD---YPRMRQIA--DAVGALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSL--RGPRG  321 (529)
Q Consensus       254 lIi~~~s~~p~--~~d---~~~i~~ia--~~~g~~livD~ah~~Gli~~~~~~~~~---~~aDiv~~S~hK~l--~Gprg  321 (529)
                      +|++++|+||+  ..+   +++|.++|  +++|++||+|++|. ++.. + ..+..   ...++++.|+||++  +|+|.
T Consensus       248 ~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~-~~~~-~-~~s~~~~~~~~~i~~~S~SK~~g~~GlRi  324 (546)
T 2zy4_A          248 IFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYG-TFAD-D-FQSLFAICPENTLLVYSFSKYFGATGWRL  324 (546)
T ss_dssp             EEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTG-GGST-T-CCCHHHHCGGGEEEEEESTTTTTCGGGCE
T ss_pred             EEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcch-hhcc-c-CcCHHHhCCCCEEEEEeCccccCCCCcce
Confidence            99988999997  444   66788888  77899999999965 3332 1 11111   13568999999987  68999


Q ss_pred             eEEEeeCCCcchhHHHhhhcccc-----------------------------------cCCC-CCCChHHHHHHHHHHH-
Q 009673          322 GMIFFKKDPVLGVELESAINNAV-----------------------------------FPGL-QGGPHNHTIGGLAVCL-  364 (529)
Q Consensus       322 G~i~~~~~~~~~~~l~~~i~~~~-----------------------------------~p~~-~g~p~~~~iaala~al-  364 (529)
                      ||++++++     ++.+++....                                   .... .+.+...+.+....++ 
T Consensus       325 G~~~~~~~-----~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~  399 (546)
T 2zy4_A          325 GVVAAHQQ-----NVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLF  399 (546)
T ss_dssp             EEEEEESS-----CHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHH
T ss_pred             EEEEECCH-----HHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHH
Confidence            99999874     2433331100                                   0011 1222333332111011 


Q ss_pred             HHhc-CchH-HHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCC---------------CC-cHHHHHHhHh
Q 009673          365 KHAQ-SPEF-KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM---------------GI-DGARVEKILD  426 (529)
Q Consensus       365 ~~~~-~~~~-~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~---------------~i-~~~~~~~~L~  426 (529)
                      ..+. ...+ ++.++.+.++++.+.+.|. .++.+.. ...++++|+++...               +. +.+.+.++|+
T Consensus       400 all~~~~~~~~~~r~~~~~r~~~l~~~L~-~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~  477 (546)
T 2zy4_A          400 ALMDEADEYKHTLKQLIRRRETTLYRELG-MPPLRDE-NAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIAD  477 (546)
T ss_dssp             HHHCTTCHHHHHHHHHHHHHHHHHHGGGT-SSCCCCT-TBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHH
T ss_pred             HHHhccHHHHHHHHHHHHHHHHHHHHhcC-CCcccCC-CCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHH
Confidence            1111 1233 5556666777777777774 4443222 22345667776310               11 2345778889


Q ss_pred             cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          427 MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       427 ~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      ++||.+.+    |......++++||++..     .++++++++++.|++++...
T Consensus       478 ~~gV~v~p----G~~F~~~~~~iRis~~~-----~~~e~i~~~~~~l~~~l~~~  522 (546)
T 2zy4_A          478 ETGIVLLP----GRGFGSNRPSGRASLAN-----LNEYEYAAIGRALRKMADEL  522 (546)
T ss_dssp             HHSCCCEE----SSCTTCSSCEEEEESSS-----SCHHHHHHHHHHHHHHHHHH
T ss_pred             HCCEEEeC----ccccCCCCCeEEEEecc-----CCHHHHHHHHHHHHHHHHHH
Confidence            99999954    44311235689999742     35899999999999987654

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.86  E-value=1.2e-19  Score=190.28  Aligned_cols=291  Identities=16%  Similarity=0.150  Sum_probs=185.5

Q ss_pred             hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccce
Q 009673          144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY  223 (529)
Q Consensus       144 ~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~  223 (529)
                      +..++++    +++++++|.+.     .+.+++|++|+..++.++++|||+|+++++.|.+.+....    ..+...|. 
T Consensus        56 ~~~~~l~----~~la~~~g~~~-----~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~----~~~~~~g~-  121 (412)
T 2cb1_A           56 PTAKALE----ERLKALEGALE-----AVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFG----QVLSLMGV-  121 (412)
T ss_dssp             HHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHH----HTTTTTTC-
T ss_pred             hHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHH----HHHHHcCC-
Confidence            4445555    77888999862     3456788899999999999999999999998865432110    01223443 


Q ss_pred             EEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCC
Q 009673          224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP  301 (529)
Q Consensus       224 ~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~  301 (529)
                       +++.+++       |+++|++.+++ ++++|++++++||+  ..|+++|.++|+++|+++|+|++|..+...    ..+
T Consensus       122 -~~~~~~~-------~~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~----~~~  188 (412)
T 2cb1_A          122 -TVRYVDP-------EPEAVREALSA-KTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGAL----CRP  188 (412)
T ss_dssp             -EEEEECS-------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTS----CCG
T ss_pred             -EEEEECC-------CHHHHHHHhcc-CCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccc----CCc
Confidence             5666543       38999999987 89999998888775  789999999999999999999998765111    122


Q ss_pred             CC-cccEEEecccccccCCC--CeEEEeeC-CCcc-----h----------------hHHHhhhcccccCCCCCCChHHH
Q 009673          302 FK-YCDVVTTTTHKSLRGPR--GGMIFFKK-DPVL-----G----------------VELESAINNAVFPGLQGGPHNHT  356 (529)
Q Consensus       302 ~~-~aDiv~~S~hK~l~Gpr--gG~i~~~~-~~~~-----~----------------~~l~~~i~~~~~p~~~g~p~~~~  356 (529)
                      .. ++|++++|+||++.||.  .|++++.+ ....     .                .++.+.++...... .|......
T Consensus       189 ~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~-~g~~~~~~  267 (412)
T 2cb1_A          189 LAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSL-CGMALSPF  267 (412)
T ss_dssp             GGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTT-TCCCCCHH
T ss_pred             cccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHh-cCCCCChH
Confidence            22 58999999999997764  36555544 2100     0                02223332221111 11111111


Q ss_pred             HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEe-cCCC---------------CCceEEEccCCCCCcHH
Q 009673          357 IGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLV-SGGS---------------DNHLVLVDLRPMGIDGA  419 (529)
Q Consensus       357 iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~-~~gt---------------~~~~~~v~~~~~~i~~~  419 (529)
                      .++  .++..+  ..+..+.++..++++++.+.|.+ .++.++ .++.               ...++.+.+   + +.+
T Consensus       268 ~a~--~~~~~l--~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~---~-~~~  339 (412)
T 2cb1_A          268 NAY--LLFQGL--ETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL---G-DLE  339 (412)
T ss_dssp             HHH--HHHHHG--GGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC---S-SHH
T ss_pred             HhH--HHHcCC--chHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe---C-CHH
Confidence            111  122222  23456667778899999999988 477744 2321               123444444   3 667


Q ss_pred             HHHHhHhcCCeEEcCCC---------CCCCCC------------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          420 RVEKILDMASITLNKNS---------VPGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       420 ~~~~~L~~~GI~v~~~~---------~Pg~~~------------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      .+.+.|++.||.+ ..+         .|....            ...++.||+++...++    +++++.+.+.|++
T Consensus       340 ~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~----~~~i~~l~~al~~  411 (412)
T 2cb1_A          340 RASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDP----LDLLALFEEALEA  411 (412)
T ss_dssp             HHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCH----HHHHHHHHHHHHC
T ss_pred             HHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCH----HHHHHHHHHHHhh
Confidence            8889999999998 552         121100            0115789999876554    7888888887753

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=99.86  E-value=3.9e-20  Score=196.12  Aligned_cols=350  Identities=16%  Similarity=0.168  Sum_probs=205.9

Q ss_pred             hcccCChH-HHHHHHHHHHHhh-cceeEecCCC-------CCcHHHHHHHhhhh--hccCCCCCCCCCCCCCchhHHHHH
Q 009673           82 SLGEADPE-VCEIITKEKERQF-KSLELIASEN-------FTSRAVMEAVGSCL--TNKYSEGLPGKRYYGGNEYIDELE  150 (529)
Q Consensus        82 ~l~~~d~~-~~~~~~~e~~~~~-~~i~L~asen-------~~~~~V~eal~~~l--~~~y~~G~p~~r~~~g~~~~d~lE  150 (529)
                      .+...+++ ++.+...-..... ..|+|..+..       ++.++|.+++....  ......+|+.   ..|   ..+++
T Consensus        27 ~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~---~~G---~~~lr  100 (448)
T 3meb_A           27 GFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPP---VAG---FPLFL  100 (448)
T ss_dssp             TCCCCCCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCC---TTC---CHHHH
T ss_pred             cCCCCCCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCC---Ccc---hHHHH
Confidence            35555554 4554433222222 3588865432       34578888865443  1122223332   112   23444


Q ss_pred             HHHHHHHHHH-cCCC-----CCCCceeeecCChHHHHHH--HHHhhcCCCCEEEEcCCCCCccccccccccccccc----
Q 009673          151 TLCQKRALAA-FNLD-----ENKWGVNVQPLSGSPANFE--VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS----  218 (529)
Q Consensus       151 ~~a~~~la~~-~g~~-----~~~~~~~V~~~sGs~A~~~--~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~----  218 (529)
                          +.++++ +|.+     ++++ +.+|+.+|++|+..  .+.++++|||+|++++|.|.++..        .+.    
T Consensus       101 ----~~ia~~l~g~~~~~~~~~~i-~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~--------~~~~~~~  167 (448)
T 3meb_A          101 ----EAAQFLMFGKDSKAAQEGRI-ASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYG--------IYDKVFN  167 (448)
T ss_dssp             ----HHHHHHHHCTTCHHHHTTCE-EEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHH--------HHHHHHC
T ss_pred             ----HHHHHHhcCCCccccCcCcE-EEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHH--------HHHhhHH
Confidence                333444 4876     3332 22335556689876  567788999999999998876532        233    


Q ss_pred             cccceEEEEEccc-CCC-CCCCCHHHHHHHhhh--cCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccc
Q 009673          219 GTSIYFESMPYRL-DES-TGLVDYDMLEKTAIL--FRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHI  289 (529)
Q Consensus       219 ~~g~~~~~v~~~v-~~~-~~~iD~d~le~~i~~--~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~  289 (529)
                      ..|.  +++.+++ +++ ++.+|+|++++.+++  .+++++++++++||+  ..+   +++|+++|+++|+++++|++| 
T Consensus       168 ~~G~--~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay-  244 (448)
T 3meb_A          168 KLKV--PYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAY-  244 (448)
T ss_dssp             TTTS--CCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESC-
T ss_pred             hCCC--eEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEeccc-
Confidence            4454  5666666 544 589999999999985  246777888899987  344   667999999999999999994 


Q ss_pred             ccccccccc--CCCC-----Ccc-cEEEecccccc--cCCCCeEE--Ee--------eCCCcchhHHHhhhcccccCCCC
Q 009673          290 SGLVAASVV--ADPF-----KYC-DVVTTTTHKSL--RGPRGGMI--FF--------KKDPVLGVELESAINNAVFPGLQ  349 (529)
Q Consensus       290 ~Gli~~~~~--~~~~-----~~a-Div~~S~hK~l--~GprgG~i--~~--------~~~~~~~~~l~~~i~~~~~p~~~  349 (529)
                      .++...+..  ..++     .+. .+++.|+||++  .|+|.|++  ++        .++. ...++.+.+.........
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~-~~~~l~~~l~~~~~~~~~  323 (448)
T 3meb_A          245 QGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKA-LSAAMVSGMTLQIRKTWS  323 (448)
T ss_dssp             TTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHH-HHHHHHHHHHHHHHTTTS
T ss_pred             ccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHH-HHHHHHHHHHHHHhcccC
Confidence            444433210  0001     122 37789999986  58888997  55        3210 000233333322222222


Q ss_pred             CCChHHHHHHHHHHHHHhc-----CchHHHHHHHHHHHHHHHHHHHHhcCcE---------EecCCCCCceEEEccCCCC
Q 009673          350 GGPHNHTIGGLAVCLKHAQ-----SPEFKVYQNKVVSNCRALASRLVELGYK---------LVSGGSDNHLVLVDLRPMG  415 (529)
Q Consensus       350 g~p~~~~iaala~al~~~~-----~~~~~~~~~~i~~~a~~l~~~L~~~G~~---------v~~~gt~~~~~~v~~~~~~  415 (529)
                      +.|.. ...+++.+|....     ....++..+++.++++.+.+.|++.|++         +..+ ....+.|+++    
T Consensus       324 ~~~~~-~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~----  397 (448)
T 3meb_A          324 MSAIH-GAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILT-AIGMFTFTGL----  397 (448)
T ss_dssp             SCCHH-HHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHH-CCSSEEECCC----
T ss_pred             CccHH-HHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCC-CceEEEecCC----
Confidence            33333 3333333332110     0224667788889999999999886432         2222 1234445444    


Q ss_pred             CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          416 IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       416 i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                       +.+.+..+|+++||.+.    ||.        .||++..     +++++++++++.|+++++
T Consensus       398 -~~~~~~~ll~~~gV~v~----~G~--------gRis~a~-----~~~~~i~~~~~~l~~~l~  442 (448)
T 3meb_A          398 -TPEHVDYLKEKWSIYLV----KAG--------GRMSMCG-----LTESNCDYVAEAIHDAVT  442 (448)
T ss_dssp             -CHHHHHHHHHHHCEEEC----SGG--------GEEEGGG-----CCTTTHHHHHHHHHHHHH
T ss_pred             -CHHHHHHHHHhCCEEEe----CCC--------cEEEEec-----CCHHHHHHHHHHHHHHHH
Confidence             45667777789999993    432        2988743     346789999999999886

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.86  E-value=9.7e-21  Score=198.08  Aligned_cols=288  Identities=18%  Similarity=0.131  Sum_probs=186.0

Q ss_pred             chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673          143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI  222 (529)
Q Consensus       143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~  222 (529)
                      ++..+++|    +.+++++|.+.     .|.++||++|+..++. +++|||+|+++++.|++++...    .......|.
T Consensus        66 ~p~~~~l~----~~la~~~g~~~-----~i~~~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~----~~~~~~~G~  131 (403)
T 3cog_A           66 NPTRNCLE----KAVAALDGAKY-----CLAFASGLAATVTITH-LLKAGDQIICMDDVYGGTNRYF----RQVASEFGL  131 (403)
T ss_dssp             CHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHH----HHTGGGGTC
T ss_pred             CchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHH----HHHHHHcCC
Confidence            34455665    67888898862     4667999999999988 8999999999999887643211    001123454


Q ss_pred             eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhC-CEEEEecccccccccccccC
Q 009673          223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVG-ALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g-~~livD~ah~~Gli~~~~~~  299 (529)
                        +++.++++      |++++++.+++ ++++|++++++||+  ..|+++|.++|+++| +++++|++|..+..     .
T Consensus       132 --~v~~v~~~------d~~~l~~~i~~-~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~-----~  197 (403)
T 3cog_A          132 --KISFVDCS------KIKLLEAAITP-ETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYF-----Q  197 (403)
T ss_dssp             --EEEEECTT------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTT-----C
T ss_pred             --EEEEECCC------CHHHHHHhcCc-CCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCccccc-----C
Confidence              66665542      89999999987 89999999898886  789999999999999 99999999776532     1


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      .++. ++|+++.|+||++.||.   +|+++++++     ++.+++.....++ .++++....+++..+++     .+..+
T Consensus       198 ~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~-----~l~~~l~~~~~~~-g~~~~~~~~~~~~~~l~-----~l~~r  266 (403)
T 3cog_A          198 RPLALGADISMYSATKYMNGHSDVVMGLVSVNCE-----SLHNRLRFLQNSL-GAVPSPIDCYLCNRGLK-----TLHVR  266 (403)
T ss_dssp             CTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCH-----HHHHHHHHHHHHH-CCCCCHHHHHHHHHHHT-----THHHH
T ss_pred             CccccCCeEEEEcChhhccCCCCCeEEEEEECcH-----HHHHHHHHHHHhc-CCCCCHHHHHHHHhhhh-----HHHHH
Confidence            2333 68999999999998764   599999643     6666665432221 11222222222222332     23455


Q ss_pred             HHHHHHHHHHHHHHHHhcC---------------cEEecC--CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcC---C
Q 009673          376 QNKVVSNCRALASRLVELG---------------YKLVSG--GSDNHLVLVDLRPMGIDGARVEKILDMASITLNK---N  435 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~~G---------------~~v~~~--gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~---~  435 (529)
                      .++..+|+..+.+.|++..               +.+..+  .....++.+.+..   ..+.+.++|++.||.+..   +
T Consensus       267 ~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~---~~~~~~~~l~~~~i~~~~~s~G  343 (403)
T 3cog_A          267 MEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKG---TLQHAEIFLKNLKLFTLAESLG  343 (403)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESS---CHHHHHHHHHHCSSSEECSCCS
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecC---CHHHHHHHHHhCCcceEccCCC
Confidence            6777788888888887641               111110  0013445555542   235677888888886532   1


Q ss_pred             C------CCCCCC------------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          436 S------VPGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       436 ~------~Pg~~~------------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      .      .|+...            ...++.|||++...+    ++++++.+.++|+++
T Consensus       344 ~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~----~~d~i~~l~~al~~~  398 (403)
T 3cog_A          344 GFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLED----EEDLLEDLDQALKAA  398 (403)
T ss_dssp             SSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSC----HHHHHHHHHHHHHHH
T ss_pred             CcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCC----HHHHHHHHHHHHHHh
Confidence            1      232110            122578999987533    366666666666543

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.86  E-value=1.2e-20  Score=200.37  Aligned_cols=328  Identities=17%  Similarity=0.203  Sum_probs=200.0

Q ss_pred             HHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC----C
Q 009673          116 RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK----P  191 (529)
Q Consensus       116 ~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~----p  191 (529)
                      ++|.+++...+....       ..|+..+...+++    +++++++|.+.     .+.+++|++|+..++.++++    |
T Consensus        55 ~~v~~a~~~~~~~~~-------~~y~~~~~~~~l~----~~la~~~~~~~-----v~~t~ggt~A~~~al~~~~~~~~~~  118 (467)
T 1ax4_A           55 NAMSDHQWAAMITGD-------EAYAGSRNYYDLK----DKAKELFNYDY-----IIPAHQGRGAENILFPVLLKYKQKE  118 (467)
T ss_dssp             CCEEHHHHHHHHTCC-------CCSSSCHHHHHHH----HHHHHHHCCCE-----EEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhhcc-------cccccCccHHHHH----HHHHHHcCCCc-----EEEcCCcHHHHHHHHHHHHHhhccC
Confidence            566666665543211       1133334455555    67788888742     24456678999999999988    9


Q ss_pred             CCE---EEEcCCCCCccccccccccccccccccceEEEEEcccC----C-----CCCCCCHHHHHHHhhhc---CCcEEE
Q 009673          192 HDR---IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD----E-----STGLVDYDMLEKTAILF---RPKLII  256 (529)
Q Consensus       192 GD~---Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~----~-----~~~~iD~d~le~~i~~~---~pklIi  256 (529)
                      ||+   |++. ..|.+..       ...+...|.  +++.++.+    .     .++.+|+++|++++++.   ++++|+
T Consensus       119 Gd~~~~viv~-~~~~~~~-------~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi  188 (467)
T 1ax4_A          119 GKAKNPVFIS-NFHFDTT-------AAHVELNGC--KAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIV  188 (467)
T ss_dssp             TCCSSCEEEE-SSCCHHH-------HHHHHHTTC--EEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEE
T ss_pred             CCccceEEEe-ccccchh-------hHHHhccCC--ceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEE
Confidence            998   8887 3331110       012233443  44433221    1     14578999999999853   588999


Q ss_pred             EcCCCCCC---C---CCHHHHHHHHHHhCCEEEEeccccc-ccc--------cccccCCCC-----CcccEEEecccccc
Q 009673          257 AGASAYPR---D---FDYPRMRQIADAVGALLMMDMAHIS-GLV--------AASVVADPF-----KYCDVVTTTTHKSL  316 (529)
Q Consensus       257 ~~~s~~p~---~---~d~~~i~~ia~~~g~~livD~ah~~-Gli--------~~~~~~~~~-----~~aDiv~~S~hK~l  316 (529)
                      +++++||+   .   .++++|+++|++||++||+|++|.. |..        ..+.....+     .++|++++|+||++
T Consensus       189 ~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~  268 (467)
T 1ax4_A          189 STVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDP  268 (467)
T ss_dssp             EESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTT
T ss_pred             EeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccC
Confidence            98777664   2   2478999999999999999998765 221        111100001     24789999999998


Q ss_pred             cCCCCeEEEeeCCCcchhHHHhhhcccc--cCC--CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673          317 RGPRGGMIFFKKDPVLGVELESAINNAV--FPG--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE  392 (529)
Q Consensus       317 ~GprgG~i~~~~~~~~~~~l~~~i~~~~--~p~--~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~  392 (529)
                      +.|-||+++.+++.    ++.+.+....  +.+  ..++.....+++++.+++....   .++.++..++++.+.+.|.+
T Consensus       269 g~~~Gg~~~~~d~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~  341 (467)
T 1ax4_A          269 LLNIGGLVAIRDNE----EIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE---EEYLHYRIGQVKYLGDRLRE  341 (467)
T ss_dssp             CCSSCEEEEESSCH----HHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcceEEEeCCHH----HHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHh
Confidence            55557888887310    1333322110  011  1234444455555556765432   23344555778889999988


Q ss_pred             cCcEEecCCCCCceEEEc-------cCCCCCcHHHHHHhH-hcCCeEEcC-CCC-----C--CCCCCCCCCeEEEccCCC
Q 009673          393 LGYKLVSGGSDNHLVLVD-------LRPMGIDGARVEKIL-DMASITLNK-NSV-----P--GDKSALVPGGIRIGSPAM  456 (529)
Q Consensus       393 ~G~~v~~~gt~~~~~~v~-------~~~~~i~~~~~~~~L-~~~GI~v~~-~~~-----P--g~~~~~~~~~iRig~~~~  456 (529)
                      .|++++.+ ...+++|++       +...+.+..++.+.| +++||.+.. +..     |  |...+...+.|||+++..
T Consensus       342 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~  420 (467)
T 1ax4_A          342 AGIPIQYP-TGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARR  420 (467)
T ss_dssp             TTCCBCSS-CCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTT
T ss_pred             CCCCcccC-CCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccc
Confidence            88877643 234667777       322234556677777 899999865 211     1  100011237899998743


Q ss_pred             ccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          457 TTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       457 tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      +   ++++|++++++.|.++++..
T Consensus       421 ~---~t~e~i~~~~~~l~~~~~~~  441 (467)
T 1ax4_A          421 V---YTNDHMDYIADALIGLKEKF  441 (467)
T ss_dssp             S---SCHHHHHHHHHHHHTTHHHH
T ss_pred             c---CCHHHHHHHHHHHHHHHHhh
Confidence            2   56899999999999988653

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=99.86  E-value=5e-21  Score=200.01  Aligned_cols=327  Identities=16%  Similarity=0.139  Sum_probs=199.2

Q ss_pred             cceeEecCC--C-----CCcHHHHHHHhhhhhcc-CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceee
Q 009673          103 KSLELIASE--N-----FTSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNV  172 (529)
Q Consensus       103 ~~i~L~ase--n-----~~~~~V~eal~~~l~~~-y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V  172 (529)
                      +.|+|..+.  +     ++++.|.+++...+.+. ...+|.      ......++++...+++...+|.  +++++ +.+
T Consensus        31 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~------~~~g~~~lr~~la~~~~~~~~~~~~~~~v-~~~  103 (412)
T 1ajs_A           31 RKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYL------PILGLAEFRTCASRLALGDDSPALQEKRV-GGV  103 (412)
T ss_dssp             TCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCC------CTTCCHHHHHHHHHHHHCTTCHHHHTTCE-EEE
T ss_pred             CceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCC------CCCCCHHHHHHHHHHHhcCCCCccCCCcE-EEE
Confidence            567887665  1     35689999998766221 112231      1122245553333333322222  33321 111


Q ss_pred             ecCChHHHHHHHH--HhhcCCC-----CEEEEcCCCCCccccccccccccccccccceEE-EEEcccCC-CCCCCCHHHH
Q 009673          173 QPLSGSPANFEVY--TAILKPH-----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE-SMPYRLDE-STGLVDYDML  243 (529)
Q Consensus       173 ~~~sGs~A~~~~l--~all~pG-----D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~-~v~~~v~~-~~~~iD~d~l  243 (529)
                      +..+|++|+..++  .++++||     |+|++++|.|.++..        .+...|.  + ++.+++++ +++.+|++++
T Consensus       104 ~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~d~~~l  173 (412)
T 1ajs_A          104 QSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNG--------VFTTAGF--KDIRSYRYWDTEKRGLDLQGF  173 (412)
T ss_dssp             EEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHH--------HHHHTTC--SCEEEEECEETTTTEECHHHH
T ss_pred             ECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHH--------HHHHcCC--ceeEEEeeecCCCCccCHHHH
Confidence            2344559999885  3557899     999999998765421        2334454  4 45555532 4578999999


Q ss_pred             HHHhhhc--CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccc--ccCCC---CC---cccEE
Q 009673          244 EKTAILF--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAAS--VVADP---FK---YCDVV  308 (529)
Q Consensus       244 e~~i~~~--~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~--~~~~~---~~---~aDiv  308 (529)
                      ++.+++.  ++++|+++.++||+  ..   ++++|.++|++||++||+|++|. ++...+  ....+   +.   ..+++
T Consensus       174 ~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~~~~i~  252 (412)
T 1ajs_A          174 LSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQ-GFASGNLEKDAWAIRYFVSEGFELFC  252 (412)
T ss_dssp             HHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT-TTTTSCHHHHTHHHHHHHHTTCCEEE
T ss_pred             HHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccc-cccCCcccccchHHHHHhccCCcEEE
Confidence            9998764  45677788888886  33   46789999999999999999843 433322  00001   11   12388


Q ss_pred             Eecccccc--cCCCCeEEEe---eCCCcchhH----HHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-----CchHHH
Q 009673          309 TTTTHKSL--RGPRGGMIFF---KKDPVLGVE----LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-----SPEFKV  374 (529)
Q Consensus       309 ~~S~hK~l--~GprgG~i~~---~~~~~~~~~----l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-----~~~~~~  374 (529)
                      +.|+||++  +|.|.|++++   ++      +    +.+.+........ ++++....+++..+|+...     ....++
T Consensus       253 ~~s~sK~~~~~G~riG~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~  325 (412)
T 1ajs_A          253 AQSFSKNFGLYNERVGNLTVVAKEP------DSILRVLSQMQKIVRVTW-SNPPAQGARIVARTLSDPELFHEWTGNVKT  325 (412)
T ss_dssp             EEECTTTSCCGGGCEEEEEEECSSH------HHHHHHHHHHHHHHHTTT-SSCCSHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred             EEecccccCCCCcceEEEEEecCCH------HHHHHHHHHHHHHHhccc-CCCChHHHHHHHHHHcCcchhHHHHHHHHH
Confidence            99999987  3677899998   54      4    3333333111112 2222233334444555321     123467


Q ss_pred             HHHHHHHHHHHHHHHHHhcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEE
Q 009673          375 YQNKVVSNCRALASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIR  450 (529)
Q Consensus       375 ~~~~i~~~a~~l~~~L~~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iR  450 (529)
                      ..+++.++++.+.+.|++.+    +.+..+. .+.+.|+++     +.+.+..+|+++||.+.    |         ++|
T Consensus       326 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~l~~~gv~v~----~---------~~R  386 (412)
T 1ajs_A          326 MADRILSMRSELRARLEALKTPGTWNHITDQ-IGMFSFTGL-----NPKQVEYLINQKHIYLL----P---------SGR  386 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCSSCCHHHHHC-CSSEEECCC-----CHHHHHHHHHTTCEECC----T---------TSE
T ss_pred             HHHHHHHHHHHHHHHHHhhCCCCCeeEEcCC-CceEEEeCC-----CHHHHHHHHHhCCEEec----C---------CcE
Confidence            78888899999999998865    6554432 234445443     35667788889999983    2         269


Q ss_pred             EccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          451 IGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       451 ig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      |++..     .++++++++++.|+++++
T Consensus       387 is~~~-----~~~~~i~~~~~~l~~~l~  409 (412)
T 1ajs_A          387 INMCG-----LTTKNLDYVATSIHEAVT  409 (412)
T ss_dssp             EEGGG-----CCTTTHHHHHHHHHHHHH
T ss_pred             EEeee-----CCHHHHHHHHHHHHHHHH
Confidence            98653     347999999999988875

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.86  E-value=1.3e-20  Score=197.88  Aligned_cols=289  Identities=13%  Similarity=0.061  Sum_probs=183.4

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..+++|    +++++++|.+.     .|.++||++|+..++.++++|||+|++.++.|++.+....    ..+...|
T Consensus        80 ~~p~~~~le----~~lA~l~g~~~-----~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~----~~l~~~G  146 (415)
T 2fq6_A           80 GTLTHFSLQ----QAMCELEGGAG-----CVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCS----KILSKLG  146 (415)
T ss_dssp             CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHH----HTGGGGT
T ss_pred             CCchHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHH----HHHHHcC
Confidence            456666666    67888999863     3556899999999999999999999999998876542110    0112234


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHH--hCCEEEEecccccccccccc
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASV  297 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~  297 (529)
                      .  ++..++.      .|+++|++++++ ++|+|++.+++||+  ..|+++|+++|++  +|+++++|++|..+..    
T Consensus       147 ~--~v~~v~~------~d~~~le~ai~~-~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~----  213 (415)
T 2fq6_A          147 V--TTSWFDP------LIGADIVKHLQP-NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVL----  213 (415)
T ss_dssp             C--EEEEECT------TCGGGGGGGCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTS----
T ss_pred             c--EEEEECC------CCHHHHHHhhcc-CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCccccc----
Confidence            3  5555543      278999999987 79999999888886  7899999999999  9999999999876532    


Q ss_pred             cCCCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhccccc-CCCCCCChHHHHHHHHHHHHHhcCchH
Q 009673          298 VADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEF  372 (529)
Q Consensus       298 ~~~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~~  372 (529)
                       ..|+. ++|++++|+||++.|+.   +|++++++      ++.+.+..... .+.  .......+.+..+++     .+
T Consensus       214 -~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~------~~~~~l~~~~~~~G~--~~~~~~a~~~~~~l~-----~l  279 (415)
T 2fq6_A          214 -FKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNA------RCWEQLRENAYLMGQ--MVDADTAYITSRGLR-----TL  279 (415)
T ss_dssp             -SCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECT------TTHHHHHHHHHHTTC--CCCHHHHHHHHHHHH-----HH
T ss_pred             -CCccccCCeEEEEeCccccCCCCCceEEEEEeCH------HHHHHHHHHHHhcCC--CCCHHHHHHHHhhhh-----HH
Confidence             12333 68999999999997654   69999887      34444432211 121  111111111112232     23


Q ss_pred             HHHHHHHHHHHHHHHHHHHhc-CcE-EecCC---------------CCCceEEEccCCCCCcHHHHHHhHhc---CCeEE
Q 009673          373 KVYQNKVVSNCRALASRLVEL-GYK-LVSGG---------------SDNHLVLVDLRPMGIDGARVEKILDM---ASITL  432 (529)
Q Consensus       373 ~~~~~~i~~~a~~l~~~L~~~-G~~-v~~~g---------------t~~~~~~v~~~~~~i~~~~~~~~L~~---~GI~v  432 (529)
                      ..+.++..+|++.+.+.|.+. ++. +..++               ....++.+.+.. +.+..+..++|+.   .+|.+
T Consensus       280 ~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g-~~~~~~~~~~l~~l~~~~~a~  358 (415)
T 2fq6_A          280 GVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKK-KLNNEELANYLDNFSLFSMAY  358 (415)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESS-CCCHHHHHHHHTTCSSCEECS
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC-CCCHHHHHHHHHhCCcCeEec
Confidence            456677888999999999874 333 21221               123445555542 1123344555544   44555


Q ss_pred             cCCCC--------CCCC--------CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          433 NKNSV--------PGDK--------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       433 ~~~~~--------Pg~~--------~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      +.+..        |+..        -....+.||||+...++    +++++.+.++|++
T Consensus       359 s~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~----~d~i~~l~~al~~  413 (415)
T 2fq6_A          359 SWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDV----DDLIADLDAGFAR  413 (415)
T ss_dssp             CCCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCH----HHHHHHHHHHHHT
T ss_pred             cCCCCceeEEecCCCccccccchhhcCCCCCEEEEEecCCCH----HHHHHHHHHHHHh
Confidence            43311        2110        01124689999875443    6777777777653

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=99.85  E-value=2e-20  Score=194.25  Aligned_cols=309  Identities=14%  Similarity=0.101  Sum_probs=196.2

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc--C
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--K  190 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--~  190 (529)
                      +.++.|++++...+.. +..+  . +.| ..+...+    .++++++++|++.++   .+..++|++|+..++.++.  .
T Consensus        61 ~~~~~v~~a~~~~~~~-~~~~--~-~~~-~~~~~~~----l~~~la~~~~~~~~~---v~~~~gg~~a~~~al~~~~~~~  128 (395)
T 1vef_A           61 HGNPEVVEAVKRQAET-LMAM--P-QTL-PTPMRGE----FYRTLTAILPPELNR---VFPVNSGTEANEAALKFARAHT  128 (395)
T ss_dssp             BTCHHHHHHHHHHHHH-CCCC--C-TTS-CCHHHHH----HHHHHHHTSCTTEEE---EEEESSHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHh-CCCC--c-ccc-CCHHHHH----HHHHHHHhcCCCcCE---EEEcCcHHHHHHHHHHHHHHHh
Confidence            4789999999888753 2211  1 122 2233333    447888889876542   2334566699999988764  6


Q ss_pred             CCCEEEEcCCCCCccccccccccccccccccce-----E-----EEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 009673          191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS  260 (529)
Q Consensus       191 pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-----~-----~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s  260 (529)
                      +||+|+++++.+.+....       .+...|..     +     +...++      ..|+++|++.+++ ++++|+++.+
T Consensus       129 ~~~~vi~~~~~y~~~~~~-------~~~~~g~~~~~~~~~p~~~~~~~~~------~~d~~~l~~~i~~-~~~~v~~~~~  194 (395)
T 1vef_A          129 GRKKFVAAMRGFSGRTMG-------SLSVTWEPKYREPFLPLVEPVEFIP------YNDVEALKRAVDE-ETAAVILEPV  194 (395)
T ss_dssp             SCCEEEEETTCCCCSSHH-------HHHTCCCHHHHGGGCSCSSCEEEEC------TTCHHHHHHHCCT-TEEEEEECSE
T ss_pred             CCCeEEEEcCCcCCCchh-------hhhhcCCcccccccCCCCCCeeEeC------CCcHHHHHHHhcc-CEEEEEEeCc
Confidence            899999998876433211       11122221     0     011111      2589999999986 7899988765


Q ss_pred             CCCC--CCC----HHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-cccEEEeccccccc-CCCCeEEEeeCC
Q 009673          261 AYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSLR-GPRGGMIFFKKD  329 (529)
Q Consensus       261 ~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~-~aDiv~~S~hK~l~-GprgG~i~~~~~  329 (529)
                      ++++  ..+    +++|.++|++||++||+|++|. |+...+. ..++   . ..|++  |+||++. |+|.|++++++ 
T Consensus       195 ~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~-~~~~~g~-~~~~~~~~~~~d~~--s~sK~~~~g~~~G~~~~~~-  269 (395)
T 1vef_A          195 QGEGGVRPATPEFLRAAREITQEKGALLILDEIQT-GMGRTGK-RFAFEHFGIVPDIL--TLAKALGGGVPLGVAVMRE-  269 (395)
T ss_dssp             ETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSS-SSTHHHHTCCCSEE--EECGGGGTTSSCEEEEEEH-
T ss_pred             cCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCCc-hhHhhhcCCCCCEE--EEcccccCCCceEEEEehH-
Confidence            5543  456    9999999999999999999987 5432221 1111   1 46877  6799985 46679999988 


Q ss_pred             CcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec-CCCCCceEE
Q 009673          330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS-GGSDNHLVL  408 (529)
Q Consensus       330 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~-~gt~~~~~~  408 (529)
                           ++.+.+......... +++....++...+++....   .++.+++.++++++.+.|++.+.+++. .....++++
T Consensus       270 -----~~~~~l~~~~~~~~~-~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~~~~  340 (395)
T 1vef_A          270 -----EVARSMPKGGHGTTF-GGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVG  340 (395)
T ss_dssp             -----HHHHTSCTTSSCCSS-TTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEE
T ss_pred             -----HHHhhhccCCcCCCc-CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhcCceEEEEEEEEEEE
Confidence                 677766542222222 2344444444556665432   345677888899999999886542111 001235667


Q ss_pred             EccCCCCCcHHHHHHhHh-cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          409 VDLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       409 v~~~~~~i~~~~~~~~L~-~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      +++..   +..++.+.|. ++||.+..    +     .++.+||+++..    .+++|++++++.|++++
T Consensus       341 ~~~~~---~~~~l~~~l~~~~gi~v~~----~-----~~~~iRi~~~~~----~~~~~i~~~~~~l~~~l  394 (395)
T 1vef_A          341 LELKE---KAAPYIARLEKEHRVLALQ----A-----GPTVIRFLPPLV----IEKEDLERVVEAVRAVL  394 (395)
T ss_dssp             EEESS---CSHHHHHHHHHHHCEECEE----S-----STTEEEECCCTT----CCHHHHHHHHHHHHHHH
T ss_pred             EEEcC---hHHHHHHHHHHHCCeEEec----C-----CCCEEEEeCCCC----CCHHHHHHHHHHHHHHh
Confidence            77653   2466777776 89999853    2     257899987643    45899999999998765

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.85  E-value=5.6e-20  Score=191.57  Aligned_cols=255  Identities=20%  Similarity=0.193  Sum_probs=168.2

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..++++    +++++++|.+.     .+.++||++|+..++.+++++||+|++.++.|++.+....    ......|
T Consensus        64 ~~~~~~~l~----~~la~~~g~~~-----~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~----~~~~~~g  130 (392)
T 3qhx_A           64 GNPTRTALE----AALAAVEDAAF-----GRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLID----KVFTGWN  130 (392)
T ss_dssp             CCHHHHHHH----HHHHHHTTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHH----HTGGGGT
T ss_pred             CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHH----HHHHhcC
Confidence            345455555    77889999873     3567899999999999999999999999998865432110    0112234


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  +++.++++      |++++++++++ ++++|++..++||+  ..|+++|+++|+++|+++|+|++|..+..     .
T Consensus       131 ~--~~~~v~~~------d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~-----~  196 (392)
T 3qhx_A          131 V--EYTPVALA------DLDAVRAAIRP-TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPAL-----Q  196 (392)
T ss_dssp             C--EEEEECTT------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTT-----C
T ss_pred             c--EEEEeCCC------CHHHHHHhhCC-CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence            3  66665542      89999999987 89999999888886  78999999999999999999999865422     1


Q ss_pred             CCCC-cccEEEecccccccCC---CCeEEEeeCCCcchhHHHhhhccccc-CCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKV  374 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~  374 (529)
                      .++. ++|+++.|+||++.|+   ++|+++.+++     ++.+.+..... .+...+ .....+    ++..+.  .+..
T Consensus       197 ~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~-----~~~~~l~~~~~~~g~~~~-~~~~~~----~~~~l~--~l~~  264 (392)
T 3qhx_A          197 QPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDE-----ELDQSFAFLQNGAGAVPG-PFDAYL----TMRGLK--TLVL  264 (392)
T ss_dssp             CGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCH-----HHHHHHHHHHHHHCCCCC-HHHHHH----HHHHHT--THHH
T ss_pred             ChHHhCCcEEEEcCccccCCCCCceEEEEEECcH-----HHHHHHHHHHHhcCCCCC-HHHHHH----HHhhhh--HHHH
Confidence            2333 6899999999999654   5899999853     56555543221 111122 121111    222221  2456


Q ss_pred             HHHHHHHHHHHHHHHHHhc-CcEEe-cCCC---------------CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCC
Q 009673          375 YQNKVVSNCRALASRLVEL-GYKLV-SGGS---------------DNHLVLVDLRPMGIDGARVEKILDMASITLNKN  435 (529)
Q Consensus       375 ~~~~i~~~a~~l~~~L~~~-G~~v~-~~gt---------------~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~  435 (529)
                      +.++..++++.+.+.|.+. ++..+ .++-               ...++.+.+.......+.+...|+..+|.++.+
T Consensus       265 ~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G  342 (392)
T 3qhx_A          265 RMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESLG  342 (392)
T ss_dssp             HHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSCCC
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCCCC
Confidence            6788889999999999873 44322 2211               123455566421123445666677677776544

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.85  E-value=5e-20  Score=193.32  Aligned_cols=289  Identities=18%  Similarity=0.170  Sum_probs=186.2

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..+++|    +++++++|.+.     .+.++||++|+..++.++++|||+|+++++.|++......    ......|
T Consensus        79 ~~p~~~~l~----~~la~~~g~~~-----~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~----~~~~~~g  145 (414)
T 3ndn_A           79 GNPTVSVFE----ERLRLIEGAPA-----AFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCS----EILPRWG  145 (414)
T ss_dssp             CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHH----THHHHTT
T ss_pred             CChHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHH----HHHHHcC
Confidence            345556666    77888999753     3567899999999999999999999999998866432110    0011244


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  +++.++.+      |+++|++++++ ++++|++++++||+  ..|+++|+++|+++|++||+|++|..+..     .
T Consensus       146 ~--~~~~v~~~------d~~~l~~ai~~-~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~-----~  211 (414)
T 3ndn_A          146 V--QTVFVDGD------DLSQWERALSV-PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLL-----Q  211 (414)
T ss_dssp             C--EEEEECTT------CHHHHHHHTSS-CCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHH-----C
T ss_pred             c--EEEEeCCC------CHHHHHHhcCC-CCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence            4  66665542      89999999987 89999999998887  78999999999999999999999876543     2


Q ss_pred             CCCC-cccEEEecccccccC---CCCeEEEeeCCCcchhHHHh-hhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRG---PRGGMIFFKKDPVLGVELES-AINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV  374 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~G---prgG~i~~~~~~~~~~~l~~-~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~  374 (529)
                      .++. ++|+++.|+||++.|   +++|++++++      +... .+..... ...++..  ..++ +.+++.+  ..+..
T Consensus       212 ~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~------~~~~~~l~~~~~-~~g~~~~--~~~a-~~~~~~l--~~l~~  279 (414)
T 3ndn_A          212 QGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDR------EYIDGPVQKLMR-HTGPAMS--AFNA-WVLLKGL--ETLAI  279 (414)
T ss_dssp             CCGGGTCSEEEEETTTTTTCSSCCCCEEEEECH------HHHTTHHHHHHH-HHCCCCC--HHHH-HHHHHHG--GGHHH
T ss_pred             CchhcCCCeEeccCCccccCCCCceEEEEEECH------HHHHHHHHHHHH-HcCCCCC--HHHH-HHHHHHH--HHHHH
Confidence            2333 689999999999965   5689999987      3333 3332110 0011111  1111 1223322  34566


Q ss_pred             HHHHHHHHHHHHHHHHHhc-CcEEe-cCCC---------------CCceEEEccCCC----CCcHHHHHHhHhcCCeEEc
Q 009673          375 YQNKVVSNCRALASRLVEL-GYKLV-SGGS---------------DNHLVLVDLRPM----GIDGARVEKILDMASITLN  433 (529)
Q Consensus       375 ~~~~i~~~a~~l~~~L~~~-G~~v~-~~gt---------------~~~~~~v~~~~~----~i~~~~~~~~L~~~GI~v~  433 (529)
                      +.++..+|++.+.+.|++. ++..+ .++-               ...++++.+...    ..+...+.+.|+..++.++
T Consensus       280 r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~s  359 (414)
T 3ndn_A          280 RVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNN  359 (414)
T ss_dssp             HHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCSSSEECSC
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhCccceEcCC
Confidence            7788899999999999873 44322 2221               123566666421    1123445556666666665


Q ss_pred             CCCC------CCCC------------CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          434 KNSV------PGDK------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       434 ~~~~------Pg~~------------~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      .+..      |...            ....++.|||++.        .|+.+.+.+.|.+++
T Consensus       360 ~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG--------~e~~~dli~dl~~al  413 (414)
T 3ndn_A          360 LGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVG--------LEDTDDLIADIDRAL  413 (414)
T ss_dssp             CSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECC--------SSCHHHHHHHHHHHH
T ss_pred             CCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeC--------cCCHHHHHHHHHHhh
Confidence            4321      1110            0123567999864        266777777776654

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.85  E-value=3.7e-20  Score=195.08  Aligned_cols=295  Identities=16%  Similarity=0.119  Sum_probs=184.8

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      +++..+++|    +++++++|.+.     .|.++||++|+..++.++++|||+|++.++.|++......    ..+...|
T Consensus        80 ~~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~----~~~~~~G  146 (430)
T 3ri6_A           80 SNPTVEDLE----QRLKNLTGALG-----VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQ----KTLPSFG  146 (430)
T ss_dssp             CCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHH----THHHHTT
T ss_pred             CCHHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHH----HHHHHcC
Confidence            456667776    77888999864     3566899999999999999999999999998876532110    0122345


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  +++.++.+      |+++|++++++ ++++|++.+++||+  ..|+++|+++|+++|++||+|++|..+..     .
T Consensus       147 ~--~~~~v~~~------d~~~l~~ai~~-~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~-----~  212 (430)
T 3ri6_A          147 I--EVRFVDVM------DSLAVEHACDE-TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYL-----L  212 (430)
T ss_dssp             C--EEEEECTT------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTT-----C
T ss_pred             C--EEEEeCCC------CHHHHHHhhCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence            4  66665542      89999999987 89999999888886  78999999999999999999999876643     2


Q ss_pred             CCCC-cccEEEecccccccCC---CCeEEEeeCCCcc-----hhH---------HHhhhcccccCCCCCCChHHHHHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVL-----GVE---------LESAINNAVFPGLQGGPHNHTIGGLA  361 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~~~-----~~~---------l~~~i~~~~~p~~~g~p~~~~iaala  361 (529)
                      .+.. ++|+++.|+||++.|+   .||+++.+.+..+     ..+         +..++...... ..|+......+.+ 
T Consensus       213 ~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~-~~g~~~~~~~a~l-  290 (430)
T 3ri6_A          213 EAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQ-NLGPSLSPHNAYL-  290 (430)
T ss_dssp             CGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHH-HHCCCCCHHHHHH-
T ss_pred             ChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHH-hcCCCCCHHHHHH-
Confidence            2333 6899999999999876   6788886543111     001         11111111000 0121111111211 


Q ss_pred             HHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEE-ecCCCC--------------Cc-eEEEccCCCCCcHHHHHHh
Q 009673          362 VCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKL-VSGGSD--------------NH-LVLVDLRPMGIDGARVEKI  424 (529)
Q Consensus       362 ~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v-~~~gt~--------------~~-~~~v~~~~~~i~~~~~~~~  424 (529)
                       +++.+  ..+..+.++..+|++.+.+.|++ +++.. ..++-.              .. ++++.+. ...+...+.+.
T Consensus       291 -~l~~l--~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~-~~~~~~~~~~~  366 (430)
T 3ri6_A          291 -QSLGL--ETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELE-SKEASYRFMDA  366 (430)
T ss_dssp             -HHHHH--HHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECS-SHHHHHHHHHH
T ss_pred             -HHhhh--hhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEEC-CHHHHHHHHHh
Confidence             22222  23456678888999999999987 46653 333311              12 6667765 11122334444


Q ss_pred             HhcCCeEEcCCCC------CCCC-----C-------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          425 LDMASITLNKNSV------PGDK-----S-------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       425 L~~~GI~v~~~~~------Pg~~-----~-------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      |+..++.++.+.+      |...     +       ...++.|||++.        .|+.+.+.+.|++++
T Consensus       367 l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG--------~E~~~dl~~dl~~al  429 (430)
T 3ri6_A          367 LKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVG--------IEEIEDLKEDILQAL  429 (430)
T ss_dssp             CSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECC--------SSCHHHHHHHHHHHH
T ss_pred             CCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHhh
Confidence            4445555543221      1000     0       123467999864        367777777777665

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=99.85  E-value=5.4e-21  Score=198.38  Aligned_cols=329  Identities=15%  Similarity=0.157  Sum_probs=196.2

Q ss_pred             cceeEecCC---C----CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC--CCCCCCceee-
Q 009673          103 KSLELIASE---N----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNV-  172 (529)
Q Consensus       103 ~~i~L~ase---n----~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g--~~~~~~~~~V-  172 (529)
                      +.|+|..++   +    ++++.+.+++...+.+....+|..      .....++++...+++....+  +++++  +.+ 
T Consensus        27 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr~~la~~~~~~~~~~~~~~~--v~~~   98 (396)
T 2q7w_A           27 GKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLG------IDGIPEFGRCTQELLFGKGSALINDKR--ARTA   98 (396)
T ss_dssp             -CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCC------TTCCHHHHHHHHHHHHCTTCHHHHTTC--EEEE
T ss_pred             CceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCC------CCCCHHHHHHHHHHHhcCCCCcccccc--EEEE
Confidence            467887665   1    456999999987664322223321      11123455333333322212  12332  211 


Q ss_pred             ecCChHHHHHHHHHhh--cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhh
Q 009673          173 QPLSGSPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAIL  249 (529)
Q Consensus       173 ~~~sGs~A~~~~l~al--l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~  249 (529)
                      +..+|++|+..++.++  +.|||+|++++|.|.++..        .+...|.  +++.+++++ +++.+|++++++.+++
T Consensus        99 ~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~  168 (396)
T 2q7w_A           99 QTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKS--------VFNSAGL--EVREYAYYDAENHTLDFDALINSLNE  168 (396)
T ss_dssp             EESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHH--------HHHHTTC--EEEEEECEETTTTEECHHHHHHHHTT
T ss_pred             ecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHH--------HHHHcCC--ceEEEecccCCCCCcCHHHHHHHHHh
Confidence            2445559999888665  4799999999998765421        2334454  555666532 3578999999999975


Q ss_pred             c--CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccc--cc-C-CCCC---cccEEEeccccc
Q 009673          250 F--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAAS--VV-A-DPFK---YCDVVTTTTHKS  315 (529)
Q Consensus       250 ~--~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~--~~-~-~~~~---~aDiv~~S~hK~  315 (529)
                      .  ++++++++.++||+  ..   ++++|.++|+++|+++|+|++|. ++...+  .. + ..+.   ..+++++|+||+
T Consensus       169 ~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~  247 (396)
T 2q7w_A          169 AQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQ-GFARGLEEDAEGLRAFAAMHKELIVASSYSXN  247 (396)
T ss_dssp             CCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT-TSSSCHHHHTHHHHHHHHHCSCEEEEEECTTT
T ss_pred             CCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccc-cccCCccchhHHHHHHHhcCCcEEEEEecccc
Confidence            3  35677788888887  33   46789999999999999999964 333221  00 0 0011   134788999999


Q ss_pred             c--cCCCCeEEEe--eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh-----cCchHHHHHHHHHHHHHHH
Q 009673          316 L--RGPRGGMIFF--KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA-----QSPEFKVYQNKVVSNCRAL  386 (529)
Q Consensus       316 l--~GprgG~i~~--~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~-----~~~~~~~~~~~i~~~a~~l  386 (529)
                      +  +|+|.|++++  +++. ...++.+.+........ ++++....+++..+++..     .....++..+++.++++.+
T Consensus       248 ~~~~G~riG~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l  325 (396)
T 2q7w_A          248 FGLYNERVGACTLVAADSE-TVDRAFSQMKAAIRANY-SNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLF  325 (396)
T ss_dssp             TTCGGGCCEEEEEECSSHH-HHHHHHHHHHHHHHTTT-SSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHH
T ss_pred             ccccccccceEEEEcCCHH-HHHHHHHHHHHHHhhcc-CCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            7  5788899987  2210 00023333332111222 232333333333344321     0123456677788889999


Q ss_pred             HHHHHhcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCC
Q 009673          387 ASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS  462 (529)
Q Consensus       387 ~~~L~~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~  462 (529)
                      .+.|++.|    +.+..+. .+.+.|+++     +.+.+...|+++||.+.    |         ++||++...     +
T Consensus       326 ~~~L~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~l~~~gv~v~----~---------~~Ris~~~~-----~  381 (396)
T 2q7w_A          326 VNTLQEKGANRDFSFIIKQ-NGMFSFSGL-----TKEQVLRLREEFGVYAV----A---------SGRVNVAGM-----T  381 (396)
T ss_dssp             HHHHHHTTCCSCCTHHHHC-CSSEEECCC-----CHHHHHHHHHHHCEECC----T---------TCEEEGGGC-----C
T ss_pred             HHHHHhcCCCCCcceecCC-CceEEEecC-----CHHHHHHHHHhcCeeec----C---------CceEEEeec-----C
Confidence            99998876    6554432 234445444     34667888889999983    2         369987532     4


Q ss_pred             HHHHHHHHHHHHHH
Q 009673          463 EKEFVAIADFIHEG  476 (529)
Q Consensus       463 ~~d~~~la~~i~~~  476 (529)
                      ++|++++++.|+++
T Consensus       382 ~e~i~~~~~~l~~~  395 (396)
T 2q7w_A          382 PDNMAPLCEAIVAV  395 (396)
T ss_dssp             TTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc
Confidence            79999999998765

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=99.84  E-value=3.6e-19  Score=188.22  Aligned_cols=322  Identities=15%  Similarity=0.092  Sum_probs=200.1

Q ss_pred             ceeEecCCC--C---CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673          104 SLELIASEN--F---TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS  178 (529)
Q Consensus       104 ~i~L~asen--~---~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs  178 (529)
                      .|++..+.+  .   .+|.|.+|+...+.. +..  .. +.| ..+...+++    +++++++|.+.     .+..+||+
T Consensus        78 ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~-~~~--~~-~~~-~~~~~~~l~----~~la~~~g~~~-----v~~~~sGs  143 (439)
T 2oat_A           78 YFDFLSSYSAVNQGHCHPKIVNALKSQVDK-LTL--TS-RAF-YNNVLGEYE----EYITKLFNYHK-----VLPMNTGV  143 (439)
T ss_dssp             EEESSGGGGTTTTCBTCHHHHHHHHHHHTT-CSC--CC-TTS-EESSHHHHH----HHHHHHHTCSE-----EEEESSHH
T ss_pred             EEEccCCcccccCCCCCHHHHHHHHHHHHh-cCc--cc-Ccc-CCHHHHHHH----HHHHHhcCCCE-----EEEeCCHH
Confidence            466655432  2   679999999887743 221  11 112 123344444    66777887532     24457788


Q ss_pred             HHHHHHHHhhc---------CCC-CEEEEcCCCCCccccccccccccccccccc----------eEEEEEcccCCCCCCC
Q 009673          179 PANFEVYTAIL---------KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI----------YFESMPYRLDESTGLV  238 (529)
Q Consensus       179 ~A~~~~l~all---------~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~----------~~~~v~~~v~~~~~~i  238 (529)
                      +|+..++.++.         .|| |+|++.++.+.+....       .+...+.          ...++.++.      .
T Consensus       144 eA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~-------~~~~~g~~~~~~~~~p~~~~v~~~~~------~  210 (439)
T 2oat_A          144 EAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLS-------AISSSTDPTSYDGFGPFMPGFDIIPY------N  210 (439)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHH-------HHTTCCCHHHHTTSCSCCTTEEEECS------S
T ss_pred             HHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHh-------HhhcCCChhcccCCCCCCCCeEEeCC------C
Confidence            99999888764         467 9999998876443211       1111110          012223322      3


Q ss_pred             CHHHHHHHhhhcCCcEEEEcCCCCC-C-CC----CHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEE
Q 009673          239 DYDMLEKTAILFRPKLIIAGASAYP-R-DF----DYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVT  309 (529)
Q Consensus       239 D~d~le~~i~~~~pklIi~~~s~~p-~-~~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~  309 (529)
                      |+++|++.++..++++|+++..+++ + ..    ++++|+++|++||++||+|++| .|+...+.. . ..+. ..|++ 
T Consensus       211 d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~-~g~g~~g~~~~~~~~~~~~Di~-  288 (439)
T 2oat_A          211 DLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQ-TGLARTGRWLAVDYENVRPDIV-  288 (439)
T ss_dssp             CHHHHHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTT-TTTTTTSSSSGGGGGTCCCSEE-
T ss_pred             CHHHHHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCcchhHHHhCCCCcEE-
Confidence            8999999995336788888744332 2 33    7999999999999999999998 554322211 0 0111 36876 


Q ss_pred             ecccccccC--CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 009673          310 TTTHKSLRG--PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA  387 (529)
Q Consensus       310 ~S~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~  387 (529)
                       |++|+++|  .++|++++++      ++.+.+.........+++. ...++..++++.+..+   ++.+++.++++++.
T Consensus       289 -t~sK~l~~G~~~~G~v~~~~------~~~~~l~~~~~~~t~~~~~-~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~  357 (439)
T 2oat_A          289 -LLGKALSGGLYPVSAVLCDD------DIMLTIKPGEHGSTYGGNP-LGCRVAIAALEVLEEE---NLAENADKLGIILR  357 (439)
T ss_dssp             -EECGGGGTTSSCCEEEEECH------HHHTTSCTTSSCCSSTTCH-HHHHHHHHHHHHHHHT---THHHHHHHHHHHHH
T ss_pred             -EecccccCCCCCeEEEEECH------HHHhccCCCCcccCCCcCH-HHHHHHHHHHHHHhhh---hHHHHHHHHHHHHH
Confidence             67799854  5899999987      6777665432223333333 3344444467655322   45677888899999


Q ss_pred             HHHHhcCcEEecC-CCCCceEEEccCCC-CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHH
Q 009673          388 SRLVELGYKLVSG-GSDNHLVLVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKE  465 (529)
Q Consensus       388 ~~L~~~G~~v~~~-gt~~~~~~v~~~~~-~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d  465 (529)
                      +.|++.+++++.. .....++++++... +.+..++.+.|.+.||.+..    +     .++.+||+.+..    ++++|
T Consensus       358 ~~L~~l~~~~~~~~~~~g~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~~----~-----~~~~iRi~~~~~----~t~e~  424 (439)
T 2oat_A          358 NELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKP----T-----HGDIIRFAPPLV----IKEDE  424 (439)
T ss_dssp             HHHTTSCTTTEEEEEEETTEEEEEECCCSSCCHHHHHHHHHHTTEECCB----S-----SSSEEEECCCTT----CCHHH
T ss_pred             HHHHHhcCCCcEEEEeeeeEEEEEEecCccHHHHHHHHHHHHCCeEEec----C-----CCCEEEEECccC----CCHHH
Confidence            9998765543210 01234566666432 13466788888788999853    1     257899986643    56899


Q ss_pred             HHHHHHHHHHHHH
Q 009673          466 FVAIADFIHEGVE  478 (529)
Q Consensus       466 ~~~la~~i~~~~~  478 (529)
                      ++++++.|++++.
T Consensus       425 i~~~l~~l~~~l~  437 (439)
T 2oat_A          425 LRESIEIINKTIL  437 (439)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988764

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=99.84  E-value=2.8e-19  Score=186.10  Aligned_cols=319  Identities=17%  Similarity=0.104  Sum_probs=199.5

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK---  190 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~---  190 (529)
                      .+|.|.+++...+...+.   .+.. + ..+...++    ++++++++|.+.     .+..++|++|+..++.+++.   
T Consensus        56 ~~p~v~~a~~~~~~~~~~---~~~~-~-~~~~~~~l----~~~la~~~~~~~-----v~~~~gg~~a~~~al~~~~~~~~  121 (406)
T 4adb_A           56 AHPELREALNEQASKFWH---TGNG-Y-TNEPVLRL----AKKLIDATFADR-----VFFCNSGAEANEAALKLARKFAH  121 (406)
T ss_dssp             TCHHHHHHHHHHHTTCSC---CCTT-S-CCHHHHHH----HHHHHHHSSCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhccc---ccCC-c-CCHHHHHH----HHHHHhhCCCCe-----EEEeCcHHHHHHHHHHHHHHHHH
Confidence            488999999887754221   1111 2 22333333    478889998762     24456777999999988865   


Q ss_pred             ----CC-CEEEEcCCCCCccccccccccccccc---cccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673          191 ----PH-DRIMGLDLPHGGHLSHGFMTPKRRVS---GTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY  262 (529)
Q Consensus       191 ----pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~---~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~  262 (529)
                          +| |+|++.++.+.+..............   +.....+...++      ..|+++|++++++ ++++|+++ |+|
T Consensus       122 ~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~-~~~~v~~~-p~n  193 (406)
T 4adb_A          122 DRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAA------YNDINSASALIDD-STCAVIVE-PIQ  193 (406)
T ss_dssp             HHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEEC------TTCHHHHHTTCST-TEEEEEEC-SEE
T ss_pred             hcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeC------CCcHHHHHHHhcC-CeEEEEEe-CCc
Confidence                66 99999998875542111000000000   000000112222      2489999999986 89999998 777


Q ss_pred             CC--C-----CCHHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEecccccc-cCCCCeEEEeeCCCc
Q 009673          263 PR--D-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPV  331 (529)
Q Consensus       263 p~--~-----~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l-~GprgG~i~~~~~~~  331 (529)
                      |+  .     .++++|.++|++||++||+|++|. |+...+...  .... ..|+++  +||++ +|.|+|++++++   
T Consensus       194 p~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~t--~sK~~~~G~r~G~~~~~~---  267 (406)
T 4adb_A          194 GEGGVVPASNAFLQGLRELCNRHNALLIFDEVQT-GVGRTGELYAYMHYGVTPDLLT--TAKALGGGFPVGALLATE---  267 (406)
T ss_dssp             TTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEE--ECGGGGTTSCCEEEEECH---
T ss_pred             CCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhHHHHhcCCCCCEEE--echhhcCCCCeEEEEEcH---
Confidence            74  2     268999999999999999999975 543322110  0011 357774  58998 566889999987   


Q ss_pred             chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC--cEEecC-CCCCceEE
Q 009673          332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLVSG-GSDNHLVL  408 (529)
Q Consensus       332 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G--~~v~~~-gt~~~~~~  408 (529)
                         ++.+.+.........+. +....++...+++.+..   +++.+++.++++.+.+.|++.+  +.++.. .....+++
T Consensus       268 ---~~~~~~~~~~~~~~~~~-~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~  340 (406)
T 4adb_A          268 ---ECARVMTVGTHGTTYGG-NPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIG  340 (406)
T ss_dssp             ---HHHHTCCTTSSCCSSTT-CHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEE
T ss_pred             ---HHHhhhccCCcCCCCCC-CHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEE
Confidence               78777765433333333 33444444456776543   5677888888999999887742  111111 01234555


Q ss_pred             EccCCC-CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          409 VDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       409 v~~~~~-~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      +.+... ..+..++.+.|.+.||.+..    +     .++.+||+.+..    .+++|++++++.|++++...
T Consensus       341 ~~~~~~~~~~~~~~~~~l~~~gi~v~~----~-----~~~~iRi~~~~~----~~~e~i~~~~~~l~~~l~~~  400 (406)
T 4adb_A          341 CVLNADYAGQAKQISQEAAKAGVMVLI----A-----GGNVVRFAPALN----VSEEEVTTGLDRFAAACEHF  400 (406)
T ss_dssp             EEECTTTTTCHHHHHHHHHHTTEECEE----S-----STTEEEECCCTT----CCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCcHHHHHHHHHHHHHCCcEEee----c-----CCCeEEEECCCC----CCHHHHHHHHHHHHHHHHHH
Confidence            655431 12467788888888999853    2     257899976543    46899999999999988643

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=99.84  E-value=4e-19  Score=187.46  Aligned_cols=312  Identities=13%  Similarity=0.092  Sum_probs=190.4

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----  189 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all----  189 (529)
                      .+|.|.+|+...+.. +.  +.. +.| ..+...+++    +++++++|.+.     .+..+||++|+..++.++.    
T Consensus        82 ~~p~v~~ai~~~~~~-~~--~~~-~~~-~~~~~~~l~----~~la~~~g~~~-----v~~~~sGseA~~~al~~a~~~~~  147 (433)
T 1z7d_A           82 CHPNILNAMINQAKN-LT--ICS-RAF-FSVPLGICE----RYLTNLLGYDK-----VLMMNTGAEANETAYKLCRKWGY  147 (433)
T ss_dssp             TCHHHHHHHHHHHTT-CS--CCC-TTS-EEHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHh-CC--Ccc-CCc-CCHHHHHHH----HHHHhhcCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence            679999999887743 22  111 112 223333333    67788888542     2445778899999888753    


Q ss_pred             -----CCC-CEEEEcCCCCCccccccccccccccccccc-----e-----EEEEEcccCCCCCCCCHHHHHHHhhhcCCc
Q 009673          190 -----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----Y-----FESMPYRLDESTGLVDYDMLEKTAILFRPK  253 (529)
Q Consensus       190 -----~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~-----~-----~~~v~~~v~~~~~~iD~d~le~~i~~~~pk  253 (529)
                           +|| |+|+++++.+.+....       .+...+.     .     ..++.++      ..|+++|+++++..+++
T Consensus       148 ~~~g~~~gr~~vi~~~~~yhg~~~~-------~~~~~g~~~~~~~~~p~~~~v~~~~------~~d~~~le~~l~~~~~~  214 (433)
T 1z7d_A          148 EVKKIPENMAKIVVCKNNFSGRTLG-------CISASTTKKCTSNFGPFAPQFSKVP------YDDLEALEEELKDPNVC  214 (433)
T ss_dssp             HTSCCCTTCCEEEEETTC---------------------------------CEEEEC------TTCHHHHHHHHTSTTEE
T ss_pred             hccCCCCCCCeEEEEeCCcCCcchh-------hhcccCCccccccCCCCCCCeEEeC------CCCHHHHHHHhCCCCEE
Confidence                 578 9999999876443211       1112221     0     0122222      23899999999433788


Q ss_pred             EEEEcCCCCC-C-CC----CHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEeccccccc-C-CCCe
Q 009673          254 LIIAGASAYP-R-DF----DYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR-G-PRGG  322 (529)
Q Consensus       254 lIi~~~s~~p-~-~~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~-G-prgG  322 (529)
                      +|+++..+++ + ..    ++++|+++|++||++||+|++|. |+...+.. . ..+. ..|++  |++|+++ | .|+|
T Consensus       215 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~g~~g~~~~~~~~~~~~di~--t~sK~l~~G~~~~G  291 (433)
T 1z7d_A          215 AFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQT-GLGRTGKLLCVHHYNVKPDVI--LLGKALSGGHYPIS  291 (433)
T ss_dssp             EEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEE--EECGGGGTTSSCCE
T ss_pred             EEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCcc-CCCcCCcchhhHhcCCCCCEE--EECccccCCCCCeE
Confidence            8888744332 2 23    79999999999999999999974 54322211 0 1111 36777  5679985 4 5899


Q ss_pred             EEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEec-
Q 009673          323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS-  399 (529)
Q Consensus       323 ~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~-  399 (529)
                      ++++++      ++.+.+......+..++ +....++..++++.+...   ++.+++.++++++.+.|++.  +++++. 
T Consensus       292 ~v~~~~------~~~~~l~~~~~~~t~~~-~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~  361 (433)
T 1z7d_A          292 AVLAND------DIMLVIKPGEHGSTYGG-NPLAASICVEALNVLINE---KLCENAEKLGGPFLENLKRELKDSKIVRD  361 (433)
T ss_dssp             EEEECH------HHHTTCCTTCCCCTTTT-CHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred             EEEECH------HHHhhhccccccccCCC-CHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence            999987      67776654322222333 333344444466655322   45677788888898888774  553221 


Q ss_pred             -CCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          400 -GGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       400 -~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                       .+ ...++++++.....+...+.+.|.+.||.+..    +     ..+.+||+.+..    .+++|++++++.|++++.
T Consensus       362 ~~~-~g~~~~i~~~~~~~~~~~~~~~l~~~Gv~v~~----~-----~~~~iRi~~~~~----~t~e~i~~~l~~l~~~l~  427 (433)
T 1z7d_A          362 VRG-KGLLCAIEFKNELVNVLDICLKLKENGLITRD----V-----HDKTIRLTPPLC----ITKEQLDECTEIIVKTVK  427 (433)
T ss_dssp             EEE-ETTEEEEEECTTTCCHHHHHHHHHHTTEECCE----E-----TTTEEEECCCTT----CCHHHHHHHHHHHHHHHH
T ss_pred             EEe-eeeEEEEEEccChhHHHHHHHHHHHCCeEEec----C-----CCCEEEEECCcC----CCHHHHHHHHHHHHHHHH
Confidence             11 23456666653213466787888789999843    2     247899986643    468999999999998875


Q ss_pred             H
Q 009673          479 I  479 (529)
Q Consensus       479 ~  479 (529)
                      .
T Consensus       428 ~  428 (433)
T 1z7d_A          428 F  428 (433)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.84  E-value=5.3e-20  Score=195.54  Aligned_cols=327  Identities=17%  Similarity=0.173  Sum_probs=195.0

Q ss_pred             HHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCC----
Q 009673          116 RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP----  191 (529)
Q Consensus       116 ~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~p----  191 (529)
                      ++|++++...+...    .   ..|+..+...+++    +++++++|.+.     .+.+++|++|+..++.++++|    
T Consensus        53 ~~v~~a~~~~l~~~----~---~~y~~~~~~~~l~----~~la~~~~~~~-----v~~t~~gt~A~~~al~~~~~~~~~~  116 (467)
T 2oqx_A           53 GAVTQSMQAAMMRG----D---EAYSGSRSYYALA----ESVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKKREQE  116 (467)
T ss_dssp             SCCCHHHHHHTTSC----C---CCSSSCHHHHHHH----HHHHHHHCCSE-----EEEEC--CCSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccC----c---ceeccCchhHHHH----HHHHHHhCcCc-----EEEcCCcHHHHHHHHHHHhcccccc
Confidence            77888877665321    1   1244445455555    67888888742     244567779999999999888    


Q ss_pred             -C----CEEEEcCCCCCccccccccccccccccccceEEEEE------cccC---CCCCCCCHHHHHHHhhh---cCCcE
Q 009673          192 -H----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP------YRLD---ESTGLVDYDMLEKTAIL---FRPKL  254 (529)
Q Consensus       192 -G----D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~------~~v~---~~~~~iD~d~le~~i~~---~~pkl  254 (529)
                       |    |+|+.. ..|+..+..       .....+.  ..+.      ++.+   +.++.+|+++|++++++   .++++
T Consensus       117 ~G~~~~d~Ii~~-~~h~~t~~~-------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~  186 (467)
T 2oqx_A          117 KGLDRSKMVAFS-NYFFDTTQG-------HSQINGC--TVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPY  186 (467)
T ss_dssp             HCCCTTTCEEEE-SSCCHHHHH-------HHHHTTC--EEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCC
T ss_pred             CCCCccceEEec-ccccccchh-------hhhccCc--ceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeE
Confidence             9    997765 444221000       0011111  1111      1111   13467899999999985   26899


Q ss_pred             EEEcCCCCCC---CC---CHHHHHHHHHHhCCEEEEeccccc-ccc--------cccccCCCC-----CcccEEEecccc
Q 009673          255 IIAGASAYPR---DF---DYPRMRQIADAVGALLMMDMAHIS-GLV--------AASVVADPF-----KYCDVVTTTTHK  314 (529)
Q Consensus       255 Ii~~~s~~p~---~~---d~~~i~~ia~~~g~~livD~ah~~-Gli--------~~~~~~~~~-----~~aDiv~~S~hK  314 (529)
                      |++++++|++   ..   ++++|+++|++||++||+|++|.. +..        ..+.....+     .++|++++|+||
T Consensus       187 vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK  266 (467)
T 2oqx_A          187 IVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKK  266 (467)
T ss_dssp             EEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSS
T ss_pred             EEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEeccc
Confidence            9998877763   32   478999999999999999988766 321        122111011     247888999999


Q ss_pred             cccCCCCeEEEeeCC-CcchhHHHhhhcccc--cCC--CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Q 009673          315 SLRGPRGGMIFFKKD-PVLGVELESAINNAV--FPG--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR  389 (529)
Q Consensus       315 ~l~GprgG~i~~~~~-~~~~~~l~~~i~~~~--~p~--~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~  389 (529)
                      +++.|.||+++++++ ..   ++..++....  ..+  ..++.....++++..+++....   ++..++..++++.+.+.
T Consensus       267 ~~g~~~Gg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~---~~~~~~~~~~~~~l~~~  340 (467)
T 2oqx_A          267 DAMVPMGGLLCMKDDSFF---DVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN---LDWLAYRIAQVQYLVDG  340 (467)
T ss_dssp             TTCCSSCEEEEECSGGGH---HHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCceEEEecChhHH---HHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhh---HHHHHHHHHHHHHHHHH
Confidence            996666889888762 10   1222222211  111  1233333344444444443222   23445567788999999


Q ss_pred             HHhcCcEEecCCCCCceEEEccCC--CCCc-----HHHHHHhH-hcCCeEEcCCCC------C--CCCCCCCCCeEEEcc
Q 009673          390 LVELGYKLVSGGSDNHLVLVDLRP--MGID-----GARVEKIL-DMASITLNKNSV------P--GDKSALVPGGIRIGS  453 (529)
Q Consensus       390 L~~~G~~v~~~gt~~~~~~v~~~~--~~i~-----~~~~~~~L-~~~GI~v~~~~~------P--g~~~~~~~~~iRig~  453 (529)
                      |++.|+++. + ...+++++++..  .+++     ...+.+.| .++||.+.....      |  |...+...+.|||++
T Consensus       341 L~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~  418 (467)
T 2oqx_A          341 LEEIGVVCQ-Q-AGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTI  418 (467)
T ss_dssp             HHHTTCCEE-E-ECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECC
T ss_pred             HHHCCCeee-c-CCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEe
Confidence            988788766 3 234667777631  1223     33446666 889999864210      1  100111237899997


Q ss_pred             CCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          454 PAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       454 ~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +...   ++++|++++++.|++++..
T Consensus       419 ~~~~---~t~e~i~~~~~~l~~~l~~  441 (467)
T 2oqx_A          419 PRAT---YTQTHMDFIIEAFKHVKEN  441 (467)
T ss_dssp             CTTT---SCHHHHHHHHHHHHHHHHS
T ss_pred             cCCC---CCHHHHHHHHHHHHHHHhh
Confidence            6430   4589999999999998864

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.84  E-value=5.5e-19  Score=183.24  Aligned_cols=282  Identities=17%  Similarity=0.131  Sum_probs=183.5

Q ss_pred             HHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC
Q 009673          154 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE  233 (529)
Q Consensus       154 ~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~  233 (529)
                      ++.+++++|.+ +    .|.+++|++|+..++.+++++||+|++.++.|.+.+...    .......|.  +++.++.  
T Consensus        58 ~~~la~~~~~~-~----~i~~~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~----~~~~~~~g~--~~~~~~~--  124 (386)
T 1cs1_A           58 QRALAELEGGA-G----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLF----DSLAKRGCY--RVLFVDQ--  124 (386)
T ss_dssp             HHHHHHHHTCS-E----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHH----HHHHTTTSC--EEEEECT--
T ss_pred             HHHHHHHhCCC-c----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHH----HHHHHhcCC--EEEEeCC--
Confidence            37788899887 2    455699999999999999999999999999886543110    000122343  5555543  


Q ss_pred             CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEe
Q 009673          234 STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTT  310 (529)
Q Consensus       234 ~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~  310 (529)
                          .|++++++.+++ ++++|+++.++||+  ..|+++|.++|+++|+++|+|++|..+...     .++. ++|++++
T Consensus       125 ----~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~-----~~~~~~~di~~~  194 (386)
T 1cs1_A          125 ----GDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQ-----NPLALGADLVLH  194 (386)
T ss_dssp             ----TCHHHHHHHHHT-CCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTC-----CGGGGTCSEEEE
T ss_pred             ----CCHHHHHHhhcc-CCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC-----CccccCceEEEE
Confidence                289999999987 89999999888875  779999999999999999999998765432     1222 5799999


Q ss_pred             cccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 009673          311 TTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA  387 (529)
Q Consensus       311 S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~  387 (529)
                      |+||++.||.   +|+++++++     ++.+.+....... .++.+....++...+++     .+....++..++++.+.
T Consensus       195 s~sK~~~~~~~~~~G~~~~~~~-----~l~~~l~~~~~~~-~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~  263 (386)
T 1cs1_A          195 SCTKYLNGHSDVVAGVVIAKDP-----DVVTELAWWANNI-GVTGGAFDSYLLLRGLR-----TLVPRMELAQRNAQAIV  263 (386)
T ss_dssp             ETTTTTTCSSCCCCEEEEESSH-----HHHHHHHHHHHHH-TCBCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHH
T ss_pred             cCcccccCCCCceeEEEEeCcH-----HHHHHHHHHHHhc-CCCCCHHHHHHHHhccc-----HHHHHHHHHHHHHHHHH
Confidence            9999986654   399999863     4655554332221 12222222222112222     23556677888888898


Q ss_pred             HHHHhcC-cEEe-cCC---------------CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCC---------CC--
Q 009673          388 SRLVELG-YKLV-SGG---------------SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSV---------PG--  439 (529)
Q Consensus       388 ~~L~~~G-~~v~-~~g---------------t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~---------Pg--  439 (529)
                      +.|++.+ +.-+ .++               ....++.+.+..   ..+.+.+.|++.||.+.....         |.  
T Consensus       264 ~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~~  340 (386)
T 1cs1_A          264 KYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG---DEQTLRRFLGGLSLFTLAESLGGVESLISHAATM  340 (386)
T ss_dssp             HHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS---CHHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGT
T ss_pred             HHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC---CHHHHHHHHHhCCcceEcccCCCcceeeeccccc
Confidence            8887742 2211 111               113444555532   256788889999998863110         10  


Q ss_pred             C--C-C-------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          440 D--K-S-------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       440 ~--~-~-------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      .  . +       ...++.|||+++..    .++++++.+.++|+++
T Consensus       341 ~~~~~~~~~~~~~g~~~~~iRis~~~~----~~~~~i~~l~~al~~~  383 (386)
T 1cs1_A          341 THAGMAPEARAAAGISETLLRISTGIE----DGEDLIADLENGFRAA  383 (386)
T ss_dssp             TTTTSCHHHHHHHTCCTTEEEEECCSS----CHHHHHHHHHHHHHHH
T ss_pred             ccccCCHHHHHhcCCCCCeEEEEEccC----CHHHHHHHHHHHHHHh
Confidence            0  0 0       01257899998753    3467777777777654

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=99.84  E-value=1.3e-18  Score=182.83  Aligned_cols=334  Identities=14%  Similarity=0.039  Sum_probs=200.4

Q ss_pred             ceeEecCC--CC---CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673          104 SLELIASE--NF---TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS  178 (529)
Q Consensus       104 ~i~L~ase--n~---~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs  178 (529)
                      .+++.++.  ++   .++.|++++...+.....  ++..+| . .+...+    .++.++++++.+.++   .+..++|+
T Consensus        45 ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~--~~~~~~-~-~~~~~~----l~~~la~~~~~~~~~---v~~~~ggt  113 (429)
T 1s0a_A           45 LVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSH--VMFGGI-T-HAPAIE----LCRKLVAMTPQPLEC---VFLADSGS  113 (429)
T ss_dssp             EEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSC--CCCSSE-E-CHHHHH----HHHHHHHHSCTTCCE---EEEESSHH
T ss_pred             EEEcCccHhhccCCCCCHHHHHHHHHHHHhccc--cccccc-C-CHHHHH----HHHHHHHhCCCCCCE---EEEeCCHH
Confidence            35555544  22   589999999888754321  111111 1 122222    236788899876642   23345566


Q ss_pred             HHHHHHHHhhc---C----CCCEEEEcCCCCCccccccccc------cccccccccceEEEEEcccCC--CC-CCCCHHH
Q 009673          179 PANFEVYTAIL---K----PHDRIMGLDLPHGGHLSHGFMT------PKRRVSGTSIYFESMPYRLDE--ST-GLVDYDM  242 (529)
Q Consensus       179 ~A~~~~l~all---~----pGD~Vl~~~~~~~g~~s~g~~~------~~~~i~~~g~~~~~v~~~v~~--~~-~~iD~d~  242 (529)
                      +|+..++.++.   +    |||+|+++++.+.+........      +.............++++...  +. +.+|+++
T Consensus       114 ea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  193 (429)
T 1s0a_A          114 VAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVG  193 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHH
T ss_pred             HHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHH
Confidence            99998887653   2    7999999998764421100000      000000000112444443210  12 3589999


Q ss_pred             HHHHhhh--cCCcEEEEcCC-CCCC--CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEe
Q 009673          243 LEKTAIL--FRPKLIIAGAS-AYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTT  310 (529)
Q Consensus       243 le~~i~~--~~pklIi~~~s-~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~  310 (529)
                      |++++++  .++++|+++.. ++++  ..+    +++|+++|++||++||+|++|. |+...+.. . ..+. ..|+++ 
T Consensus       194 l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~g~~g~~~~~~~~~~~~d~~t-  271 (429)
T 1s0a_A          194 FARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIAT-GFGRTGKLFACEHAEIAPDILC-  271 (429)
T ss_dssp             HHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEE-
T ss_pred             HHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-CCcccchHHHhhhcCCCCCEEE-
Confidence            9999874  25667777755 5654  455    9999999999999999999975 32211110 0 0011 357774 


Q ss_pred             cccccccC--CCCeEEEeeCCCcchhHHHhhhcccc-----cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673          311 TTHKSLRG--PRGGMIFFKKDPVLGVELESAINNAV-----FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC  383 (529)
Q Consensus       311 S~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~~-----~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a  383 (529)
                       ++|+|+|  .|.|++++++      ++.+.+....     ..+..+ .+...+++..++++.+...   ++.+++.+++
T Consensus       272 -~sK~l~~G~~~iG~~~~~~------~~~~~l~~~~~~~~~~~~t~~-~n~~~~~a~~aal~~~~~~---~~~~~~~~~~  340 (429)
T 1s0a_A          272 -LGKALTGGTMTLSATLTTR------EVAETISNGEAGCFMHGPTFM-GNPLACAAANASLAILESG---DWQQQVADIE  340 (429)
T ss_dssp             -ECGGGGTSSSCCEEEEECH------HHHHHHHTSTTSSCSCCCTTT-TCHHHHHHHHHHHHHHHTC---HHHHHHHHHH
T ss_pred             -ecccccCCCccceEEEeCH------HHHHHhhcCCCcccccCCCCC-CCHHHHHHHHHHHHHHHhC---CHHHHHHHHH
Confidence             5699865  6779999987      6666665421     112222 2444555555677765443   4567777888


Q ss_pred             HHHHHHHHhc----CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccC
Q 009673          384 RALASRLVEL----GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTR  459 (529)
Q Consensus       384 ~~l~~~L~~~----G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~  459 (529)
                      +++.+.|++.    ++..+.+  ...++++++.. ..+...+.+.|.++||.+..    +      .+.+||+.+..   
T Consensus       341 ~~l~~~L~~l~~~~~~~~~~~--~g~~~~~~~~~-~~~~~~l~~~l~~~Gi~v~~----~------~~~iRis~~~~---  404 (429)
T 1s0a_A          341 VQLREQLAPARDAEMVADVRV--LGAIGVVETTH-PVNMAALQKFFVEQGVWIRP----F------GKLIYLMPPYI---  404 (429)
T ss_dssp             HHHHHHHGGGGGCTTEEEEEE--ETTEEEEEESS-CBCHHHHHHHHHHTTEECCC----B------TTEEEECCCTT---
T ss_pred             HHHHHHHHHHhcCCCEEEEEE--eeEEEEEEECC-cccHHHHHHHHHHCCCEEec----c------CCEEEEECCCC---
Confidence            8999998773    3332222  23456777643 34567777888789999843    1      36899997654   


Q ss_pred             CCCHHHHHHHHHHHHHHHH
Q 009673          460 GFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       460 g~~~~d~~~la~~i~~~~~  478 (529)
                       .+++|++++++.|++++.
T Consensus       405 -~t~e~i~~~~~~l~~~~~  422 (429)
T 1s0a_A          405 -ILPQQLQRLTAAVNRAVQ  422 (429)
T ss_dssp             -CCHHHHHHHHHHHHHHTS
T ss_pred             -CCHHHHHHHHHHHHHHHH
Confidence             358999999999988754

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=99.83  E-value=2.9e-19  Score=187.71  Aligned_cols=311  Identities=15%  Similarity=0.127  Sum_probs=195.1

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK---  190 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~---  190 (529)
                      .+|.|.+++...+.. +..  .... | ..+...++    ++++++++|.+.     .+..++|++|+..++.++..   
T Consensus        74 ~~p~v~~ai~~~~~~-~~~--~~~~-~-~~~~~~~l----~~~la~~~g~~~-----v~~~~ggteA~~~al~~~~~~~~  139 (420)
T 2pb2_A           74 CHPALVEALKSQGET-LWH--TSNV-F-TNEPALRL----GRKLIDATFAER-----VLFMNSGTEANETAFKLARHYAC  139 (420)
T ss_dssp             TCHHHHHHHHHHHTT-CCC--CCTT-S-CCHHHHHH----HHHHHHHSSCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHh-ccc--ccCc-c-CCHHHHHH----HHHHHhhCCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence            579999999887743 322  1111 2 22333333    477888888532     24456778999999988765   


Q ss_pred             ----CCC-EEEEcCCCCCccccccccccccccccccce-----E-----EEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673          191 ----PHD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILFRPKLI  255 (529)
Q Consensus       191 ----pGD-~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-----~-----~~v~~~v~~~~~~iD~d~le~~i~~~~pklI  255 (529)
                          ||+ +|+++++.+.+....       .+...|..     +     .+..++      ..|+++|++++++ ++++|
T Consensus       140 ~~~~~g~~~vi~~~~~yh~~~~~-------~~~~~g~~~~~~~~~p~~~~~~~~~------~~d~~~le~~i~~-~~~~v  205 (420)
T 2pb2_A          140 VRHSPFKTKIIAFHNAFHGRSLF-------TVSVGGQPKYSDGFGPKPADIIHVP------FNDLHAVKAVMDD-HTCAV  205 (420)
T ss_dssp             HHTCTTCCEEEEETTCCCCSSHH-------HHHHSSCHHHHTTSSSCCSCEEEEC------TTCHHHHHHHCCT-TEEEE
T ss_pred             hccCCCCCEEEEEeCCcCCcCHH-------HHHhcCCccccccCCCCCCCeEEec------CCCHHHHHHHhcc-CceEE
Confidence                784 999998876443211       01111210     0     122222      1389999999986 89999


Q ss_pred             EEcCCCCCC-C-----CCHHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEeccccccc-CCCCeEEE
Q 009673          256 IAGASAYPR-D-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGMIF  325 (529)
Q Consensus       256 i~~~s~~p~-~-----~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l~-GprgG~i~  325 (529)
                      +++.+++++ .     .++++|+++|++||++||+|++| .|+...+...  ..+. ..|++  |++|+++ |.|.|+++
T Consensus       206 i~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~-~g~~~~g~~~~~~~~~~~~dii--t~sK~l~~G~~iG~~~  282 (420)
T 2pb2_A          206 VVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQ-CGMGRTGDLFAYMHYGVTPDIL--TSAKALGGGFPVSAML  282 (420)
T ss_dssp             EECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTT-TTTTTTSSSSHHHHHTCCCSEE--EECGGGGTTSCCEEEE
T ss_pred             EEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCC-cCcccCCcHHHHHhcCCCCCeE--EecccccCCCceEEEE
Confidence            988665543 2     36899999999999999999997 5654333110  0011 36877  4679984 56789999


Q ss_pred             eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEec--CC
Q 009673          326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS--GG  401 (529)
Q Consensus       326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~--~g  401 (529)
                      +++      ++.+.+.........++ +....++...+|+.+..   +++.+++.++++++.+.|++.  +++.+.  .+
T Consensus       283 ~~~------~l~~~l~~~~~~~t~~~-~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~  352 (420)
T 2pb2_A          283 TTQ------EIASAFHVGSHGSTYGG-NPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRG  352 (420)
T ss_dssp             ECH------HHHTTCC----CCEECC-CHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             EhH------HHHHhhcCCCcCcccCc-CHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            987      67666654222222233 33344444456776543   456778888889999888763  333211  11


Q ss_pred             CCCceEEEccCCC-CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          402 SDNHLVLVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       402 t~~~~~~v~~~~~-~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                       ...++++++... +.+..++.+.|.++||.+..    +     .++.+||+.+..    .+++|++++++.|+++++.
T Consensus       353 -~g~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~~----~-----~~~~iRl~~~~~----~t~eei~~~~~~l~~~l~~  417 (420)
T 2pb2_A          353 -MGLLIGAELKPKYKGRARDFLYAGAEAGVMVLN----A-----GADVMRFAPSLV----VEEADIHEGMQRFAQAVGK  417 (420)
T ss_dssp             -ETTEEEEEECGGGTTCHHHHHHHHHHTTEECEE----S-----STTEEEECCCTT----CCHHHHHHHHHHHHHHHHH
T ss_pred             -cceEEEEEECCCchHHHHHHHHHHHHCCCEEEe----C-----CCCEEEEECCCC----CCHHHHHHHHHHHHHHHHH
Confidence             234566666421 12456777888789999853    2     156899997643    4689999999999988763

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=99.83  E-value=1.4e-19  Score=188.19  Aligned_cols=307  Identities=15%  Similarity=0.119  Sum_probs=195.8

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK---  190 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~---  190 (529)
                      .++.|++++...+.. +..+  . +.| ..+...+++    +++++++|.+.     .+..++|++|+..++.++..   
T Consensus        57 ~~~~v~~a~~~~~~~-~~~~--~-~~~-~~~~~~~l~----~~la~~~g~~~-----v~~~~gg~~a~~~al~~~~~~~~  122 (397)
T 2ord_A           57 SHPRLVEAIKDQAEK-LIHC--S-NLF-WNRPQMELA----ELLSKNTFGGK-----VFFANTGTEANEAAIKIARKYGK  122 (397)
T ss_dssp             TCHHHHHHHHHHHHH-CSCC--C-TTS-EEHHHHHHH----HHHHHTTTSCE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHh-cccC--c-ccc-CCHHHHHHH----HHHHHhcCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence            479999999887753 2221  1 112 223334444    77888888432     24456777999999888763   


Q ss_pred             ---C-CCEEEEcCCCCCccccccccccccccccccce-----E-----EEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673          191 ---P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILFRPKLII  256 (529)
Q Consensus       191 ---p-GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-----~-----~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi  256 (529)
                         | +|+|+++++.+.+....       .+...|..     +     .++.++.      .|+++|++.+++ ++++|+
T Consensus       123 ~~~~~~~~vi~~~~~yh~~~~~-------~~~~~g~~~~~~~~~p~~~~~~~~~~------~d~~~l~~~l~~-~~~~v~  188 (397)
T 2ord_A          123 KKSEKKYRILSAHNSFHGRTLG-------SLTATGQPKYQKPFEPLVPGFEYFEF------NNVEDLRRKMSE-DVCAVF  188 (397)
T ss_dssp             HHCTTCCEEEEEBTCCCCSSHH-------HHHHSBCHHHHGGGCSCCTTEEEECT------TCHHHHHHHCCT-TEEEEE
T ss_pred             cCCCCCceEEEEcCCcCCCchh-------hhhccCChhhccccCCCCCCeeEecC------CCHHHHHHHhhc-CeEEEE
Confidence               5 47899888776433210       11122221     0     0233332      389999999986 899999


Q ss_pred             EcCCCCCC-C-----CCHHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-cccEEEeccccccc-CCCCeEEE
Q 009673          257 AGASAYPR-D-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSLR-GPRGGMIF  325 (529)
Q Consensus       257 ~~~s~~p~-~-----~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~-~aDiv~~S~hK~l~-GprgG~i~  325 (529)
                      +++++||+ .     .++++|.++|++||++||+|++|. |+...+. ..++   . ..|++  |++|++. |+|.|+++
T Consensus       189 ~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~-~~~~~~~~~~~d~~--s~sK~~~~G~r~G~~~  264 (397)
T 2ord_A          189 LEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQC-GMGRTGK-LFAYQKYGVVPDVL--TTAKGLGGGVPIGAVI  264 (397)
T ss_dssp             ECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSS-SSHHHHHTCCCSEE--EECGGGGTTSCCEEEE
T ss_pred             EecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCcc-chhhhhhCCCCCee--eeccccCCCcCeEEEE
Confidence            99888875 3     478999999999999999999975 6543331 1111   1 36876  5579985 56789999


Q ss_pred             eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEec--CC
Q 009673          326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS--GG  401 (529)
Q Consensus       326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~--~g  401 (529)
                      +++      ++. .+.........+. +....+++..+|+....   ++..+++.++++.+.+.|++.  +++++.  .+
T Consensus       265 ~~~------~~~-~l~~~~~~~~~~~-~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~  333 (397)
T 2ord_A          265 VNE------RAN-VLEPGDHGTTFGG-NPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRG  333 (397)
T ss_dssp             ECS------TTC-CCCTTSSCCSSTT-CHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred             Ech------Hhc-ccCCCCcCCCCCC-CHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEE
Confidence            988      444 4432211122222 34444555557776543   356677888889999988774  343211  11


Q ss_pred             CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          402 SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       402 t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                       ...++++++.. ..+..++.+.|.++||.+..    +     .++.+||+.+..    .+++|++++++.|++++.
T Consensus       334 -~g~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~----~-----~~~~iRis~~~~----~~~e~i~~~~~~l~~~l~  395 (397)
T 2ord_A          334 -MGLMIGIQFRE-EVSNREVATKCFENKLLVVP----A-----GNNTIRFLPPLT----VEYGEIDLAVETLKKVLQ  395 (397)
T ss_dssp             -ETTEEEEEECT-TSCHHHHHHHHHHTTEECEE----E-----TTTEEEECCCTT----CCHHHHHHHHHHHHHHHH
T ss_pred             -EeEEEEEEECC-hHHHHHHHHHHHHCCCEEcc----C-----CCCEEEEECCcC----CCHHHHHHHHHHHHHHHh
Confidence             23456666643 23567788888789999853    2     257899997543    468999999999988764

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=99.83  E-value=2.4e-20  Score=193.56  Aligned_cols=319  Identities=15%  Similarity=0.160  Sum_probs=194.7

Q ss_pred             cceeEecCC----C---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc-CC--CCCCCceee
Q 009673          103 KSLELIASE----N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF-NL--DENKWGVNV  172 (529)
Q Consensus       103 ~~i~L~ase----n---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~-g~--~~~~~~~~V  172 (529)
                      +.|+|..++    +   ++++.|.+++...+.+....+|+.      .....++++    .+++++ +.  +++    +|
T Consensus        27 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr~----~la~~~~~~~~~~~----~v   92 (394)
T 2ay1_A           27 GKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAG------LSGEPEFQK----AMGELILGDGLKSE----TT   92 (394)
T ss_dssp             TCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCC------SSCCHHHHH----HHHHHHHGGGCCGG----GE
T ss_pred             cccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCC------CCCcHHHHH----HHHHHHhCCCCCcc----cE
Confidence            467887765    2   347999999987764322223322      111234553    344443 43  443    23


