Citrus Sinensis ID: 009701

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------53
MSFEDSDKKPIAVGPWGGQNGTRWDDGVHTTVRQLVIAHGAGIDSIQIEYDNKGGSCWSEKHGGNGGTKFDQVKLDDPDEFLTSVHGHYGATNDRGSVFVRSLTFQSNRKTYGPFGVEQGTYFSFPMTGGKIVGFHGRCGWYLDAIGIYLKSVVKKVSSNTKAMLQTQNYYTTQNEKTGYSLVQGSVGENYDIVLAVRQKDSFGNSLPSVVSKQKDSFRKTLPVEVSKQKKSSSSSSSSDDSSDDEKDKKRGGGKVPPKVDGAITYGPWGGTGGSMFNDGTYTGIRQINLSRNVGIVSMKVCYDQDGKAVWGSKHGGTGGFRHDRVIFDYPYEILTQITGTYGPVMYMGPNIIRSLTFHTTKGKHGPFGEEQGQSFSNKIGEGKIVGFHGRDGLFLDAIGVYVKVGMVTPATHPVSNAIVRADTPIAEIDNPQWSNKLLVAKQGVPEEVACGVIKEPAPCGPGPWGGDGGRAWDDGVFSGIKQIFVTRAEAVHSIQIEYDRNGQFIWSVKHGGNGGTYTHRVMIRLTS
ccccccccccEEEccccccccccccccccccEEEEEEEEccEEEEEEEEEEcccccEEEcccccccccccEEEcccccccEEEEEEEEEEEEcccccEEEEEEEEEEcccEEEccccccccEEEEcccccEEEEEEEEccccccEEEEEEEcccccccccccccccccccccccccccccEEEEcccccccccEEEEEEEccccccccEEEcccccccccccccEEcccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccEEEEEEEEccEEEEEEEEEEccccEEEccccccccccccEEEEEccccccEEEEEEEEEEEEcccccEEEEEEEEEccccccccccccccEEEEEccccEEEEEEEEccccccEEEEEEEcccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccEEEEEEEEccEEEEEEEEEEccccEEEccccccccccEEEEEEEEccc
ccccccccccEEEEEEEccccEEEEcccccEEEEEEEEEcccEEEEEEEEEEccEEEEcccEccccccEEccEEcccccccEEEEEEEEEccEEccEEEEEEEEEEEcccEEEEEcccccEEEEEEEEEcEEEEEEEEEcccEEEEEEEEEccccccccccccccccccccccccccccccEEEEEEEccccEEEEEEccccEEEEEEEEEccccccEEEEEEEEEcccccccccccccccEEEEEccccEEEEcccccccccEEEEEEEccccEEEEcccccEEEEEEEEEcccEEEEEEEEEEccEEEEcccEccccccEEccEEcccccccEEEEEEEEEEccEccEEEEEEEEEEEcccEEEEEEccccEEEEEEccccEEEEEEEEEcccEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccEEEEcccccEEEEEEEEEcccEEEEEEEEEEccEEEEcccEcccccccEEEEEEEccc
msfedsdkkpiavgpwggqngtrwddgvHTTVRQLVIAHgagidsiqieydnkggscwsekhggnggtkfdqvklddpdefltsvhghygatndrgsVFVRSLtfqsnrktygpfgveqgtyfsfpmtggkivgfhgrcGWYLDAIGIYLKSVVKKVSSNTKAMLQTQNYyttqnektgyslvqgsvgenYDIVLAVRqkdsfgnslpsvvskqkdsfrktlpvevskqkkssssssssddssddekdkkrgggkvppkvdgaitygpwggtggsmfndgtytgirqinlsrNVGIVSMKVcydqdgkavwgskhggtggfrhdrvifdypYEILTQItgtygpvmymgpniirsltfhttkgkhgpfgeeqgqsfsnkigegkivgfhgrdglfLDAIGVYVKVGmvtpathpvsnaivradtpiaeidnpqwsnKLLVAkqgvpeevacgvikepapcgpgpwggdggrawddgvFSGIKQIFVTRAEAVHSIQIeydrngqfiwsvkhggnggtyTHRVMIRLTS
msfedsdkkpiavgpwggqngtrWDDGVHTTVRQLVIAHGAGIDSIQIEYDNKGGSCWSEKHGGNGGTKFDQVKLDDPDEFLTSVHGhygatndrgsVFVRSLTFQSNRKTYGPFGVEQGTYFSFPMTGGKIVGFHGRCGWYLDAIGIYLKSVVKKVSSNTKAMLQTQNYYTTQNEKTGYSLVQGSVGENYDIVLAVRQkdsfgnslpsvvskqkdsfrktlpvevskqkkssssssssddssddekdkkrgggkvppkvdgaitygpwggtgGSMFNDGTYTGIRQINLSRNVGIVSMKVCYDQDGKAVWGSKHGGTGGFRHDRVIFDYPYEILTQITGTYGPVMYMGPNIIRSLTFHTTKGKHGPFGEEQGQSFSNKIGEGKIVGFHGRDGLFLDAIGVYVKVGMVTPATHPVSNAIVRADTPIAEIDNPQWSNKLLVAKQGVPEEVACGVIKEPAPCGPGPWGGDGGRAWDDGVFSGIKQIFVTRAEAVHSIQIEYDRNGQFIWSVkhggnggtytHRVMIRLTS
MSFEDSDKKPIAVGPWGGQNGTRWDDGVHTTVRQLVIAHGAGIDSIQIEYDNKGGSCWSEKHGGNGGTKFDQVKLDDPDEFLTSVHGHYGATNDRGSVFVRSLTFQSNRKTYGPFGVEQGTYFSFPMTGGKIVGFHGRCGWYLDAIGIYLksvvkkvssNTKAMLQTQNYYTTQNEKTGYSLVQGSVGENYDIVLAVRQKDSFGNSLPSVVSKQKDSFRKTLPVEVskqkkssssssssddssddekdkkrgggkvppkvdgAITYGPWGGTGGSMFNDGTYTGIRQINLSRNVGIVSMKVCYDQDGKAVWGSKHGGTGGFRHDRVIFDYPYEILTQITGTYGPVMYMGPNIIRSLTFHTTKGKHGPFGEEQGQSFSNKIGEGKIVGFHGRDGLFLDAIGVYVKVGMVTPATHPVSNAIVRADTPIAEIDNPQWSNKLLVAKQGVPEEVACGVIKEpapcgpgpwggdggrawddgVFSGIKQIFVTRAEAVHSIQIEYDRNGQFIWSVKHGGNGGTYTHRVMIRLTS
***********AVGPWGGQNGTRWDDGVHTTVRQLVIAHGAGIDSIQIEYDNKGGSCWSEKHGGNGGTKFDQVKLDDPDEFLTSVHGHYGATNDRGSVFVRSLTFQSNRKTYGPFGVEQGTYFSFPMTGGKIVGFHGRCGWYLDAIGIYLKSVVKKVSSNTKAMLQTQNYYTTQNEKTGYSLVQGSVGENYDIVLAVRQ*************************************************************DGAITYGPWGGTGGSMFNDGTYTGIRQINLSRNVGIVSMKVCYDQDGKAVWGSKHGGTGGFRHDRVIFDYPYEILTQITGTYGPVMYMGPNIIRSLTFHTTK****************KIGEGKIVGFHGRDGLFLDAIGVYVKVGMVTPATHPVSNAIVRADTPIAEIDNPQWSNKLLVAKQGVPEEVACGVIKEPAPCGPGPWGGDGGRAWDDGVFSGIKQIFVTRAEAVHSIQIEYDRNGQFIWSVKHGGNGGTYTHRVMIR***
****************GGQNGTRWDDGVHTTVRQLVIAHGAGIDSIQIEYDNKGGSCWSEKHGGNGGTKFDQVKLDDPDEFLTSVHGHYGATNDRGSVFVRSLTFQSNRKTYGPFGVEQGTYFSFPMTGGKIVGFHGRCGWYLDAIGIYLKSVVKKVSS*TKA**QTQNYYTTQNEKTGYSLVQGSVGENYDIVLAVRQKDSFGNSLP***********************************D*EKDKKRGG*****************GTGGSMFNDGTYTGIRQINLSRNVGIVSMKVCYDQDGKAVWGSKHGGTGGFRHDRVIFDYPYEILTQITGTYGPVMYMGPNIIRSLTFHTTKGKHGPFGEEQGQSFSNKIGEGKIVGFHGRDGLFLDAIGVYVKVGM****************************************EVACGVIKEPAPCGPGPWGGDGGRAWDDGVFSGIKQIFVTRAEAVHSIQIEYDRNGQFIWSVKHGGNGGTYTHRVMIRLT*
********KPIAVGPWGGQNGTRWDDGVHTTVRQLVIAHGAGIDSIQIEYDNKGGSCWSEKHGGNGGTKFDQVKLDDPDEFLTSVHGHYGATNDRGSVFVRSLTFQSNRKTYGPFGVEQGTYFSFPMTGGKIVGFHGRCGWYLDAIGIYLKSVVKKVSSNTKAMLQTQNYYTTQNEKTGYSLVQGSVGENYDIVLAVRQKDSFGNS**************************************************PPKVDGAITYGPWGGTGGSMFNDGTYTGIRQINLSRNVGIVSMKVCYDQDGKAVWGSKHGGTGGFRHDRVIFDYPYEILTQITGTYGPVMYMGPNIIRSLTFHTTKGKHGPFGEEQGQSFSNKIGEGKIVGFHGRDGLFLDAIGVYVKVGMVTPATHPVSNAIVRADTPIAEIDNPQWSNKLLVAKQGVPEEVACGVIKEPAPCGPGPWGGDGGRAWDDGVFSGIKQIFVTRAEAVHSIQIEYDRNGQFIWSVKHGGNGGTYTHRVMIRLTS
*******KKPIAVGPWGGQNGTRWDDGVHTTVRQLVIAHGAGIDSIQIEYDNKGGSCWSEKHGGNGGTKFDQVKLDDPDEFLTSVHGHYGATNDRGSVFVRSLTFQSNRKTYGPFGVEQGTYFSFPMTGGKIVGFHGRCGWYLDAIGIYLKSVVKKVSSNTKAML**QNYYTTQNEKTGYSLVQGSVGENYDIVLAVRQKDSFGNSLPSVVSKQKDSFRKTLPVEVSKQKKSSSSSSSSDDSSDDEKDKKRGGGKVPPKVDGAITYGPWGGTGGSMFNDGTYTGIRQINLSRNVGIVSMKVCYDQDGKAVWGSKHGGTGGFRHDRVIFDYPYEILTQITGTYGPVMYMGPNIIRSLTFHTTKGKHGPFGEEQGQSFSNKIGEGKIVGFHGRDGLFLDAIGVYVKVGMV*****************************************ACGVIKEPAPCGPGPWGGDGGRAWDDGVFSGIKQIFVTRAEAVHSIQIEYDRNGQFIWSVKHGGNGGTYTHRVMIRLTS
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MSFEDSDKKPIAVGPWGGQNGTRWDDGVHTTVRQLVIAHGAGIDSIQIEYDNKGGSCWSEKHGGNGGTKFDQVKLDDPDEFLTSVHGHYGATNDRGSVFVRSLTFQSNRKTYGPFGVEQGTYFSFPMTGGKIVGFHGRCGWYLDAIGIYLKSVVKKVSSNTKAMLQTQNYYTTQNEKTGYSLVQGSVGENYDIVLAVRQKDSFGNSLPSVVSKQKDSFRKTLPVEVSKQKKSSSSSSSSDDSSDDEKDKKRGGGKVPPKVDGAITYGPWGGTGGSMFNDGTYTGIRQINLSRNVGIVSMKVCYDQDGKAVWGSKHGGTGGFRHDRVIFDYPYEILTQITGTYGPVMYMGPNIIRSLTFHTTKGKHGPFGEEQGQSFSNKIGEGKIVGFHGRDGLFLDAIGVYVKVGMVTPATHPVSNAIVRADTPIAEIDNPQWSNKLLVAKQGVPEEVACGVIKEPAPCGPGPWGGDGGRAWDDGVFSGIKQIFVTRAEAVHSIQIEYDRNGQFIWSVKHGGNGGTYTHRVMIRLTS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query528 2.2.26 [Sep-21-2011]
P82859309 Agglutinin OS=Castanea cr N/A no 0.244 0.417 0.431 2e-21
P83304447 Mannose/glucose-specific N/A no 0.257 0.304 0.408 2e-18
P18670133 Agglutinin alpha chain OS N/A no 0.240 0.954 0.410 1e-17
P18674133 Agglutinin alpha chain OS N/A no 0.242 0.962 0.375 2e-17
O04312300 Myrosinase-binding protei no no 0.259 0.456 0.347 3e-17
Q9SAV1642 Myrosinase-binding protei no no 0.251 0.207 0.358 9e-17
O80998449 Myrosinase-binding protei no no 0.263 0.309 0.328 6e-16
Q9SAV0462 Myrosinase-binding protei no no 0.253 0.290 0.340 6e-16
O80950 458 Myrosinase-binding protei no no 0.388 0.447 0.278 4e-15
O04309451 Myrosinase-binding protei no no 0.261 0.305 0.314 1e-13
>sp|P82859|LECA_CASCR Agglutinin OS=Castanea crenata PE=1 SV=1 Back     alignment and function desciption
 Score =  104 bits (260), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/132 (43%), Positives = 81/132 (61%), Gaps = 3/132 (2%)

