Citrus Sinensis ID: 009719
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 527 | 2.2.26 [Sep-21-2011] | |||||||
| Q93W95 | 600 | Probable methyltransferas | yes | no | 1.0 | 0.878 | 0.653 | 0.0 | |
| Q9ZPH9 | 633 | Probable methyltransferas | no | no | 0.713 | 0.593 | 0.460 | 1e-102 | |
| Q9C884 | 639 | Probable methyltransferas | no | no | 0.717 | 0.591 | 0.450 | 2e-99 | |
| B9DFI7 | 616 | Probable methyltransferas | no | no | 0.707 | 0.605 | 0.468 | 6e-98 | |
| Q94EJ6 | 621 | Probable methyltransferas | no | no | 0.703 | 0.597 | 0.465 | 7e-97 | |
| O80844 | 631 | Probable methyltransferas | no | no | 0.717 | 0.599 | 0.438 | 2e-96 | |
| Q9C6S7 | 603 | Probable methyltransferas | no | no | 0.707 | 0.618 | 0.434 | 2e-96 | |
| Q94II3 | 600 | Probable methyltransferas | no | no | 0.707 | 0.621 | 0.444 | 3e-96 | |
| Q9SZX8 | 633 | Probable methyltransferas | no | no | 0.707 | 0.589 | 0.447 | 3e-96 | |
| Q9ZW75 | 611 | Probable methyltransferas | no | no | 0.705 | 0.608 | 0.440 | 1e-87 |
| >sp|Q93W95|PMTD_ARATH Probable methyltransferase PMT13 OS=Arabidopsis thaliana GN=At4g00740 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/597 (65%), Positives = 457/597 (76%), Gaps = 70/597 (11%)
Query: 1 MGHLNLPASKR-NARQWKLLDIVSATFFGLVLLFFLLVFTPLGDSLAASGRQALLMST-S 58
MGH+NLPASKR N RQW+LLDIV+A FFG+VLLFF+L+FTPLGDS+AASGRQ LL+ST S
Sbjct: 1 MGHVNLPASKRGNPRQWRLLDIVTAAFFGIVLLFFILLFTPLGDSMAASGRQTLLLSTAS 60
Query: 59 DPRQRQRLVALIEAGHHVKPIESCPADSVDHMPCEDPRRNSQLSREMNFYRERHCPLPDQ 118
DPRQRQRLV L+EAG H++PIE CPA++V HMPCEDPRRNSQLSREMNFYRERHCPLP++
Sbjct: 61 DPRQRQRLVTLVEAGQHLQPIEYCPAEAVAHMPCEDPRRNSQLSREMNFYRERHCPLPEE 120
Query: 119 TPLCLIPPPRGYKIPVPWPESLSKV--------------------------ASF--GGSM 150
TPLCLIPPP GYKIPVPWPESL K+ +F GG+M
Sbjct: 121 TPLCLIPPPSGYKIPVPWPESLHKIWHANMPYNKIADRKGHQGWMKREGEYFTFPGGGTM 180
Query: 151 L----SENILTLS-FAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRC 205
+ I L+ + P + + + G+ +F L ++ + +F+ H S+
Sbjct: 181 FPGGAGQYIEKLAQYIPLNGGTLRTALDMGCGVASFGGTLLSQGILALSFAPRDSHKSQI 240
Query: 206 L------------------IPFTAYN-----------------ATYLIEVDRLLRPGGYL 230
+PF AY+ ATY IEVDRLLRPGGYL
Sbjct: 241 QFALERGVPAFVAMLGTRRLPFPAYSFDLMHCSRCLIPFTAYNATYFIEVDRLLRPGGYL 300
Query: 231 VISGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKKPVGESCLSNQNEFGLELC 290
VISGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKKPVG+SCL +QNEFGLELC
Sbjct: 301 VISGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKKPVGDSCLPSQNEFGLELC 360
Query: 291 DESDDPNYAWYFKLKKCVSGTSSVKGEYAVGTIPKWPQRLTKAPSRALVMKNGYDVFEAD 350
DES P+ AWYFKLK+CV+ SSVKGE+A+GTI KWP+RLTK PSRA+VMKNG DVFEAD
Sbjct: 361 DESVPPSDAWYFKLKRCVTRPSSVKGEHALGTISKWPERLTKVPSRAIVMKNGLDVFEAD 420
Query: 351 SRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTL 410
+RRW RRVAYY+++LN+KL +P +RN+MDMNAFFGGFAA L SDPVWVMNV+PARK TL
Sbjct: 421 ARRWARRVAYYRDSLNLKLKSPTVRNVMDMNAFFGGFAATLASDPVWVMNVIPARKPLTL 480
Query: 411 SVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRM 470
VIYDRGLIGVYHDWCEPFSTYPRTYD IHVSGIESLIK S+K+ CSLVDLMVEMDR+
Sbjct: 481 DVIYDRGLIGVYHDWCEPFSTYPRTYDFIHVSGIESLIKRQDSSKSRCSLVDLMVEMDRI 540
Query: 471 LRPEGTVVVRDSPEVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKSLWKLPS 527
LRPEG VV+RDSPEV+DKV+R+A+ VRW++++H+KEP S+GREKIL+ATKSLWKLPS
Sbjct: 541 LRPEGKVVIRDSPEVLDKVARMAHAVRWSSSIHEKEPESHGREKILIATKSLWKLPS 597
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: - |
| >sp|Q9ZPH9|PMTF_ARATH Probable methyltransferase PMT15 OS=Arabidopsis thaliana GN=At4g00750 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/408 (46%), Positives = 254/408 (62%), Gaps = 32/408 (7%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VASFG ++S NI+T+SFAPRD+H+AQ+QFALERG+PA + +L + RLPFPA +FDI HC
Sbjct: 228 VASFGAYLMSRNIVTMSFAPRDTHEAQVQFALERGVPAIIGVLASIRLPFPARAFDIAHC 287
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEW-----------ADLQA 251
SRCLIP+ YN TYLIEVDR+LRPGGY ++SGPP+ W + K W + ++
Sbjct: 288 SRCLIPWGQYNGTYLIEVDRVLRPGGYWILSGPPINWQRHWKGWERTRDDLNSEQSQIER 347
Query: 252 VARALCYELIAVDGNTVIWKKPVGE-SCLSNQNEFGLELCDESDDPNYAWYFKLKKCVSG 310
VAR+LC+ + + +W+KP C N+ G PN WY KL+ C++
Sbjct: 348 VARSLCWRKLVQREDLAVWQKPTNHVHCKRNRIALGRPPFCHRTLPNQGWYTKLETCLTP 407
Query: 311 TSSVKG----EYAVGTIPKWPQRLTKAPSRALVMKNG------YDVFEADSRRWRRRVAY 360
V G E A G + +WP+RL P R +K+G D F +++ +W+RRV+Y
Sbjct: 408 LPEVTGSEIKEVAGGQLARWPERLNALPPR---IKSGSLEGITEDEFVSNTEKWQRRVSY 464
Query: 361 YKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGLI 419
YK T RN +DMNA GGFA+AL DPVWVMNVVP S +TL VIY+RGLI
Sbjct: 465 YKKYDQQLAETGRYRNFLDMNAHLGGFASALVDDPVWVMNVVPVEASVNTLGVIYERGLI 524
Query: 420 GVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVV 479
G Y +WCE STYPRTYD IH + SL K+ C + D+++EMDR+LRP+G+V++
Sbjct: 525 GTYQNWCEAMSTYPRTYDFIHADSVFSLY------KDRCDMEDILLEMDRILRPKGSVII 578
Query: 480 RDSPEVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKSLWKLPS 527
RD +V+ KV +I + ++W + D E G REKIL K W P+
Sbjct: 579 RDDIDVLTKVKKITDAMQWEGRIGDHENGPLEREKILFLVKEYWTAPA 626
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q9C884|PMTI_ARATH Probable methyltransferase PMT18 OS=Arabidopsis thaliana GN=At1g33170 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 363 bits (931), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/404 (45%), Positives = 252/404 (62%), Gaps = 26/404 (6%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VASFG +L +I+ +SFAPRD+H+AQ+QFALERG+PA + ++G+RRLP+PA +FD+ HC
Sbjct: 242 VASFGAYLLKRDIVAMSFAPRDTHEAQVQFALERGVPAIIGIMGSRRLPYPARAFDLAHC 301
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWA-----------DLQA 251
SRCLIP+ + YL EVDR+LRPGGY ++SGPP+ W K K W ++
Sbjct: 302 SRCLIPWFQNDGLYLTEVDRVLRPGGYWILSGPPINWKKYWKGWERSQEDLKQEQDSIED 361
Query: 252 VARALCYELIAVDGNTVIWKKPVGESCLSNQNEFGLE--LCDESDDPNYAWYFKLKKCVS 309
AR+LC++ + G+ IW+KP+ + LC +SD P++AWY L+ CV+
Sbjct: 362 AARSLCWKKVTEKGDLSIWQKPINHVECNKLKRVHKTPPLCSKSDLPDFAWYKDLESCVT 421
Query: 310 --GTSSVKGEYAVGTIPKWPQRLTKAPSRAL---VMKNGYDVFEADSRRWRRRVAYYKNT 364
++ E+A G + WP R P R + + + F D+ W+ R++YYK
Sbjct: 422 PLPEANSSDEFAGGALEDWPNRAFAVPPRIIGGTIPDINAEKFREDNEVWKERISYYKQI 481
Query: 365 LNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPAR-KSSTLSVIYDRGLIGVYH 423
+ +L RNIMDMNA+ GGFAAA+ P WVMNVVP + TL VI++RG IG Y
Sbjct: 482 MP-ELSRGRFRNIMDMNAYLGGFAAAMMKYPSWVMNVVPVDAEKQTLGVIFERGFIGTYQ 540
Query: 424 DWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP 483
DWCE FSTYPRTYDLIH G+ S+ +N C + +++EMDR+LRPEGTVV RD+
Sbjct: 541 DWCEGFSTYPRTYDLIHAGGLFSIY------ENRCDVTLILLEMDRILRPEGTVVFRDTV 594
Query: 484 EVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKSLWKLPS 527
E++ K+ I N +RW + + D E G EKIL+A KS W PS
Sbjct: 595 EMLTKIQSITNGMRWKSRILDHERGPFNPEKILLAVKSYWTGPS 638
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|B9DFI7|PMT2_ARATH Probable methyltransferase PMT2 OS=Arabidopsis thaliana GN=At1g26850 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 358 bits (919), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 187/399 (46%), Positives = 255/399 (63%), Gaps = 26/399 (6%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VAS+G + S N+ +SFAPRDSH+AQ+QFALERG+PA + +LGT +LP+P +FD+ HC
Sbjct: 218 VASWGAYLWSRNVRAMSFAPRDSHEAQVQFALERGVPAVIGVLGTIKLPYPTRAFDMAHC 277
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQW---------PKQD--KEWADLQA 251
SRCLIP+ A + YL+EVDR+LRPGGY ++SGPP+ W PK+D +E ++
Sbjct: 278 SRCLIPWGANDGMYLMEVDRVLRPGGYWILSGPPINWKVNYKAWQRPKEDLQEEQRKIEE 337
Query: 252 VARALCYELIAVDGNTVIWKKPVG-ESCLSNQNEFGLELCDESDDPNYAWYFKLKKCVS- 309
A+ LC+E G IW+K V E+C S Q++ C ++DD + WY K++ C++
Sbjct: 338 AAKLLCWEKKYEHGEIAIWQKRVNDEACRSRQDDPRANFC-KTDDTDDVWYKKMEACITP 396
Query: 310 -GTSSVKGEYAVGTIPKWPQRLTKAPSR---ALVMKNGYDVFEADSRRWRRRVAYYKNTL 365
+S E A G + +P RL P R + D +E D+R+W++ V YK +
Sbjct: 397 YPETSSSDEVAGGELQAFPDRLNAVPPRISSGSISGVTVDAYEDDNRQWKKHVKAYKR-I 455
Query: 366 NVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPA-RKSSTLSVIYDRGLIGVYHD 424
N L T RNIMDMNA FGGFAAAL S +WVMNVVP + + L V+Y+RGLIG+YHD
Sbjct: 456 NSLLDTGRYRNIMDMNAGFGGFAAALESQKLWVMNVVPTIAEKNRLGVVYERGLIGIYHD 515
Query: 425 WCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPE 484
WCE FSTYPRTYDLIH + + SL KN C+ D+++EMDR+LRPEG V++RD +
Sbjct: 516 WCEAFSTYPRTYDLIHANHLFSLY------KNKCNADDILLEMDRILRPEGAVIIRDDVD 569
Query: 485 VIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKSLW 523
+ KV RI +RW A + D E G EK+L+A K W
Sbjct: 570 TLIKVKRIIAGMRWDAKLVDHEDGPLVPEKVLIAVKQYW 608
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q94EJ6|PMTE_ARATH Probable methyltransferase PMT14 OS=Arabidopsis thaliana GN=At4g18030 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 355 bits (910), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 185/397 (46%), Positives = 253/397 (63%), Gaps = 26/397 (6%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VAS+G ML N+LT+SFAPRD+H+AQ+QFALERG+PA +A+LG+ LP+PA +FD+ C
Sbjct: 217 VASWGAYMLKRNVLTMSFAPRDNHEAQVQFALERGVPAIIAVLGSILLPYPARAFDMAQC 276
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEW----ADLQA------- 251
SRCLIP+TA TYL+EVDR+LRPGGY V+SGPP+ W K W A+L A
Sbjct: 277 SRCLIPWTANEGTYLMEVDRVLRPGGYWVLSGPPINWKTWHKTWNRTKAELNAEQKRIEG 336
Query: 252 VARALCYELIAVDGNTVIWKKPVGESCLSNQNEFGLELCDESDDPNYAWYFKLKKCVSGT 311
+A +LC+E G+ I++K + + ++ C D + WY +++ CV+
Sbjct: 337 IAESLCWEKKYEKGDIAIFRKKINDRSCDRSTP--VDTCKRKDTDD-VWYKEIETCVTPF 393
Query: 312 SSVKGEYAV--GTIPKWPQRLTKAP---SRALVMKNGYDVFEADSRRWRRRVAYYKNTLN 366
V E V G + K+P+RL P S+ L+ + ++ D W++RV YK +N
Sbjct: 394 PKVSNEEEVAGGKLKKFPERLFAVPPSISKGLINGVDEESYQEDINLWKKRVTGYKR-IN 452
Query: 367 VKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIGVYHDWC 426
+G+ RN+MDMNA GGFAAAL S WVMNV+P +TLSV+Y+RGLIG+YHDWC
Sbjct: 453 RLIGSTRYRNVMDMNAGLGGFAAALESPKSWVMNVIPTINKNTLSVVYERGLIGIYHDWC 512
Query: 427 EPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVI 486
E FSTYPRTYD IH SG+ SL ++SC L D+++E DR+LRPEG V+ RD +V+
Sbjct: 513 EGFSTYPRTYDFIHASGVFSLY------QHSCKLEDILLETDRILRPEGIVIFRDEVDVL 566
Query: 487 DKVSRIANTVRWTAAVHDKEPGSNGREKILVATKSLW 523
+ V +I + +RW + D E G EKILVATK W
Sbjct: 567 NDVRKIVDGMRWDTKLMDHEDGPLVPEKILVATKQYW 603
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|O80844|PMTG_ARATH Probable methyltransferase PMT16 OS=Arabidopsis thaliana GN=At2g45750 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 353 bits (906), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 179/408 (43%), Positives = 248/408 (60%), Gaps = 30/408 (7%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VASFG +LS NI T+SFAPRD+H+AQ+QFALERG+PA + ++ T RLP+P+ +FD+ HC
Sbjct: 219 VASFGAYLLSRNITTMSFAPRDTHEAQVQFALERGVPAMIGIMATIRLPYPSRAFDLAHC 278
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEW-----------ADLQA 251
SRCLIP+ + YL+EVDR+LRPGGY ++SGPP+ W K+ K W ++
Sbjct: 279 SRCLIPWGQNDGAYLMEVDRVLRPGGYWILSGPPINWQKRWKGWERTMDDLNAEQTQIEQ 338
Query: 252 VARALCYELIAVDGNTVIWKKPVGESCLSNQNEF--GLELCDESDDPNYAWYFKLKKCVS 309
VAR+LC++ + + IW+KP E E C DP+ AWY K+ C++
Sbjct: 339 VARSLCWKKVVQRDDLAIWQKPFNHIDCKKTREVLKNPEFCRHDQDPDMAWYTKMDSCLT 398
Query: 310 GTSSVKG-----EYAVGTIPKWPQRLTKAPSR---ALVMKNGYDVFEADSRRWRRRVAYY 361
V A G + KWP RL P R + + + F +++ W++RV+YY
Sbjct: 399 PLPEVDDAEDLKTVAGGKVEKWPARLNAIPPRVNKGALEEITPEAFLENTKLWKQRVSYY 458
Query: 362 KNTLNVKLG-TPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPAR-KSSTLSVIYDRGLI 419
K L+ +LG T RN++DMNA+ GGFAAAL DPVWVMNVVP K +TL VIY+RGLI
Sbjct: 459 KK-LDYQLGETGRYRNLVDMNAYLGGFAAALADDPVWVMNVVPVEAKLNTLGVIYERGLI 517
Query: 420 GVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVV 479
G Y +WCE STYPRTYD IH + +L + C ++++EMDR+LRP G V++
Sbjct: 518 GTYQNWCEAMSTYPRTYDFIHADSVFTLY------QGQCEPEEILLEMDRILRPGGGVII 571
Query: 480 RDSPEVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKSLWKLPS 527
RD +V+ KV + + W + D E G + REKI A K W +P+
Sbjct: 572 RDDVDVLIKVKELTKGLEWEGRIADHEKGPHEREKIYYAVKQYWTVPA 619
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q9C6S7|PMTK_ARATH Probable methyltransferase PMT20 OS=Arabidopsis thaliana GN=At1g31850 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 353 bits (906), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/396 (43%), Positives = 254/396 (64%), Gaps = 23/396 (5%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VAS+GG +L IL+LS APRD+H+AQ+QFALERGIPA + ++ T+RLPFP+ +FD+ HC
Sbjct: 209 VASWGGDLLDRGILSLSLAPRDNHEAQVQFALERGIPAILGIISTQRLPFPSNAFDMAHC 268
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPK-----------QDKEWADLQA 251
SRCLIP+T + YL+E+ R++RPGG+ V+SGPPV + + Q ++ LQ+
Sbjct: 269 SRCLIPWTEFGGIYLLEIHRIVRPGGFWVLSGPPVNYNRRWRGWNTTMEDQKSDYNKLQS 328
Query: 252 VARALCYELIAVDGNTVIWKKPVGESC---LSNQNEFGLELCDESDDPNYAWYFKLKKCV 308
+ ++C++ A + +W+K +SC ++ E CD+S +P+ AWY L+ CV
Sbjct: 329 LLTSMCFKKYAQKDDIAVWQKLSDKSCYDKIAKNMEAYPPKCDDSIEPDSAWYTPLRPCV 388
Query: 309 SGTSSVKGEYAVGTIPKWPQRLTKAPSRALVMKNG-YDVFEADSRRWRRRVAYYKNTLNV 367
+ + +G+IPKWP+RL AP R + G + + D +W+ RV +YK L
Sbjct: 389 VAPTPKVKKSGLGSIPKWPERLHVAPERIGDVHGGSANSLKHDDGKWKNRVKHYKKVLPA 448
Query: 368 KLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCE 427
LGT IRN+MDMN +GGF+AAL DP+WVMNVV + +++L V++DRGLIG YHDWCE
Sbjct: 449 -LGTDKIRNVMDMNTVYGGFSAALIEDPIWVMNVVSSYSANSLPVVFDRGLIGTYHDWCE 507
Query: 428 PFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVID 487
FSTYPRTYDL+H+ + +L + C + +++EMDR+LRP G V++R+S +D
Sbjct: 508 AFSTYPRTYDLLHLDSLFTL------ESHRCEMKYILLEMDRILRPSGYVIIRESSYFMD 561
Query: 488 KVSRIANTVRWTAAVHDKEPGSNGREKILVATKSLW 523
++ +A +RW+ + E EKILV K LW
Sbjct: 562 AITTLAKGIRWSCRREETEYAVKS-EKILVCQKKLW 596
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q94II3|PMTL_ARATH Probable methyltransferase PMT21 OS=Arabidopsis thaliana GN=ERD3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 352 bits (904), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 176/396 (44%), Positives = 248/396 (62%), Gaps = 23/396 (5%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VAS+GG +L ILT+S APRD+H+AQ+QFALERGIPA + ++ T+RLPFP+ SFD+ HC
Sbjct: 203 VASWGGDLLDRGILTVSLAPRDNHEAQVQFALERGIPAILGIISTQRLPFPSNSFDMAHC 262
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEW-----------ADLQA 251
SRCLIP+T + YL+EV R+LRPGG+ V+SGPPV + + K W LQ
Sbjct: 263 SRCLIPWTEFGGVYLLEVHRILRPGGFWVLSGPPVNYENRWKGWDTTIEEQRSNYEKLQE 322
Query: 252 VARALCYELIAVDGNTVIWKKPVGESC---LSNQNEFGLELCDESDDPNYAWYFKLKKCV 308
+ ++C+++ A + +W+K C LSN + CD+S +P+ AWY L+ CV
Sbjct: 323 LLSSMCFKMYAKKDDIAVWQKSPDNLCYNKLSNDPDAYPPKCDDSLEPDSAWYTPLRPCV 382
Query: 309 SGTSSVKGEYAVGTIPKWPQRLTKAPSRALVMKNGY-DVFEADSRRWRRRVAYYKNTLNV 367
S + + + PKWP+RL P R + G +VF+ D +W+ R +YK L
Sbjct: 383 VVPSPKLKKTDLESTPKWPERLHTTPERISDVPGGNGNVFKHDDSKWKTRAKHYKKLLPA 442
Query: 368 KLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCE 427
+G+ IRN+MDMN +GG AAAL +DP+WVMNVV + ++TL V++DRGLIG YHDWCE
Sbjct: 443 -IGSDKIRNVMDMNTAYGGLAAALVNDPLWVMNVVSSYAANTLPVVFDRGLIGTYHDWCE 501
Query: 428 PFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVID 487
FSTYPRTYDL+HV G+ + S C + +M+EMDR+LRP G ++R+S D
Sbjct: 502 AFSTYPRTYDLLHVDGLFT------SESQRCDMKYVMLEMDRILRPSGYAIIRESSYFAD 555
Query: 488 KVSRIANTVRWTAAVHDKEPGSNGREKILVATKSLW 523
++ +A +RW+ E S EK+L+ K LW
Sbjct: 556 SIASVAKELRWSCRKEQTESAS-ANEKLLICQKKLW 590
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q9SZX8|PMTH_ARATH Probable methyltransferase PMT17 OS=Arabidopsis thaliana GN=At4g10440 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 352 bits (904), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 179/400 (44%), Positives = 252/400 (63%), Gaps = 27/400 (6%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VASFG +L +I+ +SFAPRD+H+AQ+QFALERG+PA + ++G+RRLP+PA +FD+ HC
Sbjct: 225 VASFGAYLLKRDIMAVSFAPRDTHEAQVQFALERGVPAIIGIMGSRRLPYPARAFDLAHC 284
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQ-----------DKEWADLQA 251
SRCLIP+ + YL+EVDR+LRPGGY ++SGPP+ W + KE ++
Sbjct: 285 SRCLIPWFKNDGLYLMEVDRVLRPGGYWILSGPPINWKQYWRGWERTEEDLKKEQDSIED 344
Query: 252 VARALCYELIAVDGNTVIWKKPVG--ESCLSNQNEFGLELCDESDDPNYAWYFKLKKCVS 309
VA++LC++ + G+ IW+KP+ E QN +C SD+ + AWY L+ C++
Sbjct: 345 VAKSLCWKKVTEKGDLSIWQKPLNHIECKKLKQNNKSPPIC-SSDNADSAWYKDLETCIT 403
Query: 310 GTSSVKG--EYAVGTIPKWPQRLTKAPSRAL---VMKNGYDVFEADSRRWRRRVAYYKNT 364
+ A G + WP R P R + + + + F D+ W+ R+A+YK
Sbjct: 404 PLPETNNPDDSAGGALEDWPDRAFAVPPRIIRGTIPEMNAEKFREDNEVWKERIAHYKKI 463
Query: 365 LNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPAR-KSSTLSVIYDRGLIGVYH 423
+ +L RNIMDMNAF GGFAA++ P WVMNVVP + TL VIY+RGLIG Y
Sbjct: 464 V-PELSHGRFRNIMDMNAFLGGFAASMLKYPSWVMNVVPVDAEKQTLGVIYERGLIGTYQ 522
Query: 424 DWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP 483
DWCE FSTYPRTYD+IH G+ SL ++ C L +++EMDR+LRPEGTVV+RD+
Sbjct: 523 DWCEGFSTYPRTYDMIHAGGLFSLY------EHRCDLTLILLEMDRILRPEGTVVLRDNV 576
Query: 484 EVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKSLW 523
E ++KV +I ++W + + D E G EKILVA K+ W
Sbjct: 577 ETLNKVEKIVKGMKWKSQIVDHEKGPFNPEKILVAVKTYW 616
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q9ZW75|PMTJ_ARATH Probable methyltransferase PMT19 OS=Arabidopsis thaliana GN=At2g43200 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/395 (44%), Positives = 237/395 (60%), Gaps = 23/395 (5%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VASFG +L+ ILT+S APRD H+AQ+QFALERG+PA + +L T +LP+P+ SFD+VHC
Sbjct: 224 VASFGAFLLNYKILTMSIAPRDIHEAQVQFALERGLPAMLGVLSTYKLPYPSRSFDMVHC 283
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPP----VQWPKQDKEWADLQA------- 251
SRCL+ +T+Y+ YL+EVDR+LRP GY V+SGPP V++ Q ++ +LQ
Sbjct: 284 SRCLVNWTSYDGLYLMEVDRVLRPEGYWVLSGPPVASRVKFKNQKRDSKELQNQMEKLND 343
Query: 252 VARALCYELIAVDGNTVIWKKPVGE-SCLSNQNEFGLELCDESDDPNYAWYFKLKKCVSG 310
V R LC+E IA VIW+KP C S DP+ AWY +++ C++
Sbjct: 344 VFRRLCWEKIAESYPVVIWRKPSNHLQCRKRLKALKFPGLCSSSDPDAAWYKEMEPCITP 403
Query: 311 TSSVKGEYAVGTIPKWPQRLTKAPSRALVMKNGYDV--FEADSRRWRRRVAYYKNTLNVK 368
V + WP+RL P G + F+AD+ W+RRV YY
Sbjct: 404 LPDVNDTNKT-VLKNWPERLNHVPRMKTGSIQGTTIAGFKADTNLWQRRVLYYDTKFKF- 461
Query: 369 LGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPAR-KSSTLSVIYDRGLIGVYHDWCE 427
L RN++DMNA GGFAAAL P+WVMNVVP K +TL V+YDRGLIG Y +WCE
Sbjct: 462 LSNGKYRNVIDMNAGLGGFAAALIKYPMWVMNVVPFDLKPNTLGVVYDRGLIGTYMNWCE 521
Query: 428 PFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVID 487
STYPRTYDLIH +G+ SL + C +VD+++EM R+LRPEG V++RD +V+
Sbjct: 522 ALSTYPRTYDLIHANGVFSLY------LDKCDIVDILLEMQRILRPEGAVIIRDRFDVLV 575
Query: 488 KVSRIANTVRWTAAVHDKEPGSNGREKILVATKSL 522
KV I N +RW ++ ++ IL+ S+
Sbjct: 576 KVKAITNQMRWNGTMYPEDNSVFDHGTILIVDNSI 610
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 527 | ||||||
| 18411430 | 600 | putative methyltransferase PMT13 [Arabid | 1.0 | 0.878 | 0.653 | 0.0 | |
| 297810097 | 602 | hypothetical protein ARALYDRAFT_490495 [ | 1.0 | 0.875 | 0.656 | 0.0 | |
| 225453730 | 597 | PREDICTED: probable methyltransferase PM | 1.0 | 0.882 | 0.639 | 0.0 | |
| 449432183 | 593 | PREDICTED: probable methyltransferase PM | 0.726 | 0.645 | 0.830 | 0.0 | |
| 224130116 | 594 | predicted protein [Populus trichocarpa] | 0.726 | 0.644 | 0.838 | 0.0 | |
| 255541472 | 507 | conserved hypothetical protein [Ricinus | 0.726 | 0.755 | 0.828 | 0.0 | |
| 356520463 | 594 | PREDICTED: probable methyltransferase PM | 0.719 | 0.638 | 0.793 | 0.0 | |
| 356505029 | 597 | PREDICTED: probable methyltransferase PM | 0.713 | 0.629 | 0.787 | 0.0 | |
| 356568320 | 596 | PREDICTED: probable methyltransferase PM | 0.724 | 0.640 | 0.817 | 0.0 | |
| 356532064 | 597 | PREDICTED: probable methyltransferase PM | 0.724 | 0.639 | 0.798 | 0.0 |
| >gi|18411430|ref|NP_567184.1| putative methyltransferase PMT13 [Arabidopsis thaliana] gi|75163241|sp|Q93W95.1|PMTD_ARATH RecName: Full=Probable methyltransferase PMT13 gi|16648931|gb|AAL24317.1| Unknown protein [Arabidopsis thaliana] gi|16649087|gb|AAL24395.1| Unknown protein [Arabidopsis thaliana] gi|23197886|gb|AAN15470.1| Unknown protein [Arabidopsis thaliana] gi|30725428|gb|AAP37736.1| At4g00740 [Arabidopsis thaliana] gi|332656528|gb|AEE81928.1| putative methyltransferase PMT13 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/597 (65%), Positives = 457/597 (76%), Gaps = 70/597 (11%)
Query: 1 MGHLNLPASKR-NARQWKLLDIVSATFFGLVLLFFLLVFTPLGDSLAASGRQALLMST-S 58
MGH+NLPASKR N RQW+LLDIV+A FFG+VLLFF+L+FTPLGDS+AASGRQ LL+ST S
Sbjct: 1 MGHVNLPASKRGNPRQWRLLDIVTAAFFGIVLLFFILLFTPLGDSMAASGRQTLLLSTAS 60
Query: 59 DPRQRQRLVALIEAGHHVKPIESCPADSVDHMPCEDPRRNSQLSREMNFYRERHCPLPDQ 118
DPRQRQRLV L+EAG H++PIE CPA++V HMPCEDPRRNSQLSREMNFYRERHCPLP++
Sbjct: 61 DPRQRQRLVTLVEAGQHLQPIEYCPAEAVAHMPCEDPRRNSQLSREMNFYRERHCPLPEE 120
Query: 119 TPLCLIPPPRGYKIPVPWPESLSKV--------------------------ASF--GGSM 150
TPLCLIPPP GYKIPVPWPESL K+ +F GG+M
Sbjct: 121 TPLCLIPPPSGYKIPVPWPESLHKIWHANMPYNKIADRKGHQGWMKREGEYFTFPGGGTM 180
Query: 151 L----SENILTLS-FAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRC 205
+ I L+ + P + + + G+ +F L ++ + +F+ H S+
Sbjct: 181 FPGGAGQYIEKLAQYIPLNGGTLRTALDMGCGVASFGGTLLSQGILALSFAPRDSHKSQI 240
Query: 206 L------------------IPFTAYN-----------------ATYLIEVDRLLRPGGYL 230
+PF AY+ ATY IEVDRLLRPGGYL
Sbjct: 241 QFALERGVPAFVAMLGTRRLPFPAYSFDLMHCSRCLIPFTAYNATYFIEVDRLLRPGGYL 300
Query: 231 VISGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKKPVGESCLSNQNEFGLELC 290
VISGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKKPVG+SCL +QNEFGLELC
Sbjct: 301 VISGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKKPVGDSCLPSQNEFGLELC 360
Query: 291 DESDDPNYAWYFKLKKCVSGTSSVKGEYAVGTIPKWPQRLTKAPSRALVMKNGYDVFEAD 350
DES P+ AWYFKLK+CV+ SSVKGE+A+GTI KWP+RLTK PSRA+VMKNG DVFEAD
Sbjct: 361 DESVPPSDAWYFKLKRCVTRPSSVKGEHALGTISKWPERLTKVPSRAIVMKNGLDVFEAD 420
Query: 351 SRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTL 410
+RRW RRVAYY+++LN+KL +P +RN+MDMNAFFGGFAA L SDPVWVMNV+PARK TL
Sbjct: 421 ARRWARRVAYYRDSLNLKLKSPTVRNVMDMNAFFGGFAATLASDPVWVMNVIPARKPLTL 480
Query: 411 SVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRM 470
VIYDRGLIGVYHDWCEPFSTYPRTYD IHVSGIESLIK S+K+ CSLVDLMVEMDR+
Sbjct: 481 DVIYDRGLIGVYHDWCEPFSTYPRTYDFIHVSGIESLIKRQDSSKSRCSLVDLMVEMDRI 540
Query: 471 LRPEGTVVVRDSPEVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKSLWKLPS 527
LRPEG VV+RDSPEV+DKV+R+A+ VRW++++H+KEP S+GREKIL+ATKSLWKLPS
Sbjct: 541 LRPEGKVVIRDSPEVLDKVARMAHAVRWSSSIHEKEPESHGREKILIATKSLWKLPS 597
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297810097|ref|XP_002872932.1| hypothetical protein ARALYDRAFT_490495 [Arabidopsis lyrata subsp. lyrata] gi|297318769|gb|EFH49191.1| hypothetical protein ARALYDRAFT_490495 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/599 (65%), Positives = 456/599 (76%), Gaps = 72/599 (12%)
Query: 1 MGHLNLPASKR--NARQWKLLDIVSATFFGLVLLFFLLVFTPLGDSLAASGRQALLMST- 57
MGHLNLPASKR N RQW LLDIV+A FFG+VLLFF+L+FTPLGDS+AASGRQ LL+ST
Sbjct: 1 MGHLNLPASKRSSNPRQWCLLDIVTAAFFGIVLLFFILLFTPLGDSMAASGRQTLLLSTA 60
Query: 58 SDPRQRQRLVALIEAGHHVKPIESCPADSVDHMPCEDPRRNSQLSREMNFYRERHCPLPD 117
SDPRQRQRLV L+EAG H++PIE CPA++V HMPCEDPRRNSQLSREMNFYRERHCPLP+
Sbjct: 61 SDPRQRQRLVTLVEAGQHLQPIEYCPAEAVAHMPCEDPRRNSQLSREMNFYRERHCPLPE 120
Query: 118 QTPLCLIPPPRGYKIPVPWPESLSKVA---------------------------SF--GG 148
+TPLCLIPPP GYKIPVPWPESL KV +F GG
Sbjct: 121 ETPLCLIPPPSGYKIPVPWPESLHKVLWHANMPYNKIADRKGHQGWMKREGEYFTFPGGG 180
Query: 149 SML----SENILTLS-FAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCS 203
+M + I L+ + P + + + G+ +F L ++ + +F+ H S
Sbjct: 181 TMFPGGAGQYIEKLAQYIPLNGGTLRTALDMGCGVASFGGTLLSQGILALSFAPRDSHKS 240
Query: 204 RCL------------------IPFTAYN-----------------ATYLIEVDRLLRPGG 228
+ +PF AY+ ATY IEVDRLLRPGG
Sbjct: 241 QIQFALERGVPAFVAMLGTRRLPFPAYSFDLMHCSRCLIPFTAYNATYFIEVDRLLRPGG 300
Query: 229 YLVISGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKKPVGESCLSNQNEFGLE 288
YLVISGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKKPVG+SCL +QNEFGLE
Sbjct: 301 YLVISGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKKPVGDSCLPSQNEFGLE 360
Query: 289 LCDESDDPNYAWYFKLKKCVSGTSSVKGEYAVGTIPKWPQRLTKAPSRALVMKNGYDVFE 348
LCDES P+ AWYFKLK+CV+ SSVKGE A+GTI KWP+RLTK PSRA+VMKNG DVFE
Sbjct: 361 LCDESVPPSDAWYFKLKRCVTRPSSVKGEQALGTISKWPERLTKVPSRAIVMKNGLDVFE 420
Query: 349 ADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSS 408
AD+RRW RRVAYY+++LN+KL +P +RN+MDMNAFFGGFAAAL SDPVWVMNV+PARK
Sbjct: 421 ADARRWARRVAYYRDSLNLKLKSPTVRNVMDMNAFFGGFAAALASDPVWVMNVIPARKPL 480
Query: 409 TLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMD 468
TL VIYDRGLIGVYHDWCEPFSTYPRTYD IHVSGIESLIK S+K+ CSLVDLMVEMD
Sbjct: 481 TLDVIYDRGLIGVYHDWCEPFSTYPRTYDFIHVSGIESLIKRQDSSKSRCSLVDLMVEMD 540
Query: 469 RMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKSLWKLPS 527
R+LRPEG VV+RDSPEV+DKV+R+A+ VRW++++H+KEP S+GREKIL+ATKSLWKLPS
Sbjct: 541 RILRPEGKVVIRDSPEVLDKVARMAHAVRWSSSIHEKEPESHGREKILIATKSLWKLPS 599
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225453730|ref|XP_002272714.1| PREDICTED: probable methyltransferase PMT13 [Vitis vinifera] gi|296089064|emb|CBI38767.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/594 (63%), Positives = 431/594 (72%), Gaps = 67/594 (11%)
Query: 1 MGHLNLPASKRNARQWKLLDIVSATFFGLVLLFFLLVFTPLGD----------------- 43
MGHLNLP+SKRNARQ++LLD+V+A+FFG+V++FFLLVFTPLGD
Sbjct: 1 MGHLNLPSSKRNARQYRLLDLVTASFFGIVIIFFLLVFTPLGDSLAASGRQALLLSTADP 60
Query: 44 -------SLAASGRQALL----------MSTSDPRQRQRLVALIEAGHHVK-------PI 79
+L +G+Q + M DPR+ +L + + P+
Sbjct: 61 RQRQRLVALVEAGQQQAIEACPAEEVDHMPCEDPRRNSQLSREMNFYRERQCPLPAETPL 120
Query: 80 ESCPADSVDHMPCEDPRR-----NSQLSREMNFYRERHCPLPDQTPLCLIPPPRGYKIP- 133
P H+P P +S + R+ H + + I P G P
Sbjct: 121 CLIPPPDGYHIPVRWPDSLHKIWHSNMPHNKIADRKGHQGWMKEEGMYFIFPGGGTMFPD 180
Query: 134 --VPWPESLSK------------------VASFGGSMLSENILTLSFAPRDSHKAQIQFA 173
+ E LS+ VASFGG +L++ ILT SFAPRDSHK+QIQFA
Sbjct: 181 GAEQYIEKLSQYIPLTGGVLRTALDMGCGVASFGGYLLNQGILTFSFAPRDSHKSQIQFA 240
Query: 174 LERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVIS 233
LERGIPA VAMLGTRRLPFPAFSFD+VHCSRCLIPFTAYNATY +EVDRLLRPGGYLVIS
Sbjct: 241 LERGIPALVAMLGTRRLPFPAFSFDLVHCSRCLIPFTAYNATYFLEVDRLLRPGGYLVIS 300
Query: 234 GPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKKPVGESCLSNQNEFGLELCDES 293
GPPV WPKQDKEWADLQAVARALCYEL AVDGNT IWKKP G+SCL NQNEFGLELCDES
Sbjct: 301 GPPVLWPKQDKEWADLQAVARALCYELKAVDGNTAIWKKPAGDSCLPNQNEFGLELCDES 360
Query: 294 DDPNYAWYFKLKKCVSGTSSVKGEYAVGTIPKWPQRLTKAPSRALVMKNGYDVFEADSRR 353
DD +YAWYFKLKKCV+ SSVK + VG IP WP RLTKAPSRA ++KNG DVFEAD+RR
Sbjct: 361 DDSSYAWYFKLKKCVTRISSVKDDQVVGMIPNWPDRLTKAPSRATLLKNGIDVFEADTRR 420
Query: 354 WRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVI 413
W RRVAYYKN+LN+KLGT AIRN+MDMNAFFGGFAAALTSDPVWVMNVVP RK STL VI
Sbjct: 421 WARRVAYYKNSLNLKLGTAAIRNVMDMNAFFGGFAAALTSDPVWVMNVVPPRKPSTLGVI 480
Query: 414 YDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRP 473
YDRGLIGVYHDWCEPFSTYPRTYDLIHV+ IESLIK GS KN C+LVDLMVEMDR+LRP
Sbjct: 481 YDRGLIGVYHDWCEPFSTYPRTYDLIHVTSIESLIKILGSGKNRCNLVDLMVEMDRILRP 540
Query: 474 EGTVVVRDSPEVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKSLWKLPS 527
EGTVV+RDSPEVIDK+ RIA VRWTA +H+KEP S+GREKILVATK+ WKLPS
Sbjct: 541 EGTVVIRDSPEVIDKIGRIAQAVRWTATIHEKEPESHGREKILVATKNFWKLPS 594
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449432183|ref|XP_004133879.1| PREDICTED: probable methyltransferase PMT13-like [Cucumis sativus] gi|449480142|ref|XP_004155811.1| PREDICTED: probable methyltransferase PMT13-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/384 (83%), Positives = 351/384 (91%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VASFGG ML+E+ILT+SFAPRDSHKAQIQFALERG+PAFVAMLGTR+LPFPAFSFD+VHC
Sbjct: 210 VASFGGYMLAEDILTVSFAPRDSHKAQIQFALERGVPAFVAMLGTRKLPFPAFSFDLVHC 269
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIA 262
SRCLIPFTAYNATY IEVDRLLRPGG+LVISGPPVQWPKQDKEWADLQ+VARALCYELIA
Sbjct: 270 SRCLIPFTAYNATYFIEVDRLLRPGGFLVISGPPVQWPKQDKEWADLQSVARALCYELIA 329
Query: 263 VDGNTVIWKKPVGESCLSNQNEFGLELCDESDDPNYAWYFKLKKCVSGTSSVKGEYAVGT 322
VDGNTVIWKKPVG+SCL NQNEFGLELC+ESDDPN AWY KL +CVS TSS K E+AVGT
Sbjct: 330 VDGNTVIWKKPVGDSCLPNQNEFGLELCNESDDPNRAWYVKLNRCVSRTSSAKDEFAVGT 389
Query: 323 IPKWPQRLTKAPSRALVMKNGYDVFEADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNA 382
IPKWP RL KAP RA V+KNG DVF ADSRRW RRVAYYK +L +KLGTPA+RN+MDMNA
Sbjct: 390 IPKWPDRLAKAPPRAGVVKNGLDVFNADSRRWERRVAYYKKSLKLKLGTPAVRNVMDMNA 449
Query: 383 FFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVS 442
FFGGFAAA+ SDPVWVMNVVP+ K STL+ IYDRGLIGVYHDWCEPFSTYPR+YD IHVS
Sbjct: 450 FFGGFAAAIKSDPVWVMNVVPSHKPSTLAAIYDRGLIGVYHDWCEPFSTYPRSYDFIHVS 509
Query: 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAV 502
GIESL+ PGS+K+ C+LVDLMVEMDR LRPEGTVV+RD+PE I++VSRIA +RWTA V
Sbjct: 510 GIESLVNYPGSDKSRCNLVDLMVEMDRFLRPEGTVVIRDNPEAIERVSRIARAIRWTATV 569
Query: 503 HDKEPGSNGREKILVATKSLWKLP 526
H+KEPGS GREKILVATK+ WKLP
Sbjct: 570 HEKEPGSQGREKILVATKNFWKLP 593
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224130116|ref|XP_002320756.1| predicted protein [Populus trichocarpa] gi|222861529|gb|EEE99071.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/383 (83%), Positives = 353/383 (92%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VAS+GG +L E ILTLSFAPRDSHKAQIQFALERG+PAFVAMLGTRRLP+PAFSFD+VHC
Sbjct: 211 VASWGGYLLKEGILTLSFAPRDSHKAQIQFALERGVPAFVAMLGTRRLPYPAFSFDLVHC 270
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIA 262
SRCLIPFTAYNA+Y IEV+RLLRPGGYLVISGPPVQW KQDKEWADLQAVARALCYELIA
Sbjct: 271 SRCLIPFTAYNASYFIEVNRLLRPGGYLVISGPPVQWAKQDKEWADLQAVARALCYELIA 330
Query: 263 VDGNTVIWKKPVGESCLSNQNEFGLELCDESDDPNYAWYFKLKKCVSGTSSVKGEYAVGT 322
VDGNTVIWKKP G+ CL NQNE+GLELCDESDDPN AWYFKLKKCVS TS+VKG+ +GT
Sbjct: 331 VDGNTVIWKKPAGDLCLPNQNEYGLELCDESDDPNDAWYFKLKKCVSRTSAVKGDCTIGT 390
Query: 323 IPKWPQRLTKAPSRALVMKNGYDVFEADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNA 382
IPKWP RLTKAPSRA+ MKNG D+F+AD+RRW RRVAYYKN+LNVKLGTPAIRN+MDMNA
Sbjct: 391 IPKWPDRLTKAPSRAVHMKNGLDLFDADTRRWVRRVAYYKNSLNVKLGTPAIRNVMDMNA 450
Query: 383 FFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVS 442
FFG FAAAL DPVWVMNVVPARK STL VIYDRGLIGVYHDWCEPFSTYPR+YDLIHV+
Sbjct: 451 FFGSFAAALMPDPVWVMNVVPARKPSTLGVIYDRGLIGVYHDWCEPFSTYPRSYDLIHVA 510
Query: 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAV 502
GIESL+K PGS+KN C+LVDLMVEMDR+LRPEGTV++RDSPEVIDKV+R+A VRW +
Sbjct: 511 GIESLLKLPGSSKNRCNLVDLMVEMDRILRPEGTVIIRDSPEVIDKVARVALAVRWLVTI 570
Query: 503 HDKEPGSNGREKILVATKSLWKL 525
H+KEP S+GREKILVATK+ WKL
Sbjct: 571 HEKEPESSGREKILVATKTFWKL 593
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255541472|ref|XP_002511800.1| conserved hypothetical protein [Ricinus communis] gi|223548980|gb|EEF50469.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/385 (82%), Positives = 356/385 (92%), Gaps = 2/385 (0%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VASFGG +L E ILTLSFAPRDSHK+QIQFALERGIPAFVAMLGTRRLPFPAFSFD+VHC
Sbjct: 122 VASFGGYLLKEGILTLSFAPRDSHKSQIQFALERGIPAFVAMLGTRRLPFPAFSFDLVHC 181
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIA 262
SRCLIPFTAYNATY +EVDRLLRPGGYLVISGPPVQW KQDKEWADLQ VARALCYELIA
Sbjct: 182 SRCLIPFTAYNATYFMEVDRLLRPGGYLVISGPPVQWAKQDKEWADLQGVARALCYELIA 241
Query: 263 VDGNTVIWKKPVGESCLSNQNEFGLELCDESDDPNYAWYFKLKKCVSGTSSVKGEYAVGT 322
VDGNTVIWKKPVG+SCL NQNEFGLELC+ES+DP+ AWYFKLKKC+S SV+GEYAVGT
Sbjct: 242 VDGNTVIWKKPVGDSCLPNQNEFGLELCEESEDPSQAWYFKLKKCLSRIPSVEGEYAVGT 301
Query: 323 IPKWPQRLTKAPSRALVMKNGYDVFEADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNA 382
IPKWP RLT+APSRA+ MKNG D+FEAD+RRW RRV YY+N+LN+KLGT AIRN+MDMNA
Sbjct: 302 IPKWPDRLTEAPSRAMRMKNGIDLFEADTRRWARRVTYYRNSLNLKLGTQAIRNVMDMNA 361
Query: 383 FFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVS 442
FFGGFA+AL+SDP WVMNVVPA K STL VI+DRGLIGVYHDWCEPFSTYPRTYDLIHV+
Sbjct: 362 FFGGFASALSSDPAWVMNVVPAGKLSTLDVIFDRGLIGVYHDWCEPFSTYPRTYDLIHVA 421
Query: 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAV 502
GIESLIK GS+KN C+LVDLMVEMDR+LRPEGTV++RD+PEVID+V+ +A+ V+WTA +
Sbjct: 422 GIESLIK--GSSKNRCNLVDLMVEMDRILRPEGTVLIRDTPEVIDRVAHVAHAVKWTATI 479
Query: 503 HDKEPGSNGREKILVATKSLWKLPS 527
H+KEP S+GREKI+VATKS WKLPS
Sbjct: 480 HEKEPESHGREKIMVATKSFWKLPS 504
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520463|ref|XP_003528881.1| PREDICTED: probable methyltransferase PMT13-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/382 (79%), Positives = 348/382 (91%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VASFGG +L++NILT+SFAPRDSHK+QIQFALERG+PAFVAMLGTRRLPFPAF FD+VHC
Sbjct: 212 VASFGGYLLAQNILTMSFAPRDSHKSQIQFALERGVPAFVAMLGTRRLPFPAFGFDLVHC 271
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIA 262
SRCLIPFTAYNA+Y IEVDRLLRPGGYLVISGPPVQWPKQDKEW+DLQAVARALCYELIA
Sbjct: 272 SRCLIPFTAYNASYFIEVDRLLRPGGYLVISGPPVQWPKQDKEWSDLQAVARALCYELIA 331
Query: 263 VDGNTVIWKKPVGESCLSNQNEFGLELCDESDDPNYAWYFKLKKCVSGTSSVKGEYAVGT 322
VDGNTVIWKKP E CL NQNEFGL+LCD+SDDP++AWYFKLKKC++ SSVKGEYA+GT
Sbjct: 332 VDGNTVIWKKPAVEMCLPNQNEFGLDLCDDSDDPSFAWYFKLKKCITRMSSVKGEYAIGT 391
Query: 323 IPKWPQRLTKAPSRALVMKNGYDVFEADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNA 382
IPKWP+RLT +P R+ V+KNG DV+EAD++RW RRVA+YKN+L +KLGTPA+RN+MDMNA
Sbjct: 392 IPKWPERLTASPPRSTVLKNGADVYEADTKRWVRRVAHYKNSLKIKLGTPAVRNVMDMNA 451
Query: 383 FFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVS 442
FFGGFAAAL SDPVWVMNVVP+ K TL I+DRGLIGVYHDWCEPFSTYPRTYDLIH +
Sbjct: 452 FFGGFAAALNSDPVWVMNVVPSHKPITLDAIFDRGLIGVYHDWCEPFSTYPRTYDLIHAT 511
Query: 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAV 502
IESLIK+P S +N CSL+DLMVE+DR+LRPEGTVVVRD+PEVI+KV+R+ VRW +
Sbjct: 512 SIESLIKDPASGRNRCSLLDLMVELDRILRPEGTVVVRDTPEVIEKVARVVRAVRWKPTI 571
Query: 503 HDKEPGSNGREKILVATKSLWK 524
++KEP S+GREKILVATK+ WK
Sbjct: 572 YNKEPESHGREKILVATKTFWK 593
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356505029|ref|XP_003521295.1| PREDICTED: probable methyltransferase PMT13-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/382 (78%), Positives = 349/382 (91%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VASFGG +L++NILT+SFAPRDSHK+QIQFALERG+PAFVAMLGTRRLPFPAF FD+VHC
Sbjct: 215 VASFGGYLLAQNILTMSFAPRDSHKSQIQFALERGVPAFVAMLGTRRLPFPAFGFDLVHC 274
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIA 262
SRCLIPFTAYN +Y IEVDRLLRPGGYLVISGPPVQWPKQDKEW+DLQAVARALCYELIA
Sbjct: 275 SRCLIPFTAYNVSYFIEVDRLLRPGGYLVISGPPVQWPKQDKEWSDLQAVARALCYELIA 334
Query: 263 VDGNTVIWKKPVGESCLSNQNEFGLELCDESDDPNYAWYFKLKKCVSGTSSVKGEYAVGT 322
VDGNTVIWKKP E CL NQNEFGL+LCD+SDDP++AWYFKLKKCV+ SSVKGEYA+GT
Sbjct: 335 VDGNTVIWKKPAAEMCLPNQNEFGLDLCDDSDDPSFAWYFKLKKCVTRMSSVKGEYAIGT 394
Query: 323 IPKWPQRLTKAPSRALVMKNGYDVFEADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNA 382
IPKWP+RLT +P R+ V+KNG DV+EAD++RW RRVA+YKN+L +KLGT A+RN+MDMNA
Sbjct: 395 IPKWPERLTASPLRSTVLKNGADVYEADTKRWVRRVAHYKNSLKIKLGTSAVRNVMDMNA 454
Query: 383 FFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVS 442
FFGGFAAAL SDPVWVMNVVP+ K TL I+DRGLIGVYHDWCEPFSTYPRTYDLIHV+
Sbjct: 455 FFGGFAAALNSDPVWVMNVVPSHKPITLDAIFDRGLIGVYHDWCEPFSTYPRTYDLIHVA 514
Query: 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAV 502
+ESL+K+P S +N C+L+DLMVE+DR+LRPEGTVVVRD+PEVI+KV+R+A+ VRW +
Sbjct: 515 SMESLVKDPASGRNRCTLLDLMVELDRILRPEGTVVVRDTPEVIEKVARVAHAVRWKPTI 574
Query: 503 HDKEPGSNGREKILVATKSLWK 524
++KEP S+GREKILVATK+ WK
Sbjct: 575 YNKEPESHGREKILVATKTFWK 596
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356568320|ref|XP_003552360.1| PREDICTED: probable methyltransferase PMT13-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/383 (81%), Positives = 350/383 (91%), Gaps = 1/383 (0%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VASFGG MLS+NILT+SFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAF FD+VHC
Sbjct: 215 VASFGGYMLSKNILTMSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFGFDLVHC 274
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIA 262
SRCLIPFTAYNA+Y IEVDRLLRPGGYLVISGPPVQWPKQDKEW+DLQAVARALCYELIA
Sbjct: 275 SRCLIPFTAYNASYFIEVDRLLRPGGYLVISGPPVQWPKQDKEWSDLQAVARALCYELIA 334
Query: 263 VDGNTVIWKKPVGESCLSNQNEFGLELCDESDDPNYAWYFKLKKCVSGTSSVKGEYAVGT 322
VDGNTVIWKKPVGESCL N+NEFGLELCD+SD P+ AWYFKLKKCVS TS VKG+YA+G
Sbjct: 335 VDGNTVIWKKPVGESCLPNENEFGLELCDDSDYPSQAWYFKLKKCVSRTS-VKGDYAIGI 393
Query: 323 IPKWPQRLTKAPSRALVMKNGYDVFEADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNA 382
IPKWP+RLT P R+ ++KNG DV+EAD++RW RRVA+YKN+L +KLGT +RN+MDMNA
Sbjct: 394 IPKWPERLTAIPPRSTLLKNGVDVYEADTKRWARRVAHYKNSLKIKLGTRFVRNVMDMNA 453
Query: 383 FFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVS 442
FGGFAAAL SDPVWV+NVVPA K TL VI+DRGLIGVYHDWCEPFSTYPR+YDLIHV+
Sbjct: 454 LFGGFAAALKSDPVWVINVVPALKPPTLDVIFDRGLIGVYHDWCEPFSTYPRSYDLIHVA 513
Query: 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAV 502
IESLIK+P S +N C+LVDLMVE+DRMLRPEGTVVVRD+PEVID+V+RIA+ VRW V
Sbjct: 514 SIESLIKDPASGQNRCTLVDLMVEIDRMLRPEGTVVVRDAPEVIDRVARIASAVRWKPTV 573
Query: 503 HDKEPGSNGREKILVATKSLWKL 525
+DKEP S+GREKILVATK+LWKL
Sbjct: 574 YDKEPESHGREKILVATKTLWKL 596
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356532064|ref|XP_003534594.1| PREDICTED: probable methyltransferase PMT13-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/383 (79%), Positives = 346/383 (90%), Gaps = 1/383 (0%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VASFGG MLS+NILT+SFAPRDSHKAQIQFALERG+PAFVAMLGTRR PFPAF FD+VHC
Sbjct: 216 VASFGGYMLSKNILTMSFAPRDSHKAQIQFALERGVPAFVAMLGTRRQPFPAFGFDLVHC 275
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIA 262
SRCLIPFTAYNA+Y IEVDRLLRPGGY VISGPPVQWPKQDKEW+DLQAVARALCYELIA
Sbjct: 276 SRCLIPFTAYNASYFIEVDRLLRPGGYFVISGPPVQWPKQDKEWSDLQAVARALCYELIA 335
Query: 263 VDGNTVIWKKPVGESCLSNQNEFGLELCDESDDPNYAWYFKLKKCVSGTSSVKGEYAVGT 322
VDGNTVIWKKP GESCL N+NEFGLELCD+SDDP+ AWYFKLKKCVS T VKG+YA+G
Sbjct: 336 VDGNTVIWKKPAGESCLPNENEFGLELCDDSDDPSQAWYFKLKKCVSRTY-VKGDYAIGI 394
Query: 323 IPKWPQRLTKAPSRALVMKNGYDVFEADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNA 382
IPKWP+RLT P R+ ++KNG DV+EAD++RW RRVA+YKN+L +KLGT ++RN+MDMNA
Sbjct: 395 IPKWPERLTATPPRSTLLKNGVDVYEADTKRWVRRVAHYKNSLKIKLGTQSVRNVMDMNA 454
Query: 383 FFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVS 442
FGGFAAAL SDPVWVMNVVPA+K TL VI+DRGLIGVYHDWCEPFSTYPR+YDLIHV
Sbjct: 455 LFGGFAAALKSDPVWVMNVVPAQKPPTLDVIFDRGLIGVYHDWCEPFSTYPRSYDLIHVV 514
Query: 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAV 502
+ESLIK+P S +N C+LVDLMVE+DR+LRPEGT+VVRD+PEVID+V+ IA VRW V
Sbjct: 515 SVESLIKDPASGQNRCTLVDLMVEIDRILRPEGTMVVRDAPEVIDRVAHIAGAVRWKPTV 574
Query: 503 HDKEPGSNGREKILVATKSLWKL 525
+DKEP S+GREKILVATK+LWKL
Sbjct: 575 YDKEPESHGREKILVATKTLWKL 597
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 527 | ||||||
| TAIR|locus:2117733 | 600 | QUA3 "QUASIMODO 3" [Arabidopsi | 0.730 | 0.641 | 0.820 | 3.8e-238 | |
| TAIR|locus:2196651 | 639 | AT1G33170 [Arabidopsis thalian | 0.717 | 0.591 | 0.457 | 8e-110 | |
| TAIR|locus:2127711 | 633 | AT4G10440 [Arabidopsis thalian | 0.707 | 0.589 | 0.45 | 2.4e-108 | |
| TAIR|locus:2117728 | 633 | AT4G00750 [Arabidopsis thalian | 0.711 | 0.592 | 0.462 | 3.9e-108 | |
| TAIR|locus:2202805 | 616 | AT1G26850 [Arabidopsis thalian | 0.707 | 0.605 | 0.468 | 3.5e-107 | |
| TAIR|locus:2141035 | 621 | AT4G18030 [Arabidopsis thalian | 0.698 | 0.592 | 0.475 | 9.2e-107 | |
| TAIR|locus:2134756 | 600 | ERD3 "early-responsive to dehy | 0.707 | 0.621 | 0.444 | 4e-104 | |
| TAIR|locus:2034522 | 603 | AT1G31850 [Arabidopsis thalian | 0.705 | 0.616 | 0.443 | 7.4e-103 | |
| TAIR|locus:2041031 | 611 | AT2G43200 [Arabidopsis thalian | 0.703 | 0.607 | 0.444 | 2e-98 | |
| TAIR|locus:2129660 | 608 | AT4G14360 [Arabidopsis thalian | 0.707 | 0.613 | 0.429 | 2.6e-94 |
| TAIR|locus:2117733 QUA3 "QUASIMODO 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1739 (617.2 bits), Expect = 3.8e-238, Sum P(2) = 3.8e-238
Identities = 316/385 (82%), Positives = 357/385 (92%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VASFGG++LS+ IL LSFAPRDSHK+QIQFALERG+PAFVAMLGTRRLPFPA+SFD++HC
Sbjct: 213 VASFGGTLLSQGILALSFAPRDSHKSQIQFALERGVPAFVAMLGTRRLPFPAYSFDLMHC 272
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIA 262
SRCLIPFTAYNATY IEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIA
Sbjct: 273 SRCLIPFTAYNATYFIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIA 332
Query: 263 VDGNTVIWKKPVGESCLSNQNEFGLELCDESDDPNYAWYFKLKKCVSGTSSVKGEYAVGT 322
VDGNTVIWKKPVG+SCL +QNEFGLELCDES P+ AWYFKLK+CV+ SSVKGE+A+GT
Sbjct: 333 VDGNTVIWKKPVGDSCLPSQNEFGLELCDESVPPSDAWYFKLKRCVTRPSSVKGEHALGT 392
Query: 323 IPKWPQRLTKAPSRALVMKNGYDVFEADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNA 382
I KWP+RLTK PSRA+VMKNG DVFEAD+RRW RRVAYY+++LN+KL +P +RN+MDMNA
Sbjct: 393 ISKWPERLTKVPSRAIVMKNGLDVFEADARRWARRVAYYRDSLNLKLKSPTVRNVMDMNA 452
Query: 383 FFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVS 442
FFGGFAA L SDPVWVMNV+PARK TL VIYDRGLIGVYHDWCEPFSTYPRTYD IHVS
Sbjct: 453 FFGGFAATLASDPVWVMNVIPARKPLTLDVIYDRGLIGVYHDWCEPFSTYPRTYDFIHVS 512
Query: 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAV 502
GIESLIK S+K+ CSLVDLMVEMDR+LRPEG VV+RDSPEV+DKV+R+A+ VRW++++
Sbjct: 513 GIESLIKRQDSSKSRCSLVDLMVEMDRILRPEGKVVIRDSPEVLDKVARMAHAVRWSSSI 572
Query: 503 HDKEPGSNGREKILVATKSLWKLPS 527
H+KEP S+GREKIL+ATKSLWKLPS
Sbjct: 573 HEKEPESHGREKILIATKSLWKLPS 597
|
|
| TAIR|locus:2196651 AT1G33170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 927 (331.4 bits), Expect = 8.0e-110, Sum P(2) = 8.0e-110
Identities = 185/404 (45%), Positives = 252/404 (62%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VASFG +L +I+ +SFAPRD+H+AQ+QFALERG+PA + ++G+RRLP+PA +FD+ HC
Sbjct: 242 VASFGAYLLKRDIVAMSFAPRDTHEAQVQFALERGVPAIIGIMGSRRLPYPARAFDLAHC 301
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWA----DLQA------- 251
SRCLIP+ + YL EVDR+LRPGGY ++SGPP+ W K K W DL+
Sbjct: 302 SRCLIPWFQNDGLYLTEVDRVLRPGGYWILSGPPINWKKYWKGWERSQEDLKQEQDSIED 361
Query: 252 VARALCYELIAVDGNTVIWKKPVGE-SCLSNQNEFGLE-LCDESDDPNYAWYFKLKKCVS 309
AR+LC++ + G+ IW+KP+ C + LC +SD P++AWY L+ CV+
Sbjct: 362 AARSLCWKKVTEKGDLSIWQKPINHVECNKLKRVHKTPPLCSKSDLPDFAWYKDLESCVT 421
Query: 310 GTSSVKG--EYAVGTIPKWPQRLTKAPSRAL---VMKNGYDVFEADSRRWRRRVAYYKNT 364
E+A G + WP R P R + + + F D+ W+ R++YYK
Sbjct: 422 PLPEANSSDEFAGGALEDWPNRAFAVPPRIIGGTIPDINAEKFREDNEVWKERISYYKQI 481
Query: 365 LNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPA-RKSSTLSVIYDRGLIGVYH 423
+ +L RNIMDMNA+ GGFAAA+ P WVMNVVP + TL VI++RG IG Y
Sbjct: 482 MP-ELSRGRFRNIMDMNAYLGGFAAAMMKYPSWVMNVVPVDAEKQTLGVIFERGFIGTYQ 540
Query: 424 DWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP 483
DWCE FSTYPRTYDLIH G+ S+ +N C + +++EMDR+LRPEGTVV RD+
Sbjct: 541 DWCEGFSTYPRTYDLIHAGGLFSIYEN------RCDVTLILLEMDRILRPEGTVVFRDTV 594
Query: 484 EVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKSLWKLPS 527
E++ K+ I N +RW + + D E G EKIL+A KS W PS
Sbjct: 595 EMLTKIQSITNGMRWKSRILDHERGPFNPEKILLAVKSYWTGPS 638
|
|
| TAIR|locus:2127711 AT4G10440 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 904 (323.3 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
Identities = 180/400 (45%), Positives = 254/400 (63%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VASFG +L +I+ +SFAPRD+H+AQ+QFALERG+PA + ++G+RRLP+PA +FD+ HC
Sbjct: 225 VASFGAYLLKRDIMAVSFAPRDTHEAQVQFALERGVPAIIGIMGSRRLPYPARAFDLAHC 284
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPK---------QD--KEWADLQA 251
SRCLIP+ + YL+EVDR+LRPGGY ++SGPP+ W + +D KE ++
Sbjct: 285 SRCLIPWFKNDGLYLMEVDRVLRPGGYWILSGPPINWKQYWRGWERTEEDLKKEQDSIED 344
Query: 252 VARALCYELIAVDGNTVIWKKPVGE-SCLS-NQNEFGLELCDESDDPNYAWYFKLKKCVS 309
VA++LC++ + G+ IW+KP+ C QN +C SD+ + AWY L+ C++
Sbjct: 345 VAKSLCWKKVTEKGDLSIWQKPLNHIECKKLKQNNKSPPICS-SDNADSAWYKDLETCIT 403
Query: 310 GTSSVKG--EYAVGTIPKWPQRLTKAPSRAL---VMKNGYDVFEADSRRWRRRVAYYKNT 364
+ A G + WP R P R + + + + F D+ W+ R+A+YK
Sbjct: 404 PLPETNNPDDSAGGALEDWPDRAFAVPPRIIRGTIPEMNAEKFREDNEVWKERIAHYKKI 463
Query: 365 LNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPA-RKSSTLSVIYDRGLIGVYH 423
+ +L RNIMDMNAF GGFAA++ P WVMNVVP + TL VIY+RGLIG Y
Sbjct: 464 VP-ELSHGRFRNIMDMNAFLGGFAASMLKYPSWVMNVVPVDAEKQTLGVIYERGLIGTYQ 522
Query: 424 DWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP 483
DWCE FSTYPRTYD+IH G+ SL ++ C L +++EMDR+LRPEGTVV+RD+
Sbjct: 523 DWCEGFSTYPRTYDMIHAGGLFSLYEH------RCDLTLILLEMDRILRPEGTVVLRDNV 576
Query: 484 EVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKSLW 523
E ++KV +I ++W + + D E G EKILVA K+ W
Sbjct: 577 ETLNKVEKIVKGMKWKSQIVDHEKGPFNPEKILVAVKTYW 616
|
|
| TAIR|locus:2117728 AT4G00750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 942 (336.7 bits), Expect = 3.9e-108, Sum P(2) = 3.9e-108
Identities = 189/409 (46%), Positives = 256/409 (62%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VASFG ++S NI+T+SFAPRD+H+AQ+QFALERG+PA + +L + RLPFPA +FDI HC
Sbjct: 228 VASFGAYLMSRNIVTMSFAPRDTHEAQVQFALERGVPAIIGVLASIRLPFPARAFDIAHC 287
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEW-----------ADLQA 251
SRCLIP+ YN TYLIEVDR+LRPGGY ++SGPP+ W + K W + ++
Sbjct: 288 SRCLIPWGQYNGTYLIEVDRVLRPGGYWILSGPPINWQRHWKGWERTRDDLNSEQSQIER 347
Query: 252 VARALCYELIAVDGNTVIWKKPVGE-SCLSNQNEFGLE-LCDESDDPNYAWYFKLKKCVS 309
VAR+LC+ + + +W+KP C N+ G C + PN WY KL+ C++
Sbjct: 348 VARSLCWRKLVQREDLAVWQKPTNHVHCKRNRIALGRPPFCHRTL-PNQGWYTKLETCLT 406
Query: 310 GTSSVKG----EYAVGTIPKWPQRLTKAPSRALVMKNGY------DVFEADSRRWRRRVA 359
V G E A G + +WP+RL P R +K+G D F +++ +W+RRV+
Sbjct: 407 PLPEVTGSEIKEVAGGQLARWPERLNALPPR---IKSGSLEGITEDEFVSNTEKWQRRVS 463
Query: 360 YYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGL 418
YYK T RN +DMNA GGFA+AL DPVWVMNVVP S +TL VIY+RGL
Sbjct: 464 YYKKYDQQLAETGRYRNFLDMNAHLGGFASALVDDPVWVMNVVPVEASVNTLGVIYERGL 523
Query: 419 IGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVV 478
IG Y +WCE STYPRTYD IH + SL K+ C + D+++EMDR+LRP+G+V+
Sbjct: 524 IGTYQNWCEAMSTYPRTYDFIHADSVFSLYKD------RCDMEDILLEMDRILRPKGSVI 577
Query: 479 VRDSPEVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKSLWKLPS 527
+RD +V+ KV +I + ++W + D E G REKIL K W P+
Sbjct: 578 IRDDIDVLTKVKKITDAMQWEGRIGDHENGPLEREKILFLVKEYWTAPA 626
|
|
| TAIR|locus:2202805 AT1G26850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 920 (328.9 bits), Expect = 3.5e-107, Sum P(2) = 3.5e-107
Identities = 187/399 (46%), Positives = 255/399 (63%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VAS+G + S N+ +SFAPRDSH+AQ+QFALERG+PA + +LGT +LP+P +FD+ HC
Sbjct: 218 VASWGAYLWSRNVRAMSFAPRDSHEAQVQFALERGVPAVIGVLGTIKLPYPTRAFDMAHC 277
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQW---------PKQD--KEWADLQA 251
SRCLIP+ A + YL+EVDR+LRPGGY ++SGPP+ W PK+D +E ++
Sbjct: 278 SRCLIPWGANDGMYLMEVDRVLRPGGYWILSGPPINWKVNYKAWQRPKEDLQEEQRKIEE 337
Query: 252 VARALCYELIAVDGNTVIWKKPVG-ESCLSNQNEFGLELCDESDDPNYAWYFKLKKCVSG 310
A+ LC+E G IW+K V E+C S Q++ C ++DD + WY K++ C++
Sbjct: 338 AAKLLCWEKKYEHGEIAIWQKRVNDEACRSRQDDPRANFC-KTDDTDDVWYKKMEACITP 396
Query: 311 --TSSVKGEYAVGTIPKWPQRLTKAPSR---ALVMKNGYDVFEADSRRWRRRVAYYKNTL 365
+S E A G + +P RL P R + D +E D+R+W++ V YK +
Sbjct: 397 YPETSSSDEVAGGELQAFPDRLNAVPPRISSGSISGVTVDAYEDDNRQWKKHVKAYKR-I 455
Query: 366 NVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPA-RKSSTLSVIYDRGLIGVYHD 424
N L T RNIMDMNA FGGFAAAL S +WVMNVVP + + L V+Y+RGLIG+YHD
Sbjct: 456 NSLLDTGRYRNIMDMNAGFGGFAAALESQKLWVMNVVPTIAEKNRLGVVYERGLIGIYHD 515
Query: 425 WCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPE 484
WCE FSTYPRTYDLIH + + SL KN C+ D+++EMDR+LRPEG V++RD +
Sbjct: 516 WCEAFSTYPRTYDLIHANHLFSLYKN------KCNADDILLEMDRILRPEGAVIIRDDVD 569
Query: 485 VIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKSLW 523
+ KV RI +RW A + D E G EK+L+A K W
Sbjct: 570 TLIKVKRIIAGMRWDAKLVDHEDGPLVPEKVLIAVKQYW 608
|
|
| TAIR|locus:2141035 AT4G18030 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 915 (327.2 bits), Expect = 9.2e-107, Sum P(2) = 9.2e-107
Identities = 190/400 (47%), Positives = 257/400 (64%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VAS+G ML N+LT+SFAPRD+H+AQ+QFALERG+PA +A+LG+ LP+PA +FD+ C
Sbjct: 217 VASWGAYMLKRNVLTMSFAPRDNHEAQVQFALERGVPAIIAVLGSILLPYPARAFDMAQC 276
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEW----ADLQA------- 251
SRCLIP+TA TYL+EVDR+LRPGGY V+SGPP+ W K W A+L A
Sbjct: 277 SRCLIPWTANEGTYLMEVDRVLRPGGYWVLSGPPINWKTWHKTWNRTKAELNAEQKRIEG 336
Query: 252 VARALCYELIAVDGNTVIWKKPVGE-SCLSNQNEFGLELCDESDDPNYAWYFKLKKCVSG 310
+A +LC+E G+ I++K + + SC ++ C D + WY +++ CV+
Sbjct: 337 IAESLCWEKKYEKGDIAIFRKKINDRSC---DRSTPVDTCKRKDTDD-VWYKEIETCVTP 392
Query: 311 TSSVKGEYAV--GTIPKWPQRLTKAP---SRALVMKNGYDV--FEADSRRWRRRVAYYKN 363
V E V G + K+P+RL P S+ L+ NG D ++ D W++RV YK
Sbjct: 393 FPKVSNEEEVAGGKLKKFPERLFAVPPSISKGLI--NGVDEESYQEDINLWKKRVTGYKR 450
Query: 364 TLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIGVYH 423
+N +G+ RN+MDMNA GGFAAAL S WVMNV+P +TLSV+Y+RGLIG+YH
Sbjct: 451 -INRLIGSTRYRNVMDMNAGLGGFAAALESPKSWVMNVIPTINKNTLSVVYERGLIGIYH 509
Query: 424 DWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP 483
DWCE FSTYPRTYD IH SG+ SL ++ SC L D+++E DR+LRPEG V+ RD
Sbjct: 510 DWCEGFSTYPRTYDFIHASGVFSLYQH------SCKLEDILLETDRILRPEGIVIFRDEV 563
Query: 484 EVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKSLW 523
+V++ V +I + +RW + D E G EKILVATK W
Sbjct: 564 DVLNDVRKIVDGMRWDTKLMDHEDGPLVPEKILVATKQYW 603
|
|
| TAIR|locus:2134756 ERD3 "early-responsive to dehydration 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 902 (322.6 bits), Expect = 4.0e-104, Sum P(2) = 4.0e-104
Identities = 176/396 (44%), Positives = 248/396 (62%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VAS+GG +L ILT+S APRD+H+AQ+QFALERGIPA + ++ T+RLPFP+ SFD+ HC
Sbjct: 203 VASWGGDLLDRGILTVSLAPRDNHEAQVQFALERGIPAILGIISTQRLPFPSNSFDMAHC 262
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEW-----------ADLQA 251
SRCLIP+T + YL+EV R+LRPGG+ V+SGPPV + + K W LQ
Sbjct: 263 SRCLIPWTEFGGVYLLEVHRILRPGGFWVLSGPPVNYENRWKGWDTTIEEQRSNYEKLQE 322
Query: 252 VARALCYELIAVDGNTVIWKKPVGESC---LSNQNEFGLELCDESDDPNYAWYFKLKKCV 308
+ ++C+++ A + +W+K C LSN + CD+S +P+ AWY L+ CV
Sbjct: 323 LLSSMCFKMYAKKDDIAVWQKSPDNLCYNKLSNDPDAYPPKCDDSLEPDSAWYTPLRPCV 382
Query: 309 SGTSSVKGEYAVGTIPKWPQRLTKAPSRALVMKNGY-DVFEADSRRWRRRVAYYKNTLNV 367
S + + + PKWP+RL P R + G +VF+ D +W+ R +YK L
Sbjct: 383 VVPSPKLKKTDLESTPKWPERLHTTPERISDVPGGNGNVFKHDDSKWKTRAKHYKKLLPA 442
Query: 368 KLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCE 427
+G+ IRN+MDMN +GG AAAL +DP+WVMNVV + ++TL V++DRGLIG YHDWCE
Sbjct: 443 -IGSDKIRNVMDMNTAYGGLAAALVNDPLWVMNVVSSYAANTLPVVFDRGLIGTYHDWCE 501
Query: 428 PFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVID 487
FSTYPRTYDL+HV G+ + S C + +M+EMDR+LRP G ++R+S D
Sbjct: 502 AFSTYPRTYDLLHVDGLFT------SESQRCDMKYVMLEMDRILRPSGYAIIRESSYFAD 555
Query: 488 KVSRIANTVRWTAAVHDKEPGSNGREKILVATKSLW 523
++ +A +RW+ E S EK+L+ K LW
Sbjct: 556 SIASVAKELRWSCRKEQTESAS-ANEKLLICQKKLW 590
|
|
| TAIR|locus:2034522 AT1G31850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 899 (321.5 bits), Expect = 7.4e-103, Sum P(2) = 7.4e-103
Identities = 176/397 (44%), Positives = 259/397 (65%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VAS+GG +L IL+LS APRD+H+AQ+QFALERGIPA + ++ T+RLPFP+ +FD+ HC
Sbjct: 209 VASWGGDLLDRGILSLSLAPRDNHEAQVQFALERGIPAILGIISTQRLPFPSNAFDMAHC 268
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEW--------AD---LQA 251
SRCLIP+T + YL+E+ R++RPGG+ V+SGPPV + ++ + W +D LQ+
Sbjct: 269 SRCLIPWTEFGGIYLLEIHRIVRPGGFWVLSGPPVNYNRRWRGWNTTMEDQKSDYNKLQS 328
Query: 252 VARALCYELIAVDGNTVIWKKPVGESC---LSNQNEFGLELCDESDDPNYAWYFKLKKCV 308
+ ++C++ A + +W+K +SC ++ E CD+S +P+ AWY L+ CV
Sbjct: 329 LLTSMCFKKYAQKDDIAVWQKLSDKSCYDKIAKNMEAYPPKCDDSIEPDSAWYTPLRPCV 388
Query: 309 -SGTSSVKGEYAVGTIPKWPQRLTKAPSRALVMKNGY-DVFEADSRRWRRRVAYYKNTLN 366
+ T VK + +G+IPKWP+RL AP R + G + + D +W+ RV +YK L
Sbjct: 389 VAPTPKVK-KSGLGSIPKWPERLHVAPERIGDVHGGSANSLKHDDGKWKNRVKHYKKVLP 447
Query: 367 VKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIGVYHDWC 426
LGT IRN+MDMN +GGF+AAL DP+WVMNVV + +++L V++DRGLIG YHDWC
Sbjct: 448 A-LGTDKIRNVMDMNTVYGGFSAALIEDPIWVMNVVSSYSANSLPVVFDRGLIGTYHDWC 506
Query: 427 EPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVI 486
E FSTYPRTYDL+H+ + +L + C + +++EMDR+LRP G V++R+S +
Sbjct: 507 EAFSTYPRTYDLLHLDSLFTL------ESHRCEMKYILLEMDRILRPSGYVIIRESSYFM 560
Query: 487 DKVSRIANTVRWTAAVHDKEPGSNGREKILVATKSLW 523
D ++ +A +RW+ + E EKILV K LW
Sbjct: 561 DAITTLAKGIRWSCRREETEYAVKS-EKILVCQKKLW 596
|
|
| TAIR|locus:2041031 AT2G43200 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 831 (297.6 bits), Expect = 2.0e-98, Sum P(2) = 2.0e-98
Identities = 176/396 (44%), Positives = 239/396 (60%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VASFG +L+ ILT+S APRD H+AQ+QFALERG+PA + +L T +LP+P+ SFD+VHC
Sbjct: 224 VASFGAFLLNYKILTMSIAPRDIHEAQVQFALERGLPAMLGVLSTYKLPYPSRSFDMVHC 283
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPV----QWPKQDKEWADLQA------- 251
SRCL+ +T+Y+ YL+EVDR+LRP GY V+SGPPV ++ Q ++ +LQ
Sbjct: 284 SRCLVNWTSYDGLYLMEVDRVLRPEGYWVLSGPPVASRVKFKNQKRDSKELQNQMEKLND 343
Query: 252 VARALCYELIAVDGNTVIWKKPVGE-SCLSNQNEFGLE-LCDESDDPNYAWYFKLKKCVS 309
V R LC+E IA VIW+KP C LC SD P+ AWY +++ C++
Sbjct: 344 VFRRLCWEKIAESYPVVIWRKPSNHLQCRKRLKALKFPGLCSSSD-PDAAWYKEMEPCIT 402
Query: 310 GTSSVKGEYAVGTIPKWPQRLTKAPSRALVMKNGYDV--FEADSRRWRRRVAYYKNTLNV 367
V + WP+RL P G + F+AD+ W+RRV YY
Sbjct: 403 PLPDVNDTNKT-VLKNWPERLNHVPRMKTGSIQGTTIAGFKADTNLWQRRVLYYDTKFKF 461
Query: 368 KLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPAR-KSSTLSVIYDRGLIGVYHDWC 426
L RN++DMNA GGFAAAL P+WVMNVVP K +TL V+YDRGLIG Y +WC
Sbjct: 462 -LSNGKYRNVIDMNAGLGGFAAALIKYPMWVMNVVPFDLKPNTLGVVYDRGLIGTYMNWC 520
Query: 427 EPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVI 486
E STYPRTYDLIH +G+ SL + C +VD+++EM R+LRPEG V++RD +V+
Sbjct: 521 EALSTYPRTYDLIHANGVFSLYLD------KCDIVDILLEMQRILRPEGAVIIRDRFDVL 574
Query: 487 DKVSRIANTVRWTAAVHDKEPGSNGREKILVATKSL 522
KV I N +RW ++ ++ IL+ S+
Sbjct: 575 VKVKAITNQMRWNGTMYPEDNSVFDHGTILIVDNSI 610
|
|
| TAIR|locus:2129660 AT4G14360 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 825 (295.5 bits), Expect = 2.6e-94, Sum P(2) = 2.6e-94
Identities = 167/389 (42%), Positives = 229/389 (58%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VASFGG +LS +ILT+S AP D H+ QIQFALERGIPA + +LGT+RLP+P+ SF++ HC
Sbjct: 218 VASFGGYLLSSDILTMSLAPNDVHQNQIQFALERGIPASLGVLGTKRLPYPSRSFELSHC 277
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKE----WADLQAVARALCY 258
SRC I + + L+E+DR+LRPGGY S P QD+E W ++ A+ +C+
Sbjct: 278 SRCRIDWLQRDGILLLELDRVLRPGGYFAYSSPEAY--AQDEEDLRIWREMSALVERMCW 335
Query: 259 ELIAVDGNTVIWKKPVGESCLSNQNEFGLE--LCDESDDPNYAWYFKLKKCVSGTSSVKG 316
++ A TVIW+KP+ C + E G + LC +DP+ W ++ C++ S
Sbjct: 336 KIAAKRNQTVIWQKPLTNDCYL-EREPGTQPPLCRSDNDPDAVWGVNMEACITSYSDHDH 394
Query: 317 EYAVGTIPKWPQRLTKAPSRALVMKNGYDVFEADSRRWRRRVAYYKNTLNVKLGTPAIRN 376
+ + WP RLT P R +FE D+ WR+RV Y + L+ ++ + +RN
Sbjct: 395 KTKGSGLAPWPARLTSPPPRLADFGYSTGMFEKDTELWRQRVDTYWDLLSPRIESDTVRN 454
Query: 377 IMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFSTYPRTY 436
IMDM A G FAAAL VWVMNVVP +TL +IYDRGL+G H WCE FSTYPRTY
Sbjct: 455 IMDMKASMGSFAAALKEKDVWVMNVVPEDGPNTLKLIYDRGLMGAVHSWCEAFSTYPRTY 514
Query: 437 DLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTV 496
DL+H I S IK G CS VDL++EMDR+LRP G +++RD V+D V + +
Sbjct: 515 DLLHAWDIISDIKKKG-----CSEVDLLLEMDRILRPSGFIIIRDKQRVVDFVKKYLKAL 569
Query: 497 RW--TAAVHDKEPGSNGREKILVATKSLW 523
W D + + + + K LW
Sbjct: 570 HWEEVGTKTDSDSDQDSDNVVFIVQKKLW 598
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q93W95 | PMTD_ARATH | 2, ., 1, ., 1, ., - | 0.6532 | 1.0 | 0.8783 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 527 | |||
| pfam03141 | 506 | pfam03141, Methyltransf_29, Putative S-adenosyl-L- | 0.0 | |
| pfam03141 | 506 | pfam03141, Methyltransf_29, Putative S-adenosyl-L- | 7e-21 | |
| pfam08241 | 92 | pfam08241, Methyltransf_11, Methyltransferase doma | 2e-06 | |
| COG2226 | 238 | COG2226, UbiE, Methylase involved in ubiquinone/me | 0.003 |
| >gnl|CDD|217386 pfam03141, Methyltransf_29, Putative S-adenosyl-L-methionine-dependent methyltransferase | Back alignment and domain information |
|---|
Score = 577 bits (1490), Expect = 0.0
Identities = 198/385 (51%), Positives = 265/385 (68%), Gaps = 13/385 (3%)
Query: 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHC 202
VASFG +LS ++LT+SFAP+D H+AQ+QFALERG+PA + +LGTRRLP+P+ SFD+ HC
Sbjct: 128 VASFGAYLLSRDVLTMSFAPKDVHEAQVQFALERGVPAMLGVLGTRRLPYPSRSFDMAHC 187
Query: 203 SRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQD---KEWADLQAVARALCYE 259
SRCLIP+ A + L+EVDR+LRPGGY V+SGPPV ++ +EW ++A+A++LC++
Sbjct: 188 SRCLIPWHANDGILLLEVDRVLRPGGYFVLSGPPVYARDEEDLQEEWKAMEALAKSLCWK 247
Query: 260 LIAVDGNTVIWKKPVGESC-LSNQNEFGLELCDESDDPNYAWYFKLKKCVSGTSSVKGEY 318
L+A G+ IW+KPV SC + LC +SDDP+ AWY ++ C++ V E
Sbjct: 248 LVAKKGDIAIWQKPVNNSCYNKREPGKKPPLCKDSDDPDAAWYVPMEACITPLPEVSHEV 307
Query: 319 AVGTIPKWPQRLTKAPSRA---LVMKNGYDVFEADSRRWRRRVAYYKNTLNVKLGTPAIR 375
G + KWP+RLT P R + + F+AD+ W+RRV+ YK L + + +R
Sbjct: 308 GGGWLEKWPERLTAVPPRLASGQIGGVSAEAFKADTELWKRRVSKYKRLLKLLIDKGRVR 367
Query: 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFSTYPRT 435
N+MDMNA FGGFAAAL DPVWVMNVVP TL VIYDRGLIG+YHDWCEPFSTYPRT
Sbjct: 368 NVMDMNAGFGGFAAALIDDPVWVMNVVPVDSPDTLPVIYDRGLIGIYHDWCEPFSTYPRT 427
Query: 436 YDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANT 495
YDL+H + SL K C+L D+++EMDR+LRP G V++RD +V+DKV +IA
Sbjct: 428 YDLLHADHLFSLY------KKRCNLEDILLEMDRILRPGGAVIIRDDVDVLDKVKKIAKA 481
Query: 496 VRWTAAVHDKEPGSNGREKILVATK 520
+RW + D E G + EKIL+A K
Sbjct: 482 MRWEVRITDTEDGPHDPEKILIAQK 506
|
This family is a putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase. Length = 506 |
| >gnl|CDD|217386 pfam03141, Methyltransf_29, Putative S-adenosyl-L-methionine-dependent methyltransferase | Back alignment and domain information |
|---|
Score = 95.5 bits (238), Expect = 7e-21
Identities = 30/58 (51%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 88 DHMPCEDPRRNSQ--LSREMNFYRERHCPLPDQTPLCLIPPPRGYKIPVPWPESLSKV 143
D++PC D R + LSRE +RERHCP ++ CL+PPP GYK P+PWP+S KV
Sbjct: 1 DYIPCLDNDRAIKFLLSRERMEHRERHCPPSEEKLRCLVPPPDGYKTPIPWPKSRDKV 58
|
This family is a putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase. Length = 506 |
| >gnl|CDD|219759 pfam08241, Methyltransf_11, Methyltransferase domain | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 2e-06
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 164 DSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRL 223
D + A +R FV LPFP SFD+V S ++ L E+ R+
Sbjct: 26 DLSPEMLALARKRAPRKFVVG-DAEDLPFPDESFDVVVSS-LVLHHLPDPERALREIARV 83
Query: 224 LRPGGYLVI 232
L+PGG LVI
Sbjct: 84 LKPGGKLVI 92
|
Members of this family are SAM dependent methyltransferases. Length = 92 |
| >gnl|CDD|225136 COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.003
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 189 RLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVI---SGPPVQWPKQ 242
LPFP SFD V S L T + L E+ R+L+PGG L++ S P ++
Sbjct: 112 NLPFPDNSFDAVTISFGLRNVTDIDK-ALKEMYRVLKPGGRLLVLEFSKPDNPVLRK 167
|
Length = 238 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 527 | |||
| PF03141 | 506 | Methyltransf_29: Putative S-adenosyl-L-methionine- | 100.0 | |
| PF03141 | 506 | Methyltransf_29: Putative S-adenosyl-L-methionine- | 100.0 | |
| COG2226 | 238 | UbiE Methylase involved in ubiquinone/menaquinone | 99.41 | |
| PF08241 | 95 | Methyltransf_11: Methyltransferase domain; InterPr | 99.35 | |
| PLN02336 | 475 | phosphoethanolamine N-methyltransferase | 99.35 | |
| PF01209 | 233 | Ubie_methyltran: ubiE/COQ5 methyltransferase famil | 99.23 | |
| PLN02232 | 160 | ubiquinone biosynthesis methyltransferase | 99.09 | |
| PLN02233 | 261 | ubiquinone biosynthesis methyltransferase | 99.0 | |
| KOG1540 | 296 | consensus Ubiquinone biosynthesis methyltransferas | 98.92 | |
| PRK10258 | 251 | biotin biosynthesis protein BioC; Provisional | 98.85 | |
| PLN02244 | 340 | tocopherol O-methyltransferase | 98.83 | |
| PRK05785 | 226 | hypothetical protein; Provisional | 98.74 | |
| PLN02396 | 322 | hexaprenyldihydroxybenzoate methyltransferase | 98.73 | |
| PRK14103 | 255 | trans-aconitate 2-methyltransferase; Provisional | 98.65 | |
| PTZ00098 | 263 | phosphoethanolamine N-methyltransferase; Provision | 98.6 | |
| KOG4300 | 252 | consensus Predicted methyltransferase [General fun | 98.57 | |
| PLN02336 | 475 | phosphoethanolamine N-methyltransferase | 98.52 | |
| PRK08317 | 241 | hypothetical protein; Provisional | 98.5 | |
| PRK11088 | 272 | rrmA 23S rRNA methyltransferase A; Provisional | 98.5 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 98.46 | |
| TIGR00740 | 239 | methyltransferase, putative. A simple BLAST search | 98.46 | |
| PRK11036 | 255 | putative S-adenosyl-L-methionine-dependent methylt | 98.46 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 98.45 | |
| PF13489 | 161 | Methyltransf_23: Methyltransferase domain; PDB: 3J | 98.44 | |
| PRK01683 | 258 | trans-aconitate 2-methyltransferase; Provisional | 98.42 | |
| TIGR02072 | 240 | BioC biotin biosynthesis protein BioC. This enzyme | 98.4 | |
| PLN02490 | 340 | MPBQ/MSBQ methyltransferase | 98.4 | |
| TIGR02752 | 231 | MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me | 98.4 | |
| PF13649 | 101 | Methyltransf_25: Methyltransferase domain; PDB: 3B | 98.33 | |
| smart00138 | 264 | MeTrc Methyltransferase, chemotaxis proteins. Meth | 98.32 | |
| PRK15068 | 322 | tRNA mo(5)U34 methyltransferase; Provisional | 98.3 | |
| TIGR00477 | 195 | tehB tellurite resistance protein TehB. Part of a | 98.29 | |
| PRK11207 | 197 | tellurite resistance protein TehB; Provisional | 98.27 | |
| PF08241 | 95 | Methyltransf_11: Methyltransferase domain; InterPr | 98.25 | |
| smart00828 | 224 | PKS_MT Methyltransferase in polyketide synthase (P | 98.16 | |
| TIGR00452 | 314 | methyltransferase, putative. Known examples to dat | 98.12 | |
| PRK15451 | 247 | tRNA cmo(5)U34 methyltransferase; Provisional | 98.11 | |
| PF12847 | 112 | Methyltransf_18: Methyltransferase domain; PDB: 3G | 98.1 | |
| PF08242 | 99 | Methyltransf_12: Methyltransferase domain; InterPr | 98.09 | |
| PRK06922 | 677 | hypothetical protein; Provisional | 98.09 | |
| TIGR01934 | 223 | MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis | 98.05 | |
| TIGR03587 | 204 | Pse_Me-ase pseudaminic acid biosynthesis-associate | 98.04 | |
| PF13847 | 152 | Methyltransf_31: Methyltransferase domain; PDB: 3T | 98.03 | |
| PRK12335 | 287 | tellurite resistance protein TehB; Provisional | 98.02 | |
| PRK00107 | 187 | gidB 16S rRNA methyltransferase GidB; Reviewed | 97.99 | |
| KOG3010 | 261 | consensus Methyltransferase [General function pred | 97.96 | |
| PRK00216 | 239 | ubiE ubiquinone/menaquinone biosynthesis methyltra | 97.94 | |
| PF13489 | 161 | Methyltransf_23: Methyltransferase domain; PDB: 3J | 97.91 | |
| PRK11705 | 383 | cyclopropane fatty acyl phospholipid synthase; Pro | 97.86 | |
| PRK06202 | 232 | hypothetical protein; Provisional | 97.83 | |
| PRK05134 | 233 | bifunctional 3-demethylubiquinone-9 3-methyltransf | 97.81 | |
| PRK00121 | 202 | trmB tRNA (guanine-N(7)-)-methyltransferase; Revie | 97.75 | |
| PRK10258 | 251 | biotin biosynthesis protein BioC; Provisional | 97.73 | |
| PF07021 | 193 | MetW: Methionine biosynthesis protein MetW; InterP | 97.73 | |
| TIGR01983 | 224 | UbiG ubiquinone biosynthesis O-methyltransferase. | 97.73 | |
| PRK00107 | 187 | gidB 16S rRNA methyltransferase GidB; Reviewed | 97.67 | |
| PF02353 | 273 | CMAS: Mycolic acid cyclopropane synthetase; InterP | 97.66 | |
| KOG1270 | 282 | consensus Methyltransferases [Coenzyme transport a | 97.65 | |
| PLN02233 | 261 | ubiquinone biosynthesis methyltransferase | 97.65 | |
| COG4627 | 185 | Uncharacterized protein conserved in bacteria [Fun | 97.61 | |
| PRK01544 | 506 | bifunctional N5-glutamine S-adenosyl-L-methionine- | 97.58 | |
| KOG2940 | 325 | consensus Predicted methyltransferase [General fun | 97.55 | |
| TIGR00537 | 179 | hemK_rel_arch HemK-related putative methylase. The | 97.54 | |
| PLN02244 | 340 | tocopherol O-methyltransferase | 97.54 | |
| PRK08317 | 241 | hypothetical protein; Provisional | 97.51 | |
| PRK12335 | 287 | tellurite resistance protein TehB; Provisional | 97.51 | |
| PF05401 | 201 | NodS: Nodulation protein S (NodS); InterPro: IPR00 | 97.49 | |
| PRK14103 | 255 | trans-aconitate 2-methyltransferase; Provisional | 97.49 | |
| smart00828 | 224 | PKS_MT Methyltransferase in polyketide synthase (P | 97.45 | |
| PRK15068 | 322 | tRNA mo(5)U34 methyltransferase; Provisional | 97.41 | |
| PF02353 | 273 | CMAS: Mycolic acid cyclopropane synthetase; InterP | 97.4 | |
| TIGR00091 | 194 | tRNA (guanine-N(7)-)-methyltransferase. In E. coli | 97.39 | |
| TIGR02469 | 124 | CbiT precorrin-6Y C5,15-methyltransferase (decarbo | 97.39 | |
| PLN03075 | 296 | nicotianamine synthase; Provisional | 97.38 | |
| TIGR00406 | 288 | prmA ribosomal protein L11 methyltransferase. Ribo | 97.37 | |
| TIGR01177 | 329 | conserved hypothetical protein TIGR01177. This fam | 97.37 | |
| TIGR00477 | 195 | tehB tellurite resistance protein TehB. Part of a | 97.36 | |
| TIGR02021 | 219 | BchM-ChlM magnesium protoporphyrin O-methyltransfe | 97.36 | |
| TIGR00138 | 181 | gidB 16S rRNA methyltransferase GidB. GidB (glucos | 97.35 | |
| PF05148 | 219 | Methyltransf_8: Hypothetical methyltransferase; In | 97.34 | |
| TIGR02752 | 231 | MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me | 97.34 | |
| TIGR02081 | 194 | metW methionine biosynthesis protein MetW. This pr | 97.32 | |
| TIGR00537 | 179 | hemK_rel_arch HemK-related putative methylase. The | 97.32 | |
| PTZ00098 | 263 | phosphoethanolamine N-methyltransferase; Provision | 97.31 | |
| TIGR03840 | 213 | TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d | 97.31 | |
| PRK11207 | 197 | tellurite resistance protein TehB; Provisional | 97.29 | |
| KOG1331 | 293 | consensus Predicted methyltransferase [General fun | 97.27 | |
| PRK08287 | 187 | cobalt-precorrin-6Y C(15)-methyltransferase; Valid | 97.26 | |
| PF12847 | 112 | Methyltransf_18: Methyltransferase domain; PDB: 3G | 97.25 | |
| PRK11088 | 272 | rrmA 23S rRNA methyltransferase A; Provisional | 97.24 | |
| TIGR00138 | 181 | gidB 16S rRNA methyltransferase GidB. GidB (glucos | 97.23 | |
| PRK00121 | 202 | trmB tRNA (guanine-N(7)-)-methyltransferase; Revie | 97.23 | |
| TIGR00406 | 288 | prmA ribosomal protein L11 methyltransferase. Ribo | 97.19 | |
| TIGR02072 | 240 | BioC biotin biosynthesis protein BioC. This enzyme | 97.18 | |
| KOG1975 | 389 | consensus mRNA cap methyltransferase [RNA processi | 97.15 | |
| KOG3045 | 325 | consensus Predicted RNA methylase involved in rRNA | 97.15 | |
| PRK11705 | 383 | cyclopropane fatty acyl phospholipid synthase; Pro | 97.14 | |
| TIGR00452 | 314 | methyltransferase, putative. Known examples to dat | 97.14 | |
| PRK01683 | 258 | trans-aconitate 2-methyltransferase; Provisional | 97.12 | |
| PRK14968 | 188 | putative methyltransferase; Provisional | 97.1 | |
| TIGR02716 | 306 | C20_methyl_CrtF C-20 methyltransferase BchU. Membe | 97.09 | |
| PF01209 | 233 | Ubie_methyltran: ubiE/COQ5 methyltransferase famil | 97.09 | |
| PLN02396 | 322 | hexaprenyldihydroxybenzoate methyltransferase | 97.07 | |
| PRK00517 | 250 | prmA ribosomal protein L11 methyltransferase; Revi | 97.07 | |
| PRK07580 | 230 | Mg-protoporphyrin IX methyl transferase; Validated | 97.06 | |
| PRK13944 | 205 | protein-L-isoaspartate O-methyltransferase; Provis | 97.05 | |
| cd02440 | 107 | AdoMet_MTases S-adenosylmethionine-dependent methy | 97.05 | |
| PRK09489 | 342 | rsmC 16S ribosomal RNA m2G1207 methyltransferase; | 97.05 | |
| PRK13255 | 218 | thiopurine S-methyltransferase; Reviewed | 97.04 | |
| PRK14121 | 390 | tRNA (guanine-N(7)-)-methyltransferase; Provisiona | 97.02 | |
| PRK11036 | 255 | putative S-adenosyl-L-methionine-dependent methylt | 97.01 | |
| PRK00517 | 250 | prmA ribosomal protein L11 methyltransferase; Revi | 96.97 | |
| TIGR03534 | 251 | RF_mod_PrmC protein-(glutamine-N5) methyltransfera | 96.95 | |
| PF08003 | 315 | Methyltransf_9: Protein of unknown function (DUF16 | 96.95 | |
| TIGR00438 | 188 | rrmJ cell division protein FtsJ. | 96.95 | |
| COG4106 | 257 | Tam Trans-aconitate methyltransferase [General fun | 96.95 | |
| PLN02585 | 315 | magnesium protoporphyrin IX methyltransferase | 96.93 | |
| PRK11188 | 209 | rrmJ 23S rRNA methyltransferase J; Provisional | 96.92 | |
| KOG1269 | 364 | consensus SAM-dependent methyltransferases [Lipid | 96.91 | |
| PRK14968 | 188 | putative methyltransferase; Provisional | 96.91 | |
| COG1041 | 347 | Predicted DNA modification methylase [DNA replicat | 96.9 | |
| TIGR03438 | 301 | probable methyltransferase. This model represents | 96.9 | |
| smart00138 | 264 | MeTrc Methyltransferase, chemotaxis proteins. Meth | 96.88 | |
| PRK09328 | 275 | N5-glutamine S-adenosyl-L-methionine-dependent met | 96.8 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 96.8 | |
| TIGR01934 | 223 | MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis | 96.79 | |
| PRK13942 | 212 | protein-L-isoaspartate O-methyltransferase; Provis | 96.77 | |
| COG4976 | 287 | Predicted methyltransferase (contains TPR repeat) | 96.75 | |
| PRK04266 | 226 | fibrillarin; Provisional | 96.74 | |
| PRK15001 | 378 | SAM-dependent 23S ribosomal RNA mG1835 methyltrans | 96.74 | |
| PRK05785 | 226 | hypothetical protein; Provisional | 96.71 | |
| TIGR00740 | 239 | methyltransferase, putative. A simple BLAST search | 96.71 | |
| TIGR03534 | 251 | RF_mod_PrmC protein-(glutamine-N5) methyltransfera | 96.69 | |
| PF08242 | 99 | Methyltransf_12: Methyltransferase domain; InterPr | 96.67 | |
| TIGR00563 | 426 | rsmB ribosomal RNA small subunit methyltransferase | 96.67 | |
| PRK10901 | 427 | 16S rRNA methyltransferase B; Provisional | 96.67 | |
| PF03848 | 192 | TehB: Tellurite resistance protein TehB; InterPro: | 96.61 | |
| PTZ00146 | 293 | fibrillarin; Provisional | 96.61 | |
| PRK13256 | 226 | thiopurine S-methyltransferase; Reviewed | 96.59 | |
| TIGR01983 | 224 | UbiG ubiquinone biosynthesis O-methyltransferase. | 96.57 | |
| PF05401 | 201 | NodS: Nodulation protein S (NodS); InterPro: IPR00 | 96.57 | |
| PF13659 | 117 | Methyltransf_26: Methyltransferase domain; PDB: 3G | 96.57 | |
| PRK14901 | 434 | 16S rRNA methyltransferase B; Provisional | 96.55 | |
| PRK00377 | 198 | cbiT cobalt-precorrin-6Y C(15)-methyltransferase; | 96.53 | |
| PTZ00146 | 293 | fibrillarin; Provisional | 96.53 | |
| TIGR00080 | 215 | pimt protein-L-isoaspartate(D-aspartate) O-methylt | 96.5 | |
| KOG1541 | 270 | consensus Predicted protein carboxyl methylase [Ge | 96.5 | |
| PRK15451 | 247 | tRNA cmo(5)U34 methyltransferase; Provisional | 96.49 | |
| PRK05134 | 233 | bifunctional 3-demethylubiquinone-9 3-methyltransf | 96.48 | |
| COG0500 | 257 | SmtA SAM-dependent methyltransferases [Secondary m | 96.47 | |
| PRK11188 | 209 | rrmJ 23S rRNA methyltransferase J; Provisional | 96.46 | |
| PRK08287 | 187 | cobalt-precorrin-6Y C(15)-methyltransferase; Valid | 96.44 | |
| PF03291 | 331 | Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 | 96.44 | |
| PRK14904 | 445 | 16S rRNA methyltransferase B; Provisional | 96.42 | |
| TIGR00091 | 194 | tRNA (guanine-N(7)-)-methyltransferase. In E. coli | 96.39 | |
| COG2226 | 238 | UbiE Methylase involved in ubiquinone/menaquinone | 96.35 | |
| PF05148 | 219 | Methyltransf_8: Hypothetical methyltransferase; In | 96.34 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 96.33 | |
| PRK10611 | 287 | chemotaxis methyltransferase CheR; Provisional | 96.32 | |
| COG2230 | 283 | Cfa Cyclopropane fatty acid synthase and related m | 96.23 | |
| PRK06202 | 232 | hypothetical protein; Provisional | 96.2 | |
| PRK00377 | 198 | cbiT cobalt-precorrin-6Y C(15)-methyltransferase; | 96.19 | |
| PRK04266 | 226 | fibrillarin; Provisional | 96.15 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 96.07 | |
| PRK14903 | 431 | 16S rRNA methyltransferase B; Provisional | 96.07 | |
| PF06325 | 295 | PrmA: Ribosomal protein L11 methyltransferase (Prm | 96.02 | |
| TIGR03704 | 251 | PrmC_rel_meth putative protein-(glutamine-N5) meth | 96.0 | |
| TIGR00446 | 264 | nop2p NOL1/NOP2/sun family putative RNA methylase. | 95.95 | |
| PRK13942 | 212 | protein-L-isoaspartate O-methyltransferase; Provis | 95.94 | |
| PRK09489 | 342 | rsmC 16S ribosomal RNA m2G1207 methyltransferase; | 95.91 | |
| cd02440 | 107 | AdoMet_MTases S-adenosylmethionine-dependent methy | 95.85 | |
| TIGR00080 | 215 | pimt protein-L-isoaspartate(D-aspartate) O-methylt | 95.84 | |
| PRK00216 | 239 | ubiE ubiquinone/menaquinone biosynthesis methyltra | 95.83 | |
| PRK00312 | 212 | pcm protein-L-isoaspartate O-methyltransferase; Re | 95.82 | |
| PRK06922 | 677 | hypothetical protein; Provisional | 95.82 | |
| TIGR02716 | 306 | C20_methyl_CrtF C-20 methyltransferase BchU. Membe | 95.8 | |
| PRK14121 | 390 | tRNA (guanine-N(7)-)-methyltransferase; Provisiona | 95.75 | |
| PF03848 | 192 | TehB: Tellurite resistance protein TehB; InterPro: | 95.71 | |
| PF13847 | 152 | Methyltransf_31: Methyltransferase domain; PDB: 3T | 95.69 | |
| COG4976 | 287 | Predicted methyltransferase (contains TPR repeat) | 95.63 | |
| PF01739 | 196 | CheR: CheR methyltransferase, SAM binding domain; | 95.59 | |
| PF05175 | 170 | MTS: Methyltransferase small domain; InterPro: IPR | 95.59 | |
| TIGR00536 | 284 | hemK_fam HemK family putative methylases. The gene | 95.57 | |
| PRK13944 | 205 | protein-L-isoaspartate O-methyltransferase; Provis | 95.56 | |
| PF01728 | 181 | FtsJ: FtsJ-like methyltransferase; InterPro: IPR00 | 95.54 | |
| PRK14902 | 444 | 16S rRNA methyltransferase B; Provisional | 95.51 | |
| PRK11805 | 307 | N5-glutamine S-adenosyl-L-methionine-dependent met | 95.42 | |
| TIGR03533 | 284 | L3_gln_methyl protein-(glutamine-N5) methyltransfe | 95.37 | |
| PF00891 | 241 | Methyltransf_2: O-methyltransferase; InterPro: IPR | 95.36 | |
| TIGR00438 | 188 | rrmJ cell division protein FtsJ. | 95.35 | |
| COG2890 | 280 | HemK Methylase of polypeptide chain release factor | 95.34 | |
| TIGR02081 | 194 | metW methionine biosynthesis protein MetW. This pr | 95.32 | |
| PRK04457 | 262 | spermidine synthase; Provisional | 95.26 | |
| PRK01544 | 506 | bifunctional N5-glutamine S-adenosyl-L-methionine- | 95.26 | |
| PLN02490 | 340 | MPBQ/MSBQ methyltransferase | 95.23 | |
| TIGR02469 | 124 | CbiT precorrin-6Y C5,15-methyltransferase (decarbo | 95.11 | |
| PRK15001 | 378 | SAM-dependent 23S ribosomal RNA mG1835 methyltrans | 95.06 | |
| PF07021 | 193 | MetW: Methionine biosynthesis protein MetW; InterP | 95.05 | |
| KOG3010 | 261 | consensus Methyltransferase [General function pred | 94.93 | |
| PF06080 | 204 | DUF938: Protein of unknown function (DUF938); Inte | 94.92 | |
| PRK00811 | 283 | spermidine synthase; Provisional | 94.9 | |
| KOG3045 | 325 | consensus Predicted RNA methylase involved in rRNA | 94.85 | |
| TIGR03587 | 204 | Pse_Me-ase pseudaminic acid biosynthesis-associate | 94.83 | |
| PF00891 | 241 | Methyltransf_2: O-methyltransferase; InterPro: IPR | 94.79 | |
| PRK07580 | 230 | Mg-protoporphyrin IX methyl transferase; Validated | 94.76 | |
| PRK13699 | 227 | putative methylase; Provisional | 94.75 | |
| PRK14966 | 423 | unknown domain/N5-glutamine S-adenosyl-L-methionin | 94.73 | |
| PRK13943 | 322 | protein-L-isoaspartate O-methyltransferase; Provis | 94.73 | |
| TIGR03533 | 284 | L3_gln_methyl protein-(glutamine-N5) methyltransfe | 94.65 | |
| COG2521 | 287 | Predicted archaeal methyltransferase [General func | 94.59 | |
| PRK07402 | 196 | precorrin-6B methylase; Provisional | 94.58 | |
| TIGR02021 | 219 | BchM-ChlM magnesium protoporphyrin O-methyltransfe | 94.51 | |
| PRK09328 | 275 | N5-glutamine S-adenosyl-L-methionine-dependent met | 94.47 | |
| KOG2352 | 482 | consensus Predicted spermine/spermidine synthase [ | 94.44 | |
| PRK11805 | 307 | N5-glutamine S-adenosyl-L-methionine-dependent met | 94.35 | |
| PF07942 | 270 | N2227: N2227-like protein; InterPro: IPR012901 Thi | 94.19 | |
| PF05175 | 170 | MTS: Methyltransferase small domain; InterPro: IPR | 93.92 | |
| KOG2361 | 264 | consensus Predicted methyltransferase [General fun | 93.81 | |
| PRK00312 | 212 | pcm protein-L-isoaspartate O-methyltransferase; Re | 93.78 | |
| PF05219 | 265 | DREV: DREV methyltransferase; InterPro: IPR007884 | 93.76 | |
| PF11968 | 219 | DUF3321: Putative methyltransferase (DUF3321); Int | 93.69 | |
| TIGR03438 | 301 | probable methyltransferase. This model represents | 93.55 | |
| TIGR00536 | 284 | hemK_fam HemK family putative methylases. The gene | 93.54 | |
| COG0500 | 257 | SmtA SAM-dependent methyltransferases [Secondary m | 93.49 | |
| COG2230 | 283 | Cfa Cyclopropane fatty acid synthase and related m | 93.44 | |
| smart00650 | 169 | rADc Ribosomal RNA adenine dimethylases. | 93.44 | |
| COG2264 | 300 | PrmA Ribosomal protein L11 methylase [Translation, | 93.25 | |
| PF02390 | 195 | Methyltransf_4: Putative methyltransferase ; Inter | 93.21 | |
| PF05724 | 218 | TPMT: Thiopurine S-methyltransferase (TPMT); Inter | 93.2 | |
| PHA03411 | 279 | putative methyltransferase; Provisional | 93.2 | |
| PRK07402 | 196 | precorrin-6B methylase; Provisional | 93.2 | |
| PF02390 | 195 | Methyltransf_4: Putative methyltransferase ; Inter | 93.15 | |
| PRK14966 | 423 | unknown domain/N5-glutamine S-adenosyl-L-methionin | 92.77 | |
| COG0220 | 227 | Predicted S-adenosylmethionine-dependent methyltra | 92.56 | |
| PF05219 | 265 | DREV: DREV methyltransferase; InterPro: IPR007884 | 92.44 | |
| TIGR00417 | 270 | speE spermidine synthase. the SpeE subunit of sper | 92.35 | |
| KOG1271 | 227 | consensus Methyltransferases [General function pre | 92.29 | |
| TIGR01177 | 329 | conserved hypothetical protein TIGR01177. This fam | 92.29 | |
| PRK01581 | 374 | speE spermidine synthase; Validated | 92.24 | |
| PRK04457 | 262 | spermidine synthase; Provisional | 92.17 | |
| PRK11783 | 702 | rlmL 23S rRNA m(2)G2445 methyltransferase; Provisi | 92.16 | |
| PF13659 | 117 | Methyltransf_26: Methyltransferase domain; PDB: 3G | 92.07 | |
| PF03269 | 177 | DUF268: Caenorhabditis protein of unknown function | 92.06 | |
| COG1352 | 268 | CheR Methylase of chemotaxis methyl-accepting prot | 91.91 | |
| PF01170 | 179 | UPF0020: Putative RNA methylase family UPF0020; In | 91.72 | |
| TIGR00417 | 270 | speE spermidine synthase. the SpeE subunit of sper | 91.71 | |
| PLN02781 | 234 | Probable caffeoyl-CoA O-methyltransferase | 91.67 | |
| PLN02781 | 234 | Probable caffeoyl-CoA O-methyltransferase | 91.38 | |
| COG2264 | 300 | PrmA Ribosomal protein L11 methylase [Translation, | 91.33 | |
| TIGR00563 | 426 | rsmB ribosomal RNA small subunit methyltransferase | 91.22 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 91.16 | |
| PF06325 | 295 | PrmA: Ribosomal protein L11 methyltransferase (Prm | 91.13 | |
| KOG1540 | 296 | consensus Ubiquinone biosynthesis methyltransferas | 91.11 | |
| PRK00811 | 283 | spermidine synthase; Provisional | 91.03 | |
| PRK13255 | 218 | thiopurine S-methyltransferase; Reviewed | 91.02 | |
| PF01234 | 256 | NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: I | 90.93 | |
| PRK14902 | 444 | 16S rRNA methyltransferase B; Provisional | 90.86 | |
| COG1092 | 393 | Predicted SAM-dependent methyltransferases [Genera | 90.75 | |
| PLN02366 | 308 | spermidine synthase | 90.5 | |
| PRK11524 | 284 | putative methyltransferase; Provisional | 90.17 | |
| PRK03612 | 521 | spermidine synthase; Provisional | 90.05 | |
| PF13649 | 101 | Methyltransf_25: Methyltransferase domain; PDB: 3B | 89.86 | |
| COG2813 | 300 | RsmC 16S RNA G1207 methylase RsmC [Translation, ri | 89.73 | |
| PLN03075 | 296 | nicotianamine synthase; Provisional | 89.71 | |
| PF05891 | 218 | Methyltransf_PK: AdoMet dependent proline di-methy | 89.24 | |
| COG4123 | 248 | Predicted O-methyltransferase [General function pr | 88.77 | |
| PF05185 | 448 | PRMT5: PRMT5 arginine-N-methyltransferase; InterPr | 88.29 | |
| PF08003 | 315 | Methyltransf_9: Protein of unknown function (DUF16 | 88.24 | |
| PRK14901 | 434 | 16S rRNA methyltransferase B; Provisional | 88.19 | |
| TIGR03840 | 213 | TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d | 88.11 | |
| PHA03412 | 241 | putative methyltransferase; Provisional | 87.68 | |
| COG2519 | 256 | GCD14 tRNA(1-methyladenosine) methyltransferase an | 87.59 | |
| PF10294 | 173 | Methyltransf_16: Putative methyltransferase; Inter | 86.9 | |
| PRK13168 | 443 | rumA 23S rRNA m(5)U1939 methyltransferase; Reviewe | 86.87 | |
| PRK11933 | 470 | yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; | 86.77 | |
| PRK11783 | 702 | rlmL 23S rRNA m(2)G2445 methyltransferase; Provisi | 86.63 | |
| KOG3201 | 201 | consensus Uncharacterized conserved protein [Funct | 86.55 | |
| PRK15128 | 396 | 23S rRNA m(5)C1962 methyltransferase; Provisional | 86.38 | |
| PF01135 | 209 | PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl | 86.2 | |
| PF06859 | 110 | Bin3: Bicoid-interacting protein 3 (Bin3); InterPr | 85.91 | |
| COG4798 | 238 | Predicted methyltransferase [General function pred | 85.64 | |
| PRK10901 | 427 | 16S rRNA methyltransferase B; Provisional | 85.56 | |
| PRK01581 | 374 | speE spermidine synthase; Validated | 85.55 | |
| KOG4300 | 252 | consensus Predicted methyltransferase [General fun | 85.45 | |
| TIGR00446 | 264 | nop2p NOL1/NOP2/sun family putative RNA methylase. | 85.36 | |
| COG4122 | 219 | Predicted O-methyltransferase [General function pr | 85.34 | |
| TIGR03704 | 251 | PrmC_rel_meth putative protein-(glutamine-N5) meth | 85.16 | |
| COG2813 | 300 | RsmC 16S RNA G1207 methylase RsmC [Translation, ri | 85.14 | |
| KOG1271 | 227 | consensus Methyltransferases [General function pre | 85.08 | |
| COG0144 | 355 | Sun tRNA and rRNA cytosine-C5-methylases [Translat | 84.05 | |
| PLN02232 | 160 | ubiquinone biosynthesis methyltransferase | 83.86 | |
| PRK13943 | 322 | protein-L-isoaspartate O-methyltransferase; Provis | 83.32 | |
| PRK03612 | 521 | spermidine synthase; Provisional | 83.02 | |
| PRK13168 | 443 | rumA 23S rRNA m(5)U1939 methyltransferase; Reviewe | 82.88 | |
| TIGR00478 | 228 | tly hemolysin TlyA family protein. Hemolysins are | 81.72 | |
| COG3963 | 194 | Phospholipid N-methyltransferase [Lipid metabolism | 81.69 | |
| PLN02823 | 336 | spermine synthase | 81.53 | |
| COG4123 | 248 | Predicted O-methyltransferase [General function pr | 81.51 | |
| PF10672 | 286 | Methyltrans_SAM: S-adenosylmethionine-dependent me | 81.09 | |
| PLN02366 | 308 | spermidine synthase | 80.55 | |
| PLN02585 | 315 | magnesium protoporphyrin IX methyltransferase | 80.55 |
| >PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-157 Score=1243.01 Aligned_cols=427 Identities=52% Similarity=1.016 Sum_probs=414.6
Q ss_pred CCCCCCChhHhhhc--cccchhhhhcCCCCCCCCCccccCCCCCCCCCCCCCccchh-----------------------
Q 009719 88 DHMPCEDPRRNSQL--SREMNFYRERHCPLPDQTPLCLIPPPRGYKIPVPWPESLSK----------------------- 142 (527)
Q Consensus 88 ~y~PC~d~~~~~~~--~~~~~~~reRhCp~~~~~~~Clvp~P~gY~~P~~WP~Srd~----------------------- 142 (527)
|||||+|+.+++++ ++++++|||||||+.+++++||||+|+|||+|||||+|||+
T Consensus 1 dy~PC~D~~~~~~~~~~~~~~~~rERhCP~~~~~~~CLVp~P~gYk~P~~WP~SRd~iW~~Nvph~~L~~~K~~qnWv~~ 80 (506)
T PF03141_consen 1 DYIPCLDNSRAIKFLLSRERMEHRERHCPPPEERLRCLVPPPKGYKTPIPWPKSRDYIWYANVPHTKLAEEKADQNWVRV 80 (506)
T ss_pred CCcCCCCHHHHHhhccCcccccEeeccCcCCCCCCccccCCCccCCCCCCCCcccceeeecccCchHHhhhcccccceee
Confidence 79999999999999 99999999999999999999999999999999999999999
Q ss_pred -----------------------------------------------hhccccccccCCeeEEeeccCcChHHHHHHHHH
Q 009719 143 -----------------------------------------------VASFGGSMLSENILTLSFAPRDSHKAQIQFALE 175 (527)
Q Consensus 143 -----------------------------------------------vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~e 175 (527)
+|||||+|+++||++|++||.|.|++|+|||+|
T Consensus 81 ~gd~~~FPgggt~F~~Ga~~Yid~i~~~~~~~~~~g~iR~~LDvGcG~aSF~a~l~~r~V~t~s~a~~d~~~~qvqfale 160 (506)
T PF03141_consen 81 EGDKFRFPGGGTMFPHGADHYIDQIAEMIPLIKWGGGIRTALDVGCGVASFGAYLLERNVTTMSFAPNDEHEAQVQFALE 160 (506)
T ss_pred cCCEEEeCCCCccccCCHHHHHHHHHHHhhccccCCceEEEEeccceeehhHHHHhhCCceEEEcccccCCchhhhhhhh
Confidence 899999999999999999999999999999999
Q ss_pred cCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCCCCCCCc---hhHHHHHHHH
Q 009719 176 RGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQ---DKEWADLQAV 252 (527)
Q Consensus 176 Rg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp~~~~~~---~~~w~~i~~l 252 (527)
||+|+++.+.++++||||+++||+|||++|+++|...++.+|.|++|||||||||++|+||+|.... ..+|+.|+++
T Consensus 161 RGvpa~~~~~~s~rLPfp~~~fDmvHcsrc~i~W~~~~g~~l~evdRvLRpGGyfv~S~ppv~~r~~~~~~~~~~~~~~l 240 (506)
T PF03141_consen 161 RGVPAMIGVLGSQRLPFPSNAFDMVHCSRCLIPWHPNDGFLLFEVDRVLRPGGYFVLSGPPVYQRTDEDLEEEWNAMEDL 240 (506)
T ss_pred cCcchhhhhhccccccCCccchhhhhcccccccchhcccceeehhhhhhccCceEEecCCcccccchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999889999999999999999999999994333 3479999999
Q ss_pred HHhcceEEeeeecceEEEeCCCccccccccC-CCCCCCCCCCCCCCcccccccccccccccCCCccccCCCCCCCCcccc
Q 009719 253 ARALCYELIAVDGNTVIWKKPVGESCLSNQN-EFGLELCDESDDPNYAWYFKLKKCVSGTSSVKGEYAVGTIPKWPQRLT 331 (527)
Q Consensus 253 ~~~mcW~~~~~~~~v~iwrKp~~~~c~~~~~-~~~p~~C~~~~d~d~~wy~~~~~Ci~~~~~~~~~~~~~~~~~wP~Rl~ 331 (527)
|++|||++++++++++|||||.+++||.+|+ .+.||+|++++|||++||++|++||||+|++.++.+++++++||+||+
T Consensus 241 ~~~lCW~~va~~~~~aIwqKp~~~~Cy~~r~~~~~pplC~~~~dpd~aWY~~l~~Cit~~p~~~~~~~~~~~~~WP~RL~ 320 (506)
T PF03141_consen 241 AKSLCWKKVAEKGDTAIWQKPTNNSCYQKRKPGKSPPLCDSSDDPDAAWYVPLEACITPLPEVSSEIAGGWLPKWPERLN 320 (506)
T ss_pred HHHHHHHHheeeCCEEEEeccCCchhhhhccCCCCCCCCCCCCCCcchhhcchhhhcCcCCcccccccccCCCCChhhhc
Confidence 9999999999999999999999999999965 499999999999999999999999999999988999999999999999
Q ss_pred CCCccccc---cccCccccchhhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCCC
Q 009719 332 KAPSRALV---MKNGYDVFEADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSS 408 (527)
Q Consensus 332 ~~p~rl~~---~g~~~~~f~~d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~n 408 (527)
++|+||.. .|+++|.|++|+++|+++|++|+++++..+++++||||||||||||||||||+++|||||||||+.++|
T Consensus 321 ~~P~rl~~~~~~g~~~e~F~~Dt~~Wk~~V~~Y~~l~~~~i~~~~iRNVMDMnAg~GGFAAAL~~~~VWVMNVVP~~~~n 400 (506)
T PF03141_consen 321 AVPPRLSSGSIPGISPEEFKEDTKHWKKRVSHYKKLLGLAIKWGRIRNVMDMNAGYGGFAAALIDDPVWVMNVVPVSGPN 400 (506)
T ss_pred cCchhhhcCCcCCCCHHHHHHHHHHHHHHHHHHHHhhcccccccceeeeeeecccccHHHHHhccCCceEEEecccCCCC
Confidence 99999964 899999999999999999999999888789999999999999999999999999999999999999999
Q ss_pred chhHhhhccccccccccCCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHHHHHH
Q 009719 409 TLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDK 488 (527)
Q Consensus 409 tl~vi~eRGLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~ 488 (527)
||++||||||||+||||||+|||||||||||||+++||.|+ +||+|++|||||||||||||++||||+.+++++
T Consensus 401 tL~vIydRGLIG~yhDWCE~fsTYPRTYDLlHA~~lfs~~~------~rC~~~~illEmDRILRP~G~~iiRD~~~vl~~ 474 (506)
T PF03141_consen 401 TLPVIYDRGLIGVYHDWCEAFSTYPRTYDLLHADGLFSLYK------DRCEMEDILLEMDRILRPGGWVIIRDTVDVLEK 474 (506)
T ss_pred cchhhhhcccchhccchhhccCCCCcchhheehhhhhhhhc------ccccHHHHHHHhHhhcCCCceEEEeccHHHHHH
Confidence 99999999999999999999999999999999999999997 899999999999999999999999999999999
Q ss_pred HHHHHhcCCceeEEecCCCCCCCCceEEEEEe
Q 009719 489 VSRIANTVRWTAAVHDKEPGSNGREKILVATK 520 (527)
Q Consensus 489 i~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K 520 (527)
|++|+++|||+++++|+|+|++++||||||||
T Consensus 475 v~~i~~~lrW~~~~~d~e~g~~~~EkiL~~~K 506 (506)
T PF03141_consen 475 VKKIAKSLRWEVRIHDTEDGPDGPEKILICQK 506 (506)
T ss_pred HHHHHHhCcceEEEEecCCCCCCCceEEEEEC
Confidence 99999999999999999999999999999998
|
; GO: 0008168 methyltransferase activity |
| >PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=313.61 Aligned_cols=197 Identities=20% Similarity=0.316 Sum_probs=162.3
Q ss_pred ccccccccccCCCccccCCCCCCCCcccc-----CCCcc-ccc-cc------cCcc--ccchhhHHHHHHHHHHHHHhhh
Q 009719 303 KLKKCVSGTSSVKGEYAVGTIPKWPQRLT-----KAPSR-ALV-MK------NGYD--VFEADSRRWRRRVAYYKNTLNV 367 (527)
Q Consensus 303 ~~~~Ci~~~~~~~~~~~~~~~~~wP~Rl~-----~~p~r-l~~-~g------~~~~--~f~~d~~~W~~~v~~Y~~~l~~ 367 (527)
....|+.|+|.+. ..+.+||+... ++|.. |+. ++ +..+ .|......++++|++|++.|.+
T Consensus 33 ~~~~CLVp~P~gY-----k~P~~WP~SRd~iW~~Nvph~~L~~~K~~qnWv~~~gd~~~FPgggt~F~~Ga~~Yid~i~~ 107 (506)
T PF03141_consen 33 ERLRCLVPPPKGY-----KTPIPWPKSRDYIWYANVPHTKLAEEKADQNWVRVEGDKFRFPGGGTMFPHGADHYIDQIAE 107 (506)
T ss_pred CCCccccCCCccC-----CCCCCCCcccceeeecccCchHHhhhcccccceeecCCEEEeCCCCccccCCHHHHHHHHHH
Confidence 4568999999754 57899999983 34433 532 22 2222 3889999999999999988887
Q ss_pred cc----CCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccc---cccccccCCCCCCCCCccchh
Q 009719 368 KL----GTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGL---IGVYHDWCEPFSTYPRTYDLI 439 (527)
Q Consensus 368 ~i----~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGL---iG~~hdwce~fstYPrtyDLi 439 (527)
.+ ..++||++||+|||+|+|||+|.+++|.+|+++|.+.+ +++||++|||+ ||++.+-..|| +.|+|||+
T Consensus 108 ~~~~~~~~g~iR~~LDvGcG~aSF~a~l~~r~V~t~s~a~~d~~~~qvqfaleRGvpa~~~~~~s~rLPf--p~~~fDmv 185 (506)
T PF03141_consen 108 MIPLIKWGGGIRTALDVGCGVASFGAYLLERNVTTMSFAPNDEHEAQVQFALERGVPAMIGVLGSQRLPF--PSNAFDMV 185 (506)
T ss_pred HhhccccCCceEEEEeccceeehhHHHHhhCCceEEEcccccCCchhhhhhhhcCcchhhhhhccccccC--Cccchhhh
Confidence 65 45899999999999999999999999999999999988 99999999997 55555555544 34999999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC----------HHHHHHHHHHHhcCCceeEEecCCCCC
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS----------PEVIDKVSRIANTVRWTAAVHDKEPGS 509 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~----------~~~~~~i~~i~~~l~W~~~~~~~e~~~ 509 (527)
||++|.+.|. ..+ +.+|+|+|||||||||||++.. .+++++|++++++|||+....
T Consensus 186 Hcsrc~i~W~----~~~----g~~l~evdRvLRpGGyfv~S~ppv~~r~~~~~~~~~~~~~~l~~~lCW~~va~------ 251 (506)
T PF03141_consen 186 HCSRCLIPWH----PND----GFLLFEVDRVLRPGGYFVLSGPPVYQRTDEDLEEEWNAMEDLAKSLCWKKVAE------ 251 (506)
T ss_pred hcccccccch----hcc----cceeehhhhhhccCceEEecCCcccccchHHHHHHHHHHHHHHHHHHHHHhee------
Confidence 9999999997 223 6799999999999999999852 468999999999999999886
Q ss_pred CCCceEEEEEecc
Q 009719 510 NGREKILVATKSL 522 (527)
Q Consensus 510 ~~~ekiLi~~K~~ 522 (527)
+..+.|+||+.
T Consensus 252 --~~~~aIwqKp~ 262 (506)
T PF03141_consen 252 --KGDTAIWQKPT 262 (506)
T ss_pred --eCCEEEEeccC
Confidence 34599999974
|
; GO: 0008168 methyltransferase activity |
| >COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.4e-13 Score=137.24 Aligned_cols=77 Identities=30% Similarity=0.335 Sum_probs=67.3
Q ss_pred EEeeccCcChHHHHHHHHHcCCC-----cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEE
Q 009719 157 TLSFAPRDSHKAQIQFALERGIP-----AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLV 231 (527)
Q Consensus 157 ~msiAp~D~seaqvq~A~eRg~p-----a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lv 231 (527)
.-.+...|.++.|+..|++|... ..+.++|++.|||+|+|||+|.|++.|+++++.+. +|+|+.|||||||+++
T Consensus 75 ~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sFD~vt~~fglrnv~d~~~-aL~E~~RVlKpgG~~~ 153 (238)
T COG2226 75 TGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSFDAVTISFGLRNVTDIDK-ALKEMYRVLKPGGRLL 153 (238)
T ss_pred CceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCCCCCCccCEEEeeehhhcCCCHHH-HHHHHHHhhcCCeEEE
Confidence 44556668899999999988543 56789999999999999999999999999998877 9999999999999998
Q ss_pred Eec
Q 009719 232 ISG 234 (527)
Q Consensus 232 iS~ 234 (527)
+-.
T Consensus 154 vle 156 (238)
T COG2226 154 VLE 156 (238)
T ss_pred EEE
Confidence 743
|
|
| >PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=99.35 E-value=6.6e-13 Score=108.73 Aligned_cols=85 Identities=27% Similarity=0.370 Sum_probs=65.2
Q ss_pred hccccccccC-CeeEEeeccCcChHHHHHHHHHcCCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHH
Q 009719 144 ASFGGSMLSE-NILTLSFAPRDSHKAQIQFALERGIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEV 220 (527)
Q Consensus 144 gsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eRg~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei 220 (527)
|.++..|.++ +... ...|.++++++.|+++... ..+..++.+.|||+++|||+|+|..+++|+.+ ...+++|+
T Consensus 8 G~~~~~l~~~~~~~v---~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~sfD~v~~~~~~~~~~~-~~~~l~e~ 83 (95)
T PF08241_consen 8 GRFAAALAKRGGASV---TGIDISEEMLEQARKRLKNEGVSFRQGDAEDLPFPDNSFDVVFSNSVLHHLED-PEAALREI 83 (95)
T ss_dssp SHHHHHHHHTTTCEE---EEEES-HHHHHHHHHHTTTSTEEEEESBTTSSSS-TT-EEEEEEESHGGGSSH-HHHHHHHH
T ss_pred CHHHHHHHhccCCEE---EEEeCCHHHHHHHHhcccccCchheeehHHhCccccccccccccccceeeccC-HHHHHHHH
Confidence 4455566666 5543 3448889999999988643 34778899999999999999999999988844 44599999
Q ss_pred hhcccCCcEEEE
Q 009719 221 DRLLRPGGYLVI 232 (527)
Q Consensus 221 ~RVLRPGG~lvi 232 (527)
.|||||||++++
T Consensus 84 ~rvLk~gG~l~~ 95 (95)
T PF08241_consen 84 YRVLKPGGRLVI 95 (95)
T ss_dssp HHHEEEEEEEEE
T ss_pred HHHcCcCeEEeC
Confidence 999999999986
|
The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B .... |
| >PLN02336 phosphoethanolamine N-methyltransferase | Back alignment and domain information |
|---|
Probab=99.35 E-value=1e-12 Score=140.94 Aligned_cols=90 Identities=13% Similarity=0.157 Sum_probs=64.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC--C-CcEEeecccc--CCCCCCCcccEEEecCcccccccCh-HHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG--I-PAFVAMLGTR--RLPFPAFSFDIVHCSRCLIPFTAYN-ATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg--~-pa~~~v~dae--~LPFpD~SFDlV~cs~~l~hw~d~~-~~a 216 (527)
.|.++.+|..+.-.+ ...|.++.+++.|.++. . .+.+.++|+. .+||++++||+|+|..+++|+.+.. ..+
T Consensus 48 ~G~~~~~la~~~~~v---~giD~s~~~l~~a~~~~~~~~~i~~~~~d~~~~~~~~~~~~fD~I~~~~~l~~l~~~~~~~~ 124 (475)
T PLN02336 48 IGRFTGELAKKAGQV---IALDFIESVIKKNESINGHYKNVKFMCADVTSPDLNISDGSVDLIFSNWLLMYLSDKEVENL 124 (475)
T ss_pred cCHHHHHHHhhCCEE---EEEeCCHHHHHHHHHHhccCCceEEEEecccccccCCCCCCEEEEehhhhHHhCCHHHHHHH
Confidence 344444555544332 33377888888876542 1 2456666764 6899999999999999998887653 359
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
|.|+.|+|||||++++...
T Consensus 125 l~~~~r~Lk~gG~l~~~d~ 143 (475)
T PLN02336 125 AERMVKWLKVGGYIFFRES 143 (475)
T ss_pred HHHHHHhcCCCeEEEEEec
Confidence 9999999999999999653
|
|
| >PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities [] | Back alignment and domain information |
|---|
Probab=99.23 E-value=5.5e-12 Score=125.10 Aligned_cols=75 Identities=33% Similarity=0.456 Sum_probs=56.4
Q ss_pred eeccCcChHHHHHHHHHc----CC-CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEe
Q 009719 159 SFAPRDSHKAQIQFALER----GI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 159 siAp~D~seaqvq~A~eR----g~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS 233 (527)
.+...|.++.|++.|+++ +. .+.+.++|++.|||+|+|||+|+|++++++.++... +|+|+.|||||||+|++-
T Consensus 74 ~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp~~d~sfD~v~~~fglrn~~d~~~-~l~E~~RVLkPGG~l~il 152 (233)
T PF01209_consen 74 KVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLPFPDNSFDAVTCSFGLRNFPDRER-ALREMYRVLKPGGRLVIL 152 (233)
T ss_dssp EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB--S-TT-EEEEEEES-GGG-SSHHH-HHHHHHHHEEEEEEEEEE
T ss_pred EEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhcCCCCceeEEEHHhhHHhhCCHHH-HHHHHHHHcCCCeEEEEe
Confidence 344448899999999876 22 467888999999999999999999999999887666 999999999999999984
Q ss_pred c
Q 009719 234 G 234 (527)
Q Consensus 234 ~ 234 (527)
.
T Consensus 153 e 153 (233)
T PF01209_consen 153 E 153 (233)
T ss_dssp E
T ss_pred e
Confidence 3
|
Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C. |
| >PLN02232 ubiquinone biosynthesis methyltransferase | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.3e-10 Score=108.27 Aligned_cols=71 Identities=24% Similarity=0.188 Sum_probs=60.9
Q ss_pred CcChHHHHHHHHHcC--------CCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 163 RDSHKAQIQFALERG--------IPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 163 ~D~seaqvq~A~eRg--------~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
.|.|+.|++.|++|. ..+.+.++|++.|||++++||+|+++.+++|+.+... +|+|++|||||||+|++..
T Consensus 3 vD~S~~ML~~A~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~v~~~~~l~~~~d~~~-~l~ei~rvLkpGG~l~i~d 81 (160)
T PLN02232 3 LDFSSEQLAVAATRQSLKARSCYKCIEWIEGDAIDLPFDDCEFDAVTMGYGLRNVVDRLR-AMKEMYRVLKPGSRVSILD 81 (160)
T ss_pred EcCCHHHHHHHHHhhhcccccCCCceEEEEechhhCCCCCCCeeEEEecchhhcCCCHHH-HHHHHHHHcCcCeEEEEEE
Confidence 388999999997652 1256788999999999999999999999988876655 9999999999999999864
|
|
| >PLN02233 ubiquinone biosynthesis methyltransferase | Back alignment and domain information |
|---|
Probab=99.00 E-value=5.5e-10 Score=112.01 Aligned_cols=74 Identities=22% Similarity=0.171 Sum_probs=62.0
Q ss_pred ccCcChHHHHHHHHHcC-------C-CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEE
Q 009719 161 APRDSHKAQIQFALERG-------I-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 161 Ap~D~seaqvq~A~eRg-------~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lvi 232 (527)
...|.+++|++.|+++. . .+.+.++|++.|||++++||+|+|+.+++|+++... +|+|+.|||||||+|++
T Consensus 102 ~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~lp~~~~sfD~V~~~~~l~~~~d~~~-~l~ei~rvLkpGG~l~i 180 (261)
T PLN02233 102 MGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATDLPFDDCYFDAITMGYGLRNVVDRLK-AMQEMYRVLKPGSRVSI 180 (261)
T ss_pred EEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccccCCCCCCCEeEEEEecccccCCCHHH-HHHHHHHHcCcCcEEEE
Confidence 33477889999997652 1 345778899999999999999999999988876655 99999999999999999
Q ss_pred ecC
Q 009719 233 SGP 235 (527)
Q Consensus 233 S~p 235 (527)
...
T Consensus 181 ~d~ 183 (261)
T PLN02233 181 LDF 183 (261)
T ss_pred EEC
Confidence 764
|
|
| >KOG1540 consensus Ubiquinone biosynthesis methyltransferase COQ5 [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.5e-09 Score=109.23 Aligned_cols=70 Identities=23% Similarity=0.230 Sum_probs=58.7
Q ss_pred cChHHHHHHHHHc----CCC----cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALER----GIP----AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p----a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|+++.|+..+++| ++. ..+..+|++.|||+|++||+.+.+..+.+|++.++ +|+|++|||||||+|.+-.
T Consensus 137 Dinp~mL~vgkqRa~~~~l~~~~~~~w~~~dAE~LpFdd~s~D~yTiafGIRN~th~~k-~l~EAYRVLKpGGrf~cLe 214 (296)
T KOG1540|consen 137 DINPHMLAVGKQRAKKRPLKASSRVEWVEGDAEDLPFDDDSFDAYTIAFGIRNVTHIQK-ALREAYRVLKPGGRFSCLE 214 (296)
T ss_pred eCCHHHHHHHHHHHhhcCCCcCCceEEEeCCcccCCCCCCcceeEEEecceecCCCHHH-HHHHHHHhcCCCcEEEEEE
Confidence 5566787777655 332 34567899999999999999999999999999887 9999999999999998743
|
|
| >PRK10258 biotin biosynthesis protein BioC; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=4.6e-09 Score=103.46 Aligned_cols=88 Identities=16% Similarity=0.204 Sum_probs=68.9
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhc
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRL 223 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RV 223 (527)
|.++..|..++..+ ...|.+++|++.|+++.....+.++|.+.+||++++||+|+|+.++ ||..+...+|.|+.|+
T Consensus 54 G~~~~~l~~~~~~v---~~~D~s~~~l~~a~~~~~~~~~~~~d~~~~~~~~~~fD~V~s~~~l-~~~~d~~~~l~~~~~~ 129 (251)
T PRK10258 54 GWMSRYWRERGSQV---TALDLSPPMLAQARQKDAADHYLAGDIESLPLATATFDLAWSNLAV-QWCGNLSTALRELYRV 129 (251)
T ss_pred CHHHHHHHHcCCeE---EEEECCHHHHHHHHhhCCCCCEEEcCcccCcCCCCcEEEEEECchh-hhcCCHHHHHHHHHHH
Confidence 33334445555433 3337889999999988654566778999999999999999999886 6665665699999999
Q ss_pred ccCCcEEEEecC
Q 009719 224 LRPGGYLVISGP 235 (527)
Q Consensus 224 LRPGG~lviS~p 235 (527)
|||||+|++++.
T Consensus 130 Lk~gG~l~~~~~ 141 (251)
T PRK10258 130 VRPGGVVAFTTL 141 (251)
T ss_pred cCCCeEEEEEeC
Confidence 999999999976
|
|
| >PLN02244 tocopherol O-methyltransferase | Back alignment and domain information |
|---|
Probab=98.83 E-value=5.7e-09 Score=108.55 Aligned_cols=71 Identities=20% Similarity=0.233 Sum_probs=60.9
Q ss_pred cChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++.|++.|+++ ++ .+.+.++|+..+||++++||+|+|..+++|+.+... +|.|+.|||||||+|++++.
T Consensus 148 D~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~~~~~~~FD~V~s~~~~~h~~d~~~-~l~e~~rvLkpGG~lvi~~~ 224 (340)
T PLN02244 148 TLSPVQAARANALAAAQGLSDKVSFQVADALNQPFEDGQFDLVWSMESGEHMPDKRK-FVQELARVAAPGGRIIIVTW 224 (340)
T ss_pred ECCHHHHHHHHHHHHhcCCCCceEEEEcCcccCCCCCCCccEEEECCchhccCCHHH-HHHHHHHHcCCCcEEEEEEe
Confidence 6778888877653 44 356788899999999999999999999999987665 99999999999999999764
|
|
| >PRK05785 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.4e-08 Score=99.95 Aligned_cols=73 Identities=21% Similarity=0.241 Sum_probs=58.2
Q ss_pred eeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCc-EEEEecC
Q 009719 159 SFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGG-YLVISGP 235 (527)
Q Consensus 159 siAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG-~lviS~p 235 (527)
.+...|.+++|++.|+++. ...+++++.|||++++||+|+|+.+++|+.+... +|+|+.|||||.+ .+-++.|
T Consensus 76 ~v~gvD~S~~Ml~~a~~~~---~~~~~d~~~lp~~d~sfD~v~~~~~l~~~~d~~~-~l~e~~RvLkp~~~ile~~~p 149 (226)
T PRK05785 76 YVVALDYAENMLKMNLVAD---DKVVGSFEALPFRDKSFDVVMSSFALHASDNIEK-VIAEFTRVSRKQVGFIAMGKP 149 (226)
T ss_pred EEEEECCCHHHHHHHHhcc---ceEEechhhCCCCCCCEEEEEecChhhccCCHHH-HHHHHHHHhcCceEEEEeCCC
Confidence 3445588999999998763 3456899999999999999999999988776665 9999999999954 3334444
|
|
| >PLN02396 hexaprenyldihydroxybenzoate methyltransferase | Back alignment and domain information |
|---|
Probab=98.73 E-value=1e-08 Score=106.55 Aligned_cols=91 Identities=14% Similarity=0.111 Sum_probs=71.3
Q ss_pred hhcccccc----ccCCeeEEeeccCcChHHHHHHHHHcC----C--CcEEeeccccCCCCCCCcccEEEecCcccccccC
Q 009719 143 VASFGGSM----LSENILTLSFAPRDSHKAQIQFALERG----I--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY 212 (527)
Q Consensus 143 vgsfga~L----l~r~V~~msiAp~D~seaqvq~A~eRg----~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~ 212 (527)
+|+.+|.+ ...|.. +...|.++.|+++|+++. . .+.+..++++.||+++++||+|+|..+++|+.+.
T Consensus 138 IGCG~G~~s~~La~~g~~---V~GID~s~~~i~~Ar~~~~~~~~~~~i~~~~~dae~l~~~~~~FD~Vi~~~vLeHv~d~ 214 (322)
T PLN02396 138 IGCGGGLLSEPLARMGAT---VTGVDAVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADEGRKFDAVLSLEVIEHVANP 214 (322)
T ss_pred eeCCCCHHHHHHHHcCCE---EEEEeCCHHHHHHHHHHHHhcCcccceeEEecCHHHhhhccCCCCEEEEhhHHHhcCCH
Confidence 56655543 344543 334488889999998652 1 3456778889999999999999999999999887
Q ss_pred hHHHHHHHhhcccCCcEEEEecCCC
Q 009719 213 NATYLIEVDRLLRPGGYLVISGPPV 237 (527)
Q Consensus 213 ~~~aL~Ei~RVLRPGG~lviS~pp~ 237 (527)
.. +|.|+.|+|||||.+++++...
T Consensus 215 ~~-~L~~l~r~LkPGG~liist~nr 238 (322)
T PLN02396 215 AE-FCKSLSALTIPNGATVLSTINR 238 (322)
T ss_pred HH-HHHHHHHHcCCCcEEEEEECCc
Confidence 66 9999999999999999998643
|
|
| >PRK14103 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.3e-08 Score=98.05 Aligned_cols=72 Identities=22% Similarity=0.252 Sum_probs=58.8
Q ss_pred eccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 160 FAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 160 iAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+...|.++.|++.|+++++ .+.++|++.++ ++++||+|+|+.+++|.++... +|+++.|+|||||+|++..+
T Consensus 56 v~gvD~s~~~~~~a~~~~~--~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~d~~~-~l~~~~~~LkpgG~l~~~~~ 127 (255)
T PRK14103 56 IEALDSSPEMVAAARERGV--DARTGDVRDWK-PKPDTDVVVSNAALQWVPEHAD-LLVRWVDELAPGSWIAVQVP 127 (255)
T ss_pred EEEEECCHHHHHHHHhcCC--cEEEcChhhCC-CCCCceEEEEehhhhhCCCHHH-HHHHHHHhCCCCcEEEEEcC
Confidence 3444778899999988764 46667888885 6789999999999877665544 99999999999999999865
|
|
| >PTZ00098 phosphoethanolamine N-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=7.1e-08 Score=97.00 Aligned_cols=76 Identities=16% Similarity=0.227 Sum_probs=62.5
Q ss_pred eccCcChHHHHHHHHHcCC---CcEEeeccccCCCCCCCcccEEEecCccccccc-ChHHHHHHHhhcccCCcEEEEecC
Q 009719 160 FAPRDSHKAQIQFALERGI---PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA-YNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 160 iAp~D~seaqvq~A~eRg~---pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d-~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+...|.++.|++.|+++.. .+.+..+|...+||++++||+|++..+++|+.. +...+|+|+.|+|||||+|+++.+
T Consensus 78 v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~~~~~~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 78 VHGVDICEKMVNIAKLRNSDKNKIEFEANDILKKDFPENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred EEEEECCHHHHHHHHHHcCcCCceEEEECCcccCCCCCCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 4444778899999988742 255667888899999999999999988889863 344599999999999999999875
|
|
| >KOG4300 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.4e-07 Score=92.87 Aligned_cols=88 Identities=24% Similarity=0.314 Sum_probs=67.7
Q ss_pred eeccCcChHHHHHHHHHc-----CCCc-EEeeccccCCC-CCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEE
Q 009719 159 SFAPRDSHKAQIQFALER-----GIPA-FVAMLGTRRLP-FPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLV 231 (527)
Q Consensus 159 siAp~D~seaqvq~A~eR-----g~pa-~~~v~dae~LP-FpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lv 231 (527)
+++..|.++.|-++|.++ .... .+++++.++|| .+|+|+|+|+|.+||.-..+..+ .|.|+.|+|||||+++
T Consensus 101 svt~lDpn~~mee~~~ks~~E~k~~~~~~fvva~ge~l~~l~d~s~DtVV~TlvLCSve~~~k-~L~e~~rlLRpgG~ii 179 (252)
T KOG4300|consen 101 SVTCLDPNEKMEEIADKSAAEKKPLQVERFVVADGENLPQLADGSYDTVVCTLVLCSVEDPVK-QLNEVRRLLRPGGRII 179 (252)
T ss_pred eEEEeCCcHHHHHHHHHHHhhccCcceEEEEeechhcCcccccCCeeeEEEEEEEeccCCHHH-HHHHHHHhcCCCcEEE
Confidence 444457788888877643 1223 47899999999 89999999999999988776666 9999999999999999
Q ss_pred EecCCCCCCCchhHHHHHH
Q 009719 232 ISGPPVQWPKQDKEWADLQ 250 (527)
Q Consensus 232 iS~pp~~~~~~~~~w~~i~ 250 (527)
+-.+- .+.+..|++|-
T Consensus 180 fiEHv---a~~y~~~n~i~ 195 (252)
T KOG4300|consen 180 FIEHV---AGEYGFWNRIL 195 (252)
T ss_pred EEecc---cccchHHHHHH
Confidence 98762 23455566643
|
|
| >PLN02336 phosphoethanolamine N-methyltransferase | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.6e-07 Score=101.08 Aligned_cols=75 Identities=24% Similarity=0.345 Sum_probs=62.9
Q ss_pred eccCcChHHHHHHHHHcC--C--CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 160 FAPRDSHKAQIQFALERG--I--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 160 iAp~D~seaqvq~A~eRg--~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+...|.++.|++.|+++. . .+.+.++|...+||++++||+|+|..+++|+.+... +|.|+.|+|||||+++++.+
T Consensus 292 v~gvDiS~~~l~~A~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~s~~~l~h~~d~~~-~l~~~~r~LkpgG~l~i~~~ 370 (475)
T PLN02336 292 VVGIDLSVNMISFALERAIGRKCSVEFEVADCTKKTYPDNSFDVIYSRDTILHIQDKPA-LFRSFFKWLKPGGKVLISDY 370 (475)
T ss_pred EEEEECCHHHHHHHHHHhhcCCCceEEEEcCcccCCCCCCCEEEEEECCcccccCCHHH-HHHHHHHHcCCCeEEEEEEe
Confidence 334477889999987652 2 356777898899999999999999999999987665 99999999999999999875
|
|
| >PRK08317 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.3e-07 Score=90.03 Aligned_cols=75 Identities=33% Similarity=0.440 Sum_probs=62.1
Q ss_pred eccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 160 FAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 160 iAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+...|.++.+++.|+++ +....+..+|.+.+|+++++||+|++..+++|+.+... ++.++.++|||||++++..+
T Consensus 47 v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~-~l~~~~~~L~~gG~l~~~~~ 125 (241)
T PRK08317 47 VVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFDAVRSDRVLQHLEDPAR-ALAEIARVLRPGGRVVVLDT 125 (241)
T ss_pred EEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCCCCCCCceEEEEechhhccCCHHH-HHHHHHHHhcCCcEEEEEec
Confidence 33447778888888876 22355667888899999999999999999988887665 99999999999999999876
|
|
| >PRK11088 rrmA 23S rRNA methyltransferase A; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.1e-07 Score=95.61 Aligned_cols=70 Identities=24% Similarity=0.366 Sum_probs=58.6
Q ss_pred eeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCC
Q 009719 159 SFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 159 siAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
.+...|.++.+++.|.++...+.+.++++..|||++++||+|++..+ .. .+.|+.|+|||||+|++..|.
T Consensus 114 ~v~giD~s~~~l~~A~~~~~~~~~~~~d~~~lp~~~~sfD~I~~~~~-------~~-~~~e~~rvLkpgG~li~~~p~ 183 (272)
T PRK11088 114 QLFGLDISKVAIKYAAKRYPQVTFCVASSHRLPFADQSLDAIIRIYA-------PC-KAEELARVVKPGGIVITVTPG 183 (272)
T ss_pred eEEEECCCHHHHHHHHHhCCCCeEEEeecccCCCcCCceeEEEEecC-------CC-CHHHHHhhccCCCEEEEEeCC
Confidence 34555889999999988866677888999999999999999998653 12 578999999999999998873
|
|
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.8e-07 Score=92.00 Aligned_cols=73 Identities=21% Similarity=0.199 Sum_probs=59.7
Q ss_pred cCcChHHHHHHHHHc----CC-CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 162 PRDSHKAQIQFALER----GI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 162 p~D~seaqvq~A~eR----g~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
..|.++.|++.|+++ +. .+.+..++.+.+||++++||+|++..+++|+++... +|.|+.|+|||||+|++++.
T Consensus 107 gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~~~~~~fD~Vi~~~v~~~~~d~~~-~l~~~~r~LkpGG~l~i~~~ 184 (272)
T PRK11873 107 GVDMTPEMLAKARANARKAGYTNVEFRLGEIEALPVADNSVDVIISNCVINLSPDKER-VFKEAFRVLKPGGRFAISDV 184 (272)
T ss_pred EECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCCCCCCceeEEEEcCcccCCCCHHH-HHHHHHHHcCCCcEEEEEEe
Confidence 337788899988864 33 345667889999999999999999988876665555 99999999999999999864
|
|
| >TIGR00740 methyltransferase, putative | Back alignment and domain information |
|---|
Probab=98.46 E-value=3.3e-07 Score=89.94 Aligned_cols=74 Identities=18% Similarity=0.193 Sum_probs=58.4
Q ss_pred eccCcChHHHHHHHHHc----C--CCcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEE
Q 009719 160 FAPRDSHKAQIQFALER----G--IPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 160 iAp~D~seaqvq~A~eR----g--~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lvi 232 (527)
+...|.++.|++.|+++ + ..+.+.++|...+|+++ ||+|+|+.+++|+.+.+ ..+|.++.|+|||||+|++
T Consensus 82 v~gvD~s~~ml~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~--~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpgG~l~i 159 (239)
T TIGR00740 82 IIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEIKN--ASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVL 159 (239)
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCC--CCEEeeecchhhCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 33347788999998765 2 23567788999999874 89999999987776432 3599999999999999999
Q ss_pred ecC
Q 009719 233 SGP 235 (527)
Q Consensus 233 S~p 235 (527)
+.+
T Consensus 160 ~d~ 162 (239)
T TIGR00740 160 SEK 162 (239)
T ss_pred eec
Confidence 976
|
A simple BLAST search finds all members of this family and weaker hits to a large number of known and predicted methyltransferases. A single iteration with PSI-BLAST, keeping only clear members of the family, leads to a large number of highly significant hits to a set of known and predicted methyltransferases with a large repertoire of different specifities. This model is restricted to a subfamily found so far only in the Proteobacteria, sharing consistent length, full-length homology, and on average better than 35 % identity. It is reasonable to predict equivalent function within this subfamily. |
| >PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.7e-07 Score=93.16 Aligned_cols=89 Identities=16% Similarity=0.085 Sum_probs=67.3
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCC-CCCCcccEEEecCcccccccChHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLP-FPAFSFDIVHCSRCLIPFTAYNAT 215 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LP-FpD~SFDlV~cs~~l~hw~d~~~~ 215 (527)
.|.++..|..++..+. ..|.++.|++.|+++ |+. +.+..++++.++ +++++||+|+|..+++|+.+...
T Consensus 55 ~G~~a~~la~~g~~v~---~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~~l~~~~~~~fD~V~~~~vl~~~~~~~~- 130 (255)
T PRK11036 55 EGQTAIKLAELGHQVI---LCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQDIAQHLETPVDLILFHAVLEWVADPKS- 130 (255)
T ss_pred chHHHHHHHHcCCEEE---EEECCHHHHHHHHHHHHhcCCccceEEEEcCHHHHhhhcCCCCCEEEehhHHHhhCCHHH-
Confidence 4445555666665433 348888999988765 332 456677887774 78899999999999877766554
Q ss_pred HHHHHhhcccCCcEEEEecC
Q 009719 216 YLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p 235 (527)
+|.++.|+|||||++++...
T Consensus 131 ~l~~~~~~LkpgG~l~i~~~ 150 (255)
T PRK11036 131 VLQTLWSVLRPGGALSLMFY 150 (255)
T ss_pred HHHHHHHHcCCCeEEEEEEE
Confidence 99999999999999998765
|
|
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=98.45 E-value=1e-07 Score=95.33 Aligned_cols=93 Identities=23% Similarity=0.289 Sum_probs=74.1
Q ss_pred hhcccccc----ccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccChH
Q 009719 143 VASFGGSM----LSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA 214 (527)
Q Consensus 143 vgsfga~L----l~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~ 214 (527)
+|+-||-| ...|. ++...|.++.+|+.|+.+ |+.+......++.|-...++||+|+|..+++|+++...
T Consensus 66 vGCGgG~Lse~mAr~Ga---~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~~edl~~~~~~FDvV~cmEVlEHv~dp~~ 142 (243)
T COG2227 66 VGCGGGILSEPLARLGA---SVTGIDASEKPIEVAKLHALESGVNIDYRQATVEDLASAGGQFDVVTCMEVLEHVPDPES 142 (243)
T ss_pred ecCCccHhhHHHHHCCC---eeEEecCChHHHHHHHHhhhhccccccchhhhHHHHHhcCCCccEEEEhhHHHccCCHHH
Confidence 66655544 33464 455558899999988744 55555666778888887899999999999999998887
Q ss_pred HHHHHHhhcccCCcEEEEecCCCCC
Q 009719 215 TYLIEVDRLLRPGGYLVISGPPVQW 239 (527)
Q Consensus 215 ~aL~Ei~RVLRPGG~lviS~pp~~~ 239 (527)
+++++.+.|||||.+++|++..++
T Consensus 143 -~~~~c~~lvkP~G~lf~STinrt~ 166 (243)
T COG2227 143 -FLRACAKLVKPGGILFLSTINRTL 166 (243)
T ss_pred -HHHHHHHHcCCCcEEEEeccccCH
Confidence 999999999999999999986554
|
|
| >PF13489 Methyltransf_23: Methyltransferase domain; PDB: 3JWJ_A 3JWH_B 2AOV_B 2AOT_A 1JQD_B 2AOX_A 1JQE_A 2AOU_B 2AOW_A 3DLI_C | Back alignment and domain information |
|---|
Probab=98.44 E-value=9.2e-08 Score=85.98 Aligned_cols=86 Identities=30% Similarity=0.493 Sum_probs=63.4
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDR 222 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~R 222 (527)
.|.++..|...+. .+...|.++.+++. ........+....++++++||+|+|..+++|..+... +|.++.|
T Consensus 33 ~G~~~~~l~~~~~---~~~g~D~~~~~~~~-----~~~~~~~~~~~~~~~~~~~fD~i~~~~~l~~~~d~~~-~l~~l~~ 103 (161)
T PF13489_consen 33 TGSFLRALAKRGF---EVTGVDISPQMIEK-----RNVVFDNFDAQDPPFPDGSFDLIICNDVLEHLPDPEE-FLKELSR 103 (161)
T ss_dssp TSHHHHHHHHTTS---EEEEEESSHHHHHH-----TTSEEEEEECHTHHCHSSSEEEEEEESSGGGSSHHHH-HHHHHHH
T ss_pred CCHHHHHHHHhCC---EEEEEECCHHHHhh-----hhhhhhhhhhhhhhccccchhhHhhHHHHhhcccHHH-HHHHHHH
Confidence 4555556666666 34444777777766 2223333444567788999999999999999886555 9999999
Q ss_pred cccCCcEEEEecCCC
Q 009719 223 LLRPGGYLVISGPPV 237 (527)
Q Consensus 223 VLRPGG~lviS~pp~ 237 (527)
+|||||+++++.+..
T Consensus 104 ~LkpgG~l~~~~~~~ 118 (161)
T PF13489_consen 104 LLKPGGYLVISDPNR 118 (161)
T ss_dssp CEEEEEEEEEEEEBT
T ss_pred hcCCCCEEEEEEcCC
Confidence 999999999999843
|
... |
| >PRK01683 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=4.7e-07 Score=89.50 Aligned_cols=73 Identities=21% Similarity=0.208 Sum_probs=58.4
Q ss_pred ccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 161 APRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 161 Ap~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
...|.++.|++.|+++...+.+..+|.+.++ ++++||+|+|+.+++|..+. ..+|.++.|+|||||+|+++.+
T Consensus 59 ~gvD~s~~~i~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~d~-~~~l~~~~~~LkpgG~~~~~~~ 131 (258)
T PRK01683 59 TGIDSSPAMLAEARSRLPDCQFVEADIASWQ-PPQALDLIFANASLQWLPDH-LELFPRLVSLLAPGGVLAVQMP 131 (258)
T ss_pred EEEECCHHHHHHHHHhCCCCeEEECchhccC-CCCCccEEEEccChhhCCCH-HHHHHHHHHhcCCCcEEEEECC
Confidence 3337788999999887545667778887765 56799999999998655554 4599999999999999999875
|
|
| >TIGR02072 BioC biotin biosynthesis protein BioC | Back alignment and domain information |
|---|
Probab=98.40 E-value=3.1e-07 Score=87.82 Aligned_cols=90 Identities=21% Similarity=0.230 Sum_probs=67.0
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcCCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhh
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDR 222 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~R 222 (527)
|.++.+|...+.. ..+...|.++.+++.|.++..+ ..+..+|.+.+|+++++||+|+|+.+++|..+.. .+|.++.|
T Consensus 46 G~~~~~l~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~vi~~~~l~~~~~~~-~~l~~~~~ 123 (240)
T TIGR02072 46 GYLTRALLKRFPQ-AEFIALDISAGMLAQAKTKLSENVQFICGDAEKLPLEDSSFDLIVSNLALQWCDDLS-QALSELAR 123 (240)
T ss_pred cHHHHHHHHhCCC-CcEEEEeChHHHHHHHHHhcCCCCeEEecchhhCCCCCCceeEEEEhhhhhhccCHH-HHHHHHHH
Confidence 3344445444321 1234447788899888877533 4567788899999999999999999986655544 49999999
Q ss_pred cccCCcEEEEecC
Q 009719 223 LLRPGGYLVISGP 235 (527)
Q Consensus 223 VLRPGG~lviS~p 235 (527)
+|||||+++++.+
T Consensus 124 ~L~~~G~l~~~~~ 136 (240)
T TIGR02072 124 VLKPGGLLAFSTF 136 (240)
T ss_pred HcCCCcEEEEEeC
Confidence 9999999999876
|
This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, is believed to carry out an enzymatic step prior to the formation of pimeloyl-CoA (although attribution of this annotation is not traceable). The enzyme appears related to methyltransferases by homology. |
| >PLN02490 MPBQ/MSBQ methyltransferase | Back alignment and domain information |
|---|
Probab=98.40 E-value=3.9e-07 Score=95.65 Aligned_cols=75 Identities=20% Similarity=0.200 Sum_probs=62.6
Q ss_pred eccCcChHHHHHHHHHcC--CCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 160 FAPRDSHKAQIQFALERG--IPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 160 iAp~D~seaqvq~A~eRg--~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+...|.++.|++.|+++. ....+..+|.+.+||++++||+|+++.+++||.+... +|+|+.|+|||||++++.++
T Consensus 140 VtgVD~S~~mL~~A~~k~~~~~i~~i~gD~e~lp~~~~sFDvVIs~~~L~~~~d~~~-~L~e~~rvLkPGG~LvIi~~ 216 (340)
T PLN02490 140 VTILDQSPHQLAKAKQKEPLKECKIIEGDAEDLPFPTDYADRYVSAGSIEYWPDPQR-GIKEAYRVLKIGGKACLIGP 216 (340)
T ss_pred EEEEECCHHHHHHHHHhhhccCCeEEeccHHhCCCCCCceeEEEEcChhhhCCCHHH-HHHHHHHhcCCCcEEEEEEe
Confidence 334477889999998763 1345677899999999999999999999988887765 99999999999999998765
|
|
| >TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.6e-07 Score=89.59 Aligned_cols=71 Identities=25% Similarity=0.343 Sum_probs=58.1
Q ss_pred cChHHHHHHHHHc----CC-CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++.|++.|+++ +. ...+..+|++.+||++++||+|++..+++|+.+... +|.|+.|+|||||++++..+
T Consensus 77 D~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~-~l~~~~~~Lk~gG~l~~~~~ 152 (231)
T TIGR02752 77 DFSENMLSVGRQKVKDAGLHNVELVHGNAMELPFDDNSFDYVTIGFGLRNVPDYMQ-VLREMYRVVKPGGKVVCLET 152 (231)
T ss_pred ECCHHHHHHHHHHHHhcCCCceEEEEechhcCCCCCCCccEEEEecccccCCCHHH-HHHHHHHHcCcCeEEEEEEC
Confidence 6677888888754 23 245677888899999999999999998877766655 99999999999999998664
|
MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species. |
| >PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.7e-07 Score=78.74 Aligned_cols=70 Identities=30% Similarity=0.420 Sum_probs=57.0
Q ss_pred eeccCcChHHHHHHHHHcC----CCcEEeeccccCCCCCCCcccEEEecCc-ccccccCh-HHHHHHHhhcccCCc
Q 009719 159 SFAPRDSHKAQIQFALERG----IPAFVAMLGTRRLPFPAFSFDIVHCSRC-LIPFTAYN-ATYLIEVDRLLRPGG 228 (527)
Q Consensus 159 siAp~D~seaqvq~A~eRg----~pa~~~v~dae~LPFpD~SFDlV~cs~~-l~hw~d~~-~~aL~Ei~RVLRPGG 228 (527)
.+...|.+++|++.|+++. .++.+.++|.+.||+.+++||+|+|+.+ ++|+.+.. ..+|.++.++|||||
T Consensus 26 ~~~gvD~s~~~l~~~~~~~~~~~~~~~~~~~D~~~l~~~~~~~D~v~~~~~~~~~~~~~~~~~ll~~~~~~l~pgG 101 (101)
T PF13649_consen 26 RVIGVDISPEMLELAKKRFSEDGPKVRFVQADARDLPFSDGKFDLVVCSGLSLHHLSPEELEALLRRIARLLRPGG 101 (101)
T ss_dssp EEEEEES-HHHHHHHHHHSHHTTTTSEEEESCTTCHHHHSSSEEEEEE-TTGGGGSSHHHHHHHHHHHHHTEEEEE
T ss_pred eEEEEECCHHHHHHHHHhchhcCCceEEEECCHhHCcccCCCeeEEEEcCCccCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3444588999999998774 6788999999999999999999999665 77766544 359999999999998
|
|
| >smart00138 MeTrc Methyltransferase, chemotaxis proteins | Back alignment and domain information |
|---|
Probab=98.32 E-value=8.7e-07 Score=89.47 Aligned_cols=78 Identities=22% Similarity=0.293 Sum_probs=63.2
Q ss_pred EeeccCcChHHHHHHHHHcC--------C------------------------CcEEeeccccCCCCCCCcccEEEecCc
Q 009719 158 LSFAPRDSHKAQIQFALERG--------I------------------------PAFVAMLGTRRLPFPAFSFDIVHCSRC 205 (527)
Q Consensus 158 msiAp~D~seaqvq~A~eRg--------~------------------------pa~~~v~dae~LPFpD~SFDlV~cs~~ 205 (527)
..|...|+++.|++.|++.- + .+.+.++|...+|+++++||+|+|..+
T Consensus 133 ~~I~g~Dis~~~L~~Ar~~~y~~~~~~~~~~~~~~~yf~~~~~~~~v~~~ir~~V~F~~~dl~~~~~~~~~fD~I~crnv 212 (264)
T smart00138 133 VKILATDIDLKALEKARAGIYPERELEDLPKALLARYFSRVEDKYRVKPELKERVRFAKHNLLAESPPLGDFDLIFCRNV 212 (264)
T ss_pred eEEEEEECCHHHHHHHHcCCCCHHHHhcCCHHHHhhhEEeCCCeEEEChHHhCcCEEeeccCCCCCCccCCCCEEEechh
Confidence 45666699999999998631 1 245667888888989999999999999
Q ss_pred ccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 206 LIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 206 l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
++|+.+.. ..++.++.|+|||||+|++...