Q ss_pred             e---cCChHHHHHHHHHhhc--CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHH
Q 009673          173 Q---PLSGSPANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKT  246 (529)
Q Consensus       173 ~---~~sGs~A~~~~l~all--~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~  246 (529)
                      .   +.+|++|+..++.++.  .|||+|++++|.|.++..        .+...|.  +++.+++++ +++.+|++++++.
T Consensus        93 ~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~  162 (394)
T 2ay1_A           93 ATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVS--------IMNFMGL--PVQTYRYFDAETRGVDFEGMKAD  162 (394)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHH--------HHHHHTC--CEEEEECEETTTTEECHHHHHHH
T ss_pred             EEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHH--------HHHHcCC--ceEEEecccccCCccCHHHHHHH
Confidence            3   4455699998887764  499999999987755421        2233454  455555532 3578999999999


Q ss_pred             hhhc--CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccc---ccC-CCCC--cc-cEEEecc
Q 009673          247 AILF--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAAS---VVA-DPFK--YC-DVVTTTT  312 (529)
Q Consensus       247 i~~~--~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~---~~~-~~~~--~a-Div~~S~  312 (529)
                      +++.  +++++++++++||+  ..   ++++|.++|+++|+++|+|++|.. +...+   ..+ ..+.  +. .++++|+
T Consensus       163 l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~  241 (394)
T 2ay1_A          163 LAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQG-FGDGLEEDAAGTRLIASRIPEVLIAASC  241 (394)
T ss_dssp             HHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTT-SSSCHHHHHHHHHHHHHHCSSEEEEEEC
T ss_pred             HHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccc-cccCcccchHHHHHHhhcCCCEEEEEec
Confidence            9763  24667778888886  44   467889999999999999999653 22211   000 0011  22 3778999


Q ss_pred             cccc--cCCCCeEEEe--eCCCcchhHHH----hhhcccccCCCCCCChHHHHHHHHHHHHHh-----cCchHHHHHHHH
Q 009673          313 HKSL--RGPRGGMIFF--KKDPVLGVELE----SAINNAVFPGLQGGPHNHTIGGLAVCLKHA-----QSPEFKVYQNKV  379 (529)
Q Consensus       313 hK~l--~GprgG~i~~--~~~~~~~~~l~----~~i~~~~~p~~~g~p~~~~iaala~al~~~-----~~~~~~~~~~~i  379 (529)
                      ||++  +|.|.|++++  +++     ++.    +.+.........+.+.. ..+++..+++..     .....++..+++
T Consensus       242 sK~~~~~G~riG~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~-~~~a~~~~l~~~~l~~~~~~~~~~~~~~~  315 (394)
T 2ay1_A          242 SKNFGIYRERTGCLLALCADA-----ATRELAQGAMAFLNRQTYSFPPFH-GAKIVSTVLTTPELRADWMAELEAVRSGM  315 (394)
T ss_dssp             TTTTTCGGGCEEEEEEECSSH-----HHHHHHHHHHHHHHHTTTSSCCCH-HHHHHHHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCcCcCCccceEEEEeCCH-----HHHHHHHHHHHHHHhhhcCCCChH-HHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence            9997  5778899998  221     332    22221111222222233 333333345421     012346777888


Q ss_pred             HHHHHHHHHHHHhcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCC
Q 009673          380 VSNCRALASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPA  455 (529)
Q Consensus       380 ~~~a~~l~~~L~~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~  455 (529)
                      .++++.+.+.|++.|    +.+..+. ...+.|+++     +.+.+.+.|+++||.+.    |         ++||++..
T Consensus       316 ~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~~~~~~-----~~~~~~~~l~~~gi~v~----~---------~~Ris~~~  376 (394)
T 2ay1_A          316 LRLREQLAGELRDLSGSDRFGFVAEH-RGMFSRLGA-----TPEQVKRIKEEFGIYMV----G---------DSRINIAG  376 (394)
T ss_dssp             HHHHHHHHHHHHHHHTSSTTTHHHHC-CSSEEECCC-----CHHHHHHHHHHHCEECC----T---------TCEEEGGG
T ss_pred             HHHHHHHHHHHHhcCCCCCeeEEcCC-ceEEEeeCC-----CHHHHHHHHHhCCEEec----C---------CCeEEeec
Confidence            888999999998754    6654432 234455544     34567888889999983    2         36998652


Q ss_pred             CccCCCCHHHHHHHHHHHHHH
Q 009673          456 MTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       456 ~tt~g~~~~d~~~la~~i~~~  476 (529)
                           .+++|++++++.|+++
T Consensus       377 -----~~~~~i~~~~~~l~~~  392 (394)
T 2ay1_A          377 -----LNDNTIPILARAIIEV  392 (394)
T ss_dssp             -----CCTTTHHHHHHHHHHH
T ss_pred             -----CCHhhHHHHHHHHHHc
Confidence                 3579999999988764

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.83  E-value=1.1e-19  Score=193.35  Aligned_cols=322  Identities=17%  Similarity=0.143  Sum_probs=195.5

Q ss_pred             cceeEecC-C--CCCcHHHHHHHhhhhh---ccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC
Q 009673          103 KSLELIAS-E--NFTSRAVMEAVGSCLT---NKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS  176 (529)
Q Consensus       103 ~~i~L~as-e--n~~~~~V~eal~~~l~---~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s  176 (529)
                      +.|.+..+ +  ..+++.|.+++.....   ..-..+|.    ..|++..++    +++++++++|.+.     .+.+++
T Consensus        90 ~~i~l~~g~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~----~~g~~~~~~----l~~~la~~~g~~~-----~i~~~s  156 (464)
T 1ibj_A           90 LLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYT----RSGNPTRDA----LESLLAKLDKADR-----AFCFTS  156 (464)
T ss_dssp             HHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBT----TTCCHHHHH----HHHHHHHHHTCSE-----EEEESS
T ss_pred             eEEECCCCCCCCCCCCccHHhhhhhhhhcccccCCcccc----CCCCHHHHH----HHHHHHHHhCCCe-----EEEECC
Confidence            34666543 3  3467777777653210   00011121    124444444    3478899999762     355688


Q ss_pred             hHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673          177 GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII  256 (529)
Q Consensus       177 Gs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi  256 (529)
                      |++|+..++. +++|||+|+++++.|++.....    ...+...|.  +++.++++      |+++|++.+++ ++++|+
T Consensus       157 Gt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~----~~~~~~~G~--~v~~v~~~------d~~~l~~~i~~-~tk~v~  222 (464)
T 1ibj_A          157 GMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLL----SQVVPRSGV--VVKRVNTT------KLDEVAAAIGP-QTKLVW  222 (464)
T ss_dssp             HHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHH----HHTSGGGTC--EEEEECTT------SHHHHHHHCCS-SEEEEE
T ss_pred             HHHHHHHHHH-HhCCCCEEEEECCCchhHHHHH----HHHHHHcCC--EEEEeCCC------CHHHHHHHhcc-CceEEE
Confidence            9999887764 8899999999999876542100    001223454  56665542      89999999987 899999


Q ss_pred             EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccccCC---CCeEEEeeCCC
Q 009673          257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDP  330 (529)
Q Consensus       257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~  330 (529)
                      +++++||+  ..|+++|+++|++||++||+|++|+.|...     .++. ++|++++|+||++.||   ++|+++++++ 
T Consensus       223 l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~-----~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~-  296 (464)
T 1ibj_A          223 LESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-  296 (464)
T ss_dssp             ECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTC-----CGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSH-
T ss_pred             EeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccC-----ChhhcCCEEEEECCcccccCCCCCcEEEEEEChH-
Confidence            99998886  779999999999999999999998766431     2222 5899999999999765   6699999863 


Q ss_pred             cchhHHHhhhccccc-CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc---------------C
Q 009673          331 VLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL---------------G  394 (529)
Q Consensus       331 ~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~---------------G  394 (529)
                          ++.+.+..... .+ .+.....+.+++ .+++     ....+.++...++..+.+.|++.               |
T Consensus       297 ----~l~~~l~~~~~~~g-~~~~~~~~~a~~-~al~-----~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~  365 (464)
T 1ibj_A          297 ----KLAKEVYFLQNSEG-SGLAPFDCWLCL-RGIK-----TMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPG  365 (464)
T ss_dssp             ----HHHHHHHHHHHHTT-CBCCHHHHHHHH-HHHT-----THHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTT
T ss_pred             ----HHHHHHHHHHHhcC-CCCCHHHHHHHH-hchh-----hHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcc
Confidence                56665543221 11 111122222222 2332     12233444555666666777653               2


Q ss_pred             cEEecCCC--CCceEEEccCCCCCc-HHHHHHhHhcCCeEEcCCC------CCCCC------------CCCCCCeEEEcc
Q 009673          395 YKLVSGGS--DNHLVLVDLRPMGID-GARVEKILDMASITLNKNS------VPGDK------------SALVPGGIRIGS  453 (529)
Q Consensus       395 ~~v~~~gt--~~~~~~v~~~~~~i~-~~~~~~~L~~~GI~v~~~~------~Pg~~------------~~~~~~~iRig~  453 (529)
                      +.+..+..  ...++++++.  +.+ ...+.+.|...||.++.+.      .|+..            ....++.|||++
T Consensus       366 ~~~~~~~~~g~g~~~~~~l~--~~~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsv  443 (464)
T 1ibj_A          366 HHLHFSQAKGAGSVFSFITG--SVALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISA  443 (464)
T ss_dssp             HHHHTTTCSCCCSEEEEECS--CHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEEC
T ss_pred             hHHHhccCCCCceEEEEEEC--CHHHHHHHHHhcCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEe
Confidence            22222111  1345666663  222 2346666777888876543      12110            012256799986


Q ss_pred             CCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          454 PAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       454 ~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ..        +|++++.+.|++++.
T Consensus       444 g~--------edi~~li~~L~~al~  460 (464)
T 1ibj_A          444 GI--------EDVDDLISDLDIAFK  460 (464)
T ss_dssp             CS--------SCHHHHHHHHHHHHH
T ss_pred             CC--------CCHHHHHHHHHHHHh
Confidence            52        789999999988765

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=99.83  E-value=6.5e-19  Score=184.60  Aligned_cols=322  Identities=15%  Similarity=0.038  Sum_probs=194.7

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeee-cCChHHHHHHHHH---hh
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQ-PLSGSPANFEVYT---AI  188 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~-~~sGs~A~~~~l~---al  188 (529)
                      +.++.|++++...+.. +..  .... |...+...++    ++.++++++.+..+   +|. .++|++|+..++.   ++
T Consensus        57 ~~~~~v~~a~~~~~~~-~~~--~~~~-~~~~~~~~~l----~~~la~~~~~~~~~---~v~~~~g~~~a~~~~~~~a~~~  125 (426)
T 1sff_A           57 HLHPKVVAAVEAQLKK-LSH--TCFQ-VLAYEPYLEL----CEIMNQKVPGDFAK---KTLLVTTGSEAVENAVKIARAA  125 (426)
T ss_dssp             BTCHHHHHHHHHHTTT-CSC--CCTT-TEECHHHHHH----HHHHHHHSSCSSCE---EEEEESSHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHh-CCC--cccc-ccCCHHHHHH----HHHHHHhCCccccc---EEEEeCchHHHHHHHHHHHHHh
Confidence            3689999999887743 221  1111 2222333333    46788888322211   333 4455599999887   67


Q ss_pred             cCCCCEEEEcCCCCCccccccccccccccccccc-------------eEEEEEcccCC--CCCCCCHHHHHHHhhh----
Q 009673          189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDE--STGLVDYDMLEKTAIL----  249 (529)
Q Consensus       189 l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~-------------~~~~v~~~v~~--~~~~iD~d~le~~i~~----  249 (529)
                      .++| +|++.+|.|.+.....       +...|.             .+..++++.+.  .++.+|+++|++.++.    
T Consensus       126 ~~~~-~vi~~~p~y~~~~~~~-------~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~  197 (426)
T 1sff_A          126 TKRS-GTIAFSGAYHGRTHYT-------LALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAP  197 (426)
T ss_dssp             HTCC-EEEEETTCCCCSSHHH-------HHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCG
T ss_pred             hCCC-eEEEECCCcCCCchHh-------hhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCC
Confidence            7887 8888888775432110       111111             12333433210  1235799999999873    


Q ss_pred             cCCcEEEEcC-CCCCC-CCC----HHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEeccccccc-CC
Q 009673          250 FRPKLIIAGA-SAYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GP  319 (529)
Q Consensus       250 ~~pklIi~~~-s~~p~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l~-Gp  319 (529)
                      .++++|+++. ++|.+ ..+    +++|.++|++||++||+|++|. |+...+...  .... ..|++  |+||++. |.
T Consensus       198 ~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~di~--s~sK~~~~Gl  274 (426)
T 1sff_A          198 EDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQS-GAGRTGTLFAMEQMGVAPDLT--TFAKSIAGGF  274 (426)
T ss_dssp             GGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTSCCSEE--EECGGGGTSS
T ss_pred             CceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcccchhhhhhcCCCCCEE--EEcccccCCC
Confidence            3678888853 34444 666    9999999999999999999976 654322110  0111 35666  6779984 56


Q ss_pred             CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC--cE-
Q 009673          320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YK-  396 (529)
Q Consensus       320 rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G--~~-  396 (529)
                      |.|++++++      ++.+.+.........+. +....+++..+++.+...   ++.+++.++++.+.+.|.+.+  ++ 
T Consensus       275 riG~~~~~~------~~~~~l~~~~~~~~~~~-~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~  344 (426)
T 1sff_A          275 PLAGVTGRA------EVMDAVAPGGLGGTYAG-NPIACVAALEVLKVFEQE---NLLQKANDLGQKLKDGLLAIAEKHPE  344 (426)
T ss_dssp             CCEEEEEEH------HHHTTSCTTSBCCSSSS-CHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred             ceEEEEEcH------HHHhhhccCCcCcCCCC-CHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            679999998      67776654222222233 334444555567655322   356677788888888887632  22 


Q ss_pred             --EecCCCCCceEEEccCC-------CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673          397 --LVSGGSDNHLVLVDLRP-------MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV  467 (529)
Q Consensus       397 --v~~~gt~~~~~~v~~~~-------~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~  467 (529)
                        .+.+  ...++++++..       .+.+..++.+.|.+.||.+..    |..   .++++||+++..    .+++|++
T Consensus       345 ~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~----~~~---~~~~iRi~~~~~----~~~~~i~  411 (426)
T 1sff_A          345 IGDVRG--LGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLS----CGP---YYNVLRILVPLT----IEDAQIR  411 (426)
T ss_dssp             EEEEEE--ETTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEE----EST---TSCEEEECCCTT----CCHHHHH
T ss_pred             eEEEEE--EEEEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEec----CCC---CCCEEEEECCcc----CCHHHHH
Confidence              1222  24567777642       123355677778788999854    321   257899987633    4589999


Q ss_pred             HHHHHHHHHHHH
Q 009673          468 AIADFIHEGVEI  479 (529)
Q Consensus       468 ~la~~i~~~~~~  479 (529)
                      ++++.|++++..
T Consensus       412 ~~~~~l~~~l~~  423 (426)
T 1sff_A          412 QGLEIISQCFDE  423 (426)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999988753

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.83  E-value=1.3e-19  Score=188.75  Aligned_cols=283  Identities=13%  Similarity=0.110  Sum_probs=177.4

Q ss_pred             HHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC
Q 009673          154 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE  233 (529)
Q Consensus       154 ~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~  233 (529)
                      ++.+++++|.+.     .|.++||++|+..++. +++|||+|++.++.|++.+...    ...+...|.  +++.++++ 
T Consensus        61 r~~la~~~g~~~-----~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~----~~~~~~~G~--~v~~v~~~-  127 (393)
T 1n8p_A           61 ERAVAALENAQY-----GLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYF----TKVANAHGV--ETSFTNDL-  127 (393)
T ss_dssp             HHHHHHHTTCSE-----EEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHH----HHTSTTTCS--CCEEESSH-
T ss_pred             HHHHHHHhCCCc-----EEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHH----HHHHHHcCc--EEEEeCCC-
Confidence            378889999872     4667999999999999 9999999999998876543210    001223344  44554442 


Q ss_pred             CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHh----CCEEEEecccccccccccccCCCCC-ccc
Q 009673          234 STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAV----GALLMMDMAHISGLVAASVVADPFK-YCD  306 (529)
Q Consensus       234 ~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~----g~~livD~ah~~Gli~~~~~~~~~~-~aD  306 (529)
                           | +++++.+++ ++++|++.+++||+  ..|+++|.++|+++    |+++|+|++|..+...     .++. ++|
T Consensus       128 -----d-~~l~~~i~~-~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-----~~~~~~~d  195 (393)
T 1n8p_A          128 -----L-NDLPQLIKE-NTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-----NPLNFGAD  195 (393)
T ss_dssp             -----H-HHHHHHSCS-SEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-----CGGGGTCS
T ss_pred             -----h-HHHHHhccc-CceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-----CHHHcCCe
Confidence                 7 899999987 79999999888886  78999999999999    9999999998766431     2233 589


Q ss_pred             EEEecccccccCC--CC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673          307 VVTTTTHKSLRGP--RG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC  383 (529)
Q Consensus       307 iv~~S~hK~l~Gp--rg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a  383 (529)
                      ++++|+||+++++  |. |+++++++     ++.+.+...... ..+++.....+++..+++     .+....++..+++
T Consensus       196 i~~~S~sK~~g~~G~rigG~~~~~~~-----~~~~~l~~~~~~-~g~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~  264 (393)
T 1n8p_A          196 IVVHSATKYINGHSDVVLGVLATNNK-----PLYERLQFLQNA-IGAIPSPFDAWLTHRGLK-----TLHLRVRQAALSA  264 (393)
T ss_dssp             EEEEETTTTTTCSSCCCCEEEEESCH-----HHHHHHHHHHHH-HCCCCCHHHHHHHHHHHT-----THHHHHHHHHHHH
T ss_pred             EEEEECcccccCCCCceeEEEEeCCH-----HHHHHHHHHHHh-cCCCCCHHHHHHHHhccc-----hHHHHHHHHHHHH
Confidence            9999999998543  34 99998642     566655432111 011112111111112222     3455667778889


Q ss_pred             HHHHHHHHhcC--cE-EecCC--------------C--C-CceEEEccCCCCCcHHHHHHhHhcCCeEEcCCC------C
Q 009673          384 RALASRLVELG--YK-LVSGG--------------S--D-NHLVLVDLRPMGIDGARVEKILDMASITLNKNS------V  437 (529)
Q Consensus       384 ~~l~~~L~~~G--~~-v~~~g--------------t--~-~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~------~  437 (529)
                      +.+.+.|.+.+  +. +..++              .  . .+++.+.+.....+...+...|+..+|.++.+.      .
T Consensus       265 ~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l~~~~~~~s~G~~~s~~~~  344 (393)
T 1n8p_A          265 NKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESLGGIESLLEV  344 (393)
T ss_dssp             HHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCCSSCEEEC
T ss_pred             HHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhCCcceECCCCCCCcceeec
Confidence            99999987753  32 21121              0  1 345555554210122334444444455554331      2


Q ss_pred             CCCCC------------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          438 PGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       438 Pg~~~------------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      |+..+            ...++.||||+...++    +++++.+.++|+++
T Consensus       345 p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~----~~~i~~l~~al~~~  391 (393)
T 1n8p_A          345 PAVMTHGGIPKEAREASGVFDDLVRISVGIEDT----DDLLEDIKQALKQA  391 (393)
T ss_dssp             TTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCH----HHHHHHHHHHHHHH
T ss_pred             cccccccccCHHHHHhcCCCCCeEEEEEccCCH----HHHHHHHHHHHHHh
Confidence            32211            1124789999876554    78888888877654

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=99.83  E-value=6e-19  Score=185.16  Aligned_cols=326  Identities=15%  Similarity=0.075  Sum_probs=191.9

Q ss_pred             ceeEecCC--CCC----cHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecC-
Q 009673          104 SLELIASE--NFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPL-  175 (529)
Q Consensus       104 ~i~L~ase--n~~----~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~-  175 (529)
                      .+++.++.  +++    +|.|++|+...+... .. +...+| . .+...+    .++.+++++|.+ ++    +|.++ 
T Consensus        44 ~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~-~~-~~~~~~-~-~~~~~~----l~~~la~~~~~~~~~----~v~~~~  111 (419)
T 2eo5_A           44 YLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKL-AH-AAANDF-Y-NIPQLE----LAKKLVTYSPGNFQK----KVFFSN  111 (419)
T ss_dssp             EEESSGGGGTTTTCBSCCHHHHHHHHHHHTTS-CC-CSCSCS-C-CHHHHH----HHHHHHHHSSCSSCE----EEEEES
T ss_pred             EEEccCChhhhccCCCCCHHHHHHHHHHHhhC-cc-cccccc-C-CHHHHH----HHHHHHHhCCCCcCC----EEEEeC
Confidence            46665554  333    799999998877432 11 111111 1 222222    336788999987 43    34444 


Q ss_pred             ChHHHHHHHHHhhcC-CCCEEEEcCCCCCcccccccc------ccccccccccceEEEEEcccCCCCCC-----------
Q 009673          176 SGSPANFEVYTAILK-PHDRIMGLDLPHGGHLSHGFM------TPKRRVSGTSIYFESMPYRLDESTGL-----------  237 (529)
Q Consensus       176 sGs~A~~~~l~all~-pGD~Vl~~~~~~~g~~s~g~~------~~~~~i~~~g~~~~~v~~~v~~~~~~-----------  237 (529)
                      +|++|+..++.++.. +||+|++++|.+.+.......      .++........  .++.++++ +.+.           
T Consensus       112 gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~-~~~~~~~g~~~~~~~  188 (419)
T 2eo5_A          112 SGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMP--GVIHVPYP-NPYRNPWHINGYENP  188 (419)
T ss_dssp             SHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCT--TEEEECCC-CSSSCTTCCCTTTCH
T ss_pred             chHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCC--CCEEECCC-ccccccccccccccc
Confidence            556999999887643 499999999876443210000      00000000111  23333333 2221           


Q ss_pred             -----CCHHHHH-HHhhh----cCCcEEEEcCCCCC-C-CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-CC
Q 009673          238 -----VDYDMLE-KTAIL----FRPKLIIAGASAYP-R-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-AD  300 (529)
Q Consensus       238 -----iD~d~le-~~i~~----~~pklIi~~~s~~p-~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~  300 (529)
                           +|+++|+ +.+++    .++++|+++..+++ + ..+    +++|+++|++||++||+|++|. |+...+.. ..
T Consensus       189 ~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~-~~g~~g~~~~~  267 (419)
T 2eo5_A          189 SELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQM-GLGRTGKLFAI  267 (419)
T ss_dssp             HHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGG
T ss_pred             hhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCccCcchhhH
Confidence                 4789999 88874    25677777654444 3 455    9999999999999999999975 33222211 00


Q ss_pred             C-CC-cccEEEeccccccc-C-CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHH
Q 009673          301 P-FK-YCDVVTTTTHKSLR-G-PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ  376 (529)
Q Consensus       301 ~-~~-~aDiv~~S~hK~l~-G-prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~  376 (529)
                      . .. ..|++  |++|++. | +|.|++++++      ++. .+ .....+..+. +...+++..++++...     +..
T Consensus       268 ~~~~~~~d~~--t~sK~~~~G~~riG~~~~~~------~~~-~~-~~~~~~t~~~-n~~~~~aa~aal~~~~-----~~~  331 (419)
T 2eo5_A          268 ENFNTVPDVI--TLAKALGGGIMPIGATIFRK------DLD-FK-PGMHSNTFGG-NALACAIGSKVIDIVK-----DLL  331 (419)
T ss_dssp             GGGTCCCSEE--EECGGGGTTTSCCEEEEEEG------GGC-CC-------CCCC-CHHHHHHHHHHHHHHH-----HHH
T ss_pred             HhcCCCCCEE--EecccccCCccceEEEEEch------Hhh-cC-CcccCCCCCC-CHHHHHHHHHHHHHHH-----HHH
Confidence            1 11 35666  5679985 4 7779999988      555 44 2112222222 3444455555676532     267


Q ss_pred             HHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCC
Q 009673          377 NKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAM  456 (529)
Q Consensus       377 ~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~  456 (529)
                      +++.+++++|.+.|.+. +..+.+  ...++++++.+...... +.+.|.++||.+...         ..+.+||+.+..
T Consensus       332 ~~~~~~~~~l~~~L~~~-~~~~~~--~g~~~~i~~~~~~~~~~-~~~~l~~~Gv~v~~~---------~~~~lRis~~~~  398 (419)
T 2eo5_A          332 PHVNEIGKIFAEELQGL-ADDVRG--IGLAWGLEYNEKKVRDR-IIGESFKRGLLLLPA---------GRSAIRVIPPLV  398 (419)
T ss_dssp             HHHHHHHHHHHHHHTTS-SSEEEE--ETTEEEEECSCHHHHHH-HHHHHHHTTEECEEE---------TTTEEEECCCTT
T ss_pred             HHHHHHHHHHHHHHHHh-hhheEe--eeEEEEEEEecCccHHH-HHHHHHHCCCEEecC---------CCCEEEEECCCC
Confidence            78888899999999775 322222  23456667642111234 767777899998542         146899986543


Q ss_pred             ccCCCCHHHHHHHHHHHHHHHH
Q 009673          457 TTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       457 tt~g~~~~d~~~la~~i~~~~~  478 (529)
                          .+++|++++++.|++++.
T Consensus       399 ----~t~e~i~~~l~~l~~~l~  416 (419)
T 2eo5_A          399 ----ISEEEAKQGLDILKKVIK  416 (419)
T ss_dssp             ----CCHHHHHHHHHHHHHHHH
T ss_pred             ----CCHHHHHHHHHHHHHHHH
Confidence                458999999999998875

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=99.82  E-value=3.2e-18  Score=177.76  Aligned_cols=313  Identities=14%  Similarity=0.128  Sum_probs=187.5

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----  189 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all----  189 (529)
                      .+|.|++++...+.. +..++.  + + ..+...++    ++++++++|.+.     .+..++|++|+..++.++.    
T Consensus        53 ~~p~v~~a~~~~~~~-~~~~~~--~-~-~~~~~~~l----~~~la~~~~~~~-----v~~~~gg~ea~~~al~~~~~~~~  118 (395)
T 3nx3_A           53 NHAKFNAKIKAQVDK-LLHTSN--L-Y-YNENIAAA----AKNLAKASALER-----VFFTNSGTESIEGAMKTARKYAF  118 (395)
T ss_dssp             SCHHHHHHHHHHHTT-CSCCCT--T-S-BCHHHHHH----HHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHh-cccccc--c-c-CCHHHHHH----HHHHHHhcCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence            479999999887743 222221  1 1 23333333    377888888432     2445777899999888765    


Q ss_pred             ---CCCCEEEEcCCCCCccccccccc-----cccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 009673          190 ---KPHDRIMGLDLPHGGHLSHGFMT-----PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA  261 (529)
Q Consensus       190 ---~pGD~Vl~~~~~~~g~~s~g~~~-----~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~  261 (529)
                         .++|+|++.++.|.+........     +.......+.  ++..++      ..|+++|++++++ ++++|++..++
T Consensus       119 ~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~d~~~l~~~l~~-~~~~v~~~~~~  189 (395)
T 3nx3_A          119 NKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLIS--GVKFAK------YNDISSVEKLVNE-KTCAIILESVQ  189 (395)
T ss_dssp             HTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCS--CEEEEC------TTCHHHHHTTCCT-TEEEEEEESEE
T ss_pred             ccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCC--CcEEeC------CCCHHHHHHhccC-CeEEEEEeCcc
Confidence               46899999998874432110000     0000000011  222222      2379999999976 78888887544


Q ss_pred             CC-C-CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccc-cCCCCeEEEeeCCCc
Q 009673          262 YP-R-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPV  331 (529)
Q Consensus       262 ~p-~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l-~GprgG~i~~~~~~~  331 (529)
                      ++ + ..+    +++|+++|++||++||+|++|. |+...+.. . .... ..|+++  ++|++ .|+|.|++++++   
T Consensus       190 ~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-~~g~~g~~~~~~~~~~~~d~~t--~sK~~~~G~~~G~~~~~~---  263 (395)
T 3nx3_A          190 GEGGINPANKDFYKALRKLCDEKDILLIADEIQC-GMGRSGKFFAYEHAQILPDIMT--SAKALGCGLSVGAFVINQ---  263 (395)
T ss_dssp             CTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEE--ECGGGTTTSCCEEEEECH---
T ss_pred             CCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCCcCCcchhHHhcCCCCCEEE--ecccccCCCceEEEEEch---
Confidence            33 3 334    8999999999999999999965 33211110 0 0011 346665  55988 467889999988   


Q ss_pred             chhHH-HhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cC-cEEecCCCCCc
Q 009673          332 LGVEL-ESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LG-YKLVSGGSDNH  405 (529)
Q Consensus       332 ~~~~l-~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G-~~v~~~gt~~~  405 (529)
                         ++ .+.+......+.++.+.. ..++..++++....+   ++.+++.++.+++.+.|.+    .+ +..+.+  ...
T Consensus       264 ---~~~~~~~~~~~~~~~~~~~~~-~~~aa~aal~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~g~  334 (395)
T 3nx3_A          264 ---KVASNSLEAGDHGSTYGGNPL-VCAGVNAVFEIFKEE---KILENVNKLTPYLEQSLDELINEFDFCKKRKG--LGF  334 (395)
T ss_dssp             ---HHHHHHSCTTCCSSCBSCCHH-HHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE--ETT
T ss_pred             ---hhhhhhcCCcccCCCCCCCHH-HHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe--EEE
Confidence               66 777755433233333333 333333466654322   3445555666666666654    22 222221  234


Q ss_pred             eEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          406 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       406 ~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ++++++.. ..+...+.+.|.+.||.+...         .++.+||+.+..    .+++|++++++.|+++++
T Consensus       335 ~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~---------~~~~iRi~~~~~----~t~e~i~~~l~~l~~~l~  393 (395)
T 3nx3_A          335 MQGLSLDK-SVKVAKVIQKCQENALLLISC---------GENDLRFLPPLI----LQKEHIDEMSEKLRKALK  393 (395)
T ss_dssp             EEEEEECT-TSCHHHHHHHHHHTTEECEEE---------TTTEEEECCCTT----CCHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCC-cchHHHHHHHHHHCCCEEecC---------CCCEEEEECCCC----CCHHHHHHHHHHHHHHHH
Confidence            56666643 235677888888899998532         257899986654    458999999999998875

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.82  E-value=4.1e-19  Score=184.70  Aligned_cols=249  Identities=16%  Similarity=0.120  Sum_probs=164.9

Q ss_pred             chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673          143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI  222 (529)
Q Consensus       143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~  222 (529)
                      ++...+++    +++++++|.+.     .+.++||++|+..++.++++|||+|+++++.|++......    ......|.
T Consensus        58 ~~~~~~l~----~~la~~~g~~~-----~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~----~~~~~~g~  124 (389)
T 3acz_A           58 NPTVEQFE----EMVCSIEGAAG-----SAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFT----HWLPRFGI  124 (389)
T ss_dssp             CHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHH----HHHHHTTC
T ss_pred             ChHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHH----HHHHHcCC
Confidence            45455555    77888999872     3567899999999999999999999999998876432110    00123444


Q ss_pred             eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673          223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD  300 (529)
Q Consensus       223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~  300 (529)
                        +++.++.      .|++++++.+++ ++++|++.+++||+  ..|+++|.++|+++|+++++|++|..+...     .
T Consensus       125 --~~~~v~~------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~-----~  190 (389)
T 3acz_A          125 --EVDLIDT------SDVEKVKAAWKP-NTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFL-----K  190 (389)
T ss_dssp             --EEEEECT------TCHHHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTC-----C
T ss_pred             --EEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccc-----C
Confidence              5556543      489999999987 88999999888876  789999999999999999999998765421     2


Q ss_pred             CCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhccccc-CCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          301 PFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       301 ~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      ++. ++|+++.|+||++.||.   +|++++++.     ++.+++..... .+...+ .....+    ++..+.  .+..+
T Consensus       191 ~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~-----~~~~~l~~~~~~~g~~~~-~~~~~~----~~~~l~--~l~~r  258 (389)
T 3acz_A          191 PLELGADIALHSVSKYINGHGDVIGGVSSAKTA-----EDIATIKFYRKDAGSLMA-PMDAFL----CARGMK--TLPIR  258 (389)
T ss_dssp             GGGTTCSEEEEETTTTTTCSSCCCCEEEEESSH-----HHHHHHHHHHHHHCCCCC-HHHHHH----HHHHHT--THHHH
T ss_pred             ccccCCeEEEECChhhccCCCCceeEEEEECcH-----HHHHHHHHHHHhcCCCCC-HHHHHH----HHcCcc--HHHHH
Confidence            233 68999999999997664   499999872     35554443221 111111 121221    222221  23455


Q ss_pred             HHHHHHHHHHHHHHHHhcC-cE-EecCC---------------CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcC
Q 009673          376 QNKVVSNCRALASRLVELG-YK-LVSGG---------------SDNHLVLVDLRPMGIDGARVEKILDMASITLNK  434 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~~G-~~-v~~~g---------------t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~  434 (529)
                      .++..++++.+.+.|++.+ +. +..++               ....++.+.+.  +  .+.+.+.|++.||.+..
T Consensus       259 ~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~--~--~~~~~~~l~~~~i~~~~  330 (389)
T 3acz_A          259 MQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMK--S--FEAAKKLMEHLKVCTLA  330 (389)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES--S--HHHHHHHHTTCSSSEEB
T ss_pred             HHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEEC--C--HHHHHHHHHhCCCcEEC
Confidence            6777888999999998742 21 11111               01234444443  2  46788889888987654

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=99.81  E-value=6.2e-18  Score=177.77  Aligned_cols=326  Identities=12%  Similarity=0.054  Sum_probs=179.9

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----  189 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all----  189 (529)
                      .+|.|++++...+.. ...+++ .++  ..+...    ..++++++.++.+.++   .+..++|++|+..++.+++    
T Consensus        46 ~~p~v~~a~~~~~~~-~~~~~~-~~~--~~~~~~----~l~~~la~~~~~~~~~---v~~~~gg~ea~~~al~~~~~~~~  114 (430)
T 3i4j_A           46 GRAEVGERMAAQAAR-LPFVHG-SQF--SSDVLE----EYAGRLARFVGLPTFR---FWAVSGGSEATESAVKLARQYHV  114 (430)
T ss_dssp             CCHHHHHHHHHHHHH-CCCCCT-TTC--EEHHHH----HHHHHHHHHTTCTTCE---EEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHh-cccccc-ccc--CCHHHH----HHHHHHHHhCCCCCCE---EEEeCcHHHHHHHHHHHHHHHHH
Confidence            389999999877643 221111 111  122222    3347888999877652   2334567799999998876    


Q ss_pred             ----CCCCEEEEcCCCCCccccccccccccccccccce-----E-------EEEEcccCCCC---CCCCHHHHHHHhhh-
Q 009673          190 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----F-------ESMPYRLDEST---GLVDYDMLEKTAIL-  249 (529)
Q Consensus       190 ----~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-----~-------~~v~~~v~~~~---~~iD~d~le~~i~~-  249 (529)
                          .++|+|++.++.|.+.....       ....+..     +       ....++.+ +.   +..|+++|+++++. 
T Consensus       115 ~~g~~~~~~vi~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~le~~l~~~  186 (430)
T 3i4j_A          115 ERGEPGRFKVITRVPSYHGASLGS-------LAASGMGARRELYTPLMRPEAWPKLPKP-DPARNGAEDAEGLRALLERE  186 (430)
T ss_dssp             HTTCTTCCEEEEETTC--------------------------------CGGGSCEECCC-CTTSCHHHHHTHHHHHHHHH
T ss_pred             hcCCCCCcEEEEEeCCcCCCCccc-------ccccCccccccccCCcCCCCCceEcCCC-cccchhhHHHHHHHHHHHhc
Confidence                45789999998764432110       1111110     0       00111111 11   23467899998874 


Q ss_pred             --cCCcEEEEcCCCC-CC--CCC----HHHHHHHHHHhCCEEEEecccccccccccccC--CCC-C-cccEEEecccccc
Q 009673          250 --FRPKLIIAGASAY-PR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPF-K-YCDVVTTTTHKSL  316 (529)
Q Consensus       250 --~~pklIi~~~s~~-p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~-~-~aDiv~~S~hK~l  316 (529)
                        .++++|+++.+++ ++  ..+    +++|+++|++||++||+|++|. |+...+...  ... . ..|+++  ++|++
T Consensus       187 ~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-~~~~~g~~~~~~~~~~~~~di~t--~sK~l  263 (430)
T 3i4j_A          187 GPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMS-GMGRCGSPLALSRWSGVTPDIAV--LGKGL  263 (430)
T ss_dssp             CGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTTCCCSEEE--ECGGG
T ss_pred             CCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccchhhhhhhcCCCCcEEE--Ecccc
Confidence              3556777765443 32  333    8999999999999999999964 433222110  011 1 246665  56998


Q ss_pred             c-C-CCCeEEEeeCCCcchhHHHhhhccc----ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 009673          317 R-G-PRGGMIFFKKDPVLGVELESAINNA----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL  390 (529)
Q Consensus       317 ~-G-prgG~i~~~~~~~~~~~l~~~i~~~----~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L  390 (529)
                      + | +|.|++++++      ++.+.+...    ......+.+.. ..++..++|+....   +++.+++.++.+.+.+.|
T Consensus       264 ~~G~~r~G~~~~~~------~i~~~~~~~~~~~~~~~t~~~~~~-~~aaa~aal~~~~~---~~~~~~~~~~~~~~~~~l  333 (430)
T 3i4j_A          264 AAGYAPLAGLLAAP------QVYETVMGGSGAFMHGFTYAGHPV-SVAAGLSVLDIVER---EDLTGAAKERGAQLLAGL  333 (430)
T ss_dssp             TTTSSCCEEEEECH------HHHHHHHHTTCBCCCCCTTTTCHH-HHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHH
T ss_pred             cCCccccEEEEECH------HHHHHHhccCCcccccCCCCCCHH-HHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHH
Confidence            4 5 7889999987      777766542    11222233333 33333346765432   234556666666666666


Q ss_pred             Hhc-----CcEEecCCCCCceEEEccCCC--------CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCc
Q 009673          391 VEL-----GYKLVSGGSDNHLVLVDLRPM--------GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMT  457 (529)
Q Consensus       391 ~~~-----G~~v~~~gt~~~~~~v~~~~~--------~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~t  457 (529)
                      .+.     ++..+.+  ...++++++...        .....++.+.|.+.||.+.....+  ..+..++.+||+.+.. 
T Consensus       334 ~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~~~~~~iRi~~~~~-  408 (430)
T 3i4j_A          334 QALQARFPQMMQVRG--TGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGA--EPNGRGDHLLLGPPLS-  408 (430)
T ss_dssp             HHHHHHCTTEEEEEE--ETTEEEEEEC------------CHHHHHHHHHHTTEECC-------------CEEEECCCTT-
T ss_pred             HHHHHhCCCeEEEEE--EEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEecccc--cCCCCCCEEEEECCCC-
Confidence            542     3443332  123555555321        111256777788899998543111  1122356799987644 


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHH
Q 009673          458 TRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       458 t~g~~~~d~~~la~~i~~~~~~  479 (529)
                         .++++++++++.|+++++.
T Consensus       409 ---~t~e~i~~~l~~l~~~l~~  427 (430)
T 3i4j_A          409 ---ITAAEVDGLLALLAGALED  427 (430)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHH
T ss_pred             ---CCHHHHHHHHHHHHHHHHH
Confidence               4589999999999998763

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=99.80  E-value=6.6e-18  Score=178.06  Aligned_cols=330  Identities=15%  Similarity=0.104  Sum_probs=192.3

Q ss_pred             ceeEecCCC-----CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC-CCCceeeecCCh
Q 009673          104 SLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSG  177 (529)
Q Consensus       104 ~i~L~asen-----~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~-~~~~~~V~~~sG  177 (529)
                      .|++..+..     ..+|.|++++...+... . .+...  .+..+.    ....+++++++++... +.   .+..++|
T Consensus        45 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~-~~~~~--~~~~~~----~~~l~~~la~~~~~~~~~~---v~~~~gg  113 (439)
T 3dxv_A           45 LIDLSGAWGAASLGYGHPAIVAAVSAAAANP-A-GATIL--SASNAP----AVTLAERLLASFPGEGTHK---IWFGHSG  113 (439)
T ss_dssp             EEESSTTTTTCTTCBSCHHHHHHHHHHHHSC-S-CSCSS--SSEEHH----HHHHHHHHHHTTTCTTTEE---EEEESSH
T ss_pred             EEECCCchhhccCCCCCHHHHHHHHHHHHhc-c-Ccccc--ccCCHH----HHHHHHHHHHhCCCCCCCE---EEEeCCH
Confidence            456654433     25899999998877532 1 12111  111222    2334478888886544 22   3455777


Q ss_pred             HHHHHHHHHhh--cCCCCEEEEcCCCCCccccccccccccccccccce---E---------EEEEcccCCCCCCC-----
Q 009673          178 SPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY---F---------ESMPYRLDESTGLV-----  238 (529)
Q Consensus       178 s~A~~~~l~al--l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~---~---------~~v~~~v~~~~~~i-----  238 (529)
                      ++|+..++.++  ..++++|++.++.+.+....       .....+..   +         .+..++.+ +.+..     
T Consensus       114 sea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  185 (439)
T 3dxv_A          114 SDANEAAYRAIVKATGRSGVIAFAGAYHGCTVG-------SMAFSGHSVQADAAKADGLILLPYPDPYR-PYRNDPTGDA  185 (439)
T ss_dssp             HHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHH-------HHCC-------------CEEEECCCCSSS-CBTTBTTSHH
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHH-------HHhhcCCCchhhccccCCCCCCcEEcCCC-cccccccHHH
Confidence            89999998875  34678888888765332211       11111110   0         11122221 11112     


Q ss_pred             CHHHHHHHhh---hcCCcEEEEcCCCCC-C-CCC----HHHHHHHHHHhCCEEEEecccccccccccc-cC-CCCC-ccc
Q 009673          239 DYDMLEKTAI---LFRPKLIIAGASAYP-R-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCD  306 (529)
Q Consensus       239 D~d~le~~i~---~~~pklIi~~~s~~p-~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~-~~~~-~aD  306 (529)
                      |+++|++++.   ..++++|++..++++ + ..+    +++|+++|++||++||+|++|. |+...+. .. .... ..|
T Consensus       186 d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~-g~g~~g~~~~~~~~~~~~d  264 (439)
T 3dxv_A          186 ILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKV-GLARSGRLHCFEHEGFVPD  264 (439)
T ss_dssp             HHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-CTTTTSSSSGGGGTTCCCS
T ss_pred             HHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhcCCCCC
Confidence            7999999994   336678888755443 2 455    9999999999999999999975 5432221 11 0111 357


Q ss_pred             EEEecccccc-cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Q 009673          307 VVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA  385 (529)
Q Consensus       307 iv~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~  385 (529)
                      ++  |++|++ +|+|.|++++++      ++.+.+......... + +...+++...+++....   .++.+++.++.+.
T Consensus       265 i~--s~sK~~~~G~riG~~~~~~------~~~~~~~~~~~~~t~-~-~~~~~~aa~aal~~~~~---~~~~~~~~~~~~~  331 (439)
T 3dxv_A          265 IL--VLGKGLGGGLPLSAVIAPA------EILDCASAFAMQTLH-G-NPISAAAGLAVLETIDR---DDLPAMAERKGRL  331 (439)
T ss_dssp             EE--EECGGGGTTSCCEEEEEEH------HHHTSCSSSSCCTTT-T-CHHHHHHHHHHHHHHHH---TTHHHHHHHHHHH
T ss_pred             EE--EEcchhcCCcceEEEEECH------HHHhhhcCCCcCCCc-c-cHHHHHHHHHHHHHHHh---cCHHHHHHHHHHH
Confidence            76  677998 467889999988      777777654322223 3 33333333345665432   2345666677777


Q ss_pred             HHHHHHhc----C-cEEecCCCCCceEEEccC-------CCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEcc
Q 009673          386 LASRLVEL----G-YKLVSGGSDNHLVLVDLR-------PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS  453 (529)
Q Consensus       386 l~~~L~~~----G-~~v~~~gt~~~~~~v~~~-------~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~  453 (529)
                      +.+.|.+.    + +..+.+  ...++++++.       +.+.+...+.+.|.+.||.+...    .   ..++.+||+.
T Consensus       332 ~~~~l~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----~---~~~~~iRi~~  402 (439)
T 3dxv_A          332 LRDGLSELAKRHPLIGDIRG--RGLACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYV----G---MNGNVLEFTP  402 (439)
T ss_dssp             HHHHHHHHHHHCTTEEEEEE--ETTEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEE----S---TTSCEEEECC
T ss_pred             HHHHHHHHHHhCCCeEEEEE--EEEEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeec----C---CCCCEEEEEC
Confidence            77777652    2 222222  2344555542       11222455777777789998542    1   1247899986


Q ss_pred             CCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          454 PAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       454 ~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +..    .+++|++++++.|++++..
T Consensus       403 ~~~----~t~e~i~~~l~~l~~~l~~  424 (439)
T 3dxv_A          403 PLT----ITETDIHKALDLLDRAFSE  424 (439)
T ss_dssp             CTT----CCHHHHHHHHHHHHHHHHT
T ss_pred             CCC----CCHHHHHHHHHHHHHHHHH
Confidence            644    4589999999999998864

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=99.80  E-value=6.3e-18  Score=178.81  Aligned_cols=319  Identities=15%  Similarity=0.058  Sum_probs=192.0

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC--
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRY-YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--  190 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~-~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--  190 (529)
                      .++.|++|+...+.+. .  +  .++ ....+...+    .+++++++++.+.+.   .+..++|++|+..++.++..  
T Consensus        67 ~~~~v~~a~~~~~~~~-~--~--~~~~~~~~~~~~~----l~~~la~~~~~~~~~---v~~~~ggsea~~~al~~~~~~~  134 (449)
T 3a8u_X           67 TRKEIQEAVAKQLSTL-D--Y--SPGFQYGHPLSFQ----LAEKITDLTPGNLNH---VFFTDSGSECALTAVKMVRAYW  134 (449)
T ss_dssp             SCHHHHHHHHHHTTTC-S--C--CCSSSCCCHHHHH----HHHHHHTTSSTTEEE---EEEESSHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhC-C--C--ccccccCCHHHHH----HHHHHHHhCCCCCCE---EEEcCcHHHHHHHHHHHHHHHH
Confidence            4799999998877432 1  1  111 111222333    337788888766542   23456677999999887753  


Q ss_pred             ------CCCEEEEcCCCCCcccccccccccccccccc------------ceEEEEEcccCCC-C-CCCC--------HHH
Q 009673          191 ------PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDES-T-GLVD--------YDM  242 (529)
Q Consensus       191 ------pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g------------~~~~~v~~~v~~~-~-~~iD--------~d~  242 (529)
                            +||+|++.++.|.+....       .+...|            ..+..++++.... . ..+|        +++
T Consensus       135 ~~~g~~~~~~vi~~~~~yhg~~~~-------~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~  207 (449)
T 3a8u_X          135 RLKGQATKTKMIGRARGYHGVNIA-------GTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADE  207 (449)
T ss_dssp             HHTTCTTCCEEEEETTCCCCSSHH-------HHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHH
T ss_pred             HhcCCCCCCEEEEECCCcCCCChh-------hhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHH
Confidence                  789999999877543211       011111            1124444332100 1 1246        999


Q ss_pred             HHHHhhh---cCCcEEEEcCCCCC-C-CCC----HHHHHHHHHHhCCEEEEecccc-cccccccccC-CCCC-cccEEEe
Q 009673          243 LEKTAIL---FRPKLIIAGASAYP-R-DFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVVA-DPFK-YCDVVTT  310 (529)
Q Consensus       243 le~~i~~---~~pklIi~~~s~~p-~-~~d----~~~i~~ia~~~g~~livD~ah~-~Gli~~~~~~-~~~~-~aDiv~~  310 (529)
                      |++++++   .++++|+++..+++ + ..+    +++|+++|++||++||+|++|. +|.... ... ..+. ..|++  
T Consensus       208 le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~-~~~~~~~~~~~di~--  284 (449)
T 3a8u_X          208 LLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGS-MFGADSFGVTPDLM--  284 (449)
T ss_dssp             HHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSHHHHHTCCCSEE--
T ss_pred             HHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCc-chhhhhcCCCCCEE--
Confidence            9999974   25677777654332 3 567    9999999999999999999974 432211 000 0001 35776  


Q ss_pred             cccccccC--CCCeEEEeeCCCcchhHHHhhhccc---------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHH
Q 009673          311 TTHKSLRG--PRGGMIFFKKDPVLGVELESAINNA---------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV  379 (529)
Q Consensus       311 S~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~---------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i  379 (529)
                      |++|+|+|  .|.|++++++      ++.+.+...         ...+..++ +...+++..++++.+...   ++.+++
T Consensus       285 s~sK~l~~G~~~~G~~~~~~------~~~~~l~~~~~~~~~~~~~~~~t~~~-~~~~~aa~~aal~~~~~~---~~~~~~  354 (449)
T 3a8u_X          285 CIAKQVTNGAIPMGAVIAST------EIYQTFMNQPTPEYAVEFPHGYTYSA-HPVACAAGLAALCLLQKE---NLVQSV  354 (449)
T ss_dssp             EECGGGGTTSSCCEEEEEEH------HHHHHHHTCSSCTTSCSSCCCCTTTT-CHHHHHHHHHHHHHHHHT---THHHHH
T ss_pred             EEcccccCCCCceEEEEECH------HHHHHhhccCcccccccccccCCCcc-cHHHHHHHHHHHHHHHhc---CHHHHH
Confidence            56699965  6889999987      676666442         11112222 334444545567654322   456778


Q ss_pred             HHHHHHHHHHHHhcC-cEEecC-CCCCceEEEccCCCCC----cHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEcc
Q 009673          380 VSNCRALASRLVELG-YKLVSG-GSDNHLVLVDLRPMGI----DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS  453 (529)
Q Consensus       380 ~~~a~~l~~~L~~~G-~~v~~~-gt~~~~~~v~~~~~~i----~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~  453 (529)
                      .++++.+.+.|++.+ +.++.. .....++++++.....    +...+.+.|.++||.+..    +      .+.+||+.
T Consensus       355 ~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~------g~~iRis~  424 (449)
T 3a8u_X          355 AEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRF----G------GDTLQFGP  424 (449)
T ss_dssp             HHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEE----E------TTEEEECC
T ss_pred             HHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcccccccHHHHHHHHHHCCcEEec----C------CCEEEEEC
Confidence            888888999997732 322210 0123566777653211    123577777778999853    2      26899997


Q ss_pred             CCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          454 PAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       454 ~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +..    .+++|++++++.|++++.
T Consensus       425 ~~~----~t~~~i~~~l~~l~~~l~  445 (449)
T 3a8u_X          425 TFN----SKPQDLDRLFDAVGEVLN  445 (449)
T ss_dssp             CTT----CCHHHHHHHHHHHHHHHH
T ss_pred             CCc----CCHHHHHHHHHHHHHHHH
Confidence            643    458999999999998875

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=99.79  E-value=5.1e-19  Score=184.13  Aligned_cols=280  Identities=13%  Similarity=0.031  Sum_probs=175.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCC----EEEEcCCCCCcccccccccccccccccc
Q 009673          147 DELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       147 d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD----~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      .++++.+.+++. ..|.+...- .+|.+++|+ +++..++.++++|||    +|++.+|.|.++..        .+...|
T Consensus        71 ~~lr~aia~~~~-~~g~~~~~~-~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~--------~~~~~g  140 (391)
T 3bwn_A           71 PELEDAIKDLHG-VVGNAATED-RYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVE--------ETTYVR  140 (391)
T ss_dssp             HHHHHHHHHHHH-HHCSBCCSS-SEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHH--------HHHTTC
T ss_pred             HHHHHHHHHHHH-hcCCCCCCC-CeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHH--------HHHHcC
Confidence            466655555554 455543210 256678888 999999999999999    99999998865431        233445


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhC--CEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG--ALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g--~~livD~ah~~Gli~~~~~~  299 (529)
                      .  +++.+++|.+.  ++        .+ ++|+|++++|+||+-.-+.+|++  ++++  ++||+|++|+.+.      .
T Consensus       141 ~--~~~~~~~d~~~--l~--------~~-~~k~v~l~~p~NPtG~~~~~l~~--~~~~~~~~ii~De~y~~~~------~  199 (391)
T 3bwn_A          141 S--GMYKWEGDAWG--FD--------KK-GPYIELVTSPNNPDGTIRETVVN--RPDDDEAKVIHDFAYYWPH------Y  199 (391)
T ss_dssp             B--TTEEEEEESTT--CC--------CC-SCEEEEEESSCTTTCCCCCCCC-------CCCEEEEECTTCSTT------T
T ss_pred             C--eEEEecCCHHH--cC--------CC-CCEEEEECCCCCCCchhHHHHHH--HhhcCCCEEEEeCCCCCCC------C
Confidence            4  34455555322  21        13 78999999999997211224433  2255  9999999976321      1


Q ss_pred             CCC---CcccEEEecccccc--cCCCCeEEEe-eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-----
Q 009673          300 DPF---KYCDVVTTTTHKSL--RGPRGGMIFF-KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-----  368 (529)
Q Consensus       300 ~~~---~~aDiv~~S~hK~l--~GprgG~i~~-~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-----  368 (529)
                      .++   ...+++++|+||++  +|+|.||+++ ++      ++.+.+.........+.+.. ...++..+|+...     
T Consensus       200 ~~l~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~------~l~~~l~~~~~~~~~~~~~~-~q~a~~~~l~~~~~~~~~  272 (391)
T 3bwn_A          200 TPITRRQDHDIMLFTFSKITGHAGSRIGWALVKDK------EVAKKMVEYIIVNSIGVSKE-SQVRTAKILNVLKETCKS  272 (391)
T ss_dssp             SCCCCCBCCSEEEEEHHHHHSCGGGCEEEEEECCH------HHHHHHHHHHHHHHSSCCHH-HHHHHHHHHHHHHHHTTC
T ss_pred             CccccCCCCeEEEEechhhcCCCccceEEEEecCH------HHHHHHHHHhcccccCCCHH-HHHHHHHHHhCcchhccc
Confidence            122   14579999999986  6889999998 55      66666554321111223333 3334444665431     


Q ss_pred             ----CchHHHHHHHHHHHHHHHHHHHHhc-CcEEecC-CC-----------CCceEEEccCCCCCcHHHHHHhHhcCCeE
Q 009673          369 ----SPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG-GS-----------DNHLVLVDLRPMGIDGARVEKILDMASIT  431 (529)
Q Consensus       369 ----~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~-gt-----------~~~~~~v~~~~~~i~~~~~~~~L~~~GI~  431 (529)
                          ....++.++.+.++++.+.+.|++. |+.+..+ ++           ...++|+++..    .+.+.++|+++||.
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~----~~~~~~~l~~~gV~  348 (391)
T 3bwn_A          273 ESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKE----ETDLVSELRRHKVM  348 (391)
T ss_dssp             CCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESS----SCCHHHHHHHTTEE
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCc----HHHHHHHHHHCCEE
Confidence                3345778888999999999999885 6665432 11           11246777752    24577888899999


Q ss_pred             EcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          432 LNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       432 v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +..+...|    ..++++||++.      .++++++++++.|+++++
T Consensus       349 v~pg~~fg----~~~~~iRis~~------~~~e~i~~~~~~L~~~~~  385 (391)
T 3bwn_A          349 SRAGERCG----SDKKHVRVSML------SREDVFNVFLERLANMKL  385 (391)
T ss_dssp             CEEGGGGT----CCTTEEEEESC------SCHHHHHHHHHHHHSCC-
T ss_pred             EccCCCCC----CCCCEEEEEec------CCHHHHHHHHHHHHHHHH
Confidence            96543222    13578999974      257899999999887654

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.79  E-value=6.9e-18  Score=176.21  Aligned_cols=216  Identities=18%  Similarity=0.149  Sum_probs=147.2

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccc-cccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRR-VSGT  220 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~-i~~~  220 (529)
                      +++...++|    +++++++|.+.     .+.++||++|+.+ +.++++|||+|++.++.|++.+....    .. ....
T Consensus        65 ~~p~~~~l~----~~la~l~g~~~-----~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~----~~~~~~~  130 (400)
T 3nmy_A           65 HNPTRFAYE----RCVAALEGGTR-----AFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFE----RVRRRTA  130 (400)
T ss_dssp             CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHH----HTHHHHH
T ss_pred             CCHHHHHHH----HHHHHHhCCCC-----EEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHH----HhhHhhc
Confidence            456666666    67888999763     3567899999987 67889999999999998865432110    00 1112


Q ss_pred             cceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccccccccc
Q 009673          221 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV  298 (529)
Q Consensus       221 g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~  298 (529)
                      |.  +++.++.+      |++++++++++ ++++|++..++||+  ..|+++|+++|++||+++|+|++|..+...    
T Consensus       131 g~--~~~~v~~~------d~~~l~~~i~~-~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~----  197 (400)
T 3nmy_A          131 GL--DFSFVDLT------DPAAFKAAIRA-DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQ----  197 (400)
T ss_dssp             CC--EEEEECTT------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHC----
T ss_pred             Ce--EEEEECCC------CHHHHHHHhcc-CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccC----
Confidence            43  55565432      89999999987 89999999888886  779999999999999999999998655331    


Q ss_pred             CCCCC-cccEEEecccccccCC---CCe-EEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHH
Q 009673          299 ADPFK-YCDVVTTTTHKSLRGP---RGG-MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK  373 (529)
Q Consensus       299 ~~~~~-~aDiv~~S~hK~l~Gp---rgG-~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~  373 (529)
                       .++. ++|+++.|+||++.|+   .|| +++..++     ++.+++...... ...+.+.  ..+ +.+++.+  ..+.
T Consensus       198 -~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~-----~~~~~l~~~~~~-~g~~~~~--~~a-~~~l~~l--~~l~  265 (400)
T 3nmy_A          198 -RPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNA-----ELAEQMAFLQNS-IGGVQGP--FDS-FLALRGL--KTLP  265 (400)
T ss_dssp             -CGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCH-----HHHHHHHHHHHH-HCCBCCH--HHH-HHHHHHH--TTHH
T ss_pred             -ChhhcCCcEEEecCccccCCCCCcceeEEEEeCCH-----HHHHHHHHHHHh-cCCCCCH--HHH-HHHHHhH--hHHH
Confidence             2333 6899999999999876   457 5665553     565555432111 0111111  111 1223332  2345


Q ss_pred             HHHHHHHHHHHHHHHHHHhc-CcE
Q 009673          374 VYQNKVVSNCRALASRLVEL-GYK  396 (529)
Q Consensus       374 ~~~~~i~~~a~~l~~~L~~~-G~~  396 (529)
                      .+.++..+|++.+.+.|++. .+.
T Consensus       266 ~r~~~~~~~a~~l~~~L~~~p~v~  289 (400)
T 3nmy_A          266 LRMRAHCENALALAQWLETHPAIE  289 (400)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTEE
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCEe
Confidence            67788899999999999873 443

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.79  E-value=6e-18  Score=177.85  Aligned_cols=158  Identities=20%  Similarity=0.170  Sum_probs=118.0

Q ss_pred             chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673          143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI  222 (529)
Q Consensus       143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~  222 (529)
                      ++...+++    +++++++|.+.     .|.++||++|+..++.+++++||+|++..+.|.+......    ......|.
T Consensus        57 ~~~~~~l~----~~la~~~g~~~-----~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~----~~~~~~g~  123 (421)
T 2ctz_A           57 NPTVDVLE----KRLAALEGGKA-----ALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFK----VTLKRLGI  123 (421)
T ss_dssp             CHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHH----THHHHTTC
T ss_pred             ChHHHHHH----HHHHHHhCCCc-----eEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHH----HHHHHcCC
Confidence            34455555    67888999873     3567999999999999999999999999998866532110    00123343


Q ss_pred             eEEEEEc-ccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccc-cccccccccc
Q 009673          223 YFESMPY-RLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAH-ISGLVAASVV  298 (529)
Q Consensus       223 ~~~~v~~-~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah-~~Gli~~~~~  298 (529)
                        +++.+ +.+      |++++++.+++ ++++|++..++||+  ..|+++|.++|+++|+++|+|++| ..|...    
T Consensus       124 --~~~~~~~~~------d~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~----  190 (421)
T 2ctz_A          124 --EVRFTSREE------RPEEFLALTDE-KTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLL----  190 (421)
T ss_dssp             --EEEECCTTC------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSC----
T ss_pred             --EEEEECCCC------CHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccccC----
Confidence              66666 432      89999999987 89999998888775  789999999999999999999998 766321    


Q ss_pred             CCCCC-cccEEEecccccccCCC--CeEEEee
Q 009673          299 ADPFK-YCDVVTTTTHKSLRGPR--GGMIFFK  327 (529)
Q Consensus       299 ~~~~~-~aDiv~~S~hK~l~Gpr--gG~i~~~  327 (529)
                       .++. ++|++++|+||++.||.  .|++++.
T Consensus       191 -~~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~  221 (421)
T 2ctz_A          191 -RPLAWGAALVTHSLTKWVGGHGAVIAGAIVD  221 (421)
T ss_dssp             -CGGGGTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred             -CccccCCeEEEECCcccccCCCCcEEEEEEe
Confidence             2233 58999999999997654  2544443

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=99.79  E-value=2.4e-17  Score=173.30  Aligned_cols=326  Identities=14%  Similarity=0.081  Sum_probs=189.0

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc--CC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP  191 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--~p  191 (529)
                      .+|.|++++...+... ..  .... |. .+...++    .++++++++.+.+.   .+..++|++|+..++.++.  ..
T Consensus        60 ~~p~v~~a~~~~~~~~-~~--~~~~-~~-~~~~~~l----~~~la~~~~~~~~~---v~~~~gg~ea~~~a~~~~~~~~~  127 (433)
T 1zod_A           60 CHPEIVSVIGEYAGKL-DH--LFSE-ML-SRPVVDL----ATRLANITPPGLDR---ALLLSTGAESNEAAIRMAKLVTG  127 (433)
T ss_dssp             TCHHHHHHHHHHHHHC-CC--CCTT-CC-CHHHHHH----HHHHHHHSCTTCCE---EEEESCHHHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHhC-cc--cccc-cC-CHHHHHH----HHHHHHhCCCCcCE---EEEeCchHHHHHHHHHHHHHhhC
Confidence            4899999998877532 11  1111 11 2222333    36788899876542   2334567799999887653  24


Q ss_pred             CCEEEEcCCCCCccccccc----cccccc--cccccceEEEEEcccCCC-C--------CCCCHHHHHHHhhh---cCCc
Q 009673          192 HDRIMGLDLPHGGHLSHGF----MTPKRR--VSGTSIYFESMPYRLDES-T--------GLVDYDMLEKTAIL---FRPK  253 (529)
Q Consensus       192 GD~Vl~~~~~~~g~~s~g~----~~~~~~--i~~~g~~~~~v~~~v~~~-~--------~~iD~d~le~~i~~---~~pk  253 (529)
                      +|+|++.++.+.|......    ..+...  ....+  ...++++.... .        +.+|+++|++.+++   .+++
T Consensus       128 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~  205 (433)
T 1zod_A          128 KYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVG--SFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLA  205 (433)
T ss_dssp             CCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTT--EEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEE
T ss_pred             CCeEEEECCCcCCCChhHHhhcCCccccccCCCCCC--ceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeE
Confidence            5899999987644321000    000000  00112  24444332100 1        12479999999874   3567


Q ss_pred             EEEEcCCCCC-C-CCC----HHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-cccEEEecccccc-cCCCCe
Q 009673          254 LIIAGASAYP-R-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSL-RGPRGG  322 (529)
Q Consensus       254 lIi~~~s~~p-~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~-~aDiv~~S~hK~l-~GprgG  322 (529)
                      +|+++..+++ + ..+    +++|+++|++||++||+|++|. |+...+.. ..+   . ..|++  |++|+| .|.|.|
T Consensus       206 ~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-~~g~~g~~-~~~~~~~~~~di~--s~sK~~~~G~~ig  281 (433)
T 1zod_A          206 AFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQT-GVGRTGTM-FACQRDGVTPDIL--TLSKTLGAGLPLA  281 (433)
T ss_dssp             EEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSS-STHHHHTCCCSEE--EECHHHHTTSSCE
T ss_pred             EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CCCcCchH-hHHhhcCCCCCEE--EecccccCCCCee
Confidence            7887654443 2 334    9999999999999999999976 33222210 011   1 34665  566998 457779


Q ss_pred             EEEeeCCCcchhHHHhhhcccccC--CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----C-c
Q 009673          323 MIFFKKDPVLGVELESAINNAVFP--GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----G-Y  395 (529)
Q Consensus       323 ~i~~~~~~~~~~~l~~~i~~~~~p--~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~----G-~  395 (529)
                      ++++++      ++.+.+....+.  +..+++. ...++..++++.+...   ++.+++.++++.+.+.|++.    + +
T Consensus       282 ~~~~~~------~~~~~~~~~~~~~~~t~~~~~-~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~  351 (433)
T 1zod_A          282 AIVTSA------AIEERAHELGYLFYTTHVSDP-LPAAVGLRVLDVVQRD---GLVARANVMGDRLRRGLLDLMERFDCI  351 (433)
T ss_dssp             EEEECH------HHHHHHHHTTCCCCCTTTTCH-HHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred             EEEEhH------HHHHhhccCCCCCCCCCCcCH-HHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence            999987      677666542211  2233333 3344444567654332   34566777788888888662    2 2


Q ss_pred             EEecCCCCCceEEEccCCC-------CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHH
Q 009673          396 KLVSGGSDNHLVLVDLRPM-------GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVA  468 (529)
Q Consensus       396 ~v~~~gt~~~~~~v~~~~~-------~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~  468 (529)
                      ..+.+  ...++++++...       ..+...+.+.|.++||.+..    |.... .++.+||+.+..    .+++|+++
T Consensus       352 ~~~~~--~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~~~~~-~~~~lRi~~~~~----~t~~~i~~  420 (433)
T 1zod_A          352 GDVRG--RGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNI----VQLPG-MGGVFRIAPPLT----VSEDEIDL  420 (433)
T ss_dssp             EEEEE--ETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCE----ECCTT-SCCEEEECCCTT----CCHHHHHH
T ss_pred             EEEEE--EEEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEec----cCCCC-CCCEEEEECCcC----CCHHHHHH
Confidence            22222  234556665321       12356677777789999854    32111 247899986643    45899999


Q ss_pred             HHHHHHHHHH
Q 009673          469 IADFIHEGVE  478 (529)
Q Consensus       469 la~~i~~~~~  478 (529)
                      +++.|+++++
T Consensus       421 ~l~~l~~~l~  430 (433)
T 1zod_A          421 GLSLLGQAIE  430 (433)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998875

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=99.79  E-value=9e-17  Score=170.16  Aligned_cols=330  Identities=15%  Similarity=0.061  Sum_probs=188.0

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----  189 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all----  189 (529)
                      .+|.|.+|+...+... .. .+   .....+...    ..+++++++++.+.+    .+..++|++|+..++.++.    
T Consensus        66 ~~p~v~~A~~~~~~~~-~~-~~---~~~~~~~~~----~la~~l~~~~~~~~~----v~~~~ggseA~~~al~~~~~~~~  132 (452)
T 3n5m_A           66 GRKELAEAAYKQLQTL-SY-FP---MSQSHEPAI----KLAEKLNEWLGGEYV----IFFSNSGSEANETAFKIARQYYA  132 (452)
T ss_dssp             CCHHHHHHHHHHHTTC-CC-CC---TTSEEHHHH----HHHHHHHHHHTSCEE----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhc-CC-cc---cccCCHHHH----HHHHHHHHhCCCCce----EEEeCchHHHHHHHHHHHHHHHH
Confidence            4799999998877432 11 11   111222222    334778888887653    2445677899999998876    


Q ss_pred             -C---CCCEEEEcCCCCCccccccc-----cccccccccccceEEEEEcccCCCC---------CCCCHHHHHHHhh---
Q 009673          190 -K---PHDRIMGLDLPHGGHLSHGF-----MTPKRRVSGTSIYFESMPYRLDEST---------GLVDYDMLEKTAI---  248 (529)
Q Consensus       190 -~---pGD~Vl~~~~~~~g~~s~g~-----~~~~~~i~~~g~~~~~v~~~v~~~~---------~~iD~d~le~~i~---  248 (529)
                       .   ++|+|++.++.|.|......     ........-....+..++.+.....         +..++++|++.++   
T Consensus       133 ~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~  212 (452)
T 3n5m_A          133 QKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWEL  212 (452)
T ss_dssp             TTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHC
T ss_pred             hcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcC
Confidence             5   88999999988644321000     0000000000001122222110000         0112899999987   


Q ss_pred             hcCCcEEEEcCC-CCCC-CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-CC-CCC-cccEEEecccccc-cC
Q 009673          249 LFRPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-AD-PFK-YCDVVTTTTHKSL-RG  318 (529)
Q Consensus       249 ~~~pklIi~~~s-~~p~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~-~~~-~aDiv~~S~hK~l-~G  318 (529)
                      ..++++|+++.+ +|.+ ..+    +++|+++|++||++||+|++|. |+...+.. .. ... ..|+++  ++|++ .|
T Consensus       213 ~~~~~~vi~ep~~~n~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~g~~g~~~~~~~~~~~~di~t--~sK~l~~G  289 (452)
T 3n5m_A          213 SETIAAFIMEPIITGGGILMAPQDYMKAVHETCQKHGALLISDEVIC-GFGRTGKAFGFMNYDVKPDIIT--MAKGITSA  289 (452)
T ss_dssp             GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTCCCSEEE--ECGGGGTT
T ss_pred             CCCEEEEEEccccCCCCeeeCCHHHHHHHHHHHHHcCCEEEEecchh-CCCcccccchhhhcCCCCCEEe--ecccccCC
Confidence            236778888865 4443 444    9999999999999999999964 43222211 00 011 356765  56987 46


Q ss_pred             -CCCeEEEeeCCCcchhHHHhhhcc----cc--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Q 009673          319 -PRGGMIFFKKDPVLGVELESAINN----AV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLV  391 (529)
Q Consensus       319 -prgG~i~~~~~~~~~~~l~~~i~~----~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~  391 (529)
                       +|.|++++++      ++.+.+..    ..  ..+..+++.....++ .++++.+..   +++.+++.++.+++.+.|.
T Consensus       290 ~~~ig~~~~~~------~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~---~~~~~~~~~~~~~l~~~L~  359 (452)
T 3n5m_A          290 YLPLSATAVKR------EIYEAFKGKGEYEFFRHINTFGGNPAACALA-LKNLEIIEN---ENLIERSAQMGSLLLEQLK  359 (452)
T ss_dssp             SSCCEEEEEEH------HHHGGGCSSSTTCSCCCCCSSTTCHHHHHHH-HHHHHHHHH---TTHHHHHHHHHHHHHHHHH
T ss_pred             CcceEEEEECH------HHHHHHhhccCCCCccccCCCCCCHHHHHHH-HHHHHHHHh---ccHHHHHHHHHHHHHHHHH
Confidence             6779999988      78777743    11  112233333333333 346765432   2345666777777777776


Q ss_pred             hc--C---cEEecCCCCCceEEEccCCCC-----Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCcc
Q 009673          392 EL--G---YKLVSGGSDNHLVLVDLRPMG-----ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTT  458 (529)
Q Consensus       392 ~~--G---~~v~~~gt~~~~~~v~~~~~~-----i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt  458 (529)
                      +.  +   +..+.+  ...++++++....     .+   ...+.+.|.+.||.+.....+.   +..++.|||+.+..  
T Consensus       360 ~~~~~~~~~~~~~~--~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~---~~~~~~iRi~~~~~--  432 (452)
T 3n5m_A          360 EEIGEHPLVGDIRG--KGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTT---AGYNNILTLAPPLV--  432 (452)
T ss_dssp             HHHTTCTTEEEEEE--SSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSS---TTCCCEEEECCCTT--
T ss_pred             HHHhcCCCeEEEEE--EEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCccc---CCCCCEEEEECCCC--
Confidence            52  2   222222  1234444442111     01   1356777778999986543221   22357899986644  


Q ss_pred             CCCCHHHHHHHHHHHHHHHH
Q 009673          459 RGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       459 ~g~~~~d~~~la~~i~~~~~  478 (529)
                        .+++|++++++.|+++++
T Consensus       433 --~t~e~i~~~l~~l~~~l~  450 (452)
T 3n5m_A          433 --ISSEEIAFVIGTLKTAME  450 (452)
T ss_dssp             --CCHHHHHHHHHHHHHHHT
T ss_pred             --CCHHHHHHHHHHHHHHHH
Confidence              458999999999988764

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=99.79  E-value=3.2e-17  Score=174.19  Aligned_cols=323  Identities=12%  Similarity=0.012  Sum_probs=192.5

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK---  190 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~---  190 (529)
                      .+|.|.+|+...+.. +.....+ ++  ..+...+    .+++++++++...+.   .+..+||++|+..++..+..   
T Consensus        92 ~~p~v~~A~~~~~~~-~~~~~~~-~~--~~~~~~~----L~e~la~~~~~~~~~---v~~~~sGseA~~~Alk~a~~~~~  160 (457)
T 3tfu_A           92 GHPALDQALTTQLRV-MNHVMFG-GL--THEPAAR----LAKLLVDITPAGLDT---VFFSDSGSVSVEVAAKMALQYWR  160 (457)
T ss_dssp             TCHHHHHHHHHHHHH-CSCCCSS-SE--ECHHHHH----HHHHHHHHSSTTEEE---EEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHh-ccCcccc-cc--CCHHHHH----HHHHHHHhCCCCcCE---EEEeCcHHHHHHHHHHHHHHHHH
Confidence            589999999887753 2211111 11  1222223    347888999766542   24456788999999887764   


Q ss_pred             ----CCC-EEEEcCCCCCcccccc------ccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh--cCCcEEEE
Q 009673          191 ----PHD-RIMGLDLPHGGHLSHG------FMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIA  257 (529)
Q Consensus       191 ----pGD-~Vl~~~~~~~g~~s~g------~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~--~~pklIi~  257 (529)
                          ||+ +|++.++.|.|.....      ...+..........+..++++.+ .....|+++|++++++  .++++|++
T Consensus       161 ~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~d~~~le~~l~~~~~~~aavi~  239 (457)
T 3tfu_A          161 GRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPR-DYDPAYSAAFEAQLAQHAGELAAVVV  239 (457)
T ss_dssp             HTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCS-SCCHHHHHHHHHHHHHHGGGEEEEEE
T ss_pred             hcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCc-ccCHHHHHHHHHHHHhCCCCEEEEEE
Confidence                665 8888887764321000      00000000000011223333322 1123588999999973  26778888


Q ss_pred             cC-CCCCC--CCC----HHHHHHHHHHhCCEEEEecccccccccccccCCCCC----cccEEEecccccccC--CCCeEE
Q 009673          258 GA-SAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSLRG--PRGGMI  324 (529)
Q Consensus       258 ~~-s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~----~aDiv~~S~hK~l~G--prgG~i  324 (529)
                      .. .++++  ..+    +++|+++|++||++||+|++| .|+...+.. ..++    ..|++  |++|+|+|  +|.|++
T Consensus       240 ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~-~g~gr~G~~-~a~~~~~~~pdii--t~sK~l~gG~~~lG~v  315 (457)
T 3tfu_A          240 EPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIA-TGFGRTGAL-FAADHAGVSPDIM--CVGKALTGGYLSLAAT  315 (457)
T ss_dssp             CSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTT-TTTTTTSSS-STHHHHTCCCSEE--EECGGGGTTSSCCEEE
T ss_pred             eCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCc-cCCccccch-hHhHhcCCCceEE--EEChhhhCCCcceEEE
Confidence            76 55543  222    899999999999999999995 443222211 1111    35777  56699977  689999


Q ss_pred             EeeCCCcchhHHHhhhc---cc--ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----Cc
Q 009673          325 FFKKDPVLGVELESAIN---NA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----GY  395 (529)
Q Consensus       325 ~~~~~~~~~~~l~~~i~---~~--~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~----G~  395 (529)
                      ++++      ++.+.+.   ..  ......+++.. ..++..++|+.+..+   ++.+++.++.+++.+.|++.    ++
T Consensus       316 ~~~~------~i~~~~~~~~~~~~~~~~t~~~n~~-a~aaa~aaL~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~v  385 (457)
T 3tfu_A          316 LCTA------DVAHTISAGAAGALMHGPTFMANPL-ACAVSVASVELLLGQ---DWRTRITELAAGLTAGLDTARALPAV  385 (457)
T ss_dssp             EEEH------HHHHHHHHSSSCSCCCCCTTTTCHH-HHHHHHHHHHHHHTS---CHHHHHHHHHHHHHHHHGGGGGSTTE
T ss_pred             EEcH------HHHHHhhccCCCceeEecCCCcCHH-HHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence            9998      6777663   11  11122333333 333333467765443   34666777788888888763    23


Q ss_pred             EEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          396 KLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       396 ~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      ..+.+  ...+.++++.. ..+..++.+.|.+.||.+..    .      .+.+||+.+..    .+++|++++++.|++
T Consensus       386 ~~vr~--~G~~~~i~l~~-~~~~~~~~~~l~~~Gv~v~~----~------~~~lRi~p~~~----~t~eei~~~l~~L~~  448 (457)
T 3tfu_A          386 TDVRV--CGAIGVIECDR-PVDLAVATPAALDRGVWLRP----F------RNLVYAMPPYI----CTPAEITQITSAMVE  448 (457)
T ss_dssp             EEEEE--CSSCEEEEESS-CCCHHHHHHHHHHTTEECCC----B------TTEEEECCCTT----CCHHHHHHHHHHHHH
T ss_pred             eeeec--CCeEEEEEECC-cccHHHHHHHHHHCCeEEEe----c------CCEEEEECCCC----CCHHHHHHHHHHHHH
Confidence            22222  23455666643 34567788888888999842    1      36899986644    458999999999999


Q ss_pred             HHHH
Q 009673          476 GVEI  479 (529)
Q Consensus       476 ~~~~  479 (529)
                      ++..
T Consensus       449 ~l~~  452 (457)
T 3tfu_A          449 VARL  452 (457)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8864

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=99.78  E-value=2e-16  Score=168.05  Aligned_cols=330  Identities=12%  Similarity=0.016  Sum_probs=186.1

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK---  190 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~---  190 (529)
                      .+|.|++|+...+.+. ...+....  ...+...    ...++++++++.+.+.   .+..++|++|+..++.++..   
T Consensus        68 ~~p~v~~A~~~~~~~~-~~~~~~~~--~~~~~~~----~la~~l~~~~~~~~~~---v~~~~gGseA~~~al~~~~~~~~  137 (460)
T 3gju_A           68 GRQKIADAIATQAKNL-AYYHAYVG--HGTEASI----TLAKMIIDRAPKGMSR---VYFGLSGSDANETNIKLIWYYNN  137 (460)
T ss_dssp             CCHHHHHHHHHHHHHH-SCCCCCTT--CCCHHHH----HHHHHHHHHSCTTEEE---EEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhc-cccccccc--cCCHHHH----HHHHHHHhhCCCCcCE---EEEeCchHHHHHHHHHHHHHHHH
Confidence            4799999988776432 11121111  1122222    3347788888766542   24456677999999988763   


Q ss_pred             -----CCCEEEEcCCCCCccccc-----cccccccccccccceEEEEEccc--CCCCCCCC--------HHHHHHHhhh-
Q 009673          191 -----PHDRIMGLDLPHGGHLSH-----GFMTPKRRVSGTSIYFESMPYRL--DESTGLVD--------YDMLEKTAIL-  249 (529)
Q Consensus       191 -----pGD~Vl~~~~~~~g~~s~-----g~~~~~~~i~~~g~~~~~v~~~v--~~~~~~iD--------~d~le~~i~~-  249 (529)
                           ++|+|++.++.|.|....     +...+..........+..++++.  ...+...|        +++|+++++. 
T Consensus       138 ~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~  217 (460)
T 3gju_A          138 VLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAE  217 (460)
T ss_dssp             HTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhc
Confidence                 569999999876443210     00000000111111223344332  11111223        6889988873 


Q ss_pred             --cCCcEEEEcCCCCCC--CCC----HHHHHHHHHHhCCEEEEecccccccccccccC-CC-CC-cccEEEecccccccC
Q 009673          250 --FRPKLIIAGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DP-FK-YCDVVTTTTHKSLRG  318 (529)
Q Consensus       250 --~~pklIi~~~s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~-~~-~~-~aDiv~~S~hK~l~G  318 (529)
                        .++++|+++.+++++  ..+    +++|+++|++||++||+|++|. |+...+... .. .. ..|+++  ++|+|+|
T Consensus       218 ~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~~~~pdi~t--~sK~l~g  294 (460)
T 3gju_A          218 GPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVT-GFGRLGTMFGSDHYGIKPDLIT--IAKGLTS  294 (460)
T ss_dssp             CGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSCHHHHHTCCCSEEE--ECGGGTT
T ss_pred             CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcccccchHhhcCCCCCeee--eehhhcC
Confidence              356788887554443  333    8999999999999999999965 432222100 00 01 246765  4599976


Q ss_pred             --CCCeEEEeeCCCcchhHHHhhhcc------c-ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Q 009673          319 --PRGGMIFFKKDPVLGVELESAINN------A-VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR  389 (529)
Q Consensus       319 --prgG~i~~~~~~~~~~~l~~~i~~------~-~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~  389 (529)
                        +|.|++++++      ++.+.+..      . ......+++.. ..++..++|+.+..+   ++.+++.++.+++.+.
T Consensus       295 G~~~lg~v~~~~------~i~~~~~~~~~~~~~~~~~~t~~~~~~-~~aaa~aal~~~~~~---~~~~~~~~~~~~~~~~  364 (460)
T 3gju_A          295 AYAPLSGVIVAD------RVWQVLVQGSDKLGSLGHGWTYSAHPI-CVAAGVANLELIDEM---DLVTNAGETGAYFRAE  364 (460)
T ss_dssp             TSSCCEEEEEEH------HHHHHHHHHHHHHCSCSCCCTTTTCHH-HHHHHHHHHHHHHHT---THHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEECH------HHHHHHhcccccccccccCCCCCCCHH-HHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHH
Confidence              7899999988      67776642      1 11222333333 333334467654332   3345555555556665


Q ss_pred             HHh----cC-cEEecCCCCCceEEEccCCCC----------CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccC
Q 009673          390 LVE----LG-YKLVSGGSDNHLVLVDLRPMG----------IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSP  454 (529)
Q Consensus       390 L~~----~G-~~v~~~gt~~~~~~v~~~~~~----------i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~  454 (529)
                      |.+    .+ +..+.+  ...++++++....          .....+.+.|.+.||.+..    +.    ..+.|||+.+
T Consensus       365 l~~~l~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~~----~~~~iRi~~~  434 (460)
T 3gju_A          365 LAKAVGGHKNVGEVRG--DGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRA----MP----QGDILGFAPP  434 (460)
T ss_dssp             HHHHHTTSTTEEEEEE--ETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEE----CS----SSCEEEECCC
T ss_pred             HHHHHhcCCCeEEEee--eeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEec----CC----CCCEEEEECC
Confidence            533    22 222222  1234445443211          0134677778888998853    21    2478999866


Q ss_pred             CCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          455 AMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       455 ~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      ..    .+++|++++++.|+++++..
T Consensus       435 ~~----~t~e~i~~~l~~l~~~l~~~  456 (460)
T 3gju_A          435 LC----LTREQADIVVSKTADAVKSV  456 (460)
T ss_dssp             TT----CCHHHHHHHHHHHHHHHHHH
T ss_pred             CC----CCHHHHHHHHHHHHHHHHHH
Confidence            44    45899999999999988643

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.78  E-value=1.2e-16  Score=168.08  Aligned_cols=313  Identities=13%  Similarity=0.080  Sum_probs=183.2

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC--C
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--P  191 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--p  191 (529)
                      .+|.|.+|+...+......+|+       .+...++    ++++++.++ ..+.   .+..+||++|+..++..+..  +
T Consensus        72 ~~p~v~~a~~~~~~~~~~~~~~-------~~~~~~l----~~~la~~~~-~~~~---v~~~~sGsea~~~ai~~a~~~~~  136 (434)
T 3l44_A           72 AHPHITKAITTAAENGVLYGTP-------TALEVKF----AKMLKEAMP-ALDK---VRFVNSGTEAVMTTIRVARAYTG  136 (434)
T ss_dssp             TCHHHHHHHHHHHHHCSCCSSC-------CHHHHHH----HHHHHHHCT-TCSE---EEEESSHHHHHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHhCcCCCCC-------CHHHHHH----HHHHHHhCC-CCCE---EEEeCchHHHHHHHHHHHHHhhC
Confidence            4899999998877543222222       2222233    367788886 3332   24456788999999887654  7


Q ss_pred             CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCC-------------CCHHHHHHHhhhc--CCcEEE
Q 009673          192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL-------------VDYDMLEKTAILF--RPKLII  256 (529)
Q Consensus       192 GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~-------------iD~d~le~~i~~~--~pklIi  256 (529)
                      +|+|++.++.|.+....       .....|.......++.  ..+.             .|+++|++++++.  ++++|+
T Consensus       137 ~~~vi~~~~~yhg~~~~-------~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi  207 (434)
T 3l44_A          137 RTKIMKFAGCYHGHSDL-------VLVAAGSGPSTLGTPD--SAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAIL  207 (434)
T ss_dssp             CCEEEEETTCCCCSSGG-------GGBC-------CCCBS--STTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEE
T ss_pred             CCEEEEEcCccCCCcHH-------HHhhcCCcccccCCCC--cCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEE
Confidence            89999998876443211       1111121001001110  0011             2899999998742  466777


Q ss_pred             EcCCCCCC--CCC----HHHHHHHHHHhCCEEEEecccccccccccccC-C-CCC-cccEEEecccccc-cCCCCeEEEe
Q 009673          257 AGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA-D-PFK-YCDVVTTTTHKSL-RGPRGGMIFF  326 (529)
Q Consensus       257 ~~~s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~-~-~~~-~aDiv~~S~hK~l-~GprgG~i~~  326 (529)
                      ++.+++++  ..+    +++|+++|++||++||+|++|. |+ ..+... . .+. ..|+++  ++|++ +|+|.|++++
T Consensus       208 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~-g~-~~g~~~~~~~~~~~~di~t--~sK~~~~G~~iG~~~~  283 (434)
T 3l44_A          208 VEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVIT-AF-RFMYGGAQDLLGVTPDLTA--LGKVIGGGLPIGAYGG  283 (434)
T ss_dssp             ECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTT-TT-TSSSSCHHHHHTCCCSEEE--EEGGGGTTSSCEEEEE
T ss_pred             EcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-ce-eccccHHHHHcCCCCCeee--hhhhhcCCcCeeeEEE
Confidence            77554433  455    9999999999999999999964 44 222110 0 001 246654  56988 5678899988


Q ss_pred             eCCCcchhHHHhhhccc--cc-CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cCcEEec
Q 009673          327 KKDPVLGVELESAINNA--VF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLVS  399 (529)
Q Consensus       327 ~~~~~~~~~l~~~i~~~--~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~~v~~  399 (529)
                      ++      ++.+.+...  .+ .+..++ +....++..++++.+..   +++.+++.++.+++.+.|++    .++....
T Consensus       284 ~~------~i~~~~~~~~~~~~~~t~~~-~~~a~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~  353 (434)
T 3l44_A          284 KK------EIMEQVAPLGPAYQAGTMAG-NPASMASGIACLEVLQQ---EGLYEKLDELGATLEKGILEQAAKHNIDITL  353 (434)
T ss_dssp             CH------HHHTTBTTTSSBCCCCTTTT-CHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             cH------HHHHhhccCCCcccCCCCCc-CHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence            87      777776542  11 112223 33344444456776543   34556667777777777765    2432111


Q ss_pred             CCCCCceEEEccCCCCC------------cHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673          400 GGSDNHLVLVDLRPMGI------------DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV  467 (529)
Q Consensus       400 ~gt~~~~~~v~~~~~~i------------~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~  467 (529)
                      .+ ...++++.+....+            ....+.+.|.+.||.+..    +     ....+|+++      ..+++|++
T Consensus       354 ~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~-----~~~~~rl~~------~~t~e~i~  417 (434)
T 3l44_A          354 NR-LKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAP----S-----KYEAWFLTT------EHTKEDIE  417 (434)
T ss_dssp             EE-ETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCS----S-----TTCCEECCT------TCCHHHHH
T ss_pred             Ee-eccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEee----c-----CCCcEEEec------ccCHHHHH
Confidence            11 23455555432211            124567778788999843    2     135688852      25689999


Q ss_pred             HHHHHHHHHHHHH
Q 009673          468 AIADFIHEGVEIT  480 (529)
Q Consensus       468 ~la~~i~~~~~~~  480 (529)
                      ++++.|++++...
T Consensus       418 ~~l~~l~~~l~~~  430 (434)
T 3l44_A          418 YTIEAVGRAFAAL  430 (434)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988643

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=99.77  E-value=8.5e-19  Score=184.70  Aligned_cols=322  Identities=10%  Similarity=0.026  Sum_probs=200.1

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhc-cCC-CCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCC
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTN-KYS-EGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLS  176 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~-~y~-~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V~~~s  176 (529)
                      ..|+|..+++.  .++.+++++...+.. ... .+|+...  .|.....++++...+++.+..+.  +++    +|.+++
T Consensus        57 ~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~--~G~~~~~~lr~aia~~~~~~~~~~~~~~----~iv~t~  130 (427)
T 2hox_A           57 CSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNP--VSNFISFELEKTIKELHEVVGNAAAKDR----YIVFGV  130 (427)
T ss_dssp             CCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSS--CCTTCCHHHHHHHHHHHHHHTCBCCTTC----EEEEES
T ss_pred             ceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCC--CCccchHHHHHHHHHHHHHhCCcCCCCC----EEEEeC
Confidence            45778777764  346777787766531 111 1243311  02112456776666666655443  343    566688


Q ss_pred             hH-HHHHHHHHhh--------cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHh
Q 009673          177 GS-PANFEVYTAI--------LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTA  247 (529)
Q Consensus       177 Gs-~A~~~~l~al--------l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i  247 (529)
                      |+ +++..++.++        ++|||+|++++|.|.++..        .+...|.  +++.       +.+|+++|++.+
T Consensus       131 G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~-------~~~d~~~l~~~~  193 (427)
T 2hox_A          131 GVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFRE--------QTKYFDK--KGYV-------WAGNAANYVNVS  193 (427)
T ss_dssp             HHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHH--------HHHHSCB--TTEE-------EEEEGGGGTTCS
T ss_pred             CHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHH--------HHHHcCC--eeee-------ecCCHHHHHHhh
Confidence            77 9999999999        9999999999998754321        2233343  2222       345677888877


Q ss_pred             hhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCC-CcccEEEecccccc--cCCCCe
Q 009673          248 ILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-KYCDVVTTTTHKSL--RGPRGG  322 (529)
Q Consensus       248 ~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-~~aDiv~~S~hK~l--~GprgG  322 (529)
                      ++ ++|+|++++|+||+  ..+ +    +++  ++..+.|.+++....  .  ...+ ...+++++|+||++  +|.|.|
T Consensus       194 ~~-~~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~~~~--s--~~~~~~~~~i~~~S~SK~~g~~G~RiG  261 (427)
T 2hox_A          194 NP-EQYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYWPHY--T--PIKYKADEDILLFTMSKFTGHSGSRFG  261 (427)
T ss_dssp             CG-GGEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCSTTT--S--CCCSCBCCSEEEEEHHHHTSCGGGCCE
T ss_pred             cC-CceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccCCCC--C--ccccCCCceEEEEeChhcCCCCCceEE
Confidence            76 78999999999997  555 3    333  677888887542110  0  0111 24679999999986  688999


Q ss_pred             EEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc----------CchHHHHHHHHHHHHHHHHHHHHh
Q 009673          323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ----------SPEFKVYQNKVVSNCRALASRLVE  392 (529)
Q Consensus       323 ~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~----------~~~~~~~~~~i~~~a~~l~~~L~~  392 (529)
                      |++++++     ++.+.+.........+.+...+.++ ..+|+...          ...++..++++.++++.+.+.|++
T Consensus       262 ~~~~~~~-----~l~~~l~~~~~~~~~~~~~~~q~a~-~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~  335 (427)
T 2hox_A          262 WALIKDE-----SVYNNLLNYMTKNTEGTPRETQLRS-LKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQ  335 (427)
T ss_dssp             EEEECCH-----HHHHHHHHHHHHHTSSCCHHHHHHH-HHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEECCH-----HHHHHHHHHHHhcCCCCCHHHHHHH-HHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999532     6777665543222234444444443 33554321          223356677888899999999988


Q ss_pred             c-CcEE--ec-C----------CCCCceEEEccCCCCCcHHH-HHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCc
Q 009673          393 L-GYKL--VS-G----------GSDNHLVLVDLRPMGIDGAR-VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMT  457 (529)
Q Consensus       393 ~-G~~v--~~-~----------gt~~~~~~v~~~~~~i~~~~-~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~t  457 (529)
                      . |+.+  +. +          .....++|+++..   +..+ +..+|+++||.+..+...+   . .+++|||++.   
T Consensus       336 ~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~---~~~~~~~~ll~~~gI~v~pg~~f~---~-~~~~~Ris~~---  405 (427)
T 2hox_A          336 SDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW---EEDKDCYQTFQNGRINTQNGVGFE---A-SSRYVRLSLI---  405 (427)
T ss_dssp             SSSEECCCCCSCEEETTTTEEECCCCSEEEEEECS---GGGCSHHHHHHHTTEECEEGGGGT---S-CTTEEEEECS---
T ss_pred             CcCccccccccccccccccccCCCCceEEEEECCC---cHHHHHHHHHHHCCEEEcCCCccC---C-CCCEEEEEec---
Confidence            5 7765  21 1          1124567777753   2333 4555678999995543221   1 4678999974   


Q ss_pred             cCCCCHHHHHHHHHHHHHHHH
Q 009673          458 TRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       458 t~g~~~~d~~~la~~i~~~~~  478 (529)
                         .+++++++..+.|.+++.
T Consensus       406 ---~~~e~l~~~l~~l~~~~~  423 (427)
T 2hox_A          406 ---KTQDDFDQLMYYLKDMVK  423 (427)
T ss_dssp             ---SCHHHHHHHHHHHHHHHT
T ss_pred             ---CCHHHHHHHHHHHHHHHh
Confidence               257889999988887763

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=99.77  E-value=1.2e-16  Score=169.80  Aligned_cols=327  Identities=11%  Similarity=0.014  Sum_probs=185.1

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK---  190 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~---  190 (529)
                      .+|.|++|+...+.+. ..++...++  ..+..    ....++++++++.+.+.   .+..++|++|+..++.++.+   
T Consensus        67 ~~p~v~~A~~~~~~~~-~~~~~~~~~--~~~~~----~~la~~l~~~~~~~~~~---v~~~~ggseA~~~al~~~~~~~~  136 (459)
T 4a6r_A           67 GRKDFAEAARRQMEEL-PFYNTFFKT--THPAV----VELSSLLAEVTPAGFDR---VFYTNSGSESVDTMIRMVRRYWD  136 (459)
T ss_dssp             CCHHHHHHHHHHHHHC-SCCCTTSSS--CCHHH----HHHHHHHHHHSCTTCCE---EEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhc-ccccccccc--CCHHH----HHHHHHHHHhCCCCCCE---EEEeCchHHHHHHHHHHHHHHHH
Confidence            4799999998877532 112221111  12222    23447888898876653   24456677999999988865   


Q ss_pred             -----CCCEEEEcCCCCCccccc-----cccccccccccccceEEEEEccc--CCCCCCCC--------HHHHHHHhhh-
Q 009673          191 -----PHDRIMGLDLPHGGHLSH-----GFMTPKRRVSGTSIYFESMPYRL--DESTGLVD--------YDMLEKTAIL-  249 (529)
Q Consensus       191 -----pGD~Vl~~~~~~~g~~s~-----g~~~~~~~i~~~g~~~~~v~~~v--~~~~~~iD--------~d~le~~i~~-  249 (529)
                           ++|+|++.++.|.|....     +...++.........+..++++.  +...+ .|        +++|+++++. 
T Consensus       137 ~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~  215 (459)
T 4a6r_A          137 VQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEI  215 (459)
T ss_dssp             HTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHH
T ss_pred             hcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHc
Confidence                 579999999876443210     00000000000111123334322  10112 45        7889988874 