Query: 23  RWDDGVHTTVRQLVIAHG-AGIDSIQIEYDNKGGS-CWSEKHGGNGGTKFDQVKLDDPDE 80
            WDDGV   +R+L +  G + I +I++ Y +K G    S KHGG GG   D +KL+   E
Sbjct: 176 EWDDGVFPAIRELHLYVGDSVIHAIRVSYQSKDGEPLLSPKHGGEGGEPIDPIKLEVSKE 235

Query: 81  FLTSVHGHYGATNDRGSV-FVRSLTFQSNRKTYGPFGVEQGTYFSFPMTGGKIVGFHGRC 139
           FL  + G YG     GS   +RS+TF +N+  YGP+G E G  F+  +  G++VGFHGR 
Sbjct: 236 FLIRIAGFYGPVEGSGSFKALRSITFYTNKAKYGPYGDEIGQAFTSSVAPGRVVGFHGRS 295

Query: 140 GWYLDAIGIYLK 151
           G YLDAIG++++
Sbjct: 296 GAYLDAIGVHME 307
D-mannose/D-glucose-binding lectin. Has mitogenic and hemagglutinating activities.
Castanea crenata (taxid: 103480)
>sp|P83304|LEC_PARPC Mannose/glucose-specific lectin (Fragment) OS=Parkia platycephala PE=1 SV=1 Back     alignment and function description
>sp|P18670|LECA_ARTIN Agglutinin alpha chain OS=Artocarpus integer PE=1 SV=2 Back     alignment and function description
>sp|P18674|LECA_MACPO Agglutinin alpha chain OS=Maclura pomifera PE=1 SV=2 Back     alignment and function description
>sp|O04312|MB32_ARATH Myrosinase-binding protein-like At3g16440 OS=Arabidopsis thaliana GN=At3g16440 PE=2 SV=1 Back     alignment and function description
>sp|Q9SAV1|MB11_ARATH Myrosinase-binding protein-like At1g52030 OS=Arabidopsis thaliana GN=F-ATMBP PE=2 SV=1 Back     alignment and function description
>sp|O80998|MB21_ARATH Myrosinase-binding protein-like At2g25980 OS=Arabidopsis thaliana GN=At2g25980 PE=2 SV=1 Back     alignment and function description
>sp|Q9SAV0|MB12_ARATH Myrosinase-binding protein-like At1g52040 OS=Arabidopsis thaliana GN=At1g52040 PE=2 SV=1 Back     alignment and function description
>sp|O80950|MB22_ARATH Myrosinase-binding protein-like At2g39310 OS=Arabidopsis thaliana GN=At2g39310 PE=2 SV=1 Back     alignment and function description
>sp|O04309|MB31_ARATH Myrosinase-binding protein-like At3g16470 OS=Arabidopsis thaliana GN=At3g16470 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query528
255538774 1218 pentatricopeptide repeat-containing prot 0.950 0.412 0.645 0.0
359492699 1545 PREDICTED: pentatricopeptide repeat-cont 0.933 0.319 0.611 1e-169
302142562 670 unnamed protein product [Vitis vinifera] 0.971 0.765 0.603 1e-168
449470126 1463 PREDICTED: pentatricopeptide repeat-cont 0.941 0.339 0.615 1e-166
357490819604 Myrosinase-binding protein-like protein 0.946 0.827 0.605 1e-166
356541741594 PREDICTED: myrosinase-binding protein-li 0.931 0.828 0.581 1e-158
356569525604 PREDICTED: agglutinin-like [Glycine max] 0.935 0.817 0.571 1e-156
297850366 1490 hypothetical protein ARALYDRAFT_472198 [ 0.928 0.328 0.574 1e-155
297850364596 jacalin lectin family protein [Arabidops 0.928 0.822 0.574 1e-154
334182701601 mannose-binding lectin-like protein [Ara 0.922 0.810 0.576 1e-151
>gi|255538774|ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223551153|gb|EEF52639.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  653 bits (1684), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/525 (64%), Positives = 417/525 (79%), Gaps = 23/525 (4%)

Query: 1    MSFEDSDKKPIAVGPWGGQNGTRWDDGVHTTVRQLVIAHGAGIDSIQIEYDNKGGSCWSE 60
            ++F D +KKPIAVGPWGGQNG RWDDGV++TVRQLVI HG+GIDSIQIEYD KG S WSE
Sbjct: 623  LAFGDGEKKPIAVGPWGGQNGCRWDDGVYSTVRQLVIVHGSGIDSIQIEYDKKGTSIWSE 682

Query: 61   KHGGNGGTKFDQVKLDDPDEFLTSVHGHYGATNDRGSVFVRSLTFQSNRKTYGPFGVEQG 120
            KHGGNGG + D+VKLD PDE+L SV GHYG+ N  G VFVRSLTFQSN++TYGPFGVEQG
Sbjct: 683  KHGGNGGNRTDKVKLDYPDEYLASVSGHYGSLNQWGPVFVRSLTFQSNKRTYGPFGVEQG 742

Query: 121  TYFSFPMTGGKIVGFHGRCGWYLDAIGIYLKSVVKKVSSNTKAMLQTQNYYTTQNEKTGY 180
            TYFSFPMTGG+IVGFHG+ G+++DAIGIYLK V ++ SS  KA++Q +++     E  GY
Sbjct: 743  TYFSFPMTGGRIVGFHGKGGYFVDAIGIYLKPVPQQKSS--KALVQAKSFVNNGTENIGY 800

Query: 181  SLVQGSVGENYDIVLAVRQKDSFGNSLPSVVSKQKDSFRKTLPVEVSKQKKSSSSSSSSD 240
            S++QG+ G +YDIV+AVRQK+  G            S  KT P+          SS SSD
Sbjct: 801  SVIQGTAGNSYDIVVAVRQKEENG------------SLLKTKPL------LKQISSESSD 842

Query: 241  DSSDDEKDKKRGGGKVPPKVDGAITYGPWGGTGGSMFNDGTYTGIRQINLSRNVGIVSMK 300
            D ++D+  +      +P K +  IT+GPWGGTGG  F+DGT TGIRQI LSR++GIVS++
Sbjct: 843  DEANDKTLRNES---LPSKPESVITHGPWGGTGGYTFDDGTNTGIRQIYLSRSIGIVSIR 899

Query: 301  VCYDQDGKAVWGSKHGGTGGFRHDRVIFDYPYEILTQITGTYGPVMYMGPNIIRSLTFHT 360
            V YD++G+AVWGSKHGGTGGF+ +++ FDYPYEILT I+GTYGP+M+MGPNII+SLTF+T
Sbjct: 900  VQYDRNGQAVWGSKHGGTGGFKTEKITFDYPYEILTHISGTYGPLMFMGPNIIKSLTFYT 959

Query: 361  TKGKHGPFGEEQGQSFSNKIGEGKIVGFHGRDGLFLDAIGVYVKVGMVTPATHPVSNAIV 420
             KGKHGPFG+EQG SFS K   GKIVGFHG++GLFLDAIGV +  G V PA H +++AI+
Sbjct: 960  NKGKHGPFGDEQGPSFSTKPNGGKIVGFHGKEGLFLDAIGVNLMEGKVKPARHYLTDAII 1019

Query: 421  RADTPIAEIDNPQWSNKLLVAKQGVPEEVACGVIKEPAPCGPGPWGGDGGRAWDDGVFSG 480
            +A+  + EIDN  WSNKL++A++G  +EVAC V+KEPAPCGPGPWGGDGGR WDDGVFSG
Sbjct: 1020 QAEADVTEIDNSPWSNKLVLARRGPTDEVACSVVKEPAPCGPGPWGGDGGRPWDDGVFSG 1079

Query: 481  IKQIFVTRAEAVHSIQIEYDRNGQFIWSVKHGGNGGTYTHRVMIR 525
            IKQIFVTRAEA+ SIQIEYDRNGQ +WSV+HGG+GGT T+RV + 
Sbjct: 1080 IKQIFVTRAEAICSIQIEYDRNGQSVWSVRHGGSGGTATNRVKLE 1124

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|302142562|emb|CBI19765.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449470126|ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357490819|ref|XP_003615697.1| Myrosinase-binding protein-like protein [Medicago truncatula] gi|355517032|gb|AES98655.1| Myrosinase-binding protein-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|356541741|ref|XP_003539332.1| PREDICTED: myrosinase-binding protein-like At1g52040-like [Glycine max] Back     alignment and taxonomy information
>gi|356569525|ref|XP_003552950.1| PREDICTED: agglutinin-like [Glycine max] Back     alignment and taxonomy information
>gi|297850366|ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp. lyrata] gi|297338906|gb|EFH69323.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297850364|ref|XP_002893063.1| jacalin lectin family protein [Arabidopsis lyrata subsp. lyrata] gi|297338905|gb|EFH69322.1| jacalin lectin family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|334182701|ref|NP_001185041.1| mannose-binding lectin-like protein [Arabidopsis thaliana] gi|332191769|gb|AEE29890.1| mannose-binding lectin-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query528
TAIR|locus:2032622176 AT1G73040 "AT1G73040" [Arabido 0.278 0.835 0.5 9.9e-39
UNIPROTKB|P83304447 P83304 "Mannose/glucose-specif 0.255 0.302 0.404 3.2e-19
TAIR|locus:2088374705 JAL34 "jacalin-related lectin 0.263 0.197 0.377 2.9e-36
TAIR|locus:2088344298 PBP1 "PYK10-binding protein 1" 0.253 0.449 0.364 4e-19
TAIR|locus:2088354296 JAL31 "jacalin-related lectin 0.251 0.449 0.360 1.4e-18
TAIR|locus:2088369300 JAL33 "AT3G16450" [Arabidopsis 0.251 0.443 0.352 1.9e-19
TAIR|locus:2034026462 MBP1 "myrosinase-binding prote 0.251 0.287 0.360 2.7e-16
TAIR|locus:2034061314 AT1G52060 "AT1G52060" [Arabido 0.248 0.417 0.384 1e-30
TAIR|locus:2162828444 AT5G35940 "AT5G35940" [Arabido 0.253 0.301 0.316 4.5e-14
TAIR|locus:2088364300 MLP-300B "AT3G16440" [Arabidop 0.253 0.446 0.348 5.1e-19
TAIR|locus:2032622 AT1G73040 "AT1G73040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
 Identities = 74/148 (50%), Positives = 102/148 (68%)