T Consensus 213 l~yf~~~~~~~~l~~l~~~L~pGG~L~lg~~ 243 (264)
T smart00138 213 LIYFDEPTQRKLLNRFAEALKPGGYLFLGHS 243 (264)
T ss_pred HHhCCHHHHHHHHHHHHHHhCCCeEEEEECc
Confidence 99986544 3599999999999999999654
|
Methylates methyl-accepting chemotaxis proteins to form gamma-glutamyl methyl ester residues. |
| >PRK15068 tRNA mo(5)U34 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=9.7e-07 Score=91.63 Aligned_cols=70 Identities=24% Similarity=0.233 Sum_probs=54.7
Q ss_pred cChHHHHHHHH--Hc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFAL--ER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~--eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++.++..+. ++ ...+.+..++.+.+|+ +++||+|+|..+++|..+... +|+++.|+|||||.|++++.
T Consensus 152 D~S~~~l~q~~a~~~~~~~~~~i~~~~~d~e~lp~-~~~FD~V~s~~vl~H~~dp~~-~L~~l~~~LkpGG~lvl~~~ 227 (322)
T PRK15068 152 DPSQLFLCQFEAVRKLLGNDQRAHLLPLGIEQLPA-LKAFDTVFSMGVLYHRRSPLD-HLKQLKDQLVPGGELVLETL 227 (322)
T ss_pred cCCHHHHHHHHHHHHhcCCCCCeEEEeCCHHHCCC-cCCcCEEEECChhhccCCHHH-HHHHHHHhcCCCcEEEEEEE
Confidence 56666664332 22 1245677788999999 899999999999988876655 99999999999999999753
|
|
| >TIGR00477 tehB tellurite resistance protein TehB | Back alignment and domain information |
|---|
Probab=98.29 E-value=3.2e-06 Score=81.22 Aligned_cols=126 Identities=13% Similarity=0.155 Sum_probs=76.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHH----cCCCcEEeeccccCCCCCCCcccEEEecCcccccccC-hHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALE----RGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY-NATYL 217 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~e----Rg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~-~~~aL 217 (527)
.|.++.+|..++..+ ...|.++.+++.|++ .+++....+++...++++ ++||+|+|+.+++|+... ...++
T Consensus 41 ~G~~a~~la~~g~~V---~~iD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~I~~~~~~~~~~~~~~~~~l 116 (195)
T TIGR00477 41 QGRNSLYLSLAGYDV---RAWDHNPASIASVLDMKARENLPLRTDAYDINAAALN-EDYDFIFSTVVFMFLQAGRVPEII 116 (195)
T ss_pred CCHHHHHHHHCCCeE---EEEECCHHHHHHHHHHHHHhCCCceeEeccchhcccc-CCCCEEEEecccccCCHHHHHHHH
Confidence 455555666666433 334778888887654 356655666677667775 689999999998777543 23599
Q ss_pred HHHhhcccCCcEEEEec-C-CCCCC----Cc-hhHHHHHHHHHHhcceEEeeeecceEEEeCCC
Q 009719 218 IEVDRLLRPGGYLVISG-P-PVQWP----KQ-DKEWADLQAVARALCYELIAVDGNTVIWKKPV 274 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~-p-p~~~~----~~-~~~w~~i~~l~~~mcW~~~~~~~~v~iwrKp~ 274 (527)
.++.|+|||||++++-. . ....+ .+ ....+.+.++.+. |+.+.-...+.-+.+..
T Consensus 117 ~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~~~~~~~el~~~f~~--~~~~~~~e~~~~~~~~~ 178 (195)
T TIGR00477 117 ANMQAHTRPGGYNLIVAAMDTADYPCHMPFSFTFKEDELRQYYAD--WELLKYNEAVGELHATD 178 (195)
T ss_pred HHHHHHhCCCcEEEEEEecccCCCCCCCCcCccCCHHHHHHHhCC--CeEEEeecccccccccc
Confidence 99999999999965531 1 00000 01 1123344444432 77666655555555543
|
Part of a tellurite-reducing operon tehA and tehB |
| >PRK11207 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.6e-06 Score=83.44 Aligned_cols=86 Identities=16% Similarity=0.231 Sum_probs=61.8
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccC-hHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY-NATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~-~~~a 216 (527)
.|.++.+|.+++..+..+ |.++.+++.|+++ ++. +.+.++|...++++ ++||+|+|+.+++|+... ...+
T Consensus 41 ~G~~a~~La~~g~~V~gv---D~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~I~~~~~~~~~~~~~~~~~ 116 (197)
T PRK11207 41 NGRNSLYLAANGFDVTAW---DKNPMSIANLERIKAAENLDNLHTAVVDLNNLTFD-GEYDFILSTVVLMFLEAKTIPGL 116 (197)
T ss_pred CCHHHHHHHHCCCEEEEE---eCCHHHHHHHHHHHHHcCCCcceEEecChhhCCcC-CCcCEEEEecchhhCCHHHHHHH
Confidence 455666677776544344 7788888877643 443 45566777778885 679999999988665532 2359
Q ss_pred HHHHhhcccCCcEEEE
Q 009719 217 LIEVDRLLRPGGYLVI 232 (527)
Q Consensus 217 L~Ei~RVLRPGG~lvi 232 (527)
+.++.|+|||||++++
T Consensus 117 l~~i~~~LkpgG~~~~ 132 (197)
T PRK11207 117 IANMQRCTKPGGYNLI 132 (197)
T ss_pred HHHHHHHcCCCcEEEE
Confidence 9999999999999654
|
|
| >PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.3e-07 Score=77.27 Aligned_cols=91 Identities=20% Similarity=0.245 Sum_probs=58.3
Q ss_pred eecCCCccchhhhccCC-CeeEEEecCCCCCCchhHhhhccccc---cccccCCCCCCCCCccchhhhcCccccccCCCC
Q 009719 378 MDMNAFFGGFAAALTSD-PVWVMNVVPARKSSTLSVIYDRGLIG---VYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGS 453 (527)
Q Consensus 378 mDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~ntl~vi~eRGLiG---~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~ 453 (527)
||+|||.|-+++.|.+. +.=|..+-+.. ..++.+-++.--. ..+.=-+.++.-+.+||+|++..+|..+.
T Consensus 1 LdiG~G~G~~~~~l~~~~~~~v~~~D~~~--~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~sfD~v~~~~~~~~~~---- 74 (95)
T PF08241_consen 1 LDIGCGTGRFAAALAKRGGASVTGIDISE--EMLEQARKRLKNEGVSFRQGDAEDLPFPDNSFDVVFSNSVLHHLE---- 74 (95)
T ss_dssp EEET-TTSHHHHHHHHTTTCEEEEEES-H--HHHHHHHHHTTTSTEEEEESBTTSSSS-TT-EEEEEEESHGGGSS----
T ss_pred CEecCcCCHHHHHHHhccCCEEEEEeCCH--HHHHHHHhcccccCchheeehHHhCccccccccccccccceeecc----
Confidence 79999999999999887 54444333332 3344444433211 22111233332349999999999988652
Q ss_pred CCCCCcccccceeecccccCCcEEEE
Q 009719 454 NKNSCSLVDLMVEMDRMLRPEGTVVV 479 (527)
Q Consensus 454 ~~~rC~~~~illEmDRILRP~G~~ii 479 (527)
+...++-|+-|+|||||+++|
T Consensus 75 -----~~~~~l~e~~rvLk~gG~l~~ 95 (95)
T PF08241_consen 75 -----DPEAALREIYRVLKPGGRLVI 95 (95)
T ss_dssp -----HHHHHHHHHHHHEEEEEEEEE
T ss_pred -----CHHHHHHHHHHHcCcCeEEeC
Confidence 357899999999999999986
|
The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B .... |
| >smart00828 PKS_MT Methyltransferase in polyketide synthase (PKS) enzymes | Back alignment and domain information |
|---|
Probab=98.16 E-value=2.5e-06 Score=82.37 Aligned_cols=72 Identities=21% Similarity=0.307 Sum_probs=57.2
Q ss_pred cCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 162 PRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 162 p~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
..|.++.|++.|+++ |.. ..+...|....|++ ++||+|++..+++|+.+... +|.++.|+|||||+++++.+
T Consensus 28 gid~s~~~~~~a~~~~~~~gl~~~i~~~~~d~~~~~~~-~~fD~I~~~~~l~~~~~~~~-~l~~~~~~LkpgG~l~i~~~ 105 (224)
T smart00828 28 GYTISPEQAEVGRERIRALGLQGRIRIFYRDSAKDPFP-DTYDLVFGFEVIHHIKDKMD-LFSNISRHLKDGGHLVLADF 105 (224)
T ss_pred EEECCHHHHHHHHHHHHhcCCCcceEEEecccccCCCC-CCCCEeehHHHHHhCCCHHH-HHHHHHHHcCCCCEEEEEEc
Confidence 336688888888765 332 35666777677886 48999999999998877555 99999999999999999875
|
|
| >TIGR00452 methyltransferase, putative | Back alignment and domain information |
|---|
Probab=98.12 E-value=4e-06 Score=87.19 Aligned_cols=88 Identities=19% Similarity=0.118 Sum_probs=61.8
Q ss_pred hhcccccc----ccCCee-EEeeccCcChHHHHHHHH---Hc-C--CCcEEeeccccCCCCCCCcccEEEecCccccccc
Q 009719 143 VASFGGSM----LSENIL-TLSFAPRDSHKAQIQFAL---ER-G--IPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA 211 (527)
Q Consensus 143 vgsfga~L----l~r~V~-~msiAp~D~seaqvq~A~---eR-g--~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d 211 (527)
+|+..|++ +..+.. ++.+ |.++.|++.+. +. + ..+.+..++.+.+|+. ++||+|+|..+++|+.+
T Consensus 128 vGCG~G~~~~~~~~~g~~~v~Gi---DpS~~ml~q~~~~~~~~~~~~~v~~~~~~ie~lp~~-~~FD~V~s~gvL~H~~d 203 (314)
T TIGR00452 128 VGCGSGYHMWRMLGHGAKSLVGI---DPTVLFLCQFEAVRKLLDNDKRAILEPLGIEQLHEL-YAFDTVFSMGVLYHRKS 203 (314)
T ss_pred eccCCcHHHHHHHHcCCCEEEEE---cCCHHHHHHHHHHHHHhccCCCeEEEECCHHHCCCC-CCcCEEEEcchhhccCC
Confidence 56655554 344542 3344 66666665432 21 1 2345566788889875 48999999999999877
Q ss_pred ChHHHHHHHhhcccCCcEEEEecC
Q 009719 212 YNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 212 ~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
... +|+|+.|+|||||.|++++.
T Consensus 204 p~~-~L~el~r~LkpGG~Lvletl 226 (314)
T TIGR00452 204 PLE-HLKQLKHQLVIKGELVLETL 226 (314)
T ss_pred HHH-HHHHHHHhcCCCCEEEEEEE
Confidence 665 99999999999999999754
|
Known examples to date are restricted to the proteobacteria. |
| >PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=4.1e-06 Score=83.22 Aligned_cols=74 Identities=22% Similarity=0.187 Sum_probs=58.5
Q ss_pred eccCcChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEE
Q 009719 160 FAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 160 iAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lvi 232 (527)
+...|.++.|++.|+++ +. ...+.++++..+|+++ ||+|+|+.+++|+.+.. ..++.|+.|+|||||.|++
T Consensus 85 v~gvD~S~~ml~~A~~~~~~~~~~~~v~~~~~d~~~~~~~~--~D~vv~~~~l~~l~~~~~~~~l~~i~~~LkpGG~l~l 162 (247)
T PRK15451 85 IIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIEN--ASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVL 162 (247)
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCCCCeEEEeCChhhCCCCC--CCEEehhhHHHhCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 33347888999999876 23 3566778888888864 99999999988876543 3599999999999999999
Q ss_pred ecC
Q 009719 233 SGP 235 (527)
Q Consensus 233 S~p 235 (527)
+..
T Consensus 163 ~e~ 165 (247)
T PRK15451 163 SEK 165 (247)
T ss_pred EEe
Confidence 874
|
|
| >PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A | Back alignment and domain information |
|---|
Probab=98.10 E-value=4.7e-06 Score=71.24 Aligned_cols=89 Identities=24% Similarity=0.255 Sum_probs=61.6
Q ss_pred hhcccccccc--CCeeEEeeccCcChHHHHHHHHHcC------CCcEEeeccc-cCCCCCCCcccEEEecC-ccccccc-
Q 009719 143 VASFGGSMLS--ENILTLSFAPRDSHKAQIQFALERG------IPAFVAMLGT-RRLPFPAFSFDIVHCSR-CLIPFTA- 211 (527)
Q Consensus 143 vgsfga~Ll~--r~V~~msiAp~D~seaqvq~A~eRg------~pa~~~v~da-e~LPFpD~SFDlV~cs~-~l~hw~d- 211 (527)
.|.++.+|.. .+..+..+ |.++.+++.|+++. ....+..+|. ....+. ..||+|+|.. +++++..
T Consensus 12 ~G~~~~~l~~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~~D~v~~~~~~~~~~~~~ 87 (112)
T PF12847_consen 12 TGRLSIALARLFPGARVVGV---DISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFL-EPFDLVICSGFTLHFLLPL 87 (112)
T ss_dssp TSHHHHHHHHHHTTSEEEEE---ESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTS-SCEEEEEECSGSGGGCCHH
T ss_pred CCHHHHHHHhcCCCCEEEEE---eCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccC-CCCCEEEECCCccccccch
Confidence 3455555666 56654455 77888998888663 2356777787 344444 4599999998 5554443
Q ss_pred -ChHHHHHHHhhcccCCcEEEEecC
Q 009719 212 -YNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 212 -~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
....+|.++.+.|||||+|+++++
T Consensus 88 ~~~~~~l~~~~~~L~pgG~lvi~~~ 112 (112)
T PF12847_consen 88 DERRRVLERIRRLLKPGGRLVINTC 112 (112)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEE-
T ss_pred hHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 234589999999999999999864
|
... |
| >PF08242 Methyltransf_12: Methyltransferase domain; InterPro: IPR013217 Methyl transfer from the ubiquitous donor S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=98.09 E-value=6.8e-07 Score=75.54 Aligned_cols=85 Identities=27% Similarity=0.282 Sum_probs=41.1
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CC-CcEEeeccccCCC--CCCCcccEEEecCcccccccChHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI-PAFVAMLGTRRLP--FPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~-pa~~~v~dae~LP--FpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
|.+..+|++.. ....+...|.|+.|++.|++| +. ...........+. .+.++||+|+++.+++|+.+. ..+
T Consensus 8 G~~~~~l~~~~-~~~~~~~~D~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~vl~~l~~~-~~~ 85 (99)
T PF08242_consen 8 GRLLRALLEEL-PDARYTGVDISPSMLERARERLAELGNDNFERLRFDVLDLFDYDPPESFDLVVASNVLHHLEDI-EAV 85 (99)
T ss_dssp S-TTTTHHHHC--EEEEEEEESSSSTTSTTCCCHHHCT---EEEEE--SSS---CCC----SEEEEE-TTS--S-H-HHH
T ss_pred hHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHhhhcCCcceeEEEeecCChhhcccccccceehhhhhHhhhhhH-HHH
Confidence 44455555542 222333446666677555544 21 1222222322221 223699999999999888444 459
Q ss_pred HHHHhhcccCCcEE
Q 009719 217 LIEVDRLLRPGGYL 230 (527)
Q Consensus 217 L~Ei~RVLRPGG~l 230 (527)
|+.+.++|||||.|
T Consensus 86 l~~~~~~L~pgG~l 99 (99)
T PF08242_consen 86 LRNIYRLLKPGGIL 99 (99)
T ss_dssp HHHHTTT-TSS-EE
T ss_pred HHHHHHHcCCCCCC
Confidence 99999999999986
|
The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] Fatty acid synthase (2.3.1.85 from EC), a biosynthetic enzyme catalysing the formation of long-chain fatty acids Glycine N-methyltransferase (2.1.1.20 from EC) which catalyses the SAM-dependent methylation of glycine to form sarcosine and may play a role in regulating the methylation potential of the cell [] Enniatin synthetase, involved in non-ribosomal biosynthesis of cyclohexadepsipeptidase, enniatin [] Histamine N-methyltransferase (2.1.1.8 from EC), a SAM-dependent histamine-inactivating enzyme [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ].; PDB: 2VZ8_A 2VZ9_A. |
| >PRK06922 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=2.5e-06 Score=95.94 Aligned_cols=77 Identities=21% Similarity=0.164 Sum_probs=60.6
Q ss_pred eeccCcChHHHHHHHHHc----CCCcEEeeccccCCC--CCCCcccEEEecCccccccc------------ChHHHHHHH
Q 009719 159 SFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLP--FPAFSFDIVHCSRCLIPFTA------------YNATYLIEV 220 (527)
Q Consensus 159 siAp~D~seaqvq~A~eR----g~pa~~~v~dae~LP--FpD~SFDlV~cs~~l~hw~d------------~~~~aL~Ei 220 (527)
.+...|.++.|++.|+++ +....+..+|+..|| |++++||+|+++.+++||.+ +...+|+|+
T Consensus 444 kVtGIDIS~~MLe~Ararl~~~g~~ie~I~gDa~dLp~~fedeSFDvVVsn~vLH~L~syIp~~g~~f~~edl~kiLreI 523 (677)
T PRK06922 444 RIYGIDISENVIDTLKKKKQNEGRSWNVIKGDAINLSSSFEKESVDTIVYSSILHELFSYIEYEGKKFNHEVIKKGLQSA 523 (677)
T ss_pred EEEEEECCHHHHHHHHHHhhhcCCCeEEEEcchHhCccccCCCCEEEEEEchHHHhhhhhcccccccccHHHHHHHHHHH
Confidence 344448888999988765 334556678888898 89999999999998877632 224599999
Q ss_pred hhcccCCcEEEEecC
Q 009719 221 DRLLRPGGYLVISGP 235 (527)
Q Consensus 221 ~RVLRPGG~lviS~p 235 (527)
.|+|||||++++...
T Consensus 524 ~RVLKPGGrLII~D~ 538 (677)
T PRK06922 524 YEVLKPGGRIIIRDG 538 (677)
T ss_pred HHHcCCCcEEEEEeC
Confidence 999999999999864
|
|
| >TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases | Back alignment and domain information |
|---|
Probab=98.05 E-value=6e-06 Score=78.44 Aligned_cols=74 Identities=28% Similarity=0.287 Sum_probs=59.4
Q ss_pred ccCcChHHHHHHHHHcCC---CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 161 APRDSHKAQIQFALERGI---PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 161 Ap~D~seaqvq~A~eRg~---pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
...|.++.+++.+.++.. ...+..++...+|+++++||+|+++..++|..+... +|+++.++|||||++++...
T Consensus 68 ~~iD~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~~~-~l~~~~~~L~~gG~l~~~~~ 144 (223)
T TIGR01934 68 TGVDFSSEMLEVAKKKSELPLNIEFIQADAEALPFEDNSFDAVTIAFGLRNVTDIQK-ALREMYRVLKPGGRLVILEF 144 (223)
T ss_pred EEEECCHHHHHHHHHHhccCCCceEEecchhcCCCCCCcEEEEEEeeeeCCcccHHH-HHHHHHHHcCCCcEEEEEEe
Confidence 333667788888877642 355667888889999999999999999877776555 99999999999999998664
|
Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases. |
| >TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase | Back alignment and domain information |
|---|
Probab=98.04 E-value=8.1e-06 Score=79.51 Aligned_cols=73 Identities=18% Similarity=0.093 Sum_probs=58.5
Q ss_pred eeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccC-hHHHHHHHhhcccCCcEEEEec
Q 009719 159 SFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY-NATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 159 siAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~-~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
.+...|.++.+++.|+++.....+.++++.. ||++++||+|+|..+++|+... ...+++|+.|++ +++++++.
T Consensus 69 ~v~giDiS~~~l~~A~~~~~~~~~~~~d~~~-~~~~~sfD~V~~~~vL~hl~p~~~~~~l~el~r~~--~~~v~i~e 142 (204)
T TIGR03587 69 HIYGVEINEYAVEKAKAYLPNINIIQGSLFD-PFKDNFFDLVLTKGVLIHINPDNLPTAYRELYRCS--NRYILIAE 142 (204)
T ss_pred eEEEEECCHHHHHHHHhhCCCCcEEEeeccC-CCCCCCEEEEEECChhhhCCHHHHHHHHHHHHhhc--CcEEEEEE
Confidence 4555588999999998865445666778777 9999999999999999998633 245999999998 67888865
|
Members of this small clade are methyltransferases of the pfam08241 family and are observed within operons for the biosynthesis of pseudaminic acid, a component of exopolysaccharide and flagellin glycosyl modifications. Notable among these genomes is Pseudomonas fluorescens PfO-1. Possibly one of the two hydroxyl groups of pseudaminic acid, at positions 4 and 8 is converted to a methoxy group by this enzyme |
| >PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A | Back alignment and domain information |
|---|
Probab=98.03 E-value=6.4e-06 Score=75.28 Aligned_cols=71 Identities=32% Similarity=0.488 Sum_probs=60.4
Q ss_pred CcChHHHHHHHHHc----CCC-cEEeeccccCCC--CCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 163 RDSHKAQIQFALER----GIP-AFVAMLGTRRLP--FPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 163 ~D~seaqvq~A~eR----g~p-a~~~v~dae~LP--FpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.|.++.|++.|+++ +.+ ..+.++|...++ |+ +.||+|++..+++|+.+... +|.++.|+|+|||.++++.+
T Consensus 34 vD~s~~~i~~a~~~~~~~~~~ni~~~~~d~~~l~~~~~-~~~D~I~~~~~l~~~~~~~~-~l~~~~~~lk~~G~~i~~~~ 111 (152)
T PF13847_consen 34 VDISEEMIEYAKKRAKELGLDNIEFIQGDIEDLPQELE-EKFDIIISNGVLHHFPDPEK-VLKNIIRLLKPGGILIISDP 111 (152)
T ss_dssp EESSHHHHHHHHHHHHHTTSTTEEEEESBTTCGCGCSS-TTEEEEEEESTGGGTSHHHH-HHHHHHHHEEEEEEEEEEEE
T ss_pred EECcHHHHHHhhcccccccccccceEEeehhccccccC-CCeeEEEEcCchhhccCHHH-HHHHHHHHcCCCcEEEEEEC
Confidence 38889999999873 565 678889988888 88 99999999998877665555 99999999999999999876
|
... |
| >PRK12335 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=8.8e-06 Score=82.67 Aligned_cols=86 Identities=10% Similarity=0.122 Sum_probs=61.1
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHH----cCCCcEEeeccccCCCCCCCcccEEEecCcccccccC-hHHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALE----RGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY-NATYLI 218 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~e----Rg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~-~~~aL~ 218 (527)
|..+.+|..+|..+. ..|.++.+++.|++ .++...+...|....++ +++||+|+|..+++|.... ...++.
T Consensus 132 G~~~~~la~~g~~V~---avD~s~~ai~~~~~~~~~~~l~v~~~~~D~~~~~~-~~~fD~I~~~~vl~~l~~~~~~~~l~ 207 (287)
T PRK12335 132 GRNSLYLALLGFDVT---AVDINQQSLENLQEIAEKENLNIRTGLYDINSASI-QEEYDFILSTVVLMFLNRERIPAIIK 207 (287)
T ss_pred CHHHHHHHHCCCEEE---EEECCHHHHHHHHHHHHHcCCceEEEEechhcccc-cCCccEEEEcchhhhCCHHHHHHHHH
Confidence 344445666665433 34788888887754 35655666677766666 7899999999988776532 235999
Q ss_pred HHhhcccCCcEEEEe
Q 009719 219 EVDRLLRPGGYLVIS 233 (527)
Q Consensus 219 Ei~RVLRPGG~lviS 233 (527)
++.|+|||||++++.
T Consensus 208 ~~~~~LkpgG~~l~v 222 (287)
T PRK12335 208 NMQEHTNPGGYNLIV 222 (287)
T ss_pred HHHHhcCCCcEEEEE
Confidence 999999999997663
|
|
| >PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed | Back alignment and domain information |
|---|
Probab=97.99 E-value=2.7e-05 Score=75.22 Aligned_cols=151 Identities=18% Similarity=0.278 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccC--CCeeEEEecCCCCCCch----hHhhhccc--ccccc
Q 009719 352 RRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTS--DPVWVMNVVPARKSSTL----SVIYDRGL--IGVYH 423 (527)
Q Consensus 352 ~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~--~~VwvMnvvp~~~~ntl----~vi~eRGL--iG~~h 423 (527)
+.|++++-.=.. +.+.+..+ ..|+|+|||.|.++.++.. ...-|.-+=+.. .-+ +.+-+.|+ +-+++
T Consensus 27 ~~~~~~~~d~l~-l~~~l~~g--~~VLDiGcGtG~~al~la~~~~~~~V~giD~s~--~~l~~A~~~~~~~~l~~i~~~~ 101 (187)
T PRK00107 27 ELWERHILDSLA-IAPYLPGG--ERVLDVGSGAGFPGIPLAIARPELKVTLVDSLG--KKIAFLREVAAELGLKNVTVVH 101 (187)
T ss_pred HHHHHHHHHHHH-HHhhcCCC--CeEEEEcCCCCHHHHHHHHHCCCCeEEEEeCcH--HHHHHHHHHHHHcCCCCEEEEe
Confidence 388888744232 12233332 4799999999988776642 223233332221 211 22333444 33343
Q ss_pred ccCCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCceeEEe
Q 009719 424 DWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 424 dwce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~~~~ 503 (527)
.-.+.+.. ..+||+|-+.. + ..+.+++-++-|+|||||.+++-+.......++.+++.+-|.+...
T Consensus 102 ~d~~~~~~-~~~fDlV~~~~-~------------~~~~~~l~~~~~~LkpGG~lv~~~~~~~~~~l~~~~~~~~~~~~~~ 167 (187)
T PRK00107 102 GRAEEFGQ-EEKFDVVTSRA-V------------ASLSDLVELCLPLLKPGGRFLALKGRDPEEEIAELPKALGGKVEEV 167 (187)
T ss_pred ccHhhCCC-CCCccEEEEcc-c------------cCHHHHHHHHHHhcCCCeEEEEEeCCChHHHHHHHHHhcCceEeee
Confidence 33334433 56899998753 1 2356788899999999999999988888889999999999986432
Q ss_pred -c-CCCCCCCCceEEEEEec
Q 009719 504 -D-KEPGSNGREKILVATKS 521 (527)
Q Consensus 504 -~-~e~~~~~~ekiLi~~K~ 521 (527)
. +-+|-+++..+.|.+|+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~ 187 (187)
T PRK00107 168 IELTLPGLDGERHLVIIRKK 187 (187)
T ss_pred EEEecCCCCCcEEEEEEecC
Confidence 2 22344455567777775
|
|
| >KOG3010 consensus Methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.96 E-value=8.8e-06 Score=81.83 Aligned_cols=118 Identities=16% Similarity=0.263 Sum_probs=73.4
Q ss_pred eccCcChHHHHHHHHHcCCCcE-----EeeccccCCCCC--CCcccEEEecCcccccccChHHHHHHHhhcccCCc-EEE
Q 009719 160 FAPRDSHKAQIQFALERGIPAF-----VAMLGTRRLPFP--AFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGG-YLV 231 (527)
Q Consensus 160 iAp~D~seaqvq~A~eRg~pa~-----~~v~dae~LPFp--D~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG-~lv 231 (527)
+...|.+++|+++|.+.- +.. ....+.+-.++- ++|.|+|+|+.|+ ||.+... +++++.||||+.| .+.
T Consensus 58 VIatD~s~~mL~~a~k~~-~~~y~~t~~~ms~~~~v~L~g~e~SVDlI~~Aqa~-HWFdle~-fy~~~~rvLRk~Gg~ia 134 (261)
T KOG3010|consen 58 VIATDVSEAMLKVAKKHP-PVTYCHTPSTMSSDEMVDLLGGEESVDLITAAQAV-HWFDLER-FYKEAYRVLRKDGGLIA 134 (261)
T ss_pred heeecCCHHHHHHhhcCC-CcccccCCccccccccccccCCCcceeeehhhhhH-HhhchHH-HHHHHHHHcCCCCCEEE
Confidence 344588999999997642 221 122233444554 9999999999996 9999887 9999999999866 666
Q ss_pred EecCCCCCCCchhHHHHHHHHHHhcceEEeeeecceEEEeCCCccccccccCCCCCCCCCC
Q 009719 232 ISGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKKPVGESCLSNQNEFGLELCDE 292 (527)
Q Consensus 232 iS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~~~~v~iwrKp~~~~c~~~~~~~~p~~C~~ 292 (527)
+-...-+ --.|-+.-.+-.+++|+ ...+|+-|+-+.-... ....++|-.
T Consensus 135 vW~Y~dd----~v~~pE~dsv~~r~~~~------~~p~~r~~~~n~~fdg--y~~~~F~~e 183 (261)
T KOG3010|consen 135 VWNYNDD----FVDWPEFDSVMLRLYDS------TLPYWRSPLRNLLFDG--YKTIEFPFE 183 (261)
T ss_pred EEEccCC----CcCCHHHHHHHHHHhhc------cCchhhhHHHHhhccc--ccccccccc
Confidence 6543211 11233444455555665 3445566665433322 223556653
|
|
| >PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.2e-05 Score=77.16 Aligned_cols=74 Identities=28% Similarity=0.280 Sum_probs=59.6
Q ss_pred ccCcChHHHHHHHHHcC------CCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 161 APRDSHKAQIQFALERG------IPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 161 Ap~D~seaqvq~A~eRg------~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
...|.++.+++.|.++. ....+..++...+++++++||+|+++.+++|+.+... .|.++.++|+|||++++..
T Consensus 80 ~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~I~~~~~l~~~~~~~~-~l~~~~~~L~~gG~li~~~ 158 (239)
T PRK00216 80 VGLDFSEGMLAVGREKLRDLGLSGNVEFVQGDAEALPFPDNSFDAVTIAFGLRNVPDIDK-ALREMYRVLKPGGRLVILE 158 (239)
T ss_pred EEEeCCHHHHHHHHHhhcccccccCeEEEecccccCCCCCCCccEEEEecccccCCCHHH-HHHHHHHhccCCcEEEEEE
Confidence 33366778888887652 2356677888889999999999999999988877665 9999999999999999876
Q ss_pred C
Q 009719 235 P 235 (527)
Q Consensus 235 p 235 (527)
.
T Consensus 159 ~ 159 (239)
T PRK00216 159 F 159 (239)
T ss_pred e
Confidence 4
|
|
| >PF13489 Methyltransf_23: Methyltransferase domain; PDB: 3JWJ_A 3JWH_B 2AOV_B 2AOT_A 1JQD_B 2AOX_A 1JQE_A 2AOU_B 2AOW_A 3DLI_C | Back alignment and domain information |
|---|
Probab=97.91 E-value=6.6e-07 Score=80.41 Aligned_cols=96 Identities=21% Similarity=0.297 Sum_probs=64.6
Q ss_pred CCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccccccccccCCCCCCCCCccchhhhcCccccccC
Q 009719 372 PAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKN 450 (527)
Q Consensus 372 ~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~ 450 (527)
..-.+|||+|||.|.|+..|.+.+.-+ +-.|.. ..+.. +-....-++-.+.. -.+++||+|.|..+|....
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~---~g~D~~~~~~~~---~~~~~~~~~~~~~~-~~~~~fD~i~~~~~l~~~~- 92 (161)
T PF13489_consen 21 KPGKRVLDIGCGTGSFLRALAKRGFEV---TGVDISPQMIEK---RNVVFDNFDAQDPP-FPDGSFDLIICNDVLEHLP- 92 (161)
T ss_dssp TTTSEEEEESSTTSHHHHHHHHTTSEE---EEEESSHHHHHH---TTSEEEEEECHTHH-CHSSSEEEEEEESSGGGSS-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCEE---EEEECCHHHHhh---hhhhhhhhhhhhhh-ccccchhhHhhHHHHhhcc-
Confidence 345699999999999999998887633 333322 22222 21222111111110 1248999999999998663
Q ss_pred CCCCCCCCcccccceeecccccCCcEEEEeCCH
Q 009719 451 PGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP 483 (527)
Q Consensus 451 ~~~~~~rC~~~~illEmDRILRP~G~~iird~~ 483 (527)
+...+|-+|=|+|+|||++++.+..
T Consensus 93 --------d~~~~l~~l~~~LkpgG~l~~~~~~ 117 (161)
T PF13489_consen 93 --------DPEEFLKELSRLLKPGGYLVISDPN 117 (161)
T ss_dssp --------HHHHHHHHHHHCEEEEEEEEEEEEB
T ss_pred --------cHHHHHHHHHHhcCCCCEEEEEEcC
Confidence 4688999999999999999999743
|
... |
| >PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=2.3e-05 Score=83.42 Aligned_cols=87 Identities=20% Similarity=0.228 Sum_probs=62.4
Q ss_pred hhccccccccC-CeeEEeeccCcChHHHHHHHHHcC--CCcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHH
Q 009719 143 VASFGGSMLSE-NILTLSFAPRDSHKAQIQFALERG--IPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLI 218 (527)
Q Consensus 143 vgsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eRg--~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~ 218 (527)
.|.++.++..+ +..+ ...|.+++|++.|+++. ..+.+...|...+ +++||.|++..+++|..... ..++.
T Consensus 178 ~G~~a~~la~~~g~~V---~giDlS~~~l~~A~~~~~~l~v~~~~~D~~~l---~~~fD~Ivs~~~~ehvg~~~~~~~l~ 251 (383)
T PRK11705 178 WGGLARYAAEHYGVSV---VGVTISAEQQKLAQERCAGLPVEIRLQDYRDL---NGQFDRIVSVGMFEHVGPKNYRTYFE 251 (383)
T ss_pred ccHHHHHHHHHCCCEE---EEEeCCHHHHHHHHHHhccCeEEEEECchhhc---CCCCCEEEEeCchhhCChHHHHHHHH
Confidence 34455555443 4433 33377899999998863 3445555666555 58999999999988875432 34999
Q ss_pred HHhhcccCCcEEEEecC
Q 009719 219 EVDRLLRPGGYLVISGP 235 (527)
Q Consensus 219 Ei~RVLRPGG~lviS~p 235 (527)
++.|+|||||+++++..
T Consensus 252 ~i~r~LkpGG~lvl~~i 268 (383)
T PRK11705 252 VVRRCLKPDGLFLLHTI 268 (383)
T ss_pred HHHHHcCCCcEEEEEEc
Confidence 99999999999999764
|
|
| >PRK06202 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=3.5e-05 Score=75.39 Aligned_cols=74 Identities=15% Similarity=0.135 Sum_probs=57.2
Q ss_pred eeccCcChHHHHHHHHHcCC--CcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEec
Q 009719 159 SFAPRDSHKAQIQFALERGI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 159 siAp~D~seaqvq~A~eRg~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~ 234 (527)
.+...|.++.|++.|+++.. ...+.+.++..+|+++++||+|+|+.+++|+.+.. ..+|+|+.|++| |.+++..
T Consensus 90 ~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~l~~~~~~fD~V~~~~~lhh~~d~~~~~~l~~~~r~~~--~~~~i~d 166 (232)
T PRK06202 90 EVTAIDPDPRAVAFARANPRRPGVTFRQAVSDELVAEGERFDVVTSNHFLHHLDDAEVVRLLADSAALAR--RLVLHND 166 (232)
T ss_pred EEEEEcCCHHHHHHHHhccccCCCeEEEEecccccccCCCccEEEECCeeecCChHHHHHHHHHHHHhcC--eeEEEec
Confidence 34455889999999987632 24455567778899999999999999999987653 359999999999 5555554
|
|
| >PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=3.2e-05 Score=75.21 Aligned_cols=89 Identities=19% Similarity=0.237 Sum_probs=64.3
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCC-CCCCcccEEEecCcccccccChHHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLP-FPAFSFDIVHCSRCLIPFTAYNATYLI 218 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LP-FpD~SFDlV~cs~~l~hw~d~~~~aL~ 218 (527)
|.++..+...+.. +...|.++.+++.|.++ +....+...+...++ ..++.||+|+|+.++.|..+... +|.
T Consensus 60 G~~~~~l~~~~~~---v~~iD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~~~l~~~~~~~~-~l~ 135 (233)
T PRK05134 60 GILSESMARLGAD---VTGIDASEENIEVARLHALESGLKIDYRQTTAEELAAEHPGQFDVVTCMEMLEHVPDPAS-FVR 135 (233)
T ss_pred CHHHHHHHHcCCe---EEEEcCCHHHHHHHHHHHHHcCCceEEEecCHHHhhhhcCCCccEEEEhhHhhccCCHHH-HHH
Confidence 4444455555543 33346777888887764 344455566666665 45689999999999988876655 999
Q ss_pred HHhhcccCCcEEEEecCC
Q 009719 219 EVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 219 Ei~RVLRPGG~lviS~pp 236 (527)
++.++|+|||+++++.+.
T Consensus 136 ~~~~~L~~gG~l~v~~~~ 153 (233)
T PRK05134 136 ACAKLVKPGGLVFFSTLN 153 (233)
T ss_pred HHHHHcCCCcEEEEEecC
Confidence 999999999999998763
|
|
| >PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.75 E-value=3.4e-05 Score=74.64 Aligned_cols=75 Identities=23% Similarity=0.302 Sum_probs=56.1
Q ss_pred eccCcChHHHHHHHHHc----CC-CcEEeeccc-cCCC--CCCCcccEEEecCcccccccC--------hHHHHHHHhhc
Q 009719 160 FAPRDSHKAQIQFALER----GI-PAFVAMLGT-RRLP--FPAFSFDIVHCSRCLIPFTAY--------NATYLIEVDRL 223 (527)
Q Consensus 160 iAp~D~seaqvq~A~eR----g~-pa~~~v~da-e~LP--FpD~SFDlV~cs~~l~hw~d~--------~~~aL~Ei~RV 223 (527)
+...|.++.+++.|.++ +. .+.+.++|+ +.++ +++++||+|++..+. +|... ...+|.++.|+
T Consensus 67 v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~D~V~~~~~~-p~~~~~~~~~~~~~~~~l~~i~~~ 145 (202)
T PRK00121 67 FIGIEVHEPGVGKALKKIEEEGLTNLRLLCGDAVEVLLDMFPDGSLDRIYLNFPD-PWPKKRHHKRRLVQPEFLALYARK 145 (202)
T ss_pred EEEEEechHHHHHHHHHHHHcCCCCEEEEecCHHHHHHHHcCccccceEEEECCC-CCCCccccccccCCHHHHHHHHHH
Confidence 33446677888877653 33 356777888 8888 889999999987654 45321 23489999999
Q ss_pred ccCCcEEEEecC
Q 009719 224 LRPGGYLVISGP 235 (527)
Q Consensus 224 LRPGG~lviS~p 235 (527)
|||||+|+++.+
T Consensus 146 LkpgG~l~i~~~ 157 (202)
T PRK00121 146 LKPGGEIHFATD 157 (202)
T ss_pred cCCCCEEEEEcC
Confidence 999999999876
|
|
| >PRK10258 biotin biosynthesis protein BioC; Provisional | Back alignment and domain information |
|---|
Probab=97.73 E-value=2.4e-05 Score=77.16 Aligned_cols=100 Identities=17% Similarity=0.140 Sum_probs=63.0
Q ss_pred cCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCC-CCchhHhhhccc-ccc-ccccCCCCCCCCCccchhhhcCcc
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARK-SSTLSVIYDRGL-IGV-YHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~-~ntl~vi~eRGL-iG~-~hdwce~fstYPrtyDLiHa~~~f 445 (527)
+......+|||+|||.|.++..|..... .|+-.|- +..+..+-+++- +.. ..|. |.++....+||+|-++..+
T Consensus 38 l~~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~~D~s~~~l~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~V~s~~~l 113 (251)
T PRK10258 38 LPQRKFTHVLDAGCGPGWMSRYWRERGS---QVTALDLSPPMLAQARQKDAADHYLAGDI-ESLPLATATFDLAWSNLAV 113 (251)
T ss_pred cCccCCCeEEEeeCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhCCCCCEEEcCc-ccCcCCCCcEEEEEECchh
Confidence 3334567899999999999988866542 2222232 244454544432 111 1222 3333334799999887555
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
. |. -+...+|-||-|+|+|||.+++..
T Consensus 114 ~-~~--------~d~~~~l~~~~~~Lk~gG~l~~~~ 140 (251)
T PRK10258 114 Q-WC--------GNLSTALRELYRVVRPGGVVAFTT 140 (251)
T ss_pred h-hc--------CCHHHHHHHHHHHcCCCeEEEEEe
Confidence 3 32 135688999999999999999984
|
|
| >PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins | Back alignment and domain information |
|---|
Probab=97.73 E-value=2.6e-05 Score=76.10 Aligned_cols=87 Identities=21% Similarity=0.308 Sum_probs=67.5
Q ss_pred hcccccccc-CCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccc-cCCC-CCCCcccEEEecCcccccccChHHHHHHH
Q 009719 144 ASFGGSMLS-ENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGT-RRLP-FPAFSFDIVHCSRCLIPFTAYNATYLIEV 220 (527)
Q Consensus 144 gsfga~Ll~-r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~da-e~LP-FpD~SFDlV~cs~~l~hw~d~~~~aL~Ei 220 (527)
|.+-++|.+ +++.+..+ +.+++.+..+.+||+++. ++|. +.|+ |+|+|||.|+++.++.+..++.. +|.||
T Consensus 25 G~LL~~L~~~k~v~g~Gv---Eid~~~v~~cv~rGv~Vi--q~Dld~gL~~f~d~sFD~VIlsqtLQ~~~~P~~-vL~Em 98 (193)
T PF07021_consen 25 GELLAYLKDEKQVDGYGV---EIDPDNVAACVARGVSVI--QGDLDEGLADFPDQSFDYVILSQTLQAVRRPDE-VLEEM 98 (193)
T ss_pred hHHHHHHHHhcCCeEEEE---ecCHHHHHHHHHcCCCEE--ECCHHHhHhhCCCCCccEEehHhHHHhHhHHHH-HHHHH
Confidence 444445544 67777666 667888999999998744 4453 4575 99999999999999999987776 99999
Q ss_pred hhcccCCcEEEEecCCC-CC
Q 009719 221 DRLLRPGGYLVISGPPV-QW 239 (527)
Q Consensus 221 ~RVLRPGG~lviS~pp~-~~ 239 (527)
.|| |...++|-|+. +|
T Consensus 99 lRV---gr~~IVsFPNFg~W 115 (193)
T PF07021_consen 99 LRV---GRRAIVSFPNFGHW 115 (193)
T ss_pred HHh---cCeEEEEecChHHH
Confidence 888 77999999853 44
|
Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells []. |
| >TIGR01983 UbiG ubiquinone biosynthesis O-methyltransferase | Back alignment and domain information |
|---|
Probab=97.73 E-value=5e-05 Score=73.06 Aligned_cols=86 Identities=22% Similarity=0.267 Sum_probs=62.5
Q ss_pred cccccccCCeeEEeeccCcChHHHHHHHHHc----CC-CcEEeeccccCCCCC-CCcccEEEecCcccccccChHHHHHH
Q 009719 146 FGGSMLSENILTLSFAPRDSHKAQIQFALER----GI-PAFVAMLGTRRLPFP-AFSFDIVHCSRCLIPFTAYNATYLIE 219 (527)
Q Consensus 146 fga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~-pa~~~v~dae~LPFp-D~SFDlV~cs~~l~hw~d~~~~aL~E 219 (527)
++..+...+.. +...|.++.+++.|+++ +. ...+..++.+.++.. .++||+|+|..+++|..+... +|.+
T Consensus 59 ~~~~l~~~~~~---v~~iD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~l~~~~~~~~-~l~~ 134 (224)
T TIGR01983 59 LSEPLARLGAN---VTGIDASEENIEVAKLHAKKDPLLKIEYRCTSVEDLAEKGAKSFDVVTCMEVLEHVPDPQA-FIRA 134 (224)
T ss_pred HHHHHHhcCCe---EEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhcCCCCCccEEEehhHHHhCCCHHH-HHHH
Confidence 33344444433 33346778888877664 33 356666777777765 489999999999888766555 9999
Q ss_pred HhhcccCCcEEEEecC
Q 009719 220 VDRLLRPGGYLVISGP 235 (527)
Q Consensus 220 i~RVLRPGG~lviS~p 235 (527)
+.++|+|||+++++++
T Consensus 135 ~~~~L~~gG~l~i~~~ 150 (224)
T TIGR01983 135 CAQLLKPGGILFFSTI 150 (224)
T ss_pred HHHhcCCCcEEEEEec
Confidence 9999999999999876
|
This model represents an O-methyltransferase believed to act at two points in the ubiquinone biosynthetic pathway in bacteria (UbiG) and fungi (COQ3). A separate methylase (MenG/UbiE) catalyzes the single C-methylation step. The most commonly used names for genes in this family do not indicate whether this gene is an O-methyl, or C-methyl transferase. |
| >PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00021 Score=69.07 Aligned_cols=90 Identities=19% Similarity=0.197 Sum_probs=63.9
Q ss_pred eccCcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 160 FAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 160 iAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
+...|.++.|++.|+++ +++ ..+..++++.++. +++||+|+|.. + .+.. .++.++.|+|||||+|++..
T Consensus 72 V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~~~-~~~fDlV~~~~-~---~~~~-~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 72 VTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEFGQ-EEKFDVVTSRA-V---ASLS-DLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred EEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhCCC-CCCccEEEEcc-c---cCHH-HHHHHHHHhcCCCeEEEEEe
Confidence 33337778888777643 443 5667788888887 78999999864 2 2223 49999999999999999986
Q ss_pred CCCCCCCchhHHHHHHHHHHhcceEEee
Q 009719 235 PPVQWPKQDKEWADLQAVARALCYELIA 262 (527)
Q Consensus 235 pp~~~~~~~~~w~~i~~l~~~mcW~~~~ 262 (527)
.+.. -.+++++++.+-|.+..
T Consensus 146 ~~~~-------~~~l~~~~~~~~~~~~~ 166 (187)
T PRK00107 146 GRDP-------EEEIAELPKALGGKVEE 166 (187)
T ss_pred CCCh-------HHHHHHHHHhcCceEee
Confidence 5311 13577788888887543
|
|
| >PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4) | Back alignment and domain information |
|---|
Probab=97.66 E-value=5.7e-05 Score=77.08 Aligned_cols=86 Identities=23% Similarity=0.333 Sum_probs=59.5
Q ss_pred hhccccccccC-CeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccCh-H
Q 009719 143 VASFGGSMLSE-NILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-A 214 (527)
Q Consensus 143 vgsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~ 214 (527)
.|+++-++..+ |+.+..+ ..|++|++.|+++ |+. +.+...|...++. +||.|++-.++.|..... .
T Consensus 73 wG~~~~~~a~~~g~~v~gi---tlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~~~~~---~fD~IvSi~~~Ehvg~~~~~ 146 (273)
T PF02353_consen 73 WGGLAIYAAERYGCHVTGI---TLSEEQAEYARERIREAGLEDRVEVRLQDYRDLPG---KFDRIVSIEMFEHVGRKNYP 146 (273)
T ss_dssp TSHHHHHHHHHH--EEEEE---ES-HHHHHHHHHHHHCSTSSSTEEEEES-GGG------S-SEEEEESEGGGTCGGGHH
T ss_pred ccHHHHHHHHHcCcEEEEE---ECCHHHHHHHHHHHHhcCCCCceEEEEeeccccCC---CCCEEEEEechhhcChhHHH
Confidence 46666677777 7766666 4578999988754 554 4566677766666 899999999999996432 3
Q ss_pred HHHHHHhhcccCCcEEEEec
Q 009719 215 TYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 215 ~aL~Ei~RVLRPGG~lviS~ 234 (527)
.++.++.|+|||||.+++..
T Consensus 147 ~~f~~~~~~LkpgG~~~lq~ 166 (273)
T PF02353_consen 147 AFFRKISRLLKPGGRLVLQT 166 (273)
T ss_dssp HHHHHHHHHSETTEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEe
Confidence 49999999999999999754
|
All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: |
| >KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.65 E-value=4.9e-05 Score=77.37 Aligned_cols=87 Identities=24% Similarity=0.268 Sum_probs=62.4
Q ss_pred hhcccccc----ccCCeeEEeeccCcChHHHHHHHHHcCC--Cc---------EEeeccccCCCCCCCcccEEEecCccc
Q 009719 143 VASFGGSM----LSENILTLSFAPRDSHKAQIQFALERGI--PA---------FVAMLGTRRLPFPAFSFDIVHCSRCLI 207 (527)
Q Consensus 143 vgsfga~L----l~r~V~~msiAp~D~seaqvq~A~eRg~--pa---------~~~v~dae~LPFpD~SFDlV~cs~~l~ 207 (527)
+|+.||-| ...|. +++..|.++.||+.|++..- |. .+...+.+.+- ..||+|+|+.+++
T Consensus 96 vGCGgGLLSepLArlga---~V~GID~s~~~V~vA~~h~~~dP~~~~~~~y~l~~~~~~~E~~~---~~fDaVvcsevle 169 (282)
T KOG1270|consen 96 VGCGGGLLSEPLARLGA---QVTGIDASDDMVEVANEHKKMDPVLEGAIAYRLEYEDTDVEGLT---GKFDAVVCSEVLE 169 (282)
T ss_pred eccCccccchhhHhhCC---eeEeecccHHHHHHHHHhhhcCchhccccceeeehhhcchhhcc---cccceeeeHHHHH
Confidence 77755544 22354 45556999999999988621 11 11223334432 2299999999999
Q ss_pred ccccChHHHHHHHhhcccCCcEEEEecCC
Q 009719 208 PFTAYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 208 hw~d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
|..+... ++.-+.+.|||||.+++++-.
T Consensus 170 HV~dp~~-~l~~l~~~lkP~G~lfittin 197 (282)
T KOG1270|consen 170 HVKDPQE-FLNCLSALLKPNGRLFITTIN 197 (282)
T ss_pred HHhCHHH-HHHHHHHHhCCCCceEeeehh
Confidence 9988877 999999999999999999864
|
|
| >PLN02233 ubiquinone biosynthesis methyltransferase | Back alignment and domain information |
|---|
Probab=97.65 E-value=3.3e-05 Score=77.76 Aligned_cols=95 Identities=21% Similarity=0.202 Sum_probs=61.8
Q ss_pred eeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhhcc-------c--cccccccCCCCCCCC-Cccchhhh
Q 009719 375 RNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYDRG-------L--IGVYHDWCEPFSTYP-RTYDLIHV 441 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~eRG-------L--iG~~hdwce~fstYP-rtyDLiHa 441 (527)
..|||+|||.|.++..|.++ +-. +|+-.|-. +-|..+-+|. . |-..+.=.+.++ || .+||+|.+
T Consensus 75 ~~VLDlGcGtG~~~~~la~~~~~~~--~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~lp-~~~~sfD~V~~ 151 (261)
T PLN02233 75 DRVLDLCCGSGDLAFLLSEKVGSDG--KVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATDLP-FDDCYFDAITM 151 (261)
T ss_pred CEEEEECCcCCHHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccccCC-CCCCCEeEEEE
Confidence 47999999999998887543 111 23333332 4555554442 1 112222234444 45 79999999
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+..+..+. +...+|-||-|+|||||.+++.|
T Consensus 152 ~~~l~~~~---------d~~~~l~ei~rvLkpGG~l~i~d 182 (261)
T PLN02233 152 GYGLRNVV---------DRLKAMQEMYRVLKPGSRVSILD 182 (261)
T ss_pred ecccccCC---------CHHHHHHHHHHHcCcCcEEEEEE
Confidence 87776542 34778999999999999998875
|
|
| >COG4627 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.61 E-value=9.7e-06 Score=77.00 Aligned_cols=52 Identities=31% Similarity=0.402 Sum_probs=46.6
Q ss_pred cccCCCCCCCcccEEEecCcccccccChH-HHHHHHhhcccCCcEEEEecCCC
Q 009719 186 GTRRLPFPAFSFDIVHCSRCLIPFTAYNA-TYLIEVDRLLRPGGYLVISGPPV 237 (527)
Q Consensus 186 dae~LPFpD~SFDlV~cs~~l~hw~d~~~-~aL~Ei~RVLRPGG~lviS~pp~ 237 (527)
....++|.|+|.|++.|.+++.|+.-+++ .+++|.+|+|||||+|-++.|..
T Consensus 37 As~e~~F~dns~d~iyaeHvlEHlt~~Eg~~alkechr~Lrp~G~LriAvPdl 89 (185)
T COG4627 37 ASNESMFEDNSVDAIYAEHVLEHLTYDEGTSALKECHRFLRPGGKLRIAVPDL 89 (185)
T ss_pred hhhhccCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCcEEEEEcCCc
Confidence 35678999999999999999999987765 49999999999999999999853
|
|
| >PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00043 Score=76.33 Aligned_cols=125 Identities=9% Similarity=0.078 Sum_probs=71.8
Q ss_pred CeeeEeecCCCccchhhhccCC--CeeEEEecCCCC--CCchhHhhhccccccccccCCCC----CCCC-CccchhhhcC
Q 009719 373 AIRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARK--SSTLSVIYDRGLIGVYHDWCEPF----STYP-RTYDLIHVSG 443 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~--~ntl~vi~eRGLiG~~hdwce~f----stYP-rtyDLiHa~~ 443 (527)
.-..++|+|||.|.|.+.+... +.-++-|-.... -..+.-+.++||-.+. =.|..+ .-+| .+.|-||-.
T Consensus 347 ~~p~~lEIG~G~G~~~~~~A~~~p~~~~iGiE~~~~~~~~~~~~~~~~~l~N~~-~~~~~~~~~~~~~~~~sv~~i~i~- 424 (506)
T PRK01544 347 KRKVFLEIGFGMGEHFINQAKMNPDALFIGVEVYLNGVANVLKLAGEQNITNFL-LFPNNLDLILNDLPNNSLDGIYIL- 424 (506)
T ss_pred CCceEEEECCCchHHHHHHHHhCCCCCEEEEEeeHHHHHHHHHHHHHcCCCeEE-EEcCCHHHHHHhcCcccccEEEEE-
Confidence 4689999999999999988433 232322222221 1445666777762221 122221 2245 778877753
Q ss_pred ccc-cccCCCCCCCCCcccccceeecccccCCcEEEEe-CCHHHHHHHHHH-HhcCCcee
Q 009719 444 IES-LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR-DSPEVIDKVSRI-ANTVRWTA 500 (527)
Q Consensus 444 ~fs-~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir-d~~~~~~~i~~i-~~~l~W~~ 500 (527)
|. .|--..-.+.|=--...|-++-|+|+|||.+.++ |..++.+.+.+. -..-.++.
T Consensus 425 -FPDPWpKkrh~krRl~~~~fl~~~~~~Lk~gG~i~~~TD~~~y~~~~~~~~~~~~~f~~ 483 (506)
T PRK01544 425 -FPDPWIKNKQKKKRIFNKERLKILQDKLKDNGNLVFASDIENYFYEAIELIQQNGNFEI 483 (506)
T ss_pred -CCCCCCCCCCccccccCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhCCCeEe
Confidence 53 4521111233333458899999999999999887 555665554444 33333443
|
|
| >KOG2940 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.55 E-value=2.7e-05 Score=78.16 Aligned_cols=89 Identities=18% Similarity=0.187 Sum_probs=71.9
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc---CCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER---GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIE 219 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR---g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~E 219 (527)
+|....+|+.+||.- +...|.|..|++.++.. ++.....+.|-+.|||.++|||+|++|..+ ||.++....+..
T Consensus 83 ~G~v~rhl~~e~vek--li~~DtS~~M~~s~~~~qdp~i~~~~~v~DEE~Ldf~ens~DLiisSlsl-HW~NdLPg~m~~ 159 (325)
T KOG2940|consen 83 LGAVKRHLRGEGVEK--LIMMDTSYDMIKSCRDAQDPSIETSYFVGDEEFLDFKENSVDLIISSLSL-HWTNDLPGSMIQ 159 (325)
T ss_pred hhhhhHHHHhcchhh--eeeeecchHHHHHhhccCCCceEEEEEecchhcccccccchhhhhhhhhh-hhhccCchHHHH
Confidence 455566888888763 34458888999988765 334455678999999999999999999986 999887669999
Q ss_pred HhhcccCCcEEEEec
Q 009719 220 VDRLLRPGGYLVISG 234 (527)
Q Consensus 220 i~RVLRPGG~lviS~ 234 (527)
+.-.|||.|.|+.|-
T Consensus 160 ck~~lKPDg~Fiasm 174 (325)
T KOG2940|consen 160 CKLALKPDGLFIASM 174 (325)
T ss_pred HHHhcCCCccchhHH
Confidence 999999999999764
|
|
| >TIGR00537 hemK_rel_arch HemK-related putative methylase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00064 Score=63.95 Aligned_cols=88 Identities=14% Similarity=0.136 Sum_probs=58.8
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccC------
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY------ 212 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~------ 212 (527)
.|.++..+..++. .+...|.++.+++.|+++ +....+..+|....+ .++||+|+++-..+|..+.
T Consensus 30 ~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--~~~fD~Vi~n~p~~~~~~~~~~~~~ 104 (179)
T TIGR00537 30 TGLVAIRLKGKGK---CILTTDINPFAVKELRENAKLNNVGLDVVMTDLFKGV--RGKFDVILFNPPYLPLEDDLRRGDW 104 (179)
T ss_pred hhHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHHcCCceEEEEccccccc--CCcccEEEECCCCCCCcchhcccch
Confidence 3444445555554 233347788888887764 344455666664443 4699999999776655431
Q ss_pred --------------hHHHHHHHhhcccCCcEEEEecC
Q 009719 213 --------------NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 213 --------------~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
...+|.++.|+|||||.+++..+
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~~~~~~~ 141 (179)
T TIGR00537 105 LDVAIDGGKDGRKVIDRFLDELPEILKEGGRVQLIQS 141 (179)
T ss_pred hhhhhhcCCchHHHHHHHHHhHHHhhCCCCEEEEEEe
Confidence 12379999999999999999875
|
The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes. |
| >PLN02244 tocopherol O-methyltransferase | Back alignment and domain information |
|---|
Probab=97.54 E-value=4.8e-05 Score=79.42 Aligned_cols=94 Identities=17% Similarity=0.258 Sum_probs=60.1
Q ss_pred CeeeEeecCCCccchhhhccCC---CeeEEEecCCCCCCchhH----hhhccccc----cccccCCCCCCCC-Cccchhh
Q 009719 373 AIRNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKSSTLSV----IYDRGLIG----VYHDWCEPFSTYP-RTYDLIH 440 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~ntl~v----i~eRGLiG----~~hdwce~fstYP-rtyDLiH 440 (527)
.-..|||+|||.|+++..|.++ .|..+.+.| +.+.. +-++|+.. ...|..+ ++ +| .+||+|.
T Consensus 118 ~~~~VLDiGCG~G~~~~~La~~~g~~v~gvD~s~----~~i~~a~~~~~~~g~~~~v~~~~~D~~~-~~-~~~~~FD~V~ 191 (340)
T PLN02244 118 RPKRIVDVGCGIGGSSRYLARKYGANVKGITLSP----VQAARANALAAAQGLSDKVSFQVADALN-QP-FEDGQFDLVW 191 (340)
T ss_pred CCCeEEEecCCCCHHHHHHHHhcCCEEEEEECCH----HHHHHHHHHHHhcCCCCceEEEEcCccc-CC-CCCCCccEEE
Confidence 3467999999999999888654 343333322 32322 23345421 1123222 22 33 7999999
Q ss_pred hcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 441 VSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+...+.++. +...+|-||-|+|||||.++|.+
T Consensus 192 s~~~~~h~~---------d~~~~l~e~~rvLkpGG~lvi~~ 223 (340)
T PLN02244 192 SMESGEHMP---------DKRKFVQELARVAAPGGRIIIVT 223 (340)
T ss_pred ECCchhccC---------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 977666553 13578999999999999999853
|
|
| >PRK08317 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=5e-05 Score=72.40 Aligned_cols=97 Identities=23% Similarity=0.315 Sum_probs=60.7
Q ss_pred CCeeeEeecCCCccchhhhccCC---CeeEEEecCCCCCCchhHhhhc--cccccc----cccCCCCCCCC-Cccchhhh
Q 009719 372 PAIRNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKSSTLSVIYDR--GLIGVY----HDWCEPFSTYP-RTYDLIHV 441 (527)
Q Consensus 372 ~~iRnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~ntl~vi~eR--GLiG~~----hdwce~fstYP-rtyDLiHa 441 (527)
..-.+|||+|||.|.++..+.+. ..-|.-+-+ .++.+..+-++ +..... .|.. .++ ++ .+||+||+
T Consensus 18 ~~~~~vLdiG~G~G~~~~~~a~~~~~~~~v~~~d~--~~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~-~~~~~~D~v~~ 93 (241)
T PRK08317 18 QPGDRVLDVGCGPGNDARELARRVGPEGRVVGIDR--SEAMLALAKERAAGLGPNVEFVRGDAD-GLP-FPDGSFDAVRS 93 (241)
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCCcEEEEEeC--CHHHHHHHHHHhhCCCCceEEEecccc-cCC-CCCCCceEEEE
Confidence 33458999999999998887543 122222221 12445555554 111111 1211 112 33 78999999
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
..+|.... +...++-++-|+|+|||++++.+
T Consensus 94 ~~~~~~~~---------~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 94 DRVLQHLE---------DPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred echhhccC---------CHHHHHHHHHHHhcCCcEEEEEe
Confidence 98887653 24678999999999999998864
|
|
| >PRK12335 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=5.4e-05 Score=76.98 Aligned_cols=114 Identities=15% Similarity=0.148 Sum_probs=70.3
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCCC-Cchh----Hhhhcccc--ccccccCCCCCCCCCccchhhhcCccccc
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLS----VIYDRGLI--GVYHDWCEPFSTYPRTYDLIHVSGIESLI 448 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~----vi~eRGLi--G~~hdwce~fstYPrtyDLiHa~~~fs~~ 448 (527)
+|||+|||.|.++.+|.+...=| .-.|.. .-+. .+-+.|+- -...|--+ +. .+..||+|-+..+|...
T Consensus 123 ~vLDlGcG~G~~~~~la~~g~~V---~avD~s~~ai~~~~~~~~~~~l~v~~~~~D~~~-~~-~~~~fD~I~~~~vl~~l 197 (287)
T PRK12335 123 KALDLGCGQGRNSLYLALLGFDV---TAVDINQQSLENLQEIAEKENLNIRTGLYDINS-AS-IQEEYDFILSTVVLMFL 197 (287)
T ss_pred CEEEeCCCCCHHHHHHHHCCCEE---EEEECCHHHHHHHHHHHHHcCCceEEEEechhc-cc-ccCCccEEEEcchhhhC
Confidence 79999999999999987765333 333332 2222 23345651 11112211 11 26889999998777543
Q ss_pred cCCCCCCCCCcccccceeecccccCCcEEEEe---CCH--------H---HHHHHHHHHhcCCceeEEe
Q 009719 449 KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR---DSP--------E---VIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 449 ~~~~~~~~rC~~~~illEmDRILRP~G~~iir---d~~--------~---~~~~i~~i~~~l~W~~~~~ 503 (527)
+.-.+..++-+|-|+|+|||++++- +.. . .-.+++++.+. |++...
T Consensus 198 -------~~~~~~~~l~~~~~~LkpgG~~l~v~~~~~~~~~~~~p~~~~~~~~el~~~~~~--~~i~~~ 257 (287)
T PRK12335 198 -------NRERIPAIIKNMQEHTNPGGYNLIVCAMDTEDYPCPMPFSFTFKEGELKDYYQD--WEIVKY 257 (287)
T ss_pred -------CHHHHHHHHHHHHHhcCCCcEEEEEEecccccCCCCCCCCcccCHHHHHHHhCC--CEEEEE
Confidence 2234678999999999999996542 110 1 23456666666 887765
|
|
| >PF05401 NodS: Nodulation protein S (NodS); InterPro: IPR008715 This entry consists of nodulation S (NodS) proteins | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00018 Score=70.64 Aligned_cols=129 Identities=16% Similarity=0.157 Sum_probs=74.9
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC--CC-cEEeeccccCCCCCCCcccEEEecCcccccccC--hHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG--IP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY--NATYL 217 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg--~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~--~~~aL 217 (527)
.|.|...|..+-- .+...|.++..++.|++|- .+ +.+.+++... ..|++.||+|++|.++.++.+. ...++
T Consensus 54 ~G~lT~~LA~rCd---~LlavDis~~Al~~Ar~Rl~~~~~V~~~~~dvp~-~~P~~~FDLIV~SEVlYYL~~~~~L~~~l 129 (201)
T PF05401_consen 54 IGVLTERLAPRCD---RLLAVDISPRALARARERLAGLPHVEWIQADVPE-FWPEGRFDLIVLSEVLYYLDDAEDLRAAL 129 (201)
T ss_dssp TSHHHHHHGGGEE---EEEEEES-HHHHHHHHHHTTT-SSEEEEES-TTT----SS-EEEEEEES-GGGSSSHHHHHHHH
T ss_pred ccHHHHHHHHhhC---ceEEEeCCHHHHHHHHHhcCCCCCeEEEECcCCC-CCCCCCeeEEEEehHhHcCCCHHHHHHHH
Confidence 4566666666532 3444478889999999883 33 4456666533 3689999999999998777643 23589
Q ss_pred HHHhhcccCCcEEEEecCC----CCCCCchhHHHHHHHHHHhcceEEeeeecceEEEeCCCcccccc
Q 009719 218 IEVDRLLRPGGYLVISGPP----VQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKKPVGESCLS 280 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~pp----~~~~~~~~~w~~i~~l~~~mcW~~~~~~~~v~iwrKp~~~~c~~ 280 (527)
..+...|+|||.||+.+.. ..| ++..+=+.|.++...+ ..+-+.+.+=....|+.|-.
T Consensus 130 ~~l~~~L~pgG~LV~g~~rd~~c~~w-gh~~ga~tv~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 191 (201)
T PF05401_consen 130 DRLVAALAPGGHLVFGHARDANCRRW-GHAAGAETVLEMLQEH----LTEVERVECRGGSPNEDCLL 191 (201)
T ss_dssp HHHHHTEEEEEEEEEEEE-HHHHHHT-T-S--HHHHHHHHHHH----SEEEEEEEEE-SSTTSEEEE
T ss_pred HHHHHHhCCCCEEEEEEecCCccccc-CcccchHHHHHHHHHH----hhheeEEEEcCCCCCCceEe
Confidence 9999999999999996641 122 1223334455555432 22333455555555566654
|
The products of the rhizobial nodulation genes are involved in the biosynthesis of lipochitin oligosaccharides (LCOs), which are host-specific signal molecules required for nodule formation. NodS is an S-adenosyl-L-methionine (SAM)-dependent methyltransferase involved in N methylation of LCOs. NodS uses N-deacetylated chitooligosaccharides, the products of the NodBC proteins, as its methyl acceptors [].; GO: 0008757 S-adenosylmethionine-dependent methyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0009877 nodulation; PDB: 3OFK_D 3OFJ_A. |
| >PRK14103 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=7.5e-05 Score=74.22 Aligned_cols=99 Identities=15% Similarity=0.210 Sum_probs=64.6
Q ss_pred ccCCCCeeeEeecCCCccchhhhccCC--CeeEEEecCCCC-CCchhHhhhccccccccccCCCCCCCCCccchhhhcCc
Q 009719 368 KLGTPAIRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARK-SSTLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGI 444 (527)
Q Consensus 368 ~i~~~~iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~-~ntl~vi~eRGLiG~~hdwce~fstYPrtyDLiHa~~~ 444 (527)
.+....-..|||+|||.|.++.+|..+ .. .|+=.|- ++.+..+-++++-=+..|- +.+. ...+||+|++..+
T Consensus 24 ~l~~~~~~~vLDlGcG~G~~~~~l~~~~p~~---~v~gvD~s~~~~~~a~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~ 98 (255)
T PRK14103 24 RVGAERARRVVDLGCGPGNLTRYLARRWPGA---VIEALDSSPEMVAAARERGVDARTGDV-RDWK-PKPDTDVVVSNAA 98 (255)
T ss_pred hCCCCCCCEEEEEcCCCCHHHHHHHHHCCCC---EEEEEECCHHHHHHHHhcCCcEEEcCh-hhCC-CCCCceEEEEehh
Confidence 344333478999999999999888655 22 2222332 3566666667641111221 2221 2368999999888
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
|-... +...+|-|+-|+|+|||++++.
T Consensus 99 l~~~~---------d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 99 LQWVP---------EHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred hhhCC---------CHHHHHHHHHHhCCCCcEEEEE
Confidence 76432 2367889999999999999986
|
|
| >smart00828 PKS_MT Methyltransferase in polyketide synthase (PKS) enzymes | Back alignment and domain information |
|---|
Probab=97.45 E-value=3.3e-05 Score=74.55 Aligned_cols=94 Identities=22% Similarity=0.371 Sum_probs=60.1
Q ss_pred eeEeecCCCccchhhhccCC--CeeEEEecCCCCCCchhHhhh----cccc---ccc-cccCCCCCCCCCccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKSSTLSVIYD----RGLI---GVY-HDWCEPFSTYPRTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~ntl~vi~e----RGLi---G~~-hdwce~fstYPrtyDLiHa~~~ 444 (527)
+.|||+|||.|+++..+.+. +.-|.-+-. +++++..+-+ .|+- -+. .|..+. .+|.+||+|++..+
T Consensus 1 ~~vLDiGcG~G~~~~~la~~~~~~~v~gid~--s~~~~~~a~~~~~~~gl~~~i~~~~~d~~~~--~~~~~fD~I~~~~~ 76 (224)
T smart00828 1 KRVLDFGCGYGSDLIDLAERHPHLQLHGYTI--SPEQAEVGRERIRALGLQGRIRIFYRDSAKD--PFPDTYDLVFGFEV 76 (224)
T ss_pred CeEEEECCCCCHHHHHHHHHCCCCEEEEEEC--CHHHHHHHHHHHHhcCCCcceEEEecccccC--CCCCCCCEeehHHH
Confidence 36999999999998887543 232222211 2244443333 3542 222 222111 24678999999888
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
|.... +...++-++.|+|+|||++++.+
T Consensus 77 l~~~~---------~~~~~l~~~~~~LkpgG~l~i~~ 104 (224)
T smart00828 77 IHHIK---------DKMDLFSNISRHLKDGGHLVLAD 104 (224)
T ss_pred HHhCC---------CHHHHHHHHHHHcCCCCEEEEEE
Confidence 77543 24678999999999999999975
|
|
| >PRK15068 tRNA mo(5)U34 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=7.1e-05 Score=77.89 Aligned_cols=95 Identities=16% Similarity=0.226 Sum_probs=58.3
Q ss_pred eeEeecCCCccchhhhccCCC-eeEEEecCCCCC-CchhHhhhc--cc---cccccccCCCCCCCCCccchhhhcCcccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDP-VWVMNVVPARKS-STLSVIYDR--GL---IGVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~-VwvMnvvp~~~~-ntl~vi~eR--GL---iG~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
+.|+|+|||.|.|+..|.... -.|.-|=|...- .+...+ .+ +. |-+.+.=-|.++. +.+||+|+|.+++-+
T Consensus 124 ~~VLDIGCG~G~~~~~la~~g~~~V~GiD~S~~~l~q~~a~-~~~~~~~~~i~~~~~d~e~lp~-~~~FD~V~s~~vl~H 201 (322)
T PRK15068 124 RTVLDVGCGNGYHMWRMLGAGAKLVVGIDPSQLFLCQFEAV-RKLLGNDQRAHLLPLGIEQLPA-LKAFDTVFSMGVLYH 201 (322)
T ss_pred CEEEEeccCCcHHHHHHHHcCCCEEEEEcCCHHHHHHHHHH-HHhcCCCCCeEEEeCCHHHCCC-cCCcCEEEECChhhc
Confidence 689999999999998886543 234443332211 111111 11 10 1111100123333 789999999888764
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
. -+...+|-++-|.|+|||.+|+.
T Consensus 202 ~---------~dp~~~L~~l~~~LkpGG~lvl~ 225 (322)
T PRK15068 202 R---------RSPLDHLKQLKDQLVPGGELVLE 225 (322)
T ss_pred c---------CCHHHHHHHHHHhcCCCcEEEEE
Confidence 3 24578999999999999999986
|
|
| >PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4) | Back alignment and domain information |
|---|
Probab=97.40 E-value=3.5e-05 Score=78.59 Aligned_cols=101 Identities=17% Similarity=0.286 Sum_probs=61.8
Q ss_pred cCCCCeeeEeecCCCccchhhhccCC-CeeEEEecCCCCCCchhH----hhhccccccccccCCCCCCCCCccchhhhcC
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKSSTLSV----IYDRGLIGVYHDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~ntl~v----i~eRGLiG~~hdwce~fstYPrtyDLiHa~~ 443 (527)
|+.|. .|||+|||.||++-.+.++ .+-|.-|-- +++|... |-++||-+...=-+.-|...+-+||-|=+-+
T Consensus 60 l~~G~--~vLDiGcGwG~~~~~~a~~~g~~v~gitl--S~~Q~~~a~~~~~~~gl~~~v~v~~~D~~~~~~~fD~IvSi~ 135 (273)
T PF02353_consen 60 LKPGD--RVLDIGCGWGGLAIYAAERYGCHVTGITL--SEEQAEYARERIREAGLEDRVEVRLQDYRDLPGKFDRIVSIE 135 (273)
T ss_dssp --TT---EEEEES-TTSHHHHHHHHHH--EEEEEES---HHHHHHHHHHHHCSTSSSTEEEEES-GGG---S-SEEEEES
T ss_pred CCCCC--EEEEeCCCccHHHHHHHHHcCcEEEEEEC--CHHHHHHHHHHHHhcCCCCceEEEEeeccccCCCCCEEEEEe
Confidence 66664 8999999999999999777 665543332 3355544 4578874332212222333344899887777
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
.|-+.. +=+...++-+++|+|+|||.+++.
T Consensus 136 ~~Ehvg-------~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 136 MFEHVG-------RKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp EGGGTC-------GGGHHHHHHHHHHHSETTEEEEEE
T ss_pred chhhcC-------hhHHHHHHHHHHHhcCCCcEEEEE
Confidence 777652 234567899999999999999987
|
All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: |
| >TIGR00091 tRNA (guanine-N(7)-)-methyltransferase | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00019 Score=68.91 Aligned_cols=71 Identities=21% Similarity=0.274 Sum_probs=51.8
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCC---CCCCcccEEEecCcccccccCh--------HHHHHHHhhcccCC
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLP---FPAFSFDIVHCSRCLIPFTAYN--------ATYLIEVDRLLRPG 227 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LP---FpD~SFDlV~cs~~l~hw~d~~--------~~aL~Ei~RVLRPG 227 (527)
|.++.+++.|+++ ++. +.+..+|+..++ +++++||.|++... .+|+... ..++.++.|+||||
T Consensus 47 D~~~~~l~~a~~~~~~~~l~ni~~i~~d~~~~~~~~~~~~~~d~v~~~~p-dpw~k~~h~~~r~~~~~~l~~~~r~Lkpg 125 (194)
T TIGR00091 47 EIHTPIVLAANNKANKLGLKNLHVLCGDANELLDKFFPDGSLSKVFLNFP-DPWPKKRHNKRRITQPHFLKEYANVLKKG 125 (194)
T ss_pred EeeHHHHHHHHHHHHHhCCCCEEEEccCHHHHHHhhCCCCceeEEEEECC-CcCCCCCccccccCCHHHHHHHHHHhCCC
Confidence 5566777776543 443 556778887665 67789999998765 4665432 23899999999999
Q ss_pred cEEEEecC
Q 009719 228 GYLVISGP 235 (527)
Q Consensus 228 G~lviS~p 235 (527)
|.|++++.
T Consensus 126 G~l~~~td 133 (194)
T TIGR00091 126 GVIHFKTD 133 (194)
T ss_pred CEEEEEeC
Confidence 99999875
|
In E. coli, this protein flanks the DNA repair protein MutY, also called micA. |
| >TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00028 Score=60.78 Aligned_cols=87 Identities=15% Similarity=0.052 Sum_probs=56.2
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccC-CCCCCCcccEEEecCcccccccChHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
.|.++.++..+.-. ..+...|.++.+++.|+++ +.+ ..+...+... +++..++||.|++..+..+. ..+
T Consensus 30 ~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~----~~~ 104 (124)
T TIGR02469 30 SGSITIEAARLVPN-GRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPDRVFIGGSGGLL----QEI 104 (124)
T ss_pred CCHHHHHHHHHCCC-ceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCCEEEECCcchhH----HHH
Confidence 34444455544211 2334447778888877643 333 4555566544 55555799999997665332 249
Q ss_pred HHHHhhcccCCcEEEEec
Q 009719 217 LIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~ 234 (527)
+.++.|+|||||+|+++.
T Consensus 105 l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 105 LEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred HHHHHHHcCCCCEEEEEe
Confidence 999999999999999875
|
This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL. |
| >PLN03075 nicotianamine synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00029 Score=73.02 Aligned_cols=76 Identities=14% Similarity=0.230 Sum_probs=57.4
Q ss_pred eeccCcChHHHHHHHHHc-----CC--CcEEeeccccCCCCCCCcccEEEecCcccccc-cChHHHHHHHhhcccCCcEE
Q 009719 159 SFAPRDSHKAQIQFALER-----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFT-AYNATYLIEVDRLLRPGGYL 230 (527)
Q Consensus 159 siAp~D~seaqvq~A~eR-----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~-d~~~~aL~Ei~RVLRPGG~l 230 (527)
.|...|.++++++.|++. ++ .+.|.++|+..++-..+.||+|.|. ++++|. .+...+|..+.|+|||||+|
T Consensus 151 ~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF~~-ALi~~dk~~k~~vL~~l~~~LkPGG~L 229 (296)
T PLN03075 151 SFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVFLA-ALVGMDKEEKVKVIEHLGKHMAPGALL 229 (296)
T ss_pred EEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEEEe-cccccccccHHHHHHHHHHhcCCCcEE
Confidence 344458888888888753 22 2567778876664345789999999 999994 33345999999999999999
Q ss_pred EEecC
Q 009719 231 VISGP 235 (527)
Q Consensus 231 viS~p 235 (527)
++...
T Consensus 230 vlr~~ 234 (296)
T PLN03075 230 MLRSA 234 (296)
T ss_pred EEecc
Confidence 99763
|
|
| >TIGR00406 prmA ribosomal protein L11 methyltransferase | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00013 Score=74.55 Aligned_cols=114 Identities=12% Similarity=0.096 Sum_probs=66.8
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cccccccccCCCCCCC-CCccchhhhcCccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLIGVYHDWCEPFSTY-PRTYDLIHVSGIESLI 448 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLiG~~hdwce~fstY-PrtyDLiHa~~~fs~~ 448 (527)
.+|||+|||.|.++.++...+.- .|+-+|-. ..+..+.++ |+-......+...... +..||+|.|+.+...
T Consensus 161 ~~VLDvGcGsG~lai~aa~~g~~--~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~~~~~~~~~fDlVvan~~~~~- 237 (288)
T TIGR00406 161 KNVIDVGCGSGILSIAALKLGAA--KVVGIDIDPLAVESARKNAELNQVSDRLQVKLIYLEQPIEGKADVIVANILAEV- 237 (288)
T ss_pred CEEEEeCCChhHHHHHHHHcCCC--eEEEEECCHHHHHHHHHHHHHcCCCcceEEEecccccccCCCceEEEEecCHHH-
Confidence 68999999999987766544321 22222322 233333322 2211112222212222 468999998644332
Q ss_pred cCCCCCCCCCcccccceeecccccCCcEEEEeCC-HHHHHHHHHHHhcCCceeEEe
Q 009719 449 KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-PEVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 449 ~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-~~~~~~i~~i~~~l~W~~~~~ 503 (527)
+..++-++-|+|+|||++++++- .+-.+++.+.+++. |+....
T Consensus 238 -----------l~~ll~~~~~~LkpgG~li~sgi~~~~~~~v~~~~~~~-f~~~~~ 281 (288)
T TIGR00406 238 -----------IKELYPQFSRLVKPGGWLILSGILETQAQSVCDAYEQG-FTVVEI 281 (288)
T ss_pred -----------HHHHHHHHHHHcCCCcEEEEEeCcHhHHHHHHHHHHcc-CceeeE
Confidence 24578899999999999999974 33455666666665 766543
|
Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis. |
| >TIGR01177 conserved hypothetical protein TIGR01177 | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00051 Score=71.31 Aligned_cols=77 Identities=21% Similarity=0.181 Sum_probs=54.8
Q ss_pred eccCcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecC--c---c--cccc-cChHHHHHHHhhcccC
Q 009719 160 FAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSR--C---L--IPFT-AYNATYLIEVDRLLRP 226 (527)
Q Consensus 160 iAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~--~---l--~hw~-d~~~~aL~Ei~RVLRP 226 (527)
+...|.++.|++.|+++ |+. ..+..+|+.++|+++++||+|++.- . . .+.. +....+|.|+.|+|||
T Consensus 207 v~g~Di~~~~~~~a~~nl~~~g~~~i~~~~~D~~~l~~~~~~~D~Iv~dPPyg~~~~~~~~~~~~l~~~~l~~~~r~Lk~ 286 (329)
T TIGR01177 207 VIGCDIDWKMVAGARINLEHYGIEDFFVKRGDATKLPLSSESVDAIATDPPYGRSTTAAGDGLESLYERSLEEFHEVLKS 286 (329)
T ss_pred EEEEcCCHHHHHHHHHHHHHhCCCCCeEEecchhcCCcccCCCCEEEECCCCcCcccccCCchHHHHHHHHHHHHHHccC
Confidence 33447778888777643 444 3567789999999999999999851 1 1 1111 1123499999999999
Q ss_pred CcEEEEecCC
Q 009719 227 GGYLVISGPP 236 (527)
Q Consensus 227 GG~lviS~pp 236 (527)
||++++..|.
T Consensus 287 gG~lv~~~~~ 296 (329)
T TIGR01177 287 EGWIVYAVPT 296 (329)
T ss_pred CcEEEEEEcC
Confidence 9999998873
|
This family is found exclusively in the Archaea. |
| >TIGR00477 tehB tellurite resistance protein TehB | Back alignment and domain information |
|---|
Probab=97.36 E-value=4.9e-05 Score=73.10 Aligned_cols=93 Identities=14% Similarity=0.187 Sum_probs=58.5
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHh----hhcccc--ccccccCCCCCCCCCccchhhhcCcccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVI----YDRGLI--GVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi----~eRGLi--G~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
.+|||+|||.|.++..|.++.- .|.-.|.. +.+..+ -+.|+- ....|.. .++ ++.+||+|-+..+|..
T Consensus 32 ~~vLDiGcG~G~~a~~la~~g~---~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~~d~~-~~~-~~~~fD~I~~~~~~~~ 106 (195)
T TIGR00477 32 CKTLDLGCGQGRNSLYLSLAGY---DVRAWDHNPASIASVLDMKARENLPLRTDAYDIN-AAA-LNEDYDFIFSTVVFMF 106 (195)
T ss_pred CcEEEeCCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHhCCCceeEeccch-hcc-ccCCCCEEEEeccccc
Confidence 4899999999999988876542 33334433 333332 233441 1112221 122 3568999998877764
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEE
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVV 479 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~ii 479 (527)
.. .-.+..++-++.|.|+|||++++
T Consensus 107 ~~-------~~~~~~~l~~~~~~LkpgG~lli 131 (195)
T TIGR00477 107 LQ-------AGRVPEIIANMQAHTRPGGYNLI 131 (195)
T ss_pred CC-------HHHHHHHHHHHHHHhCCCcEEEE
Confidence 32 22456889999999999998544
|
Part of a tellurite-reducing operon tehA and tehB |
| >TIGR02021 BchM-ChlM magnesium protoporphyrin O-methyltransferase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00022 Score=69.08 Aligned_cols=86 Identities=19% Similarity=0.180 Sum_probs=62.9
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC----C--CcEEeeccccCCCCCCCcccEEEecCcccccccC-hHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG----I--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY-NAT 215 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg----~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~-~~~ 215 (527)
.|.++.+|.+++..+ ...|.++.+++.|+++. . .+.+.+++.+.++ ++||+|+++.+++|++.. ...
T Consensus 66 ~G~~~~~la~~~~~v---~gvD~s~~~i~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~fD~ii~~~~l~~~~~~~~~~ 139 (219)
T TIGR02021 66 TGLLSIELAKRGAIV---KAVDISEQMVQMARNRAQGRDVAGNVEFEVNDLLSLC---GEFDIVVCMDVLIHYPASDMAK 139 (219)
T ss_pred CCHHHHHHHHCCCEE---EEEECCHHHHHHHHHHHHhcCCCCceEEEECChhhCC---CCcCEEEEhhHHHhCCHHHHHH
Confidence 455555666665533 34488889999888752 2 3556777887776 899999999999888643 345
Q ss_pred HHHHHhhcccCCcEEEEec
Q 009719 216 YLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~ 234 (527)
++.++.|++++|+++.++.
T Consensus 140 ~l~~i~~~~~~~~~i~~~~ 158 (219)
T TIGR02021 140 ALGHLASLTKERVIFTFAP 158 (219)
T ss_pred HHHHHHHHhCCCEEEEECC
Confidence 8999999999887777653
|
This model represents the S-adenosylmethionine-dependent O-methyltransferase responsible for methylation of magnesium protoporphyrin IX. This step is essentiasl for the biosynthesis of both chlorophyll and bacteriochlorophyll. This model encompasses two closely related clades, from cyanobacteria (and plants) where it is called ChlM and other photosynthetic bacteria where it is known as BchM. |
| >TIGR00138 gidB 16S rRNA methyltransferase GidB | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00096 Score=63.95 Aligned_cols=66 Identities=21% Similarity=0.316 Sum_probs=47.3
Q ss_pred cChHHHHHHHHH----cCCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALE----RGIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~e----Rg~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++.|++.|++ .++. ..+..++++.++. +++||+|+|.. +.+ ... .+.++.|+|||||++++...
T Consensus 73 D~s~~~~~~a~~~~~~~~~~~i~~i~~d~~~~~~-~~~fD~I~s~~-~~~---~~~-~~~~~~~~LkpgG~lvi~~~ 143 (181)
T TIGR00138 73 ESNHKKVAFLREVKAELGLNNVEIVNGRAEDFQH-EEQFDVITSRA-LAS---LNV-LLELTLNLLKVGGYFLAYKG 143 (181)
T ss_pred eCcHHHHHHHHHHHHHhCCCCeEEEecchhhccc-cCCccEEEehh-hhC---HHH-HHHHHHHhcCCCCEEEEEcC
Confidence 666777666543 3553 5667788888753 68999998864 332 233 88899999999999998754
|
GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA. |
| >PF05148 Methyltransf_8: Hypothetical methyltransferase; InterPro: IPR007823 This family consists of uncharacterised eukaryotic proteins which are related to S-adenosyl-L-methionine-dependent methyltransferases | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00016 Score=71.64 Aligned_cols=77 Identities=21% Similarity=0.349 Sum_probs=47.2
Q ss_pred EeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEe
Q 009719 182 VAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELI 261 (527)
Q Consensus 182 ~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~ 261 (527)
+.++|...+|.+|++.|+|++.+.|+- .+-..+|.|.+|||||||.|.|..--..+. + -+...+..+.+-+++.
T Consensus 108 Vtacdia~vPL~~~svDv~VfcLSLMG--Tn~~~fi~EA~RvLK~~G~L~IAEV~SRf~-~---~~~F~~~~~~~GF~~~ 181 (219)
T PF05148_consen 108 VTACDIANVPLEDESVDVAVFCLSLMG--TNWPDFIREANRVLKPGGILKIAEVKSRFE-N---VKQFIKALKKLGFKLK 181 (219)
T ss_dssp EEES-TTS-S--TT-EEEEEEES---S--S-HHHHHHHHHHHEEEEEEEEEEEEGGG-S-----HHHHHHHHHCTTEEEE
T ss_pred EEEecCccCcCCCCceeEEEEEhhhhC--CCcHHHHHHHHheeccCcEEEEEEecccCc-C---HHHHHHHHHHCCCeEE
Confidence 556788999999999999998877754 222239999999999999999987522222 1 1222334466677777
Q ss_pred eee
Q 009719 262 AVD 264 (527)
Q Consensus 262 ~~~ 264 (527)
.++
T Consensus 182 ~~d 184 (219)
T PF05148_consen 182 SKD 184 (219)
T ss_dssp EEE
T ss_pred ecc
Confidence 653
|
; GO: 0008168 methyltransferase activity; PDB: 2ZFU_B. |
| >TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase | Back alignment and domain information |
|---|
Probab=97.34 E-value=9.1e-05 Score=71.86 Aligned_cols=95 Identities=20% Similarity=0.301 Sum_probs=56.6
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCCCchhHhh----hccc--cccccccCCCCCCCC-CccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKSSTLSVIY----DRGL--IGVYHDWCEPFSTYP-RTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~ntl~vi~----eRGL--iG~~hdwce~fstYP-rtyDLiHa~~~ 444 (527)
.+|||+|||.|.++..|.+. ..-|..+-.. ++.+..+- +.++ +-+++.=.+.++ +| .+||+|++...
T Consensus 47 ~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~V~~~~~ 123 (231)
T TIGR02752 47 TSALDVCCGTADWSIALAEAVGPEGHVIGLDFS--ENMLSVGRQKVKDAGLHNVELVHGNAMELP-FDDNSFDYVTIGFG 123 (231)
T ss_pred CEEEEeCCCcCHHHHHHHHHhCCCCEEEEEECC--HHHHHHHHHHHHhcCCCceEEEEechhcCC-CCCCCccEEEEecc
Confidence 47999999999999888543 1223333221 13232222 2232 111211112222 34 79999998766
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+.... +...+|-|+-|+|+|||.+++.+
T Consensus 124 l~~~~---------~~~~~l~~~~~~Lk~gG~l~~~~ 151 (231)
T TIGR02752 124 LRNVP---------DYMQVLREMYRVVKPGGKVVCLE 151 (231)
T ss_pred cccCC---------CHHHHHHHHHHHcCcCeEEEEEE
Confidence 65332 23567889999999999999875
|
MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species. |
| >TIGR02081 metW methionine biosynthesis protein MetW | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00031 Score=67.08 Aligned_cols=67 Identities=27% Similarity=0.276 Sum_probs=51.0
Q ss_pred CcChHHHHHHHHHcCCCcEEeeccccC-C-CCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 163 RDSHKAQIQFALERGIPAFVAMLGTRR-L-PFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 163 ~D~seaqvq~A~eRg~pa~~~v~dae~-L-PFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.|.++++++.|.++++. +.+++++. + ++++++||+|+|+.+++|..+... +|+|+.|++++ .+++.|
T Consensus 42 iD~s~~~i~~a~~~~~~--~~~~d~~~~l~~~~~~sfD~Vi~~~~l~~~~d~~~-~l~e~~r~~~~---~ii~~p 110 (194)
T TIGR02081 42 IEIDQDGVLACVARGVN--VIQGDLDEGLEAFPDKSFDYVILSQTLQATRNPEE-ILDEMLRVGRH---AIVSFP 110 (194)
T ss_pred EeCCHHHHHHHHHcCCe--EEEEEhhhcccccCCCCcCEEEEhhHhHcCcCHHH-HHHHHHHhCCe---EEEEcC
Confidence 37788999999877653 44456544 6 588999999999999988876555 99999988664 566655
|
This protein is found alongside MetX, of the enzyme that acylates homoserine as a first step toward methionine biosynthesis, in many species. It appears to act in methionine biosynthesis but is not fully characterized. |
| >TIGR00537 hemK_rel_arch HemK-related putative methylase | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00034 Score=65.79 Aligned_cols=123 Identities=11% Similarity=0.082 Sum_probs=72.6
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccccc--cccccCCCCCCCCCccchhhhcCcccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGLIG--VYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGLiG--~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
.+|||+|||.|.++.++....- .|+-.|-. ..+..+-+ .|+-. +.-|+.+. .+.+||+|-++-.|..
T Consensus 21 ~~vLdlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~---~~~~fD~Vi~n~p~~~ 94 (179)
T TIGR00537 21 DDVLEIGAGTGLVAIRLKGKGK---CILTTDINPFAVKELRENAKLNNVGLDVVMTDLFKG---VRGKFDVILFNPPYLP 94 (179)
T ss_pred CeEEEeCCChhHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHHcCCceEEEEcccccc---cCCcccEEEECCCCCC
Confidence 4699999999999988876543 22323322 32222211 22211 12243332 2469999988766543
Q ss_pred ccCCCC------------CCCCCcccccceeecccccCCcEEEEeCCHHH-HHHHHHHHhcCCceeEEe
Q 009719 448 IKNPGS------------NKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEV-IDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 448 ~~~~~~------------~~~rC~~~~illEmDRILRP~G~~iird~~~~-~~~i~~i~~~l~W~~~~~ 503 (527)
..+... ...+..+..+|-|+.|+|+|||.+++-+.... ..++.++++..-++....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~~~~~~~~~~~~~~~~~~l~~~gf~~~~~ 163 (179)
T TIGR00537 95 LEDDLRRGDWLDVAIDGGKDGRKVIDRFLDELPEILKEGGRVQLIQSSLNGEPDTFDKLDERGFRYEIV 163 (179)
T ss_pred CcchhcccchhhhhhhcCCchHHHHHHHHHhHHHhhCCCCEEEEEEeccCChHHHHHHHHhCCCeEEEE
Confidence 321000 01123356789999999999999988764433 556666666677777665
|
The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes. |
| >PTZ00098 phosphoethanolamine N-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=9.1e-05 Score=74.66 Aligned_cols=94 Identities=17% Similarity=0.297 Sum_probs=58.2
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCCCchhHhhhcc----ccccc-cccCCCCCCCC-CccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKSSTLSVIYDRG----LIGVY-HDWCEPFSTYP-RTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~ntl~vi~eRG----LiG~~-hdwce~fstYP-rtyDLiHa~~~f 445 (527)
..|||+|||+|+++..|... .|..+.+. ++.+..+-+|- -+-.. .|.. .. .|| .+||+|++...+
T Consensus 54 ~~VLDiGcG~G~~a~~la~~~~~~v~giD~s----~~~~~~a~~~~~~~~~i~~~~~D~~-~~-~~~~~~FD~V~s~~~l 127 (263)
T PTZ00098 54 SKVLDIGSGLGGGCKYINEKYGAHVHGVDIC----EKMVNIAKLRNSDKNKIEFEANDIL-KK-DFPENTFDMIYSRDAI 127 (263)
T ss_pred CEEEEEcCCCChhhHHHHhhcCCEEEEEECC----HHHHHHHHHHcCcCCceEEEECCcc-cC-CCCCCCeEEEEEhhhH
Confidence 46999999999998888543 23333332 23334443331 11111 1111 11 245 799999997665
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
-++. .-+...+|=|+-|+|+|||++++.|
T Consensus 128 ~h~~-------~~d~~~~l~~i~r~LkPGG~lvi~d 156 (263)
T PTZ00098 128 LHLS-------YADKKKLFEKCYKWLKPNGILLITD 156 (263)
T ss_pred HhCC-------HHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 4431 1234678999999999999999986
|
|
| >TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00058 Score=67.21 Aligned_cols=84 Identities=15% Similarity=0.074 Sum_probs=60.0
Q ss_pred cccccccCCeeEEeeccCcChHHHHHHH-HHcCC----------------CcEEeeccccCCCCC-CCcccEEEecCccc
Q 009719 146 FGGSMLSENILTLSFAPRDSHKAQIQFA-LERGI----------------PAFVAMLGTRRLPFP-AFSFDIVHCSRCLI 207 (527)
Q Consensus 146 fga~Ll~r~V~~msiAp~D~seaqvq~A-~eRg~----------------pa~~~v~dae~LPFp-D~SFDlV~cs~~l~ 207 (527)
-+.+|.++|-.+..+ |.|+..++.| .+.++ .+.+.++|...++.. ...||.|.-..+++
T Consensus 48 da~~LA~~G~~V~gv---D~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~i~D~~~~~ 124 (213)
T TIGR03840 48 DLAWLAEQGHRVLGV---ELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAADLGPVDAVYDRAALI 124 (213)
T ss_pred HHHHHHhCCCeEEEE---eCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcccCCCcCEEEechhhc
Confidence 356777886654444 6677777764 33333 345677888777653 46799999888888
Q ss_pred ccccCh-HHHHHHHhhcccCCcEEEE
Q 009719 208 PFTAYN-ATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 208 hw~d~~-~~aL~Ei~RVLRPGG~lvi 232 (527)
|++... ..++..+.++|||||++++
T Consensus 125 ~l~~~~R~~~~~~l~~lLkpgG~~ll 150 (213)
T TIGR03840 125 ALPEEMRQRYAAHLLALLPPGARQLL 150 (213)
T ss_pred cCCHHHHHHHHHHHHHHcCCCCeEEE
Confidence 987654 3599999999999997555
|
Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity. |
| >PRK11207 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=5e-05 Score=73.13 Aligned_cols=93 Identities=17% Similarity=0.257 Sum_probs=59.3
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhH----hhhcccc---ccccccCCCCCCCCCccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSV----IYDRGLI---GVYHDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~v----i~eRGLi---G~~hdwce~fstYPrtyDLiHa~~~fs 446 (527)
-+|||+|||.|.++..|.++.. +|.-.|.. +.+.. +-++|+- ....|..+ + .++.+||+|-+..+|-
T Consensus 32 ~~vLDiGcG~G~~a~~La~~g~---~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~-~-~~~~~fD~I~~~~~~~ 106 (197)
T PRK11207 32 GKTLDLGCGNGRNSLYLAANGF---DVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNN-L-TFDGEYDFILSTVVLM 106 (197)
T ss_pred CcEEEECCCCCHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhh-C-CcCCCcCEEEEecchh
Confidence 4799999999999999987643 22222322 22222 2334442 22234332 2 2467899999987764
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEE
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVV 479 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~ii 479 (527)
.. +.-....++-+|-|.|+|||++++
T Consensus 107 ~~-------~~~~~~~~l~~i~~~LkpgG~~~~ 132 (197)
T PRK11207 107 FL-------EAKTIPGLIANMQRCTKPGGYNLI 132 (197)
T ss_pred hC-------CHHHHHHHHHHHHHHcCCCcEEEE
Confidence 32 223456899999999999999654
|
|
| >KOG1331 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00015 Score=74.48 Aligned_cols=100 Identities=26% Similarity=0.283 Sum_probs=70.9
Q ss_pred CCCCCccchh------------hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEE
Q 009719 133 PVPWPESLSK------------VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIV 200 (527)
Q Consensus 133 P~~WP~Srd~------------vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV 200 (527)
+-+||+=|-. +|+.-+..+..+-. +.+.+-|.+...+..|++.|.. ..+.+|+..+||++.+||.+
T Consensus 30 ~~~Wp~v~qfl~~~~~gsv~~d~gCGngky~~~~p~-~~~ig~D~c~~l~~~ak~~~~~-~~~~ad~l~~p~~~~s~d~~ 107 (293)
T KOG1331|consen 30 AAPWPMVRQFLDSQPTGSVGLDVGCGNGKYLGVNPL-CLIIGCDLCTGLLGGAKRSGGD-NVCRADALKLPFREESFDAA 107 (293)
T ss_pred cCccHHHHHHHhccCCcceeeecccCCcccCcCCCc-ceeeecchhhhhccccccCCCc-eeehhhhhcCCCCCCccccc
Confidence 4567765544 45544444444421 2344457776666667655543 56778999999999999999
Q ss_pred EecCcccccccCh--HHHHHHHhhcccCCcEEEEec
Q 009719 201 HCSRCLIPFTAYN--ATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 201 ~cs~~l~hw~d~~--~~aL~Ei~RVLRPGG~lviS~ 234 (527)
+...++|||.... ..++.|+.|+|||||...+..
T Consensus 108 lsiavihhlsT~~RR~~~l~e~~r~lrpgg~~lvyv 143 (293)
T KOG1331|consen 108 LSIAVIHHLSTRERRERALEELLRVLRPGGNALVYV 143 (293)
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhcCCCceEEEE
Confidence 9999999987554 359999999999999976644
|
|
| >PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00023 Score=67.39 Aligned_cols=110 Identities=18% Similarity=0.189 Sum_probs=65.5
Q ss_pred eeeEeecCCCccchhhhccCC-C-eeEEEecCCCCCCchhHhh----hccc--cccccccCCCCCCCCCccchhhhcCcc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-P-VWVMNVVPARKSSTLSVIY----DRGL--IGVYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~-VwvMnvvp~~~~ntl~vi~----eRGL--iG~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
-.+|+|+|||.|.++.++... | .=|..+-... ..+..+- ..|+ +-++. -.....++..||+|.+++..
T Consensus 32 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~--~~~~~a~~n~~~~~~~~i~~~~--~d~~~~~~~~~D~v~~~~~~ 107 (187)
T PRK08287 32 AKHLIDVGAGTGSVSIEAALQFPSLQVTAIERNP--DALRLIKENRQRFGCGNIDIIP--GEAPIELPGKADAIFIGGSG 107 (187)
T ss_pred CCEEEEECCcCCHHHHHHHHHCCCCEEEEEECCH--HHHHHHHHHHHHhCCCCeEEEe--cCchhhcCcCCCEEEECCCc
Confidence 357999999999998777442 2 2222222211 2222221 1232 11111 01112345789998875332
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC-CHHHHHHHHHHHhcCCce
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDKVSRIANTVRWT 499 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~i~~i~~~l~W~ 499 (527)
..+..++-++-|+|+|||++++.. ..+...++.+++++..++
T Consensus 108 ------------~~~~~~l~~~~~~Lk~gG~lv~~~~~~~~~~~~~~~l~~~g~~ 150 (187)
T PRK08287 108 ------------GNLTAIIDWSLAHLHPGGRLVLTFILLENLHSALAHLEKCGVS 150 (187)
T ss_pred ------------cCHHHHHHHHHHhcCCCeEEEEEEecHhhHHHHHHHHHHCCCC
Confidence 235668888999999999999976 455667777788777774
|
|
| >PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A | Back alignment and domain information |
|---|
Probab=97.25 E-value=3.5e-05 Score=65.80 Aligned_cols=98 Identities=20% Similarity=0.305 Sum_probs=58.1
Q ss_pred eeEeecCCCccchhhhccC--CCeeEEEecCCCCCCchhHhhh----ccc---ccc-ccccCCCCCCCCCccchhhhcC-
Q 009719 375 RNIMDMNAFFGGFAAALTS--DPVWVMNVVPARKSSTLSVIYD----RGL---IGV-YHDWCEPFSTYPRTYDLIHVSG- 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~--~~VwvMnvvp~~~~ntl~vi~e----RGL---iG~-~hdwce~fstYPrtyDLiHa~~- 443 (527)
..|||+|||.|.++.+|.+ ...=|..|=+.. ..+..+-+ .++ |-+ ..|+... ...+..||+|.+..
T Consensus 3 ~~vLDlGcG~G~~~~~l~~~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~v~~~~~ 79 (112)
T PF12847_consen 3 GRVLDLGCGTGRLSIALARLFPGARVVGVDISP--EMLEIARERAAEEGLSDRITFVQGDAEFD-PDFLEPFDLVICSGF 79 (112)
T ss_dssp CEEEEETTTTSHHHHHHHHHHTTSEEEEEESSH--HHHHHHHHHHHHTTTTTTEEEEESCCHGG-TTTSSCEEEEEECSG
T ss_pred CEEEEEcCcCCHHHHHHHhcCCCCEEEEEeCCH--HHHHHHHHHHHhcCCCCCeEEEECccccC-cccCCCCCEEEECCC
Confidence 3689999999999999987 444444443322 22333222 233 111 1233111 33455699999998
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.+..+. +.-....+|=++-+.|+|||+++|++
T Consensus 80 ~~~~~~------~~~~~~~~l~~~~~~L~pgG~lvi~~ 111 (112)
T PF12847_consen 80 TLHFLL------PLDERRRVLERIRRLLKPGGRLVINT 111 (112)
T ss_dssp SGGGCC------HHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccc------chhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 222121 11223456778999999999999974
|
... |
| >PRK11088 rrmA 23S rRNA methyltransferase A; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00019 Score=72.34 Aligned_cols=101 Identities=14% Similarity=0.166 Sum_probs=59.3
Q ss_pred eeeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhhccc-cccc-cccCCCCCCCC-CccchhhhcCcccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYDRGL-IGVY-HDWCEPFSTYP-RTYDLIHVSGIESL 447 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~eRGL-iG~~-hdwce~fstYP-rtyDLiHa~~~fs~ 447 (527)
-.+|||+|||.|.+++.|.+. +.--.+|+-.|-. +.+..+-+|.- +... .|-. .++ ++ .+||+|.+. |+
T Consensus 86 ~~~vLDiGcG~G~~~~~l~~~~~~~~~~~v~giD~s~~~l~~A~~~~~~~~~~~~d~~-~lp-~~~~sfD~I~~~--~~- 160 (272)
T PRK11088 86 ATALLDIGCGEGYYTHALADALPEITTMQLFGLDISKVAIKYAAKRYPQVTFCVASSH-RLP-FADQSLDAIIRI--YA- 160 (272)
T ss_pred CCeEEEECCcCCHHHHHHHHhcccccCCeEEEECCCHHHHHHHHHhCCCCeEEEeecc-cCC-CcCCceeEEEEe--cC-
Confidence 356999999999999888542 1101234444443 66666655531 1111 1211 222 33 789999753 32
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeCCH-HHHHHHHHH
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP-EVIDKVSRI 492 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~-~~~~~i~~i 492 (527)
...+-|+.|+|+|||++|+.... +.+.+++.+
T Consensus 161 -------------~~~~~e~~rvLkpgG~li~~~p~~~~l~el~~~ 193 (272)
T PRK11088 161 -------------PCKAEELARVVKPGGIVITVTPGPRHLFELKGL 193 (272)
T ss_pred -------------CCCHHHHHhhccCCCEEEEEeCCCcchHHHHHH
Confidence 12356899999999999988532 334444443
|
|
| >TIGR00138 gidB 16S rRNA methyltransferase GidB | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00014 Score=69.71 Aligned_cols=131 Identities=15% Similarity=0.199 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhcc--CCCeeEEEecCCCCCCchh----Hhhhccc--ccccc
Q 009719 352 RRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALT--SDPVWVMNVVPARKSSTLS----VIYDRGL--IGVYH 423 (527)
Q Consensus 352 ~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~--~~~VwvMnvvp~~~~ntl~----vi~eRGL--iG~~h 423 (527)
..|++.+-.=..++. .+. =.+|+|+|||.|.++..|. ....-|.-|=+.. +.+. .+-+.|+ +-+.+
T Consensus 25 ~~~~~~~~d~i~~~~-~~~---~~~vLDiGcGtG~~s~~la~~~~~~~V~~iD~s~--~~~~~a~~~~~~~~~~~i~~i~ 98 (181)
T TIGR00138 25 EIWERHILDSLKLLE-YLD---GKKVIDIGSGAGFPGIPLAIARPELKLTLLESNH--KKVAFLREVKAELGLNNVEIVN 98 (181)
T ss_pred HHHHHHHHHHHHHHH-hcC---CCeEEEecCCCCccHHHHHHHCCCCeEEEEeCcH--HHHHHHHHHHHHhCCCCeEEEe
Confidence 467766644332222 233 2589999999998776553 2221222222111 2222 1223344 22221
Q ss_pred -ccCCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCC-ceeE
Q 009719 424 -DWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVR-WTAA 501 (527)
Q Consensus 424 -dwce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~-W~~~ 501 (527)
|. +.+. ...+||+|-+.. +. .+.+++-++.|+|+|||.+++........++..+.+.++ |...
T Consensus 99 ~d~-~~~~-~~~~fD~I~s~~-~~------------~~~~~~~~~~~~LkpgG~lvi~~~~~~~~~~~~~~e~~~~~~~~ 163 (181)
T TIGR00138 99 GRA-EDFQ-HEEQFDVITSRA-LA------------SLNVLLELTLNLLKVGGYFLAYKGKKYLDEIEEAKRKCQVLGVE 163 (181)
T ss_pred cch-hhcc-ccCCccEEEehh-hh------------CHHHHHHHHHHhcCCCCEEEEEcCCCcHHHHHHHHHhhhhcCce
Confidence 22 1121 347999997753 22 245677788999999999999987666777777766543 4444
Q ss_pred Ee
Q 009719 502 VH 503 (527)
Q Consensus 502 ~~ 503 (527)
..
T Consensus 164 ~~ 165 (181)
T TIGR00138 164 PL 165 (181)
T ss_pred Ee
Confidence 43
|
GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA. |
| >PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00017 Score=69.84 Aligned_cols=125 Identities=12% Similarity=0.110 Sum_probs=73.4
Q ss_pred CeeeEeecCCCccchhhhccCC----CeeEEEecCCCCCCchhHhh----hccc--cccc-cccCCCCCC-C-CCccchh
Q 009719 373 AIRNIMDMNAFFGGFAAALTSD----PVWVMNVVPARKSSTLSVIY----DRGL--IGVY-HDWCEPFST-Y-PRTYDLI 439 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~----~VwvMnvvp~~~~ntl~vi~----eRGL--iG~~-hdwce~fst-Y-PrtyDLi 439 (527)
.-.+|||+|||.|.++..|... .|+-+-..| +.+..+- +.|+ +-+. .|..+.++. + +.+||+|
T Consensus 40 ~~~~VLDiGcGtG~~~~~la~~~p~~~v~gVD~s~----~~i~~a~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~D~V 115 (202)
T PRK00121 40 DAPIHLEIGFGKGEFLVEMAKANPDINFIGIEVHE----PGVGKALKKIEEEGLTNLRLLCGDAVEVLLDMFPDGSLDRI 115 (202)
T ss_pred CCCeEEEEccCCCHHHHHHHHHCCCccEEEEEech----HHHHHHHHHHHHcCCCCEEEEecCHHHHHHHHcCccccceE
Confidence 3478999999999998888543 233333322 2222221 1233 1111 222123331 4 4789998
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe-CCHHHHHHHHHHHhcCCceeEE
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR-DSPEVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir-d~~~~~~~i~~i~~~l~W~~~~ 502 (527)
-+.... .|........+.....+|-|+.|+|+|||.++|. +.......+.+.+..--|.+.+
T Consensus 116 ~~~~~~-p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~g~~~~~ 178 (202)
T PRK00121 116 YLNFPD-PWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFATDWEGYAEYMLEVLSAEGGFLVS 178 (202)
T ss_pred EEECCC-CCCCccccccccCCHHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHhCcccccc
Confidence 764322 2321011122334577899999999999999997 5666777777777777787764
|
|
| >TIGR00406 prmA ribosomal protein L11 methyltransferase | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.001 Score=68.02 Aligned_cols=72 Identities=15% Similarity=0.126 Sum_probs=48.3
Q ss_pred eccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 160 FAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 160 iAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+...|.++.+++.|+++ ++...+.......+++.+++||+|+|.....+ ...++.++.|+|||||+|++|+.
T Consensus 185 V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~~~~~~~~~fDlVvan~~~~~----l~~ll~~~~~~LkpgG~li~sgi 260 (288)
T TIGR00406 185 VVGIDIDPLAVESARKNAELNQVSDRLQVKLIYLEQPIEGKADVIVANILAEV----IKELYPQFSRLVKPGGWLILSGI 260 (288)
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCcceEEEecccccccCCCceEEEEecCHHH----HHHHHHHHHHHcCCCcEEEEEeC
Confidence 33447788888888764 33322211111134566789999999754322 22489999999999999999986
|
Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis. |
| >TIGR02072 BioC biotin biosynthesis protein BioC | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00026 Score=67.75 Aligned_cols=93 Identities=17% Similarity=0.220 Sum_probs=57.7
Q ss_pred eeEeecCCCccchhhhccCCC----eeEEEecCCCCCCchhHhhhcc---ccccccccCCCCCCCCCccchhhhcCcccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDP----VWVMNVVPARKSSTLSVIYDRG---LIGVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~----VwvMnvvp~~~~ntl~vi~eRG---LiG~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
..|||+|||.|.|...|.+.. |..+-+.| ..+...-++. +.-+..|. +.++..+.+||+|.+..++..
T Consensus 36 ~~vLDlG~G~G~~~~~l~~~~~~~~~~~~D~~~----~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~vi~~~~l~~ 110 (240)
T TIGR02072 36 ASVLDIGCGTGYLTRALLKRFPQAEFIALDISA----GMLAQAKTKLSENVQFICGDA-EKLPLEDSSFDLIVSNLALQW 110 (240)
T ss_pred CeEEEECCCccHHHHHHHHhCCCCcEEEEeChH----HHHHHHHHhcCCCCeEEecch-hhCCCCCCceeEEEEhhhhhh
Confidence 579999999999998886542 22222111 2222222221 11111121 223333578999999887753
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.. +...+|-++.|+|+|||++++..
T Consensus 111 ~~---------~~~~~l~~~~~~L~~~G~l~~~~ 135 (240)
T TIGR02072 111 CD---------DLSQALSELARVLKPGGLLAFST 135 (240)
T ss_pred cc---------CHHHHHHHHHHHcCCCcEEEEEe
Confidence 32 34679999999999999999974
|
This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, is believed to carry out an enzymatic step prior to the formation of pimeloyl-CoA (although attribution of this annotation is not traceable). The enzyme appears related to methyltransferases by homology. |
| >KOG1975 consensus mRNA cap methyltransferase [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.00054 Score=71.82 Aligned_cols=91 Identities=24% Similarity=0.299 Sum_probs=63.9
Q ss_pred ccccccCCeeEE-eeccCcChHHHHHHHHHcC-----------CCcEEeecc------ccCCCCCCCcccEEEecCcccc
Q 009719 147 GGSMLSENILTL-SFAPRDSHKAQIQFALERG-----------IPAFVAMLG------TRRLPFPAFSFDIVHCSRCLIP 208 (527)
Q Consensus 147 ga~Ll~r~V~~m-siAp~D~seaqvq~A~eRg-----------~pa~~~v~d------ae~LPFpD~SFDlV~cs~~l~h 208 (527)
||-|++-+...+ .+...|+.+.-|+.|++|. .++.|..+| ...++++|.+||+|-|.+|+|.
T Consensus 129 GGDLlKw~kAgI~~~igiDIAevSI~qa~~RYrdm~~r~~~~~f~a~f~~~Dc~~~~l~d~~e~~dp~fDivScQF~~HY 208 (389)
T KOG1975|consen 129 GGDLLKWDKAGIGEYIGIDIAEVSINQARKRYRDMKNRFKKFIFTAVFIAADCFKERLMDLLEFKDPRFDIVSCQFAFHY 208 (389)
T ss_pred cccHhHhhhhcccceEeeehhhccHHHHHHHHHHHHhhhhcccceeEEEEeccchhHHHHhccCCCCCcceeeeeeeEee
Confidence 556665433322 2455577777788887651 245666665 2557999999999999999855
Q ss_pred cccCh---HHHHHHHhhcccCCcEEEEecCCC
Q 009719 209 FTAYN---ATYLIEVDRLLRPGGYLVISGPPV 237 (527)
Q Consensus 209 w~d~~---~~aL~Ei~RVLRPGG~lviS~pp~ 237 (527)
=.... ..+|+-+.+-|||||+|+-+.|..
T Consensus 209 aFetee~ar~~l~Nva~~LkpGG~FIgTiPds 240 (389)
T KOG1975|consen 209 AFETEESARIALRNVAKCLKPGGVFIGTIPDS 240 (389)
T ss_pred eeccHHHHHHHHHHHHhhcCCCcEEEEecCcH
Confidence 32222 259999999999999999999843
|
|
| >KOG3045 consensus Predicted RNA methylase involved in rRNA processing [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.00087 Score=68.54 Aligned_cols=79 Identities=23% Similarity=0.368 Sum_probs=53.6
Q ss_pred EeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEe
Q 009719 182 VAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELI 261 (527)
Q Consensus 182 ~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~ 261 (527)
+.+.|..++|.+|+|.|++++.+.|+- .+-..++.|++|||||||.|+|..-...+.+-. . ..+.+ ..|.+...
T Consensus 214 V~~cDm~~vPl~d~svDvaV~CLSLMg--tn~~df~kEa~RiLk~gG~l~IAEv~SRf~dv~-~--f~r~l-~~lGF~~~ 287 (325)
T KOG3045|consen 214 VIACDMRNVPLEDESVDVAVFCLSLMG--TNLADFIKEANRILKPGGLLYIAEVKSRFSDVK-G--FVRAL-TKLGFDVK 287 (325)
T ss_pred eeeccccCCcCccCcccEEEeeHhhhc--ccHHHHHHHHHHHhccCceEEEEehhhhcccHH-H--HHHHH-HHcCCeee
Confidence 456788899999999999997655533 444459999999999999999977533332111 1 22233 45666665
Q ss_pred eeecc
Q 009719 262 AVDGN 266 (527)
Q Consensus 262 ~~~~~ 266 (527)
.....
T Consensus 288 ~~d~~ 292 (325)
T KOG3045|consen 288 HKDVS 292 (325)
T ss_pred ehhhh
Confidence 55443
|
|
| >PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.00021 Score=76.14 Aligned_cols=93 Identities=18% Similarity=0.266 Sum_probs=61.6
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCC-CCchhHhhhcc--cc--ccccccCCCCCCCCCccchhhhcCccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARK-SSTLSVIYDRG--LI--GVYHDWCEPFSTYPRTYDLIHVSGIESLI 448 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~-~ntl~vi~eRG--Li--G~~hdwce~fstYPrtyDLiHa~~~fs~~ 448 (527)
..|||+|||.|+++..+.+. ++- |+-.+- +.++..+-+|. +- -...|+ ...+.+||+|.+..+|.+.
T Consensus 169 ~rVLDIGcG~G~~a~~la~~~g~~---V~giDlS~~~l~~A~~~~~~l~v~~~~~D~----~~l~~~fD~Ivs~~~~ehv 241 (383)
T PRK11705 169 MRVLDIGCGWGGLARYAAEHYGVS---VVGVTISAEQQKLAQERCAGLPVEIRLQDY----RDLNGQFDRIVSVGMFEHV 241 (383)
T ss_pred CEEEEeCCCccHHHHHHHHHCCCE---EEEEeCCHHHHHHHHHHhccCeEEEEECch----hhcCCCCCEEEEeCchhhC
Confidence 47999999999999888653 442 333332 36666655543 21 111222 2235789999988877643
Q ss_pred cCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 449 KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 449 ~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
. .-....++-++.|+|+|||++++.+
T Consensus 242 g-------~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 242 G-------PKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred C-------hHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 1 2235678999999999999999963
|
|
| >TIGR00452 methyltransferase, putative | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.00029 Score=73.41 Aligned_cols=96 Identities=14% Similarity=0.108 Sum_probs=59.0
Q ss_pred eeEeecCCCccchhhhccCCCe-eEEEecCCCCC-CchhHhhh----ccccccccccCCCCCCCCCccchhhhcCccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKS-STLSVIYD----RGLIGVYHDWCEPFSTYPRTYDLIHVSGIESLI 448 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~-ntl~vi~e----RGLiG~~hdwce~fstYPrtyDLiHa~~~fs~~ 448 (527)
+.|+|+|||.|.++.+|..... -|.-|=|...- .+...+-. .+-+....-=-|.++ .+.+||+|-|.+++-++
T Consensus 123 ~~VLDvGCG~G~~~~~~~~~g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~~~ie~lp-~~~~FD~V~s~gvL~H~ 201 (314)
T TIGR00452 123 RTILDVGCGSGYHMWRMLGHGAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEPLGIEQLH-ELYAFDTVFSMGVLYHR 201 (314)
T ss_pred CEEEEeccCCcHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEECCHHHCC-CCCCcCEEEEcchhhcc
Confidence 6899999999999887765542 35555444321 22111111 111111100011222 13589999999887654
Q ss_pred cCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 449 KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 449 ~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
. +..++|-|+-|+|||||.+|+.
T Consensus 202 ~---------dp~~~L~el~r~LkpGG~Lvle 224 (314)
T TIGR00452 202 K---------SPLEHLKQLKHQLVIKGELVLE 224 (314)
T ss_pred C---------CHHHHHHHHHHhcCCCCEEEEE
Confidence 3 4578999999999999999986
|
Known examples to date are restricted to the proteobacteria. |
| >PRK01683 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.00032 Score=69.39 Aligned_cols=115 Identities=17% Similarity=0.247 Sum_probs=67.1
Q ss_pred cCCCCeeeEeecCCCccchhhhccCC----CeeEEEecCCCCCCchhHhhhcc----c-cccccccCCCCCCCCCccchh
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSD----PVWVMNVVPARKSSTLSVIYDRG----L-IGVYHDWCEPFSTYPRTYDLI 439 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~----~VwvMnvvp~~~~ntl~vi~eRG----L-iG~~hdwce~fstYPrtyDLi 439 (527)
+....-.+|+|+|||.|.++..|.+. .|...-..| .-+..+-++- + .|-..+| . .+.+||+|
T Consensus 27 ~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~----~~i~~a~~~~~~~~~~~~d~~~~----~-~~~~fD~v 97 (258)
T PRK01683 27 VPLENPRYVVDLGCGPGNSTELLVERWPAARITGIDSSP----AMLAEARSRLPDCQFVEADIASW----Q-PPQALDLI 97 (258)
T ss_pred CCCcCCCEEEEEcccCCHHHHHHHHHCCCCEEEEEECCH----HHHHHHHHhCCCCeEEECchhcc----C-CCCCccEE
Confidence 33344578999999999999888643 233322211 2222222221 1 1222222 1 24689999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC--CH--HHHHHHHHHHhcCCceeE
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD--SP--EVIDKVSRIANTVRWTAA 501 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird--~~--~~~~~i~~i~~~l~W~~~ 501 (527)
+++..|.... +...+|-+|-|+|+|||.+++.- .. .....+++++....|...
T Consensus 98 ~~~~~l~~~~---------d~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 154 (258)
T PRK01683 98 FANASLQWLP---------DHLELFPRLVSLLAPGGVLAVQMPDNLDEPSHVLMREVAENGPWEQN 154 (258)
T ss_pred EEccChhhCC---------CHHHHHHHHHHhcCCCcEEEEECCCCCCCHHHHHHHHHHccCchHHH
Confidence 9998876432 23678999999999999999963 11 111234455555556543
|
|
| >PRK14968 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.00052 Score=63.77 Aligned_cols=141 Identities=17% Similarity=0.173 Sum_probs=81.0
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhh---------hccccccccccCCCCCCCCCccchhhhcC
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIY---------DRGLIGVYHDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~---------eRGLiG~~hdwce~fstYPrtyDLiHa~~ 443 (527)
-..|||+|||.|.++..|...+. +|.-.+-. +.+..+- +||+.-+.+|+.+.+. +.+||+|=++.
T Consensus 24 ~~~vLd~G~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~d~vi~n~ 98 (188)
T PRK14968 24 GDRVLEVGTGSGIVAIVAAKNGK---KVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEPFR--GDKFDVILFNP 98 (188)
T ss_pred CCEEEEEccccCHHHHHHHhhcc---eEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccccc--ccCceEEEECC
Confidence 34799999999999999876643 33333322 3333331 2224444566666543 24799985543
Q ss_pred ccccccCCC-------------CCCCCCcccccceeecccccCCcEEEEeC-CHHHHHHHHHHHhcCCceeEEecCCCCC
Q 009719 444 IESLIKNPG-------------SNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDKVSRIANTVRWTAAVHDKEPGS 509 (527)
Q Consensus 444 ~fs~~~~~~-------------~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~i~~i~~~l~W~~~~~~~e~~~ 509 (527)
-|.... +. .......+..++-++.|+|+|||.+++-. .....+++.+++...-|++.....+...
T Consensus 99 p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~gG~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~ 177 (188)
T PRK14968 99 PYLPTE-EEEEWDDWLNYALSGGKDGREVIDRFLDEVGRYLKPGGRILLLQSSLTGEDEVLEYLEKLGFEAEVVAEEKFP 177 (188)
T ss_pred CcCCCC-chhhhhhhhhhhhccCcChHHHHHHHHHHHHHhcCCCeEEEEEEcccCCHHHHHHHHHHCCCeeeeeeecccC
Confidence 332100 00 00012224568899999999999987642 2233456777888788876654334344
Q ss_pred CCCceEEEEEe
Q 009719 510 NGREKILVATK 520 (527)
Q Consensus 510 ~~~ekiLi~~K 520 (527)
.+.=.+++.+|
T Consensus 178 ~~~~~~~~~~~ 188 (188)
T PRK14968 178 FEELIVLELVK 188 (188)
T ss_pred CceEEEEEEeC
Confidence 44444555554
|
|
| >TIGR02716 C20_methyl_CrtF C-20 methyltransferase BchU | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.00086 Score=68.50 Aligned_cols=87 Identities=17% Similarity=0.204 Sum_probs=59.1
Q ss_pred hhccccccccCC--eeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccCh-
Q 009719 143 VASFGGSMLSEN--ILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN- 213 (527)
Q Consensus 143 vgsfga~Ll~r~--V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~- 213 (527)
.|.++..++.+. ..+..+ |. +.+++.|+++ |+. +.+..+|....++++ +|+|++++++|+|.+..
T Consensus 160 ~G~~~~~~~~~~p~~~~~~~---D~-~~~~~~a~~~~~~~gl~~rv~~~~~d~~~~~~~~--~D~v~~~~~lh~~~~~~~ 233 (306)
T TIGR02716 160 IGDISAAMLKHFPELDSTIL---NL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPE--ADAVLFCRILYSANEQLS 233 (306)
T ss_pred hhHHHHHHHHHCCCCEEEEE---ec-HHHHHHHHHHHHhCCccceEEEEecCccCCCCCC--CCEEEeEhhhhcCChHHH
Confidence 444444555542 222222 43 4567666543 443 445667877677764 69999999999897654
Q ss_pred HHHHHHHhhcccCCcEEEEecC
Q 009719 214 ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 214 ~~aL~Ei~RVLRPGG~lviS~p 235 (527)
..+|+++.|+|||||++++...
T Consensus 234 ~~il~~~~~~L~pgG~l~i~d~ 255 (306)
T TIGR02716 234 TIMCKKAFDAMRSGGRLLILDM 255 (306)
T ss_pred HHHHHHHHHhcCCCCEEEEEEe
Confidence 3599999999999999999864
|
Members of this protein family are the S-adenosylmethionine-depenedent C-20 methyltransferase BchU, part of the pathway of bacteriochlorophyll c production in photosynthetic green sulfur bacteria. The position modified by this enzyme represents the difference between bacteriochlorophylls c and d; strains lacking this protein can only produced bacteriochlorophyll d. |
| >PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities [] | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.00011 Score=73.18 Aligned_cols=113 Identities=24% Similarity=0.306 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----ccc--ccccc
Q 009719 352 RRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLI--GVYHD 424 (527)
Q Consensus 352 ~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLi--G~~hd 424 (527)
+.|++.+.+... ...+ ..|||++||+|-++..|.+.-----.|+-.|-. +-|.++-+| |+. =..+.
T Consensus 33 ~~wr~~~~~~~~-----~~~g--~~vLDv~~GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~ 105 (233)
T PF01209_consen 33 RRWRRKLIKLLG-----LRPG--DRVLDVACGTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQG 105 (233)
T ss_dssp ----SHHHHHHT-------S----EEEEET-TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-
T ss_pred HHHHHHHHhccC-----CCCC--CEEEEeCCChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEc
Confidence 788887755432 2223 289999999999888775431111133444433 666666554 221 11111
Q ss_pred cCCCCCCCC-CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 425 WCEPFSTYP-RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 425 wce~fstYP-rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
=.|.++ || .+||.|=++..+-.. .+....|-||=|+|||||.++|=|
T Consensus 106 da~~lp-~~d~sfD~v~~~fglrn~---------~d~~~~l~E~~RVLkPGG~l~ile 153 (233)
T PF01209_consen 106 DAEDLP-FPDNSFDAVTCSFGLRNF---------PDRERALREMYRVLKPGGRLVILE 153 (233)
T ss_dssp BTTB---S-TT-EEEEEEES-GGG----------SSHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CHHHhc-CCCCceeEEEHHhhHHhh---------CCHHHHHHHHHHHcCCCeEEEEee
Confidence 134455 45 899999887666533 346779999999999999998865
|
Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C. |
| >PLN02396 hexaprenyldihydroxybenzoate methyltransferase | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.00034 Score=73.18 Aligned_cols=95 Identities=12% Similarity=0.146 Sum_probs=63.3
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc---cccccccCCCCCCCCCccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL---IGVYHDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL---iG~~hdwce~fstYPrtyDLiHa~~~fs 446 (527)
..|||+|||.|.|+.+|..... +|.-+|.. ..+.++-++ ++ |-..+.=.|.++..+.+||+|=|..++.
T Consensus 133 ~~ILDIGCG~G~~s~~La~~g~---~V~GID~s~~~i~~Ar~~~~~~~~~~~i~~~~~dae~l~~~~~~FD~Vi~~~vLe 209 (322)
T PLN02396 133 LKFIDIGCGGGLLSEPLARMGA---TVTGVDAVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADEGRKFDAVLSLEVIE 209 (322)
T ss_pred CEEEEeeCCCCHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHhcCcccceeEEecCHHHhhhccCCCCEEEEhhHHH
Confidence 3799999999999988876542 33333433 445555443 12 1112111133333347999999988887
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+.. +...+|-|+-|+|+|||.++|.+
T Consensus 210 Hv~---------d~~~~L~~l~r~LkPGG~liist 235 (322)
T PLN02396 210 HVA---------NPAEFCKSLSALTIPNGATVLST 235 (322)
T ss_pred hcC---------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 654 24679999999999999999985
|
|
| >PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.00051 Score=68.52 Aligned_cols=108 Identities=18% Similarity=0.201 Sum_probs=65.4
Q ss_pred eeEeecCCCccchhhhccCCC---eeEEEecCCCCCCchhHhhh----ccccccccccCCCCCCCCCccchhhhcCcccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDP---VWVMNVVPARKSSTLSVIYD----RGLIGVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~---VwvMnvvp~~~~ntl~vi~e----RGLiG~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
.+|||+|||.|..+.++.... |..+-+-| ..+..+-+ .|+-...+-.+. ..+||+|.|+-....
T Consensus 121 ~~VLDiGcGsG~l~i~~~~~g~~~v~giDis~----~~l~~A~~n~~~~~~~~~~~~~~~-----~~~fD~Vvani~~~~ 191 (250)
T PRK00517 121 KTVLDVGCGSGILAIAAAKLGAKKVLAVDIDP----QAVEAARENAELNGVELNVYLPQG-----DLKADVIVANILANP 191 (250)
T ss_pred CEEEEeCCcHHHHHHHHHHcCCCeEEEEECCH----HHHHHHHHHHHHcCCCceEEEccC-----CCCcCEEEEcCcHHH
Confidence 579999999998887765543 33332222 23333322 233110110000 116999988533221
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeCCH-HHHHHHHHHHhcCCceeEEe
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP-EVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~-~~~~~i~~i~~~l~W~~~~~ 503 (527)
+..++-++-|+|+|||++|+++-. +....+.+.++..-++....
T Consensus 192 ------------~~~l~~~~~~~LkpgG~lilsgi~~~~~~~v~~~l~~~Gf~~~~~ 236 (250)
T PRK00517 192 ------------LLELAPDLARLLKPGGRLILSGILEEQADEVLEAYEEAGFTLDEV 236 (250)
T ss_pred ------------HHHHHHHHHHhcCCCcEEEEEECcHhhHHHHHHHHHHCCCEEEEE
Confidence 245677999999999999999743 35667777788888876654
|
|
| >PRK07580 Mg-protoporphyrin IX methyl transferase; Validated | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0011 Score=63.86 Aligned_cols=83 Identities=22% Similarity=0.211 Sum_probs=56.8
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccCh-HH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-AT 215 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~ 215 (527)
.|.++..|...+.. +...|.++.+++.|+++ +. ...+.+++ +++.+++||+|+|..+++|+++.. ..
T Consensus 74 ~G~~~~~l~~~~~~---v~~~D~s~~~i~~a~~~~~~~~~~~~i~~~~~d---~~~~~~~fD~v~~~~~l~~~~~~~~~~ 147 (230)
T PRK07580 74 VGSLSIPLARRGAK---VVASDISPQMVEEARERAPEAGLAGNITFEVGD---LESLLGRFDTVVCLDVLIHYPQEDAAR 147 (230)
T ss_pred CCHHHHHHHHcCCE---EEEEECCHHHHHHHHHHHHhcCCccCcEEEEcC---chhccCCcCEEEEcchhhcCCHHHHHH
Confidence 34445556666543 44558888999999875 22 23444444 667789999999999999987654 35
Q ss_pred HHHHHhhcccCCcEEE
Q 009719 216 YLIEVDRLLRPGGYLV 231 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lv 231 (527)
+++++.+++++|+.+.
T Consensus 148 ~l~~l~~~~~~~~~i~ 163 (230)
T PRK07580 148 MLAHLASLTRGSLIFT 163 (230)
T ss_pred HHHHHHhhcCCeEEEE
Confidence 8899999876555443
|
|
| >PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0019 Score=62.61 Aligned_cols=65 Identities=22% Similarity=0.138 Sum_probs=47.9
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++++++.|+++ +.. +.+..+|....+..+++||+|++..++.|. ..|+.|+|||||+|++...
T Consensus 104 D~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~~~~~fD~Ii~~~~~~~~-------~~~l~~~L~~gG~lvi~~~ 174 (205)
T PRK13944 104 EIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLEKHAPFDAIIVTAAASTI-------PSALVRQLKDGGVLVIPVE 174 (205)
T ss_pred eCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCccCCCccEEEEccCcchh-------hHHHHHhcCcCcEEEEEEc
Confidence 6677788777653 443 456677876655567899999999876553 3588899999999998653
|
|
| >cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy) | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0019 Score=51.53 Aligned_cols=71 Identities=28% Similarity=0.313 Sum_probs=50.0
Q ss_pred CcChHHHHHHHHH---cC--CCcEEeeccccCCCC-CCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEe
Q 009719 163 RDSHKAQIQFALE---RG--IPAFVAMLGTRRLPF-PAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 163 ~D~seaqvq~A~e---Rg--~pa~~~v~dae~LPF-pD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS 233 (527)
.|.++.+++.+.+ .+ ....+...+....+. ..+.||+|++..++.++.......+..+.++|||||+++++
T Consensus 27 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~~~~~l~~~~~~l~~~g~~~~~ 103 (107)
T cd02440 27 VDISPVALELARKAAAALLADNVEVLKGDAEELPPEADESFDVIISDPPLHHLVEDLARFLEEARRLLKPGGVLVLT 103 (107)
T ss_pred EeCCHHHHHHHHHHHhcccccceEEEEcChhhhccccCCceEEEEEccceeehhhHHHHHHHHHHHHcCCCCEEEEE
Confidence 3666677776652 12 224455566555543 67889999999988663444445999999999999999986
|
There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.). |
| >PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0024 Score=67.33 Aligned_cols=120 Identities=14% Similarity=0.114 Sum_probs=73.9
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccC----hH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY----NA 214 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~----~~ 214 (527)
.|.++..+..+.-. ..+...|.++.+++.|+++ ++...+...|. +...++.||+|+|+-.+|+..+. ..
T Consensus 207 ~G~ls~~la~~~p~-~~v~~vDis~~Al~~A~~nl~~n~l~~~~~~~D~--~~~~~~~fDlIvsNPPFH~g~~~~~~~~~ 283 (342)
T PRK09489 207 AGVLSAVLARHSPK-IRLTLSDVSAAALESSRATLAANGLEGEVFASNV--FSDIKGRFDMIISNPPFHDGIQTSLDAAQ 283 (342)
T ss_pred cCHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCEEEEccc--ccccCCCccEEEECCCccCCccccHHHHH
Confidence 34444455554321 1244447788888877643 45555554554 23346899999999776442221 23
Q ss_pred HHHHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeeeecceEEEeC
Q 009719 215 TYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKK 272 (527)
Q Consensus 215 ~aL~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~~~~v~iwrK 272 (527)
.++.++.|.|||||.|++.... ..+|..+ +++... ..+.+.+.+...||+-
T Consensus 284 ~~i~~a~~~LkpgG~L~iVan~---~l~y~~~--l~~~Fg--~~~~la~~~~f~v~~a 334 (342)
T PRK09489 284 TLIRGAVRHLNSGGELRIVANA---FLPYPDL--LDETFG--SHEVLAQTGRFKVYRA 334 (342)
T ss_pred HHHHHHHHhcCcCCEEEEEEeC---CCChHHH--HHHHcC--CeEEEEeCCCEEEEEE
Confidence 4899999999999999997641 2233332 222222 2578888888999974
|
|
| >PRK13255 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0013 Score=64.94 Aligned_cols=83 Identities=14% Similarity=0.074 Sum_probs=59.5
Q ss_pred ccccccCCeeEEeeccCcChHHHHHHH-HHcCCC----------------cEEeeccccCCCCC-CCcccEEEecCcccc
Q 009719 147 GGSMLSENILTLSFAPRDSHKAQIQFA-LERGIP----------------AFVAMLGTRRLPFP-AFSFDIVHCSRCLIP 208 (527)
Q Consensus 147 ga~Ll~r~V~~msiAp~D~seaqvq~A-~eRg~p----------------a~~~v~dae~LPFp-D~SFDlV~cs~~l~h 208 (527)
+.+|.++|..++.+ |.++..++.| .++++. +.+.++|...++.. ...||+|.-+.+++|
T Consensus 52 a~~LA~~G~~V~av---D~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~~~~~~fd~v~D~~~~~~ 128 (218)
T PRK13255 52 MLWLAEQGHEVLGV---ELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTAADLADVDAVYDRAALIA 128 (218)
T ss_pred HHHHHhCCCeEEEE---ccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCcccCCCeeEEEehHhHhh
Confidence 56777887655555 6677777755 455543 34567787777544 368999998888888
Q ss_pred cccCh-HHHHHHHhhcccCCcEEEE
Q 009719 209 FTAYN-ATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 209 w~d~~-~~aL~Ei~RVLRPGG~lvi 232 (527)
++... ..++..+.++|||||++++
T Consensus 129 l~~~~R~~~~~~l~~lL~pgG~~~l 153 (218)
T PRK13255 129 LPEEMRERYVQQLAALLPAGCRGLL 153 (218)
T ss_pred CCHHHHHHHHHHHHHHcCCCCeEEE
Confidence 87554 3599999999999997444
|
|
| >PRK14121 tRNA (guanine-N(7)-)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0011 Score=71.28 Aligned_cols=71 Identities=23% Similarity=0.363 Sum_probs=51.2
Q ss_pred cChHHHHHHHH----HcCCC-cEEeeccccCC--CCCCCcccEEEecCcccccccCh------HHHHHHHhhcccCCcEE
Q 009719 164 DSHKAQIQFAL----ERGIP-AFVAMLGTRRL--PFPAFSFDIVHCSRCLIPFTAYN------ATYLIEVDRLLRPGGYL 230 (527)
Q Consensus 164 D~seaqvq~A~----eRg~p-a~~~v~dae~L--PFpD~SFDlV~cs~~l~hw~d~~------~~aL~Ei~RVLRPGG~l 230 (527)
|.+..++..|. ++++. +.+..+|+..+ +|++++||.|++... .+|+... ..+|.|+.|+|||||.+
T Consensus 153 EI~~~~i~~a~~ka~~~gL~NV~~i~~DA~~ll~~~~~~s~D~I~lnFP-dPW~KkrHRRlv~~~fL~e~~RvLkpGG~l 231 (390)
T PRK14121 153 EIHTPSIEQVLKQIELLNLKNLLIINYDARLLLELLPSNSVEKIFVHFP-VPWDKKPHRRVISEDFLNEALRVLKPGGTL 231 (390)
T ss_pred ECCHHHHHHHHHHHHHcCCCcEEEEECCHHHhhhhCCCCceeEEEEeCC-CCccccchhhccHHHHHHHHHHHcCCCcEE
Confidence 44555555443 34554 45677888765 689999999998754 4675432 24899999999999999
Q ss_pred EEecC
Q 009719 231 VISGP 235 (527)
Q Consensus 231 viS~p 235 (527)
.+.+-
T Consensus 232 ~l~TD 236 (390)
T PRK14121 232 ELRTD 236 (390)
T ss_pred EEEEE
Confidence 99874
|
|
| >PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.00015 Score=72.06 Aligned_cols=93 Identities=16% Similarity=0.192 Sum_probs=60.7
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccccc---ccc-ccCCCCC-CCCCccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGLIG---VYH-DWCEPFS-TYPRTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGLiG---~~h-dwce~fs-tYPrtyDLiHa~~~ 444 (527)
..|||+|||.|.++..|..... +|+-.|.. ..+..+-+ .|+.. +.+ |..+ +. ..+.+||+|.+..+
T Consensus 46 ~~vLDiGcG~G~~a~~la~~g~---~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~~-l~~~~~~~fD~V~~~~v 121 (255)
T PRK11036 46 LRVLDAGGGEGQTAIKLAELGH---QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQD-IAQHLETPVDLILFHAV 121 (255)
T ss_pred CEEEEeCCCchHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCHHH-HhhhcCCCCCEEEehhH
Confidence 5899999999999999987753 33333332 44444333 34422 111 1111 22 23589999999988
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
+.... +...+|-|+-|+|+|||.+++-
T Consensus 122 l~~~~---------~~~~~l~~~~~~LkpgG~l~i~ 148 (255)
T PRK11036 122 LEWVA---------DPKSVLQTLWSVLRPGGALSLM 148 (255)
T ss_pred HHhhC---------CHHHHHHHHHHHcCCCeEEEEE
Confidence 87543 1257899999999999999875
|
|
| >PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0018 Score=64.73 Aligned_cols=90 Identities=19% Similarity=0.158 Sum_probs=53.5
Q ss_pred eccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCCCCC
Q 009719 160 FAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQW 239 (527)
Q Consensus 160 iAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp~~~ 239 (527)
+...|.++.+++.|+++.....+ .+...++..+.+||+|+|+... + ....++.++.|+|||||++++++.-..
T Consensus 145 v~giDis~~~l~~A~~n~~~~~~--~~~~~~~~~~~~fD~Vvani~~-~---~~~~l~~~~~~~LkpgG~lilsgi~~~- 217 (250)
T PRK00517 145 VLAVDIDPQAVEAARENAELNGV--ELNVYLPQGDLKADVIVANILA-N---PLLELAPDLARLLKPGGRLILSGILEE- 217 (250)
T ss_pred EEEEECCHHHHHHHHHHHHHcCC--CceEEEccCCCCcCEEEEcCcH-H---HHHHHHHHHHHhcCCCcEEEEEECcHh-
Confidence 33447788899888765211101 0111233334489999987543 2 122488999999999999999975211
Q ss_pred CCchhHHHHHHHHHHhcceEEe
Q 009719 240 PKQDKEWADLQAVARALCYELI 261 (527)
Q Consensus 240 ~~~~~~w~~i~~l~~~mcW~~~ 261 (527)
..+.+.+..+..-++..
T Consensus 218 -----~~~~v~~~l~~~Gf~~~ 234 (250)
T PRK00517 218 -----QADEVLEAYEEAGFTLD 234 (250)
T ss_pred -----hHHHHHHHHHHCCCEEE
Confidence 12344444555555544
|
|
| >TIGR03534 RF_mod_PrmC protein-(glutamine-N5) methyltransferase, release factor-specific | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.00045 Score=67.37 Aligned_cols=123 Identities=20% Similarity=0.282 Sum_probs=69.8
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHh----hhccc--ccccc-ccCCCCCCCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVI----YDRGL--IGVYH-DWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi----~eRGL--iG~~h-dwce~fstYPrtyDLiHa~~~f 445 (527)
.+|+|+|||.|.|+.++... +-. +++-.+.. ..+..+ -..|+ +-+++ |+-+.+. ...||+|-++--|
T Consensus 89 ~~ilDig~G~G~~~~~l~~~~~~~--~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~--~~~fD~Vi~npPy 164 (251)
T TIGR03534 89 LRVLDLGTGSGAIALALAKERPDA--RVTAVDISPEALAVARKNAARLGLDNVTFLQSDWFEPLP--GGKFDLIVSNPPY 164 (251)
T ss_pred CeEEEEeCcHhHHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCeEEEEECchhccCc--CCceeEEEECCCC
Confidence 47999999999999988764 211 22222221 222222 22343 11222 3222221 3789999886555
Q ss_pred ccccCCCCCCCCCc-----------------ccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCceeE
Q 009719 446 SLIKNPGSNKNSCS-----------------LVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAA 501 (527)
Q Consensus 446 s~~~~~~~~~~rC~-----------------~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~~ 501 (527)
....++........ ...++-++-|+|+|||.+++........++++++++..++..
T Consensus 165 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~~~L~~gG~~~~~~~~~~~~~~~~~l~~~gf~~v 237 (251)
T TIGR03534 165 IPEADIHLLDPEVRFHEPRLALFGGEDGLDFYRRIIAQAPRLLKPGGWLLLEIGYDQGEAVRALFEAAGFADV 237 (251)
T ss_pred CchhhhhhcChhhhhcCCHHHHcCCCcHHHHHHHHHHHHHHhcccCCEEEEEECccHHHHHHHHHHhCCCCce
Confidence 43211000000000 124667889999999999998766566778888887777643
|
Members of this protein family are HemK (PrmC), a protein once thought to be involved in heme biosynthesis but now recognized to be a protein-glutamine methyltransferase that modifies the peptide chain release factors. All members of the seed alignment are encoded next to the release factor 1 gene (prfA) and confirmed by phylogenetic analysis. SIMBAL analysis (manuscript in prep.) shows the motif [LIV]PRx[DE]TE (in Escherichia coli, IPRPDTE) confers specificity for the release factors rather than for ribosomal protein L3. |
| >PF08003 Methyltransf_9: Protein of unknown function (DUF1698); InterPro: IPR010017 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0015 Score=68.01 Aligned_cols=90 Identities=24% Similarity=0.275 Sum_probs=67.5
Q ss_pred hhccccc----cccCCee-EEeeccCcChHHHHHHHHHc-CCCc-EEe-eccccCCCCCCCcccEEEecCcccccccChH
Q 009719 143 VASFGGS----MLSENIL-TLSFAPRDSHKAQIQFALER-GIPA-FVA-MLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA 214 (527)
Q Consensus 143 vgsfga~----Ll~r~V~-~msiAp~D~seaqvq~A~eR-g~pa-~~~-v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~ 214 (527)
+|+..|| |+.+|+. ++.|.|....-.|-+++++- |... .+. -.+.+.||. .++||+|.|.-+|-|-.++-.
T Consensus 122 IGC~nGY~~frM~~~GA~~ViGiDP~~lf~~QF~~i~~~lg~~~~~~~lplgvE~Lp~-~~~FDtVF~MGVLYHrr~Pl~ 200 (315)
T PF08003_consen 122 IGCNNGYYSFRMLGRGAKSVIGIDPSPLFYLQFEAIKHFLGQDPPVFELPLGVEDLPN-LGAFDTVFSMGVLYHRRSPLD 200 (315)
T ss_pred ecCCCcHHHHHHhhcCCCEEEEECCChHHHHHHHHHHHHhCCCccEEEcCcchhhccc-cCCcCEEEEeeehhccCCHHH
Confidence 5665554 4667774 78888877666666665543 2222 222 257899999 899999999999999887776
Q ss_pred HHHHHHhhcccCCcEEEEec
Q 009719 215 TYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 215 ~aL~Ei~RVLRPGG~lviS~ 234 (527)
.|.++...|||||.|++-+
T Consensus 201 -~L~~Lk~~L~~gGeLvLET 219 (315)
T PF08003_consen 201 -HLKQLKDSLRPGGELVLET 219 (315)
T ss_pred -HHHHHHHhhCCCCEEEEEE
Confidence 9999999999999999744
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This entry represents a set of bacterial AdoMet-dependent tRNA (mo5U34)-methyltransferases. These enzymes catalyse the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at the wobble position (34) of tRNA []. The 5-methoxyuridine is subsequently converted to uridine-5-oxyacetic acid, a modified nucleoside that is apparently necessary for the efficient decoding of G-ending Pro, Ala, and Val codons in these organisms [].; GO: 0016300 tRNA (uracil) methyltransferase activity, 0002098 tRNA wobble uridine modification |
| >TIGR00438 rrmJ cell division protein FtsJ | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.00085 Score=63.75 Aligned_cols=132 Identities=14% Similarity=0.195 Sum_probs=69.0
Q ss_pred eeEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhhhccccccccccCCCC------CCC-CCccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPF------STY-PRTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwce~f------stY-PrtyDLiHa~ 442 (527)
.+|||+|||.|+++.++..+ .|+..=+-|... + .|+--+..|..+.. ..+ +.+||+|=++
T Consensus 34 ~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~~-------~-~~i~~~~~d~~~~~~~~~l~~~~~~~~~D~V~~~ 105 (188)
T TIGR00438 34 DTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMKP-------I-ENVDFIRGDFTDEEVLNKIRERVGDDKVDVVMSD 105 (188)
T ss_pred CEEEEecCCCCHHHHHHHHHhCCCceEEEEecccccc-------C-CCceEEEeeCCChhHHHHHHHHhCCCCccEEEcC
Confidence 48999999999997766332 255543333210 0 12221223443321 012 3578887765
Q ss_pred Ccc--c-cccCCCCCCCCCcccccceeecccccCCcEEEEeC-C----HHHHHHHHHHHhcCCceeEEe-cCCCCCCCCc
Q 009719 443 GIE--S-LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-S----PEVIDKVSRIANTVRWTAAVH-DKEPGSNGRE 513 (527)
Q Consensus 443 ~~f--s-~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~----~~~~~~i~~i~~~l~W~~~~~-~~e~~~~~~e 513 (527)
... + .|. .......+.++.+|-++-|+|+|||.+++-. . .+++.++++ . -|.+.+. |.-......|
T Consensus 106 ~~~~~~g~~~-~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~~~~~~~~~~l~~l~~---~-~~~~~~~~~~~~~~~~~~ 180 (188)
T TIGR00438 106 AAPNISGYWD-IDHLRSIDLVELALDIAKEVLKPKGNFVVKVFQGEEIDEYLNELRK---L-FEKVKVTKPQASRKRSAE 180 (188)
T ss_pred CCCCCCCCcc-ccHHHHHHHHHHHHHHHHHHccCCCEEEEEEccCccHHHHHHHHHh---h-hceEEEeCCCCCCcccce
Confidence 321 1 110 0000001224678899999999999999942 2 233433333 2 2545443 3333444578
Q ss_pred eEEEEE
Q 009719 514 KILVAT 519 (527)
Q Consensus 514 kiLi~~ 519 (527)
+.+||.
T Consensus 181 ~~~~~~ 186 (188)
T TIGR00438 181 VYIVAK 186 (188)
T ss_pred EEEEEe
Confidence 888885
|
|
| >COG4106 Tam Trans-aconitate methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0046 Score=62.04 Aligned_cols=173 Identities=16% Similarity=0.139 Sum_probs=113.2
Q ss_pred eeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCCCC
Q 009719 159 SFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQ 238 (527)
Q Consensus 159 siAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp~~ 238 (527)
.|...|.|.+|+..|++|...+.|..+|.... =|+..+|++.++-++ ||-.+-..+|.-+.--|.|||.|.+--| -|
T Consensus 56 ~i~GiDsS~~Mla~Aa~rlp~~~f~~aDl~~w-~p~~~~dllfaNAvl-qWlpdH~~ll~rL~~~L~Pgg~LAVQmP-dN 132 (257)
T COG4106 56 VITGIDSSPAMLAKAAQRLPDATFEEADLRTW-KPEQPTDLLFANAVL-QWLPDHPELLPRLVSQLAPGGVLAVQMP-DN 132 (257)
T ss_pred eEeeccCCHHHHHHHHHhCCCCceecccHhhc-CCCCccchhhhhhhh-hhccccHHHHHHHHHhhCCCceEEEECC-Cc
Confidence 35566999999999999998899988887554 256889999999887 6654444499999999999999999887 23
Q ss_pred CCCchhHHHHHHHHHHhcceEEeeeecceEEEeCCCcc-ccccccCCCCCCCCCCCCCCCcccccccccccccccCCC--
Q 009719 239 WPKQDKEWADLQAVARALCYELIAVDGNTVIWKKPVGE-SCLSNQNEFGLELCDESDDPNYAWYFKLKKCVSGTSSVK-- 315 (527)
Q Consensus 239 ~~~~~~~w~~i~~l~~~mcW~~~~~~~~v~iwrKp~~~-~c~~~~~~~~p~~C~~~~d~d~~wy~~~~~Ci~~~~~~~-- 315 (527)
+... .-..|+++++..-|...-. +..+.++++-. ..|-.. -.|--|+- +.|-+.- .++++...
T Consensus 133 ~dep--sH~~mr~~A~~~p~~~~l~--~~~~~r~~v~s~a~Yy~l--La~~~~rv-----DiW~T~Y---~h~l~~a~aI 198 (257)
T COG4106 133 LDEP--SHRLMRETADEAPFAQELG--GRGLTRAPLPSPAAYYEL--LAPLACRV-----DIWHTTY---YHQLPGADAI 198 (257)
T ss_pred cCch--hHHHHHHHHhcCchhhhhC--ccccccCCCCCHHHHHHH--hCccccee-----eeeeeec---cccCCCccch
Confidence 2211 1235888888877755443 33346888864 333321 11224542 2353322 22333322
Q ss_pred -ccccCCCCCCCCccccCCCccccccccCccccchhhHHHHHHHHHHHHHhhh
Q 009719 316 -GEYAVGTIPKWPQRLTKAPSRALVMKNGYDVFEADSRRWRRRVAYYKNTLNV 367 (527)
Q Consensus 316 -~~~~~~~~~~wP~Rl~~~p~rl~~~g~~~~~f~~d~~~W~~~v~~Y~~~l~~ 367 (527)
+++.+..+.||=+|| |.+.|+.-.+.|...|..
T Consensus 199 vdWvkgTgLrP~L~~L-------------------~e~~~~~FL~~Y~~~l~~ 232 (257)
T COG4106 199 VDWVKGTGLRPYLDRL-------------------DEEERQRFLDRYLALLAE 232 (257)
T ss_pred hhheeccccceecccc-------------------CHHHHHHHHHHHHHHHHH
Confidence 355666666555554 456788888889987764
|
|
| >PLN02585 magnesium protoporphyrin IX methyltransferase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0017 Score=67.82 Aligned_cols=86 Identities=20% Similarity=0.206 Sum_probs=54.8
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCC----------CcEEeeccccCCCCCCCcccEEEecCcccccccC
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI----------PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY 212 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~----------pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~ 212 (527)
+|.++.+|..++..+ ...|.++.|++.|+++.. ...+.++|.+.+ +++||+|+|..+++|+++.
T Consensus 155 tG~~a~~la~~g~~V---~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~f~~~Dl~~l---~~~fD~Vv~~~vL~H~p~~ 228 (315)
T PLN02585 155 TGSLAIPLALEGAIV---SASDISAAMVAEAERRAKEALAALPPEVLPKFEANDLESL---SGKYDTVTCLDVLIHYPQD 228 (315)
T ss_pred CCHHHHHHHHCCCEE---EEEECCHHHHHHHHHHHHhcccccccccceEEEEcchhhc---CCCcCEEEEcCEEEecCHH
Confidence 455556666666543 334888999999987631 233444554433 6899999999999998875
Q ss_pred hH-HHHHHHhhcccCCcEEEEecCC
Q 009719 213 NA-TYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 213 ~~-~aL~Ei~RVLRPGG~lviS~pp 236 (527)
.. ..+..+.+ +.+||. +++..|
T Consensus 229 ~~~~ll~~l~~-l~~g~l-iIs~~p 251 (315)
T PLN02585 229 KADGMIAHLAS-LAEKRL-IISFAP 251 (315)
T ss_pred HHHHHHHHHHh-hcCCEE-EEEeCC
Confidence 43 25555555 455555 445433
|
|
| >PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.00071 Score=66.15 Aligned_cols=55 Identities=15% Similarity=0.031 Sum_probs=41.7
Q ss_pred cEEeeccccCCC--------CCCCcccEEEecCcccccccCh-----------HHHHHHHhhcccCCcEEEEecC
Q 009719 180 AFVAMLGTRRLP--------FPAFSFDIVHCSRCLIPFTAYN-----------ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 180 a~~~v~dae~LP--------FpD~SFDlV~cs~~l~hw~d~~-----------~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.+.++|....+ +++++||+|+|+.+. ||.... ..+|.|+.|+|||||.|++...
T Consensus 93 v~~i~~D~~~~~~~~~i~~~~~~~~~D~V~S~~~~-~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpGG~~vi~~~ 166 (209)
T PRK11188 93 VDFLQGDFRDELVLKALLERVGDSKVQVVMSDMAP-NMSGTPAVDIPRAMYLVELALDMCRDVLAPGGSFVVKVF 166 (209)
T ss_pred cEEEecCCCChHHHHHHHHHhCCCCCCEEecCCCC-ccCCChHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 456677877753 788999999998764 443321 2389999999999999999653
|
|
| >KOG1269 consensus SAM-dependent methyltransferases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.00071 Score=72.01 Aligned_cols=52 Identities=21% Similarity=0.403 Sum_probs=46.8
Q ss_pred EEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEe
Q 009719 181 FVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 181 ~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS 233 (527)
.+...+....||+|++||.|-+..+..|-++..+ ++.|+.|||+|||+++..
T Consensus 163 ~~~~~~~~~~~fedn~fd~v~~ld~~~~~~~~~~-~y~Ei~rv~kpGG~~i~~ 214 (364)
T KOG1269|consen 163 NFVVADFGKMPFEDNTFDGVRFLEVVCHAPDLEK-VYAEIYRVLKPGGLFIVK 214 (364)
T ss_pred ceehhhhhcCCCCccccCcEEEEeecccCCcHHH-HHHHHhcccCCCceEEeH
Confidence 3466788899999999999999999999888777 999999999999999974
|
|
| >PRK14968 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0075 Score=56.01 Aligned_cols=89 Identities=19% Similarity=0.208 Sum_probs=55.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC---cEEeeccccCCCCCCCcccEEEecCccccccc----
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP---AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA---- 211 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p---a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d---- 211 (527)
.|.++..|..++.. +...|.++.+++.|+++ +.. +.+...|... ++++++||+|+++.-..+...
T Consensus 34 ~G~~~~~l~~~~~~---v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~d~vi~n~p~~~~~~~~~~ 109 (188)
T PRK14968 34 SGIVAIVAAKNGKK---VVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFE-PFRGDKFDVILFNPPYLPTEEEEEW 109 (188)
T ss_pred cCHHHHHHHhhcce---EEEEECCHHHHHHHHHHHHHcCCCCcceEEEeccccc-cccccCceEEEECCCcCCCCchhhh
Confidence 34445555555433 33347778888877543 332 4455566433 566779999998754332110
Q ss_pred ----------------ChHHHHHHHhhcccCCcEEEEecC
Q 009719 212 ----------------YNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 212 ----------------~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
....++.++.|+|||||.+++..+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~gG~~~~~~~ 149 (188)
T PRK14968 110 DDWLNYALSGGKDGREVIDRFLDEVGRYLKPGGRILLLQS 149 (188)
T ss_pred hhhhhhhhccCcChHHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 012379999999999999988765
|
|
| >COG1041 Predicted DNA modification methylase [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0018 Score=68.47 Aligned_cols=89 Identities=21% Similarity=0.358 Sum_probs=65.0
Q ss_pred ccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcE--EeeccccCCCCCCCcccEEEecC--cc---ccccc---C
Q 009719 147 GGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAF--VAMLGTRRLPFPAFSFDIVHCSR--CL---IPFTA---Y 212 (527)
Q Consensus 147 ga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~--~~v~dae~LPFpD~SFDlV~cs~--~l---~hw~d---~ 212 (527)
|+-|.+.+..+...-..|+.++|++-|+.. ++.-. +.+.|+..|||++++||+|.|.- .. ..-.. -
T Consensus 209 GgiLiEagl~G~~viG~Did~~mv~gak~Nl~~y~i~~~~~~~~~Da~~lpl~~~~vdaIatDPPYGrst~~~~~~l~~L 288 (347)
T COG1041 209 GGILIEAGLMGARVIGSDIDERMVRGAKINLEYYGIEDYPVLKVLDATNLPLRDNSVDAIATDPPYGRSTKIKGEGLDEL 288 (347)
T ss_pred cHHHHhhhhcCceEeecchHHHHHhhhhhhhhhhCcCceeEEEecccccCCCCCCccceEEecCCCCcccccccccHHHH
Confidence 556777777777777779999999988754 33322 34459999999999999999861 10 11111 1
Q ss_pred hHHHHHHHhhcccCCcEEEEecC
Q 009719 213 NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 213 ~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
-..+|.++.+|||+||++++.+|
T Consensus 289 y~~~le~~~evLk~gG~~vf~~p 311 (347)
T COG1041 289 YEEALESASEVLKPGGRIVFAAP 311 (347)
T ss_pred HHHHHHHHHHHhhcCcEEEEecC
Confidence 12489999999999999999998
|
|
| >TIGR03438 probable methyltransferase | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0011 Score=68.13 Aligned_cols=89 Identities=17% Similarity=0.154 Sum_probs=55.9
Q ss_pred ccccccCCeeEEeeccCcChHHHHHHHHHcC------CCcEEeeccccC-CCCCCCc----ccEEEecCcccccccCh-H
Q 009719 147 GGSMLSENILTLSFAPRDSHKAQIQFALERG------IPAFVAMLGTRR-LPFPAFS----FDIVHCSRCLIPFTAYN-A 214 (527)
Q Consensus 147 ga~Ll~r~V~~msiAp~D~seaqvq~A~eRg------~pa~~~v~dae~-LPFpD~S----FDlV~cs~~l~hw~d~~-~ 214 (527)
+..|++.......+.+.|.|++|++.|.++- +.+....+|... ++++... ..++++...+.|+...+ .
T Consensus 78 t~~Ll~~l~~~~~~~~iDiS~~mL~~a~~~l~~~~p~~~v~~i~gD~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~~e~~ 157 (301)
T TIGR03438 78 TRLLLDALRQPARYVPIDISADALKESAAALAADYPQLEVHGICADFTQPLALPPEPAAGRRLGFFPGSTIGNFTPEEAV 157 (301)
T ss_pred HHHHHHhhccCCeEEEEECCHHHHHHHHHHHHhhCCCceEEEEEEcccchhhhhcccccCCeEEEEecccccCCCHHHHH
Confidence 3345555321234555589999999987651 233445677554 5565443 33444445666665433 3
Q ss_pred HHHHHHhhcccCCcEEEEecC
Q 009719 215 TYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 215 ~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+|+++.++|+|||.|++...
T Consensus 158 ~~L~~i~~~L~pgG~~lig~d 178 (301)
T TIGR03438 158 AFLRRIRQLLGPGGGLLIGVD 178 (301)
T ss_pred HHHHHHHHhcCCCCEEEEecc
Confidence 599999999999999999764
|
This model represents a distinct set of uncharacterized proteins found in the bacteria. Analysis by PSI-BLAST shows remote sequence homology to methyltransferases |
| >smart00138 MeTrc Methyltransferase, chemotaxis proteins | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0006 Score=69.01 Aligned_cols=133 Identities=14% Similarity=0.104 Sum_probs=81.1
Q ss_pred cCccccchhhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccc----hhhhccCC----CeeEEEecCCCCC-CchhH
Q 009719 342 NGYDVFEADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGG----FAAALTSD----PVWVMNVVPARKS-STLSV 412 (527)
Q Consensus 342 ~~~~~f~~d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~Gg----FaAaL~~~----~VwvMnvvp~~~~-ntl~v 412 (527)
++...|-.|..+|..-.+.....+......+.--.|+|.|||+|- .|-.|.+. .-|...|+-+|-. .-|..
T Consensus 68 i~~T~FfR~~~~~~~l~~~vlp~l~~~~~~~~~~ri~d~GCgtGee~YslA~~l~e~~~~~~~~~~~I~g~Dis~~~L~~ 147 (264)
T smart00138 68 TNETRFFRESKHFEALEEKVLPLLIASRRHGRRVRIWSAGCSTGEEPYSLAMLLAETLPKAREPDVKILATDIDLKALEK 147 (264)
T ss_pred cCCCcccCCcHHHHHHHHHHhHHHHHhcCCCCCEEEEeccccCChHHHHHHHHHHHHhhhcCCCCeEEEEEECCHHHHHH
Confidence 445568889999998776655433222222333579999999994 55544331 1234455555543 33332
Q ss_pred hhhccc---------c--------------------------ccccccCCCCCCC-CCccchhhhcCccccccCCCCCCC
Q 009719 413 IYDRGL---------I--------------------------GVYHDWCEPFSTY-PRTYDLIHVSGIESLIKNPGSNKN 456 (527)
Q Consensus 413 i~eRGL---------i--------------------------G~~hdwce~fstY-PrtyDLiHa~~~fs~~~~~~~~~~ 456 (527)
+- +|+ . =..||-.+. .+ +..||+|.|..+|..+.