Q ss_pred             --cCCcEEEEcCCCCCC--CCC----HHHHHHHHHHhCCEEEEecccccccccccccC-CC-CC-cccEEEecccccccC
Q 009673          250 --FRPKLIIAGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DP-FK-YCDVVTTTTHKSLRG  318 (529)
Q Consensus       250 --~~pklIi~~~s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~-~~-~~-~aDiv~~S~hK~l~G  318 (529)
                        .++++|+++..++++  ..+    +++|+++|++||++||+|++|. |+...+... .. .. ..|++++  +|+|+|
T Consensus       216 ~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~G~~~~~~~~~~~pdi~t~--sK~l~g  292 (459)
T 4a6r_A          216 GADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVIC-GFGRTGEWFGHQHFGFQPDLFTA--AKGLSS  292 (459)
T ss_dssp             CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEEE--CGGGGT
T ss_pred             CCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcccccchHhhcCCCCCeeeh--hhhhcC
Confidence              255677776443332  344    8999999999999999999964 432222100 00 01 3577754  599865


Q ss_pred             --CCCeEEEeeCCCcchhHHHhhhcc---cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHH-HHHHHHHHHH-H
Q 009673          319 --PRGGMIFFKKDPVLGVELESAINN---AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV-SNCRALASRL-V  391 (529)
Q Consensus       319 --prgG~i~~~~~~~~~~~l~~~i~~---~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~-~~a~~l~~~L-~  391 (529)
                        +|.|++++++      ++.+.+..   ....+..+++.....++ .++|+.+..+   ++.+++. ++.+++.+.| +
T Consensus       293 g~~~lg~v~~~~------~i~~~~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~~---~~~~~~~~~~~~~~~~~l~~  362 (459)
T 4a6r_A          293 GYLPIGAVFVGK------RVAEGLIAGGDFNHGFTYSGHPVCAAVA-HANVAALRDE---GIVQRVKDDIGPYMQKRWRE  362 (459)
T ss_dssp             TSSCCEEEEECH------HHHHHHHHHCTTHHHHHHCSCHHHHHHH-HHHHHHHHHT---CHHHHHHHTHHHHHHHHHHH
T ss_pred             CCCCccceeeCH------HHHHHhhcCCCcccCCCCCCCHHHHHHH-HHHHHHHhcc---hHHHHHHHHHHHHHHHHHHH
Confidence              7889999987      67666652   11111123333333333 3467654322   3345555 5566666666 3


Q ss_pred             h---c-CcEEecCCCCCceEEEccCCCCC----------cHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCc
Q 009673          392 E---L-GYKLVSGGSDNHLVLVDLRPMGI----------DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMT  457 (529)
Q Consensus       392 ~---~-G~~v~~~gt~~~~~~v~~~~~~i----------~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~t  457 (529)
                      .   . ++..+.+  ...++.+++.....          ....+.+.|.+.||.+..    +      .+.|||+.+.. 
T Consensus       363 ~l~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~------g~~iRi~~~~~-  429 (459)
T 4a6r_A          363 TFSRFEHVDDVRG--VGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRA----C------GDHIVSAPPLV-  429 (459)
T ss_dssp             HHTTCTTEEEEEE--ETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEE----E------TTEEEECCCTT-
T ss_pred             HHhcCCCeEEEEE--EEEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEec----C------CCEEEEECCCC-
Confidence            3   2 2222222  12344454432110          145577777788999843    2      16899986654 


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHH
Q 009673          458 TRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       458 t~g~~~~d~~~la~~i~~~~~~~  480 (529)
                         .+++|++++++.|++++...
T Consensus       430 ---~t~e~i~~~l~~l~~~l~~~  449 (459)
T 4a6r_A          430 ---MTRAEVDEMLAVAERCLEEF  449 (459)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHH
T ss_pred             ---CCHHHHHHHHHHHHHHHHHH
Confidence               45899999999999988754

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=99.76  E-value=4.6e-16  Score=166.06  Aligned_cols=327  Identities=11%  Similarity=-0.005  Sum_probs=191.3

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK---  190 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~---  190 (529)
                      .+|.|.+|+...+.. +..+++.   ....+...+    ..++++++++.+.+.   .+..+||++|+..++..+..   
T Consensus        71 ~~p~v~~A~~~~l~~-~~~~~~~---~~~~~~~~~----la~~l~~~~~~~~~~---v~~~~sGseA~~~Aik~a~~~~~  139 (476)
T 3i5t_A           71 GRREIVDAMAHQAMV-LPYASPW---YMATSPAAR----LAEKIATLTPGDLNR---IFFTTGGSTAVDSALRFSEFYNN  139 (476)
T ss_dssp             CCHHHHHHHHHHHHH-CCCCCTT---TCBCHHHHH----HHHHHHTTSSTTCCE---EEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHh-ccCcccC---ccCCHHHHH----HHHHHHhcCCCCcCE---EEEeCchHHHHHHHHHHHHHHHH
Confidence            589999999887753 3222221   111232333    347888888765542   24457788999999988753   


Q ss_pred             -----CCCEEEEcCCCCCccccc-----cccccccccccccceEEEEEcccCCCCCCCC--------HHHHHHHhhh---
Q 009673          191 -----PHDRIMGLDLPHGGHLSH-----GFMTPKRRVSGTSIYFESMPYRLDESTGLVD--------YDMLEKTAIL---  249 (529)
Q Consensus       191 -----pGD~Vl~~~~~~~g~~s~-----g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD--------~d~le~~i~~---  249 (529)
                           .+++|++.++.|.|....     +...++.........+..++++.....+..|        +++|+++++.   
T Consensus       140 ~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~  219 (476)
T 3i5t_A          140 VLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGP  219 (476)
T ss_dssp             HTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCG
T ss_pred             hcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCC
Confidence                 367999998876443210     0000000000001112333333211111222        7889988874   


Q ss_pred             cCCcEEEEcCCCCCC--CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-C-C-CCC-cccEEEecccccccC-
Q 009673          250 FRPKLIIAGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-D-PFK-YCDVVTTTTHKSLRG-  318 (529)
Q Consensus       250 ~~pklIi~~~s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~-~~~-~aDiv~~S~hK~l~G-  318 (529)
                      .++++|+++.+++++  ..+    +++|+++|++||++||+|++|. |+...|.. . . .+. ..|++++  +|+++| 
T Consensus       220 ~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~-g~gr~G~~~~~~~~~~v~pdi~t~--sK~l~~G  296 (476)
T 3i5t_A          220 DTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVT-GFGRCGEWFASEKVFGVVPDIITF--AKGVTSG  296 (476)
T ss_dssp             GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSCHHHHTTCCCCSEEEE--CGGGGTT
T ss_pred             CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccccCceeeecccCCCcchhhh--hhhhcCC
Confidence            256788887554432  333    8999999999999999999964 44222211 0 0 111 3577764  599854 


Q ss_pred             -CCCeEEEeeCCCcchhHHHhhhccc-------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 009673          319 -PRGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL  390 (529)
Q Consensus       319 -prgG~i~~~~~~~~~~~l~~~i~~~-------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L  390 (529)
                       ++.|++++++      ++.+.+...       ...+..+++.. ..+|..++|+.+..   +++.+++.++.+++.+.|
T Consensus       297 ~~plg~v~~~~------~i~~~~~~~~~~~~~~~~~~t~~~np~-a~aAa~aaL~~~~~---~~~~~~~~~~~~~l~~~L  366 (476)
T 3i5t_A          297 YVPLGGLAISE------AVLARISGENAKGSWFTNGYTYSNQPV-ACAAALANIELMER---EGIVDQAREMADYFAAAL  366 (476)
T ss_dssp             SSCCEEEEECH------HHHHTTSGGGCTTCEECCCCTTTTCHH-HHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHH
T ss_pred             CcCeEEEEECH------HHHHHHhcCCcccccccccCCCCcCHH-HHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHH
Confidence             7889999987      787777542       11223333333 34443446765533   245677777888888888


Q ss_pred             HhcC----cEEecCCCCCceEEEccCCCCC----------cHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCC
Q 009673          391 VELG----YKLVSGGSDNHLVLVDLRPMGI----------DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAM  456 (529)
Q Consensus       391 ~~~G----~~v~~~gt~~~~~~v~~~~~~i----------~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~  456 (529)
                      ++.+    +..+.+  ...++.+++.....          ....+.+.|.+.||.+...          .+.|||+.+..
T Consensus       367 ~~l~~~~~v~~v~~--~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----------g~~iRi~p~l~  434 (476)
T 3i5t_A          367 ASLRDLPGVAETRS--VGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPL----------GDLCVISPPLI  434 (476)
T ss_dssp             HTTTTSTTEEEEEE--ETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEE----------TTEEEECCCTT
T ss_pred             HHHhcCCCeEEEEe--cCceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEec----------CCEEEEECCCC
Confidence            7632    222221  12344555543211          1345667777889998431          26899986643


Q ss_pred             ccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          457 TTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       457 tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                          .+++|++++++.|++++...
T Consensus       435 ----~t~e~i~~~l~~l~~~l~~~  454 (476)
T 3i5t_A          435 ----ISRAQIDEMVAIMRQAITEV  454 (476)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHH
T ss_pred             ----CCHHHHHHHHHHHHHHHHHH
Confidence                45899999999999998754

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=99.76  E-value=3.3e-19  Score=186.54  Aligned_cols=236  Identities=9%  Similarity=0.060  Sum_probs=149.2

Q ss_pred             hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC----CCCEEEEcCCCCCcccccccccccccccc
Q 009673          144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK----PHDRIMGLDLPHGGHLSHGFMTPKRRVSG  219 (529)
Q Consensus       144 ~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~----pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~  219 (529)
                      +..-.+|+....|+.+++|++... . -+.++.+|.++.+++++.++    +||.|+++.-.|.+.+        +++.+
T Consensus        94 ~~~~~~e~~~~~~~~~~lGlp~~~-~-~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~--------kAl~l  163 (450)
T 3bc8_A           94 SLLNKITNSLVLNVIKLAGVHSVA-S-CFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCF--------KSMVT  163 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCTTCC-E-EEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHH--------HHHHH
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCc-e-EEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHH--------HHHHH
Confidence            345577878889999999998642 1 13334454344434444433    3899998876554332        35566


Q ss_pred             ccceEEEEEcccCCCCCCCCHHHHHHHhhhcC--CcEEE-EcCCCCC--CCCCHHHHHHHHHHhCCEEEEeccccccccc
Q 009673          220 TSIYFESMPYRLDESTGLVDYDMLEKTAILFR--PKLII-AGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVA  294 (529)
Q Consensus       220 ~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~--pklIi-~~~s~~p--~~~d~~~i~~ia~~~g~~livD~ah~~Gli~  294 (529)
                      .|.....+....+.+.+.+|+++|+++|+++.  .++++ .+.+.|+  ...|+++|+++|++||+||++|+||......
T Consensus       164 ~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~  243 (450)
T 3bc8_A          164 AGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSK  243 (450)
T ss_dssp             TTCEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHH
T ss_pred             cCCeeEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhh
Confidence            77643333322223457899999999998753  23444 4444554  3789999999999999999999998754332


Q ss_pred             ccccC-CCC--CcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCC-CChHHHHHHHHHHHHHhcC
Q 009673          295 ASVVA-DPF--KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQG-GPHNHTIGGLAVCLKHAQS  369 (529)
Q Consensus       295 ~~~~~-~~~--~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g-~p~~~~iaala~al~~~~~  369 (529)
                      ....+ ..+  +++|+++.|+|||+..|-+ ++++++++     ++.+++... +++.+. +|.    ..++..+.....
T Consensus       244 ~~~l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~-----~~~~~~~~~-~~g~~s~Sps----L~l~~~l~~~G~  313 (450)
T 3bc8_A          244 CMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNE-----PFIQDISKM-YPGRASASPS----LDVLITLLSLGC  313 (450)
T ss_dssp             HHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCH-----HHHHHHHHH-SCSCBCSHHH----HHHHHHHHHHHH
T ss_pred             hHhHHHHHhcccCCCEEEECCccCCCchhccEEEEecCH-----HHHHHHHHH-hhcCCcccHH----HHHHHHHHHHHH
Confidence            11111 122  4699999999999988877 66666653     555555432 344332 222    223334433334


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHh-c---CcEEec
Q 009673          370 PEFKVYQNKVVSNCRALASRLVE-L---GYKLVS  399 (529)
Q Consensus       370 ~~~~~~~~~i~~~a~~l~~~L~~-~---G~~v~~  399 (529)
                      .+|.+..++..++++++++.|++ .   |+.++.
T Consensus       314 ~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~  347 (450)
T 3bc8_A          314 SGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQ  347 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecC
Confidence            45677777778889999999876 3   777664

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=99.76  E-value=2.3e-16  Score=166.89  Aligned_cols=319  Identities=12%  Similarity=0.036  Sum_probs=180.2

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK---  190 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~---  190 (529)
                      .+|.|.+|+...+... ..+++   .....+...+    ..++++++++...+.   .+..+||++|+..++.++..   
T Consensus        61 ~~p~v~~A~~~~~~~~-~~~~~---~~~~~~~~~~----la~~l~~~~~~~~~~---v~~~~sGseA~~~al~~~~~~~~  129 (448)
T 3dod_A           61 RKKELDDAIKKQLGKI-AHSTL---LGMTNVPATQ----LAETLIDISPKKLTR---VFYSDSGAEAMEIALKMAFQYWK  129 (448)
T ss_dssp             SCHHHHHHHHHHHTTC-SCCCC---SSSEEHHHHH----HHHHHHHHSCTTEEE---EEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhc-cCccc---cccCCHHHHH----HHHHHHHhCCCCCCE---EEEeCchHHHHHHHHHHHHHHHH
Confidence            4799999998877432 21111   1111232233    347888888655432   24456788999999988765   


Q ss_pred             -CC----CEEEEcCCCCCccccccccccccccccccce----------EEEEEcccCCCCCC-----------CCHHHHH
Q 009673          191 -PH----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY----------FESMPYRLDESTGL-----------VDYDMLE  244 (529)
Q Consensus       191 -pG----D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~----------~~~v~~~v~~~~~~-----------iD~d~le  244 (529)
                       +|    |+|++.++.|.|....       .....+..          .....++.. +.+.           .|+++|+
T Consensus       130 ~~G~~~~~~vi~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le  201 (448)
T 3dod_A          130 NIGKPEKQKFIAMKNGYHGDTIG-------AVSVGSIELFHHVYGPLMFESYKAPIP-YVYRSESGDPDECRDQCLRELA  201 (448)
T ss_dssp             HTTCTTCCEEEEEC------------------------------------CEEECCC-CCTTSSSCCHHHHHHHHHHHHH
T ss_pred             hhCCCCCCEEEEECCCCCCccHH-------HHHhcCCccccccccCCCCCceEeCCC-ccccCCccchhhhhHHHHHHHH
Confidence             55    9999999876443211       11111110          011122221 1122           2589999


Q ss_pred             HHhh--hcCCcEEEEcCC--CCCC-CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-CCC-CC-cccEEEecc
Q 009673          245 KTAI--LFRPKLIIAGAS--AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADP-FK-YCDVVTTTT  312 (529)
Q Consensus       245 ~~i~--~~~pklIi~~~s--~~p~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~~-~~-~aDiv~~S~  312 (529)
                      ++++  ..++++|++...  ++++ ..+    +++|+++|++||++||+|++|. |+...+.. ... +. ..|+++  +
T Consensus       202 ~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~-g~g~~g~~~a~~~~~~~~di~t--~  278 (448)
T 3dod_A          202 QLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVAT-GFGRTGKMFACEHENVQPDLMA--A  278 (448)
T ss_dssp             HHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEE--E
T ss_pred             HHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEecccc-CCCcccchhhhhhcCCCCCEEE--e
Confidence            9987  225677777754  3333 333    8999999999999999999965 43222211 000 11 256765  5


Q ss_pred             ccccc-C-CCCeEEEeeCCCcchhHHHhhhcc-------cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673          313 HKSLR-G-PRGGMIFFKKDPVLGVELESAINN-------AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC  383 (529)
Q Consensus       313 hK~l~-G-prgG~i~~~~~~~~~~~l~~~i~~-------~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a  383 (529)
                      +|++. | .|.|++++++      ++.+.+..       ....+..+++.. ..++..++|+.+..+   ++.+++.++.
T Consensus       279 sK~l~~G~~~ig~v~~~~------~~~~~~~~~~~~~~~~~~~~t~~~~~~-~~aaa~aal~~~~~~---~~~~~~~~~~  348 (448)
T 3dod_A          279 GKGITGGYLPIAVTFATE------DIYKAFYDDYENLKTFFHGHSYTGNQL-GCAVALENLALFESE---NIVEQVAEKS  348 (448)
T ss_dssp             CGGGGTTSSCCEEEEEEH------HHHHTTCSCGGGCCCCCCCCTTTTCHH-HHHHHHHHHHHHHHT---THHHHHHHHH
T ss_pred             cccccCCcCceEEEEECH------HHHHHhhhccccCCcccccCCCCcCHH-HHHHHHHHHHHHhcc---cHHHHHHHHH
Confidence            59984 5 3889999998      78777754       222222333333 334434467654322   3455666666


Q ss_pred             HHHHHHHHhc-Cc---EEecCCCCCceEEEccCCCCCc----------HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeE
Q 009673          384 RALASRLVEL-GY---KLVSGGSDNHLVLVDLRPMGID----------GARVEKILDMASITLNKNSVPGDKSALVPGGI  449 (529)
Q Consensus       384 ~~l~~~L~~~-G~---~v~~~gt~~~~~~v~~~~~~i~----------~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~i  449 (529)
                      +++.+.|.+. ++   ..+.+  ...++++++.....+          ...+.+.|.+.||.+.    |+      .+.|
T Consensus       349 ~~~~~~l~~l~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~------~~~i  416 (448)
T 3dod_A          349 KKLHFLLQDLHALPHVGDIRQ--LGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTR----PL------GDVI  416 (448)
T ss_dssp             HHHHHHHHHHTTSTTEEEEEE--ETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECC----EE------TTEE
T ss_pred             HHHHHHHHHHhcCCCeEEEEe--eeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEe----cc------CCEE
Confidence            7777776651 22   22211  123555555321100          2567777778899983    32      2689


Q ss_pred             EEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          450 RIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       450 Rig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      ||+.+..    .+++|++++++.|++++...
T Consensus       417 Ri~~~~~----~t~e~i~~~l~~l~~~l~~~  443 (448)
T 3dod_A          417 AFLPPLA----STAEELSEMVAIMKQAIHEV  443 (448)
T ss_dssp             EECCCTT----CCHHHHHHHHHHHHHHHHHH
T ss_pred             EEECCCC----CCHHHHHHHHHHHHHHHHHH
Confidence            9976543    56899999999999988743

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=99.75  E-value=1.7e-15  Score=159.03  Aligned_cols=317  Identities=14%  Similarity=0.061  Sum_probs=184.2

Q ss_pred             ceeEecCC--C---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673          104 SLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS  178 (529)
Q Consensus       104 ~i~L~ase--n---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs  178 (529)
                      .|++..+-  +   ..+|.|.+|+...+......++       ..+...    ...++++++++ +.+.   .+..++|+
T Consensus        54 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-------~~~~~~----~la~~l~~~~~-~~~~---v~~~~ggs  118 (427)
T 3fq8_A           54 YIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFGA-------PCALEN----VLAEMVNDAVP-SIEM---VRFVNSGT  118 (427)
T ss_dssp             EEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSS-------CCHHHH----HHHHHHHHHST-TCSE---EEEESSHH
T ss_pred             EEECCCchhhhccCCCCHHHHHHHHHHHHhCCCcCC-------CCHHHH----HHHHHHHHhCC-CCCE---EEEeCCHH
Confidence            46665442  2   2589999999887753211111       122222    33477888887 4432   24456777


Q ss_pred             HHHHHHHHhh--cCCCCEEEEcCCCCCccccccccccccccccccceE-----------------EEEEcccCCCCCCCC
Q 009673          179 PANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF-----------------ESMPYRLDESTGLVD  239 (529)
Q Consensus       179 ~A~~~~l~al--l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~-----------------~~v~~~v~~~~~~iD  239 (529)
                      +|+..++...  ...+|+|++.++.+.|.....       ....+...                 .++.++.      -|
T Consensus       119 ea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d  185 (427)
T 3fq8_A          119 EACMAVLRIMRAYTGRDKIIKFEGCYHGHADMF-------LVKAGSGVATLGLPSSPGVPKKTTANTLTTPY------ND  185 (427)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGG-------CSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET------TC
T ss_pred             HHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHH-------HHhcCCcccccCCCCCCCCCCcccCceeecCC------CC
Confidence            9999888432  124578998887764432111       01111100                 0111111      18


Q ss_pred             HHHHHHHhhhc--CCcEEEEcCCCCCC--CCC----HHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEE
Q 009673          240 YDMLEKTAILF--RPKLIIAGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVV  308 (529)
Q Consensus       240 ~d~le~~i~~~--~pklIi~~~s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv  308 (529)
                      +++|+++++++  ++++|+++.+++++  ..+    +++|+++|++||++||+|++|. |+ ..+...  .... ..|++
T Consensus       186 ~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~-~~g~~~~~~~~~~~~di~  263 (427)
T 3fq8_A          186 LEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVIT-GF-RIAYGGVQEKFGVTPDLT  263 (427)
T ss_dssp             HHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-BT-TTBTTHHHHHTTCCCSEE
T ss_pred             HHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-cc-ccCcchhhHhcCCCCChh
Confidence            99999999764  56778887554332  555    9999999999999999999975 55 222110  0011 24665


Q ss_pred             Eecccccc-cCCCCeEEEeeCCCcchhHHHhhhcccc---cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673          309 TTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAV---FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR  384 (529)
Q Consensus       309 ~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~---~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~  384 (529)
                      +  ++|++ +|+|.|++++++      ++.+.+....   ..+..++ +...+++..++++.+..+   ++.+++.++.+
T Consensus       264 t--~sK~~~~G~~~G~~~~~~------~~~~~~~~~~~~~~~~t~~~-~~~~~aa~~aal~~~~~~---~~~~~~~~~~~  331 (427)
T 3fq8_A          264 T--LGKIIGGGLPVGAYGGKR------EIMQLVAPAGPMYQAGTLSG-NPLAMTAGIKTLELLRQP---GTYEYLDQITK  331 (427)
T ss_dssp             E--ECGGGGTTSSCEEEEECH------HHHTTBTTTSSBCCCCTTTT-CHHHHHHHHHHHHHHTST---THHHHHHHHHH
T ss_pred             h--hhhhhhCCcceEEEEEcH------HHHHhhccCCCccccCCCCc-CHHHHHHHHHHHHHHHhc---CHHHHHHHHHH
Confidence            4  55998 567889999987      7777765421   1111222 344444444567765443   44566677777


Q ss_pred             HHHHHHHh----cCcEEecCCCCCceEEEccCCCCCc------------HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCe
Q 009673          385 ALASRLVE----LGYKLVSGGSDNHLVLVDLRPMGID------------GARVEKILDMASITLNKNSVPGDKSALVPGG  448 (529)
Q Consensus       385 ~l~~~L~~----~G~~v~~~gt~~~~~~v~~~~~~i~------------~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~  448 (529)
                      .+.+.|.+    .++.....+ ...+.++.+....+.            ...+.+.|.+.||.+..    +.     ...
T Consensus       332 ~~~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~----~~-----~~r  401 (427)
T 3fq8_A          332 RLSDGLLAIAQETGHAACGGQ-VSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAP----SQ-----FEA  401 (427)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEE-ETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCS----ST-----TSC
T ss_pred             HHHHHHHHHHHhCCCCeEEEE-eeeEEEEEEecCccccccccccccHHHHHHHHHHHHHCCcEEec----CC-----CCC
Confidence            77777765    233221111 234555555432221            34577778888999843    21     124


Q ss_pred             EEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          449 IRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       449 iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +|++  .    ..+++|++++++.|+++++
T Consensus       402 ~~~~--~----~~t~e~i~~~l~~l~~~l~  425 (427)
T 3fq8_A          402 GFTS--L----AHTEEDIDATLAAARTVMS  425 (427)
T ss_dssp             EECC--T----TCCHHHHHHHHHHHHHHHH
T ss_pred             EEee--C----cCCHHHHHHHHHHHHHHHH
Confidence            5543  2    2568999999999998875

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=99.75  E-value=2e-16  Score=166.28  Aligned_cols=321  Identities=14%  Similarity=0.075  Sum_probs=186.4

Q ss_pred             cceeEecCC--C---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673          103 KSLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG  177 (529)
Q Consensus       103 ~~i~L~ase--n---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG  177 (529)
                      ..|++.++-  +   ..+|.|.+|+...+......+++       .+...++    +++++++++ ..+.   .+..+||
T Consensus        54 ~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~-------~~~~~~l----~~~la~~~~-~~~~---v~~~~~G  118 (429)
T 3k28_A           54 EYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAP-------TEIENKL----AKLVIERVP-SIEI---VRMVNSG  118 (429)
T ss_dssp             EEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCSSC-------CHHHHHH----HHHHHHHST-TCSE---EEEESSH
T ss_pred             EEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCcCCC-------CHHHHHH----HHHHHHhCC-CCCE---EEEeCCh
Confidence            345655432  2   25899999998877543221222       2222333    367778876 3332   2445678


Q ss_pred             HHHHHHHHHhhcC--CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCC-------------CCHHH
Q 009673          178 SPANFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL-------------VDYDM  242 (529)
Q Consensus       178 s~A~~~~l~all~--pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~-------------iD~d~  242 (529)
                      ++|+..++..+..  ++++|++.++.+.|....       .....|.......++.  ..+.             -|+++
T Consensus       119 sea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~-------~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~  189 (429)
T 3k28_A          119 TEATMSALRLARGYTGRNKILKFIGCYHGHGDS-------LLIKAGSGVATLGLPD--SPGVPEGVAKNTITVAYNDLES  189 (429)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGG-------GCSSCCTTC-----CC--CTTCCHHHHTTEEEEETTCHHH
T ss_pred             HHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHH-------HHHhcCCcccccCCCC--cCCCCCcccCceeecCCCCHHH
Confidence            8999999877653  678999988766433211       1111121111111110  0111             18999


Q ss_pred             HHHHhhhc--CCcEEEEcCCCCCC--CCC----HHHHHHHHHHhCCEEEEecccccccccccccC-C-CCC-cccEEEec
Q 009673          243 LEKTAILF--RPKLIIAGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA-D-PFK-YCDVVTTT  311 (529)
Q Consensus       243 le~~i~~~--~pklIi~~~s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~-~-~~~-~aDiv~~S  311 (529)
                      |+++++.+  ++++|+++..++.+  ..+    +++|+++|++||++||+|++| .|+ ..+... . .+. ..|+++  
T Consensus       190 le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~-~g~-~~g~~~~~~~~~~~~di~t--  265 (429)
T 3k28_A          190 VKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVM-TGF-RVAYNCGQGYYGVTPDLTC--  265 (429)
T ss_dssp             HHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTT-TTT-TSSTTHHHHHHTCCCSEEE--
T ss_pred             HHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-ccc-ccCcchHHHHhCCCCceeh--
Confidence            99998742  46677776544332  455    999999999999999999997 454 322110 0 001 246664  


Q ss_pred             ccccc-cCCCCeEEEeeCCCcchhHHHhhhcccc--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Q 009673          312 THKSL-RGPRGGMIFFKKDPVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALAS  388 (529)
Q Consensus       312 ~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~  388 (529)
                      ++|++ .|+|.|++++++      ++.+.+....  +.+...+.+....++..++++...    ++..+++.++++++.+
T Consensus       266 ~sK~~~~G~~iG~~~~~~------~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~----~~~~~~~~~~~~~l~~  335 (429)
T 3k28_A          266 LGKVIGGGLPVGAYGGKA------EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT----PESYVEFERKAEMLEA  335 (429)
T ss_dssp             ECGGGGTTSCCEEEEECH------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC----HHHHHHHHHHHHHHHH
T ss_pred             hhhhhcCCCCeEEEEEcH------HHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH
Confidence            56998 457889999987      7777665321  111111223334444444666432    5677888888888888


Q ss_pred             HHHhc----Cc-EEecCCCCCceEEEccCCCCC------------cHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEE
Q 009673          389 RLVEL----GY-KLVSGGSDNHLVLVDLRPMGI------------DGARVEKILDMASITLNKNSVPGDKSALVPGGIRI  451 (529)
Q Consensus       389 ~L~~~----G~-~v~~~gt~~~~~~v~~~~~~i------------~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRi  451 (529)
                      .|++.    ++ ..+.+  ...++++.+.....            ....+.+.|.+.||.+..    +     ..+.+|+
T Consensus       336 ~L~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~-----~~~~~r~  404 (429)
T 3k28_A          336 GLRKAAEKHGIPHHINR--AGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQGVFLPP----S-----QFEGLFL  404 (429)
T ss_dssp             HHHHHHHHTTCCCEEEE--ETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCS----S-----TTSCBCC
T ss_pred             HHHHHHhhCCCCEEEEe--eccEEEEEEecCCcccccccccccHHHHHHHHHHHHHCCeEEec----C-----CCCCEEE
Confidence            88762    22 11111  12344454432111            125566777789999843    2     2356787


Q ss_pred             ccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          452 GSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       452 g~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ++      ..+++|++++++.|++++.
T Consensus       405 ~~------~~t~e~i~~~l~~l~~~l~  425 (429)
T 3k28_A          405 ST------VHSDADIEATIAAAEIAMS  425 (429)
T ss_dssp             CT------TCCHHHHHHHHHHHHHHHH
T ss_pred             EC------CCCHHHHHHHHHHHHHHHH
Confidence            53      2568999999999998875

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=99.75  E-value=1.3e-16  Score=167.84  Aligned_cols=324  Identities=14%  Similarity=0.104  Sum_probs=188.8

Q ss_pred             ceeEecCC--C---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673          104 SLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS  178 (529)
Q Consensus       104 ~i~L~ase--n---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs  178 (529)
                      .|++..+.  +   +.++.|.+++...+.+....++       ..+...+    .+++++++++ ..+.   .+..+||+
T Consensus        58 ~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~-------~~~~~~~----l~~~la~~~~-~~~~---v~~~~sgs  122 (434)
T 2epj_A           58 IVDLVLAYGPLILGHKHPRVLEAVEEALARGWLYGA-------PGEAEVL----LAEKILGYVK-RGGM---IRFVNSGT  122 (434)
T ss_dssp             EEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSS-------CCHHHHH----HHHHHHHHHC-TTCE---EEEESSHH
T ss_pred             EEEcccchhcccCCCCCHHHHHHHHHHHHhCCCCCC-------CCHHHHH----HHHHHHHhCC-CCCE---EEEeCCHH
Confidence            46665543  2   2589999999888754321111       1222333    3477788884 2321   24457788


Q ss_pred             HHHHHHHHhh--cCCCCEEEEcCCCCCccccccccccccc------cccccce----EEEEEcccCCCCCCCCHHHHHHH
Q 009673          179 PANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRR------VSGTSIY----FESMPYRLDESTGLVDYDMLEKT  246 (529)
Q Consensus       179 ~A~~~~l~al--l~pGD~Vl~~~~~~~g~~s~g~~~~~~~------i~~~g~~----~~~v~~~v~~~~~~iD~d~le~~  246 (529)
                      +|+..++.+.  +.++|+|+++++.|.+............      ....|..    .+++.++.      .|+++|+++
T Consensus       123 eA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~------~d~~~le~~  196 (434)
T 2epj_A          123 EATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY------NDVEALERV  196 (434)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET------TCHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC------CCHHHHHHH
Confidence            9999988861  3356788888877644321100000000      0001110    01222221      389999999


Q ss_pred             hhh--cCCcEEEEcCCCCC-C-CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEeccccc
Q 009673          247 AIL--FRPKLIIAGASAYP-R-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKS  315 (529)
Q Consensus       247 i~~--~~pklIi~~~s~~p-~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~  315 (529)
                      +++  .++++|+++..+++ + ..+    +++|+++|++||++||+|++|. |+ ..+.. . ..+. ..|++  |++|+
T Consensus       197 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~~~~di~--s~sK~  272 (434)
T 2epj_A          197 FAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVT-GF-RLGLEGAQGYFNIEGDII--VLGKI  272 (434)
T ss_dssp             HHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTT-TT-TSSTTHHHHHHTCCCSEE--EEEGG
T ss_pred             HHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchh-ce-eCCcchhhHHhCCCCCee--eecch
Confidence            875  26778888754332 3 566    9999999999999999999976 55 22210 0 0001 35775  56799


Q ss_pred             cc-CCCCeEEEeeCCCcchhHHHhhhcccc--cC-CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Q 009673          316 LR-GPRGGMIFFKKDPVLGVELESAINNAV--FP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLV  391 (529)
Q Consensus       316 l~-GprgG~i~~~~~~~~~~~l~~~i~~~~--~p-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~  391 (529)
                      ++ |.++|++++++      ++.+.+....  +. +..++ +...+++..++|+.+..   +++.+++.++++++.+.|+
T Consensus       273 l~~G~~~G~v~~~~------~~~~~l~~~~~~~~~~t~~~-~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~~L~  342 (434)
T 2epj_A          273 IGGGFPVGAVAGSR------EVMSLLTPQGKVFNAGTFNA-HPITMAAGLATLKALEE---EPVYSVSREAAKALEEAAS  342 (434)
T ss_dssp             GGTTSSCEEEEECH------HHHTTBTTTSSBCCCCTTTT-CHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHH
T ss_pred             hcCCcceeeeeecH------HHHHhhccCCCcccCCCCCc-CHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHH
Confidence            84 46889999987      6777665411  11 11222 33344444456765532   2356777778888888886


Q ss_pred             hc----CcEE-ecCCCCCceEEEccCCCC------------CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccC
Q 009673          392 EL----GYKL-VSGGSDNHLVLVDLRPMG------------IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSP  454 (529)
Q Consensus       392 ~~----G~~v-~~~gt~~~~~~v~~~~~~------------i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~  454 (529)
                      +.    ++.. +.+  ...++++++....            .+...+.+.|.++||.+..    +.     ...+|++. 
T Consensus       343 ~~~~~~~~~~~~~~--~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~~-----~~~~~~~~-  410 (434)
T 2epj_A          343 EVLDRTGLPYTINR--VESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAP----SN-----LEAVFTGL-  410 (434)
T ss_dssp             HHHHHHTCCEEEEE--ETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCS----ST-----TSCEECCT-
T ss_pred             HHHhhCCCcEEEEE--eeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEec----cC-----CCcEEEec-
Confidence            63    5532 222  2345666664311            1235677778789999843    21     13466542 


Q ss_pred             CCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          455 AMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       455 ~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                           .++++|++++++.|++++..
T Consensus       411 -----~~t~e~i~~~l~~l~~~l~~  430 (434)
T 2epj_A          411 -----PHQGEALEIAVEGLRSSLKT  430 (434)
T ss_dssp             -----TCSHHHHHHHHHHHHHHHHH
T ss_pred             -----cCCHHHHHHHHHHHHHHHHH
Confidence                 25689999999999988764

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=99.74  E-value=4.5e-16  Score=165.05  Aligned_cols=328  Identities=13%  Similarity=0.036  Sum_probs=183.4

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc--CC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP  191 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--~p  191 (529)
                      .+|.|.+|+...+... .. +....+  ..+    .....+++++++++.+..+  -.+..+||++|+..++..+.  ..
T Consensus        81 ~~p~v~~A~~~~~~~~-~~-~~~~~~--~~~----~~~~la~~l~~~~~~~~~~--~v~~~~sGseA~~~alk~a~~~~g  150 (453)
T 4ffc_A           81 SHPAVAAAIADQATHF-TH-TCFMVT--PYE----QYVQVAELLNALTPGDHDK--RTALFNSGAEAVENAIKVARLATG  150 (453)
T ss_dssp             TCHHHHHHHHHHHHHC-SC-CTTTTS--CCH----HHHHHHHHHHHHSSCSSCE--EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHhc-cc-cccCcC--CCH----HHHHHHHHHHHhCCCCCCc--EEEEeCcHHHHHHHHHHHHHHhcC
Confidence            4899999998877532 11 111111  122    2223347888888754211  12445778899999986654  24


Q ss_pred             CCEEEEcCCCCCcccccccc------ccccccccccceEEEEEcccCC-CCCCCC--------HHHHHHHhhhcCCcEEE
Q 009673          192 HDRIMGLDLPHGGHLSHGFM------TPKRRVSGTSIYFESMPYRLDE-STGLVD--------YDMLEKTAILFRPKLII  256 (529)
Q Consensus       192 GD~Vl~~~~~~~g~~s~g~~------~~~~~i~~~g~~~~~v~~~v~~-~~~~iD--------~d~le~~i~~~~pklIi  256 (529)
                      +++|++.++.|.|+......      .++.........+..++++... +.+..+        .+.|++.+...++.+|+
T Consensus       151 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi  230 (453)
T 4ffc_A          151 RPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAII  230 (453)
T ss_dssp             CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEE
T ss_pred             CCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            58999998876443210000      0000000111123344443211 111222        45566666543445566


Q ss_pred             EcCCCCCC---CCC----HHHHHHHHHHhCCEEEEecccccccccccccCCCCC----cccEEEecccccc-cCCCCeEE
Q 009673          257 AGASAYPR---DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSL-RGPRGGMI  324 (529)
Q Consensus       257 ~~~s~~p~---~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~----~aDiv~~S~hK~l-~GprgG~i  324 (529)
                      +. |+++.   ..+    +++|+++|++||++||+|++|. |+...+.. ..++    ..|+++  ++|++ .|+|.|++
T Consensus       231 ~e-p~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~g~~g~~-~a~~~~~~~pdi~t--~sK~~~~G~~~G~~  305 (453)
T 4ffc_A          231 IE-PIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQT-GFARTGAW-FASEHEGIVPDIVT--MAKGIAGGMPLSAV  305 (453)
T ss_dssp             EC-SSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSS-STHHHHTCCCSEEE--ECGGGGTTSSCEEE
T ss_pred             Ec-CCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCcc-CCCccccc-chhhhcCCCcchHh--hhhhhcCCcCeEEE
Confidence            65 43332   333    8999999999999999999964 43222211 0111    246665  55998 56788999


Q ss_pred             EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----c-CcEEec
Q 009673          325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----L-GYKLVS  399 (529)
Q Consensus       325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~-G~~v~~  399 (529)
                      ++++      ++.+.+......+..+++...+.+++ ++|+.+..+   ++.+++.++.+++.+.|.+    . ++..+.
T Consensus       306 ~~~~------~i~~~~~~~~~~~t~~~~~~~~aaa~-aal~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~  375 (453)
T 4ffc_A          306 TGRA------ELMDAVYAGGLGGTYGGNPVTCAAAV-AALGVMREL---DLPARARAIEASVTSRLSALAEEVDIIGEVR  375 (453)
T ss_dssp             EEEH------HHHTTSCTTSSCCSSSSCHHHHHHHH-HHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCSSEEEEE
T ss_pred             EECH------HHHhhhcccCcCCCCCcCHHHHHHHH-HHHHHhhhh---hHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE
Confidence            9988      77777765443334444444444443 356654322   3455566666666666654    2 233222


Q ss_pred             CCCCCceEEEccCC------CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673          400 GGSDNHLVLVDLRP------MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI  473 (529)
Q Consensus       400 ~gt~~~~~~v~~~~------~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i  473 (529)
                      +  ...++++++..      .......+.+.|.+.||.+..    +..   ..+.+||..+..    .+++|++++++.|
T Consensus       376 ~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~~~---~~~~iRi~~~~~----~t~e~i~~~l~~l  442 (453)
T 4ffc_A          376 G--RGAMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILT----CGT---FGNVIRLLPPLV----IGDDLLDEGITAL  442 (453)
T ss_dssp             E--ETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCE----ECT---TSCEEEECCCTT----CCHHHHHHHHHHH
T ss_pred             e--eceEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEec----CCC---CCCEEEEECCCC----CCHHHHHHHHHHH
Confidence            2  12455555532      111245577778889999843    211   236899986644    4589999999999


Q ss_pred             HHHHHH
Q 009673          474 HEGVEI  479 (529)
Q Consensus       474 ~~~~~~  479 (529)
                      ++++..
T Consensus       443 ~~~l~~  448 (453)
T 4ffc_A          443 SDIIRA  448 (453)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998864

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=99.74  E-value=6.6e-16  Score=163.69  Aligned_cols=329  Identities=12%  Similarity=0.029  Sum_probs=182.2

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC--C
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--P  191 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--p  191 (529)
                      .+|.|.+|+...+... .. +....  ...+    ......++++++++.+..+  -.+..+||++|+..++..+..  .
T Consensus        78 ~~p~v~~A~~~~~~~~-~~-~~~~~--~~~~----~~~~la~~l~~~~~~~~~~--~v~~~~sGseA~~~Alk~a~~~~g  147 (451)
T 3oks_A           78 SAPKVVEAVRSQVGDF-TH-TCFMV--TPYE----GYVAVCEQLNRLTPVRGDK--RSALFNSGSEAVENAVKIARSHTH  147 (451)
T ss_dssp             TCHHHHHHHHHHHTTC-SC-CTTTT--SCCH----HHHHHHHHHHHHSSCCSSE--EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHhc-cc-ccCCc--cCCH----HHHHHHHHHHHhCCcCCCC--EEEEeCcHHHHHHHHHHHHHHhcC
Confidence            4899999998877432 11 11111  1122    2223347888888754211  124457788999999876643  4


Q ss_pred             CCEEEEcCCCCCccccccc------cccccccccccceEEEEEccc---------CCCC-CCCCHHHHHHHhh----hcC
Q 009673          192 HDRIMGLDLPHGGHLSHGF------MTPKRRVSGTSIYFESMPYRL---------DEST-GLVDYDMLEKTAI----LFR  251 (529)
Q Consensus       192 GD~Vl~~~~~~~g~~s~g~------~~~~~~i~~~g~~~~~v~~~v---------~~~~-~~iD~d~le~~i~----~~~  251 (529)
                      +++|++.++.|.|......      ..++.........+..++++.         +.+. ...+++.+++.++    ..+
T Consensus       148 ~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (451)
T 3oks_A          148 KPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADN  227 (451)
T ss_dssp             CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGG
T ss_pred             CCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCC
Confidence            5899998887644321000      000000101111233444331         1000 0123454545444    224


Q ss_pred             CcEEEEcCCCC-CC-CCC----HHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEecccccc-cCCCC
Q 009673          252 PKLIIAGASAY-PR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRG  321 (529)
Q Consensus       252 pklIi~~~s~~-p~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l-~Gprg  321 (529)
                      +.+|++...+. ++ ..+    +++|+++|++||++||+|++|. |+...+...  ..+. ..|++  |++|++ .|+|.
T Consensus       228 ~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~i  304 (451)
T 3oks_A          228 LAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQT-GFARTGAMFACEHEGIDPDLI--VTAKGIAGGLPL  304 (451)
T ss_dssp             EEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEE--EECGGGGTTSSC
T ss_pred             EEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-CCCccccchhhhhcCCCCCee--eehhhhhCCcce
Confidence            56666653322 22 333    9999999999999999999964 443222110  0011 35777  556998 56788


Q ss_pred             eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----c-CcE
Q 009673          322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----L-GYK  396 (529)
Q Consensus       322 G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~-G~~  396 (529)
                      |++++++      ++.+.+......+..+++...+.+++ ++++.+...   ++.+++.++.+++.+.|.+    . .+.
T Consensus       305 G~v~~~~------~~~~~~~~~~~~~t~~~~~~~~aaa~-aal~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~  374 (451)
T 3oks_A          305 SAVTGRA------EIMDSPHVSGLGGTYGGNPIACAAAL-ATIETIESE---GLVARAQQIEKIMKDRLGRLQAEDDRIG  374 (451)
T ss_dssp             EEEEEEH------HHHTCSCTTSBCCSSSSCHHHHHHHH-HHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTEE
T ss_pred             EEEEECH------HHHhhhcCCCcCCCCCCCHHHHHHHH-HHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence            9999987      77777765433334444444444443 466654322   3455666666667766654    2 232


Q ss_pred             EecCCCCCceEEEccCC------CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673          397 LVSGGSDNHLVLVDLRP------MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA  470 (529)
Q Consensus       397 v~~~gt~~~~~~v~~~~------~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la  470 (529)
                      .+.+  ...++++++..      ...+...+.+.|.+.||.+...    ..   ....+||..+..    .+++++++++
T Consensus       375 ~~~~--~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----~~---~~~~iRi~~~~~----~t~e~i~~~l  441 (451)
T 3oks_A          375 DVRG--RGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSC----GT---YGNVVRFLPPLS----IGDDLLNEGL  441 (451)
T ss_dssp             EEEE--ETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEE----CT---TSCEEEECCCTT----CCHHHHHHHH
T ss_pred             EEEE--eeEEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecC----CC---CCCEEEEECCCC----CCHHHHHHHH
Confidence            2222  12355555521      1112455777788899998532    11   236899986643    4589999999


Q ss_pred             HHHHHHHH
Q 009673          471 DFIHEGVE  478 (529)
Q Consensus       471 ~~i~~~~~  478 (529)
                      +.|++++.
T Consensus       442 ~~l~~~l~  449 (451)
T 3oks_A          442 DVLEEVLR  449 (451)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99998875

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=99.74  E-value=1.9e-16  Score=168.87  Aligned_cols=320  Identities=13%  Similarity=0.019  Sum_probs=187.9

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK---  190 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~---  190 (529)
                      .+|.|.+|+...+.. +...+...+|  ..+...+    ..++++++++.+.+.   .+..+||++|+..++..+..   
T Consensus        72 ~~p~v~~A~~~~~~~-~~~~~~~~~~--~~~~~~~----lae~l~~~~~~~~~~---v~~~~sGseA~~~aik~a~~~~~  141 (472)
T 3hmu_A           72 GRDELAEVAARQMRE-LPYYNTFFKT--THVPAIA----LAQKLAELAPGDLNH---VFFAGGGSEANDTNIRMVRTYWQ  141 (472)
T ss_dssp             CCHHHHHHHHHHHHH-CSCCCSSSSE--ECHHHHH----HHHHHHHHSCTTEEE---EEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHh-cccccccccc--CCHHHHH----HHHHHHHhCCCCCCE---EEEeCCHHHHHHHHHHHHHHHHH
Confidence            479999999887753 2211221111  1222222    347788888765432   24456788999999988764   


Q ss_pred             -----CCCEEEEcCCCCCcccccccccccccccccc-----------ceEEEEEccc--CCCCCCCC--------HHHHH
Q 009673          191 -----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-----------IYFESMPYRL--DESTGLVD--------YDMLE  244 (529)
Q Consensus       191 -----pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g-----------~~~~~v~~~v--~~~~~~iD--------~d~le  244 (529)
                           ++++|++.++.|.|... +      .....+           ..+..++++.  +..++ .|        +++|+
T Consensus       142 ~~g~~~~~~ii~~~~~yHg~t~-~------~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le  213 (472)
T 3hmu_A          142 NKGQPEKTVIISRKNAYHGSTV-A------SSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELE  213 (472)
T ss_dssp             HTTCTTCCEEEEETTCCCCSSH-H------HHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHH
T ss_pred             hcCCCCCCEEEEEcCcCCCccH-H------hhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHH
Confidence                 46899999887643210 0      001111           0123334322  10111 34        78888


Q ss_pred             HHhhh---cCCcEEEEcCCCCCC--CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-CC-CCC-cccEEEecc
Q 009673          245 KTAIL---FRPKLIIAGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-AD-PFK-YCDVVTTTT  312 (529)
Q Consensus       245 ~~i~~---~~pklIi~~~s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~-~~~-~aDiv~~S~  312 (529)
                      ++++.   .++++|+++..++++  ..+    +++|+++|++||++||+|++|. |+...|.. .. .+. ..|++++  
T Consensus       214 ~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~-gfgr~G~~~a~~~~~v~pdi~t~--  290 (472)
T 3hmu_A          214 EAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVIC-GFGRTGNWFGTQTMGIRPHIMTI--  290 (472)
T ss_dssp             HHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSCHHHHHTCCCSEEEE--
T ss_pred             HHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-CCcccCccchhHHhCCCCceeee--
Confidence            88873   256777776544332  444    8999999999999999999964 43222210 00 001 3578765  


Q ss_pred             cccccC--CCCeEEEeeCCCcchhHHHhhhccc--ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHH-HHHHHHH
Q 009673          313 HKSLRG--PRGGMIFFKKDPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV-SNCRALA  387 (529)
Q Consensus       313 hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~--~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~-~~a~~l~  387 (529)
                      +|+|+|  ++.|++++++      ++.+.++..  ...+..+++.....++ .++|+.+..   +++.+++. ++.+++.
T Consensus       291 sK~l~gg~~plG~v~~~~------~i~~~~~~~~~~~~~t~~~np~a~aAa-~aaL~~~~~---~~~~~~~~~~~~~~l~  360 (472)
T 3hmu_A          291 AKGLSSGYAPIGGSIVCD------EVAHVIGKDEFNHGYTYSGHPVAAAVA-LENLRILEE---ENILDHVRNVAAPYLK  360 (472)
T ss_dssp             CGGGTTTSSCCEEEEEEH------HHHHHHTTSCBCCCCTTTTCHHHHHHH-HHHHHHHHH---TTHHHHHHHTHHHHHH
T ss_pred             chhhhcCCcceEEEEECH------HHHHhcccCCccccCCCCCCHHHHHHH-HHHHHHHHH---hHHHHHHHHHHHHHHH
Confidence            599966  7889999988      777777322  1122233333333333 346765532   24566677 7778888


Q ss_pred             HHHHhc----CcEEecCCCCCceEEEccCCCCC-----------cHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEc
Q 009673          388 SRLVEL----GYKLVSGGSDNHLVLVDLRPMGI-----------DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIG  452 (529)
Q Consensus       388 ~~L~~~----G~~v~~~gt~~~~~~v~~~~~~i-----------~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig  452 (529)
                      +.|++.    ++..+.+  ...++.+++.....           ....+.+.|.+.||.+..    +     + +.|||+
T Consensus       361 ~~L~~l~~~~~v~~vr~--~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~-----g-~~iRi~  428 (472)
T 3hmu_A          361 EKWEALTDHPLVGEAKI--VGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRH----V-----G-DRMIIS  428 (472)
T ss_dssp             HHHHGGGGSTTEEEEEE--ETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEE----E-----T-TEEEEC
T ss_pred             HHHHHHhcCCCeEEEEe--cCceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEe----c-----C-CEEEEE
Confidence            888653    1222221  12344555432100           034567778788998843    1     1 789998


Q ss_pred             cCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          453 SPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       453 ~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      .+..    .+++|++++++.|++++...
T Consensus       429 p~~~----~t~e~i~~~l~~l~~~l~~~  452 (472)
T 3hmu_A          429 PPLV----ITPAEIDEMFVRIRKSLDEA  452 (472)
T ss_dssp             CCTT----CCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCC----CCHHHHHHHHHHHHHHHHHH
Confidence            6644    45899999999999998654

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=99.74  E-value=1.8e-16  Score=167.94  Aligned_cols=313  Identities=12%  Similarity=0.077  Sum_probs=185.4

Q ss_pred             CcHHHH-H-HHhh---hhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC-CCCCCCceeeecCChHHHHHHHHHh
Q 009673          114 TSRAVM-E-AVGS---CLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGSPANFEVYTA  187 (529)
Q Consensus       114 ~~~~V~-e-al~~---~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g-~~~~~~~~~V~~~sGs~A~~~~l~a  187 (529)
                      .+|.|+ + |+..   .+... .. + +.+|  ..+...++    .++++++++ .+.++   .+..++|++|+..++..
T Consensus        71 ~~p~v~~~~A~~~~~~~~~~~-~~-~-~~~~--~~~~~~~l----a~~la~~~~~~~~~~---v~~~~~gseA~~~aik~  138 (449)
T 2cjg_A           71 NPPALVDDREFHAELMQAALN-KP-S-NSDV--YSVAMARF----VETFARVLGDPALPH---LFFVEGGALAVENALKA  138 (449)
T ss_dssp             SCHHHHTCHHHHHHHHHHHTC-CC-C-TTTC--CCHHHHHH----HHHHHHHHCCTTCCE---EEEESSHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHhc-CC-C-Cccc--CCHHHHHH----HHHHHHhcCCCCCCE---EEEeCchHHHHHHHHHH
Confidence            478999 8 8887   54322 11 1 1122  12222333    367888886 33332   24456678999998875


Q ss_pred             hc---C----------C-CCEEEEcCCCCCccccccccccccccccccc------e-----EEEEEcccCCC-CC-----
Q 009673          188 IL---K----------P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------Y-----FESMPYRLDES-TG-----  236 (529)
Q Consensus       188 ll---~----------p-GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~------~-----~~~v~~~v~~~-~~-----  236 (529)
                      +.   +          | ||+|+++++.|.|.....       +...+.      .     ..++.++.+.. ..     
T Consensus       139 a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  211 (449)
T 2cjg_A          139 AFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYT-------LSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMA  211 (449)
T ss_dssp             HHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTG-------GGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHH
T ss_pred             HHHHhcccccccccccCCCCEEEEECCCcCCcccch-------hhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccc
Confidence            42   2          2 899999998765432211       111110      0     13334443310 01     


Q ss_pred             ---CCCHHHHHHHhhh--cCCcEEEEcCCCCC-C-CCC----HHHHHHHHHHhCCEEEEecccccccccccccCCCC---
Q 009673          237 ---LVDYDMLEKTAIL--FRPKLIIAGASAYP-R-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---  302 (529)
Q Consensus       237 ---~iD~d~le~~i~~--~~pklIi~~~s~~p-~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---  302 (529)
                         ..|+++|++.++.  .++++|+++..+++ + ..+    +++|+++|++||++||+|++|. |+...+.. ..+   
T Consensus       212 ~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~-~~~~~~  289 (449)
T 2cjg_A          212 ALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQT-GCGLTGTA-WAYQQL  289 (449)
T ss_dssp             HHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSS-STHHHH
T ss_pred             hhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEecccc-CCCccCcc-eeeccc
Confidence               2566779988863  26788888765444 3 355    9999999999999999999976 44322211 011   


Q ss_pred             C-cccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcc-----cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHH
Q 009673          303 K-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINN-----AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ  376 (529)
Q Consensus       303 ~-~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~-----~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~  376 (529)
                      . ..|+++  ++|+|   +.|++++++      ++.+.+..     ....+..++ +....+|..++|+.+..   +++.
T Consensus       290 ~~~~di~t--~sK~l---~iG~~~~~~------~~~~~l~~~~~~~~~~~~t~~~-n~~~~~aa~aal~~~~~---~~~~  354 (449)
T 2cjg_A          290 DVAPDIVA--FGKKT---QVCGVMAGR------RVDEVADNVFAVPSRLNSTWGG-NLTDMVRARRILEVIEA---EGLF  354 (449)
T ss_dssp             TCCCSEEE--ECGGG---SSEEEEECG------GGGGSTTCTTTSTTSSCCSSSS-CHHHHHHHHHHHHHHHH---HTHH
T ss_pred             CCCceEEE--ecCcc---cEEEEEECH------HHhhhhhhcccCCcccccCCCC-CHHHHHHHHHHHHHHHh---ccHH
Confidence            1 357765  56998   688888887      56654221     111122233 33344444456765532   2456


Q ss_pred             HHHHHHHHHHHHHHHhc-----C-cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEE
Q 009673          377 NKVVSNCRALASRLVEL-----G-YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIR  450 (529)
Q Consensus       377 ~~i~~~a~~l~~~L~~~-----G-~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iR  450 (529)
                      +++.++++++.+.|++.     + +..+.+  ...++++++... .+..++.+.|.++||.+..    +     ..+.||
T Consensus       355 ~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~--~g~~~~~~~~~~-~~~~~~~~~l~~~Gv~v~~----~-----g~~~iR  422 (449)
T 2cjg_A          355 ERAVQHGKYLRARLDELAADFPAVVLDPRG--RGLMCAFSLPTT-ADRDELIRQLWQRAVIVLP----A-----GADTVR  422 (449)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSTTTSEEEEE--ETTEEEEECSSH-HHHHHHHHHHHHTTEECEE----E-----TTTEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeEee--ccEEEEEEECCh-HHHHHHHHHHHHCCeEEec----C-----CCCEEE
Confidence            77788888888888763     2 333322  234556676431 1245677777789999853    2     247899


Q ss_pred             EccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          451 IGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       451 ig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      |+.+..    .+++|++++++.|++++.
T Consensus       423 i~~~~~----~t~e~i~~~l~~l~~~l~  446 (449)
T 2cjg_A          423 FRPPLT----VSTAEIDAAIAAVRSALP  446 (449)
T ss_dssp             ECCCTT----CCHHHHHHHHHHHHHHHH
T ss_pred             EECCCC----CCHHHHHHHHHHHHHHHH
Confidence            986543    458999999999998875

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=99.73  E-value=3.7e-16  Score=163.93  Aligned_cols=320  Identities=15%  Similarity=0.062  Sum_probs=185.8

Q ss_pred             ceeEecCC--C---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673          104 SLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS  178 (529)
Q Consensus       104 ~i~L~ase--n---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs  178 (529)
                      .|++..+.  +   +.+|.|.+|+...+......+++       .+...+    ..++++++++ ..+.   .+..++|+
T Consensus        54 ~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-------~~~~~~----l~~~l~~~~~-~~~~---v~~~~~g~  118 (424)
T 2e7u_A           54 YLDYVMSWGPLILGHAHPKVLARVRETLERGLTFGAP-------SPLEVA----LAKKVKRAYP-FVDL---VRFVNSGT  118 (424)
T ss_dssp             EEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSC-------CHHHHH----HHHHHHHHCT-TCCE---EEEESSHH
T ss_pred             EEEccccccccccCCCCHHHHHHHHHHHHhCCCCCCC-------CHHHHH----HHHHHHHhCC-CCCE---EEEeCCHH
Confidence            46666543  2   35899999998887542111111       122233    3477888885 3332   24456778


Q ss_pred             HHHHHHHHh---hcCCCCEEEEcCCCCCccccccccccccc------cccccce----EEEEEcccCCCCCCCCHHHHHH
Q 009673          179 PANFEVYTA---ILKPHDRIMGLDLPHGGHLSHGFMTPKRR------VSGTSIY----FESMPYRLDESTGLVDYDMLEK  245 (529)
Q Consensus       179 ~A~~~~l~a---ll~pGD~Vl~~~~~~~g~~s~g~~~~~~~------i~~~g~~----~~~v~~~v~~~~~~iD~d~le~  245 (529)
                      +|+..++..   +. ++|.|++.++.|.++...........      ....|..    ..++.++      ..|+++|++
T Consensus       119 ea~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~------~~d~~~le~  191 (424)
T 2e7u_A          119 EATMSALRLARGYT-GRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLE------YNDPEGLRE  191 (424)
T ss_dssp             HHHHHHHHHHHHHH-CCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEEC------TTCHHHHHH
T ss_pred             HHHHHHHHHHHHhh-CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCC------CCCHHHHHH
Confidence            999988875   44 45888888887644321100000000      0001110    0122222      148999999


Q ss_pred             Hhhh--cCCcEEEEcCCCC-CC-CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccc
Q 009673          246 TAIL--FRPKLIIAGASAY-PR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHK  314 (529)
Q Consensus       246 ~i~~--~~pklIi~~~s~~-p~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK  314 (529)
                      .+++  .++++|+++..+. .+ ..+    +++|+++ ++||++||+|++|. |+ ..+.. . ..+. ..|++  |++|
T Consensus       192 ~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~~~~di~--s~sK  266 (424)
T 2e7u_A          192 VLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMT-GF-RLAFGGATELLGLKPDLV--TLGK  266 (424)
T ss_dssp             HHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTT-TT-TSSTTHHHHHHTCCCSEE--EECG
T ss_pred             HHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcc-cc-ccchhHHHHHhCCCcchh--hhhh
Confidence            9874  2567777764332 23 566    9999999 99999999999976 65 22210 0 0001 35766  6779


Q ss_pred             ccc-CCCCeEEEeeCCCcchhHHHhhhcccc--cC-CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 009673          315 SLR-GPRGGMIFFKKDPVLGVELESAINNAV--FP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL  390 (529)
Q Consensus       315 ~l~-GprgG~i~~~~~~~~~~~l~~~i~~~~--~p-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L  390 (529)
                      +++ |.++|++++++      ++.+.+....  +. +..++ +....++..++++.+..  .+++.+++.++++++.+.|
T Consensus       267 ~l~~G~~~G~~~~~~------~~~~~~~~~~~~~~~~t~~~-~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~~L  337 (424)
T 2e7u_A          267 ILGGGLPAAAYAGRR------EIMEKVAPLGPVYQAGTLSG-NPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEAGL  337 (424)
T ss_dssp             GGGTTSSCEEEEECH------HHHTTBTTTSSBCCCCTTCS-CHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCcceEEEEEcH------HHHhhhcccCCcccCCCCCC-CHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH
Confidence            984 56889999987      7777665411  11 11222 33344444446665432  1356777888888888888


Q ss_pred             Hhc----CcEE-ecCCCCCceEEEccCCCC------------CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEcc
Q 009673          391 VEL----GYKL-VSGGSDNHLVLVDLRPMG------------IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS  453 (529)
Q Consensus       391 ~~~----G~~v-~~~gt~~~~~~v~~~~~~------------i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~  453 (529)
                      ++.    ++.. +.+  ...++++++....            .+...+.+.|.++||.+..    +.     ...+|+++
T Consensus       338 ~~~~~~~~~~~~~~~--~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~~-----~~~~~~~~  406 (424)
T 2e7u_A          338 KEVLKEKGLPHTVNR--VGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPP----SN-----FEAAFLSV  406 (424)
T ss_dssp             HHHHHHTTCCCEEEE--ETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCS----SS-----SSCEECCT
T ss_pred             HHHHHhCCCceEEEe--eceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEec----cC-----CCceEeec
Confidence            763    5431 222  2346677775311            1234577777789999853    21     23466542


Q ss_pred             CCCccCCCCHHHHHHHHHHHHHH
Q 009673          454 PAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       454 ~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                            ..+++|++++++.|+++
T Consensus       407 ------~~t~~~i~~~l~~l~~~  423 (424)
T 2e7u_A          407 ------AHREEDVEKTLEALRKA  423 (424)
T ss_dssp             ------TCCHHHHHHHHHHHHHH
T ss_pred             ------cCCHHHHHHHHHHHHHh
Confidence                  25689999999999875

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=99.73  E-value=3.2e-15  Score=157.04  Aligned_cols=319  Identities=14%  Similarity=0.092  Sum_probs=182.1

Q ss_pred             cceeEecCC--C---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673          103 KSLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG  177 (529)
Q Consensus       103 ~~i~L~ase--n---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG  177 (529)
                      ..|++.++-  +   ..+|+|.+|+...+.+....+|+       .+...+    ..++++++++ ..+.   .+..+||
T Consensus        54 ~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~-------~~~~~~----la~~l~~~~~-~~~~---v~~~~sG  118 (429)
T 4e77_A           54 AYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGAP-------TEMEVK----MAQLVTDLVP-TMDM---VRMVNSG  118 (429)
T ss_dssp             EEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSC-------CHHHHH----HHHHHHHHST-TCSE---EEEESSH
T ss_pred             EEEECCCchhccccCCCCHHHHHHHHHHHHhCcccCCC-------CHHHHH----HHHHHHhhCC-CCCE---EEEeCcH
Confidence            346655433  2   25899999998887543322222       222223    3367888886 3332   3445778


Q ss_pred             HHHHHHHHHhhc--CCCCEEEEcCCCCCccccccccccccccccccceE-----------------EEEEcccCCCCCCC
Q 009673          178 SPANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF-----------------ESMPYRLDESTGLV  238 (529)
Q Consensus       178 s~A~~~~l~all--~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~-----------------~~v~~~v~~~~~~i  238 (529)
                      ++|+..++....  ..+++|++.++.+.|....       .+...+...                 .+..++      ..
T Consensus       119 sea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  185 (429)
T 4e77_A          119 TEATMSAIRLARGYTGRDKIIKFEGCYHGHADC-------LLVKAGSGALTLGQPNSPGVPTDFAKHTLTCT------YN  185 (429)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEETTCCCC-------------------------CCCTTSCGGGGTTEEEEC------TT
T ss_pred             HHHHHHHHHHHHHhhCCCEEEEEcCccCCCChh-------hhhhcCCcccccCCCCcCCCCCccCCceeecC------CC
Confidence            899999887542  3567888887765333210       000000000                 011111      23


Q ss_pred             CHHHHHHHhhhc--CCcEEEEcCCCC-CC-CCC----HHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccE
Q 009673          239 DYDMLEKTAILF--RPKLIIAGASAY-PR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDV  307 (529)
Q Consensus       239 D~d~le~~i~~~--~pklIi~~~s~~-p~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDi  307 (529)
                      |+++|++++++.  ++++|+++..++ ++ ..+    +++|+++|++||++||+|++|. |+ ..+...  ..+. ..|+
T Consensus       186 d~~~le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g~-r~g~~~~~~~~~~~pdi  263 (429)
T 4e77_A          186 DLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMT-GF-RVALAGAQDYYHVIPDL  263 (429)
T ss_dssp             CHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTT-BT-TTBTTCHHHHTTCCCSE
T ss_pred             CHHHHHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-Cc-ccCcchHHHhcCCCCCe
Confidence            899999999753  456666654332 22 444    9999999999999999999976 54 222110  0011 3477


Q ss_pred             EEecccccc-cCCCCeEEEeeCCCcchhHHHhhhcccc--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673          308 VTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR  384 (529)
Q Consensus       308 v~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~  384 (529)
                      +  |++|++ +|+++|++++++      ++.+.+....  +.+...+.+...+++..++|+.+..+   ++.+++.++.+
T Consensus       264 ~--t~sK~~~~G~~~G~~~~~~------~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~  332 (429)
T 4e77_A          264 T--CLGKIIGGGMPVGAFGGRR------EVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQV---GVYETLTELTD  332 (429)
T ss_dssp             E--EEEGGGGTTSCCEEEEECH------HHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTST---THHHHHHHHHH
T ss_pred             e--eecccccCCCCeEEEEECH------HHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHH
Confidence            5  566998 467889999987      6777665421  11111123444445555577766433   44566666777


Q ss_pred             HHHHHHHh----cCcEEecCCCCCceEEEccCCCC-------------CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCC
Q 009673          385 ALASRLVE----LGYKLVSGGSDNHLVLVDLRPMG-------------IDGARVEKILDMASITLNKNSVPGDKSALVPG  447 (529)
Q Consensus       385 ~l~~~L~~----~G~~v~~~gt~~~~~~v~~~~~~-------------i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~  447 (529)
                      ++.+.|.+    .++.....+ ...++++.+....             .....+.+.|.+.||.+..    +.     ..
T Consensus       333 ~l~~~L~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~----~~-----~~  402 (429)
T 4e77_A          333 SLATGLRHAAKEENIPLVVNH-VGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAP----SA-----FE  402 (429)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEE-ETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCS----ST-----TS
T ss_pred             HHHHHHHHHHHhCCCceEEEE-eeeEEEEEEccCcccccccccccccHHHHHHHHHHHHHCCeEEee----cC-----CC
Confidence            77777755    243322211 2345566654320             0125577777788999843    21     23


Q ss_pred             eEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          448 GIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       448 ~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .+|++.      ..+++|++++++.|++++.
T Consensus       403 ~~~~~~------~~t~e~i~~~l~~l~~~l~  427 (429)
T 4e77_A          403 AGFMSL------AHSNEDIQKTVNAARRCFA  427 (429)
T ss_dssp             CEECCT------TCCHHHHHHHHHHHHHHHT
T ss_pred             CEEEec------cCCHHHHHHHHHHHHHHHH
Confidence            566642      2568999999999998764

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=99.72  E-value=7.3e-16  Score=163.20  Aligned_cols=322  Identities=13%  Similarity=0.082  Sum_probs=184.8

Q ss_pred             cceeEecCC--C---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673          103 KSLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG  177 (529)
Q Consensus       103 ~~i~L~ase--n---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG  177 (529)
                      ..|++..+.  +   +.++.|.+++...+.....  +      ++   .++++....++++++++ ..+.   .+..++|
T Consensus        58 ~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~--~------~~---~~~~~~~la~~l~~~~~-~~~~---v~~~~gg  122 (453)
T 2cy8_A           58 VYLDFFGGHGALVLGHGHPRVNAAIAEALSHGVQ--Y------AA---SHPLEVRWAERIVAAFP-SIRK---LRFTGSG  122 (453)
T ss_dssp             EEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTCS--S------CS---SCHHHHHHHHHHHHHCT-TCSE---EEEESCH
T ss_pred             EEEECcccHhhcccCCCCHHHHHHHHHHHHhCCC--C------CC---CCHHHHHHHHHHHhhCC-CCCE---EEEeCCH
Confidence            346665543  2   3589999999887754211  1      11   12445555688888886 4432   2445677


Q ss_pred             HHHHHHHHHh---hcCCCCEEEEcCCCCCcccccccccccc---ccccccceE----EEEEcccCCCCCCCCHHHHHHHh
Q 009673          178 SPANFEVYTA---ILKPHDRIMGLDLPHGGHLSHGFMTPKR---RVSGTSIYF----ESMPYRLDESTGLVDYDMLEKTA  247 (529)
Q Consensus       178 s~A~~~~l~a---ll~pGD~Vl~~~~~~~g~~s~g~~~~~~---~i~~~g~~~----~~v~~~v~~~~~~iD~d~le~~i  247 (529)
                      ++|+..++.+   +.+ +|+|++.++.|.|...........   .....|...    .++.++      ..|+++|++++
T Consensus       123 ~eA~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~d~~~le~~l  195 (453)
T 2cy8_A          123 TETTLLALRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIR------PDDIEGMREVF  195 (453)
T ss_dssp             HHHHHHHHHHHHHHHC-CCEEEEECC----------------------------CGGGEEEEC------TTCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecC------CCCHHHHHHHH
Confidence            7999999887   555 467888887664332100000000   000011100    111221      14899999998


Q ss_pred             hhc--CCcEEEEcCCCCC-C-CCC----HHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEecccccc
Q 009673          248 ILF--RPKLIIAGASAYP-R-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL  316 (529)
Q Consensus       248 ~~~--~pklIi~~~s~~p-~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l  316 (529)
                      ++.  ++++|+++..+++ + ..+    +++|+++|++||++||+|++|. |+ ..+...  ..+. ..|++  |++|+|
T Consensus       196 ~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~~~~di~--s~sK~l  271 (453)
T 2cy8_A          196 ANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GF-RVGNHGMQALLDVQPDLT--CLAKAS  271 (453)
T ss_dssp             HHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TT-TTCTTHHHHHHTCCCSEE--EEEGGG
T ss_pred             HhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-cc-ccCchhhhHHhCCCCcEE--EEChhh
Confidence            742  5678877654332 2 456    9999999999999999999976 65 222100  0011 35766  567998


Q ss_pred             c-CCCCeEEEeeCCCcchhHHHhhhcc---c-ccC-CCCCCChHHHHHHHHHHHHH-hcCchHHHHHHHHHHHHHHHHHH
Q 009673          317 R-GPRGGMIFFKKDPVLGVELESAINN---A-VFP-GLQGGPHNHTIGGLAVCLKH-AQSPEFKVYQNKVVSNCRALASR  389 (529)
Q Consensus       317 ~-GprgG~i~~~~~~~~~~~l~~~i~~---~-~~p-~~~g~p~~~~iaala~al~~-~~~~~~~~~~~~i~~~a~~l~~~  389 (529)
                      + |+++|++++++      ++.+.+..   . .+. +..++ +....++...+++. + .   +++.+++.++++++.+.
T Consensus       272 ~~G~~~G~v~~~~------~~~~~l~~~~~~~~~~~~t~~~-n~~~~aa~~aal~~~~-~---~~~~~~~~~~~~~l~~~  340 (453)
T 2cy8_A          272 AGGLPGGILGGRE------DVMGVLSRGSDRKVLHQGTFTG-NPITAAAAIAAIDTIL-E---DDVCAKINDLGQFAREA  340 (453)
T ss_dssp             GTTSSCEEEEECH------HHHTTSSSCC---------CCC-CHHHHHHHHHHHHHHH-H---TTHHHHHHHHHHHHHHH
T ss_pred             hCCcceEEEechH------HHHHHhccccCCCceeCCCCCC-CHHHHHHHHHHHHHHh-h---hhHHHHHHHHHHHHHHH
Confidence            5 57899999987      67776654   1 011 11222 33344444456765 4 2   23456777778888888


Q ss_pred             HHhc----CcEE-ecCCCCCceEEEccCC-----C-------------CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCC
Q 009673          390 LVEL----GYKL-VSGGSDNHLVLVDLRP-----M-------------GIDGARVEKILDMASITLNKNSVPGDKSALVP  446 (529)
Q Consensus       390 L~~~----G~~v-~~~gt~~~~~~v~~~~-----~-------------~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~  446 (529)
                      |++.    ++.. +.+  ...++++++..     .             ..+..++.+.|.++||.+.    |+       
T Consensus       341 L~~~~~~~~~~~~~~~--~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~----~~-------  407 (453)
T 2cy8_A          341 MNHLFARKGLNWLAYG--RFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIG----GR-------  407 (453)
T ss_dssp             HHHHHHHTTCCEEEEC--CTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECB----TT-------
T ss_pred             HHHHHhhCCCcEEEEE--eeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEEe----CC-------
Confidence            8653    4422 222  23466776653     1             0123557777778899982    32       


Q ss_pred             CeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          447 GGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       447 ~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      +.+|+++      .++++|++++++.|++++...
T Consensus       408 ~~~~l~~------~~t~~~i~~~l~~l~~~l~~~  435 (453)
T 2cy8_A          408 GSVFLSA------QHEREHVEHLVTTFDRVLDRL  435 (453)
T ss_dssp             TEEECCT------TCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEeec------cCCHHHHHHHHHHHHHHHHHH
Confidence            2466541      257899999999999988643

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.71  E-value=3.6e-16  Score=161.70  Aligned_cols=313  Identities=12%  Similarity=0.121  Sum_probs=188.6

Q ss_pred             CchhHHH-HHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCC---C-CEEEEcCCCCCccccccccccccc
Q 009673          142 GNEYIDE-LETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP---H-DRIMGLDLPHGGHLSHGFMTPKRR  216 (529)
Q Consensus       142 g~~~~d~-lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~p---G-D~Vl~~~~~~~g~~s~g~~~~~~~  216 (529)
                      |...+.. -|.++.+|++.+ |++...  ..+.+..+|.++++++++.+++   | |+|+++...|-+.+        +.
T Consensus       110 Gssll~~ltn~l~ld~L~~~-G~~~~~--~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~--------kA  178 (501)
T 3hl2_A          110 GSSLLNKITNSLVLDIIKLA-GVHTVA--NCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCF--------KS  178 (501)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT-TCTTCC--EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHH--------HH
T ss_pred             chHHHHHHHHHHHHHHHHHc-CCCCCC--cEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHH--------HH
Confidence            4444433 355666777776 998642  1122233345777777776664   4 99999887664432        35


Q ss_pred             cccccceEEEEEcc--cCCCCCCCCHHHHHHHhhhcCCc--EEEEc-CCCC-CC-CCCHHHHHHHHHHhCCEEEEecccc
Q 009673          217 VSGTSIYFESMPYR--LDESTGLVDYDMLEKTAILFRPK--LIIAG-ASAY-PR-DFDYPRMRQIADAVGALLMMDMAHI  289 (529)
Q Consensus       217 i~~~g~~~~~v~~~--v~~~~~~iD~d~le~~i~~~~pk--lIi~~-~s~~-p~-~~d~~~i~~ia~~~g~~livD~ah~  289 (529)
                      +.+.|.  +++.++  ++.+...+|+++|+++|+++.++  ++++. .+.| |+ ..|+++|+++|++||+++++|+||.
T Consensus       179 liL~Gl--~Pv~V~p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhG  256 (501)
T 3hl2_A          179 MITAGF--EPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYG  256 (501)
T ss_dssp             HHHTTC--EEEEECEEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTC
T ss_pred             HHHcCC--eEEEEeeeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcch
Confidence            566776  444433  33345789999999999886433  33333 4455 44 5799999999999999999999987


Q ss_pred             cccccccccC-CCCC-c-ccEEEecccccccCCCCeEE-EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHH
Q 009673          290 SGLVAASVVA-DPFK-Y-CDVVTTTTHKSLRGPRGGMI-FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK  365 (529)
Q Consensus       290 ~Gli~~~~~~-~~~~-~-aDiv~~S~hK~l~GprgG~i-~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~  365 (529)
                      ..+......+ ..+. + +|+++.|+||++..|-||.+ +.+++     ++.+++.. .+|+.+++   ...+.+..++.
T Consensus       257 ah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~-----e~l~~~~~-~yPGr~S~---Spsldl~~tLL  327 (501)
T 3hl2_A          257 VQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFND-----SFIQEISK-MYPGRASA---SPSLDVLITLL  327 (501)
T ss_dssp             TTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCH-----HHHHHHHH-TSCSCBCS---HHHHHHHHHHH
T ss_pred             hhhhhhhhhHHHHHhcCCCcEEEecccccceeecCceEEEeCCH-----HHHHHHHH-hCCCCCCC---cHHHHHHHHHH
Confidence            6553322111 1122 4 99999999999988877644 45653     66666643 45665432   12233344555


Q ss_pred             HhcCchHHHHHHHHHHHHHHHHHHHHh----cCcEEecCCCCCceE-EEccCCCC----CcHHHHHHhHhcCCeEEcCCC
Q 009673          366 HAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLVSGGSDNHLV-LVDLRPMG----IDGARVEKILDMASITLNKNS  436 (529)
Q Consensus       366 ~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~~v~~~gt~~~~~-~v~~~~~~----i~~~~~~~~L~~~GI~v~~~~  436 (529)
                      .+...+|++..++..+++++|.+.|++    .|-+++.. ..|.+. -+.+...+    -+..++-..|-..+|.-....
T Consensus       328 ~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~-~~n~is~a~tl~~~~~~~~~~~t~~gs~Lf~r~vsG~Rvv  406 (501)
T 3hl2_A          328 SLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHT-PHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVV  406 (501)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCC-TTCSSEEEEECTTSCTTTSCHHHHHHHHHHHTTCCSCEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCC-CCCceeEEEecccccccccccHHHHHHHHHhcCCCcceee
Confidence            556678899999999999999999987    35555531 224432 23343221    112334444444443211100


Q ss_pred             CCCCC---------------CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHH
Q 009673          437 VPGDK---------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITL  481 (529)
Q Consensus       437 ~Pg~~---------------~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~  481 (529)
                      .||+.               ..+...++-+.    ..-|++++|++.+.+.|++++....
T Consensus       407 ~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a----~aiG~~~~~v~~~~~~l~~~~~~~~  462 (501)
T 3hl2_A          407 PLGSMQTVSGYTFRGFMSHTNNYPCAYLNAA----SAIGMKMQDVDLFIKRLDRCLKAVR  462 (501)
T ss_dssp             CTTCCEEETTEEESSTTTTSSCCSSCEEEEE----CCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCceEECCeeecCcccCCCCCCchHHHHH----HHcCCCHHHHHHHHHHHHHHHHHHH
Confidence            12221               00111223221    2358999999999999999998653

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=99.62  E-value=1.2e-14  Score=154.84  Aligned_cols=316  Identities=14%  Similarity=0.120  Sum_probs=178.7

Q ss_pred             CcHHHHHHHhhhhhcc-CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673          114 TSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---  189 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~-y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---  189 (529)
                      .+|.|.+|+...+... +..+.   . ++. ....++++.+.++++++++...+.   .+...||++||..++..+.   
T Consensus        80 ~~p~v~~A~~~~~~~~~~~~~~---~-~~~-~~~~~l~~~la~~l~~~~~~~~~~---v~f~~sGseA~~~Aik~a~~~~  151 (472)
T 1ohv_A           80 SHPALVKLVQQPQNVSTFINRP---A-LGI-LPPENFVEKLRESLLSVAPKGMSQ---LITMACGSCSNENAFKTIFMWY  151 (472)
T ss_dssp             TCHHHHHHHHCGGGHHHHHCCC---C-TTT-SCBTTHHHHHHHTGGGGCCTTCCE---EEEESSHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHhhccccccc---c-ccc-ccHHHHHHHHHHHHHHhCCCCcCE---EEEeCCchhHHHHHHHHHHHHh
Confidence            5899999998765321 11111   1 111 111244444445566666444332   2456888999999987663   


Q ss_pred             ----------------------CCC---CEEEEcCCCCCccccccccccccccccccce-----------EEEEEcccC-
Q 009673          190 ----------------------KPH---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----------FESMPYRLD-  232 (529)
Q Consensus       190 ----------------------~pG---D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-----------~~~v~~~v~-  232 (529)
                                            +||   |+|++.++.|.|+...       .+.+.|..           +..++++.. 
T Consensus       152 ~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~-------~~~~~g~~~~~~~~~~~~~~~~~~~p~~~  224 (472)
T 1ohv_A          152 RSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMG-------CLATTHSKAIHKIDIPSFDWPIAPFPRLK  224 (472)
T ss_dssp             HHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHH-------HHHHCCSCHHHHTTSCCCCCCEECCCCCC
T ss_pred             hhhccCcccccccccccccccccccCCCCeEEEECCCcccccHH-------HHhcCCCccccccCCCCCCCcccCCCccc
Confidence                                  156   8999999776443211       11111110           011122210 


Q ss_pred             -C--CC-------CCCCHHHHHHHhhhc-----CCcEEEEcCC-CCCC-CCC----HHHHHHHHHHhCCEEEEecccccc
Q 009673          233 -E--ST-------GLVDYDMLEKTAILF-----RPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISG  291 (529)
Q Consensus       233 -~--~~-------~~iD~d~le~~i~~~-----~pklIi~~~s-~~p~-~~d----~~~i~~ia~~~g~~livD~ah~~G  291 (529)
                       +  ..       ...|+++|+++++++     ++++|++... ++.+ ..+    +++|+++|++||++||+|++|. |
T Consensus       225 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g  303 (472)
T 1ohv_A          225 YPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQT-G  303 (472)
T ss_dssp             SSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTT-T
T ss_pred             CccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCccc-C
Confidence             0  00       023688999998763     6788888743 3333 556    9999999999999999999975 4


Q ss_pred             ccccccc----CCCCC-cccEEEeccccc-ccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHH
Q 009673          292 LVAASVV----ADPFK-YCDVVTTTTHKS-LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK  365 (529)
Q Consensus       292 li~~~~~----~~~~~-~aDiv~~S~hK~-l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~  365 (529)
                      +...+..    ...+. ..|+++  ++|+ ++   ||+++ ++      ++. .+......+..+++ ...+++..++|+
T Consensus       304 ~g~~g~~~~~~~~gv~~~~Di~t--~sK~~l~---GG~~~-~~------~~~-~~~~~~~~~T~~~~-~~~~aaa~aal~  369 (472)
T 1ohv_A          304 GGSTGKFWAHEHWGLDDPADVMT--FSKKMMT---GGFFH-KE------EFR-PNAPYRIFNTWLGD-PSKNLLLAEVIN  369 (472)
T ss_dssp             TTTTSSSSGGGGGCCSSCCSEEE--ECGGGSS---EEEEE-CG------GGS-CSSSSSSCCSSSSC-HHHHHHHHHHHH
T ss_pred             CCCCCCchhccccCCCCCCCEEE--Ecccccc---CCccC-ch------hhc-ccccccccCccCcc-HHHHHHHHHHHH
Confidence            3222210    00010 167765  5599 44   47776 44      442 12222122222333 334444445677


Q ss_pred             HhcCchHHHHHHHHHHHHHHHHHHHHhc--Cc----EEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCC
Q 009673          366 HAQSPEFKVYQNKVVSNCRALASRLVEL--GY----KLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPG  439 (529)
Q Consensus       366 ~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~----~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg  439 (529)
                      .+..+   ++.+++.+++++|.+.|++.  ++    ..+.+  ...++.+++.. ..+...+.+.|.+.||.+..    +
T Consensus       370 ~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~--~g~~~~~~~~~-~~~~~~~~~~l~~~Gv~~~~----~  439 (472)
T 1ohv_A          370 IIKRE---DLLSNAAHAGKVLLTGLLDLQARYPQFISRVRG--RGTFCSFDTPD-ESIRNKLISIARNKGVMLGG----C  439 (472)
T ss_dssp             HHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEE--ETTEEEEECSS-HHHHHHHHHHHHHTTEECEE----E
T ss_pred             HHHhC---CHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecC--CceEEEEEeCC-hhHHHHHHHHHHHCCeEEec----C
Confidence            55432   34677777888888888763  22    21222  23455556542 11234566777778999843    2


Q ss_pred             CCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          440 DKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       440 ~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                           ..+.|||+.+..    .+++|++++++.|++++.
T Consensus       440 -----g~~~iRi~~~~~----~t~e~i~~~~~~l~~~l~  469 (472)
T 1ohv_A          440 -----GDKSIRFRPTLV----FRDHHAHLFLNIFSDILA  469 (472)
T ss_dssp             -----TTTEEEECCCTT----CCHHHHHHHHHHHHHHHH
T ss_pred             -----CCCEEEEECCCC----CCHHHHHHHHHHHHHHHH
Confidence                 246899987654    458999999999998875

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=99.50  E-value=1e-11  Score=130.82  Aligned_cols=308  Identities=18%  Similarity=0.129  Sum_probs=171.6

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc--CC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP  191 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--~p  191 (529)
                      -.|+|.+|+...+......+.       .+....+++    +.+++++.-..    -....+||++|+..++....  ..
T Consensus       104 ~hp~v~~Av~~q~~~~~~~~~-------~~~~~~~la----e~l~~~~p~~~----~v~f~~SGsEA~e~AiklAr~~tg  168 (454)
T 4ao9_A          104 SAPEIRDAVIEAMQGGINLTG-------HNLLEGRLA----RLICERFPQIE----QLRFTNSGTEANLMALTAALHFTG  168 (454)
T ss_dssp             CCHHHHHHHHHHHHTCSCCCS-------EESSHHHHH----HHHHHHSTTCS----EEEEESSHHHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHhcCCCccC-------CcHHHHHHH----HHHHHhCCCCC----EEEEeCchHHHHHHHHHHHHhccc
Confidence            479999999887754332221       122223333    66777774322    12445899999999887542  23


Q ss_pred             CCEEEEcCCCCCcc-ccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcC--CcEEEEcC--CCCCCCC
Q 009673          192 HDRIMGLDLPHGGH-LSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR--PKLIIAGA--SAYPRDF  266 (529)
Q Consensus       192 GD~Vl~~~~~~~g~-~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~--pklIi~~~--s~~p~~~  266 (529)
                      .++|+..+-.|-|+ ...+...     ......+....++      .-|.+.+++.++++.  ..+||+..  .+.+...
T Consensus       169 r~~ii~~~~~yHG~t~~~~~~~-----~~~~~~~~~~~~p------~nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~  237 (454)
T 4ao9_A          169 RRKIVVFSGGYHGGVLGFGARP-----SPTTVPFDFLVLP------YNDAQTARAQIERHGPEIAVVLVEPMQGASGCIP  237 (454)
T ss_dssp             CCEEEEETTCBCSTTCBBSSSB-----CTTSCCSEEEEEC------TTCHHHHHHHHHHTGGGEEEEEECSEESTTTCEE
T ss_pred             CCeEEEEeCCcCCccccccccc-----cCccCCCCcccCC------CchHHHHHHHHhhcCCceEEEEeccccCCCCccC
Confidence            46787776554332 2111100     0011112233333      247899999887643  34566652  2233333


Q ss_pred             C----HHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEeccccccc-CCCCeEEEeeCCCcchhHHHhhh
Q 009673          267 D----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELESAI  340 (529)
Q Consensus       267 d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~-GprgG~i~~~~~~~~~~~l~~~i  340 (529)
                      +    +++|+++|++||++||+|++|. |-........-+. ..|+++.+  |.++ |...|.+.+++      ++.+.+
T Consensus       238 p~~~fL~~lr~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~gv~PDi~t~g--K~lggG~Piga~~~~~------ei~~~~  308 (454)
T 4ao9_A          238 GQPDFLQALRESATQVGALLVFDEVMT-SRLAPHGLANKLGIRSDLTTLG--KYIGGGMSFGAFGGRA------DVMALF  308 (454)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEECTTG-GGGSTTCHHHHHTCCCSEEEEE--GGGGTTSSCEEEEECH------HHHGGG
T ss_pred             CchhhHHHHHHHHhhcCCEEEEECCCc-CCCccccchhccCCCCcEEEec--cccCCCCcceeeeeHH------HHHHHH
Confidence            3    8999999999999999999985 5332211000001 25888755  9884 45568888887      677766


Q ss_pred             cccc----cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cCc--EEecCCCCCceEEEc
Q 009673          341 NNAV----FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGY--KLVSGGSDNHLVLVD  410 (529)
Q Consensus       341 ~~~~----~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~--~v~~~gt~~~~~~v~  410 (529)
                      ....    ..++.++... .++|..++|+.+.++   +..+++.++.++|.+.|++    .++  .+..-|   .++-+.
T Consensus       309 ~~~~~~~~h~~T~~gnPl-a~AAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G---~m~gi~  381 (454)
T 4ao9_A          309 DPRTGPLAHSGTFNNNVM-TMAAGYAGLTKLFTP---EAAGALAERGEALRARLNALCANEGVAMQFTGIG---SLMNAH  381 (454)
T ss_dssp             CTTTCSCCCCCTTTTCHH-HHHHHHHHHHHTSCH---HHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEET---TEEEEE
T ss_pred             hhccCCccccCCCCCCHH-HHHHHHHHHHHHhcc---ChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeeec---eEEEEE
Confidence            5321    1222333333 333333467777653   4566777778888887765    232  121111   122222


Q ss_pred             cCCC---------CCcH---HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          411 LRPM---------GIDG---ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       411 ~~~~---------~i~~---~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +...         ..+.   ..+...|.+.||.+.    |       .+.+.++++      ++++|+++++++|++++.
T Consensus       382 f~~~~~~~~~~~~~~d~~~~~~~~~~ll~~Gv~~~----p-------~~~~~~s~~------~T~~dId~~l~al~~~l~  444 (454)
T 4ao9_A          382 FVQGDVRSSEDLAAVDGRLRQLLFFHLLNEDIYSS----P-------RGFVVLSLP------LTDADIDRYVAAIGSFIG  444 (454)
T ss_dssp             SCCSCCCSGGGGTTCCHHHHHHHHHHHHHTTEECC----T-------TCEEECCTT------CCHHHHHHHHHHHHHHHH
T ss_pred             EecCCCCCHHHHHhhhHHHHHHHHHHHHHCCEEEc----C-------CCCEEEeCC------CCHHHHHHHHHHHHHHHH
Confidence            2110         1122   234455677899873    2       123444433      568999999999999987


Q ss_pred             HH
Q 009673          479 IT  480 (529)
Q Consensus       479 ~~  480 (529)
                      ..
T Consensus       445 ~~  446 (454)
T 4ao9_A          445 GH  446 (454)
T ss_dssp             HS
T ss_pred             hc
Confidence            53

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=99.21  E-value=3.3e-15  Score=158.38  Aligned_cols=319  Identities=13%  Similarity=0.071  Sum_probs=179.1

Q ss_pred             cceeEecCCC-----CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc-CCCCCCCceeeecCC
Q 009673          103 KSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF-NLDENKWGVNVQPLS  176 (529)
Q Consensus       103 ~~i~L~asen-----~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~-g~~~~~~~~~V~~~s  176 (529)
                      ..|++..+..     ..+|.|.+|+...+......+|+       ++...+++    +++++++ +.+.     .+..+|
T Consensus       101 ~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~~-------~~~~~~La----e~L~~~~p~~~~-----v~~~nS  164 (465)
T 2yky_A          101 AYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLSTQ-------TENEALFA----EAVCDRFPSIDL-----VRFTNS  164 (465)
Confidence            3466655443     23789999998776543222221       12223333    6777777 4332     244578


Q ss_pred             hHHHHHHHHHhh--cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh--cCC
Q 009673          177 GSPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL--FRP  252 (529)
Q Consensus       177 Gs~A~~~~l~al--l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~--~~p  252 (529)
                      |++|+..++...  ...+|+|+..+..|.|+.. +..  . .....|.....+.++      ..|+++|+++++.  .++
T Consensus       165 GseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~-~~~--s-g~~~~g~~~~~~~~~------~~d~~~l~~~l~~~~~~~  234 (465)
T 2yky_A          165 GTEANLMALATATAITGRKTVLAFDGGYHGGLL-NFA--S-GHAPTNAPYHVVLGV------YNDVEGTADLLKRHGHDC  234 (465)
Confidence            999999988765  2355999998876643311 100  0 000011100122222      2478899998873  378


Q ss_pred             cEEEEcCC-CCCC-CCC----HHHHHHHHHHhCCEEEEecccccccccccccC-CCCC-cccEEEeccccccc-CCCCeE
Q 009673          253 KLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DPFK-YCDVVTTTTHKSLR-GPRGGM  323 (529)
Q Consensus       253 klIi~~~s-~~p~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~-~~~~-~aDiv~~S~hK~l~-GprgG~  323 (529)
                      ++|++... ++++ ..+    +++|+++|++||++||+|++|. + ....... ..+. ..|++  |++|+++ |++.|+
T Consensus       235 aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~-r~g~~~a~~~~gv~pDi~--t~sK~lg~G~piG~  310 (465)
T 2yky_A          235 AAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-S-RLSGGGAQEMLGISADLT--TLGKYIGGGMSFGA  310 (465)
Confidence            88888642 3333 344    8999999999999999999987 4 2111000 0011 25665  6779984 577899


Q ss_pred             EEeeCCCcchhHHHhhhcc---c--ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcE
Q 009673          324 IFFKKDPVLGVELESAINN---A--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYK  396 (529)
Q Consensus       324 i~~~~~~~~~~~l~~~i~~---~--~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~  396 (529)
                      +++++      ++.+.+..   .  ...+..+++.. ..++..++|+.+.++   .+.+++.++.+++.+.|++.  .+.
T Consensus       311 v~~~~------~i~~~l~~~~~g~~~~~~T~~~npl-a~aAa~aaL~~l~~~---~~~~~~~~~~~~l~~~L~~~~~~~~  380 (465)
T 2yky_A          311 FGGRR------DLMERFDPARDGAFAHAGTFNNNIL-TMSAGHAALTQIYTR---QAASDLSASGDRFRANLNRIAVENQ  380 (465)
Confidence            99988      56666654   1  11122223222 333333356655432   45677777788888887663  222


Q ss_pred             Ee--cCCCCCceEEEccCCCCC---------c---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCC
Q 009673          397 LV--SGGSDNHLVLVDLRPMGI---------D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS  462 (529)
Q Consensus       397 v~--~~gt~~~~~~v~~~~~~i---------~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~  462 (529)
                      +.  ..+ ...++++.+....+         +   ...+.+.|.+.||.+.+    +.   +  . . ++   +   .++
T Consensus       381 ~~~~v~g-~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v~p----~~---~--~-~-~s---~---~~t  442 (465)
T 2yky_A          381 APLQFTG-LGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIYLAP----RG---M--Y-A-LS---L---EIA  442 (465)
Confidence            21  111 23344554432010         1   23466667789999843    21   0  0 1 22   1   266


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 009673          463 EKEFVAIADFIHEGVEI  479 (529)
Q Consensus       463 ~~d~~~la~~i~~~~~~  479 (529)
                      ++|+++++++|.++++.
T Consensus       443 ~edid~~l~~l~~~l~~  459 (465)
T 2yky_A          443 DAGRDAFAEALADFIGE  459 (465)
Confidence            89999999999888764