Query:     4 EDSDKK-PIAVGPWGGQNGTRWDDGVHTTVRQLVIAHGAGIDSIQIEYDNKGGSCWSEKH 62
             +  DK   + VGPWGG  GT WDDG++  VR++ + +   IDSI + YD  G    SEKH
Sbjct:     5 QQGDKNLTVFVGPWGGNGGTTWDDGIYDGVREIRLVYDHCIDSISVIYDKNGKPAKSEKH 64

Query:    63 GGNGGTKFDQVKLDDPDEFLTSVHGHYGATNDRGSVFVRSLTFQSNRKTYGPFGVEQGTY 122
             GG GG K  ++KL  P+E+LT V G+Y    + G+  +RS+TF+SN++ YGP+GVEQGT 
Sbjct:    65 GGVGGNKTSEIKLQYPEEYLTGVSGYYCPMVNSGTPVIRSMTFKSNKQVYGPYGVEQGTP 124

Query:   123 FSFPMTGGKIVGFHGRCGWYLDAIGIYL 150
             F+F + GG+IVG +GR GWYLD+IG +L
Sbjct:   125 FTFSVNGGRIVGMNGRSGWYLDSIGFHL 152
GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0015996 "chlorophyll catabolic process" evidence=RCA
UNIPROTKB|P83304 P83304 "Mannose/glucose-specific lectin" [Parkia platycephala (taxid:185447)] Back     alignment and assigned GO terms
TAIR|locus:2088374 JAL34 "jacalin-related lectin 34" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088344 PBP1 "PYK10-binding protein 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088354 JAL31 "jacalin-related lectin 31" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088369 JAL33 "AT3G16450" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034026 MBP1 "myrosinase-binding protein 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034061 AT1G52060 "AT1G52060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2162828 AT5G35940 "AT5G35940" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088364 MLP-300B "AT3G16440" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query528
cd09612130 cd09612, Jacalin, Jacalin-like plant lectin domain 4e-46
cd09612130 cd09612, Jacalin, Jacalin-like plant lectin domain 3e-36
pfam01419132 pfam01419, Jacalin, Jacalin-like lectin domain 1e-35
smart00915128 smart00915, Jacalin, Jacalin-like lectin domain 5e-32
smart00915128 smart00915, Jacalin, Jacalin-like lectin domain 2e-29
pfam01419132 pfam01419, Jacalin, Jacalin-like lectin domain 9e-29
cd09302128 cd09302, Jacalin_like, Jacalin-like lectin domain 3e-15
PLN02193470 PLN02193, PLN02193, nitrile-specifier protein 6e-14
cd09302128 cd09302, Jacalin_like, Jacalin-like lectin domain 1e-08
PLN02193 470 PLN02193, PLN02193, nitrile-specifier protein 3e-08
smart00915128 smart00915, Jacalin, Jacalin-like lectin domain 6e-08
cd09611128 cd09611, Jacalin_ZG16_like, Jacalin-like lectin do 1e-07
cd09612130 cd09612, Jacalin, Jacalin-like plant lectin domain 4e-07
pfam01419132 pfam01419, Jacalin, Jacalin-like lectin domain 5e-07
cd09614128 cd09614, griffithsin_like, Jacalin-like lectin dom 1e-06
cd09615134 cd09615, Jacalin_EEP, Jacalin-like lectin domains 9e-06
cd09611128 cd09611, Jacalin_ZG16_like, Jacalin-like lectin do 7e-05
>gnl|CDD|187708 cd09612, Jacalin, Jacalin-like plant lectin domain Back     alignment and domain information 
 Score =  157 bits (399), Expect = 4e-46
 Identities = 72/133 (54%), Positives = 92/133 (69%), Gaps = 5/133 (3%)

Query: 21  GTRWDDGVHTT-VRQLVIAHGA-GIDSIQIEYDNKGGSCWSEKHGGNGGTKFDQVKLDDP 78
           G+ WDDGV    +R++ +  G  GIDSI+ EYD  G       HGG GGT  +++ LD P
Sbjct: 1   GSAWDDGVFPDGLRKITVRSGENGIDSIKFEYDKDGQHVVGPWHGGGGGT-PEEIVLDYP 59

Query: 79  DEFLTSVHGHYGATNDRGSVFVRSLTFQSNRKTYGPFGVEQGTYFSFPMTGGKIVGFHGR 138
           DE++TSV G YG  +  GS  + SLTF++N++TYGPFGVE GT FS P+ GGKIVGFHGR
Sbjct: 60  DEYITSVSGTYGPVS--GSNVITSLTFKTNKRTYGPFGVESGTPFSLPVEGGKIVGFHGR 117

Query: 139 CGWYLDAIGIYLK 151
            G YLDAIG+Y+ 
Sbjct: 118 SGDYLDAIGVYVS 130

Jacalin-like lectins are sugar-binding protein domains mostly found in plants. They adopt a beta-prism topology consistent with a circularly permuted three-fold repeat of a structural motif. Proteins containing this domain may bind mono- or oligosaccharides with high specificity. The domain can occur in tandem-repeat arrangements with up to six copies, and in architectures combined with a variety of other functional domains. The family was initially named after an abundant protein found in the jackfruit seed. Jacalin specifically binds to the alpha-O-glycoside of the disaccharide Gal-beta1-3-GalNAc, and has proven useful in the study of O-linked glycoproteins. Jacalin-like lectins in this family may occur in various oligomerization states. Length = 130
>gnl|CDD|187708 cd09612, Jacalin, Jacalin-like plant lectin domain Back     alignment and domain information
>gnl|CDD|216489 pfam01419, Jacalin, Jacalin-like lectin domain Back     alignment and domain information
>gnl|CDD|214909 smart00915, Jacalin, Jacalin-like lectin domain Back     alignment and domain information
>gnl|CDD|214909 smart00915, Jacalin, Jacalin-like lectin domain Back     alignment and domain information
>gnl|CDD|216489 pfam01419, Jacalin, Jacalin-like lectin domain Back     alignment and domain information
>gnl|CDD|187706 cd09302, Jacalin_like, Jacalin-like lectin domain Back     alignment and domain information
>gnl|CDD|177844 PLN02193, PLN02193, nitrile-specifier protein Back     alignment and domain information
>gnl|CDD|187706 cd09302, Jacalin_like, Jacalin-like lectin domain Back     alignment and domain information
>gnl|CDD|177844 PLN02193, PLN02193, nitrile-specifier protein Back     alignment and domain information
>gnl|CDD|214909 smart00915, Jacalin, Jacalin-like lectin domain Back     alignment and domain information
>gnl|CDD|187707 cd09611, Jacalin_ZG16_like, Jacalin-like lectin domain of the zymogen granule protein 16 and related proteins Back     alignment and domain information
>gnl|CDD|187708 cd09612, Jacalin, Jacalin-like plant lectin domain Back     alignment and domain information
>gnl|CDD|216489 pfam01419, Jacalin, Jacalin-like lectin domain Back     alignment and domain information
>gnl|CDD|187710 cd09614, griffithsin_like, Jacalin-like lectin domain of griffithsin and related proteins Back     alignment and domain information
>gnl|CDD|187711 cd09615, Jacalin_EEP, Jacalin-like lectin domains of putative endonucleases/exonucleases/phosphatases and related proteins Back     alignment and domain information
>gnl|CDD|187707 cd09611, Jacalin_ZG16_like, Jacalin-like lectin domain of the zymogen granule protein 16 and related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 528
PLN02193 470 nitrile-specifier protein 99.97
PLN02193470 nitrile-specifier protein 99.96
PF01419130 Jacalin: Jacalin-like lectin domain; InterPro: IPR 99.96
PF01419130 Jacalin: Jacalin-like lectin domain; InterPro: IPR 99.96
KOG4525614 consensus Jacalin-like lectin domain-containing pr 98.56
KOG4525614 consensus Jacalin-like lectin domain-containing pr 98.44
>PLN02193 nitrile-specifier protein Back     alignment and domain information 
Probab=99.97  E-value=1.3e-29  Score=274.69  Aligned_cols=139  Identities=29%  Similarity=0.519  Sum_probs=128.1

Q ss_pred             eeeeeeeCCCCCCCccCCCCceEEEEEEEC-CeEEEEEEEEecCCcEEEccCCCCCCCCcceEEEecCCCcEEEEEEEEE
Q 009701          264 ITYGPWGGTGGSMFNDGTYTGIRQINLSRN-VGIVSMKVCYDQDGKAVWGSKHGGTGGFRHDRVIFDYPYEILTQITGTY  342 (528)
Q Consensus       264 ~k~Gp~GG~gG~~fddg~~~gVr~I~V~~g-~~IdsIqf~Y~~~G~~~~~~~hGg~gG~~~~e~~Ldyp~EyIt~V~Gt~  342 (528)
                      .|+++|||++|+.|||+.+++||||+|.++ ..|++|+|+|+++++++++..||..++...+||+|+ |+||||+|+|+|
T Consensus         3 ~~~~~~gg~~g~~wddg~~~~v~~i~~~~~~~~i~~~~~~y~~~~~~~~~~~~g~~~~~~~~~~~~~-~~e~~~~v~g~~   81 (470)
T PLN02193          3 QKLEAKGGETGDVWDDGVYDNVRKVYVGQGQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEID-ADDYIVYVEGYR   81 (470)
T ss_pred             eeeccccCCCCCcCcCCCcCCeEEEEEEeCCCEEEEEEEEEeCCCcEEEeccCCCCCCCCcEEEEEC-CCCcEEEEEEEe
Confidence            688999999999999999999999999997 599999999999999888899999887556899999 999999999999


Q ss_pred             cCcccCCCcEEEEEEEEeCCC-ccccCCCCCCceEEEeecCCEEEEEEEecCCCccEEEEEEEe
Q 009701          343 GPVMYMGPNIIRSLTFHTTKG-KHGPFGEEQGQSFSNKIGEGKIVGFHGRDGLFLDAIGVYVKV  405 (528)
Q Consensus       343 g~~~~~~~~~I~sLtF~TNkg-~~gpfG~~~Gt~F~~~~~g~~IVGF~GRaG~~ldaIGvy~~~  405 (528)
                      +++......+|+||+|+|||+ +++|||...|++|++  ++++|||||||++.+|++||+|+..
T Consensus        82 ~~~~~~~~~~i~~l~f~t~~~~~~~~~g~~~g~~f~~--~~~~ivgf~G~~~~~~~~ig~y~~~  143 (470)
T PLN02193         82 EKVNDMTSEMITFLSFKTYKGKTSHPIEKRPGVKFVL--QGGKIVGFHGRSTDVLHSLGAYISL  143 (470)
T ss_pred             cCcCCCCceeEEEEEEEeCCCccccccccCCCCEEEE--cCCeEEEEeccCCCcEEeeEEEEec
Confidence            997655668999999999996 678999999999998  4899999999999999999999874