T Consensus 148 Ar-~~~y~~~~~~~~~~~~~~~yf~~~~~~~~v~~~ir~~V~F~~~dl~~~--~~~~~~fD~I~crnvl~yf~------- 217 (264)
T smart00138 148 AR-AGIYPERELEDLPKALLARYFSRVEDKYRVKPELKERVRFAKHNLLAE--SPPLGDFDLIFCRNVLIYFD------- 217 (264)
T ss_pred HH-cCCCCHHHHhcCCHHHHhhhEEeCCCeEEEChHHhCcCEEeeccCCCC--CCccCCCCEEEechhHHhCC-------
Confidence 22 221 0 012343432 13 37899999998887653
Q ss_pred CCcccccceeecccccCCcEEEEeCCHH
Q 009719 457 SCSLVDLMVEMDRMLRPEGTVVVRDSPE 484 (527)
Q Consensus 457 rC~~~~illEmDRILRP~G~~iird~~~ 484 (527)
.=....++-++-|+|+|||++++-....
T Consensus 218 ~~~~~~~l~~l~~~L~pGG~L~lg~~E~ 245 (264)
T smart00138 218 EPTQRKLLNRFAEALKPGGYLFLGHSES 245 (264)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEECccc
Confidence 1112469999999999999999976543
|
Methylates methyl-accepting chemotaxis proteins to form gamma-glutamyl methyl ester residues. |
| >PRK09328 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0035 Score=62.28 Aligned_cols=140 Identities=19% Similarity=0.324 Sum_probs=74.0
Q ss_pred eeEeecCCCccchhhhccCCC-eeEEEecCCCCC-CchhHhhhc---cc---cc-cccccCCCCCCCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDP-VWVMNVVPARKS-STLSVIYDR---GL---IG-VYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~-VwvMnvvp~~~~-ntl~vi~eR---GL---iG-~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
.+|+|+|||.|.++.+|...- -+ .|+-.|.. ..+..+-++ ++ +- +..|+-+++. +.+||+|-++--+
T Consensus 110 ~~vLDiG~GsG~~~~~la~~~~~~--~v~~iDis~~~l~~a~~n~~~~~~~~i~~~~~d~~~~~~--~~~fD~Iv~npPy 185 (275)
T PRK09328 110 LRVLDLGTGSGAIALALAKERPDA--EVTAVDISPEALAVARRNAKHGLGARVEFLQGDWFEPLP--GGRFDLIVSNPPY 185 (275)
T ss_pred CEEEEEcCcHHHHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHhCCCCcEEEEEccccCcCC--CCceeEEEECCCc
Confidence 469999999999998885432 11 22222222 333333322 22 11 1224433332 3789999875433
Q ss_pred ccccC-----CC-----------CCCCCCc-ccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCceeEEecCCCC
Q 009719 446 SLIKN-----PG-----------SNKNSCS-LVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAVHDKEPG 508 (527)
Q Consensus 446 s~~~~-----~~-----------~~~~rC~-~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~~~~~~e~~ 508 (527)
..... +. .+.+... +..++-++-++|+|||++++.-....-..+++++++..+.....-. .
T Consensus 186 ~~~~~~~~~~~~v~~~ep~~al~~g~~g~~~~~~~~~~~~~~Lk~gG~l~~e~g~~~~~~~~~~l~~~gf~~v~~~~--d 263 (275)
T PRK09328 186 IPEADIHLLQPEVRDHEPHLALFGGEDGLDFYRRIIEQAPRYLKPGGWLLLEIGYDQGEAVRALLAAAGFADVETRK--D 263 (275)
T ss_pred CCcchhhhCCchhhhcCCchhhcCCCCHHHHHHHHHHHHHHhcccCCEEEEEECchHHHHHHHHHHhCCCceeEEec--C
Confidence 21100 00 0000000 1345667779999999999974444445677777665564222211 2
Q ss_pred CCCCceEEEEEe
Q 009719 509 SNGREKILVATK 520 (527)
Q Consensus 509 ~~~~ekiLi~~K 520 (527)
-.+.+++++++|
T Consensus 264 ~~~~~r~~~~~~ 275 (275)
T PRK09328 264 LAGRDRVVLGRR 275 (275)
T ss_pred CCCCceEEEEEC
Confidence 225688888865
|
|
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0038 Score=61.08 Aligned_cols=74 Identities=20% Similarity=0.192 Sum_probs=48.1
Q ss_pred ccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccC--------------------hHHH
Q 009719 161 APRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY--------------------NATY 216 (527)
Q Consensus 161 Ap~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~--------------------~~~a 216 (527)
...|.++.+++.|+++ +....+..+|... ++++++||+|+|.--.++-... ...+
T Consensus 63 ~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~-~~~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (223)
T PRK14967 63 TAVDISRRAVRSARLNALLAGVDVDVRRGDWAR-AVEFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRL 141 (223)
T ss_pred EEEECCHHHHHHHHHHHHHhCCeeEEEECchhh-hccCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHH
Confidence 3346677778776653 4445556666544 4678899999997322111000 1236
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
+.++.|+|||||++++..+
T Consensus 142 l~~a~~~Lk~gG~l~~~~~ 160 (223)
T PRK14967 142 CDAAPALLAPGGSLLLVQS 160 (223)
T ss_pred HHHHHHhcCCCcEEEEEEe
Confidence 7889999999999998655
|
|
| >TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.00083 Score=63.82 Aligned_cols=94 Identities=18% Similarity=0.229 Sum_probs=56.8
Q ss_pred eeeEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhhhcc-----ccccccccCCCCCCCCCccchhhhcC
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIYDRG-----LIGVYHDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~eRG-----LiG~~hdwce~fstYPrtyDLiHa~~ 443 (527)
=.+|+|+|||.|.++.++... .+..+.+. +..+..+-++. +--+..|-.+ ++.-+.+||+|++..
T Consensus 40 ~~~vldiG~G~G~~~~~~~~~~~~~~~~~~iD~~----~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~~D~i~~~~ 114 (223)
T TIGR01934 40 GQKVLDVACGTGDLAIELAKSAPDRGKVTGVDFS----SEMLEVAKKKSELPLNIEFIQADAEA-LPFEDNSFDAVTIAF 114 (223)
T ss_pred CCeEEEeCCCCChhHHHHHHhcCCCceEEEEECC----HHHHHHHHHHhccCCCceEEecchhc-CCCCCCcEEEEEEee
Confidence 458999999999998887433 22222221 13333333332 1111122211 121136899999876
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.+... .+...++-++-++|+|||++++.+
T Consensus 115 ~~~~~---------~~~~~~l~~~~~~L~~gG~l~~~~ 143 (223)
T TIGR01934 115 GLRNV---------TDIQKALREMYRVLKPGGRLVILE 143 (223)
T ss_pred eeCCc---------ccHHHHHHHHHHHcCCCcEEEEEE
Confidence 66432 245678899999999999999864
|
Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases. |
| >PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0023 Score=62.58 Aligned_cols=64 Identities=14% Similarity=0.001 Sum_probs=47.3
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++.+++.|+++ |.. +.+..+|+...+++++.||+|++.....+ ...++.+.|||||+|++-.
T Consensus 108 E~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~~~~~~fD~I~~~~~~~~-------~~~~l~~~LkpgG~lvi~~ 176 (212)
T PRK13942 108 ERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGYEENAPYDRIYVTAAGPD-------IPKPLIEQLKDGGIMVIPV 176 (212)
T ss_pred eCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCcCCCcCEEEECCCccc-------chHHHHHhhCCCcEEEEEE
Confidence 5677888888764 443 56777887777777899999998876543 2346677999999999854
|
|
| >COG4976 Predicted methyltransferase (contains TPR repeat) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.00041 Score=69.88 Aligned_cols=89 Identities=18% Similarity=0.208 Sum_probs=70.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccC-CC-CCCCcccEEEecCcccccccChHHHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRR-LP-FPAFSFDIVHCSRCLIPFTAYNATYLIEV 220 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~-LP-FpD~SFDlV~cs~~l~hw~d~~~~aL~Ei 220 (527)
+|-.|..|.++-- .++..|+|++|++.|.|+|+--.+.++++.. |+ ..+.-||+|++..++....+-+. ++.-+
T Consensus 136 TGL~G~~lR~~a~---~ltGvDiS~nMl~kA~eKg~YD~L~~Aea~~Fl~~~~~er~DLi~AaDVl~YlG~Le~-~~~~a 211 (287)
T COG4976 136 TGLTGEALRDMAD---RLTGVDISENMLAKAHEKGLYDTLYVAEAVLFLEDLTQERFDLIVAADVLPYLGALEG-LFAGA 211 (287)
T ss_pred cCcccHhHHHHHh---hccCCchhHHHHHHHHhccchHHHHHHHHHHHhhhccCCcccchhhhhHHHhhcchhh-HHHHH
Confidence 4444445544422 4566699999999999999877777777653 44 56789999999999988777766 99999
Q ss_pred hhcccCCcEEEEecC
Q 009719 221 DRLLRPGGYLVISGP 235 (527)
Q Consensus 221 ~RVLRPGG~lviS~p 235 (527)
.+.|.|||.|.+|.-
T Consensus 212 a~~L~~gGlfaFSvE 226 (287)
T COG4976 212 AGLLAPGGLFAFSVE 226 (287)
T ss_pred HHhcCCCceEEEEec
Confidence 999999999999975
|
|
| >PRK04266 fibrillarin; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0063 Score=60.58 Aligned_cols=76 Identities=14% Similarity=0.194 Sum_probs=45.8
Q ss_pred cChHHHHHHHHHcC---CCcEEeeccccC----CCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCC
Q 009719 164 DSHKAQIQFALERG---IPAFVAMLGTRR----LPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 164 D~seaqvq~A~eRg---~pa~~~v~dae~----LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
|.++.|++.+.++. ..+.+..+|+.. .+++ ++||+|.+.... + +....+|.|+.|+|||||+|+++.+.
T Consensus 103 D~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~~~~~l~-~~~D~i~~d~~~-p--~~~~~~L~~~~r~LKpGG~lvI~v~~ 178 (226)
T PRK04266 103 EFAPRPMRELLEVAEERKNIIPILADARKPERYAHVV-EKVDVIYQDVAQ-P--NQAEIAIDNAEFFLKDGGYLLLAIKA 178 (226)
T ss_pred ECCHHHHHHHHHHhhhcCCcEEEECCCCCcchhhhcc-ccCCEEEECCCC-h--hHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 66777776443321 224455566543 2233 569999865321 1 12234789999999999999997552
Q ss_pred --CCCCCch
Q 009719 237 --VQWPKQD 243 (527)
Q Consensus 237 --~~~~~~~ 243 (527)
++|....
T Consensus 179 ~~~d~~~~~ 187 (226)
T PRK04266 179 RSIDVTKDP 187 (226)
T ss_pred ccccCcCCH
Confidence 4554433
|
|
| >PRK15001 SAM-dependent 23S ribosomal RNA mG1835 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.01 Score=63.60 Aligned_cols=130 Identities=14% Similarity=0.106 Sum_probs=70.7
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhh----cc-----ccccccccCCCCCCCC-Cccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD----RG-----LIGVYHDWCEPFSTYP-RTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e----RG-----LiG~~hdwce~fstYP-rtyDLiHa~ 442 (527)
..|+|+|||.|-.+.+|..+ |-. .|.-+|.. .-+..+-+ -| -+-+++ ...++..+ .+||+|=|+
T Consensus 230 ~~VLDLGCGtGvi~i~la~~~P~~--~V~~vD~S~~Av~~A~~N~~~n~~~~~~~v~~~~--~D~l~~~~~~~fDlIlsN 305 (378)
T PRK15001 230 GEIVDLGCGNGVIGLTLLDKNPQA--KVVFVDESPMAVASSRLNVETNMPEALDRCEFMI--NNALSGVEPFRFNAVLCN 305 (378)
T ss_pred CeEEEEeccccHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCcccCceEEEEE--ccccccCCCCCEEEEEEC
Confidence 47999999999999888654 221 11112221 11111111 01 122222 23344333 589999998
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC--CHHHHHHHHHHHhcCCceeEEecCCCCCCCCceEEEEEe
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD--SPEVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATK 520 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird--~~~~~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K 520 (527)
-.|..-. .-.+ =....++-+.-|+|+|||.+++-- ..++..+++++... +... ....+=+|+-++|
T Consensus 306 PPfh~~~---~~~~-~ia~~l~~~a~~~LkpGG~L~iV~nr~l~y~~~L~~~fg~----~~~v----a~~~kf~vl~a~k 373 (378)
T PRK15001 306 PPFHQQH---ALTD-NVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGN----CTTI----ATNNKFVVLKAVK 373 (378)
T ss_pred cCcccCc---cCCH-HHHHHHHHHHHHhcccCCEEEEEEecCcCHHHHHHHHcCC----ceEE----ccCCCEEEEEEEe
Confidence 6664211 0000 012457778899999999998863 34566667765442 2332 2223446777777
|
|
| >PRK05785 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0012 Score=65.35 Aligned_cols=105 Identities=15% Similarity=0.153 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhccccccccccCCCC
Q 009719 352 RRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDRGLIGVYHDWCEPF 429 (527)
Q Consensus 352 ~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eRGLiG~~hdwce~f 429 (527)
..|++.+-...... +.. -.+|||+|||+|-++..|.+. +. +|+-.|-. +-|...-+++ ...+.-.|.+
T Consensus 35 ~~wr~~~~~~l~~~---~~~--~~~VLDlGcGtG~~~~~l~~~~~~---~v~gvD~S~~Ml~~a~~~~--~~~~~d~~~l 104 (226)
T PRK05785 35 VRWRAELVKTILKY---CGR--PKKVLDVAAGKGELSYHFKKVFKY---YVVALDYAENMLKMNLVAD--DKVVGSFEAL 104 (226)
T ss_pred HHHHHHHHHHHHHh---cCC--CCeEEEEcCCCCHHHHHHHHhcCC---EEEEECCCHHHHHHHHhcc--ceEEechhhC
Confidence 56877665433211 122 258999999999999888766 33 34444543 5555555543 1122223444
Q ss_pred CCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCc
Q 009719 430 STYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEG 475 (527)
Q Consensus 430 stYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G 475 (527)
+.=..+||+|-++..+-.+ -+.+..|-||-|+|||.+
T Consensus 105 p~~d~sfD~v~~~~~l~~~---------~d~~~~l~e~~RvLkp~~ 141 (226)
T PRK05785 105 PFRDKSFDVVMSSFALHAS---------DNIEKVIAEFTRVSRKQV 141 (226)
T ss_pred CCCCCCEEEEEecChhhcc---------CCHHHHHHHHHHHhcCce
Confidence 4223899999998766433 245789999999999953
|
|
| >TIGR00740 methyltransferase, putative | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.00034 Score=68.74 Aligned_cols=95 Identities=12% Similarity=0.219 Sum_probs=55.8
Q ss_pred eeEeecCCCccchhhhccCC---C-eeEEEecCCCCCCchhHhhhc----cc---cc-cccccCCCCCCCC-Cccchhhh
Q 009719 375 RNIMDMNAFFGGFAAALTSD---P-VWVMNVVPARKSSTLSVIYDR----GL---IG-VYHDWCEPFSTYP-RTYDLIHV 441 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~-VwvMnvvp~~~~ntl~vi~eR----GL---iG-~~hdwce~fstYP-rtyDLiHa 441 (527)
.+|||+|||.|.++.+|.+. | .=+.-|=+. ++-|..+-++ +. +- +..|.+ .+| ..+|++.+
T Consensus 55 ~~iLDlGcG~G~~~~~l~~~~~~p~~~v~gvD~s--~~ml~~a~~~~~~~~~~~~v~~~~~d~~----~~~~~~~d~v~~ 128 (239)
T TIGR00740 55 SNVYDLGCSRGAATLSARRNINQPNVKIIGIDNS--QPMVERCRQHIAAYHSEIPVEILCNDIR----HVEIKNASMVIL 128 (239)
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCCCeEEEEeCC--HHHHHHHHHHHHhcCCCCCeEEEECChh----hCCCCCCCEEee
Confidence 47999999999998877543 2 222222221 1333332221 21 11 112222 223 46898888
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
...+..+. . =....+|-||-|+|+|||.+++.|.
T Consensus 129 ~~~l~~~~------~-~~~~~~l~~i~~~LkpgG~l~i~d~ 162 (239)
T TIGR00740 129 NFTLQFLP------P-EDRIALLTKIYEGLNPNGVLVLSEK 162 (239)
T ss_pred ecchhhCC------H-HHHHHHHHHHHHhcCCCeEEEEeec
Confidence 77665432 0 0135789999999999999999963
|
A simple BLAST search finds all members of this family and weaker hits to a large number of known and predicted methyltransferases. A single iteration with PSI-BLAST, keeping only clear members of the family, leads to a large number of highly significant hits to a set of known and predicted methyltransferases with a large repertoire of different specifities. This model is restricted to a subfamily found so far only in the Proteobacteria, sharing consistent length, full-length homology, and on average better than 35 % identity. It is reasonable to predict equivalent function within this subfamily. |
| >TIGR03534 RF_mod_PrmC protein-(glutamine-N5) methyltransferase, release factor-specific | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0093 Score=58.16 Aligned_cols=89 Identities=18% Similarity=0.288 Sum_probs=55.3
Q ss_pred hhccccccccC--CeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCccc------cc
Q 009719 143 VASFGGSMLSE--NILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLI------PF 209 (527)
Q Consensus 143 vgsfga~Ll~r--~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~------hw 209 (527)
.|.++..+... +. .+...|.++.+++.|+++ ++. +.+..++... ++++++||+|+|.--.+ ++
T Consensus 98 ~G~~~~~l~~~~~~~---~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~fD~Vi~npPy~~~~~~~~~ 173 (251)
T TIGR03534 98 SGAIALALAKERPDA---RVTAVDISPEALAVARKNAARLGLDNVTFLQSDWFE-PLPGGKFDLIVSNPPYIPEADIHLL 173 (251)
T ss_pred HhHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHcCCCeEEEEECchhc-cCcCCceeEEEECCCCCchhhhhhc
Confidence 34444445443 22 233346777888877643 444 5566677654 67789999999852211 11
Q ss_pred ccC-------------------hHHHHHHHhhcccCCcEEEEecC
Q 009719 210 TAY-------------------NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 210 ~d~-------------------~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
... -..++.++.|+|+|||.+++...
T Consensus 174 ~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~~~L~~gG~~~~~~~ 218 (251)
T TIGR03534 174 DPEVRFHEPRLALFGGEDGLDFYRRIIAQAPRLLKPGGWLLLEIG 218 (251)
T ss_pred ChhhhhcCCHHHHcCCCcHHHHHHHHHHHHHHhcccCCEEEEEEC
Confidence 100 01368899999999999999754
|
Members of this protein family are HemK (PrmC), a protein once thought to be involved in heme biosynthesis but now recognized to be a protein-glutamine methyltransferase that modifies the peptide chain release factors. All members of the seed alignment are encoded next to the release factor 1 gene (prfA) and confirmed by phylogenetic analysis. SIMBAL analysis (manuscript in prep.) shows the motif [LIV]PRx[DE]TE (in Escherichia coli, IPRPDTE) confers specificity for the release factors rather than for ribosomal protein L3. |
| >PF08242 Methyltransf_12: Methyltransferase domain; InterPro: IPR013217 Methyl transfer from the ubiquitous donor S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.00074 Score=56.99 Aligned_cols=91 Identities=18% Similarity=0.312 Sum_probs=43.7
Q ss_pred eecCCCccchhhhccCC--Ce--eEEEecCCCCCCchhHhhhccccc---cccccCCCCCCCC-CccchhhhcCcccccc
Q 009719 378 MDMNAFFGGFAAALTSD--PV--WVMNVVPARKSSTLSVIYDRGLIG---VYHDWCEPFSTYP-RTYDLIHVSGIESLIK 449 (527)
Q Consensus 378 mDm~ag~GgFaAaL~~~--~V--wvMnvvp~~~~ntl~vi~eRGLiG---~~hdwce~fstYP-rtyDLiHa~~~fs~~~ 449 (527)
||+|||.|.+...|.+. .. ..+-+-|.--...-+-+.+.+.-. +-.+--+.+...+ .+||+|.+..++....
T Consensus 1 LdiGcG~G~~~~~l~~~~~~~~~~~~D~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~vl~~l~ 80 (99)
T PF08242_consen 1 LDIGCGTGRLLRALLEELPDARYTGVDISPSMLERARERLAELGNDNFERLRFDVLDLFDYDPPESFDLVVASNVLHHLE 80 (99)
T ss_dssp -EESTTTS-TTTTHHHHC-EEEEEEEESSSSTTSTTCCCHHHCT---EEEEE--SSS---CCC----SEEEEE-TTS--S
T ss_pred CEeCccChHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhcCCcceeEEEeecCChhhcccccccceehhhhhHhhhh
Confidence 79999999999999766 33 222222221100001122222100 1111112233334 5999999999998663
Q ss_pred CCCCCCCCCcccccceeecccccCCcEE
Q 009719 450 NPGSNKNSCSLVDLMVEMDRMLRPEGTV 477 (527)
Q Consensus 450 ~~~~~~~rC~~~~illEmDRILRP~G~~ 477 (527)
++..+|-.+-++|+|||.+
T Consensus 81 ---------~~~~~l~~~~~~L~pgG~l 99 (99)
T PF08242_consen 81 ---------DIEAVLRNIYRLLKPGGIL 99 (99)
T ss_dssp ----------HHHHHHHHTTT-TSS-EE
T ss_pred ---------hHHHHHHHHHHHcCCCCCC
Confidence 3578899999999999985
|
The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] Fatty acid synthase (2.3.1.85 from EC), a biosynthetic enzyme catalysing the formation of long-chain fatty acids Glycine N-methyltransferase (2.1.1.20 from EC) which catalyses the SAM-dependent methylation of glycine to form sarcosine and may play a role in regulating the methylation potential of the cell [] Enniatin synthetase, involved in non-ribosomal biosynthesis of cyclohexadepsipeptidase, enniatin [] Histamine N-methyltransferase (2.1.1.8 from EC), a SAM-dependent histamine-inactivating enzyme [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ].; PDB: 2VZ8_A 2VZ9_A. |
| >TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0029 Score=68.07 Aligned_cols=82 Identities=20% Similarity=0.149 Sum_probs=53.4
Q ss_pred cCcChHHHHHHHHHc----CCCcEE--eeccccCCCC--CCCcccEEEe----cC--ccccccc-----C----------
Q 009719 162 PRDSHKAQIQFALER----GIPAFV--AMLGTRRLPF--PAFSFDIVHC----SR--CLIPFTA-----Y---------- 212 (527)
Q Consensus 162 p~D~seaqvq~A~eR----g~pa~~--~v~dae~LPF--pD~SFDlV~c----s~--~l~hw~d-----~---------- 212 (527)
..|.++.+++.++++ |+...+ ..+|+..+++ ++++||.|++ |. .+.+.++ .
T Consensus 267 a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~~~~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~l 346 (426)
T TIGR00563 267 ALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPSQWAENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAEL 346 (426)
T ss_pred EEeCCHHHHHHHHHHHHHcCCCeEEEEeccccccccccccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHH
Confidence 336777787776543 555333 4456655555 6789999984 32 2333222 1
Q ss_pred hHHHHHHHhhcccCCcEEEEecCCCCCCCch
Q 009719 213 NATYLIEVDRLLRPGGYLVISGPPVQWPKQD 243 (527)
Q Consensus 213 ~~~aL~Ei~RVLRPGG~lviS~pp~~~~~~~ 243 (527)
+..+|.++.|+|||||+|++|+-......+.
T Consensus 347 Q~~lL~~a~~~LkpgG~lvystcs~~~~Ene 377 (426)
T TIGR00563 347 QSEILDAIWPLLKTGGTLVYATCSVLPEENS 377 (426)
T ss_pred HHHHHHHHHHhcCCCcEEEEEeCCCChhhCH
Confidence 2349999999999999999999765544333
|
The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles. |
| >PRK10901 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0041 Score=67.00 Aligned_cols=100 Identities=19% Similarity=0.238 Sum_probs=61.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCC--CCCCcccEEE----ecCc--c----
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLP--FPAFSFDIVH----CSRC--L---- 206 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LP--FpD~SFDlV~----cs~~--l---- 206 (527)
.|+.+.++..+.-. ..+...|.++.+++.++++ |+.+.+..+|+..++ +++++||.|+ |+.. +
T Consensus 255 ~G~~t~~la~~~~~-~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcs~~G~~~~~p 333 (427)
T PRK10901 255 PGGKTAHILELAPQ-AQVVALDIDAQRLERVRENLQRLGLKATVIVGDARDPAQWWDGQPFDRILLDAPCSATGVIRRHP 333 (427)
T ss_pred CChHHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcCcccchhhcccCCCCEEEECCCCCcccccccCc
Confidence 44444455443210 1233337778888877654 555667778887765 4578999999 4421 1
Q ss_pred -cccccC----------hHHHHHHHhhcccCCcEEEEecCCCCCCCch
Q 009719 207 -IPFTAY----------NATYLIEVDRLLRPGGYLVISGPPVQWPKQD 243 (527)
Q Consensus 207 -~hw~d~----------~~~aL~Ei~RVLRPGG~lviS~pp~~~~~~~ 243 (527)
+.|... ...+|.++.++|||||++++|+-......+.
T Consensus 334 ~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpGG~lvystcs~~~~Ene 381 (427)
T PRK10901 334 DIKWLRRPEDIAALAALQSEILDALWPLLKPGGTLLYATCSILPEENE 381 (427)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeCCCChhhCH
Confidence 112211 1248999999999999999998655444333
|
|
| >PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0044 Score=60.68 Aligned_cols=82 Identities=16% Similarity=0.251 Sum_probs=57.6
Q ss_pred ccccccCCeeEEeeccCcChHHH----HHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHh
Q 009719 147 GGSMLSENILTLSFAPRDSHKAQ----IQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVD 221 (527)
Q Consensus 147 ga~Ll~r~V~~msiAp~D~seaq----vq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~ 221 (527)
+-||..+|..+.++ |.++.. .++|.++++++...+.|.....++ +.||+|+++.+++|..... ...+..|.
T Consensus 45 alyLA~~G~~VtAv---D~s~~al~~l~~~a~~~~l~i~~~~~Dl~~~~~~-~~yD~I~st~v~~fL~~~~~~~i~~~m~ 120 (192)
T PF03848_consen 45 ALYLASQGFDVTAV---DISPVALEKLQRLAEEEGLDIRTRVADLNDFDFP-EEYDFIVSTVVFMFLQRELRPQIIENMK 120 (192)
T ss_dssp HHHHHHTT-EEEEE---ESSHHHHHHHHHHHHHTT-TEEEEE-BGCCBS-T-TTEEEEEEESSGGGS-GGGHHHHHHHHH
T ss_pred HHHHHHCCCeEEEE---ECCHHHHHHHHHHHhhcCceeEEEEecchhcccc-CCcCEEEEEEEeccCCHHHHHHHHHHHH
Confidence 44788888766665 444433 345666788888888887777776 6899999988887776543 24889999
Q ss_pred hcccCCcEEEE
Q 009719 222 RLLRPGGYLVI 232 (527)
Q Consensus 222 RVLRPGG~lvi 232 (527)
.-|+|||++++
T Consensus 121 ~~~~pGG~~li 131 (192)
T PF03848_consen 121 AATKPGGYNLI 131 (192)
T ss_dssp HTEEEEEEEEE
T ss_pred hhcCCcEEEEE
Confidence 99999999988
|
When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A. |
| >PTZ00146 fibrillarin; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0035 Score=65.08 Aligned_cols=88 Identities=14% Similarity=0.146 Sum_probs=54.9
Q ss_pred hhccccccccC-----CeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccC---CCCCCCcccEEEecCcccccccChH
Q 009719 143 VASFGGSMLSE-----NILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRR---LPFPAFSFDIVHCSRCLIPFTAYNA 214 (527)
Q Consensus 143 vgsfga~Ll~r-----~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~---LPFpD~SFDlV~cs~~l~hw~d~~~ 214 (527)
.|.|..+|.+. -|.++++++. ..+.+++.|.+| ..+.....|+.. ++++..+||+|++... . ++...
T Consensus 143 ~G~~t~~lAdiVG~~G~VyAVD~s~r-~~~dLl~~ak~r-~NI~~I~~Da~~p~~y~~~~~~vDvV~~Dva-~--pdq~~ 217 (293)
T PTZ00146 143 SGTTVSHVSDLVGPEGVVYAVEFSHR-SGRDLTNMAKKR-PNIVPIIEDARYPQKYRMLVPMVDVIFADVA-Q--PDQAR 217 (293)
T ss_pred CCHHHHHHHHHhCCCCEEEEEECcHH-HHHHHHHHhhhc-CCCEEEECCccChhhhhcccCCCCEEEEeCC-C--cchHH
Confidence 45666666554 2556665532 123466777665 233455566532 3334568999998864 2 23344
Q ss_pred HHHHHHhhcccCCcEEEEecC
Q 009719 215 TYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 215 ~aL~Ei~RVLRPGG~lviS~p 235 (527)
.++.|+.|+|||||+|++.-.
T Consensus 218 il~~na~r~LKpGG~~vI~ik 238 (293)
T PTZ00146 218 IVALNAQYFLKNGGHFIISIK 238 (293)
T ss_pred HHHHHHHHhccCCCEEEEEEe
Confidence 577899999999999999643
|
|
| >PRK13256 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0046 Score=61.92 Aligned_cols=97 Identities=15% Similarity=0.127 Sum_probs=70.0
Q ss_pred CccccCCCCCCCCCCCCCccchhhhccccccccCCeeEEeeccCcChHHHHHHHHH-----------------cCCCcEE
Q 009719 120 PLCLIPPPRGYKIPVPWPESLSKVASFGGSMLSENILTLSFAPRDSHKAQIQFALE-----------------RGIPAFV 182 (527)
Q Consensus 120 ~~Clvp~P~gY~~P~~WP~Srd~vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~e-----------------Rg~pa~~ 182 (527)
.+.|||.=- +|+| +.+|.++|..++.+ |.|+.-|+.+.+ ++..+.+
T Consensus 45 ~rvLvPgCG---------kg~D-----~~~LA~~G~~V~Gv---DlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~ 107 (226)
T PRK13256 45 SVCLIPMCG---------CSID-----MLFFLSKGVKVIGI---ELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDDIEI 107 (226)
T ss_pred CeEEEeCCC---------ChHH-----HHHHHhCCCcEEEE---ecCHHHHHHHHHHcCCCcceecccccceeccCceEE
Confidence 467887654 6777 45677777655555 666666666543 2445677
Q ss_pred eeccccCCCCC---CCcccEEEecCcccccccChH-HHHHHHhhcccCCcEEEEe
Q 009719 183 AMLGTRRLPFP---AFSFDIVHCSRCLIPFTAYNA-TYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 183 ~v~dae~LPFp---D~SFDlV~cs~~l~hw~d~~~-~aL~Ei~RVLRPGG~lviS 233 (527)
.++|.-.|+.. -+.||+|.=..++++++.+.. .+..-|.++|+|||.+++-
T Consensus 108 ~~gD~f~l~~~~~~~~~fD~VyDra~~~Alpp~~R~~Y~~~l~~lL~pgg~llll 162 (226)
T PRK13256 108 YVADIFNLPKIANNLPVFDIWYDRGAYIALPNDLRTNYAKMMLEVCSNNTQILLL 162 (226)
T ss_pred EEccCcCCCccccccCCcCeeeeehhHhcCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 88998888753 268999987777888876543 5999999999999999874
|
|
| >TIGR01983 UbiG ubiquinone biosynthesis O-methyltransferase | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0017 Score=62.54 Aligned_cols=123 Identities=14% Similarity=0.176 Sum_probs=69.4
Q ss_pred cccchhhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCCCchhHhhhc----cc--
Q 009719 345 DVFEADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDR----GL-- 418 (527)
Q Consensus 345 ~~f~~d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~ntl~vi~eR----GL-- 418 (527)
..|....+.=..++....+.+...-....--+|||+|||.|.++..+.+...-++-+-+. +..+..+-++ |+
T Consensus 17 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~vLdlG~G~G~~~~~l~~~~~~v~~iD~s--~~~~~~a~~~~~~~~~~~ 94 (224)
T TIGR01983 17 GKFKPLHKMNPLRLDYIRDTIRKNKKPLFGLRVLDVGCGGGLLSEPLARLGANVTGIDAS--EENIEVAKLHAKKDPLLK 94 (224)
T ss_pred CcHHHHHHhhHHHHHHHHHHHHhcccCCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCC--HHHHHHHHHHHHHcCCCc
Confidence 335555554444555555544311001123489999999999988875543223222221 1222222221 22
Q ss_pred c----ccccccCCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 419 I----GVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 419 i----G~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+ +-..++.. ..+.+||+|.+..++.... +...+|-++.++|+|||++++.+
T Consensus 95 ~~~~~~d~~~~~~---~~~~~~D~i~~~~~l~~~~---------~~~~~l~~~~~~L~~gG~l~i~~ 149 (224)
T TIGR01983 95 IEYRCTSVEDLAE---KGAKSFDVVTCMEVLEHVP---------DPQAFIRACAQLLKPGGILFFST 149 (224)
T ss_pred eEEEeCCHHHhhc---CCCCCccEEEehhHHHhCC---------CHHHHHHHHHHhcCCCcEEEEEe
Confidence 1 22222221 1257899999987776432 34678999999999999999875
|
This model represents an O-methyltransferase believed to act at two points in the ubiquinone biosynthetic pathway in bacteria (UbiG) and fungi (COQ3). A separate methylase (MenG/UbiE) catalyzes the single C-methylation step. The most commonly used names for genes in this family do not indicate whether this gene is an O-methyl, or C-methyl transferase. |
| >PF05401 NodS: Nodulation protein S (NodS); InterPro: IPR008715 This entry consists of nodulation S (NodS) proteins | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.00036 Score=68.64 Aligned_cols=153 Identities=20% Similarity=0.282 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCC--CeeEEEecCCCCCCchhHhhhc--cccc---ccccc
Q 009719 353 RWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKSSTLSVIYDR--GLIG---VYHDW 425 (527)
Q Consensus 353 ~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~ntl~vi~eR--GLiG---~~hdw 425 (527)
.|-++.+ |-..|.-.+...+|+++++.|||-|-|.+.|..+ .+.++-++|. -|..+-+| |+-. .-.|-
T Consensus 24 ~~YE~~K-~~~~l~aaLp~~ry~~alEvGCs~G~lT~~LA~rCd~LlavDis~~----Al~~Ar~Rl~~~~~V~~~~~dv 98 (201)
T PF05401_consen 24 SWYERRK-YRATLLAALPRRRYRRALEVGCSIGVLTERLAPRCDRLLAVDISPR----ALARARERLAGLPHVEWIQADV 98 (201)
T ss_dssp -HHHHHH-HHHHHHHHHTTSSEEEEEEE--TTSHHHHHHGGGEEEEEEEES-HH----HHHHHHHHTTT-SSEEEEES-T
T ss_pred CHHHHHH-HHHHHHHhcCccccceeEecCCCccHHHHHHHHhhCceEEEeCCHH----HHHHHHHhcCCCCCeEEEECcC
Confidence 3444432 3333332378899999999999999999999665 5777766643 12222221 1110 01111
Q ss_pred CCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHH----------HHHHHHHHHhc
Q 009719 426 CEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPE----------VIDKVSRIANT 495 (527)
Q Consensus 426 ce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~----------~~~~i~~i~~~ 495 (527)
.+.. -+.+|||||++-++=-+. +.=.+..++-.|...|+|||.+|+-.-.+ =-+.|.+++..
T Consensus 99 p~~~--P~~~FDLIV~SEVlYYL~------~~~~L~~~l~~l~~~L~pgG~LV~g~~rd~~c~~wgh~~ga~tv~~~~~~ 170 (201)
T PF05401_consen 99 PEFW--PEGRFDLIVLSEVLYYLD------DAEDLRAALDRLVAALAPGGHLVFGHARDANCRRWGHAAGAETVLEMLQE 170 (201)
T ss_dssp TT-----SS-EEEEEEES-GGGSS------SHHHHHHHHHHHHHTEEEEEEEEEEEE-HHHHHHTT-S--HHHHHHHHHH
T ss_pred CCCC--CCCCeeEEEEehHhHcCC------CHHHHHHHHHHHHHHhCCCCEEEEEEecCCcccccCcccchHHHHHHHHH
Confidence 1211 138999999998876553 22334557778888999999999964211 12344455444
Q ss_pred CCceeEEecCCCCCCCCceEEEEE
Q 009719 496 VRWTAAVHDKEPGSNGREKILVAT 519 (527)
Q Consensus 496 l~W~~~~~~~e~~~~~~ekiLi~~ 519 (527)
.-=++.-..-. |....|.-|+++
T Consensus 171 ~~~~~~~~~~~-~~~~~~~~~~~~ 193 (201)
T PF05401_consen 171 HLTEVERVECR-GGSPNEDCLLAR 193 (201)
T ss_dssp HSEEEEEEEEE--SSTTSEEEEEE
T ss_pred HhhheeEEEEc-CCCCCCceEeee
Confidence 44444433222 223345555553
|
The products of the rhizobial nodulation genes are involved in the biosynthesis of lipochitin oligosaccharides (LCOs), which are host-specific signal molecules required for nodule formation. NodS is an S-adenosyl-L-methionine (SAM)-dependent methyltransferase involved in N methylation of LCOs. NodS uses N-deacetylated chitooligosaccharides, the products of the NodBC proteins, as its methyl acceptors [].; GO: 0008757 S-adenosylmethionine-dependent methyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0009877 nodulation; PDB: 3OFK_D 3OFJ_A. |
| >PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.00073 Score=58.23 Aligned_cols=90 Identities=26% Similarity=0.390 Sum_probs=56.8
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCC--CCCCcccEEEecCccccccc----
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLP--FPAFSFDIVHCSRCLIPFTA---- 211 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LP--FpD~SFDlV~cs~~l~hw~d---- 211 (527)
|.+...++.++ ...+...|.++..++.|+++ +. ...+.++|...++ +++++||+|+++-=......
T Consensus 12 G~~~~~~~~~~--~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~D~Iv~npP~~~~~~~~~~ 89 (117)
T PF13659_consen 12 GTFLLAALRRG--AARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVGDARDLPEPLPDGKFDLIVTNPPYGPRSGDKAA 89 (117)
T ss_dssp CHHHHHHHHHC--TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEESHHHHHHHTCTTT-EEEEEE--STTSBTT----
T ss_pred HHHHHHHHHHC--CCeEEEEEECHHHHHHHHHHHHHccCCceEEEEECchhhchhhccCceeEEEEECCCCccccccchh
Confidence 34444444444 12233336667777777654 22 3577888877775 89999999999854332211
Q ss_pred ---ChHHHHHHHhhcccCCcEEEEecC
Q 009719 212 ---YNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 212 ---~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
....+++++.|+|||||.+++..|
T Consensus 90 ~~~~~~~~~~~~~~~L~~gG~~~~~~~ 116 (117)
T PF13659_consen 90 LRRLYSRFLEAAARLLKPGGVLVFITP 116 (117)
T ss_dssp GGCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 112489999999999999998765
|
... |
| >PRK14901 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0044 Score=66.90 Aligned_cols=79 Identities=23% Similarity=0.211 Sum_probs=54.4
Q ss_pred cCcChHHHHHHHHHc----CCC-cEEeeccccCCC----CCCCcccEEEe----cC--ccccccc-----C---------
Q 009719 162 PRDSHKAQIQFALER----GIP-AFVAMLGTRRLP----FPAFSFDIVHC----SR--CLIPFTA-----Y--------- 212 (527)
Q Consensus 162 p~D~seaqvq~A~eR----g~p-a~~~v~dae~LP----FpD~SFDlV~c----s~--~l~hw~d-----~--------- 212 (527)
..|.++.+++.++++ |+. +.+..+|+..++ +.+++||.|++ |. ++.+-++ .
T Consensus 282 a~D~~~~rl~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~ 361 (434)
T PRK14901 282 AVDRSASRLKKLQENAQRLGLKSIKILAADSRNLLELKPQWRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAP 361 (434)
T ss_pred EEcCCHHHHHHHHHHHHHcCCCeEEEEeCChhhcccccccccccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHH
Confidence 337778888777543 554 456678887776 66789999994 32 2222221 0
Q ss_pred -hHHHHHHHhhcccCCcEEEEecCCCCCC
Q 009719 213 -NATYLIEVDRLLRPGGYLVISGPPVQWP 240 (527)
Q Consensus 213 -~~~aL~Ei~RVLRPGG~lviS~pp~~~~ 240 (527)
+...|.++.++|||||+|++|+-..+..
T Consensus 362 ~Q~~iL~~a~~~lkpgG~lvystcsi~~~ 390 (434)
T PRK14901 362 LQAELLESLAPLLKPGGTLVYATCTLHPA 390 (434)
T ss_pred HHHHHHHHHHHhcCCCCEEEEEeCCCChh
Confidence 2348999999999999999998755543
|
|
| >PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0019 Score=62.00 Aligned_cols=143 Identities=13% Similarity=0.218 Sum_probs=78.7
Q ss_pred cccCccccch--hhHHHHHHHHHHH-HHhhhccCCCCeeeEeecCCCccchhhhcc---CC--CeeEEEecCCCCCCchh
Q 009719 340 MKNGYDVFEA--DSRRWRRRVAYYK-NTLNVKLGTPAIRNIMDMNAFFGGFAAALT---SD--PVWVMNVVPARKSSTLS 411 (527)
Q Consensus 340 ~g~~~~~f~~--d~~~W~~~v~~Y~-~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~---~~--~VwvMnvvp~~~~ntl~ 411 (527)
+|+..+.|.. +...++..+..=. ..+. +..+ -.|+|+|||.|.|+.++. .. .|..+-.-| ..+.
T Consensus 8 ~~~~d~~~~~~~~~~~t~~~~r~~~l~~l~--~~~~--~~vlDlG~GtG~~s~~~a~~~~~~~~v~avD~~~----~~~~ 79 (198)
T PRK00377 8 PGIPDEEFERDEEIPMTKEEIRALALSKLR--LRKG--DMILDIGCGTGSVTVEASLLVGETGKVYAVDKDE----KAIN 79 (198)
T ss_pred CCCChHHHccCCCCCCCHHHHHHHHHHHcC--CCCc--CEEEEeCCcCCHHHHHHHHHhCCCCEEEEEECCH----HHHH
Confidence 4666667775 3347777664311 1121 2222 479999999999977542 22 344433322 2222
Q ss_pred Hhh----hccccc---c-ccccCCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-C
Q 009719 412 VIY----DRGLIG---V-YHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-S 482 (527)
Q Consensus 412 vi~----eRGLiG---~-~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~ 482 (527)
.+- .-|+.. + ..|..+.++..+..||+|.... ....+..++-++-|+|+|||.+++.- .
T Consensus 80 ~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~~D~V~~~~------------~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (198)
T PRK00377 80 LTRRNAEKFGVLNNIVLIKGEAPEILFTINEKFDRIFIGG------------GSEKLKEIISASWEIIKKGGRIVIDAIL 147 (198)
T ss_pred HHHHHHHHhCCCCCeEEEEechhhhHhhcCCCCCEEEECC------------CcccHHHHHHHHHHHcCCCcEEEEEeec
Confidence 221 123211 1 1222222222334688776531 12245678889999999999999842 4
Q ss_pred HHHHHHHHHHHhcCCceeEE
Q 009719 483 PEVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 483 ~~~~~~i~~i~~~l~W~~~~ 502 (527)
.+.+.++...++.+.++..+
T Consensus 148 ~~~~~~~~~~l~~~g~~~~~ 167 (198)
T PRK00377 148 LETVNNALSALENIGFNLEI 167 (198)
T ss_pred HHHHHHHHHHHHHcCCCeEE
Confidence 55677777777766665543
|
|
| >PTZ00146 fibrillarin; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0037 Score=64.85 Aligned_cols=98 Identities=11% Similarity=0.174 Sum_probs=60.0
Q ss_pred cCCCCeeeEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhhhc-cccccccccCCCCCCCC---Cccchh
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIYDR-GLIGVYHDWCEPFSTYP---RTYDLI 439 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~eR-GLiG~~hdwce~fstYP---rtyDLi 439 (527)
|+.+. +|||+|||.|+|...|.+. .|+.+-+.|.-..+.+.++-+| +++-+..|-+.+. .|+ -++|+|
T Consensus 130 IkpG~--~VLDLGaG~G~~t~~lAdiVG~~G~VyAVD~s~r~~~dLl~~ak~r~NI~~I~~Da~~p~-~y~~~~~~vDvV 206 (293)
T PTZ00146 130 IKPGS--KVLYLGAASGTTVSHVSDLVGPEGVVYAVEFSHRSGRDLTNMAKKRPNIVPIIEDARYPQ-KYRMLVPMVDVI 206 (293)
T ss_pred cCCCC--EEEEeCCcCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCCEEEECCccChh-hhhcccCCCCEE
Confidence 55563 7999999999988887543 3555544332122344444443 5666777765442 122 357777
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
=++-. .. + ....+++|+.|+|+|||+++|.
T Consensus 207 ~~Dva-~p--------d--q~~il~~na~r~LKpGG~~vI~ 236 (293)
T PTZ00146 207 FADVA-QP--------D--QARIVALNAQYFLKNGGHFIIS 236 (293)
T ss_pred EEeCC-Cc--------c--hHHHHHHHHHHhccCCCEEEEE
Confidence 44321 11 1 1234667999999999999994
|
|
| >TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0049 Score=59.93 Aligned_cols=65 Identities=17% Similarity=0.095 Sum_probs=46.5
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++.+++.|+++ ++. +.+..+|+...+...+.||+|++..+..+ ...++.+.|||||+|++...
T Consensus 109 D~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Ii~~~~~~~-------~~~~~~~~L~~gG~lv~~~~ 178 (215)
T TIGR00080 109 ERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWEPLAPYDRIYVTAAGPK-------IPEALIDQLKEGGILVMPVG 178 (215)
T ss_pred eCCHHHHHHHHHHHHHCCCCCeEEEECCcccCCcccCCCCEEEEcCCccc-------ccHHHHHhcCcCcEEEEEEc
Confidence 5567788877654 443 45666777665555679999998866433 45678899999999998653
|
Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. |
| >KOG1541 consensus Predicted protein carboxyl methylase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0062 Score=61.29 Aligned_cols=90 Identities=17% Similarity=0.190 Sum_probs=63.7
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeecc-ccCCCCCCCcccEEEecCccccccc-------ChH-
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLG-TRRLPFPAFSFDIVHCSRCLIPFTA-------YNA- 214 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~d-ae~LPFpD~SFDlV~cs~~l~hw~d-------~~~- 214 (527)
|--|..|.+.|-.-+.+ |+|..|+++|.++-+...+..+| .+.|||+.++||.|++-.++ +|.- ..+
T Consensus 62 GLSg~vL~~~Gh~wiGv---DiSpsML~~a~~~e~egdlil~DMG~GlpfrpGtFDg~ISISAv-QWLcnA~~s~~~P~~ 137 (270)
T KOG1541|consen 62 GLSGSVLSDSGHQWIGV---DISPSMLEQAVERELEGDLILCDMGEGLPFRPGTFDGVISISAV-QWLCNADKSLHVPKK 137 (270)
T ss_pred CcchheeccCCceEEee---cCCHHHHHHHHHhhhhcCeeeeecCCCCCCCCCccceEEEeeee-eeecccCccccChHH
Confidence 33345666777544444 88999999999876654444334 48999999999999976553 6632 111
Q ss_pred ---HHHHHHhhcccCCcEEEEecCCC
Q 009719 215 ---TYLIEVDRLLRPGGYLVISGPPV 237 (527)
Q Consensus 215 ---~aL~Ei~RVLRPGG~lviS~pp~ 237 (527)
.++.-++.+|++|++.++--.|.
T Consensus 138 Rl~~FF~tLy~~l~rg~raV~QfYpe 163 (270)
T KOG1541|consen 138 RLLRFFGTLYSCLKRGARAVLQFYPE 163 (270)
T ss_pred HHHHHhhhhhhhhccCceeEEEeccc
Confidence 25777999999999999986543
|
|
| >PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.00075 Score=67.15 Aligned_cols=98 Identities=7% Similarity=0.112 Sum_probs=56.3
Q ss_pred eeEeecCCCccchhhhccC---CC-eeEEEecCCCCCCchhHhhhc----cccccccccCCCCCCCC-CccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTS---DP-VWVMNVVPARKSSTLSVIYDR----GLIGVYHDWCEPFSTYP-RTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~---~~-VwvMnvvp~~~~ntl~vi~eR----GLiG~~hdwce~fstYP-rtyDLiHa~~~f 445 (527)
..|||+|||.|.++.+|.. .| .-+.-|=+. +.-+..+-+| |+-.-..=.+..+...| ..||+|-+...+
T Consensus 58 ~~vLDlGcGtG~~~~~l~~~~~~~~~~v~gvD~S--~~ml~~A~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~vv~~~~l 135 (247)
T PRK15451 58 TQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNS--PAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTL 135 (247)
T ss_pred CEEEEEcccCCHHHHHHHHhcCCCCCeEEEEeCC--HHHHHHHHHHHHhcCCCCCeEEEeCChhhCCCCCCCEEehhhHH
Confidence 4699999999999877753 23 323333222 1333333222 22111111122223333 458988776655
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.... .-....++-||-|+|+|||.+++.|
T Consensus 136 ~~l~-------~~~~~~~l~~i~~~LkpGG~l~l~e 164 (247)
T PRK15451 136 QFLE-------PSERQALLDKIYQGLNPGGALVLSE 164 (247)
T ss_pred HhCC-------HHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 5432 1223679999999999999999986
|
|
| >PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0015 Score=63.54 Aligned_cols=95 Identities=15% Similarity=0.210 Sum_probs=59.8
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cccccc--cccCCCCCCCCCccchhhhcCcccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLIGVY--HDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLiG~~--hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
..|||+|||.|.++..|.+... +++=++.. +.+..+-++ |+-..+ .++.+-....+-+||+|.++.++..
T Consensus 50 ~~vLdiG~G~G~~~~~l~~~~~---~v~~iD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~~~l~~ 126 (233)
T PRK05134 50 KRVLDVGCGGGILSESMARLGA---DVTGIDASEENIEVARLHALESGLKIDYRQTTAEELAAEHPGQFDVVTCMEMLEH 126 (233)
T ss_pred CeEEEeCCCCCHHHHHHHHcCC---eEEEEcCCHHHHHHHHHHHHHcCCceEEEecCHHHhhhhcCCCccEEEEhhHhhc
Confidence 3599999999999988876643 23333322 333333332 331112 2222111112368999999887775
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.. +...+|-++.|+|+|||.+++..
T Consensus 127 ~~---------~~~~~l~~~~~~L~~gG~l~v~~ 151 (233)
T PRK05134 127 VP---------DPASFVRACAKLVKPGGLVFFST 151 (233)
T ss_pred cC---------CHHHHHHHHHHHcCCCcEEEEEe
Confidence 42 34678899999999999999975
|
|
| >COG0500 SmtA SAM-dependent methyltransferases [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.01 Score=48.02 Aligned_cols=71 Identities=31% Similarity=0.379 Sum_probs=52.4
Q ss_pred CcChHHHHHHHHHcCC--C---cEEeeccccC--CCCCC-CcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 163 RDSHKAQIQFALERGI--P---AFVAMLGTRR--LPFPA-FSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 163 ~D~seaqvq~A~eRg~--p---a~~~v~dae~--LPFpD-~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
.|.+..+++.+..+.. . ..+..++... +||.+ .+||++ ++....|+.+ ....+.++.|+|+|||.++++.
T Consensus 78 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~-~~~~~~~~~~~l~~~g~~~~~~ 155 (257)
T COG0500 78 VDLSPEMLALARARAEGAGLGLVDFVVADALGGVLPFEDSASFDLV-ISLLVLHLLP-PAKALRELLRVLKPGGRLVLSD 155 (257)
T ss_pred EeCCHHHHHHHHhhhhhcCCCceEEEEeccccCCCCCCCCCceeEE-eeeeehhcCC-HHHHHHHHHHhcCCCcEEEEEe
Confidence 4667777776554331 1 2455566555 89998 599999 7777777766 4459999999999999999987
Q ss_pred C
Q 009719 235 P 235 (527)
Q Consensus 235 p 235 (527)
.
T Consensus 156 ~ 156 (257)
T COG0500 156 L 156 (257)
T ss_pred c
Confidence 6
|
|
| >PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0033 Score=61.47 Aligned_cols=133 Identities=16% Similarity=0.228 Sum_probs=69.0
Q ss_pred eeEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhhhccccccccccCCC---------CCCCCCccchhh
Q 009719 375 RNIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEP---------FSTYPRTYDLIH 440 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwce~---------fstYPrtyDLiH 440 (527)
.+|||+|||.|+|+..|.+. .|..+-+.|.... .|+.-+-.|..+. +. +.+||+|-
T Consensus 53 ~~VLDlG~GtG~~t~~l~~~~~~~~~V~aVDi~~~~~~--------~~v~~i~~D~~~~~~~~~i~~~~~--~~~~D~V~ 122 (209)
T PRK11188 53 MTVVDLGAAPGGWSQYAVTQIGDKGRVIACDILPMDPI--------VGVDFLQGDFRDELVLKALLERVG--DSKVQVVM 122 (209)
T ss_pred CEEEEEcccCCHHHHHHHHHcCCCceEEEEecccccCC--------CCcEEEecCCCChHHHHHHHHHhC--CCCCCEEe
Confidence 47999999999997666432 2333333331111 1221112222221 21 35789988
Q ss_pred hcCccccccCCCCC--CCCCcccccceeecccccCCcEEEEeC-----CHHHHHHHHHHHhcCCceeEEecCCCCCCCCc
Q 009719 441 VSGIESLIKNPGSN--KNSCSLVDLMVEMDRMLRPEGTVVVRD-----SPEVIDKVSRIANTVRWTAAVHDKEPGSNGRE 513 (527)
Q Consensus 441 a~~~fs~~~~~~~~--~~rC~~~~illEmDRILRP~G~~iird-----~~~~~~~i~~i~~~l~W~~~~~~~e~~~~~~e 513 (527)
++........+..+ ..-...+.+|-|+=|+|+|||.+++-. -.+.+..+++....... ..+.-.-....|
T Consensus 123 S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpGG~~vi~~~~~~~~~~~l~~l~~~f~~v~~---~Kp~ssr~~s~e 199 (209)
T PRK11188 123 SDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSLFTKVKV---RKPDSSRARSRE 199 (209)
T ss_pred cCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEEecCcCHHHHHHHHHhCceEEEE---ECCccccccCce
Confidence 86432211000000 000012568899999999999999942 23445555444444433 223333344578
Q ss_pred eEEEEEe
Q 009719 514 KILVATK 520 (527)
Q Consensus 514 kiLi~~K 520 (527)
..+||..
T Consensus 200 ~~~~~~~ 206 (209)
T PRK11188 200 VYIVATG 206 (209)
T ss_pred eEEEeec
Confidence 8888863
|
|
| >PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0075 Score=57.15 Aligned_cols=84 Identities=13% Similarity=0.030 Sum_probs=52.8
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCCCC
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQ 238 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp~~ 238 (527)
|.++.+++.|+++ ++. ..+..+++. .+++ ++||+|++.....++ ...+.++.|+|||||++++....
T Consensus 62 D~s~~~~~~a~~n~~~~~~~~i~~~~~d~~-~~~~-~~~D~v~~~~~~~~~----~~~l~~~~~~Lk~gG~lv~~~~~-- 133 (187)
T PRK08287 62 ERNPDALRLIKENRQRFGCGNIDIIPGEAP-IELP-GKADAIFIGGSGGNL----TAIIDWSLAHLHPGGRLVLTFIL-- 133 (187)
T ss_pred ECCHHHHHHHHHHHHHhCCCCeEEEecCch-hhcC-cCCCEEEECCCccCH----HHHHHHHHHhcCCCeEEEEEEec--
Confidence 6667777777643 332 344445552 3454 689999998654332 23899999999999999997531
Q ss_pred CCCchhHHHHHHHHHHhcceE
Q 009719 239 WPKQDKEWADLQAVARALCYE 259 (527)
Q Consensus 239 ~~~~~~~w~~i~~l~~~mcW~ 259 (527)
......+.++.++..++
T Consensus 134 ----~~~~~~~~~~l~~~g~~ 150 (187)
T PRK08287 134 ----LENLHSALAHLEKCGVS 150 (187)
T ss_pred ----HhhHHHHHHHHHHCCCC
Confidence 11223444555555554
|
|
| >PF03291 Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 This is a family of viral mRNA capping enzymes | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.004 Score=65.53 Aligned_cols=74 Identities=30% Similarity=0.381 Sum_probs=52.4
Q ss_pred cCcChHHHHHHHHHcC---------------CCcEEeecccc------CCCCCCCcccEEEecCcccccccChH---HHH
Q 009719 162 PRDSHKAQIQFALERG---------------IPAFVAMLGTR------RLPFPAFSFDIVHCSRCLIPFTAYNA---TYL 217 (527)
Q Consensus 162 p~D~seaqvq~A~eRg---------------~pa~~~v~dae------~LPFpD~SFDlV~cs~~l~hw~d~~~---~aL 217 (527)
..|++..-|+.|++|- ..+.+..+|.. .++.+...||+|-|..++|+--.... .+|
T Consensus 90 g~Dis~~si~ea~~Ry~~~~~~~~~~~~~~~f~a~f~~~D~f~~~l~~~~~~~~~~FDvVScQFalHY~Fese~~ar~~l 169 (331)
T PF03291_consen 90 GIDISEESIEEARERYKQLKKRNNSKQYRFDFIAEFIAADCFSESLREKLPPRSRKFDVVSCQFALHYAFESEEKARQFL 169 (331)
T ss_dssp EEES-HHHHHHHHHHHHHHHTSTT-HTSEECCEEEEEESTTCCSHHHCTSSSTTS-EEEEEEES-GGGGGSSHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHHHhccccccccccccchhheeccccccchhhhhccccCCCcceeehHHHHHHhcCCHHHHHHHH
Confidence 3467777788887764 23455666542 23444569999999999987666553 389
Q ss_pred HHHhhcccCCcEEEEecC
Q 009719 218 IEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~p 235 (527)
.-+...|||||+|+.++|
T Consensus 170 ~Nvs~~Lk~GG~FIgT~~ 187 (331)
T PF03291_consen 170 KNVSSLLKPGGYFIGTTP 187 (331)
T ss_dssp HHHHHTEEEEEEEEEEEE
T ss_pred HHHHHhcCCCCEEEEEec
Confidence 999999999999999998
|
The enzyme catalyses the first two reactions in the mRNA cap formation pathway. It is a heterodimer consisting of a large and small subunit. This entry is the large subunit. ; GO: 0006370 mRNA capping; PDB: 3EPP_A 3BGV_C 2VDW_C 1RI5_A 1RI3_A 1RI1_A 1Z3C_A 1RI2_A 2HV9_A 1RI4_A. |
| >PRK14904 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0022 Score=69.44 Aligned_cols=77 Identities=21% Similarity=0.233 Sum_probs=52.2
Q ss_pred CcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEe----cCc--c-----cccccC----------hHHH
Q 009719 163 RDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHC----SRC--L-----IPFTAY----------NATY 216 (527)
Q Consensus 163 ~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~c----s~~--l-----~hw~d~----------~~~a 216 (527)
.|.++.+++.++++ |+. +.+..+|+..++ ++++||+|++ +-. + ++|... ...+
T Consensus 281 vD~s~~~l~~~~~~~~~~g~~~v~~~~~Da~~~~-~~~~fD~Vl~D~Pcsg~g~~~r~p~~~~~~~~~~~~~l~~~q~~i 359 (445)
T PRK14904 281 VDRYPQKLEKIRSHASALGITIIETIEGDARSFS-PEEQPDAILLDAPCTGTGVLGRRAELRWKLTPEKLAELVGLQAEL 359 (445)
T ss_pred EECCHHHHHHHHHHHHHhCCCeEEEEeCcccccc-cCCCCCEEEEcCCCCCcchhhcCcchhhcCCHHHHHHHHHHHHHH
Confidence 37778888777643 554 456677887775 6789999994 221 1 112211 2248
Q ss_pred HHHHhhcccCCcEEEEecCCCCCC
Q 009719 217 LIEVDRLLRPGGYLVISGPPVQWP 240 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~pp~~~~ 240 (527)
|.++.++|||||++++++-.....
T Consensus 360 L~~a~~~lkpgG~lvystcs~~~~ 383 (445)
T PRK14904 360 LDHAASLLKPGGVLVYATCSIEPE 383 (445)
T ss_pred HHHHHHhcCCCcEEEEEeCCCChh
Confidence 999999999999999999755443
|
|
| >TIGR00091 tRNA (guanine-N(7)-)-methyltransferase | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0019 Score=61.96 Aligned_cols=124 Identities=9% Similarity=0.112 Sum_probs=67.2
Q ss_pred eeeEeecCCCccchhhhccCC--CeeEEEecCCCCCCchhH----hhhccccccccccCCCC--C--CCC-Cccchhhhc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKSSTLSV----IYDRGLIGVYHDWCEPF--S--TYP-RTYDLIHVS 442 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~ntl~v----i~eRGLiG~~hdwce~f--s--tYP-rtyDLiHa~ 442 (527)
=+.|||+|||.|.|+.+|..+ ..-+..|-... .-+.. +-..|+-.+..--+... . .+| .++|.|+..
T Consensus 17 ~~~ilDiGcG~G~~~~~la~~~p~~~v~gvD~~~--~~l~~a~~~~~~~~l~ni~~i~~d~~~~~~~~~~~~~~d~v~~~ 94 (194)
T TIGR00091 17 APLHLEIGCGKGRFLIDMAKQNPDKNFLGIEIHT--PIVLAANNKANKLGLKNLHVLCGDANELLDKFFPDGSLSKVFLN 94 (194)
T ss_pred CceEEEeCCCccHHHHHHHHhCCCCCEEEEEeeH--HHHHHHHHHHHHhCCCCEEEEccCHHHHHHhhCCCCceeEEEEE
Confidence 357999999999999888654 22222222221 11211 22334411111111111 1 145 488988765
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEe-CCHHHHHHHHHHH-hcCCcee
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR-DSPEVIDKVSRIA-NTVRWTA 500 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir-d~~~~~~~i~~i~-~~l~W~~ 500 (527)
.- ..|......+.|.....+|-|+-|+|+|||.+++. |..+....+.+.+ ..-+|+.
T Consensus 95 ~p-dpw~k~~h~~~r~~~~~~l~~~~r~LkpgG~l~~~td~~~~~~~~~~~~~~~~~f~~ 153 (194)
T TIGR00091 95 FP-DPWPKKRHNKRRITQPHFLKEYANVLKKGGVIHFKTDNEPLFEDMLKVLSENDLFEN 153 (194)
T ss_pred CC-CcCCCCCccccccCCHHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhCCCeEe
Confidence 21 22321111234666678899999999999999887 5555566554443 3333554
|
In E. coli, this protein flanks the DNA repair protein MutY, also called micA. |
| >COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.001 Score=66.98 Aligned_cols=112 Identities=25% Similarity=0.330 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccc-cccc-----cc
Q 009719 352 RRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGL-IGVY-----HD 424 (527)
Q Consensus 352 ~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGL-iG~~-----hd 424 (527)
..|++.+ .+.+. +. .=-+|||.+||+|=+|..+.+.-= .-.|+-.|-. +-|.+.-+|-- .|.. +-
T Consensus 37 ~~Wr~~~---i~~~~--~~--~g~~vLDva~GTGd~a~~~~k~~g-~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~ 108 (238)
T COG2226 37 RLWRRAL---ISLLG--IK--PGDKVLDVACGTGDMALLLAKSVG-TGEVVGLDISESMLEVAREKLKKKGVQNVEFVVG 108 (238)
T ss_pred HHHHHHH---HHhhC--CC--CCCEEEEecCCccHHHHHHHHhcC-CceEEEEECCHHHHHHHHHHhhccCccceEEEEe
Confidence 6677655 22222 22 235799999999999998855431 3344444433 66666666654 1211 11
Q ss_pred cCCCCCCCC-CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 425 WCEPFSTYP-RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 425 wce~fstYP-rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
==|.++ || .|||++=++..+-... ++...|=||-|||+|||-+++-+
T Consensus 109 dAe~LP-f~D~sFD~vt~~fglrnv~---------d~~~aL~E~~RVlKpgG~~~vle 156 (238)
T COG2226 109 DAENLP-FPDNSFDAVTISFGLRNVT---------DIDKALKEMYRVLKPGGRLLVLE 156 (238)
T ss_pred chhhCC-CCCCccCEEEeeehhhcCC---------CHHHHHHHHHHhhcCCeEEEEEE
Confidence 124456 55 9999998886665442 46789999999999999887765
|
|
| >PF05148 Methyltransf_8: Hypothetical methyltransferase; InterPro: IPR007823 This family consists of uncharacterised eukaryotic proteins which are related to S-adenosyl-L-methionine-dependent methyltransferases | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0054 Score=61.06 Aligned_cols=137 Identities=16% Similarity=0.260 Sum_probs=74.2
Q ss_pred cccchhhHHHHHHHHHHHHHhhh-----------cc-CCCCeeeEeecCCCccchhhhccCC-CeeEEEecCCCCCCchh
Q 009719 345 DVFEADSRRWRRRVAYYKNTLNV-----------KL-GTPAIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKSSTLS 411 (527)
Q Consensus 345 ~~f~~d~~~W~~~v~~Y~~~l~~-----------~i-~~~~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~ntl~ 411 (527)
+.|++|-+.|..-=..|..++.. .| +...--.|-|||||-|-.|+++.+. .|.-...|..+..=|.
T Consensus 32 ~lf~~dP~~F~~YH~Gfr~Qv~~WP~nPvd~iI~~l~~~~~~~viaD~GCGdA~la~~~~~~~~V~SfDLva~n~~Vta- 110 (219)
T PF05148_consen 32 KLFQEDPELFDIYHEGFRQQVKKWPVNPVDVIIEWLKKRPKSLVIADFGCGDAKLAKAVPNKHKVHSFDLVAPNPRVTA- 110 (219)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHCTSSS-HHHHHHHHHCTS-TTS-EEEES-TT-HHHHH--S---EEEEESS-SSTTEEE-
T ss_pred HHHHhCHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHhcCCCEEEEECCCchHHHHHhcccCceEEEeeccCCCCCEEE-
Confidence 55777777776544445544321 11 2233458999999999999987533 4666666655432100
Q ss_pred HhhhccccccccccCCC--CCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHHH---H
Q 009719 412 VIYDRGLIGVYHDWCEP--FSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEV---I 486 (527)
Q Consensus 412 vi~eRGLiG~~hdwce~--fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~---~ 486 (527)
|.- .|-=.-+.|++=+ |+|+- +-+..++|.|-.|||||||.++|-+-.+- +
T Consensus 111 --------------cdia~vPL~~~svDv~Vf--cLSLM--------GTn~~~fi~EA~RvLK~~G~L~IAEV~SRf~~~ 166 (219)
T PF05148_consen 111 --------------CDIANVPLEDESVDVAVF--CLSLM--------GTNWPDFIREANRVLKPGGILKIAEVKSRFENV 166 (219)
T ss_dssp --------------S-TTS-S--TT-EEEEEE--ES-----------SS-HHHHHHHHHHHEEEEEEEEEEEEGGG-S-H
T ss_pred --------------ecCccCcCCCCceeEEEE--Ehhhh--------CCCcHHHHHHHHheeccCcEEEEEEecccCcCH
Confidence 111 1111267777543 56643 34568999999999999999999875443 3
Q ss_pred HHHHHHHhcCCceeEEecCC
Q 009719 487 DKVSRIANTVRWTAAVHDKE 506 (527)
Q Consensus 487 ~~i~~i~~~l~W~~~~~~~e 506 (527)
+..-+..+++-.+....|..
T Consensus 167 ~~F~~~~~~~GF~~~~~d~~ 186 (219)
T PF05148_consen 167 KQFIKALKKLGFKLKSKDES 186 (219)
T ss_dssp HHHHHHHHCTTEEEEEEE--
T ss_pred HHHHHHHHHCCCeEEecccC
Confidence 44445577888887776543
|
; GO: 0008168 methyltransferase activity; PDB: 2ZFU_B. |
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0012 Score=65.98 Aligned_cols=93 Identities=16% Similarity=0.188 Sum_probs=53.7
Q ss_pred eeEeecCCCccchhhhc---cCCC--eeEEEecCCCCCCchhHhhhc----cccc--c-ccccCCCCCCCCCccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAAL---TSDP--VWVMNVVPARKSSTLSVIYDR----GLIG--V-YHDWCEPFSTYPRTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL---~~~~--VwvMnvvp~~~~ntl~vi~eR----GLiG--~-~hdwce~fstYPrtyDLiHa~ 442 (527)
.+|||+|||.|..+..+ .... |..+-+- ++.+..+-++ |+-. . ..|. +.++.-..+||+|++.
T Consensus 79 ~~VLDiG~G~G~~~~~~a~~~g~~~~v~gvD~s----~~~l~~A~~~~~~~g~~~v~~~~~d~-~~l~~~~~~fD~Vi~~ 153 (272)
T PRK11873 79 ETVLDLGSGGGFDCFLAARRVGPTGKVIGVDMT----PEMLAKARANARKAGYTNVEFRLGEI-EALPVADNSVDVIISN 153 (272)
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEECCC----HHHHHHHHHHHHHcCCCCEEEEEcch-hhCCCCCCceeEEEEc
Confidence 49999999998744322 2222 3333221 1334443332 3210 0 0122 2222123799999988
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.++.... +...++-|+=|+|||||.+++.|
T Consensus 154 ~v~~~~~---------d~~~~l~~~~r~LkpGG~l~i~~ 183 (272)
T PRK11873 154 CVINLSP---------DKERVFKEAFRVLKPGGRFAISD 183 (272)
T ss_pred CcccCCC---------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 7765432 23578999999999999999974
|
|
| >PRK10611 chemotaxis methyltransferase CheR; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0036 Score=64.70 Aligned_cols=53 Identities=23% Similarity=0.352 Sum_probs=41.6
Q ss_pred eeccccCCCCC-CCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 183 AMLGTRRLPFP-AFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 183 ~v~dae~LPFp-D~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+.+...-||+ .+.||+|+|..+++|+.... ..++..+.+.|+|||+|++...
T Consensus 209 ~~~NL~~~~~~~~~~fD~I~cRNvliyF~~~~~~~vl~~l~~~L~pgG~L~lG~s 263 (287)
T PRK10611 209 QQLNLLAKQWAVPGPFDAIFCRNVMIYFDKTTQERILRRFVPLLKPDGLLFAGHS 263 (287)
T ss_pred EcccCCCCCCccCCCcceeeHhhHHhcCCHHHHHHHHHHHHHHhCCCcEEEEeCc
Confidence 34454444554 68999999999999996654 3599999999999999988664
|
|
| >COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0065 Score=62.79 Aligned_cols=85 Identities=18% Similarity=0.261 Sum_probs=58.9
Q ss_pred hccccccccC-CeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccCh-HH
Q 009719 144 ASFGGSMLSE-NILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-AT 215 (527)
Q Consensus 144 gsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~ 215 (527)
|+.+-|+..+ ||.++.+ ++|++|.+.|++| |.. +.+.. +..+...+.||-|++..+++|+.... ..
T Consensus 84 G~l~~~aA~~y~v~V~Gv---TlS~~Q~~~~~~r~~~~gl~~~v~v~l---~d~rd~~e~fDrIvSvgmfEhvg~~~~~~ 157 (283)
T COG2230 84 GGLAIYAAEEYGVTVVGV---TLSEEQLAYAEKRIAARGLEDNVEVRL---QDYRDFEEPFDRIVSVGMFEHVGKENYDD 157 (283)
T ss_pred hHHHHHHHHHcCCEEEEe---eCCHHHHHHHHHHHHHcCCCcccEEEe---ccccccccccceeeehhhHHHhCcccHHH
Confidence 3444444444 6766666 5688998888764 655 33332 33444445599999999999997632 34
Q ss_pred HHHHHhhcccCCcEEEEec
Q 009719 216 YLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~ 234 (527)
++.-++++|+|||.+++-+
T Consensus 158 ff~~~~~~L~~~G~~llh~ 176 (283)
T COG2230 158 FFKKVYALLKPGGRMLLHS 176 (283)
T ss_pred HHHHHHhhcCCCceEEEEE
Confidence 9999999999999999855
|
|
| >PRK06202 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.0043 Score=60.77 Aligned_cols=103 Identities=12% Similarity=0.148 Sum_probs=61.7
Q ss_pred CCCCeeeEeecCCCccchhhhccCC---CeeEEEecCCCCC-CchhHhhhccc-cc--cccccCCCCCCCCCccchhhhc
Q 009719 370 GTPAIRNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKS-STLSVIYDRGL-IG--VYHDWCEPFSTYPRTYDLIHVS 442 (527)
Q Consensus 370 ~~~~iRnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~-ntl~vi~eRGL-iG--~~hdwce~fstYPrtyDLiHa~ 442 (527)
....-.+|+|+|||.|.++.+|.+. .-...+|+-+|-. +.+..+.++.- -+ ...-=++.++.-+.+||+|-++
T Consensus 57 ~~~~~~~iLDlGcG~G~~~~~L~~~~~~~g~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~l~~~~~~fD~V~~~ 136 (232)
T PRK06202 57 SADRPLTLLDIGCGGGDLAIDLARWARRDGLRLEVTAIDPDPRAVAFARANPRRPGVTFRQAVSDELVAEGERFDVVTSN 136 (232)
T ss_pred CCCCCcEEEEeccCCCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHhccccCCCeEEEEecccccccCCCccEEEEC
Confidence 3344568999999999998777431 0111234445543 55555555421 01 1111123344435899999999
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.+|.+.. +. .+..+|-||-|++| |.+++.|
T Consensus 137 ~~lhh~~------d~-~~~~~l~~~~r~~~--~~~~i~d 166 (232)
T PRK06202 137 HFLHHLD------DA-EVVRLLADSAALAR--RLVLHND 166 (232)
T ss_pred CeeecCC------hH-HHHHHHHHHHHhcC--eeEEEec
Confidence 8887653 11 23468899999999 6666665
|
|
| >PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.012 Score=56.46 Aligned_cols=68 Identities=15% Similarity=0.147 Sum_probs=46.4
Q ss_pred cChHHHHHHHHHc----CC--CcEEeeccccC-CCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GI--PAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~--pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++.+++.|+++ ++ .+.+..+++.. ++..++.||.|++... ..+ ...+|.++.|+|||||++++...
T Consensus 72 D~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~~D~V~~~~~---~~~-~~~~l~~~~~~LkpgG~lv~~~~ 146 (198)
T PRK00377 72 DKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEKFDRIFIGGG---SEK-LKEIISASWEIIKKGGRIVIDAI 146 (198)
T ss_pred ECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCCCCEEEECCC---ccc-HHHHHHHHHHHcCCCcEEEEEee
Confidence 6677777777644 42 23455566654 4555678999997532 222 23499999999999999998665
|
|
| >PRK04266 fibrillarin; Provisional | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.0073 Score=60.15 Aligned_cols=94 Identities=15% Similarity=0.233 Sum_probs=50.5
Q ss_pred cCCCCeeeEeecCCCccchhhhccCC----CeeEEEecCCCCCCchh----Hhhhc-cccccccccCCCCC--CCCCccc
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSD----PVWVMNVVPARKSSTLS----VIYDR-GLIGVYHDWCEPFS--TYPRTYD 437 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~----~VwvMnvvp~~~~ntl~----vi~eR-GLiG~~hdwce~fs--tYPrtyD 437 (527)
++.+. .|||+|||.|++...|.+. .|+.+-+-| .-|. .+-+| ++.-+..|-.++.. ..+.+||
T Consensus 70 i~~g~--~VlD~G~G~G~~~~~la~~v~~g~V~avD~~~----~ml~~l~~~a~~~~nv~~i~~D~~~~~~~~~l~~~~D 143 (226)
T PRK04266 70 IKKGS--KVLYLGAASGTTVSHVSDIVEEGVVYAVEFAP----RPMRELLEVAEERKNIIPILADARKPERYAHVVEKVD 143 (226)
T ss_pred CCCCC--EEEEEccCCCHHHHHHHHhcCCCeEEEEECCH----HHHHHHHHHhhhcCCcEEEECCCCCcchhhhccccCC
Confidence 55553 6999999999999888654 244443322 2222 22222 23333334333211 1234577
Q ss_pred hhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEE
Q 009719 438 LIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVV 479 (527)
Q Consensus 438 LiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~ii 479 (527)
.|=++ .. ..+ ....+|-|+-|+|+|||.++|
T Consensus 144 ~i~~d-----~~----~p~--~~~~~L~~~~r~LKpGG~lvI 174 (226)
T PRK04266 144 VIYQD-----VA----QPN--QAEIAIDNAEFFLKDGGYLLL 174 (226)
T ss_pred EEEEC-----CC----Chh--HHHHHHHHHHHhcCCCcEEEE
Confidence 65211 10 000 012246699999999999999
|
|
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.0043 Score=60.65 Aligned_cols=124 Identities=15% Similarity=0.165 Sum_probs=64.1
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc--cccccccCCCCCCCCCccchhhhcCcccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL--IGVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL--iG~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
-.|||+|||.|.++..+...+.- +|+-+|-. ..+..+-+ .|+ --+..|+.+.+. ...||+|.++--|..
T Consensus 38 ~~vLDlGcG~G~~~~~la~~~~~--~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~~~--~~~fD~Vi~npPy~~ 113 (223)
T PRK14967 38 RRVLDLCTGSGALAVAAAAAGAG--SVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARAVE--FRPFDVVVSNPPYVP 113 (223)
T ss_pred CeEEEecCCHHHHHHHHHHcCCC--eEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhhcc--CCCeeEEEECCCCCC
Confidence 47999999999998877654321 22222222 33332222 233 112234444332 368999998744331
Q ss_pred ccCCC-----------CCC-CCCcccccceeecccccCCcEEEEe-CCHHHHHHHHHHHhcCCceeEE
Q 009719 448 IKNPG-----------SNK-NSCSLVDLMVEMDRMLRPEGTVVVR-DSPEVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 448 ~~~~~-----------~~~-~rC~~~~illEmDRILRP~G~~iir-d~~~~~~~i~~i~~~l~W~~~~ 502 (527)
-.... .+. ....+..++-++-|+|+|||.+++- .+.....++.+++++-.|+...
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~ 181 (223)
T PRK14967 114 APPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQSELSGVERTLTRLSEAGLDAEV 181 (223)
T ss_pred CCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEEecccCHHHHHHHHHHCCCCeEE
Confidence 10000 000 1122456777899999999999983 2222233444444444554433
|
|
| >PRK14903 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.014 Score=63.24 Aligned_cols=78 Identities=21% Similarity=0.270 Sum_probs=53.5
Q ss_pred CcChHHHHHHHHHc----CCC-cEEeeccccCCC-CCCCcccEEEecC-c--cccccc------------------ChHH
Q 009719 163 RDSHKAQIQFALER----GIP-AFVAMLGTRRLP-FPAFSFDIVHCSR-C--LIPFTA------------------YNAT 215 (527)
Q Consensus 163 ~D~seaqvq~A~eR----g~p-a~~~v~dae~LP-FpD~SFDlV~cs~-~--l~hw~d------------------~~~~ 215 (527)
.|.++.+++.++++ |+. +.+.++|+..++ +.+++||.|++.- | +-.+.. ....
T Consensus 268 ~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da~~l~~~~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~ 347 (431)
T PRK14903 268 VDISREKIQLVEKHAKRLKLSSIEIKIADAERLTEYVQDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLR 347 (431)
T ss_pred EECCHHHHHHHHHHHHHcCCCeEEEEECchhhhhhhhhccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHH
Confidence 37778888777644 554 456778888887 6678999998521 1 111111 1233
Q ss_pred HHHHHhhcccCCcEEEEecCCCCCC
Q 009719 216 YLIEVDRLLRPGGYLVISGPPVQWP 240 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~pp~~~~ 240 (527)
.|.++.+.|||||++++|+-.....
T Consensus 348 iL~~a~~~LkpGG~LvYsTCs~~~e 372 (431)
T PRK14903 348 IVSQAWKLLEKGGILLYSTCTVTKE 372 (431)
T ss_pred HHHHHHHhcCCCCEEEEEECCCChh
Confidence 7999999999999999999755544
|
|
| >PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.0058 Score=63.43 Aligned_cols=128 Identities=18% Similarity=0.250 Sum_probs=69.9
Q ss_pred eeEeecCCCccch--hhhcc-CCCeeEEEecCCCCCCchhHhhhcccccccc-ccCCCCCCCCCccchhhhcCccccccC
Q 009719 375 RNIMDMNAFFGGF--AAALT-SDPVWVMNVVPARKSSTLSVIYDRGLIGVYH-DWCEPFSTYPRTYDLIHVSGIESLIKN 450 (527)
Q Consensus 375 RnvmDm~ag~GgF--aAaL~-~~~VwvMnvvp~~~~ntl~vi~eRGLiG~~h-dwce~fstYPrtyDLiHa~~~fs~~~~ 450 (527)
..|||+|||+|-. ||++. -..|.-.-+=|..-.++..-+-.-|+-.-.. .-.+.+.. ..||||=|+=+....
T Consensus 163 ~~vLDvG~GSGILaiaA~klGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~~~~--~~~dlvvANI~~~vL-- 238 (295)
T PF06325_consen 163 KRVLDVGCGSGILAIAAAKLGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSEDLVE--GKFDLVVANILADVL-- 238 (295)
T ss_dssp SEEEEES-TTSHHHHHHHHTTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSCTCC--S-EEEEEEES-HHHH--
T ss_pred CEEEEeCCcHHHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEeccccc--ccCCEEEECCCHHHH--
Confidence 4999999999954 44443 3346555544442223333344444422110 01122222 789999886444322
Q ss_pred CCCCCCCCcccccceeecccccCCcEEEEeCCH-HHHHHHHHHHhcCCceeEEecCCCCCCCCceEEEEEec
Q 009719 451 PGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP-EVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 451 ~~~~~~rC~~~~illEmDRILRP~G~~iird~~-~~~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
..++=++.+.|+|||++|++.-. +..+.|.+.++. -|++.....+ +.=--|+++|+
T Consensus 239 ----------~~l~~~~~~~l~~~G~lIlSGIl~~~~~~v~~a~~~-g~~~~~~~~~----~~W~~l~~~Kk 295 (295)
T PF06325_consen 239 ----------LELAPDIASLLKPGGYLILSGILEEQEDEVIEAYKQ-GFELVEEREE----GEWVALVFKKK 295 (295)
T ss_dssp ----------HHHHHHCHHHEEEEEEEEEEEEEGGGHHHHHHHHHT-TEEEEEEEEE----TTEEEEEEEE-
T ss_pred ----------HHHHHHHHHhhCCCCEEEEccccHHHHHHHHHHHHC-CCEEEEEEEE----CCEEEEEEEeC
Confidence 34566789999999999999732 234566666666 7776544322 22346667765
|
Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A .... |
| >TIGR03704 PrmC_rel_meth putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.0065 Score=61.15 Aligned_cols=152 Identities=14% Similarity=0.080 Sum_probs=83.6
Q ss_pred hhhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhh----ccccccc
Q 009719 349 ADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD----RGLIGVY 422 (527)
Q Consensus 349 ~d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e----RGLiG~~ 422 (527)
.+|+..-+.+....+ + ...-.+|+|+|||.|.++-+|... +-. +|+-+|.. ..+..+-+ .|+--+-
T Consensus 68 ~~Te~Lv~~~l~~~~---~---~~~~~~vLDlg~GsG~i~l~la~~~~~~--~v~~vDis~~al~~A~~N~~~~~~~~~~ 139 (251)
T TIGR03704 68 RRTEFLVDEAAALAR---P---RSGTLVVVDLCCGSGAVGAALAAALDGI--ELHAADIDPAAVRCARRNLADAGGTVHE 139 (251)
T ss_pred ccHHHHHHHHHHhhc---c---cCCCCEEEEecCchHHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCEEEE
Confidence 466666555543221 1 112237999999999998877532 211 12223322 33332221 1321122
Q ss_pred cccCCCCCC-CCCccchhhhcCcccccc-----CCCC--CCCCCc----------ccccceeecccccCCcEEEEeCCHH
Q 009719 423 HDWCEPFST-YPRTYDLIHVSGIESLIK-----NPGS--NKNSCS----------LVDLMVEMDRMLRPEGTVVVRDSPE 484 (527)
Q Consensus 423 hdwce~fst-YPrtyDLiHa~~~fs~~~-----~~~~--~~~rC~----------~~~illEmDRILRP~G~~iird~~~ 484 (527)
.|+.+.++. ....||+|=++--+.... .|.. ...+.. +..++-...++|+|||.+++--..+
T Consensus 140 ~D~~~~l~~~~~~~fDlVv~NPPy~~~~~~~~~~~e~~~~ep~~al~gg~dgl~~~~~i~~~a~~~L~~gG~l~l~~~~~ 219 (251)
T TIGR03704 140 GDLYDALPTALRGRVDILAANAPYVPTDAIALMPPEARDHEPRVALDGGADGLDVLRRVAAGAPDWLAPGGHLLVETSER 219 (251)
T ss_pred eechhhcchhcCCCEeEEEECCCCCCchhhhcCCHHHHhCCCHHHhcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECcc
Confidence 344443321 234688887664333110 0000 000111 2367777889999999999876666
Q ss_pred HHHHHHHHHhcCCceeEEecCCCC
Q 009719 485 VIDKVSRIANTVRWTAAVHDKEPG 508 (527)
Q Consensus 485 ~~~~i~~i~~~l~W~~~~~~~e~~ 508 (527)
-..++..++++..|+..+..|++.
T Consensus 220 ~~~~v~~~l~~~g~~~~~~~~~~~ 243 (251)
T TIGR03704 220 QAPLAVEAFARAGLIARVASSEEL 243 (251)
T ss_pred hHHHHHHHHHHCCCCceeeEcccc
Confidence 677888888888898888877765
|
This protein family is closely related to two different families of protein-(glutamine-N5) methyltransferase. The first is PrmB, which modifies ribosomal protein L3 in some bacteria. The second is PrmC (HemK), which modifies peptide chain release factors 1 and 2 in most bacteria and also in eukaryotes. The glutamine side chain-binding motif NPPY shared by PrmB and PrmC is N[VAT]PY in this family. The protein substrate is unknown. |
| >TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.0054 Score=61.93 Aligned_cols=78 Identities=18% Similarity=0.232 Sum_probs=52.8
Q ss_pred CcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEe----cC--cccc-------ccc--------ChHHH
Q 009719 163 RDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHC----SR--CLIP-------FTA--------YNATY 216 (527)
Q Consensus 163 ~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~c----s~--~l~h-------w~d--------~~~~a 216 (527)
.|.++.+++.++++ |+. +.+...|+..++...++||.|++ +. ++.+ |.. ....+
T Consensus 102 ~D~~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~i 181 (264)
T TIGR00446 102 NEFSKSRTKVLIANINRCGVLNVAVTNFDGRVFGAAVPKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKEL 181 (264)
T ss_pred EcCCHHHHHHHHHHHHHcCCCcEEEecCCHHHhhhhccCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHH
Confidence 37777887777543 543 45666788777777778999985 31 1111 111 12248
Q ss_pred HHHHhhcccCCcEEEEecCCCCCC
Q 009719 217 LIEVDRLLRPGGYLVISGPPVQWP 240 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~pp~~~~ 240 (527)
|.++.+.|||||++++|+-..+..
T Consensus 182 L~~a~~~lkpgG~lvYstcs~~~~ 205 (264)
T TIGR00446 182 IDSAFDALKPGGVLVYSTCSLEPE 205 (264)
T ss_pred HHHHHHhcCCCCEEEEEeCCCChH
Confidence 999999999999999998755543
|
|
| >PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.0026 Score=62.18 Aligned_cols=87 Identities=18% Similarity=0.175 Sum_probs=48.4
Q ss_pred eeEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhh----hccccccccccCCCCCCCC--CccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIY----DRGLIGVYHDWCEPFSTYP--RTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~----eRGLiG~~hdwce~fstYP--rtyDLiHa~~ 443 (527)
..|+|+|||+|.+++.|... .|..+-+.|. -+.++- .-|+-.+---....+..++ ..||+|++..
T Consensus 78 ~~VLdIG~GsG~~t~~la~~~~~~~~V~~vE~~~~----~~~~a~~~l~~~g~~~v~~~~gd~~~~~~~~~~fD~I~~~~ 153 (212)
T PRK13942 78 MKVLEIGTGSGYHAAVVAEIVGKSGKVVTIERIPE----LAEKAKKTLKKLGYDNVEVIVGDGTLGYEENAPYDRIYVTA 153 (212)
T ss_pred CEEEEECCcccHHHHHHHHhcCCCCEEEEEeCCHH----HHHHHHHHHHHcCCCCeEEEECCcccCCCcCCCcCEEEECC
Confidence 58999999999999776432 3444433322 122111 1232111111122233333 6899998864
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
.+. .+.-++-+.|+|||.+++-
T Consensus 154 ~~~---------------~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 154 AGP---------------DIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred Ccc---------------cchHHHHHhhCCCcEEEEE
Confidence 332 2333556689999999884
|
|
| >PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.0024 Score=67.32 Aligned_cols=130 Identities=18% Similarity=0.167 Sum_probs=71.7
Q ss_pred eEeecCCCccchhhhccCC-C-eeEEEecCCCCC-Cchh----HhhhccccccccccCCCCCCCCCccchhhhcCccccc
Q 009719 376 NIMDMNAFFGGFAAALTSD-P-VWVMNVVPARKS-STLS----VIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIESLI 448 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~-~-VwvMnvvp~~~~-ntl~----vi~eRGLiG~~hdwce~fstYPrtyDLiHa~~~fs~~ 448 (527)
.|+|+|||.|.++++|.+. | .-|.- .|.. .-|. -+-+.|+-+..+ +...++..+..||+|-++-.|-..
T Consensus 199 ~VLDlGCG~G~ls~~la~~~p~~~v~~---vDis~~Al~~A~~nl~~n~l~~~~~-~~D~~~~~~~~fDlIvsNPPFH~g 274 (342)
T PRK09489 199 KVLDVGCGAGVLSAVLARHSPKIRLTL---SDVSAAALESSRATLAANGLEGEVF-ASNVFSDIKGRFDMIISNPPFHDG 274 (342)
T ss_pred eEEEeccCcCHHHHHHHHhCCCCEEEE---EECCHHHHHHHHHHHHHcCCCCEEE-EcccccccCCCccEEEECCCccCC
Confidence 5999999999999988664 3 22221 2211 1111 111233333222 233344346889999998766421
Q ss_pred cCCCCCCCCCcccccceeecccccCCcEEEEeCC--HHHHHHHHHHHhcCCceeEEecCCCCCCCCceEEEEEec
Q 009719 449 KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS--PEVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 449 ~~~~~~~~rC~~~~illEmDRILRP~G~~iird~--~~~~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
. ..+.-..+.++-++-|.|+|||.++|-.+ ..+-..+++..... ++... .++=||+-|+|.
T Consensus 275 ~----~~~~~~~~~~i~~a~~~LkpgG~L~iVan~~l~y~~~l~~~Fg~~--~~la~------~~~f~v~~a~~~ 337 (342)
T PRK09489 275 I----QTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDLLDETFGSH--EVLAQ------TGRFKVYRAIMT 337 (342)
T ss_pred c----cccHHHHHHHHHHHHHhcCcCCEEEEEEeCCCChHHHHHHHcCCe--EEEEe------CCCEEEEEEEcc
Confidence 1 11112346788999999999999987543 22333444444432 22221 124577777764
|
|
| >cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy) | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.0033 Score=50.15 Aligned_cols=95 Identities=24% Similarity=0.270 Sum_probs=54.5
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhh---hccc---cccc-cccCCCCCCCCCccchhhhcCcccc
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIY---DRGL---IGVY-HDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~---eRGL---iG~~-hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
+++|+|||.|+++..+...+.. ++.-.+.. +.+..+- +.+. +-.+ .|+.+.-..-+..||++.+...+..
T Consensus 1 ~ildig~G~G~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~ 78 (107)
T cd02440 1 RVLDLGCGTGALALALASGPGA--RVTGVDISPVALELARKAAAALLADNVEVLKGDAEELPPEADESFDVIISDPPLHH 78 (107)
T ss_pred CeEEEcCCccHHHHHHhcCCCC--EEEEEeCCHHHHHHHHHHHhcccccceEEEEcChhhhccccCCceEEEEEccceee
Confidence 4899999999999888763221 22222222 2112111 1111 1111 1222211113478999999888764
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
+. =....++-.+.+.|||||++++.
T Consensus 79 ~~--------~~~~~~l~~~~~~l~~~g~~~~~ 103 (107)
T cd02440 79 LV--------EDLARFLEEARRLLKPGGVLVLT 103 (107)
T ss_pred hh--------hHHHHHHHHHHHHcCCCCEEEEE
Confidence 11 02356788889999999999986
|
There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.). |
| >TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.0061 Score=59.28 Aligned_cols=90 Identities=18% Similarity=0.207 Sum_probs=50.1
Q ss_pred eeEeecCCCccchhhhccCC--C---eeEEEecCCCCCCchhHhhhccc--c-ccccccCCCCCCCCCccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSD--P---VWVMNVVPARKSSTLSVIYDRGL--I-GVYHDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~---VwvMnvvp~~~~ntl~vi~eRGL--i-G~~hdwce~fstYPrtyDLiHa~~~fs 446 (527)
..|||+|||.|.+++.|.+. + |+.+-.-|.-....-..+-+.|+ + =+..|..+.+.. ...||+|+++....
T Consensus 79 ~~VLDiG~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~~~-~~~fD~Ii~~~~~~ 157 (215)
T TIGR00080 79 MKVLEIGTGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWEP-LAPYDRIYVTAAGP 157 (215)
T ss_pred CEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCCcc-cCCCCEEEEcCCcc
Confidence 47999999999999988543 2 44433322211111111223343 1 122233333222 25799998764332
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
.+.-++-+.|+|||.+|+-
T Consensus 158 ---------------~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 158 ---------------KIPEALIDQLKEGGILVMP 176 (215)
T ss_pred ---------------cccHHHHHhcCcCcEEEEE
Confidence 2333466889999999884
|
Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. |
| >PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.0035 Score=60.20 Aligned_cols=93 Identities=20% Similarity=0.272 Sum_probs=54.4
Q ss_pred eeEeecCCCccchhhhccC-----CCeeEEEecCCCCCCchhHhhhc----cc---cccc-cccCCCCCCCCCccchhhh
Q 009719 375 RNIMDMNAFFGGFAAALTS-----DPVWVMNVVPARKSSTLSVIYDR----GL---IGVY-HDWCEPFSTYPRTYDLIHV 441 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~-----~~VwvMnvvp~~~~ntl~vi~eR----GL---iG~~-hdwce~fstYPrtyDLiHa 441 (527)
..|+|+|||.|.++..+.. ..|..+-+.+ +.+..+-++ ++ +-+. .|..+ ++.=+.+||+|.+
T Consensus 53 ~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~s~----~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~I~~ 127 (239)
T PRK00216 53 DKVLDLACGTGDLAIALAKAVGKTGEVVGLDFSE----GMLAVGREKLRDLGLSGNVEFVQGDAEA-LPFPDNSFDAVTI 127 (239)
T ss_pred CeEEEeCCCCCHHHHHHHHHcCCCCeEEEEeCCH----HHHHHHHHhhcccccccCeEEEeccccc-CCCCCCCccEEEE
Confidence 4699999999999877643 2333332221 222222221 11 1111 12111 1211368999998
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+.++-. ..+...+|-++-++|+|||.+++-+
T Consensus 128 ~~~l~~---------~~~~~~~l~~~~~~L~~gG~li~~~ 158 (239)
T PRK00216 128 AFGLRN---------VPDIDKALREMYRVLKPGGRLVILE 158 (239)
T ss_pred eccccc---------CCCHHHHHHHHHHhccCCcEEEEEE
Confidence 766543 2345778899999999999998854
|
|
| >PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.023 Score=54.89 Aligned_cols=65 Identities=18% Similarity=0.027 Sum_probs=44.7
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++.+++.|+++ ++. +.+..+|......+.+.||+|++..+..+ ...++.+.|+|||.+++...
T Consensus 107 d~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~~~~~~~~-------~~~~l~~~L~~gG~lv~~~~ 176 (212)
T PRK00312 107 ERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGWPAYAPFDRILVTAAAPE-------IPRALLEQLKEGGILVAPVG 176 (212)
T ss_pred eCCHHHHHHHHHHHHHCCCCceEEEECCcccCCCcCCCcCEEEEccCchh-------hhHHHHHhcCCCcEEEEEEc
Confidence 5667888877654 343 45566665332223589999999876543 34567899999999998764
|
|
| >PRK06922 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.0024 Score=72.46 Aligned_cols=105 Identities=18% Similarity=0.209 Sum_probs=58.2
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhc----cc-cccccccCCCCCC-C-CCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDR----GL-IGVYHDWCEPFST-Y-PRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eR----GL-iG~~hdwce~fst-Y-PrtyDLiHa~~~f 445 (527)
.+|+|+|||.|.++.+|... |- .+|+-.|-. +.+..+-++ |. +-+.+.=+..++. + |.+||+|.++.++
T Consensus 420 ~rVLDIGCGTG~ls~~LA~~~P~--~kVtGIDIS~~MLe~Ararl~~~g~~ie~I~gDa~dLp~~fedeSFDvVVsn~vL 497 (677)
T PRK06922 420 DTIVDVGAGGGVMLDMIEEETED--KRIYGIDISENVIDTLKKKKQNEGRSWNVIKGDAINLSSSFEKESVDTIVYSSIL 497 (677)
T ss_pred CEEEEeCCCCCHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHhhhcCCCeEEEEcchHhCccccCCCCEEEEEEchHH
Confidence 48999999999998777432 11 122223322 333333222 21 1111111222332 3 4899999887655
Q ss_pred ccccC--CCCCC--CCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKN--PGSNK--NSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~--~~~~~--~rC~~~~illEmDRILRP~G~~iird 481 (527)
-.+-+ |..+. +.-.+..+|-|+-|+|+|||.++|.|
T Consensus 498 H~L~syIp~~g~~f~~edl~kiLreI~RVLKPGGrLII~D 537 (677)
T PRK06922 498 HELFSYIEYEGKKFNHEVIKKGLQSAYEVLKPGGRIIIRD 537 (677)
T ss_pred HhhhhhcccccccccHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 43210 00000 11245678999999999999999987
|
|
| >TIGR02716 C20_methyl_CrtF C-20 methyltransferase BchU | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.0027 Score=64.85 Aligned_cols=100 Identities=13% Similarity=0.228 Sum_probs=61.3
Q ss_pred cCCCCeeeEeecCCCccchhhhccCC-C---eeEEEecCCCCCCchhH----hhhccccccccccCCCCC--CCCCccch
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSD-P---VWVMNVVPARKSSTLSV----IYDRGLIGVYHDWCEPFS--TYPRTYDL 438 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~-~---VwvMnvvp~~~~ntl~v----i~eRGLiG~~hdwce~fs--tYPrtyDL 438 (527)
+.....+.|+|+|||.|.++.++.++ | +.+. |-+..+.. +-+.|+-+-++-.+..|- .+| .+|+
T Consensus 145 ~~~~~~~~vlDiG~G~G~~~~~~~~~~p~~~~~~~-----D~~~~~~~a~~~~~~~gl~~rv~~~~~d~~~~~~~-~~D~ 218 (306)
T TIGR02716 145 AKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTIL-----NLPGAIDLVNENAAEKGVADRMRGIAVDIYKESYP-EADA 218 (306)
T ss_pred cCCCCCCEEEEeCCchhHHHHHHHHHCCCCEEEEE-----ecHHHHHHHHHHHHhCCccceEEEEecCccCCCCC-CCCE
Confidence 34456789999999999999888544 3 3333 22333333 344465332222222221 345 3798
Q ss_pred hhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 439 IHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 439 iHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+-.++++-.|. + -....+|-++-|.|+|||.++|-|
T Consensus 219 v~~~~~lh~~~------~-~~~~~il~~~~~~L~pgG~l~i~d 254 (306)
T TIGR02716 219 VLFCRILYSAN------E-QLSTIMCKKAFDAMRSGGRLLILD 254 (306)
T ss_pred EEeEhhhhcCC------h-HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 76666665553 1 122458889999999999998875
|
Members of this protein family are the S-adenosylmethionine-depenedent C-20 methyltransferase BchU, part of the pathway of bacteriochlorophyll c production in photosynthetic green sulfur bacteria. The position modified by this enzyme represents the difference between bacteriochlorophylls c and d; strains lacking this protein can only produced bacteriochlorophyll d. |
| >PRK14121 tRNA (guanine-N(7)-)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.011 Score=63.59 Aligned_cols=121 Identities=15% Similarity=0.086 Sum_probs=69.0
Q ss_pred eeEeecCCCccchhhhccCC----CeeEEEecCCCCCCchhHhhhcccc---ccccccCCCCCCCC-CccchhhhcCcc-
Q 009719 375 RNIMDMNAFFGGFAAALTSD----PVWVMNVVPARKSSTLSVIYDRGLI---GVYHDWCEPFSTYP-RTYDLIHVSGIE- 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~----~VwvMnvvp~~~~ntl~vi~eRGLi---G~~hdwce~fstYP-rtyDLiHa~~~f- 445 (527)
..++|+|||.|.|+.+|... .+.-+=+-+......+.-+-++||- -+..|--+-+..+| .++|.|+.. |
T Consensus 124 p~vLEIGcGsG~~ll~lA~~~P~~~~iGIEI~~~~i~~a~~ka~~~gL~NV~~i~~DA~~ll~~~~~~s~D~I~ln--FP 201 (390)
T PRK14121 124 KILIEIGFGSGRHLLYQAKNNPNKLFIGIEIHTPSIEQVLKQIELLNLKNLLIINYDARLLLELLPSNSVEKIFVH--FP 201 (390)
T ss_pred CeEEEEcCcccHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHhhhhCCCCceeEEEEe--CC
Confidence 47999999999999998643 2222222211111223344555651 12223222122234 799999875 3
Q ss_pred ccccCCCCCCC-CCcccccceeecccccCCcEEEEe-CCHHHHHHHHHHHhcC-Ccee
Q 009719 446 SLIKNPGSNKN-SCSLVDLMVEMDRMLRPEGTVVVR-DSPEVIDKVSRIANTV-RWTA 500 (527)
Q Consensus 446 s~~~~~~~~~~-rC~~~~illEmDRILRP~G~~iir-d~~~~~~~i~~i~~~l-~W~~ 500 (527)
..|. ...+ |=-...+|-|+=|+|+|||.+.++ |..++.+.+.+.+... +++.
T Consensus 202 dPW~---KkrHRRlv~~~fL~e~~RvLkpGG~l~l~TD~~~y~~~~~e~~~~~~~~~~ 256 (390)
T PRK14121 202 VPWD---KKPHRRVISEDFLNEALRVLKPGGTLELRTDSELYFEFSLELFLKLPKAKI 256 (390)
T ss_pred CCcc---ccchhhccHHHHHHHHHHHcCCCcEEEEEEECHHHHHHHHHHHHhCCCcee
Confidence 3452 1112 222368899999999999999887 5556655555554333 4544
|
|
| >PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.0023 Score=62.67 Aligned_cols=96 Identities=19% Similarity=0.199 Sum_probs=63.5
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCCC-C-chhHhhhcccc--ccccccCCCCCCCCCccchhhhcCccccccCC
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-S-TLSVIYDRGLI--GVYHDWCEPFSTYPRTYDLIHVSGIESLIKNP 451 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-n-tl~vi~eRGLi--G~~hdwce~fstYPrtyDLiHa~~~fs~~~~~ 451 (527)
.|||+|||-|--|-+|.++..=|..|=-.... + ...++-++||- ....|.- .++ +|..||+|-+..+|-..
T Consensus 33 ~~LDlgcG~GRNalyLA~~G~~VtAvD~s~~al~~l~~~a~~~~l~i~~~~~Dl~-~~~-~~~~yD~I~st~v~~fL--- 107 (192)
T PF03848_consen 33 KALDLGCGEGRNALYLASQGFDVTAVDISPVALEKLQRLAEEEGLDIRTRVADLN-DFD-FPEEYDFIVSTVVFMFL--- 107 (192)
T ss_dssp EEEEES-TTSHHHHHHHHTT-EEEEEESSHHHHHHHHHHHHHTT-TEEEEE-BGC-CBS--TTTEEEEEEESSGGGS---
T ss_pred cEEEcCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHHHhhcCceeEEEEecch-hcc-ccCCcCEEEEEEEeccC---
Confidence 79999999999999998888766555433322 3 33445567773 2223322 222 57899999987777654
Q ss_pred CCCCCCCcccccceeecccccCCcEEEEe
Q 009719 452 GSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 452 ~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
++=.+..|+-.|-.-++||||+++-
T Consensus 108 ----~~~~~~~i~~~m~~~~~pGG~~li~ 132 (192)
T PF03848_consen 108 ----QRELRPQIIENMKAATKPGGYNLIV 132 (192)
T ss_dssp -----GGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred ----CHHHHHHHHHHHHhhcCCcEEEEEE
Confidence 3445677888899999999999883
|
When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A. |
| >PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.0025 Score=58.18 Aligned_cols=97 Identities=16% Similarity=0.291 Sum_probs=61.3
Q ss_pred eeEeecCCCccchhhhccC---CCeeEEEecCCCCCCchhHhhh----cccc--c-cccccCCCCCC-CCCccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTS---DPVWVMNVVPARKSSTLSVIYD----RGLI--G-VYHDWCEPFST-YPRTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~---~~VwvMnvvp~~~~ntl~vi~e----RGLi--G-~~hdwce~fst-YPrtyDLiHa~~ 443 (527)
-+|||+|||+|-++=.|.+ .+.=++.|=-.. .-+..+-+ .|+- = ...|.-+ ++. |+..||+|.+..
T Consensus 5 ~~iLDlGcG~G~~~~~l~~~~~~~~~i~gvD~s~--~~i~~a~~~~~~~~~~ni~~~~~d~~~-l~~~~~~~~D~I~~~~ 81 (152)
T PF13847_consen 5 KKILDLGCGTGRLLIQLAKELNPGAKIIGVDISE--EMIEYAKKRAKELGLDNIEFIQGDIED-LPQELEEKFDIIISNG 81 (152)
T ss_dssp SEEEEET-TTSHHHHHHHHHSTTTSEEEEEESSH--HHHHHHHHHHHHTTSTTEEEEESBTTC-GCGCSSTTEEEEEEES
T ss_pred CEEEEecCcCcHHHHHHHHhcCCCCEEEEEECcH--HHHHHhhcccccccccccceEEeehhc-cccccCCCeeEEEEcC
Confidence 4799999999999888872 234444443222 33333333 3442 1 1123322 221 458899999998
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP 483 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~ 483 (527)
.+... .+...+|-+|=|.|+|+|.+++.+-.
T Consensus 82 ~l~~~---------~~~~~~l~~~~~~lk~~G~~i~~~~~ 112 (152)
T PF13847_consen 82 VLHHF---------PDPEKVLKNIIRLLKPGGILIISDPN 112 (152)
T ss_dssp TGGGT---------SHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred chhhc---------cCHHHHHHHHHHHcCCCcEEEEEECC
Confidence 88432 34467888999999999999999754
|
... |
| >COG4976 Predicted methyltransferase (contains TPR repeat) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.0062 Score=61.63 Aligned_cols=141 Identities=16% Similarity=0.192 Sum_probs=93.0
Q ss_pred cCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccccc-cccccCCCCC--CCCCccchhhhcCc
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGLIG-VYHDWCEPFS--TYPRTYDLIHVSGI 444 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGLiG-~~hdwce~fs--tYPrtyDLiHa~~~ 444 (527)
.+.+.+|.++|.|||+|-++-+|.+.-= -+-=+|-+ |-|..+.|+|+-- .||-=-..|. +=++-+|||-+..+
T Consensus 121 ~~~g~F~~~lDLGCGTGL~G~~lR~~a~---~ltGvDiS~nMl~kA~eKg~YD~L~~Aea~~Fl~~~~~er~DLi~AaDV 197 (287)
T COG4976 121 ADLGPFRRMLDLGCGTGLTGEALRDMAD---RLTGVDISENMLAKAHEKGLYDTLYVAEAVLFLEDLTQERFDLIVAADV 197 (287)
T ss_pred ccCCccceeeecccCcCcccHhHHHHHh---hccCCchhHHHHHHHHhccchHHHHHHHHHHHhhhccCCcccchhhhhH
Confidence 4556799999999999999999965421 11122334 8899999999831 1111111244 45788999999999
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-------------HH---HHHHHHHHHhcCCceeEEe-----
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-------------PE---VIDKVSRIANTVRWTAAVH----- 503 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-------------~~---~~~~i~~i~~~l~W~~~~~----- 503 (527)
|+-.- .++.++.=.++.|.|||.++++-+ .. --..|.....+---++..+
T Consensus 198 l~YlG---------~Le~~~~~aa~~L~~gGlfaFSvE~l~~~~~f~l~ps~RyAH~~~YVr~~l~~~Gl~~i~~~~tti 268 (287)
T COG4976 198 LPYLG---------ALEGLFAGAAGLLAPGGLFAFSVETLPDDGGFVLGPSQRYAHSESYVRALLAASGLEVIAIEDTTI 268 (287)
T ss_pred HHhhc---------chhhHHHHHHHhcCCCceEEEEecccCCCCCeecchhhhhccchHHHHHHHHhcCceEEEeecccc
Confidence 98542 468899999999999999999831 00 1234566655555555433
Q ss_pred cCCCCCCCCceEEEEEec
Q 009719 504 DKEPGSNGREKILVATKS 521 (527)
Q Consensus 504 ~~e~~~~~~ekiLi~~K~ 521 (527)
-.+.+.-.+..+.|++|+
T Consensus 269 R~d~g~pv~G~L~iark~ 286 (287)
T COG4976 269 RRDAGEPVPGILVIARKK 286 (287)
T ss_pred hhhcCCCCCCceEEEecC
Confidence 123344445567777775
|
|
| >PF01739 CheR: CheR methyltransferase, SAM binding domain; InterPro: IPR022642 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.011 Score=57.82 Aligned_cols=53 Identities=28% Similarity=0.451 Sum_probs=34.4
Q ss_pred eeccccCCCCCCCcccEEEecCcccccccChH-HHHHHHhhcccCCcEEEEecC
Q 009719 183 AMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA-TYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 183 ~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~-~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+.+....+-+.+.||+|.|.-+++++....+ .++.-+++.|+|||+|++...
T Consensus 123 ~~~NL~~~~~~~~~fD~I~CRNVlIYF~~~~~~~vl~~l~~~L~pgG~L~lG~s 176 (196)
T PF01739_consen 123 RRHNLLDPDPPFGRFDLIFCRNVLIYFDPETQQRVLRRLHRSLKPGGYLFLGHS 176 (196)
T ss_dssp EE--TT-S------EEEEEE-SSGGGS-HHHHHHHHHHHGGGEEEEEEEEE-TT
T ss_pred EecccCCCCcccCCccEEEecCEEEEeCHHHHHHHHHHHHHHcCCCCEEEEecC
Confidence 33443333445789999999999999977653 599999999999999999765
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. Flagellated bacteria swim towards favourable chemicals and away from deleterious ones. Sensing of chemoeffector gradients involves chemotaxis receptors, transmembrane (TM) proteins that detect stimuli through their periplasmic domains and transduce the signals via their cytoplasmic domains []. Signalling outputs from these receptors are influenced both by the binding of the chemoeffector ligand to their periplasmic domains and by methylation of specific glutamate residues on their cytoplasmic domains. Methylation is catalysed by CheR, an S-adenosylmethionine-dependent methyltransferase [], which reversibly methylates specific glutamate residues within a coiled coil region, to form gamma-glutamyl methyl ester residues [, ]. The structure of the Salmonella typhimurium chemotaxis receptor methyltransferase CheR, bound to S-adenosylhomocysteine, has been determined to a resolution of 2.0 A []. The structure reveals CheR to be a two-domain protein, with a smaller N-terminal helical domain linked via a single polypeptide connection to a larger C-terminal alpha/beta domain. The C-terminal domain has the characteristics of a nucleotide-binding fold, with an insertion of a small anti-parallel beta-sheet subdomain. The S-adenosylhomocysteine-binding site is formed mainly by the large domain, with contributions from residues within the N-terminal domain and the linker region []. CheR proteins are part of the chemotaxis signaling mechanism which methylates the chemotaxis receptor at specific glutamate residues. This entry refers to the C-terminal SAM-binding domain of the CherR-type MCP methyltransferases, which are found in bacteria, archaea and green plants. This entry is found in association with PF03705 from PFAM. ; PDB: 1AF7_A 1BC5_A. |
| >PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.067 Score=50.33 Aligned_cols=100 Identities=16% Similarity=0.196 Sum_probs=57.8
Q ss_pred CcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccC-----hHHHHHHHhhcccCCcEEEE
Q 009719 163 RDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY-----NATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 163 ~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~-----~~~aL~Ei~RVLRPGG~lvi 232 (527)
.|.++..++.|++. ++. +.+...|... +++++.||+|+|.-=+ |.... ...++.+..+.|||||.|++
T Consensus 61 vDi~~~a~~~a~~n~~~n~~~~v~~~~~d~~~-~~~~~~fD~Iv~NPP~-~~~~~~~~~~~~~~i~~a~~~Lk~~G~l~l 138 (170)
T PF05175_consen 61 VDINPDALELAKRNAERNGLENVEVVQSDLFE-ALPDGKFDLIVSNPPF-HAGGDDGLDLLRDFIEQARRYLKPGGRLFL 138 (170)
T ss_dssp EESBHHHHHHHHHHHHHTTCTTEEEEESSTTT-TCCTTCEEEEEE---S-BTTSHCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EcCCHHHHHHHHHHHHhcCccccccccccccc-cccccceeEEEEccch-hcccccchhhHHHHHHHHHHhccCCCEEEE
Confidence 37777888877653 455 5555555421 3348999999997432 22221 13489999999999999977
Q ss_pred ecCCCCCCCchhHHHHHHHHHHhcceEEeeeecceEEEe
Q 009719 233 SGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWK 271 (527)
Q Consensus 233 S~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~~~~v~iwr 271 (527)
...... .... .++++.. -=+.+.+.....|+|
T Consensus 139 v~~~~~---~~~~--~l~~~f~--~~~~~~~~~~~~v~~ 170 (170)
T PF05175_consen 139 VINSHL---GYER--LLKELFG--DVEVVAKNKGFRVLR 170 (170)
T ss_dssp EEETTS---CHHH--HHHHHHS----EEEEEESSEEEEE
T ss_pred EeecCC---ChHH--HHHHhcC--CEEEEEECCCEEEeC
Confidence 554211 1111 1333333 135566667777776
|
; GO: 0008168 methyltransferase activity; PDB: 1WY7_A 1DUS_A 2OZV_A 2PJD_A 1VQ1_A 1NV9_A 1SG9_C 1NV8_A 3Q87_B 3DMF_A .... |
| >TIGR00536 hemK_fam HemK family putative methylases | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.02 Score=58.32 Aligned_cols=141 Identities=18% Similarity=0.256 Sum_probs=78.1
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhc----cc---c-ccccccCCCCCCCCCccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDR----GL---I-GVYHDWCEPFSTYPRTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eR----GL---i-G~~hdwce~fstYPrtyDLiHa~~~ 444 (527)
..|+|+|||.|.++.+|... +-+ +|.-+|.. ..+.++-+. |+ + =+..||.+++. ...||+|=++--
T Consensus 116 ~~vLDlG~GsG~i~l~la~~~~~~--~v~avDis~~al~~a~~n~~~~~~~~~v~~~~~d~~~~~~--~~~fDlIvsNPP 191 (284)
T TIGR00536 116 LHILDLGTGSGCIALALAYEFPNA--EVIAVDISPDALAVAEENAEKNQLEHRVEFIQSNLFEPLA--GQKIDIIVSNPP 191 (284)
T ss_pred CEEEEEeccHhHHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhccCc--CCCccEEEECCC
Confidence 47999999999999888653 211 22333332 344433332 33 1 12357776552 237998876522
Q ss_pred cccccC-----------C----CCCCCCC-cccccceeecccccCCcEEEEeCCHHHHHHHHHHHh-cCCceeEEecCCC
Q 009719 445 ESLIKN-----------P----GSNKNSC-SLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIAN-TVRWTAAVHDKEP 507 (527)
Q Consensus 445 fs~~~~-----------~----~~~~~rC-~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~-~l~W~~~~~~~e~ 507 (527)
+..-.+ | ..+.++- .+..++-+.-+.|+|||++++--..+.-..++++.. ...|..... ..|
T Consensus 192 yi~~~~~~~~~~~~~~eP~~AL~gg~dgl~~~~~ii~~a~~~L~~gG~l~~e~g~~q~~~~~~~~~~~~~~~~~~~-~~D 270 (284)
T TIGR00536 192 YIDEEDLADLPNVVRFEPLLALVGGDDGLNILRQIIELAPDYLKPNGFLVCEIGNWQQKSLKELLRIKFTWYDVEN-GRD 270 (284)
T ss_pred CCCcchhhcCCcccccCcHHHhcCCCcHHHHHHHHHHHHHHhccCCCEEEEEECccHHHHHHHHHHhcCCCceeEE-ecC
Confidence 111000 0 0000000 133577778899999999999765555556777665 456643222 222
Q ss_pred CCCCCceEEEEEec
Q 009719 508 GSNGREKILVATKS 521 (527)
Q Consensus 508 ~~~~~ekiLi~~K~ 521 (527)
-.+.++++++++.
T Consensus 271 -~~g~~R~~~~~~~ 283 (284)
T TIGR00536 271 -LNGKERVVLGFYH 283 (284)
T ss_pred -CCCCceEEEEEec
Confidence 3356889988753
|
The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. Both E. coli and H. influenzae have two members rather than one. The members from the Mycoplasmas have an additional C-terminal domain. |
| >PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.0083 Score=58.18 Aligned_cols=90 Identities=23% Similarity=0.263 Sum_probs=51.1
Q ss_pred eeEeecCCCccchhhhccC-----CCeeEEEecCCCCCCchhHhhhccccc---cc-cccCCCCCCCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTS-----DPVWVMNVVPARKSSTLSVIYDRGLIG---VY-HDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~-----~~VwvMnvvp~~~~ntl~vi~eRGLiG---~~-hdwce~fstYPrtyDLiHa~~~f 445 (527)
..|||+|||.|.+++.|.+ ..|..+-+.|.-....-+-+...|+-. +. .|-.+.++. ..+||.|.++..+
T Consensus 74 ~~VLDiG~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~~-~~~fD~Ii~~~~~ 152 (205)
T PRK13944 74 MKILEVGTGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLEK-HAPFDAIIVTAAA 152 (205)
T ss_pred CEEEEECcCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCcc-CCCccEEEEccCc
Confidence 4699999999999877643 234444443321110111223345422 22 233333322 3689999987544
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
... .=|+-|+|+|||.+++-
T Consensus 153 ~~~---------------~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 153 STI---------------PSALVRQLKDGGVLVIP 172 (205)
T ss_pred chh---------------hHHHHHhcCcCcEEEEE
Confidence 322 22566999999999885
|
|
| >PF01728 FtsJ: FtsJ-like methyltransferase; InterPro: IPR002877 RrmJ (FtsJ) is a well conserved heat shock protein present in prokaryotes, archaea, and eukaryotes | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.0097 Score=56.02 Aligned_cols=146 Identities=19% Similarity=0.255 Sum_probs=73.8
Q ss_pred cCCCCeeeEeecCCCccchhhhccCCC-----eeEEEecCCCCCCchhHhhhcccc---ccccccCCCCCCCCCccchhh
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSDP-----VWVMNVVPARKSSTLSVIYDRGLI---GVYHDWCEPFSTYPRTYDLIH 440 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~~-----VwvMnvvp~~~~ntl~vi~eRGLi---G~~hdwce~fstYPrtyDLiH 440 (527)
+..+.-.+|+|.||+-|||..++.++. |+-+-+.|.+...-+..+ +|=| .+...-.+.++.=.+.+|||-
T Consensus 19 ~~~~~~~~vlDlG~aPGGws~~~~~~~~~~~~v~avDl~~~~~~~~~~~i--~~d~~~~~~~~~i~~~~~~~~~~~dlv~ 96 (181)
T PF01728_consen 19 FKPGKGFTVLDLGAAPGGWSQVLLQRGGPAGRVVAVDLGPMDPLQNVSFI--QGDITNPENIKDIRKLLPESGEKFDLVL 96 (181)
T ss_dssp S-TTTTEEEEEET-TTSHHHHHHHTSTTTEEEEEEEESSSTGS-TTEEBT--TGGGEEEEHSHHGGGSHGTTTCSESEEE
T ss_pred CCcccccEEEEcCCcccceeeeeeecccccceEEEEeccccccccceeee--ecccchhhHHHhhhhhccccccCcceec
Confidence 455678999999999999999998776 334555555322212222 2211 111111222221126799999
Q ss_pred hcCccccccCCCCCCCCCccccccee---ecccccCCcEEEEe-----CCHHHHHHHHHHHhcCCceeEEecCCCCCCCC
Q 009719 441 VSGIESLIKNPGSNKNSCSLVDLMVE---MDRMLRPEGTVVVR-----DSPEVIDKVSRIANTVRWTAAVHDKEPGSNGR 512 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~~~illE---mDRILRP~G~~iir-----d~~~~~~~i~~i~~~l~W~~~~~~~e~~~~~~ 512 (527)
|+..+..-.++..+ .--.+..++-+ +-..|+|||.+|+. +..+++..++...+.+++-.- .-..+...
T Consensus 97 ~D~~~~~~g~~~~d-~~~~~~l~~~~l~~a~~~L~~gG~~v~K~~~~~~~~~~~~~l~~~F~~v~~~Kp---~~sr~~s~ 172 (181)
T PF01728_consen 97 SDMAPNVSGDRNID-EFISIRLILSQLLLALELLKPGGTFVIKVFKGPEIEELIYLLKRCFSKVKIVKP---PSSRSESS 172 (181)
T ss_dssp E-------SSHHSS-HHHHHHHHHHHHHHHHHHHCTTEEEEEEESSSTTSHHHHHHHHHHHHHEEEEE----TTSBTTCB
T ss_pred cccccCCCCchhhH-HHHHHHHHHHHHHHHHhhhcCCCEEEEEeccCccHHHHHHHHHhCCeEEEEEEC---cCCCCCcc
Confidence 98754321100000 00001112222 22559999988874 334677777777666554322 22355668
Q ss_pred ceEEEEEe
Q 009719 513 EKILVATK 520 (527)
Q Consensus 513 ekiLi~~K 520 (527)
|.-|||.+
T Consensus 173 E~Ylv~~~ 180 (181)
T PF01728_consen 173 EEYLVCRG 180 (181)
T ss_dssp EEEEESEE
T ss_pred EEEEEEcC
Confidence 89998874
|
RrmJ is responsible for methylating 23 S rRNA at position U2552 in the aminoacyl (A)1-site of the ribosome []. U2552 is one of the five universally conserved A-loop residues and has been shown to be methylated at the ribose 2'-OH group in the majority of organisms investigated so far. This suggests that this modification plays an important role in the A-loop function. RrmJ recognises its methylation target only when the 23 S rRNA is present in 50 S ribosomal subunits. This suggests that the RrmJ-mediated methylation must occur late in the maturation process of the ribosome. This is in contrast to other known 23 S rRNA modifications that occur in earlier maturation steps. The 1.5 A crystal structure of RrmJ in complex with its cofactor S-adenosylmethionine revealed that RrmJ has a methyltransferase fold. The active site of RrmJ appears to be formed by a catalytic triad consisting of two lysine residues and the negatively charged aspartate residue. Another highly conserved glutamate residue that is present in the active site of RrmJ appears to play only a minor role in the methyltransfer reaction in vivo []. ; GO: 0003676 nucleic acid binding, 0008168 methyltransferase activity, 0032259 methylation; PDB: 3GCZ_A 2PLW_A 2NYU_A 2OXT_C 3EMD_A 3ELY_A 3ELW_A 3ELU_A 3ELD_A 3EMB_A .... |
| >PRK14902 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.01 Score=64.23 Aligned_cols=77 Identities=22% Similarity=0.341 Sum_probs=49.9
Q ss_pred cCcChHHHHHHHHHc----CCC-cEEeeccccCCC--CCCCcccEEEecC------cccc-----cccC----------h
Q 009719 162 PRDSHKAQIQFALER----GIP-AFVAMLGTRRLP--FPAFSFDIVHCSR------CLIP-----FTAY----------N 213 (527)
Q Consensus 162 p~D~seaqvq~A~eR----g~p-a~~~v~dae~LP--FpD~SFDlV~cs~------~l~h-----w~d~----------~ 213 (527)
..|.++.+++.++++ |+. +.+..+|+..++ ++ ++||+|++.- .+.+ |... .
T Consensus 280 avDi~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~~~~~~-~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q 358 (444)
T PRK14902 280 ALDIHEHKLKLIEENAKRLGLTNIETKALDARKVHEKFA-EKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQ 358 (444)
T ss_pred EEeCCHHHHHHHHHHHHHcCCCeEEEEeCCcccccchhc-ccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHH
Confidence 337777787777643 544 456677876653 44 8899999641 1111 1111 1
Q ss_pred HHHHHHHhhcccCCcEEEEecCCCCC
Q 009719 214 ATYLIEVDRLLRPGGYLVISGPPVQW 239 (527)
Q Consensus 214 ~~aL~Ei~RVLRPGG~lviS~pp~~~ 239 (527)
..+|.++.|+|||||++++|+.....
T Consensus 359 ~~iL~~a~~~LkpGG~lvystcs~~~ 384 (444)
T PRK14902 359 LEILESVAQYLKKGGILVYSTCTIEK 384 (444)
T ss_pred HHHHHHHHHHcCCCCEEEEEcCCCCh
Confidence 23799999999999999998864443
|
|
| >PRK11805 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.013 Score=60.85 Aligned_cols=117 Identities=21% Similarity=0.225 Sum_probs=64.4
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhh----ccc---ccc-ccccCCCCCCCCCccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD----RGL---IGV-YHDWCEPFSTYPRTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e----RGL---iG~-~hdwce~fstYPrtyDLiHa~~~ 444 (527)
.+|+|+|||.|.++.+|... |-+ +|+-+|-. ..+.++-+ .|+ |-+ ..|+-+.++ +.+||+|-++--
T Consensus 135 ~~VLDlG~GsG~iai~la~~~p~~--~V~avDis~~al~~A~~n~~~~~l~~~i~~~~~D~~~~l~--~~~fDlIvsNPP 210 (307)
T PRK11805 135 TRILDLCTGSGCIAIACAYAFPDA--EVDAVDISPDALAVAEINIERHGLEDRVTLIESDLFAALP--GRRYDLIVSNPP 210 (307)
T ss_pred CEEEEEechhhHHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEECchhhhCC--CCCccEEEECCC
Confidence 57999999999999988643 322 23334432 44443322 344 222 234444332 368999988632
Q ss_pred ccccc-----------CCC----CCCCCCc-ccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcC
Q 009719 445 ESLIK-----------NPG----SNKNSCS-LVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTV 496 (527)
Q Consensus 445 fs~~~-----------~~~----~~~~rC~-~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l 496 (527)
+.... .|. .+.++.. ...++-+.-+.|+|||.+++.-..+ ..++.++....
T Consensus 211 yi~~~~~~~l~~~~~~eP~~AL~gg~dGl~~~~~i~~~a~~~L~pgG~l~~E~g~~-~~~~~~~~~~~ 277 (307)
T PRK11805 211 YVDAEDMADLPAEYRHEPELALAAGDDGLDLVRRILAEAPDYLTEDGVLVVEVGNS-RVHLEEAYPDV 277 (307)
T ss_pred CCCccchhhcCHhhccCccceeeCCCchHHHHHHHHHHHHHhcCCCCEEEEEECcC-HHHHHHHHhhC
Confidence 22110 000 0001111 2367788889999999999863322 34566665543
|
|
| >TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.083 Score=54.16 Aligned_cols=89 Identities=12% Similarity=0.067 Sum_probs=53.6
Q ss_pred hhccccccccC--CeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecC----------
Q 009719 143 VASFGGSMLSE--NILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSR---------- 204 (527)
Q Consensus 143 vgsfga~Ll~r--~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~---------- 204 (527)
.|.++..|..+ +.. +...|.++.+++.|+++ ++. +.+..+|... ++++++||+|+|.-
T Consensus 132 sG~i~~~la~~~~~~~---v~avDis~~al~~A~~n~~~~~~~~~i~~~~~D~~~-~~~~~~fD~Iv~NPPy~~~~~~~~ 207 (284)
T TIGR03533 132 SGCIAIACAYAFPEAE---VDAVDISPDALAVAEINIERHGLEDRVTLIQSDLFA-ALPGRKYDLIVSNPPYVDAEDMAD 207 (284)
T ss_pred hhHHHHHHHHHCCCCE---EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhh-ccCCCCccEEEECCCCCCccchhh
Confidence 34444445443 333 33337788888888754 543 4556666522 34567899999851
Q ss_pred ---ccccccc-------Ch----HHHHHHHhhcccCCcEEEEecC
Q 009719 205 ---CLIPFTA-------YN----ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 205 ---~l~hw~d-------~~----~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+.|.+. ++ ..++.++.++|+|||++++-..
T Consensus 208 l~~~~~~ep~~al~gg~dGl~~~~~il~~a~~~L~~gG~l~~e~g 252 (284)
T TIGR03533 208 LPAEYHHEPELALASGEDGLDLVRRILAEAADHLNENGVLVVEVG 252 (284)
T ss_pred CCHhhhcCHHHHhcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 0111110 00 2368999999999999998764
|
Members of this protein family methylate ribosomal protein L3 on a glutamine side chain. This family is related to HemK, a protein-glutamine methyltranferase for peptide chain release factors. |
| >PF00891 Methyltransf_2: O-methyltransferase; InterPro: IPR001077 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.016 Score=56.96 Aligned_cols=65 Identities=22% Similarity=0.186 Sum_probs=49.7
Q ss_pred HHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChH-HHHHHHhhcccCC--cEEEEecC
Q 009719 167 KAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA-TYLIEVDRLLRPG--GYLVISGP 235 (527)
Q Consensus 167 eaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~-~aL~Ei~RVLRPG--G~lviS~p 235 (527)
+..++.|.+ .-...+..+|.. =|+|. +|+++.+++||+|.+... ..|+.+.+.|+|| |+++|..+
T Consensus 133 p~v~~~~~~-~~rv~~~~gd~f-~~~P~--~D~~~l~~vLh~~~d~~~~~iL~~~~~al~pg~~g~llI~e~ 200 (241)
T PF00891_consen 133 PEVIEQAKE-ADRVEFVPGDFF-DPLPV--ADVYLLRHVLHDWSDEDCVKILRNAAAALKPGKDGRLLIIEM 200 (241)
T ss_dssp HHHHCCHHH-TTTEEEEES-TT-TCCSS--ESEEEEESSGGGS-HHHHHHHHHHHHHHSEECTTEEEEEEEE
T ss_pred Hhhhhcccc-ccccccccccHH-hhhcc--ccceeeehhhhhcchHHHHHHHHHHHHHhCCCCCCeEEEEee
Confidence 455666666 334556666765 56776 999999999999998764 5999999999999 99999775
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This domain includes a range of O-methyltransferases some of which utilise S-adenosyl methionine as substrate []. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. In eukaryotes, DNA methylation has been implicated in the control of several cellular processes, including differentiation, gene regulation, and embryonic development. O-methyltransferases have a common catalytic domain structure, which might be universal among S-adenosyl-L-methionine (AdoMet)-dependent methyltransferases []. Comparative analysis of the predicted amino acid sequences of a number of plant O-methyltransferase cDNA clones show that they share some 32-71% sequence identity, and can be grouped according to the different compounds they utilise as substrates [].; GO: 0008171 O-methyltransferase activity; PDB: 1FPQ_A 1FP1_D 3P9K_B 3P9I_D 3P9C_A 3I53_A 3I5U_A 3I64_A 3I58_A 1ZG3_A .... |
| >TIGR00438 rrmJ cell division protein FtsJ | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.015 Score=55.34 Aligned_cols=56 Identities=13% Similarity=-0.046 Sum_probs=37.5
Q ss_pred cEEeeccccCCC--------CCCCcccEEEecCcc---cccccC-------hHHHHHHHhhcccCCcEEEEecC
Q 009719 180 AFVAMLGTRRLP--------FPAFSFDIVHCSRCL---IPFTAY-------NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 180 a~~~v~dae~LP--------FpD~SFDlV~cs~~l---~hw~d~-------~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.+..+|....+ +++++||+|+|..+. -+|.-+ ...+|.++.|+|||||++++...
T Consensus 74 i~~~~~d~~~~~~~~~l~~~~~~~~~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~~ 147 (188)
T TIGR00438 74 VDFIRGDFTDEEVLNKIRERVGDDKVDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKVF 147 (188)
T ss_pred ceEEEeeCCChhHHHHHHHHhCCCCccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 345555655443 678899999986431 112111 13489999999999999999653
|
|
| >COG2890 HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.043 Score=56.36 Aligned_cols=160 Identities=19% Similarity=0.248 Sum_probs=92.1
Q ss_pred cchhhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHh----hhccc--
Q 009719 347 FEADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVI----YDRGL-- 418 (527)
Q Consensus 347 f~~d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi----~eRGL-- 418 (527)
...||+.+-..+..- +. ..+. +|+|||||.|.-|.+|... |. .+|+-+|-. .-|.++ -..|+
T Consensus 92 Pr~dTe~Lve~~l~~---~~---~~~~--~ilDlGTGSG~iai~la~~~~~--~~V~a~Dis~~Al~~A~~Na~~~~l~~ 161 (280)
T COG2890 92 PRPDTELLVEAALAL---LL---QLDK--RILDLGTGSGAIAIALAKEGPD--AEVIAVDISPDALALARENAERNGLVR 161 (280)
T ss_pred cCCchHHHHHHHHHh---hh---hcCC--cEEEecCChHHHHHHHHhhCcC--CeEEEEECCHHHHHHHHHHHHHcCCcc
Confidence 468899888887621 11 1112 9999999999999999544 33 234444332 333332 33343
Q ss_pred -cccccccCCCCCCCCCccchhhhcCcccccc-----------CC----CCCCCCC-cccccceeecccccCCcEEEEeC
Q 009719 419 -IGVYHDWCEPFSTYPRTYDLIHVSGIESLIK-----------NP----GSNKNSC-SLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 419 -iG~~hdwce~fstYPrtyDLiHa~~~fs~~~-----------~~----~~~~~rC-~~~~illEmDRILRP~G~~iird 481 (527)
+-+..||=++. +.+||+|=++==...-. +| .++.++= -+..++-+..++|+|||++++.-
T Consensus 162 ~~~~~~dlf~~~---~~~fDlIVsNPPYip~~~~~~~~~~~~~EP~~Al~~g~dGl~~~~~i~~~a~~~l~~~g~l~le~ 238 (280)
T COG2890 162 VLVVQSDLFEPL---RGKFDLIVSNPPYIPAEDPELLPEVVRYEPLLALVGGGDGLEVYRRILGEAPDILKPGGVLILEI 238 (280)
T ss_pred EEEEeeeccccc---CCceeEEEeCCCCCCCcccccChhhhccCHHHHHccCccHHHHHHHHHHhhHHHcCCCcEEEEEE
Confidence 22333454444 45888876653222111 00 0011110 12367888999999999999997
Q ss_pred CHHHHHHHHHHHhcCCceeEEecCCCCCCCCceEEEEEe
Q 009719 482 SPEVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATK 520 (527)
Q Consensus 482 ~~~~~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K 520 (527)
..+-.++|+++.....+ .........-.+.+++.++++
T Consensus 239 g~~q~~~v~~~~~~~~~-~~~v~~~~d~~g~~rv~~~~~ 276 (280)
T COG2890 239 GLTQGEAVKALFEDTGF-FEIVETLKDLFGRDRVVLAKL 276 (280)
T ss_pred CCCcHHHHHHHHHhcCC-ceEEEEEecCCCceEEEEEEe
Confidence 76667788888888885 222222223335667776654
|
|
| >TIGR02081 metW methionine biosynthesis protein MetW | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.0086 Score=57.18 Aligned_cols=90 Identities=19% Similarity=0.286 Sum_probs=52.9
Q ss_pred eEeecCCCccchhhhccCC-CeeEEEecCCCC-CCchhHhhhccccccccccCCCCCCCC-CccchhhhcCccccccCCC
Q 009719 376 NIMDMNAFFGGFAAALTSD-PVWVMNVVPARK-SSTLSVIYDRGLIGVYHDWCEPFSTYP-RTYDLIHVSGIESLIKNPG 452 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~-~ntl~vi~eRGLiG~~hdwce~fstYP-rtyDLiHa~~~fs~~~~~~ 452 (527)
+|+|+|||.|.++.+|.+. .+-+..+ +. +..+..+.++|+--+..|..+.++.++ ++||+|-+...|....
T Consensus 16 ~iLDiGcG~G~~~~~l~~~~~~~~~gi---D~s~~~i~~a~~~~~~~~~~d~~~~l~~~~~~sfD~Vi~~~~l~~~~--- 89 (194)
T TIGR02081 16 RVLDLGCGDGELLALLRDEKQVRGYGI---EIDQDGVLACVARGVNVIQGDLDEGLEAFPDKSFDYVILSQTLQATR--- 89 (194)
T ss_pred EEEEeCCCCCHHHHHHHhccCCcEEEE---eCCHHHHHHHHHcCCeEEEEEhhhcccccCCCCcCEEEEhhHhHcCc---
Confidence 7999999999999988643 2212222 22 244445555665322333333233344 7999999988876543
Q ss_pred CCCCCCcccccceeecccccCCcEEEEe
Q 009719 453 SNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 453 ~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
+ ...+|-||-|+ +|.+|+.
T Consensus 90 ---d---~~~~l~e~~r~---~~~~ii~ 108 (194)
T TIGR02081 90 ---N---PEEILDEMLRV---GRHAIVS 108 (194)
T ss_pred ---C---HHHHHHHHHHh---CCeEEEE
Confidence 1 34566666555 5555554
|
This protein is found alongside MetX, of the enzyme that acylates homoserine as a first step toward methionine biosynthesis, in many species. It appears to act in methionine biosynthesis but is not fully characterized. |
| >PRK04457 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.028 Score=56.97 Aligned_cols=137 Identities=15% Similarity=0.108 Sum_probs=69.4
Q ss_pred CCeeeEeecCCCccchhhhccCC-C---eeEEEecCCCCCCchhHhhhc-cccc------cc-cccCCCCCCCCCccchh
Q 009719 372 PAIRNIMDMNAFFGGFAAALTSD-P---VWVMNVVPARKSSTLSVIYDR-GLIG------VY-HDWCEPFSTYPRTYDLI 439 (527)
Q Consensus 372 ~~iRnvmDm~ag~GgFaAaL~~~-~---VwvMnvvp~~~~ntl~vi~eR-GLiG------~~-hdwce~fstYPrtyDLi 439 (527)
..-++|+|+|||.|+++.+|... | |.++=+- +..+.++-+. ++.+ +. .|--+-+...|.+||+|
T Consensus 65 ~~~~~vL~IG~G~G~l~~~l~~~~p~~~v~~VEid----p~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I 140 (262)
T PRK04457 65 PRPQHILQIGLGGGSLAKFIYTYLPDTRQTAVEIN----PQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVI 140 (262)
T ss_pred CCCCEEEEECCCHhHHHHHHHHhCCCCeEEEEECC----HHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEE
Confidence 45678999999999999877432 2 3332221 2333333322 1111 11 12111123446789999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe---CCHHHHHHHHHHHhcCCceeEEecCCCCCCCCceEE
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR---DSPEVIDKVSRIANTVRWTAAVHDKEPGSNGREKIL 516 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir---d~~~~~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiL 516 (527)
=++ .|..-. -........++-++=++|+|||.+++- .+...-..++.+.+.+.-.+.....+ .....|+
T Consensus 141 ~~D-~~~~~~----~~~~l~t~efl~~~~~~L~pgGvlvin~~~~~~~~~~~l~~l~~~F~~~~~~~~~~---~~~N~v~ 212 (262)
T PRK04457 141 LVD-GFDGEG----IIDALCTQPFFDDCRNALSSDGIFVVNLWSRDKRYDRYLERLESSFEGRVLELPAE---SHGNVAV 212 (262)
T ss_pred EEe-CCCCCC----CccccCcHHHHHHHHHhcCCCcEEEEEcCCCchhHHHHHHHHHHhcCCcEEEEecC---CCccEEE
Confidence 654 232110 001122357788889999999999983 33222222333333333222222222 1134788
Q ss_pred EEEe
Q 009719 517 VATK 520 (527)
Q Consensus 517 i~~K 520 (527)
++.|
T Consensus 213 ~a~~ 216 (262)
T PRK04457 213 FAFK 216 (262)
T ss_pred EEEC
Confidence 8877
|
|
| >PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.013 Score=64.82 Aligned_cols=139 Identities=15% Similarity=0.261 Sum_probs=76.8
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhc----cccc----cccccCCCCCCCCCccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDR----GLIG----VYHDWCEPFSTYPRTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eR----GLiG----~~hdwce~fstYPrtyDLiHa~~~ 444 (527)
.+|||+|||.|.++.+|... |-+ .|+-+|-. ..+.++-+. |+-. +..|+-+.+. ++.||+|-++--
T Consensus 140 ~~VLDlG~GsG~iai~la~~~p~~--~v~avDis~~al~~A~~N~~~~~l~~~v~~~~~D~~~~~~--~~~fDlIvsNPP 215 (506)
T PRK01544 140 LNILELGTGSGCIAISLLCELPNA--NVIATDISLDAIEVAKSNAIKYEVTDRIQIIHSNWFENIE--KQKFDFIVSNPP 215 (506)
T ss_pred CEEEEccCchhHHHHHHHHHCCCC--eEEEEECCHHHHHHHHHHHHHcCCccceeeeecchhhhCc--CCCccEEEECCC
Confidence 57999999999999877532 211 22333322 334443332 4321 2234444332 368999988543
Q ss_pred cccccC------------C----CCCCCC-CcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCceeEEecCCC
Q 009719 445 ESLIKN------------P----GSNKNS-CSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAVHDKEP 507 (527)
Q Consensus 445 fs~~~~------------~----~~~~~r-C~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~~~~~~e~ 507 (527)
+..... | ..+.++ -.+..|+-++.++|+|||.+++.-..+--+++.+++....|+.... ..|
T Consensus 216 Yi~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~il~~a~~~L~~gG~l~lEig~~q~~~v~~~~~~~g~~~~~~-~~D 294 (506)
T PRK01544 216 YISHSEKSEMAIETINYEPSIALFAEEDGLQAYFIIAENAKQFLKPNGKIILEIGFKQEEAVTQIFLDHGYNIESV-YKD 294 (506)
T ss_pred CCCchhhhhcCchhhccCcHHHhcCCccHHHHHHHHHHHHHHhccCCCEEEEEECCchHHHHHHHHHhcCCCceEE-Eec
Confidence 322110 0 001111 1123466788999999999999755455667788777777764332 122
Q ss_pred CCCCCceEEEEE
Q 009719 508 GSNGREKILVAT 519 (527)
Q Consensus 508 ~~~~~ekiLi~~ 519 (527)
. .+.++++++.
T Consensus 295 ~-~g~~R~v~~~ 305 (506)
T PRK01544 295 L-QGHSRVILIS 305 (506)
T ss_pred C-CCCceEEEec
Confidence 2 2456777764
|
|
| >PLN02490 MPBQ/MSBQ methyltransferase | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.0061 Score=64.42 Aligned_cols=116 Identities=11% Similarity=0.020 Sum_probs=67.1
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhccc---cccccccCCCCCCCCCccchhhhcCcccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDRGL---IGVYHDWCEPFSTYPRTYDLIHVSGIESLIK 449 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eRGL---iG~~hdwce~fstYPrtyDLiHa~~~fs~~~ 449 (527)
..|||+|||.|.++..+.+. +- -+|.=+|.. +.+..+-++.- +-+.+.=-+.++.-..+||+|-+...+..+.
T Consensus 115 ~~VLDLGcGtG~~~l~La~~~~~--~~VtgVD~S~~mL~~A~~k~~~~~i~~i~gD~e~lp~~~~sFDvVIs~~~L~~~~ 192 (340)
T PLN02490 115 LKVVDVGGGTGFTTLGIVKHVDA--KNVTILDQSPHQLAKAKQKEPLKECKIIEGDAEDLPFPTDYADRYVSAGSIEYWP 192 (340)
T ss_pred CEEEEEecCCcHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHhhhccCCeEEeccHHhCCCCCCceeEEEEcChhhhCC
Confidence 47999999999988776432 11 122222322 44444444321 1111111122222237899998877776553
Q ss_pred CCCCCCCCCcccccceeecccccCCcEEEEeCCH--H---------------HHHHHHHHHhcCCceeE
Q 009719 450 NPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP--E---------------VIDKVSRIANTVRWTAA 501 (527)
Q Consensus 450 ~~~~~~~rC~~~~illEmDRILRP~G~~iird~~--~---------------~~~~i~~i~~~l~W~~~ 501 (527)
+...+|-|+-|+|+|||.+++.+.. + ..+++.+++++.-++..
T Consensus 193 ---------d~~~~L~e~~rvLkPGG~LvIi~~~~p~~~~~r~~~~~~~~~~t~eEl~~lL~~aGF~~V 252 (340)
T PLN02490 193 ---------DPQRGIKEAYRVLKIGGKACLIGPVHPTFWLSRFFADVWMLFPKEEEYIEWFTKAGFKDV 252 (340)
T ss_pred ---------CHHHHHHHHHHhcCCCcEEEEEEecCcchhHHHHhhhhhccCCCHHHHHHHHHHCCCeEE
Confidence 1246899999999999999875421 0 13556666777777643
|
|
| >TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.017 Score=49.57 Aligned_cols=90 Identities=19% Similarity=0.214 Sum_probs=50.5
Q ss_pred eeEeecCCCccchhhhccCC-C-eeEEEecCCCCCCchhH----hhhccccc--cc-cc--cCCCCCCCCCccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTSD-P-VWVMNVVPARKSSTLSV----IYDRGLIG--VY-HD--WCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~-VwvMnvvp~~~~ntl~v----i~eRGLiG--~~-hd--wce~fstYPrtyDLiHa~~ 443 (527)
.+|+|+|||.|.++..+.+. | .-|+-+-+.. ..+.. +.+.|+-. +. .| |+.. .-+.+||.|=+..
T Consensus 21 ~~vldlG~G~G~~~~~l~~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~D~v~~~~ 96 (124)
T TIGR02469 21 DVLWDIGAGSGSITIEAARLVPNGRVYAIERNP--EALRLIERNARRFGVSNIVIVEGDAPEALE--DSLPEPDRVFIGG 96 (124)
T ss_pred CEEEEeCCCCCHHHHHHHHHCCCceEEEEcCCH--HHHHHHHHHHHHhCCCceEEEeccccccCh--hhcCCCCEEEECC
Confidence 48999999999999888654 2 2233332221 22222 12223211 11 11 2221 1235788874432
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
... .+..++-++-|.|+|||++++.
T Consensus 97 ~~~------------~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 97 SGG------------LLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred cch------------hHHHHHHHHHHHcCCCCEEEEE
Confidence 221 2356888999999999999984
|
This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL. |
| >PRK15001 SAM-dependent 23S ribosomal RNA mG1835 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.049 Score=58.49 Aligned_cols=105 Identities=15% Similarity=0.086 Sum_probs=62.2
Q ss_pred eccCcChHHHHHHHHHc----CC----CcEEeeccccCCCCCCCcccEEEecCcccc---cccCh-HHHHHHHhhcccCC
Q 009719 160 FAPRDSHKAQIQFALER----GI----PAFVAMLGTRRLPFPAFSFDIVHCSRCLIP---FTAYN-ATYLIEVDRLLRPG 227 (527)
Q Consensus 160 iAp~D~seaqvq~A~eR----g~----pa~~~v~dae~LPFpD~SFDlV~cs~~l~h---w~d~~-~~aL~Ei~RVLRPG 227 (527)
+...|.++.+++.|++. +. .+.+...|... .+++.+||+|+|.-.++. +.+.. ...+.++.|+||||
T Consensus 255 V~~vD~S~~Av~~A~~N~~~n~~~~~~~v~~~~~D~l~-~~~~~~fDlIlsNPPfh~~~~~~~~ia~~l~~~a~~~LkpG 333 (378)
T PRK15001 255 VVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKIN 333 (378)
T ss_pred EEEEECCHHHHHHHHHHHHHcCcccCceEEEEEccccc-cCCCCCEEEEEECcCcccCccCCHHHHHHHHHHHHHhcccC
Confidence 44458888899988764 22 12344444322 235578999999855432 11111 24899999999999
Q ss_pred cEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeeeecceEEEeC
Q 009719 228 GYLVISGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKK 272 (527)
Q Consensus 228 G~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~~~~v~iwrK 272 (527)
|.|++... ....+.. .++++.. .-+.+++.....|++-
T Consensus 334 G~L~iV~n---r~l~y~~--~L~~~fg--~~~~va~~~kf~vl~a 371 (378)
T PRK15001 334 GELYIVAN---RHLDYFH--KLKKIFG--NCTTIATNNKFVVLKA 371 (378)
T ss_pred CEEEEEEe---cCcCHHH--HHHHHcC--CceEEccCCCEEEEEE
Confidence 99999853 2222222 2332211 1255666677777763
|
|
| >PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.0078 Score=59.09 Aligned_cols=121 Identities=17% Similarity=0.265 Sum_probs=91.1
Q ss_pred hhhccCCCCeeeEeecCCCccchhhhccC-CCeeEEEecCCCCCCchhHhhhccccccccccCCCCCCCC-Cccchhhhc
Q 009719 365 LNVKLGTPAIRNIMDMNAFFGGFAAALTS-DPVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFSTYP-RTYDLIHVS 442 (527)
Q Consensus 365 l~~~i~~~~iRnvmDm~ag~GgFaAaL~~-~~VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwce~fstYP-rtyDLiHa~ 442 (527)
+...|..+ -.|||.|||-|.+.+.|.+ +.|-..-|- ..+..+.-..+||+-=+-+|.-+.++.|| .+||.+=.+
T Consensus 7 I~~~I~pg--srVLDLGCGdG~LL~~L~~~k~v~g~GvE--id~~~v~~cv~rGv~Viq~Dld~gL~~f~d~sFD~VIls 82 (193)
T PF07021_consen 7 IAEWIEPG--SRVLDLGCGDGELLAYLKDEKQVDGYGVE--IDPDNVAACVARGVSVIQGDLDEGLADFPDQSFDYVILS 82 (193)
T ss_pred HHHHcCCC--CEEEecCCCchHHHHHHHHhcCCeEEEEe--cCHHHHHHHHHcCCCEEECCHHHhHhhCCCCCccEEehH
Confidence 33445555 5799999999999999976 677665553 22355777889999888889999999999 999999888
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEe------------------------------CCHH----HHHH
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR------------------------------DSPE----VIDK 488 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir------------------------------d~~~----~~~~ 488 (527)
..+.... .-+.+|-|| ||=|.-+|++ |++. .+..
T Consensus 83 qtLQ~~~---------~P~~vL~Em---lRVgr~~IVsFPNFg~W~~R~~l~~~GrmPvt~~lPy~WYdTPNih~~Ti~D 150 (193)
T PF07021_consen 83 QTLQAVR---------RPDEVLEEM---LRVGRRAIVSFPNFGHWRNRLQLLLRGRMPVTKALPYEWYDTPNIHLCTIKD 150 (193)
T ss_pred hHHHhHh---------HHHHHHHHH---HHhcCeEEEEecChHHHHHHHHHHhcCCCCCCCCCCCcccCCCCcccccHHH
Confidence 7776553 136788898 5557788887 2333 4778
Q ss_pred HHHHHhcCCceeE
Q 009719 489 VSRIANTVRWTAA 501 (527)
Q Consensus 489 i~~i~~~l~W~~~ 501 (527)
.+.+.+.+..++.
T Consensus 151 Fe~lc~~~~i~I~ 163 (193)
T PF07021_consen 151 FEDLCRELGIRIE 163 (193)
T ss_pred HHHHHHHCCCEEE
Confidence 8888888888764
|
Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells []. |
| >KOG3010 consensus Methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.013 Score=59.55 Aligned_cols=114 Identities=19% Similarity=0.077 Sum_probs=74.5
Q ss_pred CCCeeeEeecCCCccchhhhcc-CCCeeEEEecCCCCC-CchhHhhhccccccccccCCCCC--------CCCCccchhh
Q 009719 371 TPAIRNIMDMNAFFGGFAAALT-SDPVWVMNVVPARKS-STLSVIYDRGLIGVYHDWCEPFS--------TYPRTYDLIH 440 (527)
Q Consensus 371 ~~~iRnvmDm~ag~GgFaAaL~-~~~VwvMnvvp~~~~-ntl~vi~eRGLiG~~hdwce~fs--------tYPrtyDLiH 440 (527)
...-|.+.|.|||.| +||..+ +. -=+|+-+|-. .+|++ ..-+---+||+=--+|+ -=+.+-|||-
T Consensus 31 ~~~h~~a~DvG~G~G-qa~~~iae~---~k~VIatD~s~~mL~~-a~k~~~~~y~~t~~~ms~~~~v~L~g~e~SVDlI~ 105 (261)
T KOG3010|consen 31 TEGHRLAWDVGTGNG-QAARGIAEH---YKEVIATDVSEAMLKV-AKKHPPVTYCHTPSTMSSDEMVDLLGGEESVDLIT 105 (261)
T ss_pred CCCcceEEEeccCCC-cchHHHHHh---hhhheeecCCHHHHHH-hhcCCCcccccCCccccccccccccCCCcceeeeh
Confidence 345679999999999 666553 22 1256667655 67774 34444445554333333 2378999999
Q ss_pred hcCccccccCCCCCCCCCcccccceeecccccCCc----EEEEeCCHHHHHHHHHHHhcCCce
Q 009719 441 VSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEG----TVVVRDSPEVIDKVSRIANTVRWT 499 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G----~~iird~~~~~~~i~~i~~~l~W~ 499 (527)
|..+|- =|+++..+=|+-|+|||.| .|..+|+.-+..++.++..+++|+
T Consensus 106 ~Aqa~H----------WFdle~fy~~~~rvLRk~Gg~iavW~Y~dd~v~~pE~dsv~~r~~~~ 158 (261)
T KOG3010|consen 106 AAQAVH----------WFDLERFYKEAYRVLRKDGGLIAVWNYNDDFVDWPEFDSVMLRLYDS 158 (261)
T ss_pred hhhhHH----------hhchHHHHHHHHHHcCCCCCEEEEEEccCCCcCCHHHHHHHHHHhhc
Confidence 987764 4778999999999999999 223344444455555666666664
|
|
| >PF06080 DUF938: Protein of unknown function (DUF938); InterPro: IPR010342 This family consists of several hypothetical proteins from both prokaryotes and eukaryotes | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.045 Score=54.23 Aligned_cols=43 Identities=35% Similarity=0.651 Sum_probs=35.2
Q ss_pred CCCCcccEEEecCccccc---ccChHHHHHHHhhcccCCcEEEEecCC
Q 009719 192 FPAFSFDIVHCSRCLIPF---TAYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 192 FpD~SFDlV~cs~~l~hw---~d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
+..++||+|+|.-++ |. ..-.+ ++.+..++|+|||.|++-+|.
T Consensus 98 ~~~~~~D~i~~~N~l-HI~p~~~~~~-lf~~a~~~L~~gG~L~~YGPF 143 (204)
T PF06080_consen 98 LSPESFDAIFCINML-HISPWSAVEG-LFAGAARLLKPGGLLFLYGPF 143 (204)
T ss_pred cCCCCcceeeehhHH-HhcCHHHHHH-HHHHHHHhCCCCCEEEEeCCc
Confidence 346799999999765 54 33444 999999999999999999984
|
The function of this family is unknown. |
| >PRK00811 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.04 Score=56.40 Aligned_cols=88 Identities=10% Similarity=0.106 Sum_probs=55.5
Q ss_pred ccccccccC-CeeEEeeccCcChHHHHHHHHHcC------C----CcEEeeccccC-CCCCCCcccEEEecCcccccccC
Q 009719 145 SFGGSMLSE-NILTLSFAPRDSHKAQIQFALERG------I----PAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAY 212 (527)
Q Consensus 145 sfga~Ll~r-~V~~msiAp~D~seaqvq~A~eRg------~----pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~ 212 (527)
+.+..++.+ ++. .+...|+.+.+++.|++.- . .+.+..+|+.. ++..+++||+|++... .++...
T Consensus 89 ~~~~~~l~~~~~~--~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDvIi~D~~-dp~~~~ 165 (283)
T PRK00811 89 GTLREVLKHPSVE--KITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAETENSFDVIIVDST-DPVGPA 165 (283)
T ss_pred HHHHHHHcCCCCC--EEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhhCCCcccEEEECCC-CCCCch
Confidence 333445554 333 3333466778888887641 1 23456677544 4556789999998754 343222
Q ss_pred h----HHHHHHHhhcccCCcEEEEecC
Q 009719 213 N----ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 213 ~----~~aL~Ei~RVLRPGG~lviS~p 235 (527)
. ..+++++.|+|+|||.+++...
T Consensus 166 ~~l~t~ef~~~~~~~L~~gGvlv~~~~ 192 (283)
T PRK00811 166 EGLFTKEFYENCKRALKEDGIFVAQSG 192 (283)
T ss_pred hhhhHHHHHHHHHHhcCCCcEEEEeCC
Confidence 1 2378899999999999998654
|
|
| >KOG3045 consensus Predicted RNA methylase involved in rRNA processing [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.043 Score=56.50 Aligned_cols=108 Identities=16% Similarity=0.195 Sum_probs=71.6
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCCCchhHhhhccccccccccCCCCCCCCCccchhhhcCccccccCCCCC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSN 454 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~ 454 (527)
-.|-|||||-|-.|. =...+|.-|-+|+++..=+.-=| .. .+-=.+|-|++- .|+|+-
T Consensus 182 ~vIaD~GCGEakiA~-~~~~kV~SfDL~a~~~~V~~cDm------------~~-vPl~d~svDvaV--~CLSLM------ 239 (325)
T KOG3045|consen 182 IVIADFGCGEAKIAS-SERHKVHSFDLVAVNERVIACDM------------RN-VPLEDESVDVAV--FCLSLM------ 239 (325)
T ss_pred eEEEecccchhhhhh-ccccceeeeeeecCCCceeeccc------------cC-CcCccCcccEEE--eeHhhh------
Confidence 358899999887764 35567888888887664211100 00 111237888754 467753
Q ss_pred CCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHH---HhcCCceeEEecCC
Q 009719 455 KNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRI---ANTVRWTAAVHDKE 506 (527)
Q Consensus 455 ~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i---~~~l~W~~~~~~~e 506 (527)
+-++.+.+.|..|||+|||.++|-+-.+-...++.+ +++|-.++...|.+
T Consensus 240 --gtn~~df~kEa~RiLk~gG~l~IAEv~SRf~dv~~f~r~l~~lGF~~~~~d~~ 292 (325)
T KOG3045|consen 240 --GTNLADFIKEANRILKPGGLLYIAEVKSRFSDVKGFVRALTKLGFDVKHKDVS 292 (325)
T ss_pred --cccHHHHHHHHHHHhccCceEEEEehhhhcccHHHHHHHHHHcCCeeeehhhh
Confidence 346789999999999999999998755544444433 66777877666544
|
|
| >TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.014 Score=56.94 Aligned_cols=95 Identities=19% Similarity=0.240 Sum_probs=59.1
Q ss_pred eeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhccc-cccc-cccCCCCCCCCCccchhhhcCcccccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDRGL-IGVY-HDWCEPFSTYPRTYDLIHVSGIESLIK 449 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eRGL-iG~~-hdwce~fstYPrtyDLiHa~~~fs~~~ 449 (527)
-..|||+|||.|-++.+|... +- .++.-.|-. +.+..+-++-- +.+. .|-.++|+ +++||+|-+.+++.++.
T Consensus 44 ~~~VLDiGCG~G~~~~~L~~~~~~--~~v~giDiS~~~l~~A~~~~~~~~~~~~d~~~~~~--~~sfD~V~~~~vL~hl~ 119 (204)
T TIGR03587 44 IASILELGANIGMNLAALKRLLPF--KHIYGVEINEYAVEKAKAYLPNINIIQGSLFDPFK--DNFFDLVLTKGVLIHIN 119 (204)
T ss_pred CCcEEEEecCCCHHHHHHHHhCCC--CeEEEEECCHHHHHHHHhhCCCCcEEEeeccCCCC--CCCEEEEEECChhhhCC
Confidence 457999999999999998664 21 123333322 44554444210 1111 23233332 48999999999988653
Q ss_pred CCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 450 NPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 450 ~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.=.+..++-||-|++ +++++|.+
T Consensus 120 -------p~~~~~~l~el~r~~--~~~v~i~e 142 (204)
T TIGR03587 120 -------PDNLPTAYRELYRCS--NRYILIAE 142 (204)
T ss_pred -------HHHHHHHHHHHHhhc--CcEEEEEE
Confidence 124567888999998 57888864
|
Members of this small clade are methyltransferases of the pfam08241 family and are observed within operons for the biosynthesis of pseudaminic acid, a component of exopolysaccharide and flagellin glycosyl modifications. Notable among these genomes is Pseudomonas fluorescens PfO-1. Possibly one of the two hydroxyl groups of pseudaminic acid, at positions 4 and 8 is converted to a methoxy group by this enzyme |
| >PF00891 Methyltransf_2: O-methyltransferase; InterPro: IPR001077 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.012 Score=57.85 Aligned_cols=114 Identities=18% Similarity=0.265 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHH-----hhhccCCCCeeeEeecCCCccchhhhccCC-C---eeEEEecCCCCCCchhHhhhc-ccccc
Q 009719 352 RRWRRRVAYYKNT-----LNVKLGTPAIRNIMDMNAFFGGFAAALTSD-P---VWVMNVVPARKSSTLSVIYDR-GLIGV 421 (527)
Q Consensus 352 ~~W~~~v~~Y~~~-----l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~-~---VwvMnvvp~~~~ntl~vi~eR-GLiG~ 421 (527)
+.|...+..+.+. +.....+..+++|+|+|+|.|.|++++... | +.|+- -|..+..+.+. .+--+
T Consensus 74 ~~f~~~m~~~~~~~~~~~~~~~~d~~~~~~vvDvGGG~G~~~~~l~~~~P~l~~~v~D-----lp~v~~~~~~~~rv~~~ 148 (241)
T PF00891_consen 74 KRFNAAMAEYSRLNAFDILLEAFDFSGFKTVVDVGGGSGHFAIALARAYPNLRATVFD-----LPEVIEQAKEADRVEFV 148 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTTTSSEEEEET-TTSHHHHHHHHHSTTSEEEEEE------HHHHCCHHHTTTEEEE
T ss_pred HHHHHHHHhhhhcchhhhhhccccccCccEEEeccCcchHHHHHHHHHCCCCcceeec-----cHhhhhccccccccccc
Confidence 4555555554332 223467788999999999999999999432 2 34433 23223333331 12112
Q ss_pred ccccCCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCC--cEEEEeC
Q 009719 422 YHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPE--GTVVVRD 481 (527)
Q Consensus 422 ~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~--G~~iird 481 (527)
=+| -|.++|. ||++...+++-.|.+ =....||--+=+.|+|| |.++|-|
T Consensus 149 ~gd---~f~~~P~-~D~~~l~~vLh~~~d-------~~~~~iL~~~~~al~pg~~g~llI~e 199 (241)
T PF00891_consen 149 PGD---FFDPLPV-ADVYLLRHVLHDWSD-------EDCVKILRNAAAALKPGKDGRLLIIE 199 (241)
T ss_dssp ES----TTTCCSS-ESEEEEESSGGGS-H-------HHHHHHHHHHHHHSEECTTEEEEEEE
T ss_pred ccc---HHhhhcc-ccceeeehhhhhcch-------HHHHHHHHHHHHHhCCCCCCeEEEEe
Confidence 222 2456788 999999999999851 22357888888999999 9999975
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This domain includes a range of O-methyltransferases some of which utilise S-adenosyl methionine as substrate []. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. In eukaryotes, DNA methylation has been implicated in the control of several cellular processes, including differentiation, gene regulation, and embryonic development. O-methyltransferases have a common catalytic domain structure, which might be universal among S-adenosyl-L-methionine (AdoMet)-dependent methyltransferases []. Comparative analysis of the predicted amino acid sequences of a number of plant O-methyltransferase cDNA clones show that they share some 32-71% sequence identity, and can be grouped according to the different compounds they utilise as substrates [].; GO: 0008171 O-methyltransferase activity; PDB: 1FPQ_A 1FP1_D 3P9K_B 3P9I_D 3P9C_A 3I53_A 3I5U_A 3I64_A 3I58_A 1ZG3_A .... |
| >PRK07580 Mg-protoporphyrin IX methyl transferase; Validated | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.015 Score=56.18 Aligned_cols=99 Identities=13% Similarity=0.100 Sum_probs=57.1
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cccccccccCCCCCCCCCccchhhhcCccccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLI 448 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~ 448 (527)
-.+|||+|||.|.|+.+|.+...- |.-.|.. +.+..+-++ |+-...+-....+..-+.+||+|-+..++.++
T Consensus 64 ~~~vLDvGcG~G~~~~~l~~~~~~---v~~~D~s~~~i~~a~~~~~~~~~~~~i~~~~~d~~~~~~~fD~v~~~~~l~~~ 140 (230)
T PRK07580 64 GLRILDAGCGVGSLSIPLARRGAK---VVASDISPQMVEEARERAPEAGLAGNITFEVGDLESLLGRFDTVVCLDVLIHY 140 (230)
T ss_pred CCEEEEEeCCCCHHHHHHHHcCCE---EEEEECCHHHHHHHHHHHHhcCCccCcEEEEcCchhccCCcCEEEEcchhhcC
Confidence 468999999999999988765432 2223322 334444332 22111111112233335789999998888655
Q ss_pred cCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 449 KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 449 ~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
. .-.+..++-++-|++.+++.+.+...