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=99.29  E-value=6.3e-09  Score=109.86  Aligned_cols=330  Identities=16%  Similarity=0.147  Sum_probs=169.8

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cC
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK  190 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~  190 (529)
                      .-.|+|.+|+...+.. +.+..   .++..++  ..++  ..+++.+++..+..+  ..+..+|||+|+..++...  ..
T Consensus        80 h~~p~v~~Ai~~q~~~-~~~~~---~~~~~~~--~~~~--lae~L~~~~p~~~~~--~v~f~~sGsEA~e~AlklAr~~t  149 (456)
T 4atq_A           80 ASDPAVVAAVQEAAAH-FTHTC---FMVTPYE--GYVA--VTEQLNRLTPGDHAK--RTVLFNSGAEAVENAVKVARLAT  149 (456)
T ss_dssp             TTCHHHHHHHHHHHHH-CSCCT---TTTSCCH--HHHH--HHHHHHHHSSCSSCE--EEEEESSHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHhh-ccCcc---cCccCcH--HHHH--HHHHHHHhCCCCCCc--EEEEeCChHHHHHHHHHHHhhhh
Confidence            3478899998776643 22211   1111122  2222  236677777543211  1244689999999888643  22


Q ss_pred             CCCEEEEcCCCCCcccccccc--c-----cccccccccceEEEEEccc--CCCC-CCCCHHHHHHHhh-------hcCCc
Q 009673          191 PHDRIMGLDLPHGGHLSHGFM--T-----PKRRVSGTSIYFESMPYRL--DEST-GLVDYDMLEKTAI-------LFRPK  253 (529)
Q Consensus       191 pGD~Vl~~~~~~~g~~s~g~~--~-----~~~~i~~~g~~~~~v~~~v--~~~~-~~iD~d~le~~i~-------~~~pk  253 (529)
                      ..++|+...-.|-|.-. +..  +     +.....-....+..++++.  .... ...+.+.+++.+.       ..++.
T Consensus       150 ~r~~ii~~~~~yHG~t~-~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iA  228 (456)
T 4atq_A          150 GRDAVVAFDHAYHGRTN-LTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVA  228 (456)
T ss_dssp             CCCEEEEETTCCCCSSH-HHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEE
T ss_pred             cCCeEEEEecccCCccc-cccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceE
Confidence            34678877655433210 000  0     0000000001112233322  1111 1223343333332       22456


Q ss_pred             EEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccc-c-CCCCC-cccEEEeccccccc-CCCCeE
Q 009673          254 LIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-V-ADPFK-YCDVVTTTTHKSLR-GPRGGM  323 (529)
Q Consensus       254 lIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~-~~~~~-~aDiv~~S~hK~l~-GprgG~  323 (529)
                      +||+..- ..++     ..-+++++++|++||++||+|+.+. |+--.|. . ...+. ..|+++.+  |.++ |...|.
T Consensus       229 AvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~t-G~GRtG~~~a~e~~gv~PDivt~g--K~lggg~P~~a  305 (456)
T 4atq_A          229 AIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQS-GFCRTGEWFAVDHEGVVPDIITMA--KGIAGGLPLSA  305 (456)
T ss_dssp             EEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTCCCSEEEEC--GGGGTTSSCEE
T ss_pred             EEEeccccCCCCccccchhhhHHHHHHHhhcCCceEeccccc-ccCCccccccccccCCCCchhhhh--hcccCcCCcee
Confidence            6777521 1222     2348999999999999999999964 3211111 0 00011 36998876  8884 455588


Q ss_pred             EEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----C---cE
Q 009673          324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----G---YK  396 (529)
Q Consensus       324 i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~----G---~~  396 (529)
                      +++++      ++.+.+......++.++......+|+ +.|+.+.++++   .+++.+..+++.+.|++.    .   .+
T Consensus       306 v~~~~------~i~~~~~~~~~~~Tf~gnpla~aaal-a~L~~i~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~~~~~  375 (456)
T 4atq_A          306 ITGRA------DLLDAVHPGGLGGTYGGNPVACAAAL-AAIDTMEQHDL---NGRARHIEELALGKLRELAAELSAGGGS  375 (456)
T ss_dssp             EEEEH------HHHTTSCTTSSCCSSSSCHHHHHHHH-HHHHHHHHTTH---HHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred             eEecH------HHHhcccccCCCCCCCCChHHHHhhH-HHHHHHhhccH---HHHHHHHHHHHHHHHHHHHHhcccccCC
Confidence            88887      67666655444444555344334444 46776654443   445555556666666542    1   12


Q ss_pred             EecC--CCCCceEEEccCCCC---Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHH
Q 009673          397 LVSG--GSDNHLVLVDLRPMG---ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVA  468 (529)
Q Consensus       397 v~~~--gt~~~~~~v~~~~~~---i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~  468 (529)
                      ++.+  |. .-+.-+++....   -+   ...+.+.|.+.|+.+...   |   + ....|||.-| ++   ++++|+++
T Consensus       376 ~v~~VRG~-Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~---g---~-~~~~irl~Pp-L~---it~~~id~  443 (456)
T 4atq_A          376 VVGDIRGR-GAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIILTC---G---T-YGNVIRLLPP-LV---ISDELLID  443 (456)
T ss_dssp             CEEEEEEE-TTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEE---C---T-TSCEEEECCC-TT---CCHHHHHH
T ss_pred             ceEEeeec-ceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEec---C---C-CCCEEEEECC-CC---CCHHHHHH
Confidence            2221  11 122333332111   11   234667778899987532   1   1 2357999744 44   57999999


Q ss_pred             HHHHHHHHHH
Q 009673          469 IADFIHEGVE  478 (529)
Q Consensus       469 la~~i~~~~~  478 (529)
                      +.+.|.++++
T Consensus       444 ~l~~l~~al~  453 (456)
T 4atq_A          444 GLEVLAAAIK  453 (456)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999999886

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=99.07  E-value=4.2e-09  Score=119.01  Aligned_cols=212  Identities=10%  Similarity=-0.017  Sum_probs=116.5

Q ss_pred             HHHHHHhhh-------cCCcEEEEcCC--CCCCC-C----CHHHHHHHHHHhCCEEEEecccccccccccccCC--CCC-
Q 009673          241 DMLEKTAIL-------FRPKLIIAGAS--AYPRD-F----DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-  303 (529)
Q Consensus       241 d~le~~i~~-------~~pklIi~~~s--~~p~~-~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~~-  303 (529)
                      ++|++.+++       .++.+||+...  +.++. .    -+++|+++|++||++||+|++|. |+--.|..-.  .+. 
T Consensus       577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~t-GfGRtG~~fa~e~~gv  655 (831)
T 4a0g_A          577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFT-GFWRLGVETTTELLGC  655 (831)
T ss_dssp             HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTT-TTTTTSBSSTHHHHSS
T ss_pred             HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCcc-ccccCCCchhhHhcCC
Confidence            567777752       23456777642  33332 2    28999999999999999999854 3321121100  001 


Q ss_pred             cccEEEecccccccC--CCCeEEEeeCCCcchhHHHhhhccc------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          304 YCDVVTTTTHKSLRG--PRGGMIFFKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       304 ~aDiv~~S~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      ..|+++  +.|.|+|  .+.|++++++      ++.+.+...      ...++.+++.....+++ ++|+.+.++++.+.
T Consensus       656 ~PDiit--lsK~L~gG~~Plgav~~~~------~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaal-a~L~~i~~~~l~~~  726 (831)
T 4a0g_A          656 KPDIAC--FAKLLTGGMVPLAVTLATD------AVFDSFSGDSKLKALLHGHSYSAHAMGCATAA-KAIQWFKDPETNHN  726 (831)
T ss_dssp             CCSEEE--ECGGGGTTSSCCEEEEECH------HHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHH-HHHHHHHCTTTCTT
T ss_pred             CCcEEE--EecccccCccCcEEEEECH------HHHHHHhcccccccceeecCCcccHHHHHHHH-HHHHHHHhhHHHHH
Confidence            257875  5699965  4669999988      677766432      12223344333333333 46776654333111


Q ss_pred             HHHHHH-H----HHHHHHHHHhc-CcEEecCCCCCceEEEccCCC-------CCcHHHHHHhHhcCCeEEcCCCCCCCCC
Q 009673          376 QNKVVS-N----CRALASRLVEL-GYKLVSGGSDNHLVLVDLRPM-------GIDGARVEKILDMASITLNKNSVPGDKS  442 (529)
Q Consensus       376 ~~~i~~-~----a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~-------~i~~~~~~~~L~~~GI~v~~~~~Pg~~~  442 (529)
                      .++..+ .    .+.+.+.+.+. .+.-+.+  ...+..+++...       ......+.+.|.+.||.+.    |+   
T Consensus       727 ~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg--~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~----p~---  797 (831)
T 4a0g_A          727 ITSQGKTLRELWDEELVQQISSHSAVQRVVV--IGTLFALELKADASNSGYASLYAKSLLIMLREDGIFTR----PL---  797 (831)
T ss_dssp             BCTTSSBBCCCSCHHHHHHHHHSTTEEEEEE--ETTEEEEEEC---------CHHHHHHHHHHHHTTEECC----CB---
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCceeEee--cccEEEEEEecCccccccchHHHHHHHHHHHHCCcEEE----ec---
Confidence            111000 0    11234445443 2322221  123344444211       1123457777888999984    32   


Q ss_pred             CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          443 ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       443 ~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                         ...|||..+..    ++++|++++++.|.++++
T Consensus       798 ---g~~lrl~pp~~----~t~e~id~~~~~l~~~l~  826 (831)
T 4a0g_A          798 ---GNVIYLMCGPC----TSPEICRRLLTKLYKRLG  826 (831)
T ss_dssp             ---TTEEEEECCTT----CCHHHHHHHHHHHHHHHT
T ss_pred             ---CCEEEEECCCC----CCHHHHHHHHHHHHHHHH
Confidence               36899987654    458999999999988775

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=98.98  E-value=1.2e-07  Score=100.60  Aligned_cols=325  Identities=12%  Similarity=0.075  Sum_probs=168.0

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----  189 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all----  189 (529)
                      -.|+|.+|+...+..- .. +  ..+++ ......++ + .+++.+++..+.+.   .....|||+|+..++....    
T Consensus        84 ~~p~v~~Ai~~q~~~l-~~-~--~~~~~-~~~~~~~~-l-Ae~L~~~~p~~~~~---v~f~~sGsEA~e~AiKlAr~~~~  153 (473)
T 4e3q_A           84 DHKGLIDAAKAQYERF-PG-Y--HAFFG-RMSDQTVM-L-SEKLVEVSPFDSGR---VFYTNSGSEANDTMVKMLWFLHA  153 (473)
T ss_dssp             CCHHHHHHHHHHHHHC-CC-C--CCCTT-EEEHHHHH-H-HHHHHHHSSCSSCE---EEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhc-cc-c--ccccc-ccCHHHHH-H-HHHHHhhCCCCccE---EEEeCchHHHHHHHHHHHHHHHH
Confidence            4799999988776432 11 0  01121 11112222 3 36778887654332   2346899999998886431    


Q ss_pred             ---CCC-CEEEEcCCCCCcccccccc-----ccccc--cccccceEEEEEccc--C-CCCCCC-------CHHHHHHHhh
Q 009673          190 ---KPH-DRIMGLDLPHGGHLSHGFM-----TPKRR--VSGTSIYFESMPYRL--D-ESTGLV-------DYDMLEKTAI  248 (529)
Q Consensus       190 ---~pG-D~Vl~~~~~~~g~~s~g~~-----~~~~~--i~~~g~~~~~v~~~v--~-~~~~~i-------D~d~le~~i~  248 (529)
                         +++ .+|+...-.|-|.- .+..     .+.+.  ....+  +..+++|.  . .+.+..       ..+++++.+.
T Consensus       154 ~~g~~~r~~ii~~~~~yHG~t-~~a~s~tg~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~  230 (473)
T 4e3q_A          154 AEGKPQKRKILTRWNAYHGVT-AVSASMTGKPYNSVFGLPLPG--FVHLTCPHYWRYGEEGETEEQFVARLARELEETIQ  230 (473)
T ss_dssp             HTTCTTCCEEEEETTCCCCSS-HHHHHHSCCGGGGGGTCSCTT--EEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             hcCCCCcceEEEeeceECCCc-cccccccccccccccCCCCCc--ccccCCCcccccccccchhhHHHHHHHHHHHHHHH
Confidence               344 46777765442220 0000     00000  00111  12222221  0 011111       1345566655


Q ss_pred             hcC---CcEEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccc
Q 009673          249 LFR---PKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSL  316 (529)
Q Consensus       249 ~~~---pklIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l  316 (529)
                      ...   ..+||+..- ..++     ..-+++|+++|++||++||+|+.+. |+--.+.. . .-+. ..|+++.+  |.+
T Consensus       231 ~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~t-GfGRtG~~fa~e~~gv~PDi~t~~--K~l  307 (473)
T 4e3q_A          231 REGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVIC-GFGRTGNTWGCVTYDFTPDAIISS--KNL  307 (473)
T ss_dssp             HHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTT-SSSTTSSSCHHHHTTCCCSEEEEC--GGG
T ss_pred             hhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccc-cCCcccchhHHHhcCCCCChHHhc--ccc
Confidence            433   345666521 1222     2238999999999999999999854 43111100 0 0011 36898866  998


Q ss_pred             cC--CCCeEEEeeCCCcchhHHHhhhccc-------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 009673          317 RG--PRGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA  387 (529)
Q Consensus       317 ~G--prgG~i~~~~~~~~~~~l~~~i~~~-------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~  387 (529)
                      +|  ...|.+++++      ++.+.+...       ...++.++......+|+ ++|+.+.+++   ..+++.+..++|.
T Consensus       308 ~gG~~Pl~av~~~~------~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaal-a~L~~i~~~~---l~~~~~~~g~~l~  377 (473)
T 4e3q_A          308 TAGFFPMGAVILGP------ELSKRLETAIEAIEEFPHGFTASGHPVGCAIAL-KAIDVVMNEG---LAENVRRLAPRFE  377 (473)
T ss_dssp             GTTSSCCEEEEECH------HHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHH-HHHHHHHHSS---HHHHHHHHHHHHH
T ss_pred             cCCCCCcccccccH------HHHHHhccccccccccccCCCCCCCcchhhhhh-hhhhhhcccc---HHHHHHHHHHHHH
Confidence            54  5668888887      565554321       11223334333333333 3577665443   3455666677788


Q ss_pred             HHHHhc----CcEEecCCCCCceEEEccCCC-----CC-----cHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEcc
Q 009673          388 SRLVEL----GYKLVSGGSDNHLVLVDLRPM-----GI-----DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS  453 (529)
Q Consensus       388 ~~L~~~----G~~v~~~gt~~~~~~v~~~~~-----~i-----~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~  453 (529)
                      +.|++.    .+.-+.+ . ..+.-+++...     ..     -...+.+.+.+.|+.+...          ...||+.-
T Consensus       378 ~~L~~l~~~~~v~~vRG-~-Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------g~~i~l~P  445 (473)
T 4e3q_A          378 ERLKHIAERPNIGEYRG-I-GFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPL----------GQSVVLCP  445 (473)
T ss_dssp             HHHHHHTTSTTEEEEEE-E-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEE----------TTEEEECC
T ss_pred             HHHHHHhcCCCeeEEee-c-ceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEec----------CCEEEEeC
Confidence            887662    2211111 0 11222332110     01     1345777888899987431          25789864


Q ss_pred             CCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          454 PAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       454 ~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                       .++   ++++|++++++.|.+++...
T Consensus       446 -PL~---it~~eid~~~~~l~~al~~v  468 (473)
T 4e3q_A          446 -PFI---LTEAQMDEMFDKLEKALDKV  468 (473)
T ss_dssp             -CTT---CCHHHHHHHHHHHHHHHHHH
T ss_pred             -CCC---CCHHHHHHHHHHHHHHHHHH
Confidence             444   67999999999999988754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	529
d1rv3a_	470	c.67.1.4 (A:) Serine hydroxymethyltransferase {Rab	0.0
d2a7va1	463	c.67.1.4 (A:26-488) Serine hydroxymethyltransferas	1e-174
d1dfoa_	416	c.67.1.4 (A:) Serine hydroxymethyltransferase {Esc	1e-161
d1kl1a_	405	c.67.1.4 (A:) Serine hydroxymethyltransferase {Bac	1e-157
d2v1pa1	467	c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptop	6e-48
d1ax4a_	465	c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanas	7e-40
d1c4ka2	462	c.67.1.5 (A:108-569) Ornithine decarboxylase major	1e-37
d1c7ga_	456	c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbi	1e-33
d1m6sa_	343	c.67.1.1 (A:) Low-specificity threonine aldolase {	2e-10
d2z67a1	434	c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (	2e-07
d2e7ja1	364	c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (	3e-07

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 470

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  515 bits (1326), Expect = 0.0
 Identities = 274/463 (59%), Positives = 339/463 (73%), Gaps = 11/463 (2%)

Query: 77  SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPG 136
             +   L ++D EV +II KE  RQ   LELIASENF SRAV+EA+GSCL NKYS G PG
Sbjct: 6   QMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLGYPG 65

Query: 137 KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIM 196
           +RYYGG E+IDELETLCQKRAL A+ LD   WGVNVQP SGSPANF VYTA+++PH RIM
Sbjct: 66  QRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIM 125

Query: 197 GLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256
           GLDLP GGHL+HGFMT K+++S TSI+FESM Y+++  TG +DYD LE+ A LF PKLII
Sbjct: 126 GLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLII 185

Query: 257 AGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL 316
           AG S Y R+ DY R+R+IAD  GA LM DMAHISGLV A VV  PF++C VVTTTTHK+L
Sbjct: 186 AGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTL 245

Query: 317 RGPRGGMIFFKKD---------PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA 367
           RG R GMIF+++            +   LES IN+AVFPGLQGGPHNH I G+AV LK A
Sbjct: 246 RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQA 305

Query: 368 QSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDM 427
            +PEFK YQ +VV+NCRAL++ LVELGYK+V+GGSDNHL+LVDLR  G DG R EK+L+ 
Sbjct: 306 MTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEA 365

Query: 428 ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAK-KL 486
            SI  NKN+ PGDKSAL P G+R+G+PA+T+RG  EK+F  +A FIH G+E+T++ +   
Sbjct: 366 CSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQDDT 425

Query: 487 VQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529
              + L++F   +   +      V  LR  VE+    FP+PG+
Sbjct: 426 GPRATLKEFKEKLAG-DEKHQRAVRALRQEVESFAALFPLPGL 467

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 463

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  498 bits (1283), Expect = e-174
 Identities = 274/456 (60%), Positives = 343/456 (75%), Gaps = 12/456 (2%)

Query: 82  SLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG 141
           SL ++DPE+ E++ +EK+RQ + LELIASENF SRA +EA+GSCL NKYSEG PGKRYYG
Sbjct: 7   SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 66

Query: 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP 201
           G E +DE+E LCQ+RAL AF+LD  +WGVNVQP SGSPAN  VYTA+L+PHDRIMGLDLP
Sbjct: 67  GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLP 126

Query: 202 HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261
            GGHL+HG+M+  +R+S TSI+FESMPY+L+  TGL+DY+ L  TA LFRP+LIIAG SA
Sbjct: 127 DGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSA 186

Query: 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG 321
           Y R  DY RMR++ D V A L+ DMAHISGLVAA V+  PFK+ D+VTTTTHK+LRG R 
Sbjct: 187 YARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARS 246

Query: 322 GMIFFKK-----DPVLGVEL----ESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372
           G+IF++K     DP  G E+    E  IN AVFP LQGGPHNH I  +AV LK A +P F
Sbjct: 247 GLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMF 306

Query: 373 KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITL 432
           + Y  +V+ N RA+A  L+E GY LVSGG+DNHLVLVDLRP G+DGAR E++L++ SIT 
Sbjct: 307 REYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITA 366

Query: 433 NKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKL 492
           NKN+ PGD+SA+ PGG+R+G+PA+T+R F E +F  + DFI EGV I LE K     +KL
Sbjct: 367 NKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKSKT--AKL 424

Query: 493 QDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 528
           QDF +F+   +      +A+LR RVE     FP+PG
Sbjct: 425 QDFKSFLLK-DSETSQRLANLRQRVEQFARAFPMPG 459

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]} Length = 416

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

 Score =  462 bits (1189), Expect = e-161
 Identities = 199/448 (44%), Positives = 272/448 (60%), Gaps = 38/448 (8%)

Query: 80  DYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRY 139
           + ++ + D E+ + + +EK RQ + +ELIASEN+TS  VM+A GS LTNKY+EG PGKRY
Sbjct: 4   EMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRY 63

Query: 140 YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLD 199
           YGG EY+D +E L   RA   F         NVQP SGS ANF VYTA+L+P D ++G++
Sbjct: 64  YGGCEYVDIVEQLAIDRAKELFGA----DYANVQPHSGSQANFAVYTALLEPGDTVLGMN 119

Query: 200 LPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259
           L HGGHL+HG       V+ +   +  +PY +D  TG +DY  LEK A   +PK+II G 
Sbjct: 120 LAHGGHLTHG-----SPVNFSGKLYNIVPYGIDA-TGHIDYADLEKQAKEHKPKMIIGGF 173

Query: 260 SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGP 319
           SAY    D+ +MR+IAD++GA L +DMAH++GLVAA V  +P  +  VVTTTTHK+L GP
Sbjct: 174 SAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGP 233

Query: 320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV 379
           RGG+I  K       +    +N+AVFPG QGGP  H I G AV LK A  PEFK YQ +V
Sbjct: 234 RGGLILAKGGSEELYK---KLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQV 290

Query: 380 VSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPG 439
             N +A+    +E GYK+VSGG+DNHL LVDL    + G   +  L  A+IT+NKNSVP 
Sbjct: 291 AKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPN 350

Query: 440 D-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNF 498
           D KS  V  GIR+G+PA+T RGF E E   +A ++ + ++   +   +            
Sbjct: 351 DPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDSINDEAVI------------ 398

Query: 499 VTSPNFSLMNNVADLRGRVEALTTQFPI 526
                         ++G+V  +  ++P+
Sbjct: 399 ------------ERIKGKVLDICARYPV 414

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]} Length = 405

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score =  451 bits (1162), Expect = e-157
 Identities = 203/440 (46%), Positives = 266/440 (60%), Gaps = 40/440 (9%)

Query: 83  LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
           L + DP+V   I +E++RQ   +ELIASENF SRAVMEA GS LTNKY+EG PG+RYYGG
Sbjct: 4   LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGG 63

Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH 202
            EY+D +E L ++RA   F         NVQP SG+ AN  VY  +L+  D ++G++L H
Sbjct: 64  CEYVDIVEELARERAKQLFGA----EHANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119

Query: 203 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262
           GGHL+HG       V+ + + +  + Y +D  T ++DYD + + A L RPKLI+A ASAY
Sbjct: 120 GGHLTHGSP-----VNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAY 174

Query: 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322
           PR  D+ + R+IAD VGA LM+DMAHI+GLVAA +  +P  Y   VTTTTHK+LRGPRGG
Sbjct: 175 PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGG 234

Query: 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382
           MI  ++           I+ A+FPG+QGGP  H I   AV    A   +FK Y  +VV N
Sbjct: 235 MILCQEQ------FAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDN 288

Query: 383 CRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD-K 441
            + LAS L   G+ LVSGG+DNHL+LVDLRP  + G   EK+LD   IT+NKN++P D +
Sbjct: 289 AKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPE 348

Query: 442 SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTS 501
           S  V  GIRIG+ A+TTRGF  +E   IA  I   ++                       
Sbjct: 349 SPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLK----------------------- 385

Query: 502 PNFSLMNNVADLRGRVEALT 521
            N      + + R RV ALT
Sbjct: 386 -NVGSEQALEEARQRVAALT 404

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]} Length = 467

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

 Score =  170 bits (432), Expect = 6e-48
 Identities = 61/461 (13%), Positives = 125/461 (27%), Gaps = 82/461 (17%)

Query: 92  EIITKEKERQFKSLELIASEN---FTSRAVM------EAVGSCLTNKYSEGLPGKRYYGG 142
           E + +      +   + +  N     S  V          G+   +  +  + G   + G
Sbjct: 13  EPVKRTTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGTGAVTQSMQAAMMRGDEAFSG 72

Query: 143 NEYIDELETLCQKRALAAFNLDENKWGVN--VQPLSGSPANFEVYTAILKPHDRIMGLDL 200
           +     L       ++         +G    +    G  A       ++K  ++  GLD 
Sbjct: 73  SRSYYALA-----ESVKNI------FGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDR 121

Query: 201 PHGGHLSHGFMTPKR---RVSGTS-----IYFESMPYRLDESTGLVDYDMLEKTAILFRP 252
                 S+ F    +   +++G +     I          +  G  D + LE+      P
Sbjct: 122 SKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGP 181

Query: 253 KLII---------AGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-------- 295
             +          +         +   M  IA      ++MD A  +             
Sbjct: 182 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEY 241

Query: 296 ------SVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQ 349
                  +  + +KY D++  +  K    P GG++  K D    V         +    +
Sbjct: 242 KDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVY---TECRTLCVVQE 298

Query: 350 GGPHNHTIGGLAVCLKHAQSPEF--KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 407
           G P    + G A+        +     +    ++  + L   L E    +V   +  H  
Sbjct: 299 GFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEE--IGVVCQQAGGHAA 356

Query: 408 LVDLRPMGID--------GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSP----- 454
            VD   +            A   ++  +A I   +            G            
Sbjct: 357 FVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRL 416

Query: 455 AMTTRGFSEKEFVAIADFIHE---------GVEITLEAKKL 486
            +    +++     I +             G+  T E K L
Sbjct: 417 TIPRATYTQTHMDFIIEAFKHVKENAANIKGLTFTYEPKVL 457

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]} Length = 465

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

 Score =  148 bits (374), Expect = 7e-40
 Identities = 58/421 (13%), Positives = 118/421 (28%), Gaps = 74/421 (17%)

Query: 122 VGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181
             +   ++++  + G   Y G+    +L+     +A   FN D       +    G  A 
Sbjct: 53  TNAMSDHQWAAMITGDEAYAGSRNYYDLK----DKAKELFNYDYI-----IPAHQGRGAE 103

Query: 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESM------PYRLDEST 235
             ++  +LK   +      P      H   T              +          D+  
Sbjct: 104 NILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWK 163

Query: 236 GLVDYDMLEKTA---------ILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 286
           G  D   L++            +       +         +   + +IA   G  ++MD 
Sbjct: 164 GDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDS 223

Query: 287 AHISGLVA--------------ASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVL 332
           A                       V+ D +KY D +T +  K      GG++  + +  +
Sbjct: 224 ARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIGGLVAIRDNEEI 283

Query: 333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE--FKVYQNKVVSNCRALASRL 390
                  +       ++G      + G  +        E   + Y +  +   + L  RL
Sbjct: 284 FT-----LARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRL 338

Query: 391 VELGYKLVSGGSDNHLVLVDLRPMGID--------GARVEKILDMASITLNKNSVP---- 438
            E G  +       H V VD + +            A +  +   + +   +        
Sbjct: 339 REAGIPIQYPT-GGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGR 397

Query: 439 ----GDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE---------GVEITLEAKK 485
               G++       +R+       R ++      IAD +           G+E   E   
Sbjct: 398 DPATGEQKHADMEFMRLTIA---RRVYTNDHMDYIADALIGLKEKFATLKGLEFEYEPPV 454

Query: 486 L 486
           L
Sbjct: 455 L 455

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]} Length = 462

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

 Score =  142 bits (357), Expect = 1e-37
 Identities = 55/417 (13%), Positives = 98/417 (23%), Gaps = 53/417 (12%)

Query: 102 FKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-------EYIDELETLC- 153
           FKSL+   S            G     K+  G     ++G              L  L  
Sbjct: 4   FKSLKEYVSRYLIQFDCPGHQGGQYYRKHPAGREFYDFFGETVFRADLCNADVALGDLLI 63

Query: 154 --------QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGH 205
                   +K A   +N D+            S AN  V +A++   D ++     H   
Sbjct: 64  HEGPAVAAEKHAARVYNADK----TYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSV 119

Query: 206 LSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK----------LI 255
            +        R            +         D   + + A    P+           +
Sbjct: 120 YNSALAMAGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAV 179

Query: 256 IAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISG----------LVAASVVADPFKYC 305
           I   +     ++   + +    +   +  D A +                     P    
Sbjct: 180 IQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPG 239

Query: 306 DVVTTTTHKSLRGPRGGMIFFKKD----PVLGVELESAINNAVFPGLQGGPHNHTIGGLA 361
            +V  + HK   G        KKD      L        NN+    +   P       L 
Sbjct: 240 IIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALD 299

Query: 362 VCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-------GYKLVSGGSDNHLVLVDLRPM 414
           V     +    +   + ++        +L++           +V+G         D+   
Sbjct: 300 VNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANN 359

Query: 415 GIDGARVEKILDMASITLNKNSVPGD--KSALVPGGIRIGSPAMTTRGFSEKEFVAI 469
                  +     A      N    D  K  L   GI   +      G         
Sbjct: 360 IDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANY 416

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]} Length = 456

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

 Score =  130 bits (328), Expect = 1e-33
 Identities = 58/407 (14%), Positives = 105/407 (25%), Gaps = 71/407 (17%)

Query: 130 YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVN--VQPLSGSPANFEVYTA 187
           ++  + G   Y G+E    LE     + +         +G    V    G  A   +   
Sbjct: 61  WAGMMIGDEAYAGSENFYHLE-----KTVKEL------FGFKHIVPTHQGRGAENLLSQL 109

Query: 188 ILKPHDRIMG---LDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLE 244
            +KP   + G             +G                          G +D + L 
Sbjct: 110 AIKPGQYVAGNMYFTTTRFHQEKNGA-----TFVDIVRDEAHDASLNLPFKGDIDLNKLA 164

Query: 245 K---------TAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHIS----- 290
                      A +     +           +   + ++A   G  +  D          
Sbjct: 165 TLIKEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYF 224

Query: 291 ---------GLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAIN 341
                     +    +V + F Y D  T +  K      GG +    D  +    +  + 
Sbjct: 225 IKEQEAGYENVSIKDIVHEMFSYADGCTMSGKKDCLVNIGGFLCM-NDEEMFSAAKELVV 283

Query: 342 NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG 401
                   GG     +  +A+ L+ A   E   Y    V   R L  +L E G  +V   
Sbjct: 284 VYEGMPSYGGLAGRDMEAMAIGLREAMQYE---YIEHRVKQVRYLGDKLREAGVPIVEPT 340

Query: 402 SDNHLVLVDLRPM--------GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS 453
              H V +D R              +    I     +   +  +     +   G      
Sbjct: 341 -GGHAVFLDARRFCPHLTQDQFPAQSLAASIYMETGVRSMERGIVSAGRSKETGENHRPK 399

Query: 454 P-----AMTTRGFSEKEFVAIADFIHE---------GVEITLEAKKL 486
                  +  R ++      +AD I +         G+    E K+L
Sbjct: 400 LETVRLTIPRRVYTYAHMDVVADGIIKLYQHKEDIRGLTFVYEPKQL 446

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]} Length = 343

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

 Score = 60.2 bits (144), Expect = 2e-10
 Identities = 58/357 (16%), Positives = 110/357 (30%), Gaps = 42/357 (11%)

Query: 109 ASENFT--SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN 166
            S+  T  +  + +A+        ++   G   YG +  I+ELE     R  A       
Sbjct: 5   RSDTVTKPTEEMRKAM--------AQAEVGDDVYGEDPTINELE-----RLAAET---FG 48

Query: 167 KWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES 226
           K      P SG+  N     A  +  D ++     H      G M     V    +  ++
Sbjct: 49  KEAALFVP-SGTMGNQVSIMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGKN 107

Query: 227 MPYRLDESTGLVDYDMLE--KTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMM 284
                D+    +    +   +T+++                 +   +  IA   G  + +
Sbjct: 108 GAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHI 167

Query: 285 DMAHISGLVAASVV--ADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINN 342
           D A I     AS V   +   Y D V     K L  P G ++   +D             
Sbjct: 168 DGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDRD----------FIE 217

Query: 343 AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS 402
                 +         G+          +      +   N R LA +L E+GY +     
Sbjct: 218 RARKARKMLGGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKEIGYSVNPEDV 277

Query: 403 DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTR 459
             ++V++    + ++     + L  + +  N         A+    IR+ +    +R
Sbjct: 278 KTNMVILRTDNLKVNAHGFIEALRNSGVLAN---------AVSDTEIRLVTHKDVSR 325

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]} Length = 434

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

 Score = 51.1 bits (121), Expect = 2e-07
 Identities = 46/307 (14%), Positives = 91/307 (29%), Gaps = 39/307 (12%)

Query: 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP 201
           G   +  L     +       L+ +       P+S   +     +A  K +   + +   
Sbjct: 107 GASIMYALTNKILESFFKQLGLNVHAIAT---PISTGMSISLCLSAARKKYGSNVVI--- 160

Query: 202 HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEK-----TAILFRPKLII 256
              + SH          G ++    +   LD     V  + +E        +  RP ++ 
Sbjct: 161 -YPYASHKSPIKAVSFVGMNMRL--VETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLS 217

Query: 257 AGASAYPRD-FDYPRMRQIADAVGALLMMDMAHISGLVAAS--VVADPFKYCDVVTTTTH 313
                 PR+  D   + +I +      +++ A+          +        D V +++ 
Sbjct: 218 TLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVDAVVSSSD 277

Query: 314 KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373
           K+L  P GG + +  D              +     G      +    V L    S  + 
Sbjct: 278 KNLLTPIGGGLVYSTDA--------EFIKEISLSYPGRASATPVVNTLVSLLSMGSKNYL 329

Query: 374 VYQNKVVSNCRALASRLVEL----GYKL----------VSGGSDNHLVLVDLRPMGIDGA 419
                  ++ + L   L +L    G K           +S  SD   +   L  + + G 
Sbjct: 330 ELVKNQKNSKKLLDELLNDLSKKTGGKFLDVESPIASCISVNSDPVEIAAKLYNLRVTGP 389

Query: 420 RVEKILD 426
           R  K  D
Sbjct: 390 RGIKKTD 396

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]} Length = 364

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 50.2 bits (118), Expect = 3e-07
 Identities = 56/385 (14%), Positives = 120/385 (31%), Gaps = 31/385 (8%)

Query: 101 QFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELET--LCQK--R 156
            F +++ + +    +    +A+      ++ +G     +      +DE++T  +      
Sbjct: 1   DFINIDPLQTGGKLTEEARQAL-----LEWGDGYSVCDFCTTG-RLDEIKTPPIHDFIHN 54

Query: 157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRR 216
            L  F          V       A F V  ++ K    ++  +  H              
Sbjct: 55  QLPKF---LGCDVARVTN-GAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNI 110

Query: 217 VSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIAD 276
                  +       +     ++        +L    LI      Y    D  ++ ++  
Sbjct: 111 ALVPKTDYPDYAITPENFAQTIEETKKRGEVVLA---LITYPDGNYGNLPDVKKIAKVCS 167

Query: 277 AVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVEL 336
                L+++ A+  G +  S+        D +  + HKS+       +   K+    + L
Sbjct: 168 EYDVPLLVNGAYAIGRMPVSL---KEIGADFIVGSGHKSMAASGPIGVMGMKEEWAEIVL 224

Query: 337 ESAIN--NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG 394
             +    N     L       TI  L     H +  E     ++ V   R  A+ + +LG
Sbjct: 225 RRSEKYKNKEVELLGCTARGATIITLMASFPHVR--ERIKRWDEEVEKARRFAAEMEKLG 282

Query: 395 YKLVSGGSDNHLVLVDLRPMGID-GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS 453
            K +     NH ++     +  +   + +         L    + G K    PG  R   
Sbjct: 283 IKQLGDNPHNHDLMFFHAEVLYEISKKAKGGRFFLYRELKSRKIHGIK----PGLTRYFK 338

Query: 454 PAMTTRGFSEKEFVAIADFIHEGVE 478
             ++T G S++E   + +   E +E
Sbjct: 339 --LSTYGLSDEEVDYVLNAFKEIIE 361

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	529
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	100.0
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	100.0
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	100.0
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	100.0
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	99.97
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	99.96
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	99.96
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.95
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	99.95
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.95
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.95
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	99.95
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.95
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	99.94
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.94
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	99.94
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.94
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	99.94
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.93
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	99.93
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	99.93
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	99.93
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	99.93
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	99.93
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.93
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	99.92
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	99.92
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.92
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.92
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	99.91
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.91
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	99.91
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	99.91
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.91
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.91
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	99.91
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.9
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.9
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	99.9
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	99.89
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	99.89
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.89
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.88
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	99.88
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.88
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.87
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.87
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.87
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	99.86
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	99.85
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	99.85
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.85
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.83
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	99.83
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	99.83
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	99.83
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	99.82
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	99.82
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.82
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	99.81
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	99.77
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	99.77
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	99.77
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	99.75
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	99.73
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	99.72
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.7
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	99.7
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	99.7
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	99.7
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	99.68
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.65
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.64
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	99.61
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	99.6
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	99.6
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	99.54
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	99.44
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	99.41
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	99.39
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	99.31
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	99.25
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	99.17
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.09
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	99.06
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	98.93

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=5.5e-95  Score=749.63  Aligned_cols=453  Identities=60%  Similarity=1.009  Sum_probs=426.6

Q ss_pred             cchhhhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHH
Q 009673           76 SSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK  155 (529)
Q Consensus        76 ~~~~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~  155 (529)
                      +.+++++|++.|||++++|++|..||+++|+||||||++|+.|++++++.|+|+|+|||||.|||+|++++|++|.+|++
T Consensus         5 ~~~~~~~l~~~D~ei~~~i~~e~~rq~~~l~LIaSEN~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~   84 (470)
T d1rv3a_           5 EQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQK   84 (470)
T ss_dssp             HHHTTSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHH
T ss_pred             HHHHhhhHhhhCHHHHHHHHHHHHHHHcCceEecCCCcCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHH
Confidence            45678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCC
Q 009673          156 RALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST  235 (529)
Q Consensus       156 ~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~  235 (529)
                      +++++||++++.|.+|||+.||+.||++++.+|++|||+||.+++.+|||++||+......+++.+.+++.+.|++++++
T Consensus        85 ra~~lF~~~~~~~~anVqp~SGs~An~av~~all~pgD~im~~~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~v~~~~  164 (470)
T d1rv3a_          85 RALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDT  164 (470)
T ss_dssp             HHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTT
T ss_pred             HHHHHhCCChhhccccccccCCccHHHHHHHHhcCCCCeEeeeccccCCcccccccccCCCcccccceeEeeEEEEeccc
Confidence            99999999988899999999999999999999999999999999999999999987776778888999999999999989


Q ss_pred             CCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccccc
Q 009673          236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKS  315 (529)
Q Consensus       236 ~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~  315 (529)
                      +.||+|++++.++.+|||+|+++.|+||+.+|++++++||++.|++|++|++|.+|+|+.+.+++|++++|||++||||+
T Consensus       165 ~~IDyd~l~~~a~~~kPklIi~G~S~y~r~~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sPl~~aDvvt~tTHKt  244 (470)
T d1rv3a_         165 GYIDYDRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKT  244 (470)
T ss_dssp             CSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSGG
T ss_pred             CcccHHHHHHHHHhhCcceEeechhhccccCCHHHHHHHHhccCCeEEecchhhhhhccccccCChhheeeeeeeehhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCeEEEeeCCCc---------chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 009673          316 LRGPRGGMIFFKKDPV---------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL  386 (529)
Q Consensus       316 l~GprgG~i~~~~~~~---------~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l  386 (529)
                      |+|||||+|+++++..         ..+++.++|++++||++||+||++.+||++++|+++.+++|++|++++++|++.|
T Consensus       245 lrGPrgGiI~~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~~~IAa~Ava~~ea~~~~fk~Ya~qvv~NAk~L  324 (470)
T d1rv3a_         245 LRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRAL  324 (470)
T ss_dssp             GCCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred             ccCCcceEEEEccccccccccccchhHHHHHHHHhhhcCccccccchhhHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence            9999999999987421         1235889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHH
Q 009673          387 ASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEF  466 (529)
Q Consensus       387 ~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~  466 (529)
                      ++.|.+.|+++++++|++|++++|+++.++++..+++.|+++||.+|++.+|+|.+++.++||||||+++|+|||+++||
T Consensus       325 a~~L~~~G~~v~~ggTdnHlvlvdl~~~g~~g~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~alTtrG~~e~dm  404 (470)
T d1rv3a_         325 SAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDF  404 (470)
T ss_dssp             HHHHHHTTCEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHH
T ss_pred             HHHHHhCCceeccCCCCCceEEEeecccCCcHHHHHHHHHHcCcEECCCcCCCCCCCCCCCeeEecCHHHHhCCCCHHHH
Confidence            99999999999999999999999999889999999999999999999999999988889999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcc-cchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 009673          467 VAIADFIHEGVEITLEAKKLVQG-SKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV  529 (529)
Q Consensus       467 ~~la~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~  529 (529)
                      ++++++|.++++.++++|.+++. .+++||++.+..+. .....+++||++|.+||++||+|||
T Consensus       405 ~~iA~~I~~~l~~~~~~~~~~g~~~~~~ef~~~~~~~~-~~~~~i~~lr~eV~~l~~~FPlPg~  467 (470)
T d1rv3a_         405 QKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGDE-KHQRAVRALRQEVESFAALFPLPGL  467 (470)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHSCH-HHHHHHHHHHHHHHHHHTTSCCCSS
T ss_pred             HHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHhhccc-ccHHHHHHHHHHHHHHHHcCCCCCC
Confidence            99999999999999999887732 35789998886543 1123689999999999999999996

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=1.4e-94  Score=744.01  Aligned_cols=448  Identities=60%  Similarity=1.022  Sum_probs=381.8

Q ss_pred             hhhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 009673           79 VDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL  158 (529)
Q Consensus        79 ~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la  158 (529)
                      .+++|++.|||++++|++|..||+++|+||||||++|+.|++++++.|+|+|+|||||.|||+|++++|++|.+|+++++
T Consensus         4 ~~~~L~~~D~ei~~~i~~e~~rq~~~l~LiaSEN~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~   83 (463)
T d2a7va1           4 GQESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRAL   83 (463)
T ss_dssp             SCCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHH
T ss_pred             ccCchhhhCHHHHHHHHHHHHHHhcCeeEeccCCcCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHH
Confidence            45779999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCC
Q 009673          159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV  238 (529)
Q Consensus       159 ~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~i  238 (529)
                      ++||+++++|+||||+.||+.||++++.+|++|||+||.+++++|||++||+......+++.|..++.++|+++++++.|
T Consensus        84 ~lF~~~~a~w~vNVqp~SGs~An~av~~all~pgD~Im~l~l~~GGHlshg~~~~~~~~~~~g~~~~~~~Y~~d~~~~~I  163 (463)
T d2a7va1          84 EAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLI  163 (463)
T ss_dssp             HHTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSB
T ss_pred             HHhCCCchhccCCccccccHHHHHHHHHHHcCCCceEEeeccCcCcccccccccccccccceeeEeeeeeeeccCCCCcC
Confidence            99999999999999999999999999999999999999999999999999987665677889999999999999889999


Q ss_pred             CHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccC
Q 009673          239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG  318 (529)
Q Consensus       239 D~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~G  318 (529)
                      |+|++++.+..+|||+|+++.|+||+.+|++++++||++.|++|++|++|.+|+|+.+.+++|++++|+|++||||+|+|
T Consensus       164 Dyd~~~~~a~~~kPklIi~G~S~y~r~~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sP~~~aDvvt~tTHKTlrG  243 (463)
T d2a7va1         164 DYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRG  243 (463)
T ss_dssp             CHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCS
T ss_pred             cHHHHHHHHhhcCCceEEecccccccccCHHHHHHHhhcccceEEechhhhhHHhhhhhhcChhhhhhhhhchhhhhhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeCCCc---------chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Q 009673          319 PRGGMIFFKKDPV---------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR  389 (529)
Q Consensus       319 prgG~i~~~~~~~---------~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~  389 (529)
                      ||||+|+++++..         ..+++.++|++++||+.||+||++.+||++++|+++.+++|++|++++++|++.|++.
T Consensus       244 PrgGiIl~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~h~iAa~Ava~~ea~~~~fk~Ya~qVv~NAk~La~~  323 (463)
T d2a7va1         244 ARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADA  323 (463)
T ss_dssp             CSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEcccccccccccCccchhHHHHHhhhhcCcccchhhhhhhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence            9999999987420         1126788999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHH
Q 009673          390 LVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI  469 (529)
Q Consensus       390 L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~l  469 (529)
                      |.+.|+++++++|++|++++|+++.++++..+++.|+++||.+|++.+|+|.+++.++||||||+++|+|||+++||+++
T Consensus       324 L~~~G~~vv~ggTdnHlvlvdl~~~~~~G~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~a~TtrG~~e~dm~~i  403 (463)
T d2a7va1         324 LLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRV  403 (463)
T ss_dssp             HHHTTCEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHH
T ss_pred             HHhCCCeeecCCCCCceeeeeccccCCCHHHHHHHHHhccCccCCccCCCCCCCCCCCceEeCCHHHHhCCCCHHHHHHH
Confidence            99999999999999999999999989999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 009673          470 ADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV  529 (529)
Q Consensus       470 a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~  529 (529)
                      +++|.+++....++|+++ + +++||...+..+. .....+++||++|.+||++||+|||
T Consensus       404 A~~I~~~l~~~~~~~~~~-~-~~~df~~~~~~~~-~~~~~i~~lr~~V~~l~~~fP~pg~  460 (463)
T d2a7va1         404 VDFIDEGVNIGLEVKSKT-A-KLQDFKSFLLKDS-ETSQRLANLRQRVEQFARAFPMPGF  460 (463)
T ss_dssp             HHHHHHHHHHHHHHHHHC-C-SHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHTTSCCSSC
T ss_pred             HHHHHHHHHHhhhhhhhh-h-hhHHHHHHHhcCc-ccHHHHHHHHHHHHHHHHhCCCCCC
Confidence            999999999999998876 4 6789987663322 0113689999999999999999997

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.1e-88  Score=690.63  Aligned_cols=410  Identities=49%  Similarity=0.798  Sum_probs=389.0

Q ss_pred             hhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673           81 YSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA  160 (529)
Q Consensus        81 ~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~  160 (529)
                      ..|++.|||+++++++|..||+++|+||||||++|+.|++++++.|+|+|+|||||.|||+|++++|++|.+|+++++++
T Consensus         5 ~~l~~~D~ei~~~i~~e~~rq~~~i~LiaSEN~~S~~v~~a~~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~l   84 (416)
T d1dfoa_           5 MNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKEL   84 (416)
T ss_dssp             CCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHH
T ss_pred             CChhhcCHHHHHHHHHHHHHHHcCceEecCcccCCHHHHHHhcCcccCcccCCCCCCcccCCChhHHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCH
Q 009673          161 FNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY  240 (529)
Q Consensus       161 ~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~  240 (529)
                      ||++.    +|||++||+.||++++.+|++|||+||.+++.+|||++||+     .+++.|.+++.++|+++ +++.||+
T Consensus        85 F~a~~----anVqp~SGs~AN~av~~All~pGD~Il~l~l~~GGHlshg~-----~~~~~g~~~~~~~y~~d-~~~~IDy  154 (416)
T d1dfoa_          85 FGADY----ANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGS-----PVNFSGKLYNIVPYGID-ATGHIDY  154 (416)
T ss_dssp             HTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECTTTTCCGGGTC-----TTSHHHHHSEEEEECBC-SSSSBCH
T ss_pred             hCCCc----ceeecccCccHHHHHHHHhcCCCCeeeeccccccccccccc-----cccccCceEEEEecccC-CccCccH
Confidence            99976    79999999999999999999999999999999999999997     57788999999999998 4788999


Q ss_pred             HHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCC
Q 009673          241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPR  320 (529)
Q Consensus       241 d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gpr  320 (529)
                      |++++.++.+|||+|+++.|+||+.+|++++++||+++|++|++|++|.+|+++.+.+++|++++|+|++||||+|+|||
T Consensus       155 d~l~~~a~~~kPklIi~G~S~y~r~~d~~~~reiad~vga~l~~D~aH~~GLIa~g~~~sP~~~aDvvt~tThKtlrGPr  234 (416)
T d1dfoa_         155 ADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPR  234 (416)
T ss_dssp             HHHHHHHHHHCCSEEEEECSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCCTTTSSEEEEESSSTTCCCS
T ss_pred             HHHHHHHHHhccceEEecccccccccCHHHHHHHHHhcCceEEcchhhhhcceeccccCCcccccceeeeehhhcccCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC
Q 009673          321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG  400 (529)
Q Consensus       321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~  400 (529)
                      ||+|+++++.   .++.++|++++||+.||+|+++.+||++++|+++++++|++|.+++++|++.|++.|.+.|++++++
T Consensus       235 ggiI~~~~~~---~~~~~~i~~avfPg~qggp~~~~iaa~Aval~Ea~~~~fk~Y~~qvv~NA~~La~~L~~~G~~iv~g  311 (416)
T d1dfoa_         235 GGLILAKGGS---EELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSG  311 (416)
T ss_dssp             CEEEEESSCC---HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGG
T ss_pred             ceEEEeccch---HhHHHHHHhhhCcccccCccHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhCCcccccC
Confidence            9999998531   1688899999999999999999999999999999989999999999999999999999999999999


Q ss_pred             CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          401 GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       401 gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +|++|++++|+++.++++.++++.|+++||.+|++.+|+|. +++.++||||||+++|+|||+++||++++++|.++++.
T Consensus       312 gTdnHlvlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~d~~~iA~~I~~~l~~  391 (416)
T d1dfoa_         312 GTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDS  391 (416)
T ss_dssp             SCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred             CCCCceeEEEecccCCCHHHHHHHHHHcCeEEeCCcCCCCCCCCCCCCceEeCCHHHHhCCCCHHHHHHHHHHHHHHHHc
Confidence            99999999999988999999999999999999999999996 78999999999999999999999999999999999873


Q ss_pred             HHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCC
Q 009673          480 TLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIP  527 (529)
Q Consensus       480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~  527 (529)
                      .                    +++    ..+++||++|.+||++||++
T Consensus       392 ~--------------------~~~----~~~~~ir~~V~~l~~~fPly  415 (416)
T d1dfoa_         392 I--------------------NDE----AVIERIKGKVLDICARYPVY  415 (416)
T ss_dssp             T--------------------TCH----HHHHHHHHHHHHHHHHSCSB
T ss_pred             C--------------------CcH----HHHHHHHHHHHHHHHcCCCC
Confidence            2                    122    36899999999999999986

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=100.00  E-value=8.4e-88  Score=682.83  Aligned_cols=403  Identities=50%  Similarity=0.815  Sum_probs=384.8

Q ss_pred             hhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673           81 YSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA  160 (529)
Q Consensus        81 ~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~  160 (529)
                      +.|.+.|||++++|++|..||+++|+||||||++|+.|++++++.|+|+|+|||||.|||+|++++|++|.+|+++++++
T Consensus         2 ~~l~~~D~ei~~~i~~e~~rq~~~l~LiaSEN~~S~~v~~a~~S~l~nkyaeG~pg~ryy~G~~~id~iE~la~~ra~~l   81 (405)
T d1kl1a_           2 KYLPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQL   81 (405)
T ss_dssp             CHHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHH
T ss_pred             chhhhhCHHHHHHHHHHHHHHHcCceEeccCCcCCHHHHHHhcCcccCcCcCCCCCccccCCchhHHHHHHHHHHHHHHH
Confidence            35788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCH
Q 009673          161 FNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY  240 (529)
Q Consensus       161 ~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~  240 (529)
                      ||+++    +|||++||+.||++++.+|++|||+||.+++++|||++||.     ..+..|.+++++.|++|++++.||+
T Consensus        82 F~a~~----anVqp~SGs~An~av~~all~pGD~im~l~l~~GGHlshg~-----~~~~~g~~~~~~~y~~d~~~~~ID~  152 (405)
T d1kl1a_          82 FGAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGS-----PVNFSGVQYNFVAYGVDPETHVIDY  152 (405)
T ss_dssp             HCCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTC-----TTSHHHHHSEEEEECBCTTTCSBCH
T ss_pred             hCCCc----ceeeccCchHHHHHHHHHhcCCCCEEEEeecccccccccCc-----cccccceEEEEEEeccchhcccccH
Confidence            99976    79999999999999999999999999999999999999996     5677888899999999988999999


Q ss_pred             HHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCC
Q 009673          241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPR  320 (529)
Q Consensus       241 d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gpr  320 (529)
                      |++++.++.+|||+|+++.|+||+.+|++++++||++.|++|++|++|.+|+++.+.+++|++++|+|++||||+|+|||
T Consensus       153 d~l~~~a~~~kPklIi~G~S~y~r~~d~~~~reIad~vga~l~~D~aH~~GLIa~g~~~~P~~~aDvvt~tThKtlrGPr  232 (405)
T d1kl1a_         153 DDVREKARLHRPKLIVAAASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPR  232 (405)
T ss_dssp             HHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCS
T ss_pred             HHHHHHHHhhCcceEEecccccccccChHHHHHHHhhhCCEEecchhhHhhhhhhhhcCChhhhhhheeccccccccCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC
Q 009673          321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG  400 (529)
Q Consensus       321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~  400 (529)
                      ||+|++++      ++.+++++++||+.||+|+++.+||++++|+++.+++|++|++++++|++.|++.|.+.|++++++
T Consensus       233 gg~I~~~~------~~~~~i~~avfPg~qggp~~~~iAa~Aval~Ea~~~~fk~Ya~qvv~NAkaLa~~L~~~G~~vv~g  306 (405)
T d1kl1a_         233 GGMILCQE------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSG  306 (405)
T ss_dssp             CEEEEECH------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGG
T ss_pred             CceEEecc------hhHHHHHhhhCcccccCcchhHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCCceeecC
Confidence            99999998      899999999999999999999999999999998889999999999999999999999999999999


Q ss_pred             CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          401 GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       401 gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +|++|++++|+++.++++..+++.|+++||.+|++.+|+|. +++.++||||||+++|+|||+++||++++++|.++++.
T Consensus       307 gTd~H~vlvdl~~~~~~g~~ae~~Le~agI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~dm~~ia~~I~~~l~~  386 (405)
T d1kl1a_         307 GTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKN  386 (405)
T ss_dssp             SCSSSEEEEECGGGTCCHHHHHHHHHHHTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTC
T ss_pred             CCccceeeccccccCCcHHHHHHHHHHcCeEEcCCcCCCCCCCCCCCCceeecCHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence            99999999999988999999999999999999999999996 78899999999999999999999999999999998863


Q ss_pred             HHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHh
Q 009673          480 TLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTT  522 (529)
Q Consensus       480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  522 (529)
                      .                   + ++    ..++++|++|.+||.
T Consensus       387 ~-------------------~-~~----~~~~~ir~~V~~L~~  405 (405)
T d1kl1a_         387 V-------------------G-SE----QALEEARQRVAALTD  405 (405)
T ss_dssp             T-------------------T-CH----HHHHHHHHHHHHHHC
T ss_pred             C-------------------C-cH----HHHHHHHHHHHHhhC
Confidence            2                   1 12    368899999999983

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=2.4e-29  Score=258.95  Aligned_cols=357  Identities=18%  Similarity=0.152  Sum_probs=241.4

Q ss_pred             hhhcccCChHHHHHHHHH-HHHh---hcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHH
Q 009673           80 DYSLGEADPEVCEIITKE-KERQ---FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC  153 (529)
Q Consensus        80 ~~~l~~~d~~~~~~~~~e-~~~~---~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a  153 (529)
                      .+++..+.|.....+.+. .+.+   ++.|+|..+++  ++|+.|++++...+.+.. .+|+..   .|   ..++++.+
T Consensus         5 ~~r~~~~~~s~~~~i~~~a~~~~~~G~~vi~l~~g~p~~~~p~~i~~a~~~~~~~~~-~~Y~~~---~G---~~~lR~~i   77 (382)
T d1b5pa_           5 SRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGK-TKYAPP---AG---IPELREAL   77 (382)
T ss_dssp             CHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CSCCCT---TC---CHHHHHHH
T ss_pred             HHHHHhCCCCHHHHHHHHHHHHHhCCCCeEECCCCCCCCCCCHHHHHHHHHHHhcCC-cCCCCC---CC---CHHHHHHH
Confidence            455666666644333322 2222   24688888775  468999999988776432 244431   12   23566666


Q ss_pred             HHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC
Q 009673          154 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD  232 (529)
Q Consensus       154 ~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~  232 (529)
                      .+++.+.+|.+.+.  .+|.+|+|+ +|+..++.++++|||.|++++|.|.++..        .+...|.  +++.++.+
T Consensus        78 a~~~~~~~~~~~~~--~~i~it~G~~~al~~~~~~l~~~gd~vl~~~P~y~~~~~--------~~~~~g~--~~~~v~~~  145 (382)
T d1b5pa_          78 AEKFRRENGLSVTP--EETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPE--------MVRFAGG--VVVEVETL  145 (382)
T ss_dssp             HHHHHHTTCCCCCG--GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTC--EEEEEECC
T ss_pred             Hhhhhhhccccccc--ccceecCCHHHHHHHHHHHhCCCCCEEEECCCCcHHHHH--------HHHHhcC--eEEEEecc
Confidence            68888888776432  256678887 99999999999999999999998765431        3344565  66666655


Q ss_pred             CC-CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC---
Q 009673          233 ES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK---  303 (529)
Q Consensus       233 ~~-~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~---  303 (529)
                      ++ ++.+|++++++.+++ +++++++++|+||+  ..   ++++|.++|++||++||+|++| ..+.+.+....+..   
T Consensus       146 ~~~~~~~d~~~l~~~~~~-~~~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~  223 (382)
T d1b5pa_         146 PEEGFVPDPERVRRAITP-RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIY-EHLLYEGEHFSPGRVAP  223 (382)
T ss_dssp             GGGTTCCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTT-TTCBSSSCCCCGGGTCT
T ss_pred             cccccCCCHHHHHHhCCC-CCeEEEECCCCCCcchhCCHHHHHHHHHHHHHcCeEEEEEccc-cceecCCCCCCHHHcCC
Confidence            43 478999999999877 88999999999997  33   5778889999999999999984 46565443333322   


Q ss_pred             cccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHH--HhcCchHHHHHHHH
Q 009673          304 YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK--HAQSPEFKVYQNKV  379 (529)
Q Consensus       304 ~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~--~~~~~~~~~~~~~i  379 (529)
                      .-.+++.|++|++  +|+|.||+++++      ++.+.+.........+.+...+.++.. ++.  .........+++.+
T Consensus       224 ~~~i~~~s~SK~~~~~GlR~G~~~~~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  296 (382)
T d1b5pa_         224 EHTLTVNGAAKAFAMTGWRIGYACGPK------EVIKAMASVSRQSTTSPDTIAQWATLE-ALTNQEASRAFVEMAREAY  296 (382)
T ss_dssp             TTEEEEEESTTTTTCGGGCCEEEECCH------HHHHHHHHHHHTTTCSCCHHHHHHHHH-HHHCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEecchhhccCcHhheEEEEECH------HHHHHHHHHHHhcccCccccccccccc-ccccccchhHHHHHHHHHH
Confidence            2238889999986  789999999987      666655433222233333433333322 221  11111224556667


Q ss_pred             HHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccC
Q 009673          380 VSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTR  459 (529)
Q Consensus       380 ~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~  459 (529)
                      ..+++.+.+.+.+.|+.+..+ ..++++|+++.+.+.+...+.+.|.++||.+.    ||+... .++++||++.     
T Consensus       297 ~~~~~~~~~~l~~~g~~~~~p-~gg~~~~~~~~~~~~~~~~~~~~l~e~gV~v~----PG~~F~-~~~~iRis~~-----  365 (382)
T d1b5pa_         297 RRRRDLLLEGLTALGLKAVRP-SGAFYVLMDTSPIAPDEVRAAERLLEAGVAVV----PGTDFA-AFGHVRLSYA-----  365 (382)
T ss_dssp             HHHHHHHHHHHHHHTCCBCCC-SBTTEEEEECTTTCSSHHHHHHHHHHTTEECE----ESGGGT-CTTEEEEECC-----
T ss_pred             HhhhhHHHHHHhhcCCeEecC-CceEEEeEeCCCCCCCHHHHHHHHHHCCEEEE----eCcccC-CCCeEEEEEc-----
Confidence            777888888888888887654 34677888987766777888888889999984    454311 3578999863     


Q ss_pred             CCCHHHHHHHHHHHHHH
Q 009673          460 GFSEKEFVAIADFIHEG  476 (529)
Q Consensus       460 g~~~~d~~~la~~i~~~  476 (529)
                       .+++++++..++|+++
T Consensus       366 -~~~e~l~~al~rl~~~  381 (382)
T d1b5pa_         366 -TSEENLRKALERFARV  381 (382)
T ss_dssp             -SCHHHHHHHHHHGGGG
T ss_pred             -CCHHHHHHHHHHHHHh
Confidence             3478888887777654

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.96  E-value=9.2e-29  Score=254.79  Aligned_cols=341  Identities=13%  Similarity=0.100  Sum_probs=231.3

Q ss_pred             hhcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673          101 QFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS  178 (529)
Q Consensus       101 ~~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs  178 (529)
                      .++.|+|..+++  ++|+.|++++...+.+.. .+|+..   .|   ..++++...+++.+..+...... .+|.+++|+
T Consensus        24 ~~dvi~l~~g~p~~~~p~~v~~~~~~a~~~~~-~~Y~~~---~G---~~~lr~aia~~~~~~~~~~~~~~-~~i~~t~G~   95 (388)
T d1gdea_          24 MKDVISLGIGEPDFDTPQHIKEYAKEALDKGL-THYGPN---IG---LLELREAIAEKLKKQNGIEADPK-TEIMVLLGA   95 (388)
T ss_dssp             CTTCEECCCCSCCSCCCHHHHHHHHHHHHTTC-CSCCCT---TC---CHHHHHHHHHHHHHHHCCCCCTT-TSEEEESST
T ss_pred             CCCeEECCCCCCCCCCCHHHHHHHHHHHhcCc-cCCCCC---cC---CHHHHHHHHHHHHhhccccCCCh-heeeeccCc
Confidence            457899988875  478999999998876533 234321   12   23555555677777666542211 256678887


Q ss_pred             -HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEE
Q 009673          179 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLII  256 (529)
Q Consensus       179 -~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi  256 (529)
                       +++..++.++++|||+|++++|.|.++..        .+...|.  +++.++++++ ++.+|+|+|++.+++ ++++++
T Consensus        96 ~~~l~~~~~~l~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~  164 (388)
T d1gdea_          96 NQAFLMGLSAFLKDGEEVLIPTPAFVSYAP--------AVILAGG--KPVEVPTYEEDEFRLNVDELKKYVTD-KTRALI  164 (388)
T ss_dssp             THHHHHHHTTTCCTTCEEEEEESCCTTHHH--------HHHHHTC--EEEEEECCGGGTTCCCHHHHHHHCCT-TEEEEE
T ss_pred             chHHHHHHHHhcCCCCEEEECCCCcHHHHH--------HHHHcCC--EEEEeecccccCCCCCHHHHHHhCcc-CCeEEE
Confidence             99999999999999999999998765432        2344555  6666666543 478999999999987 899999


Q ss_pred             EcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC---C---cccEEEecccccc--cCCCCeE
Q 009673          257 AGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K---YCDVVTTTTHKSL--RGPRGGM  323 (529)
Q Consensus       257 ~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~---~aDiv~~S~hK~l--~GprgG~  323 (529)
                      +++|+||+  ..   ++++|.++|++||++||+|++|. .+...+....++   .   .-.+++.|++|++  +|+|.||
T Consensus       165 ~~~P~NPtG~~~s~~~~~~l~~~a~~~~~~vi~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~  243 (388)
T d1gdea_         165 INSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYE-HFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGF  243 (388)
T ss_dssp             EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT-TCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEE
T ss_pred             ECCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcCCh-hhhhccCCCCChhhccCCCCeEEEEeCChhhccCccccEEE
Confidence            99999997  33   57888999999999999999954 444333222221   1   1238889999985  7999999


Q ss_pred             EEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC
Q 009673          324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-SPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS  402 (529)
Q Consensus       324 i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt  402 (529)
                      +++++      ++.+.+.........+.+...+.+ .+.+++... ........+.+.++++.+.+.|...++....+ .
T Consensus       244 ii~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p-~  315 (388)
T d1gdea_         244 VAAPS------WIIERMVKFQMYNATCPVTFIQYA-AAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKP-K  315 (388)
T ss_dssp             EECCH------HHHHHHHHHHHTTTCSCCHHHHHH-HHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCC-C
T ss_pred             EEeec------cchhhhhhccccccccccccchhh-HHHHHhhccchhHHHHHHHHHHHhhhhhhhhhhhccccccCC-C
Confidence            99988      566555443333333333333332 223342110 11234555666777888888888888776654 2


Q ss_pred             CCceEEEccCCCCCcHHHH-HHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          403 DNHLVLVDLRPMGIDGARV-EKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       403 ~~~~~~v~~~~~~i~~~~~-~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      .+.++|++++..+.+..++ +++|+++||.+.    ||.. +...++++||++.      .+++++++..+.|+++++.
T Consensus       316 gg~fl~~~l~~~~~~~~~~~~~ll~e~gV~v~----PG~~F~~~~~~~iRis~~------~~~e~l~~al~rL~~~l~e  384 (388)
T d1gdea_         316 GAFYIFPRIRDTGLTSKKFSELMLKEARVAVV----PGSAFGKAGEGYVRISYA------TAYEKLEEAMDRMERVLKE  384 (388)
T ss_dssp             BTTEECCBCGGGTCCHHHHHHHHHHHTCEECE----EGGGGCGGGTTBEEEECC------SCHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEECCCCCCCHHHHHHHHHHhCCEEEE----echhhCCCCCCEEEEEec------CCHHHHHHHHHHHHHHHHh
Confidence            3567788887656677665 455788999984    4433 2223578999863      3578999999999988874

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=99.96  E-value=7.5e-28  Score=248.37  Aligned_cols=337  Identities=13%  Similarity=0.085  Sum_probs=231.4

Q ss_pred             hcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673          102 FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-  178 (529)
Q Consensus       102 ~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-  178 (529)
                      ++.|+|..+++  .+|+.|++++...+.+.+ .+|+..   .|   ..++.+...+++.+.+|+..+.  .+|.+|+|+ 
T Consensus        30 ~~vi~l~~G~p~~~~p~~v~~a~~~~~~~~~-~~Y~~~---~G---~~~lR~aia~~~~~~~g~~~~~--~~i~it~G~~  100 (388)
T d1j32a_          30 IDVCSFSAGEPDFNTPKHIVEAAKAALEQGK-TRYGPA---AG---EPRLREAIAQKLQRDNGLCYGA--DNILVTNGGK  100 (388)
T ss_dssp             CCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CSCCCT---TC---CHHHHHHHHHHHHHHHCCCCCG--GGEEEESHHH
T ss_pred             CCeEECCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CC---CHHHHHHHHHHHHHhcccCCCC--ceEEEcCCHH
Confidence            36789987774  368999999988776543 233321   12   2355666668888888877432  367789998 


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEE
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA  257 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~  257 (529)
                      +|+..++.++++|||+|++++|.|.++.        ..+...|.  +.+.++.+.+ ++.+|++++++.+++ +++++++
T Consensus       101 ~al~~~~~~~~~~gd~Vlv~~P~y~~~~--------~~~~~~~~--~~v~~~~~~~~~~~~d~~~l~~~~~~-~~~~~~~  169 (388)
T d1j32a_         101 QSIFNLMLAMIEPGDEVIIPAPFWVSYP--------EMVKLAEG--TPVILPTTVETQFKVSPEQIRQAITP-KTKLLVF  169 (388)
T ss_dssp             HHHHHHHHHHCCTTCEEEEESSCCTHHH--------HHHHHTTC--EEEEECCCGGGTTCCCHHHHHHHCCT-TEEEEEE
T ss_pred             HHHHHHHHHHhCCCCEEEEcCCCcHHHH--------HHHHHhcC--eEEEEecccccccCCCHHHHHHhCCC-CCeEEEE
Confidence            9999999999999999999999876542        12334454  5566655443 478999999999987 8899999


Q ss_pred             cCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-------cccEEEecccccc--cCCCCeE
Q 009673          258 GASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-------YCDVVTTTTHKSL--RGPRGGM  323 (529)
Q Consensus       258 ~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-------~aDiv~~S~hK~l--~GprgG~  323 (529)
                      ++|+||+  ..   .+++|.++|+++|++||+|++| ..+.+.+....++.       ...+++.|+||++  +|+|.||
T Consensus       170 ~~P~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y-~~~~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~GlRvG~  248 (388)
T d1j32a_         170 NTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIY-EKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGF  248 (388)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTT-TTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEE
T ss_pred             CCCCCCCCcccchhhhhhhhcccccCCeEEEchhhh-hcccccCCCCCCHHHhCcccccceeEecCChhhhhcchhHeEE
Confidence            9999997  33   4778888899999999999984 44444332222221       1237889999986  7999999


Q ss_pred             EEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCC
Q 009673          324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGS  402 (529)
Q Consensus       324 i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt  402 (529)
                      +++++      ++.+.+.........+.+...+.+ ....+.. ....+++..+.+.++++.+.+.|++. |+.+..+ .
T Consensus       249 ~~~~~------~~~~~~~~~~~~~~~~~~~~~q~a-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~p-~  319 (388)
T d1j32a_         249 LAGPV------PLVKAATKIQGHSTSNVCTFAQYG-AIAAYEN-SQDCVQEMLAAFAERRRYMLDALNAMPGLECPKP-D  319 (388)
T ss_dssp             EECCH------HHHHHHHHHHHTTTCSCCHHHHHH-HHHHHHS-CSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCC-C
T ss_pred             EEECH------HHHHHHHHhhhhccccccHHHHHH-Hhhcccc-hHHHHHHHHHHHHHHHHHHHHHHHhCCCCEecCC-C
Confidence            99987      666655433222222222333333 2333432 22345778888899999999999884 7776654 2


Q ss_pred             CCceEEEccCCCCCcHHHH-HHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          403 DNHLVLVDLRPMGIDGARV-EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       403 ~~~~~~v~~~~~~i~~~~~-~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      .++++|+++...+.+..++ .++|+++||.+.    ||.... .++++||++.      .+++++++..+.|+++++.
T Consensus       320 gg~~l~~~l~~~~~~~~~~~~~ll~~~gV~v~----pG~~F~-~~~~~Rls~~------~~~e~l~~al~rl~~~l~~  386 (388)
T d1j32a_         320 GAFYMFPSIAKTGRSSLDFCSELLDQHQVATV----PGAAFG-ADDCIRLSYA------TDLDTIKRGMERLEKFLHG  386 (388)
T ss_dssp             BTTEECCBCGGGTCCHHHHHHHHHHHHCEECE----EGGGGT-CTTBEEEECC------SCHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEECCCCCCCHHHHHHHHHHhCCEEEE----eccccC-CCCeEEEEEe------CCHHHHHHHHHHHHHHHHH
Confidence            3567788876555565554 566788999994    443311 3578999863      3578888888888888763

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=4e-27  Score=244.28  Aligned_cols=346  Identities=16%  Similarity=0.115  Sum_probs=240.6

Q ss_pred             eeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673          105 LELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF  182 (529)
Q Consensus       105 i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~-r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~  182 (529)
                      +-|. ++..++|+.|++++...+.+.|.  .|+. .+..+....+.+| .+++.+++++|+...+  ..+.+.+.|+++.
T Consensus        24 iYld~a~~~~~p~~v~~~~~~~~~~~~~--n~~~~~~~~~~~~~~~~e-~~R~~ia~~l~~~~~~--~i~~~~~~T~~~~   98 (405)
T d1jf9a_          24 AYLDSAASAQKPSQVIDAEAEFYRHGYA--AVHRGIHTLSAQATEKME-NVRKRASLFINARSAE--ELVFVRGTTEGIN   98 (405)
T ss_dssp             EECCTTTCCCCCHHHHHHHHHHHHHTCC--CCSSCSSHHHHHHHHHHH-HHHHHHHHHTTCSCGG--GEEEESSHHHHHH
T ss_pred             EEEeCccccCCCHHHHHHHHHHHHhccC--CCccchhHHHHHHHHHHH-HHHHHHHHHcCCCCcc--cccccCcHHHHHH
Confidence            4554 45568999999999988876653  4432 1233334445555 5789999999976432  1233345568887


Q ss_pred             HHHHh----hcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          183 EVYTA----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       183 ~~l~a----ll~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      .++.+    ..++||+|++.+.+|.+.......    .....|.  ++..++++ .++.+|++.+++++.+ +|++|++.
T Consensus        99 ~~~~~~~~~~~~~g~~il~~~~e~~s~~~~~~~----~a~~~g~--~v~~~~~~-~~g~~~~~~~~~~i~~-~t~lv~~~  170 (405)
T d1jf9a_          99 LVANSWGNSNVRAGDNIIISQMEHHANIVPWQM----LCARVGA--ELRVIPLN-PDGTLQLETLPTLFDE-KTRLLAIT  170 (405)
T ss_dssp             HHHHHHHHHHCCTTCEEEEETTCCGGGTHHHHH----HHHHHTC--EEEEECBC-TTSCBCGGGHHHHCCT-TEEEEEEE
T ss_pred             HHHhcccccccCCCCEEEEEeCcccchHHHHHH----HHHHcCc--EEEEECCC-CCCcCCHHHHHHhccC-CcEEEEEe
Confidence            77665    268999999999998876543311    0112343  66677777 4689999999999988 89999988


Q ss_pred             CCCC--CCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhH
Q 009673          259 ASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVE  335 (529)
Q Consensus       259 ~s~~--p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~  335 (529)
                      ..+|  +...|+++|.++|+++|+++++|++|+.|.+..++...   ++|++++|+|||+ ||+| |++++++      +
T Consensus       171 ~v~~~tG~~~pi~~i~~~~~~~g~~~~vD~~q~~g~~~id~~~~---~~D~~~~s~hK~~-Gp~G~g~l~v~~------~  240 (405)
T d1jf9a_         171 HVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQAL---DCDFYVFSGHKLY-GPTGIGILYVKE------A  240 (405)
T ss_dssp             SBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH---TCSEEEEEGGGTT-SCSSCEEEEECH------H
T ss_pred             cCCCcccccCchHHhhhHHHHcCCeeecccceeccccccchhhc---CCceeeccccccc-cCCCceeeeech------h
Confidence            5443  34899999999999999999999999999775443222   5899999999996 8998 9999987      4


Q ss_pred             HHhhhcccc---------------------cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC
Q 009673          336 LESAINNAV---------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG  394 (529)
Q Consensus       336 l~~~i~~~~---------------------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G  394 (529)
                      +.+.+....                     .....|+++...++++..+++.....+.+...++.....+.+.+.+...+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~L~~~~~~~l~~~~  320 (405)
T d1jf9a_         241 LLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVP  320 (405)
T ss_dssp             HHTTCCCSSCSSSSEEECCTTTCCEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTST
T ss_pred             hhcccCcccccccccCccccccccccccchhhhcCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHhhhhcCC
Confidence            433322100                     01125889999999999999876655666667777777777777777654


Q ss_pred             cEEe-cCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC---CCCCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673          395 YKLV-SGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVAIA  470 (529)
Q Consensus       395 ~~v~-~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~---~~~~~~~iRig~~~~tt~g~~~~d~~~la  470 (529)
                      .... .+....+.+.+.+  .+.++..+...|++.||.++.+......   ....++.||||++.++|    ++|+++++
T Consensus       321 ~~~~~~~~~r~~ivsf~~--~~~~~~~~~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~iRiS~~~ynt----~eDid~l~  394 (405)
T d1jf9a_         321 DLTLYGPQNRLGVIAFNL--GKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNT----HEEVDRLV  394 (405)
T ss_dssp             TEEEESCTTCCSEEEEEE--TTCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCC----HHHHHHHH
T ss_pred             cccccCCcCcCcEEEEEc--CCCCHHHHHHHHHHCCcEEEccchhhhhHHHhcCCCCEEEEECCCCCC----HHHHHHHH
Confidence            4433 3322233333444  3567888999999999998643210000   01125789999998876    79999999


Q ss_pred             HHHHHHHHH
Q 009673          471 DFIHEGVEI  479 (529)
Q Consensus       471 ~~i~~~~~~  479 (529)
                      +.|+++++.
T Consensus       395 ~~l~~i~r~  403 (405)
T d1jf9a_         395 TGLQRIHRL  403 (405)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            999988764

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=7.9e-27  Score=237.94  Aligned_cols=339  Identities=13%  Similarity=0.106  Sum_probs=224.9

Q ss_pred             eeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHH
Q 009673          105 LELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PAN  181 (529)
Q Consensus       105 i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~  181 (529)
                      |.|..++.  ++|+.|+||+.+.+.+.. .+|+.   .+|    +++.+...+++++.+|.+.+.  .+|.+++|+ +++
T Consensus         2 ~~~~~~~~df~~p~~i~eal~~~~~~~~-~~Y~~---~~g----~~lr~~ia~~~~~~~g~~~~~--~~i~it~G~~~~l   71 (361)
T d1d2fa_           2 LPFTISDMDFATAPCIIEALNQRLMHGV-FGYSR---WKN----DEFLAAIAHWFSTQHYTAIDS--QTVVYGPSVIYMV   71 (361)
T ss_dssp             EECCSSSCSSCCCHHHHHHHHHHHTTCC-CCCCC---SCC----HHHHHHHHHHHHHHSCCCCCG--GGEEEESCHHHHH
T ss_pred             cCcCCCCCCCCCCHHHHHHHHHHHhCCC-CCCCC---CCC----HHHHHHHHHHHHHHhCCCCCc--ceEEEeCCHHHHH
Confidence            55666663  468999999998876432 24543   233    245555668888999987432  356778887 899


Q ss_pred             HHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 009673          182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA  261 (529)
Q Consensus       182 ~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~  261 (529)
                      ..++.++++|||+|++++|.|.++..        .....|.....++++...+++.+|++++++.+...++|+|++++++
T Consensus        72 ~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~p~  143 (361)
T d1d2fa_          72 SELIRQWSETGEGVVIHTPAYDAFYK--------AIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQ  143 (361)
T ss_dssp             HHHHHHSSCTTCEEEEEESCCHHHHH--------HHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSC
T ss_pred             HHHhhhccccccccccccccccchhH--------HHHhhcceEEeecccccccccccccccchhhcccCCceeEEecccc
Confidence            99999999999999999998765532        2334454333333333334567999999999977688999999999


Q ss_pred             CCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC----cccEEEecccccc--cCCCCeEEEeeCCC
Q 009673          262 YPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSL--RGPRGGMIFFKKDP  330 (529)
Q Consensus       262 ~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~----~aDiv~~S~hK~l--~GprgG~i~~~~~~  330 (529)
                      ||+     ..++++|.++|+++|+++|+|++| .++++.+..+.++.    .-.++..|++|++  +|+|+||++.... 
T Consensus       144 NPTG~~~s~~~~~~i~~~~~~~~~~lI~De~y-~~~~~~~~~~~~~~~~~~~~~v~~~s~SK~~~~~g~R~g~~~~~~~-  221 (361)
T d1d2fa_         144 NPTGKVWTCDELEIMADLCERHGVRVISDEIH-MDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENS-  221 (361)
T ss_dssp             TTTCCCCCTTHHHHHHHHHHHTTCEEEEECTT-TTCBCSSSCCCCGGGTCCSSEEEEECSHHHHTCGGGCCEEEEECSH-
T ss_pred             cccccccchhhhhhhhhhhhhhheeeeecccc-cccccccccccccccccccccccccccccccccccccceeeecchh-
Confidence            997     235889999999999999999984 55555443333322    1237778999965  7999999987652 


Q ss_pred             cchhHHHhh-hcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cCcEEecCCCCCceE
Q 009673          331 VLGVELESA-INNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGGSDNHLV  407 (529)
Q Consensus       331 ~~~~~l~~~-i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G~~v~~~gt~~~~~  407 (529)
                          ..... +.........++|....+++...++... ....++....+.++++.+.+.+.+  .++.+..+ ..++++
T Consensus       222 ----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p-~gg~~~  295 (361)
T d1d2fa_         222 ----SSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQG-APWLDALRIYLKDNLTYIADKMNAAFPELNWQIP-QSTYLA  295 (361)
T ss_dssp             ----HHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCC-SBCSEE
T ss_pred             ----HHHHHHhhhcccccccccchhhhHHHHHHHhhcc-chhhhcccccchhhHHHHHHHhhhhccccccccc-CceeEE
Confidence                22222 2111111122344444444433334322 223466677777888888887766  35555544 235677


Q ss_pred             EEccCCCCCcHHHHHHh-HhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      |+++++.++++.++.+. |+++||.+.+    |.. ++...++|||++.      .+++++++..+.|.++++.
T Consensus       296 ~~~l~~~~~~~~~~~~~Ll~~~gv~v~p----G~~F~~~~~~~vRis~~------~~~e~l~~al~rl~~~l~~  359 (361)
T d1d2fa_         296 WLDLRPLNIDDNALQKALIEQEKVAIMP----GYTYGEEGRGFVRLNAG------CPRSKLEKGVAGLINAIRA  359 (361)
T ss_dssp             EEECGGGCCCHHHHHHHHHHTTCEECEE----GGGGCGGGTTEEEEECC------SCHHHHHHHHHHHHHHHHH
T ss_pred             EEEccCCCCCHHHHHHHHHHhCCEEEEe----ccccCCCCCCEEEEEEc------CCHHHHHHHHHHHHHHHHh
Confidence            88887777888776654 5788999954    433 2223568999852      3578899888888888764

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.95  E-value=1.8e-26  Score=239.50  Aligned_cols=347  Identities=17%  Similarity=0.140  Sum_probs=241.8

Q ss_pred             eeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-HHHH
Q 009673          105 LELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPAN  181 (529)
Q Consensus       105 i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~-r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s~A~  181 (529)
                      |.|. ++-.++|+.|++++...+.+.|.  .|++ .+..|.+..+.+| .+++.+++++|++.++.   |..+++ ++++
T Consensus        24 iYld~a~~~~~p~~v~~~~~~~~~~~~~--n~~s~~~~~~~~~~~~~e-~aR~~ia~llga~~~~~---i~~~~~tt~~~   97 (408)
T d1t3ia_          24 VYLDNAATSQKPRAVLEKLMHYYENDNA--NVHRGAHQLSVRATDAYE-AVRNKVAKFINARSPRE---IVYTRNATEAI   97 (408)
T ss_dssp             EECBTTTCCCCCHHHHHHHHHHHHHTCC--CC--CCSHHHHHHHHHHH-HHHHHHHHHTTCSCGGG---EEEESSHHHHH
T ss_pred             EEeeCccccCCCHHHHHHHHHHHHhcCC--CCCchhhHHHHHHHHHHH-HHHHHHHHHhCCCCccc---EEeecchHHHH
Confidence            5563 46678999999999988877663  3432 2333444455666 57899999999986432   333444 4777


Q ss_pred             HHHHHh----hcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 009673          182 FEVYTA----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA  257 (529)
Q Consensus       182 ~~~l~a----ll~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~  257 (529)
                      ..++.+    -+++||+|++.+.+|.+.......    .....|.  ++..++.+ .++..|.+.+++++++ ++++|++
T Consensus        98 n~~~~~~~~~~~~~g~~il~s~~e~~s~~~~~~~----~~~~~g~--~v~~~~~~-~~~~~~~~~l~~~~~~-~t~lv~i  169 (408)
T d1t3ia_          98 NLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQM----VAAKTGA--VLKFVQLD-EQESFDLEHFKTLLSE-KTKLVTV  169 (408)
T ss_dssp             HHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHH----HHHHHCC--EEEEECBC-TTSSBCHHHHHHHCCT-TEEEEEE
T ss_pred             HHHHhhccccccCCCCEEEeecccchhhhhhhhh----hhhccCc--eEeeeecc-ccccccHHHhhhccCC-CceEEEE
Confidence            766655    368999999999988776532211    1112243  45555554 4678899999999988 8999998


Q ss_pred             cCC--CCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchh
Q 009673          258 GAS--AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGV  334 (529)
Q Consensus       258 ~~s--~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~  334 (529)
                      .+.  ..+...|+++|.++|+++|+++++|++|+.|.+..+....   ++|++++|+|||+ ||+| |+++.++      
T Consensus       170 ~~~~~~tG~~~p~~~i~~~~~~~g~~~ivDa~q~~g~~~id~~~~---~~D~~~~s~hK~~-gp~G~g~l~v~~------  239 (408)
T d1t3ia_         170 VHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLI---DCDWLVASGHKMC-APTGIGFLYGKE------  239 (408)
T ss_dssp             ESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH---TCSEEEEEGGGTT-SCTTCEEEEECH------
T ss_pred             ecccccccccCcHHHHhhhhhccCceeeeccceeccccccccccc---CCceEEecccccc-CCCCccccccch------
Confidence            743  3444899999999999999999999999999875443222   5899999999995 8888 9999987      


Q ss_pred             HHHhhhcccc--------------------cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-
Q 009673          335 ELESAINNAV--------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-  393 (529)
Q Consensus       335 ~l~~~i~~~~--------------------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-  393 (529)
                      ++........                    .....|+++...++++..+++.+...+.++..++.....+++.+.+.+. 
T Consensus       240 ~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~~~~~~  319 (408)
T d1t3ia_         240 EILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIP  319 (408)
T ss_dssp             HHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred             hhhhcCCceecCCcccccccccccccCCchhhhcCCcHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHhHHhhhhccCc
Confidence            4433321110                    0112688999999999999987765566777777888888888888774 


Q ss_pred             CcEEecCCC--CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCC---CCCCCCCCCCeEEEccCCCccCCCCHHHHHH
Q 009673          394 GYKLVSGGS--DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSV---PGDKSALVPGGIRIGSPAMTTRGFSEKEFVA  468 (529)
Q Consensus       394 G~~v~~~gt--~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~---Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~  468 (529)
                      ++.++.+..  ..+..++.+...++++.++.+.|+++||.++.++.   |....-..++.||||++.++|    ++|+++
T Consensus       320 ~~~~~~~~~~~~~~~~iv~f~~~~~~~~~v~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~vRiS~~~ynt----~~did~  395 (408)
T d1t3ia_         320 QLRLYGPNPKHGDRAALASFNVAGLHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNT----KEEIDL  395 (408)
T ss_dssp             TEEEESCCGGGSCBCSEEEEEETTBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCC----HHHHHH
T ss_pred             cccccCCCccccCcceEEEEEeCCCCHHHHHHHHhhCCcEEecCcccccHHHHhhcCCccEEEECCCCCC----HHHHHH
Confidence            566664321  12222333333467888899999999999865321   000000124679999988876    899999


Q ss_pred             HHHHHHHHHHH
Q 009673          469 IADFIHEGVEI  479 (529)
Q Consensus       469 la~~i~~~~~~  479 (529)
                      +++.|+++++.
T Consensus       396 li~~L~~~~~~  406 (408)
T d1t3ia_         396 FLQSLQATIRF  406 (408)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999998863

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=6.8e-27  Score=241.00  Aligned_cols=340  Identities=15%  Similarity=0.177  Sum_probs=226.7

Q ss_pred             cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCC-CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-HHHHHHHHH
Q 009673          109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG-GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYT  186 (529)
Q Consensus       109 asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~-g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s~A~~~~l~  186 (529)
                      ++-.++++.|+|+|...+.+....|.|....+. |....+.++ .+++.+++++|+++++    |.+++| |+++..++.
T Consensus         9 aa~~p~~~~v~ea~~~~~~~~~~~~np~~~~~~~~~~~~~~~~-~~R~~iA~~lg~~~~~----I~~~~~~t~~l~~~~~   83 (391)
T d1p3wa_           9 SATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVD-IARNQIADLVGADPRE----IVFTSGATESDNLAIK   83 (391)
T ss_dssp             TTCCCCCHHHHHHHHTTTSTTSCCCCTTCTTSHHHHHHHHHHH-HHHHHHHHHHTCCGGG----EEEESSHHHHHHHHHH
T ss_pred             ccccCCCHHHHHHHHHHHHhccccCCCchhhhHHHHHHHHHHH-HHHHHHHHHcCCCCCc----EEEECCHHHHHHHHHh
Confidence            345688999999999888655444555443322 222233444 5789999999999864    444555 488777776


Q ss_pred             hh----cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673          187 AI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY  262 (529)
Q Consensus       187 al----l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~  262 (529)
                      ++    +++||+|++.+++|++++....     .+...|.  ++..++.+ +++.+|++++++++++ +|++|++++++|
T Consensus        84 ~~~~~~~~~gd~Vv~~~~~~~s~~~~~~-----~~~~~G~--~v~~v~~~-~~~~~d~~~~~~~i~~-~T~lv~is~~~n  154 (391)
T d1p3wa_          84 GAANFYQKKGKHIITSKTEHKAVLDTCR-----QLEREGF--EVTYLAPQ-RNGIIDLKELEAAMRD-DTILVSIMHVNN  154 (391)
T ss_dssp             HHHHHHGGGCCEEEEETTSCHHHHHHHH-----HHHHTTC--EEEEECCC-TTSCCCHHHHHHHCCT-TEEEEECCSBCT
T ss_pred             hhhhhhcCCCCEEEEeccccchHHHHHH-----HHHHcCC--EEEEeCCC-CCCeEcHHHHHHhCCC-CcEEEEEECCCC
Confidence            54    5899999999998876543211     1122343  66666666 4678999999999988 999999997776


Q ss_pred             CC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhh
Q 009673          263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA  339 (529)
Q Consensus       263 p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~  339 (529)
                      ++  ..|+++|+++|+++|+++++|++|+.|....+....   ++|++++|+|||+ ||.| |+++++++      ....
T Consensus       155 ~tG~~~~~~~I~~~~~~~~~~~ivD~~~~~g~~~~d~~~~---~~D~~~~s~~k~~-g~~g~g~~~~~~~------~~~~  224 (391)
T d1p3wa_         155 EIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQL---KVDLMSFSGHKIY-GPKGIGALYVRRK------PRVR  224 (391)
T ss_dssp             TTCCBCCHHHHHHHHHHHTCEEEEECTTTBTTBCCCTTTS---CCSEEEEESTTTT-SCSSCEEEEECBT------TBCC
T ss_pred             CCeeECCHHHHHHHhccCCcEEEEeeccccCCccccchhc---ccccccccccccc-CCCceEEEEEecc------hhcc
Confidence            65  889999999999999999999999999875544333   5899999999996 6776 99999884      3222


Q ss_pred             hccccc------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC-CC--CCceEEEc
Q 009673          340 INNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG-GS--DNHLVLVD  410 (529)
Q Consensus       340 i~~~~~------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~-gt--~~~~~~v~  410 (529)
                      ......      ....+++......+++.++.... .......+++.+.+..+.+.|.+.+...+.. ..  ..+.+.+ 
T Consensus       225 ~~~~~~gg~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~-  302 (391)
T d1p3wa_         225 IEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAK-EEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNV-  302 (391)
T ss_dssp             CCCSSCSSCTTTTTSCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTTTSTTEEECSCTTTSCTTEEEE-
T ss_pred             cCCcccCCccccCcccCcchhhhhhhhhhhhhHHH-HHhhHHHHHHHHHHHHHHHHHHhhcCeeecccccccCceEEEE-
Confidence            222111      12245666777777776666543 2345556677777777877777654433322 11  1222222 


Q ss_pred             cCCCCCcHHHHHHhHhcCCeEEcCCC--CCCCCCC------------CCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          411 LRPMGIDGARVEKILDMASITLNKNS--VPGDKSA------------LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       411 ~~~~~i~~~~~~~~L~~~GI~v~~~~--~Pg~~~~------------~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                       ...+.++..+...|.+  |.++.+.  .++...+            ...+.||||++.+||    ++|++++++.|+++
T Consensus       303 -~~~~~~~~~~~~~l~~--i~v~~G~~c~~~~~~~~~~l~~~g~~~~~~~g~iRiS~~~~nt----~edid~l~~~l~~~  375 (391)
T d1p3wa_         303 -SFNYVEGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTT----EEEIDYTIELVRKS  375 (391)
T ss_dssp             -EETTSCHHHHHHHTTT--EECBCCCC------CCCHHHHHHTCCHHHHHTEEEEECCTTCC----HHHHHHHHHHHHHH
T ss_pred             -EeCCCChHHHHHHhCC--CEEEccccccCCccchhHHHHHcCCCccccCCEEEEecCCCCC----HHHHHHHHHHHHHH
Confidence             2234567777777754  4443221  1111100            012579999887765    89999999999999


Q ss_pred             HHHHH
Q 009673          477 VEITL  481 (529)
Q Consensus       477 ~~~~~  481 (529)
                      +....
T Consensus       376 l~~lr  380 (391)
T d1p3wa_         376 IGRLR  380 (391)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98654

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=99.95  E-value=1.2e-26  Score=239.80  Aligned_cols=352  Identities=14%  Similarity=0.119  Sum_probs=231.1

Q ss_pred             HHHHHHHHHHHh-hcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCC
Q 009673           90 VCEIITKEKERQ-FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN  166 (529)
Q Consensus        90 ~~~~~~~e~~~~-~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~  166 (529)
                      -|+.+.++.... ++.|+|..++.  ++|+.|++|+...+.+.. .||+     .|.   .++++.+.+++++.+|++.+
T Consensus        18 k~~~~~~~~~~~g~~vi~l~~g~pdf~~p~~v~~al~~~~~~~~-~~Y~-----~g~---~~Lr~aia~~~~~~~g~~~~   88 (394)
T d1c7na_          18 KWDLMYSQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDETV-LGYT-----GPT---EEYKKTVKKWMKDRHQWDIQ   88 (394)
T ss_dssp             HHHHHHHHCTTCCTTCCCCCSSSCSSCCCHHHHHHHHHHHHHCC-CSSB-----CCC---HHHHHHHHHHHHHHHCCCCC
T ss_pred             HHHHHHHHhHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCC-cCCC-----CCC---HHHHHHHHHHHHHhcCCCCC
Confidence            355554443322 36789987774  468999999998876542 2443     232   36777788999999998754


Q ss_pred             CCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC--CCCCCCHHHH
Q 009673          167 KWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE--STGLVDYDML  243 (529)
Q Consensus       167 ~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~--~~~~iD~d~l  243 (529)
                      .  -+|.+|+|+ +|+..++.++++|||+|++++|.+.++..        .....|.  ..+.++...  ..+.+|.+.+
T Consensus        89 ~--~~I~vt~G~~~al~~~~~~~~~pgd~vi~~~p~~~~~~~--------~~~~~g~--~~v~~~~~~~~~~~~~d~~~~  156 (394)
T d1c7na_          89 T--DWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFM--------AIKNQER--KIIECELLEKDGYYTIDFQKL  156 (394)
T ss_dssp             G--GGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHH--------HHHTTTC--EEEECCCEEETTEEECCHHHH
T ss_pred             C--cceEeeccchhhhhhhhccccccccccccccCcccchhh--------HHhhhhh--cccccccccccccccchhhhh
Confidence            3  367778888 99999999999999999999987755432        2233443  555554432  2357899999


Q ss_pred             HHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-------cccEEEec
Q 009673          244 EKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-------YCDVVTTT  311 (529)
Q Consensus       244 e~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-------~aDiv~~S  311 (529)
                      +..+...++++|++++|+||+  ..   ++++|.++|++++++||+|++ |..+++.+....+..       ..-++++|
T Consensus       157 ~~~~~~~~~~~i~l~~P~NPTG~v~s~~~l~~l~~~a~~~~~~ii~De~-Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s  235 (394)
T d1c7na_         157 EKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEI-HFDLIMPGYEHTVFQSIDEQLADKTITFTA  235 (394)
T ss_dssp             HHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECT-TTTCBCTTCCCCCGGGSCHHHHTTEEEEEC
T ss_pred             hhhhccccceEEEecccccccceeccHHHhhhhhccccccceeEecccc-ccccccCCccccchhhhhcccccceeeccc
Confidence            888866578999999999998  33   477888999999999999999 456665443222211       12378899