>PLN02193 nitrile-specifier protein Back     alignment and domain information
>PF01419 Jacalin: Jacalin-like lectin domain; InterPro: IPR001229 This entry represents a mannose-binding lectin domain with a beta-prism fold consisting of three 4-stranded beta-sheets, with an internal pseudo 3-fold symmetry Back     alignment and domain information
>PF01419 Jacalin: Jacalin-like lectin domain; InterPro: IPR001229 This entry represents a mannose-binding lectin domain with a beta-prism fold consisting of three 4-stranded beta-sheets, with an internal pseudo 3-fold symmetry Back     alignment and domain information
>KOG4525 consensus Jacalin-like lectin domain-containing protein [General function prediction only] Back     alignment and domain information
>KOG4525 consensus Jacalin-like lectin domain-containing protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query528
1xxq_A161 Structure Of A Mannose-Specific Jacalin-Related Lec 1e-27
1xxq_A161 Structure Of A Mannose-Specific Jacalin-Related Lec 1e-25
3p8s_A157 Crystal Structure Of Single Chain Recombinant Jacal 4e-22
3p8s_A157 Crystal Structure Of Single Chain Recombinant Jacal 4e-19
1j4s_A149 Structure Of Artocarpin: A Lectin With Mannose Spec 1e-21
1j4s_A149 Structure Of Artocarpin: A Lectin With Mannose Spec 2e-20
1j4t_A149 Structure Of Artocarpin: A Lectin With Mannose Spec 1e-21
1j4t_A149 Structure Of Artocarpin: A Lectin With Mannose Spec 3e-20
4akd_A150 High Resolution Structure Of Mannose Binding Lectin 7e-20
4ak4_A133 High Resolution Structure Of Galactose Binding Lect 1e-19
4ak4_A133 High Resolution Structure Of Galactose Binding Lect 2e-17
1vbp_A149 Crystal Structure Of Artocarpin-Mannopentose Comple 2e-19
1vbp_A149 Crystal Structure Of Artocarpin-Mannopentose Comple 2e-19
1vbo_A149 Crystal Structure Of Artocarpin-Mannotriose Complex 2e-19
1vbo_A149 Crystal Structure Of Artocarpin-Mannotriose Complex 2e-19
4akb_A133 Structure Of Galactose Binding Lectin From Champeda 4e-19
4akb_A133 Structure Of Galactose Binding Lectin From Champeda 2e-17
1toq_A133 Crystal Structure Of A Galactose Specific Lectin Fr 4e-19
1toq_A133 Crystal Structure Of A Galactose Specific Lectin Fr 1e-17
1zgr_A447 Crystal Structure Of The Parkia Platycephala Seed L 6e-19
1zgr_A447 Crystal Structure Of The Parkia Platycephala Seed L 2e-16
1jac_A133 A Novel Mode Of Carbohydrate Recognition In Jacalin 1e-18
1jac_A133 A Novel Mode Of Carbohydrate Recognition In Jacalin 7e-17
1ugw_A133 Crystal Structure Of Jacalin- Gal Complex Length = 2e-18
1ugw_A133 Crystal Structure Of Jacalin- Gal Complex Length = 9e-17
1jot_A133 Structure Of The Lectin Mpa Complexed With T-Antige 2e-18
1jot_A133 Structure Of The Lectin Mpa Complexed With T-Antige 5e-17
2jz4_A299 Putative 32 Kda Myrosinase Binding Protein At3g1645 5e-18
2jz4_A299 Putative 32 Kda Myrosinase Binding Protein At3g1645 1e-13
1x1v_A141 Structure Of Banana Lectin- Methyl-Alpha-Mannose Co 1e-17
1x1v_A141 Structure Of Banana Lectin- Methyl-Alpha-Mannose Co 3e-13
2bmy_A141 Banana Lectin Length = 141 2e-17
2bmy_A141 Banana Lectin Length = 141 3e-13
1c3k_A147 Crystal Structure Of Helianthus Tuberosus Lectin Le 6e-17
1c3k_A147 Crystal Structure Of Helianthus Tuberosus Lectin Le 1e-11
1ouw_A152 Crystal Structure Of Calystegia Sepium Agglutinin L 5e-13
1ouw_A152 Crystal Structure Of Calystegia Sepium Agglutinin L 8e-11
3r50_A160 Structure Analysis Of A Wound-Inducible Lectin Ipom 2e-09
3r50_A160 Structure Analysis Of A Wound-Inducible Lectin Ipom 2e-08
>pdb|1XXQ|A Chain A, Structure Of A Mannose-Specific Jacalin-Related Lectin From Morus Nigra Length = 161 Back     alignment and structure 
Iteration: 1

 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/143 (46%), Positives = 89/143 (62%), Gaps = 3/143 (2%)
Query: 11  IAVGPWGGQNGTRWDDGVHTTVRQLVIAHGAGIDSIQIEYDNKGGSCWSEKHGGNGGT-K 69
           I VG WGG  G  WDDG +T +R++ ++HG  I +  + YD  G       H GN  + K
Sbjct: 17  IEVGLWGGPGGNAWDDGSYTGIREINLSHGDAIGAFSVIYDLNGQPFTGPTHPGNEPSFK 76
Query: 70  FDQVKLDDPDEFLTSVHGHYG--ATNDRGSVFVRSLTFQSNRKTYGPFGVEQGTYFSFPM 127
             ++ LD P+EFL SV G+ G  A    G   +RSLTF++N+KTYGP+G E+GT FS P+
Sbjct: 77  TVKITLDFPNEFLVSVSGYTGVLARLATGKDVIRSLTFKTNKKTYGPYGKEEGTPFSLPI 136
Query: 128 TGGKIVGFHGRCGWYLDAIGIYL 150
             G IVGF GR G+ +DAIG +L
Sbjct: 137 ENGLIVGFKGRSGFVVDAIGFHL 159
>pdb|1XXQ|A Chain A, Structure Of A Mannose-Specific Jacalin-Related Lectin From Morus Nigra Length = 161 Back     alignment and structure
>pdb|3P8S|A Chain A, Crystal Structure Of Single Chain Recombinant Jacalin Showing Highly Dynamic Posttranslational Excission Loop That Reduces Binding Affinity Length = 157 Back     alignment and structure
>pdb|3P8S|A Chain A, Crystal Structure Of Single Chain Recombinant Jacalin Showing Highly Dynamic Posttranslational Excission Loop That Reduces Binding Affinity Length = 157 Back     alignment and structure
>pdb|1J4S|A Chain A, Structure Of Artocarpin: A Lectin With Mannose Specificity (Form 1) Length = 149 Back     alignment and structure
>pdb|1J4S|A Chain A, Structure Of Artocarpin: A Lectin With Mannose Specificity (Form 1) Length = 149 Back     alignment and structure
>pdb|1J4T|A Chain A, Structure Of Artocarpin: A Lectin With Mannose Specificity (Form 2) Length = 149 Back     alignment and structure
>pdb|1J4T|A Chain A, Structure Of Artocarpin: A Lectin With Mannose Specificity (Form 2) Length = 149 Back     alignment and structure
>pdb|4AKD|A Chain A, High Resolution Structure Of Mannose Binding Lectin From Champedak (cmb) Length = 150 Back     alignment and structure
>pdb|4AK4|A Chain A, High Resolution Structure Of Galactose Binding Lectin From Champedak (cgb) Length = 133 Back     alignment and structure
>pdb|4AK4|A Chain A, High Resolution Structure Of Galactose Binding Lectin From Champedak (cgb) Length = 133 Back     alignment and structure
>pdb|1VBP|A Chain A, Crystal Structure Of Artocarpin-Mannopentose Complex Length = 149 Back     alignment and structure
>pdb|1VBP|A Chain A, Crystal Structure Of Artocarpin-Mannopentose Complex Length = 149 Back     alignment and structure
>pdb|1VBO|A Chain A, Crystal Structure Of Artocarpin-Mannotriose Complex Length = 149 Back     alignment and structure
>pdb|1VBO|A Chain A, Crystal Structure Of Artocarpin-Mannotriose Complex Length = 149 Back     alignment and structure
>pdb|4AKB|A Chain A, Structure Of Galactose Binding Lectin From Champedak (cgb) With Galactose Length = 133 Back     alignment and structure
>pdb|4AKB|A Chain A, Structure Of Galactose Binding Lectin From Champedak (cgb) With Galactose Length = 133 Back     alignment and structure
>pdb|1TOQ|A Chain A, Crystal Structure Of A Galactose Specific Lectin From Artocarpus Hirsuta In Complex With Methyl-a-d-galactose Length = 133 Back     alignment and structure
>pdb|1TOQ|A Chain A, Crystal Structure Of A Galactose Specific Lectin From Artocarpus Hirsuta In Complex With Methyl-a-d-galactose Length = 133 Back     alignment and structure
>pdb|1ZGR|A Chain A, Crystal Structure Of The Parkia Platycephala Seed Lectin Length = 447 Back     alignment and structure
>pdb|1ZGR|A Chain A, Crystal Structure Of The Parkia Platycephala Seed Lectin Length = 447 Back     alignment and structure
>pdb|1JAC|A Chain A, A Novel Mode Of Carbohydrate Recognition In Jacalin, A Moraceae Plant Lectin With A Beta-Prism Length = 133 Back     alignment and structure
>pdb|1JAC|A Chain A, A Novel Mode Of Carbohydrate Recognition In Jacalin, A Moraceae Plant Lectin With A Beta-Prism Length = 133 Back     alignment and structure
>pdb|1UGW|A Chain A, Crystal Structure Of Jacalin- Gal Complex Length = 133 Back     alignment and structure
>pdb|1UGW|A Chain A, Crystal Structure Of Jacalin- Gal Complex Length = 133 Back     alignment and structure
>pdb|1JOT|A Chain A, Structure Of The Lectin Mpa Complexed With T-Antigen Disaccharide Length = 133 Back     alignment and structure
>pdb|1JOT|A Chain A, Structure Of The Lectin Mpa Complexed With T-Antigen Disaccharide Length = 133 Back     alignment and structure
>pdb|2JZ4|A Chain A, Putative 32 Kda Myrosinase Binding Protein At3g16450.1 From Arabidopsis Thaliana Length = 299 Back     alignment and structure
>pdb|2JZ4|A Chain A, Putative 32 Kda Myrosinase Binding Protein At3g16450.1 From Arabidopsis Thaliana Length = 299 Back     alignment and structure
>pdb|1X1V|A Chain A, Structure Of Banana Lectin- Methyl-Alpha-Mannose Complex Length = 141 Back     alignment and structure
>pdb|1X1V|A Chain A, Structure Of Banana Lectin- Methyl-Alpha-Mannose Complex Length = 141 Back     alignment and structure
>pdb|2BMY|A Chain A, Banana Lectin Length = 141 Back     alignment and structure
>pdb|2BMY|A Chain A, Banana Lectin Length = 141 Back     alignment and structure
>pdb|1C3K|A Chain A, Crystal Structure Of Helianthus Tuberosus Lectin Length = 147 Back     alignment and structure
>pdb|1C3K|A Chain A, Crystal Structure Of Helianthus Tuberosus Lectin Length = 147 Back     alignment and structure
>pdb|1OUW|A Chain A, Crystal Structure Of Calystegia Sepium Agglutinin Length = 152 Back     alignment and structure
>pdb|1OUW|A Chain A, Crystal Structure Of Calystegia Sepium Agglutinin Length = 152 Back     alignment and structure
>pdb|3R50|A Chain A, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin From Sweet Potato Length = 160 Back     alignment and structure
>pdb|3R50|A Chain A, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin From Sweet Potato Length = 160 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query528
1zgr_A447 Mannose/glucose-specific lectin; beta-prism, sugar 5e-57
1zgr_A447 Mannose/glucose-specific lectin; beta-prism, sugar 4e-39
1zgr_A447 Mannose/glucose-specific lectin; beta-prism, sugar 4e-36
1zgr_A 447 Mannose/glucose-specific lectin; beta-prism, sugar 9e-34
1zgr_A447 Mannose/glucose-specific lectin; beta-prism, sugar 3e-31
1xxq_A161 Mannose-binding lectin; tetrameric B-prism fold, j 5e-51
1xxq_A161 Mannose-binding lectin; tetrameric B-prism fold, j 2e-45
1xxq_A161 Mannose-binding lectin; tetrameric B-prism fold, j 2e-15
2jz4_A299 Jasmonate inducible protein isolog; myrosinase bin 7e-48
2jz4_A299 Jasmonate inducible protein isolog; myrosinase bin 3e-43
2jz4_A299 Jasmonate inducible protein isolog; myrosinase bin 4e-39
2jz4_A299 Jasmonate inducible protein isolog; myrosinase bin 7e-38
3llz_A133 MPA, agglutinin alpha chain; maclura pomifera aggl 2e-46
3llz_A133 MPA, agglutinin alpha chain; maclura pomifera aggl 3e-41
3llz_A133 MPA, agglutinin alpha chain; maclura pomifera aggl 6e-10
3p8s_A157 Jacalin; hemeagglutinin, sugars, sugar binding P; 2e-46
3p8s_A157 Jacalin; hemeagglutinin, sugars, sugar binding P; 3e-41
3p8s_A157 Jacalin; hemeagglutinin, sugars, sugar binding P; 4e-11
1c3k_A147 Agglutinin; beta prism, jacalin-related, mannose, 8e-44
1c3k_A147 Agglutinin; beta prism, jacalin-related, mannose, 1e-35
1c3k_A147 Agglutinin; beta prism, jacalin-related, mannose, 6e-11
1ouw_A152 Lectin, agglutinin; beta-prism fold, mannose-bindi 4e-43
1ouw_A152 Lectin, agglutinin; beta-prism fold, mannose-bindi 6e-35
1ouw_A152 Lectin, agglutinin; beta-prism fold, mannose-bindi 1e-10
4ddn_A160 Ipomoelin; beta prism, carbohydrate binding protei 8e-43
4ddn_A160 Ipomoelin; beta prism, carbohydrate binding protei 2e-36
4ddn_A160 Ipomoelin; beta prism, carbohydrate binding protei 2e-10
3mit_A141 Lectin; all beta sheet protein, beta prism-I fold, 2e-40
3mit_A141 Lectin; all beta sheet protein, beta prism-I fold, 5e-36
3mit_A141 Lectin; all beta sheet protein, beta prism-I fold, 2e-11
3apa_A141 Zymogen granule membrane protein 16; beta-prism fo 1e-30
3apa_A141 Zymogen granule membrane protein 16; beta-prism fo 1e-28
3apa_A141 Zymogen granule membrane protein 16; beta-prism fo 7e-07
3apa_A141 Zymogen granule membrane protein 16; beta-prism fo 7e-04
2gux_A138 Griffithsin, GRFT; lectins, domain swapping, manno 3e-26
2gux_A138 Griffithsin, GRFT; lectins, domain swapping, manno 4e-21
2gud_A122 Griffithsin, GRFT; lectins, domain swapping, manno 3e-26
2gud_A122 Griffithsin, GRFT; lectins, domain swapping, manno 4e-20
3aqg_A158 ZG16B/PAUF, zymogen granule protein 16 homolog B; 2e-25
3aqg_A158 ZG16B/PAUF, zymogen granule protein 16 homolog B; 1e-24
3aqg_A158 ZG16B/PAUF, zymogen granule protein 16 homolog B; 3e-04
>1zgr_A Mannose/glucose-specific lectin; beta-prism, sugar binding protein; 2.50A {Parkia platycephala} PDB: 1zgs_A* Length = 447 Back     alignment and structure
 Score =  196 bits (498), Expect = 5e-57
 Identities = 110/453 (24%), Positives = 167/453 (36%), Gaps = 65/453 (14%)