T Consensus 141 ~-------~~~~~~~l~~l~~~~~~~~~i~~~~~ 167 (230)
T PRK07580 141 P-------QEDAARMLAHLASLTRGSLIFTFAPY 167 (230)
T ss_pred C-------HHHHHHHHHHHHhhcCCeEEEEECCc
Confidence 3 22355677777787766665554443
|
|
| >PRK13699 putative methylase; Provisional | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.066 Score=53.35 Aligned_cols=53 Identities=13% Similarity=0.098 Sum_probs=34.5
Q ss_pred EeeccccCC--CCCCCcccEEEec--Cc--ccccc----------cChHHHHHHHhhcccCCcEEEEec
Q 009719 182 VAMLGTRRL--PFPAFSFDIVHCS--RC--LIPFT----------AYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 182 ~~v~dae~L--PFpD~SFDlV~cs--~~--l~hw~----------d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
+..+|+..+ .+||+|+|+|+.+ +. ..+.. +.....+.|+.|||||||.+++..
T Consensus 4 l~~gD~le~l~~lpd~SVDLIiTDPPY~i~~~~~~~~~~~~~~~~ew~~~~l~E~~RVLKpgg~l~if~ 72 (227)
T PRK13699 4 FILGNCIDVMARFPDNAVDFILTDPPYLVGFRDRQGRTIAGDKTDEWLQPACNEMYRVLKKDALMVSFY 72 (227)
T ss_pred EEechHHHHHHhCCccccceEEeCCCcccccccCCCcccccccHHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 344565443 6889999999987 11 11110 111248999999999999998743
|
|
| >PRK14966 unknown domain/N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase fusion protein; Provisional | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.074 Score=57.96 Aligned_cols=160 Identities=12% Similarity=0.070 Sum_probs=85.4
Q ss_pred hhhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccC-CCeeEEEecCCCCC-CchhHhhh----ccc-c-c
Q 009719 349 ADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTS-DPVWVMNVVPARKS-STLSVIYD----RGL-I-G 420 (527)
Q Consensus 349 ~d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~-~~VwvMnvvp~~~~-ntl~vi~e----RGL-i-G 420 (527)
.+|+.+.+.+-.. + ..+ .+|+|+|||.|.++.+|.. .+-. +|.-.|.. ..+.++-+ .|+ + =
T Consensus 236 peTE~LVe~aL~~---l----~~~--~rVLDLGcGSG~IaiaLA~~~p~a--~VtAVDiS~~ALe~AreNa~~~g~rV~f 304 (423)
T PRK14966 236 PETEHLVEAVLAR---L----PEN--GRVWDLGTGSGAVAVTVALERPDA--FVRASDISPPALETARKNAADLGARVEF 304 (423)
T ss_pred ccHHHHHHHhhhc---c----CCC--CEEEEEeChhhHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCcEEE
Confidence 5666666655332 2 222 2799999999999987753 2321 22222322 33333322 232 1 1
Q ss_pred cccccCCCCCCCCCccchhhhcCccccccC---------------CCCCCCCCc-ccccceeecccccCCcEEEEeCCHH
Q 009719 421 VYHDWCEPFSTYPRTYDLIHVSGIESLIKN---------------PGSNKNSCS-LVDLMVEMDRMLRPEGTVVVRDSPE 484 (527)
Q Consensus 421 ~~hdwce~fstYPrtyDLiHa~~~fs~~~~---------------~~~~~~rC~-~~~illEmDRILRP~G~~iird~~~ 484 (527)
+..|+.+....-...||+|-++--+..-.+ ...+.+... +..++-+.-+.|+|||++++--..+
T Consensus 305 i~gDl~e~~l~~~~~FDLIVSNPPYI~~~e~~l~~~~v~~EP~~AL~gG~dGL~~yr~Ii~~a~~~LkpgG~lilEiG~~ 384 (423)
T PRK14966 305 AHGSWFDTDMPSEGKWDIIVSNPPYIENGDKHLLQGDLRFEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFD 384 (423)
T ss_pred EEcchhccccccCCCccEEEECCCCCCcchhhhcchhhhcCHHHHhhCCCchHHHHHHHHHHHHHhcCCCcEEEEEECcc
Confidence 223554431101246999988654321100 000001111 2245556678899999998865555
Q ss_pred HHHHHHHHHhcCCceeEEecCCCCCCCCceEEEEEec
Q 009719 485 VIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 485 ~~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
--+.+++++++..|+....-. .-.+.++++++++.
T Consensus 385 Q~e~V~~ll~~~Gf~~v~v~k--Dl~G~dR~v~~~~~ 419 (423)
T PRK14966 385 QGAAVRGVLAENGFSGVETLP--DLAGLDRVTLGKYM 419 (423)
T ss_pred HHHHHHHHHHHCCCcEEEEEE--cCCCCcEEEEEEEh
Confidence 666888888887776433211 12356899998763
|
|
| >PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.035 Score=58.29 Aligned_cols=64 Identities=11% Similarity=0.042 Sum_probs=45.8
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++.+++.|+++ |.. +.+..+|+...+...+.||+|+++..+.+ ....+.++|||||++++..
T Consensus 112 Dis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~~~~~fD~Ii~~~g~~~-------ip~~~~~~LkpgG~Lvv~~ 180 (322)
T PRK13943 112 EYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVPEFAPYDVIFVTVGVDE-------VPETWFTQLKEGGRVIVPI 180 (322)
T ss_pred ECCHHHHHHHHHHHHHcCCCcEEEEeCChhhcccccCCccEEEECCchHH-------hHHHHHHhcCCCCEEEEEe
Confidence 5567788777653 443 45566787777666688999998865543 2345678999999998854
|
|
| >TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.033 Score=57.10 Aligned_cols=123 Identities=22% Similarity=0.257 Sum_probs=67.0
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhh----ccc---cc-cccccCCCCCCCCCccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD----RGL---IG-VYHDWCEPFSTYPRTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e----RGL---iG-~~hdwce~fstYPrtyDLiHa~~~ 444 (527)
.+|+|+|||.|.++.+|... +-. +|+-+|.. ..+.++-+ .|+ |- +..|+-+.++ +..||+|=++-=
T Consensus 123 ~~vLDlG~GsG~i~~~la~~~~~~--~v~avDis~~al~~A~~n~~~~~~~~~i~~~~~D~~~~~~--~~~fD~Iv~NPP 198 (284)
T TIGR03533 123 KRILDLCTGSGCIAIACAYAFPEA--EVDAVDISPDALAVAEINIERHGLEDRVTLIQSDLFAALP--GRKYDLIVSNPP 198 (284)
T ss_pred CEEEEEeCchhHHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccC--CCCccEEEECCC
Confidence 57999999999999998653 211 22333332 33333332 354 21 1223333332 257999887622
Q ss_pred cccccC-----------C----CCCCCCCc-ccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCceeEE
Q 009719 445 ESLIKN-----------P----GSNKNSCS-LVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 445 fs~~~~-----------~----~~~~~rC~-~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~~~ 502 (527)
+..... | ..+.+... ...++-+.-+.|+|||.+++.-..+. .+++++.....|.-..
T Consensus 199 y~~~~~~~~l~~~~~~ep~~al~gg~dGl~~~~~il~~a~~~L~~gG~l~~e~g~~~-~~v~~~~~~~~~~~~~ 271 (284)
T TIGR03533 199 YVDAEDMADLPAEYHHEPELALASGEDGLDLVRRILAEAADHLNENGVLVVEVGNSM-EALEEAYPDVPFTWLE 271 (284)
T ss_pred CCCccchhhCCHhhhcCHHHHhcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECcCH-HHHHHHHHhCCCceee
Confidence 211000 0 00011111 24677888899999999998744333 5788877765554433
|
Members of this protein family methylate ribosomal protein L3 on a glutamine side chain. This family is related to HemK, a protein-glutamine methyltranferase for peptide chain release factors. |
| >COG2521 Predicted archaeal methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.05 Score=55.34 Aligned_cols=86 Identities=17% Similarity=0.194 Sum_probs=50.2
Q ss_pred hhccccccccCCe-eEEeeccCcChHHHHHHHHH----cCC---CcEEeeccccCC--CCCCCcccEEEec-----Cccc
Q 009719 143 VASFGGSMLSENI-LTLSFAPRDSHKAQIQFALE----RGI---PAFVAMLGTRRL--PFPAFSFDIVHCS-----RCLI 207 (527)
Q Consensus 143 vgsfga~Ll~r~V-~~msiAp~D~seaqvq~A~e----Rg~---pa~~~v~dae~L--PFpD~SFDlV~cs-----~~l~ 207 (527)
.|-++..-+++|+ .+.+|.- | +.-+++|.- +++ ...+..+|+.++ .|+|+|||+|+-. ++-+
T Consensus 145 LGYtAi~a~~rGA~~VitvEk-d--p~VLeLa~lNPwSr~l~~~~i~iilGD~~e~V~~~~D~sfDaIiHDPPRfS~Age 221 (287)
T COG2521 145 LGYTAIEALERGAIHVITVEK-D--PNVLELAKLNPWSRELFEIAIKIILGDAYEVVKDFDDESFDAIIHDPPRFSLAGE 221 (287)
T ss_pred ccHHHHHHHHcCCcEEEEEee-C--CCeEEeeccCCCCccccccccEEecccHHHHHhcCCccccceEeeCCCccchhhh
Confidence 3444445566776 4444421 2 233444432 111 234566776554 5999999999732 2211
Q ss_pred ccccChHHHHHHHhhcccCCcEEEEec
Q 009719 208 PFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 208 hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
- ....+.+|++|||||||+++--+
T Consensus 222 L---YseefY~El~RiLkrgGrlFHYv 245 (287)
T COG2521 222 L---YSEEFYRELYRILKRGGRLFHYV 245 (287)
T ss_pred H---hHHHHHHHHHHHcCcCCcEEEEe
Confidence 1 11238999999999999998644
|
|
| >PRK07402 precorrin-6B methylase; Provisional | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.1 Score=49.85 Aligned_cols=38 Identities=18% Similarity=0.282 Sum_probs=28.5
Q ss_pred cccccceeecccccCCcEEEEeCC-HHHHHHHHHHHhcC
Q 009719 459 SLVDLMVEMDRMLRPEGTVVVRDS-PEVIDKVSRIANTV 496 (527)
Q Consensus 459 ~~~~illEmDRILRP~G~~iird~-~~~~~~i~~i~~~l 496 (527)
.+..++-++-|+|+|||.+++-.. .+.+..+.+..+.+
T Consensus 120 ~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~ 158 (196)
T PRK07402 120 PIKEILQAVWQYLKPGGRLVATASSLEGLYAISEGLAQL 158 (196)
T ss_pred CHHHHHHHHHHhcCCCeEEEEEeecHHHHHHHHHHHHhc
Confidence 457889999999999999998863 44555566666554
|
|
| >TIGR02021 BchM-ChlM magnesium protoporphyrin O-methyltransferase | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.029 Score=54.41 Aligned_cols=96 Identities=7% Similarity=0.092 Sum_probs=60.6
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccc-------cccccccCCCCCCCCCccchhhhcCcc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGL-------IGVYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGL-------iG~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
-.+|+|+|||.|.|+..|.+...= |.=.|.. +.+..+.+|.- +... +..+...|.+||+|=+..++
T Consensus 56 ~~~vLDiGcG~G~~~~~la~~~~~---v~gvD~s~~~i~~a~~~~~~~~~~~~i~~~---~~d~~~~~~~fD~ii~~~~l 129 (219)
T TIGR02021 56 GKRVLDAGCGTGLLSIELAKRGAI---VKAVDISEQMVQMARNRAQGRDVAGNVEFE---VNDLLSLCGEFDIVVCMDVL 129 (219)
T ss_pred CCEEEEEeCCCCHHHHHHHHCCCE---EEEEECCHHHHHHHHHHHHhcCCCCceEEE---ECChhhCCCCcCEEEEhhHH
Confidence 468999999999999999876542 3333433 45555555421 1111 11222234789988776665
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
..+. .-.+..++-++.|+++|++++.+...
T Consensus 130 ~~~~-------~~~~~~~l~~i~~~~~~~~~i~~~~~ 159 (219)
T TIGR02021 130 IHYP-------ASDMAKALGHLASLTKERVIFTFAPK 159 (219)
T ss_pred HhCC-------HHHHHHHHHHHHHHhCCCEEEEECCC
Confidence 5442 23456788899999998888887643
|
This model represents the S-adenosylmethionine-dependent O-methyltransferase responsible for methylation of magnesium protoporphyrin IX. This step is essentiasl for the biosynthesis of both chlorophyll and bacteriochlorophyll. This model encompasses two closely related clades, from cyanobacteria (and plants) where it is called ChlM and other photosynthetic bacteria where it is known as BchM. |
| >PRK09328 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.085 Score=52.46 Aligned_cols=74 Identities=20% Similarity=0.358 Sum_probs=46.2
Q ss_pred eccCcChHHHHHHHHHc---CC--CcEEeeccccCCCCCCCcccEEEecCcccc------ccc-----------------
Q 009719 160 FAPRDSHKAQIQFALER---GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIP------FTA----------------- 211 (527)
Q Consensus 160 iAp~D~seaqvq~A~eR---g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~h------w~d----------------- 211 (527)
+...|.++.+++.|+++ +. .+.+..+|... ++++++||+|+|.--.+. ...
T Consensus 135 v~~iDis~~~l~~a~~n~~~~~~~~i~~~~~d~~~-~~~~~~fD~Iv~npPy~~~~~~~~~~~~v~~~ep~~al~~g~~g 213 (275)
T PRK09328 135 VTAVDISPEALAVARRNAKHGLGARVEFLQGDWFE-PLPGGRFDLIVSNPPYIPEADIHLLQPEVRDHEPHLALFGGEDG 213 (275)
T ss_pred EEEEECCHHHHHHHHHHHHhCCCCcEEEEEccccC-cCCCCceeEEEECCCcCCcchhhhCCchhhhcCCchhhcCCCCH
Confidence 33447778888888765 21 34555566522 445789999998521110 000
Q ss_pred --ChHHHHHHHhhcccCCcEEEEec
Q 009719 212 --YNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 212 --~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
.-..++.++.++|||||++++..
T Consensus 214 ~~~~~~~~~~~~~~Lk~gG~l~~e~ 238 (275)
T PRK09328 214 LDFYRRIIEQAPRYLKPGGWLLLEI 238 (275)
T ss_pred HHHHHHHHHHHHHhcccCCEEEEEE
Confidence 01237788889999999999964
|
|
| >KOG2352 consensus Predicted spermine/spermidine synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.039 Score=60.66 Aligned_cols=69 Identities=29% Similarity=0.333 Sum_probs=48.5
Q ss_pred cChHHHHHHHHHcCC---C-cEEeeccccCCCCCCCcccEEEecCcccccccChH---------HHHHHHhhcccCCcEE
Q 009719 164 DSHKAQIQFALERGI---P-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA---------TYLIEVDRLLRPGGYL 230 (527)
Q Consensus 164 D~seaqvq~A~eRg~---p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~---------~aL~Ei~RVLRPGG~l 230 (527)
|.|.--+.....++. + ..+.++|...|.|+|+|||+|+-=-.+.+...+.. .-+.|++|||+|||++
T Consensus 78 D~S~V~V~~m~~~~~~~~~~~~~~~~d~~~l~fedESFdiVIdkGtlDal~~de~a~~~~~~v~~~~~eVsrvl~~~gk~ 157 (482)
T KOG2352|consen 78 DSSSVVVAAMQVRNAKERPEMQMVEMDMDQLVFEDESFDIVIDKGTLDALFEDEDALLNTAHVSNMLDEVSRVLAPGGKY 157 (482)
T ss_pred cccHHHHHHHHhccccCCcceEEEEecchhccCCCcceeEEEecCccccccCCchhhhhhHHhhHHHhhHHHHhccCCEE
Confidence 444444444444432 2 34677899999999999999997666666543332 2578999999999997
Q ss_pred EE
Q 009719 231 VI 232 (527)
Q Consensus 231 vi 232 (527)
+.
T Consensus 158 ~s 159 (482)
T KOG2352|consen 158 IS 159 (482)
T ss_pred EE
Confidence 65
|
|
| >PRK11805 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.35 E-value=0.11 Score=54.10 Aligned_cols=91 Identities=12% Similarity=0.048 Sum_probs=53.8
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecC------------
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSR------------ 204 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~------------ 204 (527)
.|.++.+|..+.- ...+...|.++.+++.|+++ ++. +.+..+|... ++++++||+|+|.-
T Consensus 144 sG~iai~la~~~p-~~~V~avDis~~al~~A~~n~~~~~l~~~i~~~~~D~~~-~l~~~~fDlIvsNPPyi~~~~~~~l~ 221 (307)
T PRK11805 144 SGCIAIACAYAFP-DAEVDAVDISPDALAVAEINIERHGLEDRVTLIESDLFA-ALPGRRYDLIVSNPPYVDAEDMADLP 221 (307)
T ss_pred hhHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEECchhh-hCCCCCccEEEECCCCCCccchhhcC
Confidence 4444445544310 11233347788888888754 442 4566667532 34567899999861
Q ss_pred -ccccccc-------Ch----HHHHHHHhhcccCCcEEEEecC
Q 009719 205 -CLIPFTA-------YN----ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 205 -~l~hw~d-------~~----~~aL~Ei~RVLRPGG~lviS~p 235 (527)
-+.|.+. ++ ..++.++.++|+|||++++-..
T Consensus 222 ~~~~~eP~~AL~gg~dGl~~~~~i~~~a~~~L~pgG~l~~E~g 264 (307)
T PRK11805 222 AEYRHEPELALAAGDDGLDLVRRILAEAPDYLTEDGVLVVEVG 264 (307)
T ss_pred HhhccCccceeeCCCchHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 0112111 01 2378999999999999999654
|
|
| >PF07942 N2227: N2227-like protein; InterPro: IPR012901 This family features sequences that are similar to a region of hypothetical yeast gene product N2227 (P53934 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.11 Score=53.45 Aligned_cols=85 Identities=20% Similarity=0.296 Sum_probs=57.9
Q ss_pred EeeccccCCCCCC---CcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCCCCCCCch---------hHHHHH
Q 009719 182 VAMLGTRRLPFPA---FSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQD---------KEWADL 249 (527)
Q Consensus 182 ~~v~dae~LPFpD---~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp~~~~~~~---------~~w~~i 249 (527)
...+|-..+.-++ ++||+|++.+ ++.-..+--.+|..|.++|||||+|+=-||--|-..+. -.|+++
T Consensus 148 m~aGDF~e~y~~~~~~~~~d~VvT~F-FIDTA~Ni~~Yi~tI~~lLkpgG~WIN~GPLlyh~~~~~~~~~~sveLs~eEi 226 (270)
T PF07942_consen 148 MCAGDFLEVYGPDENKGSFDVVVTCF-FIDTAENIIEYIETIEHLLKPGGYWINFGPLLYHFEPMSIPNEMSVELSLEEI 226 (270)
T ss_pred EecCccEEecCCcccCCcccEEEEEE-EeechHHHHHHHHHHHHHhccCCEEEecCCccccCCCCCCCCCcccCCCHHHH
Confidence 3445555554444 8999998764 33433333349999999999999988888743211111 259999
Q ss_pred HHHHHhcceEEeeeecce
Q 009719 250 QAVARALCYELIAVDGNT 267 (527)
Q Consensus 250 ~~l~~~mcW~~~~~~~~v 267 (527)
.++.+.+-|+...++..+
T Consensus 227 ~~l~~~~GF~~~~~~~~i 244 (270)
T PF07942_consen 227 KELIEKLGFEIEKEESSI 244 (270)
T ss_pred HHHHHHCCCEEEEEEEee
Confidence 999999999998765433
|
This is thought to be expressed during meiosis and may be involved in the defence response to stressful conditions []. |
| >PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.033 Score=52.39 Aligned_cols=113 Identities=19% Similarity=0.205 Sum_probs=62.4
Q ss_pred eeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhh----hccc---cccccccCCCCCCCCCccchhhhcCc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIY----DRGL---IGVYHDWCEPFSTYPRTYDLIHVSGI 444 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~----eRGL---iG~~hdwce~fstYPrtyDLiHa~~~ 444 (527)
-.+|+|+|||+|-.+.+|... +-..+-.+ |.. +-+..+. .-|+ --+.+|+.+.+. +..||+|=++--
T Consensus 32 ~~~vLDlG~G~G~i~~~la~~~~~~~v~~v--Di~~~a~~~a~~n~~~n~~~~v~~~~~d~~~~~~--~~~fD~Iv~NPP 107 (170)
T PF05175_consen 32 GGRVLDLGCGSGVISLALAKRGPDAKVTAV--DINPDALELAKRNAERNGLENVEVVQSDLFEALP--DGKFDLIVSNPP 107 (170)
T ss_dssp TCEEEEETSTTSHHHHHHHHTSTCEEEEEE--ESBHHHHHHHHHHHHHTTCTTEEEEESSTTTTCC--TTCEEEEEE---
T ss_pred CCeEEEecCChHHHHHHHHHhCCCCEEEEE--cCCHHHHHHHHHHHHhcCcccccccccccccccc--ccceeEEEEccc
Confidence 456999999999888877443 22221111 222 2233222 2232 234556666554 589999877633
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEE--EEeCCHHHHHHHHHHHh
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTV--VVRDSPEVIDKVSRIAN 494 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~--iird~~~~~~~i~~i~~ 494 (527)
|..- .......+..++-+-=++|+|||.+ +++.....-..++++..
T Consensus 108 ~~~~----~~~~~~~~~~~i~~a~~~Lk~~G~l~lv~~~~~~~~~~l~~~f~ 155 (170)
T PF05175_consen 108 FHAG----GDDGLDLLRDFIEQARRYLKPGGRLFLVINSHLGYERLLKELFG 155 (170)
T ss_dssp SBTT----SHCHHHHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS
T ss_pred hhcc----cccchhhHHHHHHHHHHhccCCCEEEEEeecCCChHHHHHHhcC
Confidence 2210 0001123567888999999999977 55555444444555554
|
; GO: 0008168 methyltransferase activity; PDB: 1WY7_A 1DUS_A 2OZV_A 2PJD_A 1VQ1_A 1NV9_A 1SG9_C 1NV8_A 3Q87_B 3DMF_A .... |
| >KOG2361 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.14 Score=52.27 Aligned_cols=72 Identities=24% Similarity=0.258 Sum_probs=51.6
Q ss_pred cChHHHHHHHHHcCC------CcEEeecccc--CCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALERGI------PAFVAMLGTR--RLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eRg~------pa~~~v~dae--~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++..+++.+++.. -+.+.-.... .-|.+.+++|.|++-++|.-.+... ..++..+.|+|||||.+++..
T Consensus 104 Dfsp~Ai~~vk~~~~~~e~~~~afv~Dlt~~~~~~~~~~~svD~it~IFvLSAi~pek~~~a~~nl~~llKPGG~llfrD 183 (264)
T KOG2361|consen 104 DFSPRAIELVKKSSGYDESRVEAFVWDLTSPSLKEPPEEGSVDIITLIFVLSAIHPEKMQSVIKNLRTLLKPGGSLLFRD 183 (264)
T ss_pred CCChHHHHHHHhccccchhhhcccceeccchhccCCCCcCccceEEEEEEEeccChHHHHHHHHHHHHHhCCCcEEEEee
Confidence 777777777766521 1222222223 3467799999999999887765443 469999999999999999986
Q ss_pred C
Q 009719 235 P 235 (527)
Q Consensus 235 p 235 (527)
.
T Consensus 184 Y 184 (264)
T KOG2361|consen 184 Y 184 (264)
T ss_pred c
Confidence 5
|
|
| >PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=93.78 E-value=0.052 Score=52.47 Aligned_cols=88 Identities=20% Similarity=0.234 Sum_probs=47.9
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCCCchhHhhhc----cc--cccccccCCCCCCCC--CccchhhhcCcc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDR----GL--IGVYHDWCEPFSTYP--RTYDLIHVSGIE 445 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~ntl~vi~eR----GL--iG~~hdwce~fstYP--rtyDLiHa~~~f 445 (527)
-..|||+|||.|.+++.|....--|..|-.. ++-+..+-++ |+ +-+.+. ..+.++| .+||+|.++..+
T Consensus 79 ~~~VLeiG~GsG~~t~~la~~~~~v~~vd~~--~~~~~~a~~~~~~~~~~~v~~~~~--d~~~~~~~~~~fD~I~~~~~~ 154 (212)
T PRK00312 79 GDRVLEIGTGSGYQAAVLAHLVRRVFSVERI--KTLQWEAKRRLKQLGLHNVSVRHG--DGWKGWPAYAPFDRILVTAAA 154 (212)
T ss_pred CCEEEEECCCccHHHHHHHHHhCEEEEEeCC--HHHHHHHHHHHHHCCCCceEEEEC--CcccCCCcCCCcCEEEEccCc
Confidence 3579999999999988765431112222111 1222222221 33 111111 1223343 689999886544
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
.. +.-++-+.|+|||.+++.
T Consensus 155 ~~---------------~~~~l~~~L~~gG~lv~~ 174 (212)
T PRK00312 155 PE---------------IPRALLEQLKEGGILVAP 174 (212)
T ss_pred hh---------------hhHHHHHhcCCCcEEEEE
Confidence 32 223455899999999885
|
|
| >PF05219 DREV: DREV methyltransferase; InterPro: IPR007884 This family contains DREV protein homologues from several eukaryotes | Back alignment and domain information |
|---|
Probab=93.76 E-value=0.11 Score=53.36 Aligned_cols=70 Identities=19% Similarity=0.319 Sum_probs=49.7
Q ss_pred eccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 160 FAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 160 iAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
+..++.|..|...-.+||..+. ++....=.+..||+|.|--+|-.- +.+...|.+|++.|+|+|+++++.
T Consensus 119 v~aTE~S~~Mr~rL~~kg~~vl----~~~~w~~~~~~fDvIscLNvLDRc-~~P~~LL~~i~~~l~p~G~lilAv 188 (265)
T PF05219_consen 119 VYATEASPPMRWRLSKKGFTVL----DIDDWQQTDFKFDVISCLNVLDRC-DRPLTLLRDIRRALKPNGRLILAV 188 (265)
T ss_pred EEeecCCHHHHHHHHhCCCeEE----ehhhhhccCCceEEEeehhhhhcc-CCHHHHHHHHHHHhCCCCEEEEEE
Confidence 4445667788777778886433 222233335689999998877443 344459999999999999999965
|
The function of this protein is unknown []. However, these proteins appear to be related to other methyltransferases. |
| >PF11968 DUF3321: Putative methyltransferase (DUF3321); InterPro: IPR021867 This family is conserved in fungi and is annotated as being a nucleolar protein | Back alignment and domain information |
|---|
Probab=93.69 E-value=0.21 Score=50.08 Aligned_cols=80 Identities=16% Similarity=0.185 Sum_probs=53.5
Q ss_pred eccccCCCC---CCCcccEEEecCcccccccChH--HHHHHHhhcccCCcE-----EEEecCCCCCC-CchhHHHHHHHH
Q 009719 184 MLGTRRLPF---PAFSFDIVHCSRCLIPFTAYNA--TYLIEVDRLLRPGGY-----LVISGPPVQWP-KQDKEWADLQAV 252 (527)
Q Consensus 184 v~dae~LPF---pD~SFDlV~cs~~l~hw~d~~~--~aL~Ei~RVLRPGG~-----lviS~pp~~~~-~~~~~w~~i~~l 252 (527)
+.|-...|. +++.||+|.||++|-..++..+ .-|+-+.+.|||+|. |++-.|..--. ..|..-++++++
T Consensus 89 qqDFm~rplp~~~~e~FdvIs~SLVLNfVP~p~~RG~Ml~r~~~fL~~~g~~~~~~LFlVlP~~Cv~NSRy~~~~~l~~i 168 (219)
T PF11968_consen 89 QQDFMERPLPKNESEKFDVISLSLVLNFVPDPKQRGEMLRRAHKFLKPPGLSLFPSLFLVLPLPCVTNSRYMTEERLREI 168 (219)
T ss_pred eeccccCCCCCCcccceeEEEEEEEEeeCCCHHHHHHHHHHHHHHhCCCCccCcceEEEEeCchHhhcccccCHHHHHHH
Confidence 345444444 4889999999999977776543 489999999999999 88877732111 122233455566
Q ss_pred HHhcceEEeee
Q 009719 253 ARALCYELIAV 263 (527)
Q Consensus 253 ~~~mcW~~~~~ 263 (527)
.++|.++.+..
T Consensus 169 m~~LGf~~~~~ 179 (219)
T PF11968_consen 169 MESLGFTRVKY 179 (219)
T ss_pred HHhCCcEEEEE
Confidence 67777765544
|
|
| >TIGR03438 probable methyltransferase | Back alignment and domain information |
|---|
Probab=93.55 E-value=0.035 Score=57.14 Aligned_cols=115 Identities=13% Similarity=0.160 Sum_probs=65.7
Q ss_pred HHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc------cc--cccccccC
Q 009719 356 RRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR------GL--IGVYHDWC 426 (527)
Q Consensus 356 ~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR------GL--iG~~hdwc 426 (527)
.....+.+.+...+..+ .+|+|+|||.|.++..|.+.-.=.-++++.|-. .-|..+.++ ++ .++..|-+
T Consensus 48 ~il~~~~~~ia~~~~~~--~~iLELGcGtG~~t~~Ll~~l~~~~~~~~iDiS~~mL~~a~~~l~~~~p~~~v~~i~gD~~ 125 (301)
T TIGR03438 48 AILERHADEIAAATGAG--CELVELGSGSSRKTRLLLDALRQPARYVPIDISADALKESAAALAADYPQLEVHGICADFT 125 (301)
T ss_pred HHHHHHHHHHHHhhCCC--CeEEecCCCcchhHHHHHHhhccCCeEEEEECCHHHHHHHHHHHHhhCCCceEEEEEEccc
Confidence 33344444444444443 479999999999988886541002356777755 566666554 22 24445555
Q ss_pred CCCCCCCCcc----c-hhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 427 EPFSTYPRTY----D-LIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 427 e~fstYPrty----D-LiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
+.++ +|..+ + ++.....|.... .=....+|-++=+.|+|||.++|.
T Consensus 126 ~~~~-~~~~~~~~~~~~~~~gs~~~~~~-------~~e~~~~L~~i~~~L~pgG~~lig 176 (301)
T TIGR03438 126 QPLA-LPPEPAAGRRLGFFPGSTIGNFT-------PEEAVAFLRRIRQLLGPGGGLLIG 176 (301)
T ss_pred chhh-hhcccccCCeEEEEecccccCCC-------HHHHHHHHHHHHHhcCCCCEEEEe
Confidence 4432 23333 2 333333333221 122356899999999999999985
|
This model represents a distinct set of uncharacterized proteins found in the bacteria. Analysis by PSI-BLAST shows remote sequence homology to methyltransferases |
| >TIGR00536 hemK_fam HemK family putative methylases | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.19 Score=51.26 Aligned_cols=74 Identities=15% Similarity=0.111 Sum_probs=48.2
Q ss_pred ccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEec-------------Cccccccc----------
Q 009719 161 APRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCS-------------RCLIPFTA---------- 211 (527)
Q Consensus 161 Ap~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs-------------~~l~hw~d---------- 211 (527)
...|.++.+++.|+++ +.. +.+..+|... +++++.||+|+|. .++.|-+.
T Consensus 142 ~avDis~~al~~a~~n~~~~~~~~~v~~~~~d~~~-~~~~~~fDlIvsNPPyi~~~~~~~~~~~~~~eP~~AL~gg~dgl 220 (284)
T TIGR00536 142 IAVDISPDALAVAEENAEKNQLEHRVEFIQSNLFE-PLAGQKIDIIVSNPPYIDEEDLADLPNVVRFEPLLALVGGDDGL 220 (284)
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhc-cCcCCCccEEEECCCCCCcchhhcCCcccccCcHHHhcCCCcHH
Confidence 3347788888888754 443 4566666533 5566689999985 11222110
Q ss_pred -ChHHHHHHHhhcccCCcEEEEecC
Q 009719 212 -YNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 212 -~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.-..++.++.++|+|||++++-..
T Consensus 221 ~~~~~ii~~a~~~L~~gG~l~~e~g 245 (284)
T TIGR00536 221 NILRQIIELAPDYLKPNGFLVCEIG 245 (284)
T ss_pred HHHHHHHHHHHHhccCCCEEEEEEC
Confidence 112378899999999999999664
|
The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. Both E. coli and H. influenzae have two members rather than one. The members from the Mycoplasmas have an additional C-terminal domain. |
| >COG0500 SmtA SAM-dependent methyltransferases [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=93.49 E-value=0.085 Score=42.63 Aligned_cols=94 Identities=21% Similarity=0.259 Sum_probs=55.4
Q ss_pred EeecCCCccc--hhhhccCCCeeEEEecCCCCCCchhHhhhcc-------ccccccccCCC-CCCCC-CccchhhhcCcc
Q 009719 377 IMDMNAFFGG--FAAALTSDPVWVMNVVPARKSSTLSVIYDRG-------LIGVYHDWCEP-FSTYP-RTYDLIHVSGIE 445 (527)
Q Consensus 377 vmDm~ag~Gg--FaAaL~~~~VwvMnvvp~~~~ntl~vi~eRG-------LiG~~hdwce~-fstYP-rtyDLiHa~~~f 445 (527)
++|.|||.|. +.+.+......+..+-+.. ..+...-.+. +-....+.... ++.-. .+||++ +....
T Consensus 52 ~ld~~~g~g~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~ 128 (257)
T COG0500 52 VLDIGCGTGRLALLARLGGRGAYVVGVDLSP--EMLALARARAEGAGLGLVDFVVADALGGVLPFEDSASFDLV-ISLLV 128 (257)
T ss_pred eEEecCCcCHHHHHHHhCCCCceEEEEeCCH--HHHHHHHhhhhhcCCCceEEEEeccccCCCCCCCCCceeEE-eeeee
Confidence 9999999998 6666666554444422111 2222211111 12233333321 22212 389999 76555
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
..+. . ...++-|+-|+|+|+|.+++.+.
T Consensus 129 ~~~~------~---~~~~~~~~~~~l~~~g~~~~~~~ 156 (257)
T COG0500 129 LHLL------P---PAKALRELLRVLKPGGRLVLSDL 156 (257)
T ss_pred hhcC------C---HHHHHHHHHHhcCCCcEEEEEec
Confidence 5443 1 67899999999999999999864
|
|
| >COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=93.44 E-value=0.027 Score=58.36 Aligned_cols=125 Identities=19% Similarity=0.237 Sum_probs=81.2
Q ss_pred CccccchhhH-HHHHHHHHHHHHhhh-ccCCCCeeeEeecCCCccchhhhccCC-CeeEEEecCCCCC--CchhHhhhcc
Q 009719 343 GYDVFEADSR-RWRRRVAYYKNTLNV-KLGTPAIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS--STLSVIYDRG 417 (527)
Q Consensus 343 ~~~~f~~d~~-~W~~~v~~Y~~~l~~-~i~~~~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~--ntl~vi~eRG 417 (527)
|-.-|+.++. .=..+..++...+.. .|+.| -.|||+|||-|+++-.+... +|-|+.|--+.+. .--+-|-++|
T Consensus 42 scayf~~~~~tL~eAQ~~k~~~~~~kl~L~~G--~~lLDiGCGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~g 119 (283)
T COG2230 42 SCAYFEDPDMTLEEAQRAKLDLILEKLGLKPG--MTLLDIGCGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARG 119 (283)
T ss_pred eeEEeCCCCCChHHHHHHHHHHHHHhcCCCCC--CEEEEeCCChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcC
Confidence 4444555542 333333333322221 25555 47999999999999888655 7877766443322 2224477799
Q ss_pred cc----ccccccCCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 418 LI----GVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 418 Li----G~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
|- =.++||.+. .-.||=|=+-+.|-+.. .=+..+++-=+.++|+|||-+++-
T Consensus 120 l~~~v~v~l~d~rd~----~e~fDrIvSvgmfEhvg-------~~~~~~ff~~~~~~L~~~G~~llh 175 (283)
T COG2230 120 LEDNVEVRLQDYRDF----EEPFDRIVSVGMFEHVG-------KENYDDFFKKVYALLKPGGRMLLH 175 (283)
T ss_pred CCcccEEEecccccc----ccccceeeehhhHHHhC-------cccHHHHHHHHHhhcCCCceEEEE
Confidence 86 457888754 23388888888887653 234578888899999999999886
|
|
| >smart00650 rADc Ribosomal RNA adenine dimethylases | Back alignment and domain information |
|---|
Probab=93.44 E-value=0.13 Score=48.20 Aligned_cols=124 Identities=9% Similarity=0.036 Sum_probs=72.3
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCC---CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI---PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIE 219 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~---pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~E 219 (527)
.|.++..|++++..+..+ |.++.+++.++++.. ...+..+|+..+++++..||.|++..=. |.. .. .+..
T Consensus 24 ~G~lt~~l~~~~~~v~~v---E~~~~~~~~~~~~~~~~~~v~ii~~D~~~~~~~~~~~d~vi~n~Py-~~~--~~-~i~~ 96 (169)
T smart00650 24 KGALTEELLERAARVTAI---EIDPRLAPRLREKFAAADNLTVIHGDALKFDLPKLQPYKVVGNLPY-NIS--TP-ILFK 96 (169)
T ss_pred ccHHHHHHHhcCCeEEEE---ECCHHHHHHHHHHhccCCCEEEEECchhcCCccccCCCEEEECCCc-ccH--HH-HHHH
Confidence 566667777775333333 667788888877632 3567788999999998889999987432 322 22 3333
Q ss_pred Hhh--cccCCcEEEEecCCC----CCCCchhHHHHHHHHHHhcc-eEEeeeecceEEEeCCC
Q 009719 220 VDR--LLRPGGYLVISGPPV----QWPKQDKEWADLQAVARALC-YELIAVDGNTVIWKKPV 274 (527)
Q Consensus 220 i~R--VLRPGG~lviS~pp~----~~~~~~~~w~~i~~l~~~mc-W~~~~~~~~v~iwrKp~ 274 (527)
+.. -+.++|.|++---.. ..+ ..+.|..+.-++..+| |+.+-+-..-.||=+|.
T Consensus 97 ~l~~~~~~~~~~l~~q~e~a~rl~~~~-~~~~y~~lsv~~~~~~~~~~~~~v~~~~F~P~Pk 157 (169)
T smart00650 97 LLEEPPAFRDAVLMVQKEVARRLAAKP-GSKDYGRLSVLLQPYFDVKILFKVPPEAFRPPPK 157 (169)
T ss_pred HHhcCCCcceEEEEEEHHHhHHhcCCC-CCCcccHHHHHHHHHeeEEEEEEEChhhCCCCCC
Confidence 332 255899998854311 111 1233445555555444 55555544445555544
|
|
| >COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.12 Score=54.12 Aligned_cols=68 Identities=29% Similarity=0.453 Sum_probs=44.0
Q ss_pred cChHHHHHHHHHc----CCCcEEeeccccCCCCCC-CcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GIPAFVAMLGTRRLPFPA-FSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD-~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|..+.-++.|++. +++..........+.++. +.||+|+|+- |-+ .-..+..++.|.|||||++++|+-
T Consensus 192 DiDp~AV~aa~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANI-LA~---vl~~La~~~~~~lkpgg~lIlSGI 264 (300)
T COG2264 192 DIDPQAVEAARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANI-LAE---VLVELAPDIKRLLKPGGRLILSGI 264 (300)
T ss_pred cCCHHHHHHHHHHHHHcCCchhhhcccccchhhcccCcccEEEehh-hHH---HHHHHHHHHHHHcCCCceEEEEee
Confidence 5555566666643 555311111223344555 5999999985 322 223488999999999999999994
|
|
| >PF02390 Methyltransf_4: Putative methyltransferase ; InterPro: IPR003358 This entry represents tRNA (guanine-N-7) methyltransferase (2 | Back alignment and domain information |
|---|
Probab=93.21 E-value=0.033 Score=54.18 Aligned_cols=124 Identities=15% Similarity=0.192 Sum_probs=71.5
Q ss_pred eeEeecCCCccchhhhc--cCCCeeEEEecCCCC--CCchhHhhhccccccccccCCCCCC----C-CCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAAL--TSDPVWVMNVVPARK--SSTLSVIYDRGLIGVYHDWCEPFST----Y-PRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL--~~~~VwvMnvvp~~~--~ntl~vi~eRGLiG~~hdwce~fst----Y-PrtyDLiHa~~~f 445 (527)
..++|+|||.|.|.+++ ...+.-++-|-.... ...+.-+..+||--+.--.+.+... . |.+.|-||-. |
T Consensus 19 ~l~lEIG~G~G~~l~~~A~~~Pd~n~iGiE~~~~~v~~a~~~~~~~~l~Nv~~~~~da~~~l~~~~~~~~v~~i~i~--F 96 (195)
T PF02390_consen 19 PLILEIGCGKGEFLIELAKRNPDINFIGIEIRKKRVAKALRKAEKRGLKNVRFLRGDARELLRRLFPPGSVDRIYIN--F 96 (195)
T ss_dssp EEEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHHTTSSEEEEES-CTTHHHHHSTTTSEEEEEEE--S
T ss_pred CeEEEecCCCCHHHHHHHHHCCCCCEEEEecchHHHHHHHHHHHhhcccceEEEEccHHHHHhhcccCCchheEEEe--C
Confidence 38999999999999988 333443333333322 2456667777874333333444321 2 3677777653 4
Q ss_pred c-cccCCCCCCCCCcc-cccceeecccccCCcEEEEe-CCHHHHHHHHHHHhcC--CceeE
Q 009719 446 S-LIKNPGSNKNSCSL-VDLMVEMDRMLRPEGTVVVR-DSPEVIDKVSRIANTV--RWTAA 501 (527)
Q Consensus 446 s-~~~~~~~~~~rC~~-~~illEmDRILRP~G~~iir-d~~~~~~~i~~i~~~l--~W~~~ 501 (527)
. .|-. ....+|.-+ ...|-++-|+|+|||.+.+. |..++.+.+.+.+... .++..
T Consensus 97 PDPWpK-~rH~krRl~~~~fl~~~~~~L~~gG~l~~~TD~~~y~~~~~~~~~~~~~~f~~~ 156 (195)
T PF02390_consen 97 PDPWPK-KRHHKRRLVNPEFLELLARVLKPGGELYFATDVEEYAEWMLEQFEESHPGFENI 156 (195)
T ss_dssp -----S-GGGGGGSTTSHHHHHHHHHHEEEEEEEEEEES-HHHHHHHHHHHHHHSTTEEEE
T ss_pred CCCCcc-cchhhhhcCCchHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhcCcCeEEc
Confidence 2 2320 001123333 47888999999999999887 5666777777776653 55544
|
1.1.33 from EC), which catalyses the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. Capping of the pre-mRNA 5' end by addition a monomethylated guanosine cap (m(7)G) is an essential and the earliest modification in the biogenesis of mRNA []. The reaction is catalysed by three enzymes: triphosphatase, guanylyltransferase, and tRNA (guanine-N-7) methyltransferase [, ].; GO: 0008176 tRNA (guanine-N7-)-methyltransferase activity, 0006400 tRNA modification; PDB: 3DXZ_A 3DXY_A 3DXX_A 3CKK_A 3P2I_B 3P2K_D 3P2E_A 3MTE_B 3PB3_B 1YZH_B .... |
| >PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.15 Score=50.67 Aligned_cols=81 Identities=20% Similarity=0.217 Sum_probs=51.5
Q ss_pred ccccccCCeeEEeeccCcChHHHHHHHH-HcCC-------C---------cEEeeccccCCCCCC-CcccEEE--ecCcc
Q 009719 147 GGSMLSENILTLSFAPRDSHKAQIQFAL-ERGI-------P---------AFVAMLGTRRLPFPA-FSFDIVH--CSRCL 206 (527)
Q Consensus 147 ga~Ll~r~V~~msiAp~D~seaqvq~A~-eRg~-------p---------a~~~v~dae~LPFpD-~SFDlV~--cs~~l 206 (527)
..+|.++|-.++.+ |+++.-++.|. +++. . +.+.++|.-.|+-.+ +.||+|. .++|.
T Consensus 52 ~~~La~~G~~VvGv---Dls~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gDfF~l~~~~~g~fD~iyDr~~l~A 128 (218)
T PF05724_consen 52 MLWLAEQGHDVVGV---DLSPTAIEQAFEENNLEPTVTSVGGFKRYQAGRITIYCGDFFELPPEDVGKFDLIYDRTFLCA 128 (218)
T ss_dssp HHHHHHTTEEEEEE---ES-HHHHHHHHHHCTTEEECTTCTTEEEETTSSEEEEES-TTTGGGSCHHSEEEEEECSSTTT
T ss_pred HHHHHHCCCeEEEE---ecCHHHHHHHHHHhccCCCcccccceeeecCCceEEEEcccccCChhhcCCceEEEEeccccc
Confidence 44677887655555 77888888774 4443 1 134567776766544 4899998 34454
Q ss_pred cccccChHHHHHHHhhcccCCcEEE
Q 009719 207 IPFTAYNATYLIEVDRLLRPGGYLV 231 (527)
Q Consensus 207 ~hw~d~~~~aL~Ei~RVLRPGG~lv 231 (527)
+|-... ..+..-+.++|||||.++
T Consensus 129 lpp~~R-~~Ya~~l~~ll~p~g~~l 152 (218)
T PF05724_consen 129 LPPEMR-ERYAQQLASLLKPGGRGL 152 (218)
T ss_dssp S-GGGH-HHHHHHHHHCEEEEEEEE
T ss_pred CCHHHH-HHHHHHHHHHhCCCCcEE
Confidence 553222 349999999999999943
|
Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B. |
| >PHA03411 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.21 Score=51.79 Aligned_cols=77 Identities=13% Similarity=0.027 Sum_probs=53.2
Q ss_pred eccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccC-------------------hHHHHHHH
Q 009719 160 FAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY-------------------NATYLIEV 220 (527)
Q Consensus 160 iAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~-------------------~~~aL~Ei 220 (527)
+...|.++.+++.|+++...+.+..+|...++. +++||+|++.-.+.|.... -...++.+
T Consensus 91 V~gVDisp~al~~Ar~n~~~v~~v~~D~~e~~~-~~kFDlIIsNPPF~~l~~~d~~~~~~~~GG~~g~~~l~~~~~l~~v 169 (279)
T PHA03411 91 IVCVELNPEFARIGKRLLPEAEWITSDVFEFES-NEKFDVVISNPPFGKINTTDTKDVFEYTGGEFEFKVMTLGQKFADV 169 (279)
T ss_pred EEEEECCHHHHHHHHHhCcCCEEEECchhhhcc-cCCCcEEEEcCCccccCchhhhhhhhhccCccccccccHHHHHhhh
Confidence 334477889999998864446677788776653 5789999997766653221 12367888
Q ss_pred hhcccCCcEEEE--ecCCC
Q 009719 221 DRLLRPGGYLVI--SGPPV 237 (527)
Q Consensus 221 ~RVLRPGG~lvi--S~pp~ 237 (527)
.++|+|+|.+.+ ++.|.
T Consensus 170 ~~~L~p~G~~~~~yss~~~ 188 (279)
T PHA03411 170 GYFIVPTGSAGFAYSGRPY 188 (279)
T ss_pred HheecCCceEEEEEecccc
Confidence 999999998765 44444
|
|
| >PRK07402 precorrin-6B methylase; Provisional | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.15 Score=48.72 Aligned_cols=67 Identities=21% Similarity=0.169 Sum_probs=42.7
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccC-CCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++.+++.|+++ ++. +.+..+|+.. ++.-...+|.++... ......++.++.|+|+|||+|++..+
T Consensus 71 D~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d~v~~~~-----~~~~~~~l~~~~~~LkpgG~li~~~~ 143 (196)
T PRK07402 71 ERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPDRVCIEG-----GRPIKEILQAVWQYLKPGGRLVATAS 143 (196)
T ss_pred eCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCCEEEEEC-----CcCHHHHHHHHHHhcCCCeEEEEEee
Confidence 6667777777653 443 4455566543 333334467765421 12223499999999999999999876
|
|
| >PF02390 Methyltransf_4: Putative methyltransferase ; InterPro: IPR003358 This entry represents tRNA (guanine-N-7) methyltransferase (2 | Back alignment and domain information |
|---|
Probab=93.15 E-value=0.11 Score=50.53 Aligned_cols=82 Identities=22% Similarity=0.301 Sum_probs=49.8
Q ss_pred cCCeeEEeeccCcChHHHHHHHHHcCCC-cEEeeccccC-CC--CCCCcccEEEecCcccccccChH--------HHHHH
Q 009719 152 SENILTLSFAPRDSHKAQIQFALERGIP-AFVAMLGTRR-LP--FPAFSFDIVHCSRCLIPFTAYNA--------TYLIE 219 (527)
Q Consensus 152 ~r~V~~msiAp~D~seaqvq~A~eRg~p-a~~~v~dae~-LP--FpD~SFDlV~cs~~l~hw~d~~~--------~aL~E 219 (527)
+.+++++++...-.. ...+.+.+++++ +.+..+|+.. |+ ++++++|.|+..+- -+|+.... .+|.+
T Consensus 41 d~n~iGiE~~~~~v~-~a~~~~~~~~l~Nv~~~~~da~~~l~~~~~~~~v~~i~i~FP-DPWpK~rH~krRl~~~~fl~~ 118 (195)
T PF02390_consen 41 DINFIGIEIRKKRVA-KALRKAEKRGLKNVRFLRGDARELLRRLFPPGSVDRIYINFP-DPWPKKRHHKRRLVNPEFLEL 118 (195)
T ss_dssp TSEEEEEES-HHHHH-HHHHHHHHHTTSSEEEEES-CTTHHHHHSTTTSEEEEEEES------SGGGGGGSTTSHHHHHH
T ss_pred CCCEEEEecchHHHH-HHHHHHHhhcccceEEEEccHHHHHhhcccCCchheEEEeCC-CCCcccchhhhhcCCchHHHH
Confidence 456666666443222 223344455765 4566677766 43 56899999997654 46655322 39999
Q ss_pred HhhcccCCcEEEEecC
Q 009719 220 VDRLLRPGGYLVISGP 235 (527)
Q Consensus 220 i~RVLRPGG~lviS~p 235 (527)
+.|+|+|||.+.+.+-
T Consensus 119 ~~~~L~~gG~l~~~TD 134 (195)
T PF02390_consen 119 LARVLKPGGELYFATD 134 (195)
T ss_dssp HHHHEEEEEEEEEEES
T ss_pred HHHHcCCCCEEEEEeC
Confidence 9999999999999763
|
1.1.33 from EC), which catalyses the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. Capping of the pre-mRNA 5' end by addition a monomethylated guanosine cap (m(7)G) is an essential and the earliest modification in the biogenesis of mRNA []. The reaction is catalysed by three enzymes: triphosphatase, guanylyltransferase, and tRNA (guanine-N-7) methyltransferase [, ].; GO: 0008176 tRNA (guanine-N7-)-methyltransferase activity, 0006400 tRNA modification; PDB: 3DXZ_A 3DXY_A 3DXX_A 3CKK_A 3P2I_B 3P2K_D 3P2E_A 3MTE_B 3PB3_B 1YZH_B .... |
| >PRK14966 unknown domain/N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase fusion protein; Provisional | Back alignment and domain information |
|---|
Probab=92.77 E-value=0.58 Score=51.15 Aligned_cols=93 Identities=16% Similarity=0.114 Sum_probs=55.9
Q ss_pred cCcChHHHHHHHHHc----CCCcEEeeccccCCCCC-CCcccEEEecCcccccc--------------------cCh---
Q 009719 162 PRDSHKAQIQFALER----GIPAFVAMLGTRRLPFP-AFSFDIVHCSRCLIPFT--------------------AYN--- 213 (527)
Q Consensus 162 p~D~seaqvq~A~eR----g~pa~~~v~dae~LPFp-D~SFDlV~cs~~l~hw~--------------------d~~--- 213 (527)
..|.++.+++.|+++ +..+.+..+|.....++ +++||+|+|+-=.+.-. +++
T Consensus 280 AVDiS~~ALe~AreNa~~~g~rV~fi~gDl~e~~l~~~~~FDLIVSNPPYI~~~e~~l~~~~v~~EP~~AL~gG~dGL~~ 359 (423)
T PRK14966 280 ASDISPPALETARKNAADLGARVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGDKHLLQGDLRFEPQIALTDFSDGLSC 359 (423)
T ss_pred EEECCHHHHHHHHHHHHHcCCcEEEEEcchhccccccCCCccEEEECCCCCCcchhhhcchhhhcCHHHHhhCCCchHHH
Confidence 347788899888764 44556677776443343 46899999963111000 000
Q ss_pred -HHHHHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEe
Q 009719 214 -ATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELI 261 (527)
Q Consensus 214 -~~aL~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~ 261 (527)
...+.++.+.|+|||++++.... + .-+.++++.+...|..+
T Consensus 360 yr~Ii~~a~~~LkpgG~lilEiG~-~------Q~e~V~~ll~~~Gf~~v 401 (423)
T PRK14966 360 IRTLAQGAPDRLAEGGFLLLEHGF-D------QGAAVRGVLAENGFSGV 401 (423)
T ss_pred HHHHHHHHHHhcCCCcEEEEEECc-c------HHHHHHHHHHHCCCcEE
Confidence 12566677899999999886542 1 12456666666556443
|
|
| >COG0220 Predicted S-adenosylmethionine-dependent methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.56 E-value=0.31 Score=48.95 Aligned_cols=81 Identities=19% Similarity=0.203 Sum_probs=57.8
Q ss_pred CCeeEEeeccCcChHHHHHHHHHcCC-CcEEeeccccCC-C--CCCCcccEEEecCcccccccChH--------HHHHHH
Q 009719 153 ENILTLSFAPRDSHKAQIQFALERGI-PAFVAMLGTRRL-P--FPAFSFDIVHCSRCLIPFTAYNA--------TYLIEV 220 (527)
Q Consensus 153 r~V~~msiAp~D~seaqvq~A~eRg~-pa~~~v~dae~L-P--FpD~SFDlV~cs~~l~hw~d~~~--------~aL~Ei 220 (527)
.+.+++++-.. .-...++.+.+.++ .+.+...|+..+ + ++++|.|.|...+- -+|+...+ .+|.++
T Consensus 73 ~nfiGiEi~~~-~v~~~l~k~~~~~l~Nlri~~~DA~~~l~~~~~~~sl~~I~i~FP-DPWpKkRH~KRRl~~~~fl~~~ 150 (227)
T COG0220 73 KNFLGIEIRVP-GVAKALKKIKELGLKNLRLLCGDAVEVLDYLIPDGSLDKIYINFP-DPWPKKRHHKRRLTQPEFLKLY 150 (227)
T ss_pred CCEEEEEEehH-HHHHHHHHHHHcCCCcEEEEcCCHHHHHHhcCCCCCeeEEEEECC-CCCCCccccccccCCHHHHHHH
Confidence 35666666442 23445666677888 677777787553 4 35669999997765 47765433 399999
Q ss_pred hhcccCCcEEEEecC
Q 009719 221 DRLLRPGGYLVISGP 235 (527)
Q Consensus 221 ~RVLRPGG~lviS~p 235 (527)
.|+|||||.|.+.+-
T Consensus 151 a~~Lk~gG~l~~aTD 165 (227)
T COG0220 151 ARKLKPGGVLHFATD 165 (227)
T ss_pred HHHccCCCEEEEEec
Confidence 999999999999874
|
|
| >PF05219 DREV: DREV methyltransferase; InterPro: IPR007884 This family contains DREV protein homologues from several eukaryotes | Back alignment and domain information |
|---|
Probab=92.44 E-value=0.082 Score=54.28 Aligned_cols=90 Identities=19% Similarity=0.398 Sum_probs=61.3
Q ss_pred CeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccc--cccccccCCCCCCCCCccchhhhcCcccccc
Q 009719 373 AIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGL--IGVYHDWCEPFSTYPRTYDLIHVSGIESLIK 449 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGL--iG~~hdwce~fstYPrtyDLiHa~~~fs~~~ 449 (527)
+..++||+|||-|+--+.|... .=+|.-++.. .-.--.-+||+ +++ .||-+. +..||+|-|-.++.
T Consensus 94 ~~~~lLDlGAGdG~VT~~l~~~---f~~v~aTE~S~~Mr~rL~~kg~~vl~~-~~w~~~----~~~fDvIscLNvLD--- 162 (265)
T PF05219_consen 94 KDKSLLDLGAGDGEVTERLAPL---FKEVYATEASPPMRWRLSKKGFTVLDI-DDWQQT----DFKFDVISCLNVLD--- 162 (265)
T ss_pred cCCceEEecCCCcHHHHHHHhh---cceEEeecCCHHHHHHHHhCCCeEEeh-hhhhcc----CCceEEEeehhhhh---
Confidence 5778999999999988877431 1123333333 11223346886 443 347643 56799999876664
Q ss_pred CCCCCCCCCccc-ccceeecccccCCcEEEEe
Q 009719 450 NPGSNKNSCSLV-DLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 450 ~~~~~~~rC~~~-~illEmDRILRP~G~~iir 480 (527)
||.-. .+|-+|-+-|+|+|.+|+.
T Consensus 163 -------Rc~~P~~LL~~i~~~l~p~G~lilA 187 (265)
T PF05219_consen 163 -------RCDRPLTLLRDIRRALKPNGRLILA 187 (265)
T ss_pred -------ccCCHHHHHHHHHHHhCCCCEEEEE
Confidence 88754 7788999999999999996
|
The function of this protein is unknown []. However, these proteins appear to be related to other methyltransferases. |
| >TIGR00417 speE spermidine synthase | Back alignment and domain information |
|---|
Probab=92.35 E-value=0.17 Score=51.35 Aligned_cols=75 Identities=12% Similarity=0.091 Sum_probs=46.8
Q ss_pred eccCcChHHHHHHHHHcC---------CCcEEeeccccC-CCCCCCcccEEEecCcccccccC----hHHHHHHHhhccc
Q 009719 160 FAPRDSHKAQIQFALERG---------IPAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAY----NATYLIEVDRLLR 225 (527)
Q Consensus 160 iAp~D~seaqvq~A~eRg---------~pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~----~~~aL~Ei~RVLR 225 (527)
+...|.++++++.|++.- ....+..+|+.. |.-.+++||+|++.... +.... ...++..+.+.|+
T Consensus 99 v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~~~~yDvIi~D~~~-~~~~~~~l~~~ef~~~~~~~L~ 177 (270)
T TIGR00417 99 ATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADTENTFDVIIVDSTD-PVGPAETLFTKEFYELLKKALN 177 (270)
T ss_pred EEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhCCCCccEEEEeCCC-CCCcccchhHHHHHHHHHHHhC
Confidence 333456677888887641 113344455422 33346899999987542 22221 1237899999999
Q ss_pred CCcEEEEecC
Q 009719 226 PGGYLVISGP 235 (527)
Q Consensus 226 PGG~lviS~p 235 (527)
|||.+++...
T Consensus 178 pgG~lv~~~~ 187 (270)
T TIGR00417 178 EDGIFVAQSE 187 (270)
T ss_pred CCcEEEEcCC
Confidence 9999998754
|
the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM. |
| >KOG1271 consensus Methyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.29 E-value=0.32 Score=48.15 Aligned_cols=92 Identities=25% Similarity=0.348 Sum_probs=61.7
Q ss_pred hhccccccc----cCCeeEEeeccCcChHHHHHHHH----HcCCC--cEEeeccccCCCCCCCcccEEEec-----Cccc
Q 009719 143 VASFGGSML----SENILTLSFAPRDSHKAQIQFAL----ERGIP--AFVAMLGTRRLPFPAFSFDIVHCS-----RCLI 207 (527)
Q Consensus 143 vgsfga~Ll----~r~V~~msiAp~D~seaqvq~A~----eRg~p--a~~~v~dae~LPFpD~SFDlV~cs-----~~l~ 207 (527)
.|+--++|| +.+... .+...|.+++.|++|. .++.+ +.+.++|...--|-.+.||+|+=- -.|+
T Consensus 74 LGtGNG~~L~~L~~egf~~-~L~GvDYs~~AV~LA~niAe~~~~~n~I~f~q~DI~~~~~~~~qfdlvlDKGT~DAisLs 152 (227)
T KOG1271|consen 74 LGTGNGHLLFQLAKEGFQS-KLTGVDYSEKAVELAQNIAERDGFSNEIRFQQLDITDPDFLSGQFDLVLDKGTLDAISLS 152 (227)
T ss_pred ccCCchHHHHHHHHhcCCC-CccccccCHHHHHHHHHHHHhcCCCcceeEEEeeccCCcccccceeEEeecCceeeeecC
Confidence 455555554 334331 1667788888888775 34666 678888876668888999999722 1222
Q ss_pred cc--ccChHHHHHHHhhcccCCcEEEEecC
Q 009719 208 PF--TAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 208 hw--~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+- ......++.-+.+.|+|||.|+|+.-
T Consensus 153 ~d~~~~r~~~Y~d~v~~ll~~~gifvItSC 182 (227)
T KOG1271|consen 153 PDGPVGRLVVYLDSVEKLLSPGGIFVITSC 182 (227)
T ss_pred CCCcccceeeehhhHhhccCCCcEEEEEec
Confidence 21 12223488899999999999999876
|
|
| >TIGR01177 conserved hypothetical protein TIGR01177 | Back alignment and domain information |
|---|
Probab=92.29 E-value=0.048 Score=56.75 Aligned_cols=118 Identities=14% Similarity=0.101 Sum_probs=58.6
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhH----hhhccccc--cc-cccCCCCCCCCCccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSV----IYDRGLIG--VY-HDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~v----i~eRGLiG--~~-hdwce~fstYPrtyDLiHa~~~fs 446 (527)
..|||.+||+|+|+..+.....- |+-.|.. ..+.. +-.-|+-. ++ .|-. .++.-..+||+|=++--|.
T Consensus 184 ~~vLDp~cGtG~~lieaa~~~~~---v~g~Di~~~~~~~a~~nl~~~g~~~i~~~~~D~~-~l~~~~~~~D~Iv~dPPyg 259 (329)
T TIGR01177 184 DRVLDPFCGTGGFLIEAGLMGAK---VIGCDIDWKMVAGARINLEHYGIEDFFVKRGDAT-KLPLSSESVDAIATDPPYG 259 (329)
T ss_pred CEEEECCCCCCHHHHHHHHhCCe---EEEEcCCHHHHHHHHHHHHHhCCCCCeEEecchh-cCCcccCCCCEEEECCCCc
Confidence 37999999999995443222222 2222322 22221 11224432 11 1211 1221136899888763332
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCc
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRW 498 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W 498 (527)
.-..............+|-|+-|+|+|||++++--..+. .++++++.--|
T Consensus 260 ~~~~~~~~~~~~l~~~~l~~~~r~Lk~gG~lv~~~~~~~--~~~~~~~~~g~ 309 (329)
T TIGR01177 260 RSTTAAGDGLESLYERSLEEFHEVLKSEGWIVYAVPTRI--DLESLAEDAFR 309 (329)
T ss_pred CcccccCCchHHHHHHHHHHHHHHccCCcEEEEEEcCCC--CHHHHHhhcCc
Confidence 111000000112346889999999999999876543221 34455666666
|
This family is found exclusively in the Archaea. |
| >PRK01581 speE spermidine synthase; Validated | Back alignment and domain information |
|---|
Probab=92.24 E-value=0.21 Score=53.71 Aligned_cols=76 Identities=17% Similarity=0.206 Sum_probs=50.2
Q ss_pred eeccCcChHHHHHHHHHc--------C----CCcEEeeccccC-CCCCCCcccEEEecCccccccc-----ChHHHHHHH
Q 009719 159 SFAPRDSHKAQIQFALER--------G----IPAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTA-----YNATYLIEV 220 (527)
Q Consensus 159 siAp~D~seaqvq~A~eR--------g----~pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d-----~~~~aL~Ei 220 (527)
.+...|+++++++.|++. + -.+.+..+|+.. |+-.++.||+|++... .+... ....++..+
T Consensus 176 ~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~~~~~YDVIIvDl~-DP~~~~~~~LyT~EFy~~~ 254 (374)
T PRK01581 176 HVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSSPSSLYDVIIIDFP-DPATELLSTLYTSELFARI 254 (374)
T ss_pred eEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHhcCCCccEEEEcCC-CccccchhhhhHHHHHHHH
Confidence 344446778999999862 1 124455667654 5556788999998742 12111 112388999
Q ss_pred hhcccCCcEEEEecC
Q 009719 221 DRLLRPGGYLVISGP 235 (527)
Q Consensus 221 ~RVLRPGG~lviS~p 235 (527)
.|.|+|||.|+....
T Consensus 255 ~~~LkPgGV~V~Qs~ 269 (374)
T PRK01581 255 ATFLTEDGAFVCQSN 269 (374)
T ss_pred HHhcCCCcEEEEecC
Confidence 999999999988643
|
|
| >PRK04457 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=92.17 E-value=0.17 Score=51.39 Aligned_cols=71 Identities=11% Similarity=0.104 Sum_probs=45.7
Q ss_pred CcChHHHHHHHHHc-CC-----CcEEeeccccC-CCCCCCcccEEEecCcc-ccccc--ChHHHHHHHhhcccCCcEEEE
Q 009719 163 RDSHKAQIQFALER-GI-----PAFVAMLGTRR-LPFPAFSFDIVHCSRCL-IPFTA--YNATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 163 ~D~seaqvq~A~eR-g~-----pa~~~v~dae~-LPFpD~SFDlV~cs~~l-~hw~d--~~~~aL~Ei~RVLRPGG~lvi 232 (527)
.|..+++++.|++. +. ...+..+|+.. ++-..++||+|++...- ...+. ....++.++.++|+|||.|++
T Consensus 96 VEidp~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvi 175 (262)
T PRK04457 96 VEINPQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVV 175 (262)
T ss_pred EECCHHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEE
Confidence 36677899999876 22 13456667532 33334689999975310 11111 113499999999999999998
Q ss_pred e
Q 009719 233 S 233 (527)
Q Consensus 233 S 233 (527)
-
T Consensus 176 n 176 (262)
T PRK04457 176 N 176 (262)
T ss_pred E
Confidence 5
|
|
| >PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=92.16 E-value=0.13 Score=59.29 Aligned_cols=93 Identities=18% Similarity=0.216 Sum_probs=57.8
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC---cEEeeccccC-CCCCCCcccEEEecC-ccc------
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP---AFVAMLGTRR-LPFPAFSFDIVHCSR-CLI------ 207 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p---a~~~v~dae~-LPFpD~SFDlV~cs~-~l~------ 207 (527)
+|.|+-++...|.. ++...|.++.+++.|++. |+. ..+..+|+.. |.-..++||+|++.- .+.
T Consensus 549 tG~~sl~aa~~Ga~--~V~~vD~s~~al~~a~~N~~~ng~~~~~v~~i~~D~~~~l~~~~~~fDlIilDPP~f~~~~~~~ 626 (702)
T PRK11783 549 TGTASVHAALGGAK--STTTVDMSNTYLEWAERNFALNGLSGRQHRLIQADCLAWLKEAREQFDLIFIDPPTFSNSKRME 626 (702)
T ss_pred CCHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHhCCCccceEEEEccHHHHHHHcCCCcCEEEECCCCCCCCCccc
Confidence 67777777776653 233348888888888754 443 4566677533 221157899999851 000
Q ss_pred c-c--ccChHHHHHHHhhcccCCcEEEEecCCC
Q 009719 208 P-F--TAYNATYLIEVDRLLRPGGYLVISGPPV 237 (527)
Q Consensus 208 h-w--~d~~~~aL~Ei~RVLRPGG~lviS~pp~ 237 (527)
. + ..+-..++..+.++|+|||.++++....
T Consensus 627 ~~~~~~~~y~~l~~~a~~lL~~gG~l~~~~~~~ 659 (702)
T PRK11783 627 DSFDVQRDHVALIKDAKRLLRPGGTLYFSNNKR 659 (702)
T ss_pred hhhhHHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 0 0 0111237788899999999999977543
|
|
| >PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A | Back alignment and domain information |
|---|
Probab=92.07 E-value=0.0093 Score=51.35 Aligned_cols=99 Identities=19% Similarity=0.244 Sum_probs=51.8
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhh----hccc-------cccccccCCCCCCCCCccchhhhcC
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIY----DRGL-------IGVYHDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~----eRGL-------iG~~hdwce~fstYPrtyDLiHa~~ 443 (527)
.|||.+||.|.|+.++...- .-++.=.+-. ..+.+.- ..|+ .|-+.+..+.++ ...||+|=++-
T Consensus 3 ~vlD~~~G~G~~~~~~~~~~--~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~~~--~~~~D~Iv~np 78 (117)
T PF13659_consen 3 RVLDPGCGSGTFLLAALRRG--AARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVGDARDLPEPLP--DGKFDLIVTNP 78 (117)
T ss_dssp EEEEETSTTCHHHHHHHHHC--TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEESHHHHHHHTCT--TT-EEEEEE--
T ss_pred EEEEcCcchHHHHHHHHHHC--CCeEEEEEECHHHHHHHHHHHHHccCCceEEEEECchhhchhhcc--CceeEEEEECC
Confidence 69999999999998886543 1122222211 1111111 0111 222223332332 37899998887
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEE
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVV 479 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~ii 479 (527)
-|........... =....++-++.|+|||||.+++
T Consensus 79 P~~~~~~~~~~~~-~~~~~~~~~~~~~L~~gG~~~~ 113 (117)
T PF13659_consen 79 PYGPRSGDKAALR-RLYSRFLEAAARLLKPGGVLVF 113 (117)
T ss_dssp STTSBTT----GG-CHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCccccccchhhH-HHHHHHHHHHHHHcCCCeEEEE
Confidence 7764320001111 1345778899999999999876
|
... |
| >PF03269 DUF268: Caenorhabditis protein of unknown function, DUF268; InterPro: IPR004951 This family consists of proteins of unknown function found in Caenorhabditis species | Back alignment and domain information |
|---|
Probab=92.06 E-value=0.099 Score=50.46 Aligned_cols=42 Identities=26% Similarity=0.431 Sum_probs=34.1
Q ss_pred CCcccEEEecCcccccc-----c---C--hHHHHHHHhhcccCCcEEEEecC
Q 009719 194 AFSFDIVHCSRCLIPFT-----A---Y--NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 194 D~SFDlV~cs~~l~hw~-----d---~--~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.++||.+.|..++.|.. | + +-.+++++.|||||||.|+++.|
T Consensus 61 ~~~fD~~as~~siEh~GLGRYGDPidp~Gdl~~m~~i~~vLK~GG~L~l~vP 112 (177)
T PF03269_consen 61 AGSFDFAASFSSIEHFGLGRYGDPIDPIGDLRAMAKIKCVLKPGGLLFLGVP 112 (177)
T ss_pred hccchhhheechhccccccccCCCCCccccHHHHHHHHHhhccCCeEEEEee
Confidence 47899999998888852 1 1 12489999999999999999998
|
|
| >COG1352 CheR Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=91.91 E-value=0.21 Score=51.48 Aligned_cols=43 Identities=28% Similarity=0.472 Sum_probs=37.5
Q ss_pred CCCcccEEEecCcccccccChH-HHHHHHhhcccCCcEEEEecC
Q 009719 193 PAFSFDIVHCSRCLIPFTAYNA-TYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 193 pD~SFDlV~cs~~l~hw~d~~~-~aL~Ei~RVLRPGG~lviS~p 235 (527)
..+-||+|.|--+++.+....+ .++..++..|+|||+|++...
T Consensus 199 ~~~~fD~IfCRNVLIYFd~~~q~~il~~f~~~L~~gG~LflG~s 242 (268)
T COG1352 199 FLGKFDLIFCRNVLIYFDEETQERILRRFADSLKPGGLLFLGHS 242 (268)
T ss_pred ccCCCCEEEEcceEEeeCHHHHHHHHHHHHHHhCCCCEEEEccC
Confidence 5577999999999999977654 599999999999999999654
|
|
| >PF01170 UPF0020: Putative RNA methylase family UPF0020; InterPro: IPR000241 This domain is probably a methylase | Back alignment and domain information |
|---|
Probab=91.72 E-value=0.35 Score=46.35 Aligned_cols=72 Identities=22% Similarity=0.354 Sum_probs=47.7
Q ss_pred eccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccCh----------HHHHHHHhhc
Q 009719 160 FAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN----------ATYLIEVDRL 223 (527)
Q Consensus 160 iAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~----------~~aL~Ei~RV 223 (527)
+...|..+.+++.|++. |+. +.+.+.|+..||+.+++||.|+|.- +|-... ..++.|+.||
T Consensus 64 ~~g~Di~~~~v~~a~~N~~~ag~~~~i~~~~~D~~~l~~~~~~~d~IvtnP---PyG~r~~~~~~~~~ly~~~~~~~~~~ 140 (179)
T PF01170_consen 64 IIGSDIDPKAVRGARENLKAAGVEDYIDFIQWDARELPLPDGSVDAIVTNP---PYGRRLGSKKDLEKLYRQFLRELKRV 140 (179)
T ss_dssp EEEEESSHHHHHHHHHHHHHTT-CGGEEEEE--GGGGGGTTSBSCEEEEE-----STTSHCHHHHHHHHHHHHHHHHHCH
T ss_pred EEecCCCHHHHHHHHHHHHhcccCCceEEEecchhhcccccCCCCEEEECc---chhhhccCHHHHHHHHHHHHHHHHHH
Confidence 33447777888777654 443 4567789999999999999999872 332211 1278999999
Q ss_pred ccCCcEEEEec
Q 009719 224 LRPGGYLVISG 234 (527)
Q Consensus 224 LRPGG~lviS~ 234 (527)
|+|...++++.
T Consensus 141 l~~~~v~l~~~ 151 (179)
T PF01170_consen 141 LKPRAVFLTTS 151 (179)
T ss_dssp STTCEEEEEES
T ss_pred CCCCEEEEEEC
Confidence 99955555554
|
It is associated with the THUMP domain that also occurs with RNA modification domains [].; PDB: 3LDU_A 3LDG_A 3K0B_A 3V8V_B 3V97_A 3TLJ_A 3TM5_B 3TM4_A 3TMA_A. |
| >TIGR00417 speE spermidine synthase | Back alignment and domain information |
|---|
Probab=91.71 E-value=0.35 Score=49.00 Aligned_cols=106 Identities=12% Similarity=0.181 Sum_probs=53.1
Q ss_pred cCCCCeeeEeecCCCccchhhhccCCC-eeEEEecCCCCC-CchhHhhhc-----c-c----cccc-cccCCCCCCCCCc
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSDP-VWVMNVVPARKS-STLSVIYDR-----G-L----IGVY-HDWCEPFSTYPRT 435 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~~-VwvMnvvp~~~~-ntl~vi~eR-----G-L----iG~~-hdwce~fstYPrt 435 (527)
+...+-++||++|||.|+++..+.+.+ +-- ++-++.. +.+..+-+. | + +-+. .|-.+-....+++
T Consensus 68 ~~~~~p~~VL~iG~G~G~~~~~ll~~~~~~~--v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~~~~ 145 (270)
T TIGR00417 68 FTHPNPKHVLVIGGGDGGVLREVLKHKSVEK--ATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADTENT 145 (270)
T ss_pred hcCCCCCEEEEEcCCchHHHHHHHhCCCcce--EEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhCCCC
Confidence 334455699999999999998876654 322 2222211 222222111 0 0 0011 1111111123678
Q ss_pred cchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 436 YDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 436 yDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
||+|=.+... .+. ....--....+-.+-|+|+|||.+++..
T Consensus 146 yDvIi~D~~~-~~~----~~~~l~~~ef~~~~~~~L~pgG~lv~~~ 186 (270)
T TIGR00417 146 FDVIIVDSTD-PVG----PAETLFTKEFYELLKKALNEDGIFVAQS 186 (270)
T ss_pred ccEEEEeCCC-CCC----cccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence 9998654321 111 0010001344557789999999999873
|
the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM. |
| >PLN02781 Probable caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=91.67 E-value=0.38 Score=47.97 Aligned_cols=67 Identities=19% Similarity=0.267 Sum_probs=42.3
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccC-CC-----CCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEE
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRR-LP-----FPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLV 231 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~-LP-----FpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lv 231 (527)
|.++..++.|++. |+. ..+..+++.. |+ .++++||+|++..-- .... .++.++.+.|||||.++
T Consensus 100 D~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L~~l~~~~~~~~fD~VfiDa~k---~~y~-~~~~~~~~ll~~GG~ii 175 (234)
T PLN02781 100 DIDKEAYEVGLEFIKKAGVDHKINFIQSDALSALDQLLNNDPKPEFDFAFVDADK---PNYV-HFHEQLLKLVKVGGIIA 175 (234)
T ss_pred ECCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHHhCCCCCCCCEEEECCCH---HHHH-HHHHHHHHhcCCCeEEE
Confidence 5555666666543 543 4455666533 33 235799999875321 1122 38899999999999998
Q ss_pred Eec
Q 009719 232 ISG 234 (527)
Q Consensus 232 iS~ 234 (527)
+..
T Consensus 176 ~dn 178 (234)
T PLN02781 176 FDN 178 (234)
T ss_pred EEc
Confidence 743
|
|
| >PLN02781 Probable caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=91.38 E-value=0.099 Score=52.15 Aligned_cols=133 Identities=14% Similarity=0.202 Sum_probs=68.1
Q ss_pred CCCeeeEeecCCCccc----hhhhccC-CCeeEEEecCCCCCCchhHhhhccc---cccc-cccCCCCCC----C-CCcc
Q 009719 371 TPAIRNIMDMNAFFGG----FAAALTS-DPVWVMNVVPARKSSTLSVIYDRGL---IGVY-HDWCEPFST----Y-PRTY 436 (527)
Q Consensus 371 ~~~iRnvmDm~ag~Gg----FaAaL~~-~~VwvMnvvp~~~~ntl~vi~eRGL---iG~~-hdwce~fst----Y-Prty 436 (527)
-..-++|+|+|||+|. +|+++.. -.|..+=.-|....-.-+.+-+-|+ |-+. .|..+.++. . ..+|
T Consensus 66 ~~~~~~vLEiGt~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L~~l~~~~~~~~f 145 (234)
T PLN02781 66 IMNAKNTLEIGVFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSDALSALDQLLNNDPKPEF 145 (234)
T ss_pred HhCCCEEEEecCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHHhCCCCCCC
Confidence 3456799999998885 3444432 2344443333211111112222343 1111 122222221 1 2589
Q ss_pred chhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-------------H----HHHHHHHHH----Hhc
Q 009719 437 DLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-------------P----EVIDKVSRI----ANT 495 (527)
Q Consensus 437 DLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-------------~----~~~~~i~~i----~~~ 495 (527)
|+|-.+.--..| ..++-++=|.|||||.+|+.+. . .....|+++ ...
T Consensus 146 D~VfiDa~k~~y------------~~~~~~~~~ll~~GG~ii~dn~l~~G~v~~~~~~~~~~~~~~~~~ir~~~~~i~~~ 213 (234)
T PLN02781 146 DFAFVDADKPNY------------VHFHEQLLKLVKVGGIIAFDNTLWFGFVAQEEDEVPEHMRAYRKALLEFNKLLASD 213 (234)
T ss_pred CEEEECCCHHHH------------HHHHHHHHHhcCCCeEEEEEcCCcCCeecCcccccchhhhHHHHHHHHHHHHHhhC
Confidence 998665322222 3456666799999999997531 0 122334443 444
Q ss_pred CCceeEEecCCCCCCCCceEEEEEec
Q 009719 496 VRWTAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 496 l~W~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
=+++..+... .+.+++++|.
T Consensus 214 ~~~~~~~lp~------gdG~~i~~k~ 233 (234)
T PLN02781 214 PRVEISQISI------GDGVTLCRRL 233 (234)
T ss_pred CCeEEEEEEe------CCccEEEEEe
Confidence 4666665532 3578888885
|
|
| >COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=91.33 E-value=0.35 Score=50.64 Aligned_cols=118 Identities=16% Similarity=0.209 Sum_probs=65.8
Q ss_pred CeeeEeecCCCccchhhhccCCC---eeEEEecCCCCCCchhHhhhc----cccccccccCCCCCCCC--CccchhhhcC
Q 009719 373 AIRNIMDMNAFFGGFAAALTSDP---VWVMNVVPARKSSTLSVIYDR----GLIGVYHDWCEPFSTYP--RTYDLIHVSG 443 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~~---VwvMnvvp~~~~ntl~vi~eR----GLiG~~hdwce~fstYP--rtyDLiHa~~ 443 (527)
.-+||+|.|||.|=+|=|..+.. |.-.-+=|. .+.+..|- |+--.-|.=+-.-.+.| +.||+|=|+=
T Consensus 162 ~g~~vlDvGcGSGILaIAa~kLGA~~v~g~DiDp~----AV~aa~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANI 237 (300)
T COG2264 162 KGKTVLDVGCGSGILAIAAAKLGAKKVVGVDIDPQ----AVEAARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANI 237 (300)
T ss_pred CCCEEEEecCChhHHHHHHHHcCCceEEEecCCHH----HHHHHHHHHHHcCCchhhhcccccchhhcccCcccEEEehh
Confidence 46899999999998876654433 332222221 12222111 11000000000112234 5899998852
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHH-HHHHHHHHHhcCCceeEEecCC
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPE-VIDKVSRIANTVRWTAAVHDKE 506 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~-~~~~i~~i~~~l~W~~~~~~~e 506 (527)
+..- +..+.=++-|.|+|||++|++.-.+ ..+.|.+.+.+--|++..+...
T Consensus 238 -LA~v-----------l~~La~~~~~~lkpgg~lIlSGIl~~q~~~V~~a~~~~gf~v~~~~~~ 289 (300)
T COG2264 238 -LAEV-----------LVELAPDIKRLLKPGGRLILSGILEDQAESVAEAYEQAGFEVVEVLER 289 (300)
T ss_pred -hHHH-----------HHHHHHHHHHHcCCCceEEEEeehHhHHHHHHHHHHhCCCeEeEEEec
Confidence 2211 1234446789999999999998433 4667777787778887766433
|
|
| >TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB | Back alignment and domain information |
|---|
Probab=91.22 E-value=0.14 Score=55.26 Aligned_cols=20 Identities=20% Similarity=0.371 Sum_probs=18.0
Q ss_pred cccceeecccccCCcEEEEe
Q 009719 461 VDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 461 ~~illEmDRILRP~G~~iir 480 (527)
..+|-++=|+|||||.+|++
T Consensus 348 ~~lL~~a~~~LkpgG~lvys 367 (426)
T TIGR00563 348 SEILDAIWPLLKTGGTLVYA 367 (426)
T ss_pred HHHHHHHHHhcCCCcEEEEE
Confidence 36888899999999999998
|
The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles. |
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=91.16 E-value=0.069 Score=54.20 Aligned_cols=93 Identities=14% Similarity=0.231 Sum_probs=65.3
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcccc-ccccccCCCCCC----CC-CccchhhhcCccccc
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGLI-GVYHDWCEPFST----YP-RTYDLIHVSGIESLI 448 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGLi-G~~hdwce~fst----YP-rtyDLiHa~~~fs~~ 448 (527)
.|||+|||-|.++-.|.... -+|.-.|.. .-++++-.+.+. |+.-||... .+ -. -+||.|=|..+..+.
T Consensus 62 ~vLDvGCGgG~Lse~mAr~G---a~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~-~~edl~~~~~~FDvV~cmEVlEHv 137 (243)
T COG2227 62 RVLDVGCGGGILSEPLARLG---ASVTGIDASEKPIEVAKLHALESGVNIDYRQA-TVEDLASAGGQFDVVTCMEVLEHV 137 (243)
T ss_pred eEEEecCCccHhhHHHHHCC---CeeEEecCChHHHHHHHHhhhhccccccchhh-hHHHHHhcCCCccEEEEhhHHHcc
Confidence 49999999999999998877 456666655 556666544442 333333211 11 11 478888888888776
Q ss_pred cCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 449 KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 449 ~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
. +...++-+..+.|||||-++++.
T Consensus 138 ~---------dp~~~~~~c~~lvkP~G~lf~ST 161 (243)
T COG2227 138 P---------DPESFLRACAKLVKPGGILFLST 161 (243)
T ss_pred C---------CHHHHHHHHHHHcCCCcEEEEec
Confidence 4 23569999999999999999996
|
|
| >PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences | Back alignment and domain information |
|---|
Probab=91.13 E-value=0.23 Score=51.72 Aligned_cols=93 Identities=18% Similarity=0.307 Sum_probs=53.1
Q ss_pred CCeeEEeeccCcChHHHHHHHH----HcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCc
Q 009719 153 ENILTLSFAPRDSHKAQIQFAL----ERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGG 228 (527)
Q Consensus 153 r~V~~msiAp~D~seaqvq~A~----eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG 228 (527)
+.|.++++.| ..++.|+ ..++...+.+.. ...+....||+|+++-.. + .....+.++.++|+|||
T Consensus 185 ~~v~a~DiDp-----~Av~~a~~N~~~N~~~~~~~v~~--~~~~~~~~~dlvvANI~~-~---vL~~l~~~~~~~l~~~G 253 (295)
T PF06325_consen 185 KKVVAIDIDP-----LAVEAARENAELNGVEDRIEVSL--SEDLVEGKFDLVVANILA-D---VLLELAPDIASLLKPGG 253 (295)
T ss_dssp SEEEEEESSC-----HHHHHHHHHHHHTT-TTCEEESC--TSCTCCS-EEEEEEES-H-H---HHHHHHHHCHHHEEEEE
T ss_pred CeEEEecCCH-----HHHHHHHHHHHHcCCCeeEEEEE--ecccccccCCEEEECCCH-H---HHHHHHHHHHHhhCCCC
Confidence 3466666644 3344443 446655543332 233446999999988543 1 12237788999999999
Q ss_pred EEEEecCCCCCCCchhHHHHHHHHHHhcceEEeee
Q 009719 229 YLVISGPPVQWPKQDKEWADLQAVARALCYELIAV 263 (527)
Q Consensus 229 ~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~ 263 (527)
+|++|+--. .....+.+..+. -|++...
T Consensus 254 ~lIlSGIl~------~~~~~v~~a~~~-g~~~~~~ 281 (295)
T PF06325_consen 254 YLILSGILE------EQEDEVIEAYKQ-GFELVEE 281 (295)
T ss_dssp EEEEEEEEG------GGHHHHHHHHHT-TEEEEEE
T ss_pred EEEEccccH------HHHHHHHHHHHC-CCEEEEE
Confidence 999999511 123344444454 5665443
|
Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A .... |
| >KOG1540 consensus Ubiquinone biosynthesis methyltransferase COQ5 [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.11 E-value=0.18 Score=52.05 Aligned_cols=96 Identities=18% Similarity=0.257 Sum_probs=59.0
Q ss_pred CCeeeEeecCCCccchhhhcc----C------CCeeEEEecCCCCCCchhHhhhcccc-ccccc----cC----CCCCCC
Q 009719 372 PAIRNIMDMNAFFGGFAAALT----S------DPVWVMNVVPARKSSTLSVIYDRGLI-GVYHD----WC----EPFSTY 432 (527)
Q Consensus 372 ~~iRnvmDm~ag~GgFaAaL~----~------~~VwvMnvvp~~~~ntl~vi~eRGLi-G~~hd----wc----e~fstY 432 (527)
+.-=++|||.+|+|--|=.+. + ..|.|.-+ .|++|.+.-.|-.= |..-+ |- |.++ |
T Consensus 99 ~~~m~~lDvaGGTGDiaFril~~v~s~~~~~~~~V~v~Di----np~mL~vgkqRa~~~~l~~~~~~~w~~~dAE~Lp-F 173 (296)
T KOG1540|consen 99 GKGMKVLDVAGGTGDIAFRILRHVKSQFGDRESKVTVLDI----NPHMLAVGKQRAKKRPLKASSRVEWVEGDAEDLP-F 173 (296)
T ss_pred CCCCeEEEecCCcchhHHHHHHhhccccCCCCceEEEEeC----CHHHHHHHHHHHhhcCCCcCCceEEEeCCcccCC-C
Confidence 444689999999985443332 1 33444332 34777777666531 11111 22 4455 5
Q ss_pred C-CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 433 P-RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 433 P-rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
| .+||+.-.+.-.-.+. .+...|=|+-|+|.|||-|.+=+
T Consensus 174 dd~s~D~yTiafGIRN~t---------h~~k~l~EAYRVLKpGGrf~cLe 214 (296)
T KOG1540|consen 174 DDDSFDAYTIAFGIRNVT---------HIQKALREAYRVLKPGGRFSCLE 214 (296)
T ss_pred CCCcceeEEEecceecCC---------CHHHHHHHHHHhcCCCcEEEEEE
Confidence 6 8999866543222222 36789999999999999887765
|
|
| >PRK00811 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=91.03 E-value=0.34 Score=49.67 Aligned_cols=107 Identities=14% Similarity=0.191 Sum_probs=55.4
Q ss_pred ccCCCCeeeEeecCCCccchhhhccCC-CeeEEEecCCCCCCchhHhhhc------cc-----ccc-ccccCCCCCCCCC
Q 009719 368 KLGTPAIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKSSTLSVIYDR------GL-----IGV-YHDWCEPFSTYPR 434 (527)
Q Consensus 368 ~i~~~~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~ntl~vi~eR------GL-----iG~-~hdwce~fstYPr 434 (527)
++....-++|||+|||.|+++..+.+. ++--+-+|=.+. ..+.++-+. |+ +-+ ..|-.+-+.+-+.
T Consensus 71 ~~~~~~p~~VL~iG~G~G~~~~~~l~~~~~~~V~~VEid~-~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~ 149 (283)
T PRK00811 71 LFAHPNPKRVLIIGGGDGGTLREVLKHPSVEKITLVEIDE-RVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAETEN 149 (283)
T ss_pred HhhCCCCCEEEEEecCchHHHHHHHcCCCCCEEEEEeCCH-HHHHHHHHHhHHhccccccCCceEEEECchHHHHhhCCC
Confidence 344455789999999999999988776 443222221221 222222111 11 000 1111111122246
Q ss_pred ccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 435 TYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 435 tyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
+||+|=++ ++..+. ....---..++-++-|+|+|||.+++.
T Consensus 150 ~yDvIi~D-~~dp~~----~~~~l~t~ef~~~~~~~L~~gGvlv~~ 190 (283)
T PRK00811 150 SFDVIIVD-STDPVG----PAEGLFTKEFYENCKRALKEDGIFVAQ 190 (283)
T ss_pred cccEEEEC-CCCCCC----chhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 89998654 222221 000000134566789999999999996
|
|
| >PRK13255 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=91.02 E-value=0.14 Score=50.74 Aligned_cols=95 Identities=9% Similarity=-0.006 Sum_probs=54.1
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCCCCchh-Hhhhcccccccc--------------ccCCCCCCC---C-Ccc
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLS-VIYDRGLIGVYH--------------DWCEPFSTY---P-RTY 436 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~ntl~-vi~eRGLiG~~h--------------dwce~fstY---P-rty 436 (527)
.|||.|||.|--|.+|.++..=|.-|=.+. .-+. +.-++|+..... -++.-|-.+ + .+|
T Consensus 40 rvL~~gCG~G~da~~LA~~G~~V~avD~s~--~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~~~~~~f 117 (218)
T PRK13255 40 RVLVPLCGKSLDMLWLAEQGHEVLGVELSE--LAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTAADLADV 117 (218)
T ss_pred eEEEeCCCChHhHHHHHhCCCeEEEEccCH--HHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCcccCCCe
Confidence 899999999999999998876443332221 2122 234666643211 122212111 1 255
Q ss_pred chhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEE
Q 009719 437 DLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVV 479 (527)
Q Consensus 437 DLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~ii 479 (527)
|+|-...+|.... ...-..++-.|-++|+|||.+++
T Consensus 118 d~v~D~~~~~~l~-------~~~R~~~~~~l~~lL~pgG~~~l 153 (218)
T PRK13255 118 DAVYDRAALIALP-------EEMRERYVQQLAALLPAGCRGLL 153 (218)
T ss_pred eEEEehHhHhhCC-------HHHHHHHHHHHHHHcCCCCeEEE
Confidence 6655544444331 11125678899999999996444
|
|
| >PF01234 NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: IPR000940 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=90.93 E-value=0.24 Score=50.64 Aligned_cols=39 Identities=36% Similarity=0.559 Sum_probs=32.7
Q ss_pred cccEEEecCcccccccChH---HHHHHHhhcccCCcEEEEec
Q 009719 196 SFDIVHCSRCLIPFTAYNA---TYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 196 SFDlV~cs~~l~hw~d~~~---~aL~Ei~RVLRPGG~lviS~ 234 (527)
.||+|++++|+.--..+.. .+++.+.+.|||||+|++.+
T Consensus 158 ~~D~v~s~fcLE~a~~d~~~y~~al~ni~~lLkpGG~Lil~~ 199 (256)
T PF01234_consen 158 KFDCVISSFCLESACKDLDEYRRALRNISSLLKPGGHLILAG 199 (256)
T ss_dssp SEEEEEEESSHHHH-SSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred chhhhhhhHHHHHHcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 5999999999977665543 49999999999999999965
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. Several cytoplasmic vertebrate methyltransferases are evolutionary related [], including nicotinamide N-methyltransferase (2.1.1.1 from EC) (NNMT); phenylethanolamine N-methyltransferase (2.1.1.28 from EC) (PNMT); and thioether S-methyltransferase (2.1.1.96 from EC) (TEMT). NNMT catalyzes the N-methylation of nicotinamide and other pyridines to form pyridinium ions. This activity is important for the biotransformation of many drugs and xenobiotic compounds. PNMT catalyzes the last step in catecholamine biosynthesis, the conversion of noradrenalin to adrenalin; and TEMT catalyzes the methylation of dimethyl sulphide into trimethylsulphonium. These three enzymes use S-adenosyl-L-methionine as the methyl donor. They are proteins of 30 to 32 kDa.; GO: 0008168 methyltransferase activity; PDB: 2IIP_C 3ROD_A 2OBF_A 3HCA_B 2ONY_B 3KR1_A 2OPB_B 3KQP_B 2AN4_B 3KQM_A .... |
| >PRK14902 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=90.86 E-value=0.54 Score=51.03 Aligned_cols=104 Identities=18% Similarity=0.244 Sum_probs=53.3
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCC-CchhHhhh----ccccc---cccccCCCCCCCCCccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKS-STLSVIYD----RGLIG---VYHDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~-ntl~vi~e----RGLiG---~~hdwce~fstYPrtyDLiHa~~ 443 (527)
.+|+|||||.|+++.++.+. +--|+ -.|-. +.+..+-+ .|+-. +-.|..+....++.+||+|=++-
T Consensus 252 ~~VLDlgaG~G~~t~~la~~~~~~~~v~---avDi~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~~~~~~~~fD~Vl~D~ 328 (444)
T PRK14902 252 DTVLDACAAPGGKTTHIAELLKNTGKVV---ALDIHEHKLKLIEENAKRLGLTNIETKALDARKVHEKFAEKFDKILVDA 328 (444)
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEE---EEeCCHHHHHHHHHHHHHcCCCeEEEEeCCcccccchhcccCCEEEEcC
Confidence 57999999999998777542 22222 22222 33333322 24311 22333332223457899875432
Q ss_pred ccccc----cCCCCC--CCCCcc-------cccceeecccccCCcEEEEeC
Q 009719 444 IESLI----KNPGSN--KNSCSL-------VDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 444 ~fs~~----~~~~~~--~~rC~~-------~~illEmDRILRP~G~~iird 481 (527)
-.|.. ..|... ...-.+ ..+|-+.=|+|+|||.+|+..
T Consensus 329 Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvyst 379 (444)
T PRK14902 329 PCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKGGILVYST 379 (444)
T ss_pred CCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEc
Confidence 11100 000000 000111 247888889999999999863
|
|
| >COG1092 Predicted SAM-dependent methyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.75 E-value=0.35 Score=52.38 Aligned_cols=94 Identities=20% Similarity=0.148 Sum_probs=64.2
Q ss_pred hhccccccccCCe-eEEeeccCcChHHHHHHHHHc----CCC---cEEeeccc-cCCCCCCC---cccEEEec---C---
Q 009719 143 VASFGGSMLSENI-LTLSFAPRDSHKAQIQFALER----GIP---AFVAMLGT-RRLPFPAF---SFDIVHCS---R--- 204 (527)
Q Consensus 143 vgsfga~Ll~r~V-~~msiAp~D~seaqvq~A~eR----g~p---a~~~v~da-e~LPFpD~---SFDlV~cs---~--- 204 (527)
+|+|+-+....|+ .++++ |.|..-++.|++. |+. ..+.++|+ +-|....+ .||+|+.. +
T Consensus 228 TGgfSv~Aa~gGA~~vt~V---D~S~~al~~a~~N~~LNg~~~~~~~~i~~Dvf~~l~~~~~~g~~fDlIilDPPsF~r~ 304 (393)
T COG1092 228 TGGFSVHAALGGASEVTSV---DLSKRALEWARENAELNGLDGDRHRFIVGDVFKWLRKAERRGEKFDLIILDPPSFARS 304 (393)
T ss_pred CcHHHHHHHhcCCCceEEE---eccHHHHHHHHHHHHhcCCCccceeeehhhHHHHHHHHHhcCCcccEEEECCcccccC
Confidence 7888888888888 66666 7888888888765 443 46777785 33454434 99999964 1
Q ss_pred --cccccccChHHHHHHHhhcccCCcEEEEecCCCCC
Q 009719 205 --CLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQW 239 (527)
Q Consensus 205 --~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp~~~ 239 (527)
.......+-...+.+..++|+|||.+++|+.....
T Consensus 305 k~~~~~~~rdy~~l~~~~~~iL~pgG~l~~~s~~~~~ 341 (393)
T COG1092 305 KKQEFSAQRDYKDLNDLALRLLAPGGTLVTSSCSRHF 341 (393)
T ss_pred cccchhHHHHHHHHHHHHHHHcCCCCEEEEEecCCcc
Confidence 11010111123888999999999999999864443
|
|
| >PLN02366 spermidine synthase | Back alignment and domain information |
|---|
Probab=90.50 E-value=0.94 Score=47.40 Aligned_cols=70 Identities=19% Similarity=0.242 Sum_probs=45.2
Q ss_pred cChHHHHHHHHHcC------C---CcEEeeccccC-C-CCCCCcccEEEecCcccccccCh----HHHHHHHhhcccCCc
Q 009719 164 DSHKAQIQFALERG------I---PAFVAMLGTRR-L-PFPAFSFDIVHCSRCLIPFTAYN----ATYLIEVDRLLRPGG 228 (527)
Q Consensus 164 D~seaqvq~A~eRg------~---pa~~~v~dae~-L-PFpD~SFDlV~cs~~l~hw~d~~----~~aL~Ei~RVLRPGG 228 (527)
|+.+.+++.|++.- . ...+..+|+.. | ..+++.||+|++... .++.... ..+++.+.|.|+|||
T Consensus 122 EiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDvIi~D~~-dp~~~~~~L~t~ef~~~~~~~L~pgG 200 (308)
T PLN02366 122 EIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDAIIVDSS-DPVGPAQELFEKPFFESVARALRPGG 200 (308)
T ss_pred ECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCEEEEcCC-CCCCchhhhhHHHHHHHHHHhcCCCc
Confidence 55678888887642 1 23455566522 1 124678999998643 3332221 237999999999999
Q ss_pred EEEEec
Q 009719 229 YLVISG 234 (527)
Q Consensus 229 ~lviS~ 234 (527)
.++.-.
T Consensus 201 vlv~q~ 206 (308)
T PLN02366 201 VVCTQA 206 (308)
T ss_pred EEEECc
Confidence 998744
|
|
| >PRK11524 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=90.17 E-value=0.18 Score=51.51 Aligned_cols=55 Identities=15% Similarity=0.222 Sum_probs=35.9
Q ss_pred EEeeccccCC--CCCCCcccEEEec--Ccc--------cccc-----cChHHHHHHHhhcccCCcEEEEecC
Q 009719 181 FVAMLGTRRL--PFPAFSFDIVHCS--RCL--------IPFT-----AYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 181 ~~~v~dae~L--PFpD~SFDlV~cs--~~l--------~hw~-----d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+..+|+..+ .+++++||+|+++ +.. ..|. +.....|.|+.|||||||.+++...
T Consensus 10 ~i~~gD~~~~l~~l~~~siDlIitDPPY~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~rvLK~~G~i~i~~~ 81 (284)
T PRK11524 10 TIIHGDALTELKKIPSESVDLIFADPPYNIGKNFDGLIEAWKEDLFIDWLYEWIDECHRVLKKQGTMYIMNS 81 (284)
T ss_pred EEEeccHHHHHHhcccCcccEEEECCCcccccccccccccccHHHHHHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 3445565443 4678999999985 211 0111 1112388999999999999998754
|
|
| >PRK03612 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=90.05 E-value=0.91 Score=50.63 Aligned_cols=74 Identities=20% Similarity=0.147 Sum_probs=49.4
Q ss_pred ccCcChHHHHHHHHHcC------------CCcEEeeccccC-CCCCCCcccEEEecCcccccccC-----hHHHHHHHhh
Q 009719 161 APRDSHKAQIQFALERG------------IPAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAY-----NATYLIEVDR 222 (527)
Q Consensus 161 Ap~D~seaqvq~A~eRg------------~pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~-----~~~aL~Ei~R 222 (527)
...|.++++++.|++.. -...+..+|+.. +...+++||+|++... .++... ...+++++.|
T Consensus 325 ~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~Da~~~l~~~~~~fDvIi~D~~-~~~~~~~~~L~t~ef~~~~~~ 403 (521)
T PRK03612 325 TLVDLDPAMTELARTSPALRALNGGALDDPRVTVVNDDAFNWLRKLAEKFDVIIVDLP-DPSNPALGKLYSVEFYRLLKR 403 (521)
T ss_pred EEEECCHHHHHHHHhCCcchhhhccccCCCceEEEEChHHHHHHhCCCCCCEEEEeCC-CCCCcchhccchHHHHHHHHH
Confidence 33466789999998731 123456677654 4444679999998743 233111 1137899999
Q ss_pred cccCCcEEEEecC
Q 009719 223 LLRPGGYLVISGP 235 (527)
Q Consensus 223 VLRPGG~lviS~p 235 (527)
.|||||.+++...
T Consensus 404 ~L~pgG~lv~~~~ 416 (521)
T PRK03612 404 RLAPDGLLVVQST 416 (521)
T ss_pred hcCCCeEEEEecC
Confidence 9999999999654
|
|
| >PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A | Back alignment and domain information |
|---|
Probab=89.86 E-value=0.011 Score=50.33 Aligned_cols=92 Identities=22% Similarity=0.242 Sum_probs=52.5
Q ss_pred EeecCCCccchhhhccCCC--eeEEEecCCCCC-CchhHhhhcc----c-cccccccCCCCCCCCCccchhhhcCc-ccc
Q 009719 377 IMDMNAFFGGFAAALTSDP--VWVMNVVPARKS-STLSVIYDRG----L-IGVYHDWCEPFSTYPRTYDLIHVSGI-ESL 447 (527)
Q Consensus 377 vmDm~ag~GgFaAaL~~~~--VwvMnvvp~~~~-ntl~vi~eRG----L-iG~~hdwce~fstYPrtyDLiHa~~~-fs~ 447 (527)
|||+|||.|.+..+|.+.- ---..+.-.|-. +.|..+.++. + +=.++.=.+.++..-.+||+|=++++ |..
T Consensus 1 ILDlgcG~G~~~~~l~~~~~~~~~~~~~gvD~s~~~l~~~~~~~~~~~~~~~~~~~D~~~l~~~~~~~D~v~~~~~~~~~ 80 (101)
T PF13649_consen 1 ILDLGCGTGRVTRALARRFDAGPSSRVIGVDISPEMLELAKKRFSEDGPKVRFVQADARDLPFSDGKFDLVVCSGLSLHH 80 (101)
T ss_dssp -EEET-TTSHHHHHHHHHS-----SEEEEEES-HHHHHHHHHHSHHTTTTSEEEESCTTCHHHHSSSEEEEEE-TTGGGG
T ss_pred CEEeecCCcHHHHHHHHHhhhcccceEEEEECCHHHHHHHHHhchhcCCceEEEECCHhHCcccCCCeeEEEEcCCccCC
Confidence 7999999999998886431 000233334433 5666666655 2 11111111222222369999999766 554
Q ss_pred ccCCCCCCCCCcccccceeecccccCCc
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEG 475 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G 475 (527)
. ..=.++.++=+|=|+|||||
T Consensus 81 ~-------~~~~~~~ll~~~~~~l~pgG 101 (101)
T PF13649_consen 81 L-------SPEELEALLRRIARLLRPGG 101 (101)
T ss_dssp S-------SHHHHHHHHHHHHHTEEEEE
T ss_pred C-------CHHHHHHHHHHHHHHhCCCC
Confidence 3 23346789999999999998
|
|
| >COG2813 RsmC 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=89.73 E-value=1.9 Score=45.30 Aligned_cols=120 Identities=16% Similarity=0.192 Sum_probs=70.9
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCccccccc----ChHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA----YNAT 215 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d----~~~~ 215 (527)
|-.|..|..++- ...++..|.+..-|+.|++. ++.......+..-.+-.+ .||+|+|.==+|.=.+ -...
T Consensus 170 Gvlg~~la~~~p-~~~vtmvDvn~~Av~~ar~Nl~~N~~~~~~v~~s~~~~~v~~-kfd~IisNPPfh~G~~v~~~~~~~ 247 (300)
T COG2813 170 GVLGLVLAKKSP-QAKLTLVDVNARAVESARKNLAANGVENTEVWASNLYEPVEG-KFDLIISNPPFHAGKAVVHSLAQE 247 (300)
T ss_pred cHHHHHHHHhCC-CCeEEEEecCHHHHHHHHHhHHHcCCCccEEEEecccccccc-cccEEEeCCCccCCcchhHHHHHH
Confidence 333444444443 23455568888888888754 444422333444556666 9999999843321011 1114
Q ss_pred HHHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeeeecceEEEeC
Q 009719 216 YLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKK 272 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~~~~v~iwrK 272 (527)
.+.+..+.|++||.|.+-.. ...++. ..|+++.. .-+.+.+.+...||+-
T Consensus 248 ~i~~A~~~L~~gGeL~iVan---~~l~y~--~~L~~~Fg--~v~~la~~~gf~Vl~a 297 (300)
T COG2813 248 IIAAAARHLKPGGELWIVAN---RHLPYE--KKLKELFG--NVEVLAKNGGFKVLRA 297 (300)
T ss_pred HHHHHHHhhccCCEEEEEEc---CCCChH--HHHHHhcC--CEEEEEeCCCEEEEEE
Confidence 78899999999999999764 111222 23444433 2577888888888874
|
|
| >PLN03075 nicotianamine synthase; Provisional | Back alignment and domain information |
|---|
Probab=89.71 E-value=0.3 Score=50.97 Aligned_cols=140 Identities=9% Similarity=0.043 Sum_probs=75.0
Q ss_pred CeeeEeecCCCccchhhhccC----CCeeEEEecCCCCC-CchhHhh--hccccc----cccccCCCCCCCCCccchhhh
Q 009719 373 AIRNIMDMNAFFGGFAAALTS----DPVWVMNVVPARKS-STLSVIY--DRGLIG----VYHDWCEPFSTYPRTYDLIHV 441 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~----~~VwvMnvvp~~~~-ntl~vi~--eRGLiG----~~hdwce~fstYPrtyDLiHa 441 (527)
.-+.|+|+|||-|++.|.+.- ...-+.|+--.... +.-.-.+ +.||=. ..+|--+.. .-...||+|=+
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~-~~l~~FDlVF~ 201 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVT-ESLKEYDVVFL 201 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcc-cccCCcCEEEE
Confidence 568999999998877554322 23334344322111 1111112 234311 112222211 11267999998
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC---HHHHHHHHHHHhcCCceeEEecCCCCCCCCceEEEE
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS---PEVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVA 518 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~---~~~~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiLi~ 518 (527)
. .+..+. +=.-..+|-.+=|.|||||++++|.- ...+..+-....-=.|++...-|-.++ .-.-++|+
T Consensus 202 ~-ALi~~d-------k~~k~~vL~~l~~~LkPGG~Lvlr~~~G~r~~LYp~v~~~~~~gf~~~~~~~P~~~-v~Nsvi~~ 272 (296)
T PLN03075 202 A-ALVGMD-------KEEKVKVIEHLGKHMAPGALLMLRSAHGARAFLYPVVDPCDLRGFEVLSVFHPTDE-VINSVIIA 272 (296)
T ss_pred e-cccccc-------cccHHHHHHHHHHhcCCCcEEEEecccchHhhcCCCCChhhCCCeEEEEEECCCCC-ceeeEEEE
Confidence 8 554442 11126788899999999999999952 222222111111117887655444333 56789999
Q ss_pred Eecc
Q 009719 519 TKSL 522 (527)
Q Consensus 519 ~K~~ 522 (527)
+|.-
T Consensus 273 r~~~ 276 (296)
T PLN03075 273 RKPG 276 (296)
T ss_pred Eeec
Confidence 9964
|
|
| >PF05891 Methyltransf_PK: AdoMet dependent proline di-methyltransferase; InterPro: IPR008576 This family consists of several eukaryotic proteins of unknown function that are S-adenosyl-L-methionine-dependent methyltransferase-like | Back alignment and domain information |
|---|
Probab=89.24 E-value=0.57 Score=47.04 Aligned_cols=86 Identities=15% Similarity=0.205 Sum_probs=52.7
Q ss_pred ccccccCCeeEEeeccCcChHHHHHHHHHcCCC-----cEEeeccccCCCCCCCcccEEEecCcccccccChH-HHHHHH
Q 009719 147 GGSMLSENILTLSFAPRDSHKAQIQFALERGIP-----AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA-TYLIEV 220 (527)
Q Consensus 147 ga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~p-----a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~-~aL~Ei 220 (527)
+..||-.-...+++. +..+.-++.|++.-.. ..+...+.+..--+.+.+|+|+|..|+.|.+|.+- .+|+-.
T Consensus 70 Tk~lLl~~f~~VDlV--Ep~~~Fl~~a~~~l~~~~~~v~~~~~~gLQ~f~P~~~~YDlIW~QW~lghLTD~dlv~fL~RC 147 (218)
T PF05891_consen 70 TKGLLLPVFDEVDLV--EPVEKFLEQAKEYLGKDNPRVGEFYCVGLQDFTPEEGKYDLIWIQWCLGHLTDEDLVAFLKRC 147 (218)
T ss_dssp HHHTCCCC-SEEEEE--ES-HHHHHHHHHHTCCGGCCEEEEEES-GGG----TT-EEEEEEES-GGGS-HHHHHHHHHHH
T ss_pred HHHHHHHhcCEeEEe--ccCHHHHHHHHHHhcccCCCcceEEecCHhhccCCCCcEeEEEehHhhccCCHHHHHHHHHHH
Confidence 334544434445543 4456778888754222 23333444444333579999999999999998774 499999
Q ss_pred hhcccCCcEEEEec
Q 009719 221 DRLLRPGGYLVISG 234 (527)
Q Consensus 221 ~RVLRPGG~lviS~ 234 (527)
...|+|||.+++-.
T Consensus 148 k~~L~~~G~IvvKE 161 (218)
T PF05891_consen 148 KQALKPNGVIVVKE 161 (218)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHhCcCCcEEEEEe
Confidence 99999999999844
|
; GO: 0008168 methyltransferase activity; PDB: 1XTP_A 2EX4_B. |
| >COG4123 Predicted O-methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.77 E-value=0.81 Score=46.76 Aligned_cols=128 Identities=14% Similarity=0.229 Sum_probs=78.3
Q ss_pred CCeeeEeecCCCccchhhhccCC-C-eeEE--EecCCCCC-C--chhH--hhhccc--cccccccCCCCCCCCCccchhh
Q 009719 372 PAIRNIMDMNAFFGGFAAALTSD-P-VWVM--NVVPARKS-S--TLSV--IYDRGL--IGVYHDWCEPFSTYPRTYDLIH 440 (527)
Q Consensus 372 ~~iRnvmDm~ag~GgFaAaL~~~-~-VwvM--nvvp~~~~-n--tl~v--i~eRGL--iG~~hdwce~fstYPrtyDLiH 440 (527)
.....|+|+|||.|.-+=+|..+ + +=+. -+-+.... . +++. .-||-= =+=+.+|..++.. .+||+|=
T Consensus 43 ~~~~~IlDlGaG~G~l~L~la~r~~~a~I~~VEiq~~~a~~A~~nv~ln~l~~ri~v~~~Di~~~~~~~~~--~~fD~Ii 120 (248)
T COG4123 43 PKKGRILDLGAGNGALGLLLAQRTEKAKIVGVEIQEEAAEMAQRNVALNPLEERIQVIEADIKEFLKALVF--ASFDLII 120 (248)
T ss_pred ccCCeEEEecCCcCHHHHHHhccCCCCcEEEEEeCHHHHHHHHHHHHhCcchhceeEehhhHHHhhhcccc--cccCEEE
Confidence 34889999999999776666555 2 3222 22211110 0 1111 112210 1333445555432 3699988
Q ss_pred hcCcccccc---------CCCCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCceeE
Q 009719 441 VSGIESLIK---------NPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAA 501 (527)
Q Consensus 441 a~~~fs~~~---------~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~~ 501 (527)
|+==|-.-. ..+...-.|++++++-=-=++|+|||++.+=-..+-+.+|-+++++++|+..
T Consensus 121 ~NPPyf~~~~~~~~~~~~~~Ar~e~~~~le~~i~~a~~~lk~~G~l~~V~r~erl~ei~~~l~~~~~~~k 190 (248)
T COG4123 121 CNPPYFKQGSRLNENPLRAIARHEITLDLEDLIRAAAKLLKPGGRLAFVHRPERLAEIIELLKSYNLEPK 190 (248)
T ss_pred eCCCCCCCccccCcChhhhhhhhhhcCCHHHHHHHHHHHccCCCEEEEEecHHHHHHHHHHHHhcCCCce
Confidence 875543211 0001123477778877788999999999999999999999999999999975
|
|
| >PF05185 PRMT5: PRMT5 arginine-N-methyltransferase; InterPro: IPR007857 The human homologue of Saccharomyces cerevisiae Skb1 (Shk1 kinase-binding protein 1) is a protein methyltransferase [] | Back alignment and domain information |
|---|
Probab=88.29 E-value=0.37 Score=52.92 Aligned_cols=129 Identities=22% Similarity=0.304 Sum_probs=61.0
Q ss_pred ccCccccchhhHHHH---HHHHHHHHHhhhccCCCC----eeeEeecCCCccchh------hhccCCCeeEEEecCCC-C
Q 009719 341 KNGYDVFEADSRRWR---RRVAYYKNTLNVKLGTPA----IRNIMDMNAFFGGFA------AALTSDPVWVMNVVPAR-K 406 (527)
Q Consensus 341 g~~~~~f~~d~~~W~---~~v~~Y~~~l~~~i~~~~----iRnvmDm~ag~GgFa------AaL~~~~VwvMnvvp~~-~ 406 (527)
..+-|.|+.|..+.. +.+... |.......+ --+|||+|||.|-.+ ++-....+=|-.|--.. +
T Consensus 150 s~tYe~fE~D~vKY~~Ye~AI~~a---l~D~~~~~~~~~~~~vVldVGAGrGpL~~~al~A~~~~~~a~~VyAVEkn~~A 226 (448)
T PF05185_consen 150 SQTYEVFEKDPVKYDQYERAIEEA---LKDRVRKNSYSSKDKVVLDVGAGRGPLSMFALQAGARAGGAVKVYAVEKNPNA 226 (448)
T ss_dssp HHHHHHHCC-HHHHHHHHHHHHHH---HHHHHTTS-SEETT-EEEEES-TTSHHHHHHHHTTHHHCCESEEEEEESSTHH
T ss_pred cccHhhHhcCHHHHHHHHHHHHHH---HHhhhhhccccccceEEEEeCCCccHHHHHHHHHHHHhCCCeEEEEEcCCHhH
Confidence 346799999986553 333222 222334443 356999999999884 22223334443332111 1
Q ss_pred CCchh-Hhhhccc---cccccccCCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 407 SSTLS-VIYDRGL---IGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 407 ~ntl~-vi~eRGL---iG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
--+|+ .|-+.|+ |=++|.==+.+.. |--.|+ +.|-|.+ +-...-.+..+|.-.||.|+|+|..|=+
T Consensus 227 ~~~l~~~v~~n~w~~~V~vi~~d~r~v~l-pekvDI-----IVSElLG--sfg~nEl~pE~Lda~~rfLkp~Gi~IP~ 296 (448)
T PF05185_consen 227 VVTLQKRVNANGWGDKVTVIHGDMREVEL-PEKVDI-----IVSELLG--SFGDNELSPECLDAADRFLKPDGIMIPS 296 (448)
T ss_dssp HHHHHHHHHHTTTTTTEEEEES-TTTSCH-SS-EEE-----EEE---B--TTBTTTSHHHHHHHGGGGEEEEEEEESS
T ss_pred HHHHHHHHHhcCCCCeEEEEeCcccCCCC-CCceeE-----EEEeccC--CccccccCHHHHHHHHhhcCCCCEEeCc
Confidence 13442 2244454 4444432222221 334454 4455541 1111223445677889999999887744
|
These proteins seem to play a role in Jak signalling.; GO: 0008168 methyltransferase activity, 0005737 cytoplasm; PDB: 2Y1W_C 2Y1X_D 2V7E_B 2V74_H 3R0Q_G 3B3F_B 3B3J_A 3B3G_A 3UA3_A 3UA4_B .... |
| >PF08003 Methyltransf_9: Protein of unknown function (DUF1698); InterPro: IPR010017 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=88.24 E-value=0.39 Score=50.48 Aligned_cols=97 Identities=16% Similarity=0.229 Sum_probs=65.4
Q ss_pred CeeeEeecCCCccchhhhccCCC-eeEEEecCCCCCCchhHhhhcccccccc-ccC-----CCCCCCCCccchhhhcCcc
Q 009719 373 AIRNIMDMNAFFGGFAAALTSDP-VWVMNVVPARKSSTLSVIYDRGLIGVYH-DWC-----EPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~~-VwvMnvvp~~~~ntl~vi~eRGLiG~~h-dwc-----e~fstYPrtyDLiHa~~~f 445 (527)
+=|.|+|+|||-|-|.=.|.... --|+-+=|..-. .+|+-+-+-++|.-. -.. |.++. ..+||+|=|.|++
T Consensus 115 ~gk~VLDIGC~nGY~~frM~~~GA~~ViGiDP~~lf-~~QF~~i~~~lg~~~~~~~lplgvE~Lp~-~~~FDtVF~MGVL 192 (315)
T PF08003_consen 115 KGKRVLDIGCNNGYYSFRMLGRGAKSVIGIDPSPLF-YLQFEAIKHFLGQDPPVFELPLGVEDLPN-LGAFDTVFSMGVL 192 (315)
T ss_pred CCCEEEEecCCCcHHHHHHhhcCCCEEEEECCChHH-HHHHHHHHHHhCCCccEEEcCcchhhccc-cCCcCEEEEeeeh
Confidence 45799999999999987775554 467777765443 234444344443211 011 22333 5899999998887
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
=+ |=+-.+.|.++=..|||||-+|+.
T Consensus 193 YH---------rr~Pl~~L~~Lk~~L~~gGeLvLE 218 (315)
T PF08003_consen 193 YH---------RRSPLDHLKQLKDSLRPGGELVLE 218 (315)
T ss_pred hc---------cCCHHHHHHHHHHhhCCCCEEEEE
Confidence 63 444577888999999999999976
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This entry represents a set of bacterial AdoMet-dependent tRNA (mo5U34)-methyltransferases. These enzymes catalyse the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at the wobble position (34) of tRNA []. The 5-methoxyuridine is subsequently converted to uridine-5-oxyacetic acid, a modified nucleoside that is apparently necessary for the efficient decoding of G-ending Pro, Ala, and Val codons in these organisms [].; GO: 0016300 tRNA (uracil) methyltransferase activity, 0002098 tRNA wobble uridine modification |
| >PRK14901 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=88.19 E-value=0.77 Score=49.80 Aligned_cols=39 Identities=21% Similarity=0.472 Sum_probs=26.8
Q ss_pred cccceeecccccCCcEEEEeC----CHHHHHHHHHHHhcC-Cce
Q 009719 461 VDLMVEMDRMLRPEGTVVVRD----SPEVIDKVSRIANTV-RWT 499 (527)
Q Consensus 461 ~~illEmDRILRP~G~~iird----~~~~~~~i~~i~~~l-~W~ 499 (527)
..+|-++=|.|||||.+|+.. ..+-...|+.+++.. .|+
T Consensus 364 ~~iL~~a~~~lkpgG~lvystcsi~~~Ene~~v~~~l~~~~~~~ 407 (434)
T PRK14901 364 AELLESLAPLLKPGGTLVYATCTLHPAENEAQIEQFLARHPDWK 407 (434)
T ss_pred HHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHHHhCCCcE
Confidence 467888999999999999874 223445566655543 354
|
|
| >TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family | Back alignment and domain information |
|---|
Probab=88.11 E-value=0.21 Score=49.28 Aligned_cols=30 Identities=10% Similarity=-0.189 Sum_probs=23.4
Q ss_pred eeEeecCCCccchhhhccCCC--eeEEEecCC
Q 009719 375 RNIMDMNAFFGGFAAALTSDP--VWVMNVVPA 404 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~--VwvMnvvp~ 404 (527)
..|||.|||.|-.|.+|.++. |+-+-++|.
T Consensus 36 ~rvLd~GCG~G~da~~LA~~G~~V~gvD~S~~ 67 (213)
T TIGR03840 36 ARVFVPLCGKSLDLAWLAEQGHRVLGVELSEI 67 (213)
T ss_pred CeEEEeCCCchhHHHHHHhCCCeEEEEeCCHH
Confidence 489999999999999998885 554544443
|
Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity. |
| >PHA03412 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=87.68 E-value=1.6 Score=44.51 Aligned_cols=72 Identities=11% Similarity=0.086 Sum_probs=46.2
Q ss_pred eeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecC--c---cccccc-----C-hHHHHHHHhhcccCC
Q 009719 159 SFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSR--C---LIPFTA-----Y-NATYLIEVDRLLRPG 227 (527)
Q Consensus 159 siAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~--~---l~hw~d-----~-~~~aL~Ei~RVLRPG 227 (527)
.+...|+.+.+++.|++....+.+..+|....++ +++||+|+|.= . ..+... . ...++....|.|+||
T Consensus 78 ~V~aVEID~~Al~~Ar~n~~~~~~~~~D~~~~~~-~~~FDlIIsNPPY~~~~~~d~~ar~~g~~~~~~li~~A~~Ll~~G 156 (241)
T PHA03412 78 EIVCVELNHTYYKLGKRIVPEATWINADALTTEF-DTLFDMAISNPPFGKIKTSDFKGKYTGAEFEYKVIERASQIARQG 156 (241)
T ss_pred EEEEEECCHHHHHHHHhhccCCEEEEcchhcccc-cCCccEEEECCCCCCccccccCCcccccHHHHHHHHHHHHHcCCC
Confidence 3444467788999998765456677788776665 57999999872 1 111100 0 112777888877777
Q ss_pred cEEEE
Q 009719 228 GYLVI 232 (527)
Q Consensus 228 G~lvi 232 (527)
+. ++
T Consensus 157 ~~-IL 160 (241)
T PHA03412 157 TF-II 160 (241)
T ss_pred EE-Ee
Confidence 75 54
|
|
| >COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=87.59 E-value=1.6 Score=44.85 Aligned_cols=83 Identities=19% Similarity=0.223 Sum_probs=55.6
Q ss_pred hhcccccccc-C----CeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCccccccc
Q 009719 143 VASFGGSMLS-E----NILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA 211 (527)
Q Consensus 143 vgsfga~Ll~-r----~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d 211 (527)
.|.++++|+. . .|++. +..+...+.|++. |+. +.+...|...--+++ .||+|+.. .++
T Consensus 105 SG~lt~~La~~vg~~G~v~ty-----E~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~-~vDav~LD-----mp~ 173 (256)
T COG2519 105 SGALTAYLARAVGPEGHVTTY-----EIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEE-DVDAVFLD-----LPD 173 (256)
T ss_pred chHHHHHHHHhhCCCceEEEE-----EecHHHHHHHHHHHHHhccccceEEEecccccccccc-ccCEEEEc-----CCC
Confidence 4555666652 1 23333 4567777788754 332 344556766666665 99999854 444
Q ss_pred ChHHHHHHHhhcccCCcEEEEecCCC
Q 009719 212 YNATYLIEVDRLLRPGGYLVISGPPV 237 (527)
Q Consensus 212 ~~~~aL~Ei~RVLRPGG~lviS~pp~ 237 (527)
+-. ++..++.+|||||.+++-.|.+
T Consensus 174 PW~-~le~~~~~Lkpgg~~~~y~P~v 198 (256)
T COG2519 174 PWN-VLEHVSDALKPGGVVVVYSPTV 198 (256)
T ss_pred hHH-HHHHHHHHhCCCcEEEEEcCCH
Confidence 445 9999999999999999998844
|
|
| >PF10294 Methyltransf_16: Putative methyltransferase; InterPro: IPR019410 There are a number of unidentified genes that have a high probability of coding for methyltransferases | Back alignment and domain information |
|---|
Probab=86.90 E-value=0.22 Score=47.27 Aligned_cols=122 Identities=20% Similarity=0.246 Sum_probs=57.3
Q ss_pred hhHHHHHHH--HHHHHHhhh---ccCCCCeeeEeecCCCcc--chhhhcc-CCCeeEEEecCCCCCCchhHhhhc-----
Q 009719 350 DSRRWRRRV--AYYKNTLNV---KLGTPAIRNIMDMNAFFG--GFAAALT-SDPVWVMNVVPARKSSTLSVIYDR----- 416 (527)
Q Consensus 350 d~~~W~~~v--~~Y~~~l~~---~i~~~~iRnvmDm~ag~G--gFaAaL~-~~~VwvMnvvp~~~~ntl~vi~eR----- 416 (527)
....|...+ ..|...... ......-++||+.|||.| |.+||.. ...-.|+.=.+. .-..+..-.++
T Consensus 17 G~~vW~aa~~La~~l~~~~~~~~~~~~~~~~~VLELGaG~Gl~gi~~a~~~~~~~Vv~TD~~~-~l~~l~~Ni~~N~~~~ 95 (173)
T PF10294_consen 17 GGKVWPAALVLARYLLSHSESEFNPELFRGKRVLELGAGTGLPGIAAAKLFGAARVVLTDYNE-VLELLRRNIELNGSLL 95 (173)
T ss_dssp ------HHHHHHHHHHH-------GGGTTTSEEEETT-TTSHHHHHHHHT-T-SEEEEEE-S--HHHHHHHHHHTT----
T ss_pred cEEEechHHHHHHHHHHhcccccchhhcCCceEEEECCccchhHHHHHhccCCceEEEeccch-hhHHHHHHHHhccccc
Confidence 356776544 346543210 012234569999999888 7877777 222223322221 10112222222
Q ss_pred -c-ccccccccCCCC--CC-CCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 417 -G-LIGVYHDWCEPF--ST-YPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 417 -G-LiG~~hdwce~f--st-YPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+ +--.-.||-+.. .. -++.||+|-|+.|+=.- =..+.++-=++++|.|+|-+++..
T Consensus 96 ~~~v~v~~L~Wg~~~~~~~~~~~~~D~IlasDv~Y~~---------~~~~~L~~tl~~ll~~~~~vl~~~ 156 (173)
T PF10294_consen 96 DGRVSVRPLDWGDELDSDLLEPHSFDVILASDVLYDE---------ELFEPLVRTLKRLLKPNGKVLLAY 156 (173)
T ss_dssp ----EEEE--TTS-HHHHHHS-SSBSEEEEES--S-G---------GGHHHHHHHHHHHBTT-TTEEEEE
T ss_pred cccccCcEEEecCcccccccccccCCEEEEecccchH---------HHHHHHHHHHHHHhCCCCEEEEEe
Confidence 1 234456898754 11 24789999998876421 123556666899999999988863
|
They make up approximately 0.6-1.6% of the genes in the yeast, human, mouse, Drosophila melanogaster, Caenorhabditis elegans, Arabidopsis thaliana, and Escherichia coli genomes []. This entry represents putative nicotinamide N-methyltransferases involved in rDNA silencing and in lifespan determination. ; PDB: 3BZB_A. |
| >PRK13168 rumA 23S rRNA m(5)U1939 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=86.87 E-value=1.2 Score=48.54 Aligned_cols=89 Identities=16% Similarity=0.187 Sum_probs=57.3
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC-cEEeecccc----CCCCCCCcccEEEecCcccccccCh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTR----RLPFPAFSFDIVHCSRCLIPFTAYN 213 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae----~LPFpD~SFDlV~cs~~l~hw~d~~ 213 (527)
+|.++..|..+... +...|.++.+++.|+++ ++. +.+..+|+. .+++.+++||+|++.- +.....
T Consensus 308 tG~~sl~la~~~~~---V~gvD~s~~al~~A~~n~~~~~~~~v~~~~~d~~~~l~~~~~~~~~fD~Vi~dP---Pr~g~~ 381 (443)
T PRK13168 308 LGNFTLPLARQAAE---VVGVEGVEAMVERARENARRNGLDNVTFYHANLEEDFTDQPWALGGFDKVLLDP---PRAGAA 381 (443)
T ss_pred CCHHHHHHHHhCCE---EEEEeCCHHHHHHHHHHHHHcCCCceEEEEeChHHhhhhhhhhcCCCCEEEECc---CCcChH
Confidence 56666666655433 33448888999888754 443 566667754 3567788999999752 222222
Q ss_pred HHHHHHHhhcccCCcEEEEecCCCCC
Q 009719 214 ATYLIEVDRLLRPGGYLVISGPPVQW 239 (527)
Q Consensus 214 ~~aL~Ei~RVLRPGG~lviS~pp~~~ 239 (527)
. .+..+.+ |+|++.+++|-.|..+
T Consensus 382 ~-~~~~l~~-~~~~~ivyvSCnp~tl 405 (443)
T PRK13168 382 E-VMQALAK-LGPKRIVYVSCNPATL 405 (443)
T ss_pred H-HHHHHHh-cCCCeEEEEEeChHHh
Confidence 2 4555555 6999999999776554
|
|
| >PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed | Back alignment and domain information |
|---|
Probab=86.77 E-value=2.5 Score=46.81 Aligned_cols=80 Identities=18% Similarity=0.284 Sum_probs=49.8
Q ss_pred cChHHHHHHHHH---c-CCCc-EEeeccccCCC-CCCCcccEEE----ecCc--cc-------cccc--------ChHHH
Q 009719 164 DSHKAQIQFALE---R-GIPA-FVAMLGTRRLP-FPAFSFDIVH----CSRC--LI-------PFTA--------YNATY 216 (527)
Q Consensus 164 D~seaqvq~A~e---R-g~pa-~~~v~dae~LP-FpD~SFDlV~----cs~~--l~-------hw~d--------~~~~a 216 (527)
|.++..++...+ | |+.. .+...|+..++ ...+.||.|. ||-- +. .|.. .+...
T Consensus 145 D~~~~R~~~L~~nl~r~G~~nv~v~~~D~~~~~~~~~~~fD~ILvDaPCSG~G~~rk~p~~~~~~s~~~v~~l~~lQ~~i 224 (470)
T PRK11933 145 EYSASRVKVLHANISRCGVSNVALTHFDGRVFGAALPETFDAILLDAPCSGEGTVRKDPDALKNWSPESNLEIAATQREL 224 (470)
T ss_pred eCCHHHHHHHHHHHHHcCCCeEEEEeCchhhhhhhchhhcCeEEEcCCCCCCcccccCHHHhhhCCHHHHHHHHHHHHHH
Confidence 555555544432 3 6654 45567776663 3346899999 7731 11 2221 12348
Q ss_pred HHHHhhcccCCcEEEEecCCCCCCCch
Q 009719 217 LIEVDRLLRPGGYLVISGPPVQWPKQD 243 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~pp~~~~~~~ 243 (527)
|....+.|||||++|.|+-..+...++
T Consensus 225 L~~A~~~LkpGG~LVYSTCT~~~eENE 251 (470)
T PRK11933 225 IESAFHALKPGGTLVYSTCTLNREENQ 251 (470)
T ss_pred HHHHHHHcCCCcEEEEECCCCCHHHHH
Confidence 888999999999999999866554333
|
|
| >PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.63 E-value=0.22 Score=57.45 Aligned_cols=128 Identities=17% Similarity=0.155 Sum_probs=67.8
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----cccc----c-cccccCCCCCCCCCccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGLI----G-VYHDWCEPFSTYPRTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGLi----G-~~hdwce~fstYPrtyDLiHa~~~ 444 (527)
+.|||++||+|+|+-++.....- .|+-+|.. .-+..+-+ -|+- - +-.|..+.+....++||+|=++-=
T Consensus 540 ~rVLDlf~gtG~~sl~aa~~Ga~--~V~~vD~s~~al~~a~~N~~~ng~~~~~v~~i~~D~~~~l~~~~~~fDlIilDPP 617 (702)
T PRK11783 540 KDFLNLFAYTGTASVHAALGGAK--STTTVDMSNTYLEWAERNFALNGLSGRQHRLIQADCLAWLKEAREQFDLIFIDPP 617 (702)
T ss_pred CeEEEcCCCCCHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHhCCCccceEEEEccHHHHHHHcCCCcCEEEECCC
Confidence 58999999999999888766432 13333332 22222221 1221 0 112222211123578999876521
Q ss_pred c-ccccCC-CCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCceeEEec
Q 009719 445 E-SLIKNP-GSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAVHD 504 (527)
Q Consensus 445 f-s~~~~~-~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~~~~~ 504 (527)
. +.-+.. ......=...+++-..=|+|+|||.+++.....-+....+.+..-.+++....
T Consensus 618 ~f~~~~~~~~~~~~~~~y~~l~~~a~~lL~~gG~l~~~~~~~~~~~~~~~~~~~g~~~~~i~ 679 (702)
T PRK11783 618 TFSNSKRMEDSFDVQRDHVALIKDAKRLLRPGGTLYFSNNKRGFKMDEEGLAKLGLKAEEIT 679 (702)
T ss_pred CCCCCCccchhhhHHHHHHHHHHHHHHHcCCCCEEEEEeCCccCChhHHHHHhCCCeEEEEe
Confidence 1 100000 00000001245666678899999999997655544455666666678777653
|
|
| >KOG3201 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=86.55 E-value=0.51 Score=45.92 Aligned_cols=89 Identities=18% Similarity=0.284 Sum_probs=55.7
Q ss_pred cccccccCCeeEEeeccCcChHHHHHHHHH---cC--CCcEEe-e----ccccCCCCCCCcccEEEecCcccccccChHH
Q 009719 146 FGGSMLSENILTLSFAPRDSHKAQIQFALE---RG--IPAFVA-M----LGTRRLPFPAFSFDIVHCSRCLIPFTAYNAT 215 (527)
Q Consensus 146 fga~Ll~r~V~~msiAp~D~seaqvq~A~e---Rg--~pa~~~-v----~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~ 215 (527)
.++-|+...+..-++--+|..+..|+-..+ +. .....+ + .-..++--.-++||.|.|+.|+ -+.+....
T Consensus 43 laglmia~~a~~~~v~ltdgne~svrnv~ki~~~n~~s~~tsc~vlrw~~~~aqsq~eq~tFDiIlaADCl-FfdE~h~s 121 (201)
T KOG3201|consen 43 LAGLMIACKAPDSSVWLTDGNEESVRNVEKIRNSNMASSLTSCCVLRWLIWGAQSQQEQHTFDIILAADCL-FFDEHHES 121 (201)
T ss_pred hhhhheeeecCCceEEEecCCHHHHHHHHHHHhcccccccceehhhHHHHhhhHHHHhhCcccEEEeccch-hHHHHHHH
Confidence 455566665555555555766655544432 22 001111 1 1122344456799999999998 44444455
Q ss_pred HHHHHhhcccCCcEEEEecC
Q 009719 216 YLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p 235 (527)
+..-|.+.|||.|..+++.|
T Consensus 122 LvdtIk~lL~p~g~Al~fsP 141 (201)
T KOG3201|consen 122 LVDTIKSLLRPSGRALLFSP 141 (201)
T ss_pred HHHHHHHHhCcccceeEecC
Confidence 88899999999999999988
|
|
| >PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.38 E-value=1.4 Score=47.71 Aligned_cols=89 Identities=18% Similarity=0.202 Sum_probs=51.2
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC---cEEeeccccCC-C-C--CCCcccEEEecCccccccc
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP---AFVAMLGTRRL-P-F--PAFSFDIVHCSRCLIPFTA 211 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p---a~~~v~dae~L-P-F--pD~SFDlV~cs~~l~hw~d 211 (527)
+|+|+-+.+..+.. .+...|.++.+++.|++. ++. ..+..+|+... + + ..++||+|++.-=. +..
T Consensus 231 tG~~~l~aa~~ga~--~V~~VD~s~~al~~a~~N~~~Ngl~~~~v~~i~~D~~~~l~~~~~~~~~fDlVilDPP~--f~~ 306 (396)
T PRK15128 231 TGGFAVSALMGGCS--QVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPK--FVE 306 (396)
T ss_pred CCHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCCcEEEEEccHHHHHHHHHhcCCCCCEEEECCCC--CCC
Confidence 55555444444431 233337778888877653 443 45667776442 1 2 35689999987211 111
Q ss_pred Ch----------HHHHHHHhhcccCCcEEEEecC
Q 009719 212 YN----------ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 212 ~~----------~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.. ..++.-..++|+|||.|+.++-
T Consensus 307 ~k~~l~~~~~~y~~l~~~a~~lLk~gG~lv~~sc 340 (396)
T PRK15128 307 NKSQLMGACRGYKDINMLAIQLLNPGGILLTFSC 340 (396)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 11 1134456799999999998654
|
|
| >PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2 | Back alignment and domain information |
|---|
Probab=86.20 E-value=1.4 Score=43.72 Aligned_cols=65 Identities=18% Similarity=0.100 Sum_probs=39.9
Q ss_pred cChHHHHHHHHHc----CC-CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|..+..++.|+++ +. .+.+..+|...---....||.|++..+.... =.++.+.||+||++++--.
T Consensus 104 E~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~~apfD~I~v~~a~~~i-------p~~l~~qL~~gGrLV~pi~ 173 (209)
T PF01135_consen 104 ERDPELAERARRNLARLGIDNVEVVVGDGSEGWPEEAPFDRIIVTAAVPEI-------PEALLEQLKPGGRLVAPIG 173 (209)
T ss_dssp ESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGGG-SEEEEEESSBBSS---------HHHHHTEEEEEEEEEEES
T ss_pred CccHHHHHHHHHHHHHhccCceeEEEcchhhccccCCCcCEEEEeeccchH-------HHHHHHhcCCCcEEEEEEc
Confidence 4456667777654 44 3456667753322235689999998776332 2346677999999998543
|
1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A .... |
| >PF06859 Bin3: Bicoid-interacting protein 3 (Bin3); InterPro: IPR010675 This entry represents a conserved region of approximately 120 residues within eukaryotic Bicoid-interacting protein 3 (Bin3) | Back alignment and domain information |
|---|
Probab=85.91 E-value=0.27 Score=44.52 Aligned_cols=39 Identities=26% Similarity=0.603 Sum_probs=27.7
Q ss_pred ccEEEecCcc--cc--cccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 197 FDIVHCSRCL--IP--FTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 197 FDlV~cs~~l--~h--w~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
||+|.|-.+. +| |.|.+ ..+++.+.+.|||||+|++-..
T Consensus 2 yDvilclSVtkWIHLn~GD~Gl~~~f~~~~~~L~pGG~lilEpQ 45 (110)
T PF06859_consen 2 YDVILCLSVTKWIHLNWGDEGLKRFFRRIYSLLRPGGILILEPQ 45 (110)
T ss_dssp EEEEEEES-HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE--
T ss_pred ccEEEEEEeeEEEEecCcCHHHHHHHHHHHHhhCCCCEEEEeCC
Confidence 8999987643 34 33333 2489999999999999999754
|
Bin3, which shows similarity to a number of protein methyltransferases that modify RNA-binding proteins, interacts with Bicoid, which itself directs pattern formation in the early Drosophila embryo. The interaction might allow Bicoid to switch between its dual roles in transcription and translation []. Note that proteins of the entry contain a conserved HLN motif.; GO: 0008168 methyltransferase activity; PDB: 3G07_B. |
| >COG4798 Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.64 E-value=1.8 Score=43.27 Aligned_cols=98 Identities=15% Similarity=0.101 Sum_probs=57.4
Q ss_pred CCCccchhhhccccccccCCeeEEeeccCcC-------hHHHHHHHHHcCCC------cEEe-eccccCCC-CCCCcccE
Q 009719 135 PWPESLSKVASFGGSMLSENILTLSFAPRDS-------HKAQIQFALERGIP------AFVA-MLGTRRLP-FPAFSFDI 199 (527)
Q Consensus 135 ~WP~Srd~vgsfga~Ll~r~V~~msiAp~D~-------seaqvq~A~eRg~p------a~~~-v~dae~LP-FpD~SFDl 199 (527)
=||-+-+.+.-|+.++-..| .+.+++|.+. -+.+-..++|.+.. ..+. ....+.+- .++.++|.
T Consensus 55 ~~PGgGy~TrI~s~~vgp~G-~Vy~~~p~e~~~~~~~~~~r~~~~~~e~~~aN~e~~~~~~~A~~~pq~~d~~~~~~~yh 133 (238)
T COG4798 55 LIPGGGYFTRIFSPAVGPKG-KVYAYVPAELTKFAKREGPRLNAAAREPVYANVEVIGKPLVALGAPQKLDLVPTAQNYH 133 (238)
T ss_pred EecCCccHhhhhchhcCCce-eEEEecchhhcccccchhhhhhhhhhhhhhhhhhhhCCcccccCCCCcccccccchhhh
Confidence 36777777777888888888 4566777553 12222233332211 0111 11122332 24566666
Q ss_pred EEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 200 VHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 200 V~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.-..- +| +....++.+++++.|||||.+++-.+
T Consensus 134 dmh~k~-i~-~~~A~~vna~vf~~LKPGGv~~V~dH 167 (238)
T COG4798 134 DMHNKN-IH-PATAAKVNAAVFKALKPGGVYLVEDH 167 (238)
T ss_pred hhhccc-cC-cchHHHHHHHHHHhcCCCcEEEEEec
Confidence 665543 34 44555699999999999999999665
|
|
| >PRK10901 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=85.56 E-value=0.65 Score=50.24 Aligned_cols=104 Identities=20% Similarity=0.259 Sum_probs=52.9
Q ss_pred eeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHh---hhc-cc-cc-cccccCCCCCCC-CCccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVI---YDR-GL-IG-VYHDWCEPFSTY-PRTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi---~eR-GL-iG-~~hdwce~fstY-PrtyDLiHa~~~ 444 (527)
..|||+|||.|+++..|.+. +.-| +-.|.. ..+..+ ++| |+ +- +.+|-.+....+ +.+||+|=++--
T Consensus 246 ~~VLDlgaG~G~~t~~la~~~~~~~v---~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~P 322 (427)
T PRK10901 246 ERVLDACAAPGGKTAHILELAPQAQV---VALDIDAQRLERVRENLQRLGLKATVIVGDARDPAQWWDGQPFDRILLDAP 322 (427)
T ss_pred CEEEEeCCCCChHHHHHHHHcCCCEE---EEEeCCHHHHHHHHHHHHHcCCCeEEEEcCcccchhhcccCCCCEEEECCC
Confidence 46999999999999777543 1222 222322 333332 222 32 11 122333221122 367999874432
Q ss_pred cccc----cCCCCCCCC---------CcccccceeecccccCCcEEEEeC
Q 009719 445 ESLI----KNPGSNKNS---------CSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 445 fs~~----~~~~~~~~r---------C~~~~illEmDRILRP~G~~iird 481 (527)
++.. ..|...-.+ .....+|-+.=++|+|||.++++.
T Consensus 323 cs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpGG~lvyst 372 (427)
T PRK10901 323 CSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPGGTLLYAT 372 (427)
T ss_pred CCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 2210 000000000 001357888899999999999874
|
|
| >PRK01581 speE spermidine synthase; Validated | Back alignment and domain information |
|---|
Probab=85.55 E-value=0.94 Score=48.85 Aligned_cols=148 Identities=14% Similarity=0.124 Sum_probs=71.6
Q ss_pred cCCCCeeeEeecCCCccchhhhccCCC-eeEEEecCCCCC-CchhHhhh--------cc-c----c-ccccccCCCCCCC
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSDP-VWVMNVVPARKS-STLSVIYD--------RG-L----I-GVYHDWCEPFSTY 432 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~~-VwvMnvvp~~~~-ntl~vi~e--------RG-L----i-G~~hdwce~fstY 432 (527)
..-..-++||++|+|.|+.+..+.+.+ += +|+-++-. .-+.++-+ +| + + -+..|-.+-...-
T Consensus 146 ~~h~~PkrVLIIGgGdG~tlrelLk~~~v~--~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~~ 223 (374)
T PRK01581 146 SKVIDPKRVLILGGGDGLALREVLKYETVL--HVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSSP 223 (374)
T ss_pred HhCCCCCEEEEECCCHHHHHHHHHhcCCCC--eEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHhc
Confidence 344567899999999999888787654 22 22222211 22232222 11 1 0 0111111111222
Q ss_pred CCccchhhhcCccccccCCCCC-CCCCcccccceeecccccCCcEEEEeCC-----HHHHHHHHHH-HhcCCceeEEecC
Q 009719 433 PRTYDLIHVSGIESLIKNPGSN-KNSCSLVDLMVEMDRMLRPEGTVVVRDS-----PEVIDKVSRI-ANTVRWTAAVHDK 505 (527)
Q Consensus 433 PrtyDLiHa~~~fs~~~~~~~~-~~rC~~~~illEmDRILRP~G~~iird~-----~~~~~~i~~i-~~~l~W~~~~~~~ 505 (527)
++.||+|=++- .. |... ..+---..++-.+-|.|+|||.+++... .+++..+.+. -+...+....+..
T Consensus 224 ~~~YDVIIvDl-~D----P~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~sp~~~~~~~~~i~~tL~~af~~v~~y~t~ 298 (374)
T PRK01581 224 SSLYDVIIIDF-PD----PATELLSTLYTSELFARIATFLTEDGAFVCQSNSPADAPLVYWSIGNTIEHAGLTVKSYHTI 298 (374)
T ss_pred CCCccEEEEcC-CC----ccccchhhhhHHHHHHHHHHhcCCCcEEEEecCChhhhHHHHHHHHHHHHHhCCceEEEEEe
Confidence 46799887762 11 1110 0111113466788999999999988753 2222233333 3333443333322
Q ss_pred CCCCCCCceEEEEEeccC
Q 009719 506 EPGSNGREKILVATKSLW 523 (527)
Q Consensus 506 e~~~~~~ekiLi~~K~~w 523 (527)
-+.-...-.+++|.|.-.
T Consensus 299 vPsyg~~WgF~~as~~~~ 316 (374)
T PRK01581 299 VPSFGTDWGFHIAANSAY 316 (374)
T ss_pred cCCCCCceEEEEEeCCcc
Confidence 111111255777776544
|
|
| >KOG4300 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.45 E-value=1 Score=45.36 Aligned_cols=115 Identities=20% Similarity=0.295 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHhhh----ccCCCCeeeEeecCCCccchhhhccCCC-eeEEEecCCCCC---Cc------hhHhhhcc
Q 009719 352 RRWRRRVAYYKNTLNV----KLGTPAIRNIMDMNAFFGGFAAALTSDP-VWVMNVVPARKS---ST------LSVIYDRG 417 (527)
Q Consensus 352 ~~W~~~v~~Y~~~l~~----~i~~~~iRnvmDm~ag~GgFaAaL~~~~-VwvMnvvp~~~~---nt------l~vi~eRG 417 (527)
...++.++.|++.|=. .+....==-||.+|||+|.---.+-..| .-|..+-|...- .+ -+.=++|=
T Consensus 51 ~~yne~~~~ykrelFs~i~~~~gk~~K~~vLEvgcGtG~Nfkfy~~~p~~svt~lDpn~~mee~~~ks~~E~k~~~~~~f 130 (252)
T KOG4300|consen 51 SIYNEIADSYKRELFSGIYYFLGKSGKGDVLEVGCGTGANFKFYPWKPINSVTCLDPNEKMEEIADKSAAEKKPLQVERF 130 (252)
T ss_pred HHHHHHHHHHHHHHHhhhHHHhcccCccceEEecccCCCCcccccCCCCceEEEeCCcHHHHHHHHHHHhhccCcceEEE
Confidence 5667788888864432 2233333458999999998777776555 345555554320 00 01112222
Q ss_pred ccccccccCCCCCCCC-CccchhhhcCccccccCCCCCCCCCcc---cccceeecccccCCcEEEEeCC
Q 009719 418 LIGVYHDWCEPFSTYP-RTYDLIHVSGIESLIKNPGSNKNSCSL---VDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 418 LiG~~hdwce~fstYP-rtyDLiHa~~~fs~~~~~~~~~~rC~~---~~illEmDRILRP~G~~iird~ 482 (527)
..|-- |.++--+ -+||.|=|.-++ |+. ...|=|+-|||||||.+|+=+.
T Consensus 131 vva~g----e~l~~l~d~s~DtVV~TlvL------------CSve~~~k~L~e~~rlLRpgG~iifiEH 183 (252)
T KOG4300|consen 131 VVADG----ENLPQLADGSYDTVVCTLVL------------CSVEDPVKQLNEVRRLLRPGGRIIFIEH 183 (252)
T ss_pred Eeech----hcCcccccCCeeeEEEEEEE------------eccCCHHHHHHHHHHhcCCCcEEEEEec
Confidence 22221 3343224 689998886444 333 5789999999999999998753
|
|
| >TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase | Back alignment and domain information |
|---|
Probab=85.36 E-value=0.66 Score=46.97 Aligned_cols=20 Identities=25% Similarity=0.406 Sum_probs=17.6
Q ss_pred ccceeecccccCCcEEEEeC
Q 009719 462 DLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 462 ~illEmDRILRP~G~~iird 481 (527)
.||-++=++|||||++|.+.
T Consensus 180 ~iL~~a~~~lkpgG~lvYst 199 (264)
T TIGR00446 180 ELIDSAFDALKPGGVLVYST 199 (264)
T ss_pred HHHHHHHHhcCCCCEEEEEe
Confidence 58888889999999999983
|
|
| >COG4122 Predicted O-methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.34 E-value=1.1 Score=44.91 Aligned_cols=66 Identities=27% Similarity=0.356 Sum_probs=43.7
Q ss_pred cChHHHHHHHHHc----CCCc--EEee-ccc-cCCC-CCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEe
Q 009719 164 DSHKAQIQFALER----GIPA--FVAM-LGT-RRLP-FPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 164 D~seaqvq~A~eR----g~pa--~~~v-~da-e~LP-FpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS 233 (527)
|..+.+.+.|++. |+.. .+.. +|+ +.|- +.+++||+|... +...+-..+|.+..+.|||||.+++-
T Consensus 91 E~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~~~fDliFID----adK~~yp~~le~~~~lLr~GGliv~D 165 (219)
T COG4122 91 ERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLDGSFDLVFID----ADKADYPEYLERALPLLRPGGLIVAD 165 (219)
T ss_pred eCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccCCCccEEEEe----CChhhCHHHHHHHHHHhCCCcEEEEe
Confidence 5566777777643 5543 2333 343 2333 678999999955 33333234999999999999999973
|
|
| >TIGR03704 PrmC_rel_meth putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific | Back alignment and domain information |
|---|
Probab=85.16 E-value=3.7 Score=41.40 Aligned_cols=73 Identities=19% Similarity=0.113 Sum_probs=43.5
Q ss_pred CcChHHHHHHHHHcC--CCcEEeeccccC-CCC-CCCcccEEEecCccc--------------ccc-------cCh----
Q 009719 163 RDSHKAQIQFALERG--IPAFVAMLGTRR-LPF-PAFSFDIVHCSRCLI--------------PFT-------AYN---- 213 (527)
Q Consensus 163 ~D~seaqvq~A~eRg--~pa~~~v~dae~-LPF-pD~SFDlV~cs~~l~--------------hw~-------d~~---- 213 (527)
.|.++.+++.|+++- ....+..+|... ++- ..+.||+|++.-=.+ |.+ .++
T Consensus 116 vDis~~al~~A~~N~~~~~~~~~~~D~~~~l~~~~~~~fDlVv~NPPy~~~~~~~~~~~e~~~~ep~~al~gg~dgl~~~ 195 (251)
T TIGR03704 116 ADIDPAAVRCARRNLADAGGTVHEGDLYDALPTALRGRVDILAANAPYVPTDAIALMPPEARDHEPRVALDGGADGLDVL 195 (251)
T ss_pred EECCHHHHHHHHHHHHHcCCEEEEeechhhcchhcCCCEeEEEECCCCCCchhhhcCCHHHHhCCCHHHhcCCCcHHHHH
Confidence 377788888887541 113455566433 331 135799999862101 110 011
Q ss_pred HHHHHHHhhcccCCcEEEEecC
Q 009719 214 ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 214 ~~aL~Ei~RVLRPGG~lviS~p 235 (527)
...+..+.++|||||.+++...
T Consensus 196 ~~i~~~a~~~L~~gG~l~l~~~ 217 (251)
T TIGR03704 196 RRVAAGAPDWLAPGGHLLVETS 217 (251)
T ss_pred HHHHHHHHHhcCCCCEEEEEEC
Confidence 1366677799999999999865
|
This protein family is closely related to two different families of protein-(glutamine-N5) methyltransferase. The first is PrmB, which modifies ribosomal protein L3 in some bacteria. The second is PrmC (HemK), which modifies peptide chain release factors 1 and 2 in most bacteria and also in eukaryotes. The glutamine side chain-binding motif NPPY shared by PrmB and PrmC is N[VAT]PY in this family. The protein substrate is unknown. |
| >COG2813 RsmC 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=85.14 E-value=3.4 Score=43.45 Aligned_cols=126 Identities=21% Similarity=0.287 Sum_probs=69.0
Q ss_pred eEeecCCCccchhhhccCCC---eeEEEecCCCCC--CchhHhhhccccc--ccc-ccCCCCCCCCCccchhhhcCcccc
Q 009719 376 NIMDMNAFFGGFAAALTSDP---VWVMNVVPARKS--STLSVIYDRGLIG--VYH-DWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~---VwvMnvvp~~~~--ntl~vi~eRGLiG--~~h-dwce~fstYPrtyDLiHa~~~fs~ 447 (527)
+|+|.|||+|=.++.|.+.. -++|-=+...+- .... +-+-|+=+ +++ |-+|+- ...||+|=++-=|-.
T Consensus 161 ~vlDlGCG~Gvlg~~la~~~p~~~vtmvDvn~~Av~~ar~N-l~~N~~~~~~v~~s~~~~~v---~~kfd~IisNPPfh~ 236 (300)
T COG2813 161 KVLDLGCGYGVLGLVLAKKSPQAKLTLVDVNARAVESARKN-LAANGVENTEVWASNLYEPV---EGKFDLIISNPPFHA 236 (300)
T ss_pred cEEEeCCCccHHHHHHHHhCCCCeEEEEecCHHHHHHHHHh-HHHcCCCccEEEEecccccc---cccccEEEeCCCccC
Confidence 99999999999999996654 456632222110 1111 22233333 222 222322 348999877655542
Q ss_pred ccCCCCCCCCCcc---cccceeecccccCCcEEEEe--CCHHHHHHHHHHHhcCCceeEEecCCCCCCCCceEEEEEe
Q 009719 448 IKNPGSNKNSCSL---VDLMVEMDRMLRPEGTVVVR--DSPEVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATK 520 (527)
Q Consensus 448 ~~~~~~~~~rC~~---~~illEmDRILRP~G~~iir--d~~~~~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K 520 (527)
-+ + =.. ..++-+-=+-|++||-++|= .-..+-.+++++.. ++..... .++=+||=+.|
T Consensus 237 G~------~-v~~~~~~~~i~~A~~~L~~gGeL~iVan~~l~y~~~L~~~Fg----~v~~la~----~~gf~Vl~a~k 299 (300)
T COG2813 237 GK------A-VVHSLAQEIIAAAARHLKPGGELWIVANRHLPYEKKLKELFG----NVEVLAK----NGGFKVLRAKK 299 (300)
T ss_pred Cc------c-hhHHHHHHHHHHHHHhhccCCEEEEEEcCCCChHHHHHHhcC----CEEEEEe----CCCEEEEEEec
Confidence 11 1 110 14556667889999977554 44556667777665 3333321 12446666665
|
|
| >KOG1271 consensus Methyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.08 E-value=1.2 Score=44.25 Aligned_cols=109 Identities=17% Similarity=0.248 Sum_probs=62.4
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCC-C---CchhHhhhc-ccc--------cccc-ccCCCCCCCCCccchhhh
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARK-S---STLSVIYDR-GLI--------GVYH-DWCEPFSTYPRTYDLIHV 441 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~-~---ntl~vi~eR-GLi--------G~~h-dwce~fstYPrtyDLiHa 441 (527)
+|||.|||-|.+---|.+...-- -.+=+|= + .--+-|.|| |+- -+.. +|| +.-||+||-
T Consensus 70 ~VlDLGtGNG~~L~~L~~egf~~-~L~GvDYs~~AV~LA~niAe~~~~~n~I~f~q~DI~~~~~~------~~qfdlvlD 142 (227)
T KOG1271|consen 70 RVLDLGTGNGHLLFQLAKEGFQS-KLTGVDYSEKAVELAQNIAERDGFSNEIRFQQLDITDPDFL------SGQFDLVLD 142 (227)
T ss_pred ceeeccCCchHHHHHHHHhcCCC-CccccccCHHHHHHHHHHHHhcCCCcceeEEEeeccCCccc------ccceeEEee
Confidence 89999999999988887665211 0111111 1 112233443 432 1222 555 577999998
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHH
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRI 492 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i 492 (527)
-+-+.... ...++..-.+..++==++++|+|||.|+|..=.-..+++.+.
T Consensus 143 KGT~DAis-Ls~d~~~~r~~~Y~d~v~~ll~~~gifvItSCN~T~dELv~~ 192 (227)
T KOG1271|consen 143 KGTLDAIS-LSPDGPVGRLVVYLDSVEKLLSPGGIFVITSCNFTKDELVEE 192 (227)
T ss_pred cCceeeee-cCCCCcccceeeehhhHhhccCCCcEEEEEecCccHHHHHHH
Confidence 88876543 111111122345666689999999999999744444443333
|
|
| >COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=84.05 E-value=3.5 Score=43.89 Aligned_cols=99 Identities=23% Similarity=0.363 Sum_probs=55.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHH----HcCCCc-EEeeccccCCC--CCCC-cccEEE----ecC-cccc-
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFAL----ERGIPA-FVAMLGTRRLP--FPAF-SFDIVH----CSR-CLIP- 208 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~----eRg~pa-~~~v~dae~LP--FpD~-SFDlV~----cs~-~l~h- 208 (527)
+.-.++++-+.+..++.+ |.++..++... +-|+.. .+...|+..++ ++.. .||.|. ||- ..++
T Consensus 171 Tthla~~~~~~~~iV~A~---D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~~~~~~~~~~~~~fD~iLlDaPCSg~G~irr 247 (355)
T COG0144 171 TTHLAELMENEGAIVVAV---DVSPKRLKRLRENLKRLGVRNVIVVNKDARRLAELLPGGEKFDRILLDAPCSGTGVIRR 247 (355)
T ss_pred HHHHHHhcCCCCceEEEE---cCCHHHHHHHHHHHHHcCCCceEEEecccccccccccccCcCcEEEECCCCCCCccccc
Confidence 333344444444443333 55554444332 336654 45556766554 2333 599998 442 2221
Q ss_pred -----ccc----------ChHHHHHHHhhcccCCcEEEEecCCCCCCCchh
Q 009719 209 -----FTA----------YNATYLIEVDRLLRPGGYLVISGPPVQWPKQDK 244 (527)
Q Consensus 209 -----w~d----------~~~~aL~Ei~RVLRPGG~lviS~pp~~~~~~~~ 244 (527)
|.. -+...|....++|||||.|+.|+-.+....++.
T Consensus 248 ~Pd~~~~~~~~~i~~l~~lQ~~iL~~a~~~lk~GG~LVYSTCS~~~eENE~ 298 (355)
T COG0144 248 DPDVKWRRTPEDIAELAKLQKEILAAALKLLKPGGVLVYSTCSLTPEENEE 298 (355)
T ss_pred CccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEccCCchhcCHH
Confidence 211 122388889999999999999997666555554
|
|
| >PLN02232 ubiquinone biosynthesis methyltransferase | Back alignment and domain information |
|---|
Probab=83.86 E-value=0.39 Score=44.88 Aligned_cols=46 Identities=20% Similarity=0.187 Sum_probs=33.7
Q ss_pred CCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 427 EPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 427 e~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+.++.-+.+||+|=+...+..+. +....|-||-|+|+|||.++|-|
T Consensus 36 ~~lp~~~~~fD~v~~~~~l~~~~---------d~~~~l~ei~rvLkpGG~l~i~d 81 (160)
T PLN02232 36 IDLPFDDCEFDAVTMGYGLRNVV---------DRLRAMKEMYRVLKPGSRVSILD 81 (160)
T ss_pred hhCCCCCCCeeEEEecchhhcCC---------CHHHHHHHHHHHcCcCeEEEEEE
Confidence 44442247999997765555432 34678999999999999999876
|
|
| >PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.32 E-value=0.35 Score=50.86 Aligned_cols=19 Identities=16% Similarity=0.207 Sum_probs=16.4
Q ss_pred eeEeecCCCccchhhhccC
Q 009719 375 RNIMDMNAFFGGFAAALTS 393 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~ 393 (527)
.+|||+|||.|.+++.|.+
T Consensus 82 ~~VLDIG~GtG~~a~~LA~ 100 (322)
T PRK13943 82 MRVLEIGGGTGYNAAVMSR 100 (322)
T ss_pred CEEEEEeCCccHHHHHHHH
Confidence 4799999999999988754
|
|
| >PRK03612 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=83.02 E-value=0.74 Score=51.32 Aligned_cols=124 Identities=16% Similarity=0.187 Sum_probs=60.5
Q ss_pred CCeeeEeecCCCccchhhhccCCC-eeEEEecCCCCCCchhHhhhc-cc------------cccc-cccCCCCCCCCCcc
Q 009719 372 PAIRNIMDMNAFFGGFAAALTSDP-VWVMNVVPARKSSTLSVIYDR-GL------------IGVY-HDWCEPFSTYPRTY 436 (527)
Q Consensus 372 ~~iRnvmDm~ag~GgFaAaL~~~~-VwvMnvvp~~~~ntl~vi~eR-GL------------iG~~-hdwce~fstYPrty 436 (527)
.+-++|+|+|+|.|+.+..+.+.+ |=.+-+|=.| +.-+.++-+. .+ +-+. .|=-+-....++.|
T Consensus 296 ~~~~rVL~IG~G~G~~~~~ll~~~~v~~v~~VEid-~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~Da~~~l~~~~~~f 374 (521)
T PRK03612 296 ARPRRVLVLGGGDGLALREVLKYPDVEQVTLVDLD-PAMTELARTSPALRALNGGALDDPRVTVVNDDAFNWLRKLAEKF 374 (521)
T ss_pred CCCCeEEEEcCCccHHHHHHHhCCCcCeEEEEECC-HHHHHHHHhCCcchhhhccccCCCceEEEEChHHHHHHhCCCCC
Confidence 456889999999999987776553 2111111111 1112222110 00 0001 01011112346789
Q ss_pred chhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-----CHHHHHHHHHHHhcCCcee
Q 009719 437 DLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-----SPEVIDKVSRIANTVRWTA 500 (527)
Q Consensus 437 DLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-----~~~~~~~i~~i~~~l~W~~ 500 (527)
|+|-++. ...+. +. ..+-- -.+++-++=|+|+|||.+++.. ..+.+.++.+..++....+
T Consensus 375 DvIi~D~-~~~~~-~~-~~~L~-t~ef~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~i~~~l~~~gf~v 439 (521)
T PRK03612 375 DVIIVDL-PDPSN-PA-LGKLY-SVEFYRLLKRRLAPDGLLVVQSTSPYFAPKAFWSIEATLEAAGLAT 439 (521)
T ss_pred CEEEEeC-CCCCC-cc-hhccc-hHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHHHHHHcCCEE
Confidence 9997762 21111 00 00000 0234556779999999999963 3444555555555553443
|
|
| >PRK13168 rumA 23S rRNA m(5)U1939 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=82.88 E-value=4.1 Score=44.34 Aligned_cols=129 Identities=16% Similarity=0.287 Sum_probs=69.0
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----cccc---ccccccCCCCCC--C-CCccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGLI---GVYHDWCEPFST--Y-PRTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGLi---G~~hdwce~fst--Y-PrtyDLiHa~~ 443 (527)
..|+|++||.|.|+.+|...-- .|+-.|.. ..+..+-+ .|+- =+..|+-+.+.. + +.+||+|-++
T Consensus 299 ~~VLDlgcGtG~~sl~la~~~~---~V~gvD~s~~al~~A~~n~~~~~~~~v~~~~~d~~~~l~~~~~~~~~fD~Vi~d- 374 (443)
T PRK13168 299 DRVLDLFCGLGNFTLPLARQAA---EVVGVEGVEAMVERARENARRNGLDNVTFYHANLEEDFTDQPWALGGFDKVLLD- 374 (443)
T ss_pred CEEEEEeccCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeChHHhhhhhhhhcCCCCEEEEC-
Confidence 4799999999999999976643 33444433 33333322 2321 111222222222 2 2568887543
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHHHHHH-HHHHHhcCCceeE---EecCCCCCCCCceEEEEE
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDK-VSRIANTVRWTAA---VHDKEPGSNGREKILVAT 519 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~-i~~i~~~l~W~~~---~~~~e~~~~~~ekiLi~~ 519 (527)
| .|-.+..++-.+-+ |.|++.++++=++..+.+ ++.+.+ --|++. ..|.=+.+..=|-|.+-+
T Consensus 375 -------P----Pr~g~~~~~~~l~~-~~~~~ivyvSCnp~tlaRDl~~L~~-~gY~l~~i~~~DmFP~T~HvE~v~lL~ 441 (443)
T PRK13168 375 -------P----PRAGAAEVMQALAK-LGPKRIVYVSCNPATLARDAGVLVE-AGYRLKRAGMLDMFPHTGHVESMALFE 441 (443)
T ss_pred -------c----CCcChHHHHHHHHh-cCCCeEEEEEeChHHhhccHHHHhh-CCcEEEEEEEeccCCCCCcEEEEEEEE
Confidence 1 22223344433333 589999999976665444 555543 236653 345555555556665554
Q ss_pred e
Q 009719 520 K 520 (527)
Q Consensus 520 K 520 (527)
|
T Consensus 442 r 442 (443)
T PRK13168 442 R 442 (443)
T ss_pred e
Confidence 4
|
|
| >TIGR00478 tly hemolysin TlyA family protein | Back alignment and domain information |
|---|
Probab=81.72 E-value=0.4 Score=48.17 Aligned_cols=23 Identities=17% Similarity=0.342 Sum_probs=19.7
Q ss_pred eeeEeecCCCccchhhhccCCCe
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPV 396 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~V 396 (527)
=.+|||+|||+|+|.-.|...++
T Consensus 76 ~~~vlDiG~gtG~~t~~l~~~ga 98 (228)
T TIGR00478 76 NKIVLDVGSSTGGFTDCALQKGA 98 (228)
T ss_pred CCEEEEcccCCCHHHHHHHHcCC
Confidence 35899999999999999987754
|
Hemolysins are exotoxins that attack blood cell membranes and cause cell rupture, often by forming a pore in the membrane. At least two members of this protein family have been characterized indirectly as pore-forming hemolysins, one from the spirochete Serpula (Treponema) hyodysenteriae and one from Mycobacterium tuberculosis. However, homology domains in this protein suggest methyltransferase activity (pfam01728) and RNA-binding activity (pfam01479). |
| >COG3963 Phospholipid N-methyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=81.69 E-value=1.7 Score=42.61 Aligned_cols=92 Identities=16% Similarity=0.033 Sum_probs=65.3
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCC-----CCCCcccEEEecCcccccccChH-HH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLP-----FPAFSFDIVHCSRCLIPFTAYNA-TY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LP-----FpD~SFDlV~cs~~l~hw~d~~~-~a 216 (527)
+|.+.-.+|++++---++.....+..-+..-.++--.+.+..+|+..|- +.+.-||.|+|..=+..++-+.. ..