Q ss_pred             ccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Q 009673          312 THKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR  389 (529)
Q Consensus       312 ~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~  389 (529)
                      ++|++  +|+|.|++++++.     .+.+.+.................++....... .....+++.+.+.++++.+.+.
T Consensus       236 ~SK~~~~~G~R~g~~~~~~~-----~i~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  309 (394)
T d1c7na_         236 PSKTFNIAGMGMSNIIIKNP-----DIRERFTKSRDATSGMPFTTLGYKACEICYKE-CGKWLDGCIKVIDKNQRIVKDF  309 (394)
T ss_dssp             SHHHHTCGGGCCEEEECCCH-----HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccCh-----hhhhhhhhhhhhccccccccccchhhhhhhcc-hhhhhcccccccchhhhhhhhh
Confidence            99974  7999888888763     55555443221111112222222222222222 2223466666777777777777


Q ss_pred             HHhc--CcEEecCCCCCceEEEccCCCCCcHHHHH-HhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHH
Q 009673          390 LVEL--GYKLVSGGSDNHLVLVDLRPMGIDGARVE-KILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEF  466 (529)
Q Consensus       390 L~~~--G~~v~~~gt~~~~~~v~~~~~~i~~~~~~-~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~  466 (529)
                      |+..  |+.+..+ ..++++|++++..+++..++. .+|+++||.+.++...|   +..++++||++.      .+++++
T Consensus       310 l~~~~~~~~~~~p-~g~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg---~~~~~~iRis~~------~~~e~i  379 (394)
T d1c7na_         310 FEVNHPEIKAPLI-EGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFG---DGGIGFERINLA------APSSVI  379 (394)
T ss_dssp             HHHHCTTSBCCCC-SBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGC---GGGTTEEEEECC------SCHHHH
T ss_pred             hhccccceeecCC-CceeEEEEECCCCCCCHHHHHHHHHHhCCEEEEcchhhC---CCCCCEEEEEEe------CCHHHH
Confidence            7763  5554433 235678888876667777765 45678899985433222   224678999852      346888


Q ss_pred             HHHHHHHHHHHHH
Q 009673          467 VAIADFIHEGVEI  479 (529)
Q Consensus       467 ~~la~~i~~~~~~  479 (529)
                      ++..++|+++++.
T Consensus       380 ~eal~rl~~~l~~  392 (394)
T d1c7na_         380 QESLERLNKALKD  392 (394)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            8888888888764

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.95  E-value=2.1e-26  Score=236.28  Aligned_cols=336  Identities=15%  Similarity=0.121  Sum_probs=228.2

Q ss_pred             eeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673          105 LELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE  183 (529)
Q Consensus       105 i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~  183 (529)
                      +.|. ++-.++|..|++++...+.+.+..|..   .+.......++.+.+++.+++++|++++++   +...+||+++..
T Consensus         9 ~yld~~~~~~~p~~v~ea~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~r~~la~~~~~~~~~i---~~~~g~t~a~~~   82 (381)
T d1elua_           9 TYFNFGGQGILPTVALEAITAMYGYLQENGPF---SIAANQHIQQLIAQLRQALAETFNVDPNTI---TITDNVTTGCDI   82 (381)
T ss_dssp             EECCTTTCCCCCHHHHHHHHHHHHHHHHHCSS---SHHHHHHHHHHHHHHHHHHHHHTTSCGGGE---EEESSHHHHHHH
T ss_pred             EEeeCCcccCCCHHHHHHHHHHHHHhhcCCCc---cchhhHHHHHHHHHHHHHHHHHhCCCcccE---EEECChHHHhhh
Confidence            4443 456688999999998877543322211   122223344544567899999999988642   333455699998


Q ss_pred             HHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCC-HHHHHHHhhhcCCcEEEEcCCC
Q 009673          184 VYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD-YDMLEKTAILFRPKLIIAGASA  261 (529)
Q Consensus       184 ~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD-~d~le~~i~~~~pklIi~~~s~  261 (529)
                      ++.++ .++||+|++++.+|++......    ......|.  +++.++.+......+ .+.+++.+++ +++++++..++
T Consensus        83 ~~~~l~~~~g~~i~~~~~~~~s~~~~~~----~~~~~~g~--~~~~v~~~~~~~~~~~~~~l~~~i~~-~t~~v~i~~~~  155 (381)
T d1elua_          83 VLWGLDWHQGDEILLTDCEHPGIIAIVQ----AIAARFGI--TYRFFPVAATLNQGDAAAVLANHLGP-KTRLVILSHLL  155 (381)
T ss_dssp             HHHHSCCCTTCEEEEETTCCHHHHHHHH----HHHHHHCC--EEEEECCGGGSSSSCHHHHHHTTCCT-TEEEEEEESBC
T ss_pred             cchhhhhcCCceEEEeccccceeeeccc----cccccccc--cccccccccccccchHHHHHHhhhcc-ccccccccccc
Confidence            99888 7899999999988865432111    01122344  555555543222333 5666777776 89999998776


Q ss_pred             CCC--CCCHHHHHHHHHHh----CCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchh
Q 009673          262 YPR--DFDYPRMRQIADAV----GALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGV  334 (529)
Q Consensus       262 ~p~--~~d~~~i~~ia~~~----g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~  334 (529)
                      |++  ..|+++|.++|++|    |+++++|++|+.|....+....   ++|++++|+|||+.||.| |+++.+++     
T Consensus       156 n~tG~~~~~~~I~~l~~~~~~~~~~~~~vD~~~~~g~~~~~~~~~---~~D~~~~s~~K~~~~p~G~g~l~~~~~-----  227 (381)
T d1elua_         156 WNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRL---EVDYYAFTGHKWFAGPAGVGGLYIHGD-----  227 (381)
T ss_dssp             TTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTS---CCSEEEEESSSTTCCCTTCEEEEECTT-----
T ss_pred             ccccccchhhHHHHHHhhccccccccccccccccccccccccccc---ccccccccccccccccchhhHHHhhHH-----
Confidence            654  88999999999985    6999999999888654332211   689999999999999988 99999884     


Q ss_pred             HHHhhhcccc---------------------cCCCCCCChHHHHHHHHHHHHHhcCchH-HHHHHHHHHHHHHHHHHHHh
Q 009673          335 ELESAINNAV---------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVE  392 (529)
Q Consensus       335 ~l~~~i~~~~---------------------~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~~a~~l~~~L~~  392 (529)
                       ..+.+....                     .....|+++...+.++..|++.....+. +...++..++++++.+.|++
T Consensus       228 -~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~  306 (381)
T d1elua_         228 -CLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQ  306 (381)
T ss_dssp             -TGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -HHHhcCcccccccccccccccccccccccccccccccccchhhhhhhhhhhhHHHhcccccchhhhhhHHHHHHHHHhc
Confidence             333222110                     0112467888888888888876654443 44567888889999999998


Q ss_pred             -cCcEEecCC-CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673          393 -LGYKLVSGG-SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA  470 (529)
Q Consensus       393 -~G~~v~~~g-t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la  470 (529)
                       .|++++.+. ....++.+.+.. ..+.+.+.+.|++.||.++...        .+++|||+++.+||    ++|+++++
T Consensus       307 ~~~~~~~~~~~~~~~~vsf~~~~-~~~~~~i~~~L~~~gi~v~~~~--------~~~~lRis~~~~nt----~edid~ll  373 (381)
T d1elua_         307 LPHVHCLATSAPQAGLVSFTVDS-PLGHRAIVQKLEEQRIYLRTIA--------DPDCIRACCHYITD----EEEINHLL  373 (381)
T ss_dssp             STTEEESCSSCCSSSEEEEEECS-SSCHHHHHHHHHHTTEECEEET--------TTTEEEEECCTTCC----HHHHHHHH
T ss_pred             CCCeEecCCCCccccEEEEEcCC-CCCHHHHHHHHHhCCcEEEecC--------CCCEEEEecCCCCC----HHHHHHHH
Confidence             588887542 122344343422 2355778899999999875421        35789999876664    89999999


Q ss_pred             HHHHH
Q 009673          471 DFIHE  475 (529)
Q Consensus       471 ~~i~~  475 (529)
                      +.|++
T Consensus       374 ~~l~e  378 (381)
T d1elua_         374 ARLAD  378 (381)
T ss_dssp             HHHTT
T ss_pred             HHHHh
Confidence            99875

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=99.94  E-value=2.3e-26  Score=237.64  Aligned_cols=342  Identities=16%  Similarity=0.066  Sum_probs=225.9

Q ss_pred             cceeEecCCC-----CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673          103 KSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG  177 (529)
Q Consensus       103 ~~i~L~asen-----~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG  177 (529)
                      +.|+|..++.     ++|+.+++++...+.+.. .+|+.      .....++.+...+++.+.+|.+.+.  .+|.+++|
T Consensus        31 ~vi~l~~G~P~~~df~~p~~i~~a~~~a~~~~~-~~Y~~------~~G~~~LR~aia~~~~~~~g~~~~~--~~i~i~~G  101 (395)
T d1xi9a_          31 KVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGH-NYYGD------SEGLPELRKAIVEREKRKNGVDITP--DDVRVTAA  101 (395)
T ss_dssp             CCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTC-CSCCC------TTCCHHHHHHHHHHHHHHHCCCCCG--GGEEEESH
T ss_pred             CeEECCCCCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHhhhhcccccccc--cccccccc
Confidence            5689987763     468899999998875432 23433      2223466666678899999987543  36777888


Q ss_pred             H-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcEE
Q 009673          178 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLI  255 (529)
Q Consensus       178 s-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pklI  255 (529)
                      + +++.+++.++++|||+|++++|.|..+.        ..+...|.  +++.++.+. +++.+|++++++.+.+ +++++
T Consensus       102 ~~~~~~~~~~~~~~~Gd~vlv~~P~y~~~~--------~~~~~~g~--~~v~v~~~~~~~~~~d~~~~~~~~~~-~~~~v  170 (395)
T d1xi9a_         102 VTEALQLIFGALLDPGDEILVPGPSYPPYT--------GLVKFYGG--KPVEYRTIEEEDWQPDIDDIRKKITD-RTKAI  170 (395)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEEESCCHHHH--------HHHHHTTC--EEEEEEEEGGGTSEECHHHHHHHCCT-TEEEE
T ss_pred             cchhhhhhhhhhcCCCCEEEEcCCccccch--------hhhhhcCC--EEEEEeccccccccchHHHHHHhhcc-cccEE
Confidence            7 8999999999999999999999875442        13345565  555555432 3578999999999987 89999


Q ss_pred             EEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC---c-ccEEEecccccc--cCCCCeEE
Q 009673          256 IAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK---Y-CDVVTTTTHKSL--RGPRGGMI  324 (529)
Q Consensus       256 i~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~---~-aDiv~~S~hK~l--~GprgG~i  324 (529)
                      +++.|+||+  ..   .+++|.++|++||++++.|+++ ..+.+.+....+..   . --+++.|++|++  +|+|.||+
T Consensus       171 ~l~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRvG~~  249 (395)
T d1xi9a_         171 AVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIY-DLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYM  249 (395)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTT-TTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEE
T ss_pred             EecCCCCCccchhhHHHHHHHHhhhhhcCeeEEecccc-ccccccccccchhhcCCCCCEEEEeCcchhcccchhhcEee
Confidence            999999997  33   4678889999999999999984 44444332222211   1 127889999975  79999998


Q ss_pred             EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCC
Q 009673          325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN  404 (529)
Q Consensus       325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~  404 (529)
                      ++.........+.+........ ..+.+...++++. .++.. ....+++.++.+.++++.+.+.|.+.+...+..+..+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~-~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~gg  326 (395)
T d1xi9a_         250 YFVDPENKLSEVREAIDRLARI-RLCPNTPAQFAAI-AGLTG-PMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGA  326 (395)
T ss_dssp             EEECTTCTTHHHHHHHHHHHHH-TCCSCSHHHHHHH-HHHHS-CCHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBS
T ss_pred             EecCHHHHHHHHHHHHHHhhcC-CCCcCHHHHHHHH-HHhcC-CHHHHHHHHHHHHHHHHHHHHHHHhCCCceecCCCee
Confidence            8764321111122221111100 1122233344332 24432 2234577788889999999999998654333322346


Q ss_pred             ceEEEccCCC-CCcH-HHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          405 HLVLVDLRPM-GIDG-ARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       405 ~~~~v~~~~~-~i~~-~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +++|++++.. ..+. +.+.++|+++||.+.    ||.. ++..++++||++.      .+++++++.++.|.++++
T Consensus       327 ~~~~~~l~~~~~~~~~~~~~~ll~~~gV~v~----PG~~Fg~~~~~~~Ris~~------~~~e~l~eal~rl~~~l~  393 (395)
T d1xi9a_         327 FYIFPKIEVGPWKNDKEFVLDVLHNAHVLFV----HGSGFGEYGAGHFRAVFL------PPIEILEEAMDRFEKFMK  393 (395)
T ss_dssp             SEECCEECSCSCSSHHHHHHHHHHHHCEECE----EGGGGCGGGTTBEEEECC------SCHHHHHHHHHHHHHHHH
T ss_pred             EEEeEECCCCCCCCHHHHHHHHHHhCCEEEE----cChhhCCCCCCEEEEEec------CCHHHHHHHHHHHHHHHh
Confidence            7778777532 2244 446677889999984    4443 2234678999862      347888888888888775

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.2e-25  Score=231.03  Aligned_cols=336  Identities=15%  Similarity=0.115  Sum_probs=235.1

Q ss_pred             cceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673          103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF  182 (529)
Q Consensus       103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~  182 (529)
                      ..+.++|++..+++.|++||....        .+.|   +.++.+.++ .+++++++++|++.+.  ..+...|||+++.
T Consensus        19 ~~~l~~pGP~~~~~~Vl~am~~~~--------i~HR---s~~f~~i~~-ea~~~l~~llg~~~~~--~ii~~gsgT~a~~   84 (388)
T d1h0ca_          19 NQLLLGPGPSNLPPRIMAAGGLQM--------IGSM---SKDMYQIMD-EIKEGIQYVFQTRNPL--TLVISGSGHCALE   84 (388)
T ss_dssp             CCEECSSSCCCCCHHHHHHHTCCC--------CCTT---SHHHHHHHH-HHHHHHHHHHTCCCSE--EEEESSCHHHHHH
T ss_pred             cCccccCCCCCCCHHHHHHhCcCC--------CCCC---CHHHHHHHH-HHHHHHHHHhCCCCCc--EEEEcCcHHHHHH
Confidence            346788899899999999996322        1222   235555444 5789999999998642  2344567789999


Q ss_pred             HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673          183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY  262 (529)
Q Consensus       183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~  262 (529)
                      +++..++.+||++++....+.+.....      .....+  ...+.+..+ +...+|.+++++.+...+++++++.+.+|
T Consensus        85 ~~i~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~n  155 (388)
T d1h0ca_          85 AALVNVLEPGDSFLVGANGIWGQRAVD------IGERIG--ARVHPMTKD-PGGHYTLQEVEEGLAQHKPVLLFLTHGES  155 (388)
T ss_dssp             HHHHHHCCSSCCEEECBSSHHHHHHHH------HHHHHC----CBCCBCC-TTCCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred             HHHHHhhccCCceeeecccceeeeecc------cccccc--ccccccccC-CccccchHHHHHHhccCCcceEEEeeeee
Confidence            999999999999998876443321100      111122  233344333 45688999998888777999999886544


Q ss_pred             CC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhh
Q 009673          263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA  339 (529)
Q Consensus       263 p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~  339 (529)
                      .+  ..|+++|.++|+++|+++++|++|+.|....+....   ++|++++|.|||+.||.| |+++.+++      ..+.
T Consensus       156 ~tG~i~pi~~i~~~~~~~g~~~~vD~~qs~g~~~~d~~~~---~~D~~~~s~~K~~~gp~g~~~~~~~~~------~~~~  226 (388)
T d1h0ca_         156 STGVLQPLDGFGELCHRYKCLLLVDSVASLGGTPLYMDRQ---GIDILYSGSQKALNAPPGTSLISFSDK------AKKK  226 (388)
T ss_dssp             TTTEECCCTTHHHHHHTTTCEEEEECTTTTTTSCCCTTTT---TCSEEEEESSSTTCCCTTCEEEEECHH------HHHH
T ss_pred             ccccccCHHHHHHHhhcccccceecccccccccccccccc---ccceecccccccccCCCceEEEeecHH------HHHh
Confidence            43  889999999999999999999999998775443322   689999999999999999 77777652      2222


Q ss_pred             hcc----------------------cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEE
Q 009673          340 INN----------------------AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL  397 (529)
Q Consensus       340 i~~----------------------~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v  397 (529)
                      +..                      .......++|+...+.++..+++.....+.+...++..+..+.+.+.+...|+.+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~al~~~~~~g~~~~~~~~~~l~~~l~~~~~~~g~~~  306 (388)
T d1h0ca_         227 MYSRKTKPFSFYLDIKWLANFWGCDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGLQL  306 (388)
T ss_dssp             HTTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCB
T ss_pred             hhhccccccccccccchhhhhhhhccccccccccccHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHhhcCccc
Confidence            110                      1112235678888888888888877666677888888888999999998888766


Q ss_pred             ecCCC---CCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccC-CCccCCCCHHHHHHHHHH
Q 009673          398 VSGGS---DNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSP-AMTTRGFSEKEFVAIADF  472 (529)
Q Consensus       398 ~~~gt---~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~-~~tt~g~~~~d~~~la~~  472 (529)
                      ..+..   ...++.+.+ +.+++..++.+.| +++||.+..+.     .....+.||||+. ..+    +++|+++++++
T Consensus       307 ~~~~~~~rs~~i~~~~~-p~~~~~~~~~~~L~~~~gI~v~~G~-----~~~~~~~iRis~~g~~~----t~edid~li~a  376 (388)
T d1h0ca_         307 FVKDPALRLPTVTTVAV-PAGYDWRDIVSYVIDHFDIEIMGGL-----GPSTGKVLRIGLLGCNA----TRENVDRVTEA  376 (388)
T ss_dssp             SSCSGGGBCTTEEEEEC-CTTCCHHHHHHHHHHHHCEECEECC-----GGGTTTEEEEECCGGGC----SHHHHHHHHHH
T ss_pred             ccCCHHHcCCeEEEEEC-CCCCCHHHHHHHHHhcCCEEEeCCc-----hhhcCCEEEEeCCCCCC----CHHHHHHHHHH
Confidence            54311   122334444 4577887776665 66799986542     1233568999953 334    47999999999


Q ss_pred             HHHHHHHH
Q 009673          473 IHEGVEIT  480 (529)
Q Consensus       473 i~~~~~~~  480 (529)
                      |+++++..
T Consensus       377 L~~~L~~l  384 (388)
T d1h0ca_         377 LRAALQHC  384 (388)
T ss_dssp             HHHHHHHS
T ss_pred             HHHHHHHh
Confidence            99998854

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=99.94  E-value=3.2e-25  Score=230.64  Aligned_cols=364  Identities=12%  Similarity=0.030  Sum_probs=239.1

Q ss_pred             hhhcccCChHHHHHHHHHHHHhhcceeEecCCC--CCcHHHHHHHhhhhhcc--CCCCCCCCCCCCCchhHHHHHHHHHH
Q 009673           80 DYSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNK--YSEGLPGKRYYGGNEYIDELETLCQK  155 (529)
Q Consensus        80 ~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen--~~~~~V~eal~~~l~~~--y~~G~p~~r~~~g~~~~d~lE~~a~~  155 (529)
                      ..+++...+.+|..+.+.. .+.+.|+|..++.  .+|+.+++++...+.+.  ...+|+.   ..|   ..++.+...+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~-~~~~~I~L~~G~Pd~~~p~~i~eal~~a~~~~~~~~~~Y~~---~~G---~~~lReaiA~   77 (418)
T d2r5ea1           5 PKRYQGSTKSVWVEYIQLA-AQYKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTR---GFG---HPRLVQALSK   77 (418)
T ss_dssp             CGGGTTCCCCHHHHHHHHH-HHHCCEECSSSCCSSCCCHHHHHHHHHHHTCSCGGGGSCCC---TTC---CHHHHHHHHH
T ss_pred             hhhhcCCCCCHHHHHHHHh-cCCCCEEccCCCCCCCCCHHHHHHHHHHHhCCCccCcCCCC---CCC---CHHHHHHHHH
Confidence            4567788888886665433 2457899988774  36788999998877532  1223432   112   2356666668


Q ss_pred             HHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC
Q 009673          156 RALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES  234 (529)
Q Consensus       156 ~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~  234 (529)
                      ++++.+|.+.+.- .+|.+|+|+ +|+..++.++++|||.|++++|.|.++..        .+...|.  +++.++++++
T Consensus        78 ~~~~~~g~~~~p~-~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~  146 (418)
T d2r5ea1          78 LYSQLVDRTINPM-TEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEP--------MVKAAGG--IPRFIPLKPN  146 (418)
T ss_dssp             HHHHHHTSCCCTT-TSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECEES
T ss_pred             HHHHHhCCCCCcc-ceEEEcCCCchhhhhhhhhccccccceeccccccchhhH--------HHHHcCC--eEEEEEeccc
Confidence            8999999874311 257789998 99999999999999999999998765431        2334454  4444444332


Q ss_pred             ---------CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673          235 ---------TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD  300 (529)
Q Consensus       235 ---------~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~  300 (529)
                               .+.++.+++.+.... ++++++++.++||+  ..   .+++|.++|++||+++|.|+++ ..+...+....
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~p~NPtG~~~s~e~~~~l~~~a~~~~~~iI~De~y-~~~~~~~~~~~  224 (418)
T d2r5ea1         147 KTGGTISSADWVLDNNELEALFNE-KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVY-EHMVFEPFEHI  224 (418)
T ss_dssp             CCSSCEEGGGEECCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTT-TTCBCTTCCCC
T ss_pred             ccccchhhhhhhhhHHHHhhhhhc-cccceecCCcCccccccccHHHHHHHhhhhhcCCeeeecccch-hhhccCCCccc
Confidence                     245788998888766 88999999999997  33   4677889999999999999985 34443332111


Q ss_pred             CC---C---cccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh-----
Q 009673          301 PF---K---YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA-----  367 (529)
Q Consensus       301 ~~---~---~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~-----  367 (529)
                      ++   .   ..-+++.|++|++  +|+|.||+++++      ++.+.+.........+.+...+.+++. .+...     
T Consensus       225 s~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~------~~i~~~~~~~~~~~~~~~~~~q~a~~~-~l~~~~~~~~  297 (418)
T d2r5ea1         225 RICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPE------ALLKNLQMVHQNCVYTCATPIQEAIAV-GFETELKRLK  297 (418)
T ss_dssp             CGGGSTTTGGGEEEEEEHHHHTTCGGGCCEEEESCH------HHHHHHHHHHTTTTCSCCHHHHHHHHH-HHHHHHTTTT
T ss_pred             cccccccccceeeeeecCCccccCCCcccccccccc------hhhhhhhhcccccccccccchhhhccc-cccccccccc
Confidence            11   1   1227789999985  899999999988      676666543322223444444433322 22211     


Q ss_pred             -cCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCC-----------CCCcHHH-HHHhHhcCCeEEcC
Q 009673          368 -QSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP-----------MGIDGAR-VEKILDMASITLNK  434 (529)
Q Consensus       368 -~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~-----------~~i~~~~-~~~~L~~~GI~v~~  434 (529)
                       ....+.+.++.+..+++.+.+.|++.|+.+..+ ..++++|+++..           ...+..+ +..+|+++||.+.+
T Consensus       298 ~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~P-~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~P  376 (418)
T d2r5ea1         298 SPECYFNSISGELMAKRDYMASFLAEVGMNPTVP-QGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIP  376 (418)
T ss_dssp             STTSHHHHHHHHHHHHHHHHHHHHHHTTCEEEEC-SBSSEEEEECGGGSTTCCGGGCCCSSHHHHHHHHHHHHHSEECBC
T ss_pred             cchhhHHHHHHHHHHhhhhHHhhHhhcCCcccCC-CceeEEEEEcccccccccchhcccccCHHHHHHHHHHHCCEEEeC
Confidence             122346777888889999999999999987765 345777887742           1123334 45566889999944


Q ss_pred             CCCCCCC--CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          435 NSVPGDK--SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       435 ~~~Pg~~--~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      +...+..  ...++++|||++.      .+++++++..++|++.+
T Consensus       377 G~~F~~~~~~~~g~~~iRis~~------~~~e~l~~a~~rl~~~l  415 (418)
T d2r5ea1         377 PSAFYSEPNKHLGEDFVRYCFF------KKDENLQKAAEILRKWK  415 (418)
T ss_dssp             GGGGSCGGGHHHHTTEEEEECC------SCHHHHHHHHHHHHHHH
T ss_pred             chhhCCCCCccCCCCEEEEEec------CCHHHHHHHHHHHHHHH
Confidence            3211111  0112468999962      34788888888887754

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=6.9e-25  Score=224.53  Aligned_cols=338  Identities=19%  Similarity=0.182  Sum_probs=227.8

Q ss_pred             cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHh-
Q 009673          109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA-  187 (529)
Q Consensus       109 asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~a-  187 (529)
                      ++..++|+.|+|++..++.+.|  ++|+..+..+.+..+.++ .+++++++++|++++++   +...++|+++..++.+ 
T Consensus         8 a~~~~~p~~v~ea~~~~~~~~~--~np~~~~~~~~~~~~~~~-~aR~~ia~l~~~~~~~i---~~~~~~T~~l~~~~~~~   81 (376)
T d1eg5a_           8 NATTRVDDRVLEEMIVFYREKY--GNPNSAHGMGIEANLHME-KAREKVAKVLGVSPSEI---FFTSCATESINWILKTV   81 (376)
T ss_dssp             TTCCCCCHHHHHHHHHHHHTCC--CCTTCSSHHHHHHHHHHH-HHHHHHHHHHTSCGGGE---EEESCHHHHHHHHHHHH
T ss_pred             cccccCCHHHHHHHHHHHHHcC--CCCccccHHHHHHHHHHH-HHHHHHHHHcCCCCCcE---EEECCHHHHHHhhhhcc
Confidence            5667899999999999998776  466655544444455555 57899999999998742   2234445887776653 


Q ss_pred             ---hcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC
Q 009673          188 ---ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR  264 (529)
Q Consensus       188 ---ll~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~  264 (529)
                         ...+||.|++....++.+....     +.+...|  ++++.+|++ +++.+|++++++++++ +|++|++++.++++
T Consensus        82 ~~~~~~~g~~v~~~~~~~~~~~~~~-----~~~~~~g--~~v~~vp~~-~~~~id~~~l~~~i~~-~t~lv~is~v~~~t  152 (376)
T d1eg5a_          82 AETFEKRKRTIITTPIEHKAVLETM-----KYLSMKG--FKVKYVPVD-SRGVVKLEELEKLVDE-DTFLVSIMAANNEV  152 (376)
T ss_dssp             HHHTTTTCCEEEECTTSCHHHHHHH-----HHHHHTT--CEEEECCBC-TTSCBCHHHHHHHCCT-TEEEEEEESBCTTT
T ss_pred             cccccccCcccccccccchhhHHHH-----HHHHhcC--CEEEEEcCC-CCCeECHHHHHHhcCC-CceEEEEECCcccc
Confidence               4678889988877665443211     1122234  477788887 4689999999999988 99999998766554


Q ss_pred             --CCCHHHHHHHHHHh--CCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhh
Q 009673          265 --DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA  339 (529)
Q Consensus       265 --~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~  339 (529)
                        ..|++++.++++.+  |+++++|++|+.|.+..+....   ++|++++|+|||+ ||+| |+++.+++.        .
T Consensus       153 G~~~~~~~i~~~~~~~~~~~~~~vD~~q~~g~~~~d~~~~---~~D~~~~s~~K~~-gp~G~~~l~~~~~~--------~  220 (376)
T d1eg5a_         153 GTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKL---EVDYASFSAHKFH-GPKGVGITYIRKGV--------P  220 (376)
T ss_dssp             CBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTT---CCSEEEEEGGGGT-SCTTCEEEEECTTS--------C
T ss_pred             ceeeeehhhhhhhhhcccCceeEEEeeecccccccccccc---Cccceecccceee-cCCCceeEEeccCc--------c
Confidence              78999999998766  8999999999999876553332   5899999999995 8888 888887741        1


Q ss_pred             hccccc------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCC
Q 009673          340 INNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP  413 (529)
Q Consensus       340 i~~~~~------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~  413 (529)
                      ++....      ....|.++.......+.+..... ...............++.+.|...+..+..+..........+..
T Consensus       221 ~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  299 (376)
T d1eg5a_         221 IRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAV-EELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSF  299 (376)
T ss_dssp             CCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEEC
T ss_pred             cCCcccCCCCcccccCCcccchhhhhHHHHhhccc-cchhhhhhhhhhhhhhhccccccccccccccccccccceeeecc
Confidence            211111      11134445555554444444332 23445556666667778888877665555432222222222333


Q ss_pred             CCCcHHHHHHhHhcCCeEEcCCCC--CCCCCC------------CCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          414 MGIDGARVEKILDMASITLNKNSV--PGDKSA------------LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       414 ~~i~~~~~~~~L~~~GI~v~~~~~--Pg~~~~------------~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .++++..+...|++.||.++.+..  +++..+            ..++.||||.+.+||    ++|++++++.|+++++
T Consensus       300 ~~~~~~~~~~~L~~~gI~vr~G~~c~~~~~~~~~~l~~~gi~~~~~~~~iRiS~~~ynt----~edid~l~~~L~~iv~  374 (376)
T d1eg5a_         300 PNIRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNT----EEEVDYFLKKIEEILS  374 (376)
T ss_dssp             TTCCHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCC----HHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHhhCCeEEeCcchhcCCccchhHHHHHcCCCcccCCCEEEEecCCCCC----HHHHHHHHHHHHHHHh
Confidence            467788999999999999865421  211100            012469999887775    8999999999999876

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=8.5e-26  Score=230.81  Aligned_cols=350  Identities=16%  Similarity=0.115  Sum_probs=225.8

Q ss_pred             hhcccCChHHHHHHHHHHHHhhcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 009673           81 YSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL  158 (529)
Q Consensus        81 ~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la  158 (529)
                      .++....+.++..+.. ..+....|+|..+++  ++|+.+++|+...+...  .+|+.   ..|.   .+++    +.++
T Consensus         5 ~~~~~~~~~~~~~~~~-la~~~~~I~ls~g~p~~~~p~~i~~al~~~l~~~--~~Y~~---~~G~---~elr----~aiA   71 (368)
T d1v2da_           5 PRTEAAKESIFPRMSG-LAQRLGAVNLGQGFPSNPPPPFLLEAVRRALGRQ--DQYAP---PAGL---PALR----EALA   71 (368)
T ss_dssp             GGGGGC---CHHHHHH-HHHHHTCEECCCCSCSSCCCHHHHHHHHHHTTTS--CSCCC---TTCC---HHHH----HHHH
T ss_pred             hhhhhcCCCHHHHHHH-HhccCCCEEecCCCCCCCCCHHHHHHHHHHhhcc--cCCCC---CcCC---HHHH----HHHH
Confidence            3445556666665542 233345789976553  57899999999877532  24443   1222   2443    5677


Q ss_pred             HHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCC
Q 009673          159 AAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL  237 (529)
Q Consensus       159 ~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~  237 (529)
                      +.++++++    +|.+++|+ +++..++.+++++||.|++.+|.|..+..        .....|.....++++...+++.
T Consensus        72 ~~~~~~~~----~Iiit~G~~~al~~~~~~l~~~~d~v~~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~  139 (368)
T d1v2da_          72 EEFAVEPE----SVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLP--------DAFLAGAKARLVRLDLTPEGFR  139 (368)
T ss_dssp             HHHTSCGG----GEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEECEEETTEEE
T ss_pred             hhcccCCc----ceeeccchHHHHHHHhhccccccccccccCCcchhhhh--------HHHhcCCccceecccccccccc
Confidence            88999886    45567766 99999999999999999999997764432        2334555444555544444578


Q ss_pred             CCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC---CcccEEE
Q 009673          238 VDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYCDVVT  309 (529)
Q Consensus       238 iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~~aDiv~  309 (529)
                      +|++++++.+++ +++++++++|+||+  ..   ++++|.++|++||+++++|+++... ......+...   ....+++
T Consensus       140 ~d~~~l~~~~~~-~~~~i~~~~p~NPtG~~~~~~~l~~l~~~a~~~~i~ii~D~~~~~~-~~~~~~~~~~~~~~~~~~~~  217 (368)
T d1v2da_         140 LDLSALEKALTP-RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDEL-YYGERPRRLREFAPERTFTV  217 (368)
T ss_dssp             CCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTC-BSSSCCCCHHHHCTTTEEEE
T ss_pred             CCHHHHHHhhcc-CceEEEEcCCCCcccccCCHHHHHHHHHHHHHcCCeeeechhhhhh-ccccccccccccccccccee
Confidence            999999999987 78999999999997  44   4788999999999999999975432 2221111111   1123666


Q ss_pred             eccccc--ccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHH
Q 009673          310 TTTHKS--LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-SPEFKVYQNKVVSNCRAL  386 (529)
Q Consensus       310 ~S~hK~--l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-~~~~~~~~~~i~~~a~~l  386 (529)
                      .|++|.  ++|+|.|+++.++      ++.+.+.........+.....+.++ +.++.... ....+..++.+.++++.+
T Consensus       218 ~~~sk~~~~~G~R~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~l  290 (368)
T d1v2da_         218 GSAGKRLEATGYRVGWIVGPK------EFMPRLAGMRQWTSFSAPTPLQAGV-AEALKLARREGFYEALREGYRRRRDLL  290 (368)
T ss_dssp             EEHHHHTTCGGGCCEEEECCT------TTHHHHHHHHHHHTSSCCHHHHHHH-HHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred             ecccccccccccccccccccc------cccchhhhhhhcccccccccccccc-ccccccccchhhHHHHHHHHHHhhhhh
Confidence            777765  4789999999988      4554443322111122323333222 22333221 234467777789999999


Q ss_pred             HHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHH
Q 009673          387 ASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEF  466 (529)
Q Consensus       387 ~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~  466 (529)
                      .+.|++.|+.+..+. .++++|++++  +.+   ..++|+++||.+.++...+.. ...+++|||++.      .+++++
T Consensus       291 ~~~l~~~g~~~~~p~-g~~~~~~~l~--~~~---~~~ll~~~gI~v~pg~~F~~~-~~~~~~iRis~~------~~~e~i  357 (368)
T d1v2da_         291 AGGLRAMGLRVYVPE-GTYFLMAELP--GWD---AFRLVEEARVALIPASAFYLE-DPPKDLFRFAFC------KTEEEL  357 (368)
T ss_dssp             HHHHHHTTCCEECCS-BSSEEEEECT--TCC---HHHHHHHTCEECEEGGGGCSS-SCCTTEEEEECC------SCHHHH
T ss_pred             hhhHHhcCcEEecCC-ceeEEEEeCC--ccH---HHHHHHhCCEEEEechhhCCC-CCCCCEEEEEec------CCHHHH
Confidence            999999999887652 3567788875  334   345788999999543221111 123678999853      357899


Q ss_pred             HHHHHHHHHHH
Q 009673          467 VAIADFIHEGV  477 (529)
Q Consensus       467 ~~la~~i~~~~  477 (529)
                      ++..++|++++
T Consensus       358 ~~ai~rL~~~l  368 (368)
T d1v2da_         358 HLALERLGRVV  368 (368)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHhC
Confidence            99999888763

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.93  E-value=5.2e-25  Score=223.66  Aligned_cols=325  Identities=14%  Similarity=0.141  Sum_probs=196.6

Q ss_pred             CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHH-----HHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 009673          110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDE-----LETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV  184 (529)
Q Consensus       110 sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~-----lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~  184 (529)
                      ..+.+++++++|+.+     |..||...++..+.. .+.     +-+..++++++++|.+.    + +.+.+|++||+++
T Consensus        10 ~~~~l~~~a~~a~~~-----~~~g~~~~~~~~~~~-~~~~~~~~l~~~~~~~~A~~~g~e~----~-~~t~g~t~a~~~~   78 (364)
T d2e7ja1          10 TGGKLTEEARQALLE-----WGDGYSVCDFCTTGR-LDEIKTPPIHDFIHNQLPKFLGCDV----A-RVTNGAREAKFAV   78 (364)
T ss_dssp             HTCCCCHHHHHHHHH-----C---------------------CCHHHHHHTHHHHHTTSSE----E-EEESSHHHHHHHH
T ss_pred             cCCcCCHHHHHHHHH-----HhcCCchhccccccc-cccccChHHHHHHHHHHHHHhCcCE----E-EEECcHHHHHHHH
Confidence            456788999999874     445555444322111 111     22234488999999874    2 3345667999999


Q ss_pred             HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhc----CCcEEEEcC
Q 009673          185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILF----RPKLIIAGA  259 (529)
Q Consensus       185 l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~----~pklIi~~~  259 (529)
                      +.++++|||+|+++.++|.+++.        .+...|.  +++.++++. .++.+|++++++++++.    ++++|++++
T Consensus        79 ~~al~~~gd~Vi~~~~~h~s~~~--------~~~~~g~--~v~~v~~~~~~~~~i~~~~l~~~i~~~~k~~~~~lv~i~~  148 (364)
T d2e7ja1          79 MHSLAKKDAWVVMDENCHYSSYV--------AAERAGL--NIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITY  148 (364)
T ss_dssp             HHHHCCTTCEEEEETTCCHHHHH--------HHHHTTC--EEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEES
T ss_pred             HHHHhCCCcEEEeecccccccch--------HHHhccc--eEEEeeeccccccccCHHHHHhhhhhhcccCCceEEEeec
Confidence            99999999999999988755431        2344566  555555542 35789999999999763    235777777


Q ss_pred             CCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHH
Q 009673          260 SAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL  336 (529)
Q Consensus       260 s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l  336 (529)
                      ++|++  ..|+++|.++|++||+++++|++|..|.+..+....   ++|++++|+||+++++.+ |+++++++      +
T Consensus       149 ~~n~tG~~~~l~~I~~ia~~~~i~livD~a~~~g~~~~~~~~~---g~D~~~~S~~K~~~~~g~~g~l~~~~~------~  219 (364)
T d2e7ja1         149 PDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEI---GADFIVGSGHKSMAASGPIGVMGMKEE------W  219 (364)
T ss_dssp             SCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHH---TCSEEEEEHHHHSSCCSSCEEEEECTT------T
T ss_pred             CCCCCceeecchhheeccccccchhhccccchhhhhhhccccc---ccceeeeccccccCCCCCEEEEEECHH------H
Confidence            76664  789999999999999999999999877653221111   689999999999977654 89998873      4


Q ss_pred             HhhhcccccCC-------CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc-eEE
Q 009673          337 ESAINNAVFPG-------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH-LVL  408 (529)
Q Consensus       337 ~~~i~~~~~p~-------~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~-~~~  408 (529)
                      .+.+.....++       ..+......+.++..+++... ...+.+ .+..++++++.+.|.+.|+.++......+ ..+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~-~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~  297 (364)
T d2e7ja1         220 AEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVR-ERIKRW-DEEVEKARRFAAEMEKLGIKQLGDNPHNHDLMF  297 (364)
T ss_dssp             TTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHH-HHGGGH-HHHHHHHHHHHHHHHHTTCEEESSSSCCSSEEE
T ss_pred             HHHHHhhccccCcccccccccccchhHHHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHcCCeecCCCCCCcceEE
Confidence            33332111111       111111222223333443321 111222 33356778899999998988775322222 233


Q ss_pred             EccCC-------CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          409 VDLRP-------MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       409 v~~~~-------~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +....       .......+...|...|+..-   .||     ....+|+++     .+.+++|++++++.|++++++
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~g-----~~~~~~~~~-----~~~t~edid~~~~~l~ei~~~  362 (364)
T d2e7ja1         298 FHAEVLYEISKKAKGGRFFLYRELKSRKIHGI---KPG-----LTRYFKLST-----YGLSDEEVDYVLNAFKEIIEK  362 (364)
T ss_dssp             EECHHHHHHHHHSSSGGGHHHHHHHHTTEECS---CTT-----CCSEEEEEC-----TTCCHHHHHHHHHHHHHHHHH
T ss_pred             EeccchHHHHHHhhccchHHHHHHHhcCCcee---cCC-----CcceEEEec-----cCCCHHHHHHHHHHHHHHHHH
Confidence            32210       00012234455666676542   122     235677764     346789999999999998874

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=99.93  E-value=7.4e-25  Score=224.33  Aligned_cols=331  Identities=17%  Similarity=0.124  Sum_probs=222.4

Q ss_pred             hcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673          102 FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-  178 (529)
Q Consensus       102 ~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-  178 (529)
                      ++.|+|..+++  ++|+.+++++...+.+.. .+|+.      ..-..++++...+++.+.+|.+.+.  .+|.+++|+ 
T Consensus        28 ~~vI~l~~G~p~~~~p~~i~~~~~~~~~~~~-~~Y~~------~~G~~~lR~aia~~~~~~~~~~~~~--~~i~~t~G~~   98 (375)
T d1o4sa_          28 EDVINLTAGEPDFPTPEPVVEEAVRFLQKGE-VKYTD------PRGIYELREGIAKRIGERYKKDISP--DQVVVTNGAK   98 (375)
T ss_dssp             CCCEECCCSSCSSCCCHHHHHHHHHHHTTCC-CCCCC------TTCCHHHHHHHHHHHHHHHTCCCCG--GGEEEESHHH
T ss_pred             CCeEECCCcCCCCCCCHHHHHHHHHHHhcCC-cCCCC------CcCCHHHHHHHHhhhhhcccccccc--ccccccCcHH
Confidence            35789988775  368999999988776543 23433      2223466666778888888887543  356677877 


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcEEEE
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIA  257 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pklIi~  257 (529)
                      +|+..++.++++|||+|++++|.+..+..        .....+.  ..+.++.+. +.+.+|.+.++..... +++++++
T Consensus        99 ~al~~~~~~l~~~gd~vlv~~P~y~~~~~--------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l  167 (375)
T d1o4sa_          99 QALFNAFMALLDPGDEVIVFSPVWVSYIP--------QIILAGG--TVNVVETFMSKNFQPSLEEVEGLLVG-KTKAVLI  167 (375)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECCGGGTTCCCHHHHHHTCCT-TEEEEEE
T ss_pred             HHHHHHHHHHhCCCCEEEEccCccccchh--------hhhcccc--ccccccccccccccchhHHHHHhhcc-CccEEEE
Confidence            99999999999999999999998765432        2223444  333333332 3578899999888777 8899999


Q ss_pred             cCCCCCC--C---CCHHHHHHHHHHhCCEEEEecccccccccccccCCCC---C--cccEEEecccccc--cCCCCeEEE
Q 009673          258 GASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTHKSL--RGPRGGMIF  325 (529)
Q Consensus       258 ~~s~~p~--~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~--~aDiv~~S~hK~l--~GprgG~i~  325 (529)
                      ++|+||+  .   ..+++|.++|++|+++||.|+++. .+........++   +  .--++++|++|++  +|+|.||++
T Consensus       168 ~nP~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~G~R~G~~~  246 (375)
T d1o4sa_         168 NSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYD-SLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLI  246 (375)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT-TSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEE
T ss_pred             eCCCCCccCCCCHHHHHHHHHhHHHcCCceehHhhhc-cccccccccccccccCCCCCEEEEeechhhccCCcccccccc
Confidence            9999997  2   257788899999999999999743 333222111111   1  1238889999975  799999999


Q ss_pred             eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc
Q 009673          326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH  405 (529)
Q Consensus       326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~  405 (529)
                      +++      ++.+.+...........+.....    .+.... ........+.+.++++.+.+.|++.|+++..+ ..++
T Consensus       247 ~~~------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~r~~~~~~~l~~~g~~~~~p-~gg~  314 (375)
T d1o4sa_         247 SSE------KVATAVSKIQSHTTSCINTVAQY----AALKAL-EVDNSYMVQTFKERKNFVVERLKKMGVKFVEP-EGAF  314 (375)
T ss_dssp             CCH------HHHHHHHHHHHHHTCSCCHHHHH----HHHHHT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC-SBSS
T ss_pred             ccc------cchhhhhhhhccccccccccchh----hhhhhc-ccchhhhHHHHHHHHHHHHHHHHhcCceEecC-CccE
Confidence            988      55554433221111111111111    122222 23345667778888999999999999987654 3456


Q ss_pred             eEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          406 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       406 ~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ++|++++.  -+.+.+.++|+++||.+.    ||+.. ..+++|||++.      .+++++++..+.|+++++
T Consensus       315 f~~~~~~~--~~~~~~~~ll~~~gV~v~----pG~~F-~~~g~iRis~~------~~~e~l~~al~rl~~~l~  374 (375)
T d1o4sa_         315 YLFFKVRG--DDVKFCERLLEEKKVALV----PGSAF-LKPGFVRLSFA------TSIERLTEALDRIEDFLN  374 (375)
T ss_dssp             EEEEECSS--CHHHHHHHHHHHHCEECE----EGGGG-TCTTEEEEECC------SCHHHHHHHHHHHHHHHT
T ss_pred             EEEEECCC--CHHHHHHHHHHhCCEEEE----Ecccc-CCCCeEEEEEc------CCHHHHHHHHHHHHHHhc
Confidence            77888753  244567777889999995    44331 13678999863      357888888888888764

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=8.8e-25  Score=227.32  Aligned_cols=363  Identities=11%  Similarity=0.046  Sum_probs=240.3

Q ss_pred             hhhcccCChHHHHHHHHHHHHhhcceeEecCCC--CCcHHHHHHHhhhhhccC-CCCCCCCCCCCCchhHHHHHHHHHHH
Q 009673           80 DYSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKY-SEGLPGKRYYGGNEYIDELETLCQKR  156 (529)
Q Consensus        80 ~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen--~~~~~V~eal~~~l~~~y-~~G~p~~r~~~g~~~~d~lE~~a~~~  156 (529)
                      .++|..+++..|..+.+- ....+.|+|..++.  ++|+.+++++...+.+.. ..+|+.      ..-..++.+...++
T Consensus         4 ~~r~~~~~~~~~~~~~~~-~~~~dvI~l~~G~p~~~~p~~v~~a~~~al~~~~~~~~Y~~------~~G~~~LReaia~~   76 (418)
T d1w7la_           4 ARRLDGIDYNPWVEFVKL-ASEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTK------TFGYPPLTKILASF   76 (418)
T ss_dssp             CGGGTTCCCCTHHHHHHH-HHTSCCEECCCCSCSSCCCHHHHHHHHHHTSSCGGGGSCCC------TTCCHHHHHHHHHH
T ss_pred             CccccCCCCCHHHHHHHH-hCCCCCEECCCCCCCCCCCHHHHHHHHHHHhCCCcccCCCC------CcCCHHHHHHHHHH
Confidence            356777788777544332 33457899988774  468899999988775432 123432      11234566666688


Q ss_pred             HHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC---
Q 009673          157 ALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD---  232 (529)
Q Consensus       157 la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~---  232 (529)
                      +.+.+|.+.+.. .+|.+|+|+ +|+..++.++++|||.|++++|.+..+..        .+...|.  +.+.++.+   
T Consensus        77 ~~~~~g~~~~~~-~~I~it~G~~~al~~~~~~l~~~g~~vlv~~p~~~~y~~--------~~~~~g~--~~v~~~~~~~~  145 (418)
T d1w7la_          77 FGELLGQEIDPL-RNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEP--------MTMMAGG--RPVFVSLKPGP  145 (418)
T ss_dssp             HHHHHTCCCCHH-HHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECEECC
T ss_pred             HHHHhCCCCCcc-cceeeccCcHHHHHHHHHhhccCCceeeccccccchhHH--------HHHHcCC--Eeecccccccc
Confidence            888899875311 257789998 99999999999999999999987765432        2233444  33333222   


Q ss_pred             --------CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          233 --------ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       233 --------~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                              .+++.+|.+++.....+ ++++|++++++||+  ..   .+++|.++|+++++++|+|++ |..+.+.+...
T Consensus       146 ~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~i~~~~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~-Y~~l~~~~~~~  223 (418)
T d1w7la_         146 IQNGELGSSSNWQLDPMELAGKFTS-RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEV-YQWMVYDGHQH  223 (418)
T ss_dssp             ---CCSEEGGGEECCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECT-TTTCBCTTCCC
T ss_pred             ccccccccccCcccchhhhhccccc-cccceeccCcCCcccccccHHHHHHHHHHHHhcCCCchhhhh-hHHhhcCCCCC
Confidence                    12356888888887776 77889999999997  33   577888999999999999998 55666544322


Q ss_pred             CCC---C-cc--cEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh---c
Q 009673          300 DPF---K-YC--DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA---Q  368 (529)
Q Consensus       300 ~~~---~-~a--Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~---~  368 (529)
                      .++   . ..  .+++.|++|.+  +|.|.||+++++      ++...+.+.......+.++..+.++.. ++...   .
T Consensus       224 ~~~~~~~~~~~~~i~~~S~SK~~~~pG~RvG~~v~~~------~~~~~l~~~~~~~~~~~~~~~q~~~~~-~l~~~~~~~  296 (418)
T d1w7la_         224 ISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPD------HIMKHLRTVHQNSVFHCPTQSQAAVAE-SFEREQLLF  296 (418)
T ss_dssp             CCGGGSTTTGGGEEEEEEHHHHTTCGGGCCEEEECCH------HHHHHHHHHHHTTTSCCCHHHHHHHHH-HHHHHHHTT
T ss_pred             CCHHHccccccccceecccCccccCCCCcccccccch------hhhhhhccccccccccccchhhHHHHH-Hhhhccccc
Confidence            222   1 22  37889999974  789999999988      666665544333333445554444332 33321   1


Q ss_pred             ---CchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCC------------CCC-cHHHHHHhHhcCCeEE
Q 009673          369 ---SPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP------------MGI-DGARVEKILDMASITL  432 (529)
Q Consensus       369 ---~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~------------~~i-~~~~~~~~L~~~GI~v  432 (529)
                         ...+..+.+.+.++++.+.+.|.+.|+++..+ ..++++|++++.            ... +.+.+.++|+++||.|
T Consensus       297 ~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~P-~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v  375 (418)
T d1w7la_         297 RQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPLIP-QGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVA  375 (418)
T ss_dssp             TSTTSHHHHHHHHHHHHHHHHHHHHHTTTCEEEEC-SBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEEC
T ss_pred             cccccccccchhhhhhhhhhhhhhhhhcCCcccCC-CceeEEEEECcccccccchhccccccccHHHHHHHHHHHCCEEE
Confidence               23346778888899999999999999987765 235777877631            011 2234667789999999


Q ss_pred             cCCCCCCCC--CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          433 NKNSVPGDK--SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       433 ~~~~~Pg~~--~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      .+++..+..  ....+++|||++.      .+++++++..++|++.
T Consensus       376 ~PG~~F~~~~~~~~~~~~iRis~~------~~~~~l~~a~~rl~~~  415 (418)
T d1w7la_         376 IPVSIFYSVPHQKHFDHYIRFCFV------KDEATLQAMDEKLRKW  415 (418)
T ss_dssp             EEGGGGSCHHHHTTSCSEEEEECC------CCHHHHHHHHHHHHHH
T ss_pred             EcchhhcCCCccCCCCCEEEEEEc------CCHHHHHHHHHHHHHH
Confidence            544322211  1234578999852      3578888888888654

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.93  E-value=1.1e-24  Score=226.04  Aligned_cols=345  Identities=17%  Similarity=0.147  Sum_probs=222.4

Q ss_pred             cceeEecCCC------CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCC-C---ceee
Q 009673          103 KSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENK-W---GVNV  172 (529)
Q Consensus       103 ~~i~L~asen------~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~-~---~~~V  172 (529)
                      +.|+|..+++      ++++.+++++...+......||+.   ..|.   .++.+.+.+++.+.++...+. +   ..+|
T Consensus        31 ~vI~L~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~---~~LReaia~~~~~~~~~~~~~~~~~~~~~I  104 (412)
T d1bw0a_          31 PIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFP---TVGS---PEAREAVATWWRNSFVHKEELKSTIVKDNV  104 (412)
T ss_dssp             CCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCC---TTCC---HHHHHHHHHHHHHHHCCSTTTGGGCCGGGE
T ss_pred             CcEECcCCCCCCCCCccccHHHHHHHHHHhhCCCCCCCCC---CcCC---HHHHHHHHHHHHHhcCcccccCCCCCCCeE
Confidence            4588987764      245778888876665443445543   2232   356666678888887543110 0   0267


Q ss_pred             ecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhc
Q 009673          173 QPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF  250 (529)
Q Consensus       173 ~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~  250 (529)
                      .+++|+ +|+..++.++++|||+|++++|.|.++..        .+...|.  +++.++++++ ++.+|++++++.+.. 
T Consensus       105 ~it~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~--------~~~~~G~--~~~~v~~~~~~~~~~~~~~l~~~~~~-  173 (412)
T d1bw0a_         105 VLCSGGSHGILMAITAICDAGDYALVPQPGFPHYET--------VCKAYGI--GMHFYNCRPENDWEADLDEIRRLKDD-  173 (412)
T ss_dssp             EEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTC--EEEEEEEEGGGTTEECHHHHHHHCCT-
T ss_pred             EEecccccchhhhhhhhhccccceeeeeccchhhhh--------hhhccCc--cccccccccccccchhhHHHHhhhhc-
Confidence            778988 99999999999999999999998865531        3345565  6666666543 478999999998877 


Q ss_pred             CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC-------Cc--ccEEEecccccc
Q 009673          251 RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-------KY--CDVVTTTTHKSL  316 (529)
Q Consensus       251 ~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-------~~--aDiv~~S~hK~l  316 (529)
                      +++++++++|+||+  ..   ++++|.++|++++++||+|++ |.++.+.+..+.+.       +.  .-++++|++|++
T Consensus       174 ~~~~~~l~np~NPtG~~~~~~~~~~i~~~~~~~~~~vi~De~-Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~  252 (412)
T d1bw0a_         174 KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEI-YAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNL  252 (412)
T ss_dssp             TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECT-TTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTT
T ss_pred             cccccccccccccccccchhhhccccccccccCCeeeechhh-HHHhccCCCCCccccccccccccccccccccccCccC
Confidence            88999999999997  33   577888999999999999999 56666655433221       11  126778999975


Q ss_pred             --cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-c
Q 009673          317 --RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-L  393 (529)
Q Consensus       317 --~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~  393 (529)
                        +|+|.||+++++.......+........ . ...++.....+.++..+.........+..+++.++++.+.+.|.+ .
T Consensus       253 ~~~G~RvG~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~~  330 (412)
T d1bw0a_         253 VVPGWRLGWLLYVDPHGNGPSFLEGLKRVG-M-LVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECI  330 (412)
T ss_dssp             SCGGGCCEEEEEECTTCSCHHHHHHHHHHH-H-HHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTST
T ss_pred             ccCCCCcccccccchhhcchhhhhhhcccc-c-cccCCchhhhhhcccccccccccccccccchhHHHHHHHHHHHHHhc
Confidence              7999999999874211111211111110 0 011222222222222222111123467778888899999999977 5


Q ss_pred             CcEEecCCCCCceEEEccCCC----CCcHHH-HHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHH
Q 009673          394 GYKLVSGGSDNHLVLVDLRPM----GIDGAR-VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVA  468 (529)
Q Consensus       394 G~~v~~~gt~~~~~~v~~~~~----~i~~~~-~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~  468 (529)
                      |+.+..+ ..++++|+++...    ..+..+ +.++|+++||.+    +||.... .+++|||++.      .+++++++
T Consensus       331 g~~~~~p-~gg~~l~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v----~PG~~Fg-~~g~iRis~~------~~~e~l~e  398 (412)
T d1bw0a_         331 GLAPTMP-RGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQV----LPGTIFH-APGFTRLTTT------RPVEVYRE  398 (412)
T ss_dssp             TEEECCC-CBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEEC----EEGGGGT-CTTEEEEECC------SCHHHHHH
T ss_pred             CceecCC-CCceEEEEeCChhhcCCCCCHHHHHHHHHHhCCEEE----EeccccC-CCCeEEEEEc------CCHHHHHH
Confidence            8887654 2346666655321    123444 566778899998    4554311 3678999863      34788888


Q ss_pred             HHHHHHHHHHH
Q 009673          469 IADFIHEGVEI  479 (529)
Q Consensus       469 la~~i~~~~~~  479 (529)
                      ..+.|++.+++
T Consensus       399 al~Rl~~~l~~  409 (412)
T d1bw0a_         399 AVERIKAFCQR  409 (412)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            88888887764

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.93  E-value=8.2e-25  Score=224.56  Aligned_cols=329  Identities=17%  Similarity=0.172  Sum_probs=232.5

Q ss_pred             eEecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHH
Q 009673          106 ELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA  180 (529)
Q Consensus       106 ~L~asen~~----~~~V~eal~~~l~~~y~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A  180 (529)
                      ...+|++|+    .|.++++....+ .+|..|..++|...|+ +...++|    +++++++|.+.     -+.++||..|
T Consensus        48 ~~FsSndYLGL~~~p~v~~a~~~al-~~yG~gs~~Sr~~~G~~~~h~~LE----~~lA~~~g~e~-----all~~sG~~A  117 (396)
T d2bwna1          48 TVWCGNDYLGMGQHPVVLAAMHEAL-EAVGAGSGGTRNISGTTAYHRRLE----AEIAGLHQKEA-----ALVFSSAYNA  117 (396)
T ss_dssp             EECSCSCTTSGGGCHHHHHHHHHHH-HHHCSCCCSBTTTBCCBHHHHHHH----HHHHHHTTCSE-----EEEESCHHHH
T ss_pred             EEEEcccccCcCCCHHHHHHHHHHH-HHhCCCccccccccCCchHHHHHH----HHHHHHhCCCc-----eeeeecchHH
Confidence            335678885    789999998777 4688888888877765 5667888    78899999986     3567999999


Q ss_pred             HHHHHHhh--cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc---CCcEE
Q 009673          181 NFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLI  255 (529)
Q Consensus       181 ~~~~l~al--l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~---~pklI  255 (529)
                      |..++.++  ..+||.|+.....|.+...        .+..+++  +++.++      ..|.++++++++..   ++++|
T Consensus       118 n~~~i~~l~~~~~~d~i~~D~~~Hasi~~--------g~~ls~a--~~~~f~------Hnd~~~l~~l~~~~~~~~~~~i  181 (396)
T d2bwna1         118 NDATLSTLRVLFPGLIIYSDSLNHASMIE--------GIKRNAG--PKRIFR------HNDVAHLRELIAADDPAAPKLI  181 (396)
T ss_dssp             HHHHHHHHHHHSTTCEEEEETTCCHHHHH--------HHHHSCC--CEEEEC------TTCHHHHHHHHHHSCTTSCEEE
T ss_pred             HHHHHHHHhcccCCCceeehhhhhhccch--------hhhcccc--CceEee------cchHHHhhhHHhhhcccCceeE
Confidence            99999988  5789999888766543321        2334444  444444      34677776666532   34566


Q ss_pred             EEc--CCCCCCCCCHHHHHHHHHHhCCEEEEeccccccccccccc-----CCCCCcccEEEecccccccCCCCeEEEeeC
Q 009673          256 IAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-----ADPFKYCDVVTTTTHKSLRGPRGGMIFFKK  328 (529)
Q Consensus       256 i~~--~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-----~~~~~~aDiv~~S~hK~l~GprgG~i~~~~  328 (529)
                      ++.  +|..+...|+++|.+||++||+++++|+||+.|.+.....     .......|++++|++|+| |..||++++++
T Consensus       182 v~egvySmdGd~apl~~l~~L~~~y~~~L~vDeAHs~Gv~G~~G~G~~~~~~~~~~~di~~gTlsKa~-g~~Gg~v~~~~  260 (396)
T d2bwna1         182 AFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAY-GVFGGYIAASA  260 (396)
T ss_dssp             EEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTT-CSCCEEEEECH
T ss_pred             EEEeeccCcccccccHhHHHHhhhhcceeeeccceeeeeeccccccchhhcCCceeeeeeeecccccc-cccccccchhH
Confidence            665  5666668999999999999999999999999998754211     011124789999999998 67799999988


Q ss_pred             CCcchhHHHhhhcccccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673          329 DPVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV  407 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~  407 (529)
                            ++.+.+.....++. .+++....+++...+++.....+..+.+++...|.+++.+.|.+.|+.+..  ++++++
T Consensus       261 ------~~i~~l~~~~~~~ifStalpp~~~aa~~~al~i~~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~--~~spIv  332 (396)
T d2bwna1         261 ------RMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMPIID--HGSHIV  332 (396)
T ss_dssp             ------HHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHTCCBCC--CSSSCE
T ss_pred             ------HHHHHHHhhcchhhhcccCcHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhcCCCcCC--CCCCEE
Confidence                  67776654332222 233344555555567777666666777888889999999999999998764  346666


Q ss_pred             EEccCCCCCcHHHHH-HhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVE-KILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~-~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      .+.+.... ....+. ++|+++||.|.....|  ..|.+..++||+..+.    ++++|++++++.|+++
T Consensus       333 pv~ig~~~-~~~~~a~~lL~e~Gi~v~~i~~P--tVp~g~~rlRi~lsa~----ht~edId~l~~~L~~i  395 (396)
T d2bwna1         333 PVVIGDPV-HTKAVSDMLLSDYGVYVQPINFP--TVPRGTERLRFTPSPV----HDLKQIDGLVHAMDLL  395 (396)
T ss_dssp             EEECCCHH-HHHHHHHHHHHHHCEECCEECTT--TSCTTCCEEEECCCTT----SCHHHHHHHHHHHHHH
T ss_pred             EEEeCCHH-HHHHHHHHHHHhCCEEEEEECCC--cCCCCCeeEEEEeCcc----CCHHHHHHHHHHHHHh
Confidence            55453211 123344 4577899998664334  2244567899997764    5689999999999875

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=7.8e-25  Score=225.00  Aligned_cols=356  Identities=13%  Similarity=0.119  Sum_probs=237.3

Q ss_pred             cccCChHHHHHHHHHHHHhhcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673           83 LGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA  160 (529)
Q Consensus        83 l~~~d~~~~~~~~~e~~~~~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~  160 (529)
                      +..+...++..+.+. .+..+.|+|..+..  ++|+.+++++...+.+.. .+|+.   ..|   ..++.+...+++.+.
T Consensus         8 ~~~~~~~~~~~~~~~-a~~~~~i~l~~G~Pd~~~p~~i~~a~~~~~~~~~-~~Y~~---~~G---~~~LReaia~~~~~~   79 (382)
T d1u08a_           8 LPQLGTTIFTQMSAL-AQQHQAINLSQGFPDFDGPRYLQERLAHHVAQGA-NQYAP---MTG---VQALREAIAQKTERL   79 (382)
T ss_dssp             CCCCCCCHHHHHHHH-HHHTTCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CSCCC---TTC---CHHHHHHHHHHHHHH
T ss_pred             CCCCCCcHHHHHHHH-hccCCCEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CcC---CHHHHHHHHHHHHHH
Confidence            344444555544333 33457799988775  468899999988776532 34533   122   346666777899999


Q ss_pred             cCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCC
Q 009673          161 FNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD  239 (529)
Q Consensus       161 ~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD  239 (529)
                      +|.+.+.- .+|.+|+|+ +|+..++++++++||.|++++|.+..+..        .....|.  ..+.++++.+++.+|
T Consensus        80 ~g~~~~~~-~~I~vt~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d  148 (382)
T d1u08a_          80 YGYQPDAD-SDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAP--------AIALSGG--IVKRMALQPPHFRVD  148 (382)
T ss_dssp             HSCCCCTT-TTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECCTTTCCCC
T ss_pred             hCCCCCCC-ceEEeccchHHHHHHHHhhcccccceEEEecccccchhh--------hhhhccc--cceecccccccccCC
Confidence            99874210 246678888 89999999999999999999987754421        2334454  344444555668899


Q ss_pred             HHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC-C---cc--cEE
Q 009673          240 YDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K---YC--DVV  308 (529)
Q Consensus       240 ~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-~---~a--Div  308 (529)
                      ++++++.+.+ ++++|++++|+||+  ..   ++++|.++|++++++++.|+.+. .....+..+... .   ..  -++
T Consensus       149 ~~~l~~~~~~-~~~~i~l~~P~NPtG~v~~~~~~~~l~~~~~~~~~~ii~d~~~~-~~~~~~~~~~~~~~~~~~~~~~i~  226 (382)
T d1u08a_         149 WQEFAALLSE-RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYE-HINFSQQGHASVLAHPQLRERAVA  226 (382)
T ss_dssp             HHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTT-TCBCCSSCCCCGGGSHHHHTTEEE
T ss_pred             HHHHhhhhcc-CccEEEECCCCcccccccccccchhhhhhhccccceeeeecchh-hccccccccccccccccccCcEEE
Confidence            9999999988 89999999999997  33   45677788889999999998643 333332222111 1   12  288


Q ss_pred             Eecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 009673          309 TTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL  386 (529)
Q Consensus       309 ~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l  386 (529)
                      +.|++|++  +|+|.||+++++      ++.+.+.........+.+...+.+ ++.+++.- ...+...++.+.++++.+
T Consensus       227 ~~s~SK~~~~pG~RiG~~v~~~------~~~~~~~~~~~~~~~~~~~~~q~a-~~~~l~~~-~~~~~~~~~~~~~~~~~l  298 (382)
T d1u08a_         227 VSSFGKTYHMTGWKVGYCVAPA------PISAEIRKVHQYLTFSVNTPAQLA-LADMLRAE-PEHYLALPDFYRQKRDIL  298 (382)
T ss_dssp             EEEHHHHTTCGGGCCEEEECCH------HHHHHHHHHHHHHTSSCCHHHHHH-HHHHHHHC-THHHHTHHHHHHHHHHHH
T ss_pred             EeeccccccCCcccchhhhccc------hhHHHHHhhhcccccccccccccc-cccccccc-hHHHHHHHHHHHhhhhhh
Confidence            89999975  899999999987      566655433221123444454544 34456542 344577888888899999


Q ss_pred             HHHHHhcCcEEecCCCCCceEEEccCCC-CCcHHHH-HHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHH
Q 009673          387 ASRLVELGYKLVSGGSDNHLVLVDLRPM-GIDGARV-EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK  464 (529)
Q Consensus       387 ~~~L~~~G~~v~~~gt~~~~~~v~~~~~-~i~~~~~-~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~  464 (529)
                      .+.+...|+.+..+ ..++++|+++... ..+..++ .++|+++||.+.++...+. .+...+++||++.      .+++
T Consensus       299 ~~~~~~~g~~~~~p-~gg~~~~~~~~~~~~~d~~e~~~~ll~e~gV~v~PG~~F~~-~~~~~~~~Ris~~------~~~e  370 (382)
T d1u08a_         299 VNALNESRLEILPC-EGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCA-DPFPHKLIRLCFA------KKES  370 (382)
T ss_dssp             HHHTTSSSCEECCC-CBSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCS-SCCCSCEEEEECC------SCHH
T ss_pred             hhhhccCCcEEecC-CceEEEEEecCCCCCCCHHHHHHHHHHHCCEEEEcchhhCC-CCCCCCEEEEEEe------CCHH
Confidence            99888889988764 3457788888643 3566554 5566889999944322111 1234578999862      3478


Q ss_pred             HHHHHHHHHHH
Q 009673          465 EFVAIADFIHE  475 (529)
Q Consensus       465 d~~~la~~i~~  475 (529)
                      ++++..++|++
T Consensus       371 ~l~~al~RL~~  381 (382)
T d1u08a_         371 TLLAAAERLRQ  381 (382)
T ss_dssp             HHHHHHHHHTT
T ss_pred             HHHHHHHHHhC
Confidence            88887777654

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.93  E-value=2.4e-24  Score=218.80  Aligned_cols=333  Identities=16%  Similarity=0.056  Sum_probs=216.0

Q ss_pred             eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 009673          105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV  184 (529)
Q Consensus       105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~  184 (529)
                      +.++|++.++|+.|++||.....+++           +.++.+.++ .+++++++++|+++++. +.+..+|||.++.++
T Consensus         2 ~l~~pGP~~~~~~V~~A~~~~~~~~~-----------~~~~~~~~~-~~r~~l~~l~~~~~~~~-~i~~t~s~T~~~~~~   68 (361)
T d1m32a_           2 LLLTPGPLTTSRTVKEAMLFDSCTWD-----------DDYNIGVVE-QIRQQLTALATASEGYT-SVLLQGSGSYAVEAV   68 (361)
T ss_dssp             EECSSSSCCCCHHHHHTTCCCCCTTS-----------HHHHTTTHH-HHHHHHHHHHCSSSSEE-EEEEESCHHHHHHHH
T ss_pred             ccccCCCCCCCHHHHHHhhhhccCCC-----------cHHHHHHHH-HHHHHHHHHhCCCCCCE-EEEECCCHHHHHHHH
Confidence            45678888899999999864432221           112223333 57799999999987643 234456788999999


Q ss_pred             HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC-
Q 009673          185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP-  263 (529)
Q Consensus       185 l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p-  263 (529)
                      +.++..++|.+++....+.+.....      .....+.....+..+.+ .....+.+.....+.+ +++++.+...++. 
T Consensus        69 ~~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~t  140 (361)
T d1m32a_          69 LGSALGPQDKVLIVSNGAYGARMVE------MAGLMGIAHHAYDCGEV-ARPDVQAIDAILNADP-TISHIAMVHSETTT  140 (361)
T ss_dssp             HHHSCCTTCCEEEEESSHHHHHHHH------HHHHHTCCEEEEECCTT-SCCCHHHHHHHHHHCT-TCCEEEEESEETTT
T ss_pred             HHHhhhhccccceeeehhhhhhHHH------Hhhhhhccccccccccc-CCccchhhHHHHHhcc-CccceEEEeeeccc
Confidence            9999999998888764332211100      01111221222222111 1122333333444444 7888888754443 


Q ss_pred             -CCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhc
Q 009673          264 -RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN  341 (529)
Q Consensus       264 -~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~  341 (529)
                       ...|+++|.++|+++|+++++|++|+.|.+..+....   ++|++++|.|||+.||.| |+++.+++      ..+++.
T Consensus       141 G~~~~i~~i~~~~~~~g~~~~vDa~qs~G~~~~d~~~~---~~D~~~~s~~K~l~gp~G~g~l~~~~~------~~~~~~  211 (361)
T d1m32a_         141 GMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAAL---HIDYLISSANKCIQGVPGFAFVIAREQ------KLAACK  211 (361)
T ss_dssp             TEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTT---TCSEEEEESSSTTCCCSSEEEEEEEHH------HHTTCT
T ss_pred             ccchhhhhhhhhhcccceeeEeecccccCccccccccc---ccceEEeeecccccCCCCceEEEechh------hhhhhc
Confidence             3889999999999999999999999999875544333   589999999999999999 99999873      222221


Q ss_pred             cc-----------------ccCCCCCCChHHHHHHHHHHHHHhcCchH-HHHHHHHHHHHHHHHHHHHhcCcEEecCC-C
Q 009673          342 NA-----------------VFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVELGYKLVSGG-S  402 (529)
Q Consensus       342 ~~-----------------~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~~a~~l~~~L~~~G~~v~~~g-t  402 (529)
                      ..                 ......+++....+.++..++.....++. ....++....++.+.+.+...|+.+..+. .
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~  291 (361)
T d1m32a_         212 GHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDEL  291 (361)
T ss_dssp             TCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGG
T ss_pred             cccccccccchhhhccccccccccCCCCCchhhhHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHhhcCCcccCChhh
Confidence            11                 11122456777777777777765554443 45566777778888888888887765431 1


Q ss_pred             C-CceEEEccC-CCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          403 D-NHLVLVDLR-PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       403 ~-~~~~~v~~~-~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      . +..+.+.+. ..+.+..++.+.|.+.||.+..    |+.  ..++.+|||+..++    +++|++++++.|++++
T Consensus       292 rs~~v~~~~~p~~~~~~~~~~~~~l~~~gi~i~~----G~~--~~~~~~Ris~~g~~----~~~di~~lv~al~~~L  358 (361)
T d1m32a_         292 HSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYP----GKV--SQSDCFRIGNIGEV----YAADITALLTAIRTAM  358 (361)
T ss_dssp             BCSSEEEEECCCCTTCCHHHHHHHHHHTTEECEE----CCC--SSSCEEEEECCSSC----CHHHHHHHHHHHHHHC
T ss_pred             cCCcEEEEECCCCCCCCHHHHHHHHHHCCcEEEC----CCc--CCCCEEEEeCCCCC----CHHHHHHHHHHHHHHc
Confidence            1 223333332 2345678899999999999843    322  23568999964343    4799999999999875

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=99.92  E-value=2.9e-24  Score=224.33  Aligned_cols=302  Identities=16%  Similarity=0.123  Sum_probs=198.0

Q ss_pred             HHHHHHHHHHHHHHcCCCCC-CCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccc-cccce
Q 009673          147 DELETLCQKRALAAFNLDEN-KWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIY  223 (529)
Q Consensus       147 d~lE~~a~~~la~~~g~~~~-~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~-~~g~~  223 (529)
                      .++.+.+.+++.+.+|.... +. .+|.+|+|+ +|+..++.++++|||+|++++|.|+++..        .+. ..|  
T Consensus        87 ~~LR~aiA~~l~~~~~~~~~~~p-e~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~~~~--------~~~~~~g--  155 (431)
T d1m7ya_          87 PAFKKAMVDFMAEIRGNKVTFDP-NHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDR--------DLKWRTG--  155 (431)
T ss_dssp             HHHHHHHHHHHHHHTTTSSCCCG-GGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HTTTTTC--
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCc-ceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHhcC--
Confidence            46666667888888873311 01 267778987 99999999999999999999998765432        122 234  


Q ss_pred             EEEEEcccCCC-CCCCCHHHHHHHhhh-----cCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccc
Q 009673          224 FESMPYRLDES-TGLVDYDMLEKTAIL-----FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGL  292 (529)
Q Consensus       224 ~~~v~~~v~~~-~~~iD~d~le~~i~~-----~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gl  292 (529)
                      .++++++++++ ++.+|++.+++.+.+     .+++++++++|+||+  ..   ++++|.++|++||++||+|++| ..+
T Consensus       156 ~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~nP~NPtG~~~s~~~l~~i~~~a~~~~~~vI~De~Y-~~~  234 (431)
T d1m7ya_         156 VEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIY-SGT  234 (431)
T ss_dssp             CEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTT-GGG
T ss_pred             ceeccccccchhcccccHHHhhhhhhhhhhccCcceEEEecCccccccccccccccccccccccccCcceeecccc-ccc
Confidence            36777777654 368999999887753     246788888999997  33   5788899999999999999985 344


Q ss_pred             ccccccCCCC-------------Cc--ccEEEecccccc--cCCCCeEEEeeCCCcchhHHH-hhhcccccCCCCCCChH
Q 009673          293 VAASVVADPF-------------KY--CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELE-SAINNAVFPGLQGGPHN  354 (529)
Q Consensus       293 i~~~~~~~~~-------------~~--aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~-~~i~~~~~p~~~g~p~~  354 (529)
                      .+.+....++             ..  --+++.|++|.+  +|+|.||++.++      ++. ..........  +.+..
T Consensus       235 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~RiG~~~~~~------~~i~~~~~~~~~~~--~~~~~  306 (431)
T d1m7ya_         235 AFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSND------DMVVAAATKMSSFG--LVSSQ  306 (431)
T ss_dssp             CCSSSCCCCHHHHTTTTTCSSSSSGGGGEEEEEESSSSSCCGGGCEEEEEESC------HHHHHHHHHHGGGS--CCCHH
T ss_pred             ccCCCCCCCHHHHhhhcccccccccCceEEEEecCcccccCCCCccceeccch------hhhHHHHHHHhccc--ccccc
Confidence            4332111100             01  127889999986  789999999987      443 3222221111  12122


Q ss_pred             HHHHHHHHHHH--HhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCC----C-cH-HHHHHhHh
Q 009673          355 HTIGGLAVCLK--HAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMG----I-DG-ARVEKILD  426 (529)
Q Consensus       355 ~~iaala~al~--~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~----i-~~-~~~~~~L~  426 (529)
                       ...++++.+.  ........+.++++.++++.+.+.|++.|+++..+ ..+.++|++++..-    . +. +.+.++|+
T Consensus       307 -~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~~~~p-~gg~f~w~~l~~~~~~~~~~~~~~l~~~ll~  384 (431)
T d1m7ya_         307 -TQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNG-NAGLFCWVDMRHLLRSNTFEAEMELWKKIVY  384 (431)
T ss_dssp             -HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEECCC-CSSSEEEEECGGGSSSSSHHHHHHHHHHHHH
T ss_pred             -ccchhhhhhccchhhhhhhhhhhhhhhhhhhhhhhhhhcCCcEEecC-CceeEEEEECccccccCcccCHHHHHHHHHH
Confidence             2222222221  11112235666777888889999999999998765 34577888875311    1 12 23556678


Q ss_pred             cCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          427 MASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       427 ~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      ++||.+    .||.. ++..++++||++..     .+++++++..+.|++++++
T Consensus       385 ~~gV~v----~PG~~F~~~~~~~~Ri~~a~-----~~e~~l~~al~rL~~~l~~  429 (431)
T d1m7ya_         385 EVHLNI----SPGSSCHCTEPGWFRVCFAN-----LPERTLDLAMQRLKAFVGE  429 (431)
T ss_dssp             TSCEEC----EEGGGGTCSSTTEEEEECSS-----SCHHHHHHHHHHHHHHHHH
T ss_pred             HCCEEE----EeccccCCCCCCEEEEEeCc-----CCHHHHHHHHHHHHHHHHH
Confidence            899999    45543 23346889998632     3578899999998888764

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=99.92  E-value=2.1e-24  Score=225.20  Aligned_cols=342  Identities=14%  Similarity=0.122  Sum_probs=213.6

Q ss_pred             ceeEecCCCCCcH-HHHHHHhhhhhc-cCCCCCCC---CCCCCCchhHHHHHHHHHHHHHHHcCCC----CCCCceeeec
Q 009673          104 SLELIASENFTSR-AVMEAVGSCLTN-KYSEGLPG---KRYYGGNEYIDELETLCQKRALAAFNLD----ENKWGVNVQP  174 (529)
Q Consensus       104 ~i~L~asen~~~~-~V~eal~~~l~~-~y~~G~p~---~r~~~g~~~~d~lE~~a~~~la~~~g~~----~~~~~~~V~~  174 (529)
                      .|+|..+||.++. .+.+.+...... ...++...   ...|+...-..++++...+++.+.+|..    ++    +|.+
T Consensus        38 ~i~l~~aen~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~~~~e----~Ivi  113 (428)
T d1iaya_          38 VIQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPE----RVVM  113 (428)
T ss_dssp             BEECSSCCCCSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTT----SCEE
T ss_pred             eEEeecccCccchHHHHHHHHhCCchhhhHhHhhhCHHhccCcCCcchHHHHHHHHHHHHHHhCCCCCCChh----hEEE
Confidence            5899889997644 444434321110 01111100   0012222223466767778888888743    33    4666


Q ss_pred             CChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccc-cccceEEEEEcccCCC-CCCCCHHHHHHHhhh--
Q 009673          175 LSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDES-TGLVDYDMLEKTAIL--  249 (529)
Q Consensus       175 ~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~-~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~--  249 (529)
                      ++|+ +|+..++.++++|||+|++++|.|.++..        .+. ..|.  ++++++++.+ ++.+|+++++..++.  
T Consensus       114 t~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~--------~~~~~~g~--~~v~v~~~~~~~~~~d~~~~~~~~~~~~  183 (428)
T d1iaya_         114 AGGATGANETIIFCLADPGDAFLVPSPYYPAFNR--------DLRWRTGV--QLIPIHCESSNNFKITSKAVKEAYENAQ  183 (428)
T ss_dssp             EEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHH--------HTTTTTCC--EEEEECCCTTTTTCCCHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHhCCCCCEEEEccCCchHHHH--------HHHHhcCC--eEEEeecccccccccccccccchhhhhh
Confidence            8887 99999999999999999999998765532        122 2243  6777777644 478999988765431  


Q ss_pred             ---cCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC-----------Cc--ccEE
Q 009673          250 ---FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-----------KY--CDVV  308 (529)
Q Consensus       250 ---~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-----------~~--aDiv  308 (529)
                         .++++|+++.|+||+  ..   ++++|.++|++||++||+|++| ..+.+.+....++           ..  -.++
T Consensus       184 ~~~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~vI~De~Y-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~vi~  262 (428)
T d1iaya_         184 KSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIY-AATVFDTPQFVSIAEILDEQEMTYCNKDLVHI  262 (428)
T ss_dssp             HTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTT-GGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEE
T ss_pred             ccCCCceEEEEccCCCcccccccccccchhheeeccCcEEEEecccc-cccccCcccccccccccchhhccccccceEEE
Confidence               256788888999997  33   4788999999999999999995 4444433211111           01  1278


Q ss_pred             Eecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHH--HHhcCchHHHHHHHHHHHHH
Q 009673          309 TTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCL--KHAQSPEFKVYQNKVVSNCR  384 (529)
Q Consensus       309 ~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al--~~~~~~~~~~~~~~i~~~a~  384 (529)
                      +.|++|.+  +|+|.|++++.++     ++.+.++.......  .+...+ .++++.+  ........++..+.+.++++
T Consensus       263 ~~s~SK~~~~~GlRiG~~~~~~~-----~l~~~~~~~~~~~~--~~~~~~-~~~~a~l~~~~~~~~~~~~~~~~l~~r~~  334 (428)
T d1iaya_         263 VYSLSKDMGLPGFRVGIIYSFND-----DVVNCARKMSSFGL--VSTQTQ-YFLAAMLSDEKFVDNFLRESAMRLGKRHK  334 (428)
T ss_dssp             EEESTTTSSCGGGCEEEEEESCH-----HHHHHHHHHHTTSC--CCHHHH-HHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCcccCCCccccccccccc-----chhhhhhhhhcccc--cccccc-cchhhhhhhhccccccccccccccchhHH
Confidence            89999975  7899999998763     56555544322221  112222 2222221  11111223566677788888


Q ss_pred             HHHHHHHhcCcEEecCCCCCceEEEccCCC----CCcH-HH-HHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCc
Q 009673          385 ALASRLVELGYKLVSGGSDNHLVLVDLRPM----GIDG-AR-VEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMT  457 (529)
Q Consensus       385 ~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~----~i~~-~~-~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~t  457 (529)
                      .+.+.|+..|+++..+ ..++++|++++..    ..+. .+ +.++|+++||.+.    ||.. +...+++|||++..  
T Consensus       335 ~~~~~L~~~gi~~~~p-~gg~f~w~~l~~~~~~~~~~~~~~l~~~Ll~~~gV~v~----PG~~F~~~~~g~~Ris~a~--  407 (428)
T d1iaya_         335 HFTNGLEVVGIKCLKN-NAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVS----PGSSFECQEPGWFRVCFAN--  407 (428)
T ss_dssp             HHHHHHHHTTCCBCCC-SSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECE----EGGGGTCSSSSEEEEECSS--
T ss_pred             HHHHHHHhCCCEEecC-CcceEEEEECccccccCCCCCHHHHHHHHHHhCCEEEE----cchhcCCCCCCEEEEEeCC--
Confidence            9999998899987654 3467788887531    1112 22 4566688999994    4443 23357889998632  


Q ss_pred             cCCCCHHHHHHHHHHHHHHHH
Q 009673          458 TRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       458 t~g~~~~d~~~la~~i~~~~~  478 (529)
                         ..++++++..++|++++.
T Consensus       408 ---~~~~~l~~al~Rl~~~l~  425 (428)
T d1iaya_         408 ---MDDGTVDIALARIRRFVG  425 (428)
T ss_dssp             ---SCHHHHHHHHHHHHHHHH
T ss_pred             ---CCHHHHHHHHHHHHHHHh
Confidence               346789998999888875

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.92  E-value=1.3e-24  Score=222.21  Aligned_cols=323  Identities=13%  Similarity=0.127  Sum_probs=217.5

Q ss_pred             CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-
Q 009673          110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-  188 (529)
Q Consensus       110 sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-  188 (529)
                      +.+.++++-++++...+.+.+         +...++++++|    +++++++|.+.     .|.++|||.|+.+++.++ 
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~---------~~~G~~v~~~E----~~la~~~g~~~-----ai~~~sgt~Al~~al~al~   67 (376)
T d1mdoa_           6 SRPAMGAEELAAVKTVLDSGW---------ITTGPKNQELE----AAFCRLTGNQY-----AVAVSSATAGMHIALMALG   67 (376)
T ss_dssp             CCCCCCHHHHHHHHHHHHHTC---------CSSSHHHHHHH----HHHHHHHCCSE-----EEEESCHHHHHHHHHHHTT
T ss_pred             CCCCCCHHHHHHHHHHHhcCC---------CcCCHHHHHHH----HHHHHHHCcCe-----EEEeCCHHHHHHHHHHHhC
Confidence            345567777788877776553         12235688888    78999999976     356799999999999999 


Q ss_pred             cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCH
Q 009673          189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDY  268 (529)
Q Consensus       189 l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~  268 (529)
                      ++|||+|++++.++.+...        .+...|.  +++.++++++++.+|+|+|++++++ +||+|++. +.++...|+
T Consensus        68 ~~~gdeVi~~~~~~~~~~~--------ai~~~g~--~pv~~d~~~~~~~~d~~~l~~~i~~-~tkaIi~~-h~~G~~~~~  135 (376)
T d1mdoa_          68 IGEGDEVITPSMTWVSTLN--------MIVLLGA--NPVMVDVDRDTLMVTPEHIEAAITP-QTKAIIPV-HYAGAPADL  135 (376)
T ss_dssp             CCTTCEEEEESSSCHHHHH--------HHHHTTC--EEEEECBCTTTCCBCHHHHHHHCCT-TEEEECCB-CGGGCCCCH
T ss_pred             CCCCCEEEEeccccccccc--------chhcccc--ceeeecccccccCCCHHHHHHhcCC-CCeEEEEe-CCCCCccch
Confidence            8999999999987755432        3445565  8889999988899999999999998 89988875 345557899


Q ss_pred             HHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcccccC--
Q 009673          269 PRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFP--  346 (529)
Q Consensus       269 ~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p--  346 (529)
                      ++|.++|+++|++||.|+||+.|....+.....+ +..++++..+|.++++.||+++++++     ++.+++......  
T Consensus       136 ~~i~~i~~~~~i~vIeD~a~a~g~~~~~~~~g~~-g~~~~Sf~~~K~l~~g~GG~i~t~~~-----~l~~~~~~~~~~g~  209 (376)
T d1mdoa_         136 DAIYALGERYGIPVIEDAAHATGTSYKGRHIGAR-GTAIFSFHAIKNITCAEGGIVVTDNP-----QFADKLRSLKFHGL  209 (376)
T ss_dssp             HHHHHHHHHHTCCBCEECTTCTTCEETTEETTSS-SEEEEECCTTSSSCSSSCEEEEESCH-----HHHHHHHHHTBTTE
T ss_pred             hHHHHHHHhcCceEEeccchhccCeeCCeecccc-cCccccCCCcCCCCCCCCCEEEEech-----hHHHHHHhhcccCC
Confidence            9999999999999999999999876554332222 23355556669998899999999885     454443221111  


Q ss_pred             ---------------------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec-CCC--
Q 009673          347 ---------------------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS-GGS--  402 (529)
Q Consensus       347 ---------------------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~-~gt--  402 (529)
                                           +.... .....+++  .+.++  ..+++..++..++++.+.+.|.+..+.... ...  
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~g~n~~-~~~~~Aai--~~~qL--~~~~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~  284 (376)
T d1mdoa_         210 GVDAWDRQSGGRAPQAEVLAPGYKYN-LPDLNAAI--ALAQL--QKLDALNARRAAIAAQYHQAMADLPFQPLSLPSWEH  284 (376)
T ss_dssp             ECC-----------CCEESSCCCBCC-CCHHHHHH--HHHHH--HTHHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCE
T ss_pred             cccccccccccccccccchhcccccc-cchhhhhh--hhhhh--hhhhHHHHHHhhhhhhhhhhcccccccccccccccc
Confidence                                 11111 11122222  22232  245677788888899999999885443322 111  


Q ss_pred             -CC-ceEEEcc--CCCCCcHHHHHHhHhcCCeEEcCCCCCCCCC----------C------CCCCeEEEccCCCccCCCC
Q 009673          403 -DN-HLVLVDL--RPMGIDGARVEKILDMASITLNKNSVPGDKS----------A------LVPGGIRIGSPAMTTRGFS  462 (529)
Q Consensus       403 -~~-~~~~v~~--~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~----------~------~~~~~iRig~~~~tt~g~~  462 (529)
                       .+ +.++..+  ...+.+.+++.+.|.+.||.++..+.|.+..          .      +....|.|.+.    .+++
T Consensus       285 ~~~~~~~~~~~~~~~~~~~Rd~l~~~L~~~gI~~~~~y~~~~~~~~~~~~~~~~~~p~a~~~~~~~i~LP~~----~~lt  360 (376)
T d1mdoa_         285 IHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLF----PDMT  360 (376)
T ss_dssp             ECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCC----TTCC
T ss_pred             cccccccccccccccchhhHHHHHHHHHHCCCCeeeECcchhcCHHHHhhCCCCCCHHHHHHHhCEEEccCC----CCCC
Confidence             11 1222212  1123355778899999999987554332110          0      01234666433    3578


Q ss_pred             HHHHHHHHHHHHHHH
Q 009673          463 EKEFVAIADFIHEGV  477 (529)
Q Consensus       463 ~~d~~~la~~i~~~~  477 (529)
                      ++|++++++.|++++
T Consensus       361 ~~ei~~I~~~i~~i~  375 (376)
T d1mdoa_         361 ESDFDRVITALHQIA  375 (376)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999998864

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.92  E-value=3.1e-23  Score=211.61  Aligned_cols=333  Identities=13%  Similarity=0.081  Sum_probs=224.0

Q ss_pred             ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673          104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE  183 (529)
Q Consensus       104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~  183 (529)
                      .+.+++++..+|+.|++||.....++           .+.++.+.++ .+++.+++++|++.+.  ..+...+||.++.+
T Consensus        19 ~~l~~PGP~~v~~~Vl~am~~~~~~h-----------r~~ef~~i~~-~~r~~l~~ll~~~~~~--~i~~~g~gT~~~~~   84 (377)
T d1vjoa_          19 RLLLGPGPSNAHPSVLQAMNVSPVGH-----------LDPAFLALMD-EIQSLLRYVWQTENPL--TIAVSGTGTAAMEA   84 (377)
T ss_dssp             CEECSSSCCCCCHHHHHHHSSCCCCT-----------TSHHHHHHHH-HHHHHHHHHHTCCCSC--EEEESSCHHHHHHH
T ss_pred             ceeecCCCCCCCHHHHHHhCcCCCCC-----------CCHHHHHHHH-HHHHHHHHHhCCCCCe--EEEEcCcHHHHHHH
Confidence            46778899999999999986432211           2346666665 5779999999997653  22445667899999


Q ss_pred             HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 009673          184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP  263 (529)
Q Consensus       184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p  263 (529)
                      ++..++.+||++++....+.+....      ......+.  ....+... .+...+.+..+......+++++.+...++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  155 (377)
T d1vjoa_          85 TIANAVEPGDVVLIGVAGYFGNRLV------DMAGRYGA--DVRTISKP-WGEVFSLEELRTALETHRPAILALVHAETS  155 (377)
T ss_dssp             HHHHHCCTTCEEEEEESSHHHHHHH------HHHHHTTC--EEEEEECC-TTCCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred             HHHhccccccccceeeechhhhhhh------hhhhhhcc--cccccccC-CCCcccchhhhhhhhcCcceeeeeeeeecc
Confidence            9999999999999887544332111      01112232  22222222 334566666666655558998888754333


Q ss_pred             --CCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh
Q 009673          264 --RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI  340 (529)
Q Consensus       264 --~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i  340 (529)
                        ...|+++|.++|+++|+++++|++|++|.+..+....   ++|++++|.||++.||.| |+++.++      +..+..
T Consensus       156 tg~~~~i~~i~~~~~~~g~~~~vDa~~~~g~~~~~~~~~---~~d~~~~s~~K~~~gp~g~~~~~~~~------~~~~~~  226 (377)
T d1vjoa_         156 TGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAW---GVDLAYSCSQKGLGCSPGASPFTMSS------RAIEKL  226 (377)
T ss_dssp             TTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTT---TCSEEECCSSSTTCSCSSCEEEEECH------HHHHHH
T ss_pred             ceeeechhhhhhhhhhccceEEEecchhhhhhhhccccc---ccceeeecccccccCCCEEEEecchh------hHHhhh
Confidence              3889999999999999999999999988764443222   589999999999999988 6666665      333221


Q ss_pred             ccc-------------------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC-
Q 009673          341 NNA-------------------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG-  400 (529)
Q Consensus       341 ~~~-------------------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~-  400 (529)
                      ...                   ......+++....+.++..++......+.+...++..++.+.+.+.|.+.|+.++.+ 
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  306 (377)
T d1vjoa_         227 QRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEK  306 (377)
T ss_dssp             HTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCG
T ss_pred             hccCCCCcceeeccchhhhccCcccccccccceechhhhHHHHhhhhhcCchHHHHHHHHHhhhhhhhhhccCceeecCh
Confidence            111                   111224556666666666666655555567788888888999999999888876643 


Q ss_pred             CC-CCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccC-CCccCCCCHHHHHHHHHHHHHHH
Q 009673          401 GS-DNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSP-AMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       401 gt-~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~-~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      .. .+..+.+.+ +.++++.++.+.| +++||.+..+.     .....+.||||+. +++    ++||+++++++|++++
T Consensus       307 ~~rs~~v~~~~~-p~~~~~~~l~~~L~~~~gI~v~~G~-----~~~~~~~~Ris~~g~~~----t~edi~~lv~al~~~l  376 (377)
T d1vjoa_         307 EYRLPTLTTVCI-PDGVDGKAVARRLLNEHNIEVGGGL-----GELAGKVWRVGLMGFNS----RKESVDQLIPALEQVL  376 (377)
T ss_dssp             GGBCSSEEEEEC-CTTCCHHHHHHHHHHHHCEECEECC-----GGGTTTEEEEECCGGGC----SHHHHHHHHHHHHHHH
T ss_pred             HhcCCeEEEEEC-CCCCCHHHHHHHHHhcCCEEEecCc-----ccccCCEEEEecCcCCC----CHHHHHHHHHHHHHHh
Confidence            11 122333444 4577888887665 77899986532     1233567999963 344    4799999999999886


Q ss_pred             H
Q 009673          478 E  478 (529)
Q Consensus       478 ~  478 (529)
                      +
T Consensus       377 ~  377 (377)
T d1vjoa_         377 R  377 (377)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=99.91  E-value=1.1e-23  Score=217.73  Aligned_cols=346  Identities=14%  Similarity=0.025  Sum_probs=211.9

Q ss_pred             hhcceeEecCCC----CCcHHHHHHHhhhhhccC--CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeec
Q 009673          101 QFKSLELIASEN----FTSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP  174 (529)
Q Consensus       101 ~~~~i~L~asen----~~~~~V~eal~~~l~~~y--~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~  174 (529)
                      .++.|+|..+..    ++.+.+.+++...+.+.-  ..+|+.      .....++++...+++.+.+|.+.+.  .+|.+
T Consensus        28 ~~~~i~l~~G~P~~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~------~~G~~~lR~aia~~l~~~~g~~~~~--~~I~i   99 (403)
T d1wsta1          28 TSDVISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQYGT------TKGFTPLRLALARWMEKRYDIPMSK--VEIMT   99 (403)
T ss_dssp             SSSCEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCC------SSCCHHHHHHHHHHHHHHHCCCCTT--CEEEE
T ss_pred             CCCcEECCCCCCCccccCHHHHHHHHHHHHHhCcccccCCCC------CcCCHHHHHHHHHHHHHHhCCCCCh--HHeee
Confidence            357788876532    233466666666553210  012332      2223466667778888888876432  36777