Query: 6   SDKKPIAVGPWGGQNGTRWDDGVHTTVRQLVIAHGAGIDSIQIEYDNKG--GSCWSEKHG 63
           S K  I+VGPWGG  G  W    +  + ++VI     I SI  +  +    G+   +   
Sbjct: 1   SLKGMISVGPWGGSGGNYWSFKANHAITEIVIHVKDNIKSISFKDASGDISGTFGGKDPR 60

Query: 64  GNGGTKFDQVKLDDPDEFLTSVHGHYGATNDRGSVFVRSLTFQSNRKTYGPFGVEQ-GTY 122
            N      ++K+  P E+L S+ G YG  +  G + +RSL+F +N  TYGPFG    G  
Sbjct: 61  ENEKGDEKKIKIHWPTEYLKSISGSYG--DYNGVLVIRSLSFITNLTTYGPFGSTSGGES 118

Query: 123 FSFPMTGGKIVGFHGRCGWYLDAIGIYLKSVVKKVSSNTKAMLQTQNYYTTQNEKTGYSL 182
           FS P+    +VGFHGR G+YLDA+GI+++ V     S         +           S 
Sbjct: 119 FSIPIADSVVVGFHGRAGYYLDALGIFVQPVPHGTISFGPWGGPAGDDAF---NFKVGSW 175

Query: 183 VQGSVGENYDIVLAVRQKDSFGNSLPSVVSKQKDSFRKTLPVEVSKQKKSSSSSSSSDDS 242
           ++  +      + ++  KD+ G+       +  +       VE+    +   S S +  +
Sbjct: 176 IKDIIIYADAAINSIAFKDANGHCYGKFGGQDPNDIGVEKKVEIDGNLEHLKSISGTYGN 235

Query: 243 SDDEKDKKRGGGKVPPKVDGAITYGPWGGTGGSMF----NDGTYTGIRQINLSRNVGIVS 298
               +                  +GP+G   G+ F         TG    +      I  
Sbjct: 236 YKGFEVVTSLSFITNVT-----KHGPFGIASGTSFSIPIEGSLVTGFHGKSGYYLDSIGI 290

Query: 299 MKVCYDQDGKAVWGSKHGGTGGFRHD-------------------RVIFDYPYEILTQIT 339
                D +G        GG+GG                        V F     + +   
Sbjct: 291 YVKPRDVEGSISI-GPWGGSGGDPWSYTANEGINQIIIYAGSNIKSVAFKDTSGLDSATF 349

Query: 340 GTYGP----------------------------VMYMGPNIIRSLTFHTTKGKHGPFGEE 371
           G   P                                    I SL+F T    +GPFG+ 
Sbjct: 350 GGVNPKDTGEKNTVSINWPSEYLTSISGTYGQYKFKDVFTTITSLSFTTNLATYGPFGKA 409