T Consensus 59 TGV~TkaIL~~gv~~~~L~~iE~~~dF~~~L~~~~p~~~ii~gda~~l~~~l~e~~gq~~D~viS~lPll~~P~~~~iai 138 (194)
T COG3963 59 TGVITKAILSRGVRPESLTAIEYSPDFVCHLNQLYPGVNIINGDAFDLRTTLGEHKGQFFDSVISGLPLLNFPMHRRIAI 138 (194)
T ss_pred ccHhHHHHHhcCCCccceEEEEeCHHHHHHHHHhCCCccccccchhhHHHHHhhcCCCeeeeEEeccccccCcHHHHHHH
Confidence 6888889999988655554444444444443444444557777877765 78999999999876666665543 37
Q ss_pred HHHHhhcccCCcEEEEec
Q 009719 217 LIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~ 234 (527)
|.++.--|++||-++--+
T Consensus 139 le~~~~rl~~gg~lvqft 156 (194)
T COG3963 139 LESLLYRLPAGGPLVQFT 156 (194)
T ss_pred HHHHHHhcCCCCeEEEEE
Confidence 888888999999998643
|
|
| >PLN02823 spermine synthase | Back alignment and domain information |
|---|
Probab=81.53 E-value=5 Score=42.62 Aligned_cols=71 Identities=20% Similarity=0.268 Sum_probs=45.9
Q ss_pred CcChHHHHHHHHHcCC---------CcEEeeccccC-CCCCCCcccEEEecCccccccc------ChHHHHH-HHhhccc
Q 009719 163 RDSHKAQIQFALERGI---------PAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTA------YNATYLI-EVDRLLR 225 (527)
Q Consensus 163 ~D~seaqvq~A~eRg~---------pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d------~~~~aL~-Ei~RVLR 225 (527)
.|+.++.+++|++... ...+..+|+.. |.-.++.||+|++.. .-++.. ....++. .+.|.|+
T Consensus 133 VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~~~~~yDvIi~D~-~dp~~~~~~~~Lyt~eF~~~~~~~~L~ 211 (336)
T PLN02823 133 CDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEKRDEKFDVIIGDL-ADPVEGGPCYQLYTKSFYERIVKPKLN 211 (336)
T ss_pred EECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhhCCCCccEEEecC-CCccccCcchhhccHHHHHHHHHHhcC
Confidence 3566789999986521 13455566433 455578999999873 223211 1122676 8999999
Q ss_pred CCcEEEEec
Q 009719 226 PGGYLVISG 234 (527)
Q Consensus 226 PGG~lviS~ 234 (527)
|||.+++-.
T Consensus 212 p~Gvlv~q~ 220 (336)
T PLN02823 212 PGGIFVTQA 220 (336)
T ss_pred CCcEEEEec
Confidence 999998754
|
|
| >COG4123 Predicted O-methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.51 E-value=2.9 Score=42.83 Aligned_cols=90 Identities=17% Similarity=0.258 Sum_probs=52.7
Q ss_pred cChHHHHHHHHHc----CC--CcEEeeccccCCC--CCCCcccEEEecCcc---------------cccc--cChHHHHH
Q 009719 164 DSHKAQIQFALER----GI--PAFVAMLGTRRLP--FPAFSFDIVHCSRCL---------------IPFT--AYNATYLI 218 (527)
Q Consensus 164 D~seaqvq~A~eR----g~--pa~~~v~dae~LP--FpD~SFDlV~cs~~l---------------~hw~--d~~~~aL~ 218 (527)
+..+.+.++|++. ++ .+.+.++|.+... +.-.+||+|+|.==. -|+. ..-...++
T Consensus 75 Eiq~~~a~~A~~nv~ln~l~~ri~v~~~Di~~~~~~~~~~~fD~Ii~NPPyf~~~~~~~~~~~~~~Ar~e~~~~le~~i~ 154 (248)
T COG4123 75 EIQEEAAEMAQRNVALNPLEERIQVIEADIKEFLKALVFASFDLIICNPPYFKQGSRLNENPLRAIARHEITLDLEDLIR 154 (248)
T ss_pred EeCHHHHHHHHHHHHhCcchhceeEehhhHHHhhhcccccccCEEEeCCCCCCCccccCcChhhhhhhhhhcCCHHHHHH
Confidence 5567777777653 22 2445667765543 344589999997200 0110 01122566
Q ss_pred HHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEE
Q 009719 219 EVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYEL 260 (527)
Q Consensus 219 Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~ 260 (527)
=..+.|||||+|.+..+|.. -.++.++.+++.|..
T Consensus 155 ~a~~~lk~~G~l~~V~r~er-------l~ei~~~l~~~~~~~ 189 (248)
T COG4123 155 AAAKLLKPGGRLAFVHRPER-------LAEIIELLKSYNLEP 189 (248)
T ss_pred HHHHHccCCCEEEEEecHHH-------HHHHHHHHHhcCCCc
Confidence 67789999999999887532 124455566655543
|
|
| >PF10672 Methyltrans_SAM: S-adenosylmethionine-dependent methyltransferase; InterPro: IPR019614 Members of this entry are S-adenosylmethionine-dependent methyltransferases from gamma-proteobacterial species | Back alignment and domain information |
|---|
Probab=81.09 E-value=0.91 Score=47.20 Aligned_cols=90 Identities=21% Similarity=0.252 Sum_probs=55.3
Q ss_pred hhccccccccCCee-EEeeccCcChHHHHHHHHHc----CCC---cEEeeccccC-CCC--CCCcccEEEecC---cccc
Q 009719 143 VASFGGSMLSENIL-TLSFAPRDSHKAQIQFALER----GIP---AFVAMLGTRR-LPF--PAFSFDIVHCSR---CLIP 208 (527)
Q Consensus 143 vgsfga~Ll~r~V~-~msiAp~D~seaqvq~A~eR----g~p---a~~~v~dae~-LPF--pD~SFDlV~cs~---~l~h 208 (527)
+|+|+-+.+..|+. ++++ |.|...++.|++. |+. ..+..+|+.. |.- ..+.||+|++.= .-..
T Consensus 134 TGgfsv~Aa~gGA~~v~~V---D~S~~al~~a~~N~~lNg~~~~~~~~~~~Dvf~~l~~~~~~~~fD~IIlDPPsF~k~~ 210 (286)
T PF10672_consen 134 TGGFSVAAAAGGAKEVVSV---DSSKRALEWAKENAALNGLDLDRHRFIQGDVFKFLKRLKKGGRFDLIILDPPSFAKSK 210 (286)
T ss_dssp TTHHHHHHHHTTESEEEEE---ES-HHHHHHHHHHHHHTT-CCTCEEEEES-HHHHHHHHHHTT-EEEEEE--SSEESST
T ss_pred CCHHHHHHHHCCCCEEEEE---eCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHHHhcCCCCCEEEECCCCCCCCH
Confidence 89999988888874 5666 7888888888764 443 3456666422 211 246899999751 1111
Q ss_pred c--ccChHHHHHHHhhcccCCcEEEEecC
Q 009719 209 F--TAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 209 w--~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+ ..+-..++.-..++|+|||.|++++.
T Consensus 211 ~~~~~~y~~L~~~a~~ll~~gG~l~~~sc 239 (286)
T PF10672_consen 211 FDLERDYKKLLRRAMKLLKPGGLLLTCSC 239 (286)
T ss_dssp CEHHHHHHHHHHHHHHTEEEEEEEEEEE-
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 1 11112377888999999999998775
|
The diversity in the roles of methylation is matched by the almost bewildering number of methyltransferase enzymes that catalyse the methylation reaction. Although several classes of methyltransferase enzymes are known, the great majority of methylation reactions are catalysed by the S-adenosylmethionine-dependent methyltransferases. SAM (S-adenosylmethionine, also known as AdoMet) is well known as the methyl donor for the majority of methyltransferases that modify DNA, RNA, histones and other proteins, dictating replicational, transcriptional and translational fidelity, mismatch repair, chromatin modelling, epigenetic modifications and imprinting [].; GO: 0008168 methyltransferase activity; PDB: 2IGT_B 1WXX_A 1WXW_D 2CWW_B 2AS0_B 3V8V_B 3V97_A 3C0K_A 2B78_A 3LDF_A. |
| >PLN02366 spermidine synthase | Back alignment and domain information |
|---|
Probab=80.55 E-value=0.74 Score=48.16 Aligned_cols=105 Identities=18% Similarity=0.249 Sum_probs=53.9
Q ss_pred CCCeeeEeecCCCccchhhhccCCC-eeEEEecCCCCC------CchhHhhhccc----ccc-ccccCCCCCCC-CCccc
Q 009719 371 TPAIRNIMDMNAFFGGFAAALTSDP-VWVMNVVPARKS------STLSVIYDRGL----IGV-YHDWCEPFSTY-PRTYD 437 (527)
Q Consensus 371 ~~~iRnvmDm~ag~GgFaAaL~~~~-VwvMnvvp~~~~------ntl~vi~eRGL----iG~-~hdwce~fstY-PrtyD 437 (527)
...-++|||+|+|.|+.+..+.+.+ |.-+-+|=.+.. ..++-+ ..|+ +-+ ..|=-+-.... .+.||
T Consensus 89 ~~~pkrVLiIGgG~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~-~~~~~dpRv~vi~~Da~~~l~~~~~~~yD 167 (308)
T PLN02366 89 IPNPKKVLVVGGGDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDL-AVGFDDPRVNLHIGDGVEFLKNAPEGTYD 167 (308)
T ss_pred CCCCCeEEEEcCCccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhh-ccccCCCceEEEEChHHHHHhhccCCCCC
Confidence 3457899999999999999887764 433322222210 111110 0011 001 11100001123 36899
Q ss_pred hhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 438 LIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 438 LiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+|-++. +.... ....---..++-.+-|.|+|||.+++..
T Consensus 168 vIi~D~-~dp~~----~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 168 AIIVDS-SDPVG----PAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred EEEEcC-CCCCC----chhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 997652 32211 0000001346677899999999998753
|
|
| >PLN02585 magnesium protoporphyrin IX methyltransferase | Back alignment and domain information |
|---|
Probab=80.55 E-value=0.74 Score=48.33 Aligned_cols=72 Identities=14% Similarity=0.143 Sum_probs=43.1
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccc-c------cccccc-CCCCCCCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGL-I------GVYHDW-CEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGL-i------G~~hdw-ce~fstYPrtyDLiHa~~~f 445 (527)
.+|||+|||.|.++..|.+... +|+-.|-. +-|.+.-+|.- . +.--++ +..+...+.+||+|=|..++
T Consensus 146 ~~VLDlGcGtG~~a~~la~~g~---~V~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~f~~~Dl~~l~~~fD~Vv~~~vL 222 (315)
T PLN02585 146 VTVCDAGCGTGSLAIPLALEGA---IVSASDISAAMVAEAERRAKEALAALPPEVLPKFEANDLESLSGKYDTVTCLDVL 222 (315)
T ss_pred CEEEEecCCCCHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcccccccccceEEEEcchhhcCCCcCEEEEcCEE
Confidence 4799999999999999987653 44444443 55555555421 0 010111 11122336889999887777
Q ss_pred cccc
Q 009719 446 SLIK 449 (527)
Q Consensus 446 s~~~ 449 (527)
.++.
T Consensus 223 ~H~p 226 (315)
T PLN02585 223 IHYP 226 (315)
T ss_pred EecC
Confidence 6653
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.70A {Bacillus thuringiensis} Length = 242 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 8e-06
Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Query: 189 RLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWAD 248
LPF F+ + L L E+ R+L+ GY I+ ++ +
Sbjct: 109 SLPFENEQFEAIMAINSLEWTEEPLRA-LNEIKRVLKSDGYACIAILGPTAKPRENSYPR 167
Query: 249 L 249
L
Sbjct: 168 L 168
|
| >3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032} Length = 195 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 2e-05
Identities = 17/76 (22%), Positives = 25/76 (32%), Gaps = 8/76 (10%)
Query: 188 RRLPFPAFSFDIVHCSRCLIPFTA--YNATYLIEVDRLLRPGGYLVIS-GPPVQWPKQDK 244
FD++ + ++ F A L + R L G VI G W
Sbjct: 99 SVDQISETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGRGWV---- 154
Query: 245 EWADLQAVARALCYEL 260
+ D VA + EL
Sbjct: 155 -FGDFLEVAERVGLEL 169
|
| >3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A* Length = 257 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 4e-05
Identities = 23/148 (15%), Positives = 41/148 (27%), Gaps = 33/148 (22%)
Query: 164 DSHKAQIQFALERGIPAFVAMLGTR---------RLPFPAFSFDIVHCSRCL--IPFTAY 212
D I+ E A A R LPF D++ + I F
Sbjct: 76 DLFPDFIEIFNEN---AVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIYNIGF--- 129
Query: 213 NATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKK 272
+ E + L+ GG++ +S W + A+++ E+ + ++
Sbjct: 130 -ERGMNEWSKYLKKGGFIAVSE--ASWFT-SERPAEIEDFWMDAYPEISVIPTCIDKMER 185
Query: 273 PVGESCLSNQNEFGLELCDESDDPNYAW 300
G P W
Sbjct: 186 A------------GYTPTAHFILPENCW 201
|
| >2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum} Length = 209 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 5e-05
Identities = 15/87 (17%), Positives = 32/87 (36%), Gaps = 5/87 (5%)
Query: 188 RRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEW 246
R+LPF S V+ + + + E+ R+L+PGG I+ +D+ +
Sbjct: 81 RKLPFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINF----LTTKDERY 136
Query: 247 ADLQAVARALCYELIAVDGNTVIWKKP 273
+ + +L + +
Sbjct: 137 NKGEKIGEGEFLQLERGEKVIHSYVSL 163
|
| >1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41 Length = 219 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 5e-05
Identities = 20/98 (20%), Positives = 31/98 (31%), Gaps = 6/98 (6%)
Query: 164 DSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRL 223
+ + + A +RG+ LP SFD I F L E R+
Sbjct: 72 EPSERMAEIARKRGVFVLKGTA--ENLPLKDESFDFA-LMVTTICFVDDPERALKEAYRI 128
Query: 224 LRPGGYLVISGPPVQWPKQD---KEWADLQAVARALCY 258
L+ GGYL++ + K A +
Sbjct: 129 LKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFF 166
|
| >3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A* Length = 267 | Back alignment and structure |
|---|
Score = 44.1 bits (104), Expect = 5e-05
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 190 LPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVIS 233
LPF D++ S I + L E + L+ GGYL +S
Sbjct: 108 LPFRNEELDLIW-SEGAIYNIGFERG-LNEWRKYLKKGGYLAVS 149
|
| >3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei} Length = 276 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 6e-05
Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 5/71 (7%)
Query: 189 RLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVIS----GPPVQWPKQDK 244
LPF SFD + L + L + ++L+PGG + + G P+ K
Sbjct: 98 SLPFEDSSFDHIFVCFVLEHLQSPEE-ALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKK 156
Query: 245 EWADLQAVARA 255
+ R
Sbjct: 157 AIEAWNCLIRV 167
|
| >3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans} Length = 226 | Back alignment and structure |
|---|
Score = 43.5 bits (102), Expect = 6e-05
Identities = 19/127 (14%), Positives = 40/127 (31%), Gaps = 23/127 (18%)
Query: 156 LTLSFAPR-------DSHKAQIQFALERGIPA-FVAMLGTRRLPFP-AFSFDIVHCSRCL 206
F P+ D ++ A A G LP F ++
Sbjct: 62 DAARFGPQAARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR--- 118
Query: 207 IPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAVDGN 266
+ ++ + L P + + GP + P ++ A+ ++++A D
Sbjct: 119 --RGPTSV--ILRLPELAAPDAHFLYVGPRLNVP-------EVPERLAAVGWDIVAEDHV 167
Query: 267 TVIWKKP 273
+V+ P
Sbjct: 168 SVLAHAP 174
|
| >3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis} Length = 219 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 1e-04
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 189 RLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWAD 248
+P D++ SR + F AT E+ R+L+ GG I G +D A+
Sbjct: 104 NIPIEDNYADLI-VSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAE 162
Query: 249 L 249
+
Sbjct: 163 M 163
|
| >1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43 Length = 227 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 1e-04
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 188 RRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVIS 233
R+L F +FD V ++ F EV R+L+P G ++
Sbjct: 95 RKLSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY 141
|
| >1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A* Length = 239 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 2e-04
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 189 RLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVIS 233
LPFP SFDI+ C F+ + EV R+L+ G ++
Sbjct: 80 SLPFPDDSFDIITCRYAAHHFSDVRKA-VREVARVLKQDGRFLLV 123
|
| >4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A Length = 383 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 2e-04
Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 3/64 (4%)
Query: 190 LPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVIS--GPPVQWPKQDKEWA 247
P S DIV C+ + E+ R+LR GG L S + + ++
Sbjct: 160 EGVPDSSVDIVIS-NCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDP 218
Query: 248 DLQA 251
L
Sbjct: 219 ILYG 222
|
| >3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} Length = 273 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 2e-04
Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 5/70 (7%)
Query: 188 RRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWA 247
LPF SFD V + + L E+ R+LRPGG + I+ +
Sbjct: 121 MDLPFEDASFDAVW-ALESLHHMPDRGRALREMARVLRPGGTVAIA----DFVLLAPVEG 175
Query: 248 DLQAVARALC 257
+ A
Sbjct: 176 AKKEAVDAFR 185
|
| >1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41 Length = 260 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 3e-04
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 189 RLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVI 232
++PF F IV C F + + E R+L+ GG L++
Sbjct: 96 QMPFTDERFHIVTCRIAAHHFPNPASF-VSEAYRVLKKGGQLLL 138
|
| >3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032} Length = 203 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 4e-04
Identities = 12/98 (12%), Positives = 27/98 (27%), Gaps = 10/98 (10%)
Query: 164 DSHKAQIQFALER--GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEV 220
+ ++ A + + + L + + LI L+ +
Sbjct: 70 EPATRLVELARQTHPSVTFHHGTI--TDLSDSPKRWAGLLAWYSLIHMGPGELPDALVAL 127
Query: 221 DRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCY 258
+ GG L++S + VA A +
Sbjct: 128 RMAVEDGGGLLMS-----FFSGPSLEPMYHPVATAYRW 160
|
| >3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus} Length = 219 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 4e-04
Identities = 14/88 (15%), Positives = 28/88 (31%), Gaps = 5/88 (5%)
Query: 173 ALERGIPAFVAMLGT-RRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLV 231
+ G+ + ++P P + D + + + +L E+ R+ +P YL
Sbjct: 82 VNKLGLKNVEVLKSEENKIPLPDNTVDFIFMA-FTFHELSEPLKFLEELKRVAKPFAYLA 140
Query: 232 I---SGPPVQWPKQDKEWADLQAVARAL 256
I +E V L
Sbjct: 141 IIDWKKEERDKGPPPEEVYSEWEVGLIL 168
|
| >2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41 Length = 260 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 4e-04
Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 156 LTLSFAPR-------DSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIP 208
+L R D K ++ A E+G+ V LPFP+ +F+ V ++
Sbjct: 68 WSLFLQERGFEVVLVDPSKEMLEVAREKGVKNVVEAKA-EDLPFPSGAFEAVLALGDVLS 126
Query: 209 FTAYNATYLIEVDRLLRPGGYLVIS 233
+ E+ R+L P G L+ +
Sbjct: 127 YVENKDKAFSEIRRVLVPDGLLIAT 151
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.8 bits (97), Expect = 5e-04
Identities = 51/359 (14%), Positives = 99/359 (27%), Gaps = 115/359 (32%)
Query: 208 PFTAYNATYLIEVDRL------LRPGGYLVI-----SGPPVQWPKQDKEWADLQA-VARA 255
F YN + L +L LRP ++I SG K W + V +
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSG---------KTW--VALDVCLS 173
Query: 256 LCYELIAVDGNTVIWKKPVG-----ESCLSNQNEFGLELCDESDDPNYAWYFKLKKCVSG 310
Y++ + W + E+ L + ++ DPN+
Sbjct: 174 --YKVQCKMDFKIFWLN-LKNCNSPETVLEMLQKLLYQI-----DPNW--------TSRS 217
Query: 311 TSSVKGEYAVGTIPKWPQRLTKAPS--RAL-VMKNGYDVFEADSRRWRRRVAYYKNTLNV 367
S + + +I +RL K+ L V+ +V + N N+
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL---NV-------QNAKAW---NAFNL 264
Query: 368 K---LGTPAIRNIMD-----------MNAFFGG---------FAAALTSDPVWVMNVVP- 403
L T + + D ++ L P +P
Sbjct: 265 SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP----QDLPR 320
Query: 404 -ARKSSTLSVIYDRGLIG-VYHDWCEPFSTYPR-TYD----LIHVSGIESLIKNPGSNKN 456
++ + +I D + + D +I S + L P +
Sbjct: 321 EVLTTNPRRL----SIIAESIRDGLATWDNWKHVNCDKLTTIIESS-LNVL--EPAEYRK 373
Query: 457 SCSLVDLMVEMDRMLRPEGTVVV-------RDSPEVIDKVSRIANTVRW----TAAVHD 504
L V P + + D V++K+ + + + T ++
Sbjct: 374 --MFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS 430
|
| >3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* Length = 266 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 6e-04
Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 188 RRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVIS 233
FP +FD+++ ++ + N + + L+P G L+I+
Sbjct: 112 LTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLIT 158
|
| >2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens} Length = 215 | Back alignment and structure |
|---|
Score = 40.4 bits (94), Expect = 7e-04
Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 188 RRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQDK 244
++P S D+ CL +L E +R+L+PGG L ++ ++
Sbjct: 107 AQVPLEDESVDVAVF--CLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRT 161
|
| >3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus} Length = 230 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 8e-04
Identities = 11/73 (15%), Positives = 27/73 (36%), Gaps = 7/73 (9%)
Query: 164 DSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCL--IPFTAYN-ATYLIEV 220
++ + A E+ + + T +P+ FD V L + + + +V
Sbjct: 61 EAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLF----DPWAVIEKV 116
Query: 221 DRLLRPGGYLVIS 233
++ G ++ S
Sbjct: 117 KPYIKQNGVILAS 129
|
| >3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei} Length = 235 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 8e-04
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 190 LPFPAFSFDIVHCSRCL--IPFTAYNATYLIEVDRLLRPGGYLVIS 233
L F SFD L +P + + EV R+L+PG YL +
Sbjct: 95 LSFHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLV 140
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 527 | |||
| 4hg2_A | 257 | Methyltransferase type 11; structural genomics, PS | 99.08 | |
| 3h2b_A | 203 | SAM-dependent methyltransferase; alpha-beta protei | 98.98 | |
| 1vl5_A | 260 | Unknown conserved protein BH2331; putative methylt | 98.98 | |
| 2p7i_A | 250 | Hypothetical protein; putative methyltransferase, | 98.96 | |
| 3l8d_A | 242 | Methyltransferase; structural genomics, PSI, nysgr | 98.93 | |
| 2ld4_A | 176 | Anamorsin; methyltransferase-like fold, alpha/beta | 98.93 | |
| 2gs9_A | 211 | Hypothetical protein TT1324; methyl transferase, s | 98.87 | |
| 2yqz_A | 263 | Hypothetical protein TTHA0223; RNA methyltransfera | 98.86 | |
| 2o57_A | 297 | Putative sarcosine dimethylglycine methyltransfera | 98.84 | |
| 3ujc_A | 266 | Phosphoethanolamine N-methyltransferase; parasite; | 98.84 | |
| 1xxl_A | 239 | YCGJ protein; structural genomics, protein structu | 98.84 | |
| 3g5l_A | 253 | Putative S-adenosylmethionine dependent methyltran | 98.83 | |
| 1pjz_A | 203 | Thiopurine S-methyltransferase; polymorphism, S-ad | 98.83 | |
| 3dlc_A | 219 | Putative S-adenosyl-L-methionine-dependent methylt | 98.83 | |
| 3dh0_A | 219 | SAM dependent methyltransferase; cystal structure, | 98.82 | |
| 3dli_A | 240 | Methyltransferase; PSI-II, NYSGXRC, structural gen | 98.8 | |
| 1nkv_A | 256 | Hypothetical protein YJHP; structural genomics, PS | 98.8 | |
| 3hnr_A | 220 | Probable methyltransferase BT9727_4108; structural | 98.79 | |
| 2avn_A | 260 | Ubiquinone/menaquinone biosynthesis methyltransfe | 98.79 | |
| 3bus_A | 273 | REBM, methyltransferase; rebeccamycin synthesis; H | 98.78 | |
| 3ccf_A | 279 | Cyclopropane-fatty-acyl-phospholipid synthase; YP_ | 98.77 | |
| 2p35_A | 259 | Trans-aconitate 2-methyltransferase; SAM dependent | 98.77 | |
| 3bkw_A | 243 | MLL3908 protein, S-adenosylmethionine dependent me | 98.76 | |
| 2aot_A | 292 | HMT, histamine N-methyltransferase; classic methyl | 98.74 | |
| 3ege_A | 261 | Putative methyltransferase from antibiotic biosyn | 98.73 | |
| 3sm3_A | 235 | SAM-dependent methyltransferases; NESG, structural | 98.73 | |
| 3f4k_A | 257 | Putative methyltransferase; structural genomics, P | 98.72 | |
| 4htf_A | 285 | S-adenosylmethionine-dependent methyltransferase; | 98.71 | |
| 1xtp_A | 254 | LMAJ004091AAA; SGPP, structural genomics, PSI, pro | 98.71 | |
| 3thr_A | 293 | Glycine N-methyltransferase; GNMT, folate, methylt | 98.7 | |
| 3i9f_A | 170 | Putative type 11 methyltransferase; structural gen | 98.7 | |
| 3ou2_A | 218 | SAM-dependent methyltransferase; O-methyltransfera | 98.7 | |
| 2gb4_A | 252 | Thiopurine S-methyltransferase; 18204406, thiopuri | 98.69 | |
| 3ofk_A | 216 | Nodulation protein S; NODS, N-methyltransferase, S | 98.69 | |
| 3kkz_A | 267 | Uncharacterized protein Q5LES9; putative methyltra | 98.69 | |
| 3e23_A | 211 | Uncharacterized protein RPA2492; alpha-beta protei | 98.69 | |
| 3cgg_A | 195 | SAM-dependent methyltransferase; NP_600671.1, meth | 98.69 | |
| 2p8j_A | 209 | S-adenosylmethionine-dependent methyltransferase; | 98.68 | |
| 2ex4_A | 241 | Adrenal gland protein AD-003; methyltransferase, s | 98.67 | |
| 3mgg_A | 276 | Methyltransferase; NYSGXRC, PSI-II, protein struct | 98.66 | |
| 3vc1_A | 312 | Geranyl diphosphate 2-C-methyltransferase; rossman | 98.66 | |
| 4gek_A | 261 | TRNA (CMO5U34)-methyltransferase; structural genom | 98.66 | |
| 3cc8_A | 230 | Putative methyltransferase; structural genomics, j | 98.65 | |
| 3dtn_A | 234 | Putative methyltransferase MM_2633; structural gen | 98.65 | |
| 3pfg_A | 263 | N-methyltransferase; N,N-dimethyltransferase, SAM | 98.65 | |
| 4e2x_A | 416 | TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s | 98.65 | |
| 4fsd_A | 383 | Arsenic methyltransferase; rossmann fold; 1.75A {C | 98.64 | |
| 3lcc_A | 235 | Putative methyl chloride transferase; halide methy | 98.63 | |
| 2kw5_A | 202 | SLR1183 protein; structural genomics, northeast st | 98.62 | |
| 3g5t_A | 299 | Trans-aconitate 3-methyltransferase; structural ge | 98.62 | |
| 1vlm_A | 219 | SAM-dependent methyltransferase; possible histamin | 98.62 | |
| 3gu3_A | 284 | Methyltransferase; alpha-beta protein, structural | 98.62 | |
| 1y8c_A | 246 | S-adenosylmethionine-dependent methyltransferase; | 98.6 | |
| 3ocj_A | 305 | Putative exported protein; structural genomics, PS | 98.59 | |
| 3jwg_A | 219 | HEN1, methyltransferase type 12; 1.90A {Clostridiu | 98.58 | |
| 2xvm_A | 199 | Tellurite resistance protein TEHB; antibiotic resi | 98.57 | |
| 3e8s_A | 227 | Putative SAM dependent methyltransferase; NP_74470 | 98.57 | |
| 3jwh_A | 217 | HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena | 98.53 | |
| 2pxx_A | 215 | Uncharacterized protein MGC2408; structural genomi | 98.51 | |
| 1zx0_A | 236 | Guanidinoacetate N-methyltransferase; structural g | 98.49 | |
| 1ve3_A | 227 | Hypothetical protein PH0226; dimer, riken structur | 98.48 | |
| 2a14_A | 263 | Indolethylamine N-methyltransferase; SGC,INMT, str | 98.47 | |
| 3bxo_A | 239 | N,N-dimethyltransferase; desosamine, sugar, carboh | 98.47 | |
| 2vdw_A | 302 | Vaccinia virus capping enzyme D1 subunit; nucleoti | 98.46 | |
| 3orh_A | 236 | Guanidinoacetate N-methyltransferase; structura ge | 98.45 | |
| 3g2m_A | 299 | PCZA361.24; SAM-dependent methyltransferase, glyco | 98.45 | |
| 1ri5_A | 298 | MRNA capping enzyme; methyltransferase, M7G, messe | 98.44 | |
| 1kpg_A | 287 | CFA synthase;, cyclopropane-fatty-acyl-phospholipi | 98.43 | |
| 2g72_A | 289 | Phenylethanolamine N-methyltransferase; HET: SAM F | 98.43 | |
| 3hem_A | 302 | Cyclopropane-fatty-acyl-phospholipid synthase 2; p | 98.43 | |
| 3m70_A | 286 | Tellurite resistance protein TEHB homolog; structu | 98.42 | |
| 1p91_A | 269 | Ribosomal RNA large subunit methyltransferase A; R | 98.41 | |
| 2i62_A | 265 | Nicotinamide N-methyltransferase; structural genom | 98.41 | |
| 2zfu_A | 215 | Nucleomethylin, cerebral protein 1; nucleolar prot | 98.39 | |
| 3e8s_A | 227 | Putative SAM dependent methyltransferase; NP_74470 | 98.35 | |
| 2fk8_A | 318 | Methoxy mycolic acid synthase 4; S-adenosylmethion | 98.35 | |
| 2zfu_A | 215 | Nucleomethylin, cerebral protein 1; nucleolar prot | 98.34 | |
| 3d2l_A | 243 | SAM-dependent methyltransferase; ZP_00538691.1, st | 98.34 | |
| 3pfg_A | 263 | N-methyltransferase; N,N-dimethyltransferase, SAM | 98.31 | |
| 3m33_A | 226 | Uncharacterized protein; structural genomics, PSI- | 98.29 | |
| 3mti_A | 185 | RRNA methylase; SAM-dependent, PSI, MCSG, structur | 98.28 | |
| 3bgv_A | 313 | MRNA CAP guanine-N7 methyltransferase; alternative | 98.28 | |
| 1kpg_A | 287 | CFA synthase;, cyclopropane-fatty-acyl-phospholipi | 98.27 | |
| 3jwg_A | 219 | HEN1, methyltransferase type 12; 1.90A {Clostridiu | 98.23 | |
| 1wzn_A | 252 | SAM-dependent methyltransferase; structural genomi | 98.23 | |
| 3hm2_A | 178 | Precorrin-6Y C5,15-methyltransferase; alpha-beta-s | 98.21 | |
| 2xvm_A | 199 | Tellurite resistance protein TEHB; antibiotic resi | 98.2 | |
| 3htx_A | 950 | HEN1; HEN1, small RNA methyltransferase, protein-R | 98.19 | |
| 3g07_A | 292 | 7SK snRNA methylphosphate capping enzyme; structur | 98.19 | |
| 3hem_A | 302 | Cyclopropane-fatty-acyl-phospholipid synthase 2; p | 98.19 | |
| 3h2b_A | 203 | SAM-dependent methyltransferase; alpha-beta protei | 98.16 | |
| 3ggd_A | 245 | SAM-dependent methyltransferase; YP_325210.1, stru | 98.15 | |
| 3iv6_A | 261 | Putative Zn-dependent alcohol dehydrogenase; alpha | 98.15 | |
| 1dus_A | 194 | MJ0882; hypothetical protein, methanococcus jannas | 98.15 | |
| 1yzh_A | 214 | TRNA (guanine-N(7)-)-methyltransferase; alpha-beta | 98.12 | |
| 2p7i_A | 250 | Hypothetical protein; putative methyltransferase, | 98.12 | |
| 2fca_A | 213 | TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bac | 98.12 | |
| 1af7_A | 274 | Chemotaxis receptor methyltransferase CHER; chemot | 98.1 | |
| 3dp7_A | 363 | SAM-dependent methyltransferase; structural genomi | 98.08 | |
| 3evz_A | 230 | Methyltransferase; NYSGXRC, NEW YORK SGX research | 98.08 | |
| 3ocj_A | 305 | Putative exported protein; structural genomics, PS | 98.07 | |
| 1y8c_A | 246 | S-adenosylmethionine-dependent methyltransferase; | 98.06 | |
| 3dmg_A | 381 | Probable ribosomal RNA small subunit methyltransf; | 98.06 | |
| 4e2x_A | 416 | TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s | 98.05 | |
| 3bkx_A | 275 | SAM-dependent methyltransferase; YP_807781.1, cycl | 98.04 | |
| 2fk8_A | 318 | Methoxy mycolic acid synthase 4; S-adenosylmethion | 98.03 | |
| 1xtp_A | 254 | LMAJ004091AAA; SGPP, structural genomics, PSI, pro | 98.03 | |
| 3i53_A | 332 | O-methyltransferase; CO-complex, rossmann-like fol | 98.03 | |
| 2r3s_A | 335 | Uncharacterized protein; methyltransferase domain, | 98.03 | |
| 3ofk_A | 216 | Nodulation protein S; NODS, N-methyltransferase, S | 98.02 | |
| 3dlc_A | 219 | Putative S-adenosyl-L-methionine-dependent methylt | 98.02 | |
| 3dli_A | 240 | Methyltransferase; PSI-II, NYSGXRC, structural gen | 98.02 | |
| 3bxo_A | 239 | N,N-dimethyltransferase; desosamine, sugar, carboh | 98.0 | |
| 3lbf_A | 210 | Protein-L-isoaspartate O-methyltransferase; modifi | 98.0 | |
| 2qe6_A | 274 | Uncharacterized protein TFU_2867; putative methylt | 98.0 | |
| 3mti_A | 185 | RRNA methylase; SAM-dependent, PSI, MCSG, structur | 97.99 | |
| 3eey_A | 197 | Putative rRNA methylase; rRNA methylation, S-adeno | 97.99 | |
| 3grz_A | 205 | L11 mtase, ribosomal protein L11 methyltransferase | 97.99 | |
| 3fpf_A | 298 | Mtnas, putative uncharacterized protein; thermonic | 97.99 | |
| 3grz_A | 205 | L11 mtase, ribosomal protein L11 methyltransferase | 97.99 | |
| 3ou2_A | 218 | SAM-dependent methyltransferase; O-methyltransfera | 97.98 | |
| 3dxy_A | 218 | TRNA (guanine-N(7)-)-methyltransferase; rossmann f | 97.97 | |
| 4hg2_A | 257 | Methyltransferase type 11; structural genomics, PS | 97.97 | |
| 3p9n_A | 189 | Possible methyltransferase (methylase); RV2966C, a | 97.97 | |
| 3l8d_A | 242 | Methyltransferase; structural genomics, PSI, nysgr | 97.96 | |
| 3thr_A | 293 | Glycine N-methyltransferase; GNMT, folate, methylt | 97.94 | |
| 2ift_A | 201 | Putative methylase HI0767; NESG, Y767_haein, struc | 97.94 | |
| 3lcc_A | 235 | Putative methyl chloride transferase; halide methy | 97.93 | |
| 2pwy_A | 258 | TRNA (adenine-N(1)-)-methyltransferase; mtase, ado | 97.93 | |
| 2ip2_A | 334 | Probable phenazine-specific methyltransferase; pyo | 97.93 | |
| 2o57_A | 297 | Putative sarcosine dimethylglycine methyltransfera | 97.93 | |
| 3e05_A | 204 | Precorrin-6Y C5,15-methyltransferase (decarboxyla; | 97.93 | |
| 1qzz_A | 374 | RDMB, aclacinomycin-10-hydroxylase; anthracycline, | 97.92 | |
| 3i9f_A | 170 | Putative type 11 methyltransferase; structural gen | 97.92 | |
| 3hnr_A | 220 | Probable methyltransferase BT9727_4108; structural | 97.91 | |
| 3gwz_A | 369 | MMCR; methyltransferase, mitomycin, S-adenosyl met | 97.91 | |
| 3cgg_A | 195 | SAM-dependent methyltransferase; NP_600671.1, meth | 97.91 | |
| 3hp7_A | 291 | Hemolysin, putative; structural genomics, APC64019 | 97.9 | |
| 3eey_A | 197 | Putative rRNA methylase; rRNA methylation, S-adeno | 97.9 | |
| 1yb2_A | 275 | Hypothetical protein TA0852; structural genomics, | 97.89 | |
| 2i62_A | 265 | Nicotinamide N-methyltransferase; structural genom | 97.89 | |
| 2ex4_A | 241 | Adrenal gland protein AD-003; methyltransferase, s | 97.89 | |
| 3mgg_A | 276 | Methyltransferase; NYSGXRC, PSI-II, protein struct | 97.89 | |
| 3njr_A | 204 | Precorrin-6Y methylase; methyltransferase, decarbo | 97.89 | |
| 1x19_A | 359 | CRTF-related protein; methyltransferase, bacterioc | 97.88 | |
| 3q87_B | 170 | N6 adenine specific DNA methylase; SAM-methyltrans | 97.87 | |
| 1vbf_A | 231 | 231AA long hypothetical protein-L-isoaspartate O- | 97.87 | |
| 1xdz_A | 240 | Methyltransferase GIDB; MCSG, protein structure in | 97.86 | |
| 1vl5_A | 260 | Unknown conserved protein BH2331; putative methylt | 97.85 | |
| 3cc8_A | 230 | Putative methyltransferase; structural genomics, j | 97.85 | |
| 1nkv_A | 256 | Hypothetical protein YJHP; structural genomics, PS | 97.84 | |
| 1i9g_A | 280 | Hypothetical protein RV2118C; mtase, adoMet, cryst | 97.84 | |
| 2yqz_A | 263 | Hypothetical protein TTHA0223; RNA methyltransfera | 97.84 | |
| 3ckk_A | 235 | TRNA (guanine-N(7)-)-methyltransferase; mettl1, S- | 97.83 | |
| 3m70_A | 286 | Tellurite resistance protein TEHB homolog; structu | 97.83 | |
| 3bus_A | 273 | REBM, methyltransferase; rebeccamycin synthesis; H | 97.83 | |
| 1dus_A | 194 | MJ0882; hypothetical protein, methanococcus jannas | 97.83 | |
| 3hm2_A | 178 | Precorrin-6Y C5,15-methyltransferase; alpha-beta-s | 97.83 | |
| 3gdh_A | 241 | Trimethylguanosine synthase homolog; M7G, CAP, dim | 97.82 | |
| 3u81_A | 221 | Catechol O-methyltransferase; neurotransmitter deg | 97.81 | |
| 3mq2_A | 218 | 16S rRNA methyltransferase; methyltranferase, ribo | 97.81 | |
| 2pjd_A | 343 | Ribosomal RNA small subunit methyltransferase C; g | 97.81 | |
| 1jsx_A | 207 | Glucose-inhibited division protein B; methyltransf | 97.81 | |
| 2avn_A | 260 | Ubiquinone/menaquinone biosynthesis methyltransfe | 97.81 | |
| 1fp1_D | 372 | Isoliquiritigenin 2'-O-methyltransferase; protein- | 97.8 | |
| 1xxl_A | 239 | YCGJ protein; structural genomics, protein structu | 97.8 | |
| 1xdz_A | 240 | Methyltransferase GIDB; MCSG, protein structure in | 97.79 | |
| 3ccf_A | 279 | Cyclopropane-fatty-acyl-phospholipid synthase; YP_ | 97.79 | |
| 3e23_A | 211 | Uncharacterized protein RPA2492; alpha-beta protei | 97.79 | |
| 3sm3_A | 235 | SAM-dependent methyltransferases; NESG, structural | 97.78 | |
| 3ujc_A | 266 | Phosphoethanolamine N-methyltransferase; parasite; | 97.77 | |
| 2frn_A | 278 | Hypothetical protein PH0793; structural genomics, | 97.77 | |
| 1l3i_A | 192 | Precorrin-6Y methyltransferase/putative decarboxyl | 97.76 | |
| 1ej0_A | 180 | FTSJ; methyltransferase, adoMet, adenosyl methioni | 97.76 | |
| 2aot_A | 292 | HMT, histamine N-methyltransferase; classic methyl | 97.76 | |
| 3ege_A | 261 | Putative methyltransferase from antibiotic biosyn | 97.76 | |
| 4dzr_A | 215 | Protein-(glutamine-N5) methyltransferase, release | 97.76 | |
| 1vlm_A | 219 | SAM-dependent methyltransferase; possible histamin | 97.75 | |
| 2yxd_A | 183 | Probable cobalt-precorrin-6Y C(15)-methyltransfer | 97.75 | |
| 2fpo_A | 202 | Methylase YHHF; structural genomics, putative meth | 97.75 | |
| 1tw3_A | 360 | COMT, carminomycin 4-O-methyltransferase; anthracy | 97.75 | |
| 1fp2_A | 352 | Isoflavone O-methyltransferase; protein-product co | 97.75 | |
| 4htf_A | 285 | S-adenosylmethionine-dependent methyltransferase; | 97.74 | |
| 1ve3_A | 227 | Hypothetical protein PH0226; dimer, riken structur | 97.74 | |
| 3mb5_A | 255 | SAM-dependent methyltransferase; RNA methyltransfe | 97.73 | |
| 3f4k_A | 257 | Putative methyltransferase; structural genomics, P | 97.72 | |
| 3p2e_A | 225 | 16S rRNA methylase; methyltransferase, transferase | 97.72 | |
| 1nt2_A | 210 | Fibrillarin-like PRE-rRNA processing protein; adeM | 97.72 | |
| 3kkz_A | 267 | Uncharacterized protein Q5LES9; putative methyltra | 97.72 | |
| 3q7e_A | 349 | Protein arginine N-methyltransferase 1; HET: SAH; | 97.71 | |
| 3dh0_A | 219 | SAM dependent methyltransferase; cystal structure, | 97.71 | |
| 2gs9_A | 211 | Hypothetical protein TT1324; methyl transferase, s | 97.71 | |
| 3evz_A | 230 | Methyltransferase; NYSGXRC, NEW YORK SGX research | 97.71 | |
| 2kw5_A | 202 | SLR1183 protein; structural genomics, northeast st | 97.7 | |
| 1l3i_A | 192 | Precorrin-6Y methyltransferase/putative decarboxyl | 97.69 | |
| 3gu3_A | 284 | Methyltransferase; alpha-beta protein, structural | 97.69 | |
| 3d2l_A | 243 | SAM-dependent methyltransferase; ZP_00538691.1, st | 97.68 | |
| 3g5l_A | 253 | Putative S-adenosylmethionine dependent methyltran | 97.67 | |
| 2fyt_A | 340 | Protein arginine N-methyltransferase 3; structural | 97.67 | |
| 2qm3_A | 373 | Predicted methyltransferase; putative methyltransf | 97.67 | |
| 2pxx_A | 215 | Uncharacterized protein MGC2408; structural genomi | 97.67 | |
| 3dtn_A | 234 | Putative methyltransferase MM_2633; structural gen | 97.65 | |
| 3q87_B | 170 | N6 adenine specific DNA methylase; SAM-methyltrans | 97.65 | |
| 3lpm_A | 259 | Putative methyltransferase; structural genomics, p | 97.63 | |
| 3hp7_A | 291 | Hemolysin, putative; structural genomics, APC64019 | 97.63 | |
| 1ws6_A | 171 | Methyltransferase; structural genomics, riken stru | 97.61 | |
| 3g5t_A | 299 | Trans-aconitate 3-methyltransferase; structural ge | 97.61 | |
| 3reo_A | 368 | (ISO)eugenol O-methyltransferase; directed evoluti | 97.61 | |
| 3jwh_A | 217 | HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena | 97.6 | |
| 1dl5_A | 317 | Protein-L-isoaspartate O-methyltransferase; isoasp | 97.59 | |
| 3sso_A | 419 | Methyltransferase; macrolide, natural product, ros | 97.59 | |
| 3e05_A | 204 | Precorrin-6Y C5,15-methyltransferase (decarboxyla; | 97.58 | |
| 2ipx_A | 233 | RRNA 2'-O-methyltransferase fibrillarin; FBL, stru | 97.58 | |
| 3p9c_A | 364 | Caffeic acid O-methyltransferase; S-adenosylmethio | 97.57 | |
| 2p35_A | 259 | Trans-aconitate 2-methyltransferase; SAM dependent | 97.56 | |
| 3bkw_A | 243 | MLL3908 protein, S-adenosylmethionine dependent me | 97.55 | |
| 3r0q_C | 376 | Probable protein arginine N-methyltransferase 4.2; | 97.55 | |
| 3r0q_C | 376 | Probable protein arginine N-methyltransferase 4.2; | 97.55 | |
| 3mcz_A | 352 | O-methyltransferase; adomet_mtases, S-adenosylmeth | 97.55 | |
| 4dcm_A | 375 | Ribosomal RNA large subunit methyltransferase G; 2 | 97.55 | |
| 2yvl_A | 248 | TRMI protein, hypothetical protein; tRNA, methyltr | 97.54 | |
| 1fbn_A | 230 | MJ fibrillarin homologue; MJ proteins, ribosomal R | 97.54 | |
| 1i1n_A | 226 | Protein-L-isoaspartate O-methyltransferase; S-aden | 97.54 | |
| 3opn_A | 232 | Putative hemolysin; structural genomics, PSI-2, pr | 97.53 | |
| 1nt2_A | 210 | Fibrillarin-like PRE-rRNA processing protein; adeM | 97.53 | |
| 2fhp_A | 187 | Methylase, putative; alpha-beta-alpha sandwich, st | 97.53 | |
| 2nxc_A | 254 | L11 mtase, ribosomal protein L11 methyltransferase | 97.52 | |
| 3uwp_A | 438 | Histone-lysine N-methyltransferase, H3 lysine-79; | 97.51 | |
| 3tfw_A | 248 | Putative O-methyltransferase; PSI-biology, nysgrc, | 97.5 | |
| 3lpm_A | 259 | Putative methyltransferase; structural genomics, p | 97.5 | |
| 3orh_A | 236 | Guanidinoacetate N-methyltransferase; structura ge | 97.5 | |
| 3g2m_A | 299 | PCZA361.24; SAM-dependent methyltransferase, glyco | 97.49 | |
| 1o54_A | 277 | SAM-dependent O-methyltransferase; TM0748, structu | 97.49 | |
| 2esr_A | 177 | Methyltransferase; structural genomics, hypothetic | 97.48 | |
| 1jsx_A | 207 | Glucose-inhibited division protein B; methyltransf | 97.48 | |
| 2bm8_A | 236 | Cephalosporin hydroxylase CMCI; cephamycin biosynt | 97.48 | |
| 3lst_A | 348 | CALO1 methyltransferase; calicheamicin, enediyne, | 97.47 | |
| 1wzn_A | 252 | SAM-dependent methyltransferase; structural genomi | 97.47 | |
| 1ej0_A | 180 | FTSJ; methyltransferase, adoMet, adenosyl methioni | 97.47 | |
| 3m33_A | 226 | Uncharacterized protein; structural genomics, PSI- | 97.46 | |
| 1pjz_A | 203 | Thiopurine S-methyltransferase; polymorphism, S-ad | 97.46 | |
| 2vdv_E | 246 | TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl | 97.46 | |
| 2yxe_A | 215 | Protein-L-isoaspartate O-methyltransferase; rossma | 97.45 | |
| 3bgv_A | 313 | MRNA CAP guanine-N7 methyltransferase; alternative | 97.45 | |
| 4dzr_A | 215 | Protein-(glutamine-N5) methyltransferase, release | 97.44 | |
| 3i53_A | 332 | O-methyltransferase; CO-complex, rossmann-like fol | 97.44 | |
| 3q7e_A | 349 | Protein arginine N-methyltransferase 1; HET: SAH; | 97.44 | |
| 1zx0_A | 236 | Guanidinoacetate N-methyltransferase; structural g | 97.44 | |
| 3lst_A | 348 | CALO1 methyltransferase; calicheamicin, enediyne, | 97.43 | |
| 2yxd_A | 183 | Probable cobalt-precorrin-6Y C(15)-methyltransfer | 97.42 | |
| 1qzz_A | 374 | RDMB, aclacinomycin-10-hydroxylase; anthracycline, | 97.42 | |
| 3duw_A | 223 | OMT, O-methyltransferase, putative; alternating of | 97.42 | |
| 3g89_A | 249 | Ribosomal RNA small subunit methyltransferase G; 1 | 97.41 | |
| 2b3t_A | 276 | Protein methyltransferase HEMK; translation termin | 97.4 | |
| 2ip2_A | 334 | Probable phenazine-specific methyltransferase; pyo | 97.4 | |
| 2b3t_A | 276 | Protein methyltransferase HEMK; translation termin | 97.4 | |
| 2plw_A | 201 | Ribosomal RNA methyltransferase, putative; malaria | 97.39 | |
| 1zg3_A | 358 | Isoflavanone 4'-O-methyltransferase; rossman fold, | 97.39 | |
| 3u81_A | 221 | Catechol O-methyltransferase; neurotransmitter deg | 97.38 | |
| 2p8j_A | 209 | S-adenosylmethionine-dependent methyltransferase; | 97.38 | |
| 3dp7_A | 363 | SAM-dependent methyltransferase; structural genomi | 97.38 | |
| 1o9g_A | 250 | RRNA methyltransferase; antibiotic resistance, Se- | 97.38 | |
| 4fsd_A | 383 | Arsenic methyltransferase; rossmann fold; 1.75A {C | 97.37 | |
| 3vc1_A | 312 | Geranyl diphosphate 2-C-methyltransferase; rossman | 97.37 | |
| 3ntv_A | 232 | MW1564 protein; rossmann fold, putative methyltran | 97.37 | |
| 3g89_A | 249 | Ribosomal RNA small subunit methyltransferase G; 1 | 97.37 | |
| 3bwc_A | 304 | Spermidine synthase; SAM, SGPP, structura genomics | 97.37 | |
| 1jg1_A | 235 | PIMT;, protein-L-isoaspartate O-methyltransferase; | 97.37 | |
| 1ixk_A | 315 | Methyltransferase; open beta sheet; 1.90A {Pyrococ | 97.36 | |
| 2nxc_A | 254 | L11 mtase, ribosomal protein L11 methyltransferase | 97.36 | |
| 2frn_A | 278 | Hypothetical protein PH0793; structural genomics, | 97.35 | |
| 1g6q_1 | 328 | HnRNP arginine N-methyltransferase; SAM-binding do | 97.35 | |
| 1g6q_1 | 328 | HnRNP arginine N-methyltransferase; SAM-binding do | 97.34 | |
| 3giw_A | 277 | Protein of unknown function DUF574; rossmann-fold | 97.34 | |
| 2g72_A | 289 | Phenylethanolamine N-methyltransferase; HET: SAM F | 97.33 | |
| 3njr_A | 204 | Precorrin-6Y methylase; methyltransferase, decarbo | 97.33 | |
| 1x19_A | 359 | CRTF-related protein; methyltransferase, bacterioc | 97.32 | |
| 2bm8_A | 236 | Cephalosporin hydroxylase CMCI; cephamycin biosynt | 97.31 | |
| 3tfw_A | 248 | Putative O-methyltransferase; PSI-biology, nysgrc, | 97.3 | |
| 3dr5_A | 221 | Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 | 97.3 | |
| 1ri5_A | 298 | MRNA capping enzyme; methyltransferase, M7G, messe | 97.3 | |
| 3ntv_A | 232 | MW1564 protein; rossmann fold, putative methyltran | 97.3 | |
| 2pbf_A | 227 | Protein-L-isoaspartate O-methyltransferase beta-A | 97.28 | |
| 3opn_A | 232 | Putative hemolysin; structural genomics, PSI-2, pr | 97.27 | |
| 2ozv_A | 260 | Hypothetical protein ATU0636; structural genomics, | 97.27 | |
| 2y1w_A | 348 | Histone-arginine methyltransferase CARM1; histone | 97.27 | |
| 2b25_A | 336 | Hypothetical protein; structural genomics, methyl | 97.26 | |
| 2r3s_A | 335 | Uncharacterized protein; methyltransferase domain, | 97.26 | |
| 4gek_A | 261 | TRNA (CMO5U34)-methyltransferase; structural genom | 97.25 | |
| 3c3p_A | 210 | Methyltransferase; NP_951602.1, structural genomic | 97.22 | |
| 3mcz_A | 352 | O-methyltransferase; adomet_mtases, S-adenosylmeth | 97.22 | |
| 3tr6_A | 225 | O-methyltransferase; cellular processes; HET: SAH; | 97.22 | |
| 3gwz_A | 369 | MMCR; methyltransferase, mitomycin, S-adenosyl met | 97.21 | |
| 1yzh_A | 214 | TRNA (guanine-N(7)-)-methyltransferase; alpha-beta | 97.19 | |
| 1tw3_A | 360 | COMT, carminomycin 4-O-methyltransferase; anthracy | 97.17 | |
| 2igt_A | 332 | SAM dependent methyltransferase; alpha-beta sandwi | 97.17 | |
| 3tma_A | 354 | Methyltransferase; thump domain; 2.05A {Thermus th | 97.17 | |
| 3dou_A | 191 | Ribosomal RNA large subunit methyltransferase J; c | 97.16 | |
| 3iv6_A | 261 | Putative Zn-dependent alcohol dehydrogenase; alpha | 97.16 | |
| 1g8a_A | 227 | Fibrillarin-like PRE-rRNA processing protein; rRNA | 97.16 | |
| 1r18_A | 227 | Protein-L-isoaspartate(D-aspartate)-O-methyltrans; | 97.15 | |
| 2y1w_A | 348 | Histone-arginine methyltransferase CARM1; histone | 97.15 | |
| 2fyt_A | 340 | Protein arginine N-methyltransferase 3; structural | 97.13 | |
| 2gb4_A | 252 | Thiopurine S-methyltransferase; 18204406, thiopuri | 97.13 | |
| 2ipx_A | 233 | RRNA 2'-O-methyltransferase fibrillarin; FBL, stru | 97.12 | |
| 2gpy_A | 233 | O-methyltransferase; structural genomics, PSI, pro | 97.12 | |
| 4df3_A | 233 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 97.1 | |
| 3r3h_A | 242 | O-methyltransferase, SAM-dependent; structural gen | 97.1 | |
| 2a14_A | 263 | Indolethylamine N-methyltransferase; SGC,INMT, str | 97.09 | |
| 1g8a_A | 227 | Fibrillarin-like PRE-rRNA processing protein; rRNA | 97.09 | |
| 2vdw_A | 302 | Vaccinia virus capping enzyme D1 subunit; nucleoti | 97.09 | |
| 2h00_A | 254 | Methyltransferase 10 domain containing protein; st | 97.09 | |
| 3a27_A | 272 | TYW2, uncharacterized protein MJ1557; wybutosine m | 97.08 | |
| 3ggd_A | 245 | SAM-dependent methyltransferase; YP_325210.1, stru | 97.07 | |
| 3ajd_A | 274 | Putative methyltransferase MJ0026; tRNA, M5C, ross | 97.05 | |
| 2wa2_A | 276 | Non-structural protein 5; transferase, S-adenosyl- | 97.05 | |
| 2oxt_A | 265 | Nucleoside-2'-O-methyltransferase; flavivirus, vir | 97.04 | |
| 3g07_A | 292 | 7SK snRNA methylphosphate capping enzyme; structur | 97.04 | |
| 3id6_C | 232 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 97.03 | |
| 3tr6_A | 225 | O-methyltransferase; cellular processes; HET: SAH; | 97.03 | |
| 2yxl_A | 450 | PH0851 protein, 450AA long hypothetical FMU protei | 97.02 | |
| 2vdv_E | 246 | TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl | 97.0 | |
| 3bzb_A | 281 | Uncharacterized protein; RED ALGA, protein structu | 97.0 | |
| 3bkx_A | 275 | SAM-dependent methyltransferase; YP_807781.1, cycl | 97.0 | |
| 3fpf_A | 298 | Mtnas, putative uncharacterized protein; thermonic | 96.99 | |
| 3fzg_A | 200 | 16S rRNA methylase; methyltransferase, plasmid, tr | 96.98 | |
| 2oxt_A | 265 | Nucleoside-2'-O-methyltransferase; flavivirus, vir | 96.98 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 96.96 | |
| 3duw_A | 223 | OMT, O-methyltransferase, putative; alternating of | 96.96 | |
| 2fca_A | 213 | TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bac | 96.96 | |
| 1vbf_A | 231 | 231AA long hypothetical protein-L-isoaspartate O- | 96.93 | |
| 3dxy_A | 218 | TRNA (guanine-N(7)-)-methyltransferase; rossmann f | 96.92 | |
| 2esr_A | 177 | Methyltransferase; structural genomics, hypothetic | 96.92 | |
| 3tm4_A | 373 | TRNA (guanine N2-)-methyltransferase TRM14; rossma | 96.89 | |
| 2p41_A | 305 | Type II methyltransferase; vizier, viral enzymes i | 96.87 | |
| 3gdh_A | 241 | Trimethylguanosine synthase homolog; M7G, CAP, dim | 96.87 | |
| 3b3j_A | 480 | Histone-arginine methyltransferase CARM1; protein | 96.83 | |
| 2pwy_A | 258 | TRNA (adenine-N(1)-)-methyltransferase; mtase, ado | 96.83 | |
| 1uir_A | 314 | Polyamine aminopropyltransferase; spermidien synth | 96.82 | |
| 2hnk_A | 239 | SAM-dependent O-methyltransferase; modified rossma | 96.81 | |
| 3sso_A | 419 | Methyltransferase; macrolide, natural product, ros | 96.81 | |
| 3reo_A | 368 | (ISO)eugenol O-methyltransferase; directed evoluti | 96.81 | |
| 3lbf_A | 210 | Protein-L-isoaspartate O-methyltransferase; modifi | 96.79 | |
| 3id6_C | 232 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 96.78 | |
| 3ckk_A | 235 | TRNA (guanine-N(7)-)-methyltransferase; mettl1, S- | 96.78 | |
| 2hnk_A | 239 | SAM-dependent O-methyltransferase; modified rossma | 96.75 | |
| 3cbg_A | 232 | O-methyltransferase; cyanobacterium; HET: SAH FER | 96.75 | |
| 2frx_A | 479 | Hypothetical protein YEBU; rossmann-type S-adenosy | 96.74 | |
| 2ozv_A | 260 | Hypothetical protein ATU0636; structural genomics, | 96.74 | |
| 1iy9_A | 275 | Spermidine synthase; rossmann fold, structural gen | 96.73 | |
| 1ws6_A | 171 | Methyltransferase; structural genomics, riken stru | 96.73 | |
| 2plw_A | 201 | Ribosomal RNA methyltransferase, putative; malaria | 96.72 | |
| 3m6w_A | 464 | RRNA methylase; rRNA methyltransferase, 5-methylcy | 96.7 | |
| 1xj5_A | 334 | Spermidine synthase 1; structural genomics, protei | 96.7 | |
| 1u2z_A | 433 | Histone-lysine N-methyltransferase, H3 lysine-79 s | 96.7 | |
| 1p91_A | 269 | Ribosomal RNA large subunit methyltransferase A; R | 96.7 | |
| 2gpy_A | 233 | O-methyltransferase; structural genomics, PSI, pro | 96.7 | |
| 3b5i_A | 374 | S-adenosyl-L-methionine:salicylic acid carboxyl me | 96.69 | |
| 3mb5_A | 255 | SAM-dependent methyltransferase; RNA methyltransfe | 96.67 | |
| 1ne2_A | 200 | Hypothetical protein TA1320; structural genomics, | 96.67 | |
| 3gjy_A | 317 | Spermidine synthase; APC62791, structural genomics | 96.67 | |
| 3c3p_A | 210 | Methyltransferase; NP_951602.1, structural genomic | 96.66 | |
| 3cbg_A | 232 | O-methyltransferase; cyanobacterium; HET: SAH FER | 96.66 | |
| 3p9n_A | 189 | Possible methyltransferase (methylase); RV2966C, a | 96.66 | |
| 2yvl_A | 248 | TRMI protein, hypothetical protein; tRNA, methyltr | 96.65 | |
| 1inl_A | 296 | Spermidine synthase; beta-barrel, rossman fold, st | 96.65 | |
| 4a6d_A | 353 | Hydroxyindole O-methyltransferase; melatonin, circ | 96.65 | |
| 1fp1_D | 372 | Isoliquiritigenin 2'-O-methyltransferase; protein- | 96.64 | |
| 2i7c_A | 283 | Spermidine synthase; transferase, structural genom | 96.64 | |
| 2wa2_A | 276 | Non-structural protein 5; transferase, S-adenosyl- | 96.62 | |
| 2o07_A | 304 | Spermidine synthase; structural genomics, structur | 96.61 | |
| 1sqg_A | 429 | SUN protein, FMU protein; rossmann-fold, mixed bet | 96.6 | |
| 3dr5_A | 221 | Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 | 96.6 | |
| 2nyu_A | 196 | Putative ribosomal RNA methyltransferase 2; SAM, s | 96.59 | |
| 3v97_A | 703 | Ribosomal RNA large subunit methyltransferase L; Y | 96.58 | |
| 3b3j_A | 480 | Histone-arginine methyltransferase CARM1; protein | 96.57 | |
| 3p9c_A | 364 | Caffeic acid O-methyltransferase; S-adenosylmethio | 96.56 | |
| 1fbn_A | 230 | MJ fibrillarin homologue; MJ proteins, ribosomal R | 96.55 | |
| 3adn_A | 294 | Spermidine synthase; aminopropyltransferase, polya | 96.54 | |
| 1i1n_A | 226 | Protein-L-isoaspartate O-methyltransferase; S-aden | 96.53 | |
| 1yb2_A | 275 | Hypothetical protein TA0852; structural genomics, | 96.53 | |
| 3p2e_A | 225 | 16S rRNA methylase; methyltransferase, transferase | 96.51 | |
| 1sui_A | 247 | Caffeoyl-COA O-methyltransferase; rossmann fold, p | 96.48 | |
| 2b2c_A | 314 | Spermidine synthase; beta-alpha, transferase; 2.50 | 96.46 | |
| 4dmg_A | 393 | Putative uncharacterized protein TTHA1493; rRNA, m | 96.42 | |
| 2pt6_A | 321 | Spermidine synthase; transferase, structural genom | 96.39 | |
| 2ift_A | 201 | Putative methylase HI0767; NESG, Y767_haein, struc | 96.36 | |
| 2avd_A | 229 | Catechol-O-methyltransferase; structural genomics, | 96.35 | |
| 1fp2_A | 352 | Isoflavone O-methyltransferase; protein-product co | 96.35 | |
| 2b78_A | 385 | Hypothetical protein SMU.776; structure genomics, | 96.32 | |
| 1r18_A | 227 | Protein-L-isoaspartate(D-aspartate)-O-methyltrans; | 96.28 | |
| 2cmg_A | 262 | Spermidine synthase; transferase, putrescine amino | 96.26 | |
| 1mjf_A | 281 | Spermidine synthase; spermidine synthetase, struct | 96.23 | |
| 3c3y_A | 237 | Pfomt, O-methyltransferase; plant secondary metabo | 96.23 | |
| 2pbf_A | 227 | Protein-L-isoaspartate O-methyltransferase beta-A | 96.22 | |
| 1nv8_A | 284 | HEMK protein; class I adoMet-dependent methyltrans | 96.21 | |
| 1inl_A | 296 | Spermidine synthase; beta-barrel, rossman fold, st | 96.2 | |
| 2pjd_A | 343 | Ribosomal RNA small subunit methyltransferase C; g | 96.19 | |
| 3adn_A | 294 | Spermidine synthase; aminopropyltransferase, polya | 96.17 | |
| 4dcm_A | 375 | Ribosomal RNA large subunit methyltransferase G; 2 | 96.16 | |
| 1mjf_A | 281 | Spermidine synthase; spermidine synthetase, struct | 96.14 | |
| 2fhp_A | 187 | Methylase, putative; alpha-beta-alpha sandwich, st | 96.13 | |
| 1o54_A | 277 | SAM-dependent O-methyltransferase; TM0748, structu | 96.13 | |
| 1sui_A | 247 | Caffeoyl-COA O-methyltransferase; rossmann fold, p | 96.12 | |
| 2yxe_A | 215 | Protein-L-isoaspartate O-methyltransferase; rossma | 96.1 | |
| 2b25_A | 336 | Hypothetical protein; structural genomics, methyl | 96.08 | |
| 3dmg_A | 381 | Probable ribosomal RNA small subunit methyltransf; | 96.07 | |
| 2avd_A | 229 | Catechol-O-methyltransferase; structural genomics, | 96.07 | |
| 3mq2_A | 218 | 16S rRNA methyltransferase; methyltranferase, ribo | 96.06 | |
| 2xyq_A | 290 | Putative 2'-O-methyl transferase; transferase-vira | 96.06 | |
| 4df3_A | 233 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 96.05 | |
| 2efj_A | 384 | 3,7-dimethylxanthine methyltransferase; SAM-depend | 96.04 | |
| 1iy9_A | 275 | Spermidine synthase; rossmann fold, structural gen | 96.01 | |
| 1zq9_A | 285 | Probable dimethyladenosine transferase; SGC, struc | 95.94 | |
| 2p41_A | 305 | Type II methyltransferase; vizier, viral enzymes i | 95.93 | |
| 2as0_A | 396 | Hypothetical protein PH1915; RNA methyltransferase | 95.92 | |
| 2ld4_A | 176 | Anamorsin; methyltransferase-like fold, alpha/beta | 95.9 | |
| 3htx_A | 950 | HEN1; HEN1, small RNA methyltransferase, protein-R | 95.9 | |
| 3c0k_A | 396 | UPF0064 protein YCCW; PUA domain, adoMet dependent | 95.89 | |
| 1wxx_A | 382 | TT1595, hypothetical protein TTHA1280; thermus the | 95.89 | |
| 1jg1_A | 235 | PIMT;, protein-L-isoaspartate O-methyltransferase; | 95.86 | |
| 4a6d_A | 353 | Hydroxyindole O-methyltransferase; melatonin, circ | 95.86 | |
| 2nyu_A | 196 | Putative ribosomal RNA methyltransferase 2; SAM, s | 95.82 | |
| 3m4x_A | 456 | NOL1/NOP2/SUN family protein; mtase domain, PUA do | 95.82 | |
| 3c3y_A | 237 | Pfomt, O-methyltransferase; plant secondary metabo | 95.82 | |
| 1nv8_A | 284 | HEMK protein; class I adoMet-dependent methyltrans | 95.81 | |
| 3a27_A | 272 | TYW2, uncharacterized protein MJ1557; wybutosine m | 95.81 | |
| 1zg3_A | 358 | Isoflavanone 4'-O-methyltransferase; rossman fold, | 95.79 | |
| 1i9g_A | 280 | Hypothetical protein RV2118C; mtase, adoMet, cryst | 95.78 | |
| 3c0k_A | 396 | UPF0064 protein YCCW; PUA domain, adoMet dependent | 95.77 | |
| 1ixk_A | 315 | Methyltransferase; open beta sheet; 1.90A {Pyrococ | 95.77 | |
| 1o9g_A | 250 | RRNA methyltransferase; antibiotic resistance, Se- | 95.75 | |
| 2igt_A | 332 | SAM dependent methyltransferase; alpha-beta sandwi | 95.74 | |
| 2fpo_A | 202 | Methylase YHHF; structural genomics, putative meth | 95.67 | |
| 3bzb_A | 281 | Uncharacterized protein; RED ALGA, protein structu | 95.65 | |
| 2xyq_A | 290 | Putative 2'-O-methyl transferase; transferase-vira | 95.59 | |
| 3bwc_A | 304 | Spermidine synthase; SAM, SGPP, structura genomics | 95.58 | |
| 1m6e_X | 359 | S-adenosyl-L-methionnine:salicylic acid carboxyl m | 95.58 | |
| 1xj5_A | 334 | Spermidine synthase 1; structural genomics, protei | 95.54 | |
| 3tma_A | 354 | Methyltransferase; thump domain; 2.05A {Thermus th | 95.53 | |
| 1af7_A | 274 | Chemotaxis receptor methyltransferase CHER; chemot | 95.53 | |
| 2qe6_A | 274 | Uncharacterized protein TFU_2867; putative methylt | 95.51 | |
| 4hc4_A | 376 | Protein arginine N-methyltransferase 6; HRMT1L6, S | 95.44 | |
| 1wy7_A | 207 | Hypothetical protein PH1948; seven-stranded beta s | 95.42 | |
| 2pt6_A | 321 | Spermidine synthase; transferase, structural genom | 95.4 | |
| 1wy7_A | 207 | Hypothetical protein PH1948; seven-stranded beta s | 95.36 | |
| 3r3h_A | 242 | O-methyltransferase, SAM-dependent; structural gen | 95.29 | |
| 2yx1_A | 336 | Hypothetical protein MJ0883; methyl transferase, t | 95.19 | |
| 2f8l_A | 344 | Hypothetical protein LMO1582; structural genomics, | 95.15 | |
| 3dou_A | 191 | Ribosomal RNA large subunit methyltransferase J; c | 95.1 | |
| 4dmg_A | 393 | Putative uncharacterized protein TTHA1493; rRNA, m | 95.03 | |
| 1dl5_A | 317 | Protein-L-isoaspartate O-methyltransferase; isoasp | 94.99 | |
| 2b2c_A | 314 | Spermidine synthase; beta-alpha, transferase; 2.50 | 94.76 | |
| 2cmg_A | 262 | Spermidine synthase; transferase, putrescine amino | 94.76 | |
| 2h00_A | 254 | Methyltransferase 10 domain containing protein; st | 94.74 | |
| 1wxx_A | 382 | TT1595, hypothetical protein TTHA1280; thermus the | 94.73 | |
| 1uir_A | 314 | Polyamine aminopropyltransferase; spermidien synth | 94.71 | |
| 1sqg_A | 429 | SUN protein, FMU protein; rossmann-fold, mixed bet | 94.61 | |
| 2jjq_A | 425 | Uncharacterized RNA methyltransferase pyrab10780; | 94.58 | |
| 1yub_A | 245 | Ermam, rRNA methyltransferase; MLS antibiotics; NM | 94.56 | |
| 1u2z_A | 433 | Histone-lysine N-methyltransferase, H3 lysine-79 s | 94.54 | |
| 2o07_A | 304 | Spermidine synthase; structural genomics, structur | 94.47 | |
| 1boo_A | 323 | Protein (N-4 cytosine-specific methyltransferase P | 94.4 | |
| 1ne2_A | 200 | Hypothetical protein TA1320; structural genomics, | 94.39 | |
| 3fzg_A | 200 | 16S rRNA methylase; methyltransferase, plasmid, tr | 94.3 | |
| 1qam_A | 244 | ERMC' methyltransferase; rRNA methyltransferase ER | 94.27 | |
| 2as0_A | 396 | Hypothetical protein PH1915; RNA methyltransferase | 94.25 | |
| 4hc4_A | 376 | Protein arginine N-methyltransferase 6; HRMT1L6, S | 94.18 | |
| 2i7c_A | 283 | Spermidine synthase; transferase, structural genom | 94.03 | |
| 3gjy_A | 317 | Spermidine synthase; APC62791, structural genomics | 93.97 | |
| 2b78_A | 385 | Hypothetical protein SMU.776; structure genomics, | 93.95 | |
| 2f8l_A | 344 | Hypothetical protein LMO1582; structural genomics, | 93.73 | |
| 3k6r_A | 278 | Putative transferase PH0793; structural genomics, | 93.67 | |
| 4gqb_A | 637 | Protein arginine N-methyltransferase 5; TIM barrel | 93.65 | |
| 2yx1_A | 336 | Hypothetical protein MJ0883; methyl transferase, t | 93.63 | |
| 2ih2_A | 421 | Modification methylase TAQI; DNA, DNA methyltransf | 93.52 | |
| 3kr9_A | 225 | SAM-dependent methyltransferase; class I rossmann- | 93.47 | |
| 3ajd_A | 274 | Putative methyltransferase MJ0026; tRNA, M5C, ross | 93.25 | |
| 2h1r_A | 299 | Dimethyladenosine transferase, putative; SGC toron | 93.16 | |
| 3frh_A | 253 | 16S rRNA methylase; methyltransferase domain, heli | 93.05 | |
| 1uwv_A | 433 | 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA m | 93.05 | |
| 3b5i_A | 374 | S-adenosyl-L-methionine:salicylic acid carboxyl me | 92.97 | |
| 2zig_A | 297 | TTHA0409, putative modification methylase; methylt | 92.86 | |
| 3lec_A | 230 | NADB-rossmann superfamily protein; PSI, MCSG, stru | 92.86 | |
| 3k6r_A | 278 | Putative transferase PH0793; structural genomics, | 92.75 | |
| 3lec_A | 230 | NADB-rossmann superfamily protein; PSI, MCSG, stru | 92.37 | |
| 2frx_A | 479 | Hypothetical protein YEBU; rossmann-type S-adenosy | 92.04 | |
| 2yxl_A | 450 | PH0851 protein, 450AA long hypothetical FMU protei | 91.75 | |
| 1uwv_A | 433 | 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA m | 91.69 | |
| 3gnl_A | 244 | Uncharacterized protein, DUF633, LMOF2365_1472; st | 91.67 | |
| 2qm3_A | 373 | Predicted methyltransferase; putative methyltransf | 91.64 | |
| 3lcv_B | 281 | Sisomicin-gentamicin resistance methylase SGM; ant | 91.53 | |
| 2okc_A | 445 | Type I restriction enzyme stysji M protein; NP_813 | 91.41 | |
| 2qfm_A | 364 | Spermine synthase; spermidine aminopropyltransfera | 91.18 | |
| 1zq9_A | 285 | Probable dimethyladenosine transferase; SGC, struc | 91.06 | |
| 3lcv_B | 281 | Sisomicin-gentamicin resistance methylase SGM; ant | 90.75 | |
| 3uwp_A | 438 | Histone-lysine N-methyltransferase, H3 lysine-79; | 90.59 | |
| 3gnl_A | 244 | Uncharacterized protein, DUF633, LMOF2365_1472; st | 90.58 | |
| 3evf_A | 277 | RNA-directed RNA polymerase NS5; NS5 methyltransfe | 90.09 | |
| 3kr9_A | 225 | SAM-dependent methyltransferase; class I rossmann- | 89.99 |
| >4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans} | Back alignment and structure |
|---|
Probab=99.08 E-value=4.8e-11 Score=117.61 Aligned_cols=87 Identities=17% Similarity=0.184 Sum_probs=69.3
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDR 222 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~R 222 (527)
.|.++..|..++..+..+ |.+++|++.|+++ ..+.+.+++++.+||++++||+|+|+.++ ||.+... ++.|+.|
T Consensus 50 tG~~~~~l~~~~~~v~gv---D~s~~ml~~a~~~-~~v~~~~~~~e~~~~~~~sfD~v~~~~~~-h~~~~~~-~~~e~~r 123 (257)
T 4hg2_A 50 SGQASLGLAEFFERVHAV---DPGEAQIRQALRH-PRVTYAVAPAEDTGLPPASVDVAIAAQAM-HWFDLDR-FWAELRR 123 (257)
T ss_dssp TTTTHHHHHTTCSEEEEE---ESCHHHHHTCCCC-TTEEEEECCTTCCCCCSSCEEEEEECSCC-TTCCHHH-HHHHHHH
T ss_pred CCHHHHHHHHhCCEEEEE---eCcHHhhhhhhhc-CCceeehhhhhhhcccCCcccEEEEeeeh-hHhhHHH-HHHHHHH
Confidence 445555666666544444 7889999988653 34677889999999999999999999998 7776655 9999999
Q ss_pred cccCCcEEEEecC
Q 009719 223 LLRPGGYLVISGP 235 (527)
Q Consensus 223 VLRPGG~lviS~p 235 (527)
||||||.|++...
T Consensus 124 vLkpgG~l~~~~~ 136 (257)
T 4hg2_A 124 VARPGAVFAAVTY 136 (257)
T ss_dssp HEEEEEEEEEEEE
T ss_pred HcCCCCEEEEEEC
Confidence 9999999998764
|
| >3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=98.98 E-value=7.9e-10 Score=101.72 Aligned_cols=119 Identities=10% Similarity=0.022 Sum_probs=88.1
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCccccccc-ChHHHHHHHh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA-YNATYLIEVD 221 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d-~~~~aL~Ei~ 221 (527)
.|.++.+|..++..+..+ |.++.+++.|+++...+.+.++|...+|+++++||+|+|..+++|+.. +...+|.++.
T Consensus 52 ~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~ 128 (203)
T 3h2b_A 52 TGRWTGHLASLGHQIEGL---EPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALR 128 (203)
T ss_dssp TCHHHHHHHHTTCCEEEE---CCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHH
T ss_pred CCHHHHHHHhcCCeEEEE---eCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHH
Confidence 344555666666543333 788999999999876778888999999999999999999999999873 3345999999
Q ss_pred hcccCCcEEEEecCCCCCCC---------chhHHHHHHHHHHhcceEEeeee
Q 009719 222 RLLRPGGYLVISGPPVQWPK---------QDKEWADLQAVARALCYELIAVD 264 (527)
Q Consensus 222 RVLRPGG~lviS~pp~~~~~---------~~~~w~~i~~l~~~mcW~~~~~~ 264 (527)
|+|||||+++++.+...... ....-+.+.++.+...|+.+...
T Consensus 129 ~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 180 (203)
T 3h2b_A 129 MAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSH 180 (203)
T ss_dssp HTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEE
T ss_pred HHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEE
Confidence 99999999999875321100 01134567777777778776543
|
| >1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=98.98 E-value=3.4e-10 Score=108.47 Aligned_cols=88 Identities=18% Similarity=0.250 Sum_probs=69.1
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLI 218 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~ 218 (527)
|.++..|..++. .+...|.++.|++.|+++ +.+ +.+.++|++.+||++++||+|+|..+++|+.+... +|.
T Consensus 49 G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l~~~~d~~~-~l~ 124 (260)
T 1vl5_A 49 GHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAAHHFPNPAS-FVS 124 (260)
T ss_dssp CHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCGGGCSCHHH-HHH
T ss_pred CHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhhhHhcCCHHH-HHH
Confidence 444445555554 344447888999988765 444 66788999999999999999999999999887665 999
Q ss_pred HHhhcccCCcEEEEecC
Q 009719 219 EVDRLLRPGGYLVISGP 235 (527)
Q Consensus 219 Ei~RVLRPGG~lviS~p 235 (527)
|+.|+|||||+|+++.+
T Consensus 125 ~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 125 EAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp HHHHHEEEEEEEEEEEE
T ss_pred HHHHHcCCCCEEEEEEc
Confidence 99999999999999754
|
| >2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A | Back alignment and structure |
|---|
Probab=98.96 E-value=1.6e-09 Score=101.25 Aligned_cols=89 Identities=15% Similarity=0.065 Sum_probs=71.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCC-CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVD 221 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~ 221 (527)
.|.++..|..++.. +...|.++.+++.|+++.. .+.+.++|.+.+ +++++||+|+|..+++|+.+... +|+|+.
T Consensus 53 ~G~~~~~l~~~~~~---v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~~~~~-~l~~~~ 127 (250)
T 2p7i_A 53 KGDFTSRLQEHFND---ITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHIDDPVA-LLKRIN 127 (250)
T ss_dssp TSHHHHHHTTTCSC---EEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGCSSHHH-HHHHHH
T ss_pred CCHHHHHHHHhCCc---EEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhhcCHHH-HHHHHH
Confidence 34555566666543 3334788999999998754 466777888888 67899999999999999977655 999999
Q ss_pred -hcccCCcEEEEecCC
Q 009719 222 -RLLRPGGYLVISGPP 236 (527)
Q Consensus 222 -RVLRPGG~lviS~pp 236 (527)
|+|||||+++++.|.
T Consensus 128 ~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 128 DDWLAEGGRLFLVCPN 143 (250)
T ss_dssp HTTEEEEEEEEEEEEC
T ss_pred HHhcCCCCEEEEEcCC
Confidence 999999999999874
|
| >3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=98.93 E-value=2e-09 Score=101.28 Aligned_cols=129 Identities=16% Similarity=0.122 Sum_probs=92.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC--CCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG--IPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEV 220 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg--~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei 220 (527)
.|.++..|..++..+..+ |.++.+++.|+++. ..+.+.++|...+|+++++||+|+|..+++|+.+... +|.++
T Consensus 64 ~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~~~ 139 (242)
T 3l8d_A 64 DGYGTYKLSRTGYKAVGV---DISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTEEPLR-ALNEI 139 (242)
T ss_dssp TSHHHHHHHHTTCEEEEE---ESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSSCHHH-HHHHH
T ss_pred CCHHHHHHHHcCCeEEEE---ECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhccCHHH-HHHHH
Confidence 455555666776644444 78899999998873 3466788899999999999999999999999866555 99999
Q ss_pred hhcccCCcEEEEecCCCCCCCch---------------hHHHHHHHHHHhcceEEeeeecceEEEeCCCcccc
Q 009719 221 DRLLRPGGYLVISGPPVQWPKQD---------------KEWADLQAVARALCYELIAVDGNTVIWKKPVGESC 278 (527)
Q Consensus 221 ~RVLRPGG~lviS~pp~~~~~~~---------------~~w~~i~~l~~~mcW~~~~~~~~v~iwrKp~~~~c 278 (527)
.|+|||||+++++.+........ ..-..++++.+...++.+.. ..+|........
T Consensus 140 ~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~---~~~~~~~~~~~~ 209 (242)
T 3l8d_A 140 KRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDG---IGVYKRGVNEKM 209 (242)
T ss_dssp HHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEE---EEEECTTCCHHH
T ss_pred HHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEe---ecccccCccHHH
Confidence 99999999999987421110000 11235677777777887754 345666555433
|
| >2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A | Back alignment and structure |
|---|
Probab=98.93 E-value=5.5e-10 Score=101.16 Aligned_cols=72 Identities=24% Similarity=0.259 Sum_probs=62.2
Q ss_pred CcChHHHHHHHHHcCC-CcEEeeccccCCCC---CCCcccEEEecCccccc-ccChHHHHHHHhhcccCCcEEEEecC
Q 009719 163 RDSHKAQIQFALERGI-PAFVAMLGTRRLPF---PAFSFDIVHCSRCLIPF-TAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 163 ~D~seaqvq~A~eRg~-pa~~~v~dae~LPF---pD~SFDlV~cs~~l~hw-~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.|.++.|++.|+++.. ...+.++|++.+|+ ++++||+|+|+.+++|+ .+... +|+|+.|+|||||+|++..|
T Consensus 26 vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~-~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 26 VEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAE-ILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp HHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCCHH-HHHHHHHHEEEEEEEEEEEE
T ss_pred eeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhhhcccCHHH-HHHHHHHHCCCCEEEEEEcc
Confidence 5889999999998742 36777889999998 89999999999999887 55544 99999999999999999765
|
| >2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.87 E-value=2.3e-09 Score=99.12 Aligned_cols=75 Identities=29% Similarity=0.336 Sum_probs=64.8
Q ss_pred ccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCC
Q 009719 161 APRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 161 Ap~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
...|.++.+++.|+++.....+.+++.+.+|+++++||+|+|..+++|+.+... +|.|+.|+|||||+++++.++
T Consensus 60 ~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 60 VGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVEDVER-VLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp EEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSCHHH-HHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcCCHHH-HHHHHHHHcCCCCEEEEEecC
Confidence 334778899999998864567778899999999999999999999988876555 999999999999999999874
|
| >2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A | Back alignment and structure |
|---|
Probab=98.86 E-value=2.6e-09 Score=101.38 Aligned_cols=87 Identities=18% Similarity=0.208 Sum_probs=69.4
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC----CCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG----IPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLI 218 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg----~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~ 218 (527)
.|.++..|..++..+ ...|.++.|++.|+++. ..+.+.++|.+.+||++++||+|+|..+++|+.+... +|.
T Consensus 50 ~G~~~~~l~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~ 125 (263)
T 2yqz_A 50 TGRIALPLIARGYRY---IALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHLVPDWPK-VLA 125 (263)
T ss_dssp TSTTHHHHHTTTCEE---EEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGGCTTHHH-HHH
T ss_pred CCHHHHHHHHCCCEE---EEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchhhcCCHHH-HHH
Confidence 344555566666543 33478899999998872 3466788899999999999999999999977765554 999
Q ss_pred HHhhcccCCcEEEEe
Q 009719 219 EVDRLLRPGGYLVIS 233 (527)
Q Consensus 219 Ei~RVLRPGG~lviS 233 (527)
|+.|+|||||+++++
T Consensus 126 ~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 126 EAIRVLKPGGALLEG 140 (263)
T ss_dssp HHHHHEEEEEEEEEE
T ss_pred HHHHHCCCCcEEEEE
Confidence 999999999999997
|
| >2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 | Back alignment and structure |
|---|
Probab=98.84 E-value=1.4e-09 Score=106.15 Aligned_cols=88 Identities=16% Similarity=0.208 Sum_probs=69.0
Q ss_pred hccccccccC-CeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 144 ASFGGSMLSE-NILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 144 gsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
|.++..|..+ +.. +...|.++.|++.|+++ |+ .+.+.++|...+||++++||+|+|..+++|+.+... +
T Consensus 94 G~~~~~l~~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~ 169 (297)
T 2o57_A 94 GGAARFLVRKFGVS---IDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLK-V 169 (297)
T ss_dssp SHHHHHHHHHHCCE---EEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSCHHH-H
T ss_pred CHHHHHHHHHhCCE---EEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchhhhcCCHHH-H
Confidence 3344444444 443 33347788899888764 44 367788899999999999999999999999987554 9
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
|.|+.|+|||||+|+++.+
T Consensus 170 l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 170 FQECARVLKPRGVMAITDP 188 (297)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCeEEEEEEe
Confidence 9999999999999999876
|
| >3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=1.6e-09 Score=102.90 Aligned_cols=89 Identities=16% Similarity=0.162 Sum_probs=70.2
Q ss_pred hhccccccccC-CeeEEeeccCcChHHHHHHHHHcC---CCcEEeeccccCCCCCCCcccEEEecCccccc--ccChHHH
Q 009719 143 VASFGGSMLSE-NILTLSFAPRDSHKAQIQFALERG---IPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPF--TAYNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eRg---~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw--~d~~~~a 216 (527)
.|.++.+|..+ +.. +...|.++.+++.|+++. ..+.+.++|...+|+++++||+|+|..+++|+ .+.. .+
T Consensus 66 ~G~~~~~l~~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~-~~ 141 (266)
T 3ujc_A 66 LGGGCMYINEKYGAH---THGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAILALSLENKN-KL 141 (266)
T ss_dssp TSHHHHHHHHHHCCE---EEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGGGSCHHHHH-HH
T ss_pred CCHHHHHHHHHcCCE---EEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHHhcChHHHH-HH
Confidence 34444455554 443 333377899999999885 34667888999999999999999999999998 4444 49
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
|.|+.|+|||||+++++.+
T Consensus 142 l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 142 FQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCCEEEEEEe
Confidence 9999999999999999875
|
| >1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=2.3e-09 Score=102.11 Aligned_cols=88 Identities=22% Similarity=0.273 Sum_probs=69.0
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLI 218 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~ 218 (527)
|.++..|..++.. +...|.++.+++.|+++ +.+ ..+.++|.+.+||++++||+|+|..+++|+.+... +|.
T Consensus 33 G~~~~~l~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~ 108 (239)
T 1xxl_A 33 GHTALAFSPYVQE---CIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAAHHFSDVRK-AVR 108 (239)
T ss_dssp SHHHHHHGGGSSE---EEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCGGGCSCHHH-HHH
T ss_pred CHHHHHHHHhCCE---EEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCchhhccCHHH-HHH
Confidence 4444455555543 33447788888888754 444 56778899999999999999999999999986655 999
Q ss_pred HHhhcccCCcEEEEecC
Q 009719 219 EVDRLLRPGGYLVISGP 235 (527)
Q Consensus 219 Ei~RVLRPGG~lviS~p 235 (527)
|+.|+|||||+++++.+
T Consensus 109 ~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 109 EVARVLKQDGRFLLVDH 125 (239)
T ss_dssp HHHHHEEEEEEEEEEEE
T ss_pred HHHHHcCCCcEEEEEEc
Confidence 99999999999999765
|
| >3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=98.83 E-value=2.5e-09 Score=101.89 Aligned_cols=90 Identities=10% Similarity=0.018 Sum_probs=72.4
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC--CCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG--IPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEV 220 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg--~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei 220 (527)
.|.++.+|..++.. .+...|.++.+++.|+++. ..+.+.++|.+.+|+++++||+|+|..+++|+.+... +|.++
T Consensus 55 ~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~~~ 131 (253)
T 3g5l_A 55 FGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIASFDD-ICKKV 131 (253)
T ss_dssp TCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGCSCHHH-HHHHH
T ss_pred CCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhhhhHHH-HHHHH
Confidence 35555566666652 3344478899999999875 3467788899999999999999999999988865554 99999
Q ss_pred hhcccCCcEEEEecC
Q 009719 221 DRLLRPGGYLVISGP 235 (527)
Q Consensus 221 ~RVLRPGG~lviS~p 235 (527)
.|+|||||+|+++.+
T Consensus 132 ~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 132 YINLKSSGSFIFSVE 146 (253)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHcCCCcEEEEEeC
Confidence 999999999999865
|
| >1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36 | Back alignment and structure |
|---|
Probab=98.83 E-value=1.1e-09 Score=102.73 Aligned_cols=86 Identities=7% Similarity=-0.062 Sum_probs=65.8
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcC-----------------CCcEEeeccccCCCCCC-CcccEEEecCc
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERG-----------------IPAFVAMLGTRRLPFPA-FSFDIVHCSRC 205 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg-----------------~pa~~~v~dae~LPFpD-~SFDlV~cs~~ 205 (527)
|.++.+|.++|..+..+ |.|+.|++.|+++. ..+.+.++|...+|+++ ++||+|+|..+
T Consensus 34 G~~~~~la~~g~~V~gv---D~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~fD~v~~~~~ 110 (203)
T 1pjz_A 34 SQDMSWLSGQGYHVVGA---ELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGHCAAFYDRAA 110 (203)
T ss_dssp SHHHHHHHHHCCEEEEE---EECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHSEEEEEEESC
T ss_pred cHhHHHHHHCCCeEEEE---eCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCCEEEEEECcc
Confidence 44445566666543333 88899999998762 24678889999999987 89999999988
Q ss_pred ccccccCh-HHHHHHHhhcccCCcEEEE
Q 009719 206 LIPFTAYN-ATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 206 l~hw~d~~-~~aL~Ei~RVLRPGG~lvi 232 (527)
++|++... ..++.|+.|+|||||++++
T Consensus 111 l~~l~~~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 111 MIALPADMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp GGGSCHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred hhhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 88876543 3489999999999998444
|
| >3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.83 E-value=2.2e-09 Score=98.53 Aligned_cols=89 Identities=16% Similarity=0.225 Sum_probs=69.3
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYL 217 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL 217 (527)
|.++..|..+ ....+...|.++.+++.|+++ ++ .+.+.++|...+||++++||+|+|..+++|+.+... +|
T Consensus 55 G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~-~l 131 (219)
T 3dlc_A 55 GALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWEDVAT-AF 131 (219)
T ss_dssp SHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGCSCHHH-HH
T ss_pred CHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhhccCHHH-HH
Confidence 4444455554 122444457888999988876 43 366788899999999999999999999999865555 99
Q ss_pred HHHhhcccCCcEEEEecC
Q 009719 218 IEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~p 235 (527)
.|+.|+|||||+++++.+
T Consensus 132 ~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 132 REIYRILKSGGKTYIGGG 149 (219)
T ss_dssp HHHHHHEEEEEEEEEEEC
T ss_pred HHHHHhCCCCCEEEEEec
Confidence 999999999999999864
|
| >3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.82 E-value=1e-08 Score=95.06 Aligned_cols=100 Identities=16% Similarity=0.205 Sum_probs=74.2
Q ss_pred CcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCCC
Q 009719 163 RDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPV 237 (527)
Q Consensus 163 ~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp~ 237 (527)
.|.++.+++.|+++ +++ +.+..+|...+|+++++||+|+|+.+++|+.+... +|.|+.|+|||||+++++....
T Consensus 68 vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~~~~~~LkpgG~l~i~~~~~ 146 (219)
T 3dh0_A 68 IDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFTFHELSEPLK-FLEELKRVAKPFAYLAIIDWKK 146 (219)
T ss_dssp EESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESCGGGCSSHHH-HHHHHHHHEEEEEEEEEEEECS
T ss_pred EECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehhhhhcCCHHH-HHHHHHHHhCCCeEEEEEEecc
Confidence 37778888888765 443 66788899999999999999999999999876555 9999999999999999976421
Q ss_pred CC--CC----chhHHHHHHHHHHhcceEEeee
Q 009719 238 QW--PK----QDKEWADLQAVARALCYELIAV 263 (527)
Q Consensus 238 ~~--~~----~~~~w~~i~~l~~~mcW~~~~~ 263 (527)
.. .. .....+.++++.+...|+.+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 178 (219)
T 3dh0_A 147 EERDKGPPPEEVYSEWEVGLILEDAGIRVGRV 178 (219)
T ss_dssp SCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEE
T ss_pred cccccCCchhcccCHHHHHHHHHHCCCEEEEE
Confidence 11 00 1112455667777777776543
|
| >3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.80 E-value=1.9e-09 Score=102.29 Aligned_cols=88 Identities=18% Similarity=0.157 Sum_probs=69.3
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCC--CCCCCcccEEEecCcccccccCh-HHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRL--PFPAFSFDIVHCSRCLIPFTAYN-ATYLIE 219 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~L--PFpD~SFDlV~cs~~l~hw~d~~-~~aL~E 219 (527)
.|.++.+|..++..+.. .|.++.|++.|+++ ..+..+|...+ ||++++||+|+|..+++|+.+.. ..+|.|
T Consensus 52 ~G~~~~~l~~~~~~v~g---vD~s~~~~~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~ 125 (240)
T 3dli_A 52 RGEFLELCKEEGIESIG---VDINEDMIKFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPERLFELLSL 125 (240)
T ss_dssp TTHHHHHHHHHTCCEEE---ECSCHHHHHHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGGGHHHHHHH
T ss_pred CCHHHHHHHhCCCcEEE---EECCHHHHHHHHhh---cceeeccHHHHhhhcCCCCeeEEEECCchhhCCcHHHHHHHHH
Confidence 34555555666654433 38889999999887 55666777665 99999999999999999998542 349999
Q ss_pred HhhcccCCcEEEEecCC
Q 009719 220 VDRLLRPGGYLVISGPP 236 (527)
Q Consensus 220 i~RVLRPGG~lviS~pp 236 (527)
+.|+|||||+++++.+.
T Consensus 126 ~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 126 CYSKMKYSSYIVIESPN 142 (240)
T ss_dssp HHHHBCTTCCEEEEEEC
T ss_pred HHHHcCCCcEEEEEeCC
Confidence 99999999999999874
|
| >1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 | Back alignment and structure |
|---|
Probab=98.80 E-value=3.8e-09 Score=100.35 Aligned_cols=71 Identities=17% Similarity=0.194 Sum_probs=60.8
Q ss_pred CcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 163 RDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 163 ~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.|.++.+++.|+++ |+. +.+.++|++.+|+ +++||+|+|..+++|+.+... +|.|+.|+|||||+++++.+
T Consensus 65 vD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~~~~~~~~~~~~-~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 65 IDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAACVGATWIAGGFAG-AEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEESCGGGTSSSHH-HHHHHTTSEEEEEEEEEEEE
T ss_pred EeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEECCChHhcCCHHH-HHHHHHHHcCCCeEEEEecC
Confidence 37788888888754 543 6778899999999 899999999999988887665 99999999999999999875
|
| >3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.4e-08 Score=94.27 Aligned_cols=89 Identities=13% Similarity=0.132 Sum_probs=71.3
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCC-CcEEeeccccCCCCCCCcccEEEecCcccccccChH-HHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA-TYLIEV 220 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~-~aL~Ei 220 (527)
.|.++..|..++..+. ..|.++.+++.|+++.. .+.+..+|...+|++ ++||+|+|..+++|+.+... .+|.|+
T Consensus 56 ~G~~~~~l~~~~~~v~---~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~ 131 (220)
T 3hnr_A 56 TGNLTNKLLLAGRTVY---GIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTYAFHHLTDDEKNVAIAKY 131 (220)
T ss_dssp TSHHHHHHHHTTCEEE---EECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEESCGGGSCHHHHHHHHHHH
T ss_pred CCHHHHHHHhCCCeEE---EEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECcchhcCChHHHHHHHHHH
Confidence 3455556666665444 44888999999998754 466778899999999 99999999999988876542 389999
Q ss_pred hhcccCCcEEEEecC
Q 009719 221 DRLLRPGGYLVISGP 235 (527)
Q Consensus 221 ~RVLRPGG~lviS~p 235 (527)
.|+|||||+++++.+
T Consensus 132 ~~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 132 SQLLNKGGKIVFADT 146 (220)
T ss_dssp HHHSCTTCEEEEEEE
T ss_pred HHhcCCCCEEEEEec
Confidence 999999999999975
|
| >2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=98.79 E-value=4.3e-09 Score=101.41 Aligned_cols=90 Identities=20% Similarity=0.316 Sum_probs=72.1
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDR 222 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~R 222 (527)
.|.++..|..++.. +...|.++.+++.|+++... .+.++|.+.+|+++++||+|+|..++.|+..+...+|.|+.|
T Consensus 65 ~G~~~~~l~~~~~~---v~gvD~s~~~l~~a~~~~~~-~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~ 140 (260)
T 2avn_A 65 TGKWSLFLQERGFE---VVLVDPSKEMLEVAREKGVK-NVVEAKAEDLPFPSGAFEAVLALGDVLSYVENKDKAFSEIRR 140 (260)
T ss_dssp TCHHHHHHHTTTCE---EEEEESCHHHHHHHHHHTCS-CEEECCTTSCCSCTTCEEEEEECSSHHHHCSCHHHHHHHHHH
T ss_pred cCHHHHHHHHcCCe---EEEEeCCHHHHHHHHhhcCC-CEEECcHHHCCCCCCCEEEEEEcchhhhccccHHHHHHHHHH
Confidence 34455566666654 33448889999999988653 377789999999999999999998888986556669999999
Q ss_pred cccCCcEEEEecCC
Q 009719 223 LLRPGGYLVISGPP 236 (527)
Q Consensus 223 VLRPGG~lviS~pp 236 (527)
+|||||+++++.+.
T Consensus 141 ~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 141 VLVPDGLLIATVDN 154 (260)
T ss_dssp HEEEEEEEEEEEEB
T ss_pred HcCCCeEEEEEeCC
Confidence 99999999998873
|
| >3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} | Back alignment and structure |
|---|
Probab=98.78 E-value=4.5e-09 Score=100.97 Aligned_cols=75 Identities=28% Similarity=0.375 Sum_probs=63.2
Q ss_pred eccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEe
Q 009719 160 FAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 160 iAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS 233 (527)
+...|.++.+++.|+++ +++ ..+..+|...+||++++||+|+|..+++|+.+... +|.|+.|+|||||+++++
T Consensus 87 v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~~~~~~L~pgG~l~i~ 165 (273)
T 3bus_A 87 VTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLHHMPDRGR-ALREMARVLRPGGTVAIA 165 (273)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSCHHH-HHHHHHTTEEEEEEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhhhCCCHHH-HHHHHHHHcCCCeEEEEE
Confidence 33347788899888765 443 66778899999999999999999999999877655 999999999999999998
Q ss_pred cC
Q 009719 234 GP 235 (527)
Q Consensus 234 ~p 235 (527)
.+
T Consensus 166 ~~ 167 (273)
T 3bus_A 166 DF 167 (273)
T ss_dssp EE
T ss_pred Ee
Confidence 75
|
| >3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.77 E-value=4.4e-09 Score=102.14 Aligned_cols=87 Identities=15% Similarity=0.122 Sum_probs=69.3
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhc
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRL 223 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RV 223 (527)
|.++..|...+..+..+ |.++.|++.|+++...+.+.++|++.+|+ +++||+|+|..+++|+.+... +|.|+.|+
T Consensus 69 G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~~~d~~~-~l~~~~~~ 143 (279)
T 3ccf_A 69 GQLTEKIAQSGAEVLGT---DNAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNAMLHWVKEPEA-AIASIHQA 143 (279)
T ss_dssp SHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEESCGGGCSCHHH-HHHHHHHH
T ss_pred CHHHHHHHhCCCeEEEE---ECCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEcchhhhCcCHHH-HHHHHHHh
Confidence 44444555555543333 77899999999886556778889999998 689999999999988776555 99999999
Q ss_pred ccCCcEEEEecC
Q 009719 224 LRPGGYLVISGP 235 (527)
Q Consensus 224 LRPGG~lviS~p 235 (527)
|||||+++++.+
T Consensus 144 LkpgG~l~~~~~ 155 (279)
T 3ccf_A 144 LKSGGRFVAEFG 155 (279)
T ss_dssp EEEEEEEEEEEE
T ss_pred cCCCcEEEEEec
Confidence 999999999876
|
| >2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.77 E-value=4.2e-09 Score=99.99 Aligned_cols=70 Identities=20% Similarity=0.164 Sum_probs=61.5
Q ss_pred cChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++.|++.|+++.....+.++|.+.+| ++++||+|+|+.+++|+.+... +|.|+.|+|||||+++++.+
T Consensus 64 D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~-~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 64 DSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAVFQWVPDHLA-VLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp ESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESCGGGSTTHHH-HHHHHGGGEEEEEEEEEEEE
T ss_pred ECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCchhhCCCHHH-HHHHHHHhcCCCeEEEEEeC
Confidence 7788999999988656778888999999 8999999999999977765554 99999999999999999986
|
| >3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=98.76 E-value=6.2e-09 Score=97.68 Aligned_cols=90 Identities=20% Similarity=0.139 Sum_probs=71.1
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCC--CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEV 220 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei 220 (527)
.|.++..|..++.. .+...|.++.+++.|+++.. .+.+..+|...+|+++++||+|+|+.+++|+.+... +|.++
T Consensus 54 ~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~~~ 130 (243)
T 3bkw_A 54 FGWFCRWAHEHGAS--YVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYVEDVAR-LFRTV 130 (243)
T ss_dssp TCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGGCSCHHH-HHHHH
T ss_pred CCHHHHHHHHCCCC--eEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEeccccccchHHH-HHHHH
Confidence 34455566666651 23333778999999998754 356777899999999999999999999988876554 99999
Q ss_pred hhcccCCcEEEEecC
Q 009719 221 DRLLRPGGYLVISGP 235 (527)
Q Consensus 221 ~RVLRPGG~lviS~p 235 (527)
.|+|||||+++++.+
T Consensus 131 ~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 131 HQALSPGGHFVFSTE 145 (243)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHhcCcCcEEEEEeC
Confidence 999999999999876
|
| >2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=3.4e-09 Score=104.16 Aligned_cols=74 Identities=15% Similarity=0.028 Sum_probs=58.6
Q ss_pred ccCcChHHHHHHHHHc-----CCCc---EEeeccccCCC------CCCCcccEEEecCcccccccChHHHHHHHhhcccC
Q 009719 161 APRDSHKAQIQFALER-----GIPA---FVAMLGTRRLP------FPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRP 226 (527)
Q Consensus 161 Ap~D~seaqvq~A~eR-----g~pa---~~~v~dae~LP------FpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRP 226 (527)
...|.++.|++.|+++ +++. .+..++++.++ |++++||+|+|+.+++|+.+... +|+|+.|+|||
T Consensus 86 ~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~-~l~~~~r~Lkp 164 (292)
T 2aot_A 86 EVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPA-TLKFFHSLLGT 164 (292)
T ss_dssp EEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCHHH-HHHHHHHTEEE
T ss_pred EEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccCCCceeEEEEeeeeeecCCHHH-HHHHHHHHcCC
Confidence 4448899999999876 3332 23445565554 78999999999999988877665 99999999999
Q ss_pred CcEEEEecC
Q 009719 227 GGYLVISGP 235 (527)
Q Consensus 227 GG~lviS~p 235 (527)
||+|++..+
T Consensus 165 gG~l~i~~~ 173 (292)
T 2aot_A 165 NAKMLIIVV 173 (292)
T ss_dssp EEEEEEEEE
T ss_pred CcEEEEEEe
Confidence 999999864
|
| >3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.73 E-value=4.9e-09 Score=101.25 Aligned_cols=87 Identities=15% Similarity=0.161 Sum_probs=70.1
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDR 222 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~R 222 (527)
.|.++..|.+.+..+..+ |.++.|++.|+++. .+.+.++|++.+||++++||+|+|..+++|+.+... +|+|+.|
T Consensus 45 ~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~~~~~ 119 (261)
T 3ege_A 45 TGGYSVALANQGLFVYAV---EPSIVMRQQAVVHP-QVEWFTGYAENLALPDKSVDGVISILAIHHFSHLEK-SFQEMQR 119 (261)
T ss_dssp TSHHHHHHHTTTCEEEEE---CSCHHHHHSSCCCT-TEEEECCCTTSCCSCTTCBSEEEEESCGGGCSSHHH-HHHHHHH
T ss_pred ccHHHHHHHhCCCEEEEE---eCCHHHHHHHHhcc-CCEEEECchhhCCCCCCCEeEEEEcchHhhccCHHH-HHHHHHH
Confidence 455555666666544444 88889998887665 677888999999999999999999999999966655 9999999
Q ss_pred cccCCcEEEEecC
Q 009719 223 LLRPGGYLVISGP 235 (527)
Q Consensus 223 VLRPGG~lviS~p 235 (527)
+|| ||++++..+
T Consensus 120 ~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 120 IIR-DGTIVLLTF 131 (261)
T ss_dssp HBC-SSCEEEEEE
T ss_pred HhC-CcEEEEEEc
Confidence 999 998888664
|
| >3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.8e-08 Score=93.53 Aligned_cols=94 Identities=21% Similarity=0.265 Sum_probs=72.9
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC----C------CcEEeeccccCCCCCCCcccEEEecCcccccccC
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG----I------PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY 212 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg----~------pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~ 212 (527)
.|.++..|..++..+. ..|.++.+++.|+++. + ...+..++...+|+++++||+|+|+.+++|+.+.
T Consensus 41 ~G~~~~~l~~~~~~v~---~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~ 117 (235)
T 3sm3_A 41 SGKISLELASKGYSVT---GIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQAFLTSVPDP 117 (235)
T ss_dssp TSHHHHHHHHTTCEEE---EEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEESCGGGCCCH
T ss_pred CCHHHHHHHhCCCeEE---EEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEcchhhcCCCH
Confidence 4555556666665433 3488899999998753 2 2456778999999999999999999999998765
Q ss_pred hH--HHHHHHhhcccCCcEEEEecCCCCC
Q 009719 213 NA--TYLIEVDRLLRPGGYLVISGPPVQW 239 (527)
Q Consensus 213 ~~--~aL~Ei~RVLRPGG~lviS~pp~~~ 239 (527)
.. .+|.++.|+|||||+++++.+...+
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (235)
T 3sm3_A 118 KERSRIIKEVFRVLKPGAYLYLVEFGQNW 146 (235)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEBCCT
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEECCcch
Confidence 51 4999999999999999998764443
|
| >3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=6.2e-09 Score=98.94 Aligned_cols=88 Identities=14% Similarity=0.141 Sum_probs=67.0
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYL 217 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL 217 (527)
|.++..|..+.-. .+...|.++.+++.|+++ |++ +.+..+|.+.+||++++||+|+|..+++|+ +.. .+|
T Consensus 58 G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~-~~l 133 (257)
T 3f4k_A 58 GGQTLFLADYVKG--QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIYNI-GFE-RGM 133 (257)
T ss_dssp SHHHHHHHHHCCS--EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCSCCC-CHH-HHH
T ss_pred CHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChHhhc-CHH-HHH
Confidence 4444444444321 333447788888888765 444 667888999999999999999999999887 444 499
Q ss_pred HHHhhcccCCcEEEEecC
Q 009719 218 IEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~p 235 (527)
.++.|+|||||+++++.+
T Consensus 134 ~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 134 NEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp HHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHcCCCcEEEEEEe
Confidence 999999999999999875
|
| >4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.71 E-value=6.3e-09 Score=101.18 Aligned_cols=89 Identities=16% Similarity=0.095 Sum_probs=71.1
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCC-CCCCcccEEEecCcccccccChHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLP-FPAFSFDIVHCSRCLIPFTAYNAT 215 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LP-FpD~SFDlV~cs~~l~hw~d~~~~ 215 (527)
.|.++..|..++..+..+ |.++.+++.|+++ ++ .+.+.++|...+| +++++||+|+|..+++|+.+...
T Consensus 79 ~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~- 154 (285)
T 4htf_A 79 EGQTAIKMAERGHQVILC---DLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEWVADPRS- 154 (285)
T ss_dssp TCHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGGGCSCHHH-
T ss_pred chHHHHHHHHCCCEEEEE---ECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhhcccCHHH-
Confidence 344555566666544444 7788999999875 44 2567788999998 99999999999999999876655
Q ss_pred HHHHHhhcccCCcEEEEecC
Q 009719 216 YLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p 235 (527)
+|.|+.|+|||||+++++.+
T Consensus 155 ~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 155 VLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp HHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCeEEEEEEe
Confidence 99999999999999999876
|
| >1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42 | Back alignment and structure |
|---|
Probab=98.71 E-value=3.1e-09 Score=100.67 Aligned_cols=90 Identities=12% Similarity=0.173 Sum_probs=69.1
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcCC---CcEEeeccccCCCCCCCcccEEEecCcccccccC-hHHHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI---PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY-NATYLIE 219 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~---pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~-~~~aL~E 219 (527)
|.++..|+.++.. .+...|.++.+++.|+++.. .+.+..+|...+|+++++||+|+|..+++|+++. ...+|.+
T Consensus 105 G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~ 182 (254)
T 1xtp_A 105 GRITKNLLTKLYA--TTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIYLTDADFVKFFKH 182 (254)
T ss_dssp THHHHHTHHHHCS--EEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHH
T ss_pred CHHHHHHHHhhcC--EEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhhhCCHHHHHHHHHH
Confidence 4444455555421 23334778899999988753 3567778999999999999999999999998642 2359999
Q ss_pred HhhcccCCcEEEEecC
Q 009719 220 VDRLLRPGGYLVISGP 235 (527)
Q Consensus 220 i~RVLRPGG~lviS~p 235 (527)
+.|+|||||+|+++.+
T Consensus 183 ~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 183 CQQALTPNGYIFFKEN 198 (254)
T ss_dssp HHHHEEEEEEEEEEEE
T ss_pred HHHhcCCCeEEEEEec
Confidence 9999999999999875
|
| >3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=5.3e-09 Score=101.70 Aligned_cols=89 Identities=19% Similarity=0.240 Sum_probs=70.5
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC---------CCcEEeeccccCCC---CCCCcccEEEec-Cccccc
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG---------IPAFVAMLGTRRLP---FPAFSFDIVHCS-RCLIPF 209 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg---------~pa~~~v~dae~LP---FpD~SFDlV~cs-~~l~hw 209 (527)
.|.++..|.+++.. +...|.++.|++.|+++. ....+..++...+| |++++||+|+|. .+++|+
T Consensus 68 ~G~~~~~l~~~~~~---v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~ 144 (293)
T 3thr_A 68 TGVDSIMLVEEGFS---VTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHL 144 (293)
T ss_dssp TSHHHHHHHHTTCE---EEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGS
T ss_pred CCHHHHHHHHCCCe---EEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEEcChHHhhc
Confidence 45556667777764 444488899999997642 12456778888888 999999999998 899998
Q ss_pred cc-------ChHHHHHHHhhcccCCcEEEEecC
Q 009719 210 TA-------YNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 210 ~d-------~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+ ... +|.++.|+|||||+|+++.+
T Consensus 145 ~~~~~~~~~~~~-~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 145 PDSKGDQSEHRL-ALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp CCSSSSSHHHHH-HHHHHHHTEEEEEEEEEEEE
T ss_pred CccccCHHHHHH-HHHHHHHHcCCCeEEEEEeC
Confidence 87 444 99999999999999999987
|
| >3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=98.70 E-value=1.4e-08 Score=90.81 Aligned_cols=86 Identities=14% Similarity=0.085 Sum_probs=68.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDR 222 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~R 222 (527)
.|.++..|..++. .+...|.++.+++.|+++...+.+..+| +|+++++||+|+|..+++|+.+... +|.|+.|
T Consensus 28 ~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~~~~~~-~l~~~~~ 100 (170)
T 3i9f_A 28 NGFYCKYLLEFAT---KLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANSFHDMDDKQH-VISEVKR 100 (170)
T ss_dssp TCTTHHHHHTTEE---EEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESCSTTCSCHHH-HHHHHHH
T ss_pred CCHHHHHHHhhcC---eEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccchhcccCHHH-HHHHHHH
Confidence 3444555555553 4555588899999999885455666666 8999999999999999999876554 9999999
Q ss_pred cccCCcEEEEecC
Q 009719 223 LLRPGGYLVISGP 235 (527)
Q Consensus 223 VLRPGG~lviS~p 235 (527)
+|||||+++++..
T Consensus 101 ~L~pgG~l~~~~~ 113 (170)
T 3i9f_A 101 ILKDDGRVIIIDW 113 (170)
T ss_dssp HEEEEEEEEEEEE
T ss_pred hcCCCCEEEEEEc
Confidence 9999999999864
|
| >3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=7.5e-09 Score=95.31 Aligned_cols=89 Identities=13% Similarity=0.107 Sum_probs=70.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCC-CcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEV 220 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei 220 (527)
.|.++..|..++..+..+ |.++.+++.|++.+. .+.+..+|...+ +++++||+|+|+.+++|+.+.. ..+|.++
T Consensus 57 ~G~~~~~l~~~~~~v~~~---D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~ 132 (218)
T 3ou2_A 57 TGYWTRHLSGLADRVTAL---DGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVPDDRFEAFWESV 132 (218)
T ss_dssp TSHHHHHHHHHSSEEEEE---ESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEESCGGGSCHHHHHHHHHHH
T ss_pred CCHHHHHHHhcCCeEEEE---eCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEechhhcCCHHHHHHHHHHH
Confidence 344555566665543333 778999999998774 466778898888 8999999999999999987752 3599999
Q ss_pred hhcccCCcEEEEecC
Q 009719 221 DRLLRPGGYLVISGP 235 (527)
Q Consensus 221 ~RVLRPGG~lviS~p 235 (527)
.|+|||||+++++.+
T Consensus 133 ~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 133 RSAVAPGGVVEFVDV 147 (218)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHcCCCeEEEEEeC
Confidence 999999999999875
|
| >2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=1.6e-08 Score=99.10 Aligned_cols=87 Identities=13% Similarity=0.015 Sum_probs=67.9
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcC----------------------CCcEEeeccccCCCCCC-CcccEE
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERG----------------------IPAFVAMLGTRRLPFPA-FSFDIV 200 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg----------------------~pa~~~v~dae~LPFpD-~SFDlV 200 (527)
|..+.+|.++|..+..+ |.|+.+++.|+++. ..+.+.++|...||+++ ++||+|
T Consensus 80 G~~~~~La~~G~~V~gv---D~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~~~~~FD~V 156 (252)
T 2gb4_A 80 AIEMKWFADRGHTVVGV---EISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRI 156 (252)
T ss_dssp CTHHHHHHHTTCEEEEE---CSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGGCCCCEEEE
T ss_pred cHHHHHHHHCCCeEEEE---ECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCcccCCCEEEE
Confidence 44445667777654444 88999999997653 23567889999999985 999999
Q ss_pred EecCcccccccCh-HHHHHHHhhcccCCcEEEEe
Q 009719 201 HCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 201 ~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS 233 (527)
++..+++|++... ..++.|+.|+|||||+|++.
T Consensus 157 ~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 157 WDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp EESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 9998888886543 35999999999999999753
|
| >3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=1.7e-08 Score=93.60 Aligned_cols=89 Identities=19% Similarity=0.203 Sum_probs=71.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCC---CcEEeeccccCCCCCCCcccEEEecCcccccccCh--HHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI---PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN--ATYL 217 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~---pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~--~~aL 217 (527)
.|.++.+|..++. .+...|.++.+++.|+++.. .+.+.++|...++ ++++||+|+|+.+++|+.+.. ..+|
T Consensus 62 ~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~~l 137 (216)
T 3ofk_A 62 AGAFTEKLAPHCK---RLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEVLYYLEDMTQMRTAI 137 (216)
T ss_dssp TSHHHHHHGGGEE---EEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESCGGGSSSHHHHHHHH
T ss_pred CCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccHHHhCCCHHHHHHHH
Confidence 4555556666654 44455888999999988742 3567888999998 789999999999999988653 2489
Q ss_pred HHHhhcccCCcEEEEecC
Q 009719 218 IEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~p 235 (527)
.++.|+|||||+|+++++
T Consensus 138 ~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 138 DNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp HHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHcCCCCEEEEEec
Confidence 999999999999999876
|
| >3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=1.8e-08 Score=97.06 Aligned_cols=89 Identities=17% Similarity=0.192 Sum_probs=67.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
.|.++..|..++. ..+...|.++.+++.|+++ +++ +.+.++|.+.+|+++++||+|+|..+++|+ +.. .+
T Consensus 57 ~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~-~~~-~~ 132 (267)
T 3kkz_A 57 TGGQTMVLAGHVT--GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAIYNI-GFE-RG 132 (267)
T ss_dssp TCHHHHHHHTTCS--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCGGGT-CHH-HH
T ss_pred CCHHHHHHHhccC--CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCceec-CHH-HH
Confidence 3444444555522 1233337788888888765 443 677889999999999999999999999888 444 49
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
|.++.|+|||||+++++.+
T Consensus 133 l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 133 LNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp HHHHGGGEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCCEEEEEEe
Confidence 9999999999999999876
|
| >3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=98.69 E-value=8.3e-09 Score=95.62 Aligned_cols=115 Identities=19% Similarity=0.106 Sum_probs=80.2
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVD 221 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~ 221 (527)
.|.++..|..++..+.. .|.++.+++.|+++. ...+..++...+| ++++||+|+|+.+++|+.... ..+|.|+.
T Consensus 54 ~G~~~~~l~~~~~~v~~---vD~s~~~~~~a~~~~-~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~ 128 (211)
T 3e23_A 54 AGYQAEAMLAAGFDVDA---TDGSPELAAEASRRL-GRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPRDELADVLKLIW 128 (211)
T ss_dssp TSHHHHHHHHTTCEEEE---EESCHHHHHHHHHHH-TSCCEECCGGGCC-CCSCEEEEEECSCGGGSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHcCCeEEE---ECCCHHHHHHHHHhc-CCceEEeeeccCC-CCCcEEEEEecCchhhcCHHHHHHHHHHHH
Confidence 45555566677664443 478899999998873 3345567888899 899999999999999987322 34999999
Q ss_pred hcccCCcEEEEecCCCCCCCc--------hhHHHHHHHHHHhcc-eEEee
Q 009719 222 RLLRPGGYLVISGPPVQWPKQ--------DKEWADLQAVARALC-YELIA 262 (527)
Q Consensus 222 RVLRPGG~lviS~pp~~~~~~--------~~~w~~i~~l~~~mc-W~~~~ 262 (527)
|+|||||+|+++.++...... ...-+.++++.+... |+.+.
T Consensus 129 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~ 178 (211)
T 3e23_A 129 RALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVA 178 (211)
T ss_dssp HHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEE
T ss_pred HhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEE
Confidence 999999999998764321100 113345666666655 65543
|
| >3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=98.69 E-value=5.3e-08 Score=87.41 Aligned_cols=113 Identities=17% Similarity=0.099 Sum_probs=79.6
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEec-CcccccccC-hHHHHHHHh
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCS-RCLIPFTAY-NATYLIEVD 221 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs-~~l~hw~d~-~~~aL~Ei~ 221 (527)
|.++..|...+.. +...|.++.+++.|+++.....+..+|...+|+++++||+|+|+ .+++|+... ...+|.++.
T Consensus 58 G~~~~~l~~~~~~---v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~ 134 (195)
T 3cgg_A 58 GRIGGYLSKQGHD---VLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLAEDGREPALANIH 134 (195)
T ss_dssp THHHHHHHHTTCE---EEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHCCCc---EEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcChHHHHHHHHHHH
Confidence 4445556666653 33447788999999988656777888998999999999999998 566665433 235999999
Q ss_pred hcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeee
Q 009719 222 RLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAV 263 (527)
Q Consensus 222 RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~ 263 (527)
|+|||||+++++.+.... ...+.+.++.+...++....
T Consensus 135 ~~l~~~G~l~~~~~~~~~----~~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 135 RALGADGRAVIGFGAGRG----WVFGDFLEVAERVGLELENA 172 (195)
T ss_dssp HHEEEEEEEEEEEETTSS----CCHHHHHHHHHHHTEEEEEE
T ss_pred HHhCCCCEEEEEeCCCCC----cCHHHHHHHHHHcCCEEeee
Confidence 999999999998764221 12334555555556665443
|
| >2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=98.68 E-value=1.5e-08 Score=93.05 Aligned_cols=74 Identities=20% Similarity=0.219 Sum_probs=60.7
Q ss_pred cCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccc-cChHHHHHHHhhcccCCcEEEEecC
Q 009719 162 PRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFT-AYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 162 p~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~-d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
..|.++.+++.|+++ +....+.++|+..+|+++++||+|+|..+++|+. ++...+|.|+.|+|||||+++++..
T Consensus 51 ~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 51 GIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp EEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 337788888888764 4456677889999999999999999999998884 2233599999999999999999775
|
| >2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42 | Back alignment and structure |
|---|
Probab=98.67 E-value=8.4e-09 Score=97.91 Aligned_cols=91 Identities=16% Similarity=0.118 Sum_probs=69.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCC-----cEEeeccccCCCCCCCcccEEEecCcccccccCh-HHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIP-----AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~p-----a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~a 216 (527)
.|.++..|+.++. ..+...|.++.+++.|+++... ..+..+|...+++++++||+|+|..+++|+.+.. ..+
T Consensus 90 ~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~ 167 (241)
T 2ex4_A 90 IGRITKRLLLPLF--REVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEF 167 (241)
T ss_dssp TTHHHHHTTTTTC--SEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHH
T ss_pred CCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHHH
Confidence 3444445565542 1333447788999999877432 4567788999999999999999999999987644 249
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
|.|+.|+|||||+|+++.+
T Consensus 168 l~~~~~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 168 LRRCKGSLRPNGIIVIKDN 186 (241)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHhcCCCeEEEEEEc
Confidence 9999999999999999875
|
| >3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=98.66 E-value=1.5e-08 Score=97.66 Aligned_cols=88 Identities=20% Similarity=0.246 Sum_probs=68.6
Q ss_pred hccccccccC--CeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 144 ASFGGSMLSE--NILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 144 gsfga~Ll~r--~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
|.++..|..+ +..++.+ |.++.+++.|+++ +++ +.+..+|...+|+++++||+|+|+.+++|+.+... +
T Consensus 49 G~~~~~l~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~ 124 (276)
T 3mgg_A 49 GAQTVILAKNNPDAEITSI---DISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPEE-A 124 (276)
T ss_dssp SHHHHHHHHHCTTSEEEEE---ESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCGGGCSCHHH-H
T ss_pred CHHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechhhhcCCHHH-H
Confidence 4444445444 3333333 7778888888765 443 56778899999999999999999999999887665 9
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
|.++.|+|||||++++..+
T Consensus 125 l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 125 LKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCcEEEEEEc
Confidence 9999999999999999765
|
| >3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=1.5e-08 Score=100.46 Aligned_cols=88 Identities=15% Similarity=0.039 Sum_probs=69.0
Q ss_pred hhccccccccC-CeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHH
Q 009719 143 VASFGGSMLSE-NILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNAT 215 (527)
Q Consensus 143 vgsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~ 215 (527)
.|.++..|..+ +..+..+ |.++.+++.|+++ |+. +.+..+|.+.+||++++||+|+|..+++|+ + ...
T Consensus 128 ~G~~~~~la~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~-~-~~~ 202 (312)
T 3vc1_A 128 RGGSMVMAHRRFGSRVEGV---TLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNESTMYV-D-LHD 202 (312)
T ss_dssp TSHHHHHHHHHHCCEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCGGGS-C-HHH
T ss_pred CCHHHHHHHHHcCCEEEEE---eCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCchhhC-C-HHH
Confidence 34455555555 5433333 7788899888764 544 678889999999999999999999999888 4 445
Q ss_pred HHHHHhhcccCCcEEEEecC
Q 009719 216 YLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p 235 (527)
+|.|+.|+|||||++++.++
T Consensus 203 ~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 203 LFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEEc
Confidence 99999999999999999875
|
| >4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=1.9e-08 Score=99.05 Aligned_cols=72 Identities=22% Similarity=0.197 Sum_probs=59.2
Q ss_pred cCcChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEec
Q 009719 162 PRDSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 162 p~D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~ 234 (527)
..|.+++|++.|+++ +. ++.+.++|+..+|++ .||+|+|..+++|+++.+ ..+|+|+.|+|||||+|+++.
T Consensus 101 gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 101 AIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp EEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence 338899999999876 32 456788999999986 499999999998876544 248999999999999999987
Q ss_pred C
Q 009719 235 P 235 (527)
Q Consensus 235 p 235 (527)
+
T Consensus 179 ~ 179 (261)
T 4gek_A 179 K 179 (261)
T ss_dssp E
T ss_pred c
Confidence 5
|
| >3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=98.65 E-value=2.1e-08 Score=92.63 Aligned_cols=88 Identities=16% Similarity=0.194 Sum_probs=69.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccC--CCCCCCcccEEEecCcccccccChHHHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRR--LPFPAFSFDIVHCSRCLIPFTAYNATYLIEV 220 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~--LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei 220 (527)
.|.++.+|..++. .+...|.++.+++.|+++.. .+..+|... +|+++++||+|+|+.+++|+.+... +|.++
T Consensus 43 ~G~~~~~l~~~~~---~~~~~D~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~~~ 116 (230)
T 3cc8_A 43 SGALGAAIKENGT---RVSGIEAFPEAAEQAKEKLD--HVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFDPWA-VIEKV 116 (230)
T ss_dssp TSHHHHHHHTTTC---EEEEEESSHHHHHHHHTTSS--EEEESCTTTCCCCSCTTCEEEEEEESCGGGSSCHHH-HHHHT
T ss_pred CCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCC--cEEEcchhhcCCCCCCCccCEEEECChhhhcCCHHH-HHHHH
Confidence 3445555666654 34444888899999987653 455667655 8899999999999999999877655 99999
Q ss_pred hhcccCCcEEEEecCC
Q 009719 221 DRLLRPGGYLVISGPP 236 (527)
Q Consensus 221 ~RVLRPGG~lviS~pp 236 (527)
.|+|||||+++++.|.
T Consensus 117 ~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 117 KPYIKQNGVILASIPN 132 (230)
T ss_dssp GGGEEEEEEEEEEEEC
T ss_pred HHHcCCCCEEEEEeCC
Confidence 9999999999999874
|
| >3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=98.65 E-value=1.8e-08 Score=94.58 Aligned_cols=89 Identities=9% Similarity=0.081 Sum_probs=69.0
Q ss_pred hhccccccccC--CeeEEeeccCcChHHHHHHHHHcCC---CcEEeeccccCCCCCCCcccEEEecCcccccccChH-HH
Q 009719 143 VASFGGSMLSE--NILTLSFAPRDSHKAQIQFALERGI---PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA-TY 216 (527)
Q Consensus 143 vgsfga~Ll~r--~V~~msiAp~D~seaqvq~A~eRg~---pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~-~a 216 (527)
.|.++..|..+ +..+.. .|.++.+++.|+++.. .+.+..+|...+|++ ++||+|+|..+++|+.+... .+
T Consensus 55 ~G~~~~~l~~~~~~~~v~~---vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~ 130 (234)
T 3dtn_A 55 TGLLSAFLMEKYPEATFTL---VDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYDMVVSALSIHHLEDEDKKEL 130 (234)
T ss_dssp TSHHHHHHHHHCTTCEEEE---EESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEEEEEEESCGGGSCHHHHHHH
T ss_pred CCHHHHHHHHhCCCCeEEE---EECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCceEEEEeCccccCCHHHHHHH
Confidence 34444455554 443333 3778899999988732 466788899999998 99999999999999865542 49
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
|.|+.|+|||||+|+++.+
T Consensus 131 l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 131 YKRSYSILKESGIFINADL 149 (234)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHhcCCCcEEEEEEe
Confidence 9999999999999999875
|
| >3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=2.7e-08 Score=95.44 Aligned_cols=88 Identities=13% Similarity=0.075 Sum_probs=70.8
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecC-ccccccc--ChHHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSR-CLIPFTA--YNATYLIE 219 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~-~l~hw~d--~~~~aL~E 219 (527)
.|.++..|..++..+ ...|.++.+++.|+++...+.+.++|...+|+ +++||+|+|.. +++|+.+ +...+|.+
T Consensus 61 ~G~~~~~l~~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~ 136 (263)
T 3pfg_A 61 TGMHLRHLADSFGTV---EGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQAELDAALER 136 (263)
T ss_dssp TSHHHHHHTTTSSEE---EEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHcCCeE---EEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHH
Confidence 455566667776543 33488899999999886667788899999999 79999999998 8888753 33358999
Q ss_pred HhhcccCCcEEEEec
Q 009719 220 VDRLLRPGGYLVISG 234 (527)
Q Consensus 220 i~RVLRPGG~lviS~ 234 (527)
+.|+|||||+|+++.
T Consensus 137 ~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 137 FAAHVLPDGVVVVEP 151 (263)
T ss_dssp HHHTEEEEEEEEECC
T ss_pred HHHhcCCCcEEEEEe
Confidence 999999999999975
|
| >4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=2.7e-09 Score=110.00 Aligned_cols=90 Identities=18% Similarity=0.197 Sum_probs=72.5
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcE---EeeccccCCCCCCCcccEEEecCcccccccChHHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAF---VAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIE 219 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~---~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~E 219 (527)
.|.+..+|.+++..+..+ |.++.|++.|++++++.. +...+++.+||++++||+|+|..+++|+++... +|+|
T Consensus 118 ~G~~~~~l~~~g~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~~d~~~-~l~~ 193 (416)
T 4e2x_A 118 DGIMLRTIQEAGVRHLGF---EPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAANTLCHIPYVQS-VLEG 193 (416)
T ss_dssp TTTTHHHHHHTTCEEEEE---CCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGGCTTHHH-HHHH
T ss_pred CCHHHHHHHHcCCcEEEE---CCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECChHHhcCCHHH-HHHH
Confidence 455555566777644444 889999999999977643 334567889999999999999999999986655 9999
Q ss_pred HhhcccCCcEEEEecCC
Q 009719 220 VDRLLRPGGYLVISGPP 236 (527)
Q Consensus 220 i~RVLRPGG~lviS~pp 236 (527)
+.|+|||||+|+++.|.
T Consensus 194 ~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 194 VDALLAPDGVFVFEDPY 210 (416)
T ss_dssp HHHHEEEEEEEEEEEEC
T ss_pred HHHHcCCCeEEEEEeCC
Confidence 99999999999998763
|
| >4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A | Back alignment and structure |
|---|
Probab=98.64 E-value=3e-08 Score=102.03 Aligned_cols=72 Identities=28% Similarity=0.186 Sum_probs=61.6
Q ss_pred CcChHHHHHHHHHc---------C----CCcEEeeccccCC------CCCCCcccEEEecCcccccccChHHHHHHHhhc
Q 009719 163 RDSHKAQIQFALER---------G----IPAFVAMLGTRRL------PFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRL 223 (527)
Q Consensus 163 ~D~seaqvq~A~eR---------g----~pa~~~v~dae~L------PFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RV 223 (527)
.|.++.|++.|+++ | ..+.+.++|.+.+ ||++++||+|+|..+++|+.+... +|.|+.|+
T Consensus 114 vD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~-~l~~~~r~ 192 (383)
T 4fsd_A 114 VDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGVPDSSVDIVISNCVCNLSTNKLA-LFKEIHRV 192 (383)
T ss_dssp EECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSCHHH-HHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCCCCCCEEEEEEccchhcCCCHHH-HHHHHHHH
Confidence 37788999999876 4 3567788888887 999999999999999988876555 99999999
Q ss_pred ccCCcEEEEecC
Q 009719 224 LRPGGYLVISGP 235 (527)
Q Consensus 224 LRPGG~lviS~p 235 (527)
|||||+|+++.+
T Consensus 193 LkpgG~l~i~~~ 204 (383)
T 4fsd_A 193 LRDGGELYFSDV 204 (383)
T ss_dssp EEEEEEEEEEEE
T ss_pred cCCCCEEEEEEe
Confidence 999999999864
|
| >3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.63 E-value=8.8e-08 Score=90.31 Aligned_cols=116 Identities=13% Similarity=0.071 Sum_probs=80.4
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCC------cEEeeccccCCCCCCCcccEEEecCcccccccC-hHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIP------AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY-NAT 215 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~p------a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~-~~~ 215 (527)
.|.++..|...+..+. ..|.++.+++.|+++... +.+.++|...++ ++++||+|+|..+++|++.. ...
T Consensus 77 ~G~~~~~l~~~~~~v~---gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~ 152 (235)
T 3lcc_A 77 GGHDVVAMASPERFVV---GLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCAIEPEMRPA 152 (235)
T ss_dssp TCHHHHHHCBTTEEEE---EECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTTSCGGGHHH
T ss_pred CCHHHHHHHhCCCeEE---EEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhhcCCHHHHHH
Confidence 4555555666665444 448899999999877422 567788988887 56799999999999888632 234
Q ss_pred HHHHHhhcccCCcEEEEecCCCCCC--C--chhHHHHHHHHHHhcceEEee
Q 009719 216 YLIEVDRLLRPGGYLVISGPPVQWP--K--QDKEWADLQAVARALCYELIA 262 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~pp~~~~--~--~~~~w~~i~~l~~~mcW~~~~ 262 (527)
+|.++.|+|||||+|++...+.... + ....-+.++++.+...|+.+.
T Consensus 153 ~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 203 (235)
T 3lcc_A 153 WAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVS 203 (235)
T ss_dssp HHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEE
T ss_pred HHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEE
Confidence 9999999999999999876532111 0 011235566676766676654
|
| >2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A | Back alignment and structure |
|---|
Probab=98.62 E-value=4e-08 Score=90.22 Aligned_cols=88 Identities=13% Similarity=0.095 Sum_probs=67.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCccccccc-ChHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA-YNATYL 217 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d-~~~~aL 217 (527)
.|.++.+|..++.. +...|.++.+++.|+++ +....+.++|...+|+++++||+|+|+. .|+.. +...+|
T Consensus 40 ~G~~~~~l~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~~~~~~~~~~~l 114 (202)
T 2kw5_A 40 EGRNACFLASLGYE---VTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIF--CHLPSSLRQQLY 114 (202)
T ss_dssp CTHHHHHHHTTTCE---EEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEEC--CCCCHHHHHHHH
T ss_pred CCHhHHHHHhCCCe---EEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEh--hcCCHHHHHHHH
Confidence 34455566666654 33448888999988766 4566777889999999999999999964 46532 334599
Q ss_pred HHHhhcccCCcEEEEecC
Q 009719 218 IEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~p 235 (527)
.++.|+|||||+++++.+
T Consensus 115 ~~~~~~L~pgG~l~~~~~ 132 (202)
T 2kw5_A 115 PKVYQGLKPGGVFILEGF 132 (202)
T ss_dssp HHHHTTCCSSEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEEEe
Confidence 999999999999999875
|
| >3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.62 E-value=2.6e-08 Score=97.83 Aligned_cols=85 Identities=14% Similarity=0.092 Sum_probs=66.1
Q ss_pred hccccccc---cCCeeEEeeccCcChHHHHHHHHHc-------CCCcEEeeccccCCCCCC------CcccEEEecCccc
Q 009719 144 ASFGGSML---SENILTLSFAPRDSHKAQIQFALER-------GIPAFVAMLGTRRLPFPA------FSFDIVHCSRCLI 207 (527)
Q Consensus 144 gsfga~Ll---~r~V~~msiAp~D~seaqvq~A~eR-------g~pa~~~v~dae~LPFpD------~SFDlV~cs~~l~ 207 (527)
|.++..|. ..+..++.+ |.++.|++.|+++ ...+.+.++|++.+|+++ ++||+|+|+.+++
T Consensus 48 G~~~~~la~~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~ 124 (299)
T 3g5t_A 48 GTATLQMAQELKPFEQIIGS---DLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKIDMITAVECAH 124 (299)
T ss_dssp THHHHHHHHHSSCCSEEEEE---ESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEEEEEEESCGG
T ss_pred CHHHHHHHHhCCCCCEEEEE---eCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCeeEEeHhhHHH
Confidence 44444555 344443333 7788999999876 335678889999999998 9999999999987
Q ss_pred ccccChHHHHHHHhhcccCCcEEEEe
Q 009719 208 PFTAYNATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 208 hw~d~~~~aL~Ei~RVLRPGG~lviS 233 (527)
|+ +. ..+|.++.|+|||||+|++.
T Consensus 125 ~~-~~-~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 125 WF-DF-EKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp GS-CH-HHHHHHHHHHEEEEEEEEEE
T ss_pred Hh-CH-HHHHHHHHHhcCCCcEEEEE
Confidence 77 44 45999999999999999983
|
| >1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=98.62 E-value=2.6e-08 Score=93.38 Aligned_cols=70 Identities=24% Similarity=0.314 Sum_probs=61.0
Q ss_pred cChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCC
Q 009719 164 DSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 164 D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
|.++.+++.|+++ ...+..++...+|+++++||+|+|..+++|+.+... +|.++.|+|||||+++++.+.
T Consensus 72 D~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 72 EPSERMAEIARKR--GVFVLKGTAENLPLKDESFDFALMVTTICFVDDPER-ALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp ESCHHHHHHHHHT--TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHHH-HHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCHHHHHHHHhc--CCEEEEcccccCCCCCCCeeEEEEcchHhhccCHHH-HHHHHHHHcCCCcEEEEEEeC
Confidence 7788999999988 355667788899999999999999999988866554 999999999999999998763
|
| >3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A | Back alignment and structure |
|---|
Probab=98.62 E-value=3.8e-08 Score=96.34 Aligned_cols=89 Identities=16% Similarity=0.153 Sum_probs=69.0
Q ss_pred hhccccccccC---CeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccChHH
Q 009719 143 VASFGGSMLSE---NILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNAT 215 (527)
Q Consensus 143 vgsfga~Ll~r---~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~ 215 (527)
.|.++..|.++ +..+.. .|.++.|++.|+++ +..+.+.++|+..+|++ ++||+|+|..+++|+.+...
T Consensus 33 ~G~~~~~l~~~~~~~~~v~g---vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~- 107 (284)
T 3gu3_A 33 YGYLGLVLMPLLPEGSKYTG---IDSGETLLAEARELFRLLPYDSEFLEGDATEIELN-DKYDIAICHAFLLHMTTPET- 107 (284)
T ss_dssp TTHHHHHHTTTSCTTCEEEE---EESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-SCEEEEEEESCGGGCSSHHH-
T ss_pred CCHHHHHHHHhCCCCCEEEE---EECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-CCeeEEEECChhhcCCCHHH-
Confidence 45555555554 343333 37788999988875 23466788899999995 69999999999988876665
Q ss_pred HHHHHhhcccCCcEEEEecCC
Q 009719 216 YLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~pp 236 (527)
+|.++.|+|||||++++..+.
T Consensus 108 ~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 108 MLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp HHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHcCCCCEEEEEecc
Confidence 999999999999999998874
|
| >1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=98.60 E-value=3.8e-08 Score=92.04 Aligned_cols=89 Identities=15% Similarity=0.171 Sum_probs=68.8
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecC-ccccccc--ChHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSR-CLIPFTA--YNAT 215 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~-~l~hw~d--~~~~ 215 (527)
.|.++..|..++.. +...|.++.+++.|+++ +..+.+.++|...+|++ ++||+|+|.. +++|+.+ +...
T Consensus 48 ~G~~~~~l~~~~~~---~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~ 123 (246)
T 1y8c_A 48 TGNLTENLCPKFKN---TWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDSTNYIIDSDDLKK 123 (246)
T ss_dssp TSTTHHHHGGGSSE---EEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTGGGGCCSHHHHHH
T ss_pred CCHHHHHHHHCCCc---EEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEcCccccccCCHHHHHH
Confidence 34455556666654 33448888999988865 33567778899999998 8999999998 9988843 2335
Q ss_pred HHHHHhhcccCCcEEEEecC
Q 009719 216 YLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p 235 (527)
+|.++.|+|||||+|+++.+
T Consensus 124 ~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 124 YFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp HHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEec
Confidence 99999999999999999876
|
| >3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.59 E-value=1.1e-07 Score=93.83 Aligned_cols=74 Identities=16% Similarity=0.073 Sum_probs=61.8
Q ss_pred ccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChH--HHHHHHhhcccCCcEEEE
Q 009719 161 APRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA--TYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 161 Ap~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~--~aL~Ei~RVLRPGG~lvi 232 (527)
...|.++.+++.|+++ ++. +.+.++|...+|++ ++||+|+|..+++|+++... .+|.|+.|+|||||+|++
T Consensus 147 ~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 225 (305)
T 3ocj_A 147 VGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVT 225 (305)
T ss_dssp EEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 3337788999999876 333 56788999999998 99999999999999877665 279999999999999999
Q ss_pred ecC
Q 009719 233 SGP 235 (527)
Q Consensus 233 S~p 235 (527)
+..
T Consensus 226 ~~~ 228 (305)
T 3ocj_A 226 SFL 228 (305)
T ss_dssp ECC
T ss_pred Eec
Confidence 873
|
| >3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A | Back alignment and structure |
|---|
Probab=98.58 E-value=5.9e-08 Score=90.34 Aligned_cols=90 Identities=9% Similarity=0.019 Sum_probs=65.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC----C------CcEEeeccccCCCCCCCcccEEEecCcccccccC
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG----I------PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY 212 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg----~------pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~ 212 (527)
.|.++.+|..++-. ..+...|.++.+++.|+++. + .+.+.++|...+++++++||+|+|..+++|+.+.
T Consensus 40 ~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~ 118 (219)
T 3jwg_A 40 EGNLLSLLLKDKSF-EQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATVIEVIEHLDEN 118 (219)
T ss_dssp TCHHHHHHHTSTTC-CEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEEESCGGGCCHH
T ss_pred CCHHHHHHHhcCCC-CEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEEHHHHHhCCHH
Confidence 34444455554410 12333377889999998762 2 4567788888999999999999999999998755
Q ss_pred h-HHHHHHHhhcccCCcEEEEe
Q 009719 213 N-ATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 213 ~-~~aL~Ei~RVLRPGG~lviS 233 (527)
. ..+|.++.|+|||||.++.+
T Consensus 119 ~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 119 RLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp HHHHHHHHHHTTTCCSEEEEEE
T ss_pred HHHHHHHHHHHhhCCCEEEEEc
Confidence 3 34999999999999966554
|
| >2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=5.6e-08 Score=88.20 Aligned_cols=88 Identities=15% Similarity=0.187 Sum_probs=66.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC-CcEEeeccccCCCCCCCcccEEEecCcccccccC-hHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY-NATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~-~~~a 216 (527)
.|.++..|..++..+. ..|.++.+++.|+++ +. ...+..+|...+|+ +++||+|+|..+++|+... ...+
T Consensus 43 ~G~~~~~l~~~~~~v~---~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~~~~~~~~~~ 118 (199)
T 2xvm_A 43 NGRNSLYLAANGYDVD---AWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMFLEAKTIPGL 118 (199)
T ss_dssp TSHHHHHHHHTTCEEE---EEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGGSCGGGHHHH
T ss_pred CCHHHHHHHHCCCeEE---EEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhhCCHHHHHHH
Confidence 3444555666665333 337778888888754 44 46677889999999 8999999999999888632 3359
Q ss_pred HHHHhhcccCCcEEEEec
Q 009719 217 LIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~ 234 (527)
|.++.|+|||||++++..
T Consensus 119 l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 119 IANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp HHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHhcCCCeEEEEEE
Confidence 999999999999988754
|
| >3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440} | Back alignment and structure |
|---|
Probab=98.57 E-value=4.7e-08 Score=90.07 Aligned_cols=87 Identities=20% Similarity=0.235 Sum_probs=65.2
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCC---CCCCC-cccEEEecCcccccccChHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRL---PFPAF-SFDIVHCSRCLIPFTAYNATYLI 218 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~L---PFpD~-SFDlV~cs~~l~hw~d~~~~aL~ 218 (527)
.|.++.+|..++..+.. .|.++.+++.|+++ ....+..++...+ |++++ +||+|+|+.+++ ..+... +|.
T Consensus 63 ~G~~~~~l~~~~~~v~~---vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~~~~~~-~l~ 136 (227)
T 3e8s_A 63 EGWLLRALADRGIEAVG---VDGDRTLVDAARAA-GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-HQDIIE-LLS 136 (227)
T ss_dssp TCHHHHHHHTTTCEEEE---EESCHHHHHHHHHT-CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-SSCCHH-HHH
T ss_pred CCHHHHHHHHCCCEEEE---EcCCHHHHHHHHHh-cccccchhhHHhhcccccccCCCccEEEECchhh-hhhHHH-HHH
Confidence 45555566677664444 48889999999988 3445555666555 76655 499999999986 555444 999
Q ss_pred HHhhcccCCcEEEEecC
Q 009719 219 EVDRLLRPGGYLVISGP 235 (527)
Q Consensus 219 Ei~RVLRPGG~lviS~p 235 (527)
++.|+|||||+|+++.+
T Consensus 137 ~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 137 AMRTLLVPGGALVIQTL 153 (227)
T ss_dssp HHHHTEEEEEEEEEEEC
T ss_pred HHHHHhCCCeEEEEEec
Confidence 99999999999999886
|
| >3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A | Back alignment and structure |
|---|
Probab=98.53 E-value=8.3e-08 Score=89.41 Aligned_cols=91 Identities=9% Similarity=0.045 Sum_probs=65.5
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC------CcEEeeccccCCCCCCCcccEEEecCcccccccC
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI------PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY 212 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~------pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~ 212 (527)
.|.++.+|..++-. ..+...|.++.+++.|+++ ++ .+.+.++|...+++++++||+|+|..+++|+.+.
T Consensus 40 ~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~ 118 (217)
T 3jwh_A 40 QGNLLKILLKDSFF-EQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATVIEVIEHLDLS 118 (217)
T ss_dssp TCHHHHHHHHCTTC-SEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEEESCGGGCCHH
T ss_pred CCHHHHHHHhhCCC-CEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEeeHHHHHcCCHH
Confidence 34444455544310 1233337788999999876 22 3567778888889999999999999999998654
Q ss_pred h-HHHHHHHhhcccCCcEEEEec
Q 009719 213 N-ATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 213 ~-~~aL~Ei~RVLRPGG~lviS~ 234 (527)
. ..+|.++.|+|||||.++++.
T Consensus 119 ~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 119 RLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp HHHHHHHHHHTTTCCSEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEcc
Confidence 2 349999999999999776654
|
| >2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.51 E-value=3.9e-08 Score=90.11 Aligned_cols=90 Identities=20% Similarity=0.228 Sum_probs=67.3
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcCC---CcEEeeccccCCCCCCCcccEEEecCcccccc----------
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI---PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFT---------- 210 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~---pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~---------- 210 (527)
|.++..|...+.. .+...|.++.+++.|+++.. .+.+.++|...+|+++++||+|+|..++.|..
T Consensus 54 G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~ 131 (215)
T 2pxx_A 54 SALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVS 131 (215)
T ss_dssp CSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCC
T ss_pred cHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhhhccccccccccc
Confidence 4444455555542 33344778899999988742 35677889999999999999999988776543
Q ss_pred ----cChHHHHHHHhhcccCCcEEEEecC
Q 009719 211 ----AYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 211 ----d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+....+|.|+.|+|||||++++.++
T Consensus 132 ~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 132 SEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp HHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred cchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 1223599999999999999999887
|
| >1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=3.9e-08 Score=93.37 Aligned_cols=89 Identities=16% Similarity=0.073 Sum_probs=63.8
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC----CCcEEeeccccCC--CCCCCcccEEEe-cCcccccccCh--
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG----IPAFVAMLGTRRL--PFPAFSFDIVHC-SRCLIPFTAYN-- 213 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg----~pa~~~v~dae~L--PFpD~SFDlV~c-s~~l~hw~d~~-- 213 (527)
.|.++.+|...+.. .+...|.++.|++.|+++. ..+.+.+++++.+ ||++++||+|+| ...+ +..+..
T Consensus 71 tG~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~-~~~~~~~~ 147 (236)
T 1zx0_A 71 MAIAASKVQEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL-SEETWHTH 147 (236)
T ss_dssp TSHHHHHHHTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC-BGGGTTTH
T ss_pred CCHHHHHHHhcCCC--eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCccc-chhhhhhh
Confidence 34444455554442 4445588999999998763 3456778888888 999999999999 5553 322221
Q ss_pred --HHHHHHHhhcccCCcEEEEec
Q 009719 214 --ATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 214 --~~aL~Ei~RVLRPGG~lviS~ 234 (527)
..+|.|+.|+|||||+|++..
T Consensus 148 ~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 148 QFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp HHHHHHHTHHHHEEEEEEEEECC
T ss_pred hHHHHHHHHHHhcCCCeEEEEEe
Confidence 237999999999999999864
|
| >1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=98.48 E-value=5.1e-08 Score=90.49 Aligned_cols=89 Identities=20% Similarity=0.216 Sum_probs=66.8
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCccccccc-ChHHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA-YNATYLI 218 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d-~~~~aL~ 218 (527)
|.++..|..++. .+...|.++.+++.|+++ +..+.+..+|...+|+++++||+|+|..+++++.. +...+|.
T Consensus 50 G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~ 126 (227)
T 1ve3_A 50 GGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFEPLELNQVFK 126 (227)
T ss_dssp SHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGCCHHHHHHHHH
T ss_pred CHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhCCHHHHHHHHH
Confidence 444555556655 344447788899888765 34567788899999999999999999988433332 2234999
Q ss_pred HHhhcccCCcEEEEecC
Q 009719 219 EVDRLLRPGGYLVISGP 235 (527)
Q Consensus 219 Ei~RVLRPGG~lviS~p 235 (527)
++.|+|||||++++..+
T Consensus 127 ~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 127 EVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp HHHHHEEEEEEEEEEEE
T ss_pred HHHHHcCCCcEEEEEec
Confidence 99999999999999876
|
| >2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15 | Back alignment and structure |
|---|
Probab=98.47 E-value=5.8e-08 Score=94.32 Aligned_cols=54 Identities=22% Similarity=0.153 Sum_probs=42.4
Q ss_pred EeeccccC-CCCC---CCcccEEEecCccccccc---ChHHHHHHHhhcccCCcEEEEecC
Q 009719 182 VAMLGTRR-LPFP---AFSFDIVHCSRCLIPFTA---YNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 182 ~~v~dae~-LPFp---D~SFDlV~cs~~l~hw~d---~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.++|... .|++ +++||+|+|+.|++|... +...+|+++.|+|||||+|++++.
T Consensus 138 ~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 138 VLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp EEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 55667655 5654 789999999999987532 223499999999999999999974
|
| >3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.47 E-value=1.1e-07 Score=88.94 Aligned_cols=88 Identities=15% Similarity=0.046 Sum_probs=67.0
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecC-cccccccC--hHHHHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSR-CLIPFTAY--NATYLIEV 220 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~-~l~hw~d~--~~~aL~Ei 220 (527)
|.++..|..++. .+...|.++.+++.|+++...+.+..+|...+|+ +++||+|+|+. +++|..+. ...+|.++
T Consensus 52 G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~ 127 (239)
T 3bxo_A 52 GTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKTTEELGAAVASF 127 (239)
T ss_dssp SHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHH
T ss_pred CHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHH
Confidence 444455555544 3334477889999999886556778889989998 78999999866 77776432 23599999
Q ss_pred hhcccCCcEEEEecC
Q 009719 221 DRLLRPGGYLVISGP 235 (527)
Q Consensus 221 ~RVLRPGG~lviS~p 235 (527)
.|+|||||+++++.+
T Consensus 128 ~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 128 AEHLEPGGVVVVEPW 142 (239)
T ss_dssp HHTEEEEEEEEECCC
T ss_pred HHhcCCCeEEEEEec
Confidence 999999999999865
|
| >2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus} | Back alignment and structure |
|---|
Probab=98.46 E-value=7.5e-08 Score=96.70 Aligned_cols=91 Identities=16% Similarity=0.100 Sum_probs=62.4
Q ss_pred hhccccc-c---ccCCeeEEeeccCcChHHHHHHHHHc----CCC-------cEEeeccc------cCC--CCCCCcccE
Q 009719 143 VASFGGS-M---LSENILTLSFAPRDSHKAQIQFALER----GIP-------AFVAMLGT------RRL--PFPAFSFDI 199 (527)
Q Consensus 143 vgsfga~-L---l~r~V~~msiAp~D~seaqvq~A~eR----g~p-------a~~~v~da------e~L--PFpD~SFDl 199 (527)
+|+.+|. + +..+.. .+...|.++.|++.|+++ +.. +.+.+.+. +.| ++++++||+
T Consensus 55 lGCG~G~~l~~~~~~~~~--~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~ 132 (302)
T 2vdw_A 55 IDFGNGADLEKYFYGEIA--LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGKFNI 132 (302)
T ss_dssp TTCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSSCEEE
T ss_pred EecCCcHhHHHHHhcCCC--eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCCCeeE
Confidence 6665553 2 333321 344448889999999876 221 23444444 444 578999999
Q ss_pred EEecCccccccc--ChHHHHHHHhhcccCCcEEEEecC
Q 009719 200 VHCSRCLIPFTA--YNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 200 V~cs~~l~hw~d--~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.|..++|+..+ +...+|+|+.|+|||||+|+++++
T Consensus 133 V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 133 IDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp EEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 999998865322 234599999999999999999987
|
| >3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=4e-08 Score=94.46 Aligned_cols=88 Identities=17% Similarity=0.049 Sum_probs=62.5
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcC----CCcEEeeccccC--CCCCCCcccEEEe-----cCcccccccC
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERG----IPAFVAMLGTRR--LPFPAFSFDIVHC-----SRCLIPFTAY 212 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg----~pa~~~v~dae~--LPFpD~SFDlV~c-----s~~l~hw~d~ 212 (527)
|..+.+|...... +++..|.++.|++.|+++. ....+..++++. .++++++||.|.+ ...+.|+.+.
T Consensus 72 G~~~~~~~~~~~~--~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~ 149 (236)
T 3orh_A 72 AIAASKVQEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQF 149 (236)
T ss_dssp SHHHHHHTTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHH
T ss_pred cHHHHHHHHhCCc--EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeeecccchhhhcch
Confidence 3334455555443 3445588899999998763 334566677654 4789999999974 4455666655
Q ss_pred hHHHHHHHhhcccCCcEEEEec
Q 009719 213 NATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 213 ~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
.. ++.|+.|||||||+|++..
T Consensus 150 ~~-~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 150 NF-IKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp HH-HHHTHHHHEEEEEEEEECC
T ss_pred hh-hhhhhhheeCCCCEEEEEe
Confidence 55 9999999999999999864
|
| >3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=8.9e-08 Score=94.04 Aligned_cols=89 Identities=13% Similarity=0.034 Sum_probs=68.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC--------CCcEEeeccccCCCCCCCcccEEEecCcccccccC--
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG--------IPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY-- 212 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg--------~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~-- 212 (527)
.|.++..|..++..+.. .|.++.+++.|+++. ..+.+.++|...+|+ +++||+|+|+..+.|+.+.
T Consensus 93 ~G~~~~~l~~~~~~v~g---vD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~~~~~~~~ 168 (299)
T 3g2m_A 93 MGRLTFPFLDLGWEVTA---LELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGSINELDEAD 168 (299)
T ss_dssp TTTTHHHHHTTTCCEEE---EESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHHHTTSCHHH
T ss_pred CCHHHHHHHHcCCeEEE---EECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCcccccCCHHH
Confidence 45555666677654333 377889999998762 236788899999999 7999999988665666553
Q ss_pred hHHHHHHHhhcccCCcEEEEecC
Q 009719 213 NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 213 ~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
...+|.++.|+|||||+|+++.+
T Consensus 169 ~~~~l~~~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 169 RRGLYASVREHLEPGGKFLLSLA 191 (299)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEee
Confidence 24599999999999999999886
|
| >1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=7.8e-08 Score=92.87 Aligned_cols=89 Identities=18% Similarity=0.147 Sum_probs=64.6
Q ss_pred ccccccccCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCCC-CCCcccEEEecCccccc---ccChH
Q 009719 145 SFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLPF-PAFSFDIVHCSRCLIPF---TAYNA 214 (527)
Q Consensus 145 sfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LPF-pD~SFDlV~cs~~l~hw---~d~~~ 214 (527)
.++..|...+.. .+...|.++.+++.|+++ +. .+.+.++|...+|+ ++++||+|+|..+++|. ..+..
T Consensus 77 ~~~~~l~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~ 154 (298)
T 1ri5_A 77 GDLLKYERAGIG--EYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSFHYAFSTSESLD 154 (298)
T ss_dssp TTHHHHHHHTCS--EEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCGGGGGSSHHHHH
T ss_pred HHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchhhhhcCCHHHHH
Confidence 333344444431 233337788899988876 22 24677889999999 69999999999998662 12223
Q ss_pred HHHHHHhhcccCCcEEEEecC
Q 009719 215 TYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 215 ~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+|.++.|+|||||+|+++.+
T Consensus 155 ~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 155 IAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp HHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEEC
Confidence 599999999999999999987
|
| >1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=2e-07 Score=90.48 Aligned_cols=86 Identities=12% Similarity=0.080 Sum_probs=63.8
Q ss_pred hccccccc-cCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCccccccc-ChHH
Q 009719 144 ASFGGSML-SENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA-YNAT 215 (527)
Q Consensus 144 gsfga~Ll-~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d-~~~~ 215 (527)
|.++.+|. ..+. .+...|.++.|++.|+++ +. .+.+..+|.+.+| ++||+|+|..+++|+.+ +...
T Consensus 76 G~~~~~l~~~~~~---~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~ 149 (287)
T 1kpg_A 76 GATMMRAVEKYDV---NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAFEHFGHERYDA 149 (287)
T ss_dssp SHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCGGGTCTTTHHH
T ss_pred cHHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCchhhcChHHHHH
Confidence 33444444 3344 333447788999999876 33 3566778887777 89999999999999953 3345
Q ss_pred HHHHHhhcccCCcEEEEecC
Q 009719 216 YLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p 235 (527)
+|.|+.|+|||||+++++.+
T Consensus 150 ~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 150 FFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp HHHHHHHHSCTTCEEEEEEE
T ss_pred HHHHHHHhcCCCCEEEEEEe
Confidence 99999999999999999876
|
| >2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ... | Back alignment and structure |
|---|
Probab=98.43 E-value=8.2e-08 Score=93.82 Aligned_cols=53 Identities=26% Similarity=0.429 Sum_probs=41.0
Q ss_pred EeeccccC-CCCC-----CCcccEEEecCcccccccC---hHHHHHHHhhcccCCcEEEEec
Q 009719 182 VAMLGTRR-LPFP-----AFSFDIVHCSRCLIPFTAY---NATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 182 ~~v~dae~-LPFp-----D~SFDlV~cs~~l~hw~d~---~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
+.++|+.. +||+ +++||+|+|+.+++|.... ...+|.|+.|+|||||+|+++.
T Consensus 154 ~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 154 VLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp EECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 34457766 7754 5679999999999774322 3349999999999999999975
|
| >3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=3e-07 Score=90.33 Aligned_cols=87 Identities=13% Similarity=0.072 Sum_probs=65.6
Q ss_pred hhccccccccC-CeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccCh--
Q 009719 143 VASFGGSMLSE-NILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-- 213 (527)
Q Consensus 143 vgsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-- 213 (527)
.|.++.+|..+ +.. +...|.++.|++.|+++ +++ +.+..+|...+ +++||+|+|..+++|+++..
T Consensus 83 ~G~~~~~la~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~~~~~~d~~~~ 156 (302)
T 3hem_A 83 WGSTMRHAVAEYDVN---VIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLGAFEHFADGAGD 156 (302)
T ss_dssp TSHHHHHHHHHHCCE---EEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEESCGGGTTCCSSC
T ss_pred CcHHHHHHHHhCCCE---EEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcchHHhcCccccc
Confidence 34444455555 543 33447788999998865 444 56777888776 89999999999999996651
Q ss_pred ------HHHHHHHhhcccCCcEEEEecC
Q 009719 214 ------ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 214 ------~~aL~Ei~RVLRPGG~lviS~p 235 (527)
..+|.++.|+|||||++++.+.
T Consensus 157 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 157 AGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp CCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred cchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 3499999999999999999875
|
| >3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=98.42 E-value=2.7e-07 Score=89.73 Aligned_cols=88 Identities=11% Similarity=0.115 Sum_probs=68.3
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYL 217 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL 217 (527)
.|.++.+|..++..+. ..|.++.+++.|+++ ++.+.+..+|...+++ +++||+|+|+.+++|+.+.. ..+|
T Consensus 131 ~G~~~~~l~~~g~~v~---~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~~~~~~~~~l 206 (286)
T 3m70_A 131 QGRNSLYLSLLGYDVT---SWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMFLNRERVPSII 206 (286)
T ss_dssp TCHHHHHHHHTTCEEE---EEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGSCGGGHHHHH
T ss_pred CCHHHHHHHHCCCeEE---EEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhhCCHHHHHHHH
Confidence 4555556667766433 347788888888764 5567788889999988 89999999999998886544 3599
Q ss_pred HHHhhcccCCcEEEEec
Q 009719 218 IEVDRLLRPGGYLVISG 234 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~ 234 (527)
.++.|+|||||++++..
T Consensus 207 ~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 207 KNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp HHHHHTEEEEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEEE
Confidence 99999999999988754
|
| >1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33 | Back alignment and structure |
|---|
Probab=98.41 E-value=1.4e-07 Score=90.73 Aligned_cols=66 Identities=26% Similarity=0.387 Sum_probs=57.2
Q ss_pred CcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCC
Q 009719 163 RDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 163 ~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
.|.++.+++.|++++..+.+.++|.+.+||++++||+|+|..+. .++.|+.|+|||||++++.+|.
T Consensus 115 vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~--------~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 115 LDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP--------CKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp EESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC--------CCHHHHHHHEEEEEEEEEEEEC
T ss_pred EeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh--------hhHHHHHHhcCCCcEEEEEEcC
Confidence 37789999999998866778888999999999999999986542 2699999999999999999873
|
| >2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=1.8e-07 Score=88.82 Aligned_cols=90 Identities=19% Similarity=0.185 Sum_probs=63.8
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcC--CC--------------------------------c-EEeecccc
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERG--IP--------------------------------A-FVAMLGTR 188 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg--~p--------------------------------a-~~~v~dae 188 (527)
|.++..|..++. ..+...|.++.+++.|+++. .+ + .+.++|..
T Consensus 68 G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~ 145 (265)
T 2i62_A 68 TIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVT 145 (265)
T ss_dssp CCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTT
T ss_pred cHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeec
Confidence 344444555554 24445588899999987652 11 3 56777877
Q ss_pred CC-CCCC---CcccEEEecCcccccccC---hHHHHHHHhhcccCCcEEEEecC
Q 009719 189 RL-PFPA---FSFDIVHCSRCLIPFTAY---NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 189 ~L-PFpD---~SFDlV~cs~~l~hw~d~---~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+ |+++ ++||+|+|..+++|.... ...+|.++.|+|||||+|+++..