Q ss_pred             CChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCC-CCCHHH-HHHHhhhc-
Q 009673          175 LSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG-LVDYDM-LEKTAILF-  250 (529)
Q Consensus       175 ~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~-~iD~d~-le~~i~~~-  250 (529)
                      |+|+ +++..++.++++|||+|++++|.|..+..        .+...|.  +.+.++.+.+.. ..+... .++..... 
T Consensus       100 t~G~~~al~~~~~~l~~~gd~v~~~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~  169 (403)
T d1wsta1         100 VAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQ--------AFKYYDP--EFISIPLDDKGMRVDLLEEKLEELRKQGK  169 (403)
T ss_dssp             ESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTCC--EEEEEEEETTEECHHHHHHHHHHHHHTTC
T ss_pred             cccchHHHHHHHHHHhhcCCccccCCCcchhhhH--------HHhhccc--cceeEeecccCCccccccccchhhhhccc
Confidence            8888 99999999999999999999998765432        2334454  555555553221 111111 12222221 


Q ss_pred             -CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-----cccEEEecccccc-cC
Q 009673          251 -RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-----YCDVVTTTTHKSL-RG  318 (529)
Q Consensus       251 -~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-----~aDiv~~S~hK~l-~G  318 (529)
                       .+.+++++.++||+  ..   ++++|.++|++||++||+|++| ..+.+.+....++.     ...++++|++|++ +|
T Consensus       170 ~~~~~~~~~~p~NPtG~~~s~~~l~~i~~~a~~~~~~li~De~y-~~l~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G  248 (403)
T d1wsta1         170 RVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPY-SELRYSGEPTPPIKHFDDYGRVIYLGTFSKILAPG  248 (403)
T ss_dssp             CCCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTT-TTCBCSSCCCCCGGGGCSSSCEEEEEESTTTTCGG
T ss_pred             cccccccccccCCCCCccCCHHHHHHHHHHHHhcCceeccccch-hheecCCCCCCcccccCCCCcEEEEccccceecCc
Confidence             23455566888987  33   4678888999999999999984 45554443322322     2348889999987 68


Q ss_pred             CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHHHh---cC
Q 009673          319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA-QSPEFKVYQNKVVSNCRALASRLVE---LG  394 (529)
Q Consensus       319 prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~-~~~~~~~~~~~i~~~a~~l~~~L~~---~G  394 (529)
                      +|.||+++++      ++.+.+.........+.+...+.+ .+..+... .....++..+.+..+++.+.+.|.+   .|
T Consensus       249 ~RiG~~i~~~------~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~  321 (403)
T d1wsta1         249 FRIGWVAAHP------HLIRKMEIAKQSIDLCTNTFGQAI-AWKYVENGYLDEHIPKIIEFYKPRRDAMLEALEEYMPEG  321 (403)
T ss_dssp             GCCEEEEECH------HHHHHHHHHHHHHHSSCCHHHHHH-HHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTT
T ss_pred             ccccccccch------HHHHHHHHHHhhhccccccchhhh-HHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence            9999999987      566554432111112222222222 22122211 1112356667777888888888877   36


Q ss_pred             cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673          395 YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH  474 (529)
Q Consensus       395 ~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~  474 (529)
                      +....+ ..+.++|+++. .+++.+.+.+.|.+.||.+.++...+. ....++++||++..     .+++++++.++.|+
T Consensus       322 ~~~~~p-~gg~~~~~~~~-~~~~~~~~~~~l~~~gV~v~pg~~f~~-~~~~~~~iRi~~~~-----~~~~~l~~al~rl~  393 (403)
T d1wsta1         322 VEWTKP-EGGMFVRVTLP-EGIDTKLMMERAVAKGVAYVPGEAFFV-HRDKKNTMRLNFTY-----VPEETIREGVRRLA  393 (403)
T ss_dssp             CEECCC-SBSSEEEEECC-TTCCTTTTHHHHHHTTEECEEGGGGST-TCCCCSEEEEECSS-----SCHHHHHHHHHHHH
T ss_pred             eEEeCC-CceeEEEEECC-CCCCHHHHHHHHHHCCEEEEechhhcC-CCCCCCEEEEEecC-----CCHHHHHHHHHHHH
Confidence            666544 33567788884 467777788888899999843321111 12246789998632     45799999999999


Q ss_pred             HHHHHH
Q 009673          475 EGVEIT  480 (529)
Q Consensus       475 ~~~~~~  480 (529)
                      ++++..
T Consensus       394 ~~l~~~  399 (403)
T d1wsta1         394 ETIKEE  399 (403)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888743

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=1.2e-23  Score=217.18  Aligned_cols=328  Identities=19%  Similarity=0.217  Sum_probs=225.5

Q ss_pred             cCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673          109 ASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE  183 (529)
Q Consensus       109 asen~~----~~~V~eal~~~l~~~y~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~  183 (529)
                      +|.+|+    .|.|+++....+ ++|..|..+.|...|+ +...++|    +.+++++|.+.     -+.++||+.||..
T Consensus        51 ~s~dYLGl~~hp~v~~a~~~a~-~~~g~~~~~sr~~~g~~~~~~~lE----~~lA~~~g~e~-----al~~~SG~~An~~  120 (401)
T d1fc4a_          51 CANNYLGLANHPDLIAAAKAGM-DSHGFGMASVRFICGTQDSHKELE----QKLAAFLGMED-----AILYSSCFDANGG  120 (401)
T ss_dssp             CCSCTTSCTTCHHHHHHHHHHH-HHHCSCCCSCHHHHCCBHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHT
T ss_pred             EccccccccCCHHHHHHHHHHH-HHhCCCcccceeeccCcHHHHHHH----HHHHHhhcCCc-----eEEecchhhhhHH
Confidence            566764    699999998776 5677777777765544 4555666    67889999986     3557999999999


Q ss_pred             HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCcEEEEc
Q 009673          184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAG  258 (529)
Q Consensus       184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-----~pklIi~~  258 (529)
                      ++.++.+++|.|+.....|.+++.        .+...+.  +...++      ..|++++++++...     +..+|++.
T Consensus       121 ~i~~l~~~~d~i~~d~~~h~s~~~--------G~~~~~a--~~~~~~------~~d~~~le~~~~~~~~~~~~~~liv~e  184 (401)
T d1fc4a_         121 LFETLLGAEDAIISDALNHASIID--------GVRLCKA--KRYRYA------NNDMQELEARLKEAREAGARHVLIATD  184 (401)
T ss_dssp             THHHHCCTTCEEEEETTCCHHHHH--------HHHTSCS--EEEEEC------TTCHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred             HHHHhcCCCcEEEeCCcchHHHHc--------cccccCc--eEEEEc------CCChHHHHHHHHHhhhcccCceEEEEc
Confidence            999999999999988877655431        2223333  333333      34666766655432     22455554


Q ss_pred             --CCCCCCCCCHHHHHHHHHHhCCEEEEeccccccccccccc-----CCCCCcccEEEecccccccCCCCeEEEeeCCCc
Q 009673          259 --ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-----ADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPV  331 (529)
Q Consensus       259 --~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-----~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~  331 (529)
                        ++..+...|+++|.+||++||+++++|++|..|.+.....     ....+..|++++|++|.++|+.||++.+++   
T Consensus       185 gv~s~~G~~~~L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~~~~~~~~~~~dii~~tl~Ka~gg~~Gg~v~g~~---  261 (401)
T d1fc4a_         185 GVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARK---  261 (401)
T ss_dssp             SEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSCEEEEECH---
T ss_pred             CCCCCCCchhhhhHHHHHHhhcCcEEEehhhhccccccCCCCccchhccCCCCCeEEEeecccccccCCcccccCCH---
Confidence              3444557899999999999999999999999887654211     111235799999999999899999999988   


Q ss_pred             chhHHHhhhcccccCCCCC-CChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEc
Q 009673          332 LGVELESAINNAVFPGLQG-GPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVD  410 (529)
Q Consensus       332 ~~~~l~~~i~~~~~p~~~g-~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~  410 (529)
                         ++.+.+.....+...+ ++.....++...+++....  .++.++++.++.+++.+.+.+.|+.+..  ++++++.+.
T Consensus       262 ---~~~~~l~~~~~~~~~s~~l~p~~~~aa~~~l~~~~~--~~~~~~~l~~~~~~~~~~l~~~g~~~~~--~~~pIv~v~  334 (401)
T d1fc4a_         262 ---EVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEA--GSELRDRLWANARQFREQMSAAGFTLAG--ADHAIIPVM  334 (401)
T ss_dssp             ---HHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHTTCCBCC--SSSSEEEEE
T ss_pred             ---HHHHHHHcCChhhhhcCCCCHHHHHHHHhhhccccc--CHHHHHHHHHHHHHHHhhhcccCCccCC--CCCCEEEEE
Confidence               6777665332222222 2233334444445655432  3677899999999999999999887654  345555444


Q ss_pred             cCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          411 LRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       411 ~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +... .....+.+.|.++||.++....|-  -|.+..+|||.+++.    +|++|++++++.|+++.+.
T Consensus       335 ~~~~-~~a~~~~~~L~~~Gi~v~~i~~Pt--Vp~g~~~lRi~~~a~----hT~edId~~v~al~ev~~~  396 (401)
T d1fc4a_         335 LGDA-VVAQKFARELQKEGIYVTGFFYPV--VPKGQARIRTQMSAA----HTPEQITRAVEAFTRIGKQ  396 (401)
T ss_dssp             EECH-HHHHHHHHHHHHTTEECCEECTTS--SCTTCEEEEEECCTT----CCHHHHHHHHHHHHHHHHH
T ss_pred             ECCH-HHHHHHHHHHHHCCceEEeECCCC--CCCCCceEEEEECCC----CCHHHHHHHHHHHHHHHHH
Confidence            4321 123457788889999986543332  234567799987653    6699999999999998764

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=99.91  E-value=1.2e-23  Score=216.32  Aligned_cols=337  Identities=18%  Similarity=0.160  Sum_probs=217.7

Q ss_pred             hcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673          102 FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-  178 (529)
Q Consensus       102 ~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-  178 (529)
                      .+.|+|..+++  ++|+.+++++.....  ...+|+.      ..-..++.+.+.+++.+.+|.+.+.  .+|.+|+|+ 
T Consensus        28 ~~vi~l~~G~p~~~~p~~~~~al~~~~~--~~~~Y~~------~~G~~~LR~aia~~~~~~~g~~~~~--~~I~it~G~~   97 (389)
T d2gb3a1          28 VRIHHLNIGQPDLKTPEVFFERIYENKP--EVVYYSH------SAGIWELREAFASYYKRRQRVDVKP--ENVLVTNGGS   97 (389)
T ss_dssp             CEEEECSSCCCCSCCCTHHHHHHHHTCC--SSCCCCC------TTCCHHHHHHHHHHHHHTSCCCCCG--GGEEEESHHH
T ss_pred             CCEEECCCCCCCCCCCHHHHHHHHhcCC--CCCCCCC------CcCCHHHHHHHHHHHHHhcCCCccc--ceEEeccccc
Confidence            36689988875  368889999876432  1233433      2223466666778888888886432  367789988 


Q ss_pred             HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673          179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      +++..++.++++|||.|++++|.+.....        .....|.  ..+.++.+.+.+..+.+.+...+.+ ++++++++
T Consensus        98 ~~l~~~~~~l~~~gd~V~i~~P~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~  166 (389)
T d2gb3a1          98 EAILFSFAVIANPGDEILVLEPFYANYNA--------FAKIAGV--KLIPVTRRMEEGFAIPQNLESFINE-RTKGIVLS  166 (389)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHHTC--EEEEEECCGGGTSCCCTTGGGGCCT-TEEEEEEE
T ss_pred             ccccccccccccCCCeEEEeCCCCccccc--------cccccCc--cccccccccccccchhhhhhhhccc-CccEEEeC
Confidence            89999999999999999999997654321        2233444  5555555544455565666666666 78999999


Q ss_pred             CCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC---cccEEEecccccc--cCCCCeEEEeeC
Q 009673          259 ASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSL--RGPRGGMIFFKK  328 (529)
Q Consensus       259 ~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~---~aDiv~~S~hK~l--~GprgG~i~~~~  328 (529)
                      +|+||+  ..   ++++|.++|++||+++|.|+++ ..+...+..+....   ...+++.|++|.+  +|+|.||+++++
T Consensus       167 nP~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y-~~~~~~~~~~~~~~~~~~~~~v~~s~sK~~~~~GlRiG~~~~~~  245 (389)
T d2gb3a1         167 NPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVY-SEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRN  245 (389)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTT-TTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSC
T ss_pred             CCCccccccchHHHHHHHHhhcccCCEEEEEeccc-cccccccccccccccccccccccccccccccCcccceeeeeccc
Confidence            999997  23   5788999999999999999984 55555443222221   2347778998875  789999999987


Q ss_pred             CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEE
Q 009673          329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL  408 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~  408 (529)
                      +     .+........... .+.......++ ...+.. ....++...+.+.++++.+.+.|++.|+.........+++|
T Consensus       246 ~-----~i~~~~~~~~~~~-~~~~~~~~~~~-~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~~g~~~~  317 (389)
T d2gb3a1         246 E-----ELISHAMKLAQGR-LAPPLLEQIGS-VGLLNL-DDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYIT  317 (389)
T ss_dssp             H-----HHHHHHHHHHHHS-CCCCHHHHHHH-HHHHTC-CHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBSSEEE
T ss_pred             h-----hHHHHHhhhhhcc-ccccccccccc-cccccc-cchhcccccccccccchhhhhhhhhhccccccCCCceEEEE
Confidence            3     3443332221111 12222223222 222321 11234677788889999999999998765443334467788


Q ss_pred             EccCCCCCcHHHH-HHhHhc-----CCeEEcCCCCCCCC----CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          409 VDLRPMGIDGARV-EKILDM-----ASITLNKNSVPGDK----SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       409 v~~~~~~i~~~~~-~~~L~~-----~GI~v~~~~~Pg~~----~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +++...  ++.++ .++|++     .||.+    .||..    +...++++||++.      .+++++++.++.|.++++
T Consensus       318 ~~lp~~--~~~~~~~~ll~e~~l~~~~v~v----~pg~~f~~~~~~~~~~iRis~~------~~~~~l~~a~~~L~~~lk  385 (389)
T d2gb3a1         318 AELPVE--DAEEFARWMLTDFNMDGETTMV----APLRGFYLTPGLGKKEIRIACV------LEKDLLSRAIDVLMEGLK  385 (389)
T ss_dssp             EECSSS--CHHHHHHHHHHSCCBTTEEEEC----EEGGGGCSSTTTTSSEEEEECC------SCHHHHHHHHHHHHHHHH
T ss_pred             EeCCCC--CHHHHHHHHHHhhhhhhCCEEE----EeCcccccCCCCCCCEEEEEEc------CCHHHHHHHHHHHHHHHH
Confidence            887532  55554 444554     35665    33332    1223578999852      357888888888888776


Q ss_pred             HH
Q 009673          479 IT  480 (529)
Q Consensus       479 ~~  480 (529)
                      ..
T Consensus       386 ~f  387 (389)
T d2gb3a1         386 MF  387 (389)
T ss_dssp             HH
T ss_pred             Hh
Confidence            43

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=4.6e-23  Score=211.68  Aligned_cols=327  Identities=14%  Similarity=0.141  Sum_probs=229.0

Q ss_pred             ecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673          108 IASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF  182 (529)
Q Consensus       108 ~asen~~----~~~V~eal~~~l~~~y~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~  182 (529)
                      .+|.+|+    .|.|+++....+ .+|..|..++|...|. +...++|    +.+++++|.+.     -+..+||+.||.
T Consensus        43 f~s~dYLGl~~~p~v~~a~~~a~-~~~G~~~~~sr~~~g~~~~~~~lE----~~LA~~~g~e~-----al~~~SG~~an~  112 (383)
T d1bs0a_          43 FSSNDYLGLSHHPQIIRAWQQGA-EQFGIGSGGSGHVSGYSVVHQALE----EELAEWLGYSR-----ALLFISGFAANQ  112 (383)
T ss_dssp             CSCCCTTSGGGCHHHHHHHHHHH-HHHCSCCCSBTTTTCCCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHH
T ss_pred             EEcccccccCCCHHHHHHHHHHH-HHhCCCCCccccccCcchHHHHHH----HHHHHhcCCCc-----eEEecccchhhH
Confidence            4566764    789999988776 5688888888876654 5667777    67899999885     356799999999


Q ss_pred             HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcC--CcEEEEc--
Q 009673          183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR--PKLIIAG--  258 (529)
Q Consensus       183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~--pklIi~~--  258 (529)
                      .++.++..++|.|+.....|.+...        .+...+.  ..+.++      ..|++++++.+....  .++|++.  
T Consensus       113 ~~i~al~~~~d~v~~d~~~h~si~~--------g~~~~~~--~~~~~~------hnd~~~le~~l~~~~~~~~~vv~e~v  176 (383)
T d1bs0a_         113 AVIAAMMAKEDRIAADRLSHASLLE--------AASLSPS--QLRRFA------HNDVTHLARLLASPCPGQQMVVTEGV  176 (383)
T ss_dssp             HHHHHHCCTTCEEEEETTCCHHHHH--------HHHTSSS--EEEEEC------TTCHHHHHHHHHSCCSSCEEEEEESB
T ss_pred             HHHHhhcCCCceEEeeccccHHHhh--------ccccCCC--cceEec------chHHHHHHHHhcccCCCceEEEecCC
Confidence            9999999999999988776544321        2233443  444544      468899988886543  3456555  


Q ss_pred             CCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEecccccccCCCCeEEEeeCCCcchhH
Q 009673          259 ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVE  335 (529)
Q Consensus       259 ~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~  335 (529)
                      ++..+...|+++|.++|++||+++++|++|..|........  .... ..|+++.|+.|.+ |..||++.++.      +
T Consensus       177 ~s~~G~i~pl~~l~~l~~~~~~~livDeah~~gv~G~~g~G~~~~~~~~~~~~~~t~~ka~-g~~Gg~v~~~~------~  249 (383)
T d1bs0a_         177 FSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGF-GVSGAAVLCSS------T  249 (383)
T ss_dssp             CTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTT-SSCCEEEEECH------H
T ss_pred             CCCCCcccchhHHHHHHHhcCcEEEeecceeeeecCCcccchHHHcCCccccccccccccc-cccccccccch------h
Confidence            44556689999999999999999999999999877543111  0011 3568888999987 66789998887      6


Q ss_pred             HHhhhcccccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCC
Q 009673          336 LESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM  414 (529)
Q Consensus       336 l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~  414 (529)
                      +.+.++...-+.. ..+.+...++++..+++.....+.+...++..++..++.+.|.+.|+.+...  +++++.+.+...
T Consensus       250 ~~~~l~~~~~~~~~s~~~~p~~~aa~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~~~~~~--~s~Ii~v~~g~~  327 (383)
T d1bs0a_         250 VADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADS--CSAIQPLIVGDN  327 (383)
T ss_dssp             HHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSCEECSC--CSSBCCEEEESH
T ss_pred             HHHHHHhhchhhhhcccccchHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcCCccCCC--CCCEEEEEECCH
Confidence            6666653322222 2233344555555567666555667788888999999999999999987653  345443333211


Q ss_pred             CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          415 GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       415 ~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                       .....+.+.|.++||.++....|  ..|.+...|||++++.    ++++|++++++.|+.+
T Consensus       328 -~~a~~~~~~L~~~Gi~v~~~~~P--tVp~g~~~lRi~~~a~----ht~edid~l~~~L~~~  382 (383)
T d1bs0a_         328 -SRALQLAEKLRQQGCWVTAIRPP--TVPAGTARLRLTLTAA----HEMQDIDRLLEVLHGN  382 (383)
T ss_dssp             -HHHHHHHHHHHHTTEECCEECTT--SSCTTCEEECCBCCTT----CCHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHCCceEEEEcCC--CCCCCCceEEEEeCCC----CCHHHHHHHHHHHHhc
Confidence             12346778888999998654333  2234467899988764    5699999999998764

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=2.4e-23  Score=213.26  Aligned_cols=332  Identities=16%  Similarity=0.104  Sum_probs=220.5

Q ss_pred             eEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHH
Q 009673          106 ELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEV  184 (529)
Q Consensus       106 ~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs~A~~~~  184 (529)
                      .|+|++.++|++|++||....        .+.|   +.++.+.++ .+++.++++++.. .+++.+.+...|||+++.++
T Consensus         6 l~~PGP~~v~~~V~~Am~~~~--------~~hr---~~~f~~~~~-~~~~~~r~~~~~~~~~~~~~i~~t~sgT~a~~~~   73 (382)
T d2bkwa1           6 LLIPGPIILSGAVQKALDVPS--------LGHT---SPEFVSIFQ-RVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIF   73 (382)
T ss_dssp             ECSSSSCCCCHHHHHTTSCCC--------CCTT---SHHHHHHHH-HHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHH
T ss_pred             ccCCCCCCCCHHHHHHhCccc--------CCCC---cHHHHHHHH-HHHHHHHHHHhhhcCCCCeEEEEeCcHHHHHHHH
Confidence            367888889999999985322        1212   234444443 4567888888752 22222445567788999999


Q ss_pred             HHhhc---CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 009673          185 YTAIL---KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA  261 (529)
Q Consensus       185 l~all---~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~  261 (529)
                      +.+++   +|||+|++....+.++   .+.   ......+.  ....+...+....++.+.+++.+...+++++++...+
T Consensus        74 ~~~l~~~~~~gd~vlv~~~~~~~~---~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  145 (382)
T d2bkwa1          74 ASNFILSKAPNKNVLVVSTGTFSD---RFA---DCLRSYGA--QVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVD  145 (382)
T ss_dssp             HHHHSCTTCSCCEEEEECSSHHHH---HHH---HHHHHTTC--EEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEE
T ss_pred             HHHHHHhcCCCCceEEEEechhhh---hhh---hhcccccc--ccccccccCCCCccchhHHHHHhhhccchheeeeecc
Confidence            99986   6899999987543322   111   01122333  2222223334457889999988887789988887443


Q ss_pred             --CCCCCCHHHHHHHHHHhC--CEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHH
Q 009673          262 --YPRDFDYPRMRQIADAVG--ALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL  336 (529)
Q Consensus       262 --~p~~~d~~~i~~ia~~~g--~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l  336 (529)
                        ++...|++++.++|++++  +++++|++|++|.++.+....   ++|++++|.||||.||.| |+++++++      +
T Consensus       146 ~~tg~~~~~~~~~~~~~~~~~~~~~~vDa~qs~g~~pid~~~~---giD~~~~s~~K~l~gP~G~g~l~vs~~------~  216 (382)
T d2bkwa1         146 TSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEW---GVDFALTASQKAIGAPAGLSISLCSSR------F  216 (382)
T ss_dssp             TTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTT---TCSEEEEESSSTTCCCSCEEEEEECHH------H
T ss_pred             ccccccccchhhhhhccccccceeeeeeccccccccccccccc---CeeEEeecccccCcCCCchhhhhccHH------H
Confidence              444789999999988875  999999999998775443322   689999999999999999 99999873      2


Q ss_pred             Hhhhcc-------------------------cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Q 009673          337 ESAINN-------------------------AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLV  391 (529)
Q Consensus       337 ~~~i~~-------------------------~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~  391 (529)
                      .+++..                         .......++|+...++++..||+.+...+.....++..+.++++.+.+.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~aL~~~~~~g~~~~~~~~~~l~~~l~~~l~  296 (382)
T d2bkwa1         217 MDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLV  296 (382)
T ss_dssp             HHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhhhhcccCCCcccchhhhhhhhhhhhcccccccccccCCcHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhh
Confidence            222110                         0111235689999999999999988766777777777788888888887


Q ss_pred             h-cCcEEecC---CCCCc-eEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHH
Q 009673          392 E-LGYKLVSG---GSDNH-LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEF  466 (529)
Q Consensus       392 ~-~G~~v~~~---gt~~~-~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~  466 (529)
                      + .++..+..   ...++ +..+.+.    ++.++.++|+++||.+..+.    ......+.+|||+..+++   +++|+
T Consensus       297 ~~~~~~~~~~~~~~~~s~~v~~~~~~----~~~~~~~~L~~~gi~i~~G~----~~~~~~~~~Ri~~~G~~~---~~e~i  365 (382)
T d2bkwa1         297 NGLQLTSVSRYPSNMSAHGLTAVYVA----DPPDVIAFLKSHGVVIAGGI----HKDIGPKYIRIGHMGVTA---CNKNL  365 (382)
T ss_dssp             TTTCCEESSCSSSTTBCSSCEEEECS----CHHHHHHHHHHTTEECBCCC----CTTTGGGEEEECCCGGGT---SSTTC
T ss_pred             hcccccccccCchhccCCcEEEEcCC----CHHHHHHHHHHCCeEEECCC----ChhhcCCEEEEeCCcCCC---CHHHH
Confidence            6 45555432   11122 2223332    57789999999999986432    112345679999643332   25778


Q ss_pred             HHHHHHHHHHH
Q 009673          467 VAIADFIHEGV  477 (529)
Q Consensus       467 ~~la~~i~~~~  477 (529)
                      +++.++|..+.
T Consensus       366 ~~l~~~l~~i~  376 (382)
T d2bkwa1         366 PYMKNCFDLIK  376 (382)
T ss_dssp             THHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            88888776543

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=2.5e-22  Score=203.42  Aligned_cols=326  Identities=15%  Similarity=0.093  Sum_probs=219.7

Q ss_pred             eEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHH
Q 009673          106 ELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY  185 (529)
Q Consensus       106 ~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l  185 (529)
                      .++|++..+++.|++||.....++        |   +.++.+.++ .+++.++++++.+++   +.+...|||.++.+++
T Consensus         3 L~~PGP~~v~~~V~~am~~~~~~h--------r---~~~f~~i~~-~~~~~l~~ll~~~~~---~i~~~gsgT~a~e~~~   67 (348)
T d1iuga_           3 LLTPGPVRLHPKALEALARPQLHH--------R---TEAAREVFL-KARGLLREAFRTEGE---VLILTGSGTLAMEALV   67 (348)
T ss_dssp             ECSSSSCCCCHHHHHHHHSCCCCT--------T---SHHHHHHHH-HHHHHHHHHHTCSSE---EEEEESCHHHHHHHHH
T ss_pred             ccCCCCCCCCHHHHHHhcCCCCCC--------C---CHHHHHHHH-HHHHHHHHHhCCCCC---EEEEeCchHHHHHHHH
Confidence            478888889999999997543221        1   234444444 578999999998764   4566788889999999


Q ss_pred             HhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC--CC
Q 009673          186 TAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA--YP  263 (529)
Q Consensus       186 ~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~--~p  263 (529)
                      ..+++|||+|++...   |+++..+.   ......+..++...++   ....+++++    +...+++.+++.+..  ++
T Consensus        68 ~nl~~~g~~vlv~~~---G~f~~~~~---~~a~~~~~~~~~~~~~---~g~~~~~~~----~~~~~~~~v~~~h~eTstG  134 (348)
T d1iuga_          68 KNLFAPGERVLVPVY---GKFSERFY---EIALEAGLVVERLDYP---YGDTPRPED----VAKEGYAGLLLVHSETSTG  134 (348)
T ss_dssp             HHHCCTTCEEEEEEC---SHHHHHHH---HHHHHTTCEEEEEECC---TTCCCCTTT----SCCSSCSEEEEESEETTTT
T ss_pred             Hhcccccccceeecc---hHHHHHHH---HHHHhcCccccccccc---CCCcccccc----ccccCCCeeEEEecchhhh
Confidence            999999999998864   33322211   1122234433433332   223344333    223378888877543  44


Q ss_pred             CCCCHHHHHHHHHHhC--CEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh
Q 009673          264 RDFDYPRMRQIADAVG--ALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI  340 (529)
Q Consensus       264 ~~~d~~~i~~ia~~~g--~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i  340 (529)
                      ...|+++|.++|++++  +++++|+++++|....+...+   ++|++++|.||+|.||.| |+++.+++      ..+++
T Consensus       135 ~~~~i~~i~~~~~~~~~~~l~~vDavss~g~~~i~~d~~---~iD~~~~~sqK~l~gppG~~~v~~s~~------~le~~  205 (348)
T d1iuga_         135 ALADLPALARAFKEKNPEGLVGADMVTSLLVGEVALEAM---GVDAAASGSQKGLMCPPGLGFVALSPR------ALERL  205 (348)
T ss_dssp             EECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCCSGGG---TCSEEEEESSSTTCCCSCEEEEEECHH------HHHTC
T ss_pred             hhccHHHHHHHHHhhhccceeechhhhcccccccccccc---cCCEEEeccccceecCCceeeeeechH------HHhhh
Confidence            4889999999999985  789999988877654332222   589999999999999999 99999873      33322


Q ss_pred             cc-------------cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673          341 NN-------------AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV  407 (529)
Q Consensus       341 ~~-------------~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~  407 (529)
                      ..             ........||+.+.+.++..+|+++.. ++.++.++.......+...+...|+.+......+.+.
T Consensus       206 ~~~~~~~dl~~~~~~~~~~~~~~Tp~v~~i~~l~~aL~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~s~~v~  284 (348)
T d1iuga_         206 KPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLP-RLEEHLALKAWQNALLYGVGEEGGLRPVPKRFSPAVA  284 (348)
T ss_dssp             CCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGG-GHHHHHHHHHHHHHHHHHHHHHTTCEESCSSBCTTCE
T ss_pred             cccccccchhhhhhhhccCcccccccchHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHhhhhhhhhhccChhhcCCeEE
Confidence            11             111123458999999999999988764 3455554444445555566666899887543222223


Q ss_pred             EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      .+.+ +.+++..++.+.|+++||.+..+.     +++....+|||+...    .+++|++.+.+.|+++++.
T Consensus       285 ~~~~-P~g~~~~~~~~~l~~~gi~i~~G~-----~~l~~~~~RIg~mG~----~~~~d~~~~~~~l~~~l~~  346 (348)
T d1iuga_         285 AFYL-PEGVPYARVKEAFAQRGAVIAGGQ-----GPLKGKVFRLSLMGA----YDRYEALGVAGMFREVLEE  346 (348)
T ss_dssp             EEEC-CTTCCHHHHHHHHHTTTEECEECC-----GGGTTTEEEECCCSS----CCHHHHHHHHHHHHHHHHH
T ss_pred             EEEC-CCCCCHHHHHHHHHHCCeEEEcCc-----cccCCCEEEEeCCCC----CCHHHHHHHHHHHHHHHHH
Confidence            3333 567888999999999999985432     233445799997543    4589999999999998864

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=99.91  E-value=1.1e-23  Score=219.07  Aligned_cols=344  Identities=16%  Similarity=0.063  Sum_probs=218.7

Q ss_pred             hcceeEecCCC----CCcHHHHHHHhhhhhccC--CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecC
Q 009673          102 FKSLELIASEN----FTSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL  175 (529)
Q Consensus       102 ~~~i~L~asen----~~~~~V~eal~~~l~~~y--~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~  175 (529)
                      ++.|+|..+..    ++.+.+.+++...+....  ..+|+.   ..|   ..++.+...+++.+.+|.+.... .+|.+|
T Consensus        38 ~~~I~l~~G~Pd~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~LR~aia~~~~~~~g~~~~~~-~~I~it  110 (420)
T d1vp4a_          38 KDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYST---TEG---DPVLKQQILKLLERMYGITGLDE-DNLIFT  110 (420)
T ss_dssp             TTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCC---TTC---CHHHHHHHHHHHHHHHCCCSCCG-GGEEEE
T ss_pred             CCcEecCCcCCCCccCCHHHHHHHHHHHHhhCCccccCCCC---CcC---CHHHHHHHHHHHHHHhCCCCCCH-HHeEec
Confidence            47789987652    234555666655553221  113332   112   34566666788888888762111 367789


Q ss_pred             ChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh-----
Q 009673          176 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-----  249 (529)
Q Consensus       176 sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~-----  249 (529)
                      +|+ +|+..++.++++|||+|++++|.|..+..        .+...|.  +++.++.++  ..+|++.++..+.+     
T Consensus       111 ~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~~~~~~--~~~~~~~l~~~~~~~~~~~  178 (420)
T d1vp4a_         111 VGSQQALDLIGKLFLDDESYCVLDDPAYLGAIN--------AFRQYLA--NFVVVPLED--DGMDLNVLERKLSEFDKNG  178 (420)
T ss_dssp             EHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTTC--EEEEEEEET--TEECHHHHHHHHHHHHHTT
T ss_pred             cchhhhHHHHHHhhhccccccccccccccchhH--------HHHHHhh--hcccccccc--cccccchhhhhhhhhHHHh
Confidence            998 99999999999999999999987754421        2334565  555655653  35788777654432     


Q ss_pred             --cCCc-EEEEcCCCCCC--C---CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-----cccEEEecccccc
Q 009673          250 --FRPK-LIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-----YCDVVTTTTHKSL  316 (529)
Q Consensus       250 --~~pk-lIi~~~s~~p~--~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-----~aDiv~~S~hK~l  316 (529)
                        .+++ +++++.++||+  .   .++++|.++|++|++++|+|++ |..+.+.+....+..     ..-++.+|++|++
T Consensus       179 ~~~~~~~~~~~~~p~NPtG~~~s~~~~~~i~~~a~~~~i~ii~De~-y~~l~~~~~~~~~~~~~~~~~~~i~~~s~sk~~  257 (420)
T d1vp4a_         179 KIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDP-YGALRYEGETVDPIFKIGGPERVVLLNTFSKVL  257 (420)
T ss_dssp             CGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECS-STTCBCSSCCCCCHHHHHCTTTEEEEEESTTTT
T ss_pred             hccccceeeEecCCCCccchhhhhhhhhhhhhhhhcccccccccch-hhhccccCcccccccccccccceeEEecccccc
Confidence              1233 45567888987  2   3578999999999999999998 555555443222221     2336778888975


Q ss_pred             -cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHHHHh--
Q 009673          317 -RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS-PEFKVYQNKVVSNCRALASRLVE--  392 (529)
Q Consensus       317 -~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~-~~~~~~~~~i~~~a~~l~~~L~~--  392 (529)
                       +|+|.||+++++      ++.+++.+.......+++...+.++ +..+..... ...++..+.+.++++.+.+.|.+  
T Consensus       258 ~~G~RiG~~~~~~------~~i~~l~~~~~~~~~~~~~~~q~~~-a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~  330 (420)
T d1vp4a_         258 APGLRIGMVAGSK------EFIRKIVQAKQSADLCSPAITHRLA-ARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYF  330 (420)
T ss_dssp             CGGGCEEEEECCH------HHHHHHHHHHHHHHSSCCHHHHHHH-HHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             ccccccccccccc------hhhhhhhhhhhhccccCchhhhhhh-hhhcccccccccchhHHHHhhhhcccchhhhhhhh
Confidence             899999999987      6777665433222233444433332 223332111 12245566677777777777766  


Q ss_pred             ---cCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHH
Q 009673          393 ---LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI  469 (529)
Q Consensus       393 ---~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~l  469 (529)
                         .|+++..+ ..+.++|++++ .+++..++.++|+++||.+.++...+. .....++|||++..     .+++++++.
T Consensus       331 ~~~~g~~~~~p-~gg~f~~~~~~-~~~d~~~~~~~l~~~gV~v~PG~~F~~-~~~~~~~iRls~~~-----~~~e~l~~a  402 (420)
T d1vp4a_         331 SDIPGVKWVKS-EGGLFIWLTLP-EGFDTWEMFEYAKRKKVFYVPGRVFKV-YDEPSPSMRLSFCL-----PPDEKIVEG  402 (420)
T ss_dssp             TTSTTCEECCC-SBSSEEEEECC-TTCCTTTTHHHHHHHTEECEEGGGGCT-TCCCCSEEEEECSS-----SCHHHHHHH
T ss_pred             ccCCCcEEecC-CceEEEEEECC-CCCCHHHHHHHHHHCCeEEEechhhCC-CCCCCCEEEEEeCc-----CCHHHHHHH
Confidence               27777654 34567888885 466777788889999999844321111 11235789998632     457889999


Q ss_pred             HHHHHHHHHHH
Q 009673          470 ADFIHEGVEIT  480 (529)
Q Consensus       470 a~~i~~~~~~~  480 (529)
                      .+.|+++++..
T Consensus       403 ~~rL~~~l~~~  413 (420)
T d1vp4a_         403 IKRLREVVLEY  413 (420)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99998888755

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.90  E-value=1.7e-22  Score=207.04  Aligned_cols=334  Identities=13%  Similarity=0.065  Sum_probs=222.4

Q ss_pred             ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673          104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE  183 (529)
Q Consensus       104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~  183 (529)
                      .+.+++++..++++|++||.....++        |   +.++.+.++ .+++.+++++|++..+  +.+...|||.++.+
T Consensus        18 ~~l~~PGP~~~~~~V~~Am~~~~~~h--------r---~~ef~~i~~-~~r~~L~~ll~~~~~~--~i~~~gsgT~a~ea   83 (388)
T d2ch1a1          18 KIMMGPGPSNCSKRVLTAMTNTVLSN--------F---HAELFRTMD-EVKDGLRYIFQTENRA--TMCVSGSAHAGMEA   83 (388)
T ss_dssp             CBCCSSSSCCCCHHHHHHTTSCCCCT--------T---CHHHHHHHH-HHHHHHHHHHTCCCSC--EEEESSCHHHHHHH
T ss_pred             ceeeeCCCCCCCHHHHHHhCcCCCCC--------C---CHHHHHHHH-HHHHHHHHHhCCCCCe--EEEEcCcHHHHHHH
Confidence            36688888889999999986443221        2   345566555 6789999999997542  33445677899999


Q ss_pred             HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC-
Q 009673          184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-  262 (529)
Q Consensus       184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~-  262 (529)
                      ++.+++.+||+|++....+.++   .+..   .....+.  ..+.+... +....+.+.+++.+...+++++.+.+.++ 
T Consensus        84 ~~~~l~~~~~~vl~~~~g~~~~---~~~~---~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~t~  154 (388)
T d2ch1a1          84 MLSNLLEEGDRVLIAVNGIWAE---RAVE---MSERYGA--DVRTIEGP-PDRPFSLETLARAIELHQPKCLFLTHGDSS  154 (388)
T ss_dssp             HHHHHCCTTCEEEEEESSHHHH---HHHH---HHHHTTC--EEEEEECC-TTSCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred             HHHHhccccccccccccccccc---cchh---hhhhhcc--cccccccc-cccccchhhhhhhhccCCcceeeeeecccc
Confidence            9999999999999887543322   1110   1122233  23333332 34567888888887777899998874433 


Q ss_pred             -CCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh
Q 009673          263 -PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI  340 (529)
Q Consensus       263 -p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i  340 (529)
                       +...|+++|.++|+++|+++++|++++.|....+....   ++|++++|.||++.||.| |+++.+++      ..+..
T Consensus       155 tG~~~~~~~i~~~~~~~~~~~~vD~~ss~g~~pid~~~~---~~d~~~~s~~K~~~gp~G~g~~~~~~~------~~~~~  225 (388)
T d2ch1a1         155 SGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKW---EIDAVYTGAQKVLGAPPGITPISISPK------ALDVI  225 (388)
T ss_dssp             TTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTT---TCCEEECCCC-CCCCCSSCEEEEECHH------HHHHH
T ss_pred             cccccchhhhcchhccccceeeeeeeecccccccchhcc---CceEEEEccccccCCCCeEEEEeccHH------HHHhh
Confidence             33789999999999999999999999988765443322   589999999999999999 88888763      22111


Q ss_pred             c----------------------ccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEe
Q 009673          341 N----------------------NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV  398 (529)
Q Consensus       341 ~----------------------~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~  398 (529)
                      .                      ....+...+++....+.++..+++.+...+.....++.......+...+...++...
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (388)
T d2ch1a1         226 RNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLDIF  305 (388)
T ss_dssp             HTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBS
T ss_pred             hcccCccccccccchhhhhhhcccccccccCccchHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhcccccc
Confidence            0                      001122345777888888877777665445555555555556666666666555544


Q ss_pred             cCC--C-CCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEcc-CCCccCCCCHHHHHHHHHHH
Q 009673          399 SGG--S-DNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGS-PAMTTRGFSEKEFVAIADFI  473 (529)
Q Consensus       399 ~~g--t-~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~-~~~tt~g~~~~d~~~la~~i  473 (529)
                      ...  . .+....+.+ +.+++..++.+.| +++||.+..+.     +....+.||||+ ..++    ++||++++.++|
T Consensus       306 ~~~~~~rs~~v~~~~~-p~g~~~~~l~~~l~~~~gI~v~~G~-----~~~~~~~~RIs~~g~~~----t~edI~~ll~al  375 (388)
T d2ch1a1         306 VKDPRHRLPTVTGIMI-PKGVDWWKVSQYAMNNFSLEVQGGL-----GPTFGKAWRVGIMGECS----TVQKIQFYLYGF  375 (388)
T ss_dssp             SCSGGGBCTTEEEEEC-CTTCCHHHHHHHHHHHHCBCCBCCC-----GGGTTTEEEEECCGGGC----SHHHHHHHHHHH
T ss_pred             cCCHHHhCCeEEEEEC-CCCCCHHHHHHHHhhcCCEEEeCCC-----ccccCCEEEEcCCcCCC----CHHHHHHHHHHH
Confidence            321  1 122333444 3578888877666 66799885432     123346799995 3444    379999999999


Q ss_pred             HHHHHH
Q 009673          474 HEGVEI  479 (529)
Q Consensus       474 ~~~~~~  479 (529)
                      +++++.
T Consensus       376 ke~L~~  381 (388)
T d2ch1a1         376 KESLKA  381 (388)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            999874

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.90  E-value=1.6e-23  Score=219.71  Aligned_cols=316  Identities=17%  Similarity=0.155  Sum_probs=212.3

Q ss_pred             CCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccc
Q 009673          135 PGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPK  214 (529)
Q Consensus       135 p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~  214 (529)
                      .|...|+|++.+.++|    +.++++||.++     -+.++||+.||.+++.++++|||+|+.....+. +..       
T Consensus        66 ~GDd~Y~~dpt~~~lE----~~~a~l~G~e~-----al~~~SGt~An~~a~~~l~~~Gd~Vi~~~~f~~-~~~-------  128 (456)
T d1c7ga_          66 IGDEAYAGSENFYHLE----KTVKELFGFKH-----IVPTHQGRGAENLLSQLAIKPGQYVAGNMYFTT-TRF-------  128 (456)
T ss_dssp             SCCCCSSSCHHHHHHH----HHHHHHHCCSE-----EEEESSHHHHHHHHHHHHCCTTEEEEESSCCHH-HHH-------
T ss_pred             ccchhccCCchHHHHH----HHHHHHhCCCe-----EEECCCHHHHHHHHHHHhcCCCCeEecCcchHH-HHH-------
Confidence            4556789999999999    67889999997     266799999999999999999999996543111 000       


Q ss_pred             cccccccceEEEEEccc---------CCCCCCCCHHHHHHHhhhcC---CcEEEEcCCCCCC---CC---CHHHHHHHHH
Q 009673          215 RRVSGTSIYFESMPYRL---------DESTGLVDYDMLEKTAILFR---PKLIIAGASAYPR---DF---DYPRMRQIAD  276 (529)
Q Consensus       215 ~~i~~~g~~~~~v~~~v---------~~~~~~iD~d~le~~i~~~~---pklIi~~~s~~p~---~~---d~~~i~~ia~  276 (529)
                       .+...|.  .++.+..         ++.++.+|+++|++.|++..   +.++++..++|+.   ..   ++++|.++|+
T Consensus       129 -~i~~~g~--~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~I~~~~~~~~~~i~~e~~~n~~gG~~~~~~~l~~i~~~a~  205 (456)
T d1c7ga_         129 -HQEKNGA--TFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMAS  205 (456)
T ss_dssp             -HHHHTTE--EEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHH
T ss_pred             -HHHHcCc--eeeeccccccccccccCCccccCCHHHHHHHhhhcCCccceeEEeeecccccccceecHHHHHHHHHHHH
Confidence             1122232  3332221         22357899999999998643   3467776665542   33   5788899999


Q ss_pred             HhCCEEEEecccccccccc------cccCC--------CCCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcc
Q 009673          277 AVGALLMMDMAHISGLVAA------SVVAD--------PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINN  342 (529)
Q Consensus       277 ~~g~~livD~ah~~Gli~~------~~~~~--------~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~  342 (529)
                      +||++++.|++|..|....      +....        .+.++|++++|+||.++++.||+++++++     ++.++++.
T Consensus       206 ~~~~~~~~D~a~~~~~a~~~~~~~~~~~~~~i~~i~~~~~~~ad~~s~s~~K~~~~~~GG~i~~~~~-----~l~~~~r~  280 (456)
T d1c7ga_         206 TYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDE-----EMFSAAKE  280 (456)
T ss_dssp             HHTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCSSCEEEEESCH-----HHHHHHHH
T ss_pred             HcCCEEEEEcchhhcchhhhcccccccCCCChhhhccccccccccEEEeccccccccceeEEEcCCH-----HHHHHHHH
Confidence            9999999999987664211      11111        12368999999999999999999999874     56555432


Q ss_pred             c----ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccC------
Q 009673          343 A----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLR------  412 (529)
Q Consensus       343 ~----~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~------  412 (529)
                      .    .....+|+.....+.+++..+.+...   .++.++..+++++|.+.|.+.|+.++.+ ...|...+|..      
T Consensus       281 ~~~~~~g~~~~g~~~~~~~~a~a~~l~e~~~---~~~l~~r~~~~~~L~e~L~~~g~~vv~p-~g~~~v~vda~~~~~~i  356 (456)
T d1c7ga_         281 LVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ---YEYIEHRVKQVRYLGDKLREAGVPIVEP-TGGHAVFLDARRFCPHL  356 (456)
T ss_dssp             HHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHTTCCBCSS-CCSSEEEEEHHHHCTTS
T ss_pred             hccccCCCcccchhhHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHhccCCcccC-CCCcceeEechhhccCC
Confidence            1    11223566667777777777777654   3566777888999999999999988765 34566666531      


Q ss_pred             -CCCCcHH-HHHHhHhcCCeEEcCCCC------CCC--CCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHH
Q 009673          413 -PMGIDGA-RVEKILDMASITLNKNSV------PGD--KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLE  482 (529)
Q Consensus       413 -~~~i~~~-~~~~~L~~~GI~v~~~~~------Pg~--~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~  482 (529)
                       .....+. .+.+++.+.||.+.....      |-.  ........+|+++|.   +.+|+++|+++++.|+++.++...
T Consensus       357 ~~~~~~~~~~~~~l~~~~GIr~~~~g~~~~~~~~~~g~~~~~~~e~vRLaip~---~~~T~e~iD~Vae~i~~v~~~~~~  433 (456)
T d1c7ga_         357 TQDQFPAQSLAASIYMETGVRSMERGIVSAGRSKETGENHRPKLETVRLTIPR---RVYTYAHMDVVADGIIKLYQHKED  433 (456)
T ss_dssp             CGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCSSSCCBCCCSCCEEEEECCT---TSCCHHHHHHHHHHHHHHHTTGGG
T ss_pred             CcccccHHHHHHHHHHHhCeeecccCccccccCCcccCccCCccceEEEecCc---ccCCHHHHHHHHHHHHHHHhhhhh
Confidence             1111222 355666788997532111      111  011123569999874   336899999999999998876533

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=1.4e-22  Score=205.85  Aligned_cols=277  Identities=14%  Similarity=0.104  Sum_probs=184.3

Q ss_pred             HHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCC-EEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673          154 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL  231 (529)
Q Consensus       154 ~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD-~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v  231 (529)
                      ++.+++++|++++    +|.+++|+ +++..++.++++||| .|++++|.|..+.        ......|.  +++.++.
T Consensus        62 r~~ia~~~gv~pe----~I~it~Gs~eai~~~~~~~~~pgd~~Vl~~~P~y~~~~--------~~~~~~g~--~v~~~~~  127 (354)
T d1fg7a_          62 IENYAQYAGVKPE----QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYS--------VSAETIGV--ECRTVPT  127 (354)
T ss_dssp             HHHHHHHHTSCGG----GEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHH--------HHHHHHTC--EEEECCC
T ss_pred             HHHHHHHhCCChH----HeeeccCchHHHHHHHHHhhccccccccccccccccch--------hhhhccCc--eeecccc
Confidence            4778899999986    56779998 999999999999999 5787888665432        12344554  6667766


Q ss_pred             CCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHH---HHHHHHHhCCEEEEecccccccccccccCCCCC--c
Q 009673          232 DESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPR---MRQIADAVGALLMMDMAHISGLVAASVVADPFK--Y  304 (529)
Q Consensus       232 ~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~---i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~  304 (529)
                      + +++.+|++++++.+.  ++++|++++|+||+  ..+-++   +.+.+ +++.++++|++++ .+......+....  .
T Consensus       128 ~-~~~~~d~~~l~~~~~--~~~~v~~~~pnNPtG~~~~~~~~~~~~~~~-~~~~~~iidd~~~-~f~~~~~~~~~~~~~~  202 (354)
T d1fg7a_         128 L-DNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQDFRTLLELT-RGKAIVVADEAYI-EFCPQASLAGWLAEYP  202 (354)
T ss_dssp             C-TTSCCCHHHHHTSCT--TEEEEEEESSCTTTCCCCCHHHHHHHHHHH-TTTCEEEEECTTG-GGSGGGCSGGGTTTCT
T ss_pred             c-cccccchhhhhhccc--ccceeeccCCCccceeEeeecccccccccc-cccccccccccch-hhccccccchhhcccc
Confidence            5 578999999988763  68999999999987  444443   33333 3577888888755 3332221111111  2


Q ss_pred             ccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 009673          305 CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN  382 (529)
Q Consensus       305 aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~  382 (529)
                      ..+++.|+||++  +|+|.||+++++      ++.+.+.+...+...++  ..+.++. .++.......+....+++.++
T Consensus       203 ~~iv~~S~SK~~~laGlRiGy~i~~~------~~i~~l~~~~~~~~~~~--~~~~~a~-~~~~~~~~~~~~~~~~~~~~~  273 (354)
T d1fg7a_         203 HLAILRTLSKAFALAGLRCGFTLANE------EVINLLMKVIAPYPLST--PVADIAA-QALSPQGIVAMRERVAQIIAE  273 (354)
T ss_dssp             TEEEEEESSSTTCCGGGCCEEEEECH------HHHHHHHHHSCSSCSCH--HHHHHHH-HHTSHHHHHHHHHHHHHHHHH
T ss_pred             cceEEeCCccccCCCccccccccccc------hhhhhhhhhcCccchhh--HHHHHHH-HHHhhhccccccccchhhhhH
Confidence            237789999985  899999999988      77777766544432222  2122221 222111112235566778888


Q ss_pred             HHHHHHHHHhcCc-EEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCC
Q 009673          383 CRALASRLVELGY-KLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF  461 (529)
Q Consensus       383 a~~l~~~L~~~G~-~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~  461 (529)
                      ++.+.+.|.+.+. ..+.+ +.++++|+++.    +++++.+.|.++||.|..    ++..+..++++||++.       
T Consensus       274 r~~l~~~l~~~~~~~~~~p-~~~~f~~~~~~----~~~~~~~~L~~~gIlvr~----~~~~~~~~~~lRisig-------  337 (354)
T d1fg7a_         274 REYLIAALKEIPCVEQVFD-SETNYILARFK----ASSAVFKSLWDQGIILRD----QNKQPSLSGCLRITVG-------  337 (354)
T ss_dssp             HHHHHHHHHHSTTEEEECC-CSSSEEEEEET----THHHHHHHHHHTTEECEE----CTTSTTCTTEEEEECC-------
T ss_pred             HHHHHHHHHhCCCcceeCC-CCceEEEEeCC----CHHHHHHHHHHCCcEEec----CCCCCCCCCEEEEEeC-------
Confidence            8999999988654 33333 34567888774    467788888899999854    3222234689999852       


Q ss_pred             CHHHHHHHHHHHH
Q 009673          462 SEKEFVAIADFIH  474 (529)
Q Consensus       462 ~~~d~~~la~~i~  474 (529)
                      +++|++++.++|+
T Consensus       338 t~ee~~~~l~aLk  350 (354)
T d1fg7a_         338 TREESQRVIDALR  350 (354)
T ss_dssp             CHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHh
Confidence            3789988888775

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=99.89  E-value=6.6e-23  Score=211.79  Aligned_cols=346  Identities=16%  Similarity=0.187  Sum_probs=212.1

Q ss_pred             HHHHHHHHHHHh-hcceeEecC----CC---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc
Q 009673           90 VCEIITKEKERQ-FKSLELIAS----EN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF  161 (529)
Q Consensus        90 ~~~~~~~e~~~~-~~~i~L~as----en---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~  161 (529)
                      ++.++++-++.. .+.|+|..+    ++   ++.+.|++|+...+.+..+.+|..      ..-..++.+.+.+++.+..
T Consensus        15 i~~~~~~~~~d~~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~   88 (401)
T d7aata_          15 ILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLP------IAGLADFTRASAELALGEN   88 (401)
T ss_dssp             HHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCC------TTCCHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHhCCCCCCcEEccCCCCcCCCCCCCCCHHHHHHHHHHhhCCCCCCCCC------CCCCHHHHHHHHHHHhccC
Confidence            455554432211 246999876    33   456899999887765554445543      2223466666667777666


Q ss_pred             CCC--CCCCceeeec--CChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CC
Q 009673          162 NLD--ENKWGVNVQP--LSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-ST  235 (529)
Q Consensus       162 g~~--~~~~~~~V~~--~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~  235 (529)
                      +..  .+.+ +.++.  ++|. .++..++.++++|||+|++++|.|.++..        .+...|.  +++++++.. ++
T Consensus        89 ~~~~~~~~i-~~~~~~~~~g~~~~~~~~~~~l~~pGd~Vlv~~P~y~~y~~--------~~~~~g~--~~~~~~~~~~~~  157 (401)
T d7aata_          89 SEAFKSGRY-VTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTP--------IFRDAGL--QLQAYRYYDPKT  157 (401)
T ss_dssp             CHHHHTTCE-EEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECEETTT
T ss_pred             CcccCcCce-EEeccchHHHHHHHHHHhhHhhcCCCceEEEecCCCcchhh--------HHHHcCC--eEEEEecccccc
Confidence            543  2221 11111  1222 45666778899999999999998876532        3445665  666666543 45


Q ss_pred             CCCCHHHHHHHhhh--cCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC------
Q 009673          236 GLVDYDMLEKTAIL--FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF------  302 (529)
Q Consensus       236 ~~iD~d~le~~i~~--~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~------  302 (529)
                      +.+|++.+.+.+..  .+++++++++|+||+  ..   .+++|.++|++|++++|+|++ |.++.+.+....+.      
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~iii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~-Y~~l~~~~~~~~~~~~~~~~  236 (401)
T d7aata_         158 CSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMA-YQGFASGDINRDAWALRHFI  236 (401)
T ss_dssp             TEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEES-CTTTTTSCHHHHTHHHHHHH
T ss_pred             ccccHHHHHHHHhcCCCceEEEEecCCCCCccccCCHHHHHHHHHHHhcceEEEEEecc-chhhhcCCcccchhhhhhhh
Confidence            78899998887753  267899999999997  33   578899999999999999999 56666544221111      


Q ss_pred             C-c-ccEEEecccccc--cCCCCeEEEeeCCCc-chhHHHhhhcccccCCCCCCChHHHHHHHHHHHH-----HhcCchH
Q 009673          303 K-Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPV-LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK-----HAQSPEF  372 (529)
Q Consensus       303 ~-~-aDiv~~S~hK~l--~GprgG~i~~~~~~~-~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~-----~~~~~~~  372 (529)
                      . . --+++.|++|.+  +|+|.||++++.... ....+...+.........+.+...+.++ +..+.     ......+
T Consensus       237 ~~~~~~~~~~s~sk~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~  315 (401)
T d7aata_         237 EQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIA-SLILNTPELRKEWLVEV  315 (401)
T ss_dssp             HTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHH-HHHHHCHHHHHHHHHHH
T ss_pred             hhhcccceeEeccccceeeccccceeecchHHHHHHHHHHHHHHHHhhccccccchHHHHHH-HHhcCCHHHHHHHHHHH
Confidence            0 1 126778888875  899999999988421 0001111111111111122333322221 11221     0011234


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCcE----EecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCe
Q 009673          373 KVYQNKVVSNCRALASRLVELGYK----LVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGG  448 (529)
Q Consensus       373 ~~~~~~i~~~a~~l~~~L~~~G~~----v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~  448 (529)
                      +.+.+++.++++.+.+.|++.|..    .+.+ ...++.|+.     ++.+.++++++++||.+    +||         
T Consensus       316 ~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~-~~G~F~~~~-----ls~e~~~~L~~e~gV~~----~pg---------  376 (401)
T d7aata_         316 KGMADRIISMRTQLVSNLKKEGSSHNWQHITD-QIGMFCFTG-----LKPEQVERLTKEFSIYM----TKD---------  376 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHH-CCSSEEECC-----CCHHHHHHHHHHHCEEC----CTT---------
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCCcceECC-CCeEEEecC-----CCHHHHHHHHHhCCEEE----CCC---------
Confidence            667778888999999999986532    2222 123455543     35677888889999987    443         


Q ss_pred             EEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          449 IRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       449 iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +||++..     ++++++++++++|+++++
T Consensus       377 ~Ris~a~-----~~~~~i~~la~ai~~v~k  401 (401)
T d7aata_         377 GRISVAG-----VASSNVGYLAHAIHQVTK  401 (401)
T ss_dssp             CEEEGGG-----CCTTTHHHHHHHHHHHHC
T ss_pred             cEEEecc-----CCHHHHHHHHHHHHHHhC
Confidence            5998754     456899999999998763

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=99.89  E-value=2e-22  Score=204.50  Aligned_cols=318  Identities=14%  Similarity=0.094  Sum_probs=199.0

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.|+|..++|+  +|+.+++++...+.+ + ..||..    +.   .+++    +.+++++|++++    +|.+++|+ +
T Consensus        23 ~~idls~~~np~~~p~~~~~a~~~~~~~-~-~~Yp~~----~~---~~Lr----~aia~~~~v~~~----~I~~~~g~~~   85 (355)
T d1lc5a_          23 QLLDFSANINPLGMPVSVKRALIDNLDC-I-ERYPDA----DY---FHLH----QALARHHQVPAS----WILAGNGETE   85 (355)
T ss_dssp             GSEECSSCCCTTCCCHHHHHHHHHTGGG-G-GSCCCT----TC---HHHH----HHHHHHHTSCGG----GEEEESSHHH
T ss_pred             heEEccCCCCCCCCCHHHHHHHHHHHHH-h-ccCCCC----Ch---HHHH----HHHHHHhCCCHH----HEEecccHHH
Confidence            46889888774  689999999876532 2 234421    11   2344    667888999875    56678888 6


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCC-CCCCHHHHHHHhhhcCCcEEEEc
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPKLIIAG  258 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~-~~iD~d~le~~i~~~~pklIi~~  258 (529)
                      ++..++.++.+  +.+++..|.+..+.        ......+.  .++.++++.++ +.++ +++++.+.. ++|+|+++
T Consensus        86 ~~~~~~~~~~~--~~~~v~~p~~~~~~--------~~~~~~~~--~~~~v~~~~~~~~~~~-~~~~~~~~~-~~~~v~l~  151 (355)
T d1lc5a_          86 SIFTVASGLKP--RRAMIVTPGFAEYG--------RALAQSGC--EIRRWSLREADGWQLT-DAILEALTP-DLDCLFLC  151 (355)
T ss_dssp             HHHHHHHHHCC--SEEEEEESCCTHHH--------HHHHHTTC--EEEEEECCGGGTTCCC-TTHHHHCCT-TCCEEEEE
T ss_pred             HHHHHHhhhcc--ccccccCCccceec--------cccccccc--cceeeeeeccCCccce-eeeeecccc-ccceeeee
Confidence            66655555543  33344445443211        12223444  34444454333 4555 556667766 89999999


Q ss_pred             CCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC-C--cccEEEecccccc--cCCCCeEEEeeC
Q 009673          259 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K--YCDVVTTTTHKSL--RGPRGGMIFFKK  328 (529)
Q Consensus       259 ~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-~--~aDiv~~S~hK~l--~GprgG~i~~~~  328 (529)
                      .|+||+  ..+   +++|.++|++|++++++|++++. +...+....+. .  ...+++.|++|++  +|+|.||+++++
T Consensus       152 nP~NPtG~~~~~e~l~~i~~~a~~~~~~li~De~y~~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlR~G~~i~~~  230 (355)
T d1lc5a_         152 TPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFID-FIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD  230 (355)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGG-GSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCC
T ss_pred             cccCcccccchhhhhhhhhhhccccccccccccceee-eeeecccccccccccccceeecccccccccccccccceeccc
Confidence            999997  343   67788889999999999999653 33222111111 1  2348889999985  799999999987


Q ss_pred             CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceE
Q 009673          329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLV  407 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~  407 (529)
                      +     .+...++....+..  .....+.++. .+++.  ...+.+.+++++++++++.+.|.+. |+.+.+.  ..+++
T Consensus       231 ~-----~~~~~~~~~~~~~~--~~~~~~~~a~-~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~--~~~f~  298 (355)
T d1lc5a_         231 D-----AAMARMRRQQMPWS--VNALAALAGE-VALQD--SAWQQATWHWLREEGARFYQALCQLPLLTVYPG--RANYL  298 (355)
T ss_dssp             H-----HHHHHHHHHSCTTC--SCHHHHHHHH-HGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCC--SSSEE
T ss_pred             h-----hhhHHHHhhcCCcc--cccccccccc-ccccc--cchhHHHHHHHHHHHHHHHHHHhhcCCcEECCC--CCEEE
Confidence            3     34454544332221  2222222222 23321  1234667778888899999999884 7776543  35677


Q ss_pred             EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      |+++..   +..++.+.|.++||.|......   +...+++|||++.       +++|++++.++|++++
T Consensus       299 ~~~~~~---~~~~~~~~L~~~gv~vr~~~~f---~~~~~~~iRis~~-------~~~e~~~li~aL~~il  355 (355)
T d1lc5a_         299 LLRCER---EDIDLQRRLLTQRILIRSCANY---PGLDSRYYRVAIR-------SAAQNERLLAALRNVL  355 (355)
T ss_dssp             EEEESC---TTCCHHHHHHTTTEECEECTTS---TTCCTTEEEEECC-------CHHHHHHHHHHHHHHC
T ss_pred             EEECCC---CHHHHHHHHHHCCcEEEeCccC---CCCCCCEEEEEeC-------CHHHHHHHHHHHHHhC
Confidence            887753   3455777788899998543211   1234689999863       4799999999998764

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=1.8e-23  Score=220.51  Aligned_cols=327  Identities=18%  Similarity=0.209  Sum_probs=216.7

Q ss_pred             CCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccc
Q 009673          132 EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFM  211 (529)
Q Consensus       132 ~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~  211 (529)
                      .+.+|.+.|++++.++++|    ++++++||.+.     .+.++||+.||..++.+++++||.++..+..+..+.+|.|.
T Consensus        62 ~~~~gd~~Y~~~~~~~~le----~~~a~l~G~~~-----~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~~i~~~~~~~  132 (467)
T d2v1pa1          62 AMMRGDEAFSGSRSYYALA----ESVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFF  132 (467)
T ss_dssp             HTTSCCCCSSSCHHHHHHH----HHHHHHTCCSE-----EEEECSSTTTHHHHHHHHHHHHHHHHCCCTTTCEEEESSCC
T ss_pred             hccccchhhcCCchHHHHH----HHHHHHHCCCE-----EEECCCCHHHHHHHHHHHhhccceEecCCCCcEEEEecccc
Confidence            3456677899999999998    67889999986     36679999999999999999999998888777766666543


Q ss_pred             ccc-cccccccceEEEEEcccC---------CCCCCCCHHHHHHHhhhcC---CcEEEEcCCCCC---CC---CCHHHHH
Q 009673          212 TPK-RRVSGTSIYFESMPYRLD---------ESTGLVDYDMLEKTAILFR---PKLIIAGASAYP---RD---FDYPRMR  272 (529)
Q Consensus       212 ~~~-~~i~~~g~~~~~v~~~v~---------~~~~~iD~d~le~~i~~~~---pklIi~~~s~~p---~~---~d~~~i~  272 (529)
                      ... ..+...|.  .++.++.+         ...+.+|++++++.+++..   +++|++...++.   ..   .++++|+
T Consensus       133 ~~~~~~~~~~G~--~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~i~~e~~~~~~gg~~~~~~~l~~i~  210 (467)
T d2v1pa1         133 DTTQGHSQINGC--TVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMY  210 (467)
T ss_dssp             HHHHHHHHHTTC--EEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHH
T ss_pred             cccHHHHHHcCC--eeeecccccccccccccccccCCCHHHHHHHHhhcCccccceeeecceeeccccccCCHHHHHHHH
Confidence            221 12344554  44444332         1246799999999998643   456666543322   12   3688999


Q ss_pred             HHHHHhCCEEEEecccccccccccc------cCCC--------CCcccEEEecccccccCCCCeEEEeeCCCcchhHHHh
Q 009673          273 QIADAVGALLMMDMAHISGLVAASV------VADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELES  338 (529)
Q Consensus       273 ~ia~~~g~~livD~ah~~Gli~~~~------~~~~--------~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~  338 (529)
                      +||++||++|++|+||..|....+.      ....        +.++|++++|+||.+++|.||+++.+++     .+..
T Consensus       211 ~ia~~~g~~l~~D~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~K~~~~~~gg~i~~~~~-----~~~~  285 (467)
T d2v1pa1         211 SIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDD-----SFFD  285 (467)
T ss_dssp             HHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSCEEEEECSG-----GGHH
T ss_pred             HHHHHcCCEEEEechhhhccccccccccccccCCcccccchhhcccCCEEEecCCCCCCCCCceeEEecch-----hhhh
Confidence            9999999999999999876543211      1111        2258999999999999999999999874     2221


Q ss_pred             hh---c-----ccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEc
Q 009673          339 AI---N-----NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVD  410 (529)
Q Consensus       339 ~i---~-----~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~  410 (529)
                      ..   .     ...++ ..++.....+++++..+.+...   .++.++..+++++|.+.|.+.++.+...  ..|...++
T Consensus       286 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~v~~~--~~~~~~~~  359 (467)
T d2v1pa1         286 VYTECRTLCVVQEGFP-TYGGLEGGAMERLAVGLYDGMN---LDWLAYRIAQVQYLVDGLEEIGVVCQQA--GGHAAFVD  359 (467)
T ss_dssp             HHHHHHHHHHHTTSSC-CCCCCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHHTTCCEEEE--CSSCEEEE
T ss_pred             HHHhhcccccccccCc-chhhhHHHHHHHHHHHhHHhhh---HHHHHHHHHHHHHHHHHHHhcCCcccCC--Cccceeec
Confidence            11   1     11112 2334445555555555554433   4677888899999999999988766542  23444443


Q ss_pred             cC---C----CCCcH-HHHHHhHhcCCeEEcCCCC------C--CCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673          411 LR---P----MGIDG-ARVEKILDMASITLNKNSV------P--GDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH  474 (529)
Q Consensus       411 ~~---~----~~i~~-~~~~~~L~~~GI~v~~~~~------P--g~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~  474 (529)
                      ..   +    ....+ ..+.+++.+.||.......      |  +...+.....+|++.|.   +.+|++||+++++.|+
T Consensus       360 ~~~~~~~~~~~~~~~~~~~~~ll~~~Gi~~~~~g~~~~~~~~~~~~~~~~~~~~vRlaip~---~~~T~eeiD~vv~~l~  436 (467)
T d2v1pa1         360 AGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPR---ATYTQTHMDFIIEAFK  436 (467)
T ss_dssp             HHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCT---TTCCHHHHHHHHHHHH
T ss_pred             chhhcCCcchhhhhhHHHHHHHHHHcCCeeecccccccccccccCCccCCCcceEEEecCC---CCCCHHHHHHHHHHHH
Confidence            21   1    11112 3356777889987543211      1  11123346789998664   3478999999999999


Q ss_pred             HHHHHHHHH
Q 009673          475 EGVEITLEA  483 (529)
Q Consensus       475 ~~~~~~~~~  483 (529)
                      +++++..++
T Consensus       437 ~v~~~~~~i  445 (467)
T d2v1pa1         437 HVKENAANI  445 (467)
T ss_dssp             HHHHTGGGC
T ss_pred             HHHHHHHhc
Confidence            998765443

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.88  E-value=3.2e-22  Score=210.40  Aligned_cols=303  Identities=15%  Similarity=0.102  Sum_probs=199.4

Q ss_pred             hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673          144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI  222 (529)
Q Consensus       144 ~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~  222 (529)
                      ..+.+.|    ++++++||++..     +.+++|| .+|.+++.++++|||+|++...+|.+++..+.       ...+.
T Consensus        66 ~~i~eae----~~~A~~~ga~~a-----~f~~~Gtt~~n~a~i~a~~~~gd~Vi~~~~~H~Sv~~~~~-------~l~~~  129 (462)
T d1c4ka2          66 GPAVAAE----KHAARVYNADKT-----YFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSAL-------AMAGG  129 (462)
T ss_dssp             THHHHHH----HHHHHHTTCSEE-----EEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHT-------TTTCC
T ss_pred             HHHHHHH----HHHHHHhCCCeE-----EEECCchHHHHHHHHHHhcCCCCeEEecccchHHHHHHHH-------HHhcC
Confidence            4455555    788999999863     4457887 67888899999999999999998876543332       11222


Q ss_pred             eEEEEEcccCCCC-------CCCCHHHHHHHhhh--------cCC-cEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEe
Q 009673          223 YFESMPYRLDEST-------GLVDYDMLEKTAIL--------FRP-KLIIAGASAYPR-DFDYPRMRQIADAVGALLMMD  285 (529)
Q Consensus       223 ~~~~v~~~v~~~~-------~~iD~d~le~~i~~--------~~p-klIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD  285 (529)
                      ...+.+.++++..       ..++.+.+++.+..        .++ .++++..+++.+ ..|+++|+++|+++|++|++|
T Consensus       130 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~G~~~dl~~I~~ia~~~g~~l~vD  209 (462)
T d1c4ka2         130 RPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFD  209 (462)
T ss_dssp             EEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEE
T ss_pred             CceeeecccccccccCCCChHHhhHHHHHhhhhhhcHHhhhccCCceeEEEEeeeeccchhhHHHHHHHHHHcCCEEEEe
Confidence            2344444444322       13455555443321        134 355555666554 789999999999999999999


Q ss_pred             cccccccccccccCCCC----------CcccEEEecccccccCCCCeEEEeeCCCcchhHHH---------hhhcccccC
Q 009673          286 MAHISGLVAASVVADPF----------KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELE---------SAINNAVFP  346 (529)
Q Consensus       286 ~ah~~Gli~~~~~~~~~----------~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~---------~~i~~~~~p  346 (529)
                      +||+.|....+..+...          .++|++++|+||+++++.+|.++..++     +..         ..++.....
T Consensus       210 ~A~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~~S~HK~lg~~~~g~ll~~~~-----~~~~~~~~~~~~~~~~~~~~~  284 (462)
T d1c4ka2         210 SAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKD-----SHIKGQLRYCDHKHFNNSFNL  284 (462)
T ss_dssp             CTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEEC-----GGGTTSTTCCCHHHHHHHHHH
T ss_pred             chhhccccccCcCCcchhhccccccccCCccEEEEecCcccccccceEEEEecc-----ccccccchhhhHHHHHHhhhh
Confidence            99998877654332211          256999999999998888876665543     111         112222222


Q ss_pred             CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC-cEE------ec--------------------
Q 009673          347 GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG-YKL------VS--------------------  399 (529)
Q Consensus       347 ~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G-~~v------~~--------------------  399 (529)
                      ...++|++..++++.++...+.....+++.++..++++++++++.+.+ +..      +.                    
T Consensus       285 ~~t~sp~~~~~asl~~a~~~~~~~~g~~l~~~~~~~a~~~r~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~  364 (462)
T d1c4ka2         285 FMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWR  364 (462)
T ss_dssp             HSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGB
T ss_pred             cccCCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccccccccccchHhhhcccchhc
Confidence            235678888999998888777655567888889999999999998742 111      00                    


Q ss_pred             --CC---------CCCce------EEEcc----------CCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEc
Q 009673          400 --GG---------SDNHL------VLVDL----------RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIG  452 (529)
Q Consensus       400 --~g---------t~~~~------~~v~~----------~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig  452 (529)
                        ++         .+..+      +.+..          ...|+++..+.+.|+++||.+...         ..+.||+.
T Consensus       365 ~~~~~~~~~~~~~~~~~~~~Dp~k~~l~~~gi~~~~g~~~~~G~~~~~~~~~L~~~gI~~e~~---------~~~~i~~~  435 (462)
T d1c4ka2         365 FEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKS---------DLNSILFL  435 (462)
T ss_dssp             CCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEE---------CSSEEEEE
T ss_pred             cCCcchhccccccCccceecccceeEEecCCccccccchhhcCCcHHHHHHHHHHcCCeeecc---------CCCeEEEE
Confidence              00         00000      11211          123567788999999999976432         24689997


Q ss_pred             cCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          453 SPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       453 ~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      +.    .+.|++|++++++.|.++.+..
T Consensus       436 ~s----~~~T~edid~li~aL~ei~r~~  459 (462)
T d1c4ka2         436 MT----PAETPAKMNNLITQLLQLQRLI  459 (462)
T ss_dssp             CC----TTCCHHHHHHHHHHHHHHHHHH
T ss_pred             ec----CCCCHHHHHHHHHHHHHHHHHH
Confidence            65    3567999999999999876643

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=5.8e-21  Score=199.61  Aligned_cols=368  Identities=11%  Similarity=0.055  Sum_probs=238.1

Q ss_pred             ccCChH-HHHHHHHHHHHhh-cceeEecC-CCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673           84 GEADPE-VCEIITKEKERQF-KSLELIAS-ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA  160 (529)
Q Consensus        84 ~~~d~~-~~~~~~~e~~~~~-~~i~L~as-en~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~  160 (529)
                      ...+++ .++++..+..... ..++|..- ..++++.+.+.+...+...+..       +.-.+...++|..+.++++++
T Consensus        33 ~~~~~~~~~~~i~d~l~~dg~~~~n~asf~~t~~~~~~~~l~~~~~~~N~~~-------~~~~P~~~~lE~~~v~~la~L  105 (450)
T d1pmma_          33 HEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWID-------KEEYPQSAAIDLRCVNMVADL  105 (450)
T ss_dssp             SCCCHHHHHHHHHHHGGGSCCGGGBCSCCSCCCCCHHHHHHHHHTTTCBTTC-------TTTSHHHHHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHhcCCCC-------cccCccHHHHHHHHHHHHHHH
Confidence            344555 7888877653222 12455332 3467899999998877654421       111244678999999999999


Q ss_pred             cCCCCCCC--ceeeecCChHHHHHHHHHhhc-----------CCCC-EEEEcCCCCCccccccccccccccccccceEEE
Q 009673          161 FNLDENKW--GVNVQPLSGSPANFEVYTAIL-----------KPHD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES  226 (529)
Q Consensus       161 ~g~~~~~~--~~~V~~~sGs~A~~~~l~all-----------~pGD-~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~  226 (529)
                      +|++....  ..-+.+++||+||+.++.+.-           .+++ .++++...   |++..     +.+...|.  +.
T Consensus       106 ~~~p~~~~~~~~G~~t~GgSeA~~~a~~aar~~~~~~~~~~g~~~~~~~~~~~~~---H~s~~-----Kaa~~~gi--~~  175 (450)
T d1pmma_         106 WHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPV---QICWH-----KFARYWDV--EL  175 (450)
T ss_dssp             TTCCCCTTSCCSEEEESSHHHHHHHHHHHHHHHHHHHHHHHTCCCSCCEEEESSC---CHHHH-----HHHHHTTC--EE
T ss_pred             hCCCccccCCCcCeeeCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCceEEeccc---HHHHH-----HHHHHcCC--Cc
Confidence            99964221  112444566699998777641           2334 35554432   43322     34566676  55


Q ss_pred             EEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--CCCCCHHHHHHHH------HHhCCEEEEeccccccccccccc
Q 009673          227 MPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIA------DAVGALLMMDMAHISGLVAASVV  298 (529)
Q Consensus       227 v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~--p~~~d~~~i~~ia------~~~g~~livD~ah~~Gli~~~~~  298 (529)
                      ..++++++++.+|+++|++++++ +|.+|++...++  +...|+++|.+||      +++|+|+++|+|++.+..+....
T Consensus       176 ~~v~~~~~~~~~d~~~L~~~i~~-~t~~Vv~t~gtt~tG~~dpv~~i~~i~~~~~~a~~~~i~lHVDAA~gG~~~p~~~~  254 (450)
T d1pmma_         176 REIPMRPGQLFMDPKRMIEACDE-NTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAP  254 (450)
T ss_dssp             EECCCBTTBCSCCHHHHHHHCCT-TEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCT
T ss_pred             eEeeecCCCCcCcHHHHHHHhhh-CceEEEeeeeeccCCCccccchhhHHHHHHHHHhccCcEEEeehhhccceeeeech
Confidence            56667766799999999999988 788777663333  3377888888775      45799999999976554432211


Q ss_pred             --CCC--CCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhh-hcc--------cccCCCCCCChHHHHHHHHHHH
Q 009673          299 --ADP--FKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA-INN--------AVFPGLQGGPHNHTIGGLAVCL  364 (529)
Q Consensus       299 --~~~--~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~-i~~--------~~~p~~~g~p~~~~iaala~al  364 (529)
                        ...  ++++|.+++|+|||+.+|.| |+++++++     .+... ...        .......++.....+.++...+
T Consensus       255 ~~~~~~~~~~aDSi~~s~HK~~~~p~g~g~l~~r~~-----~~~~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~~~~~~l  329 (450)
T d1pmma_         255 DIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDE-----EALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEF  329 (450)
T ss_dssp             TCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSG-----GGSCGGGCEEEEETTEEEEECCSCCSCBSHHHHHHHHHH
T ss_pred             hhhhhhcccceeEeecChhhccCCCCCeeEEEecCh-----hhhhhhcccccCcCCCCcCCCcccCccchHHHHHHHHHH
Confidence              111  23799999999999988988 99999875     22111 100        0012233443444555566667


Q ss_pred             HHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCC-CCce--EEEccCC---CCCcHHHHHHhHhcCCeEEcCCCC
Q 009673          365 KHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGS-DNHL--VLVDLRP---MGIDGARVEKILDMASITLNKNSV  437 (529)
Q Consensus       365 ~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt-~~~~--~~v~~~~---~~i~~~~~~~~L~~~GI~v~~~~~  437 (529)
                      ......+++++.++..+++++|.+.|++ .+++++.++. ...+  +.+.+.+   .+++..++...|.+.|..|+....
T Consensus       330 ~~~G~~G~~~~~~~~~~la~~l~~~L~~~~~~el~~~~~p~~~l~~V~Fr~~~~~~~~~~~~~l~~~L~~~Gw~v~~~~~  409 (450)
T d1pmma_         330 LRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTL  409 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCEEEEEECCTTTBSSEEEEEECTTCCCSSCHHHHHHHHHTTTCBCCEEEC
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeCCCCCCceEEEEEecCCcccCCCCHHHHHHHHHHcCCeeeccCc
Confidence            7666678999999999999999999998 4688876432 1223  3333322   345667889999999988754434


Q ss_pred             CCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          438 PGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       438 Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      |.+.  .....+|+.+..    ++++++++++++-|++++...
T Consensus       410 p~~~--~~~~~lRvvv~~----~~t~e~~d~lv~dl~~~v~~l  446 (450)
T d1pmma_         410 GGEA--TDIVVMRIMCRR----GFEMDFAELLLEDYKASLKYL  446 (450)
T ss_dssp             CTTC--TTCEEEEEECCT----TCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCc--CCcEEEEEEccC----CCCHHHHHHHHHHHHHHHHHH
Confidence            4321  123569997643    456899999999988887644

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.88  E-value=1.5e-22  Score=206.78  Aligned_cols=285  Identities=18%  Similarity=0.093  Sum_probs=166.2

Q ss_pred             HHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEE-cC-CCCCccccccccccccccccccceEEEEEcccC
Q 009673          155 KRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMG-LD-LPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD  232 (529)
Q Consensus       155 ~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~-~~-~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~  232 (529)
                      +...+.++.++.+  ..+.+.+|++|+++++.+|. |||.|++ ++ +.|.++.        ..+...|.  +++.  . 
T Consensus        57 ~~~~~~~~~~~~e--~~~~~~~~~~a~~~~l~al~-~~~~vi~~~~~~~~~~~~--------~~~~l~g~--~~v~--~-  120 (366)
T d2aeua1          57 EYGLKHLGGDEND--KCVGFNRTSSAILATILALK-PKKVIHYLPELPGHPSIE--------RSCKIVNA--KYFE--S-  120 (366)
T ss_dssp             HHHHHHHTCCTTE--EEEEESSHHHHHHHHHHHHC-CSEEEEECSSSSCCTHHH--------HHHHHTTC--EEEE--E-
T ss_pred             HHHHHHccCCCcc--EEEEeCCHHHHHHHHHHHhC-CCCEEEEecCCCcchhHH--------HHHHhcCC--eEEC--C-
Confidence            4456667776543  12333455699999999976 5555544 32 3343321        23455665  3322  2 


Q ss_pred             CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC---CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEE
Q 009673          233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR---DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVV  308 (529)
Q Consensus       233 ~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~---~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv  308 (529)
                           -|+|+|++.+++ ++|+|++++|+|+.   ..|+++|+++|++||+++++|++|..+.......+.+.. ++|++
T Consensus       121 -----~d~e~l~~~i~~-~tk~i~~~~p~n~~~~~~~~l~~i~~ia~~~~~~~i~De~y~~~~~~~~~~~~~~~~~~di~  194 (366)
T d2aeua1         121 -----DKVGEILNKIDK-DTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLV  194 (366)
T ss_dssp             -----SCHHHHHTTCCT-TEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEE
T ss_pred             -----CCHHHHHHhcCC-CceEEEEEecCCCCcCCHHHHHHHHHHhccCcEEEEEecCccccccccccCCCHhhcCceEE
Confidence                 279999999988 89999999887765   347899999999999999999998766543333333333 68999


Q ss_pred             EecccccccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH---
Q 009673          309 TTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA---  385 (529)
Q Consensus       309 ~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~---  385 (529)
                      ++|+||+++|||+||+++++      ++.+++...........+.. ...++..+|+...   . ..+++..++++.   
T Consensus       195 ~~S~sK~~~g~~~G~i~~~~------~~i~~~~~~~~~~g~~~~~~-~~~a~~~aL~tl~---~-~r~~~~~~~~~~i~~  263 (366)
T d2aeua1         195 VTSTDKLMEGPRGGLLAGKK------ELVDKIYIEGTKFGLEAQPP-LLAGIYRALKNFN---L-ERIRKAFERAKNFDL  263 (366)
T ss_dssp             EEETTSSSSSCSCEEEEEEH------HHHHHHHHHHHTTTCBCCHH-HHHHHHHHHHHCC---H-HHHHHHHHHHHHCCC
T ss_pred             EecccccccccceeEEEecH------HHHHHHHHHHhcccccCCHH-HHHHHHHHHHhcc---H-HHHHHHHHHHHHHHH
Confidence            99999999999999999998      77777654332221222222 2333334565432   1 122333333333   


Q ss_pred             -HHHHHHh-----cCcEE-ecCCCCCceEEEccCCCC---C-cH-HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEcc
Q 009673          386 -LASRLVE-----LGYKL-VSGGSDNHLVLVDLRPMG---I-DG-ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS  453 (529)
Q Consensus       386 -l~~~L~~-----~G~~v-~~~gt~~~~~~v~~~~~~---i-~~-~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~  453 (529)
                       +.+.+..     .++.. .......++++.......   + +. +...++|+++||.+    +||...|...+.+||++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ll~~~gV~~----ip~~~~p~~~~~lRis~  339 (366)
T d2aeua1         264 SKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNYGIIT----ITVAGMPGASKSLRIDL  339 (366)
T ss_dssp             HHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHCEEC----STTSSSCSSCCSEEEET
T ss_pred             HHHhhhhccccccccccCcccccCccchhccCCCcceeecccCHHHHHHHHHHhCCEEE----EECCCCCCCCCEEEEec
Confidence             2233322     12211 111112333333222110   0 12 33556778899997    56654444667899997


Q ss_pred             CCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          454 PAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       454 ~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      ..-++..+.   .+++.+.|.+.+++
T Consensus       340 ~~~~~~~i~---~d~l~~ai~~~lK~  362 (366)
T d2aeua1         340 TSRDAERID---DNYIIKAIVESIKM  362 (366)
T ss_dssp             TSGGGGGSC---HHHHHHHHHHHHHH
T ss_pred             cccchhhCC---HHHHHHHHHHHHHH
Confidence            654433233   34455555555553

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.87  E-value=2.7e-22  Score=211.09  Aligned_cols=326  Identities=17%  Similarity=0.167  Sum_probs=206.1

Q ss_pred             CCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccc
Q 009673          135 PGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPK  214 (529)
Q Consensus       135 p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~  214 (529)
                      .|.++|++++.++++|    +++++++|.+.     .+.++||++||..++.+++++||+++..+..+..+..|+.. ..
T Consensus        66 ~gd~~y~~~~~~~~le----~~~a~l~g~~~-----~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~i~~~~h~~t-~~  135 (465)
T d1ax4a_          66 TGDEAYAGSRNYYDLK----DKAKELFNYDY-----IIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDT-TA  135 (465)
T ss_dssp             TCCCCSSSCHHHHHHH----HHHHHHHCCCE-----EEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHH-HH
T ss_pred             hhhhhhccChHHHHHH----HHHHHHHCCCE-----EEECCCcHHHHHHHHHHHHHHHHhcCCCCCeEEeccchhhh-hH
Confidence            4556788999999988    66788999985     36679999999999999988877665444333221112110 00


Q ss_pred             cccccccceEEEEEc---------ccCCCCCCCCHHHHHHHhhhcC---CcEEEEcCCCCCC---C---CCHHHHHHHHH
Q 009673          215 RRVSGTSIYFESMPY---------RLDESTGLVDYDMLEKTAILFR---PKLIIAGASAYPR---D---FDYPRMRQIAD  276 (529)
Q Consensus       215 ~~i~~~g~~~~~v~~---------~v~~~~~~iD~d~le~~i~~~~---pklIi~~~s~~p~---~---~d~~~i~~ia~  276 (529)
                      ..+...|.  .++..         +.++.++.+|+++++++|++..   +.++++..+++..   .   .++++|+++|+
T Consensus       136 ~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~~~~  213 (465)
T d1ax4a_         136 AHVELNGC--KAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAK  213 (465)
T ss_dssp             HHHHHTTC--EEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHH
T ss_pred             HHHHHcCC--eeecccccccCCCCCCCCccCccCHHHHHHHHHhhccccccceeeccccccCceecCCHHHHHHHHHHHH
Confidence            01122232  33322         1233457899999999998643   3455555444332   2   35788999999


Q ss_pred             HhCCEEEEecccccccccccc------cC--------CCCCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhc-
Q 009673          277 AVGALLMMDMAHISGLVAASV------VA--------DPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAIN-  341 (529)
Q Consensus       277 ~~g~~livD~ah~~Gli~~~~------~~--------~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~-  341 (529)
                      +||++||+|++|..|....+.      ..        ..+..+|++++|.||.+++|++|+++.++..    .+..... 
T Consensus       214 ~~g~~l~~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~k~~~~~~~g~l~~~~~~----~~~~~~~~  289 (465)
T d1ax4a_         214 QHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIGGLVAIRDNE----EIFTLARQ  289 (465)
T ss_dssp             HHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSCEEEEESSCH----HHHHHHHH
T ss_pred             HcCCEEEEECcchhhhhcccccccccccccchhhhccccccccceeEeecccCcccccceeEeecchH----HHHHhhhc
Confidence            999999999998766443210      00        0112478999999999999999999998741    2222211 


Q ss_pred             ---ccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCC----
Q 009673          342 ---NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM----  414 (529)
Q Consensus       342 ---~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~----  414 (529)
                         ........++.....+++++..+.+...   +++.++..+++++|.+.|++.|++++.+ ...+...++....    
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~---~~~~~~~~~~~~~l~~~L~~~g~~~v~~-~~~~~~~~~~~~~~~~~  365 (465)
T d1ax4a_         290 RCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE---EEYLHYRIGQVKYLGDRLREAGIPIQYP-TGGHAVFVDCKKLVPQI  365 (465)
T ss_dssp             HHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHHTTCCBCSS-CCSSEEEEESTTTCTTS
T ss_pred             cccccccCCCcchhhHHHHHHHhhhhHHhhh---HHHHHHHHHHHHHHHHHHHhhcCccccC-CCcceeeeehhhhcCCC
Confidence               1111222344444455555555554433   4567777888999999999999888765 3456555554211    


Q ss_pred             ---CCc-HHHHHHhHhcCCeEEcCCCC--------CCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHH
Q 009673          415 ---GID-GARVEKILDMASITLNKNSV--------PGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLE  482 (529)
Q Consensus       415 ---~i~-~~~~~~~L~~~GI~v~~~~~--------Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~  482 (529)
                         ... ...+.++|.+.||.+.....        .|...+...+.+|++.|..   .+|++||+++++.|.++++...+
T Consensus       366 ~~~~~~~~~~~~~ll~~~GI~~~~~~~~~~~~~~~~g~~~~~~~~~vRlalP~~---~~T~eeiD~vv~~l~~v~~~~~~  442 (465)
T d1ax4a_         366 PGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARR---VYTNDHMDYIADALIGLKEKFAT  442 (465)
T ss_dssp             CGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTT---SSCHHHHHHHHHHHHTTHHHHTT
T ss_pred             ccccchhHHHHHHHHHhcCceeccccccccccccccCCccCCCCCceEEeCCCC---CCCHHHHHHHHHHHHHHHHHHHh
Confidence               111 23466778889997643221        1222233456899987743   36899999999999998876644


Q ss_pred             H
Q 009673          483 A  483 (529)
Q Consensus       483 ~  483 (529)
                      +
T Consensus       443 i  443 (465)
T d1ax4a_         443 L  443 (465)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.87  E-value=1.3e-21  Score=201.44  Aligned_cols=335  Identities=14%  Similarity=0.110  Sum_probs=210.0

Q ss_pred             cceeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHH
Q 009673          103 KSLELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN  181 (529)
Q Consensus       103 ~~i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~  181 (529)
                      +.+.|. ++..++|+.|++++..++.+.+..+  ..+...+..+.+.+ +.+++.+++++|++++++   +.+.++|+++
T Consensus        27 ~~iYLd~as~g~~p~~v~~a~~~~l~~~~~~~--~~~~~~~~~~~~~~-e~~R~~iA~llga~~~ei---~~~~~~T~~~  100 (404)
T d1qz9a_          27 GVIYLDGNSLGARPVAALARAQAVIAEEWGNG--LIRSWNSAGWRDLS-ERLGNRLATLIGARDGEV---VVTDTTSINL  100 (404)
T ss_dssp             TCEECCTTTSCCCBTTHHHHHHHHHHTCCCCC--GGGHHHHTSGGGHH-HHHHHHHHTTTTCCTTSE---EECSCHHHHH
T ss_pred             CCEEcCCcccccCCHHHHHHHHHHHHHHhccc--CcccccchhHHHHH-HHHHHHHHHHhCCCCCcE---EEecCchHHH
Confidence            345564 4667889999999999887665432  21111111223333 467899999999999763   3345566777


Q ss_pred             HHHHHh------hcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673          182 FEVYTA------ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI  255 (529)
Q Consensus       182 ~~~l~a------ll~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI  255 (529)
                      ..++.+      ...+||.|++.+..+.......        ...+.  +.....++ .++.++.+.+++++++ +|++|
T Consensus       101 ~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~--------~~~~~--~~~~~~~~-~~~~~~~~~~~~~i~~-~T~lV  168 (404)
T d1qz9a_         101 FKVLSAALRVQATRSPERRVIVTETSNFPTDLYI--------AEGLA--DMLQQGYT-LRLVDSPEELPQAIDQ-DTAVV  168 (404)
T ss_dssp             HHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHH--------HHHHH--HHHCSSCE-EEEESSGGGHHHHCST-TEEEE
T ss_pred             HHHhhhhhhhhcccCCCcEEEEeccccchHHHHH--------Hhhhh--eeeeecee-ccccccchhHHHhcCC-CceEE
Confidence            665542      2478999998876543221100        00111  11111111 1245677888999988 89999


Q ss_pred             EEcCCCC--CCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC--eEEEeeCCCc
Q 009673          256 IAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG--GMIFFKKDPV  331 (529)
Q Consensus       256 i~~~s~~--p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg--G~i~~~~~~~  331 (529)
                      ++.+.+|  +...|+++|+++|+++|+++++|++|+.|.+..+....   ++|++++|.|||+.+|.|  |+++.++.. 
T Consensus       169 ~i~~v~~~tG~~~pv~~i~~~~~~~~~~~~vD~~q~~g~~~~~~~~~---~~d~~~~s~~K~~~~~~g~~g~~~~~~~~-  244 (404)
T d1qz9a_         169 MLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQA---GADYAIGCTYKYLNGGPGSQAFVWVSPQL-  244 (404)
T ss_dssp             EEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHH---TCSEEEECSSSTTCCCTTCCCEEEECTTT-
T ss_pred             EEecccccccceecHHHHhccccccccceeEEeeccccccccccccc---cceEEEEechhhcccCCceEEEEEechhh-
Confidence            9885443  34899999999999999999999999998764332221   689999999999865554  566666531 


Q ss_pred             chhHHHhhhcc----------------------cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH-
Q 009673          332 LGVELESAINN----------------------AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALAS-  388 (529)
Q Consensus       332 ~~~~l~~~i~~----------------------~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~-  388 (529)
                           .+.+..                      .......+++.......+..++......+.....++.......+.+ 
T Consensus       245 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l  319 (404)
T d1qz9a_         245 -----CDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIEL  319 (404)
T ss_dssp             -----TTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             -----hhhCCccccccCCccccccccccccccccchhhhhhhccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHH
Confidence                 111100                      0001124566666776666666666555554444444444444333 


Q ss_pred             --HHHh-cCcEEecCCC-CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCC-CccCCCCH
Q 009673          389 --RLVE-LGYKLVSGGS-DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPA-MTTRGFSE  463 (529)
Q Consensus       389 --~L~~-~G~~v~~~gt-~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~-~tt~g~~~  463 (529)
                        .+.. .|+.++++.. ..+..++.+...  ++..+.+.|.+.||.+...         .++.||||..+ +||    +
T Consensus       320 ~~~~~~~~~~~i~~p~~~~~r~~~vsf~~~--~~~~v~~~L~~~gi~~~~r---------~~~~lRiS~~h~ynt----~  384 (404)
T d1qz9a_         320 VEQRCAAHELTLVTPREHAKRGSHVSFEHP--EGYAVIQALIDRGVIGDYR---------EPRIMRFGFTPLYTT----F  384 (404)
T ss_dssp             HHHHHTTSCCEECSCSSGGGBCSEEEEECT--THHHHHHHHHTTTEECEEE---------TTTEEEEECCTTTCC----H
T ss_pred             HHhhccCCCEEEECCCCccceeeEEEEecC--CHHHHHHHHHHCCCEEeec---------CCCeEEEECCCCCCC----H
Confidence              3333 6889886521 122222333222  4778899999999976421         24789999744 565    8


Q ss_pred             HHHHHHHHHHHHHHHH
Q 009673          464 KEFVAIADFIHEGVEI  479 (529)
Q Consensus       464 ~d~~~la~~i~~~~~~  479 (529)
                      +|++++++.|+++++.
T Consensus       385 ~did~~~~~L~~vl~~  400 (404)
T d1qz9a_         385 TEVWDAVQILGEILDR  400 (404)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999999874