Query: 372 QGQSFSNKIGEGKIVGFHGRDGLFLDAIGVYVK 404
              SFS  I    +VGFHGR G +LDAIG++VK
Sbjct: 410 SATSFSIPIHNNMVVGFHGRAGDYLDAIGIFVK 442
>1zgr_A Mannose/glucose-specific lectin; beta-prism, sugar binding protein; 2.50A {Parkia platycephala} PDB: 1zgs_A* Length = 447 Back     alignment and structure
>1zgr_A Mannose/glucose-specific lectin; beta-prism, sugar binding protein; 2.50A {Parkia platycephala} PDB: 1zgs_A* Length = 447 Back     alignment and structure
>1zgr_A Mannose/glucose-specific lectin; beta-prism, sugar binding protein; 2.50A {Parkia platycephala} PDB: 1zgs_A* Length = 447 Back     alignment and structure
>1zgr_A Mannose/glucose-specific lectin; beta-prism, sugar binding protein; 2.50A {Parkia platycephala} PDB: 1zgs_A* Length = 447 Back     alignment and structure
>1xxq_A Mannose-binding lectin; tetrameric B-prism fold, jacalin-fold, sugar binding protein; 1.80A {Morus nigra} PDB: 1xxr_A* 1j4t_A 1j4s_A 1j4u_A* 1vbp_A* 1vbo_A* Length = 161 Back     alignment and structure
>1xxq_A Mannose-binding lectin; tetrameric B-prism fold, jacalin-fold, sugar binding protein; 1.80A {Morus nigra} PDB: 1xxr_A* 1j4t_A 1j4s_A 1j4u_A* 1vbp_A* 1vbo_A* Length = 161 Back     alignment and structure
>1xxq_A Mannose-binding lectin; tetrameric B-prism fold, jacalin-fold, sugar binding protein; 1.80A {Morus nigra} PDB: 1xxr_A* 1j4t_A 1j4s_A 1j4u_A* 1vbp_A* 1vbo_A* Length = 161 Back     alignment and structure
>2jz4_A Jasmonate inducible protein isolog; myrosinase binding protein, AT3G16450.1, SAIL, stereo-array isotope labeling, structural genomics; NMR {Arabidopsis thaliana} Length = 299 Back     alignment and structure
>2jz4_A Jasmonate inducible protein isolog; myrosinase binding protein, AT3G16450.1, SAIL, stereo-array isotope labeling, structural genomics; NMR {Arabidopsis thaliana} Length = 299 Back     alignment and structure
>2jz4_A Jasmonate inducible protein isolog; myrosinase binding protein, AT3G16450.1, SAIL, stereo-array isotope labeling, structural genomics; NMR {Arabidopsis thaliana} Length = 299 Back     alignment and structure
>2jz4_A Jasmonate inducible protein isolog; myrosinase binding protein, AT3G16450.1, SAIL, stereo-array isotope labeling, structural genomics; NMR {Arabidopsis thaliana} Length = 299 Back     alignment and structure
>3llz_A MPA, agglutinin alpha chain; maclura pomifera agglutinin, MPA complex, GAL-beta-1, 3 lectin, sugar binding protein; HET: GAL NGA; 1.55A {Maclura pomifera} PDB: 3lly_A 1jot_A* 3lm1_A* 1m26_A* 1jac_A 1kuj_A* 1ku8_A* 1pxd_A* 1ugw_C* 1ugy_C* 1uh0_A* 1uh1_A* 1ws4_C* 1ws5_C* 1ugx_A* 1ugw_A* 1ugy_A* 1ws4_A* 1ws5_A* 1toq_A* ... Length = 133 Back     alignment and structure
>3llz_A MPA, agglutinin alpha chain; maclura pomifera agglutinin, MPA complex, GAL-beta-1, 3 lectin, sugar binding protein; HET: GAL NGA; 1.55A {Maclura pomifera} PDB: 3lly_A 1jot_A* 3lm1_A* 1m26_A* 1jac_A 1kuj_A* 1ku8_A* 1pxd_A* 1ugw_C* 1ugy_C* 1uh0_A* 1uh1_A* 1ws4_C* 1ws5_C* 1ugx_A* 1ugw_A* 1ugy_A* 1ws4_A* 1ws5_A* 1toq_A* ... Length = 133 Back     alignment and structure
>3llz_A MPA, agglutinin alpha chain; maclura pomifera agglutinin, MPA complex, GAL-beta-1, 3 lectin, sugar binding protein; HET: GAL NGA; 1.55A {Maclura pomifera} PDB: 3lly_A 1jot_A* 3lm1_A* 1m26_A* 1jac_A 1kuj_A* 1ku8_A* 1pxd_A* 1ugw_C* 1ugy_C* 1uh0_A* 1uh1_A* 1ws4_C* 1ws5_C* 1ugx_A* 1ugw_A* 1ugy_A* 1ws4_A* 1ws5_A* 1toq_A* ... Length = 133 Back     alignment and structure
>3p8s_A Jacalin; hemeagglutinin, sugars, sugar binding P; 2.00A {Artocarpus heterophyllus} Length = 157 Back     alignment and structure
>3p8s_A Jacalin; hemeagglutinin, sugars, sugar binding P; 2.00A {Artocarpus heterophyllus} Length = 157 Back     alignment and structure
>3p8s_A Jacalin; hemeagglutinin, sugars, sugar binding P; 2.00A {Artocarpus heterophyllus} Length = 157 Back     alignment and structure
>1c3k_A Agglutinin; beta prism, jacalin-related, mannose, sugar BIND protein; 2.00A {Helianthus tuberosus} SCOP: b.77.3.1 PDB: 1c3m_A* 1c3n_A* Length = 147 Back     alignment and structure
>1c3k_A Agglutinin; beta prism, jacalin-related, mannose, sugar BIND protein; 2.00A {Helianthus tuberosus} SCOP: b.77.3.1 PDB: 1c3m_A* 1c3n_A* Length = 147 Back     alignment and structure
>1c3k_A Agglutinin; beta prism, jacalin-related, mannose, sugar BIND protein; 2.00A {Helianthus tuberosus} SCOP: b.77.3.1 PDB: 1c3m_A* 1c3n_A* Length = 147 Back     alignment and structure
>1ouw_A Lectin, agglutinin; beta-prism fold, mannose-binding, jacali related, sugar binding protein; 1.37A {Calystegia sepium} SCOP: b.77.3.1 Length = 152 Back     alignment and structure
>1ouw_A Lectin, agglutinin; beta-prism fold, mannose-binding, jacali related, sugar binding protein; 1.37A {Calystegia sepium} SCOP: b.77.3.1 Length = 152 Back     alignment and structure
>1ouw_A Lectin, agglutinin; beta-prism fold, mannose-binding, jacali related, sugar binding protein; 1.37A {Calystegia sepium} SCOP: b.77.3.1 Length = 152 Back     alignment and structure
>4ddn_A Ipomoelin; beta prism, carbohydrate binding protein, carbohydrate/sugar sugar binding protein; HET: AMG; 1.90A {Ipomoea batatas} PDB: 3r50_A* 3r52_A* 3r51_A* Length = 160 Back     alignment and structure
>4ddn_A Ipomoelin; beta prism, carbohydrate binding protein, carbohydrate/sugar sugar binding protein; HET: AMG; 1.90A {Ipomoea batatas} PDB: 3r50_A* 3r52_A* 3r51_A* Length = 160 Back     alignment and structure
>4ddn_A Ipomoelin; beta prism, carbohydrate binding protein, carbohydrate/sugar sugar binding protein; HET: AMG; 1.90A {Ipomoea batatas} PDB: 3r50_A* 3r52_A* 3r51_A* Length = 160 Back     alignment and structure
>3mit_A Lectin; all beta sheet protein, beta prism-I fold, mannose specific, binding protein; HET: MAN; 2.32A {Musa acuminata} PDB: 1x1v_A* 3miu_A* 3miv_A 2bmz_A* 2bmy_A* 2bn0_A* Length = 141 Back     alignment and structure
>3mit_A Lectin; all beta sheet protein, beta prism-I fold, mannose specific, binding protein; HET: MAN; 2.32A {Musa acuminata} PDB: 1x1v_A* 3miu_A* 3miv_A 2bmz_A* 2bmy_A* 2bn0_A* Length = 141 Back     alignment and structure
>3mit_A Lectin; all beta sheet protein, beta prism-I fold, mannose specific, binding protein; HET: MAN; 2.32A {Musa acuminata} PDB: 1x1v_A* 3miu_A* 3miv_A 2bmz_A* 2bmy_A* 2bn0_A* Length = 141 Back     alignment and structure
>3apa_A Zymogen granule membrane protein 16; beta-prism fold, sugar binding protein; 1.65A {Homo sapiens} Length = 141 Back     alignment and structure
>3apa_A Zymogen granule membrane protein 16; beta-prism fold, sugar binding protein; 1.65A {Homo sapiens} Length = 141 Back     alignment and structure
>3apa_A Zymogen granule membrane protein 16; beta-prism fold, sugar binding protein; 1.65A {Homo sapiens} Length = 141 Back     alignment and structure
>3apa_A Zymogen granule membrane protein 16; beta-prism fold, sugar binding protein; 1.65A {Homo sapiens} Length = 141 Back     alignment and structure
>2gux_A Griffithsin, GRFT; lectins, domain swapping, mannose binding, HIV, sugar binding protein; 2.00A {Griffithsia} SCOP: b.77.3.1 Length = 138 Back     alignment and structure
>2gux_A Griffithsin, GRFT; lectins, domain swapping, mannose binding, HIV, sugar binding protein; 2.00A {Griffithsia} SCOP: b.77.3.1 Length = 138 Back     alignment and structure
>2gud_A Griffithsin, GRFT; lectins, domain swapping, mannose binding, HIV, SARS, sugar binding protein; HET: MAN BMA; 0.94A {Griffithsia} SCOP: b.77.3.1 PDB: 2guc_A* 2gty_A* 2gue_A* 2hyq_A* 2hyr_A* 2nu5_A* 2nuo_A* 3lky_A 3ll0_A 3ll2_A* 3ll1_A Length = 122 Back     alignment and structure
>2gud_A Griffithsin, GRFT; lectins, domain swapping, mannose binding, HIV, SARS, sugar binding protein; HET: MAN BMA; 0.94A {Griffithsia} SCOP: b.77.3.1 PDB: 2guc_A* 2gty_A* 2gue_A* 2hyq_A* 2hyr_A* 2nu5_A* 2nuo_A* 3lky_A 3ll0_A 3ll2_A* 3ll1_A Length = 122 Back     alignment and structure
>3aqg_A ZG16B/PAUF, zymogen granule protein 16 homolog B; beta-prism fold, unknown function; 2.75A {Homo sapiens} Length = 158 Back     alignment and structure
>3aqg_A ZG16B/PAUF, zymogen granule protein 16 homolog B; beta-prism fold, unknown function; 2.75A {Homo sapiens} Length = 158 Back     alignment and structure
>3aqg_A ZG16B/PAUF, zymogen granule protein 16 homolog B; beta-prism fold, unknown function; 2.75A {Homo sapiens} Length = 158 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query528
1zgr_A447 Mannose/glucose-specific lectin; beta-prism, sugar 100.0
2jz4_A299 Jasmonate inducible protein isolog; myrosinase bin 100.0
1zgr_A447 Mannose/glucose-specific lectin; beta-prism, sugar 100.0
2jz4_A299 Jasmonate inducible protein isolog; myrosinase bin 100.0
3p8s_A157 Jacalin; hemeagglutinin, sugars, sugar binding P; 100.0
1xxq_A161 Mannose-binding lectin; tetrameric B-prism fold, j 100.0
1xxq_A161 Mannose-binding lectin; tetrameric B-prism fold, j 100.0
3p8s_A157 Jacalin; hemeagglutinin, sugars, sugar binding P; 100.0
1ouw_A152 Lectin, agglutinin; beta-prism fold, mannose-bindi 100.0
1c3k_A147 Agglutinin; beta prism, jacalin-related, mannose, 100.0
1c3k_A147 Agglutinin; beta prism, jacalin-related, mannose, 100.0
1ouw_A152 Lectin, agglutinin; beta-prism fold, mannose-bindi 100.0
3llz_A133 MPA, agglutinin alpha chain; maclura pomifera aggl 100.0
4ddn_A160 Ipomoelin; beta prism, carbohydrate binding protei 100.0
3mit_A141 Lectin; all beta sheet protein, beta prism-I fold, 100.0
3llz_A133 MPA, agglutinin alpha chain; maclura pomifera aggl 100.0
3mit_A141 Lectin; all beta sheet protein, beta prism-I fold, 100.0
4ddn_A160 Ipomoelin; beta prism, carbohydrate binding protei 100.0
3apa_A141 Zymogen granule membrane protein 16; beta-prism fo 99.98
3apa_A141 Zymogen granule membrane protein 16; beta-prism fo 99.98
3aqg_A158 ZG16B/PAUF, zymogen granule protein 16 homolog B; 99.97
3aqg_A158 ZG16B/PAUF, zymogen granule protein 16 homolog B; 99.97
2gud_A122 Griffithsin, GRFT; lectins, domain swapping, manno 99.97
2gud_A122 Griffithsin, GRFT; lectins, domain swapping, manno 99.97
2gux_A138 Griffithsin, GRFT; lectins, domain swapping, manno 99.96
2gux_A138 Griffithsin, GRFT; lectins, domain swapping, manno 99.96
4gx7_A152 Cytolysin and hemolysin HLYA pore-forming toxin; l 97.27
4gx7_A152 Cytolysin and hemolysin HLYA pore-forming toxin; l 97.06
1xez_A721 Hemolysin, cytolysin; pore-forming toxin, Pro-toxi 95.77
1xez_A721 Hemolysin, cytolysin; pore-forming toxin, Pro-toxi 94.1
>1zgr_A Mannose/glucose-specific lectin; beta-prism, sugar binding protein; 2.50A {Parkia platycephala} PDB: 1zgs_A* Back     alignment and structure
Probab=100.00  E-value=2.6e-82  Score=678.83  Aligned_cols=356  Identities=37%  Similarity=0.676  Sum_probs=318.1

Q ss_pred             CCCcEEeccccCCCCCccccCCCCcEEEEEEEECCeeeEEEEEEeCCCCeeeecCcCCCCCC-----eeeEEEecCCCce
Q 009701            7 DKKPIAVGPWGGQNGTRWDDGVHTTVRQLVIAHGAGIDSIQIEYDNKGGSCWSEKHGGNGGT-----KFDQVKLDDPDEF   81 (528)
Q Consensus         7 ~~~~~k~Gp~GG~gG~~~ddg~~~~V~~I~V~~G~~Id~Iqf~Y~~~G~~~~~~~hGg~gG~-----~~~~~~L~~p~Ey   81 (528)
                      .+.++|++||||++|++|||+.+++|++|+|+++++||+||| .  +|+.+++..||+.+++     ..++|+|++|+||
T Consensus         2 ~~~~~k~g~~GG~gG~~~dd~~~~~v~kI~V~~g~~Id~I~f-~--dg~~~~~~~hGg~gg~~~~~g~~~~~~l~~p~Ey   78 (447)
T 1zgr_A            2 LKGMISVGPWGGSGGNYWSFKANHAITEIVIHVKDNIKSISF-K--DASGDISGTFGGKDPRENEKGDEKKIKIHWPTEY   78 (447)
T ss_dssp             --CCEEEEEEECSCSEEEEEECSSCEEEEEEEESSSEEEEEE-E--ETTSCBCCBEECCCSCSSSCCEEEEEECCTTTSC
T ss_pred             CCceEEEeceeCCCCCceecCCCCceEEEEEEeCCeEEEEEE-E--CCCeeEccccCCCCCcccccCcceEEEeCCCCCE
Confidence            457899999999999999999889999999999999999999 3  4665677899988874     4689999889999


Q ss_pred             EEEEEEEEcccCCCCceEEEEEEEEECCceeecCcccCC-ceEEeecCCCEEEEEEEEcCCCccEEEEEEEeccCcCCCc
Q 009701           82 LTSVHGHYGATNDRGSVFVRSLTFQSNRKTYGPFGVEQG-TYFSFPMTGGKIVGFHGRCGWYLDAIGIYLKSVVKKVSSN  160 (528)
Q Consensus        82 ItsVsG~yg~~~~~~~~~I~sL~F~TNk~t~gpfG~~~G-t~Fs~~~~g~kIVGF~Grsg~~LdaIGvy~~p~~~~~~~~  160 (528)
                      ||+|+|+|+.+.  +.++|++|+|+||+|+|+|||...| ++|++++.+++|||||||++++||+|||||.|+++     
T Consensus        79 it~vsg~~g~~~--g~~~I~sL~F~TN~~~~~~~G~~~ggt~Fsl~~~~~~IvGF~Grag~~ldsiG~y~~~~~~-----  151 (447)
T 1zgr_A           79 LKSISGSYGDYN--GVLVIRSLSFITNLTTYGPFGSTSGGESFSIPIADSVVVGFHGRAGYYLDALGIFVQPVPH-----  151 (447)
T ss_dssp             EEEEEEEEEEET--TEEEEEEEEEEESSCEEEEEECCSSSEEECCCEESEEEEEEEEEESSSEEEEEEEEEECTT-----
T ss_pred             EEEEEEEECCCC--CcEEEEEEEEEeCCCcccCCcCCCCCeEEEEecCCCEEEEEEEEecCceeeeeeEEecccc-----
Confidence            999999999865  5679999999999999999999987 99999988899999999999999999999987531     


Q ss_pred             chhccccccccccccccccceecccccCcccceeeeeeccCcCCCCCCcccccccccccccccccccccccCCCCCCCCC
Q 009701          161 TKAMLQTQNYYTTQNEKTGYSLVQGSVGENYDIVLAVRQKDSFGNSLPSVVSKQKDSFRKTLPVEVSKQKKSSSSSSSSD  240 (528)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~~~~~~~~~~~~~p~~~~~~k~~~~~~~p~~~~k~~~~~~~~~~~~  240 (528)
                                                                                                      