T Consensus 146 ~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 146 QSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp SSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 65 4467 999999999999843322 23499999999999999999874
|
| >2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.39 E-value=8.4e-07 Score=82.29 Aligned_cols=90 Identities=18% Similarity=0.300 Sum_probs=65.0
Q ss_pred CCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEE
Q 009719 153 ENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 153 r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lvi 232 (527)
..++++++++. ...+.+++...+|+++++||+|+|+.++ |+.+ ...+|.|+.|+|||||++++
T Consensus 87 ~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l-~~~~-~~~~l~~~~~~L~~gG~l~i 149 (215)
T 2zfu_A 87 NPVHCFDLASL---------------DPRVTVCDMAQVPLEDESVDVAVFCLSL-MGTN-IRDFLEEANRVLKPGGLLKV 149 (215)
T ss_dssp SCEEEEESSCS---------------STTEEESCTTSCSCCTTCEEEEEEESCC-CSSC-HHHHHHHHHHHEEEEEEEEE
T ss_pred ccEEEEeCCCC---------------CceEEEeccccCCCCCCCEeEEEEehhc-cccC-HHHHHHHHHHhCCCCeEEEE
Confidence 56677766654 2345677888999999999999999998 5544 44599999999999999999
Q ss_pred ecCCCCCCCchhHHHHHHHHHHhcceEEeee
Q 009719 233 SGPPVQWPKQDKEWADLQAVARALCYELIAV 263 (527)
Q Consensus 233 S~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~ 263 (527)
+.+..... .-+.+.++.+...++.+..
T Consensus 150 ~~~~~~~~----~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 150 AEVSSRFE----DVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp EECGGGCS----CHHHHHHHHHHTTEEEEEE
T ss_pred EEcCCCCC----CHHHHHHHHHHCCCEEEEE
Confidence 87632211 2344555666666766553
|
| >3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440} | Back alignment and structure |
|---|
Probab=98.35 E-value=3.2e-07 Score=84.51 Aligned_cols=133 Identities=15% Similarity=0.185 Sum_probs=87.9
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcccccccc----ccCCCCCCCC-CccchhhhcCccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGLIGVYH----DWCEPFSTYP-RTYDLIHVSGIESLI 448 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGLiG~~h----dwce~fstYP-rtyDLiHa~~~fs~~ 448 (527)
.+|||+|||.|.++.+|.+...- |+-+|-. ..+..+-+++.+...+ +..+. +..+ .+||+|.+..++. .
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~fD~v~~~~~l~-~ 128 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADRGIE---AVGVDGDRTLVDAARAAGAGEVHLASYAQLAEA-KVPVGKDYDLICANFALL-H 128 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTTTCE---EEEEESCHHHHHHHHHTCSSCEEECCHHHHHTT-CSCCCCCEEEEEEESCCC-S
T ss_pred CEEEEeCCCCCHHHHHHHHCCCE---EEEEcCCHHHHHHHHHhcccccchhhHHhhccc-ccccCCCccEEEECchhh-h
Confidence 78999999999999999888653 3333433 5666677775432222 22111 2233 5699999987776 3
Q ss_pred cCCCCCCCCCcccccceeecccccCCcEEEEeCCH--------------------------------HHHHHHHHHHhcC
Q 009719 449 KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP--------------------------------EVIDKVSRIANTV 496 (527)
Q Consensus 449 ~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~--------------------------------~~~~~i~~i~~~l 496 (527)
. +...+|-|+-|+|+|||++++.+.. ...+.+.++++.-
T Consensus 129 ~---------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 199 (227)
T 3e8s_A 129 Q---------DIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMA 199 (227)
T ss_dssp S---------CCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHT
T ss_pred h---------hHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHc
Confidence 2 3468999999999999999997420 0467888888988
Q ss_pred CceeEEecCCCCCC---CCceEEEEEec
Q 009719 497 RWTAAVHDKEPGSN---GREKILVATKS 521 (527)
Q Consensus 497 ~W~~~~~~~e~~~~---~~ekiLi~~K~ 521 (527)
-+++........+. ...-+++++|.
T Consensus 200 Gf~~~~~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 200 GLRLVSLQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp TEEEEEEECCCCTTCSSCSCEEEEEEEC
T ss_pred CCeEEEEecCCCCCCCCceeEEEEeecC
Confidence 89876543211111 12456777763
|
| >2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=4.2e-07 Score=89.85 Aligned_cols=86 Identities=8% Similarity=0.047 Sum_probs=64.5
Q ss_pred hccccccccC-CeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCccccccc-ChHH
Q 009719 144 ASFGGSMLSE-NILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA-YNAT 215 (527)
Q Consensus 144 gsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d-~~~~ 215 (527)
|.++.+|..+ +.. +...|.++.|++.|+++ |+. +.+..+|...+| ++||+|+|..+++|+.. +...
T Consensus 102 G~~~~~la~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~ 175 (318)
T 2fk8_A 102 GTTMRRAVERFDVN---VIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAFEHFGHENYDD 175 (318)
T ss_dssp SHHHHHHHHHHCCE---EEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCGGGTCGGGHHH
T ss_pred hHHHHHHHHHCCCE---EEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeChHHhcCHHHHHH
Confidence 3344445544 543 33347788999999876 432 567778888876 89999999999999853 3345
Q ss_pred HHHHHhhcccCCcEEEEecC
Q 009719 216 YLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p 235 (527)
+|.|+.|+|||||+++++.+
T Consensus 176 ~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 176 FFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp HHHHHHHHSCTTCEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEEe
Confidence 99999999999999999886
|
| >2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.34 E-value=1.3e-06 Score=80.95 Aligned_cols=150 Identities=15% Similarity=0.191 Sum_probs=95.0
Q ss_pred cccchhhHHHHHHHHHHHHHh-----------hhcc-CCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCCCchhH
Q 009719 345 DVFEADSRRWRRRVAYYKNTL-----------NVKL-GTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSV 412 (527)
Q Consensus 345 ~~f~~d~~~W~~~v~~Y~~~l-----------~~~i-~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~ntl~v 412 (527)
+.|..+.+.|......|.... ...+ ....-.+|||+|||.|.++..|. ..|..+-+-+. .+.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~----~~~~ 101 (215)
T 2zfu_A 27 RLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIARDLRQRPASLVVADFGCGDCRLASSIR-NPVHCFDLASL----DPRV 101 (215)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHTSCTTSCEEEETCTTCHHHHHCC-SCEEEEESSCS----STTE
T ss_pred HHHHHhHHHHHHHHHHHHhhhcccchhHHHHHHHHHhccCCCCeEEEECCcCCHHHHHhh-ccEEEEeCCCC----CceE
Confidence 447777778877666664421 1111 11233579999999999999884 44554444333 1111
Q ss_pred hhhccccccccccCCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHH---HHHHH
Q 009719 413 IYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPE---VIDKV 489 (527)
Q Consensus 413 i~eRGLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~---~~~~i 489 (527)
. .+ |. +.++.-+.+||+|.+..++. +. +...+|-|+-|+|+|||.+++.+-.. ..+++
T Consensus 102 --~---~~---d~-~~~~~~~~~fD~v~~~~~l~-~~---------~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~ 162 (215)
T 2zfu_A 102 --T---VC---DM-AQVPLEDESVDVAVFCLSLM-GT---------NIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTF 162 (215)
T ss_dssp --E---ES---CT-TSCSCCTTCEEEEEEESCCC-SS---------CHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHH
T ss_pred --E---Ee---cc-ccCCCCCCCEeEEEEehhcc-cc---------CHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHH
Confidence 1 11 21 11222247899999987774 22 34788999999999999999986443 45678
Q ss_pred HHHHhcCCceeEEecCCCCCCCCceEEEEEec
Q 009719 490 SRIANTVRWTAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 490 ~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
.++++..-+++...+...+ .-.+++++|.
T Consensus 163 ~~~l~~~Gf~~~~~~~~~~---~~~~~~~~k~ 191 (215)
T 2zfu_A 163 LRAVTKLGFKIVSKDLTNS---HFFLFDFQKT 191 (215)
T ss_dssp HHHHHHTTEEEEEEECCST---TCEEEEEEEC
T ss_pred HHHHHHCCCEEEEEecCCC---eEEEEEEEec
Confidence 8888888888766543322 3467888885
|
| >3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15} | Back alignment and structure |
|---|
Probab=98.34 E-value=2.3e-07 Score=86.98 Aligned_cols=87 Identities=16% Similarity=0.112 Sum_probs=65.2
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecC-cccccccC--hHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSR-CLIPFTAY--NATY 216 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~-~l~hw~d~--~~~a 216 (527)
|.++..|..+ . .+...|.++.+++.|+++ +....+..+|...+|++ ++||+|+|.. +++|+.+. ...+
T Consensus 45 G~~~~~l~~~-~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~~ 119 (243)
T 3d2l_A 45 GTATLLLADH-Y---EVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDSLNYLQTEADVKQT 119 (243)
T ss_dssp CHHHHHHTTT-S---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGGCCSHHHHHHH
T ss_pred CHHHHHHhhC-C---eEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchhhcCCHHHHHHH
Confidence 4444445554 2 344447788899888765 34567778898899987 8999999987 88777432 2349
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
|.++.|+|||||+++++.+
T Consensus 120 l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 120 FDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHhcCCCeEEEEEcC
Confidence 9999999999999999876
|
| >3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A* | Back alignment and structure |
|---|
Probab=98.31 E-value=4.7e-07 Score=86.76 Aligned_cols=152 Identities=14% Similarity=0.107 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc--cccccccccCCCCC
Q 009719 354 WRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR--GLIGVYHDWCEPFS 430 (527)
Q Consensus 354 W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR--GLiG~~hdwce~fs 430 (527)
|...+....+.+...+.. -.+|||+|||.|.++..|.+... +|+-+|-. ..+..+-++ ++-=+..|.. .++
T Consensus 33 ~~~~~~~~~~~l~~~~~~--~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~~ 106 (263)
T 3pfg_A 33 YHREAADLAALVRRHSPK--AASLLDVACGTGMHLRHLADSFG---TVEGLELSADMLAIARRRNPDAVLHHGDMR-DFS 106 (263)
T ss_dssp HHHHHHHHHHHHHHHCTT--CCEEEEETCTTSHHHHHHTTTSS---EEEEEESCHHHHHHHHHHCTTSEEEECCTT-TCC
T ss_pred HHHHHHHHHHHHHhhCCC--CCcEEEeCCcCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhCCCCEEEECChH-HCC
Confidence 334333334444433333 36899999999999999988753 34444433 555555554 2211122322 233
Q ss_pred CCCCccchhhhcC-ccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC---------------------------
Q 009719 431 TYPRTYDLIHVSG-IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS--------------------------- 482 (527)
Q Consensus 431 tYPrtyDLiHa~~-~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~--------------------------- 482 (527)
. +.+||+|.+.. +|.... +.-++..+|-++-|+|+|||.++|.+-
T Consensus 107 ~-~~~fD~v~~~~~~l~~~~------~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (263)
T 3pfg_A 107 L-GRRFSAVTCMFSSIGHLA------GQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVS 179 (263)
T ss_dssp C-SCCEEEEEECTTGGGGSC------HHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEE
T ss_pred c-cCCcCEEEEcCchhhhcC------CHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEE
Confidence 2 78999999986 776542 112345779999999999999999520
Q ss_pred -------------------H---------------HHHHHHHHHHhcCCceeEEecCCCCCCCCceEEEEEec
Q 009719 483 -------------------P---------------EVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 483 -------------------~---------------~~~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
. -..++++++++.--+++...... .....++|++|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~---~~~~~~~va~K~ 249 (263)
T 3pfg_A 180 HSSREGEATRIEVHYLVAGPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGG---PSGRGLFTGLPG 249 (263)
T ss_dssp EEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESST---TTSSCEEEEEEC
T ss_pred EEEecCcEEEEEEEEEEecCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCC---CCCceeEEEecC
Confidence 0 02678999999888887665332 234568999996
|
| >3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=98.29 E-value=4e-07 Score=86.01 Aligned_cols=82 Identities=12% Similarity=0.125 Sum_probs=63.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccc-cCCCCC-CCcccEEEecCcccccccChHHHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGT-RRLPFP-AFSFDIVHCSRCLIPFTAYNATYLIEV 220 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~da-e~LPFp-D~SFDlV~cs~~l~hw~d~~~~aL~Ei 220 (527)
.|.++.+|..++..++.+ |.++.+++.|+++...+.+.++|. +.+||+ +++||+|+|+ .+... +|.++
T Consensus 59 ~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------~~~~~-~l~~~ 128 (226)
T 3m33_A 59 HGPDAARFGPQAARWAAY---DFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR------RGPTS-VILRL 128 (226)
T ss_dssp TSHHHHHHGGGSSEEEEE---ESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE------SCCSG-GGGGH
T ss_pred CCHHHHHHHHcCCEEEEE---ECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC------CCHHH-HHHHH
Confidence 455555666666544444 888999999999865677888887 789999 9999999987 23334 89999
Q ss_pred hhcccCCcEEEEec
Q 009719 221 DRLLRPGGYLVISG 234 (527)
Q Consensus 221 ~RVLRPGG~lviS~ 234 (527)
.|+|||||+|+...
T Consensus 129 ~~~LkpgG~l~~~~ 142 (226)
T 3m33_A 129 PELAAPDAHFLYVG 142 (226)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHHcCCCcEEEEeC
Confidence 99999999999433
|
| >3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=1.2e-06 Score=79.33 Aligned_cols=90 Identities=14% Similarity=0.103 Sum_probs=60.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccCCC-CCCCcccEEEecCccccc-------
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLP-FPAFSFDIVHCSRCLIPF------- 209 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LP-FpD~SFDlV~cs~~l~hw------- 209 (527)
.|.++..|..++..+..+ |.++.+++.|+++ +++ +.+...+.+.++ +++++||+|+++....|.
T Consensus 33 ~G~~~~~la~~~~~v~~v---D~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~~~~~~~~~~ 109 (185)
T 3mti_A 33 NGNDTAFLAGLSKKVYAF---DVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYLPSADKSVIT 109 (185)
T ss_dssp TSHHHHHHHTTSSEEEEE---ESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-----------
T ss_pred CCHHHHHHHHhCCEEEEE---ECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCCCCcchhccc
Confidence 455555666665444444 7788999988765 443 456666777764 668999999987433332
Q ss_pred -ccChHHHHHHHhhcccCCcEEEEecC
Q 009719 210 -TAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 210 -~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+....+|.|+.|+|||||++++...
T Consensus 110 ~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 110 KPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 12223489999999999999999764
|
| >3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=2.5e-07 Score=91.58 Aligned_cols=90 Identities=18% Similarity=0.157 Sum_probs=63.0
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcC------------CCcEEeeccccCCC----CC--CCcccEEEecCc
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERG------------IPAFVAMLGTRRLP----FP--AFSFDIVHCSRC 205 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg------------~pa~~~v~dae~LP----Fp--D~SFDlV~cs~~ 205 (527)
|.++..|...+.. .+...|.++.|++.|+++. ..+.+.++|.+.+| |+ +++||+|+|+.+
T Consensus 46 G~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~ 123 (313)
T 3bgv_A 46 GGDLLKWKKGRIN--KLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFV 123 (313)
T ss_dssp TTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETC
T ss_pred cHHHHHHHhcCCC--EEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCCCEEEEEEecc
Confidence 3334444444321 3334477888998887652 13567788988886 75 459999999998
Q ss_pred ccccccC---hHHHHHHHhhcccCCcEEEEecC
Q 009719 206 LIPFTAY---NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 206 l~hw~d~---~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+++..++ ...+|.++.|+|||||+|+++.+
T Consensus 124 l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 124 CHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp GGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 7544122 23599999999999999999987
|
| >1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=2e-07 Score=90.46 Aligned_cols=98 Identities=13% Similarity=0.107 Sum_probs=65.3
Q ss_pred eeeEeecCCCccchhhhcc-CCCeeEEEecCCCCC-CchhHhhhc----cccccccccCCCCCCCCCccchhhhcCcccc
Q 009719 374 IRNIMDMNAFFGGFAAALT-SDPVWVMNVVPARKS-STLSVIYDR----GLIGVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~-~~~VwvMnvvp~~~~-ntl~vi~eR----GLiG~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
-..|||+|||.|+++..|. ..+. +|+-++-. +.+..+-++ |+..-..-.+..+..+|.+||+|.+..+|.+
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~v~~~~~l~~ 141 (287)
T 1kpg_A 65 GMTLLDVGCGWGATMMRAVEKYDV---NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSIGAFEH 141 (287)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEEEESCGGG
T ss_pred cCEEEEECCcccHHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeEEEEeCchhh
Confidence 3589999999999998886 3344 33333332 555555544 4321111112222335689999999998886
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.. .-+...+|-|+-|+|+|||.+++.+
T Consensus 142 ~~-------~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 142 FG-------HERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp TC-------TTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred cC-------hHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 62 1245789999999999999999975
|
| >3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A | Back alignment and structure |
|---|
Probab=98.23 E-value=1.2e-06 Score=81.49 Aligned_cols=160 Identities=14% Similarity=0.105 Sum_probs=92.6
Q ss_pred cchhhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCC--eeEEEecCCCCC-CchhHhhhc-------
Q 009719 347 FEADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDP--VWVMNVVPARKS-STLSVIYDR------- 416 (527)
Q Consensus 347 f~~d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~--VwvMnvvp~~~~-ntl~vi~eR------- 416 (527)
|+.-......+.+...+.+.. ..-.+|||+|||.|.++.+|.+.. .-| +-+|-. ..+..+-++
T Consensus 7 ~~~~~~~~~~~~~~l~~~l~~----~~~~~vLDiGcG~G~~~~~l~~~~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~ 79 (219)
T 3jwg_A 7 TEKKLNLNQQRLGTVVAVLKS----VNAKKVIDLGCGEGNLLSLLLKDKSFEQI---TGVDVSYSVLERAKDRLKIDRLP 79 (219)
T ss_dssp -----CHHHHHHHHHHHHHHH----TTCCEEEEETCTTCHHHHHHHTSTTCCEE---EEEESCHHHHHHHHHHHTGGGSC
T ss_pred CCcCCcchHHHHHHHHHHHhh----cCCCEEEEecCCCCHHHHHHHhcCCCCEE---EEEECCHHHHHHHHHHHHhhccc
Confidence 333334445555554454431 223589999999999999997653 222 222322 344444333
Q ss_pred -----cccccccccCCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHH-------
Q 009719 417 -----GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPE------- 484 (527)
Q Consensus 417 -----GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~------- 484 (527)
.+-=+..|. +..+.-+.+||+|-+..++.... .-.+..+|-|+-|+|+|||.+|+....+
T Consensus 80 ~~~~~~v~~~~~d~-~~~~~~~~~fD~V~~~~~l~~~~-------~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~ 151 (219)
T 3jwg_A 80 EMQRKRISLFQSSL-VYRDKRFSGYDAATVIEVIEHLD-------ENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGN 151 (219)
T ss_dssp HHHHTTEEEEECCS-SSCCGGGTTCSEEEEESCGGGCC-------HHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCC
T ss_pred cccCcceEEEeCcc-cccccccCCCCEEEEHHHHHhCC-------HHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcc
Confidence 221112232 12222237899999998888653 1123578999999999999887753221
Q ss_pred ---------------HHHH----HHHHHhcCCceeEEe---cCCCCCCCCceEEEEEec
Q 009719 485 ---------------VIDK----VSRIANTVRWTAAVH---DKEPGSNGREKILVATKS 521 (527)
Q Consensus 485 ---------------~~~~----i~~i~~~l~W~~~~~---~~e~~~~~~ekiLi~~K~ 521 (527)
..++ +++++..--+++... +..+.-....+|.|++|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~~~~g~~~~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 152 LFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVRFLQIGEIDDEFGSPTQMGVFTLG 210 (219)
T ss_dssp T-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEEEEESCCCTTSCCSEEEEEEEEC
T ss_pred cCcccccccCceeeecHHHHHHHHHHHHHHCCcEEEEEecCCccccCCCCeEEEEEecc
Confidence 1222 337777778887765 333333456789999986
|
| >1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=98.23 E-value=1.1e-06 Score=83.27 Aligned_cols=89 Identities=16% Similarity=0.148 Sum_probs=65.5
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCccccccc--ChHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA--YNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d--~~~~a 216 (527)
.|.++..|..++..+ ...|.++.+++.|+++ +..+.+.++|...+|++ ++||+|+|..+.+|+.. ....+
T Consensus 52 ~G~~~~~l~~~~~~v---~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~ 127 (252)
T 1wzn_A 52 TGIPTLELAERGYEV---VGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYFDEEDLRKL 127 (252)
T ss_dssp TCHHHHHHHHTTCEE---EEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGGSCHHHHHHH
T ss_pred CCHHHHHHHHCCCeE---EEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchhcCCHHHHHHH
Confidence 344555666666543 3447888999988764 45677888899889986 78999998755444332 22359
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
|.++.|+|||||.|++..+
T Consensus 128 l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 128 FSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCeEEEEecc
Confidence 9999999999999999876
|
| >3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} | Back alignment and structure |
|---|
Probab=98.21 E-value=6.7e-06 Score=73.29 Aligned_cols=84 Identities=15% Similarity=0.109 Sum_probs=58.6
Q ss_pred hccccccccC--CeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccc-cCCCCCCCcccEEEecCcccccccChHH
Q 009719 144 ASFGGSMLSE--NILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGT-RRLPFPAFSFDIVHCSRCLIPFTAYNAT 215 (527)
Q Consensus 144 gsfga~Ll~r--~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~da-e~LPFpD~SFDlV~cs~~l~hw~d~~~~ 215 (527)
|.++.++..+ +.. +...|.++.+++.|+++ +.+ ..+..+++ +.+|..+++||+|++..+++| . .
T Consensus 37 G~~~~~l~~~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~~~~----~-~ 108 (178)
T 3hm2_A 37 GSIAIEWLRSTPQTT---AVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGLTA----P-G 108 (178)
T ss_dssp THHHHHHHTTSSSEE---EEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC-TTC----T-T
T ss_pred CHHHHHHHHHCCCCe---EEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCcccH----H-H
Confidence 4444444554 333 33447888999998865 454 22555565 455555589999999998865 3 3
Q ss_pred HHHHHhhcccCCcEEEEecC
Q 009719 216 YLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p 235 (527)
++.++.|+|||||+++++..
T Consensus 109 ~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 109 VFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp HHHHHHHTCCTTCEEEEEEC
T ss_pred HHHHHHHhcCCCCEEEEEee
Confidence 99999999999999999875
|
| >2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=2.3e-07 Score=84.08 Aligned_cols=116 Identities=16% Similarity=0.235 Sum_probs=73.5
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc--cc-cccccCCCCCCCCCccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL--IG-VYHDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL--iG-~~hdwce~fstYPrtyDLiHa~~~fs 446 (527)
.+|||+|||.|.++..|.+... +|+-.|.. ..+..+-+ .|+ +- +..|..+ ++. +.+||+|.+..++.
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~-~~~~D~v~~~~~l~ 108 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAANGY---DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNN-LTF-DRQYDFILSTVVLM 108 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGG-CCC-CCCEEEEEEESCGG
T ss_pred CeEEEEcCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhh-CCC-CCCceEEEEcchhh
Confidence 4899999999999999977654 23333322 33333322 233 11 2223322 232 78999999998887
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeCC--------------HHHHHHHHHHHhcCCceeEEec
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS--------------PEVIDKVSRIANTVRWTAAVHD 504 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~--------------~~~~~~i~~i~~~l~W~~~~~~ 504 (527)
... .=....+|-++-|+|+|||.+++-+. .-..+++++++.. |++....
T Consensus 109 ~~~-------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~ 171 (199)
T 2xvm_A 109 FLE-------AKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYN 171 (199)
T ss_dssp GSC-------GGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred hCC-------HHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEec
Confidence 542 22356789999999999999877431 0024567777776 8876553
|
| >3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.19 E-value=2e-06 Score=97.96 Aligned_cols=93 Identities=17% Similarity=0.124 Sum_probs=69.9
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----------CCC-cEEeeccccCCCCCCCcccEEEecCccccccc
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----------GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA 211 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----------g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d 211 (527)
.|.++..|..++.....+...|.++.|++.|+++ +.+ +.+.++|+..+|+++++||+|+|..+++|+.+
T Consensus 732 TG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV~~eVLeHL~d 811 (950)
T 3htx_A 732 SGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGTCLEVIEHMEE 811 (950)
T ss_dssp SSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEEEESCGGGSCH
T ss_pred CCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEEEeCchhhCCh
Confidence 4444445555551111233337888999999772 333 56788999999999999999999999999887
Q ss_pred ChH-HHHHHHhhcccCCcEEEEecCC
Q 009719 212 YNA-TYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 212 ~~~-~aL~Ei~RVLRPGG~lviS~pp 236 (527)
... .++.|+.|+|||| .+++++|.
T Consensus 812 p~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 812 DQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp HHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred HHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 553 4899999999999 99998874
|
| >3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.19 E-value=7.5e-07 Score=88.02 Aligned_cols=56 Identities=20% Similarity=0.154 Sum_probs=42.3
Q ss_pred cEEeeccccCC-----CCCCCcccEEEecCcccccc----c-ChHHHHHHHhhcccCCcEEEEecC
Q 009719 180 AFVAMLGTRRL-----PFPAFSFDIVHCSRCLIPFT----A-YNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 180 a~~~v~dae~L-----PFpD~SFDlV~cs~~l~hw~----d-~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.+.++|.... ++.+++||+|+|..+++|++ + ....+|+++.|+|||||+|++...
T Consensus 156 v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 156 VVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp EEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred ceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 44555665433 47899999999999885553 1 123499999999999999999865
|
| >3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=4.3e-07 Score=89.26 Aligned_cols=101 Identities=12% Similarity=0.125 Sum_probs=68.0
Q ss_pred eeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhc----ccc----ccccccCCCCCCCCCccchhhhcC
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDR----GLI----GVYHDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eR----GLi----G~~hdwce~fstYPrtyDLiHa~~ 443 (527)
-.+|||+|||.|+++..|.+. +. +|+-+|-. ..+..+-++ |+- -+..|+.+ ++.+||+|.+..
T Consensus 73 ~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~fD~v~~~~ 145 (302)
T 3hem_A 73 GMTLLDIGCGWGSTMRHAVAEYDV---NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE----FDEPVDRIVSLG 145 (302)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCC---EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG----CCCCCSEEEEES
T ss_pred cCEEEEeeccCcHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH----cCCCccEEEEcc
Confidence 458999999999999998766 53 23333332 555555444 442 12233322 279999999999
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+|....+|......-....+|-|+-|+|+|||.+++.+
T Consensus 146 ~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 146 AFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp CGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred hHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 99877532211122345689999999999999999975
|
| >3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=98.16 E-value=7.4e-07 Score=81.77 Aligned_cols=133 Identities=11% Similarity=0.052 Sum_probs=88.7
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc--ccccccccCCCCCCCCCccchhhhcCccccccCC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG--LIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNP 451 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG--LiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~ 451 (527)
.+|||+|||.|.++..|.....- |+-+|-. ..+..+-++. +-=+..|.. .++.-+.+||+|.+..++..+.
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~-- 116 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLGHQ---IEGLEPATRLVELARQTHPSVTFHHGTIT-DLSDSPKRWAGLLAWYSLIHMG-- 116 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTTCC---EEEECCCHHHHHHHHHHCTTSEEECCCGG-GGGGSCCCEEEEEEESSSTTCC--
T ss_pred CeEEEecCCCCHHHHHHHhcCCe---EEEEeCCHHHHHHHHHhCCCCeEEeCccc-ccccCCCCeEEEEehhhHhcCC--
Confidence 47999999999999999777543 3333433 5555555552 111112222 2232248999999998887652
Q ss_pred CCCCCCCcccccceeecccccCCcEEEEeCCH----------------HHHHHHHHHHhcCCceeEEecCCCCCCCCceE
Q 009719 452 GSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP----------------EVIDKVSRIANTVRWTAAVHDKEPGSNGREKI 515 (527)
Q Consensus 452 ~~~~~rC~~~~illEmDRILRP~G~~iird~~----------------~~~~~i~~i~~~l~W~~~~~~~e~~~~~~eki 515 (527)
.-+...+|-|+-|+|+|||.+++.+.. -..++++++++..-|++......++ .+...
T Consensus 117 -----~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~--~p~~~ 189 (203)
T 3h2b_A 117 -----PGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR--FPHAY 189 (203)
T ss_dssp -----TTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT--SSEEE
T ss_pred -----HHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC--Ccchh
Confidence 234578999999999999999998511 1367888999999999876655444 34555
Q ss_pred EEEEe
Q 009719 516 LVATK 520 (527)
Q Consensus 516 Li~~K 520 (527)
|+..|
T Consensus 190 l~~~~ 194 (203)
T 3h2b_A 190 LTAEA 194 (203)
T ss_dssp EEEEE
T ss_pred hhhhh
Confidence 55444
|
| >3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.15 E-value=5.9e-07 Score=85.00 Aligned_cols=89 Identities=9% Similarity=-0.074 Sum_probs=64.7
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcCC--CcEEeeccccCCCCCC-----CcccEEEecCcccccccC-hHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI--PAFVAMLGTRRLPFPA-----FSFDIVHCSRCLIPFTAY-NAT 215 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~--pa~~~v~dae~LPFpD-----~SFDlV~cs~~l~hw~d~-~~~ 215 (527)
|.++..|..++. .+...|.++.+++.|+++.. .+.+.++|...++++. .+||+|+|..+++|+... ...
T Consensus 68 G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~ 144 (245)
T 3ggd_A 68 GTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFHHIPVEKREL 144 (245)
T ss_dssp SHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSSTTSCGGGHHH
T ss_pred CHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcchhhcCCHHHHHH
Confidence 444445555544 23334778899999988743 4567788888876543 349999999998887632 235
Q ss_pred HHHHHhhcccCCcEEEEecC
Q 009719 216 YLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p 235 (527)
+|.|+.|+|||||++++...
T Consensus 145 ~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 145 LGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp HHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEeC
Confidence 99999999999999988765
|
| >3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=98.15 E-value=1.8e-06 Score=85.76 Aligned_cols=89 Identities=15% Similarity=-0.009 Sum_probs=65.3
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCC-----CCCcccEEEecCcccccccCh-HHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPF-----PAFSFDIVHCSRCLIPFTAYN-ATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPF-----pD~SFDlV~cs~~l~hw~d~~-~~a 216 (527)
+|.++..|..++..+.. .|.++.|++.|+++.... ....+.+.+++ .+++||+|+|+.+++|+...+ ..+
T Consensus 56 tG~~a~~La~~g~~V~g---vD~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~ 131 (261)
T 3iv6_A 56 TRFLIEKALERGASVTV---FDFSQRMCDDLAEALADR-CVTIDLLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRA 131 (261)
T ss_dssp CHHHHHHHHHTTCEEEE---EESCHHHHHHHHHHTSSS-CCEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHH
T ss_pred chHHHHHHHhcCCEEEE---EECCHHHHHHHHHHHHhc-cceeeeeecccccccccCCCccEEEEhhhhHhCCHHHHHHH
Confidence 45566667777764444 488999999999875332 23344444444 268999999999999886543 359
Q ss_pred HHHHhhcccCCcEEEEecCC
Q 009719 217 LIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~pp 236 (527)
|.++.|+| |||++++|.+.
T Consensus 132 l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 132 CLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp HHHHHHHH-TTSEEEEEEEB
T ss_pred HHHHHHhC-cCcEEEEEecc
Confidence 99999999 99999999864
|
| >1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4 | Back alignment and structure |
|---|
Probab=98.15 E-value=1e-05 Score=72.39 Aligned_cols=88 Identities=13% Similarity=0.051 Sum_probs=62.1
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC---cEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP---AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p---a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
|.++..+..++.. +...|.++.+++.|+++ +++ ..+..+|... ++++++||+|+|...++|-.+....+
T Consensus 64 G~~~~~~~~~~~~---v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~~~~~~~~~~~~ 139 (194)
T 1dus_A 64 GVIGIALADEVKS---TTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNPPIRAGKEVLHRI 139 (194)
T ss_dssp SHHHHHHGGGSSE---EEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEECCCSTTCHHHHHHH
T ss_pred CHHHHHHHHcCCe---EEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-ccccCCceEEEECCCcccchhHHHHH
Confidence 4444455555443 33337778888888765 454 5667777655 56688999999988765423333459
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
+.++.|+|||||++++..+
T Consensus 140 l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 140 IEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCCEEEEEEC
Confidence 9999999999999999887
|
| >1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53 | Back alignment and structure |
|---|
Probab=98.12 E-value=8.9e-06 Score=75.91 Aligned_cols=94 Identities=17% Similarity=0.182 Sum_probs=64.4
Q ss_pred cChHHHHHHHHHc----CC-CcEEeeccccCCC--CCCCcccEEEecCcccccccCh--------HHHHHHHhhcccCCc
Q 009719 164 DSHKAQIQFALER----GI-PAFVAMLGTRRLP--FPAFSFDIVHCSRCLIPFTAYN--------ATYLIEVDRLLRPGG 228 (527)
Q Consensus 164 D~seaqvq~A~eR----g~-pa~~~v~dae~LP--FpD~SFDlV~cs~~l~hw~d~~--------~~aL~Ei~RVLRPGG 228 (527)
|.++.+++.|+++ ++ .+.+..+|+..++ |++++||+|++.... +|.... ..+|.++.|+|||||
T Consensus 72 D~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 150 (214)
T 1yzh_A 72 DIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFSD-PWPKKRHEKRRLTYKTFLDTFKRILPENG 150 (214)
T ss_dssp ESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESCC-CCCSGGGGGGSTTSHHHHHHHHHHSCTTC
T ss_pred EcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECCC-CccccchhhhccCCHHHHHHHHHHcCCCc
Confidence 6677888887754 44 3567788888888 899999999998653 443311 249999999999999
Q ss_pred EEEEecCCCCCCCchhHHHHHHHHHHhcceEEeeee
Q 009719 229 YLVISGPPVQWPKQDKEWADLQAVARALCYELIAVD 264 (527)
Q Consensus 229 ~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~~ 264 (527)
.|++.+.. ..-.+.+.++.+...|+.....
T Consensus 151 ~l~~~~~~------~~~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 151 EIHFKTDN------RGLFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp EEEEEESC------HHHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEEEeCC------HHHHHHHHHHHHHCCCeeeecc
Confidence 99998752 1112344444444456654433
|
| >2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A | Back alignment and structure |
|---|
Probab=98.12 E-value=8.8e-07 Score=82.52 Aligned_cols=92 Identities=21% Similarity=0.349 Sum_probs=62.2
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc---cccccccccCCCCCCCCCccchhhhcCccccccCC
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR---GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNP 451 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR---GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~ 451 (527)
+|||+|||.|.++..|.+..- +|+-+|.. ..+..+-++ ++--+..|..+.+ .+.+||+|++.+++.+..
T Consensus 45 ~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~--~~~~fD~v~~~~~l~~~~-- 117 (250)
T 2p7i_A 45 NLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQ--LPRRYDNIVLTHVLEHID-- 117 (250)
T ss_dssp CEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCC--CSSCEEEEEEESCGGGCS--
T ss_pred cEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcC--cCCcccEEEEhhHHHhhc--
Confidence 599999999999999977643 22223332 444444444 2211122222221 358999999999888664
Q ss_pred CCCCCCCcccccceeec-ccccCCcEEEEeC
Q 009719 452 GSNKNSCSLVDLMVEMD-RMLRPEGTVVVRD 481 (527)
Q Consensus 452 ~~~~~rC~~~~illEmD-RILRP~G~~iird 481 (527)
+...+|-|+- |+|+|||++++.+
T Consensus 118 -------~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 118 -------DPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp -------SHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred -------CHHHHHHHHHHHhcCCCCEEEEEc
Confidence 2367999999 9999999999975
|
| >2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53 | Back alignment and structure |
|---|
Probab=98.12 E-value=7.3e-06 Score=77.30 Aligned_cols=71 Identities=14% Similarity=0.185 Sum_probs=55.3
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCC--CCCCcccEEEecCcccccccC--------hHHHHHHHhhcccCCc
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLP--FPAFSFDIVHCSRCLIPFTAY--------NATYLIEVDRLLRPGG 228 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LP--FpD~SFDlV~cs~~l~hw~d~--------~~~aL~Ei~RVLRPGG 228 (527)
|.++.+++.|+++ +++ +.+..+|+..++ |++++||.|++.... +|... ...+|.++.|+|||||
T Consensus 69 D~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~~-p~~~~~~~~~rl~~~~~l~~~~~~LkpgG 147 (213)
T 2fca_A 69 ELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFSD-PWPKKRHEKRRLTYSHFLKKYEEVMGKGG 147 (213)
T ss_dssp CSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESCC-CCCSGGGGGGSTTSHHHHHHHHHHHTTSC
T ss_pred EechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECCC-CCcCccccccccCcHHHHHHHHHHcCCCC
Confidence 7788898888764 554 567788888887 889999999876543 45432 1348999999999999
Q ss_pred EEEEecC
Q 009719 229 YLVISGP 235 (527)
Q Consensus 229 ~lviS~p 235 (527)
+|++.+.
T Consensus 148 ~l~~~td 154 (213)
T 2fca_A 148 SIHFKTD 154 (213)
T ss_dssp EEEEEES
T ss_pred EEEEEeC
Confidence 9999874
|
| >1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=2.7e-06 Score=84.92 Aligned_cols=77 Identities=17% Similarity=0.209 Sum_probs=60.5
Q ss_pred eeccCcChHHHHHHHHHcC--------C----------------------------CcEEeeccccCCCCC-CCcccEEE
Q 009719 159 SFAPRDSHKAQIQFALERG--------I----------------------------PAFVAMLGTRRLPFP-AFSFDIVH 201 (527)
Q Consensus 159 siAp~D~seaqvq~A~eRg--------~----------------------------pa~~~v~dae~LPFp-D~SFDlV~ 201 (527)
.|...|+++++++.|++.- + .+.+.++|....||+ ++.||+|+
T Consensus 139 ~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~ 218 (274)
T 1af7_A 139 KVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIF 218 (274)
T ss_dssp EEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEE
T ss_pred EEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCCCCCCcCCCeeEEE
Confidence 5566689999999998741 0 234566777777787 78999999
Q ss_pred ecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 202 CSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 202 cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|..+++|+.+.. ..++.+++++|||||+|++...
T Consensus 219 crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~s 253 (274)
T 1af7_A 219 CRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHS 253 (274)
T ss_dssp ECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECTT
T ss_pred ECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEec
Confidence 999998886543 3599999999999999999554
|
| >3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.08 E-value=3.9e-06 Score=85.47 Aligned_cols=70 Identities=20% Similarity=0.184 Sum_probs=56.7
Q ss_pred cChHHHHHHHHHc----CC--CcEEeeccccCC--CCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALER----GI--PAFVAMLGTRRL--PFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eR----g~--pa~~~v~dae~L--PFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|. +.+++.|+++ ++ .+.+..+|.... |+| ++||+|+++.+++||.+.. ..+|+++.|+|||||+|++..
T Consensus 210 D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 210 DL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp EC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred eC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 66 6788888875 33 256777887664 787 8999999999999998765 348999999999999999977
Q ss_pred C
Q 009719 235 P 235 (527)
Q Consensus 235 p 235 (527)
+
T Consensus 288 ~ 288 (363)
T 3dp7_A 288 T 288 (363)
T ss_dssp C
T ss_pred e
Confidence 5
|
| >3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=98.08 E-value=1.5e-05 Score=74.49 Aligned_cols=95 Identities=14% Similarity=0.105 Sum_probs=62.6
Q ss_pred cCcChHHHHHHHHHc----CCCcEEeeccccC-CCCCCCcccEEEecCcccccccC------------------hHHHHH
Q 009719 162 PRDSHKAQIQFALER----GIPAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAY------------------NATYLI 218 (527)
Q Consensus 162 p~D~seaqvq~A~eR----g~pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~------------------~~~aL~ 218 (527)
..|.++.+++.|+++ ++.+.+.++|+.. .++++++||+|+|.-..++..+. ...+|.
T Consensus 84 ~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 163 (230)
T 3evz_A 84 ATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLE 163 (230)
T ss_dssp EEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHH
Confidence 336778888888754 5556777788643 46788999999998655443220 134899
Q ss_pred HHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEe
Q 009719 219 EVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELI 261 (527)
Q Consensus 219 Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~ 261 (527)
++.|+|||||++++..+.. ....+.+.++.+...|+..
T Consensus 164 ~~~~~LkpgG~l~~~~~~~-----~~~~~~~~~~l~~~g~~~~ 201 (230)
T 3evz_A 164 EAFDHLNPGGKVALYLPDK-----EKLLNVIKERGIKLGYSVK 201 (230)
T ss_dssp HHGGGEEEEEEEEEEEESC-----HHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhCCCeEEEEEeccc-----HhHHHHHHHHHHHcCCceE
Confidence 9999999999999976521 1223445555566566443
|
| >3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.07 E-value=2.6e-06 Score=84.06 Aligned_cols=135 Identities=14% Similarity=0.125 Sum_probs=83.8
Q ss_pred eeEeecCCCccchhhhcc--CCCeeEEEecCCCCC-CchhHhhhc----ccc---c-cccccCCCCCCCCCccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALT--SDPVWVMNVVPARKS-STLSVIYDR----GLI---G-VYHDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~--~~~VwvMnvvp~~~~-ntl~vi~eR----GLi---G-~~hdwce~fstYPrtyDLiHa~~ 443 (527)
.+|||+|||.|.++.+|. ..+-. +|+-+|-. ..+..+-++ |+- - +..|..+ ++ ++.+||+|.+..
T Consensus 120 ~~vLDiGcG~G~~~~~la~~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~ 195 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDYSACPGV--QLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWK-LD-TREGYDLLTSNG 195 (305)
T ss_dssp CEEEETTCTTCHHHHTSCCTTCTTC--EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGG-CC-CCSCEEEEECCS
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCC--eEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhc-CC-ccCCeEEEEECC
Confidence 479999999999999983 33221 22222322 333333332 331 1 1223222 22 458999999988
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC---------H------------------------------H
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS---------P------------------------------E 484 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~---------~------------------------------~ 484 (527)
++..+. +.-....+|-|+-|+|+|||.+++.+- . .
T Consensus 196 ~~~~~~------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (305)
T 3ocj_A 196 LNIYEP------DDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALR 269 (305)
T ss_dssp SGGGCC------CHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCC
T ss_pred hhhhcC------CHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccC
Confidence 887653 211223478999999999999999861 1 1
Q ss_pred HHHHHHHHHhcCCceeEEecCCCCCCCCceEEEEEec
Q 009719 485 VIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 485 ~~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
..++++++++.--++....... ....-..++++|+
T Consensus 270 ~~~~~~~~l~~aGF~~v~~~~~--~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 270 THAQTRAQLEEAGFTDLRFEDD--RARLFPTVIARKP 304 (305)
T ss_dssp CHHHHHHHHHHTTCEEEEEECC--TTSSSCEEEEECC
T ss_pred CHHHHHHHHHHCCCEEEEEEcc--cCceeeEEEEecC
Confidence 3667888888888887655432 2234467888885
|
| >1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=98.06 E-value=5.7e-06 Score=77.16 Aligned_cols=115 Identities=17% Similarity=0.193 Sum_probs=70.0
Q ss_pred hhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc-ccc-c
Q 009719 350 DSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL-IGV-Y 422 (527)
Q Consensus 350 d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL-iG~-~ 422 (527)
..+.|.+.+..+.... .. .-.+|||+|||.|.++..|.+...- |+-+|.. ..+..+-++ |+ +-. .
T Consensus 19 ~~~~~~~~~~~~l~~~---~~--~~~~vLdiG~G~G~~~~~l~~~~~~---~~~~D~s~~~~~~a~~~~~~~~~~~~~~~ 90 (246)
T 1y8c_A 19 DYKKWSDFIIEKCVEN---NL--VFDDYLDLACGTGNLTENLCPKFKN---TWAVDLSQEMLSEAENKFRSQGLKPRLAC 90 (246)
T ss_dssp CHHHHHHHHHHHHHTT---TC--CTTEEEEETCTTSTTHHHHGGGSSE---EEEECSCHHHHHHHHHHHHHTTCCCEEEC
T ss_pred cHHHHHHHHHHHHHHh---CC--CCCeEEEeCCCCCHHHHHHHHCCCc---EEEEECCHHHHHHHHHHHhhcCCCeEEEe
Confidence 3345555555544321 11 2358999999999999999877542 3333433 444444333 22 111 1
Q ss_pred cccCCCCCCCCCccchhhhcC-ccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 423 HDWCEPFSTYPRTYDLIHVSG-IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 423 hdwce~fstYPrtyDLiHa~~-~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
.|.. .++ ++.+||+|.+.. +|.... +.=....+|-++-|+|+|||.+++.
T Consensus 91 ~d~~-~~~-~~~~fD~v~~~~~~l~~~~------~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 91 QDIS-NLN-INRKFDLITCCLDSTNYII------DSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp CCGG-GCC-CSCCEEEEEECTTGGGGCC------SHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cccc-cCC-ccCCceEEEEcCccccccC------CHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 1221 122 358999999987 777552 1123567899999999999999983
|
| >3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=4e-06 Score=87.16 Aligned_cols=120 Identities=10% Similarity=0.049 Sum_probs=81.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCccccc----ccChH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPF----TAYNA 214 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw----~d~~~ 214 (527)
.|.++..|..++.. +...|.++.+++.|+++ ++.+.+..+|...+++++++||+|+|+-.+++- .+...
T Consensus 244 ~G~~~~~la~~g~~---V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~ 320 (381)
T 3dmg_A 244 YGALTLPLARMGAE---VVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVGGAVILDVAQ 320 (381)
T ss_dssp TSTTHHHHHHTTCE---EEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTTCSSCCHHHH
T ss_pred CCHHHHHHHHcCCE---EEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhcccccHHHHH
Confidence 55666666677653 33447888999888764 556778889999998888999999999877541 22233
Q ss_pred HHHHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeeeecceEEEeCC
Q 009719 215 TYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKKP 273 (527)
Q Consensus 215 ~aL~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~~~~v~iwrKp 273 (527)
.++.++.|+|||||+++++..+.. .+.. .+++... ..+.+ +.....|++..
T Consensus 321 ~~l~~~~~~LkpGG~l~iv~n~~l---~~~~--~l~~~f~--~v~~l-~~~gF~Vl~a~ 371 (381)
T 3dmg_A 321 AFVNVAAARLRPGGVFFLVSNPFL---KYEP--LLEEKFG--AFQTL-KVAEYKVLFAE 371 (381)
T ss_dssp HHHHHHHHHEEEEEEEEEEECTTS---CHHH--HHHHHHS--CCEEE-EESSSEEEEEE
T ss_pred HHHHHHHHhcCcCcEEEEEEcCCC---ChHH--HHHHhhc--cEEEE-eCCCEEEEEEE
Confidence 499999999999999999876422 2222 2333322 24455 55666666543
|
| >4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=4.5e-07 Score=93.37 Aligned_cols=145 Identities=13% Similarity=0.082 Sum_probs=102.3
Q ss_pred ccchhhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccccccccc
Q 009719 346 VFEADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGLIGVYHD 424 (527)
Q Consensus 346 ~f~~d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGLiG~~hd 424 (527)
.|...+..|......+.+.+...+....=.+|||+|||.|.++..|.+... +|+-.|-. +.+..+-++|+-.....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~~ 156 (416)
T 4e2x_A 80 YHSSGSSVMREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTDF 156 (416)
T ss_dssp CCGGGCHHHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECSC
T ss_pred CcCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCCCcceee
Confidence 355667789998888877666555544456899999999999999988765 44444544 77788888875332211
Q ss_pred cCC----CCCCC-CCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH----------------
Q 009719 425 WCE----PFSTY-PRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP---------------- 483 (527)
Q Consensus 425 wce----~fstY-PrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~---------------- 483 (527)
+.. .++ + +.+||+|.+.++|.++. +...+|-|+-|+|+|||.+++....
T Consensus 157 ~~~~~~~~l~-~~~~~fD~I~~~~vl~h~~---------d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 226 (416)
T 4e2x_A 157 FEKATADDVR-RTEGPANVIYAANTLCHIP---------YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDE 226 (416)
T ss_dssp CSHHHHHHHH-HHHCCEEEEEEESCGGGCT---------THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTT
T ss_pred echhhHhhcc-cCCCCEEEEEECChHHhcC---------CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhh
Confidence 111 111 2 38999999999998763 3578999999999999999997421
Q ss_pred ----HHHHHHHHHHhcCCceeEEe
Q 009719 484 ----EVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 484 ----~~~~~i~~i~~~l~W~~~~~ 503 (527)
-..+.+++++++--+++...
T Consensus 227 ~~~~~s~~~l~~ll~~aGf~~~~~ 250 (416)
T 4e2x_A 227 HFFLFSATSVQGMAQRCGFELVDV 250 (416)
T ss_dssp CCEECCHHHHHHHHHHTTEEEEEE
T ss_pred hhhcCCHHHHHHHHHHcCCEEEEE
Confidence 02356788888877776543
|
| >3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei} | Back alignment and structure |
|---|
Probab=98.04 E-value=1.5e-06 Score=83.44 Aligned_cols=66 Identities=15% Similarity=0.069 Sum_probs=50.5
Q ss_pred HHHHHHHc----CC--CcEEeecc---ccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 169 QIQFALER----GI--PAFVAMLG---TRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 169 qvq~A~eR----g~--pa~~~v~d---ae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|++.|+++ ++ .+.+..+| ...+||++++||+|+|..+++|+.+... ++..+.++++|||+++++..
T Consensus 86 ~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 86 TLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASANA-LALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp CHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHH-HHHHHHHHTTTCSEEEEEEE
T ss_pred HHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCEEEEEEccchhhCCCHHH-HHHHHHHHhCCCCEEEEEEe
Confidence 56666544 33 25566677 6788999999999999999999877655 66666777777999999775
|
| >2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=1.1e-06 Score=86.90 Aligned_cols=98 Identities=11% Similarity=0.066 Sum_probs=64.9
Q ss_pred eeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhc----cccccccccCCCCCCCCCccchhhhcCcccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDR----GLIGVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eR----GLiG~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
-.+|||+|||.|.++..|.+. +. +|+-+|-. ..+..+-++ |+-....-.+..+..+|.+||+|.+..+|..
T Consensus 91 ~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~l~~ 167 (318)
T 2fk8_A 91 GMTLLDIGCGWGTTMRRAVERFDV---NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAFEH 167 (318)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEESCGGG
T ss_pred cCEEEEEcccchHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEEEeChHHh
Confidence 357999999999999888755 43 23333332 555555444 4422111112222334689999999988875
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.. .-+...+|-|+-|+|+|||.+++.+
T Consensus 168 ~~-------~~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 168 FG-------HENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp TC-------GGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred cC-------HHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 52 1235678999999999999999975
|
| >1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42 | Back alignment and structure |
|---|
Probab=98.03 E-value=4.8e-07 Score=85.48 Aligned_cols=125 Identities=14% Similarity=0.116 Sum_probs=78.9
Q ss_pred cCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc----ccc-cccccCCCCCCCCCccchhhhc
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG----LIG-VYHDWCEPFSTYPRTYDLIHVS 442 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG----LiG-~~hdwce~fstYPrtyDLiHa~ 442 (527)
+....-.+|||+|||.|.++..|...... +|.-+|.. ..+..+-++- -+- +..|..+ ++.-+.+||+|.+.
T Consensus 89 l~~~~~~~vLDiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~ 165 (254)
T 1xtp_A 89 LPGHGTSRALDCGAGIGRITKNLLTKLYA--TTDLLEPVKHMLEEAKRELAGMPVGKFILASMET-ATLPPNTYDLIVIQ 165 (254)
T ss_dssp STTCCCSEEEEETCTTTHHHHHTHHHHCS--EEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGG-CCCCSSCEEEEEEE
T ss_pred hcccCCCEEEEECCCcCHHHHHHHHhhcC--EEEEEeCCHHHHHHHHHHhccCCceEEEEccHHH-CCCCCCCeEEEEEc
Confidence 33344568999999999999988655311 22222322 4445444442 111 2223322 33223799999999
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH----------------HHHHHHHHHHhcCCceeEEe
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP----------------EVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~----------------~~~~~i~~i~~~l~W~~~~~ 503 (527)
.++..+. .-....+|-|+-|+|+|||++++.+.. ...+.++++++..-++....
T Consensus 166 ~~l~~~~-------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 235 (254)
T 1xtp_A 166 WTAIYLT-------DADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKE 235 (254)
T ss_dssp SCGGGSC-------HHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEE
T ss_pred chhhhCC-------HHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEe
Confidence 8887652 113467899999999999999998620 12467788887777876544
|
| >3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=6.1e-06 Score=82.41 Aligned_cols=69 Identities=20% Similarity=0.193 Sum_probs=55.4
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|. +.+++.|+++ ++. +.+..+|.. .|+|. +||+|+|..++|||.++. ..+|+++.|+|||||+|++..+
T Consensus 200 D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 200 DL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp EC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEee
Confidence 76 7788888754 442 567777775 56776 899999999999998763 3599999999999999999775
|
| >2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=98.03 E-value=3e-06 Score=83.98 Aligned_cols=73 Identities=15% Similarity=0.154 Sum_probs=58.5
Q ss_pred ccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEe
Q 009719 161 APRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 161 Ap~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS 233 (527)
...|.+ .+++.|+++ ++. +.+..+|...+|++++ ||+|+|+.+++||.+.. ..+|+++.|+|||||++++.
T Consensus 193 ~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 270 (335)
T 2r3s_A 193 FGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVF 270 (335)
T ss_dssp EEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 333777 888888765 443 5677788888888876 99999999999996553 35999999999999999998
Q ss_pred cC
Q 009719 234 GP 235 (527)
Q Consensus 234 ~p 235 (527)
.+
T Consensus 271 e~ 272 (335)
T 2r3s_A 271 DF 272 (335)
T ss_dssp EC
T ss_pred ee
Confidence 75
|
| >3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=1.4e-06 Score=80.66 Aligned_cols=106 Identities=21% Similarity=0.294 Sum_probs=70.4
Q ss_pred hhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc----ccccc-cccCCCCCCCCCccch
Q 009719 365 LNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG----LIGVY-HDWCEPFSTYPRTYDL 438 (527)
Q Consensus 365 l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG----LiG~~-hdwce~fstYPrtyDL 438 (527)
+...+....-.+|||+|||.|.++.+|.+.. -+|+-+|-. ..+..+-++. -+-.+ .|.. .++ .+.+||+
T Consensus 43 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~-~~~-~~~~fD~ 117 (216)
T 3ofk_A 43 LRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDIL-QFS-TAELFDL 117 (216)
T ss_dssp HHHHTTTSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTT-TCC-CSCCEEE
T ss_pred HHHHcccCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchh-hCC-CCCCccE
Confidence 3333555667899999999999999998774 245555543 4455554442 12222 2222 222 2489999
Q ss_pred hhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 439 IHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 439 iHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
|.+..++.... +.-.+..+|-|+-|+|+|||.+++.+
T Consensus 118 v~~~~~l~~~~------~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 118 IVVAEVLYYLE------DMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp EEEESCGGGSS------SHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEccHHHhCC------CHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 99998887654 22223467999999999999999964
|
| >3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.02 E-value=2.8e-06 Score=77.75 Aligned_cols=94 Identities=18% Similarity=0.197 Sum_probs=63.5
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc---cc-cccccCCCCCCCCCccchhhhcCccc
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL---IG-VYHDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL---iG-~~hdwce~fstYPrtyDLiHa~~~fs 446 (527)
+|||+|||.|.++..|.+.+- .+|+-.|-. ..+..+-++ |+ +- +..|.. .++.-+.+||+|.+..++.
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~D~v~~~~~l~ 122 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSD--FSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVH-NIPIEDNYADLIVSRGSVF 122 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSE--EEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTT-BCSSCTTCEEEEEEESCGG
T ss_pred EEEEECCCCCHHHHHHHHcCC--CeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHH-HCCCCcccccEEEECchHh
Confidence 899999999999999977632 233333432 445544444 43 11 222322 2232238999999998887
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.+. +...+|-|+-|+|+|||.+++.+
T Consensus 123 ~~~---------~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 123 FWE---------DVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp GCS---------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcc---------CHHHHHHHHHHhCCCCCEEEEEe
Confidence 653 24679999999999999999974
|
| >3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.02 E-value=3.2e-07 Score=86.94 Aligned_cols=95 Identities=14% Similarity=0.201 Sum_probs=65.1
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccccccc-cccCCCCCCCC-CccchhhhcCccccccCC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGLIGVY-HDWCEPFSTYP-RTYDLIHVSGIESLIKNP 451 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGLiG~~-hdwce~fstYP-rtyDLiHa~~~fs~~~~~ 451 (527)
.+|||+|||.|.|+.+|.+...-| +-+|-. ..+..+-++ +-.. .|-.+....+| .+||+|.+..++....
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~~v---~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~-- 115 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEEGIES---IGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLD-- 115 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHHTCCE---EEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSC--
T ss_pred CeEEEEeCCCCHHHHHHHhCCCcE---EEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEECCchhhCC--
Confidence 589999999999999987765433 333433 566666665 2221 12111111234 8999999998888653
Q ss_pred CCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 452 GSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 452 ~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.-.+..+|-|+-|+|+|||++++..
T Consensus 116 -----~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 116 -----PERLFELLSLCYSKMKYSSYIVIES 140 (240)
T ss_dssp -----GGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred -----cHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 2235689999999999999999974
|
| >3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.00 E-value=3.4e-06 Score=78.76 Aligned_cols=117 Identities=15% Similarity=0.125 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc--ccccccccCCC
Q 009719 352 RRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG--LIGVYHDWCEP 428 (527)
Q Consensus 352 ~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG--LiG~~hdwce~ 428 (527)
..|...++.+.+.+...+. .-.+|||+|||.|.++..|.+..- +|.-.|.. ..+..+-++. +--+..|.. .
T Consensus 21 ~~~~~~~~~~~~~l~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~-~ 94 (239)
T 3bxo_A 21 KDYAAEASDIADLVRSRTP--EASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMR-D 94 (239)
T ss_dssp CCHHHHHHHHHHHHHHHCT--TCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTT-T
T ss_pred hhHHHHHHHHHHHHHHhcC--CCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHH-H
Confidence 3455555555555554342 236899999999999998866532 33333433 4455554442 111122322 2
Q ss_pred CCCCCCccchhhhcC-ccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 429 FSTYPRTYDLIHVSG-IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 429 fstYPrtyDLiHa~~-~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
++ ++.+||+|.|.. ++.... +.-....+|-++-|+|+|||.+++.+
T Consensus 95 ~~-~~~~~D~v~~~~~~~~~~~------~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 95 FR-LGRKFSAVVSMFSSVGYLK------TTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CC-CSSCEEEEEECTTGGGGCC------SHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred cc-cCCCCcEEEEcCchHhhcC------CHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 23 268999999643 555432 11234678999999999999999973
|
| >3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.00 E-value=4.9e-06 Score=76.82 Aligned_cols=84 Identities=13% Similarity=-0.031 Sum_probs=62.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYL 217 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL 217 (527)
.|.++..|...+..+..+ |.++.+++.|+++ +.+ ..+..+|....+.++++||+|++..+++|+.+
T Consensus 88 ~G~~~~~la~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~------ 158 (210)
T 3lbf_A 88 SGYQTAILAHLVQHVCSV---ERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPT------ 158 (210)
T ss_dssp TSHHHHHHHHHSSEEEEE---ESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSBCSSCCT------
T ss_pred CCHHHHHHHHhCCEEEEE---ecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccchhhhhH------
Confidence 344444555554433333 7778888888765 443 56777888888888899999999998877664
Q ss_pred HHHhhcccCCcEEEEecCC
Q 009719 218 IEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~pp 236 (527)
++.|+|||||+++++.++
T Consensus 159 -~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 159 -ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp -HHHHTEEEEEEEEEEECS
T ss_pred -HHHHhcccCcEEEEEEcC
Confidence 688999999999999874
|
| >2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca} | Back alignment and structure |
|---|
Probab=98.00 E-value=5.4e-06 Score=81.87 Aligned_cols=73 Identities=12% Similarity=-0.003 Sum_probs=56.0
Q ss_pred cChHHHHHHHHHcC---CCcEEeeccccCCC-----------CCCCcccEEEecCcccccccC-hHHHHHHHhhcccCCc
Q 009719 164 DSHKAQIQFALERG---IPAFVAMLGTRRLP-----------FPAFSFDIVHCSRCLIPFTAY-NATYLIEVDRLLRPGG 228 (527)
Q Consensus 164 D~seaqvq~A~eRg---~pa~~~v~dae~LP-----------FpD~SFDlV~cs~~l~hw~d~-~~~aL~Ei~RVLRPGG 228 (527)
|.++.|++.|+++. ..+.+..+|...++ |+..+||+|++..+++|+++. ...+|+|+.|+|||||
T Consensus 111 D~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG 190 (274)
T 2qe6_A 111 DIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGS 190 (274)
T ss_dssp ESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTC
T ss_pred ECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCc
Confidence 77889999998763 23566777764321 333589999999999888774 3459999999999999
Q ss_pred EEEEecCC
Q 009719 229 YLVISGPP 236 (527)
Q Consensus 229 ~lviS~pp 236 (527)
+|+++...
T Consensus 191 ~l~i~~~~ 198 (274)
T 2qe6_A 191 YLFMTSLV 198 (274)
T ss_dssp EEEEEEEB
T ss_pred EEEEEEec
Confidence 99998763
|
| >3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=3.5e-06 Score=76.25 Aligned_cols=146 Identities=14% Similarity=0.059 Sum_probs=79.4
Q ss_pred cCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc--cccccccCCCCCCC-CCccchhh
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL--IGVYHDWCEPFSTY-PRTYDLIH 440 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL--iG~~hdwce~fstY-PrtyDLiH 440 (527)
+..+ ..|||+|||.|.++..|.+...-|. -.|-. ..+..+-+ .|+ +-+.++-.+.+..+ +.+||+|.
T Consensus 20 ~~~~--~~vLDiGcG~G~~~~~la~~~~~v~---~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~ 94 (185)
T 3mti_A 20 LDDE--SIVVDATMGNGNDTAFLAGLSKKVY---AFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAI 94 (185)
T ss_dssp CCTT--CEEEESCCTTSHHHHHHHTTSSEEE---EEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEE
T ss_pred CCCC--CEEEEEcCCCCHHHHHHHHhCCEEE---EEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEE
Confidence 4444 4799999999999999987743333 33322 33443333 344 33333333343323 47899996
Q ss_pred hc-CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC------CHHHHHHHHHHHhcCC---ceeEEecCCCCCC
Q 009719 441 VS-GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD------SPEVIDKVSRIANTVR---WTAAVHDKEPGSN 510 (527)
Q Consensus 441 a~-~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird------~~~~~~~i~~i~~~l~---W~~~~~~~e~~~~ 510 (527)
++ +.+..-. .......-.....|-|+-|+|+|||.+++.. ..+..+.+.+.+..+. |.+.....-+...
T Consensus 95 ~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 173 (185)
T 3mti_A 95 FNLGYLPSAD-KSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLNQIN 173 (185)
T ss_dssp EEEC------------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESSCSS
T ss_pred EeCCCCCCcc-hhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhccCC
Confidence 65 2211100 0000000011356788999999999998863 1234455666666555 7766554433334
Q ss_pred CCceEEEEEe
Q 009719 511 GREKILVATK 520 (527)
Q Consensus 511 ~~ekiLi~~K 520 (527)
.+..+++..|
T Consensus 174 ~~~~~~~i~~ 183 (185)
T 3mti_A 174 TPPFLVMLEK 183 (185)
T ss_dssp CCCEEEEEEE
T ss_pred CCCeEEEEEe
Confidence 4556666666
|
| >3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=97.99 E-value=3.4e-06 Score=77.15 Aligned_cols=143 Identities=12% Similarity=0.024 Sum_probs=88.0
Q ss_pred cCCCCeeeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhhc----cc---cccc-cccCCCCC-CCCCcc
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYDR----GL---IGVY-HDWCEPFS-TYPRTY 436 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~eR----GL---iG~~-hdwce~fs-tYPrty 436 (527)
+..+ .+|||+|||.|.++.+|.+. +-- +|+-.|.. ..+..+-++ |+ +-+. .|. +.+. ..+.+|
T Consensus 20 ~~~~--~~vLDlGcG~G~~~~~l~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~f 94 (197)
T 3eey_A 20 VKEG--DTVVDATCGNGNDTAFLASLVGENG--RVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGH-QNMDKYIDCPV 94 (197)
T ss_dssp CCTT--CEEEESCCTTSHHHHHHHHHHCTTC--EEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCG-GGGGGTCCSCE
T ss_pred CCCC--CEEEEcCCCCCHHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH-HHHhhhccCCc
Confidence 4444 38999999999999888654 211 33334433 444444333 33 2222 222 2233 234899
Q ss_pred chhhhcCccccccCCCCCCCCC------cccccceeecccccCCcEEEEeC------CHHHHHHHHHHHhcCC---ceeE
Q 009719 437 DLIHVSGIESLIKNPGSNKNSC------SLVDLMVEMDRMLRPEGTVVVRD------SPEVIDKVSRIANTVR---WTAA 501 (527)
Q Consensus 437 DLiHa~~~fs~~~~~~~~~~rC------~~~~illEmDRILRP~G~~iird------~~~~~~~i~~i~~~l~---W~~~ 501 (527)
|+|-++..+-.. .+.. ....++-++-|+|+|||.+++.. ..+....+.+.++.+. |++.
T Consensus 95 D~v~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~ 168 (197)
T 3eey_A 95 KAVMFNLGYLPS------GDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQ 168 (197)
T ss_dssp EEEEEEESBCTT------SCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEE
T ss_pred eEEEEcCCcccC------cccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEE
Confidence 999987555111 1111 12358999999999999999874 2234556666666654 8887
Q ss_pred EecCCCCCCCCceEEEEEecc
Q 009719 502 VHDKEPGSNGREKILVATKSL 522 (527)
Q Consensus 502 ~~~~e~~~~~~ekiLi~~K~~ 522 (527)
....-+....+..++|.+|..
T Consensus 169 ~~~~~~~~~~pp~~~~~~~~~ 189 (197)
T 3eey_A 169 RTDFINQANCPPILVCIEKIS 189 (197)
T ss_dssp EEEETTCCSCCCEEEEEEECC
T ss_pred EEEeccCccCCCeEEEEEEcc
Confidence 776666666678888888864
|
| >3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
|---|
Probab=97.99 E-value=1.2e-05 Score=74.10 Aligned_cols=106 Identities=12% Similarity=0.072 Sum_probs=69.8
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLI 218 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~ 218 (527)
|.++..|...+.. .+...|.++.+++.|+++ +.. ..+..+|.. ++.+++||+|+|...++++ ..++.
T Consensus 72 G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~--~~~~~~fD~i~~~~~~~~~----~~~l~ 143 (205)
T 3grz_A 72 GILAIAAHKLGAK--SVLATDISDESMTAAEENAALNGIYDIALQKTSLL--ADVDGKFDLIVANILAEIL----LDLIP 143 (205)
T ss_dssp SHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTT--TTCCSCEEEEEEESCHHHH----HHHGG
T ss_pred CHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEecccc--ccCCCCceEEEECCcHHHH----HHHHH
Confidence 4444455554431 233337788888888765 544 566666764 4567999999998876543 34899
Q ss_pred HHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeee
Q 009719 219 EVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAV 263 (527)
Q Consensus 219 Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~ 263 (527)
++.|+|||||++++++... ...+.+.++.+...++.+..
T Consensus 144 ~~~~~L~~gG~l~~~~~~~------~~~~~~~~~~~~~Gf~~~~~ 182 (205)
T 3grz_A 144 QLDSHLNEDGQVIFSGIDY------LQLPKIEQALAENSFQIDLK 182 (205)
T ss_dssp GSGGGEEEEEEEEEEEEEG------GGHHHHHHHHHHTTEEEEEE
T ss_pred HHHHhcCCCCEEEEEecCc------ccHHHHHHHHHHcCCceEEe
Confidence 9999999999999986421 12344555666666766543
|
| >3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=6.3e-06 Score=83.73 Aligned_cols=66 Identities=8% Similarity=0.120 Sum_probs=52.2
Q ss_pred cChHHHHHHHHHc----CC-CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.+++|++.|+++ |+ .+.+.++|+..+| +++||+|++... ..+ ...++.|+.|+|||||+|++...
T Consensus 153 Dis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a~---~~d-~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 153 EIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAAL---AEP-KRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp ESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECTT---CSC-HHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECCC---ccC-HHHHHHHHHHHcCCCcEEEEEcC
Confidence 7788999999865 55 3567788888876 899999997644 233 33499999999999999999764
|
| >3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
|---|
Probab=97.99 E-value=9.7e-06 Score=74.69 Aligned_cols=115 Identities=16% Similarity=0.225 Sum_probs=74.5
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cccccccccCCCCCCCCCccchhhhcCcccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIK 449 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~ 449 (527)
.+|||+|||.|.++.+|.+.+.- +|+-.|.. ..+..+-++ |+-.+----...+...+.+||+|.++..+..
T Consensus 62 ~~vLDiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~~-- 137 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHKLGAK--SVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAEI-- 137 (205)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHHH--
T ss_pred CEEEEECCCCCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHHH--
Confidence 58999999999999998776531 23333332 444444433 4322111111222233589999999766543
Q ss_pred CCCCCCCCCcccccceeecccccCCcEEEEeC-CHHHHHHHHHHHhcCCceeEEe
Q 009719 450 NPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 450 ~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~i~~i~~~l~W~~~~~ 503 (527)
+..+|-++-|+|+|||.+++.+ ..+....+.++++...++....
T Consensus 138 ----------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~ 182 (205)
T 3grz_A 138 ----------LLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLK 182 (205)
T ss_dssp ----------HHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEE
T ss_pred ----------HHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEe
Confidence 3568999999999999999975 3345667777777777776543
|
| >3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=8.4e-07 Score=81.55 Aligned_cols=95 Identities=16% Similarity=0.173 Sum_probs=65.2
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcccccc---ccccCCCCCCCCCccchhhhcCccccccC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGLIGV---YHDWCEPFSTYPRTYDLIHVSGIESLIKN 450 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGLiG~---~hdwce~fstYPrtyDLiHa~~~fs~~~~ 450 (527)
.+|||+|||.|.++.+|.+... +|+-.|-. ..+..+-++|+..+ ..|..+. .-+.+||+|.+..++....
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~--~~~~~~D~v~~~~~l~~~~- 121 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGLAD---RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW--TPDRQWDAVFFAHWLAHVP- 121 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC--CCSSCEEEEEEESCGGGSC-
T ss_pred CeEEEECCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHhcCCCCeEEEecccccC--CCCCceeEEEEechhhcCC-
Confidence 4899999999999999977643 23333332 55666666663221 2222222 1248999999998887653
Q ss_pred CCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 451 PGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 451 ~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.-.+..+|-|+-|+|+|||.+++.+
T Consensus 122 ------~~~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 122 ------DDRFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp ------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------HHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 1224678999999999999999984
|
| >3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=3.6e-06 Score=80.33 Aligned_cols=71 Identities=17% Similarity=0.204 Sum_probs=54.6
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCC-C--CCCCcccEEEecCcccccccChH--------HHHHHHhhcccCC
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRL-P--FPAFSFDIVHCSRCLIPFTAYNA--------TYLIEVDRLLRPG 227 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~L-P--FpD~SFDlV~cs~~l~hw~d~~~--------~aL~Ei~RVLRPG 227 (527)
|.++.+++.|+++ ++. +.+..+|+..+ + |++++||.|++... .+|+.... .++.++.|+||||
T Consensus 65 D~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~-~p~~~~~~~~rr~~~~~~l~~~~r~LkpG 143 (218)
T 3dxy_A 65 EVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFP-DPWHKARHNKRRIVQVPFAELVKSKLQLG 143 (218)
T ss_dssp CSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEESC-CCCCSGGGGGGSSCSHHHHHHHHHHEEEE
T ss_pred EecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeCC-CCccchhhhhhhhhhHHHHHHHHHHcCCC
Confidence 6778888877654 543 56777888774 5 89999999998765 35654332 3999999999999
Q ss_pred cEEEEecC
Q 009719 228 GYLVISGP 235 (527)
Q Consensus 228 G~lviS~p 235 (527)
|+|++++.
T Consensus 144 G~l~i~td 151 (218)
T 3dxy_A 144 GVFHMATD 151 (218)
T ss_dssp EEEEEEES
T ss_pred cEEEEEeC
Confidence 99999875
|
| >4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans} | Back alignment and structure |
|---|
Probab=97.97 E-value=1.2e-06 Score=86.08 Aligned_cols=94 Identities=15% Similarity=0.069 Sum_probs=60.8
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCCCchhHhhhccccccccccCCCCCCCCCccchhhhcCccccccCCCCC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSN 454 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~ 454 (527)
.+|||+|||.|.++..|.+.--=|.-|=|. +..|..+-++.=|-..+.=-|.++.-+.+||+|.|..+| +|.
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s--~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~-h~~----- 112 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEFFERVHAVDPG--EAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAM-HWF----- 112 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTTCSEEEEEESC--HHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCC-TTC-----
T ss_pred CCEEEEcCCCCHHHHHHHHhCCEEEEEeCc--HHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeeh-hHh-----
Confidence 479999999999999998765333333222 133433333321222222224444223899999999888 453
Q ss_pred CCCCcccccceeecccccCCcEEEEe
Q 009719 455 KNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 455 ~~rC~~~~illEmDRILRP~G~~iir 480 (527)
+....+-|+-|+|||||.+++-
T Consensus 113 ----~~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 113 ----DLDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp ----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----hHHHHHHHHHHHcCCCCEEEEE
Confidence 2467899999999999999775
|
| >3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=97.97 E-value=5.2e-06 Score=75.88 Aligned_cols=92 Identities=15% Similarity=0.061 Sum_probs=63.9
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC-CcEEeeccccCCC--CCCCcccEEEecCcccccccChHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI-PAFVAMLGTRRLP--FPAFSFDIVHCSRCLIPFTAYNAT 215 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~-pa~~~v~dae~LP--FpD~SFDlV~cs~~l~hw~d~~~~ 215 (527)
+|.++..++.++.. .+...|.++.+++.|+++ ++ .+.+.++|+..++ +++++||+|+|...+++..+....
T Consensus 55 ~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~ 132 (189)
T 3p9n_A 55 SGALGLEALSRGAA--SVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDA 132 (189)
T ss_dssp TCHHHHHHHHTTCS--EEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHH
T ss_pred cCHHHHHHHHCCCC--eEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCCCcchhhHHH
Confidence 44455545555532 223337778888888764 44 3567788877764 568999999998776543233445
Q ss_pred HHHHHhh--cccCCcEEEEecCC
Q 009719 216 YLIEVDR--LLRPGGYLVISGPP 236 (527)
Q Consensus 216 aL~Ei~R--VLRPGG~lviS~pp 236 (527)
++.++.| +|||||++++..+.
T Consensus 133 ~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 133 ILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp HHHHHHHSSSCCTTCEEEEEEET
T ss_pred HHHHHHhcCccCCCeEEEEEecC
Confidence 9999999 99999999998753
|
| >3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.96 E-value=1.7e-06 Score=81.17 Aligned_cols=115 Identities=11% Similarity=0.074 Sum_probs=77.4
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccc---c-ccccccCCCCCCCCCccchhhhcCcccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGL---I-GVYHDWCEPFSTYPRTYDLIHVSGIESLIK 449 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGL---i-G~~hdwce~fstYPrtyDLiHa~~~fs~~~ 449 (527)
.+|||+|||.|.++.+|.....-| +-+|-. ..+..+-+++. + -+..|.. .++.-+.+||+|.+..++.+..
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~ 130 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRTGYKA---VGVDISEVMIQKGKERGEGPDLSFIKGDLS-SLPFENEQFEAIMAINSLEWTE 130 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEE---EEEESCHHHHHHHHTTTCBTTEEEEECBTT-BCSSCTTCEEEEEEESCTTSSS
T ss_pred CeEEEEcCCCCHHHHHHHHcCCeE---EEEECCHHHHHHHHhhcccCCceEEEcchh-cCCCCCCCccEEEEcChHhhcc
Confidence 489999999999999998775433 333333 55666666632 1 1122222 2332248999999998887653
Q ss_pred CCCCCCCCCcccccceeecccccCCcEEEEeCCH----------------------HHHHHHHHHHhcCCceeEE
Q 009719 450 NPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP----------------------EVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 450 ~~~~~~~rC~~~~illEmDRILRP~G~~iird~~----------------------~~~~~i~~i~~~l~W~~~~ 502 (527)
+...+|-|+-|+|+|||.+++.+.. -....++++++..-+++..
T Consensus 131 ---------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 196 (242)
T 3l8d_A 131 ---------EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVD 196 (242)
T ss_dssp ---------CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEE
T ss_pred ---------CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEE
Confidence 2357899999999999999997410 1134677888888887654
|
| >3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=1.1e-06 Score=85.22 Aligned_cols=102 Identities=14% Similarity=0.176 Sum_probs=66.0
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc----ccc-------cccccCCCCC---CCCCccch
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG----LIG-------VYHDWCEPFS---TYPRTYDL 438 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG----LiG-------~~hdwce~fs---tYPrtyDL 438 (527)
-.+|||+|||.|.++..|.+... +|+-+|-. ..+..+-++. .-+ ...|+.+ ++ .-+.+||+
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~fD~ 133 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT-LDKDVPAGDGFDA 133 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG-HHHHSCCTTCEEE
T ss_pred CCEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh-CccccccCCCeEE
Confidence 35899999999999999987765 55555544 5566554431 111 1112211 11 12479999
Q ss_pred hhhc-CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 439 IHVS-GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 439 iHa~-~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
|+|. .+|.++.+ ...+.-....+|-|+-|+|+|||++++..
T Consensus 134 V~~~g~~l~~~~~--~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 134 VICLGNSFAHLPD--SKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp EEECTTCGGGSCC--SSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEcChHHhhcCc--cccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 9997 67765530 00012235679999999999999999985
|
| >2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.94 E-value=3.1e-06 Score=79.02 Aligned_cols=118 Identities=12% Similarity=0.056 Sum_probs=74.2
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC---CcEEeeccccCC-CC-CCCc-ccEEEecCcccccccC
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI---PAFVAMLGTRRL-PF-PAFS-FDIVHCSRCLIPFTAY 212 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~---pa~~~v~dae~L-PF-pD~S-FDlV~cs~~l~hw~d~ 212 (527)
+|.++..++.++.. .+...|.++.+++.|+++ ++ .+.+..+|+..+ +. ++++ ||+|++...+ |..+.
T Consensus 64 tG~~~~~~~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~-~~~~~ 140 (201)
T 2ift_A 64 SGSLGFEALSRQAK--KVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPF-HFNLA 140 (201)
T ss_dssp TCHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCCS-SSCHH
T ss_pred cCHHHHHHHHccCC--EEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECCCC-CCccH
Confidence 45555555666542 233347888999988764 44 356777887664 33 4789 9999998764 43333
Q ss_pred hHHHHHHH--hhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeee----ecceEEEeCCCcc
Q 009719 213 NATYLIEV--DRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAV----DGNTVIWKKPVGE 276 (527)
Q Consensus 213 ~~~aL~Ei--~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~----~~~v~iwrKp~~~ 276 (527)
..++.++ .|+|||||+++++..+........ .|..+.+ ...+.+|++..++
T Consensus 141 -~~~l~~~~~~~~LkpgG~l~i~~~~~~~~~~~~------------~~~~~~~~~yG~~~~~~~~~~~~~ 197 (201)
T 2ift_A 141 -EQAISLLCENNWLKPNALIYVETEKDKPLITPE------------NWTLLKEKTTGIVSYRLYQNLEHH 197 (201)
T ss_dssp -HHHHHHHHHTTCEEEEEEEEEEEESSSCCCCCT------------TEEEEEEEEETTEEEEEEEECC--
T ss_pred -HHHHHHHHhcCccCCCcEEEEEECCCCCccccc------------hhHHHHHHhcCCEEEEEEecchhc
Confidence 3488999 889999999999876443211111 2554433 2347788877764
|
| >3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.93 E-value=1.6e-05 Score=74.70 Aligned_cols=117 Identities=16% Similarity=0.120 Sum_probs=77.8
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cccc----cccccCCCCCCCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLIG----VYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLiG----~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
.+|||+|||.|.++..|.....-|.. +|-. ..+..+-++ |+.. +..|..+ ++ .+.+||+|.+..+|
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~~v~g---vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~~l 142 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPERFVVG---LDISESALAKANETYGSSPKAEYFSFVKEDVFT-WR-PTELFDLIFDYVFF 142 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTEEEEE---ECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTT-CC-CSSCEEEEEEESST
T ss_pred CCEEEeCCCCCHHHHHHHhCCCeEEE---EECCHHHHHHHHHHhhccCCCcceEEEECchhc-CC-CCCCeeEEEEChhh
Confidence 48999999999999999876554433 3332 444444333 2211 1223222 11 23689999998888
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH-----------HHHHHHHHHHhcCCceeEEe
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP-----------EVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~-----------~~~~~i~~i~~~l~W~~~~~ 503 (527)
..+. .-....+|-|+-|+|+|||++++.+-. -..+.++++++..-|+....
T Consensus 143 ~~~~-------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 143 CAIE-------PEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSV 204 (235)
T ss_dssp TTSC-------GGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEE
T ss_pred hcCC-------HHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEE
Confidence 7552 234567899999999999999985310 13577888888888887644
|
| >2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.93 E-value=1.9e-05 Score=74.84 Aligned_cols=66 Identities=14% Similarity=0.111 Sum_probs=53.6
Q ss_pred cChHHHHHHHHHc-----CC-CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER-----GI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR-----g~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++.+++.|+++ |. ...+..+|...+|+++++||+|++ ++++... +|.++.|+|||||++++..+
T Consensus 128 D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~-----~~~~~~~-~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 128 EARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVAL-----DLMEPWK-VLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp ESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEE-----ESSCGGG-GHHHHHHHEEEEEEEEEEES
T ss_pred eCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEE-----CCcCHHH-HHHHHHHhCCCCCEEEEEeC
Confidence 6678888888765 53 356777888888999999999997 3444444 99999999999999999987
|
| >2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.93 E-value=5.2e-06 Score=82.65 Aligned_cols=54 Identities=15% Similarity=0.036 Sum_probs=45.4
Q ss_pred cEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 180 AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 180 a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.+..+|... |++ ++||+|+|..+++||.+.. ..+|+++.|+|||||++++...
T Consensus 219 v~~~~~d~~~-~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 219 VSLVGGDMLQ-EVP-SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp EEEEESCTTT-CCC-SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred EEEecCCCCC-CCC-CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 5667777766 676 7899999999999997765 2499999999999999999865
|
| >2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 | Back alignment and structure |
|---|
Probab=97.93 E-value=2e-06 Score=83.80 Aligned_cols=95 Identities=22% Similarity=0.297 Sum_probs=64.2
Q ss_pred eeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhh----ccc---ccc-ccccCCCCCCCCCccchhhhcC
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD----RGL---IGV-YHDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e----RGL---iG~-~hdwce~fstYPrtyDLiHa~~ 443 (527)
-.+|||+|||.|.++..|.+. +. +|+-+|-. ..+..+-+ .|+ +-+ ..|.. .++.-+.+||+|.+..
T Consensus 83 ~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 83 QAKGLDLGAGYGGAARFLVRKFGV---SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL-EIPCEDNSYDFIWSQD 158 (297)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT-SCSSCTTCEEEEEEES
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcc-cCCCCCCCEeEEEecc
Confidence 458999999999999988765 43 33333333 44444433 343 211 22322 2231137999999998
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
++.++. + ...+|-|+-|+|+|||.+++.+
T Consensus 159 ~l~~~~------~---~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 159 AFLHSP------D---KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp CGGGCS------C---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhcC------C---HHHHHHHHHHHcCCCeEEEEEE
Confidence 888764 2 5789999999999999999985
|
| >3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=97.93 E-value=5.6e-05 Score=69.66 Aligned_cols=103 Identities=12% Similarity=-0.065 Sum_probs=67.3
Q ss_pred hccccccccCC--eeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 144 ASFGGSMLSEN--ILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 144 gsfga~Ll~r~--V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
|.++..|..++ ..+. ..|.++.+++.|+++ +++ ..+..+|.........+||+|++...+. ....+
T Consensus 52 G~~~~~la~~~~~~~v~---~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~----~~~~~ 124 (204)
T 3e05_A 52 ASVSIEASNLMPNGRIF---ALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGG----MLEEI 124 (204)
T ss_dssp CHHHHHHHHHCTTSEEE---EEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCCTT----CHHHH
T ss_pred CHHHHHHHHHCCCCEEE---EEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCCCc----CHHHH
Confidence 44444555544 3222 336678888888764 443 5566777755444457899999987763 33349
Q ss_pred HHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceE
Q 009719 217 LIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYE 259 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~ 259 (527)
+.++.|+|||||+++++.+. ....+.+.+..+...|+
T Consensus 125 l~~~~~~LkpgG~l~~~~~~------~~~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 125 IDAVDRRLKSEGVIVLNAVT------LDTLTKAVEFLEDHGYM 161 (204)
T ss_dssp HHHHHHHCCTTCEEEEEECB------HHHHHHHHHHHHHTTCE
T ss_pred HHHHHHhcCCCeEEEEEecc------cccHHHHHHHHHHCCCc
Confidence 99999999999999998762 12344455555666663
|
| >1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=7.5e-06 Score=82.65 Aligned_cols=69 Identities=28% Similarity=0.335 Sum_probs=53.8
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|. +.+++.|+++ ++. +.+..+|... ++|.+ ||+|+|+.+++||.+.. ..+|+++.|+|||||++++...
T Consensus 213 D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~-~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 213 EL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPVT-ADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSCC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCCC-CCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 66 7788888764 443 5667777644 45543 99999999999998765 2499999999999999999765
|
| >3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=97.92 E-value=6.4e-06 Score=73.39 Aligned_cols=127 Identities=13% Similarity=0.080 Sum_probs=83.0
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc--cccccccccCCCCCCCCCccchhhhcCccccccC
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR--GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKN 450 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR--GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~ 450 (527)
-.+|||+|||.|.++.+|.+..- +|.-.|-. ..+..+-++ .+--...| .+| -..+||+|.+..++....
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~v~~~~~d--~~~--~~~~~D~v~~~~~l~~~~- 89 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFAT---KLYCIDINVIALKEVKEKFDSVITLSDP--KEI--PDNSVDFILFANSFHDMD- 89 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTEE---EEEEECSCHHHHHHHHHHCTTSEEESSG--GGS--CTTCEEEEEEESCSTTCS-
T ss_pred CCeEEEECCCCCHHHHHHHhhcC---eEEEEeCCHHHHHHHHHhCCCcEEEeCC--CCC--CCCceEEEEEccchhccc-
Confidence 46899999999999999987752 55555544 556666555 12112223 222 237999999998887553
Q ss_pred CCCCCCCCcccccceeecccccCCcEEEEeCCH-------------HHHHHHHHHHhcCCceeEEecCCCCCCCCceEEE
Q 009719 451 PGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP-------------EVIDKVSRIANTVRWTAAVHDKEPGSNGREKILV 517 (527)
Q Consensus 451 ~~~~~~rC~~~~illEmDRILRP~G~~iird~~-------------~~~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiLi 517 (527)
+...+|-|+-|+|+|||.+++.+-. -..++++++++ .|+......- + ...-.++
T Consensus 90 --------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~-~--~~~~~l~ 156 (170)
T 3i9f_A 90 --------DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNP-T--PYHFGLV 156 (170)
T ss_dssp --------CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECS-S--TTEEEEE
T ss_pred --------CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCC-C--CceEEEE
Confidence 3468899999999999999998410 02456667666 6665433211 1 2345777
Q ss_pred EEec
Q 009719 518 ATKS 521 (527)
Q Consensus 518 ~~K~ 521 (527)
+.|+
T Consensus 157 ~~~~ 160 (170)
T 3i9f_A 157 LKRK 160 (170)
T ss_dssp EEEC
T ss_pred EecC
Confidence 7764
|
| >3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian} | Back alignment and structure |
|---|
Probab=97.91 E-value=1.5e-05 Score=73.69 Aligned_cols=132 Identities=14% Similarity=0.133 Sum_probs=83.6
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc---cccccccccCCCCCCCCCccchhhhcCcccccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR---GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIK 449 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR---GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~ 449 (527)
-.+|||+|||.|.++..|.+...- |+-+|.. ..+..+-++ ++-=+..|..+ ++ ++.+||+|.+..++....
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~l~~~~ 120 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLAGRT---VYGIEPSREMRMIAKEKLPKEFSITEGDFLS-FE-VPTSIDTIVSTYAFHHLT 120 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHTTCE---EEEECSCHHHHHHHHHHSCTTCCEESCCSSS-CC-CCSCCSEEEEESCGGGSC
T ss_pred CCeEEEeCCCCCHHHHHHHhCCCe---EEEEeCCHHHHHHHHHhCCCceEEEeCChhh-cC-CCCCeEEEEECcchhcCC
Confidence 458999999999999999877543 3333433 444544444 22112222222 22 338999999998887654
Q ss_pred CCCCCCCCCcccccceeecccccCCcEEEEeCC----HH---------------------------HHHHHHHHHhcCCc
Q 009719 450 NPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS----PE---------------------------VIDKVSRIANTVRW 498 (527)
Q Consensus 450 ~~~~~~~rC~~~~illEmDRILRP~G~~iird~----~~---------------------------~~~~i~~i~~~l~W 498 (527)
+ =....+|-|+-|+|+|||.+++.+. .. ..+.++++++.--+
T Consensus 121 ------~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 193 (220)
T 3hnr_A 121 ------D-DEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGF 193 (220)
T ss_dssp ------H-HHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTE
T ss_pred ------h-HHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCC
Confidence 1 0112389999999999999999851 11 12567788888888
Q ss_pred eeEEecCCCCCCCCceEEEEEec
Q 009719 499 TAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 499 ~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
++...... +-.=++.++|+
T Consensus 194 ~v~~~~~~----~~~w~~~~~~~ 212 (220)
T 3hnr_A 194 HVTFTRLN----HFVWVMEATKQ 212 (220)
T ss_dssp EEEEEECS----SSEEEEEEEEC
T ss_pred EEEEeecc----ceEEEEeehhh
Confidence 77665432 23346666664
|
| >3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=1.3e-05 Score=81.93 Aligned_cols=69 Identities=13% Similarity=0.132 Sum_probs=55.5
Q ss_pred cChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccChH-HHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA-TYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~-~aL~Ei~RVLRPGG~lviS~p 235 (527)
|. +.+++.|+++ ++ .+.+..+|.. .|+|+ .||+|+|..+++||.+... .+|+++.|+|||||+|++...
T Consensus 233 D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~ 308 (369)
T 3gwz_A 233 ER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDN 308 (369)
T ss_dssp EC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred cC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 66 6788877754 43 2567777776 67887 8999999999999987652 599999999999999999764
|
| >3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.91 E-value=9.1e-06 Score=72.75 Aligned_cols=136 Identities=15% Similarity=0.071 Sum_probs=80.9
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc--ccccccccCCCCCCCCCccchhhhc-CccccccC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG--LIGVYHDWCEPFSTYPRTYDLIHVS-GIESLIKN 450 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG--LiG~~hdwce~fstYPrtyDLiHa~-~~fs~~~~ 450 (527)
.+|||+|||.|.++..|.....- |+-.+.. ..+..+-++. +--+..|..+ ++.-+.+||+|.+. .++....
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~~---v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~-~~~~~~~~D~i~~~~~~~~~~~- 122 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQGHD---VLGTDLDPILIDYAKQDFPEARWVVGDLSV-DQISETDFDLIVSAGNVMGFLA- 122 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHTTCE---EEEEESCHHHHHHHHHHCTTSEEEECCTTT-SCCCCCCEEEEEECCCCGGGSC-
T ss_pred CeEEEECCCCCHHHHHHHHCCCc---EEEEcCCHHHHHHHHHhCCCCcEEEccccc-CCCCCCceeEEEECCcHHhhcC-
Confidence 48999999999999999776543 3333332 3344333331 1111223222 22113789999997 5555431
Q ss_pred CCCCCCCCcccccceeecccccCCcEEEEeCCH---HHHHHHHHHHhcCCceeEEecCC--CC---CCCCceEEEEEec
Q 009719 451 PGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP---EVIDKVSRIANTVRWTAAVHDKE--PG---SNGREKILVATKS 521 (527)
Q Consensus 451 ~~~~~~rC~~~~illEmDRILRP~G~~iird~~---~~~~~i~~i~~~l~W~~~~~~~e--~~---~~~~ekiLi~~K~ 521 (527)
.=....+|-++-|+|+|||.+++.... ....++.++++...+++...... .. ....--+++++|+
T Consensus 123 ------~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 123 ------EDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFESWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp ------HHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTCSEEEEEEEEC
T ss_pred ------hHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecccccCcCCCCCcEEEEEEecC
Confidence 112367889999999999999996432 23567777777777776544211 11 1223446777774
|
| >3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=97.90 E-value=9.2e-06 Score=82.11 Aligned_cols=86 Identities=19% Similarity=0.194 Sum_probs=56.5
Q ss_pred hhccccccccCCe-eEEeeccCcChHHHHHHHHHcCCCcEE-eeccccCCC---CCCCcccEEEecCcccccccChHHHH
Q 009719 143 VASFGGSMLSENI-LTLSFAPRDSHKAQIQFALERGIPAFV-AMLGTRRLP---FPAFSFDIVHCSRCLIPFTAYNATYL 217 (527)
Q Consensus 143 vgsfga~Ll~r~V-~~msiAp~D~seaqvq~A~eRg~pa~~-~v~dae~LP---FpD~SFDlV~cs~~l~hw~d~~~~aL 217 (527)
+|.|+..|+.++. .+..+ |.++.|++.++++...+.. ...+...++ ++..+||+|+|..++++. . .+|
T Consensus 96 TG~~t~~L~~~ga~~V~aV---Dvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~sl---~-~vL 168 (291)
T 3hp7_A 96 TGGFTDVMLQNGAKLVYAV---DVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFISL---N-LIL 168 (291)
T ss_dssp TSHHHHHHHHTTCSEEEEE---CSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSCG---G-GTH
T ss_pred ccHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHhhH---H-HHH
Confidence 6777777777764 23333 6666777776654322221 122333333 345679999999887654 3 499
Q ss_pred HHHhhcccCCcEEEEecC
Q 009719 218 IEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~p 235 (527)
.|+.|+|||||+|++...
T Consensus 169 ~e~~rvLkpGG~lv~lvk 186 (291)
T 3hp7_A 169 PALAKILVDGGQVVALVK 186 (291)
T ss_dssp HHHHHHSCTTCEEEEEEC
T ss_pred HHHHHHcCcCCEEEEEEC
Confidence 999999999999999744
|
| >3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=97.90 E-value=2.2e-05 Score=71.72 Aligned_cols=74 Identities=14% Similarity=0.125 Sum_probs=55.5
Q ss_pred cCcChHHHHHHHHHc----CC--CcEEeeccccCCC-CCCCcccEEEecCccccccc--------ChHHHHHHHhhcccC
Q 009719 162 PRDSHKAQIQFALER----GI--PAFVAMLGTRRLP-FPAFSFDIVHCSRCLIPFTA--------YNATYLIEVDRLLRP 226 (527)
Q Consensus 162 p~D~seaqvq~A~eR----g~--pa~~~v~dae~LP-FpD~SFDlV~cs~~l~hw~d--------~~~~aL~Ei~RVLRP 226 (527)
..|.++.+++.|+++ ++ .+.+..+|++.++ +.+++||+|++...+.+..+ ....++.++.|+|||
T Consensus 52 ~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~ 131 (197)
T 3eey_A 52 GFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVT 131 (197)
T ss_dssp EECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEE
T ss_pred EEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcC
Confidence 337788888888765 44 3567788888887 78899999998865522111 112499999999999
Q ss_pred CcEEEEecC
Q 009719 227 GGYLVISGP 235 (527)
Q Consensus 227 GG~lviS~p 235 (527)
||++++...
T Consensus 132 gG~l~~~~~ 140 (197)
T 3eey_A 132 GGIITVVIY 140 (197)
T ss_dssp EEEEEEEEC
T ss_pred CCEEEEEEc
Confidence 999999864
|
| >1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.89 E-value=2.1e-05 Score=76.68 Aligned_cols=84 Identities=10% Similarity=0.108 Sum_probs=61.1
Q ss_pred hhccccccccC---CeeEEeeccCcChHHHHHHHHHc-----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccCh
Q 009719 143 VASFGGSMLSE---NILTLSFAPRDSHKAQIQFALER-----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN 213 (527)
Q Consensus 143 vgsfga~Ll~r---~V~~msiAp~D~seaqvq~A~eR-----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~ 213 (527)
.|.++.+|... +..+..+ |.++.+++.|+++ |.+ +.+..+|+.. ++++++||+|++ |+++..
T Consensus 121 ~G~~~~~la~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~-----~~~~~~ 191 (275)
T 1yb2_A 121 SGNMSSYILYALNGKGTLTVV---ERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIA-----DIPDPW 191 (275)
T ss_dssp TSHHHHHHHHHHTTSSEEEEE---CSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEE-----CCSCGG
T ss_pred CCHHHHHHHHHcCCCCEEEEE---ECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEE-----cCcCHH
Confidence 34444555544 4433333 7788889888765 433 5667778766 888899999998 455554
Q ss_pred HHHHHHHhhcccCCcEEEEecCC
Q 009719 214 ATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 214 ~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
. +|.++.|+|||||+++++.+.
T Consensus 192 ~-~l~~~~~~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 192 N-HVQKIASMMKPGSVATFYLPN 213 (275)
T ss_dssp G-SHHHHHHTEEEEEEEEEEESS
T ss_pred H-HHHHHHHHcCCCCEEEEEeCC
Confidence 4 999999999999999999873
|
| >2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=5.8e-06 Score=78.38 Aligned_cols=124 Identities=10% Similarity=0.034 Sum_probs=74.0
Q ss_pred CeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----c------------------------------
Q 009719 373 AIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----G------------------------------ 417 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----G------------------------------ 417 (527)
.-.+|||+|||.|.++..|..... -+|+-+|-. ..+..+-++ +
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 347899999999999988876654 233333332 333333221 1
Q ss_pred -cc-c-cccccCCCCCCCC---CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH--------
Q 009719 418 -LI-G-VYHDWCEPFSTYP---RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP-------- 483 (527)
Q Consensus 418 -Li-G-~~hdwce~fstYP---rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~-------- 483 (527)
-+ - ...|..+.-+.-+ .+||+|.+..++.... .+.=....+|-|+-|+|+|||++|+.+..
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~-----~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~ 208 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAAC-----PDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIG 208 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHC-----SSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEET
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhc-----CChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcC
Confidence 02 1 1123332211123 7999999988877321 00012467899999999999999997511
Q ss_pred ------H--HHHHHHHHHhcCCceeEEe
Q 009719 484 ------E--VIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 484 ------~--~~~~i~~i~~~l~W~~~~~ 503 (527)
. ..+.+.+++...-+++...
T Consensus 209 ~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 236 (265)
T 2i62_A 209 EQKFSSLPLGWETVRDAVEEAGYTIEQF 236 (265)
T ss_dssp TEEEECCCCCHHHHHHHHHHTTCEEEEE
T ss_pred CccccccccCHHHHHHHHHHCCCEEEEE
Confidence 0 2346777777777766543
|
| >2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42 | Back alignment and structure |
|---|
Probab=97.89 E-value=4.4e-06 Score=79.06 Aligned_cols=120 Identities=18% Similarity=0.210 Sum_probs=75.3
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccc------ccc-ccccCCCCCCCCCccchhhhcCcc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGL------IGV-YHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGL------iG~-~hdwce~fstYPrtyDLiHa~~~f 445 (527)
-.+|||+|||.|.++.+|..... -+|+-+|.. ..+..+-++.- +-. ..|. +.++.-+.+||+|.+..++
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l 156 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLF--REVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGL-QDFTPEPDSYDVIWIQWVI 156 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTC--SEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCG-GGCCCCSSCEEEEEEESCG
T ss_pred CCEEEEECCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcCh-hhcCCCCCCEEEEEEcchh
Confidence 46899999999999998877631 122223322 33343333310 111 1222 1223223589999999888
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH---------------HHHHHHHHHHhcCCceeEEe
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP---------------EVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~---------------~~~~~i~~i~~~l~W~~~~~ 503 (527)
..+. + =.+..+|-|+-|+|+|||.+++.+.. ...++++++++..-++....
T Consensus 157 ~~~~------~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 157 GHLT------D-QHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAE 222 (241)
T ss_dssp GGSC------H-HHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred hhCC------H-HHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEe
Confidence 7653 1 11347899999999999999996521 13667888888888876544
|
| >3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=97.89 E-value=1.8e-06 Score=83.00 Aligned_cols=118 Identities=14% Similarity=0.226 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCC--CeeEEEecCCCCCCchhHhhhc----cc--ccc-c
Q 009719 352 RRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKSSTLSVIYDR----GL--IGV-Y 422 (527)
Q Consensus 352 ~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~ntl~vi~eR----GL--iG~-~ 422 (527)
..+......+.+.+.....-..=.+|||+|||.|.++..|.+. ..-|.-|=+. ++.+..+-++ |+ +-. .
T Consensus 16 ~~~~~~~~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~~ 93 (276)
T 3mgg_A 16 LRLSEQAETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDIS--PESLEKARENTEKNGIKNVKFLQ 93 (276)
T ss_dssp -------CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESC--HHHHHHHHHHHHHTTCCSEEEEE
T ss_pred hhHHHHHHHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECC--HHHHHHHHHHHHHcCCCCcEEEE
Confidence 3344444444454443332233468999999999999988654 3333333221 1334443333 33 111 1
Q ss_pred cccCCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 423 HDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 423 hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.|.. .++.-+.+||+|++..++.... +...+|-++-|+|+|||++++.+
T Consensus 94 ~d~~-~~~~~~~~fD~v~~~~~l~~~~---------~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 94 ANIF-SLPFEDSSFDHIFVCFVLEHLQ---------SPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp CCGG-GCCSCTTCEEEEEEESCGGGCS---------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccc-cCCCCCCCeeEEEEechhhhcC---------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 2222 2232248999999999888664 23578999999999999999964
|
| >3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} | Back alignment and structure |
|---|
Probab=97.89 E-value=5.6e-05 Score=70.86 Aligned_cols=84 Identities=11% Similarity=-0.027 Sum_probs=60.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
.|.++.+|..++..+..+ |.++.+++.|+++ |++ +.+..+|+........+||+|++...+ +.. +
T Consensus 66 ~G~~~~~la~~~~~v~~v---D~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~-----~~~-~ 136 (204)
T 3njr_A 66 SGSVSVEWCLAGGRAITI---EPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG-----SQA-L 136 (204)
T ss_dssp TCHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC-----CHH-H
T ss_pred CCHHHHHHHHcCCEEEEE---eCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc-----cHH-H
Confidence 344455555555444444 7788899888765 555 567778877733334679999987654 344 9
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
+.++.|+|||||+++++..
T Consensus 137 l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 137 YDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp HHHHHHHSCTTCEEEEEEC
T ss_pred HHHHHHhcCCCcEEEEEec
Confidence 9999999999999999886
|
| >1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=1.1e-05 Score=81.45 Aligned_cols=69 Identities=19% Similarity=0.199 Sum_probs=53.9
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|. +.+++.|+++ +++ +.+..+|...+|+++. |+|+++.+++||.+.. ..+|+++.|+|||||++++...
T Consensus 221 D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~ 296 (359)
T 1x19_A 221 NL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA--DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDM 296 (359)
T ss_dssp EC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC--SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred ec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC--CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 44 4566666554 443 5677888888888865 9999999999998742 3499999999999999988763
|
| >3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi} | Back alignment and structure |
|---|
Probab=97.87 E-value=4.2e-05 Score=69.47 Aligned_cols=103 Identities=11% Similarity=-0.009 Sum_probs=71.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccC--------hH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY--------NA 214 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~--------~~ 214 (527)
.|.++..|..++ .+...|.++.|++. .....+.++|+.. |+++++||+|+|+..+++..+. ..
T Consensus 34 ~G~~~~~l~~~~----~v~gvD~s~~~~~~----~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~ 104 (170)
T 3q87_B 34 TGVITEQLRKRN----TVVSTDLNIRALES----HRGGNLVRADLLC-SINQESVDVVVFNPPYVPDTDDPIIGGGYLGR 104 (170)
T ss_dssp TCHHHHHHTTTS----EEEEEESCHHHHHT----CSSSCEEECSTTT-TBCGGGCSEEEECCCCBTTCCCTTTBCCGGGC
T ss_pred ccHHHHHHHhcC----cEEEEECCHHHHhc----ccCCeEEECChhh-hcccCCCCEEEECCCCccCCccccccCCcchH
Confidence 455555666666 34444788888877 2335677788876 8888999999999887654443 23
Q ss_pred HHHHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEe
Q 009719 215 TYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELI 261 (527)
Q Consensus 215 ~aL~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~ 261 (527)
.++.++.+.| |||++++..+... .-+.+.++.+...|+..
T Consensus 105 ~~~~~~~~~l-pgG~l~~~~~~~~------~~~~l~~~l~~~gf~~~ 144 (170)
T 3q87_B 105 EVIDRFVDAV-TVGMLYLLVIEAN------RPKEVLARLEERGYGTR 144 (170)
T ss_dssp HHHHHHHHHC-CSSEEEEEEEGGG------CHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHhhC-CCCEEEEEEecCC------CHHHHHHHHHHCCCcEE
Confidence 4899999999 9999999875211 12345556666666554
|
| >1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=97.87 E-value=7.7e-06 Score=76.59 Aligned_cols=83 Identities=7% Similarity=-0.060 Sum_probs=60.0
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcCC---CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI---PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEV 220 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~---pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei 220 (527)
|.++..|...+. .+...|.++.+++.|+++.. .+.+..+|......++++||+|++..+++|+. .++
T Consensus 82 G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~-------~~~ 151 (231)
T 1vbf_A 82 GYYTALIAEIVD---KVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWATAPTLL-------CKP 151 (231)
T ss_dssp SHHHHHHHHHSS---EEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSBBSSCC-------HHH
T ss_pred CHHHHHHHHHcC---EEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCcHHHHH-------HHH
Confidence 444445555543 23333778899999987632 45667778766333578999999999987764 478
Q ss_pred hhcccCCcEEEEecCC
Q 009719 221 DRLLRPGGYLVISGPP 236 (527)
Q Consensus 221 ~RVLRPGG~lviS~pp 236 (527)
.|+|||||+++++.++
T Consensus 152 ~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 152 YEQLKEGGIMILPIGV 167 (231)
T ss_dssp HHTEEEEEEEEEEECS
T ss_pred HHHcCCCcEEEEEEcC
Confidence 9999999999999874
|
| >1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20 | Back alignment and structure |
|---|
Probab=97.86 E-value=3.9e-05 Score=73.09 Aligned_cols=67 Identities=16% Similarity=0.101 Sum_probs=52.4
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCCCC---CCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLPFP---AFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LPFp---D~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++.++++|+++ +++ +.+..++++.++++ +++||+|+|... . +...++.++.|+|||||+|++...
T Consensus 101 D~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~----~-~~~~~l~~~~~~LkpgG~l~~~~g 175 (240)
T 1xdz_A 101 DSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARAV----A-RLSVLSELCLPLVKKNGLFVALKA 175 (240)
T ss_dssp ESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEECC----S-CHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred eCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEecc----C-CHHHHHHHHHHhcCCCCEEEEEeC
Confidence 7788888888753 553 66778888888875 789999998652 2 334499999999999999998743
|
| >1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=97.85 E-value=3.6e-06 Score=80.45 Aligned_cols=95 Identities=17% Similarity=0.172 Sum_probs=64.2
Q ss_pred CeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----ccc---ccccccCCCCCCCC-CccchhhhcC
Q 009719 373 AIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLI---GVYHDWCEPFSTYP-RTYDLIHVSG 443 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLi---G~~hdwce~fstYP-rtyDLiHa~~ 443 (527)
.-.+|||+|||.|.++..|....- .|+-.|.. ..+..+-++ |+- -+..|.. .++ +| .+||+|.+..
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~-~l~-~~~~~fD~V~~~~ 111 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE-QMP-FTDERFHIVTCRI 111 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CCC-SCTTCEEEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHH-hCC-CCCCCEEEEEEhh
Confidence 456899999999999998876532 44444433 444444333 431 1122322 233 34 8999999998
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
++-.+. +...+|-|+-|+|||||++++.+
T Consensus 112 ~l~~~~---------d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 112 AAHHFP---------NPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp CGGGCS---------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhHhcC---------CHHHHHHHHHHHcCCCCEEEEEE
Confidence 887653 24689999999999999999964
|
| >3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=97.85 E-value=3.2e-06 Score=77.86 Aligned_cols=97 Identities=10% Similarity=0.124 Sum_probs=65.2
Q ss_pred CeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccccccccccCCCCCCCC-CccchhhhcCccccccC
Q 009719 373 AIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGLIGVYHDWCEPFSTYP-RTYDLIHVSGIESLIKN 450 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGLiG~~hdwce~fstYP-rtyDLiHa~~~fs~~~~ 450 (527)
.-.+|||+|||.|.++.+|...+. +|+-.|.. ..+..+-++..--+..|..+.-..++ .+||+|.+..++....
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~- 107 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENGT---RVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLF- 107 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTTC---EEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEESCGGGSS-
T ss_pred CCCcEEEeCCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEECChhhhcC-
Confidence 346899999999999999988763 33333433 44444444432111223222112244 7999999998887653
Q ss_pred CCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 451 PGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 451 ~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+...+|-|+-|+|+|||++++..
T Consensus 108 --------~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 108 --------DPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp --------CHHHHHHHTGGGEEEEEEEEEEE
T ss_pred --------CHHHHHHHHHHHcCCCCEEEEEe
Confidence 23689999999999999999974
|
| >1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 | Back alignment and structure |
|---|
Probab=97.84 E-value=2.5e-06 Score=80.84 Aligned_cols=93 Identities=13% Similarity=0.181 Sum_probs=60.7
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhh----ccc---cc-cccccCCCCCCCCCccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD----RGL---IG-VYHDWCEPFSTYPRTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e----RGL---iG-~~hdwce~fstYPrtyDLiHa~~~ 444 (527)
.+|||+|||.|.++.+|.+. +.-| +-+|.. ..+..+-+ .|+ +- ...|+.+ ++. +.+||+|.+..+
T Consensus 38 ~~VLDiGcG~G~~~~~la~~~~~~v---~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~fD~V~~~~~ 112 (256)
T 1nkv_A 38 TRILDLGSGSGEMLCTWARDHGITG---TGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG-YVA-NEKCDVAACVGA 112 (256)
T ss_dssp CEEEEETCTTCHHHHHHHHHTCCEE---EEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT-CCC-SSCEEEEEEESC
T ss_pred CEEEEECCCCCHHHHHHHHhcCCeE---EEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHh-CCc-CCCCCEEEECCC
Confidence 58999999999999888643 3222 222222 33443332 344 11 2223332 222 689999999877
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+-.+. +...+|-|+-|+|||||.+++.+
T Consensus 113 ~~~~~---------~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 113 TWIAG---------GFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp GGGTS---------SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred hHhcC---------CHHHHHHHHHHHcCCCeEEEEec
Confidence 76542 24788999999999999999975
|
| >1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.84 E-value=1.2e-05 Score=77.53 Aligned_cols=84 Identities=20% Similarity=0.161 Sum_probs=61.1
Q ss_pred hhccccccccC---CeeEEeeccCcChHHHHHHHHHc-----C--C-CcEEeeccccCCCCCCCcccEEEecCccccccc
Q 009719 143 VASFGGSMLSE---NILTLSFAPRDSHKAQIQFALER-----G--I-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA 211 (527)
Q Consensus 143 vgsfga~Ll~r---~V~~msiAp~D~seaqvq~A~eR-----g--~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d 211 (527)
.|.++.+|... +..+..+ |.++.+++.|+++ | . ...+..+|+..+++++++||+|++. .++
T Consensus 110 ~G~~~~~l~~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~~-----~~~ 181 (280)
T 1i9g_A 110 SGALTLSLLRAVGPAGQVISY---EQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVLD-----MLA 181 (280)
T ss_dssp TSHHHHHHHHHHCTTSEEEEE---CSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEEE-----SSC
T ss_pred ccHHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEEC-----CcC
Confidence 34455555543 3333333 7778888888765 3 2 3567778988899999999999983 233
Q ss_pred ChHHHHHHHhhcccCCcEEEEecC
Q 009719 212 YNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 212 ~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
... +|.++.|+|||||+++++.+
T Consensus 182 ~~~-~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 182 PWE-VLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp GGG-GHHHHHHHEEEEEEEEEEES
T ss_pred HHH-HHHHHHHhCCCCCEEEEEeC
Confidence 334 89999999999999999987
|
| >2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A | Back alignment and structure |
|---|
Probab=97.84 E-value=7.8e-06 Score=77.36 Aligned_cols=94 Identities=15% Similarity=0.159 Sum_probs=63.4
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc------cccccccccCCCCCCCCCccchhhhcCccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR------GLIGVYHDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR------GLiG~~hdwce~fstYPrtyDLiHa~~~fs 446 (527)
-.+|||+|||.|.++..|.+...- |+-+|-. ..+..+-++ ++--+..|. +.++.-+.+||+|++..++.
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIARGYR---YIALDADAAMLEVFRQKIAGVDRKVQVVQADA-RAIPLPDESVHGVIVVHLWH 115 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTTTCE---EEEEESCHHHHHHHHHHTTTSCTTEEEEESCT-TSCCSCTTCEEEEEEESCGG
T ss_pred CCEEEEeCCcCCHHHHHHHHCCCE---EEEEECCHHHHHHHHHHhhccCCceEEEEccc-ccCCCCCCCeeEEEECCchh
Confidence 468999999999999999877543 3333332 445554444 111122233 23332237899999998877
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
... +...+|-|+-|+|+|||.+++.
T Consensus 116 ~~~---------~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 116 LVP---------DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GCT---------THHHHHHHHHHHEEEEEEEEEE
T ss_pred hcC---------CHHHHHHHHHHHCCCCcEEEEE
Confidence 542 3477999999999999999986
|
| >3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.83 E-value=1.4e-05 Score=77.27 Aligned_cols=71 Identities=18% Similarity=0.169 Sum_probs=50.9
Q ss_pred cChHHHHHHHHHc----------CC-CcEEeeccccC-CC--CCCCcccEEEecCcccccccCh--------HHHHHHHh
Q 009719 164 DSHKAQIQFALER----------GI-PAFVAMLGTRR-LP--FPAFSFDIVHCSRCLIPFTAYN--------ATYLIEVD 221 (527)
Q Consensus 164 D~seaqvq~A~eR----------g~-pa~~~v~dae~-LP--FpD~SFDlV~cs~~l~hw~d~~--------~~aL~Ei~ 221 (527)
|.++.|++.|+++ +. .+.+..+|+.. || |++++||.|++... .+|.... ..+|.++.
T Consensus 77 Dis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~v~~~~~-dp~~k~~h~krr~~~~~~l~~~~ 155 (235)
T 3ckk_A 77 EIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTKMFFLFP-DPHFKRTKHKWRIISPTLLAEYA 155 (235)
T ss_dssp ESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEEEEEESC-C-----------CCCHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeEEEEeCC-CchhhhhhhhhhhhhHHHHHHHH
Confidence 6677888877642 33 35677788876 88 89999999987654 2443210 24999999
Q ss_pred hcccCCcEEEEecC
Q 009719 222 RLLRPGGYLVISGP 235 (527)
Q Consensus 222 RVLRPGG~lviS~p 235 (527)
|+|||||.|++.+.
T Consensus 156 ~~LkpGG~l~~~td 169 (235)
T 3ckk_A 156 YVLRVGGLVYTITD 169 (235)
T ss_dssp HHEEEEEEEEEEES
T ss_pred HHCCCCCEEEEEeC
Confidence 99999999999875
|
| >3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=97.83 E-value=6.8e-06 Score=79.76 Aligned_cols=116 Identities=11% Similarity=0.144 Sum_probs=72.9
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc-cc-cccccCCCCCCCCCccchhhhcCccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL-IG-VYHDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL-iG-~~hdwce~fstYPrtyDLiHa~~~fs 446 (527)
-..|||+|||.|.++.+|..... +|+-+|-. ..+..+-+ .|+ +- +..|..+ ++. +.+||+|.+..+|.
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~g~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~-~~~fD~i~~~~~~~ 195 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLLGY---DVTSWDHNENSIAFLNETKEKENLNISTALYDINA-ANI-QENYDFIVSTVVFM 195 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGG-CCC-CSCEEEEEECSSGG
T ss_pred CCcEEEECCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHcCCceEEEEecccc-ccc-cCCccEEEEccchh
Confidence 35799999999999999987754 33333332 33333332 343 11 1122222 222 68999999999887
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeCC--------------HHHHHHHHHHHhcCCceeEEe
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS--------------PEVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~--------------~~~~~~i~~i~~~l~W~~~~~ 503 (527)
... .-.+..+|-++-|+|+|||.+++-.. .-.-.+++++... |++...
T Consensus 196 ~~~-------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~ 257 (286)
T 3m70_A 196 FLN-------RERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEY 257 (286)
T ss_dssp GSC-------GGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred hCC-------HHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEE
Confidence 552 23456799999999999999777421 0013456666666 887655
|
| >3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} | Back alignment and structure |
|---|
Probab=97.83 E-value=4e-06 Score=80.34 Aligned_cols=94 Identities=24% Similarity=0.327 Sum_probs=62.3
Q ss_pred eeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhc----ccc---c-cccccCCCCCCCC-Cccchhhhc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDR----GLI---G-VYHDWCEPFSTYP-RTYDLIHVS 442 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eR----GLi---G-~~hdwce~fstYP-rtyDLiHa~ 442 (527)
-.+|||+|||.|.++..|.+. +.- |+-++-. ..+..+-++ |+- - +..|..+ ++ +| .+||+|.+.
T Consensus 62 ~~~vLDiGcG~G~~~~~l~~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~-~~~~~fD~v~~~ 136 (273)
T 3bus_A 62 GDRVLDVGCGIGKPAVRLATARDVR---VTGISISRPQVNQANARATAAGLANRVTFSYADAMD-LP-FEDASFDAVWAL 136 (273)
T ss_dssp TCEEEEESCTTSHHHHHHHHHSCCE---EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS-CC-SCTTCEEEEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhcCCE---EEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcccc-CC-CCCCCccEEEEe
Confidence 458999999999999888653 332 2223322 444444333 442 1 1223322 22 34 799999999
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.+|.... +...+|-|+-|+|+|||.+++.+
T Consensus 137 ~~l~~~~---------~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 137 ESLHHMP---------DRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp SCTTTSS---------CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred chhhhCC---------CHHHHHHHHHHHcCCCeEEEEEE
Confidence 8887653 23688999999999999999985
|
| >1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4 | Back alignment and structure |
|---|
Probab=97.83 E-value=4e-06 Score=75.02 Aligned_cols=116 Identities=16% Similarity=0.155 Sum_probs=70.0
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc-----cccccccCCCCCCCCCccchhhhcC
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL-----IGVYHDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL-----iG~~hdwce~fstYPrtyDLiHa~~ 443 (527)
-.+|||+|||.|.++.+|..... +|.-.|.. ..+..+-++ |+ --+..|..+.++ +.+||+|.++.
T Consensus 53 ~~~vLdiG~G~G~~~~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~ 127 (194)
T 1dus_A 53 DDDILDLGCGYGVIGIALADEVK---STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--DRKYNKIITNP 127 (194)
T ss_dssp TCEEEEETCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--TSCEEEEEECC
T ss_pred CCeEEEeCCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--cCCceEEEECC
Confidence 35899999999999988877633 23333322 334443333 32 123344444333 57899999876
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH-HHHHHHHHHHhcCCceeEE
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP-EVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~-~~~~~i~~i~~~l~W~~~~ 502 (527)
.|... .-.+..++-++-|+|+|||.+++.+.. +...++.+.++..-+++..
T Consensus 128 ~~~~~--------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 179 (194)
T 1dus_A 128 PIRAG--------KEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVET 179 (194)
T ss_dssp CSTTC--------HHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCEE
T ss_pred Ccccc--------hhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcceEE
Confidence 55421 113457899999999999999998643 3334344444443334433
|
| >3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} | Back alignment and structure |
|---|
Probab=97.83 E-value=2.2e-05 Score=69.85 Aligned_cols=112 Identities=16% Similarity=0.113 Sum_probs=72.3
Q ss_pred eeeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhhc----ccc---ccccccCCCCCCCCCccchhhhcC
Q 009719 374 IRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYDR----GLI---GVYHDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~eR----GLi---G~~hdwce~fstYPrtyDLiHa~~ 443 (527)
-.+|||+|||.|.++..|... ..-| +-.|-. ..+..+-++ |+- -+..|..+.|+..+.+||+|.+..
T Consensus 26 ~~~vldiG~G~G~~~~~l~~~~~~~~v---~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~ 102 (178)
T 3hm2_A 26 HETLWDIGGGSGSIAIEWLRSTPQTTA---VCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGG 102 (178)
T ss_dssp TEEEEEESTTTTHHHHHHHTTSSSEEE---EEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC
T ss_pred CCeEEEeCCCCCHHHHHHHHHCCCCeE---EEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECC
Confidence 468999999999999988665 3323 223332 344444433 432 222344455554447899999875
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-HHHHHHHHHHHhcCCceeE
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-PEVIDKVSRIANTVRWTAA 501 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-~~~~~~i~~i~~~l~W~~~ 501 (527)
.+.. ..++-++-|+|+|||.+++.+. .+....+.++.+...+++.
T Consensus 103 ~~~~-------------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (178)
T 3hm2_A 103 GLTA-------------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTIS 148 (178)
T ss_dssp -TTC-------------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEE
T ss_pred cccH-------------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeE
Confidence 5542 5689999999999999999863 4455666666666655543
|
| >3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=1.1e-06 Score=83.11 Aligned_cols=87 Identities=15% Similarity=0.084 Sum_probs=66.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
.|.++.+|..++..+. ..|.++.+++.|+++ ++ .+.+.++|+..++ ++++||+|++...++|..+... .
T Consensus 89 ~G~~~~~la~~~~~v~---~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~~~~~~~~-~ 163 (241)
T 3gdh_A 89 VGGNTIQFALTGMRVI---AIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWGGPDYATA-E 163 (241)
T ss_dssp TSHHHHHHHHTTCEEE---EEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCSSGGGGGS-S
T ss_pred cCHHHHHHHHcCCEEE---EEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcCCcchhhh-H
Confidence 4566667777764433 347888899888754 54 4677888988877 7789999999988877655544 7
Q ss_pred HHHHhhcccCCcEEEEec
Q 009719 217 LIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~ 234 (527)
+.|+.|+|||||++++..
T Consensus 164 ~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 164 TFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp SBCTTTSCSSCHHHHHHH
T ss_pred HHHHHhhcCCcceeHHHH
Confidence 889999999999988754
|
| >3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ... | Back alignment and structure |
|---|
Probab=97.81 E-value=3.6e-05 Score=72.25 Aligned_cols=70 Identities=14% Similarity=0.157 Sum_probs=51.2
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccC-CCCCC-----CcccEEEecCcccccccChHHHHHHHhhcccCCcEEE
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRR-LPFPA-----FSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLV 231 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~-LPFpD-----~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lv 231 (527)
|.++.+++.|+++ ++. +.+.++|+.. +|... ++||+|++.....++.+... ++.++ |+|||||+++
T Consensus 90 D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~-~~~~~-~~LkpgG~lv 167 (221)
T 3u81_A 90 EINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTL-LLEKC-GLLRKGTVLL 167 (221)
T ss_dssp ESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEEEECSCGGGHHHHHH-HHHHT-TCCCTTCEEE
T ss_pred eCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEEEEcCCcccchHHHH-HHHhc-cccCCCeEEE
Confidence 6778888888764 543 5667777643 55433 79999999877666654433 67777 9999999999
Q ss_pred EecC
Q 009719 232 ISGP 235 (527)
Q Consensus 232 iS~p 235 (527)
+...
T Consensus 168 ~~~~ 171 (221)
T 3u81_A 168 ADNV 171 (221)
T ss_dssp ESCC
T ss_pred EeCC
Confidence 9764
|
| >3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=97.81 E-value=8.4e-06 Score=75.81 Aligned_cols=88 Identities=16% Similarity=0.158 Sum_probs=56.2
Q ss_pred hhccccccccC--CeeEEeeccCcChHHHHHH----HHH----cCC-CcEEeeccccCCCCCCCcccEEEecCc---c--
Q 009719 143 VASFGGSMLSE--NILTLSFAPRDSHKAQIQF----ALE----RGI-PAFVAMLGTRRLPFPAFSFDIVHCSRC---L-- 206 (527)
Q Consensus 143 vgsfga~Ll~r--~V~~msiAp~D~seaqvq~----A~e----Rg~-pa~~~v~dae~LPFpD~SFDlV~cs~~---l-- 206 (527)
.|.++.+|..+ +..+..+ |.++.|++. |++ ++. .+.+.++|++.+||++++ |.|..... +
T Consensus 38 ~G~~~~~la~~~p~~~v~gv---D~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~~~~~~~~~ 113 (218)
T 3mq2_A 38 DGKHPYKVARQNPSRLVVAL---DADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVLMPWGSLLR 113 (218)
T ss_dssp TCHHHHHHHHHCTTEEEEEE---ESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEESCCHHHHH
T ss_pred CCHHHHHHHHHCCCCEEEEE---ECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEEccchhhhh
Confidence 34444455554 3333333 555565553 222 244 356788999999999888 88873321 1
Q ss_pred cccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 207 IPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 207 ~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+|..+... +|.|+.|+|||||+|+++..
T Consensus 114 ~~~~~~~~-~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 114 GVLGSSPE-MLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp HHHTSSSH-HHHHHHHTEEEEEEEEEEEE
T ss_pred hhhccHHH-HHHHHHHHcCCCcEEEEEec
Confidence 14444455 99999999999999999653
|
| >2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.81 E-value=2.3e-05 Score=79.28 Aligned_cols=103 Identities=17% Similarity=0.111 Sum_probs=68.3
Q ss_pred ccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCccccc---c-cChHHHHHHHhhcccCCcEEEE
Q 009719 161 APRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPF---T-AYNATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 161 Ap~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw---~-d~~~~aL~Ei~RVLRPGG~lvi 232 (527)
...|.++.+++.|+++ ++...+..+|.. ++++++||+|+|+..+++- . +....+|.++.|+|||||.|++
T Consensus 224 ~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~--~~~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i 301 (343)
T 2pjd_A 224 TLCDVSAPAVEASRATLAANGVEGEVFASNVF--SEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRI 301 (343)
T ss_dssp EEEESBHHHHHHHHHHHHHTTCCCEEEECSTT--TTCCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEECCHHHHHHHHHHHHHhCCCCEEEEcccc--ccccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 3347778888888764 555566666654 3558899999999887541 1 1223499999999999999999
Q ss_pred ecCCCCCCCchhHHHHHHHHHHhcceEEeeeecceEEEeC
Q 009719 233 SGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKK 272 (527)
Q Consensus 233 S~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~~~~v~iwrK 272 (527)
..+... .+.. .++.... .++.+.+.....||+.
T Consensus 302 ~~~~~~---~~~~--~l~~~f~--~~~~~~~~~gf~v~~~ 334 (343)
T 2pjd_A 302 VANAFL---PYPD--VLDETFG--FHEVIAQTGRFKVYRA 334 (343)
T ss_dssp EEETTS---SHHH--HHHHHHS--CCEEEEECSSEEEEEE
T ss_pred EEcCCC---CcHH--HHHHhcC--ceEEEeeCCCEEEEEE
Confidence 876321 1221 1222222 2577777778888865
|
| >1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20 | Back alignment and structure |
|---|
Probab=97.81 E-value=1.1e-05 Score=74.12 Aligned_cols=128 Identities=13% Similarity=0.141 Sum_probs=74.4
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhh----ccc--cccc-cccCCCCCCCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD----RGL--IGVY-HDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e----RGL--iG~~-hdwce~fstYPrtyDLiHa~~~f 445 (527)
.+|||+|||.|.++.+|... |-. +|+-.|.. ..+..+-+ .|+ +-++ .|+.+ +. -+.+||+|.+..+
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~-~~~~~D~i~~~~~- 141 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEA--HFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEE-FP-SEPPFDGVISRAF- 141 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTS--EEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTT-SC-CCSCEEEEECSCS-
T ss_pred CeEEEECCCCCHHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhh-CC-ccCCcCEEEEecc-
Confidence 47999999999998888643 211 22222222 33333322 244 2222 23332 21 1378999987532
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCceeEEec--CCCCCCCCceEEEEEec
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAVHD--KEPGSNGREKILVATKS 521 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~~~~~--~e~~~~~~ekiLi~~K~ 521 (527)
. .+..++-++-|+|+|||++++......-++++++.+ .|+..... .-+...+...+++++|+
T Consensus 142 ~------------~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 142 A------------SLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE--EYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp S------------SHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--TEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred C------------CHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--CCceeeeeeeccCCCCCceEEEEEEec
Confidence 1 246789999999999999999865444556666655 67654311 12223345677777774
|
| >2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=97.81 E-value=8.3e-06 Score=78.37 Aligned_cols=116 Identities=17% Similarity=0.198 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccc-cccccccCCCC
Q 009719 352 RRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGL-IGVYHDWCEPF 429 (527)
Q Consensus 352 ~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGL-iG~~hdwce~f 429 (527)
..|+.......+.+...+. .-.+|||+|||.|.++..|.+... +|+-+|.. ..+..+-++.. .-+..|. +.+
T Consensus 35 ~~~~~~~~~~~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~d~-~~~ 108 (260)
T 2avn_A 35 PKWKLYHRLIGSFLEEYLK--NPCRVLDLGGGTGKWSLFLQERGF---EVVLVDPSKEMLEVAREKGVKNVVEAKA-EDL 108 (260)
T ss_dssp HHHHHHHHHHHHHHHHHCC--SCCEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHHTCSCEEECCT-TSC
T ss_pred cchhHHHHHHHHHHHHhcC--CCCeEEEeCCCcCHHHHHHHHcCC---eEEEEeCCHHHHHHHHhhcCCCEEECcH-HHC
Confidence 4564333334444444444 345899999999999999987754 33333333 45555555543 1111121 123
Q ss_pred CCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 430 STYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 430 stYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+.-+.+||+|-+...+..+. . +...+|-|+-|+|+|||.+++..
T Consensus 109 ~~~~~~fD~v~~~~~~~~~~------~--~~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 109 PFPSGAFEAVLALGDVLSYV------E--NKDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp CSCTTCEEEEEECSSHHHHC------S--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEcchhhhcc------c--cHHHHHHHHHHHcCCCeEEEEEe
Confidence 31137899999987665553 1 16789999999999999999975
|
| >1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=4.9e-06 Score=84.78 Aligned_cols=66 Identities=15% Similarity=0.068 Sum_probs=52.4
Q ss_pred cChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|. +.+++.|++. ..+.+..+|... |+|+ ||+|+++.+++||.+.. ..+|+++.|+|||||+|++..
T Consensus 240 D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 240 DL-PQVIENAPPL-SGIEHVGGDMFA-SVPQ--GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp EC-HHHHTTCCCC-TTEEEEECCTTT-CCCC--EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Ch-HHHHHhhhhc-CCCEEEeCCccc-CCCC--CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 66 6777766543 235667778766 7876 99999999999998765 149999999999999999975
|
| >1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=4e-06 Score=79.61 Aligned_cols=95 Identities=16% Similarity=0.235 Sum_probs=63.8
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc--cc-cccccCCCCCCCCCccchhhhcCcc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL--IG-VYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL--iG-~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
-.+|||+|||.|.++.+|.+..- +|+-+|.. ..+..+-+ +|+ +- +..|. +.++.-+.+||+|.+..++
T Consensus 22 ~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~v~~~~~l 97 (239)
T 1xxl_A 22 EHRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA-ESLPFPDDSFDIITCRYAA 97 (239)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT-TBCCSCTTCEEEEEEESCG
T ss_pred CCEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccc-ccCCCCCCcEEEEEECCch
Confidence 45899999999999998876542 33434433 44444333 243 11 12232 3343223899999999888
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
..+. +...+|-|+-|+|+|||++++.+
T Consensus 98 ~~~~---------~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 98 HHFS---------DVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp GGCS---------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcc---------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 7663 25789999999999999999974
|
| >1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20 | Back alignment and structure |
|---|
Probab=97.79 E-value=2.6e-05 Score=74.32 Aligned_cols=136 Identities=17% Similarity=0.165 Sum_probs=80.1
Q ss_pred eeeEeecCCCccchhhhcc--CCCeeEEEecCCCCCCchhHhhh----ccc--cccccccCCCCCC---CCCccchhhhc
Q 009719 374 IRNIMDMNAFFGGFAAALT--SDPVWVMNVVPARKSSTLSVIYD----RGL--IGVYHDWCEPFST---YPRTYDLIHVS 442 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~--~~~VwvMnvvp~~~~ntl~vi~e----RGL--iG~~hdwce~fst---YPrtyDLiHa~ 442 (527)
-.+|||+|||.|.++..|. ....-|.-|=.. +..+.++-+ .|+ +-+++.=.+.++. .+.+||+|.+.
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSL--NKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESC--HHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCC--HHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 3589999999998887775 333333333221 123333322 344 3333211122221 24789999986
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC---CHHHHHHHHHHHhcCCceeEEecC--CCCCCCCceEEE
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD---SPEVIDKVSRIANTVRWTAAVHDK--EPGSNGREKILV 517 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird---~~~~~~~i~~i~~~l~W~~~~~~~--e~~~~~~ekiLi 517 (527)
.+ .++..++-++-|+|+|||.+++-+ ..+.+.++.+.++...++...... -+...+...+++
T Consensus 149 ~~-------------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~ 215 (240)
T 1xdz_A 149 AV-------------ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMV 215 (240)
T ss_dssp CC-------------SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEE
T ss_pred cc-------------CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEE
Confidence 42 235678999999999999999875 244566677777777887643211 122223456777
Q ss_pred EEeccCC
Q 009719 518 ATKSLWK 524 (527)
Q Consensus 518 ~~K~~w~ 524 (527)
++|.=.+
T Consensus 216 ~~k~~~~ 222 (240)
T 1xdz_A 216 IRKIKNT 222 (240)
T ss_dssp EEECSCC
T ss_pred EEecCCC
Confidence 7776433
|
| >3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=97.79 E-value=7.7e-06 Score=79.24 Aligned_cols=95 Identities=13% Similarity=0.135 Sum_probs=63.8
Q ss_pred CeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc--cccccccccCCCCCCCCCccchhhhcCcccccc
Q 009719 373 AIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR--GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIK 449 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR--GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~ 449 (527)
.-.+|||+|||.|.++.+|.+...-|.- .|-. ..+..+-++ ++-=...|.. .++ ++.+||+|++..++....
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~g---vD~s~~~~~~a~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~~ 131 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGAEVLG---TDNAATMIEKARQNYPHLHFDVADAR-NFR-VDKPLDAVFSNAMLHWVK 131 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEE---EESCHHHHHHHHHHCTTSCEEECCTT-TCC-CSSCEEEEEEESCGGGCS
T ss_pred CCCEEEEecCCCCHHHHHHHhCCCeEEE---EECCHHHHHHHHhhCCCCEEEECChh-hCC-cCCCcCEEEEcchhhhCc
Confidence 3468999999999999999774433322 2322 444444444 2211222322 233 478999999998887543
Q ss_pred CCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 450 NPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 450 ~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+...+|-|+-|+|||||++++..
T Consensus 132 ---------d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 132 ---------EPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp ---------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---------CHHHHHHHHHHhcCCCcEEEEEe
Confidence 34678999999999999999963
|
| >3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=97.79 E-value=4.3e-06 Score=77.25 Aligned_cols=116 Identities=15% Similarity=0.120 Sum_probs=77.9
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc-cccccccccCCCCCCCCCccchhhhcCccccccCCC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR-GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPG 452 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR-GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~ 452 (527)
..|||+|||.|.++..|.+... +|+-+|.. ..+..+-++ ++--...|.. .++ .+.+||+|.+..++....
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~~--- 116 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAAGF---DVDATDGSPELAAEASRRLGRPVRTMLFH-QLD-AIDAYDAVWAHACLLHVP--- 116 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHTSCCEECCGG-GCC-CCSCEEEEEECSCGGGSC---
T ss_pred CcEEEECCCCCHHHHHHHHcCC---eEEEECCCHHHHHHHHHhcCCceEEeeec-cCC-CCCcEEEEEecCchhhcC---
Confidence 4899999999999999987754 33333433 555555555 3322222322 233 458999999998887542
Q ss_pred CCCCCCcccccceeecccccCCcEEEEeCCH---------------HHHHHHHHHHhcCC-ceeEE
Q 009719 453 SNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP---------------EVIDKVSRIANTVR-WTAAV 502 (527)
Q Consensus 453 ~~~~rC~~~~illEmDRILRP~G~~iird~~---------------~~~~~i~~i~~~l~-W~~~~ 502 (527)
.-+...+|-|+-|+|+|||++++.... -..+.++++++.-- +++..
T Consensus 117 ----~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~ 178 (211)
T 3e23_A 117 ----RDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVA 178 (211)
T ss_dssp ----HHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEE
T ss_pred ----HHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEE
Confidence 123467899999999999999997311 13567777777776 77654
|
| >3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=97.78 E-value=7.5e-06 Score=75.85 Aligned_cols=97 Identities=14% Similarity=0.210 Sum_probs=62.3
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc-------cccc-cccCCCCCCCCCccchhhh
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL-------IGVY-HDWCEPFSTYPRTYDLIHV 441 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL-------iG~~-hdwce~fstYPrtyDLiHa 441 (527)
.+|||+|||.|.++.+|..... +|+-.|-. ..+..+-+ .|+ +-.. .|. +.++.-+.+||+|-+
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASKGY---SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENA-SSLSFHDSSFDFAVM 107 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCT-TSCCSCTTCEEEEEE
T ss_pred CeEEEECCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecc-cccCCCCCceeEEEE
Confidence 4799999999999999977754 33333332 44444433 232 1111 121 222322479999999
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
..++.... +.-....+|-|+-|+|||||.+++.+
T Consensus 108 ~~~l~~~~------~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 108 QAFLTSVP------DPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp ESCGGGCC------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhcCC------CHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 98887654 21112378999999999999999974
|
| >3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=2e-06 Score=81.46 Aligned_cols=98 Identities=15% Similarity=0.167 Sum_probs=65.4
Q ss_pred CeeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhcc-----ccccccccCCCCCCCCCccchhhhcCcc
Q 009719 373 AIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDRG-----LIGVYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eRG-----LiG~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
.-.+|||+|||.|.++..|.+. ..- |+-+|-. ..+..+-++. +--+..|..+ ++.-+.+||+|.+..++
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l 130 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKYGAH---THGIDICSNIVNMANERVSGNNKIIFEANDILT-KEFPENNFDLIYSRDAI 130 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCE---EEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT-CCCCTTCEEEEEEESCG
T ss_pred CCCEEEEECCCCCHHHHHHHHHcCCE---EEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc-CCCCCCcEEEEeHHHHH
Confidence 3458999999999999998765 432 2333322 4555555543 1112334333 22224899999999888
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
..+. .-+...+|-|+-|+|||||.+++.+
T Consensus 131 ~~~~-------~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 131 LALS-------LENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp GGSC-------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhcC-------hHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 7651 1234678999999999999999985
|
| >2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=3.6e-05 Score=75.77 Aligned_cols=112 Identities=6% Similarity=0.092 Sum_probs=74.4
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
+|.|+-++..++.. .+...|.++.+++.|+++ ++. ..+..+|+..+++ +++||+|++... .....+
T Consensus 136 ~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p-----~~~~~~ 207 (278)
T 2frn_A 136 IGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV-----VRTHEF 207 (278)
T ss_dssp TTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC-----SSGGGG
T ss_pred CCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc-----hhHHHH
Confidence 56666666665543 233337788888888764 554 4577889988887 889999998533 122348
Q ss_pred HHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEee
Q 009719 217 LIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIA 262 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~ 262 (527)
+.++.|+|||||++++.+....-.......+.+.+.++...|+...
T Consensus 208 l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 208 IPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp HHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 9999999999999999664210000112345667777777776654
|
| >1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=3.3e-05 Score=68.91 Aligned_cols=101 Identities=12% Similarity=0.074 Sum_probs=65.7
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCCCCC-CcccEEEecCcccccccChHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLPFPA-FSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD-~SFDlV~cs~~l~hw~d~~~~a 216 (527)
|.++..+...+. .+...|.++.+++.|+++ +. ...+..+|... ++++ ++||+|++..++.|+ ..+
T Consensus 45 G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~~~----~~~ 116 (192)
T 1l3i_A 45 GGVTLELAGRVR---RVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVGGSGGEL----QEI 116 (192)
T ss_dssp SHHHHHHHTTSS---EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEESCCTTCH----HHH
T ss_pred CHHHHHHHHhcC---EEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCCCEEEECCchHHH----HHH
Confidence 344444555542 333447778888888764 44 34566667655 4444 689999999876543 349
Q ss_pred HHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcce
Q 009719 217 LIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCY 258 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW 258 (527)
+.++.|+|+|||++++..+. ......+.++.+...|
T Consensus 117 l~~~~~~l~~gG~l~~~~~~------~~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 117 LRIIKDKLKPGGRIIVTAIL------LETKFEAMECLRDLGF 152 (192)
T ss_dssp HHHHHHTEEEEEEEEEEECB------HHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCCcEEEEEecC------cchHHHHHHHHHHCCC
Confidence 99999999999999998762 2223344455555555
|
| >1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=2.1e-05 Score=68.66 Aligned_cols=133 Identities=16% Similarity=0.190 Sum_probs=72.9
Q ss_pred eeEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhhhccccccccccCCCCCC-------C-CCccchhhh
Q 009719 375 RNIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFST-------Y-PRTYDLIHV 441 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwce~fst-------Y-PrtyDLiHa 441 (527)
.+|||+|||.|.++.+|.+. .|..+-+-| -. . + . .+--+..|..+. +. + +.+||+|.+
T Consensus 24 ~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~-~-~----~-~~~~~~~d~~~~-~~~~~~~~~~~~~~~D~i~~ 94 (180)
T 1ej0_A 24 MTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MD-P-I----V-GVDFLQGDFRDE-LVMKALLERVGDSKVQVVMS 94 (180)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CC-C-C----T-TEEEEESCTTSH-HHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cc-c-c----C-cEEEEEcccccc-hhhhhhhccCCCCceeEEEE
Confidence 48999999999999888544 344444433 11 1 1 1 111112232221 10 2 378999999
Q ss_pred cCccccccCCCCCCCCCc------ccccceeecccccCCcEEEEeCC-HHHHHHHHHHHhcCCceeEE-e-cCCCCCCCC
Q 009719 442 SGIESLIKNPGSNKNSCS------LVDLMVEMDRMLRPEGTVVVRDS-PEVIDKVSRIANTVRWTAAV-H-DKEPGSNGR 512 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~------~~~illEmDRILRP~G~~iird~-~~~~~~i~~i~~~l~W~~~~-~-~~e~~~~~~ 512 (527)
+..+.... ....-. ...+|-++-|+|+|||.+++... .+....+.+.... .|+... . .........
T Consensus 95 ~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 169 (180)
T 1ej0_A 95 DMAPNMSG----TPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS-LFTKVKVRKPDSSRARSR 169 (180)
T ss_dssp CCCCCCCS----CHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHH-HEEEEEEECCTTSCTTCC
T ss_pred CCCccccC----CCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHH-hhhhEEeecCCcccccCc
Confidence 77665321 000000 14688899999999999999742 1222333333333 265433 2 222334456
Q ss_pred ceEEEEEec
Q 009719 513 EKILVATKS 521 (527)
Q Consensus 513 ekiLi~~K~ 521 (527)
|..++|++.
T Consensus 170 ~~~~~~~~~ 178 (180)
T 1ej0_A 170 EVYIVATGR 178 (180)
T ss_dssp EEEEEEEEE
T ss_pred eEEEEEccC
Confidence 888888763
|
| >2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=4.2e-06 Score=82.06 Aligned_cols=97 Identities=13% Similarity=0.217 Sum_probs=58.6
Q ss_pred eeeEeecCCCccchhhh----ccC--CCeeEEEecCCCCC-CchhHhhhc-----cccccccccC----CCCC-----CC
Q 009719 374 IRNIMDMNAFFGGFAAA----LTS--DPVWVMNVVPARKS-STLSVIYDR-----GLIGVYHDWC----EPFS-----TY 432 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAa----L~~--~~VwvMnvvp~~~~-ntl~vi~eR-----GLiG~~hdwc----e~fs-----tY 432 (527)
=..|||+|||.|.++.. |.. ..+-| .++-+|.. +-|..+-+| |+-.+--.|. +.+. .+
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v-~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPGVCI-NNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTTCEE-EEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCCcee-eEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 35799999999986542 322 23422 22333333 444444433 3322111111 1121 12
Q ss_pred -CCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 433 -PRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 433 -PrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
+.+||+|+|..++-.+. +....|-||-|+|+|||.+++.
T Consensus 132 ~~~~fD~V~~~~~l~~~~---------d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVK---------DIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp CCCCEEEEEEESCGGGCS---------CHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCceeEEEEeeeeeecC---------CHHHHHHHHHHHcCCCcEEEEE
Confidence 48999999998888664 2467999999999999999985
|
| >3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=97.76 E-value=1.2e-05 Score=77.46 Aligned_cols=95 Identities=21% Similarity=0.202 Sum_probs=61.9
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCCCchhHhhhccccc-cccccCCCCCCCCCccchhhhcCccccccCCC
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIG-VYHDWCEPFSTYPRTYDLIHVSGIESLIKNPG 452 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~ntl~vi~eRGLiG-~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~ 452 (527)
-.+|||+|||.|.++..|.+...-|.-|=+.. ..+..+-++.-+- +..|. +.++.-+.+||+||+..++..+.
T Consensus 35 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~--- 108 (261)
T 3ege_A 35 GSVIADIGAGTGGYSVALANQGLFVYAVEPSI--VMRQQAVVHPQVEWFTGYA-ENLALPDKSVDGVISILAIHHFS--- 108 (261)
T ss_dssp TCEEEEETCTTSHHHHHHHTTTCEEEEECSCH--HHHHSSCCCTTEEEECCCT-TSCCSCTTCBSEEEEESCGGGCS---
T ss_pred CCEEEEEcCcccHHHHHHHhCCCEEEEEeCCH--HHHHHHHhccCCEEEECch-hhCCCCCCCEeEEEEcchHhhcc---
Confidence 46899999999999999988654443332221 3233222332111 12232 33442248999999999887653
Q ss_pred CCCCCCcccccceeecccccCCcEEEEeC
Q 009719 453 SNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 453 ~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+...+|-|+-|+|| ||++++.+
T Consensus 109 ------~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 109 ------HLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp ------SHHHHHHHHHHHBC-SSCEEEEE
T ss_pred ------CHHHHHHHHHHHhC-CcEEEEEE
Confidence 34789999999999 99887764
|
| >4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=97.76 E-value=1.5e-05 Score=72.56 Aligned_cols=165 Identities=12% Similarity=0.052 Sum_probs=82.7
Q ss_pred hhhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCC--C--eeEEEecCCCCCCchhHhhhccc--cccc
Q 009719 349 ADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSD--P--VWVMNVVPARKSSTLSVIYDRGL--IGVY 422 (527)
Q Consensus 349 ~d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~--~--VwvMnvvp~~~~ntl~vi~eRGL--iG~~ 422 (527)
.+++.+.+.+-.+... . ..=.+|||+|||.|.++.+|.+. . |..+-+-|.--...-..+-..|+ -=+.
T Consensus 12 ~~~~~~~~~~~~~l~~----~--~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~ 85 (215)
T 4dzr_A 12 PDTEVLVEEAIRFLKR----M--PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAA 85 (215)
T ss_dssp HHHHHHHHHHHHHHTT----C--CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCH
T ss_pred ccHHHHHHHHHHHhhh----c--CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEE
Confidence 4556665555443321 1 23468999999999999888654 3 33332222211100011111121 1122
Q ss_pred cccCCCCCC---CCCccchhhhcCccccccCCC---CC----CCCCc----------ccccceeecccccCCcE-EEEeC
Q 009719 423 HDWCEPFST---YPRTYDLIHVSGIESLIKNPG---SN----KNSCS----------LVDLMVEMDRMLRPEGT-VVVRD 481 (527)
Q Consensus 423 hdwce~fst---YPrtyDLiHa~~~fs~~~~~~---~~----~~rC~----------~~~illEmDRILRP~G~-~iird 481 (527)
.|..+++.. .+.+||+|-++--|....... .+ ..... +..++-++-|+|+|||+ +++.-
T Consensus 86 ~d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 86 ADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp HHHHHHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred cchHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 344443321 237899999865443211000 00 00011 16788899999999999 77765
Q ss_pred CHHHHHHHHHHHh--cCCceeEEecCCCCCCCCceEEEEEec
Q 009719 482 SPEVIDKVSRIAN--TVRWTAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 482 ~~~~~~~i~~i~~--~l~W~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
.......+.+++. .-.|.....-. ...+.+++++++|+
T Consensus 166 ~~~~~~~~~~~l~~~~~gf~~~~~~~--~~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 166 GHNQADEVARLFAPWRERGFRVRKVK--DLRGIDRVIAVTRE 205 (215)
T ss_dssp TTSCHHHHHHHTGGGGGGTEECCEEE--CTTSCEEEEEEEEC
T ss_pred CCccHHHHHHHHHHhhcCCceEEEEE--ecCCCEEEEEEEEc
Confidence 5555566777776 55564322211 12235789998875
|
| >1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=97.75 E-value=7.2e-06 Score=76.64 Aligned_cols=111 Identities=12% Similarity=0.131 Sum_probs=75.0
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCC-CCchhHhhhccccccccccCCCCCCCCCccchhhhcCccccccCCCC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARK-SSTLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGS 453 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~-~ntl~vi~eRGLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~ 453 (527)
.+|||+|||.|.++..|... . -.|. +..+..+-++++--+..|. +.++.-+.+||+|.+..++....
T Consensus 49 ~~vLDiG~G~G~~~~~l~~~--~-----~vD~s~~~~~~a~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~---- 116 (219)
T 1vlm_A 49 GRGVEIGVGTGRFAVPLKIK--I-----GVEPSERMAEIARKRGVFVLKGTA-ENLPLKDESFDFALMVTTICFVD---- 116 (219)
T ss_dssp SCEEEETCTTSTTHHHHTCC--E-----EEESCHHHHHHHHHTTCEEEECBT-TBCCSCTTCEEEEEEESCGGGSS----
T ss_pred CcEEEeCCCCCHHHHHHHHH--h-----ccCCCHHHHHHHHhcCCEEEEccc-ccCCCCCCCeeEEEEcchHhhcc----
Confidence 58999999999999999887 1 1222 2455556665532222222 22332236999999998877543
Q ss_pred CCCCCcccccceeecccccCCcEEEEeCCH------------------------HHHHHHHHHHhcCCceeEE
Q 009719 454 NKNSCSLVDLMVEMDRMLRPEGTVVVRDSP------------------------EVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 454 ~~~rC~~~~illEmDRILRP~G~~iird~~------------------------~~~~~i~~i~~~l~W~~~~ 502 (527)
+...+|-++-|+|+|||.+++.+.. -..++++++++..-++...
T Consensus 117 -----~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~ 184 (219)
T 1vlm_A 117 -----DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFK 184 (219)
T ss_dssp -----CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred -----CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEE
Confidence 2467999999999999999997311 1246677788877777643
|
| >2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.75 E-value=0.0001 Score=65.38 Aligned_cols=108 Identities=9% Similarity=0.002 Sum_probs=70.5
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CC-CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLI 218 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~ 218 (527)
|.++..|...+..+.. .|.++.+++.|+++ ++ ...+..+|... ++++++||+|+|..+ .....++.
T Consensus 47 G~~~~~l~~~~~~v~~---vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~i~~~~~-----~~~~~~l~ 117 (183)
T 2yxd_A 47 GGMTVEIAKRCKFVYA---IDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFNKAFIGGT-----KNIEKIIE 117 (183)
T ss_dssp SHHHHHHHTTSSEEEE---EECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCSEEEECSC-----SCHHHHHH
T ss_pred CHHHHHHHhcCCeEEE---EeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCcEEEECCc-----ccHHHHHH
Confidence 4444445554433333 36778888888765 44 35667778766 888899999999877 23334999
Q ss_pred HHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeeeecceE
Q 009719 219 EVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTV 268 (527)
Q Consensus 219 Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~~~~v~ 268 (527)
++.|+ |||+++++.+. ......+.+..+...|+.......+.
T Consensus 118 ~~~~~--~gG~l~~~~~~------~~~~~~~~~~l~~~g~~~~~~~~~~~ 159 (183)
T 2yxd_A 118 ILDKK--KINHIVANTIV------LENAAKIINEFESRGYNVDAVNVFIS 159 (183)
T ss_dssp HHHHT--TCCEEEEEESC------HHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred HHhhC--CCCEEEEEecc------cccHHHHHHHHHHcCCeEEEEEeeee
Confidence 99999 99999999862 12233455555666666655443333
|
| >2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.75 E-value=2.1e-05 Score=73.39 Aligned_cols=90 Identities=12% Similarity=0.034 Sum_probs=62.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC-CcEEeeccccC-CCCCCCcccEEEecCcccccccChHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI-PAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~-pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
+|.++..++.++.. .+...|.++.+++.|+++ ++ .+.+.++|+.. +|+++++||+|++...+ |.... ..+
T Consensus 65 ~G~~~~~l~~~~~~--~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~-~~~~~-~~~ 140 (202)
T 2fpo_A 65 SGALGLEALSRYAA--GATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF-RRGLL-EET 140 (202)
T ss_dssp TCHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS-STTTH-HHH
T ss_pred cCHHHHHHHhcCCC--EEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC-CCCcH-HHH
Confidence 34455555666542 334448888999988764 44 45677788766 78888999999998663 44333 348
Q ss_pred HHHHhh--cccCCcEEEEecCC
Q 009719 217 LIEVDR--LLRPGGYLVISGPP 236 (527)
Q Consensus 217 L~Ei~R--VLRPGG~lviS~pp 236 (527)
+.++.+ +|||||+++++..+
T Consensus 141 l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 141 INLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp HHHHHHTTCEEEEEEEEEEEEG
T ss_pred HHHHHhcCccCCCcEEEEEECC
Confidence 888854 79999999998764
|
| >1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=1.8e-05 Score=79.60 Aligned_cols=69 Identities=20% Similarity=0.256 Sum_probs=51.8
Q ss_pred cChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|. +.+++.|+++ ++ .+.+..+|... +++.+ ||+|+++.+++||.+.. ..+|+++.|+|||||++++..+
T Consensus 214 D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~-~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 289 (360)
T 1tw3_A 214 EM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPRK-ADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER 289 (360)
T ss_dssp EC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSSC-EEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred cC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCCC-ccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 44 4566666543 44 35667777644 45544 99999999999998764 3599999999999999999865
|
| >1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=9.5e-06 Score=81.93 Aligned_cols=67 Identities=13% Similarity=0.021 Sum_probs=52.9
Q ss_pred cChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccC---CcEEEEecC
Q 009719 164 DSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRP---GGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRP---GG~lviS~p 235 (527)
|. +.+++.|++.. .+.+..+|... |+|+ ||+|+++.+++||.+.. ..+|+++.|+||| ||++++..+
T Consensus 219 D~-~~~~~~a~~~~-~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 219 DR-PQVVENLSGSN-NLTYVGGDMFT-SIPN--ADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp EC-HHHHTTCCCBT-TEEEEECCTTT-CCCC--CSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred eC-HHHHhhcccCC-CcEEEeccccC-CCCC--ccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 66 67887776532 25667778755 6764 99999999999998765 1499999999999 999999875
|
| >4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.74 E-value=9.5e-06 Score=78.68 Aligned_cols=95 Identities=13% Similarity=0.110 Sum_probs=64.6
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCCCchhHhhhc----cc---cccc-cccCCCCC-CCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDR----GL---IGVY-HDWCEPFS-TYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~ntl~vi~eR----GL---iG~~-hdwce~fs-tYPrtyDLiHa~~~f 445 (527)
..|||+|||.|.++..|.....-|.-|=+. +..+..+-++ |+ +-++ .|.. .++ ..+.+||+|.+..++
T Consensus 70 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 70 LRVLDAGGGEGQTAIKMAERGHQVILCDLS--AQMIDRAKQAAEAKGVSDNMQFIHCAAQ-DVASHLETPVDLILFHAVL 146 (285)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHC-CCGGGEEEEESCGG-GTGGGCSSCEEEEEEESCG
T ss_pred CEEEEeCCcchHHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcCCCcceEEEEcCHH-HhhhhcCCCceEEEECchh
Confidence 579999999999999998775533333221 2444444443 43 1122 2322 233 234899999999988
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.... +...+|-|+-|+|+|||.+++.+
T Consensus 147 ~~~~---------~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 147 EWVA---------DPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp GGCS---------CHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hccc---------CHHHHHHHHHHHcCCCeEEEEEE
Confidence 8653 23679999999999999999975
|
| >1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=97.74 E-value=8.7e-06 Score=75.34 Aligned_cols=117 Identities=18% Similarity=0.230 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----c--cccccccc
Q 009719 353 RWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----G--LIGVYHDW 425 (527)
Q Consensus 353 ~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----G--LiG~~hdw 425 (527)
.+..+.....+.+...+.. -.+|||+|||.|.++..|....- +|+-+|-. ..+..+-++ | +--+..|.
T Consensus 20 ~~~~~~~~~~~~l~~~~~~--~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~ 94 (227)
T 1ve3_A 20 EYRSRIETLEPLLMKYMKK--RGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDA 94 (227)
T ss_dssp HHHHHHHHHHHHHHHSCCS--CCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCT
T ss_pred HHHHHHHHHHHHHHHhcCC--CCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECch
Confidence 4445555555555444444 45899999999999998866543 33333332 444444333 1 11122333
Q ss_pred CCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 426 CEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 426 ce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
.+ ++.-+.+||+|.+..++..+. .-+...+|-++-|+|+|||.+++.+.
T Consensus 95 ~~-~~~~~~~~D~v~~~~~~~~~~-------~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 95 RK-LSFEDKTFDYVIFIDSIVHFE-------PLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp TS-CCSCTTCEEEEEEESCGGGCC-------HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hc-CCCCCCcEEEEEEcCchHhCC-------HHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 32 221137999999988744332 12346789999999999999999864
|
| >3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C* | Back alignment and structure |
|---|
Probab=97.73 E-value=2.5e-05 Score=74.29 Aligned_cols=83 Identities=14% Similarity=0.207 Sum_probs=59.6
Q ss_pred hhccccccccC---CeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccCh
Q 009719 143 VASFGGSMLSE---NILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN 213 (527)
Q Consensus 143 vgsfga~Ll~r---~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~ 213 (527)
.|.++.+|... +..+..+ |.++.+++.|+++ |++ ..+..+|... ++++++||+|++. .++..
T Consensus 104 ~G~~~~~l~~~~~~~~~v~~~---D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~D~v~~~-----~~~~~ 174 (255)
T 3mb5_A 104 SGALTLFLANIVGPEGRVVSY---EIREDFAKLAWENIKWAGFDDRVTIKLKDIYE-GIEEENVDHVILD-----LPQPE 174 (255)
T ss_dssp TSHHHHHHHHHHCTTSEEEEE---CSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG-CCCCCSEEEEEEC-----SSCGG
T ss_pred chHHHHHHHHHhCCCeEEEEE---ecCHHHHHHHHHHHHHcCCCCceEEEECchhh-ccCCCCcCEEEEC-----CCCHH
Confidence 34444455544 4433344 7788888888765 554 5667778764 4889999999973 34444
Q ss_pred HHHHHHHhhcccCCcEEEEecC
Q 009719 214 ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 214 ~~aL~Ei~RVLRPGG~lviS~p 235 (527)
. ++.++.|+|||||++++..+
T Consensus 175 ~-~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 175 R-VVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp G-GHHHHHHHEEEEEEEEEEES
T ss_pred H-HHHHHHHHcCCCCEEEEEEC
Confidence 4 99999999999999999876
|
| >3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=4.2e-06 Score=79.33 Aligned_cols=93 Identities=17% Similarity=0.188 Sum_probs=62.3
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhh----cccc----ccccccCCCCCCCCCccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD----RGLI----GVYHDWCEPFSTYPRTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e----RGLi----G~~hdwce~fstYPrtyDLiHa~~~ 444 (527)
..|||+|||.|.++..|... +. .|+-+|-. ..+..+-+ .|+- -+..|. +.++.-+.+||+|++..+
T Consensus 48 ~~vLDiG~G~G~~~~~l~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~ 123 (257)
T 3f4k_A 48 AKIADIGCGTGGQTLFLADYVKG---QITGIDLFPDFIEIFNENAVKANCADRVKGITGSM-DNLPFQNEELDLIWSEGA 123 (257)
T ss_dssp CEEEEETCTTSHHHHHHHHHCCS---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCSSCTTCEEEEEEESC
T ss_pred CeEEEeCCCCCHHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-hhCCCCCCCEEEEEecCh
Confidence 48999999999999888654 22 23333322 44444333 3432 123343 333322389999999987
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+... +...+|-|+-|+|||||++++.+
T Consensus 124 l~~~----------~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 124 IYNI----------GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp SCCC----------CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred Hhhc----------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 7643 35789999999999999999985
|
| >3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=1.1e-05 Score=77.23 Aligned_cols=86 Identities=15% Similarity=0.225 Sum_probs=51.6
Q ss_pred hccccccc--cCCeeEEeeccCcCh-HHHHHHH---HH----cCCC-cEEeeccccCCCCCCCcccEEEecCccccccc-
Q 009719 144 ASFGGSML--SENILTLSFAPRDSH-KAQIQFA---LE----RGIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA- 211 (527)
Q Consensus 144 gsfga~Ll--~r~V~~msiAp~D~s-eaqvq~A---~e----Rg~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d- 211 (527)
|.++.+|. ..+..++.+ |.+ ++|++.| ++ .+++ +.+.+++++.||. ..||.|.+..+..+|+.
T Consensus 36 G~~~~~la~~~~~~~v~Gv---D~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~--~~~d~v~~i~~~~~~~~~ 110 (225)
T 3p2e_A 36 GRNIYKLAINDQNTFYIGI---DPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPF--ELKNIADSISILFPWGTL 110 (225)
T ss_dssp SHHHHHHHHTCTTEEEEEE---CSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCG--GGTTCEEEEEEESCCHHH
T ss_pred cHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhh--hccCeEEEEEEeCCCcHH
Confidence 44444554 344433333 666 6677666 43 2454 5677889999864 23344444333333332
Q ss_pred ------ChHHHHHHHhhcccCCcEEEEec
Q 009719 212 ------YNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 212 ------~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
+...+|.|+.|+|||||+|++..
T Consensus 111 ~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 111 LEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp HHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 22238999999999999999943
|
| >1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3 | Back alignment and structure |
|---|
Probab=97.72 E-value=3.1e-05 Score=73.33 Aligned_cols=67 Identities=10% Similarity=0.067 Sum_probs=45.1
Q ss_pred cChHHH----HHHHHHcCCCcEEeeccccC----CCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQ----IQFALERGIPAFVAMLGTRR----LPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaq----vq~A~eRg~pa~~~v~dae~----LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++.| ++.|+++ ....+.++|+.. +|++ ++||+|+|.. ..| +....+|.|+.|+|||||+|+++.+
T Consensus 88 D~s~~~l~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~~-~~~--~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 88 EYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQDI-AQK--NQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp CCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEECC-CST--THHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ECCHHHHHHHHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEEec-cCh--hHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 555554 4555544 234555667655 4666 8999999973 222 2233469999999999999999853
|
| >3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=5.3e-06 Score=79.72 Aligned_cols=95 Identities=19% Similarity=0.190 Sum_probs=63.7
Q ss_pred eeeEeecCCCccchhhhccCCCe-eEEEecCCCCCCchhHhhhc----ccc---c-cccccCCCCCCCCCccchhhhcCc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKSSTLSVIYDR----GLI---G-VYHDWCEPFSTYPRTYDLIHVSGI 444 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~ntl~vi~eR----GLi---G-~~hdwce~fstYPrtyDLiHa~~~ 444 (527)
-.+|||+|||.|.++..|.+.+- -|.-|=+. +..+..+-++ |+- - +..|+ +.++.-+.+||+|.+..+
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~i~~~~~ 123 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGHVTGQVTGLDFL--SGFIDIFNRNARQSGLQNRVTGIVGSM-DDLPFRNEELDLIWSEGA 123 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTTCSSEEEEEESC--HHHHHHHHHHHHHTTCTTTEEEEECCT-TSCCCCTTCEEEEEESSC
T ss_pred CCEEEEeCCCCCHHHHHHHhccCCEEEEEeCC--HHHHHHHHHHHHHcCCCcCcEEEEcCh-hhCCCCCCCEEEEEEcCC
Confidence 45899999999999999987743 33333221 2444444333 431 1 22333 233322479999999988
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+... +...+|-++-|+|+|||++++.+
T Consensus 124 ~~~~----------~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 124 IYNI----------GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp GGGT----------CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ceec----------CHHHHHHHHHHHcCCCCEEEEEE
Confidence 8643 35789999999999999999975
|
| >3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=4.2e-05 Score=77.91 Aligned_cols=86 Identities=12% Similarity=0.130 Sum_probs=58.2
Q ss_pred hccccccccCCe-eEEeeccCcChHHHHHHHHH----cCCC--cEEeeccccCCCCCCCcccEEEecCccc--ccccChH
Q 009719 144 ASFGGSMLSENI-LTLSFAPRDSHKAQIQFALE----RGIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLI--PFTAYNA 214 (527)
Q Consensus 144 gsfga~Ll~r~V-~~msiAp~D~seaqvq~A~e----Rg~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~--hw~d~~~ 214 (527)
|.++..+..++. .+..+ |.++ +++.|++ .+.. +.+..++.+.+|+++++||+|+|..+.. +......