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.87  E-value=1.5e-21  Score=200.40  Aligned_cols=326  Identities=13%  Similarity=0.121  Sum_probs=213.1

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCCC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH  192 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~pG  192 (529)
                      .+.+-++++.+.|..+.       .++.+.+.+.++|    +++++++|.++     .|.+.|||.|+++++.++ ++||
T Consensus        11 ~~~~~~~~~~~~l~~g~-------~~~~~g~~v~~fE----~~~a~~~g~~~-----~v~~~SGt~Al~lal~~l~~~~g   74 (384)
T d1b9ha_          11 YDDAERNGLVRALEQGQ-------WWRMGGDEVNSFE----REFAAHHGAAH-----ALAVTNGTHALELALQVMGVGPG   74 (384)
T ss_dssp             CCHHHHHHHHHHHHTSC-------CBTTTCSHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHHHHHHTTCCTT
T ss_pred             CCHHHHHHHHHHHHcCC-------eeecCCHHHHHHH----HHHHHHHCcCe-----EEEeCCHHHHHHHHHHHcCCCCC
Confidence            34555667777775431       0122335688888    78899999997     366799999999999998 8999


Q ss_pred             CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHH
Q 009673          193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMR  272 (529)
Q Consensus       193 D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~  272 (529)
                      |+|++++.++.+..        ..+...|.  +++.++++++++.+|++.+++.+++ ++++|++. +.++...|+++|.
T Consensus        75 deVi~p~~t~~a~~--------~ai~~~g~--~p~~~d~~~~~~~~d~~~~~~~i~~-~tk~i~~~-~~~g~~~d~~~i~  142 (384)
T d1b9ha_          75 TEVIVPAFTFISSS--------QAAQRLGA--VTVPVDVDAATYNLDPEAVAAAVTP-RTKVIMPV-HMAGLMADMDALA  142 (384)
T ss_dssp             CEEEEESSSCTHHH--------HHHHHTTC--EEEEECBCTTTCCBCHHHHHHHCCT-TEEEECCB-CGGGCCCCHHHHH
T ss_pred             CEEEEecccccccc--------cccccccc--ccccccccccccccchhhhcccccc-cccccccc-cccccccccccch
Confidence            99999987765432        13445564  8888888888899999999999988 88887664 4444578999999


Q ss_pred             HHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcccc--------
Q 009673          273 QIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAV--------  344 (529)
Q Consensus       273 ~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~--------  344 (529)
                      ++|+++|++||.|+||+.|....+.....+..+.+++++.+|.+++..||+|+++++     ++.++++...        
T Consensus       143 ~~~~~~~i~lieD~a~a~ga~~~g~~~g~~g~~~~~Sf~~~K~i~~g~GG~i~t~~~-----~~~~~~~~~~~~g~~~~~  217 (384)
T d1b9ha_         143 KISADTGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDG-----ETEKYETAFLRHSCGRPR  217 (384)
T ss_dssp             HHHHHHTCCBCEECTTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTT-----CHHHHHHHHHHTBTTCCT
T ss_pred             hhhhhhhhhhhhhhceecccccCCEecCcccccceecccccccccccccchhhhhhH-----HHHHHHHHHHhcCCCCcc
Confidence            999999999999999999887655433222223355556679998889999999876     4433322110        


Q ss_pred             ----c-CCCCCC-ChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecC---CC-CCc-eEEEccC
Q 009673          345 ----F-PGLQGG-PHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSG---GS-DNH-LVLVDLR  412 (529)
Q Consensus       345 ----~-p~~~g~-p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~---gt-~~~-~~~v~~~  412 (529)
                          + ....|. ..++.+.| +.++.++  ..+++..++.+++++.+.+.|.+ .++.....   .. .++ +.++.+.
T Consensus       218 ~~~~~~~~~~G~n~rms~l~A-aig~~qL--~~ld~~~~~R~~~~~~y~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~  294 (384)
T d1b9ha_         218 DDRRYFHKIAGSNMRLNEFSA-SVLRAQL--ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIP  294 (384)
T ss_dssp             TCSSCCCCSCCCBCBCBHHHH-HHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECT
T ss_pred             ccccccccccccccccccchh-hhhhhhh--hhcccchhhhhhhhhhhhhhhhcccccccccccccccccccccccceec
Confidence                0 000111 11112222 1234443  24567778888899999999987 46544321   11 122 3333332


Q ss_pred             CCC-CcHHHHHHhHhcCCeEEcCCCCCCCCCC------------------------CCCCeEEEccCCCccCCCC-HHHH
Q 009673          413 PMG-IDGARVEKILDMASITLNKNSVPGDKSA------------------------LVPGGIRIGSPAMTTRGFS-EKEF  466 (529)
Q Consensus       413 ~~~-i~~~~~~~~L~~~GI~v~~~~~Pg~~~~------------------------~~~~~iRig~~~~tt~g~~-~~d~  466 (529)
                      ... .+.+.+.+.|.+.||.+...+.|-+..+                        +....|+|.++    .+++ ++|+
T Consensus       295 ~~~~~~Rd~l~~~L~~~GI~~~~~y~plh~~~~~~~~~~~~~~~~~~~~~~Pna~~l~~~~l~LP~~----~~Lt~e~ei  370 (384)
T d1b9ha_         295 GLTEERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHR----VLLAGEPEL  370 (384)
T ss_dssp             TCCHHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGG----GGGSCHHHH
T ss_pred             ccccccHHHHHHHHHHCCCCeeeeCcchhcCHHHHhcCCCcccccccccCCHHHHHHHhCEEEccCC----CCCCCHHHH
Confidence            111 1234688999999999876543322100                        00123566432    2365 6899


Q ss_pred             HHHHHHHHHHHHH
Q 009673          467 VAIADFIHEGVEI  479 (529)
Q Consensus       467 ~~la~~i~~~~~~  479 (529)
                      +++++.|++++..
T Consensus       371 ~~I~~~i~~~l~~  383 (384)
T d1b9ha_         371 HATAEIIADAVAR  383 (384)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998864

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=4.2e-21  Score=197.72  Aligned_cols=333  Identities=15%  Similarity=0.149  Sum_probs=200.4

Q ss_pred             cceeEecC----CC---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCC-CCceeeec
Q 009673          103 KSLELIAS----EN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN-KWGVNVQP  174 (529)
Q Consensus       103 ~~i~L~as----en---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~-~~~~~V~~  174 (529)
                      +.|+|..+    ++   ++++.|++|+...+.+..+.+|+.   ..|   ..++.+.+.+++.+..+.... +..+.++.
T Consensus        27 ~kInL~iG~~~d~~g~~p~~~~V~~A~~~~~~~~~~~~Y~p---~~G---~~~lR~aia~~~~~~~~~~~~~~~~~~~~~  100 (396)
T d2q7wa1          27 GKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLG---IDG---IPEFGRCTQELLFGKGSALINDKRARTAQT  100 (396)
T ss_dssp             -CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCC---TTC---CHHHHHHHHHHHHCTTCHHHHTTCEEEEEE
T ss_pred             CcEEeeCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCC---CcC---CHHHHHHHHHHHHhhcCCcccccceeeecc
Confidence            46899876    22   456899999887766555545543   223   346666666777766655321 11122223


Q ss_pred             CChHHH--HHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhc-
Q 009673          175 LSGSPA--NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILF-  250 (529)
Q Consensus       175 ~sGs~A--~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~-  250 (529)
                      ++|+.+  +...+.+++++||.|++++|.+.++..        .+...|.  +++.++... +++..+.+.+++..... 
T Consensus       101 ~~~~~~~~l~~~~l~~~~~gd~Vlvp~P~y~~y~~--------~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (396)
T d2q7wa1         101 PGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKS--------VFNSAGL--EVREYAYYDAENHTLDFDALINSLNEAQ  170 (396)
T ss_dssp             SHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHH--------HHHHTTC--EEEEEECEETTTTEECHHHHHHHHTTCC
T ss_pred             chHHHHHHHHHHHHhhcccceEEEEecCCCccchH--------HHHHcCC--eeEecccccccccccccchHHHHHHHhc
Confidence            333333  334445568999999999998766532        3345665  555555543 34667777776655432 


Q ss_pred             -CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCC-CCC------cccEEEecccccc-
Q 009673          251 -RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD-PFK------YCDVVTTTTHKSL-  316 (529)
Q Consensus       251 -~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~-~~~------~aDiv~~S~hK~l-  316 (529)
                       +++++++++|+||+  ..   .+++|.++|++|++++|+|++ |.++.+.+.... .+.      ...+++.|++|++ 
T Consensus       171 ~~~~~i~~~~P~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~-Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~  249 (396)
T d2q7wa1         171 AGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFA-YQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFG  249 (396)
T ss_dssp             TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEES-CTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTT
T ss_pred             cCcEEEEecCCcCCcCeecCHHHHHHHHHHHhcCCeEEEEecc-ccccccCCccCchHhhhhhhhccccccccccccccc
Confidence             56788888999997  33   477899999999999999999 567765432111 110      1237778889975 


Q ss_pred             -cCCCCeEEEeeCCCcc-hhHHHhhhcccccCCCCCCChHHHHHHHHHHHH-----HhcCchHHHHHHHHHHHHHHHHHH
Q 009673          317 -RGPRGGMIFFKKDPVL-GVELESAINNAVFPGLQGGPHNHTIGGLAVCLK-----HAQSPEFKVYQNKVVSNCRALASR  389 (529)
Q Consensus       317 -~GprgG~i~~~~~~~~-~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~-----~~~~~~~~~~~~~i~~~a~~l~~~  389 (529)
                       +|+|.||++++..... .................+.+...+.++.. .+.     ......++++++++.++++.+.+.
T Consensus       250 ~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~  328 (396)
T d2q7wa1         250 LYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVAT-ILSNDALRAIWEQELTDMRQRIQRMRQLFVNT  328 (396)
T ss_dssp             CGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHH-HHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHH
T ss_pred             ccCCCccccccchhHHHHHHHhhhhhhhhhhccccCCCHHHHHHHHH-HhcCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             8999999999874210 00011111111112223333333333222 111     001123466777788889999999


Q ss_pred             HHhcCcE----EecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHH
Q 009673          390 LVELGYK----LVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKE  465 (529)
Q Consensus       390 L~~~G~~----v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d  465 (529)
                      |++.|..    .+.+ ....+.|+.     ++.+.+.++++++||.+    +||        + ||++..     +++++
T Consensus       329 L~~~~~~~~~~~~~~-~~G~F~~~~-----l~~e~~~~L~~e~gV~~----~~g--------~-Ri~~a~-----l~~~~  384 (396)
T d2q7wa1         329 LQEKGANRDFSFIIK-QNGMFSFSG-----LTKEQVLRLREEFGVYA----VAS--------G-RVNVAG-----MTPDN  384 (396)
T ss_dssp             HHHTTCCSCCTHHHH-CCSSEEECC-----CCHHHHHHHHHHHCEEC----CTT--------C-EEEGGG-----CCTTT
T ss_pred             HHHhCCCCCcceecC-CCeEEEeeC-----CCHHHHHHHHHhCCEEE----CCC--------C-EEEecC-----CCHHH
Confidence            9987643    2222 123455543     35677888889999987    443        1 888653     45689


Q ss_pred             HHHHHHHHHHHH
Q 009673          466 FVAIADFIHEGV  477 (529)
Q Consensus       466 ~~~la~~i~~~~  477 (529)
                      +++++++|++++
T Consensus       385 i~~~~~ai~~v~  396 (396)
T d2q7wa1         385 MAPLCEAIVAVL  396 (396)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhC
Confidence            999999998864

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=99.85  E-value=1.7e-20  Score=188.84  Aligned_cols=306  Identities=17%  Similarity=0.133  Sum_probs=196.2

Q ss_pred             cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673          103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P  179 (529)
Q Consensus       103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~  179 (529)
                      +.|.|..+||+  +|+.+.+++...+.......||.    .|.   .++++...+++.. -+++++    +|.+++|+ +
T Consensus        20 d~~~l~~~enp~~~p~~i~~~~~~~~~~~~~~~yp~----~g~---~~Lr~aia~~~~~-~~v~~d----~I~it~G~~~   87 (334)
T d2f8ja1          20 DKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYD----SPD---EELIEKILSYLDT-DFLSKN----NVSVGNGADE   87 (334)
T ss_dssp             CSEECSSCCCSSCCCHHHHHHHHHHCCTTGGGSCCC----SSC---HHHHHHHHHHHTC-SSCCGG----GEEEEEHHHH
T ss_pred             CceEEECCCCCCCCCHHHHHHHHHHhhcchhcCCCC----CCc---HHHHHHHHHHhcc-cCCCcc----eEEecCcchh
Confidence            67888889984  67899999887775433223332    122   3444333333322 134443    57779998 6


Q ss_pred             HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                      ++.++    +++||+|++.+|.|.++.        ..+...|.  ++++++++++....+      ...+ +++++++++
T Consensus        88 ~l~~l----~~~~d~v~i~~P~y~~~~--------~~~~~~g~--~~v~v~~~~~~~~~~------~~~~-~~~~l~l~n  146 (334)
T d2f8ja1          88 IIYVM----MLMFDRSVFFPPTYSCYR--------IFAKAVGA--KFLEVPLTKDLRIPE------VNVG-EGDVVFIPN  146 (334)
T ss_dssp             HHHHH----HHHSSEEEECSSCCHHHH--------HHHHHHTC--CEEECCCCTTSCCCC------CCCC-TTEEEEEES
T ss_pred             HHHHH----hhhccccccccccccccc--------cchhccCC--ccccccccccccccc------cccc-cceEEEecc
Confidence            66544    446799999998775542        12344565  777888875433221      2233 789999999


Q ss_pred             CCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccc--cCCCCeEEEeeCCCcchh
Q 009673          260 SAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGV  334 (529)
Q Consensus       260 s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~  334 (529)
                      |+||+  ..+.+++.+++ ++++++++|++++.. ........... ..-+++.|++|++  +|+|.||+++++      
T Consensus       147 P~NPtG~~~s~~~l~~~~-~~~~~ii~Dd~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~------  218 (334)
T d2f8ja1         147 PNNPTGHVFEREEIERIL-KTGAFVALDEAYYEF-HGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASE------  218 (334)
T ss_dssp             SCTTTCCCCCHHHHHHHH-TTTCEEEEECTTGGG-TCCCCGGGGGTCSSEEEEEESTTTSSCTTTCEEEEEECH------
T ss_pred             cccccceeecHHHhhccc-cceeEEeecccchhh-cccccccccccCceEEEEecCccccchhhhhhhhcccch------
Confidence            99997  67777887765 578999999986432 21111111111 1238889999974  789999999987      


Q ss_pred             HHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCC
Q 009673          335 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM  414 (529)
Q Consensus       335 ~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~  414 (529)
                      ++.+++.......  +.....+.++ .+.+..  ...+.+..+++.++++.+.+.|++.|+++..+.  ..++|+.+.. 
T Consensus       219 ~~i~~l~~~~~~~--~~s~~~~~~a-~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~--g~f~~~~~~~-  290 (334)
T d2f8ja1         219 KFIDAYNRVRLPF--NVSYVSQMFA-KVALDH--REIFEERTKFIVEERERMKSALREMGYRITDSR--GNFVFVFMEK-  290 (334)
T ss_dssp             HHHHHHHHHSCTT--CSCHHHHHHH-HHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHHTCEECCCC--SSEEEEECCH-
T ss_pred             HHHHHHHHhhccc--ccchhhhhhc-cccccc--ccchhhHHHHHHHHHHHHHHHHHHCCCeECCCC--ceEEEEECCC-
Confidence            7777776543322  2222222222 223432  233467788899999999999999999987642  3456666642 


Q ss_pred             CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          415 GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       415 ~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                       .+.+++.+.|.++||.|..          .+++|||++.       +.+|++++.+.|++
T Consensus       291 -~~~~~~~~~L~~~GI~vr~----------~~~~vRis~g-------~~ee~~~l~~~l~~  333 (334)
T d2f8ja1         291 -EEKERLLEHLRTKNVAVRS----------FREGVRITIG-------KREENDMILRELEV  333 (334)
T ss_dssp             -HHHHHHHHHHHHTTEECEE----------ETTEEEEECC-------CHHHHHHHHHHHHH
T ss_pred             -CCHHHHHHHHHHCCCEECC----------CCCeEEEEcC-------CHHHHHHHHHHHhc
Confidence             2567788888899998842          2479999862       36888888887764

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=99.85  E-value=1.4e-20  Score=194.84  Aligned_cols=355  Identities=16%  Similarity=0.150  Sum_probs=207.2

Q ss_pred             cccCChH-HHHHHHHHHHHh-hcceeEecC----CC---CCcHHHHHHHhhhhhcc-CCCCCCCCCCCCCchhHHHHHHH
Q 009673           83 LGEADPE-VCEIITKEKERQ-FKSLELIAS----EN---FTSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETL  152 (529)
Q Consensus        83 l~~~d~~-~~~~~~~e~~~~-~~~i~L~as----en---~~~~~V~eal~~~l~~~-y~~G~p~~r~~~g~~~~d~lE~~  152 (529)
                      +...+|+ ++.++++-++.. .+.|+|..+    ++   ++.+.|++|......+. ..++|..      ..-..++.+.
T Consensus         9 ~~~~~~~~i~~l~~~~~~d~~~~~Inl~iG~~~d~~g~~~~~~~V~~a~~~~~~~~~~~~~Y~p------~~G~p~lrea   82 (412)
T d1ajsa_           9 VPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLP------ILGLAEFRTC   82 (412)
T ss_dssp             CCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCC------TTCCHHHHHH
T ss_pred             CCcCCCChHHHHHHHHhcCCCCCcEEeeCCCCcCCCCCCCCcHHHHHHHHHHHhCCCcCCCCCC------CCCCHHHHHH
Confidence            5555554 566554432211 256999887    22   35688999876554332 2233433      2334466666


Q ss_pred             HHHHHHHHcCCC--CCCCceeeecCChHHHHHHHH-------HhhcCCCCEEEEcCCCCCccccccccccccccccccce
Q 009673          153 CQKRALAAFNLD--ENKWGVNVQPLSGSPANFEVY-------TAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY  223 (529)
Q Consensus       153 a~~~la~~~g~~--~~~~~~~V~~~sGs~A~~~~l-------~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~  223 (529)
                      +++++.+..+.+  .+.+ +.++..+++.++..+.       .++++|||+|++++|.|+++..        .+...|..
T Consensus        83 ia~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~--------~~~~~G~~  153 (412)
T d1ajsa_          83 ASRLALGDDSPALQEKRV-GGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNG--------VFTTAGFK  153 (412)
T ss_dssp             HHHHHHCTTCHHHHTTCE-EEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHH--------HHHHTTCS
T ss_pred             HHHHHhccCCcccccccc-eeecccchhhHHHHHHHHHHHHhhhcCCCCCEEEEeCCcchhhHH--------HHHHcCCe
Confidence            667666555442  2322 2333333334443332       3347999999999998865532        33445542


Q ss_pred             E-EEEEcccCCCCCCCCHHHHHHHhhh--cCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccc
Q 009673          224 F-ESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAA  295 (529)
Q Consensus       224 ~-~~v~~~v~~~~~~iD~d~le~~i~~--~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~  295 (529)
                      . .+.++ .+.+.+.+|++.+++.+..  .+++++++++|+||+  ..   .+++|.++|++||+++++|++ |.++.+.
T Consensus       154 ~v~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~-Y~~l~~~  231 (412)
T d1ajsa_         154 DIRSYRY-WDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSA-YQGFASG  231 (412)
T ss_dssp             CEEEEEC-EETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEES-CTTTTTS
T ss_pred             EEEeecc-cccccccccHHHHHHHHHhccCCcEEEEecCCCCCcCCCCCHHHHHHHHHHHhhCCEEEEecHh-hhhhhcC
Confidence            1 22222 2334567899888776543  267788888999997  33   588999999999999999999 4566554


Q ss_pred             cccCCCC------C--cccEEEecccccc--cCCCCeEEEeeCCCc-chhHHHhhhcccccCCCCCCChHHHHHHHHHHH
Q 009673          296 SVVADPF------K--YCDVVTTTTHKSL--RGPRGGMIFFKKDPV-LGVELESAINNAVFPGLQGGPHNHTIGGLAVCL  364 (529)
Q Consensus       296 ~~~~~~~------~--~aDiv~~S~hK~l--~GprgG~i~~~~~~~-~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al  364 (529)
                      +.....+      .  ...+++.|++|++  +|+|.|+++++.... ....+...+...........+...+.++ +..+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  310 (412)
T d1ajsa_         232 NLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIV-ARTL  310 (412)
T ss_dssp             CHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHH-HHHH
T ss_pred             CcccchhhhhhhhhhcccccccccccccccCCCCCccccccchhHHHHHHHHHHHHHHHhhccccccchHHHHHH-HHHh
Confidence            4221111      0  1237778888875  899999999987421 0001111121111112222222222222 1111


Q ss_pred             H-----HhcCchHHHHHHHHHHHHHHHHHHHHhcCcE----EecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCC
Q 009673          365 K-----HAQSPEFKVYQNKVVSNCRALASRLVELGYK----LVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKN  435 (529)
Q Consensus       365 ~-----~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~----v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~  435 (529)
                      .     .....+++.+.+++.++++.+.+.|++.|..    .+.+ ...++.|+     +++.+++.++++++||.+   
T Consensus       311 ~~~~~~~~~~~~~~~~~~~l~~~r~~l~~~L~~~~~~~~~~~i~~-~~G~F~~~-----~ls~~~v~~L~~e~gV~~---  381 (412)
T d1ajsa_         311 SDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITD-QIGMFSFT-----GLNPKQVEYLINQKHIYL---  381 (412)
T ss_dssp             HSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHH-CCSSEEEC-----CCCHHHHHHHHHTTCEEC---
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeecC-CCeEEEec-----CCCHHHHHHHHHhCCEEE---
Confidence            1     1111234667778888899999999886543    2221 12334443     335677888889999987   


Q ss_pred             CCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          436 SVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       436 ~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                       +||         .||++..     .+++++++++++|+++++.
T Consensus       382 -vpg---------~Ri~~ag-----~~~~~i~~~a~aI~~av~~  410 (412)
T d1ajsa_         382 -LPS---------GRINMCG-----LTTKNLDYVATSIHEAVTK  410 (412)
T ss_dssp             -CTT---------SEEEGGG-----CCTTTHHHHHHHHHHHHHH
T ss_pred             -eCC---------CeEEecc-----CCHHHHHHHHHHHHHHHHh
Confidence             453         2888643     4568999999999999874

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.85  E-value=9e-21  Score=188.52  Aligned_cols=317  Identities=18%  Similarity=0.156  Sum_probs=196.5

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD  193 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD  193 (529)
                      ++|+|++||....        .|...|+..+.+.++|    +++++++|.+.     .+.++||++||.+++.++.++||
T Consensus        12 p~p~v~~A~~~a~--------~g~~~yg~~p~~~~le----~~lA~~~G~~~-----~~~~~sGt~A~~~al~a~~~~g~   74 (343)
T d1m6sa_          12 PTEEMRKAMAQAE--------VGDDVYGEDPTINELE----RLAAETFGKEA-----ALFVPSGTMGNQVSIMAHTQRGD   74 (343)
T ss_dssp             CCHHHHHHHHTCC--------CCCGGGTCCHHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHHHHHHHCCTTC
T ss_pred             CCHHHHHHHHhhh--------cCCcccCCCHHHHHHH----HHHHHHHCCCe-----EEEeCCHHHHHHHHHHHHhccCC
Confidence            5789999996542        1223466678888888    67899999874     35568999999999999999999


Q ss_pred             EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCcEEEEc-CCCCCC--C
Q 009673          194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAG-ASAYPR--D  265 (529)
Q Consensus       194 ~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-----~pklIi~~-~s~~p~--~  265 (529)
                      .+++..+.+..+.....     .....+.  ....++  .+.+..|++.+++.+...     ++..+++. ..++++  .
T Consensus        75 ~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (343)
T d1m6sa_          75 EVILEADSHIFWYEVGA-----MAVLSGV--MPHPVP--GKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRV  145 (343)
T ss_dssp             EEEEETTCHHHHSSTTH-----HHHHTCC--EEEEEC--EETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBC
T ss_pred             ceeccccccceeeeccc-----ccccccc--eeeccc--cccCccCHHHHHHhhhhhhcccccccccccccccccCCcee
Confidence            99998876543321110     1111122  333333  235678999999988752     12333333 344443  3


Q ss_pred             C---CHHHHHHHHHHhCCEEEEecccccccccccccCC--CCCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhh
Q 009673          266 F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAI  340 (529)
Q Consensus       266 ~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i  340 (529)
                      .   ++++|+++|+++|+++++|++|..+.........  .....+..+++.+|...|..+|++....      ++....
T Consensus       146 ~~~~~l~~i~~~~~~~g~~~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~------~~~~~~  219 (343)
T d1m6sa_         146 VPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDR------DFIERA  219 (343)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECH------HHHHHH
T ss_pred             cCHHHHHHHHHHHHhcCeEEEeccccccccccccccchhhhccccccccccccccccccccccccccH------HHHhhh
Confidence            3   5667888889999999999987654332211110  0013457777778878888888877776      333332


Q ss_pred             cccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHH
Q 009673          341 NNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGAR  420 (529)
Q Consensus       341 ~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~  420 (529)
                      .........+.+.....++..........    .+.++..++...+.+.+.+.+.........++++++++...+.++.+
T Consensus       220 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~  295 (343)
T d1m6sa_         220 RKARKMLGGGMRQAGVLAAAGIIALTKMV----DRLKEDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLKVNAHG  295 (343)
T ss_dssp             HHHHHHHTCCCSSTHHHHHHHHHHHHHSS----TTHHHHHHHHHHHHHHHHHHTCBCCGGGCCSSEEEEECTTSSSCHHH
T ss_pred             HhhCcccccccchhHHHHHhhhhhhhhhH----HHHHHHHHHHHHhhhHHHHhccCccCCCCCceEEEEEeCCCcccHHH
Confidence            21110001111112222222222221111    22344556666777777664433333224567788888766777888


Q ss_pred             HHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       421 ~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +.+.|.+.||.++.         ..+..+||.++.    ++++||++++++.|+++++.
T Consensus       296 l~~~L~~~Gi~v~~---------~~~~~iRi~~~~----~~t~edid~~v~~l~~v~~~  341 (343)
T d1m6sa_         296 FIEALRNSGVLANA---------VSDTEIRLVTHK----DVSRNDIEEALNIFEKLFRK  341 (343)
T ss_dssp             HHHHHHHHTEECEE---------EETTEEEEECCT----TSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCEEec---------CCCCEEEEECCC----CCCHHHHHHHHHHHHHHHHH
Confidence            99999999999853         235689997653    46799999999999998874

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.83  E-value=4.6e-20  Score=192.07  Aligned_cols=302  Identities=15%  Similarity=0.141  Sum_probs=195.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cCCCCEEEEcCCCCCccccccccccccccccccce
Q 009673          146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY  223 (529)
Q Consensus       146 ~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~  223 (529)
                      ...+|.....++.+++|.+..   ..+..++|+.++.+++++.  ..++++|+++...|.+.+        +.+...|..
T Consensus       111 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~t~~~~~~~l~a~r~~~~~~~vi~s~~~H~s~~--------k~~~~~g~~  179 (434)
T d2z67a1         111 MYALTNKILESFFKQLGLNVH---AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPI--------KAVSFVGMN  179 (434)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCE---EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH--------HHHHHTTCE
T ss_pred             HHHHHHHHHHHHHHhcCCCcc---eeecCcHHHHHHHHHHHHHHHhhcCceEEEeccCCHHHH--------HHHHHhCCc
Confidence            345665566788899999864   2344445557777777776  348899999987765432        244556653


Q ss_pred             EEEEEcccCCCCCCCCHHHHHHHhhhc----CCcEEEEcCCCCC-C-CCCHHHHHHHHHHhCCEEEEecccccccccccc
Q 009673          224 FESMPYRLDESTGLVDYDMLEKTAILF----RPKLIIAGASAYP-R-DFDYPRMRQIADAVGALLMMDMAHISGLVAASV  297 (529)
Q Consensus       224 ~~~v~~~v~~~~~~iD~d~le~~i~~~----~pklIi~~~s~~p-~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~  297 (529)
                      ...+....+.+++.+|+++|++.++++    ++.+|++..+++. + ..|+++|+++|++||+++++|+||..+......
T Consensus       180 ~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~v~~~~~~~~~g~~~~l~~i~~~~~~~~~~l~vD~a~g~~~~~~~~  259 (434)
T d2z67a1         180 MRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLE  259 (434)
T ss_dssp             EEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHH
T ss_pred             ceEEEeecCCCccCCCHHHHHHHHHhhhhcCCceEEEeccCcCCCccccCHHHHHHHHHHhCCeEEEeccchhhhhhccc
Confidence            333332234456789999999999753    4566777776653 3 678999999999999999999998655432211


Q ss_pred             c-CCCCC-cccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673          298 V-ADPFK-YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV  374 (529)
Q Consensus       298 ~-~~~~~-~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~  374 (529)
                      . ..+.. ++|++++|+||++.+|.| |+++.+++     ++.+++... .++...+  . ....+++++..+...++.+
T Consensus       260 ~~~~~~~~~~D~~~~s~hK~l~~~~g~~~~~~~~~-----~~~~~~~~~-~~~~~~~--~-~~~~~~a~l~~~~~~g~~~  330 (434)
T d2z67a1         260 KLKKAFKYRVDAVVSSSDKNLLTPIGGGLVYSTDA-----EFIKEISLS-YPGRASA--T-PVVNTLVSLLSMGSKNYLE  330 (434)
T ss_dssp             HHHHHHTSCCSEEEEEHHHHHCCCSSCEEEEESCH-----HHHHHHHTT-SCSCBCS--H-HHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccCCcceEEEcCccccccCCCccccccCcH-----HHHHHHHhh-ccccccc--c-hHHHHHHHHHHHHHhcchh
Confidence            1 11122 689999999999988888 67766664     666666544 2332222  1 2222233444444456778


Q ss_pred             HHHHHHHHHHHHHHHHHh----cCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCC----C--CCC
Q 009673          375 YQNKVVSNCRALASRLVE----LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD----K--SAL  444 (529)
Q Consensus       375 ~~~~i~~~a~~l~~~L~~----~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~----~--~~~  444 (529)
                      ..++..++++++.+.|++    .|+.+..... ...+.+.+   ..+...+...|.+.||.......|..    .  ...
T Consensus       331 ~~~~~~~~a~~l~~~L~~l~~~~g~~ll~~~~-~~~~~~~~---~~~~~~l~~~L~~~gI~g~~v~~~l~~~g~~~~~~~  406 (434)
T d2z67a1         331 LVKNQKNSKKLLDELLNDLSKKTGGKFLDVES-PIASCISV---NSDPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTY  406 (434)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSSCCBCCCCC-SSEEEEEC---SSCHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhcCceecCCCC-Cceeeeec---CCCHHHHHHHHHHcCCeeeehhhhccccCeeeeccc
Confidence            888889999999888876    4676665321 12222222   23567788888899986432211111    1  112


Q ss_pred             CCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          445 VPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       445 ~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      ...++|+...    .+.|++|++++++.|++
T Consensus       407 ~~~~l~~~~s----~~~T~edID~~i~~L~k  433 (434)
T d2z67a1         407 THDYIVMNAA----IGVRTEDIVNSVSKLEK  433 (434)
T ss_dssp             SCCEEEEECC----TTCCHHHHHHHHHHHHT
T ss_pred             CCCeEEEecC----CCCCHHHHHHHHHHHhc
Confidence            2467998754    35679999999999875

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=99.83  E-value=3e-20  Score=192.36  Aligned_cols=353  Identities=13%  Similarity=0.146  Sum_probs=207.8

Q ss_pred             cccCChH-HHHHHHHHHHHh--hcceeEecC----CC---CCcHHHHHHHhhhhhcc-CCCCCCCCCCCCCchhHHHHHH
Q 009673           83 LGEADPE-VCEIITKEKERQ--FKSLELIAS----EN---FTSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELET  151 (529)
Q Consensus        83 l~~~d~~-~~~~~~~e~~~~--~~~i~L~as----en---~~~~~V~eal~~~l~~~-y~~G~p~~r~~~g~~~~d~lE~  151 (529)
                      +...+++ ++.+.++ .+..  .+.|+|..+    ++   ++.+.|++|......+. ...+|+.      .+-..++.+
T Consensus         8 ~~~~~~d~i~~~~~~-~~~d~~~~kInL~iG~~~d~~g~~~~~~~V~~A~~~l~~~~~~~~~Y~p------~~G~~~lr~   80 (412)
T d1yaaa_           8 IELLPPDALFGIKQR-YGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLG------ITGLPSLTS   80 (412)
T ss_dssp             CCCCCCCTTHHHHHH-HHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCC------TTCCHHHHH
T ss_pred             CCcCCCChHHHHHHH-HhcCCCCCcEEeecCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCC------CCCCHHHHH
Confidence            5555554 4554433 2222  245999875    33   34689998876544322 2334433      222346666


Q ss_pred             HHHHHHHHHcCCCC-CCCceeeecCChH-HHHH--HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEE
Q 009673          152 LCQKRALAAFNLDE-NKWGVNVQPLSGS-PANF--EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESM  227 (529)
Q Consensus       152 ~a~~~la~~~g~~~-~~~~~~V~~~sGs-~A~~--~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v  227 (529)
                      .+.+++.+..+... ++. +.+..++|+ .+..  ..+..++.|||+|++++|.+..+..        .+...|.  +++
T Consensus        81 aia~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~gd~Vlip~P~~~~y~~--------~~~~~g~--~~~  149 (412)
T d1yaaa_          81 NAAKIIFGTQSDALQEDR-VISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMA--------IFENQGL--KTA  149 (412)
T ss_dssp             HHHHHHHCTTCHHHHTTC-EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHH--------HHHTTTC--CEE
T ss_pred             HHHHHHhcccCccccccc-eeEEecccchhHHHHHHHHHhccCCCCEEecccccCchhHH--------HHHHcCC--cee
Confidence            66666665555321 111 112222333 3332  2344568899999999998765532        2344565  444


Q ss_pred             EcccC-CCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          228 PYRLD-ESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       228 ~~~v~-~~~~~iD~d~le~~i~~~--~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .+++. .+++.+|.+.+++.+...  +++++++++|+||+  ..   .+++|.++|+++++++++|++ |.++.+.+...
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~P~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~-Y~~l~~~~~~~  228 (412)
T d1yaaa_         150 TYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTA-YQGFATGDLDK  228 (412)
T ss_dssp             EEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEES-CTTTSSSCHHH
T ss_pred             cccccccccccccchhhhcccccCCCceEEEEecCCCCCccccCCHHHHHHHHhhhccCCEEEeecce-eeecccCCccc
Confidence            44442 245788999888877652  34578888999997  33   488999999999999999999 56776654221


Q ss_pred             CCC---------C--cccEEEecccccc--cCCCCeEEEeeCCCc-chhHHHhhhc----ccccCCCCCCChHHHHHHHH
Q 009673          300 DPF---------K--YCDVVTTTTHKSL--RGPRGGMIFFKKDPV-LGVELESAIN----NAVFPGLQGGPHNHTIGGLA  361 (529)
Q Consensus       300 ~~~---------~--~aDiv~~S~hK~l--~GprgG~i~~~~~~~-~~~~l~~~i~----~~~~p~~~g~p~~~~iaala  361 (529)
                      .+.         .  .--+++.|++|.+  +|+|.||++++.+.. ...+..+.+.    ........+.+...+.++..
T Consensus       229 ~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~  308 (412)
T d1yaaa_         229 DAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAK  308 (412)
T ss_dssp             HTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHH
T ss_pred             chhhhhhhhhccccCCCeEEEEecCCccccCcCceEEEEEchhhhhhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Confidence            111         1  1127889999975  899999999987531 1111111111    11111222333333333222


Q ss_pred             HHHH-----HhcCchHHHHHHHHHHHHHHHHHHHHhcCcE----EecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEE
Q 009673          362 VCLK-----HAQSPEFKVYQNKVVSNCRALASRLVELGYK----LVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITL  432 (529)
Q Consensus       362 ~al~-----~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~----v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v  432 (529)
                       .+.     ......++.+++.+.++++.+.+.|++.|..    .+.+ ....+.|+     +++.+.++++++++||.+
T Consensus       309 -~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~~~-~gG~F~~~-----~ls~e~~~~L~~e~~V~~  381 (412)
T d1yaaa_         309 -LLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVN-QCGMFSFT-----GLTPQMVKRLEETHAVYL  381 (412)
T ss_dssp             -HHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHH-CCSSEEEC-----CCCHHHHHHHHHHHCEEC
T ss_pred             -HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceeCC-CceEEEec-----CcCHHHHHHHHHhCCEEE
Confidence             221     1111234677788888999999999886532    2222 12344453     335677888889999987


Q ss_pred             cCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          433 NKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       433 ~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                          +||         .||++..     ++++.+++++++|+++++.
T Consensus       382 ----~~g---------~Ris~~g-----~~~~~i~~l~~ai~~v~k~  410 (412)
T d1yaaa_         382 ----VAS---------GRASIAG-----LNQGNVEYVAKAIDEVVRF  410 (412)
T ss_dssp             ----CTT---------SEEEGGG-----CCTTTHHHHHHHHHHHHHH
T ss_pred             ----CCC---------CEEEecc-----CCHHHHHHHHHHHHHHHHh
Confidence                332         4888643     4468999999999998863

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=6.4e-20  Score=191.51  Aligned_cols=314  Identities=7%  Similarity=0.016  Sum_probs=195.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhh---cCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       146 ~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~al---l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      ..++|....+++++++|.+...-  -+.++.|+ .++.+++.++   ..+++.|+++...|.+..        +.+.+.|
T Consensus        92 ~~~le~~~~~~~~~l~g~~~~~~--~~~~~~~t~~~~~~~l~a~~~~~~~~~~vi~~~~~H~s~~--------~a~~~~g  161 (445)
T d3bc8a1          92 LNKITNSLVLNVIKLAGVHSVAS--CFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCF--------KSMVTAG  161 (445)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTCCE--EEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHH--------HHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhCCCcccC--ccccccchHHHHHHHHHHHHHhCCCCCEEEEcCcccHHHH--------HHHHHcC
Confidence            45788878899999999986432  23345555 4555555554   467899999887765442        3456667


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhc---CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccccccc
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAAS  296 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~---~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~  296 (529)
                      .....+....+.+++.+|+++|++++++.   ++.+|++..++++.  ..|+++|+++|+++|++|++|+||..++.+..
T Consensus       162 ~~~~~v~~~~~~~~~~id~~~l~~~i~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~  241 (445)
T d3bc8a1         162 FEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCM  241 (445)
T ss_dssp             CEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHH
T ss_pred             CeeEEEEeeccCcccccCHHHHHHHHHhccccCeEEEEEeCCCCCCeeehhHHHHHHHHHHhCCcEEEEccchhhhhhcc
Confidence            64333332233356899999999999753   45677777666543  78999999999999999999999876654322


Q ss_pred             ccC---CCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchH
Q 009673          297 VVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF  372 (529)
Q Consensus       297 ~~~---~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~  372 (529)
                      ...   ..+.++|++++|+||++.+|.| |+++.++.     ++.+++.........+++.....    .++..+...++
T Consensus       242 ~~~~~~~~~~~vd~~~~s~hK~~~~p~g~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~  312 (445)
T d3bc8a1         242 HLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNE-----PFIQDISKMYPGRASASPSLDVL----ITLLSLGCSGY  312 (445)
T ss_dssp             HHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCH-----HHHHHHHHHSCSCBCSHHHHHHH----HHHHHHHHHHH
T ss_pred             ccchhccCcCCcceEEecCccccccCCCCceeeeCCh-----HHHHHHHHHHhhcccCcchHHHH----HHHHHHhhhcc
Confidence            111   0122589999999999988888 66667663     55565554322222223233233    23333333456


Q ss_pred             HHHHHHHHHHHHHHHHHHHh----cCcEEecCCCCCceEEEccCC----CCCcHHHHHHhHhcCCeEEcCCCCCC-----
Q 009673          373 KVYQNKVVSNCRALASRLVE----LGYKLVSGGSDNHLVLVDLRP----MGIDGARVEKILDMASITLNKNSVPG-----  439 (529)
Q Consensus       373 ~~~~~~i~~~a~~l~~~L~~----~G~~v~~~gt~~~~~~v~~~~----~~i~~~~~~~~L~~~GI~v~~~~~Pg-----  439 (529)
                      ....++...+++++.+.|.+    .|..+...........+.+..    .+.+..++...|.+.||.......++     
T Consensus       313 ~~~~~~~~~~~~~~~~~L~~l~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~gI~~~~~~~~~~~~~i  392 (445)
T d3bc8a1         313 RKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTV  392 (445)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHHHHTTCCSCEEECSCCEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhcCceeecCCCCCcceEEEeeeccccCCCCHHHHHHHHHHcCCCcceeeccccccch
Confidence            67777778888888888765    355554321122222333221    12344556666777776422111111     


Q ss_pred             ---------CC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHH
Q 009673          440 ---------DK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLE  482 (529)
Q Consensus       440 ---------~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~  482 (529)
                               .. ......++|++..    .+++++|++++++.|+++++...+
T Consensus       393 ~~~~~~~~g~~~~~~~~~~i~i~~~----~~~T~eDID~~v~~L~kilk~~rk  441 (445)
T d3bc8a1         393 SGHTFRGFMSHADNYPCAYLNAAAA----IGMKMQDVDLFIKRLDKCLNIVRK  441 (445)
T ss_dssp             TTEEEETTTTTSSCCSSCEEEEECC----TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhcCCCCccCCCCeEEEeCc----CCCCHHHHHHHHHHHHHHHHHHHh
Confidence                     00 1122356888754    356799999999999999987754

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.83  E-value=4.9e-20  Score=189.39  Aligned_cols=351  Identities=16%  Similarity=0.184  Sum_probs=207.4

Q ss_pred             cccCChH-HHHHHHHHHHHh-hcceeEecC----CC---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHH
Q 009673           83 LGEADPE-VCEIITKEKERQ-FKSLELIAS----EN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC  153 (529)
Q Consensus        83 l~~~d~~-~~~~~~~e~~~~-~~~i~L~as----en---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a  153 (529)
                      |+..+++ ++.+++.-+... .+.|+|..+    ++   ++++.|++|+...+.+..+.+|..   ..|   ..++.+.+
T Consensus         5 ~~~~~~d~i~~l~~~~~~d~~~~~InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~~~~~Y~p---~~G---~~~lr~ai   78 (394)
T d2ay1a_           5 LKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAG---LSG---EPEFQKAM   78 (394)
T ss_dssp             CCCCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCC---SSC---CHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHhCCCCCCCEEccCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCC---CCC---CHHHHHHH
Confidence            4444444 566654432211 246999876    22   456899999987776554445543   223   34666666


Q ss_pred             HHHHHHHcCCCCCCCceeeecCChHHH--HHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673          154 QKRALAAFNLDENKWGVNVQPLSGSPA--NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL  231 (529)
Q Consensus       154 ~~~la~~~g~~~~~~~~~V~~~sGs~A--~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v  231 (529)
                      .+++.+..+.... . ..+++++|+.+  +.+.+..+++|||+|++++|.++.+..        .+...|.  +++.++.
T Consensus        79 a~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~~~~~~~~~gd~V~~p~p~~~~y~~--------~~~~~g~--~~v~~~~  146 (394)
T d2ay1a_          79 GELILGDGLKSET-T-ATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVS--------IMNFMGL--PVQTYRY  146 (394)
T ss_dssp             HHHHHGGGCCGGG-E-EEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHH--------HHHHHTC--CEEEEEC
T ss_pred             HHHHhcccccccc-c-cceeccCchHHHHHHHHHhhhcCCceEEEEecccccchHH--------HHHHcCC--EEEEecc
Confidence            6776665555432 1 34555565533  445556778999999999997765432        2344555  5555554


Q ss_pred             CC-CCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC-
Q 009673          232 DE-STGLVDYDMLEKTAILF--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-  302 (529)
Q Consensus       232 ~~-~~~~iD~d~le~~i~~~--~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-  302 (529)
                      .. +++..+.+++++.....  +++++++++++||+  ..   .+++|.++|++|++++++|++ |.++.+.+....+. 
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~-Y~~l~~~~~~~~~~~  225 (394)
T d2ay1a_         147 FDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLA-YQGFGDGLEEDAAGT  225 (394)
T ss_dssp             EETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEEC-CTTSSSCHHHHHHHH
T ss_pred             cchhcccccchhHHHHHhhcccCcEEEEeCCCCCCCCCCCCHHHHHHHHHHhhcceEEEEEecc-chhhcccccccchhh
Confidence            32 34667777776665432  45677778899997  33   588899999999999999999 56766543221111 


Q ss_pred             -----Ccc-cEEEecccccc--cCCCCeEEEeeCCCcc-hhHHHhhhcccccCCCCCCChHHH-HHHHHHH---HHHhcC
Q 009673          303 -----KYC-DVVTTTTHKSL--RGPRGGMIFFKKDPVL-GVELESAINNAVFPGLQGGPHNHT-IGGLAVC---LKHAQS  369 (529)
Q Consensus       303 -----~~a-Div~~S~hK~l--~GprgG~i~~~~~~~~-~~~l~~~i~~~~~p~~~g~p~~~~-iaala~a---l~~~~~  369 (529)
                           ... -+++.|++|++  +|+|.|++.++..... ...+...+...........+...+ +++....   +.....
T Consensus       226 ~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  305 (394)
T d2ay1a_         226 RLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWM  305 (394)
T ss_dssp             HHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHH
T ss_pred             hhhhhhcccccccccccccccCCcccccchhhchhHHHHHHHhhhhhHhhhcccccchhHHHHHHHHHhcCCHHHHHHHH
Confidence                 011 26667888875  7999999999874210 001111111111111122222222 1111111   111112


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCC
Q 009673          370 PEFKVYQNKVVSNCRALASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALV  445 (529)
Q Consensus       370 ~~~~~~~~~i~~~a~~l~~~L~~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~  445 (529)
                      ..++.+++++.++++.+.+.|++.|    +..+.+ ....+.|+.+     +.+.++++++++||.+    +||      
T Consensus       306 ~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~-~~G~F~~~~l-----s~~~~~~L~~~~~V~~----~~g------  369 (394)
T d2ay1a_         306 AELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAE-HRGMFSRLGA-----TPEQVKRIKEEFGIYM----VGD------  369 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHH-CCSSEEECCC-----CHHHHHHHHHHHCEEC----CTT------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCceeeECC-CceeEEecCc-----CHHHHHHHHHhCCEEe----cCC------
Confidence            3346677888888999999998743    222222 1234555433     5677888889999987    332      


Q ss_pred             CCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          446 PGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       446 ~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                         .||++..     ++++++++++++|+++
T Consensus       370 ---~Ri~~a~-----l~~~~i~~l~~ai~~v  392 (394)
T d2ay1a_         370 ---SRINIAG-----LNDNTIPILARAIIEV  392 (394)
T ss_dssp             ---CEEEGGG-----CCTTTHHHHHHHHHHH
T ss_pred             ---CEEEecC-----CCHHHHHHHHHHHHHh
Confidence               4998753     5578999999999875

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=99.82  E-value=4e-19  Score=181.22  Aligned_cols=323  Identities=14%  Similarity=0.075  Sum_probs=211.7

Q ss_pred             CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-
Q 009673          110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-  188 (529)
Q Consensus       110 sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-  188 (529)
                      +++.+..+-++++...+.+.+         +...++++++|    +.+++++|.++     .|.++|||.|+.+++.++ 
T Consensus         6 ~~p~~~~~~~~~v~~~l~~~~---------~~~G~~v~~fE----~~~~~~~g~k~-----ai~~~Sgt~Al~~al~al~   67 (371)
T d2fnua1           6 SEPCLDKEDKKAVLEVLNSKQ---------LTQGKRSLLFE----EALCEFLGVKH-----ALVFNSATSALLTLYRNFS   67 (371)
T ss_dssp             CCCCCCHHHHHHHHHHHTSSC---------CSSSHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHSS
T ss_pred             CCCCCCHHHHHHHHHHHcCCC---------ccCCHHHHHHH----HHHHHHHCcCe-----EEEEecHHHHHHHHHHHhc
Confidence            445566777778777775443         22236788998    67899999987     266799999999999998 


Q ss_pred             cCCCC--EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCC
Q 009673          189 LKPHD--RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDF  266 (529)
Q Consensus       189 l~pGD--~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~  266 (529)
                      +.+||  +|++++.++.+..        .++...|.  +++.+++++++ .++.+++++.+++ ++++|++. +.++...
T Consensus        68 ~~~~~~~eVi~p~~t~~a~~--------~ai~~~G~--~pv~vDi~~~~-~~~~~~~~~~~~~-~t~avi~v-h~~G~~~  134 (371)
T d2fnua1          68 EFSADRNEIITTPISFVATA--------NMLLESGY--TPVFAGIKNDG-NIDELALEKLINE-RTKAIVSV-DYAGKSV  134 (371)
T ss_dssp             CCCTTSCEEEECSSSCTHHH--------HHHHHTTC--EEEECCBCTTS-SBCGGGSGGGCCT-TEEEEEEE-CGGGCCC
T ss_pred             ccCCCCCeeecccccccccc--------eeeeccCc--ccccccccccc-cccchhhhhhccc-hhhccccc-ccccccc
Confidence            55555  8999887654432        13445665  89999998665 4566888888877 88988775 4455678


Q ss_pred             CHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecc--cccccCCCCeEEEeeCCCcchhHHHhhhcccc
Q 009673          267 DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTT--HKSLRGPRGGMIFFKKDPVLGVELESAINNAV  344 (529)
Q Consensus       267 d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~--hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~  344 (529)
                      |+++|.++|+++|++||.|+||+.|....+.....  ..|+.++|+  .|.+++..||+++++++     ++.+++....
T Consensus       135 ~~~~i~~~~~~~~i~lIEDaaqa~Ga~~~~~~~G~--~g~~~~~Sf~~~K~l~~g~GG~i~t~~~-----~~~~~~~~~~  207 (371)
T d2fnua1         135 EVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGG--FALASVFSFHAIKPITTAEGGAVVTNDS-----ELHEKMKLFR  207 (371)
T ss_dssp             CHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTS--SSSEEEEECCTTSSSCCSSCEEEEESCH-----HHHHHHHHHT
T ss_pred             ccccccccccccchhhccchhhccCceeccccCCc--cccccccccccccccccccceEEEeech-----hhhhhccccc
Confidence            99999999999999999999999987655433322  345555555  59998888999999985     5555543211


Q ss_pred             c---------------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecC--C--CCC
Q 009673          345 F---------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG--G--SDN  404 (529)
Q Consensus       345 ~---------------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~--g--t~~  404 (529)
                      .               .|...-  +..+.| +.++.++.  .+++..++..++++.+.+.|.+. ++.+..+  +  ...
T Consensus       208 ~~g~~~~~~~~~~~~~~G~n~r--~sel~A-aigl~qL~--~l~~~~~~R~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~  282 (371)
T d2fnua1         208 SHGMLKKDFFEGEVKSIGHNFR--LNEIQS-ALGLSQLK--KAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSN  282 (371)
T ss_dssp             BTTEEESSSSCEEESSCCCBCC--CCHHHH-HHHHHHHT--THHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCC
T ss_pred             cccccccccccccccccccccc--ccchhh-hhhhhhhh--hccchhhhhhhhhhhhccccccccccccccccccccccc
Confidence            1               111111  112222 12344443  45677777788888888888773 4554431  1  122


Q ss_pred             ceEEEccCC-CCCcHHHHHHhHhcCCeEEcCCCCCCCC----------CCC------CCCeEEEccCCCccCCCCHHHHH
Q 009673          405 HLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDK----------SAL------VPGGIRIGSPAMTTRGFSEKEFV  467 (529)
Q Consensus       405 ~~~~v~~~~-~~i~~~~~~~~L~~~GI~v~~~~~Pg~~----------~~~------~~~~iRig~~~~tt~g~~~~d~~  467 (529)
                      +.+.+-+.. ...+.+++.+.|.+.||.++..+.|-+.          ..+      ....|.|.+.    .+++++|++
T Consensus       283 ~~~~i~~~~~~~~~r~~~~~~L~~~gI~~~~~y~pl~~~~~~~~~~~~~~~pnae~~~~~~l~LP~~----~~lt~~di~  358 (371)
T d2fnua1         283 HLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCH----ANLNLESVQ  358 (371)
T ss_dssp             SCEEEEECGGGGGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCC----TTCCHHHHH
T ss_pred             ccccccccccchhHHHHHHHHHHHCCCCcceeCcccccCHHHHhccccCCCHHHHHHHhCeEECcCC----CCCCHHHHH
Confidence            222222221 1123467889999999998776544221          000      0123555332    358899999


Q ss_pred             HHHHHHHHHHHH
Q 009673          468 AIADFIHEGVEI  479 (529)
Q Consensus       468 ~la~~i~~~~~~  479 (529)
                      ++++.|.+.++.
T Consensus       359 ~I~~~i~~~~~~  370 (371)
T d2fnua1         359 NIAHSVLKTFES  370 (371)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc
Confidence            999999988764

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=8.9e-21  Score=195.37  Aligned_cols=331  Identities=15%  Similarity=0.124  Sum_probs=193.9

Q ss_pred             cceeEecC----CC---CCcHHHHHHHhhhhhccC-CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC--CCCCceee
Q 009673          103 KSLELIAS----EN---FTSRAVMEAVGSCLTNKY-SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNV  172 (529)
Q Consensus       103 ~~i~L~as----en---~~~~~V~eal~~~l~~~y-~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~--~~~~~~~V  172 (529)
                      +.|+|..+    ++   ++.+.|++|......+.- ..+      |+...-..++.+.+.+++.+..+..  .+.  +.+
T Consensus        27 ~kInL~iG~~~d~~g~~p~~~~V~~A~~~l~~~~~~~~~------Y~p~~G~~~lR~aia~~~~~~~~~~~~~~~--i~~   98 (397)
T d3tata_          27 DKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASL------YLPMEGLNCYRHAIAPLLFGADHPVLKQQR--VAT   98 (397)
T ss_dssp             SCEECSCCSCCCTTSSCCCCHHHHHHHHHHTTSCCSSBC------CCCTTCCHHHHHHHHHHHTCSSCHHHHTTC--EEE
T ss_pred             CcEEccCCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCC------CCCcccCHHHHHHHHHHHhhccCCcCCcCc--EEE
Confidence            45899876    22   346899999764433221 112      3333334567766666666555543  222  112


Q ss_pred             ecC-ChH--HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhh
Q 009673          173 QPL-SGS--PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAI  248 (529)
Q Consensus       173 ~~~-sGs--~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~  248 (529)
                      ..+ +++  .++.+++.++++|||+|++++|.+.++..        .+...|.  ++++++++.+ ++.+|.+++.+.+.
T Consensus        99 ~~~~~~~~~~~l~~~~~~~~~pgd~Vlv~~P~y~~y~~--------~~~~~G~--~~~~v~~~~~~~~~~~~~~~~~~~~  168 (397)
T d3tata_          99 IQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVA--------IFAGAGF--EVSTYPWYDEATNGVRFNDLLATLK  168 (397)
T ss_dssp             CCBSHHHHHHHHHHHHHHHHCSSCCCEECSSCCTTHHH--------HHHTTTC--CCEECCCCCTTTSSCCHHHHHHHHT
T ss_pred             ecCchhHHHHHHHHHHhhhcCCCCcceecccCccccHH--------HHHHcCC--EEEEEecchhhccccchHHHHHHhh
Confidence            112 222  24555666778999999999998876542        3345565  6677777544 46789888877765


Q ss_pred             hc--CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccccc-CCCC----C-c-ccEEEecccc
Q 009673          249 LF--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPF----K-Y-CDVVTTTTHK  314 (529)
Q Consensus       249 ~~--~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~~~----~-~-aDiv~~S~hK  314 (529)
                      ..  +++++++++++||+  ..   .+++|.++|+++++++++|++ |.++.+.+.. ....    . + --+++.|++|
T Consensus       169 ~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~-Y~~l~~~~~~~~~~~~~~~~~~~~~i~~~s~SK  247 (397)
T d3tata_         169 TLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIA-YQGFGAGMEEDAYAIRAIASAGLPALVSNSFSK  247 (397)
T ss_dssp             TCCSSCCCEECSSSCSSSCCCCCHHHHHHHHHHHHHTTCCCEECBS-CTTSSSCHHHHHHHHHHHHTTTCCCEECBCCHH
T ss_pred             hcccccEEEEecCCCCCCCeeCCHHHHHHHHHHHhhcCeeEEeehh-hhhhccCCcccchhhhhhhhcCCceEEEecCcc
Confidence            32  56788888999997  33   577899999999999999998 5666654311 1111    0 1 1278899999


Q ss_pred             cc--cCCCCeEEEeeCCCcc-hhHHHhhhcccccCCCCCCChHHHHHHHHHHHHH--h---cCchHHHHHHHHHHHHHHH
Q 009673          315 SL--RGPRGGMIFFKKDPVL-GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH--A---QSPEFKVYQNKVVSNCRAL  386 (529)
Q Consensus       315 ~l--~GprgG~i~~~~~~~~-~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~--~---~~~~~~~~~~~i~~~a~~l  386 (529)
                      ++  +|+|.||++++..... ...+...............+...+.++. ..+..  .   .....+.+.+++.++++.+
T Consensus       248 ~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l  326 (397)
T d3tata_         248 IFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVA-AVLNDEALKASWLAEVEEMRTRILAMRQEL  326 (397)
T ss_dssp             HHTBTTTCCBCCEEECSSTTHHHHHHHHHHHHTTTTTSSCCSHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCccccccccchhHHHHHHHHHHHHHHHhhcccccccHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            74  7999999999875311 1111222222222222333443333222 12210  0   0112234445555566666


Q ss_pred             HHHHHhcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCC
Q 009673          387 ASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS  462 (529)
Q Consensus       387 ~~~L~~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~  462 (529)
                      .+.|.+.+    +..+.+. ...+.|+.     ++.+.++++++++||.+    +||         .||++..     ++
T Consensus       327 ~~~L~~~~~~~~~~~~~~~-~G~F~~~~-----ls~e~~~~L~~e~~V~l----~~g---------~Ri~~a~-----~~  382 (397)
T d3tata_         327 VKVLSTEMPERNFDYLLNQ-RGMFSYTG-----LSAAQVDRLREEFGVYL----IAS---------GRMCVAG-----LN  382 (397)
T ss_dssp             HHTTTTTCTTSCTTHHHHC-CSSBCCCC-----CCHHHHHHHTTTTCEEC----CSS---------SCCBTTS-----CC
T ss_pred             HHHHHHhCCCCceEEEcCC-CceEEecC-----cCHHHHHHHHHhCCEEe----CCC---------CEEEecc-----CC
Confidence            66665532    3322221 22344433     35677888889999987    343         3888754     45


Q ss_pred             HHHHHHHHHHHHHHH
Q 009673          463 EKEFVAIADFIHEGV  477 (529)
Q Consensus       463 ~~d~~~la~~i~~~~  477 (529)
                      ++++++++++|++++
T Consensus       383 ~~~i~~~~~ai~~v~  397 (397)
T d3tata_         383 TANVQRVAKAFAAVM  397 (397)
T ss_dssp             TTTHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhC
Confidence            689999999998763

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.82  E-value=1.7e-18  Score=171.47  Aligned_cols=320  Identities=13%  Similarity=0.044  Sum_probs=190.0

Q ss_pred             ecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHH
Q 009673          108 IASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY  185 (529)
Q Consensus       108 ~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l  185 (529)
                      .+|+|+  ++|+|++|+...... +..|      |+..+..++    ++++++++||.+.+    .+.++|||+||..++
T Consensus         7 f~s~n~~g~~P~v~~A~~~a~~~-~~~~------~~~~~~~~~----l~~~la~~~g~~~~----v~f~~sGt~An~~a~   71 (345)
T d1v72a1           7 FSSDNIAGASPEVAQALVKHSSG-QAGP------YGTDELTAQ----VKRKFCEIFERDVE----VFLVPTGTAANALCL   71 (345)
T ss_dssp             CSCGGGCCCCHHHHHHHHHTTSS-CCCS------TTCSHHHHH----HHHHHHHHHTSCCE----EEEESCHHHHHHHHH
T ss_pred             cCCCCCCCCCHHHHHHHHHHhcc-Cccc------cCCCHHHHH----HHHHHHHHHCCCcE----EEECCchHHHHHHHH
Confidence            357776  589999999865322 1112      333444444    45889999998753    456688999999999


Q ss_pred             HhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCcEE--EEc
Q 009673          186 TAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLI--IAG  258 (529)
Q Consensus       186 ~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-----~pklI--i~~  258 (529)
                      .+++.+++.+++....|..+...+.     .....+..+.  .+..+ ..+.+|++.+++.+.+.     .+..+  ..+
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  143 (345)
T d1v72a1          72 SAMTPPWGNIYCHPASHINNDECGA-----PEFFSNGAKL--MTVDG-PAAKLDIVRLRERTREKVGDVHTTQPACVSIT  143 (345)
T ss_dssp             HTSCCTTEEEEECTTSHHHHSSTTH-----HHHHTTSCEE--EECCC-GGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEE
T ss_pred             HHHHhcCCccccccccceeeechhh-----HHHhcCcccc--ccccc-ccccccHHHhhhhhcccccccccccceeeeee
Confidence            9999999999988776655433221     1122233222  22222 34689999999998752     23332  232


Q ss_pred             CCCCCC----CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCC-C---cccEEEecccccccCCCCeEEEeeCCC
Q 009673          259 ASAYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K---YCDVVTTTTHKSLRGPRGGMIFFKKDP  330 (529)
Q Consensus       259 ~s~~p~----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-~---~aDiv~~S~hK~l~GprgG~i~~~~~~  330 (529)
                      ..+...    ..+++++.++|++||+++++|++|..+........... .   ..+.++.+.+|...+.. +.+......
T Consensus       144 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  222 (345)
T d1v72a1         144 QATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVLAA-EAIVLFNTS  222 (345)
T ss_dssp             SSCTTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGGTCSSC-EEEEESSGG
T ss_pred             ccccccccccchhhhhHHHHHHhcCceeeecccccceeccccccCHHHhhccccccccccCccccccccc-cccccchhh
Confidence            222222    33678888999999999999999876544332211111 1   24466666666543333 333333310


Q ss_pred             cchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceEEE
Q 009673          331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLV  409 (529)
Q Consensus       331 ~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~~v  409 (529)
                          ..........+.+....+..  .+ .+.+........+.....+...+.+.+.+.|.+ .|+.+..+ +.++++++
T Consensus       223 ----~~~~~~~~~~~~~~~~~~~~--~a-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~p-~~~niv~~  294 (345)
T d1v72a1         223 ----LATEMSYRRKRAGHLSSKMR--FL-SAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGG-TEANILFC  294 (345)
T ss_dssp             ----GHHHHHHHHHHTTCCCSSTH--HH-HHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESC-CCSSEEEE
T ss_pred             ----hhhhccccccccccccchhh--HH-hhhhHHHHHHhhhhhhccchhhHHHHHHHHHHhcCCcEeccC-CCccEEEE
Confidence                11111111111111112122  22 222333334444566677777778888888877 57777654 45677777


Q ss_pred             ccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673          410 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG  476 (529)
Q Consensus       410 ~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~  476 (529)
                      ++.      ..+.+.|.+.||.+..+       +..++.|||+++..|    |+||++++++.|+++
T Consensus       295 ~~~------~~~~~~L~~~gi~v~~~-------~~~~~~lR~~~~~~~----T~edid~~le~lr~a  344 (345)
T d1v72a1         295 RLD------SAMIDALLKAGFGFYHD-------RWGPNVVRFVTSFAT----TAEDVDHLLNQVRLA  344 (345)
T ss_dssp             EEC------HHHHHHHHHTTCBCBCS-------SSSTTEEEEECCTTC----CHHHHHHHHHHHHHT
T ss_pred             EcC------HHHHHHHHHcCCCcccc-------CCCCCEEEEECCCCC----CHHHHHHHHHHHHHh
Confidence            763      34556677789887432       234689999887655    489999999999864

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=99.81  E-value=1.8e-18  Score=176.27  Aligned_cols=298  Identities=14%  Similarity=0.097  Sum_probs=189.6

Q ss_pred             hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673          144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI  222 (529)
Q Consensus       144 ~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~  222 (529)
                      ++++++|    +.+++++|.++     .|.+.|||.|+++++.++ +++||+|++++.++.+...        .+...|.
T Consensus        21 ~~~~~fE----~~~~~~~~~~~-----~~~~~SgT~Al~lal~~l~~~~gdeVi~p~~t~~a~~~--------~~~~~g~   83 (374)
T d1o69a_          21 EFVNRFE----QSVKDYSKSEN-----ALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVA--------PICYLKA   83 (374)
T ss_dssp             HHHHHHH----HHHHHHHCCSE-----EEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTH--------HHHHTTC
T ss_pred             HHHHHHH----HHHHHHHCcCe-----EEEeCCHHHHHHHHHHHcCCCCcCEEEeCCcchHhhHH--------HHhhccc
Confidence            5688888    67889999986     366799999999999999 8999999999877654432        3444565


Q ss_pred             eEEEEEcccCCCCCCCCHHHHH--HHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673          223 YFESMPYRLDESTGLVDYDMLE--KTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD  300 (529)
Q Consensus       223 ~~~~v~~~v~~~~~~iD~d~le--~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~  300 (529)
                        +++.+++++.....+.+..+  ..++. ++++|++. ..++...|+++|.++|+++|++||.|+||+.|..+.+....
T Consensus        84 --~pv~~Di~~~~~~~~~~~~~~~~~~~~-~~~aii~~-~~~G~~~d~~~i~~~~~~~~i~vIED~a~a~g~~~~~~~~G  159 (374)
T d1o69a_          84 --KPVFIDCDETYNIDVDLLKLAIKECEK-KPKALILT-HLYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALG  159 (374)
T ss_dssp             --EEEEECBCTTSSBCHHHHHHHHHHCSS-CCCEEEEE-CGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETT
T ss_pred             --eeEecccccccccccccccccchhccc-cccccccc-ccccchhhhHHHHHHhhccCcchhhhhhhhhcceECCeecC
Confidence              88898888555555554433  44444 78888775 33445789999999999999999999999999776553222


Q ss_pred             CCCcccEEEeccc--ccccCCCCeEEEeeCCCcchhHHHhhhcccccCCC----------CCC-C-hHHHHHHHHHHHHH
Q 009673          301 PFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL----------QGG-P-HNHTIGGLAVCLKH  366 (529)
Q Consensus       301 ~~~~aDiv~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~----------~g~-p-~~~~iaala~al~~  366 (529)
                      .  ..|+.++|||  |.++...||+++++++     ++.+++......+.          .|. . .....||+  .+.+
T Consensus       160 ~--~gd~~~fSf~~~K~l~tgeGG~i~tnn~-----~~~~~~~~~~~~g~~~~~~~~~~~~G~N~rm~ei~Aai--g~~q  230 (374)
T d1o69a_         160 T--FGEFGVYSYNGNKIITTSGGGMLIGKNK-----EKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAI--GVAQ  230 (374)
T ss_dssp             S--SSSEEEEECCTTSSSCCSSCEEEEESCH-----HHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHH--HHHH
T ss_pred             C--CCceEEEeccCccccccccceeehhhhH-----HHHHhhccccccccccccccccccCCccccccchhhhh--hHHH
Confidence            2  4688888887  8888788899999875     55544321111000          111 1 11222332  2333


Q ss_pred             hcCchHHHHHHHHHHHHHHHHHHHHhcCcEEe-cCC--CCCce--EEEccCC------------------CCCcHHHHHH
Q 009673          367 AQSPEFKVYQNKVVSNCRALASRLVELGYKLV-SGG--SDNHL--VLVDLRP------------------MGIDGARVEK  423 (529)
Q Consensus       367 ~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~-~~g--t~~~~--~~v~~~~------------------~~i~~~~~~~  423 (529)
                      +  ..+.+..++..++++.+.+.|.+....+. ...  +..++  .+++...                  ..-+.+.+.+
T Consensus       231 L--~~l~~~i~~r~~i~~~y~~~L~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~  308 (374)
T d1o69a_         231 M--EVLEQRVLKKREIYEWYKEFLGEYFSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIE  308 (374)
T ss_dssp             H--TTHHHHHHHHHHHHHHHHHHHTTTEECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHH
T ss_pred             H--hhhhhhcchhHHHHHHHHhhccccccccccccCCCCChhheeeeeccccccccccccccccchhhccchhhHHHHHH
Confidence            3  24456667777778888888865311111 111  11121  1222110                  0112466889


Q ss_pred             hHhcCCeEEcCCCCCCCC-CCCC--------------CCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          424 ILDMASITLNKNSVPGDK-SALV--------------PGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       424 ~L~~~GI~v~~~~~Pg~~-~~~~--------------~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      .|.+.||.++..+.|-+. +.+.              ...|.|.+.    .+++++|++++++.|.+++
T Consensus       309 ~L~~~gI~~r~~y~pl~~~~~~~~~~~~~~pna~~~~~~~i~LP~~----~~lt~~di~~I~~~I~~~l  373 (374)
T d1o69a_         309 DLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSG----TAMSKDDVYEISKLILKSI  373 (374)
T ss_dssp             HHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCC----TTCCHHHHHHHHHHHHHHH
T ss_pred             HHHHCCCCEEEeCcchhhChhhhcCCCCCCHHHHHHHhCEEECcCC----CCCCHHHHHHHHHHHHHHH
Confidence            999999998765544322 1111              123444322    3588999999999998876

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=99.77  E-value=3.5e-17  Score=166.11  Aligned_cols=290  Identities=17%  Similarity=0.198  Sum_probs=187.1

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      |++..+.+|    ++++++-|.+.     .+...||..|+.+++.++++|||+|++.+..|++.....-    .-....|
T Consensus        61 ~nPT~~~LE----~~la~LEgg~~-----a~~~sSGmaAi~~~l~~ll~~Gd~vi~~~~~Yg~t~~~~~----~~l~~~G  127 (397)
T d1y4ia1          61 GNPTTDALE----KKLAVLERGEA-----GLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLS----HSMPKFG  127 (397)
T ss_dssp             SCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHH----THHHHTT
T ss_pred             CCHHHHHHH----HHHHHHhCCcc-----ceeehHHHHHHHHHHhhccCCCCeeeeecccccccchhhh----cccCCCc
Confidence            778888888    67888888875     3556899999999999999999999999987776532110    1111234


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  ++..++      .-|.+.+++++++ ++|+|++..|.||+  ..|+++|+++|+++|+++++|.+-...     ...
T Consensus       128 i--~~~~vd------~~d~~~~~~~i~~-~Tklv~~Esp~NP~l~v~Di~~i~~iA~~~gi~~vvDnT~atP-----~~~  193 (397)
T d1y4ia1         128 I--NVRFVD------AGKPEEIRAAMRP-ETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSP-----YCQ  193 (397)
T ss_dssp             C--EEEEEC------TTSHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCT-----TTC
T ss_pred             e--EeeccC------CCCHHHHHHhcCC-CCcEEEecCCcccceeecccHHHHHHhhcCCceEEecCcccCc-----ccC
Confidence            3  555543      2378999999987 89999999999998  789999999999999999999974322     234


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      .|++ ++||++.|+.|++.|..   +|.+++++      +...+++........|+...+ ..+ ...++-+.  -+.-+
T Consensus       194 ~Pl~~GaDivihS~TKyi~Ghsdvl~G~v~~~~------~~~~~~r~~~~~~~~G~~l~p-~~a-~l~~rgl~--TL~lR  263 (397)
T d1y4ia1         194 QPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQ------EFIDQARFVGLKDITGGCMSP-FNA-WLTLRGVK--TLGIR  263 (397)
T ss_dssp             CGGGGTCSEEEEETTTTTTCSSCCCCEEEEECH------HHHHHHHHTHHHHTTCCCCCH-HHH-HHHHHHHT--THHHH
T ss_pred             cchhcCCCEEEEehhhhcCCCcceeeeccCCCH------HHHHHHHHHHHHhCcCCcCCH-HHH-HHHHcCcC--cHHHH
Confidence            5666 89999999999997744   48888887      444332211111111221111 111 12233332  24667


Q ss_pred             HHHHHHHHHHHHHHHHhc-CcE-EecCCCC---------------CceEEEccCCCCCcHHHHHHhHhcCCeE---EcCC
Q 009673          376 QNKVVSNCRALASRLVEL-GYK-LVSGGSD---------------NHLVLVDLRPMGIDGARVEKILDMASIT---LNKN  435 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~~-G~~-v~~~gt~---------------~~~~~v~~~~~~i~~~~~~~~L~~~GI~---v~~~  435 (529)
                      +++..+|+..+++.|++. .+. |..++-.               ..++.+++.  + +.+...++++...+.   ++.+
T Consensus       264 m~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~h~~~~~~~~g~gg~~sf~~~--~-~~~~~~~f~~~L~l~~~a~SlG  340 (397)
T d1y4ia1         264 MERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIA--G-GLEAGRRMINSVELCLLAVSLG  340 (397)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHCSSCCSEEEEEET--T-HHHHHHHHHHTCSSSEECSCCS
T ss_pred             HHHHHHHHHHHHHHHHhCCCcCeEeCCCCCCCccccccccccCCCCeEEEEEec--C-CHHHHHHHHHcCCccceeeccC
Confidence            889999999999999983 443 3323211               223344443  1 223345555554432   2222


Q ss_pred             C------CCCCC------------CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          436 S------VPGDK------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       436 ~------~Pg~~------------~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      .      .|...            ....++.|||++.        -||.+.+.+-|.++++.
T Consensus       341 g~eSLi~~p~~~th~~~~~e~r~~~Gi~~~liRlsvG--------lEd~~DLi~Dl~~AL~~  394 (397)
T d1y4ia1         341 DTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVG--------LEDPEDIINDLEHAIRK  394 (397)
T ss_dssp             CSSCEEECTTTTTTSSSCHHHHHHTTCCTTEEEEECC--------SSCHHHHHHHHHHHHHH
T ss_pred             cccceeeCccccccccCCHHHHHHcCCCcCEEEEEec--------cCCHHHHHHHHHHHHHH
Confidence            1      12211            0123457899864        27778888888877764

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.77  E-value=5.1e-17  Score=170.39  Aligned_cols=309  Identities=16%  Similarity=0.080  Sum_probs=194.8

Q ss_pred             chhHHHHHHHHHHHHHHHcCCCCCC------CceeeecCChHHHHHHHHHhhcC----------CC--------C-EEEE
Q 009673          143 NEYIDELETLCQKRALAAFNLDENK------WGVNVQPLSGSPANFEVYTAILK----------PH--------D-RIMG  197 (529)
Q Consensus       143 ~~~~d~lE~~a~~~la~~~g~~~~~------~~~~V~~~sGs~A~~~~l~all~----------pG--------D-~Vl~  197 (529)
                      .+...++|..+.+|+++++|.+.+.      .+--+.+++||+||+.++.+..+          +|        + .|++
T Consensus       108 sp~~t~iE~~v~~wl~~l~g~p~~~~~~~~~~~~G~~~~Ggs~anl~al~~AR~~~~~~~~~~~~g~~~~~~~~~~vv~~  187 (476)
T d1js3a_         108 SPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYA  187 (476)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHhCCCcccccCCCCCCCceECCcHHHHHHHHHHHHHHHHHHhhcccccCcccccccCceEEEe
Confidence            4567799999999999999997531      11124556678999988765311          11        1 3444


Q ss_pred             cCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcC-----CcEEEEc--CCCCCCCCCHHH
Q 009673          198 LDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAG--ASAYPRDFDYPR  270 (529)
Q Consensus       198 ~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~-----pklIi~~--~s~~p~~~d~~~  270 (529)
                      .+-   +|++.     .+.+...|..  ...+++| +++.+|+++|++.+++.+     |-+|+.+  .+..+...|+++
T Consensus       188 s~~---~H~Si-----~ka~~~lGl~--~~~v~~d-~~~~md~~~L~~~i~~~~~~g~~p~~VvataGtt~~G~iDpl~~  256 (476)
T d1js3a_         188 SDQ---AHSSV-----ERAGLIGGVK--LKAIPSD-GKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLE  256 (476)
T ss_dssp             ETT---CCHHH-----HHHHHHHTCE--EEEECCC-TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHH
T ss_pred             ccc---ccHHH-----HHHHHhcCce--EEEeccC-CCCCcCHHHHHHHHHHHHhcCCCcEEEeecCCCccceeeccHHH
Confidence            443   33332     1345566764  4455566 578999999999997632     3455554  334445889999


Q ss_pred             HHHHHHHhCCEEEEecccccccccccccCC---CCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh------
Q 009673          271 MRQIADAVGALLMMDMAHISGLVAASVVAD---PFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI------  340 (529)
Q Consensus       271 i~~ia~~~g~~livD~ah~~Gli~~~~~~~---~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i------  340 (529)
                      |++||++||+|+++|+|+............   .++.+|.++.++|||+..|.+ |++++++..    .+...+      
T Consensus       257 I~~i~~~~~~wlHVDAA~Gg~~~~~~~~~~~~~gi~~aDSit~d~HK~l~~P~~~g~~l~r~~~----~~~~~~~~~~~~  332 (476)
T d1js3a_         257 VGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRT----DLTGAFKLDPVY  332 (476)
T ss_dssp             HHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESCHH----HHHGGGC-----
T ss_pred             HHHHHHhcCcEEEEecccchhhhhhcchhhhhcCCcccceeeecCccccccCCcceeecccchH----HHHHHHhcChhh
Confidence            999999999999999996544443332221   234689999999999988887 888887631    111110      


Q ss_pred             ----cc--c-----ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceEE
Q 009673          341 ----NN--A-----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVL  408 (529)
Q Consensus       341 ----~~--~-----~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~~  408 (529)
                          ..  .     .....+++..... ..++.+++.....++.+..++..++++++.+.|++ .+|+++.+. ...++.
T Consensus       333 ~~~~~~~~~~~~~~~~~~~~~sr~~~a-l~lw~~l~~~G~~g~~~~i~~~~~lA~~l~~~l~~~~~fel~~~p-~l~iV~  410 (476)
T d1js3a_         333 LKHSHQGSGLITDYRHWQLPLGRRFRS-LKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEV-TLGLVC  410 (476)
T ss_dssp             -------CCSCCCGGGSSSCSCCCCTH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCC-CSSEEE
T ss_pred             hccccccccccccccccccccchhhHH-HHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcCCCeEEECCC-ceEEEE
Confidence                00  0     0011233333323 34566777777778899999999999999999988 589998653 223333


Q ss_pred             EccCCCCCcH--HHHHHhHhcCC-eEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          409 VDLRPMGIDG--ARVEKILDMAS-ITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       409 v~~~~~~i~~--~~~~~~L~~~G-I~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +.+.  +.+.  +.+.+.|.+.| +.+....+-      +...+|+.+...   ..+++|++.+.+.|+++...
T Consensus       411 Fr~~--~~d~~n~~l~~~l~~~G~~~~s~t~~~------g~~~lR~~i~n~---~Tt~~did~~~~~i~~~a~~  473 (476)
T d1js3a_         411 FRLK--GSDGLNEALLERINSARKIHLVPCRLR------GQFVLRFAICSR---KVESGHVRLAWEHIRGLAAE  473 (476)
T ss_dssp             EEES--SCHHHHHHHHHHHHHHTSCBCEEEEET------TEEEEEEECCCT---TCCHHHHHHHHHHHHHHHHH
T ss_pred             EEcc--CChHHHHHHHHHHHhcCCEEEeeeeEC------CEEEEEEEeCCC---CCCHHHHHHHHHHHHHHHHH
Confidence            3333  2232  34555565555 433221111      124699875321   23589999999999887653

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=99.77  E-value=2.3e-17  Score=167.42  Aligned_cols=214  Identities=18%  Similarity=0.228  Sum_probs=154.1

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      |++....+|    ++++++-|.+.     -+...||..|+.+++.+++++||+|++.+..|++.....    ..-....|
T Consensus        57 ~nPT~~~LE----~~la~LEg~~~-----a~~~~SGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~l~----~~~~~~~G  123 (392)
T d1gc0a_          57 SNPTLNLLE----ARMASLEGGEA-----GLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFL----HHGIGEFG  123 (392)
T ss_dssp             CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHH----HHTGGGGT
T ss_pred             CChHHHHHH----HHHHHHhCCcc-----eeehhhHHHHHHHHHHhhccCCCeeecccccchhhhhhh----hhhhccCC
Confidence            678888888    67888988875     355699999999999999999999999998887753211    11122234


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  ++..++      .-|++++++++++ ++|+|++..|.||+  ..|+++|+++|+++|+++++|.+....+     ..
T Consensus       124 i--~~~~~d------~~d~~~~~~ai~~-~t~lv~~Esp~NP~l~v~Di~~i~~ia~~~g~~~vvDnT~atP~-----~~  189 (392)
T d1gc0a_         124 V--KLRHVD------MADLQALEAAMTP-ATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPY-----LQ  189 (392)
T ss_dssp             C--EEEEEC------TTCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHH-----HC
T ss_pred             c--ccccCC------ccCHHHHHHhCCC-CCeEEEecccccceeeecchHHHHHHHHhcCCEEEEecCccCcc-----cc
Confidence            3  554543      2478999999988 89999999999998  7899999999999999999999854443     24


Q ss_pred             CCCC-cccEEEecccccccCC---CCeEEEeeCCCcchhHHHhhhcccccCCCCCC-ChHHHHHHHHHHHHHhcCchHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFPGLQGG-PHNHTIGGLAVCLKHAQSPEFKV  374 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~-p~~~~iaala~al~~~~~~~~~~  374 (529)
                      .|++ |+|+|+.|++|++.|.   -+|.+++++      +...+++........|+ +.....   ...++.+.  -+..
T Consensus       190 ~Pl~~GaDivihS~TKyi~Ghsd~~~G~v~~~~------~~~~~~r~~~~~~~~G~~~~p~da---~ll~rgl~--TL~l  258 (392)
T d1gc0a_         190 RPLELGADLVVHSATKYLSGHGDITAGIVVGSQ------ALVDRIRLQGLKDMTGAVLSPHDA---ALLMRGIK--TLNL  258 (392)
T ss_dssp             CGGGGTCSEEEEETTTTTTCSSSCCCEEEEECH------HHHHHHHHTHHHHHTCCCCCHHHH---HHHHHHHT--THHH
T ss_pred             ChHHhCCCEEEEecceeecCCcccccccccchh------HHHHHHHHHHHHHccCCcCChhhH---HHHHhccc--cHHH
Confidence            5676 8999999999999774   348888877      44443321111001121 111111   12233332  3577


Q ss_pred             HHHHHHHHHHHHHHHHHhc
Q 009673          375 YQNKVVSNCRALASRLVEL  393 (529)
Q Consensus       375 ~~~~i~~~a~~l~~~L~~~  393 (529)
                      ++++..+|+..+++.|++.
T Consensus       259 Rm~~~~~nA~~lA~~L~~h  277 (392)
T d1gc0a_         259 RMDRHCANAQVLAEFLARQ  277 (392)
T ss_dssp             HHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHhC
Confidence            8899999999999999883

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.75  E-value=2.7e-18  Score=177.55  Aligned_cols=283  Identities=11%  Similarity=0.034  Sum_probs=175.3

Q ss_pred             HHHHHHHHHHHHHHcC-CCCCCCceeeecCChH-HHHHHHHHhh--------cCCCCEEEEcCCCCCccccccccccccc
Q 009673          147 DELETLCQKRALAAFN-LDENKWGVNVQPLSGS-PANFEVYTAI--------LKPHDRIMGLDLPHGGHLSHGFMTPKRR  216 (529)
Q Consensus       147 d~lE~~a~~~la~~~g-~~~~~~~~~V~~~sGs-~A~~~~l~al--------l~pGD~Vl~~~~~~~g~~s~g~~~~~~~  216 (529)
                      .+|++..++ +.+..| +..+.  -.|.+++|+ +++.+++.+|        ++|||+|+++.|.|..+.        ..
T Consensus       103 ~~L~~~i~~-lh~~~gna~t~~--~~IvvG~Gsteli~~~~~AL~~~~~~~~~~pg~~Vv~~~P~y~~Y~--------~~  171 (425)
T d2hoxa1         103 FELEKTIKE-LHEVVGNAAAKD--RYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFR--------EQ  171 (425)
T ss_dssp             HHHHHHHHH-HHHHHTCBCCTT--CEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHH--------HH
T ss_pred             HHHHHHHHH-HHhhhCCCCCCC--CEEEECCCHHHHHHHHHHHhccccccccCCCCCEEEEecCccccHH--------HH
Confidence            367765544 444445 32222  246779998 9999999998        579999999999765331        12


Q ss_pred             cccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEecccccccccc
Q 009673          217 VSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAA  295 (529)
Q Consensus       217 i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~  295 (529)
                      +.+.+.  ..       ..+.+|.+.+++.+++ +++++++++||||+ ..- +     +-.+++.+|+|++++ +..+.
T Consensus       172 ~~~~~~--~~-------~~~~~D~~~~~~~~~~-~~~ii~l~sPnNPtG~l~-~-----~v~~~~~~I~DEaY~-~~~f~  234 (425)
T d2hoxa1         172 TKYFDK--KG-------YVWAGNAANYVNVSNP-EQYIEMVTSPNNPEGLLR-H-----AVIKGCKSIYDMVYY-WPHYT  234 (425)
T ss_dssp             HHHSCB--TT-------EEEEEEGGGGTTCSCG-GGEEEEEESSCTTTCCCC-C-----CSSTTCEEEEECTTC-STTTS
T ss_pred             HHHcCC--CC-------CccCCCHHHHHhhCCC-CceEEEEECCCCCCcchh-h-----hhhhCCEEEEecccc-Ccccc
Confidence            222322  11       1245667777777777 89999999999998 210 0     123589999999853 21111


Q ss_pred             cccCCCCC-cccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc----
Q 009673          296 SVVADPFK-YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ----  368 (529)
Q Consensus       296 ~~~~~~~~-~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~----  368 (529)
                         +.+.. .-+|+++|++|++  +|+|.||++++++     .+.+++.........+.+...++++++ +|+...    
T Consensus       235 ---~~~~~~~~~Ivl~S~SK~fglaGlRiGw~i~~~~-----~i~~~~~~~~~~~~~~vs~~~Q~aa~~-aL~~~~~~~~  305 (425)
T d2hoxa1         235 ---PIKYKADEDILLFTMSKFTGHSGSRFGWALIKDE-----SVYNNLLNYMTKNTEGTPRETQLRSLK-VLKEVVAMVK  305 (425)
T ss_dssp             ---CCCSCBCCSEEEEEHHHHTSCGGGCCEEEEECCH-----HHHHHHHHHHHHHTSSCCHHHHHHHHH-HHHHHHHHHH
T ss_pred             ---chhhhcCCeEEEEeCHHhccCcchheeeEEeCCH-----HHHHHHHHhhccCcccCCHHHHHHHHH-HhhccHHHHH
Confidence               11111 2369999999985  8999999888774     566655443222223445555665543 443211    


Q ss_pred             ------CchHHHHHHHHHHHHHHHHHHHHhcCcEEec----CC----------CCCceEEEccCCCCCcHHHHHHhHhcC
Q 009673          369 ------SPEFKVYQNKVVSNCRALASRLVELGYKLVS----GG----------SDNHLVLVDLRPMGIDGARVEKILDMA  428 (529)
Q Consensus       369 ------~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~----~g----------t~~~~~~v~~~~~~i~~~~~~~~L~~~  428 (529)
                            ...++...+.+.++++.+.+.|.+.+.-.+.    ++          ....+.|+.+...  +..++.++|+++
T Consensus       306 ~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~~~~~l~~~p~~~~~~f~~~~~~~~~~f~wl~~~~~--~~~~~~~lL~e~  383 (425)
T d2hoxa1         306 TQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWE--EDKDCYQTFQNG  383 (425)
T ss_dssp             HHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSG--GGCSHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeccCCccceeeeeeccCCCcceeeeeCCCC--hHHHHHHHHHhC
Confidence                  1224556677788888898998875532221    10          1112345554321  224577889999


Q ss_pred             CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          429 SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       429 GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      ||.+.+    |......++++||++.      .++++++++.++|+++++
T Consensus       384 gI~v~p----Gs~FG~~~~yvRisl~------~~~e~ld~~l~rL~~~v~  423 (425)
T d2hoxa1         384 RINTQN----GVGFEASSRYVRLSLI------KTQDDFDQLMYYLKDMVK  423 (425)
T ss_dssp             TEECEE----GGGGTSCTTEEEEECS------SCHHHHHHHHHHHHHHHT
T ss_pred             CEEEEe----chhcCCCCCEEEEEec------CCHHHHHHHHHHHHHHHh
Confidence            999954    4332234689999952      347889999999988875

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=99.73  E-value=1.4e-17  Score=168.60  Aligned_cols=337  Identities=12%  Similarity=0.065  Sum_probs=189.3

Q ss_pred             eeEecCCCCCcHHHHHHHhhhhhccCCCCCC----CCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHH
Q 009673          105 LELIASENFTSRAVMEAVGSCLTNKYSEGLP----GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA  180 (529)
Q Consensus       105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p----~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A  180 (529)
                      -|..|++..+|++|+++|...+.+.+..|..    +.|   ..++.+.++ .+++.++++|+++.++. +.+..++|+.+
T Consensus         5 ~~F~pGP~~vp~~V~eam~~~~~~~~~~~~~~~~~sHR---s~ef~~~~~-~~r~~l~~l~~~~~~~~-i~~~~gs~t~~   79 (361)
T d2c0ra1           5 YNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHR---GAVYEAVHN-EAQARLLALLGNPTGYK-VLFIQGGASTQ   79 (361)
T ss_dssp             EECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTT---SHHHHHHHH-HHHHHHHHHTTCCSSEE-EEEESSHHHHH
T ss_pred             cccCCCCcCCCHHHHHHHHHHHhhhcccCccccccCcC---CHHHHHHHH-HHHHHHHHHhCCCCCCE-EEEECCCchHH
Confidence            3567888889999999999887653322211    122   345555555 67899999999976421 22323333366


Q ss_pred             HHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 009673          181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS  260 (529)
Q Consensus       181 ~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s  260 (529)
                      +.++...+..+||++++..-.   ++.+.+.   ......|.....+..+   ....+|++++++.+.. . +...+.. 
T Consensus        80 ~ea~~~~l~~~~~~~l~~~~g---~~~~~~~---~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~-~-~~~~v~~-  147 (361)
T d2c0ra1          80 FAMIPMNFLKEGQTANYVMTG---SWASKAL---KEAKLIGDTHVAASSE---ASNYMTLPKLQEIQLQ-D-NAAYLHL-  147 (361)
T ss_dssp             HHHHHHHHCCTTCEEEEEECS---HHHHHHH---HHHHHHSCEEEEEECG---GGTTCSCCCGGGCCCC-T-TEEEEEE-
T ss_pred             HHHHHhccccCCCceEEEeec---hhhhhhh---hhhhhcCceeeeeccc---cccccchhhhhhhccc-C-cceEEEE-
Confidence            667777889999999877532   2221111   1122334433333332   3356777777766654 2 2333321 


Q ss_pred             CCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCeEEEeeCC-Cc-------c
Q 009673          261 AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKD-PV-------L  332 (529)
Q Consensus       261 ~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~-~~-------~  332 (529)
                      ..+...+.++|.++|+++|+++++|++++.|....+     +...|+.+.+++|.++.|.++.+++..+ ..       .
T Consensus       148 ~tg~~~~~~~i~~~~~~~~al~~vDavss~g~~~id-----~~~~di~~~s~~k~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (361)
T d2c0ra1         148 TSNETIEGAQFKAFPDTGSVPLIGDMSSDILSRPFD-----LNQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPT  222 (361)
T ss_dssp             ESEETTTTEECSSCCCCTTSCEEEECTTTTTSSCCC-----GGGCSEEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSCG
T ss_pred             ecccceecceEEEeeccCCceEEEEeeccccccccc-----cccceeEEEecccccccccCcEEEEEhHHhhhCcccccc
Confidence            112245667788899999999999999988765332     2346788888899886666644444432 10       0


Q ss_pred             hhHHHhhhcccccCCCCCCChHHHHHHHHHHH-HHhcCchHHHHHHHHHHHHHHHHHHHHhc-Cc-EEecC-CCCC-ceE
Q 009673          333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCL-KHAQSPEFKVYQNKVVSNCRALASRLVEL-GY-KLVSG-GSDN-HLV  407 (529)
Q Consensus       333 ~~~l~~~i~~~~~p~~~g~p~~~~iaala~al-~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~-~v~~~-gt~~-~~~  407 (529)
                      ...+........   ...++......++..++ ............++...++..+....... .. ..... ...+ ...
T Consensus       223 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~~~  299 (361)
T d2c0ra1         223 MLRYDTYVKNNS---LYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNI  299 (361)
T ss_dssp             GGCHHHHHHTTT---CSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEE
T ss_pred             cccccccccccc---ccccccceeeehhhhHHHhhhhccchHHHHHHHHHHHHHhhhhhhhcccccccCCChhhccceEE
Confidence            011111111111   11222233332222222 22222233445555555566566655552 22 22221 1112 223


Q ss_pred             EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .+.+ +.+++.+++.+.|++.||.+..    |+..   -+++|||+...+    ++||+++++++|++..+
T Consensus       300 ~~~~-~~~~~~~~~~~~L~~~GI~~~~----G~~~---~g~~RIs~~~~~----~~edv~~Lv~~l~~~~~  358 (361)
T d2c0ra1         300 TFRL-ASEELEKEFVKASEQEGFVGLK----GHRS---VGGLRASIYNAV----PYESCEALVQFMEHFKR  358 (361)
T ss_dssp             EEEC-SCHHHHHHHHHHHHHTTEESCB----CCTT---TCSEEEECCTTS----CHHHHHHHHHHHHHHHH
T ss_pred             EEEC-CCcccHHHHHHHHHHCCCEEec----CCCc---CCeEEEEecCCC----CHHHHHHHHHHHHHHHH
Confidence            3444 3455667899999999998744    3221   246999986554    58999999999998654

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=5.3e-16  Score=156.95  Aligned_cols=289  Identities=18%  Similarity=0.191  Sum_probs=186.9

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      |++....+|    ++++++-|.+.     -+...||..|+..++.+++++||.|++.+..|++....-.    .-....|
T Consensus        48 ~nPt~~~le----~~la~LEgg~~-----a~~~sSGMaAi~~~l~~l~~~gd~vv~~~~~yg~t~~~~~----~~~~~~g  114 (384)
T d1cs1a_          48 GNPTRDVVQ----RALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFD----SLAKRGC  114 (384)
T ss_dssp             CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHH----HHHTTTS
T ss_pred             CCHHHHHHH----HHHHHHhCCCc-----eEEecChHHHHHHHHhhcccccceecccccccchhhhhhh----hhhcccc
Confidence            678888888    67888888875     3567999999999999999999999999877765432110    1111123


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  +...++      ..|.+++++.+.+ ++++|++..|.||+  ..|+++|+++|+++|+++++|.+-...     ...
T Consensus       115 ~--~~~~~d------~~d~~~~~~~~~~-~t~~v~~EspsNP~l~v~Di~~i~~ia~~~g~~~vVDNT~atP-----~~~  180 (384)
T d1cs1a_         115 Y--RVLFVD------QGDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSP-----ALQ  180 (384)
T ss_dssp             C--EEEEEC------TTCHHHHHHHHHT-CCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCT-----TTC
T ss_pred             c--cccccc------CCCHHHHHhhccc-cccEEEEeccccccceeccHHHHhhhhhhcCcEEEEeccccCc-----ccc
Confidence            2  333322      3578999999988 99999999999998  789999999999999999999984333     234