T Consensus       152 --------------------------------------------------------------------------------  151 (447)
T 1zgr_A          152 --------------------------------------------------------------------------------  151 (447)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccCCCCCCCCCCCCCeeeeeeeCCCCC-CCccCCCCceEEEEEEECCeEEEEEEEEecCCcE--EEccCCCC
Q 009701          241 DSSDDEKDKKRGGGKVPPKVDGAITYGPWGGTGGS-MFNDGTYTGIRQINLSRNVGIVSMKVCYDQDGKA--VWGSKHGG  317 (528)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~k~Gp~GG~gG~-~fddg~~~gVr~I~V~~g~~IdsIqf~Y~~~G~~--~~~~~hGg  317 (528)
                                           .+.|+++|||.+|+ .|||+.+++||+|+|+++..|++||| |+++|+.  .|+..||.
T Consensus       152 ---------------------~~~k~~~~GG~gG~~~~ddg~~~~v~kI~V~~~~~I~~i~f-y~~~g~~~~~~G~~~G~  209 (447)
T 1zgr_A          152 ---------------------GTISFGPWGGPAGDDAFNFKVGSWIKDIIIYADAAINSIAF-KDANGHCYGKFGGQDPN  209 (447)
T ss_dssp             ---------------------CCEEEEEEECSCCSEEEEEECSSCEEEEEEEESSSEEEEEE-EETTSCEEEEEECCCTT
T ss_pred             ---------------------cceeeccccCCCCCCcccCCCCCceEEEEEEeCCcEEEEEE-EeCCCcCCceeCCCcCC
Confidence                                 12467899999999 99999999999999999999999999 9999997  78888988


Q ss_pred             CCCCcceEEEecCCCcEEEEEEEEEcCcccCCCcEEEEEEEEeCCCccccCCCCCCceEEEeecCCEEEEEEEecCCCcc
Q 009701          318 TGGFRHDRVIFDYPYEILTQITGTYGPVMYMGPNIIRSLTFHTTKGKHGPFGEEQGQSFSNKIGEGKIVGFHGRDGLFLD  397 (528)
Q Consensus       318 ~gG~~~~e~~Ldyp~EyIt~V~Gt~g~~~~~~~~~I~sLtF~TNkg~~gpfG~~~Gt~F~~~~~g~~IVGF~GRaG~~ld  397 (528)
                      ..+ ..+||+||||+||||+|+|+|++..  +.++|+||+|+|||+|++|||...|++|+++.++++|||||||++++||
T Consensus       210 ~~g-~~~~f~ld~p~E~itsV~G~y~~~~--g~~~i~sL~F~Tnk~~~~~fG~~~Gt~F~l~~~~~~ivGF~Grag~~l~  286 (447)
T 1zgr_A          210 DIG-VEKKVEIDGNLEHLKSISGTYGNYK--GFEVVTSLSFITNVTKHGPFGIASGTSFSIPIEGSLVTGFHGKSGYYLD  286 (447)
T ss_dssp             CCC-EEEEEECCTTTCCEEEEEEEEEEET--TEEEEEEEEEEESSCEEEEEECCCSEEEECCEESEEEEEEEEEESSSEE
T ss_pred             CCC-ccEEEEECCCCcEEEEEEEEEcCCC--CcEEEEEEEEEeCCCcccCCcCCCCcEEEecCCCCEEEEEEEEcCCeEE
Confidence            777 4689999999999999999999753  3579999999999999999999999999999888999999999999999


Q ss_pred             EEEEEEEeCccCCCCCCCcccccccCCCccccCCccccchhhhccCCCcccccccccccCCCCCCCCCCCCCCCCcccCC
Q 009701          398 AIGVYVKVGMVTPATHPVSNAIVRADTPIAEIDNPQWSNKLLVAKQGVPEEVACGVIKEPAPCGPGPWGGDGGRAWDDGV  477 (528)
Q Consensus       398 aIGvy~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~GG~gG~~wdDg~  477 (528)
                      ||||||.|.   |  + +                                          .+.+.+||||++|++|||++
T Consensus       287 aiG~y~~~~---~--~-~------------------------------------------~~~k~g~~GG~gG~~~ddg~  318 (447)
T 1zgr_A          287 SIGIYVKPR---D--V-E------------------------------------------GSISIGPWGGSGGDPWSYTA  318 (447)
T ss_dssp             EEEEEEEEC---C--C-S------------------------------------------CCEEEEEEECSCSEEEEEEC
T ss_pred             eeEEEEecC---C--C-C------------------------------------------CcEEecCeeCCCCccccCCC
Confidence            999999863   1  0 0                                          11234799999999999999