T Consensus 78 G~~~~~la~~g~~~v~gv---D~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~~~~ 153 (349)
T 3q7e_A 78 GILCMFAAKAGARKVIGI---ECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLN 153 (349)
T ss_dssp SHHHHHHHHTTCSEEEEE---ECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBTBTBTCCHH
T ss_pred hHHHHHHHHCCCCEEEEE---CcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccccccCchhHH
Confidence 444444555543 23333 4452 6666654 3554 6788899999999999999999965432 2334444
Q ss_pred HHHHHHhhcccCCcEEEEe
Q 009719 215 TYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 215 ~aL~Ei~RVLRPGG~lviS 233 (527)
.++.++.|+|||||+++.+
T Consensus 154 ~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 154 TVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp HHHHHHHHHEEEEEEEESC
T ss_pred HHHHHHHHhCCCCCEEccc
Confidence 5999999999999999854
|
| >3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=97.71 E-value=1.1e-05 Score=74.57 Aligned_cols=131 Identities=13% Similarity=0.051 Sum_probs=82.3
Q ss_pred eeEeecCCCccchhhhccCCC---eeEEEecCCCCC-CchhHhhhc----cc--c-ccccccCCCCCCCCCccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTSDP---VWVMNVVPARKS-STLSVIYDR----GL--I-GVYHDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~---VwvMnvvp~~~~-ntl~vi~eR----GL--i-G~~hdwce~fstYPrtyDLiHa~~ 443 (527)
.+|||+|||.|.++.+|...- .-|.- +|.. ..+..+-++ |+ + =+..|.. .++.-..+||+|.+..
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~~v~~---vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~ 114 (219)
T 3dh0_A 39 MTVLDVGTGAGFYLPYLSKMVGEKGKVYA---IDVQEEMVNYAWEKVNKLGLKNVEVLKSEEN-KIPLPDNTVDFIFMAF 114 (219)
T ss_dssp CEEEESSCTTCTTHHHHHHHHTTTCEEEE---EESCHHHHHHHHHHHHHHTCTTEEEEECBTT-BCSSCSSCEEEEEEES
T ss_pred CEEEEEecCCCHHHHHHHHHhCCCcEEEE---EECCHHHHHHHHHHHHHcCCCcEEEEecccc-cCCCCCCCeeEEEeeh
Confidence 489999999999999885432 22222 2222 334433333 32 1 1222322 2222237899999998
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-------------HHHHHHHHHHHhcCCceeEEecCCCCCC
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-------------PEVIDKVSRIANTVRWTAAVHDKEPGSN 510 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-------------~~~~~~i~~i~~~l~W~~~~~~~e~~~~ 510 (527)
++..+. +...+|-|+-|+|+|||.+++.+- .-..++++++++..-++......- +
T Consensus 115 ~l~~~~---------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~-~-- 182 (219)
T 3dh0_A 115 TFHELS---------EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEV-G-- 182 (219)
T ss_dssp CGGGCS---------SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEE-T--
T ss_pred hhhhcC---------CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEee-C--
Confidence 887653 246789999999999999999741 112577888888888886543211 1
Q ss_pred CCceEEEEEec
Q 009719 511 GREKILVATKS 521 (527)
Q Consensus 511 ~~ekiLi~~K~ 521 (527)
....+++++|+
T Consensus 183 ~~~~~~~~~k~ 193 (219)
T 3dh0_A 183 KYCFGVYAMIV 193 (219)
T ss_dssp TTEEEEEEECC
T ss_pred CceEEEEEEec
Confidence 24567777775
|
| >2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.71 E-value=1.6e-05 Score=73.23 Aligned_cols=93 Identities=22% Similarity=0.245 Sum_probs=61.2
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc--cccccccccCCCCCCCCCccchhhhcCccccccC
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR--GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKN 450 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR--GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~ 450 (527)
-.+|||+|||.|.++..| ... +|+-+|.. ..+..+-++ ++--+..|. +.++.-+.+||+|.+..++....
T Consensus 37 ~~~vLdiG~G~G~~~~~l-~~~----~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~- 109 (211)
T 2gs9_A 37 GESLLEVGAGTGYWLRRL-PYP----QKVGVEPSEAMLAVGRRRAPEATWVRAWG-EALPFPGESFDVVLLFTTLEFVE- 109 (211)
T ss_dssp CSEEEEETCTTCHHHHHC-CCS----EEEEECCCHHHHHHHHHHCTTSEEECCCT-TSCCSCSSCEEEEEEESCTTTCS-
T ss_pred CCeEEEECCCCCHhHHhC-CCC----eEEEEeCCHHHHHHHHHhCCCcEEEEccc-ccCCCCCCcEEEEEEcChhhhcC-
Confidence 458999999999999998 220 22233333 445555554 221122222 22332237999999998877542
Q ss_pred CCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 451 PGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 451 ~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+...+|-|+-|+|+|||.+++.+
T Consensus 110 --------~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 110 --------DVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp --------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------CHHHHHHHHHHHcCCCCEEEEEe
Confidence 35789999999999999999985
|
| >3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=97.71 E-value=2.6e-05 Score=72.98 Aligned_cols=141 Identities=11% Similarity=0.040 Sum_probs=83.1
Q ss_pred eeEeecCCC-ccchhhhccCC-CeeEEEecCCCCC-CchhHhhh----ccc-cccc-cccCCCCCCCC-CccchhhhcCc
Q 009719 375 RNIMDMNAF-FGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD----RGL-IGVY-HDWCEPFSTYP-RTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag-~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e----RGL-iG~~-hdwce~fstYP-rtyDLiHa~~~ 444 (527)
.+|||+||| .|.++.+|... .. +|+-+|.. ..+..+-+ .|+ +-++ .|+ +.+..+| .+||+|-++-.
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKFFNC---KVTATEVDEEFFEYARRNIERNNSNVRLVKSNG-GIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHHHCC---EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS-CSSTTTCCSCEEEEEECCC
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc-hhhhhcccCceeEEEECCC
Confidence 579999999 99999888655 22 22333322 33333322 243 2222 232 1233344 89999998755
Q ss_pred cccccCCCC----------CCCCCcccccceeecccccCCcEEEEe--CCHHHHHHHHHHHhcCCceeEEecCCCCCCCC
Q 009719 445 ESLIKNPGS----------NKNSCSLVDLMVEMDRMLRPEGTVVVR--DSPEVIDKVSRIANTVRWTAAVHDKEPGSNGR 512 (527)
Q Consensus 445 fs~~~~~~~----------~~~rC~~~~illEmDRILRP~G~~iir--d~~~~~~~i~~i~~~l~W~~~~~~~e~~~~~~ 512 (527)
|....+... ......+..++-++-|+|+|||.+++- ...+...++.+.++...|++.......|. ..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~g~-~~ 211 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIKFKVGT-RW 211 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEECCCC--C
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEEecCCC-eE
Confidence 543210000 001111356888999999999999884 45567788888888889988776544333 23
Q ss_pred ceEEEEEe
Q 009719 513 EKILVATK 520 (527)
Q Consensus 513 ekiLi~~K 520 (527)
-.+|+.+|
T Consensus 212 ~~~l~f~~ 219 (230)
T 3evz_A 212 RHSLIFFK 219 (230)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 45666665
|
| >2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A | Back alignment and structure |
|---|
Probab=97.70 E-value=1.6e-06 Score=79.43 Aligned_cols=111 Identities=15% Similarity=0.111 Sum_probs=70.5
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc-cccc-cccCCCCCCCC-CccchhhhcCcccc
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL-IGVY-HDWCEPFSTYP-RTYDLIHVSGIESL 447 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL-iG~~-hdwce~fstYP-rtyDLiHa~~~fs~ 447 (527)
+|||+|||.|.++.+|.+... +|+-.|.. ..+..+-++ |+ +-++ .|. +.++ +| .+||+|.+. +.+
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~-~~~~~fD~v~~~--~~~ 104 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY---EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNL-ADFD-IVADAWEGIVSI--FCH 104 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC---EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBT-TTBS-CCTTTCSEEEEE--CCC
T ss_pred CEEEECCCCCHhHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEEcCh-hhcC-CCcCCccEEEEE--hhc
Confidence 899999999999999988764 44444443 445544444 33 1111 122 2222 33 799999984 322
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeCC----H-------------HHHHHHHHHHhcCCceeEE
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS----P-------------EVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~----~-------------~~~~~i~~i~~~l~W~~~~ 502 (527)
+ ..-....+|-++-|+|+|||.+++.+. . -..++++++++ -|++..
T Consensus 105 ~-------~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~ 167 (202)
T 2kw5_A 105 L-------PSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLI 167 (202)
T ss_dssp C-------CHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEE
T ss_pred C-------CHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEE
Confidence 2 112346789999999999999999841 0 12456777766 676643
|
| >1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=7.4e-06 Score=73.17 Aligned_cols=112 Identities=17% Similarity=0.221 Sum_probs=71.4
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc---cc-cccccCCCCCCCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL---IG-VYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL---iG-~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
.+|+|+|||.|.++..|...-. +|+-.|.. ..+..+-+ .|+ +- ...|+.+.++.. .+||+|-++..+
T Consensus 35 ~~vldiG~G~G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~~~ 110 (192)
T 1l3i_A 35 DVAVDVGCGTGGVTLELAGRVR---RVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI-PDIDIAVVGGSG 110 (192)
T ss_dssp CEEEEESCTTSHHHHHHHTTSS---EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-CCEEEEEESCCT
T ss_pred CEEEEECCCCCHHHHHHHHhcC---EEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-CCCCEEEECCch
Confidence 5899999999999988877652 33333332 33333333 232 11 122333322211 479999887554
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC-CHHHHHHHHHHHhcCCceeEE
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~i~~i~~~l~W~~~~ 502 (527)
.. +..+|-++-|+|+|||.+++.+ ..+...++.++++...|++..
T Consensus 111 ~~------------~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~ 156 (192)
T 1l3i_A 111 GE------------LQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDVNI 156 (192)
T ss_dssp TC------------HHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCEE
T ss_pred HH------------HHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCceEE
Confidence 32 3678999999999999999976 456677777877776665543
|
| >3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A | Back alignment and structure |
|---|
Probab=97.69 E-value=1.6e-05 Score=77.71 Aligned_cols=98 Identities=10% Similarity=0.090 Sum_probs=63.5
Q ss_pred CCeeeEeecCCCccchhhhccCC---CeeEEEecCCCCCCchhHhhhc----cc-cc-cccccCCCCCCCCCccchhhhc
Q 009719 372 PAIRNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKSSTLSVIYDR----GL-IG-VYHDWCEPFSTYPRTYDLIHVS 442 (527)
Q Consensus 372 ~~iRnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~ntl~vi~eR----GL-iG-~~hdwce~fstYPrtyDLiHa~ 442 (527)
..-.+|||+|||.|.++..|.+. ..-|.-|=+ .+..+..+-++ |+ +- ...|.. .++ ++.+||+||+.
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~--s~~~~~~a~~~~~~~~~~v~~~~~d~~-~~~-~~~~fD~v~~~ 96 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDS--GETLLAEARELFRLLPYDSEFLEGDAT-EIE-LNDKYDIAICH 96 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEES--CHHHHHHHHHHHHSSSSEEEEEESCTT-TCC-CSSCEEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEEC--CHHHHHHHHHHHHhcCCceEEEEcchh-hcC-cCCCeeEEEEC
Confidence 34568999999999999999765 233332221 11333333222 21 11 222333 233 47899999999
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
.++.... +...+|-|+-|+|+|||++++.+.
T Consensus 97 ~~l~~~~---------~~~~~l~~~~~~LkpgG~l~~~~~ 127 (284)
T 3gu3_A 97 AFLLHMT---------TPETMLQKMIHSVKKGGKIICFEP 127 (284)
T ss_dssp SCGGGCS---------SHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ChhhcCC---------CHHHHHHHHHHHcCCCCEEEEEec
Confidence 8887653 236899999999999999998753
|
| >3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15} | Back alignment and structure |
|---|
Probab=97.68 E-value=8.2e-06 Score=76.34 Aligned_cols=94 Identities=16% Similarity=0.230 Sum_probs=61.0
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc-cc-cccccCCCCCCCCCccchhhhcC-ccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL-IG-VYHDWCEPFSTYPRTYDLIHVSG-IES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL-iG-~~hdwce~fstYPrtyDLiHa~~-~fs 446 (527)
.+|||+|||.|.++..|.+. . +|+-+|.. ..+..+-++ |. +- +..|..+ ++ .+.+||+|-+.. ++.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~-~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH-Y---EVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRE-LE-LPEPVDAITILCDSLN 108 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT-S---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGG-CC-CSSCEEEEEECTTGGG
T ss_pred CeEEEecCCCCHHHHHHhhC-C---eEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhh-cC-CCCCcCEEEEeCCchh
Confidence 68999999999999999887 2 44444433 444444443 21 11 1112221 22 458999999875 555
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
... +.-....+|-++-|+|+|||.+++.
T Consensus 109 ~~~------~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 109 YLQ------TEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp GCC------SHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcC------CHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 442 2234567889999999999999983
|
| >3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=97.67 E-value=9.8e-06 Score=76.93 Aligned_cols=101 Identities=16% Similarity=0.150 Sum_probs=66.4
Q ss_pred ccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc----ccccccccCCCCCCCCCccchhhhc
Q 009719 368 KLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG----LIGVYHDWCEPFSTYPRTYDLIHVS 442 (527)
Q Consensus 368 ~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG----LiG~~hdwce~fstYPrtyDLiHa~ 442 (527)
.+....=.+|||+|||.|.++.+|.+...- +|+-+|-. ..+..+-++. +-=+..|. +.++.-+.+||+|.+.
T Consensus 39 ~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~ 115 (253)
T 3g5l_A 39 MLPDFNQKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAI-EDIAIEPDAYNVVLSS 115 (253)
T ss_dssp TCCCCTTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCG-GGCCCCTTCEEEEEEE
T ss_pred hhhccCCCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcch-hhCCCCCCCeEEEEEc
Confidence 344334578999999999999999766431 23333332 4455554442 11112222 2233223899999999
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
.++..+. +...+|-|+-|+|+|||.+++.
T Consensus 116 ~~l~~~~---------~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 116 LALHYIA---------SFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp SCGGGCS---------CHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhhhhh---------hHHHHHHHHHHHcCCCcEEEEE
Confidence 9887653 2578999999999999999997
|
| >2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=2.4e-05 Score=79.56 Aligned_cols=67 Identities=13% Similarity=0.152 Sum_probs=49.1
Q ss_pred cChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecC---cccccccChHHHHHHHhhcccCCcEEEE
Q 009719 164 DSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSR---CLIPFTAYNATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 164 D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~---~l~hw~d~~~~aL~Ei~RVLRPGG~lvi 232 (527)
|.++ +++.|+++ +. .+.+..++++.+++++++||+|+|.. ++.|- .....+|.++.|+|||||+++.
T Consensus 94 D~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~-~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 94 DQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFE-SMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp ESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBTTBTTT-CHHHHHHHHHHHHEEEEEEEES
T ss_pred ChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchhhccCH-HHHHHHHHHHHhhcCCCcEEEc
Confidence 4443 66666543 44 35677889999999999999999876 34332 2233499999999999999984
|
| >2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00022 Score=73.08 Aligned_cols=106 Identities=12% Similarity=0.048 Sum_probs=69.0
Q ss_pred CcChHHHHHHHHHc----CC-CcEEeeccccC-CCC-CCCcccEEEecCcccccccChHHHHHHHhhcccCCcE-EEEec
Q 009719 163 RDSHKAQIQFALER----GI-PAFVAMLGTRR-LPF-PAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGY-LVISG 234 (527)
Q Consensus 163 ~D~seaqvq~A~eR----g~-pa~~~v~dae~-LPF-pD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~-lviS~ 234 (527)
.|.++.+++.|+++ |+ .+.+..+|+.. ||. .+++||+|+++..+++. . ...+|.++.|+|||||+ ++++.
T Consensus 201 vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~-~-~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 201 LDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPETLE-A-IRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp ECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCSSHH-H-HHHHHHHHHHTBCSTTCEEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCCchH-H-HHHHHHHHHHHcccCCeEEEEEE
Confidence 37788999988765 55 46677888877 885 57899999998655333 2 24599999999999994 46665
Q ss_pred CCCCCCCchhHHHHHHHHHH-hcceEEeeeecceEEEeC
Q 009719 235 PPVQWPKQDKEWADLQAVAR-ALCYELIAVDGNTVIWKK 272 (527)
Q Consensus 235 pp~~~~~~~~~w~~i~~l~~-~mcW~~~~~~~~v~iwrK 272 (527)
.. .......|..+.++.. .+.++......++..|..
T Consensus 279 ~~--~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 315 (373)
T 2qm3_A 279 TR--RESSLDKWREIQKLLLNEFNVVITDIIRNFNEYVN 315 (373)
T ss_dssp CT--TTCCHHHHHHHHHHHHHTSCCEEEEEEEEEEEBCC
T ss_pred ec--CcCCHHHHHHHHHHHHHhcCcchhhhhhhhhhhcc
Confidence 42 1122234556666655 555554443344444443
|
| >2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.67 E-value=1.1e-05 Score=73.74 Aligned_cols=139 Identities=14% Similarity=0.159 Sum_probs=75.4
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc-----cccccccccCCCCCCCC-CccchhhhcCcccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR-----GLIGVYHDWCEPFSTYP-RTYDLIHVSGIESL 447 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR-----GLiG~~hdwce~fstYP-rtyDLiHa~~~fs~ 447 (527)
.+|||+|||.|.++..|.+...- +|+-.|-. ..+..+-++ .+--+..|..+ ++ ++ .+||+|-+..+|..
T Consensus 44 ~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~-~~-~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 44 DRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRK-LD-FPSASFDVVLEKGTLDA 119 (215)
T ss_dssp CCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTS-CC-SCSSCEEEEEEESHHHH
T ss_pred CeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhc-CC-CCCCcccEEEECcchhh
Confidence 47999999999999988665321 22222222 333333332 11112223322 22 33 78999998887754
Q ss_pred ccCCCCC------CCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHH--HhcCCceeEEecCCCCCCCCceEEEEE
Q 009719 448 IKNPGSN------KNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRI--ANTVRWTAAVHDKEPGSNGREKILVAT 519 (527)
Q Consensus 448 ~~~~~~~------~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i--~~~l~W~~~~~~~e~~~~~~ekiLi~~ 519 (527)
....... .+.-....+|-|+-|+|+|||.+++.+-...- ..+.+ .....|+......+++. .-.+.+++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 196 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPH-FRTRHYAQAYYGWSLRHATYGSGF--HFHLYLMH 196 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHH-HHHHHHCCGGGCEEEEEEEESGGG--CEEEEEEE
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcH-HHHHHHhccccCcEEEEEEecCcc--eEEEEEEE
Confidence 3200000 00113468899999999999999998743211 11223 33456876554333222 22455565
Q ss_pred e
Q 009719 520 K 520 (527)
Q Consensus 520 K 520 (527)
|
T Consensus 197 ~ 197 (215)
T 2pxx_A 197 K 197 (215)
T ss_dssp E
T ss_pred e
Confidence 5
|
| >3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=97.65 E-value=5.4e-06 Score=77.65 Aligned_cols=96 Identities=17% Similarity=0.214 Sum_probs=60.7
Q ss_pred eeeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhhc-----cccccccccCCCCCCCCCccchhhhcCcc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYDR-----GLIGVYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~eR-----GLiG~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
=.+|||+|||.|.++.+|.+. ..-|.- .|-. ..+..+-++ .+--+..|.. .++ ++.+||+|.+..++
T Consensus 45 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~---vD~s~~~~~~a~~~~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~l 119 (234)
T 3dtn_A 45 NPDILDLGAGTGLLSAFLMEKYPEATFTL---VDMSEKMLEIAKNRFRGNLKVKYIEADYS-KYD-FEEKYDMVVSALSI 119 (234)
T ss_dssp SCEEEEETCTTSHHHHHHHHHCTTCEEEE---EESCHHHHHHHHHHTCSCTTEEEEESCTT-TCC-CCSCEEEEEEESCG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCeEEE---EECCHHHHHHHHHhhccCCCEEEEeCchh-ccC-CCCCceEEEEeCcc
Confidence 368999999999999988655 332222 2222 344444433 1111222222 222 34899999999888
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
..+. + -....+|-|+-|+|+|||.+++.+
T Consensus 120 ~~~~------~-~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 120 HHLE------D-EDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp GGSC------H-HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCC------H-HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 7653 1 111248999999999999999976
|
| >3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi} | Back alignment and structure |
|---|
Probab=97.65 E-value=5.6e-05 Score=68.63 Aligned_cols=133 Identities=11% Similarity=0.032 Sum_probs=80.5
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccccccccccCCCCCCCCCccchhhhcCccccccCCCCC
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSN 454 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~ 454 (527)
.|||+|||.|.++.+|.... +|+-+|-. ..+.. ...+--+..|..+++. +.+||+|-++..|....++...
T Consensus 26 ~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~--~~~~~~~~~d~~~~~~--~~~fD~i~~n~~~~~~~~~~~~ 97 (170)
T 3q87_B 26 IVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES--HRGGNLVRADLLCSIN--QESVDVVVFNPPYVPDTDDPII 97 (170)
T ss_dssp EEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT--CSSSCEEECSTTTTBC--GGGCSEEEECCCCBTTCCCTTT
T ss_pred eEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc--ccCCeEEECChhhhcc--cCCCCEEEECCCCccCCccccc
Confidence 89999999999999998876 55545443 33333 2222223334444332 2899999998776643210000
Q ss_pred CCCCcccccceeecccccCCcEEEEeC-CHHHHHHHHHHHhcCCceeEEecCCCCCCCCceEEEEE
Q 009719 455 KNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVAT 519 (527)
Q Consensus 455 ~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~ 519 (527)
........++-++=|.| |||.+++.. .....+++.++++...|+.......... .|++++.+
T Consensus 98 ~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~~~--~e~~~~~~ 160 (170)
T 3q87_B 98 GGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKIL--GETVYIIK 160 (170)
T ss_dssp BCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEECS--SSEEEEEE
T ss_pred cCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeeccC--CceEEEEE
Confidence 01112234555666666 999999975 3345677888888888887655333222 45666554
|
| >3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.63 E-value=7.6e-05 Score=72.00 Aligned_cols=92 Identities=12% Similarity=0.113 Sum_probs=61.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCC--CCCCcccEEEecCccccc-----
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLP--FPAFSFDIVHCSRCLIPF----- 209 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LP--FpD~SFDlV~cs~~l~hw----- 209 (527)
.|.++..|..++.. .+...|.++.+++.|+++ ++. +.+..+|...++ +++++||+|+|+-...+.
T Consensus 60 ~G~~~~~la~~~~~--~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~ 137 (259)
T 3lpm_A 60 NGIIPLLLSTRTKA--KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSL 137 (259)
T ss_dssp TTHHHHHHHTTCCC--EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC--------
T ss_pred hhHHHHHHHHhcCC--cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCCCCCCccccC
Confidence 44455555555432 344447788888888764 443 567778887775 678999999996433221
Q ss_pred c--------------cChHHHHHHHhhcccCCcEEEEecCC
Q 009719 210 T--------------AYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 210 ~--------------d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
. .....++.++.|+|||||+|++..++
T Consensus 138 ~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 178 (259)
T 3lpm_A 138 KNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP 178 (259)
T ss_dssp ---------------HHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred CCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH
Confidence 0 01124899999999999999997764
|
| >3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=97.63 E-value=4.4e-05 Score=77.13 Aligned_cols=129 Identities=16% Similarity=0.130 Sum_probs=81.1
Q ss_pred eeEeecCCCccchhhhccCCCe-eEEEecCCCC-CCchhHhhhc--ccc---c-cccccCCCCCCCC-CccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPV-WVMNVVPARK-SSTLSVIYDR--GLI---G-VYHDWCEPFSTYP-RTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~-~ntl~vi~eR--GLi---G-~~hdwce~fstYP-rtyDLiHa~~~f 445 (527)
++|||+|||+|+|+..|...+. -| +-+|- +++|.....+ .++ . -..... ....| .+||++-++-.|
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~ga~~V---~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~--~~~l~~~~fD~v~~d~sf 161 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNGAKLV---YAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAE--PVDFTEGLPSFASIDVSF 161 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEE---EEECSSSSCSCHHHHTCTTEEEECSCCGGGCC--GGGCTTCCCSEEEECCSS
T ss_pred cEEEecCCCccHHHHHHHhCCCCEE---EEEECCHHHHHHHHHhCcccceecccCceecc--hhhCCCCCCCEEEEEeeH
Confidence 5899999999999988876643 23 33343 3666553331 111 0 011111 11234 459999998777
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC----------------------CHHHHHHHHHHHhcCCceeEEe
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD----------------------SPEVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird----------------------~~~~~~~i~~i~~~l~W~~~~~ 503 (527)
.. +..+|-|+-|+|+|||.+++-- ....++++.+++...-|.+...
T Consensus 162 ~s------------l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~ 229 (291)
T 3hp7_A 162 IS------------LNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGL 229 (291)
T ss_dssp SC------------GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred hh------------HHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 63 3679999999999999998851 0136778888888999987644
Q ss_pred cC--CCCCCC-CceEEEEEe
Q 009719 504 DK--EPGSNG-REKILVATK 520 (527)
Q Consensus 504 ~~--e~~~~~-~ekiLi~~K 520 (527)
.. ..|+.+ .|-++.++|
T Consensus 230 ~~spi~g~~gn~e~l~~~~~ 249 (291)
T 3hp7_A 230 DFSPIQGGHGNIEFLAHLEK 249 (291)
T ss_dssp EECSSCCGGGCCCEEEEEEE
T ss_pred EECCCCCCCcCHHHHHHhhh
Confidence 32 224443 455665655
|
| >1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.61 E-value=1.7e-05 Score=69.96 Aligned_cols=89 Identities=20% Similarity=0.202 Sum_probs=60.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccC-CCC-C--CCcccEEEecCcccccccChH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRR-LPF-P--AFSFDIVHCSRCLIPFTAYNA 214 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~-LPF-p--D~SFDlV~cs~~l~hw~d~~~ 214 (527)
.|.++.+|..++.. +...|.++.+++.|+++ +..+.+..+|+.. ++. + +++||+|++...++ .....
T Consensus 52 ~G~~~~~l~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~--~~~~~ 126 (171)
T 1ws6_A 52 SGAVGLEAASEGWE---AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPYA--MDLAA 126 (171)
T ss_dssp SCHHHHHHHHTTCE---EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCTT--SCTTH
T ss_pred cCHHHHHHHHCCCe---EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCCc--hhHHH
Confidence 44555556666554 33447788899888764 3456677777655 442 2 34899999987653 33333
Q ss_pred HHHHHHh--hcccCCcEEEEecCCC
Q 009719 215 TYLIEVD--RLLRPGGYLVISGPPV 237 (527)
Q Consensus 215 ~aL~Ei~--RVLRPGG~lviS~pp~ 237 (527)
++.++. |+|||||+++++.++.
T Consensus 127 -~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 127 -LFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp -HHHHHHHHTCEEEEEEEEEEEETT
T ss_pred -HHHHHHhhcccCCCcEEEEEeCCc
Confidence 777777 9999999999988743
|
| >3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.61 E-value=9.2e-06 Score=79.64 Aligned_cols=94 Identities=10% Similarity=0.046 Sum_probs=60.9
Q ss_pred CeeeEeecCCCccchhhhcc---CCCeeEEEecCCCCCCchhHhhhc-----cccc---c-ccccCCCCCCCC------C
Q 009719 373 AIRNIMDMNAFFGGFAAALT---SDPVWVMNVVPARKSSTLSVIYDR-----GLIG---V-YHDWCEPFSTYP------R 434 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~---~~~VwvMnvvp~~~~ntl~vi~eR-----GLiG---~-~hdwce~fstYP------r 434 (527)
.-.+|||+|||.|.++..|. ....-|.-|=+. +..+..+-++ |... . ..|.. .++.-. .
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLS--ATMIKTAEVIKEGSPDTYKNVSFKISSSD-DFKFLGADSVDKQ 112 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESC--HHHHHHHHHHHHHCC-CCTTEEEEECCTT-CCGGGCTTTTTSS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCC--HHHHHHHHHHHHhccCCCCceEEEEcCHH-hCCccccccccCC
Confidence 45789999999999999998 444433333221 2444544443 2211 1 12222 222112 6
Q ss_pred ccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEE
Q 009719 435 TYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVV 479 (527)
Q Consensus 435 tyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~ii 479 (527)
+||+|++..++.. - +...+|-|+-|+|||||.+++
T Consensus 113 ~fD~V~~~~~l~~---------~-~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 113 KIDMITAVECAHW---------F-DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CEEEEEEESCGGG---------S-CHHHHHHHHHHHEEEEEEEEE
T ss_pred CeeEEeHhhHHHH---------h-CHHHHHHHHHHhcCCCcEEEE
Confidence 9999999887763 2 567899999999999999998
|
| >3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=3.1e-05 Score=79.19 Aligned_cols=67 Identities=13% Similarity=-0.054 Sum_probs=52.6
Q ss_pred cChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChH-HHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA-TYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~-~aL~Ei~RVLRPGG~lviS~p 235 (527)
|. +.+++.|+++ ..+.+..+|... |+|++ |+|+++.++|||.+... .+|+++.|+|||||+|++...
T Consensus 234 D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 234 DL-PHVIQDAPAF-SGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp EC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred eh-HHHHHhhhhc-CCCEEEecCCCC-CCCCC--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 55 5677666543 235677788766 88865 99999999999987653 589999999999999999764
|
| >3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A | Back alignment and structure |
|---|
Probab=97.60 E-value=4.9e-05 Score=70.54 Aligned_cols=119 Identities=14% Similarity=0.165 Sum_probs=72.8
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhc----cc-------cc-cccccCCCCCCCCCccchhh
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDR----GL-------IG-VYHDWCEPFSTYPRTYDLIH 440 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eR----GL-------iG-~~hdwce~fstYPrtyDLiH 440 (527)
.+|||+|||.|.|+.+|.+. +.. +|+-+|-. ..+..+-++ |+ +- +..|. +..+.-+.+||+|-
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLKDSFFE--QITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL-TYQDKRFHGYDAAT 107 (217)
T ss_dssp CEEEEETCTTCHHHHHHHHCTTCS--EEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT-TSCCGGGCSCSEEE
T ss_pred CEEEEeCCCCCHHHHHHHhhCCCC--EEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc-ccccccCCCcCEEe
Confidence 58999999999999999764 211 22222322 444444433 21 11 11122 11111126899999
Q ss_pred hcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHHH----------------------HHH----HHHHHh
Q 009719 441 VSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEV----------------------IDK----VSRIAN 494 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~----------------------~~~----i~~i~~ 494 (527)
+..++..+. .-.+..+|-|+-|+|+|||.+++.+..+. -++ ++++++
T Consensus 108 ~~~~l~~~~-------~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (217)
T 3jwh_A 108 VIEVIEHLD-------LSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITE 180 (217)
T ss_dssp EESCGGGCC-------HHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHH
T ss_pred eHHHHHcCC-------HHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHH
Confidence 998887653 22345788899999999998888754321 122 337777
Q ss_pred cCCceeEEe
Q 009719 495 TVRWTAAVH 503 (527)
Q Consensus 495 ~l~W~~~~~ 503 (527)
.--+++...
T Consensus 181 ~~Gf~v~~~ 189 (217)
T 3jwh_A 181 RFAYNVQFQ 189 (217)
T ss_dssp HSSEEEEEC
T ss_pred HcCceEEEE
Confidence 778877665
|
| >1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 | Back alignment and structure |
|---|
Probab=97.59 E-value=3.4e-05 Score=77.16 Aligned_cols=66 Identities=11% Similarity=0.041 Sum_probs=53.2
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCC
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
|.++.+++.|+++ |++ +.+..+|...++.++++||+|++..+++|.. .++.|+|||||+++++..+
T Consensus 107 D~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~~-------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 107 EYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVGVDEVP-------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp ESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSBBSCCC-------HHHHHHEEEEEEEEEEBCB
T ss_pred ECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEcCCHHHHH-------HHHHHhcCCCcEEEEEECC
Confidence 6678888888765 544 5677788888776788999999999987765 5788999999999998753
|
| >3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=1.5e-05 Score=84.37 Aligned_cols=95 Identities=20% Similarity=0.163 Sum_probs=64.0
Q ss_pred CeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCC------CCcccEEEecCcccccccChHHHHHHHhhcccCC
Q 009719 154 NILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFP------AFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPG 227 (527)
Q Consensus 154 ~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFp------D~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPG 227 (527)
.|+++++++. |. .....+.+.++|+..+||. +++||+|+|.. .+++.+. ..+|.|+.|+||||
T Consensus 249 ~V~GVDiSp~-----m~----~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~-~~aL~el~rvLKPG 317 (419)
T 3sso_A 249 QIYGLDIMDK-----SH----VDELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDG-SHINAHV-RTSFAALFPHVRPG 317 (419)
T ss_dssp EEEEEESSCC-----GG----GCBTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHH-HHHHHHHGGGEEEE
T ss_pred EEEEEECCHH-----Hh----hcCCCcEEEEecccccchhhhhhcccCCccEEEECC-cccchhH-HHHHHHHHHhcCCC
Confidence 4666666654 31 1233467888999999998 89999999874 4555443 45999999999999
Q ss_pred cEEEEecCC-CCCC---Cc-------hhHHHHHHHHHHhcceE
Q 009719 228 GYLVISGPP-VQWP---KQ-------DKEWADLQAVARALCYE 259 (527)
Q Consensus 228 G~lviS~pp-~~~~---~~-------~~~w~~i~~l~~~mcW~ 259 (527)
|+|++..-. .+|+ +. ...-+.++++.+.+.|.
T Consensus 318 GvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~~ 360 (419)
T 3sso_A 318 GLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQHQ 360 (419)
T ss_dssp EEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTGG
T ss_pred eEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHhccc
Confidence 999997532 2221 11 12345566666666653
|
| >3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=97.58 E-value=2.6e-05 Score=71.88 Aligned_cols=143 Identities=15% Similarity=0.125 Sum_probs=84.0
Q ss_pred cccCccccchhhHHHHHHHHHH-HHHhhhccCCCCeeeEeecCCCccchhhhccCCC--eeEEEecCCCCC-CchhHhhh
Q 009719 340 MKNGYDVFEADSRRWRRRVAYY-KNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDP--VWVMNVVPARKS-STLSVIYD 415 (527)
Q Consensus 340 ~g~~~~~f~~d~~~W~~~v~~Y-~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~--VwvMnvvp~~~~-ntl~vi~e 415 (527)
.|+..+.|..+...=++.+... .+.+. +.. -.+|||+|||.|.++..|.... .-| +-.|.. ..+..+-+
T Consensus 10 ~g~~d~~f~~~g~~~~~~i~~~~l~~l~--~~~--~~~vLDiG~G~G~~~~~la~~~~~~~v---~~vD~s~~~~~~a~~ 82 (204)
T 3e05_A 10 GIDDDEFATAKKLITKQEVRAVTLSKLR--LQD--DLVMWDIGAGSASVSIEASNLMPNGRI---FALERNPQYLGFIRD 82 (204)
T ss_dssp CCCGGGSCCCTTTSCCHHHHHHHHHHTT--CCT--TCEEEEETCTTCHHHHHHHHHCTTSEE---EEEECCHHHHHHHHH
T ss_pred CCCCcHHhccCCcCChHHHHHHHHHHcC--CCC--CCEEEEECCCCCHHHHHHHHHCCCCEE---EEEeCCHHHHHHHHH
Confidence 3555566766444422333221 12222 233 3589999999999998886542 222 222222 34444433
Q ss_pred c----cc--cc-cccccCCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-CHHHHH
Q 009719 416 R----GL--IG-VYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVID 487 (527)
Q Consensus 416 R----GL--iG-~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~ 487 (527)
+ |+ +- +..|..+.+.. ..+||+|-++..+. .+..++-++-|+|+|||.+++.. ..+...
T Consensus 83 ~~~~~~~~~v~~~~~d~~~~~~~-~~~~D~i~~~~~~~------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 149 (204)
T 3e05_A 83 NLKKFVARNVTLVEAFAPEGLDD-LPDPDRVFIGGSGG------------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLT 149 (204)
T ss_dssp HHHHHTCTTEEEEECCTTTTCTT-SCCCSEEEESCCTT------------CHHHHHHHHHHHCCTTCEEEEEECBHHHHH
T ss_pred HHHHhCCCcEEEEeCChhhhhhc-CCCCCEEEECCCCc------------CHHHHHHHHHHhcCCCeEEEEEecccccHH
Confidence 2 43 11 12233333322 25799987764332 34679999999999999999985 456777
Q ss_pred HHHHHHhcCCceeEE
Q 009719 488 KVSRIANTVRWTAAV 502 (527)
Q Consensus 488 ~i~~i~~~l~W~~~~ 502 (527)
++.++++...|++..
T Consensus 150 ~~~~~l~~~g~~~~~ 164 (204)
T 3e05_A 150 KAVEFLEDHGYMVEV 164 (204)
T ss_dssp HHHHHHHHTTCEEEE
T ss_pred HHHHHHHHCCCceeE
Confidence 888888888776443
|
| >2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.58 E-value=4.9e-05 Score=71.75 Aligned_cols=69 Identities=17% Similarity=0.214 Sum_probs=47.8
Q ss_pred cChHHH----HHHHHHcCCCcEEeeccccC---CCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCC
Q 009719 164 DSHKAQ----IQFALERGIPAFVAMLGTRR---LPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 164 D~seaq----vq~A~eRg~pa~~~v~dae~---LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
|.++.| ++.|.++ ..+.+..+|+.. +|+++++||+|+|... .++....++.++.|+|||||+++++..+
T Consensus 109 D~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 109 EFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFADVA---QPDQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp CCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEECCC---CTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred ECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEEcCC---CccHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 555444 4455544 345667777766 6778899999998644 1222233688999999999999997653
|
| >3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=3.8e-05 Score=78.54 Aligned_cols=67 Identities=18% Similarity=0.025 Sum_probs=52.8
Q ss_pred cChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|. +.+++.|+++ ..+.+..+|... |+|++ |+|+++.++|||.+.. ..+|+++.|+|||||+|++...
T Consensus 232 D~-~~~~~~a~~~-~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 232 DL-PHVISEAPQF-PGVTHVGGDMFK-EVPSG--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp EC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred cC-HHHHHhhhhc-CCeEEEeCCcCC-CCCCC--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 55 5667666543 246677788777 88865 9999999999998664 3599999999999999999764
|
| >2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=97.56 E-value=9.2e-06 Score=76.89 Aligned_cols=94 Identities=15% Similarity=0.103 Sum_probs=62.2
Q ss_pred CeeeEeecCCCccchhhhccCC----CeeEEEecCCCCCCchhHhhhcc--ccccccccCCCCCCCCCccchhhhcCccc
Q 009719 373 AIRNIMDMNAFFGGFAAALTSD----PVWVMNVVPARKSSTLSVIYDRG--LIGVYHDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~----~VwvMnvvp~~~~ntl~vi~eRG--LiG~~hdwce~fstYPrtyDLiHa~~~fs 446 (527)
.-.+|||+|||.|.++.+|.+. .|..+-+- +..+..+-++. +--...|. +.++ .+.+||+|++..++.
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s----~~~~~~a~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~ 106 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSD----DDMLEKAADRLPNTNFGKADL-ATWK-PAQKADLLYANAVFQ 106 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESC----HHHHHHHHHHSTTSEEEECCT-TTCC-CSSCEEEEEEESCGG
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECC----HHHHHHHHHhCCCcEEEECCh-hhcC-ccCCcCEEEEeCchh
Confidence 3468999999999999888654 23332221 24455554441 11112222 2333 358999999988877
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
... +...+|-|+-|+|+|||++++..
T Consensus 107 ~~~---------~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 107 WVP---------DHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp GST---------THHHHHHHHGGGEEEEEEEEEEE
T ss_pred hCC---------CHHHHHHHHHHhcCCCeEEEEEe
Confidence 542 35678999999999999999974
|
| >3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.55 E-value=1.5e-05 Score=74.43 Aligned_cols=97 Identities=18% Similarity=0.203 Sum_probs=63.4
Q ss_pred CeeeEeecCCCccchhhhccCCCe-eEEEecCCCCCCchhHhhhcc----ccccccccCCCCCCCCCccchhhhcCcccc
Q 009719 373 AIRNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKSSTLSVIYDRG----LIGVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~ntl~vi~eRG----LiG~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
.-.+|||+|||.|.++..|.+.+. -|.-|-+. +..+..+-++. +--+..|..+ ++.-+.+||+|.+..++..
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~ 119 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLS--EKMLARARAAGPDTGITYERADLDK-LHLPQDSFDLAYSSLALHY 119 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESC--HHHHHHHHHTSCSSSEEEEECCGGG-CCCCTTCEEEEEEESCGGG
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCC--HHHHHHHHHhcccCCceEEEcChhh-ccCCCCCceEEEEeccccc
Confidence 346899999999999999977654 23322221 24444444442 2112223222 3322479999999988775
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.. +...+|-|+-|+|+|||.+++..
T Consensus 120 ~~---------~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 120 VE---------DVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp CS---------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cc---------hHHHHHHHHHHhcCcCcEEEEEe
Confidence 42 35678999999999999999964
|
| >3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.55 E-value=4e-05 Score=78.91 Aligned_cols=118 Identities=17% Similarity=0.192 Sum_probs=69.0
Q ss_pred HHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCe-eEEEecCCCCCC-chhHhhhccc---cccccccCCCCCC
Q 009719 357 RVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKSS-TLSVIYDRGL---IGVYHDWCEPFST 431 (527)
Q Consensus 357 ~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~n-tl~vi~eRGL---iG~~hdwce~fst 431 (527)
+...|.+.|...+....=.+|||+|||.|.++..|.+... -|.-|=....-. ....+-+.|+ |-+++.=.+.+.
T Consensus 47 r~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 125 (376)
T 3r0q_C 47 RMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDIS- 125 (376)
T ss_dssp HHHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCC-
T ss_pred HHHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcC-
Confidence 4455776664333223336899999999999888876643 343443331111 1222333454 233332223332
Q ss_pred CCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 432 YPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 432 YPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+|..||+|.+..+..... ..-.+..++-+++|+|+|||.+|+..
T Consensus 126 ~~~~~D~Iv~~~~~~~l~------~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 126 LPEKVDVIISEWMGYFLL------RESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp CSSCEEEEEECCCBTTBT------TTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred cCCcceEEEEcChhhccc------chHHHHHHHHHHHhhCCCCeEEEEec
Confidence 568999999965333221 11235678889999999999998863
|
| >3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.55 E-value=4.8e-05 Score=78.33 Aligned_cols=87 Identities=11% Similarity=0.077 Sum_probs=57.8
Q ss_pred hccccccccCCe-eEEeeccCcChHHHHHHHHH----cCCC--cEEeeccccCCCCCCCcccEEEecCcccccc--cChH
Q 009719 144 ASFGGSMLSENI-LTLSFAPRDSHKAQIQFALE----RGIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFT--AYNA 214 (527)
Q Consensus 144 gsfga~Ll~r~V-~~msiAp~D~seaqvq~A~e----Rg~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~--d~~~ 214 (527)
|.++..+..++. .+..+ |.+ .|++.|++ .++. +.+..++++.++++ ++||+|+|....+... ....
T Consensus 75 G~ls~~la~~g~~~V~gv---D~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~~~l~~e~~~~ 149 (376)
T 3r0q_C 75 GILAIWSAQAGARKVYAV---EAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMGYFLLRESMFD 149 (376)
T ss_dssp THHHHHHHHTTCSEEEEE---ESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCBTTBTTTCTHH
T ss_pred CHHHHHHHhcCCCEEEEE---ccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChhhcccchHHHH
Confidence 334444555554 33333 455 56666654 3554 57788999999998 9999999965432222 2334
Q ss_pred HHHHHHhhcccCCcEEEEecC
Q 009719 215 TYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 215 ~aL~Ei~RVLRPGG~lviS~p 235 (527)
.++.++.|+|||||+++++..
T Consensus 150 ~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 150 SVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp HHHHHHHHHEEEEEEEESSEE
T ss_pred HHHHHHHhhCCCCeEEEEecC
Confidence 489999999999999988653
|
| >3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=97.55 E-value=5.7e-05 Score=75.67 Aligned_cols=68 Identities=21% Similarity=0.193 Sum_probs=51.3
Q ss_pred HHHHHHHHc----CCC--cEEeeccccCCC-CCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 168 AQIQFALER----GIP--AFVAMLGTRRLP-FPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 168 aqvq~A~eR----g~p--a~~~v~dae~LP-FpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+++.|+++ ++. +.+..+|....+ ++.+.||+|+|+.++|||.+.. ..+|+++.|+|||||+|++..+
T Consensus 213 ~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (352)
T 3mcz_A 213 TTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTM 288 (352)
T ss_dssp GGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 455555543 443 567778877766 3456799999999999997652 3599999999999999999764
|
| >4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00015 Score=75.01 Aligned_cols=121 Identities=15% Similarity=0.080 Sum_probs=75.7
Q ss_pred hhccccccccC--CeeEEeeccCcChHHHHHHHHHc----CCC----cEEeeccccCCCCCCCcccEEEecCccccc---
Q 009719 143 VASFGGSMLSE--NILTLSFAPRDSHKAQIQFALER----GIP----AFVAMLGTRRLPFPAFSFDIVHCSRCLIPF--- 209 (527)
Q Consensus 143 vgsfga~Ll~r--~V~~msiAp~D~seaqvq~A~eR----g~p----a~~~v~dae~LPFpD~SFDlV~cs~~l~hw--- 209 (527)
.|.++..+..+ +..+. ..|.++.+++.|+++ ++. +.+..+|... ++++++||+|+|.-.+++-
T Consensus 233 ~G~~s~~la~~~p~~~V~---gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~nppfh~~~~~ 308 (375)
T 4dcm_A 233 NGVIGLTLLDKNPQAKVV---FVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNPPFHQQHAL 308 (375)
T ss_dssp TCHHHHHHHHHCTTCEEE---EEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEECCCC------
T ss_pred chHHHHHHHHHCCCCEEE---EEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEECCCcccCccc
Confidence 44455555554 33333 337788888888764 432 4456677665 7888999999999876542
Q ss_pred ccCh-HHHHHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeeeecceEEEeCCC
Q 009719 210 TAYN-ATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKKPV 274 (527)
Q Consensus 210 ~d~~-~~aL~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~~~~v~iwrKp~ 274 (527)
.+.. ..+|.++.|+|||||+++++.+.. ..+.. .++++.. ..+.+.+.....|++-.-
T Consensus 309 ~~~~~~~~l~~~~~~LkpgG~l~iv~n~~---~~~~~--~l~~~fg--~~~~~a~~~~F~V~~~~~ 367 (375)
T 4dcm_A 309 TDNVAWEMFHHARRCLKINGELYIVANRH---LDYFH--KLKKIFG--NCTTIATNNKFVVLKAVK 367 (375)
T ss_dssp -CCHHHHHHHHHHHHEEEEEEEEEEEETT---SCHHH--HHHHHHS--CCEEEEECSSEEEEEEEC
T ss_pred CHHHHHHHHHHHHHhCCCCcEEEEEEECC---cCHHH--HHHHhcC--CEEEEeeCCCEEEEEEcC
Confidence 1221 137999999999999999987521 12222 2333322 356777778888887543
|
| >2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=97.54 E-value=9.5e-05 Score=69.57 Aligned_cols=84 Identities=11% Similarity=0.003 Sum_probs=58.5
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
.|.++..|..++.. +...|.++.+++.|+++ ++ ...+..+|.....+++++||+|++. .++... +
T Consensus 102 ~G~~~~~l~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~-----~~~~~~-~ 172 (248)
T 2yvl_A 102 SGALLAVLSEVAGE---VWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVD-----VREPWH-Y 172 (248)
T ss_dssp TSHHHHHHHHHSSE---EEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEEC-----SSCGGG-G
T ss_pred ccHHHHHHHHhCCE---EEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEEC-----CcCHHH-H
Confidence 34444455554333 33347788899888765 43 3456667776654478899999973 233334 8
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
+.++.|+|||||++++..+
T Consensus 173 l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 173 LEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp HHHHHHHBCTTCEEEEEES
T ss_pred HHHHHHHcCCCCEEEEEeC
Confidence 9999999999999999987
|
| >1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A | Back alignment and structure |
|---|
Probab=97.54 E-value=7.7e-05 Score=70.55 Aligned_cols=64 Identities=13% Similarity=0.143 Sum_probs=48.4
Q ss_pred cChHHHHHHHHHcC---CCcEEeeccccC----CCCCCCcccEEEecCcccccccCh--HHHHHHHhhcccCCcEEEEe
Q 009719 164 DSHKAQIQFALERG---IPAFVAMLGTRR----LPFPAFSFDIVHCSRCLIPFTAYN--ATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 164 D~seaqvq~A~eRg---~pa~~~v~dae~----LPFpD~SFDlV~cs~~l~hw~d~~--~~aL~Ei~RVLRPGG~lviS 233 (527)
|.++.+++.|+++. ..+.+..+|+.. +|++ ++||+|++ +..+.. ..+|.++.|+|||||+++++
T Consensus 105 D~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~-----~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 105 EYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIYE-----DVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp ESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEEE-----CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEEE-----ecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 77788888887653 234566778877 8888 89999992 333431 34799999999999999995
|
| >1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=3.9e-05 Score=71.69 Aligned_cols=67 Identities=16% Similarity=0.166 Sum_probs=51.9
Q ss_pred cChHHHHHHHHHc----CC------CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEe
Q 009719 164 DSHKAQIQFALER----GI------PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 164 D~seaqvq~A~eR----g~------pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS 233 (527)
|.++.+++.|+++ +. .+.+..+|....++++++||+|++...+.+ ++.++.|+|||||+++++
T Consensus 109 D~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~-------~~~~~~~~LkpgG~lv~~ 181 (226)
T 1i1n_A 109 DHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPV-------VPQALIDQLKPGGRLILP 181 (226)
T ss_dssp ESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEEECSBBSS-------CCHHHHHTEEEEEEEEEE
T ss_pred eCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEEECCchHH-------HHHHHHHhcCCCcEEEEE
Confidence 6677888877654 21 356677888777777889999999987755 456889999999999998
Q ss_pred cCCC
Q 009719 234 GPPV 237 (527)
Q Consensus 234 ~pp~ 237 (527)
.++.
T Consensus 182 ~~~~ 185 (226)
T 1i1n_A 182 VGPA 185 (226)
T ss_dssp ESCT
T ss_pred EecC
Confidence 8743
|
| >3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00012 Score=70.87 Aligned_cols=131 Identities=15% Similarity=0.156 Sum_probs=76.2
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCC-CCchhHhhhccc-cc-----cccccC-CCCCCCCCccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARK-SSTLSVIYDRGL-IG-----VYHDWC-EPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~-~ntl~vi~eRGL-iG-----~~hdwc-e~fstYPrtyDLiHa~~~fs 446 (527)
.+|||+|||+|+|+..|.+...- .|+-+|- ++.|.....+.- ++ -....+ +.++. .-||.+-++-+|+
T Consensus 39 ~~VLDiGcGtG~~t~~la~~g~~--~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~D~v~~ 114 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQNGAK--LVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ--GRPSFTSIDVSFI 114 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCS--EEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS--CCCSEEEECCSSS
T ss_pred CEEEEEccCCCHHHHHHHhcCCC--EEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc--CCCCEEEEEEEhh
Confidence 47999999999999888776531 2333332 245554443211 11 011111 22221 0135444444454
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeC-------------------C---HHHHHHHHHHHhcCCceeEEec
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-------------------S---PEVIDKVSRIANTVRWTAAVHD 504 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-------------------~---~~~~~~i~~i~~~l~W~~~~~~ 504 (527)
. +..+|-|+-|+|+|||.+++-- . ...++++.+++...-|++...+
T Consensus 115 ~------------l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~ 182 (232)
T 3opn_A 115 S------------LDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLT 182 (232)
T ss_dssp C------------GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred h------------HHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEE
Confidence 2 3669999999999999998851 1 1246678888888888876553
Q ss_pred CCC--CCC-CCceEEEEEec
Q 009719 505 KEP--GSN-GREKILVATKS 521 (527)
Q Consensus 505 ~e~--~~~-~~ekiLi~~K~ 521 (527)
..+ ++. ..|-++.++|.
T Consensus 183 ~~pi~g~~gn~e~l~~~~~~ 202 (232)
T 3opn_A 183 FSPIKGGAGNVEFLVHLLKD 202 (232)
T ss_dssp ECSSCBTTTBCCEEEEEEES
T ss_pred EccCCCCCCCHHHHHHHhhc
Confidence 322 222 35667777773
|
| >1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3 | Back alignment and structure |
|---|
Probab=97.53 E-value=3.3e-05 Score=73.13 Aligned_cols=129 Identities=18% Similarity=0.228 Sum_probs=67.6
Q ss_pred eeEeecCCCccchhhhccCC--CeeEEEecCCCCC-C----chhHhhhc-cccccccccCCC--CCCCCCccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-S----TLSVIYDR-GLIGVYHDWCEP--FSTYPRTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-n----tl~vi~eR-GLiG~~hdwce~--fstYPrtyDLiHa~~~ 444 (527)
.+|||+|||.|.++..|.+. .--|.-| |-. . .+..+-.+ ++.-+..|-.++ +..++.+||+|-++-
T Consensus 59 ~~VLDlGcGtG~~~~~la~~~~~~~V~gv---D~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~- 134 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADIVDEGIIYAV---EYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDI- 134 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHHTTTSEEEEE---CCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECC-
T ss_pred CEEEEECCcCCHHHHHHHHHcCCCEEEEE---ECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEec-
Confidence 37999999999998876432 1222222 222 1 11222222 222233343332 122458899998861
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEeC---------CHHHH--HHHHHHHhcCCceeE-EecCCCCCCCC
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD---------SPEVI--DKVSRIANTVRWTAA-VHDKEPGSNGR 512 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird---------~~~~~--~~i~~i~~~l~W~~~-~~~~e~~~~~~ 512 (527)
. +.=....+|-|+-|+|||||.+++.- +.+.+ ..++.+.+. +++. ..+.++.. ..
T Consensus 135 -~---------~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~--f~~~~~~~~~p~~-~~ 201 (210)
T 1nt2_A 135 -A---------QKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD--FKIVKHGSLMPYH-RD 201 (210)
T ss_dssp -C---------STTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT--SEEEEEEECTTTC-TT
T ss_pred -c---------ChhHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh--cEEeeeecCCCCC-CC
Confidence 1 11112345789999999999999862 12222 345555555 6654 33444322 12
Q ss_pred ceEEEEEe
Q 009719 513 EKILVATK 520 (527)
Q Consensus 513 ekiLi~~K 520 (527)
--+++++|
T Consensus 202 h~~~~~~~ 209 (210)
T 1nt2_A 202 HIFIHAYR 209 (210)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEEc
Confidence 33455554
|
| >2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.53 E-value=3.7e-05 Score=68.93 Aligned_cols=90 Identities=14% Similarity=0.085 Sum_probs=58.8
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccC----CCCCCCcccEEEecCcccccccC
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRR----LPFPAFSFDIVHCSRCLIPFTAY 212 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~----LPFpD~SFDlV~cs~~l~hw~d~ 212 (527)
.|.++.+++.++.. .+...|.++.+++.|+++ ++. +.+..+|+.. +|+++++||+|++...+ +....
T Consensus 55 ~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~-~~~~~ 131 (187)
T 2fhp_A 55 SGGLAIEAVSRGMD--KSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPY-AKQEI 131 (187)
T ss_dssp TCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCG-GGCCH
T ss_pred cCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCC-CchhH
Confidence 34444445555421 233336778888888754 442 5667777654 34558899999998764 33333
Q ss_pred hHHHHHHH--hhcccCCcEEEEecCC
Q 009719 213 NATYLIEV--DRLLRPGGYLVISGPP 236 (527)
Q Consensus 213 ~~~aL~Ei--~RVLRPGG~lviS~pp 236 (527)
. ..+.++ .|+|||||+++++.+.
T Consensus 132 ~-~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 132 V-SQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp H-HHHHHHHHTTCEEEEEEEEEEEET
T ss_pred H-HHHHHHHHhcccCCCCEEEEEeCC
Confidence 3 377777 9999999999998764
|
| >2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=2.8e-05 Score=75.48 Aligned_cols=112 Identities=13% Similarity=0.096 Sum_probs=72.4
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc-ccccc-ccCCCCCCCCCccchhhhcCcccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL-IGVYH-DWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL-iG~~h-dwce~fstYPrtyDLiHa~~~fs~ 447 (527)
.+|||+|||.|.++.++.+... +|+-.|-. ..+..+-++ |+ +-+++ |+.+.++ +..||+|.++.++..
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~--~~~fD~Vv~n~~~~~ 196 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALP--FGPFDLLVANLYAEL 196 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGG--GCCEEEEEEECCHHH
T ss_pred CEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCc--CCCCCEEEECCcHHH
Confidence 5899999999999888866543 33333332 444444432 33 22221 2222221 368999998754432
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeCC-HHHHHHHHHHHhcCCceeEEe
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-PEVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-~~~~~~i~~i~~~l~W~~~~~ 503 (527)
+..++-++-|+|+|||++++.+- .+..+.+.+.++..-++....
T Consensus 197 ------------~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~ 241 (254)
T 2nxc_A 197 ------------HAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEE 241 (254)
T ss_dssp ------------HHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEE
T ss_pred ------------HHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEE
Confidence 35688899999999999999863 334677788877777876544
|
| >3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=4.1e-05 Score=81.43 Aligned_cols=55 Identities=13% Similarity=0.018 Sum_probs=44.6
Q ss_pred CcEEeeccccCCCCCC--CcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 179 PAFVAMLGTRRLPFPA--FSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 179 pa~~~v~dae~LPFpD--~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+.+.++|...+||++ .+||+|++.-.+ ++++... .|.|+.|+|||||+|+++.+
T Consensus 233 rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~-aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 233 EYTLERGDFLSEEWRERIANTSVIFVNNFA-FGPEVDH-QLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp EEEEEECCTTSHHHHHHHHTCSEEEECCTT-CCHHHHH-HHHHHHTTSCTTCEEEESSC
T ss_pred CeEEEECcccCCccccccCCccEEEEcccc-cCchHHH-HHHHHHHcCCCCcEEEEeec
Confidence 4678889999999976 589999987544 5554444 89999999999999999865
|
| >3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.50 E-value=9.7e-05 Score=71.14 Aligned_cols=68 Identities=19% Similarity=0.182 Sum_probs=49.7
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccC-CCCCC--CcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRR-LPFPA--FSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~-LPFpD--~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++.+++.|+++ |+. +.+.++|+.. +|..+ ++||+|++... ..+. ..+|.++.|+|||||++++..
T Consensus 95 D~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d~~---~~~~-~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 95 EADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFIDAD---KPNN-PHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp ECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEECSC---GGGH-HHHHHHHHHTCCTTCEEEEEC
T ss_pred ECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEECCc---hHHH-HHHHHHHHHhcCCCeEEEEeC
Confidence 6778888888765 554 5677788755 56543 49999998643 2222 349999999999999999976
Q ss_pred C
Q 009719 235 P 235 (527)
Q Consensus 235 p 235 (527)
.
T Consensus 171 ~ 171 (248)
T 3tfw_A 171 V 171 (248)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.50 E-value=9.1e-05 Score=71.43 Aligned_cols=126 Identities=16% Similarity=0.148 Sum_probs=77.5
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc---cccc-cccCCCCCCC-CCccchhhhcC
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL---IGVY-HDWCEPFSTY-PRTYDLIHVSG 443 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL---iG~~-hdwce~fstY-PrtyDLiHa~~ 443 (527)
=.+|||+|||.|.++..|....-. +|+-+|-. ..+..+-+ .|+ +-++ .|..+....+ +.+||+|-++-
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~--~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKA--KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCC--EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCEEEEcCCchhHHHHHHHHhcCC--cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 358999999999999988776432 44444433 33333322 243 2222 2333322224 47999999975
Q ss_pred ccccc-----cCC------CCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCceeE
Q 009719 444 IESLI-----KNP------GSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAA 501 (527)
Q Consensus 444 ~fs~~-----~~~------~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~~ 501 (527)
-|... ..+ ......+.+..++-++-|+|+|||.+++--..+.+.++...++...|+..
T Consensus 128 Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~ 196 (259)
T 3lpm_A 128 PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPK 196 (259)
T ss_dssp CC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEE
T ss_pred CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCceE
Confidence 54321 000 00011255678999999999999999997666677778888888888764
|
| >3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=1.1e-05 Score=77.30 Aligned_cols=101 Identities=12% Similarity=0.111 Sum_probs=62.2
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc----c-c-ccccccCCCCCCCC-CccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG----L-I-GVYHDWCEPFSTYP-RTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG----L-i-G~~hdwce~fstYP-rtyDLiHa~~~fs 446 (527)
..|||+|||.|.++.+|.+...- +|+=++.+ ..+..+-+++ + + =+..||.+-...+| .+||.|..+...+
T Consensus 62 ~rVLdiG~G~G~~~~~~~~~~~~--~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~ 139 (236)
T 3orh_A 62 GRVLEVGFGMAIAASKVQEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp EEEEEECCTTSHHHHHHTTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CeEEEECCCccHHHHHHHHhCCc--EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeeec
Confidence 46999999999999999776431 22222322 5555554433 1 1 12234433333345 7899997765555
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.+. ..+.=+.+.++=|+-|+|||||.+++-+
T Consensus 140 ~~~----~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 140 SEE----TWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp BGG----GTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ccc----hhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 432 1111234578889999999999999853
|
| >3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=1.5e-05 Score=78.08 Aligned_cols=95 Identities=16% Similarity=0.152 Sum_probs=60.4
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc-----c-ccccccCCCCCCCCCccchhhhcCc
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL-----I-GVYHDWCEPFSTYPRTYDLIHVSGI 444 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL-----i-G~~hdwce~fstYPrtyDLiHa~~~ 444 (527)
.|||+|||.|.++.+|.+...- |+-+|-. ..+..+-++ |+ + =+..|.. .++ ++.+||+|.+...
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~-~~~-~~~~fD~v~~~~~ 159 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGWE---VTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMS-AFA-LDKRFGTVVISSG 159 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTCC---EEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTT-BCC-CSCCEEEEEECHH
T ss_pred cEEEEeccCCHHHHHHHHcCCe---EEEEECCHHHHHHHHHHHhhcccccccceEEEeCchh-cCC-cCCCcCEEEECCc
Confidence 8999999999999999887543 3333332 444444443 11 1 1222322 233 3789999886533
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.-.+. +.-....+|-|+-|+|||||.+++..
T Consensus 160 ~~~~~------~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 160 SINEL------DEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp HHTTS------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccC------CHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 22222 22234678999999999999999974
|
| >1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00025 Score=68.83 Aligned_cols=65 Identities=14% Similarity=0.178 Sum_probs=50.7
Q ss_pred cChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++.+++.|+++ ++ ...+..+|.... +++++||+|++. .++... +|.++.|+|||||++++..+
T Consensus 144 D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~-----~~~~~~-~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 144 EKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFLD-----VPDPWN-YIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp CCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEEC-----CSCGGG-THHHHHHHEEEEEEEEEEES
T ss_pred ECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEEC-----CcCHHH-HHHHHHHHcCCCCEEEEEeC
Confidence 7778888888765 54 345667777666 788899999973 334334 99999999999999999887
|
| >2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.48 E-value=3.2e-05 Score=69.41 Aligned_cols=90 Identities=9% Similarity=0.038 Sum_probs=60.2
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccC-CCCCCCcccEEEecCcccccccChHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAYNAT 215 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~~~~ 215 (527)
.|.++..+..++.. .+...|.++.+++.|+++ ++. +.+..+|+.. ++..+++||+|++...+ +..... .
T Consensus 42 ~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~-~~~~~~-~ 117 (177)
T 2esr_A 42 SGGLAIEAVSRGMS--AAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPY-AKETIV-A 117 (177)
T ss_dssp TCHHHHHHHHTTCC--EEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSS-HHHHHH-H
T ss_pred CCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCC-CcchHH-H
Confidence 45555556665431 333447788999988764 333 5566777666 56666789999998654 222222 3
Q ss_pred HHHHHh--hcccCCcEEEEecCC
Q 009719 216 YLIEVD--RLLRPGGYLVISGPP 236 (527)
Q Consensus 216 aL~Ei~--RVLRPGG~lviS~pp 236 (527)
.+.++. |+|||||+++++.+.
T Consensus 118 ~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 118 TIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp HHHHHHHTTCEEEEEEEEEEEET
T ss_pred HHHHHHhCCCcCCCcEEEEEECC
Confidence 677776 999999999998764
|
| >1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20 | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00015 Score=66.53 Aligned_cols=67 Identities=13% Similarity=0.055 Sum_probs=50.4
Q ss_pred CcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 163 RDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 163 ~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.|.++.+++.|+++ +++ +.+..++...++ ++++||+|+|.. +.+ ...++.++.|+|||||++++...
T Consensus 95 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~-~~~----~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 95 LDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRA-FAS----LNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp EESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSC-SSS----HHHHHHHHTTSEEEEEEEEEEES
T ss_pred EeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEec-cCC----HHHHHHHHHHhcCCCcEEEEEeC
Confidence 36677888888754 554 566778887776 578999999753 322 23499999999999999999754
|
| >2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=9.2e-05 Score=71.24 Aligned_cols=132 Identities=13% Similarity=0.089 Sum_probs=72.0
Q ss_pred eeEeecCCCccchhhhccCC------C--eeEEEecCCCCCCchhHhhhccccccccccCCC--CCCCCC-ccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTSD------P--VWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEP--FSTYPR-TYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~------~--VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwce~--fstYPr-tyDLiHa~~ 443 (527)
.+|||+|||.|++++.|.+. . |..+-+-|.-. .... -+...+-=+..|..+. ++..+. +||+|+++.
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l-~~a~-~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRC-QIPA-SDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTC-CCCG-GGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHH-HHHh-ccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 48999999999999988543 2 44444333321 1111 0011111122343332 222222 699998753
Q ss_pred ccccccCCCCCCCCCcccccceeecc-cccCCcEEEEeCCHH-----HHHHHHHHHhcC--CceeEEecCCCCCCCCceE
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDR-MLRPEGTVVVRDSPE-----VIDKVSRIANTV--RWTAAVHDKEPGSNGREKI 515 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDR-ILRP~G~~iird~~~-----~~~~i~~i~~~l--~W~~~~~~~e~~~~~~eki 515 (527)
. + -....+|-|+-| +|+|||++++.|... .-..+.++++.. .++....-...-...++.+
T Consensus 161 ~-----------~-~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~g~ 228 (236)
T 2bm8_A 161 A-----------H-ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMDMLYANASSQLDRGV 228 (236)
T ss_dssp S-----------C-SSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEETTTTTSCTTTTTCE
T ss_pred c-----------h-HhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEEcchhhcccccccchH
Confidence 2 1 145678999998 999999999987311 123567777776 5665432111112334555
Q ss_pred EEEEe
Q 009719 516 LVATK 520 (527)
Q Consensus 516 Li~~K 520 (527)
+...|
T Consensus 229 ~~~~~ 233 (236)
T 2bm8_A 229 LRRVA 233 (236)
T ss_dssp EEECC
T ss_pred hhhcc
Confidence 55544
|
| >3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=97.47 E-value=9.6e-05 Score=74.57 Aligned_cols=53 Identities=15% Similarity=0.113 Sum_probs=44.1
Q ss_pred cEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 180 AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 180 a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.+..+|.. .|+| +||+|+++.++|||.+.. ..+|+++.|+|||||+|++...
T Consensus 234 v~~~~~d~~-~~~p--~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 234 WKVVEGDFL-REVP--HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp EEEEECCTT-TCCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred eEEEecCCC-CCCC--CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 456677774 4555 899999999999998774 3599999999999999999764
|
| >1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=97.47 E-value=3e-05 Score=73.35 Aligned_cols=96 Identities=19% Similarity=0.253 Sum_probs=59.6
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc-cc-cccccCCCCCCCCCccchhhhcCccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL-IG-VYHDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL-iG-~~hdwce~fstYPrtyDLiHa~~~fs 446 (527)
-.+|||+|||.|.++..|.+... +|+-+|.. ..+..+-++ |+ +- +..|..+ ++ .+.+||+|.+.....
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~~~~ 116 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAERGY---EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE-IA-FKNEFDAVTMFFSTI 116 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-CC-CCSCEEEEEECSSGG
T ss_pred CCEEEEeCCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh-cc-cCCCccEEEEcCCch
Confidence 46899999999999999977754 34444433 444444332 32 11 1223222 22 457899998753222
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
.+. +.=....+|-++-|+|+|||.+|+.
T Consensus 117 ~~~------~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 117 MYF------DEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp GGS------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcC------CHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 221 1113467889999999999999985
|
| >1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=2.8e-05 Score=67.93 Aligned_cols=56 Identities=14% Similarity=-0.033 Sum_probs=44.5
Q ss_pred cEEeeccccCCC--------CCCCcccEEEecCcccccccCh----------HHHHHHHhhcccCCcEEEEecC
Q 009719 180 AFVAMLGTRRLP--------FPAFSFDIVHCSRCLIPFTAYN----------ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 180 a~~~v~dae~LP--------FpD~SFDlV~cs~~l~hw~d~~----------~~aL~Ei~RVLRPGG~lviS~p 235 (527)
..+.++|...++ +++++||+|++...+++..... ..++.++.|+|||||+++++.+
T Consensus 64 ~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 64 VDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp EEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEcccccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 556677888877 8899999999987764433320 3489999999999999999876
|
| >3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.46 E-value=4e-05 Score=72.18 Aligned_cols=88 Identities=9% Similarity=0.057 Sum_probs=60.5
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc--ccccccccCCCCCCC-CCccchhhhcCccccccC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG--LIGVYHDWCEPFSTY-PRTYDLIHVSGIESLIKN 450 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG--LiG~~hdwce~fstY-PrtyDLiHa~~~fs~~~~ 450 (527)
..|||+|||.|.++..|.+... .|+-+|.. ..+..+-++. +-=+..|+.+.++.- +.+||+|.+. .
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~--~----- 119 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQAA---RWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR--R----- 119 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE--S-----
T ss_pred CeEEEeCCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC--C-----
Confidence 5799999999999999987754 34444433 5566665552 222234554554422 4799999875 1
Q ss_pred CCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 451 PGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 451 ~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
+...+|-|+-|+|||||.++.-
T Consensus 120 --------~~~~~l~~~~~~LkpgG~l~~~ 141 (226)
T 3m33_A 120 --------GPTSVILRLPELAAPDAHFLYV 141 (226)
T ss_dssp --------CCSGGGGGHHHHEEEEEEEEEE
T ss_pred --------CHHHHHHHHHHHcCCCcEEEEe
Confidence 2357899999999999999943
|
| >1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36 | Back alignment and structure |
|---|
Probab=97.46 E-value=4e-05 Score=71.58 Aligned_cols=118 Identities=9% Similarity=0.088 Sum_probs=71.5
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc-cc--------------cccccccCCCCCCCC----C
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR-GL--------------IGVYHDWCEPFSTYP----R 434 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR-GL--------------iG~~hdwce~fstYP----r 434 (527)
..|||+|||.|.++..|.++.. .|+-+|-. .-|..+-+| ++ ..-..=.|.-+...| .
T Consensus 24 ~~vLD~GCG~G~~~~~la~~g~---~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~ 100 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQGY---HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIG 100 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHHCC---EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHH
T ss_pred CEEEEeCCCCcHhHHHHHHCCC---eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCC
Confidence 4799999999999999977653 34444433 445555554 11 000111122222333 6
Q ss_pred ccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcE-EEE-eCCH----------HHHHHHHHHHhcCCceeEE
Q 009719 435 TYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGT-VVV-RDSP----------EVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 435 tyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~-~ii-rd~~----------~~~~~i~~i~~~l~W~~~~ 502 (527)
+||+|-+..+|.... .-....++-||-|+|||||. +++ -+-. -..+++++++.. .|++..
T Consensus 101 ~fD~v~~~~~l~~l~-------~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~ 172 (203)
T 1pjz_A 101 HCAAFYDRAAMIALP-------ADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTK 172 (203)
T ss_dssp SEEEEEEESCGGGSC-------HHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEE
T ss_pred CEEEEEECcchhhCC-------HHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEE
Confidence 899999877776542 12234578899999999998 333 2210 124677787777 787654
Q ss_pred e
Q 009719 503 H 503 (527)
Q Consensus 503 ~ 503 (527)
.
T Consensus 173 ~ 173 (203)
T 1pjz_A 173 V 173 (203)
T ss_dssp E
T ss_pred e
Confidence 4
|
| >2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E | Back alignment and structure |
|---|
Probab=97.46 E-value=9e-05 Score=70.94 Aligned_cols=71 Identities=18% Similarity=0.182 Sum_probs=50.0
Q ss_pred cChHHHHHHHHHc------------CCC-cEEeeccccC-CC--CCCCcccEEEecCcccccccCh--------HHHHHH
Q 009719 164 DSHKAQIQFALER------------GIP-AFVAMLGTRR-LP--FPAFSFDIVHCSRCLIPFTAYN--------ATYLIE 219 (527)
Q Consensus 164 D~seaqvq~A~eR------------g~p-a~~~v~dae~-LP--FpD~SFDlV~cs~~l~hw~d~~--------~~aL~E 219 (527)
|.++.+++.|+++ +++ +.+..+|+.. || |++++||.|+.... -.|.... ..++.+
T Consensus 80 D~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~d~v~~~~p-~p~~k~~~~~~r~~~~~~l~~ 158 (246)
T 2vdv_E 80 EIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQLSKMFFCFP-DPHFKQRKHKARIITNTLLSE 158 (246)
T ss_dssp ESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCEEEEEEESC-CCC------CSSCCCHHHHHH
T ss_pred EcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccccCEEEEECC-CcccccchhHHhhccHHHHHH
Confidence 6677888877653 543 5677788776 78 88999999985432 1221110 249999
Q ss_pred HhhcccCCcEEEEecC
Q 009719 220 VDRLLRPGGYLVISGP 235 (527)
Q Consensus 220 i~RVLRPGG~lviS~p 235 (527)
+.|+|||||+|++.+.
T Consensus 159 ~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 159 YAYVLKEGGVVYTITD 174 (246)
T ss_dssp HHHHEEEEEEEEEEES
T ss_pred HHHHcCCCCEEEEEec
Confidence 9999999999999764
|
| >2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.45 E-value=7.3e-05 Score=69.14 Aligned_cols=65 Identities=15% Similarity=0.130 Sum_probs=49.7
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCCCC-CCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCC
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLPFP-AFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LPFp-D~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
|.++.+++.|+++ +.+ ..+..+|.. .+++ +++||+|++..+++|+. .++.|+|||||+++++.++
T Consensus 109 D~~~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~v~~~~~~~~~~-------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 109 ERIPELAEKAERTLRKLGYDNVIVIVGDGT-LGYEPLAPYDRIYTTAAGPKIP-------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp ESCHHHHHHHHHHHHHHTCTTEEEEESCGG-GCCGGGCCEEEEEESSBBSSCC-------HHHHHTEEEEEEEEEEESS
T ss_pred eCCHHHHHHHHHHHHHcCCCCeEEEECCcc-cCCCCCCCeeEEEECCchHHHH-------HHHHHHcCCCcEEEEEECC
Confidence 6678888888765 443 456666763 3444 78999999999987765 4889999999999998874
|
| >3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=3.1e-05 Score=76.49 Aligned_cols=112 Identities=10% Similarity=0.051 Sum_probs=65.4
Q ss_pred HHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc-----------c--cc-cccc
Q 009719 360 YYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG-----------L--IG-VYHD 424 (527)
Q Consensus 360 ~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG-----------L--iG-~~hd 424 (527)
.+.+.+...+. .-.+|||+|||.|.++..|...+.. +|+-.|-. ..+..+-+|- . +- +..|
T Consensus 23 ~~~~~l~~~~~--~~~~VLDlGcG~G~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D 98 (313)
T 3bgv_A 23 EFLEKVRQKKK--RDITVLDLGCGKGGDLLKWKKGRIN--KLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITAD 98 (313)
T ss_dssp HHHHHHHHTC----CCEEEEETCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECC
T ss_pred HHHHHhhhccC--CCCEEEEECCCCcHHHHHHHhcCCC--EEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEec
Confidence 35554442222 3458999999999999988765432 33333433 4444444331 1 11 1222
Q ss_pred cCCCCC---CC---CCccchhhhcCccccc-cCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 425 WCEPFS---TY---PRTYDLIHVSGIESLI-KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 425 wce~fs---tY---PrtyDLiHa~~~fs~~-~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
. +.++ .+ +.+||+|-+..++... . +.-....+|-|+-|+|+|||.+++...
T Consensus 99 ~-~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~------~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 99 S-SKELLIDKFRDPQMCFDICSCQFVCHYSFE------SYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp T-TTSCSTTTCSSTTCCEEEEEEETCGGGGGG------SHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred c-cccchhhhcccCCCCEEEEEEecchhhccC------CHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 2 2222 13 3589999998766422 1 111235789999999999999999853
|
| >4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=97.44 E-value=1.2e-05 Score=73.17 Aligned_cols=89 Identities=10% Similarity=-0.023 Sum_probs=45.6
Q ss_pred hhccccccccC--CeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCC-----CcccEEEecCcccccc-
Q 009719 143 VASFGGSMLSE--NILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPA-----FSFDIVHCSRCLIPFT- 210 (527)
Q Consensus 143 vgsfga~Ll~r--~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD-----~SFDlV~cs~~l~hw~- 210 (527)
.|.++..|..+ +.. +...|.++.+++.|+++ +..+.+.++|+.. ++++ ++||+|+|.-..++..
T Consensus 41 ~G~~~~~l~~~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~ 116 (215)
T 4dzr_A 41 SGCIAVSIALACPGVS---VTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIERAERGRPWHAIVSNPPYIPTGE 116 (215)
T ss_dssp BCHHHHHHHHHCTTEE---EEEEECC-------------------CCHHHHHH-HHHHHHHTTCCBSEEEECCCCCC---
T ss_pred HhHHHHHHHHhCCCCe---EEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhhhhccCcccEEEECCCCCCCcc
Confidence 34444445554 322 33336677778777655 2234566677766 7777 9999999964332211
Q ss_pred -----cCh-------------------HHHHHHHhhcccCCcE-EEEecC
Q 009719 211 -----AYN-------------------ATYLIEVDRLLRPGGY-LVISGP 235 (527)
Q Consensus 211 -----d~~-------------------~~aL~Ei~RVLRPGG~-lviS~p 235 (527)
... ..++.++.|+|||||+ +++..+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 117 IDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp ---------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred ccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 110 3488999999999999 666554
|
| >3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=4.4e-05 Score=76.19 Aligned_cols=136 Identities=18% Similarity=0.201 Sum_probs=84.8
Q ss_pred ccCCCCeeeEeecCCCccchhhhccC--CCeeEEEecCCCCCCchhHhh----hccccc----cccccCCCCCCCCCccc
Q 009719 368 KLGTPAIRNIMDMNAFFGGFAAALTS--DPVWVMNVVPARKSSTLSVIY----DRGLIG----VYHDWCEPFSTYPRTYD 437 (527)
Q Consensus 368 ~i~~~~iRnvmDm~ag~GgFaAaL~~--~~VwvMnvvp~~~~ntl~vi~----eRGLiG----~~hdwce~fstYPrtyD 437 (527)
.+......+|+|+|||.|.++.+|.+ ..+-+..+ |-+..+..+- +.|+-+ +-+|..++ +|..||
T Consensus 164 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~p~~~D 237 (332)
T 3i53_A 164 KYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVL---DLQGPASAAHRRFLDTGLSGRAQVVVGSFFDP---LPAGAG 237 (332)
T ss_dssp SSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECHHHHHHHHHHHHHTTCTTTEEEEECCTTSC---CCCSCS
T ss_pred hCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEe---cCHHHHHHHHHhhhhcCcCcCeEEecCCCCCC---CCCCCc
Confidence 34556678999999999999988854 22222222 2233333332 234421 22343333 455899
Q ss_pred hhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH----------------------HHHHHHHHHHhc
Q 009719 438 LIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP----------------------EVIDKVSRIANT 495 (527)
Q Consensus 438 LiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~----------------------~~~~~i~~i~~~ 495 (527)
+|.+..++..|. + =....+|-++=|.|+|||+++|.|.. ...++++++++.
T Consensus 238 ~v~~~~vlh~~~------~-~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~ 310 (332)
T 3i53_A 238 GYVLSAVLHDWD------D-LSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQ 310 (332)
T ss_dssp EEEEESCGGGSC------H-HHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHH
T ss_pred EEEEehhhccCC------H-HHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHH
Confidence 999999998774 1 12357899999999999999997531 013456677777
Q ss_pred CCceeEEecCCCCCCCCceEEEEEe
Q 009719 496 VRWTAAVHDKEPGSNGREKILVATK 520 (527)
Q Consensus 496 l~W~~~~~~~e~~~~~~ekiLi~~K 520 (527)
--++........ + ..|+.++|
T Consensus 311 aGf~~~~~~~~~-~---~~vie~r~ 331 (332)
T 3i53_A 311 AGLAVRAAHPIS-Y---VSIVEMTA 331 (332)
T ss_dssp TTEEEEEEEECS-S---SEEEEEEE
T ss_pred CCCEEEEEEECC-C---cEEEEEee
Confidence 777754332221 1 56777776
|
| >3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=2.8e-05 Score=79.15 Aligned_cols=99 Identities=14% Similarity=0.191 Sum_probs=61.0
Q ss_pred eeEeecCCCccchhhhccCCCe-eEEEecCCCCC-CchhHhhhccc---cccccccCCCCCCCC-CccchhhhcCccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKS-STLSVIYDRGL---IGVYHDWCEPFSTYP-RTYDLIHVSGIESLI 448 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~-ntl~vi~eRGL---iG~~hdwce~fstYP-rtyDLiHa~~~fs~~ 448 (527)
.+|||+|||.|.++.+|.+.+. -|.-|=+...- .....+-+.|+ |-+.+.=-+.+ .+| .+||+|.+..+....
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~Iis~~~~~~l 146 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEV-ELPVEKVDIIISEWMGYCL 146 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTC-CCSSSCEEEEEECCCBBTB
T ss_pred CEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHc-cCCCCceEEEEEccccccc
Confidence 5799999999999998877653 33333333111 11122333455 22332222233 255 899999987654433
Q ss_pred cCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 449 KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 449 ~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
. ..-.+..++-+++|+|+|||.+|..
T Consensus 147 ~------~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 147 F------YESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp T------BTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred c------CchhHHHHHHHHHHhCCCCCEEccc
Confidence 2 2234567888999999999999755
|
| >1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=1.3e-05 Score=75.80 Aligned_cols=100 Identities=12% Similarity=0.086 Sum_probs=59.0
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc----c-cc-cccccCCCCCCCC-Cccchhhhc-Ccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG----L-IG-VYHDWCEPFSTYP-RTYDLIHVS-GIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG----L-iG-~~hdwce~fstYP-rtyDLiHa~-~~f 445 (527)
..|||+|||.|.++..|.....- +|+-+|.. +.+..+-++. . +- +..|+.+....+| .+||+|.++ ..+
T Consensus 62 ~~vLDiGcGtG~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~ 139 (236)
T 1zx0_A 62 GRVLEVGFGMAIAASKVQEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp EEEEEECCTTSHHHHHHHTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CeEEEEeccCCHHHHHHHhcCCC--eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCccc
Confidence 57999999999999999775542 34444443 5555554432 1 11 1112222111234 799999883 221
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
... ..+.=..+.++-|+-|+|||||.+++-+
T Consensus 140 -~~~----~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 140 -SEE----TWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp -BGG----GTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred -chh----hhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 111 0011112356899999999999999875
|
| >3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=97.43 E-value=3.9e-05 Score=77.39 Aligned_cols=136 Identities=14% Similarity=0.133 Sum_probs=81.1
Q ss_pred ccCCCCeeeEeecCCCccchhhhccC--CCeeEEEecCCCCCCchh--Hhhhcccc----ccccccCCCCCCCCCccchh
Q 009719 368 KLGTPAIRNIMDMNAFFGGFAAALTS--DPVWVMNVVPARKSSTLS--VIYDRGLI----GVYHDWCEPFSTYPRTYDLI 439 (527)
Q Consensus 368 ~i~~~~iRnvmDm~ag~GgFaAaL~~--~~VwvMnvvp~~~~ntl~--vi~eRGLi----G~~hdwce~fstYPrtyDLi 439 (527)
.+......+|+|+|||.|.++.+|.+ ..+-+..+ |-+..+. .+-+.|+- =+-+|..+ ..| +||+|
T Consensus 179 ~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~~~~~~~~~~~~v~~~~~d~~~---~~p-~~D~v 251 (348)
T 3lst_A 179 AGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLL---DRAEVVARHRLDAPDVAGRWKVVEGDFLR---EVP-HADVH 251 (348)
T ss_dssp HSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEE---ECHHHHTTCCCCCGGGTTSEEEEECCTTT---CCC-CCSEE
T ss_pred hCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEe---cCHHHhhcccccccCCCCCeEEEecCCCC---CCC-CCcEE
Confidence 34556789999999999999998854 23322221 1111000 01112331 12234333 356 99999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC---------H----------------HHHHHHHHHHh
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS---------P----------------EVIDKVSRIAN 494 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~---------~----------------~~~~~i~~i~~ 494 (527)
.+..++-.|. + =....+|-|+-|+|||||.++|.|. . ...++++++++
T Consensus 252 ~~~~vlh~~~------d-~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~ 324 (348)
T 3lst_A 252 VLKRILHNWG------D-EDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFT 324 (348)
T ss_dssp EEESCGGGSC------H-HHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHH
T ss_pred EEehhccCCC------H-HHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHH
Confidence 9999998774 1 1124789999999999999999752 0 02345667777
Q ss_pred cCCceeEEecCCCCCCCCceEEEEEe
Q 009719 495 TVRWTAAVHDKEPGSNGREKILVATK 520 (527)
Q Consensus 495 ~l~W~~~~~~~e~~~~~~ekiLi~~K 520 (527)
.--++....... + ....|+.++|
T Consensus 325 ~aGf~~~~~~~~-~--~~~~vie~~p 347 (348)
T 3lst_A 325 AAGLRLDRVVGT-S--SVMSIAVGVP 347 (348)
T ss_dssp HTTEEEEEEEEC-S--SSCEEEEEEE
T ss_pred HCCCceEEEEEC-C--CCcEEEEEEe
Confidence 777776543221 1 2345666654
|
| >2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.42 E-value=6.3e-05 Score=66.72 Aligned_cols=110 Identities=9% Similarity=0.126 Sum_probs=72.4
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCCCchhHhhhc----cc--c-ccccccCCCCCCCCCccchhhhcCcccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDR----GL--I-GVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~ntl~vi~eR----GL--i-G~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
.+|||+|||.|.++.+|.....-|..+=+. +..+..+-++ |+ + -+..|+.++++. .+||+|.++..
T Consensus 37 ~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~--~~~D~i~~~~~--- 109 (183)
T 2yxd_A 37 DVVVDVGCGSGGMTVEIAKRCKFVYAIDYL--DGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDK--LEFNKAFIGGT--- 109 (183)
T ss_dssp CEEEEESCCCSHHHHHHHTTSSEEEEEECS--HHHHHHHHHHHHHTTCCSEEEEESCHHHHGGG--CCCSEEEECSC---
T ss_pred CEEEEeCCCCCHHHHHHHhcCCeEEEEeCC--HHHHHHHHHHHHHcCCCcEEEEECCccccccC--CCCcEEEECCc---
Confidence 489999999999999998743333222211 1333333333 33 1 122344333321 58999998755
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeC-CHHHHHHHHHHHhcCCceeEEe
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~i~~i~~~l~W~~~~~ 503 (527)
..+..++-++-|+ |||.+++.+ ..+.+.++.+.++...|++...
T Consensus 110 ----------~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 110 ----------KNIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp ----------SCHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred ----------ccHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEEEE
Confidence 2346788888888 999999987 6667788888888888887765
|
| >1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=4.1e-05 Score=77.23 Aligned_cols=139 Identities=21% Similarity=0.208 Sum_probs=82.9
Q ss_pred CCCCeeeEeecCCCccchhhhccCC--CeeEEEecCCCCCCchhHhhh----cccc----ccccccCCCCCCCCCccchh
Q 009719 370 GTPAIRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKSSTLSVIYD----RGLI----GVYHDWCEPFSTYPRTYDLI 439 (527)
Q Consensus 370 ~~~~iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~ntl~vi~e----RGLi----G~~hdwce~fstYPrtyDLi 439 (527)
....-.+|+|+|||.|.++.+|.+. .+-+..+ |-+..+..+-+ .|+- =+.+|..++ .|..||+|
T Consensus 179 ~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~D~v 252 (374)
T 1qzz_A 179 DWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLV---ELAGPAERARRRFADAGLADRVTVAEGDFFKP---LPVTADVV 252 (374)
T ss_dssp CCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECHHHHHHHHHHHHHTTCTTTEEEEECCTTSC---CSCCEEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEE---eCHHHHHHHHHHHHhcCCCCceEEEeCCCCCc---CCCCCCEE
Confidence 3445679999999999999988643 2322222 11233333322 3432 123344433 45569999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC--H--H-----------------------HHHHHHHH
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS--P--E-----------------------VIDKVSRI 492 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~--~--~-----------------------~~~~i~~i 492 (527)
.+..++..|. + =....+|-++-|+|+|||+++|.+. . + ..++++++
T Consensus 253 ~~~~vl~~~~------~-~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 325 (374)
T 1qzz_A 253 LLSFVLLNWS------D-EDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDL 325 (374)
T ss_dssp EEESCGGGSC------H-HHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHH
T ss_pred EEeccccCCC------H-HHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHH
Confidence 9999987764 1 1123689999999999999998654 1 1 23456667
Q ss_pred HhcCCceeEEecCCCCCC--CCceEEEEEec
Q 009719 493 ANTVRWTAAVHDKEPGSN--GREKILVATKS 521 (527)
Q Consensus 493 ~~~l~W~~~~~~~e~~~~--~~ekiLi~~K~ 521 (527)
++.--++......-.+.. ....++.++|.
T Consensus 326 l~~aGf~~~~~~~~~~~~~~~~~~~i~~~~~ 356 (374)
T 1qzz_A 326 AGSAGLALASERTSGSTTLPFDFSILEFTAV 356 (374)
T ss_dssp HHTTTEEEEEEEEECCSSCSSCEEEEEEEEC
T ss_pred HHHCCCceEEEEECCCCcccCCcEEEEEEEC
Confidence 777777754332111111 11268888875
|
| >3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=2.7e-05 Score=72.67 Aligned_cols=132 Identities=17% Similarity=0.180 Sum_probs=72.8
Q ss_pred eeeEeecCCCccchhhhccCC---CeeEEEecCCCCC-CchhHhhh----ccccc---cc-cccCCCCCCCC----Cccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKS-STLSVIYD----RGLIG---VY-HDWCEPFSTYP----RTYD 437 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~-ntl~vi~e----RGLiG---~~-hdwce~fstYP----rtyD 437 (527)
-.+|||+|||.|+++.+|... ..- |+-.+.. ..+..+-+ .|+-. +. .|..+.++..+ .+||
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGR---VVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCE---EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCE---EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 368999999999999988665 322 2222222 33333322 24421 11 12222111111 4699
Q ss_pred hhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH------------HHHHHHHH----HHhcCCceeE
Q 009719 438 LIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP------------EVIDKVSR----IANTVRWTAA 501 (527)
Q Consensus 438 LiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~------------~~~~~i~~----i~~~l~W~~~ 501 (527)
+|.++..... ...++-++-|+|||||.+++.+.. .....+++ +...-+++..
T Consensus 136 ~v~~d~~~~~------------~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 203 (223)
T 3duw_A 136 FIFIDADKQN------------NPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSAT 203 (223)
T ss_dssp EEEECSCGGG------------HHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEE
T ss_pred EEEEcCCcHH------------HHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEE
Confidence 9987644332 246778889999999999997521 11223333 3344466665
Q ss_pred EecCCCCCCCCceEEEEEec
Q 009719 502 VHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 502 ~~~~e~~~~~~ekiLi~~K~ 521 (527)
....- +..+.+.+++++|+
T Consensus 204 ~~p~~-~~~~~dG~~~~~~~ 222 (223)
T 3duw_A 204 ALQTV-GSKGYDGFIMAVVK 222 (223)
T ss_dssp EEEEE-ETTEEEEEEEEEEC
T ss_pred EEecc-CCCCCCeeEEEEEe
Confidence 54321 22335678888864
|
| >3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00026 Score=68.85 Aligned_cols=66 Identities=15% Similarity=0.135 Sum_probs=51.0
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCCCC---CCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLPFP---AFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LPFp---D~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++.++++|+++ ++. +.+..++++.+++. +++||+|+|..+ .++ ..++.++.|+|||||+|++..
T Consensus 111 D~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a~-~~~----~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 111 DATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAV-APL----CVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp ESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEESS-CCH----HHHHHHHGGGEEEEEEEEEEE
T ss_pred ECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECCc-CCH----HHHHHHHHHHcCCCeEEEEEe
Confidence 7788888888754 554 66778888888764 589999998643 232 349999999999999998754
|
| >2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=4.7e-05 Score=74.15 Aligned_cols=140 Identities=14% Similarity=0.222 Sum_probs=80.9
Q ss_pred eeEeecCCCccchhhhccC-CCeeEEEecCCCCC-CchhHhhhc----cc--cc-cccccCCCCCCCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTS-DPVWVMNVVPARKS-STLSVIYDR----GL--IG-VYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~-~~VwvMnvvp~~~~-ntl~vi~eR----GL--iG-~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
.+|+|+|||.|.++.+|.. .|-. +|+-+|.. ..+.++-++ |+ +- +..|+.+.++ +.+||+|-++--+
T Consensus 111 ~~vLDlG~GsG~~~~~la~~~~~~--~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~npPy 186 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASERPDC--EIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSNPPY 186 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTS--EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEECCCC
T ss_pred CEEEEecCCccHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEECCCC
Confidence 4799999999999988863 2221 23333433 444444333 33 21 2335555443 4789999987544
Q ss_pred ccccC----CCC---CCCC---------CcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCceeEEecCCCCC
Q 009719 446 SLIKN----PGS---NKNS---------CSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAVHDKEPGS 509 (527)
Q Consensus 446 s~~~~----~~~---~~~r---------C~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~~~~~~e~~~ 509 (527)
..... +.. +... -.+..++-++-|+|+|||++++.......++++++++...|+...... .-
T Consensus 187 ~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~v~~~~--d~ 264 (276)
T 2b3t_A 187 IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCR--DY 264 (276)
T ss_dssp BCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHHTTCTTCCEEE--CT
T ss_pred CCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHHCCCcEEEEEe--cC
Confidence 32110 000 0000 112457778999999999999986555556677777666665321111 22
Q ss_pred CCCceEEEEEe
Q 009719 510 NGREKILVATK 520 (527)
Q Consensus 510 ~~~ekiLi~~K 520 (527)
.+.+++++++|
T Consensus 265 ~g~~r~~~~~~ 275 (276)
T 2b3t_A 265 GDNERVTLGRY 275 (276)
T ss_dssp TSSEEEEEEEC
T ss_pred CCCCcEEEEEE
Confidence 35678988875
|
| >2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.40 E-value=8.3e-05 Score=73.94 Aligned_cols=133 Identities=17% Similarity=0.168 Sum_probs=83.0
Q ss_pred cCCCCeeeEeecCCCccchhhhccCC----CeeEEEecCCCCCCchhHhhh----ccc----cccccccCCCCCCCCCcc
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSD----PVWVMNVVPARKSSTLSVIYD----RGL----IGVYHDWCEPFSTYPRTY 436 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~----~VwvMnvvp~~~~ntl~vi~e----RGL----iG~~hdwce~fstYPrty 436 (527)
+.... .+|+|+|||.|.++.+|.+. .+..+-+ | ..+..+-+ .|+ --+-+|..+ .+|..|
T Consensus 164 ~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~----~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~ 234 (334)
T 2ip2_A 164 LDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-E----GSLGVARDNLSSLLAGERVSLVGGDMLQ---EVPSNG 234 (334)
T ss_dssp SCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-T----TCTHHHHHHTHHHHHTTSEEEEESCTTT---CCCSSC
T ss_pred CCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-H----HHHHHHHHHHhhcCCCCcEEEecCCCCC---CCCCCC
Confidence 34445 89999999999999988643 2444443 3 33333322 233 223344444 357889
Q ss_pred chhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH-------------H------------HHHHHHH
Q 009719 437 DLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP-------------E------------VIDKVSR 491 (527)
Q Consensus 437 DLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~-------------~------------~~~~i~~ 491 (527)
|+|.+..++..|.+ . ....+|-++-|.|+|||+++|.|.. + ..+++++
T Consensus 235 D~v~~~~vl~~~~~-----~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ 307 (334)
T 2ip2_A 235 DIYLLSRIIGDLDE-----A--ASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVD 307 (334)
T ss_dssp SEEEEESCGGGCCH-----H--HHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHH
T ss_pred CEEEEchhccCCCH-----H--HHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHH
Confidence 99999999887741 1 2247899999999999999997410 0 1344566
Q ss_pred HHhcCCceeEEecCCCCCCCCceEEEEEe
Q 009719 492 IANTVRWTAAVHDKEPGSNGREKILVATK 520 (527)
Q Consensus 492 i~~~l~W~~~~~~~e~~~~~~ekiLi~~K 520 (527)
+++.--++....... + ....|+.++|
T Consensus 308 ll~~aGf~~~~~~~~-~--~~~~~i~~~~ 333 (334)
T 2ip2_A 308 LLGRGGFAVERIVDL-P--METRMIVAAR 333 (334)
T ss_dssp HHHHTTEEEEEEEEE-T--TTEEEEEEEE
T ss_pred HHHHCCCceeEEEEC-C--CCCEEEEEEe
Confidence 666666765432211 1 2356888877
|
| >2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00018 Score=69.97 Aligned_cols=73 Identities=12% Similarity=0.111 Sum_probs=51.7
Q ss_pred cCcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecC-------------cccccc-----------cC
Q 009719 162 PRDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSR-------------CLIPFT-----------AY 212 (527)
Q Consensus 162 p~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~-------------~l~hw~-----------d~ 212 (527)
..|.++.+++.|+++ +++ +.+..+|... ++++++||+|+|.- ++.|.+ +.
T Consensus 138 ~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~-~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~ 216 (276)
T 2b3t_A 138 AVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFS-ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMAD 216 (276)
T ss_dssp EECSSHHHHHHHHHHHHHHTCCSEEEECCSTTG-GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHH
T ss_pred EEECCHHHHHHHHHHHHHcCCCceEEEEcchhh-hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHH
Confidence 337788888888765 544 5667777654 45578999999973 332322 11
Q ss_pred hHHHHHHHhhcccCCcEEEEecC
Q 009719 213 NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 213 ~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
...++.++.|+|||||++++..+
T Consensus 217 ~~~~l~~~~~~LkpgG~l~~~~~ 239 (276)
T 2b3t_A 217 IVHIIEQSRNALVSGGFLLLEHG 239 (276)
T ss_dssp HHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHHHHHHHHHhcCCCCEEEEEEC
Confidence 23488999999999999999865
|
| >2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0001 Score=67.32 Aligned_cols=132 Identities=11% Similarity=0.138 Sum_probs=68.4
Q ss_pred eeEeecCCCccchhhhccCC------CeeEEEecCCCCCCchhHhhhccccccccccCCCCC------------------
Q 009719 375 RNIMDMNAFFGGFAAALTSD------PVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFS------------------ 430 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~------~VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwce~fs------------------ 430 (527)
.+|||+|||.|+++.+|.+. .|.-+-+.|..... ++.=+..|..+. .
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~~--------~v~~~~~d~~~~-~~~~~~~~~~i~~~~~~~~ 94 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPIP--------NVYFIQGEIGKD-NMNNIKNINYIDNMNNNSV 94 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCCT--------TCEEEECCTTTT-SSCCC-----------CHH
T ss_pred CEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCCC--------CceEEEccccch-hhhhhccccccccccchhh
Confidence 57999999999999888543 24444444421111 111111222211 1
Q ss_pred ------CCC-CccchhhhcCccccccCCCCCCCCCc-------ccccceeecccccCCcEEEEeCC-HHHHHHHHHHHhc
Q 009719 431 ------TYP-RTYDLIHVSGIESLIKNPGSNKNSCS-------LVDLMVEMDRMLRPEGTVVVRDS-PEVIDKVSRIANT 495 (527)
Q Consensus 431 ------tYP-rtyDLiHa~~~fs~~~~~~~~~~rC~-------~~~illEmDRILRP~G~~iird~-~~~~~~i~~i~~~ 495 (527)
.++ .+||+|-++..+.... .+.-+ ...+|-|+-|+|+|||.+++..- .+....+...++.
T Consensus 95 ~~~~~~~~~~~~fD~v~~~~~~~~~g-----~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~ 169 (201)
T 2plw_A 95 DYKLKEILQDKKIDIILSDAAVPCIG-----NKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKG 169 (201)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCS-----CHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHT
T ss_pred HHHHHhhcCCCcccEEEeCCCcCCCC-----CcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHH
Confidence 023 6899999875543110 00000 12367789999999999998631 1222334444444
Q ss_pred CCceeEEe-cCCCCCCCCceEEEEEe
Q 009719 496 VRWTAAVH-DKEPGSNGREKILVATK 520 (527)
Q Consensus 496 l~W~~~~~-~~e~~~~~~ekiLi~~K 520 (527)
.-.++... +....+...|..+||++
T Consensus 170 ~f~~v~~~~~~~~r~~s~e~y~v~~~ 195 (201)
T 2plw_A 170 MFQLVHTTKPKASRNESREIYLVCKN 195 (201)
T ss_dssp TEEEEEECCCC-----CCEEEEEEEE
T ss_pred HHheEEEECCcccCCcCceEEEEEec
Confidence 32223332 22233445788999876
|
| >1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=4.9e-05 Score=76.84 Aligned_cols=67 Identities=13% Similarity=0.035 Sum_probs=51.0
Q ss_pred cChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccC---CcEEEEecC
Q 009719 164 DSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRP---GGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRP---GG~lviS~p 235 (527)
|. ..+++.|++. ..+.+..+|... |+| +||+|+++.++|||.+.. ..+|+++.|+||| ||++++...
T Consensus 224 D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 224 DQ-PQVVGNLTGN-ENLNFVGGDMFK-SIP--SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp EC-HHHHSSCCCC-SSEEEEECCTTT-CCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred cc-HHHHhhcccC-CCcEEEeCccCC-CCC--CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 55 4666655442 125566777766 777 399999999999998765 1499999999999 999999764
|
| >3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ... | Back alignment and structure |
|---|
Probab=97.38 E-value=3.5e-05 Score=72.31 Aligned_cols=133 Identities=10% Similarity=0.088 Sum_probs=74.9
Q ss_pred eeeEeecCCCccchhhhccCC---CeeEEEecCCCCCCchhHhhh----ccccc----cccccCCCCCCCC-----Cccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKSSTLSVIYD----RGLIG----VYHDWCEPFSTYP-----RTYD 437 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~ntl~vi~e----RGLiG----~~hdwce~fstYP-----rtyD 437 (527)
-++|||+|||.|.++..|... ..-|..|-.. +..+.++-+ .|+-. +..|..+.++..+ .+||
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEIN--PDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESC--HHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCC--hHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 468999999999999888652 3322222211 133333322 24421 1223333334444 6899
Q ss_pred hhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-----HHHHHHHHHHHhcCCceeEEec-CCCCCCC
Q 009719 438 LIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-----PEVIDKVSRIANTVRWTAAVHD-KEPGSNG 511 (527)
Q Consensus 438 LiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-----~~~~~~i~~i~~~l~W~~~~~~-~e~~~~~ 511 (527)
+|.++.....+. ....++-++ |+|||||.+++.|- .++++.+++ .=.++..... .......
T Consensus 137 ~V~~d~~~~~~~---------~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~ 203 (221)
T 3u81_A 137 MVFLDHWKDRYL---------PDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRG---SSSFECTHYSSYLEYMKV 203 (221)
T ss_dssp EEEECSCGGGHH---------HHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHH---CTTEEEEEEEEEETTTTE
T ss_pred EEEEcCCcccch---------HHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhh---CCCceEEEcccccccCCC
Confidence 998876555442 112456667 99999999999863 334444433 3356655442 1122334
Q ss_pred CceEEEEEec
Q 009719 512 REKILVATKS 521 (527)
Q Consensus 512 ~ekiLi~~K~ 521 (527)
.+.+.+++++
T Consensus 204 ~dG~~~~~~~ 213 (221)
T 3u81_A 204 VDGLEKAIYQ 213 (221)
T ss_dssp EEEEEEEEEC
T ss_pred CCceEEEEEe
Confidence 5678888764
|
| >2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.38 E-value=2.3e-05 Score=71.69 Aligned_cols=96 Identities=13% Similarity=0.124 Sum_probs=58.4
Q ss_pred eeEeecCCCccchh-hhccCCCeeEEEecCCCCC-CchhHhhhc----cc-ccc-ccccCCCCCCCCCccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFA-AALTSDPVWVMNVVPARKS-STLSVIYDR----GL-IGV-YHDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFa-AaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL-iG~-~hdwce~fstYPrtyDLiHa~~~fs 446 (527)
.+|||+|||.|.++ +.+..... +|+-.|.. ..+..+-++ |. +-. ..|.. .++.-+.+||+|.+..++.
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVEDGY---KTYGIEISDLQLKKAENFSRENNFKLNISKGDIR-KLPFKDESMSFVYSYGTIF 100 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHHTTC---EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTT-SCCSCTTCEEEEEECSCGG
T ss_pred CEEEEECCCCCHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEECchh-hCCCCCCceeEEEEcChHH
Confidence 58999999999984 44444443 23333332 333333332 21 111 12222 2331137999999987776
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.+. .-+...+|-|+-|+|+|||.+++.+
T Consensus 101 ~~~-------~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 101 HMR-------KNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp GSC-------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hCC-------HHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 541 1235678999999999999999974
|
| >3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.38 E-value=2.3e-05 Score=79.85 Aligned_cols=98 Identities=10% Similarity=0.230 Sum_probs=63.8
Q ss_pred CCeeeEeecCCCccchhhhccC--CC--eeEEEecCCCCCCchhHhhh----cccc----ccccccCCCCCCCCCccchh
Q 009719 372 PAIRNIMDMNAFFGGFAAALTS--DP--VWVMNVVPARKSSTLSVIYD----RGLI----GVYHDWCEPFSTYPRTYDLI 439 (527)
Q Consensus 372 ~~iRnvmDm~ag~GgFaAaL~~--~~--VwvMnvvp~~~~ntl~vi~e----RGLi----G~~hdwce~fstYPrtyDLi 439 (527)
...+.|+|+|||.|.++.+|.+ .. |.++-+ +..+..+-+ .|+- =+-+|.-+.=.++|.+||+|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-----~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v 252 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-----PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAV 252 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-----HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-----HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEE
Confidence 3568999999999999999865 23 333332 333333333 2431 12233222100257899999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.+..++-.|. + =....+|-++=|.|+|||.++|.|
T Consensus 253 ~~~~vlh~~~------~-~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 253 WMSQFLDCFS------E-EEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp EEESCSTTSC------H-HHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEechhhhCC------H-HHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999988774 1 123467889999999999999865
|
| >1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00011 Score=70.26 Aligned_cols=54 Identities=11% Similarity=-0.011 Sum_probs=38.3
Q ss_pred EeeccccCCCC-----CCCcccEEEecCcccccccC--------hHHHHHHHhhcccCCcEEEEecC
Q 009719 182 VAMLGTRRLPF-----PAFSFDIVHCSRCLIPFTAY--------NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 182 ~~v~dae~LPF-----pD~SFDlV~cs~~l~hw~d~--------~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.++|...... ++++||+|+|.-.+++..+. ...++.++.|+|||||+++++..
T Consensus 149 ~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 149 IRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDR 215 (250)
T ss_dssp EEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEES
T ss_pred eeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeCc
Confidence 66677655221 45689999998655444321 12499999999999999999654
|
| >4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A | Back alignment and structure |
|---|
Probab=97.37 E-value=2.4e-05 Score=80.31 Aligned_cols=94 Identities=17% Similarity=0.193 Sum_probs=62.3
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCC-CchhHhhhc---------c-c----cc-cccccCCCCC-----
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKS-STLSVIYDR---------G-L----IG-VYHDWCEPFS----- 430 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~-ntl~vi~eR---------G-L----iG-~~hdwce~fs----- 430 (527)
..|||+|||.|.++..|.+. .. .|+-+|-. ..+..+-++ | + +- +..|..+ +.
T Consensus 85 ~~VLDlGcG~G~~~~~la~~~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~-l~~~~~~ 160 (383)
T 4fsd_A 85 ATVLDLGCGTGRDVYLASKLVGEHG---KVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIEN-LATAEPE 160 (383)
T ss_dssp CEEEEESCTTSHHHHHHHHHHTTTC---EEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTC-GGGCBSC
T ss_pred CEEEEecCccCHHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHH-hhhcccC
Confidence 47999999999988887543 22 22223322 455555554 4 1 11 1223332 20
Q ss_pred CCC-CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 431 TYP-RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 431 tYP-rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.+| .+||+|++..++.... +...+|-|+-|+|||||++++.+
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~---------d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLST---------NKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCS---------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchhcCC---------CHHHHHHHHHHHcCCCCEEEEEE
Confidence 234 7999999999888653 24689999999999999999975
|
| >3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=5.6e-05 Score=74.76 Aligned_cols=95 Identities=14% Similarity=0.033 Sum_probs=62.8
Q ss_pred CCeeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhh----cccc---c-cccccCCCCCCCC-Cccchhh
Q 009719 372 PAIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD----RGLI---G-VYHDWCEPFSTYP-RTYDLIH 440 (527)
Q Consensus 372 ~~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e----RGLi---G-~~hdwce~fstYP-rtyDLiH 440 (527)
..-.+|||+|||.|.++..|.+. ..-| +-+|-. ..+..+-+ .|+- - +..|.. .++ +| .+||+|.
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~-~~~~~fD~V~ 190 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGSRV---EGVTLSAAQADFGNRRARELRIDDHVRSRVCNML-DTP-FDKGAVTASW 190 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEE---EEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCC-CCTTCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCCEE---EEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh-cCC-CCCCCEeEEE
Confidence 34468999999999999998765 3322 222322 34444433 3432 1 122322 222 44 8999999
Q ss_pred hcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 441 VSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+..++... +...+|-|+-|+|+|||.+++.+
T Consensus 191 ~~~~l~~~----------~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 191 NNESTMYV----------DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EESCGGGS----------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCchhhC----------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 98877643 26889999999999999999874
|
| >3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.37 E-value=6.8e-05 Score=71.30 Aligned_cols=127 Identities=14% Similarity=0.303 Sum_probs=74.4
Q ss_pred eeeEeecCCCccchhhhccC--CCeeEEEecCCCCC-CchhHhhh----ccc---ccc-ccccCCCCC-CCCCccchhhh
Q 009719 374 IRNIMDMNAFFGGFAAALTS--DPVWVMNVVPARKS-STLSVIYD----RGL---IGV-YHDWCEPFS-TYPRTYDLIHV 441 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~--~~VwvMnvvp~~~~-ntl~vi~e----RGL---iG~-~hdwce~fs-tYPrtyDLiHa 441 (527)
-.+|||+|||.|.++.+|.. ...- |+-.|.. ..+..+-+ .|+ |-+ ..|..+.++ ..+.+||+|.+
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIH---VTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFI 148 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCE---EEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEE
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCE---EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEE
Confidence 46899999999999999876 3222 2223322 33333322 343 111 223333333 33579999987
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-----------------HHHHHHHHHH----HhcCCcee
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-----------------PEVIDKVSRI----ANTVRWTA 500 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-----------------~~~~~~i~~i----~~~l~W~~ 500 (527)
+.-.. ....++-++-|+|||||.+++.+- ......++++ ...-+++.
T Consensus 149 ~~~~~------------~~~~~l~~~~~~LkpgG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 216 (232)
T 3ntv_A 149 DAAKA------------QSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTT 216 (232)
T ss_dssp ETTSS------------SHHHHHHHHGGGEEEEEEEEEECTTGGGGGGCGGGGGCHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred cCcHH------------HHHHHHHHHHHhcCCCeEEEEeeCCcCccccCcccccchhhhHHHHHHHHHHHHHhcCCCeEE
Confidence 53222 245678888999999999999531 1122333333 44456776
Q ss_pred EEecCCCCCCCCceEEEEEec
Q 009719 501 AVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 501 ~~~~~e~~~~~~ekiLi~~K~ 521 (527)
..... .+.+.+++|+
T Consensus 217 ~~lp~------~dG~~i~~k~ 231 (232)
T 3ntv_A 217 NFLNI------DDGLAISIKG 231 (232)
T ss_dssp EEECS------TTCEEEEEEC
T ss_pred EEEEc------CCceEEEEEC
Confidence 66522 3578888885
|
| >3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00015 Score=70.58 Aligned_cols=137 Identities=14% Similarity=0.061 Sum_probs=80.0
Q ss_pred eeeEeecCCCccchhhhccCC--CeeEEEecCCCCCCchhHh----hhccc--cccccccCCCCC---CCCCccchhhhc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKSSTLSVI----YDRGL--IGVYHDWCEPFS---TYPRTYDLIHVS 442 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~ntl~vi----~eRGL--iG~~hdwce~fs---tYPrtyDLiHa~ 442 (527)
-.+|+|+|||.|.++..|... ..-|.-|=+.. ..+.++ -+-|+ +-++|.--|.+. .+..+||+|-+.
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATR--KKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCH--HHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCH--HHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 458999999999887776432 33333332221 222222 22355 333332223332 244789999874
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC---CHHHHHHHHHHHhcCCceeEEe-cC-CCCCCCCceEEE
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD---SPEVIDKVSRIANTVRWTAAVH-DK-EPGSNGREKILV 517 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird---~~~~~~~i~~i~~~l~W~~~~~-~~-e~~~~~~ekiLi 517 (527)
.+ .++..++-++-|+|+|||.+++-. ..+.+..+++.++.+-++.... +. -++....-.+++
T Consensus 159 a~-------------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~ 225 (249)
T 3g89_A 159 AV-------------APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVV 225 (249)
T ss_dssp SS-------------CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEE
T ss_pred Cc-------------CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEE
Confidence 22 234678888999999999888743 3566777777778888876432 11 222233445667
Q ss_pred EEeccCCC
Q 009719 518 ATKSLWKL 525 (527)
Q Consensus 518 ~~K~~w~~ 525 (527)
.+|.=.++
T Consensus 226 ~~k~~~t~ 233 (249)
T 3g89_A 226 LEKTAPTP 233 (249)
T ss_dssp EEECSCCC
T ss_pred EEeCCCCC
Confidence 77764443
|
| >3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00017 Score=72.14 Aligned_cols=90 Identities=16% Similarity=0.110 Sum_probs=58.0
Q ss_pred hccccccccC-CeeEEeeccCcChHHHHHHHHHcC---------CCcEEeeccccCCCC--CCCcccEEEecCccccccc
Q 009719 144 ASFGGSMLSE-NILTLSFAPRDSHKAQIQFALERG---------IPAFVAMLGTRRLPF--PAFSFDIVHCSRCLIPFTA 211 (527)
Q Consensus 144 gsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eRg---------~pa~~~v~dae~LPF--pD~SFDlV~cs~~l~hw~d 211 (527)
|.++..|+.. ++. .+...|.++.+++.|+++. ..+.+..+|+..+++ ++++||+|++.....+++.
T Consensus 107 G~~~~~l~~~~~~~--~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~d~~~~~~~~ 184 (304)
T 3bwc_A 107 GGVLREVLRHGTVE--HCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVIIDTTDPAGPA 184 (304)
T ss_dssp SHHHHHHHTCTTCC--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEEECC------
T ss_pred CHHHHHHHhCCCCC--EEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEECCCCccccc
Confidence 4444445544 121 2333477788999988753 225667788777665 5899999999765533332
Q ss_pred Ch---HHHHHHHhhcccCCcEEEEecC
Q 009719 212 YN---ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 212 ~~---~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.. ..++.++.|+|||||.|++...
T Consensus 185 ~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 185 SKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp ---CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 21 2489999999999999999765
|
| >1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=8.8e-05 Score=70.24 Aligned_cols=65 Identities=18% Similarity=0.277 Sum_probs=49.6
Q ss_pred cChHHHHHHHHHc----CC-CcEEeeccccCCCCCCCc-ccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCC
Q 009719 164 DSHKAQIQFALER----GI-PAFVAMLGTRRLPFPAFS-FDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 164 D~seaqvq~A~eR----g~-pa~~~v~dae~LPFpD~S-FDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
|.++.+++.|+++ ++ ...+..+|. .+++++++ ||+|++..++.++. .++.|+|||||+++++.++
T Consensus 121 D~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~~~~~~~~~-------~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 121 ERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPYDVIIVTAGAPKIP-------EPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp ESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEECSBBSSCC-------HHHHHTEEEEEEEEEEECS
T ss_pred eCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCccEEEECCcHHHHH-------HHHHHhcCCCcEEEEEEec
Confidence 6677888888764 43 345666676 56777665 99999998887654 3789999999999999874
|
| >1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38 | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00014 Score=73.11 Aligned_cols=94 Identities=16% Similarity=0.139 Sum_probs=60.4
Q ss_pred cChHHHHHHHHHc----CC-CcEEeeccccCCCCCCCcccEEEec------Cccccccc-------C--------hHHHH
Q 009719 164 DSHKAQIQFALER----GI-PAFVAMLGTRRLPFPAFSFDIVHCS------RCLIPFTA-------Y--------NATYL 217 (527)
Q Consensus 164 D~seaqvq~A~eR----g~-pa~~~v~dae~LPFpD~SFDlV~cs------~~l~hw~d-------~--------~~~aL 217 (527)
|.++.+++.|+++ |+ .+.+..+|+..++..+++||+|++. ..+.+-++ . ...+|
T Consensus 150 D~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L 229 (315)
T 1ixk_A 150 DVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLL 229 (315)
T ss_dssp CSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHH
Confidence 7778888877654 65 4567778888887767899999973 12222111 1 13589
Q ss_pred HHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEE
Q 009719 218 IEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYEL 260 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~ 260 (527)
.++.|+|||||+|++++-......+. +.++.+.+...++.
T Consensus 230 ~~~~~~LkpGG~lv~stcs~~~~Ene---~~v~~~l~~~~~~~ 269 (315)
T 1ixk_A 230 EKGLEVLKPGGILVYSTCSLEPEENE---FVIQWALDNFDVEL 269 (315)
T ss_dssp HHHHHHEEEEEEEEEEESCCCGGGTH---HHHHHHHHHSSEEE
T ss_pred HHHHHhCCCCCEEEEEeCCCChHHhH---HHHHHHHhcCCCEE
Confidence 99999999999999988644332222 23444445444443
|
| >2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=8.2e-05 Score=72.16 Aligned_cols=105 Identities=11% Similarity=0.041 Sum_probs=65.2
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIE 219 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~E 219 (527)
|.++..+...+. .+...|.++.+++.|+++ ++...+..++... ++++++||+|+|+...++ ...++.+
T Consensus 132 G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~-~~~~~~fD~Vv~n~~~~~----~~~~l~~ 203 (254)
T 2nxc_A 132 GVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA-ALPFGPFDLLVANLYAEL----HAALAPR 203 (254)
T ss_dssp SHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH-HGGGCCEEEEEEECCHHH----HHHHHHH
T ss_pred cHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhh-cCcCCCCCEEEECCcHHH----HHHHHHH
Confidence 444444555554 233336666777777653 5445566666544 366789999999765432 2348999
Q ss_pred HhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEee
Q 009719 220 VDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIA 262 (527)
Q Consensus 220 i~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~ 262 (527)
+.|+|||||++++++... ..-+.+.+..+...++...
T Consensus 204 ~~~~LkpgG~lils~~~~------~~~~~v~~~l~~~Gf~~~~ 240 (254)
T 2nxc_A 204 YREALVPGGRALLTGILK------DRAPLVREAMAGAGFRPLE 240 (254)
T ss_dssp HHHHEEEEEEEEEEEEEG------GGHHHHHHHHHHTTCEEEE
T ss_pred HHHHcCCCCEEEEEeecc------CCHHHHHHHHHHCCCEEEE
Confidence 999999999999987521 1233455555555565543
|
| >2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=6.6e-05 Score=73.86 Aligned_cols=113 Identities=11% Similarity=0.127 Sum_probs=71.2
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccccccccccCCCCCCC--CCccchhhhcCcccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGLIGVYHDWCEPFSTY--PRTYDLIHVSGIESL 447 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGLiG~~hdwce~fstY--PrtyDLiHa~~~fs~ 447 (527)
..|||+|||.|+|+.++....-- .|+-.|.. ..+..+-+ .|+-...+-.|.-...+ +.+||+|.++..+.
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p~~- 203 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVVR- 203 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCSS-
T ss_pred CEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCchh-
Confidence 47999999999999887543211 23333333 33443332 24432111112211122 57899998753322
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeCC-------HHHHHHHHHHHhcCCceeEE
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-------PEVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-------~~~~~~i~~i~~~l~W~~~~ 502 (527)
...++-++-|+|+|||.+++.+. .+.++++.+.++...|++..
T Consensus 204 ------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 204 ------------THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ------------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred ------------HHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 25678889999999999999642 35678888999999998876
|
| >1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6 | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00021 Score=71.99 Aligned_cols=65 Identities=20% Similarity=0.161 Sum_probs=47.4
Q ss_pred HHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCccccc--ccChHHHHHHHhhcccCCcEEEEe
Q 009719 169 QIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPF--TAYNATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 169 qvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw--~d~~~~aL~Ei~RVLRPGG~lviS 233 (527)
+++.|+++ +.. +.+..++++.+++++++||+|+|.....+. ......+|.++.|+|||||+++.+
T Consensus 72 ~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 72 IIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred HHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 56655543 543 567788999999999999999998533222 223334899999999999999843
|
| >1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6 | Back alignment and structure |
|---|
Probab=97.34 E-value=4.4e-05 Score=77.01 Aligned_cols=95 Identities=15% Similarity=0.164 Sum_probs=58.2
Q ss_pred eeEeecCCCccchhhhccCCCe-eEEEecCCCCCCchhHh----hhccc---cccccccCCCCCCCC-CccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKSSTLSVI----YDRGL---IGVYHDWCEPFSTYP-RTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~ntl~vi----~eRGL---iG~~hdwce~fstYP-rtyDLiHa~~~f 445 (527)
.+|||+|||.|.++..+.+.+. -|.-|=.. ..+..+ -+.|+ |-+.+.--+.++ .| ..||+|.+..+.
T Consensus 40 ~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s---~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKHGAKHVIGVDMS---SIIEMAKELVELNGFSDKITLLRGKLEDVH-LPFPKVDIIISEWMG 115 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHTCCSEEEEEESS---THHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSSSCEEEEEECCCB
T ss_pred CEEEEecCccHHHHHHHHHCCCCEEEEEChH---HHHHHHHHHHHHcCCCCCEEEEECchhhcc-CCCCcccEEEEeCch
Confidence 4899999999999888866543 23333222 123322 23354 223332222232 45 789999987554
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEE
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVV 479 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~ii 479 (527)
.... +.-.+..+|-+++|+|+|||.++.
T Consensus 116 ~~l~------~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 116 YFLL------YESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TTBS------TTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hhcc------cHHHHHHHHHHHHhhcCCCeEEEE
Confidence 3322 222456788899999999999984
|
| >3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=8.8e-05 Score=74.66 Aligned_cols=72 Identities=11% Similarity=0.012 Sum_probs=54.2
Q ss_pred cChHHHHHHHHHcC--C---CcEEeeccccCCC----CC--CCccc-----EEEecCcccccccCh--HHHHHHHhhccc
Q 009719 164 DSHKAQIQFALERG--I---PAFVAMLGTRRLP----FP--AFSFD-----IVHCSRCLIPFTAYN--ATYLIEVDRLLR 225 (527)
Q Consensus 164 D~seaqvq~A~eRg--~---pa~~~v~dae~LP----Fp--D~SFD-----lV~cs~~l~hw~d~~--~~aL~Ei~RVLR 225 (527)
|.++.|++.|+++- . ...+.++|...++ .+ +++|| +|+++.+|||.++.. ..+|+++.++|+
T Consensus 112 D~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~ 191 (277)
T 3giw_A 112 DNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLP 191 (277)
T ss_dssp ECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSC
T ss_pred eCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCC
Confidence 88899999998762 1 2567788877752 22 56777 577888887666643 359999999999
Q ss_pred CCcEEEEecC
Q 009719 226 PGGYLVISGP 235 (527)
Q Consensus 226 PGG~lviS~p 235 (527)
|||+|+++.-
T Consensus 192 PGG~Lvls~~ 201 (277)
T 3giw_A 192 SGSYLAMSIG 201 (277)
T ss_dssp TTCEEEEEEE
T ss_pred CCcEEEEEec
Confidence 9999999864
|
| >2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ... | Back alignment and structure |
|---|
Probab=97.33 E-value=4.1e-05 Score=74.62 Aligned_cols=63 Identities=13% Similarity=0.174 Sum_probs=43.7
Q ss_pred CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC----------------HHHHHHHHHHHhcCC
Q 009719 434 RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS----------------PEVIDKVSRIANTVR 497 (527)
Q Consensus 434 rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~----------------~~~~~~i~~i~~~l~ 497 (527)
.+||+|-+..+|.... .+--+...+|-|+-|+|||||++++.+. .-..+.++++++.--
T Consensus 173 ~~fD~V~~~~~l~~~~-----~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG 247 (289)
T 2g72_A 173 LPADALVSAFCLEAVS-----PDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSG 247 (289)
T ss_dssp SSEEEEEEESCHHHHC-----SSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTT
T ss_pred CCCCEEEehhhhhhhc-----CCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcC
Confidence 6799999998887532 0011356789999999999999999631 012556777776666
Q ss_pred ceeE
Q 009719 498 WTAA 501 (527)
Q Consensus 498 W~~~ 501 (527)
++..
T Consensus 248 f~~~ 251 (289)
T 2g72_A 248 YKVR 251 (289)
T ss_dssp EEEE
T ss_pred CeEE
Confidence 6543
|
| >3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} | Back alignment and structure |
|---|
Probab=97.33 E-value=5.8e-05 Score=70.73 Aligned_cols=110 Identities=11% Similarity=0.048 Sum_probs=67.5
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----ccc---ccc-cccCCCCCCCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLI---GVY-HDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLi---G~~-hdwce~fstYPrtyDLiHa~~~f 445 (527)
..|||+|||.|.++.+|.....-| +-.|-. ..+..+-++ |+- -++ .|..+.+... ..||+|-+...
T Consensus 57 ~~vLDlGcG~G~~~~~la~~~~~v---~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~-~~~D~v~~~~~- 131 (204)
T 3njr_A 57 ELLWDIGGGSGSVSVEWCLAGGRA---ITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL-PLPEAVFIGGG- 131 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCEE---EEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS-CCCSEEEECSC-
T ss_pred CEEEEecCCCCHHHHHHHHcCCEE---EEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC-CCCCEEEECCc-
Confidence 579999999999998886654323 223322 344443332 432 111 2222222222 36888765421
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC-CHHHHHHHHHHHhcCCceeEE
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~i~~i~~~l~W~~~~ 502 (527)
.... ++-|+-|+|||||.+++.. ..+.+.++.++++...+++..
T Consensus 132 ------------~~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~~ 176 (204)
T 3njr_A 132 ------------GSQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQLLR 176 (204)
T ss_dssp ------------CCHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEEE
T ss_pred ------------ccHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEEE
Confidence 1345 8899999999999999986 456677777777766666543
|
| >1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00012 Score=73.93 Aligned_cols=98 Identities=14% Similarity=0.266 Sum_probs=63.8
Q ss_pred cCCCCeeeEeecCCCccchhhhccCC--C--eeEEEecCCCCCCchhHhhhc----cccc----cccccCCCCCCCCCcc
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSD--P--VWVMNVVPARKSSTLSVIYDR----GLIG----VYHDWCEPFSTYPRTY 436 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~--~--VwvMnvvp~~~~ntl~vi~eR----GLiG----~~hdwce~fstYPrty 436 (527)
+......+|+|+|||.|.++.+|.+. . +..+-+ +..+..+-++ |+-+ +-+|..+. .+|. +
T Consensus 186 ~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-----~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~-~ 257 (359)
T 1x19_A 186 AKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-----PGAIDLVNENAAEKGVADRMRGIAVDIYKE--SYPE-A 257 (359)
T ss_dssp CCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-----GGGHHHHHHHHHHTTCTTTEEEEECCTTTS--CCCC-C
T ss_pred cCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-----HHHHHHHHHHHHhcCCCCCEEEEeCccccC--CCCC-C
Confidence 44456689999999999999998643 2 333333 3334443332 5422 22333321 2343 4
Q ss_pred chhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 437 DLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 437 DLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
|+|.+..++-.|. .-....+|-++-|+|+|||.++|-|
T Consensus 258 D~v~~~~vlh~~~-------d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 258 DAVLFCRILYSAN-------EQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp SEEEEESCGGGSC-------HHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred CEEEEechhccCC-------HHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 9999999988774 1124678999999999999998865
|
| >2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=4.7e-05 Score=73.32 Aligned_cols=72 Identities=10% Similarity=0.061 Sum_probs=48.9
Q ss_pred eeEEeeccCcChHHHHHHHHHcCCCcEEeeccccC---CCCCCC-cccEEEecCcccccccChHHHHHHHhh-cccCCcE
Q 009719 155 ILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRR---LPFPAF-SFDIVHCSRCLIPFTAYNATYLIEVDR-LLRPGGY 229 (527)
Q Consensus 155 V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~---LPFpD~-SFDlV~cs~~l~hw~d~~~~aL~Ei~R-VLRPGG~ 229 (527)
|+++++++ .+++.|+.....+.+.++|+.. ||+.++ +||+|++... | .....+|.|+.| +|||||+
T Consensus 112 V~gvD~s~-----~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~--~--~~~~~~l~~~~r~~LkpGG~ 182 (236)
T 2bm8_A 112 VIGIDRDL-----SRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDNA--H--ANTFNIMKWAVDHLLEEGDY 182 (236)
T ss_dssp EEEEESCC-----TTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS--C--SSHHHHHHHHHHHTCCTTCE
T ss_pred EEEEeCCh-----HHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECCc--h--HhHHHHHHHHHHhhCCCCCE
Confidence 44555444 4455554333346677888877 476544 7999998654 4 233349999998 9999999
Q ss_pred EEEecC
Q 009719 230 LVISGP 235 (527)
Q Consensus 230 lviS~p 235 (527)
|++...
T Consensus 183 lv~~d~ 188 (236)
T 2bm8_A 183 FIIEDM 188 (236)
T ss_dssp EEECSC
T ss_pred EEEEeC
Confidence 999753
|
| >3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00015 Score=69.80 Aligned_cols=132 Identities=14% Similarity=0.150 Sum_probs=75.6
Q ss_pred eeeEeecCCCccchhhhccCC---CeeEEEecCCCCC-CchhHhhhc----cccc----cccccCCCCCCCC--Cccchh
Q 009719 374 IRNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKS-STLSVIYDR----GLIG----VYHDWCEPFSTYP--RTYDLI 439 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~-ntl~vi~eR----GLiG----~~hdwce~fstYP--rtyDLi 439 (527)
-++|||+|||.|.++.+|... ..-|. -+|.. ..+..+-++ |+-. +..|..+.++..+ .+||+|
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~---~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLL---TLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEE---EEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEE---EEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 468999999999999888664 22222 22222 334443333 4421 1223333233333 389999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH------------HHHHHHHH----HHhcCCceeEEe
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP------------EVIDKVSR----IANTVRWTAAVH 503 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~------------~~~~~i~~----i~~~l~W~~~~~ 503 (527)
.++.-... ...++-++-|+|||||++|+.+-. .....+++ +...-+|+....
T Consensus 141 ~~d~~~~~------------~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l 208 (248)
T 3tfw_A 141 FIDADKPN------------NPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATAL 208 (248)
T ss_dssp EECSCGGG------------HHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred EECCchHH------------HHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEe
Confidence 87643222 245777888999999999997521 12223333 344556776554
Q ss_pred cCCCCCCCCceEEEEEec
Q 009719 504 DKEPGSNGREKILVATKS 521 (527)
Q Consensus 504 ~~e~~~~~~ekiLi~~K~ 521 (527)
-.- +....+.+.+++|+
T Consensus 209 ~~~-g~~~~DG~~i~~~~ 225 (248)
T 3tfw_A 209 QTV-GTKGWDGFTLAWVN 225 (248)
T ss_dssp EEC-STTCSEEEEEEEEC
T ss_pred ecC-CCCCCCeeEEEEEe
Confidence 111 22345789999885
|
| >3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=97.30 E-value=9.2e-05 Score=70.68 Aligned_cols=67 Identities=18% Similarity=0.179 Sum_probs=48.9
Q ss_pred cChHHHHHHHHHc----CCC---cEEeeccccC-CC-CCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALER----GIP---AFVAMLGTRR-LP-FPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p---a~~~v~dae~-LP-FpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++.+++.|+++ |+. +.+..+|+.. ++ +++++||+|++.....+ ...++.++.|+|||||++++..
T Consensus 88 D~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~~~~~----~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 88 DPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQVSPMD----LKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECCCTTT----HHHHHHHHHHHEEEEEEEEETT
T ss_pred ECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcCcHHH----HHHHHHHHHHHcCCCcEEEEeC
Confidence 7778888888754 554 5566777644 44 45899999998754322 2238999999999999999954
|
| >1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=2.7e-05 Score=75.04 Aligned_cols=100 Identities=15% Similarity=0.069 Sum_probs=61.1
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc---cccc-cccCCCCCC-CCCccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL---IGVY-HDWCEPFST-YPRTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL---iG~~-hdwce~fst-YPrtyDLiHa~~~ 444 (527)
.+|||+|||.|.++..|...+.. +|+-+|-. ..+..+-++ |+ +-+. .|..+ ++. -+.+||+|.+..+
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERAGIG--EYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYG-RHMDLGKEFDVISSQFS 142 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHHTCS--EEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTT-SCCCCSSCEEEEEEESC
T ss_pred CeEEEECCCCCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccc-cccCCCCCcCEEEECch
Confidence 58999999999999888765431 22223322 334433333 32 2222 22222 221 2479999999877
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
+.... .+.-+...+|-|+-|+|+|||.+++...
T Consensus 143 l~~~~-----~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 143 FHYAF-----STSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp GGGGG-----SSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhhhc-----CCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 64310 0122346789999999999999999863
|
| >3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00012 Score=69.57 Aligned_cols=67 Identities=12% Similarity=0.201 Sum_probs=49.8
Q ss_pred cChHHHHHHHHHc----CC--CcEEeeccccC-CC-CCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALER----GI--PAFVAMLGTRR-LP-FPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eR----g~--pa~~~v~dae~-LP-FpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++.+++.|+++ ++ .+.+..+|+.. +| +.+++||+|++.... .....++.++.|+|||||+|++..
T Consensus 102 D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~----~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 102 ERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAAK----AQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp ECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETTS----SSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred ECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcCcH----HHHHHHHHHHHHhcCCCeEEEEee
Confidence 6778888888764 44 35677788754 56 668999999976432 222349999999999999999854
|
| >2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=97.28 E-value=6e-05 Score=70.45 Aligned_cols=66 Identities=20% Similarity=0.154 Sum_probs=51.6
Q ss_pred cChHHHHHHHHHc----C-----C-CcEEeeccccCCC----CCCCcccEEEecCcccccccChHHHHHHHhhcccCCcE
Q 009719 164 DSHKAQIQFALER----G-----I-PAFVAMLGTRRLP----FPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGY 229 (527)
Q Consensus 164 D~seaqvq~A~eR----g-----~-pa~~~v~dae~LP----FpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~ 229 (527)
|.++.+++.|+++ + . .+.+..+|....+ +++++||+|++...++| ++.++.++|||||+
T Consensus 116 D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~-------~~~~~~~~LkpgG~ 188 (227)
T 2pbf_A 116 ERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELGLFDAIHVGASASE-------LPEILVDLLAENGK 188 (227)
T ss_dssp ESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHCCEEEEEECSBBSS-------CCHHHHHHEEEEEE
T ss_pred eCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCCCcCEEEECCchHH-------HHHHHHHhcCCCcE
Confidence 6677888888765 3 2 3567778887766 77889999999987755 35788999999999
Q ss_pred EEEecCC
Q 009719 230 LVISGPP 236 (527)
Q Consensus 230 lviS~pp 236 (527)
++++.++
T Consensus 189 lv~~~~~ 195 (227)
T 2pbf_A 189 LIIPIEE 195 (227)
T ss_dssp EEEEEEE
T ss_pred EEEEEcc
Confidence 9998763
|
| >3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=97.27 E-value=2.4e-05 Score=75.71 Aligned_cols=80 Identities=15% Similarity=0.145 Sum_probs=47.5
Q ss_pred hhccccccccCCe-eEEeeccCcChHHHHHHHHHcCCCcEE------eeccccCCC---CCCCcccEEEecCcccccccC
Q 009719 143 VASFGGSMLSENI-LTLSFAPRDSHKAQIQFALERGIPAFV------AMLGTRRLP---FPAFSFDIVHCSRCLIPFTAY 212 (527)
Q Consensus 143 vgsfga~Ll~r~V-~~msiAp~D~seaqvq~A~eRg~pa~~------~v~dae~LP---FpD~SFDlV~cs~~l~hw~d~ 212 (527)
+|.++..|+.++. .+..+ |.++.|++.|+++...... .......++ |.+.+||++++ ++
T Consensus 48 tG~~t~~la~~g~~~V~gv---Dis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~-----~l--- 116 (232)
T 3opn_A 48 TGGFTDVMLQNGAKLVYAL---DVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFI-----SL--- 116 (232)
T ss_dssp TSHHHHHHHHTTCSEEEEE---CSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSS-----CG---
T ss_pred CCHHHHHHHhcCCCEEEEE---cCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhh-----hH---
Confidence 5666667777764 33333 6667777777775432211 111112222 34455555543 33
Q ss_pred hHHHHHHHhhcccCCcEEEEec
Q 009719 213 NATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 213 ~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
..+|.|+.|+|||||+|++..
T Consensus 117 -~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 117 -DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp -GGTHHHHHHHSCTTCEEEEEE
T ss_pred -HHHHHHHHHhccCCCEEEEEE
Confidence 249999999999999999974
|
| >2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00028 Score=68.59 Aligned_cols=77 Identities=13% Similarity=0.102 Sum_probs=54.1
Q ss_pred eeccCcChHHHHHHHHHcC-------CC--cEEeeccccCC-------CCCCCcccEEEecCccc---------------
Q 009719 159 SFAPRDSHKAQIQFALERG-------IP--AFVAMLGTRRL-------PFPAFSFDIVHCSRCLI--------------- 207 (527)
Q Consensus 159 siAp~D~seaqvq~A~eRg-------~p--a~~~v~dae~L-------PFpD~SFDlV~cs~~l~--------------- 207 (527)
.+...|.++.+++.|+++- +. +.+..+|...+ +|++++||+|+|.--..
T Consensus 62 ~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a 141 (260)
T 2ozv_A 62 EVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEA 141 (260)
T ss_dssp EEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC----------------
T ss_pred eEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHH
Confidence 3444477889999998753 22 45677887776 47899999999972221
Q ss_pred -ccc-cChHHHHHHHhhcccCCcEEEEecC
Q 009719 208 -PFT-AYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 208 -hw~-d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.. .....++.++.++|||||+|++..+
T Consensus 142 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 142 HAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp -----CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 111 1233489999999999999999776
|
| >2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00011 Score=74.71 Aligned_cols=110 Identities=13% Similarity=0.152 Sum_probs=65.3
Q ss_pred HHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCe-eEEEecCCCCCCchhHhh----hccc---cccccccCCCCCC
Q 009719 360 YYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKSSTLSVIY----DRGL---IGVYHDWCEPFST 431 (527)
Q Consensus 360 ~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~ntl~vi~----eRGL---iG~~hdwce~fst 431 (527)
.|.+.+...+....=.+|||+|||.|.++..+...+. -|.-|=+. ..+..+- +.|+ |-+.+.=-+.+ .
T Consensus 37 ~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s---~~~~~a~~~~~~~~l~~~v~~~~~d~~~~-~ 112 (348)
T 2y1w_A 37 TYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAS---TMAQHAEVLVKSNNLTDRIVVIPGKVEEV-S 112 (348)
T ss_dssp HHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECS---THHHHHHHHHHHTTCTTTEEEEESCTTTC-C
T ss_pred HHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCH---HHHHHHHHHHHHcCCCCcEEEEEcchhhC-C
Confidence 3554444333222235899999999999888866553 33333332 1233222 2254 22222111222 2
Q ss_pred CCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 432 YPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 432 YPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
.|..||+|-+..++..+. .-.+...+.++-|+|+|||.+++.
T Consensus 113 ~~~~~D~Ivs~~~~~~~~-------~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 113 LPEQVDIIISEPMGYMLF-------NERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CSSCEEEEEECCCBTTBT-------TTSHHHHHHHGGGGEEEEEEEESC
T ss_pred CCCceeEEEEeCchhcCC-------hHHHHHHHHHHHhhcCCCeEEEEe
Confidence 467899999987776553 123456778999999999999865
|
| >2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00013 Score=73.20 Aligned_cols=66 Identities=14% Similarity=0.027 Sum_probs=45.3
Q ss_pred cChHHHHHHHHHcC----------------CCcEEeeccccCC--CCCCCcccEEEecCcccccccChHHHHHHHhhccc
Q 009719 164 DSHKAQIQFALERG----------------IPAFVAMLGTRRL--PFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLR 225 (527)
Q Consensus 164 D~seaqvq~A~eRg----------------~pa~~~v~dae~L--PFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLR 225 (527)
|.++.+++.|+++. ..+.+..+|+..+ ++++++||+|++... +... ++.++.|+||
T Consensus 137 D~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~-----~~~~-~l~~~~~~Lk 210 (336)
T 2b25_A 137 EVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSLTFDAVALDML-----NPHV-TLPVFYPHLK 210 (336)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-------EEEEEECSS-----STTT-THHHHGGGEE
T ss_pred eCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCCCCeeEEEECCC-----CHHH-HHHHHHHhcC
Confidence 66788888887641 2356677887776 688889999998532 2222 8999999999
Q ss_pred CCcEEEEecC
Q 009719 226 PGGYLVISGP 235 (527)
Q Consensus 226 PGG~lviS~p 235 (527)
|||+|++..+
T Consensus 211 pgG~lv~~~~ 220 (336)
T 2b25_A 211 HGGVCAVYVV 220 (336)
T ss_dssp EEEEEEEEES
T ss_pred CCcEEEEEeC
Confidence 9999999876
|
| >2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00015 Score=71.70 Aligned_cols=135 Identities=16% Similarity=0.240 Sum_probs=81.4
Q ss_pred CCeeeEeecCCCccchhhhccCC--CeeEEEecCCCCCCchhHhhh----ccccc----cccccCCCCCCCCCccchhhh
Q 009719 372 PAIRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKSSTLSVIYD----RGLIG----VYHDWCEPFSTYPRTYDLIHV 441 (527)
Q Consensus 372 ~~iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~ntl~vi~e----RGLiG----~~hdwce~fstYPrtyDLiHa 441 (527)
..-.+|+|+|||.|.++.+|.+. ..-+.. .|-+..+..+-+ .|+-+ +-+|..+. .+|..||+|.+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~---~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~v~~ 238 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFG---VDWASVLEVAKENARIQGVASRYHTIAGSAFEV--DYGNDYDLVLL 238 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEE---EECHHHHHHHHHHHHHHTCGGGEEEEESCTTTS--CCCSCEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEE---EecHHHHHHHHHHHHhcCCCcceEEEecccccC--CCCCCCcEEEE
Confidence 44578999999999999988654 222222 222223333322 24322 22333321 35666999999
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH----------H-----------------HHHHHHHHHh
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP----------E-----------------VIDKVSRIAN 494 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~----------~-----------------~~~~i~~i~~ 494 (527)
..++..+. .-....+|-++-|+|+|||+++|-|.. . ..++++++++
T Consensus 239 ~~~l~~~~-------~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~ 311 (335)
T 2r3s_A 239 PNFLHHFD-------VATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFS 311 (335)
T ss_dssp ESCGGGSC-------HHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHH
T ss_pred cchhccCC-------HHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHH
Confidence 99888763 112357899999999999999886410 0 1456677777
Q ss_pred cCCceeEEecCCCCCCCCceEEEEEec
Q 009719 495 TVRWTAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 495 ~l~W~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
.--++......-.+ ...+++++++
T Consensus 312 ~aGf~~~~~~~~~~---~~~~i~~~~~ 335 (335)
T 2r3s_A 312 NAGFSHSQLHSLPT---TQQQVIVAYK 335 (335)
T ss_dssp HTTCSEEEEECCTT---SSSEEEEEEC
T ss_pred HCCCCeeeEEECCC---CceeEEEecC
Confidence 77776544322222 2367777764
|
| >4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=2.2e-05 Score=77.16 Aligned_cols=96 Identities=9% Similarity=0.146 Sum_probs=58.5
Q ss_pred eEeecCCCccchhhhccC----CCeeEEEecCCCCC-CchhHhhhc----cccccccccCCCCCCCC-CccchhhhcCcc
Q 009719 376 NIMDMNAFFGGFAAALTS----DPVWVMNVVPARKS-STLSVIYDR----GLIGVYHDWCEPFSTYP-RTYDLIHVSGIE 445 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~----~~VwvMnvvp~~~~-ntl~vi~eR----GLiG~~hdwce~fstYP-rtyDLiHa~~~f 445 (527)
+|||+|||+|.++.+|.. .++-|.-| |-. .-|..+-+| |+..-..=.|.-+..+| ..||+|-+..++
T Consensus 73 ~vLDlGcGtG~~~~~la~~~~~~~~~v~gv---D~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~l 149 (261)
T 4gek_A 73 QVYDLGCSLGAATLSVRRNIHHDNCKIIAI---DNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTL 149 (261)
T ss_dssp EEEEETCTTTHHHHHHHHTCCSSSCEEEEE---ESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESCG
T ss_pred EEEEEeCCCCHHHHHHHHhcCCCCCEEEEE---ECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeeee
Confidence 699999999999877743 23333333 322 444443332 43221111222333344 569999987766
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.... .-....+|-||-|+|+|||.+|+.|
T Consensus 150 ~~~~-------~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 150 QFLE-------PSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp GGSC-------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eecC-------chhHhHHHHHHHHHcCCCcEEEEEe
Confidence 5432 1112458899999999999999985
|
| >3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00028 Score=65.31 Aligned_cols=67 Identities=15% Similarity=0.110 Sum_probs=48.5
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccC-CCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++.+++.|+++ ++. +.+..+|+.. +|..++ ||+|++... . .....++.++.|+|||||++++...
T Consensus 88 D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~---~-~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 88 DPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD---V-FNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp ESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT---T-SCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred ECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcCC---h-hhhHHHHHHHHHhcCCCeEEEEECc
Confidence 6678888888754 432 4566777654 476667 999998732 2 2233499999999999999998653
|
| >3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=97.22 E-value=9e-05 Score=74.25 Aligned_cols=138 Identities=12% Similarity=0.153 Sum_probs=84.8
Q ss_pred cCCCC-eeeEeecCCCccchhhhccCC--CeeEEEecCCCCCCchhHhh----hcccc----ccccccCCCCCCCCCccc
Q 009719 369 LGTPA-IRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKSSTLSVIY----DRGLI----GVYHDWCEPFSTYPRTYD 437 (527)
Q Consensus 369 i~~~~-iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~ntl~vi~----eRGLi----G~~hdwce~fstYPrtyD 437 (527)
+.... .++|+|+|||.|.++.+|.+. .+-+..+ |-+..+..+- +.|+- -+-+|..+.-...|..||
T Consensus 174 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D 250 (352)
T 3mcz_A 174 LGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIW---DLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAAD 250 (352)
T ss_dssp CGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEE---ECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEE
T ss_pred CCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEE---ECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCcc
Confidence 34444 789999999999999988543 2332222 2233333332 22432 223333322111467899
Q ss_pred hhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC--------H--H-----------------HHHHHH
Q 009719 438 LIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS--------P--E-----------------VIDKVS 490 (527)
Q Consensus 438 LiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~--------~--~-----------------~~~~i~ 490 (527)
+|.+..++..|. .-....+|-++-|+|+|||.++|-|. . . ..++++
T Consensus 251 ~v~~~~vlh~~~-------~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~ 323 (352)
T 3mcz_A 251 VVMLNDCLHYFD-------AREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIA 323 (352)
T ss_dssp EEEEESCGGGSC-------HHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHH
T ss_pred EEEEecccccCC-------HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHH
Confidence 999999998774 11235789999999999999999641 0 0 133456
Q ss_pred HHHhcCCceeEEecCCCCCCCCceEEEEEec
Q 009719 491 RIANTVRWTAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 491 ~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
++++.--++..... .+...+++++|+
T Consensus 324 ~ll~~aGf~~~~~~-----~g~~~l~~a~kp 349 (352)
T 3mcz_A 324 GVVRDAGLAVGERS-----IGRYTLLIGQRS 349 (352)
T ss_dssp HHHHHTTCEEEEEE-----ETTEEEEEEECC
T ss_pred HHHHHCCCceeeec-----cCceEEEEEecC
Confidence 66666666655421 234678999985
|
| >3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=97.22 E-value=6.6e-05 Score=69.93 Aligned_cols=127 Identities=16% Similarity=0.157 Sum_probs=71.3
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCCCchhHhhh----ccccc---cc-cccCCCCCCCC-----Cccch
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKSSTLSVIYD----RGLIG---VY-HDWCEPFSTYP-----RTYDL 438 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~ntl~vi~e----RGLiG---~~-hdwce~fstYP-----rtyDL 438 (527)
.+|||+|||.|.++.+|... ..-|..|=.. +..+..+-+ .|+-. ++ .|..+.++..+ .+||+
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKDGTLITCDVD--EKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTTCEEEEEESC--HHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCC--HHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 48999999999999988664 3222222111 122333222 24321 11 12222222222 68999
Q ss_pred hhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH------------HHHHHHHHH----HhcCCceeEE
Q 009719 439 IHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP------------EVIDKVSRI----ANTVRWTAAV 502 (527)
Q Consensus 439 iHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~------------~~~~~i~~i----~~~l~W~~~~ 502 (527)
|.++.-.. ....++-++=|+|+|||++++.|-. .....++++ ...-+|+...
T Consensus 144 v~~~~~~~------------~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 211 (225)
T 3tr6_A 144 IYIDADKA------------NTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMIL 211 (225)
T ss_dssp EEECSCGG------------GHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred EEECCCHH------------HHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEE
Confidence 98654322 2345777888999999999998621 112233333 4444677666
Q ss_pred ecCCCCCCCCceEEEEEec
Q 009719 503 HDKEPGSNGREKILVATKS 521 (527)
Q Consensus 503 ~~~e~~~~~~ekiLi~~K~ 521 (527)
... .+.+++++|+
T Consensus 212 lp~------~dG~~~~~k~ 224 (225)
T 3tr6_A 212 IPI------GDGLTLARKK 224 (225)
T ss_dssp ECS------TTCEEEEEEC
T ss_pred EEc------CCccEEEEEC
Confidence 522 3568888885
|
| >3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=6.9e-05 Score=76.42 Aligned_cols=137 Identities=12% Similarity=0.155 Sum_probs=86.5
Q ss_pred ccCCCCeeeEeecCCCccchhhhccCC--C--eeEEEecCCCCCCchhHh----hhcccc----ccccccCCCCCCCCCc
Q 009719 368 KLGTPAIRNIMDMNAFFGGFAAALTSD--P--VWVMNVVPARKSSTLSVI----YDRGLI----GVYHDWCEPFSTYPRT 435 (527)
Q Consensus 368 ~i~~~~iRnvmDm~ag~GgFaAaL~~~--~--VwvMnvvp~~~~ntl~vi----~eRGLi----G~~hdwce~fstYPrt 435 (527)
.+......+|+|+|||.|.++.+|.+. . +.+.-+ +..+..+ -+.|+- =+-+|..++ +|..
T Consensus 197 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-----~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~---~p~~ 268 (369)
T 3gwz_A 197 AYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-----PPVAEEARELLTGRGLADRCEILPGDFFET---IPDG 268 (369)
T ss_dssp HSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-----HHHHHHHHHHHHHTTCTTTEEEEECCTTTC---CCSS
T ss_pred hCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-----HHHHHHHHHhhhhcCcCCceEEeccCCCCC---CCCC
Confidence 445667799999999999999998653 2 333333 2223322 223431 123344433 4568
Q ss_pred cchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH------------H------------HHHHHHH
Q 009719 436 YDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP------------E------------VIDKVSR 491 (527)
Q Consensus 436 yDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~------------~------------~~~~i~~ 491 (527)
||+|-+..++..|. + =....+|-++=|+|+|||+++|-|.. + ..+++++
T Consensus 269 ~D~v~~~~vlh~~~------d-~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ 341 (369)
T 3gwz_A 269 ADVYLIKHVLHDWD------D-DDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAA 341 (369)
T ss_dssp CSEEEEESCGGGSC------H-HHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHH
T ss_pred ceEEEhhhhhccCC------H-HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHH
Confidence 99999999998774 1 11135899999999999999996410 0 1455677
Q ss_pred HHhcCCceeEEecCCCCCCCCceEEEEEec
Q 009719 492 IANTVRWTAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 492 i~~~l~W~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
+++.--++....... ......|+.|+|.
T Consensus 342 ll~~aGf~~~~~~~~--~~~~~svie~~~a 369 (369)
T 3gwz_A 342 LLEKSGLRVERSLPC--GAGPVRIVEIRRA 369 (369)
T ss_dssp HHHTTTEEEEEEEEC--SSSSEEEEEEEEC
T ss_pred HHHHCCCeEEEEEEC--CCCCcEEEEEEeC
Confidence 777777876544221 1234578888763
|
| >1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00022 Score=66.36 Aligned_cols=124 Identities=12% Similarity=0.160 Sum_probs=71.4
Q ss_pred eeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhh----ccc--ccc-ccccCCCCCC-C-CCccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYD----RGL--IGV-YHDWCEPFST-Y-PRTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~e----RGL--iG~-~hdwce~fst-Y-PrtyDLiHa~ 442 (527)
..|||+|||.|.|+.+|... .. +|+-+|-. ..+..+-+ .|+ +-+ ..|..+ ++. + +.+||+|.+.
T Consensus 43 ~~vLDiGcG~G~~~~~la~~~p~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQNPDI---NYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD-LTDYFEDGEIDRLYLN 118 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC-GGGTSCTTCCSEEEEE
T ss_pred CeEEEEccCcCHHHHHHHHHCCCC---CEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCCCCCCEEEEE
Confidence 46999999999999888543 22 23333322 33443333 243 212 233332 321 3 3789999986
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-CHHHHHHHHHHHhcCCceeEEe
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~i~~i~~~l~W~~~~~ 503 (527)
... .|.....++.+=....+|-++-|+|+|||.+++.. ..+....+.+++....|+....
T Consensus 119 ~~~-~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 179 (214)
T 1yzh_A 119 FSD-PWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNGV 179 (214)
T ss_dssp SCC-CCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCC-CccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeeec
Confidence 321 12100000111123568899999999999999974 5566677777766666765443
|
| >1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00017 Score=72.45 Aligned_cols=140 Identities=22% Similarity=0.293 Sum_probs=83.5
Q ss_pred cCCCCeeeEeecCCCccchhhhccCC--CeeEEEecCCCCCCchhHhhh----cccc----ccccccCCCCCCCCCccch
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKSSTLSVIYD----RGLI----GVYHDWCEPFSTYPRTYDL 438 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~ntl~vi~e----RGLi----G~~hdwce~fstYPrtyDL 438 (527)
+....-.+|+|+|||.|.++.+|.+. .+-+..+ |-+..+..+-+ .|+- =+-+|..++ .|..||+
T Consensus 179 ~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~D~ 252 (360)
T 1tw3_A 179 YDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVL---EMAGTVDTARSYLKDEGLSDRVDVVEGDFFEP---LPRKADA 252 (360)
T ss_dssp SCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECTTHHHHHHHHHHHTTCTTTEEEEECCTTSC---CSSCEEE
T ss_pred CCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEe---cCHHHHHHHHHHHHhcCCCCceEEEeCCCCCC---CCCCccE
Confidence 34445678999999999999888543 3333222 11333333332 3331 223444443 4666999
Q ss_pred hhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH--------H------------------HHHHHHHH
Q 009719 439 IHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP--------E------------------VIDKVSRI 492 (527)
Q Consensus 439 iHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~--------~------------------~~~~i~~i 492 (527)
+-+..++..|. + =....+|-++-|+|+|||.++|.+.. . ..++++++
T Consensus 253 v~~~~vl~~~~------~-~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l 325 (360)
T 1tw3_A 253 IILSFVLLNWP------D-HDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGL 325 (360)
T ss_dssp EEEESCGGGSC------H-HHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHH
T ss_pred EEEcccccCCC------H-HHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHH
Confidence 99998887664 1 11246899999999999999986532 0 12456667
Q ss_pred HhcCCceeEEecCCCCC--CCCceEEEEEec
Q 009719 493 ANTVRWTAAVHDKEPGS--NGREKILVATKS 521 (527)
Q Consensus 493 ~~~l~W~~~~~~~e~~~--~~~ekiLi~~K~ 521 (527)
++.--++......-.+. .-...|+.++|.
T Consensus 326 l~~aGf~~~~~~~~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 326 AASAGLVVEEVRQLPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp HHHTTEEEEEEEEEECSSSSCEEEEEEEEEC
T ss_pred HHHCCCeEEEEEeCCCCcccCccEEEEEEeC
Confidence 77777775433211111 011568888874
|
| >2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0003 Score=71.62 Aligned_cols=90 Identities=12% Similarity=0.045 Sum_probs=60.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC---cEEeeccccCCC-C---CCCcccEEEecCc------
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP---AFVAMLGTRRLP-F---PAFSFDIVHCSRC------ 205 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p---a~~~v~dae~LP-F---pD~SFDlV~cs~~------ 205 (527)
+|.++-++..++..+ ...|.++.+++.|+++ ++. +.+.++|+..+. . .+++||+|++.--
T Consensus 164 tG~~sl~la~~ga~V---~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~ 240 (332)
T 2igt_A 164 TGVASLVAAAAGAEV---THVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGT 240 (332)
T ss_dssp TCHHHHHHHHTTCEE---EEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECT
T ss_pred cCHHHHHHHHcCCEE---EEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCc
Confidence 566666677777643 3448889999988764 443 567778876543 2 1679999998421
Q ss_pred ---ccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 206 ---LIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 206 ---l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.++.+....++.++.|+|||||+|+++..
T Consensus 241 ~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~ 273 (332)
T 2igt_A 241 HGEVWQLFDHLPLMLDICREILSPKALGLVLTA 273 (332)
T ss_dssp TCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEC
Confidence 112222333489999999999999887664
|
| >3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00042 Score=70.13 Aligned_cols=72 Identities=19% Similarity=0.127 Sum_probs=54.4
Q ss_pred cChHHHHHHHHHc----CC-CcEEeeccccCCCCCCCcccEEEecCccc-------ccccChHHHHHHHhhcccCCcEEE
Q 009719 164 DSHKAQIQFALER----GI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLI-------PFTAYNATYLIEVDRLLRPGGYLV 231 (527)
Q Consensus 164 D~seaqvq~A~eR----g~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~-------hw~d~~~~aL~Ei~RVLRPGG~lv 231 (527)
|.++.+++.|+++ |+ .+.+.++|+..+|++.++||+|+|.--.. ++.+.-..++.++.|+|||||+++
T Consensus 235 Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~ 314 (354)
T 3tma_A 235 DLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVA 314 (354)
T ss_dssp ESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEE
T ss_pred ECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEE
Confidence 6677888888754 55 36788899999999989999999953221 111111348999999999999999
Q ss_pred EecC
Q 009719 232 ISGP 235 (527)
Q Consensus 232 iS~p 235 (527)
+.++
T Consensus 315 i~t~ 318 (354)
T 3tma_A 315 LLTL 318 (354)
T ss_dssp EEES
T ss_pred EEeC
Confidence 9887
|
| >3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00059 Score=63.61 Aligned_cols=136 Identities=11% Similarity=0.113 Sum_probs=68.1
Q ss_pred eeEeecCCCccchhhhccCCCeeE--EEecCCCCCCchhHhhhccccccccccCCCCCC-------CC----Cccchhhh
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWV--MNVVPARKSSTLSVIYDRGLIGVYHDWCEPFST-------YP----RTYDLIHV 441 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~Vwv--Mnvvp~~~~ntl~vi~eRGLiG~~hdwce~fst-------YP----rtyDLiHa 441 (527)
.+|||+|||.|+|+..|.+..--| +-+.|..... |+-=+..|..+. .+ ++ .+||+|-+
T Consensus 27 ~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~~~--------~v~~~~~D~~~~-~~~~~~~~~~~~~~~~~~D~Vls 97 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEEIA--------GVRFIRCDIFKE-TIFDDIDRALREEGIEKVDDVVS 97 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCCCT--------TCEEEECCTTSS-SHHHHHHHHHHHHTCSSEEEEEE
T ss_pred CEEEEEeecCCHHHHHHHHcCCcEEEEeccccccCC--------CeEEEEccccCH-HHHHHHHHHhhcccCCcceEEec
Confidence 689999999999999998775333 3444432111 221122232221 10 11 37999887
Q ss_pred cCccccccC--CCCCCCCCcccccceeecccccCCcEEEEeC--CHHHHHHHHHHHhcCCcee-EEe-cCCCCCCCCceE
Q 009719 442 SGIESLIKN--PGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD--SPEVIDKVSRIANTVRWTA-AVH-DKEPGSNGREKI 515 (527)
Q Consensus 442 ~~~fs~~~~--~~~~~~rC~~~~illEmDRILRP~G~~iird--~~~~~~~i~~i~~~l~W~~-~~~-~~e~~~~~~eki 515 (527)
+.-...... .......-..+.+|-++-|+|||||.+++.- ..+ ...+...++.. ++. .+. ..-+-+...|..
T Consensus 98 d~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~-~~~~~~~l~~~-F~~v~~~kP~asR~~s~E~y 175 (191)
T 3dou_A 98 DAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM-TNDFIAIWRKN-FSSYKISKPPASRGSSSEIY 175 (191)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH-HHHHHHHHGGG-EEEEEEECC------CCEEE
T ss_pred CCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC-HHHHHHHHHHh-cCEEEEECCCCccCCCceEE
Confidence 642210000 0000000012356778889999999999753 222 23344444432 332 222 223334457899
Q ss_pred EEEEec
Q 009719 516 LVATKS 521 (527)
Q Consensus 516 Li~~K~ 521 (527)
+||++.
T Consensus 176 ~v~~~~ 181 (191)
T 3dou_A 176 IMFFGF 181 (191)
T ss_dssp EEEEEE
T ss_pred EEEeee
Confidence 998763
|
| >3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=97.16 E-value=6.5e-05 Score=74.57 Aligned_cols=96 Identities=10% Similarity=-0.033 Sum_probs=61.9
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcccc-ccccccCCC-C---CCCCCccchhhhcCccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGLI-GVYHDWCEP-F---STYPRTYDLIHVSGIESLI 448 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGLi-G~~hdwce~-f---stYPrtyDLiHa~~~fs~~ 448 (527)
..|||+|||.|.++..|.++.- .|+-+|.. .-|..+-++--- .+-.+|.+. + ...+.+||+|-++.++.++
T Consensus 47 ~~VLDlGcGtG~~a~~La~~g~---~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~ 123 (261)
T 3iv6_A 47 STVAVIGASTRFLIEKALERGA---SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLNDRLINRF 123 (261)
T ss_dssp CEEEEECTTCHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCGGGS
T ss_pred CEEEEEeCcchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEhhhhHhC
Confidence 5799999999999999976643 23333433 445544443210 122233221 1 1124689999999887765
Q ss_pred cCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 449 KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 449 ~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
. .=....+|-+|-|+| |||.++++-
T Consensus 124 ~-------~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 124 T-------TEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp C-------HHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred C-------HHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 3 123456899999999 999999983
|
| >1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A | Back alignment and structure |
|---|
Probab=97.16 E-value=9.6e-05 Score=69.21 Aligned_cols=129 Identities=15% Similarity=0.239 Sum_probs=69.0
Q ss_pred eeEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhh----hc-cccccccccCCC--CCCCCCccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIY----DR-GLIGVYHDWCEP--FSTYPRTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~----eR-GLiG~~hdwce~--fstYPrtyDLiHa~ 442 (527)
.+|||+|||.|.++.+|.+. .|..+-+.| ..+..+. ++ ++--+..|..+. +...+.+||+|-++
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~----~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSP----RVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCH----HHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCH----HHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 47999999999999888643 344333322 1111111 11 221122233331 12235689999875
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC---------HH-H-HHHHHHHHhcCCceeEE-ecCCCCCC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS---------PE-V-IDKVSRIANTVRWTAAV-HDKEPGSN 510 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~---------~~-~-~~~i~~i~~~l~W~~~~-~~~e~~~~ 510 (527)
.. .. + ....++-++-|+|+|||++++.-. .. + -++++++ ..- ++... .+.++..
T Consensus 151 ~~-~~--------~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~~~~~~~- 216 (227)
T 1g8a_A 151 VA-QP--------T--QAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERLNLEPYE- 216 (227)
T ss_dssp CC-ST--------T--HHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEEECTTTS-
T ss_pred CC-CH--------h--HHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEeccCccc-
Confidence 33 10 1 113458899999999999998511 11 1 2456666 333 77543 3433222
Q ss_pred CCceEEEEEec
Q 009719 511 GREKILVATKS 521 (527)
Q Consensus 511 ~~ekiLi~~K~ 521 (527)
...-+++++|+
T Consensus 217 ~~~~~~~~~~~ 227 (227)
T 1g8a_A 217 KDHALFVVRKT 227 (227)
T ss_dssp SSEEEEEEECC
T ss_pred CCCEEEEEEeC
Confidence 23447777774
|
| >1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00036 Score=65.50 Aligned_cols=65 Identities=14% Similarity=0.217 Sum_probs=49.4
Q ss_pred cChHHHHHHHHHcC----------CCcEEeeccccCCCCCC-CcccEEEecCcccccccChHHHHHHHhhcccCCcEEEE
Q 009719 164 DSHKAQIQFALERG----------IPAFVAMLGTRRLPFPA-FSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 164 D~seaqvq~A~eRg----------~pa~~~v~dae~LPFpD-~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lvi 232 (527)
|.++.+++.|+++. ..+.+..+|... ++++ ++||+|++...++|. +.++.++|||||++++
T Consensus 121 D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~I~~~~~~~~~-------~~~~~~~LkpgG~lvi 192 (227)
T 1r18_A 121 EHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNAPYNAIHVGAAAPDT-------PTELINQLASGGRLIV 192 (227)
T ss_dssp ESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGCSEEEEEECSCBSSC-------CHHHHHTEEEEEEEEE
T ss_pred EcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCCCccEEEECCchHHH-------HHHHHHHhcCCCEEEE
Confidence 66778888877541 135566777765 6765 899999999887664 3789999999999999
Q ss_pred ecCC
Q 009719 233 SGPP 236 (527)
Q Consensus 233 S~pp 236 (527)
+..+
T Consensus 193 ~~~~ 196 (227)
T 1r18_A 193 PVGP 196 (227)
T ss_dssp EESC
T ss_pred EEec
Confidence 8763
|
| >2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00045 Score=70.17 Aligned_cols=66 Identities=14% Similarity=0.094 Sum_probs=50.5
Q ss_pred HHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 169 QIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 169 qvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|++.|+++ ++ .+.+..++.+.++++ ++||+|+|..++.|+.... ...+.++.|+|||||.++++..