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccc-cCCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKV  374 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~  374 (529)
                      .|++ |+|||+.|++|++.|-.   +|.++.+++     ++.+.+.... ..|...+|.    .+ ...++-+.  -+.-
T Consensus       181 ~Pl~~GaDiVvhS~TKyi~Ghsdv~~G~vv~~~~-----~~~~~~~~~~~~~G~~~~p~----~a-~ll~rgL~--TL~l  248 (384)
T d1cs1a_         181 NPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDP-----DVVTELAWWANNIGVTGGAF----DS-YLLLRGLR--TLVP  248 (384)
T ss_dssp             CGGGGTCSEEEEETTTTTTCSSCCCCEEEEESSH-----HHHHHHHHHHHHHTCBCCHH----HH-HHHHHHHT--THHH
T ss_pred             cccccCCCEEEEccccccccCCCcccccccCCch-----hhhhhhhhhhhhhhhccccc----cH-HHHhhccc--hhHH
Confidence            5666 79999999999997754   488887663     4444433211 111111221    11 11233332  3567


Q ss_pred             HHHHHHHHHHHHHHHHHhc-CcE-EecCCCC---------------CceEEEccCCCCCcHHHHHHhHhcCCeEE---cC
Q 009673          375 YQNKVVSNCRALASRLVEL-GYK-LVSGGSD---------------NHLVLVDLRPMGIDGARVEKILDMASITL---NK  434 (529)
Q Consensus       375 ~~~~i~~~a~~l~~~L~~~-G~~-v~~~gt~---------------~~~~~v~~~~~~i~~~~~~~~L~~~GI~v---~~  434 (529)
                      ++++..+|+..+++.|++. .+. |..++-.               ..++.+++..   +.+.+.+.++...+..   +.
T Consensus       249 Rm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~h~l~~r~~~g~gg~~sf~l~~---~~~~a~~f~~~L~l~~~a~Sl  325 (384)
T d1cs1a_         249 RMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG---DEQTLRRFLGGLSLFTLAESL  325 (384)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS---CHHHHHHHHHTCSSSEEBSCC
T ss_pred             HHHHHHHHHHHHHHhcccCCceeeeeeccccchhHHHHHHhhcCCCcceeEEeecc---hHHHHHHHHHhCCcceecccc
Confidence            8899999999999999873 343 3322211               1233344432   3345556666544332   21


Q ss_pred             CCC------CCCC------------CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673          435 NSV------PGDK------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT  480 (529)
Q Consensus       435 ~~~------Pg~~------------~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~  480 (529)
                      +..      |...            ....++-||+++.        -||.+.|.+-|++++..+
T Consensus       326 Gg~eSLi~~p~~~th~~~~~e~r~~~Gi~~~lvRlSvG--------lEd~eDLi~Dl~~AL~aa  381 (384)
T d1cs1a_         326 GGVESLISHAATMTHAGMAPEARAAAGISETLLRISTG--------IEDGEDLIADLENGFRAA  381 (384)
T ss_dssp             CSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECC--------SSCHHHHHHHHHHHHHHH
T ss_pred             CCccceeccccccccccCCHHHHHhcCCCcCeEEEEec--------cCCHHHHHHHHHHHHHHh
Confidence            110      1100            0123456999865        278888888888887654

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.70  E-value=2.4e-16  Score=154.02  Aligned_cols=318  Identities=12%  Similarity=0.100  Sum_probs=178.2

Q ss_pred             cCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecC-ChHHHHHHHH
Q 009673          109 ASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL-SGSPANFEVY  185 (529)
Q Consensus       109 asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~-sGs~A~~~~l  185 (529)
                      ++||.  ++|+|++|+....... ..|      |+..+.    .+.+++++++++|++++    +|.++ +||+||..++
T Consensus         5 ~nd~~~g~~P~v~eAl~~~~~~~-~~~------y~~~~~----~~~lr~~ia~~~g~~~~----~v~~tsggtean~~a~   69 (340)
T d1svva_           5 VNDYSVGMHPKILDLMARDNMTQ-HAG------YGQDSH----CAKAARLIGELLERPDA----DVHFISGGTQTNLIAC   69 (340)
T ss_dssp             SCSCSSCCCHHHHHHHHHHTTCC-CCS------TTCSHH----HHHHHHHHHHHHTCTTS----EEEEESCHHHHHHHHH
T ss_pred             ccCCCCCCCHHHHHHHHHHhhcC-CCC------CCCCHH----HHHHHHHHHHHhCCCcc----eEEEcCCHHHHHHHHH
Confidence            45664  4799999998654322 222      232333    33456899999999875    34444 5679999999


Q ss_pred             HhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc----C--CcEEEEcC
Q 009673          186 TAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF----R--PKLIIAGA  259 (529)
Q Consensus       186 ~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~----~--pklIi~~~  259 (529)
                      .++.++|+.++...+.+.++.....      ....+.  .......  .....+.+.........    .  +.++++..
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (340)
T d1svva_          70 SLALRPWEAVIATQLGHISTHETGA------IEATGH--KVVTAPC--PDGKLRVADIESALHENRSEHMVIPKLVYISN  139 (340)
T ss_dssp             HHHCCTTEEEEEETTSHHHHSSTTH------HHHTTC--CEEEECC--TTSCCCHHHHHHHHHHSCSTTSCEEEEEEEES
T ss_pred             HHHhhhccccccccccceeeeeccc------ccccce--eeeeccc--ccccccchhHHHHhhhhhcccCCcceeeeecc
Confidence            9999999999988876544432221      111111  1112111  22333444433333221    1  23344444


Q ss_pred             CCCCC-CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC----cccEEEecccccccCCCCeEEEeeCCCc
Q 009673          260 SAYPR-DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSLRGPRGGMIFFKKDPV  331 (529)
Q Consensus       260 s~~p~-~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~----~aDiv~~S~hK~l~GprgG~i~~~~~~~  331 (529)
                      ++++. ..   ++..+.++|+++|+++++|.++..+....+.......    ..++...+.+|...++.+++.....   
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~d~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  216 (340)
T d1svva_         140 TTEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFGEALIILND---  216 (340)
T ss_dssp             SCTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTCSSCEEEEECSG---
T ss_pred             cccccccccHHHhhhhhcccccccceeeeeccceeeeecccccccccccccccceeeecCCccccccccccccccch---
Confidence            44444 33   4667788999999999999998766554433222211    2346667777765555545544433   


Q ss_pred             chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEcc
Q 009673          332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL  411 (529)
Q Consensus       332 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~  411 (529)
                         .............. ++...... +.++++.......+..+.++...+++.+.+.|++.|++++.+. ..+++++++
T Consensus       217 ---~~~~~~~~~~~~~~-~~~~~~~~-~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~p~-~~~~v~~~~  290 (340)
T d1svva_         217 ---ALKPNARHLIKQRG-ALMAKGWL-LGIQFEVLMKDNLFFELGAHSNKMAAILKAGLEACGIRLAWPS-ASNQLFPIL  290 (340)
T ss_dssp             ---GGCTTHHHHHHHTT-CCCTTTHH-HHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCC-SSSEECBEE
T ss_pred             ---hhhhhhhhhccccc-CccchhhH-HHHHHHHHhhhhHHHHHHHHHHHHHhhhHHHHhcCCCeeecCC-CceEEEEeC
Confidence               12111111100001 11111111 2222333333445677888889999999999999999987653 345555554


Q ss_pred             CCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          412 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       412 ~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      .     .....+++++ ++.......     +..++.||++++..|    |++|++++++.|++
T Consensus       291 ~-----~~~~~~l~~~-~~~~~~~~~-----~~~~~~vR~s~~~~~----t~edid~~l~~l~~  339 (340)
T d1svva_         291 E-----NTMIAELNND-FDMYTVEPL-----KDGTCIMRLCTSWAT----EEKECHRFVEVLKR  339 (340)
T ss_dssp             E-----HHHHHHHTTT-EECEEEEEE-----TTTEEEEEEECCTTC----CHHHHHHHHHHHHH
T ss_pred             C-----HHHHHHHHHh-hhhhccccc-----CCCCcEEEEECCCCC----CHHHHHHHHHHHhc
Confidence            2     3334443333 332211111     224678999887655    48999999999976

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.70  E-value=5.1e-16  Score=157.05  Aligned_cols=213  Identities=22%  Similarity=0.229  Sum_probs=150.4

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      |++..+.+|    ++++.+-|.+.     -+...||..|+. ++.+++++||+|++.+..|++.....    .......|
T Consensus        47 ~nPt~~~le----~~la~LE~~~~-----a~~fsSGMaAis-all~ll~~Gd~vv~~~~~Yg~t~~l~----~~~~~~~g  112 (380)
T d1ibja_          47 GNPTRDALE----SLLAKLDKADR-----AFCFTSGMAALS-AVTHLIKNGEEIVAGDDVYGGSDRLL----SQVVPRSG  112 (380)
T ss_dssp             CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHH-HHHTTSCTTCEEEEESSCCHHHHHHH----HHTSGGGT
T ss_pred             CChHHHHHH----HHHHHHcCCce-----EEehhhHHHHHH-HHHHhhCCCCEEEEEecccccccchh----hhhhcccc
Confidence            678888888    77888888875     255799998875 67889999999999998887764211    01112234


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  ++..++      ..|.+++++++.+ ++|+|++..+.||+  ..|+++|+++|+++|+++++|.+....     ...
T Consensus       113 i--~~~~~d------~~~~~~~~~ai~~-~t~li~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vVDnT~atP-----~~~  178 (380)
T d1ibja_         113 V--VVKRVN------TTKLDEVAAAIGP-QTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSP-----VLS  178 (380)
T ss_dssp             C--EEEEEC------TTSHHHHHHHCCS-SEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCT-----TTC
T ss_pred             c--cccccC------cchHHHHHHHhcc-CccEEEeccccccccccccHHHHHHHHHHcCCeEEeecccccc-----ccc
Confidence            3  444432      3478999999987 89999999999998  789999999999999999999984333     234


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      .|++ |+|+|+.|++|++.|..   +|.++.+++     ++.+++.....  ..|+... ...+ ...++.+  ..+..+
T Consensus       179 ~Pl~~GaDiVvhS~TKyi~GhsDv~~G~v~~~~~-----~~~~~~~~~~~--~~G~~l~-p~~a-~ll~rgl--~Tl~lR  247 (380)
T d1ibja_         179 RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-----KLAKEVYFLQN--SEGSGLA-PFDC-WLCLRGI--KTMALR  247 (380)
T ss_dssp             CGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSH-----HHHHHHHHHHH--HTTCBCC-HHHH-HHHHHHH--TTHHHH
T ss_pred             cccccCCCEEEecccceeccccCccccccccchh-----hHHHHHHhhcc--ccCCcCC-HHHH-HHHHhcc--hhhhhh
Confidence            5666 79999999999997743   488777763     45555433211  1121111 1111 1223333  245778


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q 009673          376 QNKVVSNCRALASRLVEL  393 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~~  393 (529)
                      +++..+|+..+++.|++.
T Consensus       248 m~~~~~nA~~lA~~L~~h  265 (380)
T d1ibja_         248 IEKQQENARKIAMYLSSH  265 (380)
T ss_dssp             HHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHhC
Confidence            899999999999999983

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=2.4e-15  Score=152.73  Aligned_cols=289  Identities=13%  Similarity=0.079  Sum_probs=183.9

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      |++..+.+|    ++++++-|.+.     -+...||..|+.+++.+++++||+|++.+..|++....-    .+-....|
T Consensus        56 ~nPt~~~le----~~la~LEg~~~-----a~~~~SGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~T~~l~----~~~l~~~G  122 (391)
T d1cl1a_          56 GTLTHFSLQ----QAMCELEGGAG-----CVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFC----SKILSKLG  122 (391)
T ss_dssp             CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHH----HHTGGGGT
T ss_pred             CChhHHHHH----HHHHHHhCCcc-----EEEeccccceeeehhhcccCCCCeEEEecccccchhhhh----hhcccccc
Confidence            678888888    67888888875     355689999999999999999999999998887653211    01112223


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHh--CCEEEEecccccccccccc
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASV  297 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~  297 (529)
                      .  ++..++      ..|.+++++.+++ ++++|++..+.||+  ..|+++++++|+++  |+++++|.+-...     .
T Consensus       123 i--~~~~~d------~~d~~~~~~~i~~-~t~~i~~EtpsNP~l~v~Di~~i~~~a~~~~~g~~~vVDnT~atP-----~  188 (391)
T d1cl1a_         123 V--TTSWFD------PLIGADIVKHLQP-NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAG-----V  188 (391)
T ss_dssp             C--EEEEEC------TTCGGGGGGTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTT-----T
T ss_pred             c--cccccc------Ccccccccccccc-ccceeeecccCcccccccccHHHHHHHHhccCCcEEEEeccccch-----h
Confidence            3  444433      2356788888887 89999999999997  78999999999875  9999999974332     2


Q ss_pred             cCCCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHH
Q 009673          298 VADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK  373 (529)
Q Consensus       298 ~~~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~  373 (529)
                      ...|++ ++|+++.|++|++.|-.   ||.++.+++      +.+++.....  ..|+..... .| ...++-+  ..+.
T Consensus       189 ~~~Pl~~GaDivvhS~TKy~~GhsdvlgG~vv~~~~------~~~~~~~~~~--~~G~~~~p~-~a-~ll~rgl--~TL~  256 (391)
T d1cl1a_         189 LFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNAR------CWEQLRENAY--LMGQMVDAD-TA-YITSRGL--RTLG  256 (391)
T ss_dssp             SSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTT------THHHHHHHHH--HTTCCCCHH-HH-HHHHHHH--TTHH
T ss_pred             hhcccccccceEEeecchhccccccccccceecccc------ccccchhhhh--cccccCCch-hh-hhhhccc--hhHH
Confidence            345666 79999999999998754   488877763      3333322111  011111111 11 1123333  2356


Q ss_pred             HHHHHHHHHHHHHHHHHHhc-CcEEe-cCCCC---------------CceEEEccCCCCCcHHHHHHhHhcCCeE---Ec
Q 009673          374 VYQNKVVSNCRALASRLVEL-GYKLV-SGGSD---------------NHLVLVDLRPMGIDGARVEKILDMASIT---LN  433 (529)
Q Consensus       374 ~~~~~i~~~a~~l~~~L~~~-G~~v~-~~gt~---------------~~~~~v~~~~~~i~~~~~~~~L~~~GI~---v~  433 (529)
                      .++++..+|+..+++.|++. .+.-+ .++-.               ..++.+.+.. +.+.+++.+.++...+.   ++
T Consensus       257 lR~~~~~~nA~~vA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~-~~~~e~~~~f~d~L~l~~~a~S  335 (391)
T d1cl1a_         257 VRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKK-KLNNEELANYLDNFSLFSMAYS  335 (391)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESS-CCCHHHHHHHHTTCSSCBCCSC
T ss_pred             HHHHHHHHHHHHHHHHHHhcccccccccccccchhhHHHHhhccCCCCcceeeeecC-CCCHHHHHHHHHcCCcceEeeC
Confidence            78899999999999999883 34322 22111               1133344542 23455666666654432   22


Q ss_pred             CCCC------CC---------CC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          434 KNSV------PG---------DK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       434 ~~~~------Pg---------~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      .+..      |.         .. -...++-||+++.        -||.+.|.+-|++++.
T Consensus       336 lG~~~SLi~~~~~~~~~~~~~~~~~gi~~~liRlSVG--------lEd~eDLi~Dl~~AL~  388 (391)
T d1cl1a_         336 WGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIG--------LEDVDDLIADLDAGFA  388 (391)
T ss_dssp             CCSSSCEEEEECHHHHHHTSTTCCCCCCSCEEEEECC--------SSCHHHHHHHHHHHHH
T ss_pred             CCCCccceeCCcccccccCCchHhcCCCcCEEEEEec--------cCCHHHHHHHHHHHHH
Confidence            2110      00         00 0122456999864        2777888877777775

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.70  E-value=2.5e-15  Score=152.48  Aligned_cols=217  Identities=18%  Similarity=0.119  Sum_probs=148.1

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      |++..+.+|    ++++++-|.+.     -+...||..|+..++.+++++||+|++.+..|++......    .-....|
T Consensus        65 ~nPt~~~LE----~~la~LEgg~~-----a~~~sSGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~t~~l~~----~~~~~~g  131 (398)
T d1qgna_          65 GNPTTVVLE----EKISALEGAES-----TLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIE----TILPKMG  131 (398)
T ss_dssp             CCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHH----HTGGGGT
T ss_pred             CChHHHHHH----HHHHHHhCCce-----EEEecCcchHHHHHHhhcccccccccccccccchhhhhhc----ccccccc
Confidence            678888888    67888888875     3567999999999999999999999999988776532110    1112233


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  +...++      ..|.++.++.+...++++|++..+.||+  ..|+++|+++|+++|+++++|.+-..     ....
T Consensus       132 i--~~~~~~------~~~~~~~~~~~~~~~t~~v~~EspsNP~l~v~Di~~ia~ia~~~g~~~vVDnT~at-----P~~~  198 (398)
T d1qgna_         132 I--TATVID------PADVGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFAT-----PLNQ  198 (398)
T ss_dssp             C--EEEEEC------SSCHHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTC-----TTTC
T ss_pred             c--cccccc------ccchhhhhhhhccccceEEEccCccccccccchHHHHHHHHhhcCCEEEecceeec-----cccC
Confidence            3  444432      1344555544433389999999999998  78999999999999999999997332     2335


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY  375 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~  375 (529)
                      .|++ |+|||+.|++|++.|..   +|.+..++      ++..++.....  ..|+... ...+ ...++-+  .-+..+
T Consensus       199 ~Pl~~GaDiVihS~TKy~~Ghsdv~~G~v~~~~------~~~~~~~~~~~--~~G~~l~-p~~a-~ll~rgl--~TL~lR  266 (398)
T d1qgna_         199 KALALGADLVLHSATKFLGGHNDVLAGCISGPL------KLVSEIRNLHH--ILGGALN-PNAA-YLIIRGM--KTLHLR  266 (398)
T ss_dssp             CTTTTTCSEEEECTTTTTTCSSSCCCEEEEECH------HHHHHHHHHHH--HHCCCCC-HHHH-HHHHHHG--GGHHHH
T ss_pred             CchhhCCCEEEEechhhcCcccceeehhhcchh------hhhhhhhhhcc--cCCCcCC-HHHH-HHHHhcc--hHHHHH
Confidence            6776 79999999999997753   47766665      45444432210  1121111 1111 1223333  345778


Q ss_pred             HHHHHHHHHHHHHHHHh-cCcE
Q 009673          376 QNKVVSNCRALASRLVE-LGYK  396 (529)
Q Consensus       376 ~~~i~~~a~~l~~~L~~-~G~~  396 (529)
                      +++..+|+..+++.|++ +.+.
T Consensus       267 m~~~~~nA~~lA~~L~~hp~V~  288 (398)
T d1qgna_         267 VQQQNSTALRMAEILEAHPKVR  288 (398)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTEE
T ss_pred             HHHHHHHHHHHHHHHHhCCCee
Confidence            89999999999999988 3443

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=99.68  E-value=8.4e-17  Score=161.67  Aligned_cols=339  Identities=11%  Similarity=-0.036  Sum_probs=187.8

Q ss_pred             eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh--HHHH
Q 009673          105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG--SPAN  181 (529)
Q Consensus       105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~-r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG--s~A~  181 (529)
                      -|..|++..+|++|+++|...+.+.+..|.... -...+.++.+.++ .+++.++++||++.+.   .|.+++|  +.++
T Consensus         3 ~nF~pGP~~~p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~ef~~l~~-~~r~~l~~l~~~~~~~---~v~~~~gs~t~~~   78 (360)
T d1bjna_           3 FNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAE-EAEKDFRDLLNVPSNY---KVLFCHGGGRGQF   78 (360)
T ss_dssp             EECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHH-HHHHHHHHHHTCCTTE---EEEEESSHHHHHH
T ss_pred             EEeCCCCcCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHH-HHHHHHHHHhCCCCCC---EEEEECCchHHHH
Confidence            467788888999999999988765432221100 0112445555555 5789999999997643   2333333  3556


Q ss_pred             HHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 009673          182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA  261 (529)
Q Consensus       182 ~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~  261 (529)
                      .++...+..++|.+++..-.+.+.   .+.   ......+.  ..+.+..+ .....+.+++++.+.. +++++.+...+
T Consensus        79 ~a~~~~~~~~~~~v~~~~~~~~~~---~~~---~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~v~v~~~~  148 (360)
T d1bjna_          79 AAVPLNILGDKTTADYVDAGYWAA---SAI---KEAKKYCT--PNVFDAKV-TVDGLRAVKPMREWQL-SDNAAYMHYCP  148 (360)
T ss_dssp             HHHHHHHCTTCCEEEEEESSHHHH---HHH---HHHTTTSE--EEEEECEE-EETTEEEECCGGGCCC-CSSCSCEEECS
T ss_pred             hhhhhcccccccccceecccchhh---hhH---HHHhhcCc--cceeeccc-cCCCcchhhhhhhhcc-CCceeEEEecc
Confidence            666667788899988875322111   110   01112222  22222222 1234455555555554 66655444222


Q ss_pred             --CCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCc-------
Q 009673          262 --YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPV-------  331 (529)
Q Consensus       262 --~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~-------  331 (529)
                        .++..+++.+  .++.+++.+++|.+++.+.+..     ....+|+.++|.||++.+|.+ |+++..+...       
T Consensus       149 ~~t~~~~~~~~i--~~~~~~~~v~vDa~~~~~~~~v-----d~~~~dv~~~ss~k~~~~~~~~~~~~~~~~~~~~~~~~~  221 (360)
T d1bjna_         149 NETIDGIAIDET--PDFGADVVVAADFSSTILSRPI-----DVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACP  221 (360)
T ss_dssp             EETTTTEECCCC--CCCCTTCCEEEECTTTTTSSCC-----CGGGCSEEEEETTTTTSSTTCEEEEEEGGGCSCCCTTSC
T ss_pred             cccccCccccce--ecccccceeeeeeeccccceee-----eeccceeEEEEcccccccCCCceeEeeehhhhhccccCC
Confidence              3333444433  3567799999998765543321     122589999999999987777 5555544310       


Q ss_pred             chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC--CCCCce-EE
Q 009673          332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG--GSDNHL-VL  408 (529)
Q Consensus       332 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~--gt~~~~-~~  408 (529)
                      ....+....+..  .....++......+...++............++..+.+..+.+.+...+......  ...++. +.
T Consensus       222 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v~~  299 (360)
T d1bjna_         222 SILDYSILNDNG--SMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKRNRSRMNVP  299 (360)
T ss_dssp             GGGCHHHHHHTT--TCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEECCBCGGGBCSSEEE
T ss_pred             cchhhHHHHhhh--hhccccccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhccccccccCCcccccceEEE
Confidence            000111111111  1112333444444444444433333445555566666666666666655544432  111222 23


Q ss_pred             EccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          409 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                      +.+ +.+.+.+.+...|+++||.+..    |+..   -+++|||+...+    ++||+++++++|++..+
T Consensus       300 f~~-~~~~~~~~~~~~l~~~Gi~~~~----G~~~---~g~~Ris~~~~~----t~edV~~li~~l~e~~~  357 (360)
T d1bjna_         300 FQL-ADSALDKLFLEESFAAGLHALK----GHRV---VGGMRASIYNAM----PLEGVKALTDFMVEFER  357 (360)
T ss_dssp             EEE-SSGGGHHHHHHHHHHTTEECCB----CCTT---TCSEEEECCTTS----CHHHHHHHHHHHHHHHH
T ss_pred             EEc-CCcccHHHHHHHHHHCCCEeec----CCCc---cCeEEEEecCCC----CHHHHHHHHHHHHHHHH
Confidence            344 3456677888999999998743    3321   246999986544    58999999999998554

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=99.65  E-value=1.1e-14  Score=147.85  Aligned_cols=217  Identities=18%  Similarity=0.163  Sum_probs=150.3

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      |++..+.+|    ++++++-|.+.     -+...||..|+.+++.+++++||.|++.+..|++....-    .......|
T Consensus        57 ~nPT~~~le----~~la~LEg~~~-----a~~~sSGmaAi~~~~l~l~~~gd~vv~~~~~yg~t~~~~----~~~~~~~g  123 (394)
T d1e5ea_          57 GNPTVSNLE----GKIAFLEKTEA-----CVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALF----EHALTKFG  123 (394)
T ss_dssp             CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHH----HTHHHHTT
T ss_pred             CCHHHHHHH----HHHHHHhCCcc-----eeeeccchHHHHHHHHhhcccccccccccceeehhhHhH----HHHhhccc
Confidence            678888888    67888888875     255689999999999999999999999998776653211    01112223


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHH-HhCCEEEEeccccccccccccc
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIAD-AVGALLMMDMAHISGLVAASVV  298 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~-~~g~~livD~ah~~Gli~~~~~  298 (529)
                      .  ++..++      .-|.+++++.+++ ++|+|++..|.||+  ..|++++.++++ ++|+++++|.+-..     ...
T Consensus       124 i--~~~~~d------~~d~~~~~~~i~~-~t~lv~~Etp~NP~l~v~Di~~~~~~~~~~~g~~vvvDnT~at-----P~~  189 (394)
T d1e5ea_         124 I--QVDFIN------TAIPGEVKKHMKP-NTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCS-----PMI  189 (394)
T ss_dssp             C--EEEEEC------TTSTTHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTC-----TTT
T ss_pred             e--eeeccC------CCCHHHHHHhhcc-cccEEEEeccCCcceeeehhhhhhhccccccCeEEEecCcccC-----ccc
Confidence            3  444433      2356789999988 89999999999997  679999988766 46899999987332     223


Q ss_pred             CCCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673          299 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV  374 (529)
Q Consensus       299 ~~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~  374 (529)
                      ..|++ |+|||+.|++|++.|..   +|.+++++      +....++........|+...+.-+-  ..++-+.  -+..
T Consensus       190 ~~Pl~~GaDiVvhS~TKy~~GhsDv~~G~v~~~~------~~~~~~~~~~~~~~~G~~lsp~~a~--ll~rgl~--TL~l  259 (394)
T d1e5ea_         190 TNPVDFGVDVVVHSATKYINGHTDVVAGLICGKA------DLLQQIRMVGIKDITGSVISPHDAW--LITRGLS--TLNI  259 (394)
T ss_dssp             CCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECH------HHHHHHHHTCCCCCCCCCCCHHHHH--HHHHHHT--THHH
T ss_pred             CCchhcCCCEEEechhhhcCCCcccccccccchh------hHHHHHHHHHHHHhhCCCCChHHHH--HHHhhch--hHHH
Confidence            46676 79999999999997744   48888876      4444333222222223221111111  2233332  3567


Q ss_pred             HHHHHHHHHHHHHHHHHhc-Cc
Q 009673          375 YQNKVVSNCRALASRLVEL-GY  395 (529)
Q Consensus       375 ~~~~i~~~a~~l~~~L~~~-G~  395 (529)
                      ++++..+|+..++++|++. .+
T Consensus       260 Rm~r~~~nA~~lA~~L~~hp~V  281 (394)
T d1e5ea_         260 RMKAESENAMKVAEYLKSHPAV  281 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHTCTTE
T ss_pred             HHHHHHHHHHHHHHHHhhcCCc
Confidence            8899999999999999984 44

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=99.64  E-value=9.1e-15  Score=145.46  Aligned_cols=205  Identities=15%  Similarity=0.149  Sum_probs=141.3

Q ss_pred             HHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC
Q 009673          155 KRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES  234 (529)
Q Consensus       155 ~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~  234 (529)
                      ++++++-|.+.     -+...||..|+..+++++++|||+|++.+.-|++.+..-    .+-..-.|.  ++..++    
T Consensus         5 ~~la~Leg~~~-----a~~~sSGMaAi~~~l~~ll~~Gd~iv~~~~~Yg~t~~~~----~~~l~~~gi--~~~~~d----   69 (331)
T d1pffa_           5 GKIAKLEHAEA-----CAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALF----EHQLRKFGV--EVDFID----   69 (331)
T ss_dssp             HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHH----HTHHHHTTC--EEEEEC----
T ss_pred             HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHH----HHHHHhcCe--EEEEec----
Confidence            67888888875     255689999999999999999999999998887653211    011122343  554543    


Q ss_pred             CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHH-HHhCCEEEEecccccccccccccCCCCC-cccEEEe
Q 009673          235 TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIA-DAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTT  310 (529)
Q Consensus       235 ~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia-~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~  310 (529)
                        .-|.+.+++++++ ++++|++..+.||.  ..|++++++++ +++|+++++|.+-...+     ...|++ ++||++.
T Consensus        70 --~~d~~~~~~~i~~-~t~~i~~Es~~np~~~v~d~~~~~~~~a~~~~~~~vVDnT~atp~-----~~~pl~~GaDiVv~  141 (331)
T d1pffa_          70 --MAVPGNIEKHLKP-NTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPI-----LTNPLDLGVDIVVH  141 (331)
T ss_dssp             --TTSTTHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHH-----HCCGGGGTCSEEEE
T ss_pred             --ccchhhHhhhccc-ccceeeeecccccccccccchhhhhhhhcccCceEEeeccccccc-----cccccccCCCEEEe
Confidence              2377889999988 89999999888887  77999999885 67899999998743322     245666 7999999


Q ss_pred             cccccccCC---CCeEEEeeCCCcchhHHHhhhcccccCCCCCC-ChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 009673          311 TTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFPGLQGG-PHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL  386 (529)
Q Consensus       311 S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~-p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l  386 (529)
                      |++|++.|-   -+|.++.++      +.........+....|+ +......-+...++     .+..++++..+|+..+
T Consensus       142 S~TKy~~Gh~d~~~G~v~~~~------~~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~-----Tl~~Rm~~~~~nA~~l  210 (331)
T d1pffa_         142 SATKYINGHTDVVAGLVCSRA------DIIAKVKSQGIKDITGAIISPHDAWLITRGTL-----TLDMRVKRAAENAQKV  210 (331)
T ss_dssp             ETTTTTSSSSSCCCEEEEECH------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHH
T ss_pred             cchhhcCCCCccccccccccc------cchhhhhhhhhhhccCCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHH
Confidence            999999774   348888876      33333222212222232 22221111111222     3467789999999999


Q ss_pred             HHHHHhc
Q 009673          387 ASRLVEL  393 (529)
Q Consensus       387 ~~~L~~~  393 (529)
                      ++.|++.
T Consensus       211 A~~L~~h  217 (331)
T d1pffa_         211 AEFLHEH  217 (331)
T ss_dssp             HHHHHHC
T ss_pred             HHhhhhC
Confidence            9999883

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=99.61  E-value=2.7e-14  Score=145.71  Aligned_cols=163  Identities=21%  Similarity=0.154  Sum_probs=121.7

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      |++..+.+|    ++++++-|.+.     -+...||..|+.+++.+++++||+|++.+..|++....-    .......|
T Consensus        56 ~nPT~~~LE----~~la~LE~~~~-----a~~~~SGmaAi~~~~~~l~~~gd~il~~~~~Yg~t~~l~----~~~~~~~g  122 (421)
T d2ctza1          56 MNPTVDVLE----KRLAALEGGKA-----ALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQF----KVTLKRLG  122 (421)
T ss_dssp             BCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHH----HTHHHHTT
T ss_pred             CCHHHHHHH----HHHHHHhCCCe-----EEEecChHHHHHHHHHhhcccccceeecCCcCCchhHHH----HHHHhhcc
Confidence            678888888    67888888875     355699999999999999999999999998887653211    11112233


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA  299 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~  299 (529)
                      .  +...++.     .-+.+..++.+++ ++|+|++..|.||+  ..|+++|+++|+++|+++++|.+-+..    ....
T Consensus       123 i--~~~~~d~-----~~~~~~~~~~~~~-~t~li~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vvDnT~a~t----P~~~  190 (421)
T d2ctza1         123 I--EVRFTSR-----EERPEEFLALTDE-KTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMG----GYLL  190 (421)
T ss_dssp             C--EEEECCT-----TCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGG----GTSC
T ss_pred             c--cceeccc-----ccCcchhccccCC-CceEEEEcCCCcceeEecchHHHHHHHHhcCCceEeccccccc----ceec
Confidence            3  4445432     1234566667776 89999999999998  789999999999999999999974311    2234


Q ss_pred             CCCC-cccEEEecccccccCCC---CeEEEeeCC
Q 009673          300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKD  329 (529)
Q Consensus       300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~  329 (529)
                      .|+. |+|||+.|++|++.|-.   +|.++.++.
T Consensus       191 ~Pl~~GaDiVvhS~TKyl~GHsD~l~G~vv~~~~  224 (421)
T d2ctza1         191 RPLAWGAALVTHSLTKWVGGHGAVIAGAIVDGGN  224 (421)
T ss_dssp             CGGGGTCSEEEEETTTTTTCSSCCCCEEEEECSC
T ss_pred             cccccCCcEEEEechhhccCCCCeEEEEEEcCCc
Confidence            5666 89999999999997744   488887664

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.60  E-value=2.3e-14  Score=145.33  Aligned_cols=210  Identities=15%  Similarity=0.141  Sum_probs=143.9

Q ss_pred             CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673          142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS  221 (529)
Q Consensus       142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g  221 (529)
                      |++..+.+|    ++++++-|.+.     -+...||..|+. ++.+++++||+|++.+..|++.....    ..-....|
T Consensus        53 gnPT~~~lE----~~la~LE~~~~-----a~~~sSGmaAi~-~~l~~l~~gd~iv~~~~~yg~t~~~~----~~~l~~~g  118 (393)
T d1n8pa_          53 QNPNRENLE----RAVAALENAQY-----GLAFSSGSATTA-TILQSLPQGSHAVSIGDVYGGTHRYF----TKVANAHG  118 (393)
T ss_dssp             CCHHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHH-HHHHTSCSSCEEEEESSCCHHHHHHH----HHTSTTTC
T ss_pred             CChHHHHHH----HHHHHHhCCce-----EEEecCchhHHH-hhhhcccCCCeeeeeeeecccchhhh----hhhhhccc
Confidence            678888888    67888888775     356789998886 45577899999999988776543211    01111223


Q ss_pred             ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHH----HhCCEEEEecccccccccc
Q 009673          222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIAD----AVGALLMMDMAHISGLVAA  295 (529)
Q Consensus       222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~----~~g~~livD~ah~~Gli~~  295 (529)
                      .  ++..++       .+.+++++.+++ ++|+|++..|.||+  ..|+++|+++|+    ++|+++++|.+-...    
T Consensus       119 i--~~~~~~-------~~~~~~~~~i~~-~t~lv~~EspsNP~l~v~Di~~ia~~a~~~~~~~g~~lvVDnT~atP----  184 (393)
T d1n8pa_         119 V--ETSFTN-------DLLNDLPQLIKE-NTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSP----  184 (393)
T ss_dssp             S--CCEEES-------SHHHHHHHHSCS-SEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHH----
T ss_pred             c--eeEEee-------cchHHHHHHhhh-hcceeEecCcchhhhhccchhhhhhhhhhhcccCCceEEEecCccCc----
Confidence            2  222211       245789999988 89999999999998  789999999999    678999999974322    


Q ss_pred             cccCCCCC-cccEEEecccccccCC---CCeEEEeeCCCcchhHHHhhhcccc-cCCCCCCChHHHHHHHHHHHHHhcCc
Q 009673          296 SVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSP  370 (529)
Q Consensus       296 ~~~~~~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~  370 (529)
                       ....|++ |+|||+.|++|++.|.   -+|.++.++.     ++.+++.... ..|  +.+...  . .+..++.+.  
T Consensus       185 -~~~~Pl~~GADiVvhS~TKyi~GhsDv~~G~v~~~~~-----~~~~~l~~~~~~~G--~~~~p~--~-a~ll~rgl~--  251 (393)
T d1n8pa_         185 -YISNPLNFGADIVVHSATKYINGHSDVVLGVLATNNK-----PLYERLQFLQNAIG--AIPSPF--D-AWLTHRGLK--  251 (393)
T ss_dssp             -HHCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCH-----HHHHHHHHHHHHHC--CCCCHH--H-HHHHHHHHT--
T ss_pred             -ccCCchhhCCCEEEEccccccCCCCccccceeeecch-----hHHHHHHHHHhhcC--CCCChH--H-HHHHHhCCc--
Confidence             2345666 7999999999999774   4588777663     4555554321 111  111111  1 122334332  


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHh
Q 009673          371 EFKVYQNKVVSNCRALASRLVE  392 (529)
Q Consensus       371 ~~~~~~~~i~~~a~~l~~~L~~  392 (529)
                      -+..++++..+|+..+++.|++
T Consensus       252 Tl~lR~~~~~~nA~~lA~~L~~  273 (393)
T d1n8pa_         252 TLHLRVRQAALSANKIAEFLAA  273 (393)
T ss_dssp             THHHHHHHHHHHHHHHHHHHTS
T ss_pred             chhhHHHHHHHHHHHHHHHHHh
Confidence            3577889999999999999975

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=99.60  E-value=1.1e-15  Score=153.82  Aligned_cols=341  Identities=11%  Similarity=-0.012  Sum_probs=178.2

Q ss_pred             ceeEecCCCCCcHHHHHHHhhhhhccCCCCCC-CCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHH
Q 009673          104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PAN  181 (529)
Q Consensus       104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p-~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~  181 (529)
                      .-+..|++..+|++|+++|...+.+-+..|.. -.......++.+.++ .+++.++++++++.++   .|.+++|+ +++
T Consensus         4 ~~nF~pGP~~~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~~~~~~~~-~~r~~l~~l~~~~~~~---~i~~~~gt~~~~   79 (360)
T d1w23a_           4 VFNFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHE-QAQNLLRELLQIPNDY---QILFLQGGASLQ   79 (360)
T ss_dssp             CEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHH-HHHHHHHHHHTCCTTE---EEEEESSHHHHH
T ss_pred             eeEeCCCCcCCCHHHHHHHHHHHHhhcccCccccccCcCCHHHHHHHH-HHHHHHHHHhCCCCCC---EEEEeCCcHHHH
Confidence            34677888889999999999877553221110 001112344545444 6789999999998753   35556665 444


Q ss_pred             H-HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 009673          182 F-EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS  260 (529)
Q Consensus       182 ~-~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s  260 (529)
                      . ++...+.++++.+++....   +....+.   ......+........+   +....+.+++++....  .+...+. .
T Consensus        80 ~~~~~~~~~~~~~~v~~~~~g---~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~-~  147 (360)
T d1w23a_          80 FTMLPMNLLTKGTIGNYVLTG---SWSEKAL---KEAKLLGETHIAASTK---ANSYQSIPDFSEFQLN--ENDAYLH-I  147 (360)
T ss_dssp             HHHHHHHHCCTTCEEEEEECS---HHHHHHH---HHHHTTSEEEEEEECG---GGTSCSCCCGGGCCCC--TTEEEEE-E
T ss_pred             HHHHHhhhcccCcccceeecc---chhhhhH---HHHHHhhhcceeeccc---cccccchhhhhhcccc--cccceeE-e
Confidence            4 4555668888999887532   2111111   1112223322222222   1122333333333322  2333332 2


Q ss_pred             CCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCeEEEeeCCC-------cch
Q 009673          261 AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDP-------VLG  333 (529)
Q Consensus       261 ~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~-------~~~  333 (529)
                      ..+...|+++|.++|+++|+++++|++++.|....+....   ++|+.+++.||+++ |.+|+++.++..       ...
T Consensus       148 ~tg~~~~~~~i~~~~~~~g~l~ivDavqs~g~~~id~~~~---~vd~~~~~~~k~~~-~~~~~~~~~~~~~~~~~~~~~~  223 (360)
T d1w23a_         148 TSNNTIYGTQYQNFPEINHAPLIADMSSDILSRPLKVNQF---GMIYAGAQKNLGPS-GVTVVIVKKDLLNTKVEQVPTM  223 (360)
T ss_dssp             ESEETTTTEECSSCCCCCSSCEEEECTTTTTSSCCCGGGC---SEEEEETTTTTSCT-TCEEEEEEHHHHCSCCTTCCGG
T ss_pred             cCCccccceeeeeccccceeeEEeeccccccccccccccc---cceEEeeccccccC-CcceeeEechhhhcccccCCcc
Confidence            2234678889999999999999999999988765443322   46677777666532 333555544310       000


Q ss_pred             hHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHhc--CcEEecC-CCCCc-eEE
Q 009673          334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVEL--GYKLVSG-GSDNH-LVL  408 (529)
Q Consensus       334 ~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~~--G~~v~~~-gt~~~-~~~  408 (529)
                      ..+......   .....++......+...++....... .....++...++..........  ....... ...++ .+.
T Consensus       224 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~vvs  300 (360)
T d1w23a_         224 LQYATHIKS---DSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVT  300 (360)
T ss_dssp             GCHHHHHHT---TTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEE
T ss_pred             hhhhhhhhh---hhhcccccceeeechhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhcccccccCCChhhcceeEEE
Confidence            001111111   11122333333333222222222122 2334444444444444444432  2222221 11122 233


Q ss_pred             EccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          409 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      +.+. .+.+.+++...|.++||.+..+    +.   .-++||||+...    ++.||+++|+++|++..++
T Consensus       301 f~i~-~~~~~~~~~~~l~~~GI~~~~G----~~---~~ggiRiS~~~~----~t~e~V~~Li~~~~~~~~~  359 (360)
T d1w23a_         301 FNLR-NEELNQQFLAKAKEQGFVGLNG----HR---SVGGCRASIYNA----VPIDACIALRELMIQFKEN  359 (360)
T ss_dssp             EECS-SHHHHHHHHHHHHHTTEESCBC----CT---TTCSEEEECCTT----SCHHHHHHHHHHHHHHHHH
T ss_pred             EEcC-CCccHHHHHHHHHHCCCeeeeC----CC---ccCcEEEEeeCC----CCHHHHHHHHHHHHHHHhc
Confidence            3443 3344567888899999997443    22   125799997432    4689999999999887664

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=99.54  E-value=3.5e-13  Score=138.16  Aligned_cols=291  Identities=15%  Similarity=0.070  Sum_probs=178.4

Q ss_pred             HHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcc
Q 009673          153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR  230 (529)
Q Consensus       153 a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~  230 (529)
                      -+.+++++.|.+.    ++.++..|++|.+.++...  ....+++++....|+..  |+-    ....+...+++++.++
T Consensus       113 ~q~~l~eltGmd~----~n~s~~~ga~a~~~~~~~~~~~~~~~~~~v~~~~~p~~--~~v----~~t~a~~~g~~vv~v~  182 (437)
T d1wyua1         113 YQTMIAELAGLEI----ANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEY--RAV----LRAYLEAVGAKLLTLP  182 (437)
T ss_dssp             HHHHHHHHHTSSE----ECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHH--HHH----HHHHHHHTTCEEEEEC
T ss_pred             HHHHHHHhhCCCc----cccCchHHHHHHHHHHHHHHhhhcccccccccccChHH--hhh----hhhhcccceeeEEeee
Confidence            4589999999997    7899999996666544433  23456788776655432  121    0111222335777776


Q ss_pred             cCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEE
Q 009673          231 LDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVV  308 (529)
Q Consensus       231 v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv  308 (529)
                      .+.  +..+.++    +.+ ++..|++.+||+-+ ..|+++|.+++++.|+++++|+.-. .   .+....|-+ ++||+
T Consensus       183 ~~~--~~~~~~~----~~~-~~Aavmi~~Pnt~G~~ed~~~i~~~~h~~G~l~~~~ad~~-a---l~~l~~Pg~~GaDi~  251 (437)
T d1wyua1         183 LEG--GRTPLPE----VGE-EVGAVVVQNPNFLGALEDLGPFAEAAHGAGALFVAVADPL-S---LGVLKPPGAYGADIA  251 (437)
T ss_dssp             CBT--TBCCCCC----CCT-TEEEEEEESSCTTSBCCCHHHHHHHHHHTTCEEEEECCTT-G---GGTBCCHHHHTCSEE
T ss_pred             ccc--ccchhhh----hcc-ceeEEEEccccccccccchHHHHHHhhhccceEEeeechh-h---hhccccccccccceE
Confidence            652  3232222    334 67888898888766 6689999999999999988885421 1   122223333 79999


Q ss_pred             Eeccccc------ccCCCCeEEEeeCCCc-------c---------------hhHHHhhhcccccCCCCCCC-hHHHHHH
Q 009673          309 TTTTHKS------LRGPRGGMIFFKKDPV-------L---------------GVELESAINNAVFPGLQGGP-HNHTIGG  359 (529)
Q Consensus       309 ~~S~hK~------l~GprgG~i~~~~~~~-------~---------------~~~l~~~i~~~~~p~~~g~p-~~~~iaa  359 (529)
                      +++ ||.      ++||..|++.++++..       .               ...-.+.|++.......++. ....+.+
T Consensus       252 ~g~-~q~fg~p~g~GGP~~G~~a~~~~l~r~lPgrivg~s~d~~G~~~~~l~lqtreqhIrRekatsnict~q~l~a~~a  330 (437)
T d1wyua1         252 VGD-GQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMG  330 (437)
T ss_dssp             EEE-CTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHH
T ss_pred             eec-cceeccccCCCcCccccccccchhhccccccccccccccCCcccceeecccccccccccccccchhhHHHHHHHHH
Confidence            988 554      3678789999987410       0               00001111111111111111 1111211


Q ss_pred             HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCC
Q 009673          360 LAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVP  438 (529)
Q Consensus       360 la~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~P  438 (529)
                      . +-+..+..+++++..++...|+.++.+.|.+ .|+.++.++..-|-+.+++.   .+..++.++|.++||.......|
T Consensus       331 ~-~Y~~~lG~~GL~~ia~~a~~~A~yl~~~L~~~~g~~~~~~~~~f~ef~v~~~---~~~~~i~k~L~d~G~~~~~~~~~  406 (437)
T d1wyua1         331 A-MYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFALALP---KDPEAVRRALAERGFHGATPVPR  406 (437)
T ss_dssp             H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEEEEECS---SCHHHHHHHHHHTTCCCCEECCT
T ss_pred             H-HHhhhcCcccHHHHHHHHHHHHHHHHHHhhhcCCeeccCCCCeeeEEEEECC---CCHHHHHHHHHhCCCCCCccccc
Confidence            1 1233344567899999999999999999988 58887754333344555543   36788999999999964322111


Q ss_pred             CCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          439 GDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       439 g~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                          ...++.+.|+....    .+++|++++++++++++
T Consensus       407 ----~~~~~~lli~~TE~----~tkeeiD~~v~al~eil  437 (437)
T d1wyua1         407 ----EYGENLALFAATEL----HEEEDLLALREALKEVL  437 (437)
T ss_dssp             ----TSCSSEEEEECCTT----CCHHHHHHHHHHHHHHC
T ss_pred             ----CCCCCeEEEecCCC----CCHHHHHHHHHHHHHhC
Confidence                22356788886554    45899999999998864

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=99.44  E-value=2.6e-11  Score=125.55  Aligned_cols=296  Identities=15%  Similarity=0.137  Sum_probs=183.5

Q ss_pred             HHHHHHHcCCCCCCCceeeecCChHHHHHHHH-Hhh---cCCC----CEEEEcCCCCCccccccccccccccccccceEE
Q 009673          154 QKRALAAFNLDENKWGVNVQPLSGSPANFEVY-TAI---LKPH----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE  225 (529)
Q Consensus       154 ~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l-~al---l~pG----D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~  225 (529)
                      +..+++++|.+.    +|..+..|++|...++ ++.   -+.|    ..++...+.+..... .      .....+  .+
T Consensus       112 Qtmi~eLTGMdv----aNaS~yDGatA~aeA~~ma~r~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~--~~  178 (471)
T d1wyub1         112 GEYLKALTGMDA----ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNP-A------TASMAG--YQ  178 (471)
T ss_dssp             HHHHHHHHTCSE----EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHH-H------HHHHTT--CE
T ss_pred             HHHHHHHhCCCc----cccccchHHHHHHHHHHHHHHHhhhcccccccccccCCccccccee-e------eeeccc--ce
Confidence            488999999997    6888899985554333 332   1122    223333332221110 0      111122  35


Q ss_pred             EEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC
Q 009673          226 SMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK  303 (529)
Q Consensus       226 ~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~  303 (529)
                      .+.++.+ +.+..|.+.+.....+ ++..+++..|++.+  ..+.+++.++++++|..+++|.+....+.  +..+.+-.
T Consensus       179 ~~~~~~~-~~~~~~~~~~~~~~~~-~~a~v~v~~p~~~g~~e~~~~~~~~~~h~~g~~~~~~~~~~~~~~--~l~~p~~~  254 (471)
T d1wyub1         179 VREIPSG-PEGEVDLEALKRELGP-HVAALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLNAIM--GWARPGDM  254 (471)
T ss_dssp             EEEECBC-TTSSBCHHHHHHHCST-TEEEEEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTT--TTCCHHHH
T ss_pred             eeccccc-ccccccchhhhhhhhc-cccceeeccCCCcccccchhhhhHHHHHhccccccccccchhhhh--hccccCcc
Confidence            5555544 4578899999888766 67778888887776  34588999999999999999976332211  11111112


Q ss_pred             cccEEEecccccc------cCCCCeEEEeeCCCcchhHHHhhhccc------------------ccCCCCCCC-hHHHHH
Q 009673          304 YCDVVTTTTHKSL------RGPRGGMIFFKKDPVLGVELESAINNA------------------VFPGLQGGP-HNHTIG  358 (529)
Q Consensus       304 ~aDiv~~S~hK~l------~GprgG~i~~~~~~~~~~~l~~~i~~~------------------~~p~~~g~p-~~~~ia  358 (529)
                      ++|+++...|++|      +||..|++.++++      +...+--.                  .-.-..++. ....++
T Consensus       255 g~div~vg~~q~~G~P~~~GGP~~G~~a~~~~------~~R~~PGRiV~~~~~~~~~~~~REqhIrRe~actnqaL~al~  328 (471)
T d1wyub1         255 GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAH------LAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVR  328 (471)
T ss_dssp             TCSEEECCTTTTTCCCCTTSCCCCCCEEECGG------GGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHH
T ss_pred             cccccccccccccccccccccccccceeehhh------hhccCCCceecCCCccccccCCCcccccchhhhhhhHHHHHH
Confidence            6888888888875      4565689888873      43332100                  000001111 122222


Q ss_pred             HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCC
Q 009673          359 GLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVP  438 (529)
Q Consensus       359 ala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~P  438 (529)
                      |. +-+..+..+++++..++...++.++++.|+..|+++..++..-+-+++++ +.+++..++.+.|.+.||.-.....|
T Consensus       329 A~-vYlsllG~~GL~elA~~~~~~A~Yla~~L~~~G~~~~~~~~ff~EFvv~~-~~~~~~~~i~k~L~~~G~~~~~~~~p  406 (471)
T d1wyub1         329 AW-AYIRTLGLEGLKKAAALAVLNARYLKELLKEKGYRVPYDGPSMHEFVAQP-PEGFRALDLAKGLLELGFHPPTVYFP  406 (471)
T ss_dssp             HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCSSCSSCCSCEEEBC-STTCCHHHHHHHHHHTTCCCCEESCS
T ss_pred             HH-HHHHHhCchhHHHHHHHHHHHHHHHHHHHhhcCceeccCcceeeEEeecC-CCCCCHHHHHHHHHHcCCCCCcccCc
Confidence            21 22444556788999999999999999999889999876543334456665 45677777888888889853222222


Q ss_pred             CCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHH
Q 009673          439 GDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLE  482 (529)
Q Consensus       439 g~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~  482 (529)
                          ...++.+-|+....+    +++||++++++|+++++...+
T Consensus       407 ----~~~~~~llv~vTE~~----tkedID~lv~aL~~i~~e~~~  442 (471)
T d1wyub1         407 ----LIVKEALMVEPTETE----AKETLEAFAEAMGALLKKPKE  442 (471)
T ss_dssp             ----TTSTTCEEECCCTTS----CHHHHHHHHHHHHHHHTSCHH
T ss_pred             ----CCCCCeEEEecCCCC----CHHHHHHHHHHHHHHHHhhHH
Confidence                224567888765544    589999999999999986644

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=99.41  E-value=6.4e-11  Score=121.00  Aligned_cols=317  Identities=13%  Similarity=0.083  Sum_probs=168.5

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----  189 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all----  189 (529)
                      -.|+|.+|+...+.+ +.....   .+. ......    +.+.+.++.+.+.     .....||++|+..++....    
T Consensus        56 ~~p~v~~Ai~~q~~~-~~~~~~---~~~-~~~~~~----~~~~~~~~~~~~~-----v~~~~sgs~a~~~a~k~ar~~~~  121 (404)
T d1z7da1          56 CHPNILNAMINQAKN-LTICSR---AFF-SVPLGI----CERYLTNLLGYDK-----VLMMNTGAEANETAYKLCRKWGY  121 (404)
T ss_dssp             TCHHHHHHHHHHHTT-CSCCCT---TSE-EHHHHH----HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHh-CCCccc---ccc-hHHHHH----HHHhhhhccccce-----eeeeccccchHHHHHHHHHHHHh
Confidence            478999998876643 221111   111 122233    3356667777653     2456899998887765321    


Q ss_pred             ------CCCCEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCC---CCCCHHHHHHHhhhcCCcEEEEcC
Q 009673          190 ------KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAILFRPKLIIAGA  259 (529)
Q Consensus       190 ------~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~~---~~iD~d~le~~i~~~~pklIi~~~  259 (529)
                            .....++...-.+.     |....  .....+.. +.....+..+..   ..-+.+.++..+.+.+..+||+..
T Consensus       122 ~~~~~~~~~~~~~~~~~~~h-----g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EP  194 (404)
T d1z7da1         122 EVKKIPENMAKIVVCKNNFS-----GRTLG--CISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELKDPNVCAFIVEP  194 (404)
T ss_dssp             HTSCCCTTCCEEEEETTC---------------------------------CEEEECTTCHHHHHHHHTSTTEEEEEECS
T ss_pred             hcccccccccccccccccCC-----CCccc--ccccccccccccCCCCCCccccccccchHHHHHHHhcCCCEEEEEEEE
Confidence                  12235665543322     21100  01111110 011111111000   123567777776654556777752


Q ss_pred             C--CCCCCCC----HHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEEEecccccccC--CCCeEEEeeC
Q 009673          260 S--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLRG--PRGGMIFFKK  328 (529)
Q Consensus       260 s--~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv~~S~hK~l~G--prgG~i~~~~  328 (529)
                      -  +.+...+    +++|+++|++||+++|+|++|. |+--.+..  ..-+. ..|+++.+  |.++|  ...|.+++++
T Consensus       195 i~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~t-GfgRtG~~~~~e~~gv~PDivt~g--K~l~gG~~p~~~v~~~~  271 (404)
T d1z7da1         195 IQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQT-GLGRTGKLLCVHHYNVKPDVILLG--KALSGGHYPISAVLAND  271 (404)
T ss_dssp             SBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTSSCCEEEEECH
T ss_pred             EcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCcc-CCCcccccccccccCCCCCEEEEc--ccccCCCCCcccccchH
Confidence            1  2222222    8999999999999999999974 44211110  00111 36898765  99954  5678888888


Q ss_pred             CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cCcE-EecCCCC
Q 009673          329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYK-LVSGGSD  403 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~~-v~~~gt~  403 (529)
                            ++.+.++.....+++++......+++ ..|+.+..+.+   .+++.+..+.+.+.|.+    .++. -+.+ . 
T Consensus       272 ------~i~~~~~~~~~~~T~~gnpl~~aaa~-a~L~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~v~~vrg-~-  339 (404)
T d1z7da1         272 ------DIMLVIKPGEHGSTYGGNPLAASICV-EALNVLINEKL---CENAEKLGGPFLENLKRELKDSKIVRDVRG-K-  339 (404)
T ss_dssp             ------HHHTTCCTTCCCCTTTTCHHHHHHHH-HHHHHHHHTTH---HHHHHHHHHHHHHHHHHHHTTCTTEEEEEE-E-
T ss_pred             ------HHHccCCCCCcCcCCCCCcchhhhhh-hhhhhhhcchh---hhhhccchhHHHHHHHHHHhcCCCeEEEEe-e-
Confidence                  77777665544444444333333333 35665544333   33444444445444433    2321 1111 1 


Q ss_pred             CceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673          404 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI  479 (529)
Q Consensus       404 ~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~  479 (529)
                      ..+.-+.+.....+...+.+.|.+.||.+..         .....||+. |.++   ++++|++++.+.|.++++.
T Consensus       340 Gl~~~i~~~~~~~~~~~~~~~l~~~Gl~~~~---------~~~~~ir~~-Ppl~---it~~~id~~~~~l~~alk~  402 (404)
T d1z7da1         340 GLLCAIEFKNELVNVLDICLKLKENGLITRD---------VHDKTIRLT-PPLC---ITKEQLDECTEIIVKTVKF  402 (404)
T ss_dssp             TTEEEEEECTTTCCHHHHHHHHHHTTEECCE---------ETTTEEEEC-CCTT---CCHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEEcCCcccHHHHHHHHHhCCeEEec---------CCCCEEEEE-CCcC---CCHHHHHHHHHHHHHHHHh
Confidence            1233445544444556677888889998732         124679996 4454   6799999999999998864

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=3.3e-11  Score=123.16  Aligned_cols=312  Identities=15%  Similarity=0.106  Sum_probs=176.3

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---  189 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---  189 (529)
                      +-.|+|.+|+...+.. +..  .. +.+. +....+++    +.+.++.+.+.     ....+||++|+..++....   
T Consensus        57 h~~p~i~~Av~~q~~~-~~~--~~-~~~~-~~~~~~~~----~~~~~~~~~~~-----v~~~~sGseA~e~Aik~ar~~~  122 (404)
T d2byla1          57 HCHPKIVNALKSQVDK-LTL--TS-RAFY-NNVLGEYE----EYITKLFNYHK-----VLPMNTGVEAGETACKLARKWG  122 (404)
T ss_dssp             BTCHHHHHHHHHHHTT-CCC--CC-TTEE-ESSHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHhh-CCC--cc-cccc-cchHHHHH----Hhhhhcccccc-----cccccCccccchhHHHHHHHHh
Confidence            4578999998877643 221  11 1111 12233333    56677777653     2456899999998876531   


Q ss_pred             ------C-CCCEEEEcCCCCCccccccccccccccccccc-----eE-----EEEEcccCCCCCCCCHHHHHHHhhhcCC
Q 009673          190 ------K-PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----YF-----ESMPYRLDESTGLVDYDMLEKTAILFRP  252 (529)
Q Consensus       190 ------~-pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~-----~~-----~~v~~~v~~~~~~iD~d~le~~i~~~~p  252 (529)
                            . ...+++...-.+.|... +      .+...+.     .+     ....++      ..|.+++++.+.+.+.
T Consensus       123 ~~~~~~~~~~~~i~~~~~~~hg~t~-~------~~~~~~~~~~~~~~~p~~~~~~~~p------~~d~~~l~~~l~~~~i  189 (404)
T d2byla1         123 YTVKGIQKYKAKIVFAAGNFWGRTL-S------AISSSTDPTSYDGFGPFMPGFDIIP------YNDLPALERALQDPNV  189 (404)
T ss_dssp             HHTTCCCTTCCEEEEETTCCCCCSH-H------HHTTCCCHHHHTTSCSCCTTEEEEC------TTCHHHHHHHHTSTTE
T ss_pred             hhccccccccccccccCCCcccccc-c------eeccCCCcccccCCCCCCCCeeEec------ccCHHHHHHhcCCCCe
Confidence                  1 22456655433222100 0      0111100     00     011111      3478999999876555


Q ss_pred             cEEEEcCC--CCCC----CCCHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccccC--CCC
Q 009673          253 KLIIAGAS--AYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG--PRG  321 (529)
Q Consensus       253 klIi~~~s--~~p~----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~G--prg  321 (529)
                      .+|++..-  +.+.    ..-+++|+++|++||+++|+|+++ .|+--.+.. . .-+. ..|+++.+  |.++|  ...
T Consensus       190 AaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~-tGfgR~G~~~a~~~~gv~PDi~~~g--K~l~gG~~p~  266 (404)
T d2byla1         190 AAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQ-TGLARTGRWLAVDYENVRPDIVLLG--KALSGGLYPV  266 (404)
T ss_dssp             EEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTT-TTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTSSCC
T ss_pred             EEEEECCccCCCCCccCCHHHHHHHHHHHHhcCeEEEeeccc-cccccccccchhhhcCCCCCEEEEC--chhhCCCccc
Confidence            66777521  2222    223899999999999999999986 343211110 0 0011 35888655  99854  467


Q ss_pred             eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC-
Q 009673          322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG-  400 (529)
Q Consensus       322 G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~-  400 (529)
                      |.+++++      ++.+.+......++.++. ...+++..++|+.+.++.   ..+++.+..+++.+.|.+..-+.+.. 
T Consensus       267 ~av~~~~------~i~~~~~~~~~~~T~~gn-pl~~aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~l~~l~~~~i~~v  336 (404)
T d2byla1         267 SAVLCDD------DIMLTIKPGEHFSTYGGN-PLGCRVAIAALEVLEEEN---LAENADKLGIILRNELMKLPSDVVTAV  336 (404)
T ss_dssp             EEEEECH------HHHTTSCTTSSCCSSTTC-HHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHTSCTTTEEEE
T ss_pred             eeeeech------hhhhccCCCCCCcCCCcC-HHHHHHHHHHHHHHHhcC---chhhhhHhhHHHHHHHHhhccccceee
Confidence            8888887      677766554444444443 334444444677765433   45566666777888887732111111 


Q ss_pred             -CCCCceEEEccC-CCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673          401 -GSDNHLVLVDLR-PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       401 -gt~~~~~~v~~~-~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~  478 (529)
                       +. ..+.-+++. +...+...+...|.+.||.+...         ....||+.-| ++   ++++|++++.+.|++++.
T Consensus       337 Rg~-Gl~~~i~~~~~~~~~~~~~~~~l~~~Gvl~~~~---------~~~~i~l~Pp-L~---it~~~id~~~~~l~~al~  402 (404)
T d2byla1         337 RGK-GLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPT---------HGDIIRFAPP-LV---IKEDELRESIEIINKTIL  402 (404)
T ss_dssp             EEE-TTEEEEEECCCSSCCHHHHHHHHHHTTEECEEE---------ETTEEEECCC-TT---CCHHHHHHHHHHHHHHHH
T ss_pred             eec-ccEEEEEEecCCchhHHHHHHHHHhCCeEEecC---------CCCEEEEECC-cC---CCHHHHHHHHHHHHHHHH
Confidence             11 122223332 22334566777888899987421         2457999744 44   579999999999999876

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=99.31  E-value=1.2e-10  Score=118.23  Aligned_cols=309  Identities=15%  Similarity=0.144  Sum_probs=169.3

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cCC
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP  191 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~p  191 (529)
                      -.|+|.+|+...+.+...  .+.  .+ .++...+   ++ +++.+...-..+   .....+||++|+..++...  ...
T Consensus        54 ~hp~v~~a~~~~~~~~~~--~~~--~~-~~~~~~~---la-~~l~~~~~~~~~---~v~f~~sGseA~e~Aik~Ar~~t~  121 (387)
T d1vefa1          54 GNPEVVEAVKRQAETLMA--MPQ--TL-PTPMRGE---FY-RTLTAILPPELN---RVFPVNSGTEANEAALKFARAHTG  121 (387)
T ss_dssp             TCHHHHHHHHHHHHHCCC--CCT--TS-CCHHHHH---HH-HHHHHTSCTTEE---EEEEESSHHHHHHHHHHHHHHHHS
T ss_pred             CcHHHHHHHHHHHHhhcc--ccc--cc-CCchHHH---HH-HHhhhhccccce---eeccccCchHHHHHHHHHHHhhcc
Confidence            368888888877754321  111  11 1222222   22 333333322211   2345689999999888754  223


Q ss_pred             CCEEEEcCCCCCccccccccccccccccccc-----eE-----EEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC--
Q 009673          192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----YF-----ESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA--  259 (529)
Q Consensus       192 GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~-----~~-----~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~--  259 (529)
                      ..+|+...-.|-|....       .....+.     .+     .+..+|      ..|.|.|++.+.+ +..+||+..  
T Consensus       122 r~~ii~~~~~yHG~t~~-------~~~~s~~~~~~~~~~p~~~~~~~~p------~~d~~~l~~~~~~-~iAavi~EPi~  187 (387)
T d1vefa1         122 RKKFVAAMRGFSGRTMG-------SLSVTWEPKYREPFLPLVEPVEFIP------YNDVEALKRAVDE-ETAAVILEPVQ  187 (387)
T ss_dssp             CCEEEEETTCCCCSSHH-------HHHTCCCHHHHGGGCSCSSCEEEEC------TTCHHHHHHHCCT-TEEEEEECSEE
T ss_pred             cceecccccCCCCCccc-------eEeccCCccccCCCCCCCCCceEeC------CCCHHHHHHhcCC-CeEEEEEECCC
Confidence            46777776544332110       0111110     00     111222      2478999998876 677777752  


Q ss_pred             CCCCCCCC----HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccccC-CCCeEEEeeCCCc
Q 009673          260 SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPV  331 (529)
Q Consensus       260 s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~G-prgG~i~~~~~~~  331 (529)
                      .+.+...+    +++++++|++||+++|+|+++. |+--.|.. . .-+. ..|+++.+  |.++| ...+.+++.+   
T Consensus       188 g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-GfgR~G~~~~~~~~~v~PDi~~~g--K~l~gG~~~~~~~~~~---  261 (387)
T d1vefa1         188 GEGGVRPATPEFLRAAREITQEKGALLILDEIQT-GMGRTGKRFAFEHFGIVPDILTLA--KALGGGVPLGVAVMRE---  261 (387)
T ss_dssp             TTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSTHHHHTCCCSEEEEC--GGGGTTSSCEEEEEEH---
T ss_pred             CCCCCccCCHHHHHHHHHHHHHcCceEEeccccc-ccCccCCCcccccCCcCCceeeec--ccCCCCccccccccce---
Confidence            12222222    8999999999999999999964 33111110 0 0001 36899877  99854 3346666665   


Q ss_pred             chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC--CCCCceEEE
Q 009673          332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG--GSDNHLVLV  409 (529)
Q Consensus       332 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~--gt~~~~~~v  409 (529)
                         +..+.+......++.++... ..++..+.|+.+.+.   +..+++.+..+++.+.|++..-+.+..  +. ..+.-+
T Consensus       262 ---~~~~~~~~~~~g~T~~gnPl-a~aaa~a~L~~l~~~---~~~~~v~~~g~~l~~~L~~l~~~~v~~vrg~-Gl~~~i  333 (387)
T d1vefa1         262 ---EVARSMPKGGHGTTFGGNPL-AMAAGVAAIRYLERT---RLWERAAELGPWFMEKLRAIPSPKIREVRGM-GLMVGL  333 (387)
T ss_dssp             ---HHHHTSCTTSSCCSSTTCHH-HHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTSCCTTEEEEEEE-TTEEEE
T ss_pred             ---eeeeccccCCccccCCCCcc-hhhhcccchhhcccc---cccchHhhhhHHHHHHHHhcCCCceEEEeec-ceEEEE
Confidence               45555544333333444333 333333357766433   345667777888889887732111110  11 123334


Q ss_pred             ccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          410 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       410 ~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      ++...  ....+.+.+.+.|+.+...         .+..||+..| ++   ++++|++++.+.|++++
T Consensus       334 e~~~~--~~~~~~~~~~~~g~l~~~~---------g~~~ir~~Pp-l~---it~~~ld~~~~~i~~aL  386 (387)
T d1vefa1         334 ELKEK--AAPYIARLEKEHRVLALQA---------GPTVIRFLPP-LV---IEKEDLERVVEAVRAVL  386 (387)
T ss_dssp             EESSC--SHHHHHHHHHHHCEECEES---------STTEEEECCC-TT---CCHHHHHHHHHHHHHHH
T ss_pred             EEeCC--chHHHHHHHHHCCCeEEec---------CCCEEEEECC-cc---CCHHHHHHHHHHHHHHh
Confidence            55432  3456777777788876321         2467999744 43   67999999999999886

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=99.25  E-value=2.3e-09  Score=109.99  Aligned_cols=315  Identities=15%  Similarity=0.093  Sum_probs=164.1

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cC
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK  190 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~  190 (529)
                      +-.|+|.+|+...+... ...      ........    .+.+.+.++++...    ......||++|+..++...  ..
T Consensus        68 h~hp~i~~ai~~~~~~~-~~~------~~~~~~~~----~la~~~~~~~~~~~----~v~f~~sGseA~e~Alk~ar~~t  132 (427)
T d2gsaa_          68 HAHPEVIEALKVAMEKG-TSF------GAPCALEN----VLAEMVNDAVPSIE----MVRFVNSGTEACMAVLRLMRAYT  132 (427)
T ss_dssp             BTCHHHHHHHHHHHTTC-SCC------SSCCHHHH----HHHHHHHHHSTTCS----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHhc-Ccc------ccchhHHH----HHHHHHHhhCCccc----cccccCCcHHHHHHHHHHHHHhc
Confidence            34789999998777432 111      11122222    23356666665432    1234579999999888744  22


Q ss_pred             CCCEEEEcCCCCCccccccccccccccccccceEEEE--------EcccCCC---CCCCCHHHHHHHhhhc--CCcEEEE
Q 009673          191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESM--------PYRLDES---TGLVDYDMLEKTAILF--RPKLIIA  257 (529)
Q Consensus       191 pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v--------~~~v~~~---~~~iD~d~le~~i~~~--~pklIi~  257 (529)
                      -..+|+..+-.|-|.-. +      .+...+......        ..+..++   ....|++.+++++.++  +..+||+
T Consensus       133 ~r~~ii~~~~~yHG~t~-~------~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~iaavi~  205 (427)
T d2gsaa_         133 GRDKIIKFEGCYHGHAD-M------FLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVIL  205 (427)
T ss_dssp             CCCEEEEETTCCCCSCG-G------GCSSCCHHHHHTTCCSCSSSCHHHHTTEEEECTTCHHHHHHHHTTSTTTEEEEEE
T ss_pred             CCCeEEEEecccccCcc-e------eeeecCCcccccCCCCCCCCcccCccceeccCcchHHHHHHHHHhCCCCeEEEEE
Confidence            34677777655422210 1      111111000000        0000000   0145899999999863  3346666


Q ss_pred             cC--CCCCCCCC----HHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEeccccccc-CCCCeEEEee
Q 009673          258 GA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGMIFFK  327 (529)
Q Consensus       258 ~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l~-GprgG~i~~~  327 (529)
                      ..  .+.+...+    +++|+++|++||+++|+|++| .|+- .+...  .-++ ..|+++.+  |.+. |...|.++++
T Consensus       206 Epi~g~~G~~~~~~~~l~~l~~lc~~~~~llI~DEv~-tG~r-~g~~~~~~~~gi~PDi~~~g--K~lggG~p~~a~~~~  281 (427)
T d2gsaa_         206 EPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVM-TGFR-IAYGGVQEKFGVTPDLTTLG--KIIGGGLPVGAYGGK  281 (427)
T ss_dssp             CSSBCSSSCBCCCTTHHHHHHHHHHHTTCEEEEECTT-TBTT-TBTTCHHHHTTCCCSEEEEC--GGGGTTSCCEEEEEC
T ss_pred             cCCcCCCCCccCCHHHHHHHHHHHHHhceeeeecccc-ccce-ecccchHHhcCCCHHHHhhh--hccCCCcceeeeeeh
Confidence            52  12222333    999999999999999999997 4542 22110  0011 36898877  8874 4444677777


Q ss_pred             CCCcchhHHHhhhccc--ccC-CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cCcEEecC
Q 009673          328 KDPVLGVELESAINNA--VFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLVSG  400 (529)
Q Consensus       328 ~~~~~~~~l~~~i~~~--~~p-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~~v~~~  400 (529)
                      +      ++.+.+...  .+. ++.++ +...++|..++|+.+.+.++   .+++.++.++|.+.|++    .+......
T Consensus       282 ~------~i~~~~~~~~~~~~~~T~~g-npla~AAala~Le~i~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~~~~v~  351 (427)
T d2gsaa_         282 R------EIMQLVAPAGPMYQAGTLSG-NPLAMTAGIKTLELLRQPGT---YEYLDQITKRLSDGLLAIAQETGHAACGG  351 (427)
T ss_dssp             H------HHHTTBTTTSSBCCCCTTTT-CHHHHHHHHHHHHHHTSTTH---HHHHHHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred             H------HHHHHhcccCCCcCCCCCCC-CchhhHHHHHhhHHhhhhhH---HhhhhHHHHHHHHHHHHHHhhcCCCcEEc
Confidence            7      676665432  111 22333 33344444457887765443   45566666667666654    34322211


Q ss_pred             CCCCceEEEccCCC--------CCcH---HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHH
Q 009673          401 GSDNHLVLVDLRPM--------GIDG---ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI  469 (529)
Q Consensus       401 gt~~~~~~v~~~~~--------~i~~---~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~l  469 (529)
                      +....+.+.-....        ..+.   ..+...|.+.||.+.    |+..     ..+-++   +   -++++|++++
T Consensus       352 ~~ggm~~i~~~~~~v~~~~~~~~~d~~~~~~~~~~ll~~Gv~l~----p~~~-----~~~~~~---l---~~Te~dId~~  416 (427)
T d2gsaa_         352 QVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLA----PSQF-----EAGFTS---L---AHTEEDIDAT  416 (427)
T ss_dssp             EETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECC----SSTT-----SCEECC---T---TCCHHHHHHH
T ss_pred             ccCCeEEEEEeccCCCCHHHhhcccHHHHHHHHHHHHHCCEEEC----CCCC-----cceeCC---C---CCCHHHHHHH
Confidence            11111111111100        0111   234556668899873    2210     111122   2   2679999999


Q ss_pred             HHHHHHHHH
Q 009673          470 ADFIHEGVE  478 (529)
Q Consensus       470 a~~i~~~~~  478 (529)
                      .++++++++
T Consensus       417 l~al~~al~  425 (427)
T d2gsaa_         417 LAAARTVMS  425 (427)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHH
Confidence            999998875

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=99.17  E-value=1.6e-08  Score=103.53  Aligned_cols=333  Identities=14%  Similarity=0.029  Sum_probs=167.1

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cC
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK  190 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~  190 (529)
                      +-+|+|.+|+...+.. +....+.   ...++..   . ...+++.+++.-+..+  ......|||+|+..++...  ..
T Consensus        56 h~~p~i~~ai~~q~~~-~~~~~~~---~~~~~~~---~-~la~~l~~~~p~~~~~--~v~f~~sGseA~e~Alk~ar~~t  125 (425)
T d1sffa_          56 HLHPKVVAAVEAQLKK-LSHTCFQ---VLAYEPY---L-ELCEIMNQKVPGDFAK--KTLLVTTGSEAVENAVKIARAAT  125 (425)
T ss_dssp             BTCHHHHHHHHHHTTT-CSCCCTT---TEECHHH---H-HHHHHHHHHSSCSSCE--EEEEESSHHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHhh-cCCcccc---cccCcHH---H-HHHHHHHhhhhhcccc--eeeeeccccchhhhHHHHhhhhh
Confidence            3579999999876642 2221111   1112211   2 2336777777543211  1244589999999887643  22


Q ss_pred             CCCEEEEcCCCCCccccc-----ccccccc-ccccccceEEEEEcccCCCC-CCCC-HHHHHHHhh----hcCCcEEEEc
Q 009673          191 PHDRIMGLDLPHGGHLSH-----GFMTPKR-RVSGTSIYFESMPYRLDEST-GLVD-YDMLEKTAI----LFRPKLIIAG  258 (529)
Q Consensus       191 pGD~Vl~~~~~~~g~~s~-----g~~~~~~-~i~~~g~~~~~v~~~v~~~~-~~iD-~d~le~~i~----~~~pklIi~~  258 (529)
                      .-.+|+...-.|-|....     +...... ............+++..... ...+ .+..++...    ..+..+|++.
T Consensus       126 ~r~~ii~~~~~yHG~t~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vaavi~E  205 (425)
T d1sffa_         126 KRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIE  205 (425)
T ss_dssp             TCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEEC
T ss_pred             cccceEeecCCCcCccccchhhcCCCCcccCCcccccCCccccCCccccccccchhhHHHHHHHHHhcccccceEEEEec
Confidence            335677766543222110     0000000 00000111122222221111 1111 111112111    1234567765


Q ss_pred             C--CCCCC-C---CCHHHHHHHHHHhCCEEEEeccccccc--ccccccCCCCC-cccEEEeccccccc-CCCCeEEEeeC
Q 009673          259 A--SAYPR-D---FDYPRMRQIADAVGALLMMDMAHISGL--VAASVVADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKK  328 (529)
Q Consensus       259 ~--s~~p~-~---~d~~~i~~ia~~~g~~livD~ah~~Gl--i~~~~~~~~~~-~aDiv~~S~hK~l~-GprgG~i~~~~  328 (529)
                      .  .+.+. .   .-++.|+++|++||+++|+|+++. |+  .........+. ..|+++.+  |.++ |...|.+++++
T Consensus       206 Pi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~t-G~gR~g~~~a~~~~gv~PDi~~~g--K~l~gG~P~~av~~~~  282 (425)
T d1sffa_         206 PVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQS-GAGRTGTLFAMEQMGVAPDLTTFA--KSIAGGFPLAGVTGRA  282 (425)
T ss_dssp             SBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTSCCSEEEEC--GGGGTSSCCEEEEEEH
T ss_pred             CccCCCCcccCCHHHHHHHHHHHHHcCceEEeccccc-cCCCcchhhHHHhcCCCccceecc--cccCCCcceEEEEEcH
Confidence            2  12222 1   238899999999999999999965 43  21111111111 46998866  9995 45568888888


Q ss_pred             CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cCcEEecCCCCC
Q 009673          329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLVSGGSDN  404 (529)
Q Consensus       329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~~v~~~gt~~  404 (529)
                            ++.+.+......++.++... .++|..++|+.+.+..+   .+++....+++.+.|++    .++.....+. .
T Consensus       283 ------~i~~~~~~~~~~~T~~gnpl-~~aaa~a~L~~i~~~~~---~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~-G  351 (425)
T d1sffa_         283 ------EVMDAVAPGGLGGTYAGNPI-ACVAALEVLKVFEQENL---LQKANDLGQKLKDGLLAIAEKHPEIGDVRGL-G  351 (425)
T ss_dssp             ------HHHTTSCTTSBCCSSSSCHH-HHHHHHHHHHHHHHTTH---HHHHHHHHHHHHHHHHHHHHTCTTEEEEEEE-T
T ss_pred             ------HHHHhhCCCCCCCCCCcCHH-HHHHHHHHHHHHHHhhh---hhhhhhhhhhhhhhhhhhHhhCCceEEEEcc-c
Confidence                  67666654443344444333 44443446777654443   34444445555555544    3331111111 1


Q ss_pred             ceEEEccC---CCC-Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673          405 HLVLVDLR---PMG-ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV  477 (529)
Q Consensus       405 ~~~~v~~~---~~~-i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~  477 (529)
                      .+.-+.+.   ... .+   ...+.+.|.+.||.+....       .....||+..| ++   ++++|++++.+++++++
T Consensus       352 l~~~i~f~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~g-------~~~n~i~~~Pp-L~---it~~eid~~l~~l~~al  420 (425)
T d1sffa_         352 AMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCG-------PYYNVLRILVP-LT---IEDAQIRQGLEIISQCF  420 (425)
T ss_dssp             TEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEES-------TTSCEEEECCC-TT---CCHHHHHHHHHHHHHHH
T ss_pred             cEEEEEEeccCccCCccHHHHHHHHHHHHHCCCEEeccC-------CCCCEEEEECC-CC---CCHHHHHHHHHHHHHHH
Confidence            12222221   111 12   2346667778999874321       12467999854 43   67999999999999988


Q ss_pred             HHH
Q 009673          478 EIT  480 (529)
Q Consensus       478 ~~~  480 (529)
                      +..
T Consensus       421 ~ei  423 (425)
T d1sffa_         421 DEA  423 (425)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            753

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=99.09  E-value=5.1e-08  Score=99.68  Aligned_cols=325  Identities=15%  Similarity=0.116  Sum_probs=172.6

Q ss_pred             CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673          114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----  189 (529)
Q Consensus       114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all----  189 (529)
                      -+|.|.+|+...+.. ......+ .+  .+   +...+++ +++.+......+   .....+||++|+..++....    
T Consensus        60 ~~p~i~~Ai~~q~~~-~~~~~~~-~~--~~---~~~~~l~-~~l~~~~~~~~~---~v~f~~sGseA~e~A~k~ar~~~~  128 (429)
T d1s0aa_          60 NHPQLNAAMKSQIDA-MSHVMFG-GI--TH---APAIELC-RKLVAMTPQPLE---CVFLADSGSVAVEVAMKMALQYWQ  128 (429)
T ss_dssp             SCHHHHHHHHHHHHH-CSCCCCS-SE--EC---HHHHHHH-HHHHHHSCTTCC---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHh-cCCcccC-Cc--cc---hHHHHHH-HHHHhhhccCcc---eeeeccccccchhhhhhhhhheee
Confidence            479999998876643 2221111 11  11   1222233 556666655433   23456899999987775431    


Q ss_pred             ---CCCCEEEEcCCCCCccccccc-----ccccccc-ccccceEEEEEcccCCCCC---CCCHHHHHHHhhhc--CCcEE
Q 009673          190 ---KPHDRIMGLDLPHGGHLSHGF-----MTPKRRV-SGTSIYFESMPYRLDESTG---LVDYDMLEKTAILF--RPKLI  255 (529)
Q Consensus       190 ---~pGD~Vl~~~~~~~g~~s~g~-----~~~~~~i-~~~g~~~~~v~~~v~~~~~---~iD~d~le~~i~~~--~pklI  255 (529)
                         .+..+|+...-.|-|......     ....... ..........+.+......   ..+.+++++.+...  +..+|
T Consensus       129 ~~g~~~~~ii~~~~~yHG~t~~a~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaav  208 (429)
T d1s0aa_         129 AKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAV  208 (429)
T ss_dssp             HHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEE
T ss_pred             cccccccEEEEecCCccccchhhhhhcCCccccccccCccccccccccccccccccccchhhhhhhhhhhhhcCCcccee
Confidence               344688887755422210000     0000000 0000001111211111112   23455555555442  34566


Q ss_pred             EEcCC--CCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEEEeccccccc-C-CCCeE
Q 009673          256 IAGAS--AYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLR-G-PRGGM  323 (529)
Q Consensus       256 i~~~s--~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv~~S~hK~l~-G-prgG~  323 (529)
                      ++...  +.+.  ..   -+++|+++|++||+++|+|+.+. |+--.+..  ...+. -.|+++.+  |.+. | ...|.
T Consensus       209 ivEPi~~~~gg~~~~~~~fl~~lr~lc~~~gillI~DEV~t-GfGRtG~~~~~~~~~v~PDi~~~g--K~l~gG~~p~~a  285 (429)
T d1s0aa_         209 IIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIAT-GFGRTGKLFACEHAEIAPDILCLG--KALTGGTMTLSA  285 (429)
T ss_dssp             EECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEEC--GGGGTSSSCCEE
T ss_pred             eecceeccCCCccCCCHHHHHHHHHHHHHcCcceehhhccc-cccccccccccccceecccccccc--cccccccccccc
Confidence            66532  2222  12   28899999999999999999864 43111110  00011 36898877  9883 4 46688


Q ss_pred             EEeeCCCcchhHHHhhhccc-----ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEE
Q 009673          324 IFFKKDPVLGVELESAINNA-----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKL  397 (529)
Q Consensus       324 i~~~~~~~~~~~l~~~i~~~-----~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v  397 (529)
                      +++++      ++.+.+...     ....+.++ +...+++..+.|+.+.+++   ..+++.+..++|.+.|++. ....
T Consensus       286 v~~~~------~i~~~~~~~~~~~~~~~~T~~g-np~~~aaa~a~L~~i~~~~---~~~~~~~~g~~l~~~L~~l~~~~~  355 (429)
T d1s0aa_         286 TLTTR------EVAETISNGEAGCFMHGPTFMG-NPLACAAANASLAILESGD---WQQQVADIEVQLREQLAPARDAEM  355 (429)
T ss_dssp             EEECH------HHHHHHHTSTTSSCSCCCTTTT-CHHHHHHHHHHHHHHHTCH---HHHHHHHHHHHHHHHHGGGGGCTT
T ss_pred             hhhHH------HHHhccCCCCCcceeecCCCCC-Ccccchhhhcccccccccc---ccchhhHHHHHHHHHHHHhccCCc
Confidence            88887      666655321     11223333 3334444444677776644   4566666677888888653 1111


Q ss_pred             ecC--CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673          398 VSG--GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE  475 (529)
Q Consensus       398 ~~~--gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~  475 (529)
                      +..  +. ..+.-+++... .+...+.+.|.+.|+.+..    .      ...||+.-| ++   ++++|++++.++|++
T Consensus       356 v~~vrg~-Gl~~~~e~~~~-~~~~~~~~~~~~~Gl~~~~----~------g~~i~~~Pp-l~---it~~eid~~~~~l~~  419 (429)
T d1s0aa_         356 VADVRVL-GAIGVVETTHP-VNMAALQKFFVEQGVWIRP----F------GKLIYLMPP-YI---ILPQQLQRLTAAVNR  419 (429)
T ss_dssp             EEEEEEE-TTEEEEEESSC-BCHHHHHHHHHHTTEECCC----B------TTEEEECCC-TT---CCHHHHHHHHHHHHH
T ss_pred             eEEEeec-ccEEEEEecCc-ccHHHHHHHHHHCCcEEEe----c------CCEEEEeCC-cC---CCHHHHHHHHHHHHH
Confidence            111  11 12333455432 2456788888889999732    1      357999744 44   579999999999998


Q ss_pred             HHH
Q 009673          476 GVE  478 (529)
Q Consensus       476 ~~~  478 (529)
                      +++
T Consensus       420 al~  422 (429)
T d1s0aa_         420 AVQ  422 (429)
T ss_dssp             HTS
T ss_pred             HHH
Confidence            875

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=99.06  E-value=3.5e-08  Score=101.11  Aligned_cols=331  Identities=15%  Similarity=0.121  Sum_probs=158.9

Q ss_pred             CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cC
Q 009673          113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK  190 (529)
Q Consensus       113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~  190 (529)
                      +-.|+|.+|+...+.. +.....  .+ . ++   ...+++ +++.+++.-..+   .....+|||+|+..++...  ..
T Consensus        57 h~~p~v~~ai~~q~~~-~~~~~~--~~-~-~~---~~~~la-~~L~~~~~~~~~---~v~f~~sGseA~e~Alk~Ar~~t  124 (431)
T d1zoda1          57 HCHPEIVSVIGEYAGK-LDHLFS--EM-L-SR---PVVDLA-TRLANITPPGLD---RALLLSTGAESNEAAIRMAKLVT  124 (431)
T ss_dssp             BTCHHHHHHHHHHHHH-CCCCCT--TC-C-CH---HHHHHH-HHHHHHSCTTCC---EEEEESCHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHhh-cccccc--cc-c-cH---HHHHHH-HHHHHhCCcccc---eeeecccccchHHHHHHHHHHhc
Confidence            3478999998877743 322111  11 1 12   122233 566666632222   1245689999999888753  22


Q ss_pred             CCCEEEEcCCCCCccccc----ccccccc--ccccccceEEEEEcccC--CCC----CCCC---HHHHHHHhhhc---CC
Q 009673          191 PHDRIMGLDLPHGGHLSH----GFMTPKR--RVSGTSIYFESMPYRLD--EST----GLVD---YDMLEKTAILF---RP  252 (529)
Q Consensus       191 pGD~Vl~~~~~~~g~~s~----g~~~~~~--~i~~~g~~~~~v~~~v~--~~~----~~iD---~d~le~~i~~~---~p  252 (529)
                      ..++|+...-.|-|....    .......  .....+  ...++.+..  +..    ...+   .+.+...+...   +.
T Consensus       125 ~r~~i~~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  202 (431)
T d1zoda1         125 GKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVG--SFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNL  202 (431)
T ss_dssp             TCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTT--EEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCE
T ss_pred             CCcceeecccccccccchhhcccccccccccCCcccC--ceeeeeecccccccccccchhhhhhHHHHHHHHHHhccccc
Confidence            346777765443221000    0000000  000111  122222221  110    1112   23333333322   23


Q ss_pred             cEEEEcC--CCCCC----CCCHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEeccccccc-CCCCe
Q 009673          253 KLIIAGA--SAYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR-GPRGG  322 (529)
Q Consensus       253 klIi~~~--s~~p~----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~-GprgG  322 (529)
                      .+|++..  .+.+.    ..-+++|+++|++||+++|+|+.+. |+--.|.. . .-+. ..|+++.+  |.++ |...+
T Consensus       203 Aavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~t-G~gRtG~~~~~~~~gv~PDi~~~g--K~l~gG~p~~  279 (431)
T d1zoda1         203 AAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQT-GVGRTGTMFACQRDGVTPDILTLS--KTLGAGLPLA  279 (431)
T ss_dssp             EEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSTHHHHTCCCSEEEEC--HHHHTTSSCE
T ss_pred             cceeeccccccCCccCCCHHHHHHHHHHHHhcCceEEeccccc-cccccccccccccCCCCcchhccc--cccccccccc
Confidence            4566642  12222    2238999999999999999999965 43211110 0 0001 36898877  9884 44445


Q ss_pred             EEEeeCCCcchhHHHhhhcccc--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cCcE
Q 009673          323 MIFFKKDPVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYK  396 (529)
Q Consensus       323 ~i~~~~~~~~~~~l~~~i~~~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~~  396 (529)
                      .+++.+      +..+......  ...+.++ +....++..+.++.+..+.+   .+++.+..+++.+.|++    .++.
T Consensus       280 av~~~~------~~~~~~~~~~~~~~~T~~g-~pl~~aaa~a~l~~i~~~~~---~~~~~~~g~~l~~~l~~~~~~~~~i  349 (431)
T d1zoda1         280 AIVTSA------AIEERAHELGYLFYTTHVS-DPLPAAVGLRVLDVVQRDGL---VARANVMGDRLRRGLLDLMERFDCI  349 (431)
T ss_dssp             EEEECH------HHHHHHHHTTCCCCCTTTT-CHHHHHHHHHHHHHHHHTTH---HHHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred             eeeeee------cchhhhhcccccccCCCCC-CcchHHHHHHHHHHhhhhhh---hHHHHHHHHHHhhhhhhhhhcCCCe
Confidence            566655      3444332221  1222333 33334443345665554433   34444444445444433    3332


Q ss_pred             EecCCCCCceEEEccC---C----CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHH
Q 009673          397 LVSGGSDNHLVLVDLR---P----MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI  469 (529)
Q Consensus       397 v~~~gt~~~~~~v~~~---~----~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~l  469 (529)
                      .-..|.. -+.-+++.   .    ...-...+.+.|.+.|+..+....++     ....||+.-| ++   ++++|++++
T Consensus       350 ~~vrG~G-lm~~ie~~~~~~~~~~~~~~~~~i~~~~~~~Gl~~~~~~~~~-----~~~~i~l~Pp-l~---it~~eid~~  419 (431)
T d1zoda1         350 GDVRGRG-LLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPG-----MGGVFRIAPP-LT---VSEDEIDLG  419 (431)
T ss_dssp             EEEEEET-TEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTT-----SCCEEEECCC-TT---CCHHHHHHH
T ss_pred             EEEeecc-eEEEEEEecCCcccCccHHHHHHHHHHHHHhCcccCeeeecC-----CCCEEEEECC-CC---CCHHHHHHH
Confidence            1111111 12112221   1    01113556777888898753221221     2457999754 44   579999999


Q ss_pred             HHHHHHHHHHH
Q 009673          470 ADFIHEGVEIT  480 (529)
Q Consensus       470 a~~i~~~~~~~  480 (529)
                      .++|.++++..
T Consensus       420 ~~~l~~al~~v  430 (431)
T d1zoda1         420 LSLLGQAIERA  430 (431)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99999998753

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.93  E-value=5.5e-08  Score=100.39  Aligned_cols=206  Identities=15%  Similarity=0.142  Sum_probs=113.6

Q ss_pred             HHHHHHHhhh-----cCCcEEEEcCC-CCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccc----cCCCCC-
Q 009673          240 YDMLEKTAIL-----FRPKLIIAGAS-AYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV----VADPFK-  303 (529)
Q Consensus       240 ~d~le~~i~~-----~~pklIi~~~s-~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~----~~~~~~-  303 (529)
                      ++++++.+..     .+..+|++..- ...+  ..+   +++|+++|++||++||+|+++. |+--.|.    ....+. 
T Consensus       232 ~~~l~~~~~~~~~~~~~iAavivEPi~g~~G~~~~~~~fl~~lr~lc~~~gillI~DEV~t-G~gRtG~~~~~e~~gi~~  310 (461)
T d1ohwa_         232 LEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQT-GGGSTGKFWAHEHWGLDD  310 (461)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTT-CSSTTSSSSGGGGGCCSS
T ss_pred             HHHHHHHHHHHHhCCCccceeeeccccccccccCchhhHHHHHHHHHHhhCcceecccccc-cccccccccccccccccc
Confidence            4556655532     13446777532 1222  222   8899999999999999999964 3211111    011111 


Q ss_pred             cccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673          304 YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC  383 (529)
Q Consensus       304 ~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a  383 (529)
                      ..|+++.+  |.+.|   |++....      .+. ........++.++... ..++..++|+.+.++.   ..+++.+..
T Consensus       311 ~PDiv~~g--K~l~~---g~~~~~~------~~~-~~~~~~~~~T~~g~p~-~~aaa~a~l~~i~~~~---l~~~~~~~g  374 (461)
T d1ohwa_         311 PADVMTFS--KKMMT---GGFFHKE------EFR-PNAPYRIFNTWLGDPS-KNLLLAEVINIIKRED---LLSNAAHAG  374 (461)
T ss_dssp             CCSEEEEC--GGGSS---EEEEECG------GGS-CSSTTSSCCSCSSCHH-HHHHHHHHHHHHHHTT---HHHHHHHHH
T ss_pred             Cchhhhhh--hcccc---ccccccc------ccc-cccccccccccccccc-cchhhcccchhhhhhh---HHHHHHHHH
Confidence            26888765  97743   4544443      221 1111222233333233 3333334677665433   455666666


Q ss_pred             HHHHHHHHhc-----C-cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCc
Q 009673          384 RALASRLVEL-----G-YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMT  457 (529)
Q Consensus       384 ~~l~~~L~~~-----G-~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~t  457 (529)
                      ++|.+.|++.     . +.-+.+ . ..+.-+++.... ...++.+.|.+.||.+...         .+..||+. |.++
T Consensus       375 ~~l~~~l~~l~~~~~~~i~~vrG-~-Gl~~~ie~~~~~-~~~~i~~~~~~~Gll~~~~---------~~~~ir~~-PpL~  441 (461)
T d1ohwa_         375 KVLLTGLLDLQARYPQFISRVRG-R-GTFCSFDTPDES-IRNKLISIARNKGVMLGGC---------GDKSIRFR-PTLV  441 (461)
T ss_dssp             HHHHHHHHHHHHHCTTTCEEEEE-E-TTEEEEECSSHH-HHHHHHHHHHHTTEECEEE---------TTTEEECC-CCTT
T ss_pred             HHHHHHHHHHHhhCCCceEEeee-e-eEEEEEEcCCHH-HHHHHHHHHHHCCeEEeeC---------CCCEEEEe-CCcC
Confidence            7777777652     1 111111 1 123334554221 2345777888899987431         24679997 5555


Q ss_pred             cCCCCHHHHHHHHHHHHHHHH
Q 009673          458 TRGFSEKEFVAIADFIHEGVE  478 (529)
Q Consensus       458 t~g~~~~d~~~la~~i~~~~~  478 (529)
                         ++++|++.+.++|.+++.
T Consensus       442 ---it~~eid~~~~~l~~~l~  459 (461)
T d1ohwa_         442 ---FRDHHAHLFLNIFSDILA  459 (461)
T ss_dssp             ---CCHHHHHHHHHHHHHHHH
T ss_pred             ---CCHHHHHHHHHHHHHHHh
Confidence               579999999999999886