Q ss_pred             cCceEEEEEeeCCcEeEEEEEEecCCcEEEeccccCCCc---ceeEEEEeecCC
Q 009701          478 FSGIKQIFVTRAEAVHSIQIEYDRNGQFIWSVKHGGNGG---TYTHRVMIRLTS  528 (528)
Q Consensus       478 f~gv~~I~i~~g~~i~~i~~~y~~~~~~~~~~~HG~~~g---~~~~~~~l~~p~  528 (528)
                      |++|++|+|+++++|++|||   +|++.+|+.+||+.++   ...++|+||||+
T Consensus       319 ~~~v~~I~v~~g~~I~~I~f---~~g~~~~~~~hG~~g~~~~G~~~ei~L~~p~  369 (447)
T 1zgr_A          319 NEGINQIIIYAGSNIKSVAF---KDTSGLDSATFGGVNPKDTGEKNTVSINWPS  369 (447)
T ss_dssp             SSCEEEEEEEESSSEEEEEE---EETTSCBCCCEECCSTTCCCEEEEEECCTTT
T ss_pred             CCCeEEEEEEeCCEEEEEEE---ECCCEEEccCcCCCCcCCCCceeEEEccCCC
Confidence            99999999999999999999   7899999999999873   237999999996
>2jz4_A Jasmonate inducible protein isolog; myrosinase binding protein, AT3G16450.1, SAIL, stereo-array isotope labeling, structural genomics; NMR {Arabidopsis thaliana} Back     alignment and structure
>1zgr_A Mannose/glucose-specific lectin; beta-prism, sugar binding protein; 2.50A {Parkia platycephala} PDB: 1zgs_A* Back     alignment and structure
>2jz4_A Jasmonate inducible protein isolog; myrosinase binding protein, AT3G16450.1, SAIL, stereo-array isotope labeling, structural genomics; NMR {Arabidopsis thaliana} Back     alignment and structure
>3p8s_A Jacalin; hemeagglutinin, sugars, sugar binding P; 2.00A {Artocarpus heterophyllus} Back     alignment and structure
>1xxq_A Mannose-binding lectin; tetrameric B-prism fold, jacalin-fold, sugar binding protein; 1.80A {Morus nigra} PDB: 1xxr_A* 1j4t_A 1j4s_A 1j4u_A* 1vbp_A* 1vbo_A* Back     alignment and structure
>1xxq_A Mannose-binding lectin; tetrameric B-prism fold, jacalin-fold, sugar binding protein; 1.80A {Morus nigra} PDB: 1xxr_A* 1j4t_A 1j4s_A 1j4u_A* 1vbp_A* 1vbo_A* Back     alignment and structure
>3p8s_A Jacalin; hemeagglutinin, sugars, sugar binding P; 2.00A {Artocarpus heterophyllus} Back     alignment and structure
>1ouw_A Lectin, agglutinin; beta-prism fold, mannose-binding, jacali related, sugar binding protein; 1.37A {Calystegia sepium} SCOP: b.77.3.1 Back     alignment and structure
>1c3k_A Agglutinin; beta prism, jacalin-related, mannose, sugar BIND protein; 2.00A {Helianthus tuberosus} SCOP: b.77.3.1 PDB: 1c3m_A* 1c3n_A* Back     alignment and structure
>1c3k_A Agglutinin; beta prism, jacalin-related, mannose, sugar BIND protein; 2.00A {Helianthus tuberosus} SCOP: b.77.3.1 PDB: 1c3m_A* 1c3n_A* Back     alignment and structure
>1ouw_A Lectin, agglutinin; beta-prism fold, mannose-binding, jacali related, sugar binding protein; 1.37A {Calystegia sepium} SCOP: b.77.3.1 Back     alignment and structure
>3llz_A MPA, agglutinin alpha chain; maclura pomifera agglutinin, MPA complex, GAL-beta-1, 3 lectin, sugar binding protein; HET: GAL NGA; 1.55A {Maclura pomifera} PDB: 3lly_A 1jot_A* 3lm1_A* 1m26_A* 1jac_A 1kuj_A* 1ku8_A* 1pxd_A* 1ugw_C* 1ugy_C* 1uh0_A* 1uh1_A* 1ws4_C* 1ws5_C* 1ugx_A* 1ugw_A* 1ugy_A* 1ws4_A* 1ws5_A* 1toq_A* ... Back     alignment and structure
>4ddn_A Ipomoelin; beta prism, carbohydrate binding protein, carbohydrate/sugar sugar binding protein; HET: AMG; 1.90A {Ipomoea batatas} PDB: 3r50_A* 3r52_A* 3r51_A* Back     alignment and structure
>3mit_A Lectin; all beta sheet protein, beta prism-I fold, mannose specific, binding protein; HET: MAN; 2.32A {Musa acuminata} SCOP: b.77.3.0 PDB: 1x1v_A* 3miu_A* 3miv_A 2bmz_A* 2bmy_A* 2bn0_A* Back     alignment and structure
>3llz_A MPA, agglutinin alpha chain; maclura pomifera agglutinin, MPA complex, GAL-beta-1, 3 lectin, sugar binding protein; HET: GAL NGA; 1.55A {Maclura pomifera} PDB: 3lly_A 1jot_A* 3lm1_A* 1m26_A* 1jac_A 1kuj_A* 1ku8_A* 1pxd_A* 1ugw_C* 1ugy_C* 1uh0_A* 1uh1_A* 1ws4_C* 1ws5_C* 1ugx_A* 1ugw_A* 1ugy_A* 1ws4_A* 1ws5_A* 1toq_A* ... Back     alignment and structure
>3mit_A Lectin; all beta sheet protein, beta prism-I fold, mannose specific, binding protein; HET: MAN; 2.32A {Musa acuminata} SCOP: b.77.3.0 PDB: 1x1v_A* 3miu_A* 3miv_A 2bmz_A* 2bmy_A* 2bn0_A* Back     alignment and structure
>4ddn_A Ipomoelin; beta prism, carbohydrate binding protein, carbohydrate/sugar sugar binding protein; HET: AMG; 1.90A {Ipomoea batatas} PDB: 3r50_A* 3r52_A* 3r51_A* Back     alignment and structure
>3apa_A Zymogen granule membrane protein 16; beta-prism fold, sugar binding protein; 1.65A {Homo sapiens} Back     alignment and structure
>3apa_A Zymogen granule membrane protein 16; beta-prism fold, sugar binding protein; 1.65A {Homo sapiens} Back     alignment and structure
>3aqg_A ZG16B/PAUF, zymogen granule protein 16 homolog B; beta-prism fold, unknown function; 2.75A {Homo sapiens} Back     alignment and structure
>3aqg_A ZG16B/PAUF, zymogen granule protein 16 homolog B; beta-prism fold, unknown function; 2.75A {Homo sapiens} Back     alignment and structure
>2gud_A Griffithsin, GRFT; lectins, domain swapping, mannose binding, HIV, SARS, sugar binding protein; HET: MAN BMA; 0.94A {Griffithsia} SCOP: b.77.3.1 PDB: 2guc_A* 2gty_A* 2gue_A* 2hyq_A* 2hyr_A* 2nu5_A* 2nuo_A* 3lky_A 3ll0_A 3ll2_A* 3ll1_A Back     alignment and structure
>2gud_A Griffithsin, GRFT; lectins, domain swapping, mannose binding, HIV, SARS, sugar binding protein; HET: MAN BMA; 0.94A {Griffithsia} SCOP: b.77.3.1 PDB: 2guc_A* 2gty_A* 2gue_A* 2hyq_A* 2hyr_A* 2nu5_A* 2nuo_A* 3lky_A 3ll0_A 3ll2_A* 3ll1_A Back     alignment and structure
>2gux_A Griffithsin, GRFT; lectins, domain swapping, mannose binding, HIV, sugar binding protein; 2.00A {Griffithsia} SCOP: b.77.3.1 Back     alignment and structure
>2gux_A Griffithsin, GRFT; lectins, domain swapping, mannose binding, HIV, sugar binding protein; 2.00A {Griffithsia} SCOP: b.77.3.1 Back     alignment and structure
>4gx7_A Cytolysin and hemolysin HLYA pore-forming toxin; lectin, carbohydrate-binding domain, beta-prism, pore-formin hemolysin, glycan-binding; HET: MMA; 2.85A {Vibrio cholerae} Back     alignment and structure
>4gx7_A Cytolysin and hemolysin HLYA pore-forming toxin; lectin, carbohydrate-binding domain, beta-prism, pore-formin hemolysin, glycan-binding; HET: MMA; 2.85A {Vibrio cholerae} Back     alignment and structure
>1xez_A Hemolysin, cytolysin; pore-forming toxin, Pro-toxin, water- soluble monomer, beta-prism, beta-trefoil; HET: BOG; 2.30A {Vibrio cholerae} PDB: 3o44_A Back     alignment and structure
>1xez_A Hemolysin, cytolysin; pore-forming toxin, Pro-toxin, water- soluble monomer, beta-prism, beta-trefoil; HET: BOG; 2.30A {Vibrio cholerae} PDB: 3o44_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 528
g1ugx.1148 b.77.3.1 (B:,A:) Jacalin {Jackfruit (Artocarpus he 8e-44
g1ugx.1148 b.77.3.1 (B:,A:) Jacalin {Jackfruit (Artocarpus he 6e-40
g1ugx.1148 b.77.3.1 (B:,A:) Jacalin {Jackfruit (Artocarpus he 4e-11
d1vboa_149 b.77.3.1 (A:) Artocarpin {Jackfruit (Artocarpus he 2e-43
d1vboa_149 b.77.3.1 (A:) Artocarpin {Jackfruit (Artocarpus he 4e-39
d1vboa_149 b.77.3.1 (A:) Artocarpin {Jackfruit (Artocarpus he 3e-15
d1c3ma_145 b.77.3.1 (A:) Heltuba lectin {Jerusalem artishoke 2e-42
d1c3ma_145 b.77.3.1 (A:) Heltuba lectin {Jerusalem artishoke 9e-36
d1c3ma_145 b.77.3.1 (A:) Heltuba lectin {Jerusalem artishoke 6e-12
d1ouwa_151 b.77.3.1 (A:) Calystegia sepium agglutinin {Hedge 2e-39
d1ouwa_151 b.77.3.1 (A:) Calystegia sepium agglutinin {Hedge 2e-35
d1ouwa_151 b.77.3.1 (A:) Calystegia sepium agglutinin {Hedge 1e-09
d2guda1121 b.77.3.1 (A:1-121) Griffithsin {Red alga (Griffith 6e-30
d2guda1121 b.77.3.1 (A:1-121) Griffithsin {Red alga (Griffith 5e-26
d2guda1121 b.77.3.1 (A:1-121) Griffithsin {Red alga (Griffith 1e-06
>d1vboa_ b.77.3.1 (A:) Artocarpin {Jackfruit (Artocarpus heterophyllus) [TaxId: 3489]} Length = 149 Back     information, alignment and structure
>d1vboa_ b.77.3.1 (A:) Artocarpin {Jackfruit (Artocarpus heterophyllus) [TaxId: 3489]} Length = 149 Back     information, alignment and structure
>d1vboa_ b.77.3.1 (A:) Artocarpin {Jackfruit (Artocarpus heterophyllus) [TaxId: 3489]} Length = 149 Back     information, alignment and structure
>d1c3ma_ b.77.3.1 (A:) Heltuba lectin {Jerusalem artishoke (Helianthus tuberosus) [TaxId: 4233]} Length = 145 Back     information, alignment and structure
>d1c3ma_ b.77.3.1 (A:) Heltuba lectin {Jerusalem artishoke (Helianthus tuberosus) [TaxId: 4233]} Length = 145 Back     information, alignment and structure
>d1c3ma_ b.77.3.1 (A:) Heltuba lectin {Jerusalem artishoke (Helianthus tuberosus) [TaxId: 4233]} Length = 145 Back     information, alignment and structure
>d1ouwa_ b.77.3.1 (A:) Calystegia sepium agglutinin {Hedge bindweed (Calystegia sepium) [TaxId: 47519]} Length = 151 Back     information, alignment and structure
>d1ouwa_ b.77.3.1 (A:) Calystegia sepium agglutinin {Hedge bindweed (Calystegia sepium) [TaxId: 47519]} Length = 151 Back     information, alignment and structure
>d1ouwa_ b.77.3.1 (A:) Calystegia sepium agglutinin {Hedge bindweed (Calystegia sepium) [TaxId: 47519]} Length = 151 Back     information, alignment and structure
>d2guda1 b.77.3.1 (A:1-121) Griffithsin {Red alga (Griffithsia) [TaxId: 35158]} Length = 121 Back     information, alignment and structure
>d2guda1 b.77.3.1 (A:1-121) Griffithsin {Red alga (Griffithsia) [TaxId: 35158]} Length = 121 Back     information, alignment and structure
>d2guda1 b.77.3.1 (A:1-121) Griffithsin {Red alga (Griffithsia) [TaxId: 35158]} Length = 121 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query528
d1vboa_149 Artocarpin {Jackfruit (Artocarpus heterophyllus) [ 100.0
g1ugx.1148 Jacalin {Jackfruit (Artocarpus heterophyllus) [Tax 100.0
g1ugx.1148 Jacalin {Jackfruit (Artocarpus heterophyllus) [Tax 100.0
d1vboa_149 Artocarpin {Jackfruit (Artocarpus heterophyllus) [ 100.0
d1c3ma_145 Heltuba lectin {Jerusalem artishoke (Helianthus tu 100.0
d1c3ma_145 Heltuba lectin {Jerusalem artishoke (Helianthus tu 100.0
d1ouwa_151 Calystegia sepium agglutinin {Hedge bindweed (Caly 100.0
d1ouwa_151 Calystegia sepium agglutinin {Hedge bindweed (Caly 100.0
d2guda1121 Griffithsin {Red alga (Griffithsia) [TaxId: 35158] 99.95
d2guda1121 Griffithsin {Red alga (Griffithsia) [TaxId: 35158] 99.95
>d1vboa_ b.77.3.1 (A:) Artocarpin {Jackfruit (Artocarpus heterophyllus) [TaxId: 3489]} Back     information, alignment and structure
class: All beta proteins
fold: beta-Prism I
superfamily: Mannose-binding lectins
family: Mannose-binding lectins
domain: Artocarpin
species: Jackfruit (Artocarpus heterophyllus) [TaxId: 3489]

Probab=100.00  E-value=1.7e-37  Score=284.54  Aligned_cols=144  Identities=44%  Similarity=0.773  Sum_probs=133.1

Q ss_pred             CCcEEeccccCCCCCccccCCCCcEEEEEEEECCeeeEEEEEEeCCCCeeeecCcCCCCCCeeeEEEecCCCceEEEEEE
Q 009701            8 KKPIAVGPWGGQNGTRWDDGVHTTVRQLVIAHGAGIDSIQIEYDNKGGSCWSEKHGGNGGTKFDQVKLDDPDEFLTSVHG   87 (528)
Q Consensus         8 ~~~~k~Gp~GG~gG~~~ddg~~~~V~~I~V~~G~~Id~Iqf~Y~~~G~~~~~~~hGg~gG~~~~~~~L~~p~EyItsVsG   87 (528)
                      .+++|+|||||++|++|||+.+++|++|+|++++.|++|||.|+++++..+...||+..+....++.|++|+|||++|+|
T Consensus         2 ~~~~k~GpwGG~gG~~~dd~~~~~v~~I~i~~g~~I~~i~f~Y~~~g~~~~~~~~gg~~g~~~~~~~~~~p~E~it~vsG   81 (149)
T d1vboa_           2 SQTITVGPWGGPGGNGWDDGSYTGIRQIELSYKEAIGSFSVIYDLNGDPFSGPKHTSKLPYKNVKIELKFPDEFLESVSG   81 (149)
T ss_dssp             CCCEEEEEEECSCSEEEECCCCSEEEEEEEEESSSEEEEEEEEEETTEEEECCCBCCCSCCEEEEEECCTTTCCEEEEEE
T ss_pred             CccEEEcCCcCCCCcccccCCCCCcEEEEEEECCeEEEEEEEEEcCCeEEEcCCCCCCCCCcceeEEccCccCeEEEEEE
Confidence            57999999999999999999999999999999999999999999889999999999887766788999899999999999


Q ss_pred             EEcccCCC--CceEEEEEEEEECC-ceeecCcccCCceEEeecCCCEEEEEEEEcCCCccEEEEEEE
Q 009701           88 HYGATNDR--GSVFVRSLTFQSNR-KTYGPFGVEQGTYFSFPMTGGKIVGFHGRCGWYLDAIGIYLK  151 (528)
Q Consensus        88 ~yg~~~~~--~~~~I~sL~F~TNk-~t~gpfG~~~Gt~Fs~~~~g~kIVGF~Grsg~~LdaIGvy~~  151 (528)
                      +||.+..+  ..++|+||+|+||+ |+++|||...|++|++++++++|||||||||++|||||||+.
T Consensus        82 t~G~~~~~~~~~~~I~sL~f~Tn~gr~~g~~G~~~gt~F~~~~~g~~IvGF~GrsG~~ldaiGvYv~  148 (149)
T d1vboa_          82 YTGPFSALATPTPVVRSLTFKTNKGRTFGPYGDEEGTYFNLPIENGLIVGFKGRTGDLLDAIGIHMS  148 (149)
T ss_dssp             EEECCTTSSSCSCEEEEEEEEETTSCEEEEEECCCSEEEEEEEEECEEEEEEEEESSSEEEEEEEEE
T ss_pred             EECCcCCcCCcceEEEEEEEEccCCeecCCccCCCCeEEEEeCCCCEEEEEEEEcCCeEEEEEEEEE
Confidence            99986422  34689999999998 789999999999999998899999999999999999999995
>d1vboa_ b.77.3.1 (A:) Artocarpin {Jackfruit (Artocarpus heterophyllus) [TaxId: 3489]} Back     information, alignment and structure
>d1c3ma_ b.77.3.1 (A:) Heltuba lectin {Jerusalem artishoke (Helianthus tuberosus) [TaxId: 4233]} Back     information, alignment and structure
>d1c3ma_ b.77.3.1 (A:) Heltuba lectin {Jerusalem artishoke (Helianthus tuberosus) [TaxId: 4233]} Back     information, alignment and structure
>d1ouwa_ b.77.3.1 (A:) Calystegia sepium agglutinin {Hedge bindweed (Calystegia sepium) [TaxId: 47519]} Back     information, alignment and structure
>d1ouwa_ b.77.3.1 (A:) Calystegia sepium agglutinin {Hedge bindweed (Calystegia sepium) [TaxId: 47519]} Back     information, alignment and structure
>d2guda1 b.77.3.1 (A:1-121) Griffithsin {Red alga (Griffithsia) [TaxId: 35158]} Back     information, alignment and structure
>d2guda1 b.77.3.1 (A:1-121) Griffithsin {Red alga (Griffithsia) [TaxId: 35158]} Back     information, alignment and structure