T Consensus 84 ~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (348)
T 2y1w_A 84 MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIG 156 (348)
T ss_dssp HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCEE
T ss_pred HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEecC
Confidence 55555543 54 356778888888887 6899999998888886543 3488899999999999997643
|
| >2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00011 Score=74.57 Aligned_cols=110 Identities=15% Similarity=0.114 Sum_probs=62.2
Q ss_pred HHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCe-eEEEecCCCCCCchhHh----hhccc---cccccccCCCCC
Q 009719 359 AYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKSSTLSVI----YDRGL---IGVYHDWCEPFS 430 (527)
Q Consensus 359 ~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~ntl~vi----~eRGL---iG~~hdwce~fs 430 (527)
..|.+.+...+....=..|||+|||.|.++..+.+.+. -|..|=.. ..+..+ -+.|+ |-+++.=.+.+
T Consensus 50 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s---~~~~~a~~~~~~~~~~~~i~~~~~d~~~~- 125 (340)
T 2fyt_A 50 ESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQS---EILYQAMDIIRLNKLEDTITLIKGKIEEV- 125 (340)
T ss_dssp HHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESS---THHHHHHHHHHHTTCTTTEEEEESCTTTS-
T ss_pred HHHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChH---HHHHHHHHHHHHcCCCCcEEEEEeeHHHh-
Confidence 44555444332222234899999999999888866543 23333322 123322 22344 22222212223
Q ss_pred CCC-CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEE
Q 009719 431 TYP-RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVV 478 (527)
Q Consensus 431 tYP-rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~i 478 (527)
.+| ..||+|-+..+..... ..-.+..+|-++.|+|+|||.+|
T Consensus 126 ~~~~~~~D~Ivs~~~~~~l~------~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 126 HLPVEKVDVIISEWMGYFLL------FESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CCSCSCEEEEEECCCBTTBT------TTCHHHHHHHHHHHHEEEEEEEE
T ss_pred cCCCCcEEEEEEcCchhhcc------CHHHHHHHHHHHHhhcCCCcEEE
Confidence 245 7899999875322111 11234568889999999999998
|
| >2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=7.6e-05 Score=72.94 Aligned_cols=118 Identities=15% Similarity=0.075 Sum_probs=72.3
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc-cc-------------------cccccccCCCCCCCC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR-GL-------------------IGVYHDWCEPFSTYP 433 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR-GL-------------------iG~~hdwce~fstYP 433 (527)
..|||+|||.|.++..|.+... +|+-+|-. .-+..+.++ ++ -+-..=.|.-+...|
T Consensus 70 ~~vLD~GCG~G~~~~~La~~G~---~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADRGH---TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHTTC---EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CeEEEeCCCCcHHHHHHHHCCC---eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 4799999999999999988765 34444543 444444332 11 000111122222222
Q ss_pred ----CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC---------CH---HHHHHHHHHHhcCC
Q 009719 434 ----RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD---------SP---EVIDKVSRIANTVR 497 (527)
Q Consensus 434 ----rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird---------~~---~~~~~i~~i~~~l~ 497 (527)
.+||+|-+..+|.... ......++-||-|+|||||.+++-. .. -..+++++++.. .
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~-------~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~ 218 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAIN-------PGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-K 218 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSC-------GGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-T
T ss_pred cccCCCEEEEEEhhhhhhCC-------HHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-C
Confidence 6899999887776542 2234568899999999999996421 00 124667777766 4
Q ss_pred ceeEEe
Q 009719 498 WTAAVH 503 (527)
Q Consensus 498 W~~~~~ 503 (527)
|++...
T Consensus 219 f~v~~~ 224 (252)
T 2gb4_A 219 CSMQCL 224 (252)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 877544
|
| >2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.12 E-value=8.7e-05 Score=70.05 Aligned_cols=134 Identities=15% Similarity=0.153 Sum_probs=71.0
Q ss_pred eeEeecCCCccchhhhccCC--C-eeEEEecCCCC--CCchhHhhhc-cccccccccCCC--CCCCCCccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSD--P-VWVMNVVPARK--SSTLSVIYDR-GLIGVYHDWCEP--FSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~-VwvMnvvp~~~--~ntl~vi~eR-GLiG~~hdwce~--fstYPrtyDLiHa~~~fs 446 (527)
..|||+|||.|.|+..|.+. + --|.-|=.... ...+..+-++ ++--+..|..+. ++..+.+||+|.++.. .
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~-~ 157 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVA-Q 157 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCC-C
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCC-C
Confidence 47999999999999988654 2 22322211100 0112222222 222223333331 2222468999998532 1
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeCCHH----------HHHHHHHHHhcCCceeEE-ecCCCCCCCCceE
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPE----------VIDKVSRIANTVRWTAAV-HDKEPGSNGREKI 515 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~----------~~~~i~~i~~~l~W~~~~-~~~e~~~~~~eki 515 (527)
.. ....++.|+-|+|+|||.+++.-... ++.+-.++++..-++... .+.+..+ ...-+
T Consensus 158 ~~----------~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~-~~~~~ 226 (233)
T 2ipx_A 158 PD----------QTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYE-RDHAV 226 (233)
T ss_dssp TT----------HHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEECTTTS-SSEEE
T ss_pred cc----------HHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEecCCcc-CCcEE
Confidence 10 11334667999999999999963221 122223556666777654 3444333 23456
Q ss_pred EEEEe
Q 009719 516 LVATK 520 (527)
Q Consensus 516 Li~~K 520 (527)
++++|
T Consensus 227 v~~~~ 231 (233)
T 2ipx_A 227 VVGVY 231 (233)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66665
|
| >2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00019 Score=67.59 Aligned_cols=67 Identities=12% Similarity=0.135 Sum_probs=50.4
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccC-CCCC--CCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRR-LPFP--AFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~-LPFp--D~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++.+++.|+++ |.. +.+..+|+.. +|.. +++||+|++..... ....+|.++.|+|||||+++++.
T Consensus 85 D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~----~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 85 ERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDAAKG----QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp CCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEGGGS----CHHHHHHHHGGGEEEEEEEEEET
T ss_pred ECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECCCHH----HHHHHHHHHHHHcCCCeEEEEEc
Confidence 7778888888765 542 5666777655 3654 68999999876542 23349999999999999999975
|
| >4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00023 Score=69.74 Aligned_cols=68 Identities=13% Similarity=0.091 Sum_probs=48.2
Q ss_pred cChHHHHHHHHHcC--CC-cEEeecc---ccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALERG--IP-AFVAMLG---TRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eRg--~p-a~~~v~d---ae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++.|++.|+++. .+ .....++ .+..|+.+++||+|++... | ++....++.|+.|+|||||+++++.
T Consensus 109 D~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~--~-~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 109 EFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADVA--Q-PEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp ECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEECCC--C-TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEecc--C-ChhHHHHHHHHHHhccCCCEEEEEE
Confidence 66778888887653 22 2333333 3567888999999997632 2 2334459999999999999999974
|
| >3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0004 Score=66.99 Aligned_cols=130 Identities=8% Similarity=0.161 Sum_probs=73.6
Q ss_pred eeeEeecCCCccchhhhccC-----CCeeEEEecCCCCCCchhHhhhcccc---cccc-ccCCCCCCC-----CCccchh
Q 009719 374 IRNIMDMNAFFGGFAAALTS-----DPVWVMNVVPARKSSTLSVIYDRGLI---GVYH-DWCEPFSTY-----PRTYDLI 439 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~-----~~VwvMnvvp~~~~ntl~vi~eRGLi---G~~h-dwce~fstY-----PrtyDLi 439 (527)
-++|||+|||.|.++.+|.. -.|..+-+-|.-....-+.+-..|+- -+.+ |-.+.++.. +.+||+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 46899999999998887754 23444444443222222333333542 1111 222222222 4789999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH------------HHHHHHHHH----HhcCCceeEEe
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP------------EVIDKVSRI----ANTVRWTAAVH 503 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~------------~~~~~i~~i----~~~l~W~~~~~ 503 (527)
.++.....+ ..++-++-|+|||||.+++.|-. .....++++ ...=++++.+.
T Consensus 141 ~~d~~~~~~------------~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l 208 (242)
T 3r3h_A 141 FIDADKTNY------------LNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLL 208 (242)
T ss_dssp EEESCGGGH------------HHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEE
T ss_pred EEcCChHHh------------HHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEE
Confidence 876443322 34677888999999999997521 122233333 33445666655
Q ss_pred cCCCCCCCCceEEEEEec
Q 009719 504 DKEPGSNGREKILVATKS 521 (527)
Q Consensus 504 ~~e~~~~~~ekiLi~~K~ 521 (527)
.. .+.+++++|+
T Consensus 209 p~------~dG~~~~~k~ 220 (242)
T 3r3h_A 209 AI------ADGMFLVQPI 220 (242)
T ss_dssp SS------SSCEEEEEEC
T ss_pred Ec------cCceEEEEEc
Confidence 22 3578888875
|
| >2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15 | Back alignment and structure |
|---|
Probab=97.09 E-value=7.8e-05 Score=72.17 Aligned_cols=43 Identities=12% Similarity=0.056 Sum_probs=33.0
Q ss_pred CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 434 RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 434 rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.+||+|-++.++.... .+.=++..+|-||-|+|+|||++|+++
T Consensus 155 ~~fD~V~~~~~l~~i~-----~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 155 PLADCVLTLLAMECAC-----CSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp CCEEEEEEESCHHHHC-----SSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCCEeeehHHHHHhc-----CCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 5899999998886431 011234578899999999999999995
|
| >1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00058 Score=63.83 Aligned_cols=68 Identities=9% Similarity=0.022 Sum_probs=46.2
Q ss_pred cChHHHHHHHHHcC---CCcEEeeccccCC---CCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALERG---IPAFVAMLGTRRL---PFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eRg---~pa~~~v~dae~L---PFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++.+++.++++. ..+.+..+|+... +..+++||+|++... ..+....++.++.|+|||||+++++.
T Consensus 105 D~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 105 EFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp ESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC---STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 66777777776542 2355667777652 222468999998654 22222335999999999999999974
|
| >2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus} | Back alignment and structure |
|---|
Probab=97.09 E-value=7.5e-05 Score=74.82 Aligned_cols=100 Identities=9% Similarity=0.091 Sum_probs=59.8
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----ccc------c-cc-cccC------CCCC-CCC-
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLI------G-VY-HDWC------EPFS-TYP- 433 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLi------G-~~-hdwc------e~fs-tYP- 433 (527)
..|||+|||.|+.+..+...... +|+=+|-. .-|..+-+| |+- . .| ...+ +.+. .+|
T Consensus 50 ~~VLDlGCG~G~~l~~~~~~~~~--~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFYGEIA--LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp CEEEETTCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CeEEEEecCCcHhHHHHHhcCCC--eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 57999999999977766544433 33444433 455555444 210 0 01 1111 2111 134
Q ss_pred CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 434 RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 434 rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
.+||+|-|..++-... +.-....+|-||-|+|||||++|+...
T Consensus 128 ~~FD~V~~~~~lhy~~------~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSF------HPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp SCEEEEEEESCGGGTC------STTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeeEEEECchHHHhC------CHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 8999998876543211 001346899999999999999999863
|
| >2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54 | Back alignment and structure |
|---|
Probab=97.09 E-value=7.8e-05 Score=71.15 Aligned_cols=71 Identities=11% Similarity=0.222 Sum_probs=44.8
Q ss_pred CcChHHHHHHHHHc----CCC--cEEeeccccCC---CCC---CCcccEEEecCcccccc--------------cChHHH
Q 009719 163 RDSHKAQIQFALER----GIP--AFVAMLGTRRL---PFP---AFSFDIVHCSRCLIPFT--------------AYNATY 216 (527)
Q Consensus 163 ~D~seaqvq~A~eR----g~p--a~~~v~dae~L---PFp---D~SFDlV~cs~~l~hw~--------------d~~~~a 216 (527)
.|.++.+++.|+++ ++. +.+..+|+..+ +++ +++||+|+|.--.++.. .+...+
T Consensus 95 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l 174 (254)
T 2h00_A 95 TEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVN 174 (254)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC-----------------------
T ss_pred EECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHH
Confidence 37778888888764 443 56777787652 566 37999999985443332 011225
Q ss_pred HHHHhhcccCCcEEEEe
Q 009719 217 LIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS 233 (527)
+.++.|+|||||.+.+.
T Consensus 175 ~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 175 TGGITEIMAEGGELEFV 191 (254)
T ss_dssp --CTTTTHHHHTHHHHH
T ss_pred hhhHHHHEecCCEEEEE
Confidence 78999999999988764
|
| >3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.001 Score=65.18 Aligned_cols=84 Identities=11% Similarity=0.127 Sum_probs=59.2
Q ss_pred hhccccccccCC--eeEEeeccCcChHHHHHHHHHc----CC-CcEEeeccccCCCCCCCcccEEEecCcccccccChHH
Q 009719 143 VASFGGSMLSEN--ILTLSFAPRDSHKAQIQFALER----GI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNAT 215 (527)
Q Consensus 143 vgsfga~Ll~r~--V~~msiAp~D~seaqvq~A~eR----g~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~ 215 (527)
+|.|+..|..+. ..+..+ |.++.+++.|+++ ++ ...+..+|+..+|. +++||+|++.... +.. .
T Consensus 130 ~G~~s~~la~~~~~~~V~~v---D~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~----~~~-~ 200 (272)
T 3a27_A 130 IGYFTIPLAKYSKPKLVYAI---EKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH----KTH-K 200 (272)
T ss_dssp TTTTHHHHHHHTCCSEEEEE---ECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS----SGG-G
T ss_pred CCHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc----cHH-H
Confidence 566666666542 122233 6677788777653 44 35677788887765 7899999987543 223 3
Q ss_pred HHHHHhhcccCCcEEEEecC
Q 009719 216 YLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p 235 (527)
++.++.|+|||||.++++..
T Consensus 201 ~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 201 FLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp GHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEEc
Confidence 89999999999999999875
|
| >3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=97.07 E-value=3.2e-05 Score=72.99 Aligned_cols=97 Identities=14% Similarity=-0.020 Sum_probs=59.7
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc----ccccccccCCC-C-CCCC--CccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG----LIGVYHDWCEP-F-STYP--RTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG----LiG~~hdwce~-f-stYP--rtyDLiHa~~~f 445 (527)
..|||+|||.|.++..|.+..- +|+-+|.. ..+..+-++- +--+..|..+. + ..++ ..||+|.+..++
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~ 134 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGF 134 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSS
T ss_pred CeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcchh
Confidence 4699999999999998865432 33333333 4444444432 11111222210 0 0011 238999998888
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.... .-....+|-|+-|+|+|||+++|.+
T Consensus 135 ~~~~-------~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 135 HHIP-------VEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp TTSC-------GGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hcCC-------HHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 7552 2235689999999999999988875
|
| >3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00051 Score=67.26 Aligned_cols=97 Identities=12% Similarity=0.051 Sum_probs=62.1
Q ss_pred hhcccccccc--CC-eeEEeeccCcChHHHHHHHHHc----CC-CcEEeeccccCCCC----CCCcccEEEecC------
Q 009719 143 VASFGGSMLS--EN-ILTLSFAPRDSHKAQIQFALER----GI-PAFVAMLGTRRLPF----PAFSFDIVHCSR------ 204 (527)
Q Consensus 143 vgsfga~Ll~--r~-V~~msiAp~D~seaqvq~A~eR----g~-pa~~~v~dae~LPF----pD~SFDlV~cs~------ 204 (527)
.|.++.+|.. .+ ..++.+ |.++.+++.++++ |+ .+.+..+|+..++. ++++||+|++.-
T Consensus 94 ~G~~t~~la~~~~~~~~v~av---D~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g 170 (274)
T 3ajd_A 94 PGGKTTHLAQLMKNKGTIVAV---EISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLDAPCSGNI 170 (274)
T ss_dssp TCHHHHHHHHHTTTCSEEEEE---ESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEEECCC---
T ss_pred ccHHHHHHHHHcCCCCEEEEE---CCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEEcCCCCCCc
Confidence 4555555554 23 222223 6677888777654 55 35677788877765 378999999751
Q ss_pred ccc-----------ccccChHHHHHHHhhcccCCcEEEEecCCCCCCCc
Q 009719 205 CLI-----------PFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQ 242 (527)
Q Consensus 205 ~l~-----------hw~d~~~~aL~Ei~RVLRPGG~lviS~pp~~~~~~ 242 (527)
.+. +.......+|.++.|+|||||++++++.......+
T Consensus 171 ~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~en 219 (274)
T 3ajd_A 171 IKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEEN 219 (274)
T ss_dssp ---------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSS
T ss_pred ccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHh
Confidence 111 11133345899999999999999999875554433
|
| >2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=7.6e-05 Score=74.29 Aligned_cols=84 Identities=14% Similarity=0.062 Sum_probs=55.2
Q ss_pred hhccccccccC-CeeEEeeccCcChHHHHHHHHHcCC-------CcEEe--eccccCCCCCCCcccEEEecCcccccc--
Q 009719 143 VASFGGSMLSE-NILTLSFAPRDSHKAQIQFALERGI-------PAFVA--MLGTRRLPFPAFSFDIVHCSRCLIPFT-- 210 (527)
Q Consensus 143 vgsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eRg~-------pa~~~--v~dae~LPFpD~SFDlV~cs~~l~hw~-- 210 (527)
.|.|+.+|..+ .|+++++++ +. ..|.++.. .+.+. ++|+..|| +++||+|+|..+ .+..
T Consensus 93 tG~~s~~la~~~~V~gVD~s~-m~-----~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd~~-~~~~~~ 163 (276)
T 2wa2_A 93 RGSWSYYAASQPNVREVKAYT-LG-----TSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCDIG-ESNPTA 163 (276)
T ss_dssp TCHHHHHHHTSTTEEEEEEEC-CC-----CTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEECCC-CCCSCH
T ss_pred CCHHHHHHHHcCCEEEEECch-hh-----hhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEECCC-cCCCch
Confidence 56666666654 577777776 31 11222221 34666 78888877 789999999866 2211
Q ss_pred --cChH--HHHHHHhhcccCCc--EEEEecC
Q 009719 211 --AYNA--TYLIEVDRLLRPGG--YLVISGP 235 (527)
Q Consensus 211 --d~~~--~aL~Ei~RVLRPGG--~lviS~p 235 (527)
+... .+|.++.|+||||| .|++..-
T Consensus 164 ~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 164 AVEASRTLTVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred hhhHHHHHHHHHHHHHHhccCCCcEEEEEeC
Confidence 1111 27999999999999 9998653
|
| >2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00017 Score=71.35 Aligned_cols=139 Identities=15% Similarity=0.128 Sum_probs=68.9
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCC--CC-CchhH-hhhcccccc--ccccCCCCCCCCCccchhhhcCcccc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPAR--KS-STLSV-IYDRGLIGV--YHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~--~~-ntl~v-i~eRGLiG~--~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
..|||+|||.|+|+..|.+. .|.-+-+-|.. +. +.+.. .+..++.-+ -.|-. .++ +.+||+|-|+..+..
T Consensus 76 ~~VLDlGcGtG~~s~~la~~~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~-~l~--~~~fD~V~sd~~~~~ 152 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAASRPHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIH-TLP--VERTDVIMCDVGESS 152 (265)
T ss_dssp EEEEEESCTTSHHHHHHHTSTTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTT-TSC--CCCCSEEEECCCCCC
T ss_pred CEEEEeCcCCCHHHHHHHHcCcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHh-HCC--CCCCcEEEEeCcccC
Confidence 58999999999998887664 45555555531 00 10000 000011111 11222 132 589999998744210
Q ss_pred ccCCCCCCCCCcccccceeecccccCCc--EEEEeC----CHHHHHHHHHHHhcCCceeEEecCCCCCCCCceEEEEEe
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEG--TVVVRD----SPEVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATK 520 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G--~~iird----~~~~~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K 520 (527)
-. ...+.=....+|-++.|+|+||| .+++.. ..++++.++.+.+.+. .+.+...-.-....|..+||.+
T Consensus 153 ~~---~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~~~~~~~l~~l~~~f~-~v~~~k~~sR~~s~E~y~v~~~ 227 (265)
T 2oxt_A 153 PK---WSVESERTIKILELLEKWKVKNPSADFVVKVLCPYSVEVMERLSVMQRKWG-GGLVRNPYSRNSTHEMYFTSRA 227 (265)
T ss_dssp SC---HHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHHHHHHHHHHC-CEEECCTTSCTTCCCEEEESSC
T ss_pred Cc---cchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCChhHHHHHHHHHHHcC-CEEEEEecccCCCccEEEEecC
Confidence 00 00000000126778999999999 999863 3433344444433221 2223322222334677777643
|
| >3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.04 E-value=4.8e-05 Score=75.03 Aligned_cols=46 Identities=22% Similarity=0.373 Sum_probs=33.1
Q ss_pred CCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 433 PRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 433 PrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+.+||+|.|..++.... .....-.+..++-++-|+|||||++|+..
T Consensus 175 ~~~fD~I~~~~vl~~ih---l~~~~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 175 TPEYDVVLCLSLTKWVH---LNWGDEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp CCCEEEEEEESCHHHHH---HHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCcCEEEEChHHHHhh---hcCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 58999999988763220 00012245678999999999999999974
|
| >3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E* | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00014 Score=70.92 Aligned_cols=135 Identities=12% Similarity=0.149 Sum_probs=68.5
Q ss_pred eeEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhhhc-cccccccccCCCC--CCCCCccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIYDR-GLIGVYHDWCEPF--STYPRTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~eR-GLiG~~hdwce~f--stYPrtyDLiHa~~~fs 446 (527)
-.|||+|||.|++++.|.+. .|.-+-+-|.-...-+..+-+| .+.-+..|=.++. ...+..||+|.++-.+
T Consensus 78 ~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~- 156 (232)
T 3id6_C 78 TKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQ- 156 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECCCC-
T ss_pred CEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecCCC-
Confidence 57999999999999877542 2443333221000112223333 2333444433321 1124579998776322
Q ss_pred cccCCCCCCCCCcccccce-eecccccCCcEEEEeC----------CHHHHHHHHHHHhcCCceeE-EecCCCCCCCCce
Q 009719 447 LIKNPGSNKNSCSLVDLMV-EMDRMLRPEGTVVVRD----------SPEVIDKVSRIANTVRWTAA-VHDKEPGSNGREK 514 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~ill-EmDRILRP~G~~iird----------~~~~~~~i~~i~~~l~W~~~-~~~~e~~~~~~ek 514 (527)
.+...+|+ .+.|.|+|||.+++.- ..++...+.+.+++--.+.. ..+.|+... ..-
T Consensus 157 -----------~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p~~~-~h~ 224 (232)
T 3id6_C 157 -----------PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDPYDK-DHA 224 (232)
T ss_dssp -----------TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEECTTTCS-SCE
T ss_pred -----------hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEeccCCCcC-ceE
Confidence 12234554 4567999999999861 11122233333333334332 234554432 356
Q ss_pred EEEEEecc
Q 009719 515 ILVATKSL 522 (527)
Q Consensus 515 iLi~~K~~ 522 (527)
+++++|++
T Consensus 225 ~v~~~~~~ 232 (232)
T 3id6_C 225 IVLSKYKG 232 (232)
T ss_dssp EEEEEEC-
T ss_pred EEEEEeCC
Confidence 77788763
|
| >3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00021 Score=66.56 Aligned_cols=68 Identities=21% Similarity=0.309 Sum_probs=48.2
Q ss_pred cChHHHHHHHHHc----CCC--cEEeecccc-CCCCC-C----CcccEEEecCcccccccChHHHHHHHhhcccCCcEEE
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTR-RLPFP-A----FSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLV 231 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae-~LPFp-D----~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lv 231 (527)
|.++.+++.|+++ ++. +.+.++++. .+|.. + ++||+|++... ......++.++.|+|||||+|+
T Consensus 96 D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~~----~~~~~~~l~~~~~~L~pgG~lv 171 (225)
T 3tr6_A 96 DVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDAD----KANTDLYYEESLKLLREGGLIA 171 (225)
T ss_dssp ESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEE
T ss_pred eCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEEEECCC----HHHHHHHHHHHHHhcCCCcEEE
Confidence 6778888888765 543 566777763 34432 2 89999996543 2333348999999999999999
Q ss_pred EecC
Q 009719 232 ISGP 235 (527)
Q Consensus 232 iS~p 235 (527)
+...
T Consensus 172 ~~~~ 175 (225)
T 3tr6_A 172 VDNV 175 (225)
T ss_dssp EECS
T ss_pred EeCC
Confidence 9764
|
| >2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0013 Score=69.31 Aligned_cols=76 Identities=20% Similarity=0.198 Sum_probs=54.1
Q ss_pred CcChHHHHHHHHHc----CC-CcEEeeccccCCC--CCCCcccEEEe----c-C-cccccccC---------------hH
Q 009719 163 RDSHKAQIQFALER----GI-PAFVAMLGTRRLP--FPAFSFDIVHC----S-R-CLIPFTAY---------------NA 214 (527)
Q Consensus 163 ~D~seaqvq~A~eR----g~-pa~~~v~dae~LP--FpD~SFDlV~c----s-~-~l~hw~d~---------------~~ 214 (527)
.|.++.+++.++++ |+ .+.+.++|+..++ |++++||+|++ + . .+.+-++. ..
T Consensus 290 ~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~ 369 (450)
T 2yxl_A 290 FDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQR 369 (450)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHH
T ss_pred EcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHH
Confidence 37778888877655 66 3567778888887 77789999995 2 2 22222211 13
Q ss_pred HHHHHHhhcccCCcEEEEecCCCC
Q 009719 215 TYLIEVDRLLRPGGYLVISGPPVQ 238 (527)
Q Consensus 215 ~aL~Ei~RVLRPGG~lviS~pp~~ 238 (527)
.+|.++.++|||||+|++++....
T Consensus 370 ~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 370 ELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp HHHHHHHTTEEEEEEEEEEESCCC
T ss_pred HHHHHHHHhcCCCcEEEEEeCCCC
Confidence 489999999999999999987443
|
| >2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00014 Score=69.54 Aligned_cols=119 Identities=13% Similarity=0.142 Sum_probs=62.6
Q ss_pred eeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhhc------------cccc---cccccCCCCCC-CC-C
Q 009719 375 RNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYDR------------GLIG---VYHDWCEPFST-YP-R 434 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~eR------------GLiG---~~hdwce~fst-YP-r 434 (527)
..|||+|||.|+|+.+|... .. +|+-+|.. .-+..+-++ |+-. +..|..+.++. ++ .
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFPED---LILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHSTTS---EEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CEEEEEcCCCCHHHHHHHHhCCCC---CEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 57999999999999888543 22 22222322 333333221 4411 12232222221 32 5
Q ss_pred ccchhhhcCccc-cccCCCCCCCCCcccccceeecccccCCcEEEEe-CCHHHHHHHHHHHhcCCc
Q 009719 435 TYDLIHVSGIES-LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR-DSPEVIDKVSRIANTVRW 498 (527)
Q Consensus 435 tyDLiHa~~~fs-~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir-d~~~~~~~i~~i~~~l~W 498 (527)
++|.|... |. .|......+.|-....+|-++-|+|+|||.+++. |..+..+.+.+.+....+
T Consensus 128 ~~d~v~~~--~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 128 QLSKMFFC--FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp CEEEEEEE--SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHSTT
T ss_pred ccCEEEEE--CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCcC
Confidence 77776532 22 1100000111222257899999999999999885 666666666655544433
|
| >3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00046 Score=67.81 Aligned_cols=42 Identities=21% Similarity=0.135 Sum_probs=34.8
Q ss_pred CCCcccEEEecCcccccccChHHHHHHHhhccc---C--CcEEEEecC
Q 009719 193 PAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLR---P--GGYLVISGP 235 (527)
Q Consensus 193 pD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLR---P--GG~lviS~p 235 (527)
++++||+|+++.+++|..+... ++.++.|+|| | ||.+++...
T Consensus 160 ~~~~fD~Ii~~dvl~~~~~~~~-ll~~l~~~Lk~~~p~~gG~l~v~~~ 206 (281)
T 3bzb_A 160 GLQRFQVVLLADLLSFHQAHDA-LLRSVKMLLALPANDPTAVALVTFT 206 (281)
T ss_dssp SCSSBSEEEEESCCSCGGGHHH-HHHHHHHHBCCTTTCTTCEEEEEEC
T ss_pred cCCCCCEEEEeCcccChHHHHH-HHHHHHHHhcccCCCCCCEEEEEEE
Confidence 4689999999999877655555 9999999999 9 998777544
|
| >3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00062 Score=65.08 Aligned_cols=98 Identities=15% Similarity=0.140 Sum_probs=58.3
Q ss_pred eeEeecCCCccchhhhccCC--C-eeEEEecCCCC----CCchhHhhhc----cc---cccc-cc-cC-CCCCCCCCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSD--P-VWVMNVVPARK----SSTLSVIYDR----GL---IGVY-HD-WC-EPFSTYPRTYD 437 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~-VwvMnvvp~~~----~ntl~vi~eR----GL---iG~~-hd-wc-e~fstYPrtyD 437 (527)
.+|||+|||.|.++..|.+. + .-|.-+=+... +..+..+-++ |+ +-+. .| .. +..+.-+.+||
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD 124 (275)
T 3bkx_A 45 EKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHFD 124 (275)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCCS
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCEE
Confidence 58999999999999888654 2 44444444332 2355544333 33 2111 12 21 11111237999
Q ss_pred hhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 438 LIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 438 LiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+|++..++.... + ...++-.+.++++|||++++.+
T Consensus 125 ~v~~~~~l~~~~------~---~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 125 RVVLAHSLWYFA------S---ANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp EEEEESCGGGSS------C---HHHHHHHHHHHTTTCSEEEEEE
T ss_pred EEEEccchhhCC------C---HHHHHHHHHHHhCCCCEEEEEE
Confidence 999999887654 1 1344444566666799999964
|
| >3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00014 Score=73.80 Aligned_cols=129 Identities=10% Similarity=0.030 Sum_probs=72.4
Q ss_pred eeeEeecCCCccchhhhccC--CCeeEEEecCCCCC-CchhHhhhc----cccccccccCCCCCCCC-CccchhhhcCcc
Q 009719 374 IRNIMDMNAFFGGFAAALTS--DPVWVMNVVPARKS-STLSVIYDR----GLIGVYHDWCEPFSTYP-RTYDLIHVSGIE 445 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~--~~VwvMnvvp~~~~-ntl~vi~eR----GLiG~~hdwce~fstYP-rtyDLiHa~~~f 445 (527)
=..|||+|||.|+++|.+.. ...-| +-.|-. ..+..+-++ |+ .-..-.|.-...+| .+||+|......
T Consensus 123 g~rVLDIGcG~G~~ta~~lA~~~ga~V---~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~d~~FDvV~~~a~~ 198 (298)
T 3fpf_A 123 GERAVFIGGGPLPLTGILLSHVYGMRV---NVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVIDGLEFDVLMVAALA 198 (298)
T ss_dssp TCEEEEECCCSSCHHHHHHHHTTCCEE---EEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGGGCCCSEEEECTTC
T ss_pred cCEEEEECCCccHHHHHHHHHccCCEE---EEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCCCCCcCEEEECCCc
Confidence 36899999999998866532 12222 222222 444444333 65 21111122222344 899999764331
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHHH---HHH-H-HHHHhcCCceeEEecCCCCCCCCceEEEEEe
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEV---IDK-V-SRIANTVRWTAAVHDKEPGSNGREKILVATK 520 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~---~~~-i-~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K 520 (527)
. +...++-|+-|+|||||.+++++.... +.. + ....+ .|+....-+..+ ...+.|.+++|
T Consensus 199 ~------------d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~--gf~~~~~~~p~~-~v~N~vv~a~k 263 (298)
T 3fpf_A 199 E------------PKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDIT--GFRRAGVVLPSG-KVNNTSVLVFK 263 (298)
T ss_dssp S------------CHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGT--TEEEEEEECCCT-TCCCEEEEEEE
T ss_pred c------------CHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhh--hhhheeEECCCC-CcCcEEEEEEc
Confidence 1 235799999999999999999973221 000 0 11222 566655444333 23467888888
Q ss_pred c
Q 009719 521 S 521 (527)
Q Consensus 521 ~ 521 (527)
.
T Consensus 264 ~ 264 (298)
T 3fpf_A 264 C 264 (298)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00013 Score=70.37 Aligned_cols=88 Identities=13% Similarity=0.132 Sum_probs=63.3
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLI 218 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~ 218 (527)
+|.++-.+......+ .+...|+++.|+++|+++ |+...+.+.|.... .+.++||+|.....+||..+..+ ++.
T Consensus 60 ~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~LHlL~~~~~-al~ 136 (200)
T 3fzg_A 60 FNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKMLPVLKQQDV-NIL 136 (200)
T ss_dssp THHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-HTTSEEEEEEEETCHHHHHHTTC-CHH
T ss_pred CCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-CCCCCcChhhHhhHHHhhhhhHH-HHH
Confidence 566666666553233 555569999999999865 55534444554333 56799999999999988844344 788
Q ss_pred HHhhcccCCcEEEEe
Q 009719 219 EVDRLLRPGGYLVIS 233 (527)
Q Consensus 219 Ei~RVLRPGG~lviS 233 (527)
.+.+.|||||.||--
T Consensus 137 ~v~~~L~pggvfISf 151 (200)
T 3fzg_A 137 DFLQLFHTQNFVISF 151 (200)
T ss_dssp HHHHTCEEEEEEEEE
T ss_pred HHHHHhCCCCEEEEe
Confidence 999999999998753
|
| >2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus} | Back alignment and structure |
|---|
Probab=96.98 E-value=8.8e-05 Score=73.32 Aligned_cols=84 Identities=10% Similarity=-0.011 Sum_probs=54.7
Q ss_pred hhccccccccC-CeeEEeeccCcChHHHHHHHHHcCC-------CcEEe--eccccCCCCCCCcccEEEecCccccccc-
Q 009719 143 VASFGGSMLSE-NILTLSFAPRDSHKAQIQFALERGI-------PAFVA--MLGTRRLPFPAFSFDIVHCSRCLIPFTA- 211 (527)
Q Consensus 143 vgsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eRg~-------pa~~~--v~dae~LPFpD~SFDlV~cs~~l~hw~d- 211 (527)
.|.|+.+|..+ .|+++++++ ... .|.++.. .+.+. ++|+..|| +++||+|+|..+ .+..+
T Consensus 85 tG~~s~~la~~~~V~gvD~s~-m~~-----~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~~-~~~~~~ 155 (265)
T 2oxt_A 85 RGGWSYYAASRPHVMDVRAYT-LGV-----GGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDVG-ESSPKW 155 (265)
T ss_dssp TSHHHHHHHTSTTEEEEEEEC-CCC-----SSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECCC-CCCSCH
T ss_pred CCHHHHHHHHcCcEEEEECch-hhh-----hhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeCc-ccCCcc
Confidence 56666666654 577787776 211 1211211 34566 78888776 789999999865 22211
Q ss_pred ---ChH--HHHHHHhhcccCCc--EEEEecC
Q 009719 212 ---YNA--TYLIEVDRLLRPGG--YLVISGP 235 (527)
Q Consensus 212 ---~~~--~aL~Ei~RVLRPGG--~lviS~p 235 (527)
... .+|.++.|+||||| .|++..-
T Consensus 156 ~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 156 SVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred chhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 111 27999999999999 9999663
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00011 Score=79.77 Aligned_cols=89 Identities=11% Similarity=0.036 Sum_probs=68.0
Q ss_pred hhccccc----cccCCeeEEeeccCcChHHHHHHHHHc----C-CCcEEeeccccCC--CCCCCcccEEEecCccccccc
Q 009719 143 VASFGGS----MLSENILTLSFAPRDSHKAQIQFALER----G-IPAFVAMLGTRRL--PFPAFSFDIVHCSRCLIPFTA 211 (527)
Q Consensus 143 vgsfga~----Ll~r~V~~msiAp~D~seaqvq~A~eR----g-~pa~~~v~dae~L--PFpD~SFDlV~cs~~l~hw~d 211 (527)
+|+.||. |..+|..+..| |.++.+|+.|+.+ | +.+.+.+++++.| ++++++||+|+|..+++|.++
T Consensus 73 vGCG~G~~~~~la~~ga~V~gi---D~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ehv~~ 149 (569)
T 4azs_A 73 LGCAQGFFSLSLASKGATIVGI---DFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVFHHIVH 149 (569)
T ss_dssp ETCTTSHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCHHHHHH
T ss_pred ECCCCcHHHHHHHhCCCEEEEE---CCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcchhcCCC
Confidence 6666654 45667765555 8889999988753 4 4567888899988 788999999999999999987
Q ss_pred ChH-HHHHHHhhcccCCcEEEEec
Q 009719 212 YNA-TYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 212 ~~~-~aL~Ei~RVLRPGG~lviS~ 234 (527)
... ..+..+.+.|+++|..++.+
T Consensus 150 ~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 150 LHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp HHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred HHHHHHHHHHHHHhccccceeeEE
Confidence 653 35667888899988777644
|
| >3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00038 Score=64.76 Aligned_cols=68 Identities=16% Similarity=0.136 Sum_probs=47.7
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccC-CC-CC---CCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEE
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRR-LP-FP---AFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~-LP-Fp---D~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lvi 232 (527)
|.++.+++.|+++ |+. +.+.++|+.. +| ++ .++||+|++..... ....+|.++.|+|||||++++
T Consensus 90 D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~~d~~~~----~~~~~l~~~~~~L~pgG~lv~ 165 (223)
T 3duw_A 90 EASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIFIDADKQ----NNPAYFEWALKLSRPGTVIIG 165 (223)
T ss_dssp ESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEEECSCGG----GHHHHHHHHHHTCCTTCEEEE
T ss_pred ECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEEEcCCcH----HHHHHHHHHHHhcCCCcEEEE
Confidence 6778888888754 553 5667777643 22 22 26799999875422 223499999999999999998
Q ss_pred ecC
Q 009719 233 SGP 235 (527)
Q Consensus 233 S~p 235 (527)
...
T Consensus 166 ~~~ 168 (223)
T 3duw_A 166 DNV 168 (223)
T ss_dssp ESC
T ss_pred eCC
Confidence 765
|
| >2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00032 Score=65.96 Aligned_cols=122 Identities=9% Similarity=0.122 Sum_probs=69.1
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhh----ccc--ccc-ccccCCCCCC-C-CCccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD----RGL--IGV-YHDWCEPFST-Y-PRTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e----RGL--iG~-~hdwce~fst-Y-PrtyDLiHa~~ 443 (527)
..|||+|||.|.|+.+|... |-+ +|+-+|-. .-+..+-+ .|+ +-+ ..|..+ ++. + +.+||.|++.
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~p~~--~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~-l~~~~~~~~~d~v~~~- 115 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQNPDI--NYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT-LTDVFEPGEVKRVYLN- 115 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHCTTS--EEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG-HHHHCCTTSCCEEEEE-
T ss_pred ceEEEEecCCCHHHHHHHHHCCCC--CEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCcCCcCEEEEE-
Confidence 46999999999999988543 211 33334433 44444333 354 211 223222 221 3 3789988763
Q ss_pred ccc-cccCCCCCCCCCcccccceeecccccCCcEEEEe-CCHHHHHHHHHHHhcCCceeE
Q 009719 444 IES-LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR-DSPEVIDKVSRIANTVRWTAA 501 (527)
Q Consensus 444 ~fs-~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir-d~~~~~~~i~~i~~~l~W~~~ 501 (527)
|+ .|.....++.+-....+|-|+-|+|+|||.+++. |..+..+.+.+.+....|+..
T Consensus 116 -~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~ 174 (213)
T 2fca_A 116 -FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLT 174 (213)
T ss_dssp -SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred -CCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCccc
Confidence 22 1210000112222467899999999999999987 566666666666555556543
|
| >1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00014 Score=68.00 Aligned_cols=89 Identities=11% Similarity=0.156 Sum_probs=55.9
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc-----cccccccccCCCCCCCCCccchhhhcCccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR-----GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLI 448 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR-----GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~ 448 (527)
.+|||+|||.|.++..|.+... +|+-++.. ..+..+-++ .+--+..|..+.++ -+.+||+|.+...+...
T Consensus 72 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~~~ 147 (231)
T 1vbf_A 72 QKVLEIGTGIGYYTALIAEIVD---KVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-EEKPYDRVVVWATAPTL 147 (231)
T ss_dssp CEEEEECCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-GGCCEEEEEESSBBSSC
T ss_pred CEEEEEcCCCCHHHHHHHHHcC---EEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccc-cCCCccEEEECCcHHHH
Confidence 4899999999999999876542 23333322 444444443 12112223333222 13689999998766533
Q ss_pred cCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 449 KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 449 ~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
.-|+-|+|+|||.+++...
T Consensus 148 ---------------~~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 148 ---------------LCKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp ---------------CHHHHHTEEEEEEEEEEEC
T ss_pred ---------------HHHHHHHcCCCcEEEEEEc
Confidence 2378899999999999853
|
| >3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00014 Score=69.34 Aligned_cols=122 Identities=12% Similarity=0.148 Sum_probs=65.9
Q ss_pred eeeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhH----hhhccccc--c-ccccCCCCCC-C-CCccchhhh
Q 009719 374 IRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSV----IYDRGLIG--V-YHDWCEPFST-Y-PRTYDLIHV 441 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~v----i~eRGLiG--~-~hdwce~fst-Y-PrtyDLiHa 441 (527)
-..|||+|||.|.++.+|... ..-|.-| |.. ..+.. +-+.|+-. + ..|-.+.++. + +.+||+|++
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~gi---D~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~ 111 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGI---EVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQL 111 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEE---CSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEE
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEE---EecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEE
Confidence 357999999999999888532 3333333 322 33333 23345421 1 1221221111 2 479999987
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEe-CCHHHHHHHHHHHhcC-Cce
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR-DSPEVIDKVSRIANTV-RWT 499 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir-d~~~~~~~i~~i~~~l-~W~ 499 (527)
... ..|......+.|-.-..++-|+-|+|+|||.+++. |.....+.+.+++... .|+
T Consensus 112 ~~~-~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~~~~~ 170 (218)
T 3dxy_A 112 FFP-DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYK 170 (218)
T ss_dssp ESC-CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEE
T ss_pred eCC-CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhCCCcc
Confidence 421 22210000001111125888999999999999887 4555666666665432 344
|
| >2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=96.92 E-value=3.2e-05 Score=69.39 Aligned_cols=96 Identities=17% Similarity=0.172 Sum_probs=56.9
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----cccc----ccccccCCCCCCCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGLI----GVYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGLi----G~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
.+|||+|||.|.++.+|...+.. +|+-+|-. ..+..+-+ .|+- =+..|+.+.++..+..||+|-++..|
T Consensus 33 ~~vLDlGcG~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~ 110 (177)
T 2esr_A 33 GRVLDLFAGSGGLAIEAVSRGMS--AAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPY 110 (177)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCC--EEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSS
T ss_pred CeEEEeCCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCC
Confidence 47999999999999888766532 23333332 33333322 2331 11223333223345679999987665
Q ss_pred ccccCCCCCCCCCcccccceeec--ccccCCcEEEEeCC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMD--RMLRPEGTVVVRDS 482 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmD--RILRP~G~~iird~ 482 (527)
..- ....++-++- |+|+|||.+++...
T Consensus 111 ~~~----------~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 111 AKE----------TIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp HHH----------HHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred Ccc----------hHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 311 1234455554 99999999999853
|
| >3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0022 Score=65.84 Aligned_cols=90 Identities=11% Similarity=0.017 Sum_probs=58.8
Q ss_pred cCcChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCccccc-------ccChHHHHHHHhhcccCCc
Q 009719 162 PRDSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPF-------TAYNATYLIEVDRLLRPGG 228 (527)
Q Consensus 162 p~D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw-------~d~~~~aL~Ei~RVLRPGG 228 (527)
..|.++.+++.|+++ |+ .+.+.++|+..+|+++++||+|+|.--.... .+.-..++.++.|+| +|+
T Consensus 246 g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~ 324 (373)
T 3tm4_A 246 GIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKR 324 (373)
T ss_dssp EEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEE
T ss_pred EEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCe
Confidence 337788888888764 55 4678889999999999999999996332111 111134889999999 444
Q ss_pred EEEEecCCCCCCCchhHHHHHHHHHHhcceEEee
Q 009719 229 YLVISGPPVQWPKQDKEWADLQAVARALCYELIA 262 (527)
Q Consensus 229 ~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~ 262 (527)
.++++.. .+.+++..+.+.|+...
T Consensus 325 ~~~i~~~----------~~~~~~~~~~~G~~~~~ 348 (373)
T 3tm4_A 325 GVFITTE----------KKAIEEAIAENGFEIIH 348 (373)
T ss_dssp EEEEESC----------HHHHHHHHHHTTEEEEE
T ss_pred EEEEECC----------HHHHHHHHHHcCCEEEE
Confidence 4444432 23455566666777653
|
| >2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.00051 Score=69.22 Aligned_cols=100 Identities=13% Similarity=0.099 Sum_probs=53.0
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCCCCchhHh--hhccc--cccccccCCCCCCCCCccchhhhcCccc--c
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKSSTLSVI--YDRGL--IGVYHDWCEPFSTYPRTYDLIHVSGIES--L 447 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~ntl~vi--~eRGL--iG~~hdwce~fstYPrtyDLiHa~~~fs--~ 447 (527)
..|||+|||.|+|+..|.+. .|.-+-+-...++..+..+ -..|. +-+... ...+..-+.+||+|.|+..++ .
T Consensus 84 ~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~D~~~l~~~~fD~V~sd~~~~~g~ 162 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSG-VDVFFIPPERCDTLLCDIGESSPN 162 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECS-CCTTTSCCCCCSEEEECCCCCCSS
T ss_pred CEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHHhhhcCCCCeEEEec-cccccCCcCCCCEEEECCccccCc
Confidence 58999999999999888776 3443333111111111000 00111 111111 012211147899999986654 1
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
+. .+.-....+|-++-|+|+|||.+++.
T Consensus 163 ~~-----~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 163 PT-----VEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp HH-----HHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred ch-----hhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 10 00000013678899999999999996
|
| >3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=4.2e-05 Score=72.20 Aligned_cols=93 Identities=14% Similarity=0.159 Sum_probs=58.3
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc---cccc-cccCCCCCCCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL---IGVY-HDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL---iG~~-hdwce~fstYPrtyDLiHa~~~f 445 (527)
.+|||+|||.|+++.+|.+... .|+-+|-. ..+..+-+ .|+ +-+. .|..+ ++ -+.+||+|.++..|
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~-~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTGM---RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLL-LA-SFLKADVVFLSPPW 154 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH-HG-GGCCCSEEEECCCC
T ss_pred CEEEECccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHH-hc-ccCCCCEEEECCCc
Confidence 4799999999999999977653 33333322 33333322 233 1111 22222 11 23789999998777
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.... .....+.|+-|+|+|||.+|+..
T Consensus 155 ~~~~---------~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 155 GGPD---------YATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp SSGG---------GGGSSSBCTTTSCSSCHHHHHHH
T ss_pred CCcc---------hhhhHHHHHHhhcCCcceeHHHH
Confidence 6543 12337789999999999988764
|
| >3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.00057 Score=73.10 Aligned_cols=69 Identities=13% Similarity=0.120 Sum_probs=52.0
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++ |++.|+++ |+. +.+..+|.+.++++ ++||+|+|...+.|+.... ...+.++.|+|||||+++++.
T Consensus 188 D~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 188 EAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp ECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred EcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 5666 77777653 553 56778888888887 5899999987777775432 347889999999999999643
|
| >2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.00084 Score=63.41 Aligned_cols=106 Identities=12% Similarity=0.118 Sum_probs=64.2
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCC-CchhHhhhc-----cc--c-ccccccCCCCCCCC-Cccchhhh
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKS-STLSVIYDR-----GL--I-GVYHDWCEPFSTYP-RTYDLIHV 441 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~-ntl~vi~eR-----GL--i-G~~hdwce~fstYP-rtyDLiHa 441 (527)
.+|||+|||.|.++.+|... ..-|.. .|.. ..+..+-++ |. + =...|..+. .+| .+||+|-+
T Consensus 98 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~---~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~--~~~~~~~D~v~~ 172 (258)
T 2pwy_A 98 MRVLEAGTGSGGLTLFLARAVGEKGLVES---YEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA--ELEEAAYDGVAL 172 (258)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEE---EESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC--CCCTTCEEEEEE
T ss_pred CEEEEECCCcCHHHHHHHHHhCCCCEEEE---EeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc--CCCCCCcCEEEE
Confidence 48999999999999888654 222222 2222 444444433 42 1 112243332 134 68999876
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH-HHHHHHHHHHhcCCce
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP-EVIDKVSRIANTVRWT 499 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~-~~~~~i~~i~~~l~W~ 499 (527)
+ .. ....+|-++-|+|+|||.+++-... +.+.++.+.++...|.
T Consensus 173 ~-----~~---------~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 173 D-----LM---------EPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFR 217 (258)
T ss_dssp E-----SS---------CGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEE
T ss_pred C-----Cc---------CHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 3 11 1246899999999999999988653 3555555555555444
|
| >1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.00078 Score=67.69 Aligned_cols=88 Identities=16% Similarity=0.147 Sum_probs=58.3
Q ss_pred hccccccccC-CeeEEeeccCcChHHHHHHHHHcC----------CCcEEeeccccC-CCCCCCcccEEEecCccccc--
Q 009719 144 ASFGGSMLSE-NILTLSFAPRDSHKAQIQFALERG----------IPAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPF-- 209 (527)
Q Consensus 144 gsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eRg----------~pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw-- 209 (527)
|.++.+++.+ +.. .+...|.++.+++.|+++- ..+.+..+|+.. ++..+++||+|++.... |+
T Consensus 89 G~~~~~l~~~~~~~--~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~-~~~~ 165 (314)
T 1uir_A 89 GATLREVLKHPTVE--KAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVIIDLTD-PVGE 165 (314)
T ss_dssp SHHHHHHTTSTTCC--EEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEEECCC-CBST
T ss_pred CHHHHHHHhcCCCC--EEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEECCCC-cccc
Confidence 4444455554 121 2333366788888887642 124567778655 66678999999998553 55
Q ss_pred -ccC----hHHHHHHHhhcccCCcEEEEec
Q 009719 210 -TAY----NATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 210 -~d~----~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
... ...++.++.|+|||||.|++..
T Consensus 166 ~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 166 DNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp TCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 211 1348999999999999999864
|
| >2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.00044 Score=65.60 Aligned_cols=67 Identities=22% Similarity=0.354 Sum_probs=48.0
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccC-CC--------------CCC--CcccEEEecCcccccccChHHHHHHH
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRR-LP--------------FPA--FSFDIVHCSRCLIPFTAYNATYLIEV 220 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~-LP--------------FpD--~SFDlV~cs~~l~hw~d~~~~aL~Ei 220 (527)
|.++.+++.|+++ |.. +.+..+|+.. +| |++ ++||+|++.....++ ..+|.++
T Consensus 92 D~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~----~~~l~~~ 167 (239)
T 2hnk_A 92 DVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENY----PNYYPLI 167 (239)
T ss_dssp ESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGH----HHHHHHH
T ss_pred ECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHHH----HHHHHHH
Confidence 6677888888765 443 4556666433 23 555 899999988654332 2489999
Q ss_pred hhcccCCcEEEEec
Q 009719 221 DRLLRPGGYLVISG 234 (527)
Q Consensus 221 ~RVLRPGG~lviS~ 234 (527)
.++|||||++++..
T Consensus 168 ~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 168 LKLLKPGGLLIADN 181 (239)
T ss_dssp HHHEEEEEEEEEEC
T ss_pred HHHcCCCeEEEEEc
Confidence 99999999999975
|
| >3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=9.7e-05 Score=78.26 Aligned_cols=124 Identities=10% Similarity=0.188 Sum_probs=74.6
Q ss_pred HHHHHHHhhhccCCCCeeeEeecCCC------ccchhhhccCC-----CeeEEEecCCCCCCchhHhhhccccccccccC
Q 009719 358 VAYYKNTLNVKLGTPAIRNIMDMNAF------FGGFAAALTSD-----PVWVMNVVPARKSSTLSVIYDRGLIGVYHDWC 426 (527)
Q Consensus 358 v~~Y~~~l~~~i~~~~iRnvmDm~ag------~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwc 426 (527)
...|.+.|.+.... -.+|||+||| +||.+..|..+ .|.-+-+-|.- . .....+-=+..|-
T Consensus 203 ~~~Ye~lL~~l~~~--~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m----~--~~~~rI~fv~GDa- 273 (419)
T 3sso_A 203 TPHYDRHFRDYRNQ--QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKS----H--VDELRIRTIQGDQ- 273 (419)
T ss_dssp HHHHHHHHGGGTTS--CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCG----G--GCBTTEEEEECCT-
T ss_pred HHHHHHHHHhhcCC--CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHH----h--hcCCCcEEEEecc-
Confidence 45677766644332 3789999999 78876666432 24444443331 0 1111111111121
Q ss_pred CCCCCC------CCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC------------------
Q 009719 427 EPFSTY------PRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS------------------ 482 (527)
Q Consensus 427 e~fstY------PrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~------------------ 482 (527)
+.+++- ..+||+|.++.. ++. ......|-|+=|+|||||++|+.|-
T Consensus 274 ~dlpf~~~l~~~d~sFDlVisdgs--H~~--------~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~ 343 (419)
T 3sso_A 274 NDAEFLDRIARRYGPFDIVIDDGS--HIN--------AHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECS 343 (419)
T ss_dssp TCHHHHHHHHHHHCCEEEEEECSC--CCH--------HHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCT
T ss_pred cccchhhhhhcccCCccEEEECCc--ccc--------hhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcch
Confidence 111111 378999998643 221 1245688999999999999999752
Q ss_pred HHHHHHHHHHHhcCCcee
Q 009719 483 PEVIDKVSRIANTVRWTA 500 (527)
Q Consensus 483 ~~~~~~i~~i~~~l~W~~ 500 (527)
..+++.++++...+.|.-
T Consensus 344 ~tii~~lk~l~D~l~~~~ 361 (419)
T 3sso_A 344 GTSLGLLKSLIDAIQHQE 361 (419)
T ss_dssp TSHHHHHHHHHHHHTGGG
T ss_pred hHHHHHHHHHHHHhcccc
Confidence 346888999999988864
|
| >3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.00054 Score=69.98 Aligned_cols=95 Identities=17% Similarity=0.209 Sum_probs=61.1
Q ss_pred CCCeeeEeecCCCccchhhhccCC--C--eeEEEecCCCCCCchhHhhhc-cccccccccCCCCCCCCCccchhhhcCcc
Q 009719 371 TPAIRNIMDMNAFFGGFAAALTSD--P--VWVMNVVPARKSSTLSVIYDR-GLIGVYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 371 ~~~iRnvmDm~ag~GgFaAaL~~~--~--VwvMnvvp~~~~ntl~vi~eR-GLiG~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
....+.|+|+|||.|.++.+|.+. . +.+.-+ |. .+..+-++ ++-=+-+|.-++ +|.. |+|.+..++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~----~~~~a~~~~~v~~~~~d~~~~---~p~~-D~v~~~~vl 271 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PH----VIQDAPAFSGVEHLGGDMFDG---VPKG-DAIFIKWIC 271 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HH----HHTTCCCCTTEEEEECCTTTC---CCCC-SEEEEESCG
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HH----HHHhhhhcCCCEEEecCCCCC---CCCC-CEEEEechh
Confidence 456789999999999999998542 2 333333 21 11111111 222223444343 4555 999999999
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
-.|. + =....+|-++=|.|+|||.++|.|
T Consensus 272 h~~~------~-~~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 272 HDWS------D-EHCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp GGBC------H-HHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hcCC------H-HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 8775 1 123468999999999999999965
|
| >3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.00021 Score=65.78 Aligned_cols=90 Identities=16% Similarity=0.115 Sum_probs=55.5
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc--ccc-ccccCCCCCCCCCccchhhhcCcc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL--IGV-YHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL--iG~-~hdwce~fstYPrtyDLiHa~~~f 445 (527)
-.+|||+|||.|.+++.|.+...-| .-.|-. ..+..+-++ |+ +-+ ..|..+.+. -..+||+|.++..+
T Consensus 78 ~~~vLdiG~G~G~~~~~la~~~~~v---~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~i~~~~~~ 153 (210)
T 3lbf_A 78 QSRVLEIGTGSGYQTAILAHLVQHV---CSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ-ARAPFDAIIVTAAP 153 (210)
T ss_dssp TCEEEEECCTTSHHHHHHHHHSSEE---EEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCEEEEEESSBC
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCEE---EEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc-cCCCccEEEEccch
Confidence 3589999999999999987663322 222322 344444333 33 111 223333221 13689999998766
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
.... =++-|+|+|||.+++.-.
T Consensus 154 ~~~~---------------~~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 154 PEIP---------------TALMTQLDEGGILVLPVG 175 (210)
T ss_dssp SSCC---------------THHHHTEEEEEEEEEEEC
T ss_pred hhhh---------------HHHHHhcccCcEEEEEEc
Confidence 5442 157899999999999743
|
| >3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.00068 Score=66.12 Aligned_cols=76 Identities=13% Similarity=0.139 Sum_probs=45.7
Q ss_pred eeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCC---CCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEE
Q 009719 155 ILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLP---FPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLV 231 (527)
Q Consensus 155 V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LP---FpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lv 231 (527)
|.++++++... +.+++.|.++ ..+.+..+|+..++ ...++||+|++.... ++....++..+.|+|||||+|+
T Consensus 104 V~avD~s~~~l-~~l~~~a~~r-~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lv 178 (232)
T 3id6_C 104 AYGVEFSPRVV-RELLLVAQRR-PNIFPLLADARFPQSYKSVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDML 178 (232)
T ss_dssp EEEEECCHHHH-HHHHHHHHHC-TTEEEEECCTTCGGGTTTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEECcHHHH-HHHHHHhhhc-CCeEEEEcccccchhhhccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEE
Confidence 55555433211 1234556555 34556677876542 225799999988543 3333334456667999999999
Q ss_pred EecC
Q 009719 232 ISGP 235 (527)
Q Consensus 232 iS~p 235 (527)
++..
T Consensus 179 isik 182 (232)
T 3id6_C 179 LVIK 182 (232)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9854
|
| >3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.00043 Score=66.72 Aligned_cols=123 Identities=15% Similarity=0.156 Sum_probs=66.1
Q ss_pred eeeEeecCCCccchhhhccCC-C-eeEEEecCCCCC-CchhHhhh----------ccc--ccc-ccccCCCCCC-C-CCc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-P-VWVMNVVPARKS-STLSVIYD----------RGL--IGV-YHDWCEPFST-Y-PRT 435 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~-VwvMnvvp~~~~-ntl~vi~e----------RGL--iG~-~hdwce~fst-Y-Prt 435 (527)
-..|||+|||.|.|+.+|... | .-|.-| |-. ..+..+-+ .|+ |-+ ..|.-+.++. + +.+
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~~~v~Gi---Dis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPDTLILGL---EIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTTSEEEEE---ESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred CCeEEEEccCCcHHHHHHHHHCCCCeEEEE---ECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 357999999999999998654 2 222222 222 22222211 232 111 2222222221 2 478
Q ss_pred cchhhhcCccc-cccCCCCCCCCCcccccceeecccccCCcEEEEe-CCHHHHHHHHHHHhcCC-ceeE
Q 009719 436 YDLIHVSGIES-LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR-DSPEVIDKVSRIANTVR-WTAA 501 (527)
Q Consensus 436 yDLiHa~~~fs-~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir-d~~~~~~~i~~i~~~l~-W~~~ 501 (527)
||+|... |. .|......+.|.....+|-|+-|+|+|||.+++. |..+..+.+.+.+...- |+..
T Consensus 124 ~D~v~~~--~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 124 LTKMFFL--FPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp EEEEEEE--SCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEEEE
T ss_pred eeEEEEe--CCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCCCcccc
Confidence 9998653 22 2210001233444467999999999999999886 66666676666655443 5543
|
| >2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.00028 Score=66.88 Aligned_cols=125 Identities=14% Similarity=0.227 Sum_probs=71.9
Q ss_pred eeEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhhhc----cccc---cc-c----------------cc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIYDR----GLIG---VY-H----------------DW 425 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~eR----GLiG---~~-h----------------dw 425 (527)
.+|||+|||.|.++..|... .|..+-+-| ..+..+-++ |+-. +. . .|
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~----~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 137 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALPEDGKILCCDVSE----EWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSW 137 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCH----HHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGG
T ss_pred CEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCH----HHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccc
Confidence 48999999999999888543 233332221 222222222 3311 10 0 12
Q ss_pred CCCCCCCC-CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC------------HHHHHH----
Q 009719 426 CEPFSTYP-RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS------------PEVIDK---- 488 (527)
Q Consensus 426 ce~fstYP-rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~------------~~~~~~---- 488 (527)
-..|++ + .+||+|.++.... ....++-++-|+|||||.+++.+- ......
T Consensus 138 ~~~f~~-~~~~fD~I~~~~~~~------------~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~ 204 (239)
T 2hnk_A 138 ASDFAF-GPSSIDLFFLDADKE------------NYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKF 204 (239)
T ss_dssp GTTTCC-STTCEEEEEECSCGG------------GHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHH
T ss_pred cccccC-CCCCcCEEEEeCCHH------------HHHHHHHHHHHHcCCCeEEEEEccccCCcccCccccchHHHHHHHH
Confidence 222321 2 6799998763322 224677888999999999999861 112222
Q ss_pred HHHHHhcCCceeEEecCCCCCCCCceEEEEEecc
Q 009719 489 VSRIANTVRWTAAVHDKEPGSNGREKILVATKSL 522 (527)
Q Consensus 489 i~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K~~ 522 (527)
.+.+...-++++..... .+.+.+++|++
T Consensus 205 ~~~~~~~~~~~~~~~p~------~~g~~~~~~~~ 232 (239)
T 2hnk_A 205 NELVYNDSLVDVSLVPI------ADGVSLVRKRL 232 (239)
T ss_dssp HHHHHHCTTEEEEEECS------TTCEEEEEECC
T ss_pred HHHHhhCCCeEEEEEEc------CCceEeeeehh
Confidence 33345556677776533 24588899875
|
| >3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.00018 Score=68.54 Aligned_cols=125 Identities=14% Similarity=0.197 Sum_probs=70.4
Q ss_pred eeEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhhh----ccccc---cc-cccCCCCCCCC-----Ccc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIYD----RGLIG---VY-HDWCEPFSTYP-----RTY 436 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~e----RGLiG---~~-hdwce~fstYP-----rty 436 (527)
++|||+|||.|.++.+|... .|..+-+-| ..+.++-+ .|+-. +. .|..+.++..| .+|
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~----~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~f 149 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDGQIIACDQDP----NATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEF 149 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCH----HHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCH----HHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 58999999999998888653 233332211 33333322 24311 11 12111112221 679
Q ss_pred chhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC------------HHHHHHHHHH----HhcCCcee
Q 009719 437 DLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS------------PEVIDKVSRI----ANTVRWTA 500 (527)
Q Consensus 437 DLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~------------~~~~~~i~~i----~~~l~W~~ 500 (527)
|+|.++.... ....++-++-|+|||||.+++.+. ......++++ ...-+++.
T Consensus 150 D~V~~d~~~~------------~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 217 (232)
T 3cbg_A 150 DLIFIDADKR------------NYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRI 217 (232)
T ss_dssp EEEEECSCGG------------GHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEE
T ss_pred CEEEECCCHH------------HHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEE
Confidence 9998753322 234577888899999999999742 1122333333 44456776
Q ss_pred EEecCCCCCCCCceEEEEEec
Q 009719 501 AVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 501 ~~~~~e~~~~~~ekiLi~~K~ 521 (527)
..... .+.+.+++|+
T Consensus 218 ~~lp~------~dG~~~~~~~ 232 (232)
T 3cbg_A 218 SVIPL------GDGMTLALKK 232 (232)
T ss_dssp EEECS------BTCEEEEEEC
T ss_pred EEEEc------CCeEEEEEeC
Confidence 66532 3568888884
|
| >2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0016 Score=69.62 Aligned_cols=77 Identities=18% Similarity=0.208 Sum_probs=54.2
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCCC-CCCcccEEEe----cC--ccc-------ccccC--------hHHH
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLPF-PAFSFDIVHC----SR--CLI-------PFTAY--------NATY 216 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LPF-pD~SFDlV~c----s~--~l~-------hw~d~--------~~~a 216 (527)
|.++.+++.++++ |+. +.+.++|+..++. .+++||.|+| +. .+. +|... ...+
T Consensus 149 Dis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~i 228 (479)
T 2frx_A 149 EFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQREL 228 (479)
T ss_dssp CSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHH
Confidence 7788888877654 664 5677788888875 6789999996 21 111 22211 2248
Q ss_pred HHHHhhcccCCcEEEEecCCCCCC
Q 009719 217 LIEVDRLLRPGGYLVISGPPVQWP 240 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~pp~~~~ 240 (527)
|.++.|+|||||+|++|+-.....
T Consensus 229 L~~a~~~LkpGG~LvysTcs~~~~ 252 (479)
T 2frx_A 229 IDSAFHALRPGGTLVYSTCTLNQE 252 (479)
T ss_dssp HHHHHHHEEEEEEEEEEESCCSST
T ss_pred HHHHHHhcCCCCEEEEecccCCcc
Confidence 999999999999999998755443
|
| >2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.00077 Score=65.49 Aligned_cols=125 Identities=11% Similarity=0.110 Sum_probs=68.4
Q ss_pred CeeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhh-------ccc---cccc-cccCCCCC-----CC-C
Q 009719 373 AIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD-------RGL---IGVY-HDWCEPFS-----TY-P 433 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e-------RGL---iG~~-hdwce~fs-----tY-P 433 (527)
.-.+|||+|||.|.++..|..+ |- .+|+-++-. ..+..+-+ .|+ +-++ .|..+..+ .+ +
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEK--AEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTT--EEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCC--CeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 3458999999999998877543 11 122222221 22222211 233 2222 23222211 12 4
Q ss_pred CccchhhhcCcccccc---CC------CCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCcee
Q 009719 434 RTYDLIHVSGIESLIK---NP------GSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTA 500 (527)
Q Consensus 434 rtyDLiHa~~~fs~~~---~~------~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~ 500 (527)
.+||+|-++--|.... .+ ......+.+..++-++-|+|+|||.+++--..+.+.++.+.++.- |..
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~-~~~ 188 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGSR-FGG 188 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTTT-EEE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHhc-CCc
Confidence 7899999974443210 00 001134567888999999999999998876666666777776663 653
|
| >1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0019 Score=63.71 Aligned_cols=89 Identities=10% Similarity=0.116 Sum_probs=58.8
Q ss_pred hccccccccC-CeeEEeeccCcChHHHHHHHHHcC------C---CcEEeeccccC-CCCCCCcccEEEecCcccccccC
Q 009719 144 ASFGGSMLSE-NILTLSFAPRDSHKAQIQFALERG------I---PAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAY 212 (527)
Q Consensus 144 gsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eRg------~---pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~ 212 (527)
|..+.+++.+ ++. .+...|.++.+++.|++.- . .+.+..+|+.. |+..+++||+|++.... |+...
T Consensus 87 G~~~~~l~~~~~~~--~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d~~~-~~~~~ 163 (275)
T 1iy9_A 87 GGVIREILKHPSVK--KATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVDSTE-PVGPA 163 (275)
T ss_dssp CHHHHHHTTCTTCS--EEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEESCSS-CCSCC
T ss_pred HHHHHHHHhCCCCc--eEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEECCCC-CCCcc
Confidence 4444455555 332 2333366788999988642 2 24566777654 56667899999997543 43221
Q ss_pred ----hHHHHHHHhhcccCCcEEEEecC
Q 009719 213 ----NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 213 ----~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
...++.++.|+|||||.|++...
T Consensus 164 ~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 164 VNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp CCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred hhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 12499999999999999999864
|
| >1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=96.73 E-value=6.2e-05 Score=66.33 Aligned_cols=94 Identities=15% Similarity=0.124 Sum_probs=54.0
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc-cccc-cccCCCCCCCC---CccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL-IGVY-HDWCEPFSTYP---RTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL-iG~~-hdwce~fstYP---rtyDLiHa~~~ 444 (527)
.+|||+|||.|.++.+|....-- |+-.|.. ..+..+-+ .|+ +-++ .|..+..+..+ .+||+|.++..
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~ 119 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASEGWE---AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPP 119 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHTTCE---EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CeEEEeCCCcCHHHHHHHHCCCe---EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCC
Confidence 47999999999999888655322 3333433 33333332 232 1111 12222111111 27999999866
Q ss_pred cccccCCCCCCCCCcccccceeec--ccccCCcEEEEeCC
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMD--RMLRPEGTVVVRDS 482 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmD--RILRP~G~~iird~ 482 (527)
|. . ....++-++- |+|+|||.+++...
T Consensus 120 ~~--~---------~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 120 YA--M---------DLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp TT--S---------CTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred Cc--h---------hHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 54 1 1234555555 99999999999753
|
| >2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0011 Score=60.36 Aligned_cols=55 Identities=9% Similarity=0.106 Sum_probs=41.8
Q ss_pred cEEeeccccCCC-------------------------CCCCcccEEEecCcccccc-----cChH------HHHHHHhhc
Q 009719 180 AFVAMLGTRRLP-------------------------FPAFSFDIVHCSRCLIPFT-----AYNA------TYLIEVDRL 223 (527)
Q Consensus 180 a~~~v~dae~LP-------------------------FpD~SFDlV~cs~~l~hw~-----d~~~------~aL~Ei~RV 223 (527)
+.+.++|...++ +++++||+|+|..++ |+. +... .+|.++.|+
T Consensus 65 v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~-~~~g~~~~d~~~~~~~~~~~l~~~~~~ 143 (201)
T 2plw_A 65 VYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAV-PCIGNKIDDHLNSCELTLSITHFMEQY 143 (201)
T ss_dssp CEEEECCTTTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCC-CCCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEccccchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCc-CCCCCcccCHHHHHHHHHHHHHHHHHH
Confidence 456677887777 788999999998765 442 1111 278999999
Q ss_pred ccCCcEEEEecC
Q 009719 224 LRPGGYLVISGP 235 (527)
Q Consensus 224 LRPGG~lviS~p 235 (527)
|||||.|++...
T Consensus 144 LkpgG~lv~~~~ 155 (201)
T 2plw_A 144 INIGGTYIVKMY 155 (201)
T ss_dssp EEEEEEEEEEEE
T ss_pred ccCCCEEEEEEe
Confidence 999999999654
|
| >3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.00053 Score=73.42 Aligned_cols=76 Identities=26% Similarity=0.264 Sum_probs=53.6
Q ss_pred cChHHHHHHHHHc----CCCcEEeeccccCCC-CCCCcccEEEe----cC--cccc-------cccC--------hHHHH
Q 009719 164 DSHKAQIQFALER----GIPAFVAMLGTRRLP-FPAFSFDIVHC----SR--CLIP-------FTAY--------NATYL 217 (527)
Q Consensus 164 D~seaqvq~A~eR----g~pa~~~v~dae~LP-FpD~SFDlV~c----s~--~l~h-------w~d~--------~~~aL 217 (527)
|.++.+++.|+++ |+.+.+..+|+..++ +.+++||+|++ |- .+.+ |... ...+|
T Consensus 133 Dis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL 212 (464)
T 3m6w_A 133 EVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALL 212 (464)
T ss_dssp CSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHH
Confidence 7788888877654 666667778887776 46789999994 31 1111 2111 13489
Q ss_pred HHHhhcccCCcEEEEecCCCCC
Q 009719 218 IEVDRLLRPGGYLVISGPPVQW 239 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~pp~~~ 239 (527)
.++.|+|||||+|++|+-....
T Consensus 213 ~~a~~~LkpGG~LvysTCs~~~ 234 (464)
T 3m6w_A 213 AQASRLLGPGGVLVYSTCTFAP 234 (464)
T ss_dssp HHHHTTEEEEEEEEEEESCCCG
T ss_pred HHHHHhcCCCcEEEEEeccCch
Confidence 9999999999999999875443
|
| >1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0034 Score=64.11 Aligned_cols=75 Identities=17% Similarity=0.173 Sum_probs=51.9
Q ss_pred eccCcChHHHHHHHHHcC------C---CcEEeeccccC-CC-CCCCcccEEEecCcccccc--cC--hHHHHHHHhhcc
Q 009719 160 FAPRDSHKAQIQFALERG------I---PAFVAMLGTRR-LP-FPAFSFDIVHCSRCLIPFT--AY--NATYLIEVDRLL 224 (527)
Q Consensus 160 iAp~D~seaqvq~A~eRg------~---pa~~~v~dae~-LP-FpD~SFDlV~cs~~l~hw~--d~--~~~aL~Ei~RVL 224 (527)
+...|.++.+++.|+++. . .+.+..+|+.. ++ +++++||+|++... .++. +. ...++.++.|+|
T Consensus 147 V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~-~p~~~~~~l~~~~~l~~~~~~L 225 (334)
T 1xj5_A 147 IDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSS-DPIGPAKELFEKPFFQSVARAL 225 (334)
T ss_dssp EEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEECCC-CTTSGGGGGGSHHHHHHHHHHE
T ss_pred EEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEECCC-CccCcchhhhHHHHHHHHHHhc
Confidence 333477888999988652 1 35667778654 33 46789999998643 2222 11 134999999999
Q ss_pred cCCcEEEEecC
Q 009719 225 RPGGYLVISGP 235 (527)
Q Consensus 225 RPGG~lviS~p 235 (527)
||||.|++...
T Consensus 226 kpgG~lv~~~~ 236 (334)
T 1xj5_A 226 RPGGVVCTQAE 236 (334)
T ss_dssp EEEEEEEEECC
T ss_pred CCCcEEEEecC
Confidence 99999999754
|
| >1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31 | Back alignment and structure |
|---|
Probab=96.70 E-value=0.00099 Score=70.75 Aligned_cols=54 Identities=7% Similarity=-0.055 Sum_probs=38.2
Q ss_pred cEEeeccccCC--CC--CCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 180 AFVAMLGTRRL--PF--PAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 180 a~~~v~dae~L--PF--pD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.+..+|.... +| .+++||+|+++..+ +.++.. .+|.|+.|+|||||++++..+
T Consensus 303 V~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~-~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 303 VEFSLKKSFVDNNRVAELIPQCDVILVNNFL-FDEDLN-KKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp EEEEESSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHH-HHHHHHHTTCCTTCEEEESSC
T ss_pred eEEEEcCccccccccccccCCCCEEEEeCcc-ccccHH-HHHHHHHHhCCCCeEEEEeec
Confidence 44555554332 33 36899999987665 333333 489999999999999999865
|
| >1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33 | Back alignment and structure |
|---|
Probab=96.70 E-value=0.00047 Score=66.00 Aligned_cols=87 Identities=14% Similarity=0.091 Sum_probs=54.5
Q ss_pred eeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhhccc-c-ccccccCCCCCCCCCccchhhhcCcccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYDRGL-I-GVYHDWCEPFSTYPRTYDLIHVSGIESLIK 449 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~eRGL-i-G~~hdwce~fstYPrtyDLiHa~~~fs~~~ 449 (527)
.+|||+|||.|.++..|.+. ..-|. -.|.. ..+..+-+++- + =+..|.. .++.-+.+||+|.+...
T Consensus 87 ~~vLdiG~G~G~~~~~l~~~~~~~~v~---~vD~s~~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~----- 157 (269)
T 1p91_A 87 TAVLDIGCGEGYYTHAFADALPEITTF---GLDVSKVAIKAAAKRYPQVTFCVASSH-RLPFSDTSMDAIIRIYA----- 157 (269)
T ss_dssp CEEEEETCTTSTTHHHHHHTCTTSEEE---EEESCHHHHHHHHHHCTTSEEEECCTT-SCSBCTTCEEEEEEESC-----
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCeEE---EEeCCHHHHHHHHHhCCCcEEEEcchh-hCCCCCCceeEEEEeCC-----
Confidence 47999999999999888654 32222 22322 45555555541 1 1111221 22222378999987422
Q ss_pred CCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 450 NPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 450 ~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
...+-|+-|+|||||.+++.+
T Consensus 158 -----------~~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 158 -----------PCKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp -----------CCCHHHHHHHEEEEEEEEEEE
T ss_pred -----------hhhHHHHHHhcCCCcEEEEEE
Confidence 235789999999999999875
|
| >2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.00022 Score=67.09 Aligned_cols=92 Identities=14% Similarity=0.267 Sum_probs=57.1
Q ss_pred eeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhhc----cc---cc-cccccCCCCCCC--CCccchhhh
Q 009719 375 RNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYDR----GL---IG-VYHDWCEPFSTY--PRTYDLIHV 441 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~eR----GL---iG-~~hdwce~fstY--PrtyDLiHa 441 (527)
.+|||+|||.|.++.+|... .. +|+-.+.. ..+..+-++ |+ +- +..|..+..+.. +.+||+|-+
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALPEA---TIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCTTC---EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred CEEEEecCCCcHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 48999999999999888543 22 22333332 444444443 43 21 122333322222 468999987
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+.... ....+|-++-|+|+|||.+++.+
T Consensus 133 ~~~~~------------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 133 DAAKG------------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EGGGS------------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCCHH------------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 64433 23568888999999999999985
|
| >3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.00071 Score=70.58 Aligned_cols=45 Identities=22% Similarity=0.315 Sum_probs=36.9
Q ss_pred CCCCCCcccEEEecCcccccccCh--------------------------------------HHHHHHHhhcccCCcEEE
Q 009719 190 LPFPAFSFDIVHCSRCLIPFTAYN--------------------------------------ATYLIEVDRLLRPGGYLV 231 (527)
Q Consensus 190 LPFpD~SFDlV~cs~~l~hw~d~~--------------------------------------~~aL~Ei~RVLRPGG~lv 231 (527)
-.||++|||+|+++.+| ||..+. ..+|+...|+|||||+++
T Consensus 144 rlfP~~S~d~v~Ss~aL-HWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mv 222 (374)
T 3b5i_A 144 RLFPARTIDFFHSAFSL-HWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMF 222 (374)
T ss_dssp CCSCTTCEEEEEEESCT-TBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred ccCCCcceEEEEeccee-eeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 45999999999999997 885421 125888999999999999
Q ss_pred EecC
Q 009719 232 ISGP 235 (527)
Q Consensus 232 iS~p 235 (527)
++..
T Consensus 223 l~~~ 226 (374)
T 3b5i_A 223 LVCL 226 (374)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9765
|
| >3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.00056 Score=64.94 Aligned_cols=104 Identities=12% Similarity=0.145 Sum_probs=66.9
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCC-CchhHhhhc----cccc----cccccCCCCCCCCCccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKS-STLSVIYDR----GLIG----VYHDWCEPFSTYPRTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~-ntl~vi~eR----GLiG----~~hdwce~fstYPrtyDLiHa~ 442 (527)
.+|+|+|||.|.++.+|... ..-|..+ |.. ..+..+-++ |+-. ...|..+.|+ ..+||+|-++
T Consensus 95 ~~vldiG~G~G~~~~~l~~~~~~~~~v~~~---D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~D~v~~~ 169 (255)
T 3mb5_A 95 DFIVEAGVGSGALTLFLANIVGPEGRVVSY---EIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIE--EENVDHVILD 169 (255)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEE---CSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCC--CCSEEEEEEC
T ss_pred CEEEEecCCchHHHHHHHHHhCCCeEEEEE---ecCHHHHHHHHHHHHHcCCCCceEEEECchhhccC--CCCcCEEEEC
Confidence 57999999999999988654 3333332 332 444444443 5432 3345555543 3679998763
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-CHHHHHHHHHHHhcCC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDKVSRIANTVR 497 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~i~~i~~~l~ 497 (527)
. -....+|-++-|+|+|||.+++.. ..+...++.+.++...
T Consensus 170 -----~---------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 170 -----L---------PQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp -----S---------SCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred -----C---------CCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 1 122568999999999999999875 4555666666655554
|
| >1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32 | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0024 Score=58.48 Aligned_cols=84 Identities=7% Similarity=-0.105 Sum_probs=54.9
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccC-hHHHHHHHh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY-NATYLIEVD 221 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~-~~~aL~Ei~ 221 (527)
.|.++.+|...+.. .+...|.++.+++.|+++...+.+.++|+..+| ++||+|++.-.++|+.+. ...++.++.
T Consensus 62 ~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~ 136 (200)
T 1ne2_A 62 NGILACGSYLLGAE--SVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGSVVKHSDRAFIDKAF 136 (200)
T ss_dssp TCHHHHHHHHTTBS--EEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC-------CHHHHHHHH
T ss_pred ccHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchhccCchhHHHHHHHH
Confidence 34444455555432 233337788999999887545677888888876 799999999888777542 234899999
Q ss_pred hcccCCcEEEEe
Q 009719 222 RLLRPGGYLVIS 233 (527)
Q Consensus 222 RVLRPGG~lviS 233 (527)
|+| |+.+++.
T Consensus 137 ~~~--g~~~~~~ 146 (200)
T 1ne2_A 137 ETS--MWIYSIG 146 (200)
T ss_dssp HHE--EEEEEEE
T ss_pred Hhc--CcEEEEE
Confidence 999 6644444
|
| >3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0016 Score=66.63 Aligned_cols=88 Identities=14% Similarity=0.100 Sum_probs=58.8
Q ss_pred hcccccccc--CCeeEEeeccCcChHHHHHHHHHcC-C----CcEEeeccccCC--CCCCCcccEEEecCcccccccC--
Q 009719 144 ASFGGSMLS--ENILTLSFAPRDSHKAQIQFALERG-I----PAFVAMLGTRRL--PFPAFSFDIVHCSRCLIPFTAY-- 212 (527)
Q Consensus 144 gsfga~Ll~--r~V~~msiAp~D~seaqvq~A~eRg-~----pa~~~v~dae~L--PFpD~SFDlV~cs~~l~hw~d~-- 212 (527)
|+.+.+|+. .++. +...|+++.+++.|+++- . .+.+.++|+... .+++++||+|++... .|+...
T Consensus 101 G~la~~la~~~p~~~---v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~-~~~~~~~~ 176 (317)
T 3gjy_A 101 CTMARYFADVYPQSR---NTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVF-AGAITPQN 176 (317)
T ss_dssp GHHHHHHHHHSTTCE---EEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCS-TTSCCCGG
T ss_pred CHHHHHHHHHCCCcE---EEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCC-Cccccchh
Confidence 444445555 2442 333477889999998863 1 245677786553 467899999998643 232211
Q ss_pred --hHHHHHHHhhcccCCcEEEEecC
Q 009719 213 --NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 213 --~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
...++.++.|+|||||.|++...
T Consensus 177 L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 177 FTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp GSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhHHHHHHHHHHhcCCCcEEEEEec
Confidence 13499999999999999998654
|
| >3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.00014 Score=67.33 Aligned_cols=92 Identities=14% Similarity=0.126 Sum_probs=54.5
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCCCchhHhh----hccccc---cc-cccCCCCCCCCCccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKSSTLSVIY----DRGLIG---VY-HDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~ntl~vi~----eRGLiG---~~-hdwce~fstYPrtyDLiHa~~ 443 (527)
++|||+|||.|.++.+|... ..-|..|-.. +..+.++- +.|+-. +. .|..+.++..+. ||+|.++.
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISSRVVMIDPD--RDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTCEEEEEESC--HHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECC--HHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 58999999999999888654 2222222211 12233222 224321 11 123232233456 99997752
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
- .-....++-++-|+|+|||.+++.+
T Consensus 135 ~------------~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 135 D------------VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp T------------TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred C------------hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 1 2234677888899999999999965
|
| >3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.00094 Score=63.47 Aligned_cols=68 Identities=21% Similarity=0.219 Sum_probs=48.5
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccc----cCCCCCC--CcccEEEecCcccccccChHHHHHHHhhcccCCcEEE
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGT----RRLPFPA--FSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLV 231 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~da----e~LPFpD--~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lv 231 (527)
|.++.+++.|+++ |+. +.+.++++ ..+++.+ ++||+|++.... .....++.++.|+|||||+++
T Consensus 104 D~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~~d~~~----~~~~~~l~~~~~~LkpgG~lv 179 (232)
T 3cbg_A 104 DQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLIFIDADK----RNYPRYYEIGLNLLRRGGLMV 179 (232)
T ss_dssp ESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEEEECSCG----GGHHHHHHHHHHTEEEEEEEE
T ss_pred ECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEEEECCCH----HHHHHHHHHHHHHcCCCeEEE
Confidence 6677888888754 543 45666664 3455655 899999987542 222348999999999999999
Q ss_pred EecC
Q 009719 232 ISGP 235 (527)
Q Consensus 232 iS~p 235 (527)
+...
T Consensus 180 ~~~~ 183 (232)
T 3cbg_A 180 IDNV 183 (232)
T ss_dssp EECT
T ss_pred EeCC
Confidence 9653
|
| >3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.00012 Score=66.72 Aligned_cols=122 Identities=15% Similarity=0.073 Sum_probs=67.7
Q ss_pred cchhhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc--c
Q 009719 347 FEADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL--I 419 (527)
Q Consensus 347 f~~d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL--i 419 (527)
|...++...+.+-++..... ... =.+|||+|||.|.++.++.+.+.. .|+-.|.. ..+..+-+ .|+ +
T Consensus 22 ~rp~~~~~~~~l~~~l~~~~--~~~--~~~vLDlgcG~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~v 95 (189)
T 3p9n_A 22 TRPTTDRVRESLFNIVTARR--DLT--GLAVLDLYAGSGALGLEALSRGAA--SVLFVESDQRSAAVIARNIEALGLSGA 95 (189)
T ss_dssp C---CHHHHHHHHHHHHHHS--CCT--TCEEEEETCTTCHHHHHHHHTTCS--EEEEEECCHHHHHHHHHHHHHHTCSCE
T ss_pred CccCcHHHHHHHHHHHHhcc--CCC--CCEEEEeCCCcCHHHHHHHHCCCC--eEEEEECCHHHHHHHHHHHHHcCCCce
Confidence 45566667666665554321 012 247999999999999866555432 12222222 33333322 243 1
Q ss_pred ccc-cccCCCCCCC-CCccchhhhcCccccccCCCCCCCCCcccccceeecc--cccCCcEEEEeCC
Q 009719 420 GVY-HDWCEPFSTY-PRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDR--MLRPEGTVVVRDS 482 (527)
Q Consensus 420 G~~-hdwce~fstY-PrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDR--ILRP~G~~iird~ 482 (527)
-++ .|..+....+ +.+||+|-++..|... .-.+..++-++-| +|+|||.+++...
T Consensus 96 ~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~--------~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 96 TLRRGAVAAVVAAGTTSPVDLVLADPPYNVD--------SADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp EEEESCHHHHHHHCCSSCCSEEEECCCTTSC--------HHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred EEEEccHHHHHhhccCCCccEEEECCCCCcc--------hhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 111 1222111113 4789999887655421 1234678888888 9999999999753
|
| >2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.00092 Score=62.78 Aligned_cols=106 Identities=9% Similarity=0.034 Sum_probs=66.5
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc---c-ccccccCCCCCCCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL---I-GVYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL---i-G~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
.+|||+|||.|.++.+|.+... +|+-.|.. ..+..+-++ |+ + -...|..+.+. -...||+|-++.
T Consensus 93 ~~vldiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~v~~~~-- 166 (248)
T 2yvl_A 93 KRVLEFGTGSGALLAVLSEVAG---EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV-PEGIFHAAFVDV-- 166 (248)
T ss_dssp CEEEEECCTTSHHHHHHHHHSS---EEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC-CTTCBSEEEECS--
T ss_pred CEEEEeCCCccHHHHHHHHhCC---EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc-CCCcccEEEECC--
Confidence 4899999999999988876532 34444433 455555443 33 1 12234444320 136899987631
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-HHHHHHHHHHHhcCCce
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-PEVIDKVSRIANTVRWT 499 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-~~~~~~i~~i~~~l~W~ 499 (527)
-+...++-++-|+|+|||.+++... .+.+.++.+.++.. |.
T Consensus 167 ------------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~-f~ 208 (248)
T 2yvl_A 167 ------------REPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY-FG 208 (248)
T ss_dssp ------------SCGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT-EE
T ss_pred ------------cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh-CC
Confidence 1235688889999999999999865 45566666665544 44
|
| >1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.003 Score=62.94 Aligned_cols=89 Identities=10% Similarity=0.045 Sum_probs=56.4
Q ss_pred hccccccccC-CeeEEeeccCcChHHHHHHHHHcC---------CCcEEeeccccC-CCCCCCcccEEEecCccccccc-
Q 009719 144 ASFGGSMLSE-NILTLSFAPRDSHKAQIQFALERG---------IPAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTA- 211 (527)
Q Consensus 144 gsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eRg---------~pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d- 211 (527)
|..+..++.+ +.. .+...|.++.+++.|+++- ..+.+..+|+.. ++..+++||+|++... .+|..
T Consensus 102 G~~~~~l~~~~~~~--~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~-~~~~~~ 178 (296)
T 1inl_A 102 GGTLREVLKHDSVE--KAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIIDST-DPTAGQ 178 (296)
T ss_dssp CHHHHHHTTSTTCS--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEEC--------
T ss_pred CHHHHHHHhcCCCC--EEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEcCC-CcccCc
Confidence 4444455554 221 2333367788888887652 134566777654 5667789999998532 23221
Q ss_pred ----ChHHHHHHHhhcccCCcEEEEecC
Q 009719 212 ----YNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 212 ----~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
....++.++.|+|||||.|++...
T Consensus 179 ~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 179 GGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp ---CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred hhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 113489999999999999999764
|
| >4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0033 Score=63.93 Aligned_cols=67 Identities=15% Similarity=0.114 Sum_probs=52.4
Q ss_pred HHHHHHHHHcC----C-CcEEeeccccCCCCCCCcccEEEecCcccccccChH-HHHHHHhhcccCCcEEEEecC
Q 009719 167 KAQIQFALERG----I-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA-TYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 167 eaqvq~A~eRg----~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~-~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.+++.|+++- . .+.+..+|....|+++ +|+++++.++|+|++... .+|+++.|+|+|||++++...
T Consensus 212 p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~~--~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~ 284 (353)
T 4a6d_A 212 PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPE--ADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIES 284 (353)
T ss_dssp HHHHHHHHHHSCC--CCSEEEEESCTTTSCCCC--CSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred HHHHHHHHHhhhhcccCceeeecCccccCCCCC--ceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEe
Confidence 56788887652 1 2456677876666664 699999999999988753 489999999999999999765
|
| >1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.00038 Score=70.83 Aligned_cols=97 Identities=14% Similarity=0.200 Sum_probs=61.4
Q ss_pred CCCeeeEeecCCCccchhhhccCC--CeeEEEecCCCCCCchhHhhh-ccccccccccCCCCCCCCCccchhhhcCcccc
Q 009719 371 TPAIRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKSSTLSVIYD-RGLIGVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 371 ~~~iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~ntl~vi~e-RGLiG~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
......|+|+|||.|.++.+|.+. .+-+..+= -+..+..+-+ .++--+.+|..++ +|. ||+|.+..++-.
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D---~~~~~~~a~~~~~v~~~~~d~~~~---~~~-~D~v~~~~~lh~ 279 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFD---LPQVIENAPPLSGIEHVGGDMFAS---VPQ-GDAMILKAVCHN 279 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEE---CHHHHTTCCCCTTEEEEECCTTTC---CCC-EEEEEEESSGGG
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeC---hHHHHHhhhhcCCCEEEeCCcccC---CCC-CCEEEEeccccc
Confidence 345689999999999999998543 33332111 1111111111 1222233444443 455 999999999987
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
|.+ . ....+|-++=|+|+|||.++|.|
T Consensus 280 ~~d-----~--~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 280 WSD-----E--KCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp SCH-----H--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCH-----H--HHHHHHHHHHHhcCCCCEEEEEE
Confidence 741 1 12378999999999999999874
|
| >2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0024 Score=63.13 Aligned_cols=90 Identities=11% Similarity=0.108 Sum_probs=58.0
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcCC---------CcEEeeccccC-CCCCCCcccEEEecCcccccccCh
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI---------PAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAYN 213 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~---------pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~~ 213 (527)
|..+..++...- ...+...|.++.+++.|+++-. .+.+..+|+.. ++..+++||+|++... .|+....
T Consensus 90 G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~-~~~~~~~ 167 (283)
T 2i7c_A 90 GGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSS-DPIGPAE 167 (283)
T ss_dssp SHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECC-CTTTGGG
T ss_pred CHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEcCC-CCCCcch
Confidence 444444554420 1133334778899999987621 24566677654 4445789999998643 3432221
Q ss_pred ----HHHHHHHhhcccCCcEEEEecC
Q 009719 214 ----ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 214 ----~~aL~Ei~RVLRPGG~lviS~p 235 (527)
..++.++.|+|||||.+++...
T Consensus 168 ~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 168 TLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp GGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred hhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 3499999999999999999865
|
| >2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0022 Score=63.79 Aligned_cols=101 Identities=15% Similarity=0.104 Sum_probs=52.2
Q ss_pred eeeEeecCCCccchhhhccCC-CeeEEEecCCC--CC-CchhH-hhhcccccc--ccccCCCCCCCCCccchhhhcCccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-PVWVMNVVPAR--KS-STLSV-IYDRGLIGV--YHDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~--~~-ntl~v-i~eRGLiG~--~hdwce~fstYPrtyDLiHa~~~fs 446 (527)
-..|||+|||.|+|+..|.+. .|.-+-+-|.. +. +.+.. .+.-++.-+ -.|-. .++ +.+||+|-|+..+.
T Consensus 83 g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~-~l~--~~~fD~Vvsd~~~~ 159 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQPNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVT-KME--PFQADTVLCDIGES 159 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGG-GCC--CCCCSEEEECCCCC
T ss_pred CCEEEEeccCCCHHHHHHHHcCCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHh-hCC--CCCcCEEEECCCcC
Confidence 358999999999998888665 45555444421 00 10000 000011111 11211 133 57899998874421
Q ss_pred cccCCCCCCCCCcccccceeecccccCCc--EEEEe
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEG--TVVVR 480 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G--~~iir 480 (527)
.-. ...+.=....+|-|+.|+|+||| .+++.
T Consensus 160 ~~~---~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 160 NPT---AAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp CSC---HHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CCc---hhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 000 00000000126778999999999 88885
|
| >2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0011 Score=66.47 Aligned_cols=89 Identities=12% Similarity=0.098 Sum_probs=56.4
Q ss_pred hhccccccccCC-eeEEeeccCcChHHHHHHHHHcC---------CCcEEeeccccC-CCCCCCcccEEEecCccccccc
Q 009719 143 VASFGGSMLSEN-ILTLSFAPRDSHKAQIQFALERG---------IPAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTA 211 (527)
Q Consensus 143 vgsfga~Ll~r~-V~~msiAp~D~seaqvq~A~eRg---------~pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d 211 (527)
.|.++..|+.+. .. .+...|.++.+++.|+++- ..+.+..+|+.. |+..+++||+|++... .|+..
T Consensus 106 ~G~~~~~l~~~~~~~--~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d~~-~~~~~ 182 (304)
T 2o07_A 106 DGGVLREVVKHPSVE--SVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITDSS-DPMGP 182 (304)
T ss_dssp TSHHHHHHTTCTTCC--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEEECC------
T ss_pred chHHHHHHHHcCCCC--EEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEECCC-CCCCc
Confidence 344444555542 11 2333367788999888652 124566777654 6667899999998643 33321
Q ss_pred C----hHHHHHHHhhcccCCcEEEEec
Q 009719 212 Y----NATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 212 ~----~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
. ...++.++.|+|||||.|++..
T Consensus 183 ~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 183 AESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp ------CHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhhHHHHHHHHHhccCCCeEEEEec
Confidence 1 1238999999999999999976
|
| >1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A | Back alignment and structure |
|---|
Probab=96.60 E-value=0.00093 Score=69.81 Aligned_cols=75 Identities=20% Similarity=0.177 Sum_probs=50.9
Q ss_pred cChHHHHHHHHHc----CCCcEEeeccccCCC--CCCCcccEEEe----cC--cccccccC---------------hHHH
Q 009719 164 DSHKAQIQFALER----GIPAFVAMLGTRRLP--FPAFSFDIVHC----SR--CLIPFTAY---------------NATY 216 (527)
Q Consensus 164 D~seaqvq~A~eR----g~pa~~~v~dae~LP--FpD~SFDlV~c----s~--~l~hw~d~---------------~~~a 216 (527)
|.++.+++.++++ |+.+.+..+|+..++ |++++||+|++ +. .+.+-++. ...+
T Consensus 277 D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~ 356 (429)
T 1sqg_A 277 DIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 (429)
T ss_dssp ESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHH
Confidence 4444555555433 666777788988887 78889999995 32 22221110 0248
Q ss_pred HHHHhhcccCCcEEEEecCCCC
Q 009719 217 LIEVDRLLRPGGYLVISGPPVQ 238 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~pp~~ 238 (527)
|.++.++|||||++++++....
T Consensus 357 L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 357 LDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp HHHHGGGEEEEEEEEEEESCCC
T ss_pred HHHHHHhcCCCCEEEEEECCCC
Confidence 9999999999999999986433
|
| >3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.00076 Score=64.29 Aligned_cols=127 Identities=15% Similarity=0.111 Sum_probs=69.9
Q ss_pred eEeecCCCccchhhhccCC---CeeEEEecCCCCCCchhHh----hhcccc----ccc-cccCCCCCCC-CCccchhhhc
Q 009719 376 NIMDMNAFFGGFAAALTSD---PVWVMNVVPARKSSTLSVI----YDRGLI----GVY-HDWCEPFSTY-PRTYDLIHVS 442 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~ntl~vi----~eRGLi----G~~-hdwce~fstY-PrtyDLiHa~ 442 (527)
+|||+|||.|.++.+|... .--|..|=... ..+.++ -+.|+- -+. .|-.+.++.+ +.+||+|-++
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~--~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPES--EHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCH--HHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCH--HHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 8999999999988877531 22222222111 222222 122332 111 1111222334 4789999765
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC------------HHHHHHHHHHHhcCCce----eEEecCC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS------------PEVIDKVSRIANTVRWT----AAVHDKE 506 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~------------~~~~~~i~~i~~~l~W~----~~~~~~e 506 (527)
.-.. ....++-++-|+|||||.+++.|- ......++++.+.+++. +.+..
T Consensus 137 ~~~~------------~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp-- 202 (221)
T 3dr5_A 137 VSPM------------DLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARLP-- 202 (221)
T ss_dssp CCTT------------THHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEES--
T ss_pred CcHH------------HHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEee--
Confidence 3222 234577788899999999999752 11233455555555544 44431
Q ss_pred CCCCCCceEEEEEecc
Q 009719 507 PGSNGREKILVATKSL 522 (527)
Q Consensus 507 ~~~~~~ekiLi~~K~~ 522 (527)
-.+.+++++|.+
T Consensus 203 ----~gdGl~~~~~~~ 214 (221)
T 3dr5_A 203 ----LGAGLTVVTKAL 214 (221)
T ss_dssp ----STTCEEEEEECC
T ss_pred ----ccchHHHHHHHH
Confidence 135799999875
|
| >2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.00063 Score=61.58 Aligned_cols=139 Identities=14% Similarity=0.126 Sum_probs=62.9
Q ss_pred eeEeecCCCccchhhhccCC-------------CeeEEEecCCCCCCchhHhhhccccccccccCCC-C-----CCCC-C
Q 009719 375 RNIMDMNAFFGGFAAALTSD-------------PVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEP-F-----STYP-R 434 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-------------~VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwce~-f-----stYP-r 434 (527)
.+|||+|||.|.++.+|.+. .|+.+-+.|......+.++ . -.|..+. + ..++ .
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~-~------~~d~~~~~~~~~~~~~~~~~ 96 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFL-C------PADVTDPRTSQRILEVLPGR 96 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEE-C------SCCTTSHHHHHHHHHHSGGG
T ss_pred CEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEE-E------eccCCCHHHHHHHHHhcCCC
Confidence 58999999999999888543 2444433332111111111 0 1111110 0 0023 5
Q ss_pred ccchhhhcCccccccCCCCCC--CCCcccccceeecccccCCcEEEEeCC-HHHHHHHHHHHhcCCceeEEe-cCCCCCC
Q 009719 435 TYDLIHVSGIESLIKNPGSNK--NSCSLVDLMVEMDRMLRPEGTVVVRDS-PEVIDKVSRIANTVRWTAAVH-DKEPGSN 510 (527)
Q Consensus 435 tyDLiHa~~~fs~~~~~~~~~--~rC~~~~illEmDRILRP~G~~iird~-~~~~~~i~~i~~~l~W~~~~~-~~e~~~~ 510 (527)
+||+|-++..+........+. .......+|-|+-|+|||||.+++.+- .+....+.+.++..--++... +....+.
T Consensus 97 ~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~f~~v~~~~~~~~~~~ 176 (196)
T 2nyu_A 97 RADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEEFQNVRIIKPEASRKE 176 (196)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHHEEEEEEECCC-----
T ss_pred CCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHHhcceEEECCcccCcc
Confidence 899998865332100000000 000013578889999999999999842 112223333333221122222 2222233
Q ss_pred CCceEEEEEe
Q 009719 511 GREKILVATK 520 (527)
Q Consensus 511 ~~ekiLi~~K 520 (527)
..|..+++..
T Consensus 177 ~~e~~~v~~g 186 (196)
T 2nyu_A 177 SSEVYFLATQ 186 (196)
T ss_dssp ---EEEEEEE
T ss_pred CceEEEEeee
Confidence 4677777654
|
| >3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A* | Back alignment and structure |
|---|
Probab=96.58 E-value=0.001 Score=74.31 Aligned_cols=96 Identities=16% Similarity=0.154 Sum_probs=65.5
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC---cEEeeccccC-CCCCCCcccEEEecCcc--------
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP---AFVAMLGTRR-LPFPAFSFDIVHCSRCL-------- 206 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p---a~~~v~dae~-LPFpD~SFDlV~cs~~l-------- 206 (527)
+|.|+-+++..|.. .+...|.++.+++.|+++ |+. +.+.++|+.. |+..+++||+|++.--.
T Consensus 550 tG~~sl~aa~~ga~--~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~f~~~~~~~ 627 (703)
T 3v97_A 550 TGSATVHAGLGGAR--STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRME 627 (703)
T ss_dssp TCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCCSBC------
T ss_pred hhHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCccccCCccch
Confidence 66677666766653 233337788899888764 554 5677788755 67778999999985311
Q ss_pred --cccccChHHHHHHHhhcccCCcEEEEecCCCCCC
Q 009719 207 --IPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWP 240 (527)
Q Consensus 207 --~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp~~~~ 240 (527)
.+....-..++.++.|+|||||+|+++.....+.
T Consensus 628 ~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~ 663 (703)
T 3v97_A 628 DAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFR 663 (703)
T ss_dssp -CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCC
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccc
Confidence 1111122237899999999999999998764444
|
| >3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.00035 Score=74.70 Aligned_cols=109 Identities=14% Similarity=0.175 Sum_probs=64.4
Q ss_pred HHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCe-eEEEecCCCCCCchh----Hhhhccc---cccc-cccCCCCC
Q 009719 360 YYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKSSTLS----VIYDRGL---IGVY-HDWCEPFS 430 (527)
Q Consensus 360 ~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~ntl~----vi~eRGL---iG~~-hdwce~fs 430 (527)
.|.+.+...+....-..|||+|||.|.++..|...+. -|.-|= ....+. .+.+.|+ |-+. .|+.+ +
T Consensus 145 ~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD---~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~-~- 219 (480)
T 3b3j_A 145 TYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVE---ASTMAQHAEVLVKSNNLTDRIVVIPGKVEE-V- 219 (480)
T ss_dssp HHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEE---CHHHHHHHHHHHHHTTCTTTEEEEESCTTT-C-
T ss_pred HHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEE---cHHHHHHHHHHHHHcCCCCcEEEEECchhh-C-
Confidence 3554443333222335899999999999988876553 232222 111222 2333455 2222 23333 2
Q ss_pred CCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 431 TYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 431 tYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
.+|..||+|-+..++..+. .-.+...+.++-|+|+|||.+++.
T Consensus 220 ~~~~~fD~Ivs~~~~~~~~-------~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 220 SLPEQVDIIISEPMGYMLF-------NERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp CCSSCEEEEECCCCHHHHT-------CHHHHHHHHHGGGGEEEEEEEESC
T ss_pred ccCCCeEEEEEeCchHhcC-------cHHHHHHHHHHHHhcCCCCEEEEE
Confidence 2467899999977655442 113455777999999999999853
|
| >3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A* | Back alignment and structure |
|---|
Probab=96.56 E-value=0.00096 Score=68.12 Aligned_cols=95 Identities=19% Similarity=0.186 Sum_probs=61.7
Q ss_pred CCCeeeEeecCCCccchhhhccCC--C--eeEEEecCCCCCCchhHhhhc-cccccccccCCCCCCCCCccchhhhcCcc
Q 009719 371 TPAIRNIMDMNAFFGGFAAALTSD--P--VWVMNVVPARKSSTLSVIYDR-GLIGVYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 371 ~~~iRnvmDm~ag~GgFaAaL~~~--~--VwvMnvvp~~~~ntl~vi~eR-GLiG~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
....+.|+|+|||.|.++.+|.+. . +.+.-+ | ..+..+-++ ++-=+-+|.-++ +|.. |+|.+..++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~D~~~~---~p~~-D~v~~~~vl 269 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-P----HVISEAPQFPGVTHVGGDMFKE---VPSG-DTILMKWIL 269 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H----HHHTTCCCCTTEEEEECCTTTC---CCCC-SEEEEESCG
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-H----HHHHhhhhcCCeEEEeCCcCCC---CCCC-CEEEehHHh
Confidence 556789999999999999999542 2 333333 2 111111111 222233444443 4555 999999999
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
-.|. + -....+|-++=|.|+|||.++|-|
T Consensus 270 h~~~------d-~~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 270 HDWS------D-QHCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp GGSC------H-HHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ccCC------H-HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 8774 1 123578999999999999999975
|
| >1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A | Back alignment and structure |
|---|
Probab=96.55 E-value=0.00073 Score=63.80 Aligned_cols=130 Identities=15% Similarity=0.196 Sum_probs=66.5
Q ss_pred eeEeecCCCccchhhhccCC-C---eeEEEecCCCCCCchhHhhhc-----cccccccccCCCC--CCCCCccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTSD-P---VWVMNVVPARKSSTLSVIYDR-----GLIGVYHDWCEPF--STYPRTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~---VwvMnvvp~~~~ntl~vi~eR-----GLiG~~hdwce~f--stYPrtyDLiHa~~ 443 (527)
.+|||+|||.|.++..|.+. + |..+-+.| ..+..+-++ .+.-+..|-.++. ..++.+||+|-.+
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~----~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~- 150 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIADKGIVYAIEYAP----RIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYED- 150 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTTTSEEEEEESCH----HHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEEC-
T ss_pred CEEEEEcccCCHHHHHHHHHcCCcEEEEEECCH----HHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEe-
Confidence 47999999999999888544 2 33333332 212211111 1111122322210 1124679997621
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEe----CC-----HH--HHHHHHHHHhcCCceeEE-ecCCCCCCC
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR----DS-----PE--VIDKVSRIANTVRWTAAV-HDKEPGSNG 511 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir----d~-----~~--~~~~i~~i~~~l~W~~~~-~~~e~~~~~ 511 (527)
+. +.=....+|-++-|+|+|||.+++. .. .. .-+.++ ++....++... .+.+.. ..
T Consensus 151 -~~---------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~~~~-~~ 218 (230)
T 1fbn_A 151 -VA---------QPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDIEPF-EK 218 (230)
T ss_dssp -CC---------STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEECTTT-ST
T ss_pred -cC---------ChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEccCCC-cc
Confidence 11 1001245688999999999999993 21 11 124455 44544555432 233222 12
Q ss_pred CceEEEEEec
Q 009719 512 REKILVATKS 521 (527)
Q Consensus 512 ~ekiLi~~K~ 521 (527)
.--+++++|+
T Consensus 219 ~~~~v~~~k~ 228 (230)
T 1fbn_A 219 DHVMFVGIWE 228 (230)
T ss_dssp TEEEEEEEEC
T ss_pred ceEEEEEEeC
Confidence 3457778874
|
| >1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.00051 Score=64.02 Aligned_cols=89 Identities=16% Similarity=0.150 Sum_probs=51.6
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCCCchhHhhhc----c--------ccccccccCCCCCCCCCccchh
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKSSTLSVIYDR----G--------LIGVYHDWCEPFSTYPRTYDLI 439 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~ntl~vi~eR----G--------LiG~~hdwce~fstYPrtyDLi 439 (527)
.+|||+|||.|.+++.|... ..-|..+-.. +..+..+-++ | +--+..|..+.+. -+.+||+|
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~i 155 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVGCTGKVIGIDHI--KELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA-EEAPYDAI 155 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTTCEEEEEESC--HHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG-GGCCEEEE
T ss_pred CEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCC--HHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc-cCCCcCEE
Confidence 48999999999999888542 1222222211 1223333221 1 1112223332211 13679999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+++..+. .++-++-|+|+|||.+++.-
T Consensus 156 ~~~~~~~---------------~~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 156 HVGAAAP---------------VVPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp EECSBBS---------------SCCHHHHHTEEEEEEEEEEE
T ss_pred EECCchH---------------HHHHHHHHhcCCCcEEEEEE
Confidence 9865442 35567889999999999964
|
| >1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0013 Score=64.08 Aligned_cols=108 Identities=11% Similarity=0.107 Sum_probs=66.7
Q ss_pred eeeEeecCCCccchhhhccCC---CeeEEEecCCCCC-CchhHhhhc-----cc--cc-cccccCCCCCCCCCccchhhh
Q 009719 374 IRNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKS-STLSVIYDR-----GL--IG-VYHDWCEPFSTYPRTYDLIHV 441 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~-ntl~vi~eR-----GL--iG-~~hdwce~fstYPrtyDLiHa 441 (527)
-.+|||+|||.|+++..|.+. ..-|.- .|.. ..+..+-++ |+ +- ...|..+.++ +.+||+|-+
T Consensus 111 ~~~VLD~G~G~G~~~~~la~~~~~~~~v~~---vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~--~~~fD~Vi~ 185 (275)
T 1yb2_A 111 GMDILEVGVGSGNMSSYILYALNGKGTLTV---VERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFIS--DQMYDAVIA 185 (275)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHTTSSEEEE---ECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCC--SCCEEEEEE
T ss_pred cCEEEEecCCCCHHHHHHHHHcCCCCEEEE---EECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCc--CCCccEEEE
Confidence 358999999999999888654 232222 2332 444444433 43 11 2234444332 268999876
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHH-HHHHHHHHHhcCCcee
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPE-VIDKVSRIANTVRWTA 500 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~-~~~~i~~i~~~l~W~~ 500 (527)
+ .. +...+|-++-|+|+|||.+++.+... ...++.+.++...|..
T Consensus 186 ~-----~~---------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~ 231 (275)
T 1yb2_A 186 D-----IP---------DPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHH 231 (275)
T ss_dssp C-----CS---------CGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEE
T ss_pred c-----Cc---------CHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeE
Confidence 2 11 12568889999999999999987543 5566666666555553
|
| >3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A* | Back alignment and structure |
|---|
Probab=96.51 E-value=0.00051 Score=65.66 Aligned_cols=98 Identities=13% Similarity=0.081 Sum_probs=50.1
Q ss_pred eeEeecCCCccchhhhcc--CCCeeEEEecCCCCC-Cch-hHh-------hhcccccc--ccccCCCCCC-CCCccchhh
Q 009719 375 RNIMDMNAFFGGFAAALT--SDPVWVMNVVPARKS-STL-SVI-------YDRGLIGV--YHDWCEPFST-YPRTYDLIH 440 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~--~~~VwvMnvvp~~~~-ntl-~vi-------~eRGLiG~--~hdwce~fst-YPrtyDLiH 440 (527)
..|||+|||.|.++.+|. ....-|.-| |.. ..+ .++ .+.|+-.+ .+.=.+.++. +...+|.++
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~~~~~v~Gv---D~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAINDQNTFYIGI---DPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTCTTEEEEEE---CSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CEEEEEeccCcHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 679999999999999987 444434333 322 322 222 23454221 1111122211 113344444
Q ss_pred hcCccccccCCCCCCCCCcccccceeecccccCCcEEEE
Q 009719 441 VSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVV 479 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~ii 479 (527)
....+.... ...+-....+|-|+-|+|||||.+++
T Consensus 103 ~~~~~~~~~----~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 103 ILFPWGTLL----EYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EESCCHHHH----HHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EeCCCcHHh----hhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 321110000 00011124578999999999999999
|
| >1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.00068 Score=65.60 Aligned_cols=67 Identities=16% Similarity=0.128 Sum_probs=47.0
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccC-CCC------CCCcccEEEecCcccccccChHHHHHHHhhcccCCcEE
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRR-LPF------PAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYL 230 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~-LPF------pD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~l 230 (527)
|.++.+++.|+++ |+. +.+..+++.. ||. ++++||+|++.... .....++.++.|+|||||++
T Consensus 111 D~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~~~----~~~~~~l~~~~~~LkpGG~l 186 (247)
T 1sui_A 111 DINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDADK----DNYLNYHKRLIDLVKVGGVI 186 (247)
T ss_dssp ESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEEEECSCS----TTHHHHHHHHHHHBCTTCCE
T ss_pred ECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEEEEEcCch----HHHHHHHHHHHHhCCCCeEE
Confidence 5566777777653 552 4566677644 453 26899999987432 22234999999999999999
Q ss_pred EEec
Q 009719 231 VISG 234 (527)
Q Consensus 231 viS~ 234 (527)
++..
T Consensus 187 v~d~ 190 (247)
T 1sui_A 187 GYDN 190 (247)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9864
|
| >2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0016 Score=65.98 Aligned_cols=75 Identities=15% Similarity=0.062 Sum_probs=50.5
Q ss_pred eccCcChHHHHHHHHHcCC---------CcEEeeccccC-CCCCCCcccEEEecCcccccccCh----HHHHHHHhhccc
Q 009719 160 FAPRDSHKAQIQFALERGI---------PAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAYN----ATYLIEVDRLLR 225 (527)
Q Consensus 160 iAp~D~seaqvq~A~eRg~---------pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~~----~~aL~Ei~RVLR 225 (527)
+...|.++.+++.|+++-. .+.+..+|+.. |+.++++||+|++... .|+.... ..++.++.|+||
T Consensus 135 v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~~-~~~~~~~~l~t~~~l~~~~~~Lk 213 (314)
T 2b2c_A 135 VTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITDSS-DPVGPAESLFGQSYYELLRDALK 213 (314)
T ss_dssp EEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEECCC--------------HHHHHHHHEE
T ss_pred EEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEcCC-CCCCcchhhhHHHHHHHHHhhcC
Confidence 3344778899999987631 24566677654 5567889999998653 3443221 348999999999
Q ss_pred CCcEEEEecC
Q 009719 226 PGGYLVISGP 235 (527)
Q Consensus 226 PGG~lviS~p 235 (527)
|||.+++...
T Consensus 214 pgG~lv~~~~ 223 (314)
T 2b2c_A 214 EDGILSSQGE 223 (314)
T ss_dssp EEEEEEEECC
T ss_pred CCeEEEEECC
Confidence 9999999763
|
| >4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0024 Score=66.69 Aligned_cols=90 Identities=16% Similarity=0.052 Sum_probs=60.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCC-CCCCCcccEEEecCccccc--------
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRL-PFPAFSFDIVHCSRCLIPF-------- 209 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~L-PFpD~SFDlV~cs~~l~hw-------- 209 (527)
+|.|+-++...|..++.+ |.++.+++.|+++ |+...+.++|+..+ +...+.||+|++.--..+-
T Consensus 225 tG~~sl~~a~~ga~V~av---Dis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~~~~~~~~~ 301 (393)
T 4dmg_A 225 VGGFALRAARKGAYALAV---DKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVKRPEELPAM 301 (393)
T ss_dssp TTHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCCSSGGGHHHH
T ss_pred hhHHHHHHHHcCCeEEEE---ECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCCCCHHHHHHH
Confidence 677887887777654444 8888999888764 66656667786553 3323449999986321110
Q ss_pred ccChHHHHHHHhhcccCCcEEEEecC
Q 009719 210 TAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 210 ~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
......++.++.|+|||||+|++++.
T Consensus 302 ~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 302 KRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 01112488899999999999997765
|
| >2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A* | Back alignment and structure |
|---|
Probab=96.39 E-value=0.004 Score=62.97 Aligned_cols=89 Identities=11% Similarity=0.128 Sum_probs=58.0
Q ss_pred hccccccccC-CeeEEeeccCcChHHHHHHHHHcCC---------CcEEeeccccC-CCCCCCcccEEEecCcccccccC
Q 009719 144 ASFGGSMLSE-NILTLSFAPRDSHKAQIQFALERGI---------PAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAY 212 (527)
Q Consensus 144 gsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eRg~---------pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~ 212 (527)
|..+..++.. +. ..+...|.++.+++.|+++-. .+.+..+|+.. ++..+++||+|++... .++...
T Consensus 128 G~~~~~l~~~~~~--~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~~-~p~~~~ 204 (321)
T 2pt6_A 128 GGIIRELCKYKSV--ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSS-DPIGPA 204 (321)
T ss_dssp CHHHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECC-CSSSGG
T ss_pred cHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEECCc-CCCCcc
Confidence 4444445544 22 133334778899999987621 24566677644 5556789999998643 343211
Q ss_pred h----HHHHHHHhhcccCCcEEEEecC
Q 009719 213 N----ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 213 ~----~~aL~Ei~RVLRPGG~lviS~p 235 (527)
. ..++.++.|+|||||.+++...
T Consensus 205 ~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 205 ETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp GGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 1 3489999999999999999654
|
| >2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=96.36 E-value=0.00043 Score=64.42 Aligned_cols=98 Identities=10% Similarity=0.065 Sum_probs=56.1
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc----cccc-cccCCCCCCC-CCc-cchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL----IGVY-HDWCEPFSTY-PRT-YDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL----iG~~-hdwce~fstY-Prt-yDLiHa~ 442 (527)
..|||+|||.|.|+.++..... -.|+-+|.. ..+..+-+ .|+ +-++ .|..+..... +.+ ||+|-++
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 3799999999999887544432 123333433 34443333 233 1111 1222211222 367 9999887
Q ss_pred CccccccCCCCCCCCCcccccceee--cccccCCcEEEEeCCHH
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEM--DRMLRPEGTVVVRDSPE 484 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEm--DRILRP~G~~iird~~~ 484 (527)
..|. . -....++-++ -|+|+|||.+++.....
T Consensus 133 ~~~~-~---------~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 133 PPFH-F---------NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCSS-S---------CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCC-C---------ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 5543 1 1235566677 78999999999986543
|
| >2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 | Back alignment and structure |
|---|
Probab=96.35 E-value=0.00092 Score=62.27 Aligned_cols=125 Identities=19% Similarity=0.156 Sum_probs=70.3
Q ss_pred eeEeecCCCccchhhhccCC---C--eeEEEecCCCCCCchhHhhh----ccc---cccc-cccCCCCCCCC-----Ccc
Q 009719 375 RNIMDMNAFFGGFAAALTSD---P--VWVMNVVPARKSSTLSVIYD----RGL---IGVY-HDWCEPFSTYP-----RTY 436 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~--VwvMnvvp~~~~ntl~vi~e----RGL---iG~~-hdwce~fstYP-----rty 436 (527)
++|||+|||.|.++.+|... . |..+-+- +..+.++-+ .|+ +-+. .|..+.+...+ .+|
T Consensus 71 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~----~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 71 KKALDLGTFTGYSALALALALPADGRVVTCEVD----AQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESC----SHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECC----HHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 58999999999999888653 2 3333222 123333322 243 1111 11111111111 679
Q ss_pred chhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC------------HHHHHHHHH----HHhcCCcee
Q 009719 437 DLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS------------PEVIDKVSR----IANTVRWTA 500 (527)
Q Consensus 437 DLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~------------~~~~~~i~~----i~~~l~W~~ 500 (527)
|+|.++... -....++-++=|+|||||.+++.+. ......+++ +...-++++
T Consensus 147 D~v~~d~~~------------~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 214 (229)
T 2avd_A 147 DVAVVDADK------------ENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYI 214 (229)
T ss_dssp EEEEECSCS------------TTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEE
T ss_pred cEEEECCCH------------HHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEE
Confidence 999875321 2235678888899999999999642 112223333 344556776
Q ss_pred EEecCCCCCCCCceEEEEEec
Q 009719 501 AVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 501 ~~~~~e~~~~~~ekiLi~~K~ 521 (527)
..... .+.+++++|.
T Consensus 215 ~~lp~------~dGl~~~~k~ 229 (229)
T 2avd_A 215 SLLPL------GDGLTLAFKI 229 (229)
T ss_dssp EEECS------TTCEEEEEEC
T ss_pred EEEec------CCceEEEEEC
Confidence 66532 2568888884
|
| >1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A* | Back alignment and structure |
|---|
Probab=96.35 E-value=0.00066 Score=68.41 Aligned_cols=93 Identities=16% Similarity=0.209 Sum_probs=61.0
Q ss_pred CeeeEeecCCCccchhhhccCC----CeeEEEecCCCCCCchhHhhh-ccccccccccCCCCCCCCCccchhhhcCcccc
Q 009719 373 AIRNIMDMNAFFGGFAAALTSD----PVWVMNVVPARKSSTLSVIYD-RGLIGVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~----~VwvMnvvp~~~~ntl~vi~e-RGLiG~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
...+|+|+|||.|.++.+|.+. .+.++-+ |. .+..+-+ .++-=+.+|..++ .|. ||+|.+..++-.
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~----~~~~a~~~~~v~~~~~d~~~~---~p~-~D~v~~~~~lh~ 258 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQ----VVENLSGSNNLTYVGGDMFTS---IPN-ADAVLLKYILHN 258 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HH----HHTTCCCBTTEEEEECCTTTC---CCC-CSEEEEESCGGG
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HH----HHhhcccCCCcEEEeccccCC---CCC-ccEEEeehhhcc
Confidence 4579999999999999999643 2444443 31 1111111 1222233444443 454 999999999987
Q ss_pred ccCCCCCCCCCcccccceeecccccC---CcEEEEeC
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRP---EGTVVVRD 481 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP---~G~~iird 481 (527)
|.+ . ....+|-++-|+|+| ||.++|.|
T Consensus 259 ~~d-----~--~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 259 WTD-----K--DCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp SCH-----H--HHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred CCH-----H--HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 751 1 123789999999999 99999875
|
| >2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0032 Score=65.04 Aligned_cols=109 Identities=11% Similarity=0.089 Sum_probs=63.9
Q ss_pred hhccccccccCCe-eEEeeccCcChHHHHHHHHHc----CC---CcEEeeccccC-CCC---CCCcccEEEecCcc----
Q 009719 143 VASFGGSMLSENI-LTLSFAPRDSHKAQIQFALER----GI---PAFVAMLGTRR-LPF---PAFSFDIVHCSRCL---- 206 (527)
Q Consensus 143 vgsfga~Ll~r~V-~~msiAp~D~seaqvq~A~eR----g~---pa~~~v~dae~-LPF---pD~SFDlV~cs~~l---- 206 (527)
+|.++-++..++. .+..+ |.++.+++.|+++ ++ .+.+..+|+.. |+. ..++||+|++.--.
T Consensus 223 tG~~sl~la~~ga~~V~~v---D~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~ 299 (385)
T 2b78_A 223 TAAFSVAAAMGGAMATTSV---DLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARN 299 (385)
T ss_dssp TTHHHHHHHHTTBSEEEEE---ESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC---
T ss_pred cCHHHHHHHHCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCC
Confidence 6777777776554 22333 5566677766643 55 35677788654 442 25689999984211
Q ss_pred -ccccc---ChHHHHHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHh
Q 009719 207 -IPFTA---YNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARA 255 (527)
Q Consensus 207 -~hw~d---~~~~aL~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~ 255 (527)
.+..+ .-..++.++.++|+|||.++++..+.... ...-++.+.+.+..
T Consensus 300 ~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~-~~~~~~~i~~~~~~ 351 (385)
T 2b78_A 300 KKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMT-VSQFKKQIEKGFGK 351 (385)
T ss_dssp --CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC-HHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC-HHHHHHHHHHHHHH
Confidence 11111 11226778899999999999988754432 11223444444443
|
| >1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=96.28 E-value=0.00054 Score=64.30 Aligned_cols=87 Identities=18% Similarity=0.179 Sum_probs=52.0
Q ss_pred eeEeecCCCccchhhhccCC----------CeeEEEecCCCCCCchhHhhhc----c--------ccccccccCCCCCCC
Q 009719 375 RNIMDMNAFFGGFAAALTSD----------PVWVMNVVPARKSSTLSVIYDR----G--------LIGVYHDWCEPFSTY 432 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~----------~VwvMnvvp~~~~ntl~vi~eR----G--------LiG~~hdwce~fstY 432 (527)
..|||+|||.|.+++.|... .|..+-+.| ..+..+-++ | +-=+..|..+.++.
T Consensus 86 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~----~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 160 (227)
T 1r18_A 86 ARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQA----ELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP- 160 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCH----HHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG-
T ss_pred CEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCH----HHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc-
Confidence 37999999999999988652 343333222 222322221 2 11122233333321
Q ss_pred CCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 433 PRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 433 PrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
..+||+|++...+. .++-++-|+|+|||.+++.-
T Consensus 161 ~~~fD~I~~~~~~~---------------~~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 161 NAPYNAIHVGAAAP---------------DTPTELINQLASGGRLIVPV 194 (227)
T ss_dssp GCSEEEEEECSCBS---------------SCCHHHHHTEEEEEEEEEEE
T ss_pred CCCccEEEECCchH---------------HHHHHHHHHhcCCCEEEEEE
Confidence 26899999865443 24567889999999999863
|
| >2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A | Back alignment and structure |
|---|
Probab=96.26 E-value=0.002 Score=63.40 Aligned_cols=77 Identities=8% Similarity=0.020 Sum_probs=53.4
Q ss_pred ccccccCCeeEEeeccCcChHHHHHHHHHcC---------CCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHH
Q 009719 147 GGSMLSENILTLSFAPRDSHKAQIQFALERG---------IPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYL 217 (527)
Q Consensus 147 ga~Ll~r~V~~msiAp~D~seaqvq~A~eRg---------~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL 217 (527)
+..++..+ ..+...|.++.+++.|+++- ..+.+..+|+.... ++||+|++.. .+... ++
T Consensus 87 ~~~ll~~~---~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~-----~dp~~-~~ 154 (262)
T 2cmg_A 87 AHQLFKYD---THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQ-----EPDIH-RI 154 (262)
T ss_dssp HHHHTTSS---CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESS-----CCCHH-HH
T ss_pred HHHHHhCC---CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECC-----CChHH-HH
Confidence 33455553 24444577889999887642 12455667776544 8899999873 23444 89
Q ss_pred HHHhhcccCCcEEEEecC
Q 009719 218 IEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~p 235 (527)
.++.|+|||||.+++...
T Consensus 155 ~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 155 DGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp HHHHTTEEEEEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEEcC
Confidence 999999999999999653
|
| >1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A* | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0015 Score=64.38 Aligned_cols=139 Identities=14% Similarity=0.055 Sum_probs=72.4
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc-----cc-----------cccc-cccCCCCCCCCCc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR-----GL-----------IGVY-HDWCEPFSTYPRT 435 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR-----GL-----------iG~~-hdwce~fstYPrt 435 (527)
-++|||+|||.|+++..|.+.+.- +|+-++-. .-+.++-++ |+ +-+. .|-.+.... +.+
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~--~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDVD--EVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCCS--EEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCeEEEEcCCcCHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 368999999999999999776532 22222221 222222211 22 1111 111111112 578
Q ss_pred cchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-----CHHHHHHHHHHHhcCCceeEEec--CCCC
Q 009719 436 YDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-----SPEVIDKVSRIANTVRWTAAVHD--KEPG 508 (527)
Q Consensus 436 yDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-----~~~~~~~i~~i~~~l~W~~~~~~--~e~~ 508 (527)
||+|-++.. ..+. ....--...++-++-|+|+|||.+++.. ..+.+..+.+..+..--.+.... ...+
T Consensus 153 fD~Ii~d~~-~~~~----~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~ 227 (281)
T 1mjf_A 153 FDVIIADST-DPVG----PAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSFPVIGY 227 (281)
T ss_dssp EEEEEEECC-CCC---------TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEECCTTS
T ss_pred eeEEEECCC-CCCC----cchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEEecCCC
Confidence 999998643 2221 0000011456788999999999999972 33444444444443323333221 1222
Q ss_pred CCCCceEEEEEec
Q 009719 509 SNGREKILVATKS 521 (527)
Q Consensus 509 ~~~~ekiLi~~K~ 521 (527)
.+...+++|.|+
T Consensus 228 -~g~~~~~~as~~ 239 (281)
T 1mjf_A 228 -ASPWAFLVGVKG 239 (281)
T ss_dssp -SSSEEEEEEEES
T ss_pred -CceEEEEEeeCC
Confidence 345678888886
|
| >3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.00076 Score=64.55 Aligned_cols=127 Identities=12% Similarity=0.150 Sum_probs=70.3
Q ss_pred eeeEeecCCCccchhhhccC-----CCeeEEEecCCCCCCchhHh----hhccccc---cc-cccCCCCCCC------CC
Q 009719 374 IRNIMDMNAFFGGFAAALTS-----DPVWVMNVVPARKSSTLSVI----YDRGLIG---VY-HDWCEPFSTY------PR 434 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~-----~~VwvMnvvp~~~~ntl~vi----~eRGLiG---~~-hdwce~fstY------Pr 434 (527)
-++|||+|||.|..+.+|.. ..|..+-+-| ..+.++ -+.|+-. +. .|..+.++.. +.
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~----~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDR----EAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEG 146 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCH----HHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTT
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCH----HHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCC
Confidence 46899999999998877743 2233332211 222222 2235411 11 1222222222 46
Q ss_pred ccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC--------H---------HHHHHHHHH----H
Q 009719 435 TYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS--------P---------EVIDKVSRI----A 493 (527)
Q Consensus 435 tyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~--------~---------~~~~~i~~i----~ 493 (527)
+||+|-++.--. ....++-++-|+|||||.+++.+- . .....|+++ .
T Consensus 147 ~fD~I~~d~~~~------------~~~~~l~~~~~~L~pGG~lv~d~~~~~g~~~~~~~~~~~~~r~~~~~i~~~~~~l~ 214 (237)
T 3c3y_A 147 SYDFGFVDADKP------------NYIKYHERLMKLVKVGGIVAYDNTLWGGTVAQPESEVPDFMKENREAVIELNKLLA 214 (237)
T ss_dssp CEEEEEECSCGG------------GHHHHHHHHHHHEEEEEEEEEECTTGGGGGGSCGGGSCGGGHHHHHHHHHHHHHHH
T ss_pred CcCEEEECCchH------------HHHHHHHHHHHhcCCCeEEEEecCCcCCccCCCcccchhhHHHHHHHHHHHHHHHh
Confidence 899997753222 235577778899999999999751 0 012333333 4
Q ss_pred hcCCceeEEecCCCCCCCCceEEEEEecc
Q 009719 494 NTVRWTAAVHDKEPGSNGREKILVATKSL 522 (527)
Q Consensus 494 ~~l~W~~~~~~~e~~~~~~ekiLi~~K~~ 522 (527)
..=+......-. .+.+++++|++
T Consensus 215 ~~~~~~~~~lp~------~dG~~~~~~~~ 237 (237)
T 3c3y_A 215 ADPRIEIVHLPL------GDGITFCRRLY 237 (237)
T ss_dssp HCTTEEEEEECS------TTCEEEEEECC
T ss_pred cCCCeEEEEEEe------CCceEEEEEcC
Confidence 444566555422 35689999863
|
| >2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.00074 Score=62.98 Aligned_cols=90 Identities=12% Similarity=0.178 Sum_probs=51.3
Q ss_pred eeEeecCCCccchhhhccCC------C-eeEEEecCCCCCCchhHhhhc----cc-------cc-cccccCCCCC---CC
Q 009719 375 RNIMDMNAFFGGFAAALTSD------P-VWVMNVVPARKSSTLSVIYDR----GL-------IG-VYHDWCEPFS---TY 432 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~------~-VwvMnvvp~~~~ntl~vi~eR----GL-------iG-~~hdwce~fs---tY 432 (527)
.+|||+|||.|.+++.|... | .-|..|-.. +..+..+-++ |+ +- +..|..+.+. .-
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERV--KDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESC--HHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCC--HHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 48999999999999888542 1 222222211 1223333222 31 11 1122222110 11
Q ss_pred CCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 433 PRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 433 PrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
..+||+|++...+. .++-++-++|+|||.+++.-
T Consensus 160 ~~~fD~I~~~~~~~---------------~~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 160 LGLFDAIHVGASAS---------------ELPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp HCCEEEEEECSBBS---------------SCCHHHHHHEEEEEEEEEEE
T ss_pred CCCcCEEEECCchH---------------HHHHHHHHhcCCCcEEEEEE
Confidence 26799998864443 35677889999999999874
|
| >1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A* | Back alignment and structure |
|---|
Probab=96.21 E-value=0.0026 Score=63.04 Aligned_cols=154 Identities=12% Similarity=0.157 Sum_probs=86.2
Q ss_pred hhhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc---cc
Q 009719 349 ADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL---IG 420 (527)
Q Consensus 349 ~d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL---iG 420 (527)
.+++.+.+.+-.+... . . -.+|+|+|||.|.++.+|...|-+ +|+-+|-. ..+.++-+ .|+ +-
T Consensus 106 ~~te~lv~~~l~~~~~-~----~--~~~vLDlG~GsG~~~~~la~~~~~--~v~~vDis~~al~~A~~n~~~~~l~~~v~ 176 (284)
T 1nv8_A 106 PETEELVELALELIRK-Y----G--IKTVADIGTGSGAIGVSVAKFSDA--IVFATDVSSKAVEIARKNAERHGVSDRFF 176 (284)
T ss_dssp TTHHHHHHHHHHHHHH-H----T--CCEEEEESCTTSHHHHHHHHHSSC--EEEEEESCHHHHHHHHHHHHHTTCTTSEE
T ss_pred hhHHHHHHHHHHHhcc-c----C--CCEEEEEeCchhHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCceE
Confidence 4566666665544431 1 1 237999999999999988655322 22223322 34444333 244 22
Q ss_pred -cccccCCCCCCCCCcc---chhhhcCccccccC---CCC--C-----CCCCcccccceeec-ccccCCcEEEEeCCHHH
Q 009719 421 -VYHDWCEPFSTYPRTY---DLIHVSGIESLIKN---PGS--N-----KNSCSLVDLMVEMD-RMLRPEGTVVVRDSPEV 485 (527)
Q Consensus 421 -~~hdwce~fstYPrty---DLiHa~~~fs~~~~---~~~--~-----~~rC~~~~illEmD-RILRP~G~~iird~~~~ 485 (527)
+..||.+.+ +.+| |+|-++--+....+ +.. + ...++-..++-++= +.|+|||++++.-..+.
T Consensus 177 ~~~~D~~~~~---~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q 253 (284)
T 1nv8_A 177 VRKGEFLEPF---KEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQ 253 (284)
T ss_dssp EEESSTTGGG---GGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTC
T ss_pred EEECcchhhc---ccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchH
Confidence 234565544 3578 99988633322110 000 0 00112225677788 99999999999765555
Q ss_pred HHHHHHHHhcCCceeEEecCCCCCCCCceEEEEEec
Q 009719 486 IDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 486 ~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
-+.+.++++.. ....|. .+.+++++++++
T Consensus 254 ~~~v~~~~~~~---~~~~D~----~g~~R~~~~~~k 282 (284)
T 1nv8_A 254 VEELKKIVSDT---VFLKDS----AGKYRFLLLNRR 282 (284)
T ss_dssp HHHHTTTSTTC---EEEECT----TSSEEEEEEECC
T ss_pred HHHHHHHHHhC---Ceeccc----CCCceEEEEEEc
Confidence 56677776654 222232 246788888875
|
| >1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A* | Back alignment and structure |
|---|
Probab=96.20 E-value=0.0022 Score=63.86 Aligned_cols=143 Identities=10% Similarity=0.062 Sum_probs=72.6
Q ss_pred eeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhc------cc----cccc-cccCCCCCCCCCccchhh
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDR------GL----IGVY-HDWCEPFSTYPRTYDLIH 440 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eR------GL----iG~~-hdwce~fstYPrtyDLiH 440 (527)
-++|||+|||.|+++.++.+. ++.- |+-++-. .-+.++-++ |+ +-+. .|..+.....+.+||+|-
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~~--v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVEK--AILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCSE--EEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCCE--EEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 378999999999999999876 4322 2222221 222222221 11 1111 121111222357899998
Q ss_pred hcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-----CHHHHHHHHHHHhcCCceeEEec--CCCCCCCCc
Q 009719 441 VSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-----SPEVIDKVSRIANTVRWTAAVHD--KEPGSNGRE 513 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-----~~~~~~~i~~i~~~l~W~~~~~~--~e~~~~~~e 513 (527)
++. +..+..+ ...-....++-++-|+|+|||.+++.. ..+.+..+.+.+++.--.+.... ....+.+..
T Consensus 169 ~d~-~~~~~~~---~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~ 244 (296)
T 1inl_A 169 IDS-TDPTAGQ---GGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMW 244 (296)
T ss_dssp EEC--------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEE
T ss_pred EcC-CCcccCc---hhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCce
Confidence 752 2221100 000011467788999999999999973 22333333333333322333321 222334556
Q ss_pred eEEEEEecc
Q 009719 514 KILVATKSL 522 (527)
Q Consensus 514 kiLi~~K~~ 522 (527)
.+++|.|++
T Consensus 245 ~f~~as~~~ 253 (296)
T 1inl_A 245 SYTFASKGI 253 (296)
T ss_dssp EEEEEESSC
T ss_pred EEEEecCCC
Confidence 788999874
|
| >2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.00083 Score=67.85 Aligned_cols=111 Identities=14% Similarity=0.104 Sum_probs=63.1
Q ss_pred eeEeecCCCccchhhhccCC----CeeEEEecCCCCCCchhHhhh----ccccccccccCCCCCCCCCccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSD----PVWVMNVVPARKSSTLSVIYD----RGLIGVYHDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~----~VwvMnvvp~~~~ntl~vi~e----RGLiG~~hdwce~fstYPrtyDLiHa~~~fs 446 (527)
.+|+|+|||.|.++.+|... .|..+-+-+ .-+..+-+ .|+-..++ +...++.-+.+||+|-++..|.
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~----~~l~~a~~~~~~~~~~~~~~-~~d~~~~~~~~fD~Iv~~~~~~ 272 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSA----PAVEASRATLAANGVEGEVF-ASNVFSEVKGRFDMIISNPPFH 272 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBH----HHHHHHHHHHHHTTCCCEEE-ECSTTTTCCSCEEEEEECCCCC
T ss_pred CeEEEecCccCHHHHHHHHHCCCCEEEEEECCH----HHHHHHHHHHHHhCCCCEEE-EccccccccCCeeEEEECCCcc
Confidence 37999999999999888543 233322211 22222222 23321111 2223332358999999987775
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeCC--HHHHHHHHHHHh
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS--PEVIDKVSRIAN 494 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~--~~~~~~i~~i~~ 494 (527)
... ..+.-....++-|+-|+|+|||.+++-.. ...-..++++..
T Consensus 273 ~g~----~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l~~~f~ 318 (343)
T 2pjd_A 273 DGM----QTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFG 318 (343)
T ss_dssp SSS----HHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHHHHHHS
T ss_pred cCc----cCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHHHHhcC
Confidence 210 00011246789999999999999998743 223334444444
|
| >4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.00061 Score=70.44 Aligned_cols=112 Identities=11% Similarity=0.083 Sum_probs=62.3
Q ss_pred eeEeecCCCccchhhhccCC--C--eeEEEecCCCCCCchhH----hhhccccc---cccccCCCCCCCC-Cccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSD--P--VWVMNVVPARKSSTLSV----IYDRGLIG---VYHDWCEPFSTYP-RTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~--VwvMnvvp~~~~ntl~v----i~eRGLiG---~~hdwce~fstYP-rtyDLiHa~ 442 (527)
.+|||+|||.|.|+.+|... . |.-+-+-+ ..+.. +-..|+-. +--.+...+..+| .+||+|-++
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~----~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~n 299 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESP----MAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCN 299 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESCH----HHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEEEEEEC
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECcH----HHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCeeEEEEC
Confidence 68999999999999888654 2 33332221 22222 22233311 1001122233334 689999998
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC--CHHHHHHHHHHHh
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD--SPEVIDKVSRIAN 494 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird--~~~~~~~i~~i~~ 494 (527)
-.|.... ...+-....++-++-|+|+|||.+++-. ...+-..++++..
T Consensus 300 ppfh~~~----~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l~~~fg 349 (375)
T 4dcm_A 300 PPFHQQH----ALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG 349 (375)
T ss_dssp CCC-----------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS
T ss_pred CCcccCc----ccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHHHHhcC
Confidence 7775321 0011122357889999999999999964 3334455555544
|
| >1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A* | Back alignment and structure |
|---|
Probab=96.14 E-value=0.0016 Score=64.27 Aligned_cols=88 Identities=11% Similarity=0.064 Sum_probs=56.0
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcC-----C----------CcEEeeccccC-CCCCCCcccEEEecCccc
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERG-----I----------PAFVAMLGTRR-LPFPAFSFDIVHCSRCLI 207 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg-----~----------pa~~~v~dae~-LPFpD~SFDlV~cs~~l~ 207 (527)
|.++..++.++.. .+...|.++.+++.|+++- + .+.+..+|+.. |+. +++||+|++....
T Consensus 87 G~~~~~l~~~~~~--~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~fD~Ii~d~~~- 162 (281)
T 1mjf_A 87 GGTVREVLQHDVD--EVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGFDVIIADSTD- 162 (281)
T ss_dssp SHHHHHHTTSCCS--EEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCEEEEEEECCC-
T ss_pred CHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCCeeEEEECCCC-
Confidence 3444455555321 3334477788999988753 1 24556667543 444 7899999987542
Q ss_pred ccccC----hHHHHHHHhhcccCCcEEEEecC
Q 009719 208 PFTAY----NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 208 hw~d~----~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|+... ...++.++.|+|||||.+++...
T Consensus 163 ~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 163 PVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp CC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 43221 13489999999999999999653
|
| >2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=96.13 E-value=0.00033 Score=62.70 Aligned_cols=96 Identities=19% Similarity=0.209 Sum_probs=53.9
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhh----hccc---cccc-cccCCCCCCC---CCccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIY----DRGL---IGVY-HDWCEPFSTY---PRTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~----eRGL---iG~~-hdwce~fstY---PrtyDLiHa~ 442 (527)
.+|||+|||.|.++.++...+.. +|+-+|.. ..+..+- ..|+ +-++ .|+.+..... +.+||+|-++
T Consensus 46 ~~vLD~GcG~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~ 123 (187)
T 2fhp_A 46 GMALDLYSGSGGLAIEAVSRGMD--KSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLD 123 (187)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCEEEeCCccCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEEC
Confidence 48999999999998877555421 12222222 2222222 2233 1111 2333321111 4689999887
Q ss_pred CccccccCCCCCCCCCcccccceee--cccccCCcEEEEeCC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEM--DRMLRPEGTVVVRDS 482 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEm--DRILRP~G~~iird~ 482 (527)
..|..- ....++-++ -|+|+|||.+++...
T Consensus 124 ~~~~~~----------~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 124 PPYAKQ----------EIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp CCGGGC----------CHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCCCch----------hHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 665411 123445455 899999999999743
|
| >1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=96.13 E-value=0.0026 Score=61.61 Aligned_cols=105 Identities=13% Similarity=0.132 Sum_probs=66.2
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCC-CchhHhhhc----cc---c-ccccccCCCCCCCC-Cccchhhh
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKS-STLSVIYDR----GL---I-GVYHDWCEPFSTYP-RTYDLIHV 441 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~-ntl~vi~eR----GL---i-G~~hdwce~fstYP-rtyDLiHa 441 (527)
.+|||+|||.|.++.+|.+. ..- |+-.+.. ..+..+-++ |+ + -...|..+. +| .+||+|-+
T Consensus 114 ~~VLDiG~G~G~~~~~la~~~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~D~V~~ 187 (277)
T 1o54_A 114 DRIIDTGVGSGAMCAVLARAVGSSGK---VFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG---FDEKDVDALFL 187 (277)
T ss_dssp CEEEEECCTTSHHHHHHHHHTTTTCE---EEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC---CSCCSEEEEEE
T ss_pred CEEEEECCcCCHHHHHHHHHhCCCcE---EEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc---ccCCccCEEEE
Confidence 37999999999999888544 232 3333332 445554443 43 1 123344443 34 67999876
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-HHHHHHHHHHHhcCCce
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-PEVIDKVSRIANTVRWT 499 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-~~~~~~i~~i~~~l~W~ 499 (527)
+- . ....+|-++-|+|+|||.+++... .+.+.++.+.++...|.
T Consensus 188 ~~-----~---------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~ 232 (277)
T 1o54_A 188 DV-----P---------DPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFI 232 (277)
T ss_dssp CC-----S---------CGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEE
T ss_pred CC-----c---------CHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 31 0 124688889999999999999865 44566666666666665
|
| >1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A* | Back alignment and structure |
|---|
Probab=96.12 E-value=0.0016 Score=62.96 Aligned_cols=92 Identities=13% Similarity=0.204 Sum_probs=52.8
Q ss_pred eeeEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHh----hhccc---cccc-cccCCCCCCC------CC
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVI----YDRGL---IGVY-HDWCEPFSTY------PR 434 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi----~eRGL---iG~~-hdwce~fstY------Pr 434 (527)
-++|||+|||.|.++..|... .|..+-+-| ..+.++ -+.|+ |-+. .|..+..+.. +.
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~----~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~ 155 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINK----ENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHG 155 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCC----HHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTT
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCH----HHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCC
Confidence 368999999999998877432 233332221 222222 22344 1111 1222211222 47
Q ss_pred ccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 435 TYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 435 tyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+||+|-++.... ....++-++-|+|||||.+++.+
T Consensus 156 ~fD~V~~d~~~~------------~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 156 SYDFIFVDADKD------------NYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp CBSEEEECSCST------------THHHHHHHHHHHBCTTCCEEEEC
T ss_pred CEEEEEEcCchH------------HHHHHHHHHHHhCCCCeEEEEec
Confidence 899997653211 23567778889999999999975
|
| >2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=96.10 E-value=0.00085 Score=61.90 Aligned_cols=88 Identities=15% Similarity=0.117 Sum_probs=53.0
Q ss_pred eeEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhhhc----cc--cc-cccccCCCCCCCCCccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIYDR----GL--IG-VYHDWCEPFSTYPRTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~eR----GL--iG-~~hdwce~fstYPrtyDLiHa~ 442 (527)
.+|||+|||.|.+++.|... .|..+-+- ++.+..+-++ |+ +- ...|..+.+. -+.+||+|.+.
T Consensus 79 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~----~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~ 153 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERI----PELAEKAERTLRKLGYDNVIVIVGDGTLGYE-PLAPYDRIYTT 153 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEEESC----HHHHHHHHHHHHHHTCTTEEEEESCGGGCCG-GGCCEEEEEES
T ss_pred CEEEEECCCccHHHHHHHHHhCCCCEEEEEeCC----HHHHHHHHHHHHHcCCCCeEEEECCcccCCC-CCCCeeEEEEC
Confidence 48999999999999888543 23333221 1334444333 32 11 1122222222 13689999988
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
..+... .-++-|+|+|||.+++.-.
T Consensus 154 ~~~~~~---------------~~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 154 AAGPKI---------------PEPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp SBBSSC---------------CHHHHHTEEEEEEEEEEES
T ss_pred CchHHH---------------HHHHHHHcCCCcEEEEEEC
Confidence 666533 2378899999999998743
|
| >2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=96.08 E-value=0.0022 Score=64.17 Aligned_cols=91 Identities=11% Similarity=0.089 Sum_probs=49.5
Q ss_pred eeEeecCCCccchhhhccCC--C-eeEEEecCCCCCCchhHhhhc----c----------c---cc-cccccCCCCCCCC
Q 009719 375 RNIMDMNAFFGGFAAALTSD--P-VWVMNVVPARKSSTLSVIYDR----G----------L---IG-VYHDWCEPFSTYP 433 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~-VwvMnvvp~~~~ntl~vi~eR----G----------L---iG-~~hdwce~fstYP 433 (527)
.+|||+|||.|.++.+|... + .-|..+=.. +..+..+-++ | + +- ...|..+....++
T Consensus 107 ~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~ 184 (336)
T 2b25_A 107 DTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVR--KDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIK 184 (336)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESS--HHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC----
T ss_pred CEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCC--HHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccC
Confidence 48999999999999888543 2 223222111 1222322221 1 1 11 1223333222234
Q ss_pred -CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 434 -RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 434 -rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.+||+|.++. ... ..++-++-|+|+|||.+++..
T Consensus 185 ~~~fD~V~~~~-~~~-------------~~~l~~~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 185 SLTFDAVALDM-LNP-------------HVTLPVFYPHLKHGGVCAVYV 219 (336)
T ss_dssp ---EEEEEECS-SST-------------TTTHHHHGGGEEEEEEEEEEE
T ss_pred CCCeeEEEECC-CCH-------------HHHHHHHHHhcCCCcEEEEEe
Confidence 5799998742 111 237788999999999999865
|
| >3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A* | Back alignment and structure |
|---|
Probab=96.07 E-value=0.0011 Score=68.86 Aligned_cols=111 Identities=15% Similarity=0.146 Sum_probs=65.0
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc-cccc-cccCCCCCCCC-CccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL-IGVY-HDWCEPFSTYP-RTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL-iG~~-hdwce~fstYP-rtyDLiHa~~~fs 446 (527)
.+|+|+|||.|.++.+|.+... .|+-+|.. ..+..+-+ .|+ +-++ .|..+ +. .+ .+||+|-++-.|.
T Consensus 235 ~~VLDlGcG~G~~~~~la~~g~---~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~-~~-~~~~~fD~Ii~npp~~ 309 (381)
T 3dmg_A 235 RQVLDLGAGYGALTLPLARMGA---EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDE-AL-TEEARFDIIVTNPPFH 309 (381)
T ss_dssp CEEEEETCTTSTTHHHHHHTTC---EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTT-TS-CTTCCEEEEEECCCCC
T ss_pred CEEEEEeeeCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhh-cc-ccCCCeEEEEECCchh
Confidence 4899999999999999977654 33333322 33332222 232 2222 22222 11 23 6999999987776
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeCCH--HHHHHHHHHHh
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP--EVIDKVSRIAN 494 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~--~~~~~i~~i~~ 494 (527)
... ....-....++-++-|+|+|||.++|.... .+-..+++...
T Consensus 310 ~~~----~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l~~~f~ 355 (381)
T 3dmg_A 310 VGG----AVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFG 355 (381)
T ss_dssp TTC----SSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHHHHHS
T ss_pred hcc----cccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHHHHhhc
Confidence 321 001112356888999999999999997432 23344555443
|
| >2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 | Back alignment and structure |
|---|
Probab=96.07 E-value=0.0021 Score=59.88 Aligned_cols=68 Identities=16% Similarity=0.150 Sum_probs=45.8
Q ss_pred cChHHHHHHHHHc----CC--CcEEeeccccCC-C-CCC----CcccEEEecCcccccccChHHHHHHHhhcccCCcEEE
Q 009719 164 DSHKAQIQFALER----GI--PAFVAMLGTRRL-P-FPA----FSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLV 231 (527)
Q Consensus 164 D~seaqvq~A~eR----g~--pa~~~v~dae~L-P-FpD----~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lv 231 (527)
|.++.+++.|+++ |. .+.+..+|+... + +++ ++||+|++.... .....++.++.|+|||||.++
T Consensus 101 D~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~~d~~~----~~~~~~l~~~~~~L~pgG~lv 176 (229)
T 2avd_A 101 EVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDADK----ENCSAYYERCLQLLRPGGILA 176 (229)
T ss_dssp ESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEEEECSCS----TTHHHHHHHHHHHEEEEEEEE
T ss_pred ECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEEEECCCH----HHHHHHHHHHHHHcCCCeEEE
Confidence 5566777777654 54 355666665332 2 222 789999986542 222348999999999999999
Q ss_pred EecC
Q 009719 232 ISGP 235 (527)
Q Consensus 232 iS~p 235 (527)
+...
T Consensus 177 ~~~~ 180 (229)
T 2avd_A 177 VLRV 180 (229)
T ss_dssp EECC
T ss_pred EECC
Confidence 9653
|
| >3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=96.06 E-value=0.0008 Score=62.34 Aligned_cols=121 Identities=15% Similarity=0.117 Sum_probs=63.3
Q ss_pred eeEeecCCCccchhhhccCC--CeeEEEecCCCCCCchhHh--------hhcccc--ccccccCCCCCCCCCccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKSSTLSVI--------YDRGLI--GVYHDWCEPFSTYPRTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~ntl~vi--------~eRGLi--G~~hdwce~fstYPrtyDLiHa~ 442 (527)
..|||+|||.|.++.+|... ..-|.-|=.. +..|..+ -.+|+- -..+.=.+.++....+ |.+...
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s--~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~ 105 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQNPSRLVVALDAD--KSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVL 105 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHCTTEEEEEEESC--GGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEE
T ss_pred CEEEEecCCCCHHHHHHHHHCCCCEEEEEECC--HHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEE
Confidence 57999999999999998665 3333333221 1333321 134432 1111111223322244 666521
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC------------------CHHH-HHHHHHHHhcCCceeEE
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD------------------SPEV-IDKVSRIANTVRWTAAV 502 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird------------------~~~~-~~~i~~i~~~l~W~~~~ 502 (527)
-.+.... ..+-=+...+|-|+-|+|||||.+++.. ..+. .+.++.++..--|++..
T Consensus 106 ~~~~~~~----~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~ 180 (218)
T 3mq2_A 106 MPWGSLL----RGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLAD 180 (218)
T ss_dssp SCCHHHH----HHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEE
T ss_pred ccchhhh----hhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCcee
Confidence 1111000 0000011678899999999999999952 1222 33477777777887654
|
| >2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A* | Back alignment and structure |
|---|
Probab=96.06 E-value=0.0079 Score=60.52 Aligned_cols=54 Identities=13% Similarity=0.023 Sum_probs=40.3
Q ss_pred cEE-eeccccCCCCCCCcccEEEecCcccccc-----cC------hHHHHHHHhhcccCCcEEEEecC
Q 009719 180 AFV-AMLGTRRLPFPAFSFDIVHCSRCLIPFT-----AY------NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 180 a~~-~v~dae~LPFpD~SFDlV~cs~~l~hw~-----d~------~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.+ .++|...++++ ++||+|+|... .++. +. -..+|.|+.|+|||||.|++...
T Consensus 107 v~~~i~gD~~~~~~~-~~fD~Vvsn~~-~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 107 ADSTLIGDCATVHTA-NKWDLIISDMY-DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp SSEEEESCGGGCCCS-SCEEEEEECCC-CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CEEEEECccccCCcc-CcccEEEEcCC-ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 456 78899888886 78999998643 2221 11 12489999999999999999765
|
| >4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=96.05 E-value=0.0029 Score=61.95 Aligned_cols=100 Identities=14% Similarity=0.126 Sum_probs=59.9
Q ss_pred cCCCCeeeEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhhhcc-ccccccccCCCCC--CCCCccchhh
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIYDRG-LIGVYHDWCEPFS--TYPRTYDLIH 440 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~eRG-LiG~~hdwce~fs--tYPrtyDLiH 440 (527)
|+.|. .|||.|||.|.|+..|.+. .|....+-|.-...-...+-+++ +.-+..|-+.+-. .-+.++|+|.
T Consensus 75 ikpG~--~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf 152 (233)
T 4df3_A 75 VKEGD--RILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLY 152 (233)
T ss_dssp CCTTC--EEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEE
T ss_pred CCCCC--EEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEE
Confidence 56664 7999999999999998542 36665554431111122333444 3344444443311 1236788876
Q ss_pred hcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 441 VSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
++-.+. + ....++.|+-|+|+|||.++|..
T Consensus 153 ~d~~~~-~----------~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 153 ADVAQP-E----------QAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp ECCCCT-T----------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeccCC-h----------hHHHHHHHHHHhccCCCEEEEEE
Confidence 542111 1 23567889999999999999863
|
| >2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.0016 Score=68.28 Aligned_cols=47 Identities=19% Similarity=0.209 Sum_probs=36.4
Q ss_pred cCCCCCCCcccEEEecCcccccccChHHH---------------------------------------HHHHhhcccCCc
Q 009719 188 RRLPFPAFSFDIVHCSRCLIPFTAYNATY---------------------------------------LIEVDRLLRPGG 228 (527)
Q Consensus 188 e~LPFpD~SFDlV~cs~~l~hw~d~~~~a---------------------------------------L~Ei~RVLRPGG 228 (527)
..-.||++|||+|+++.+| ||..+.... |+-..|+|+|||
T Consensus 141 y~rlfp~~S~d~v~Ss~aL-HWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG 219 (384)
T 2efj_A 141 YSRLFPEESMHFLHSCYCL-HWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRG 219 (384)
T ss_dssp TSCCSCTTCEEEEEEESCT-TBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred hhccCCCCceEEEEeccee-eecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 4578999999999999997 885432111 444489999999
Q ss_pred EEEEecC
Q 009719 229 YLVISGP 235 (527)
Q Consensus 229 ~lviS~p 235 (527)
+++++..
T Consensus 220 ~mvl~~~ 226 (384)
T 2efj_A 220 RMLLTFI 226 (384)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 9999875
|
| >1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=96.01 E-value=0.0057 Score=60.28 Aligned_cols=144 Identities=15% Similarity=0.156 Sum_probs=75.9
Q ss_pred CeeeEeecCCCccchhhhccCC-CeeEEEecCCCCCCchhHhhhc------cc----ccccc-ccCCCCCCCCCccchhh
Q 009719 373 AIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKSSTLSVIYDR------GL----IGVYH-DWCEPFSTYPRTYDLIH 440 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~ntl~vi~eR------GL----iG~~h-dwce~fstYPrtyDLiH 440 (527)
.-++|||+|||.|+++..+.+. ++--+-+|=.+ +.-+.++-+. |+ +-+.+ |-.+.....+.+||+|-
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid-~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDID-GKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESC-HHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECC-HHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 4579999999999999998876 44222222111 1222222111 11 11111 11111122357899999
Q ss_pred hcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-----CHHHHHHHHHHHhcCCceeEEec--CCCCCCCCc
Q 009719 441 VSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-----SPEVIDKVSRIANTVRWTAAVHD--KEPGSNGRE 513 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-----~~~~~~~i~~i~~~l~W~~~~~~--~e~~~~~~e 513 (527)
++.. ..+. ....--...++-++-|+|+|||.+++.. ..+.+..+.+.+++.=-.+.... ....+.+..
T Consensus 154 ~d~~-~~~~----~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w 228 (275)
T 1iy9_A 154 VDST-EPVG----PAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLW 228 (275)
T ss_dssp ESCS-SCCS----CCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCE
T ss_pred ECCC-CCCC----cchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcce
Confidence 8633 2221 0111112467788999999999999973 23444555444444433333321 222223445
Q ss_pred eEEEEEecc
Q 009719 514 KILVATKSL 522 (527)
Q Consensus 514 kiLi~~K~~ 522 (527)
.+++|.|++
T Consensus 229 ~~~~ask~~ 237 (275)
T 1iy9_A 229 TFTIGSKKY 237 (275)
T ss_dssp EEEEEESSC
T ss_pred EEEEeeCCC
Confidence 788888864
|
| >1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24 | Back alignment and structure |
|---|
Probab=95.94 E-value=0.0029 Score=62.57 Aligned_cols=83 Identities=13% Similarity=0.107 Sum_probs=54.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC----C--CcEEeeccccCCCCCCCcccEEEecCcccccccChHH-
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG----I--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNAT- 215 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg----~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~- 215 (527)
.|.++..|+.++..+..+ |.++.+++.|+++. . ...+..+|+..++++ +||+|+++... ||..+.-.
T Consensus 39 ~G~lt~~L~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~fD~vv~nlpy-~~~~~~~~~ 112 (285)
T 1zq9_A 39 TGNMTVKLLEKAKKVVAC---ELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--FFDTCVANLPY-QISSPFVFK 112 (285)
T ss_dssp TSTTHHHHHHHSSEEEEE---ESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--CCSEEEEECCG-GGHHHHHHH
T ss_pred ccHHHHHHHhhCCEEEEE---ECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--hhcEEEEecCc-ccchHHHHH
Confidence 455666666665433333 67788998888752 2 356778899888887 79999997542 44322111
Q ss_pred HH--------------HHHh--hcccCCcEEE
Q 009719 216 YL--------------IEVD--RLLRPGGYLV 231 (527)
Q Consensus 216 aL--------------~Ei~--RVLRPGG~lv 231 (527)
.| +|+. |+|||||.++
T Consensus 113 ~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 113 LLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp HHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred HHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 11 4553 7999999874
|
| >2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A* | Back alignment and structure |
|---|
Probab=95.93 E-value=0.0056 Score=61.56 Aligned_cols=90 Identities=9% Similarity=-0.066 Sum_probs=52.2
Q ss_pred hhccccccccC-CeeEEeeccCcChHHHHHHHH-H-cCCC-cEEeec-cccCCCCCCCcccEEEecCccc--cc-ccChH
Q 009719 143 VASFGGSMLSE-NILTLSFAPRDSHKAQIQFAL-E-RGIP-AFVAML-GTRRLPFPAFSFDIVHCSRCLI--PF-TAYNA 214 (527)
Q Consensus 143 vgsfga~Ll~r-~V~~msiAp~D~seaqvq~A~-e-Rg~p-a~~~v~-dae~LPFpD~SFDlV~cs~~l~--hw-~d~~~ 214 (527)
.|.|+.+|..+ .|+++++.... +..+++.+. + .+.+ +.+.++ |+..+| +++||+|+|..+.+ |+ .+...
T Consensus 93 ~G~~s~~la~~~~V~gvD~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd~~~~~g~~~~d~~~ 169 (305)
T 2p41_A 93 RGGWSYYCGGLKNVREVKGLTKG-GPGHEEPIPMSTYGWNLVRLQSGVDVFFIP--PERCDTLLCDIGESSPNPTVEAGR 169 (305)
T ss_dssp TSHHHHHHHTSTTEEEEEEECCC-STTSCCCCCCCSTTGGGEEEECSCCTTTSC--CCCCSEEEECCCCCCSSHHHHHHH
T ss_pred CCHHHHHHHhcCCEEEEeccccC-chhHHHHHHhhhcCCCCeEEEeccccccCC--cCCCCEEEECCccccCcchhhHHH
Confidence 56676677665 36666661110 011111111 1 1223 345556 666554 67999999976542 22 22221
Q ss_pred --HHHHHHhhcccCCcEEEEecC
Q 009719 215 --TYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 215 --~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+|.++.|+|||||.|++...
T Consensus 170 ~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 170 TLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEES
T ss_pred HHHHHHHHHHHhCCCCEEEEEeC
Confidence 389999999999999999654
|
| >2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51 | Back alignment and structure |
|---|
Probab=95.92 E-value=0.0019 Score=66.49 Aligned_cols=94 Identities=16% Similarity=0.007 Sum_probs=60.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCC-C---CCCcccEEEecCcccc----
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLP-F---PAFSFDIVHCSRCLIP---- 208 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LP-F---pD~SFDlV~cs~~l~h---- 208 (527)
+|.|+-++...+.. .+...|.++.+++.|+++ ++ .+.+..+|+..+. . .+++||+|++.--..+
T Consensus 228 ~G~~~~~la~~g~~--~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~~~~ 305 (396)
T 2as0_A 228 TGGFAIHAAIAGAD--EVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQHEK 305 (396)
T ss_dssp TTHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCSSGG
T ss_pred CCHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEECCCCCCCCHH
Confidence 67777777766531 222336777888877654 55 3567778875542 2 3689999998532111
Q ss_pred ----cccChHHHHHHHhhcccCCcEEEEecCCCC
Q 009719 209 ----FTAYNATYLIEVDRLLRPGGYLVISGPPVQ 238 (527)
Q Consensus 209 ----w~d~~~~aL~Ei~RVLRPGG~lviS~pp~~ 238 (527)
.......++.++.++|||||++++++....
T Consensus 306 ~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 306 DLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp GHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 111223488999999999999999886443
|
| >2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A | Back alignment and structure |
|---|
Probab=95.90 E-value=0.002 Score=57.84 Aligned_cols=84 Identities=14% Similarity=0.250 Sum_probs=53.5
Q ss_pred CCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHH----------HHHHHHHHHhcCCceeEE
Q 009719 433 PRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPE----------VIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 433 PrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~----------~~~~i~~i~~~l~W~~~~ 502 (527)
+.+||+|.+..++.... -+...+|-|+-|+|||||++++.+... ..+++.+.++.--+ +.+
T Consensus 61 ~~~fD~V~~~~~l~~~~--------~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~~ 131 (176)
T 2ld4_A 61 ESSFDIILSGLVPGSTT--------LHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VEV 131 (176)
T ss_dssp SSCEEEEEECCSTTCCC--------CCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EEE
T ss_pred CCCEeEEEECChhhhcc--------cCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cEe
Confidence 47999999987776441 134789999999999999999964211 14566666554444 333
Q ss_pred ecCCCCCCC------------------CceEEEEEeccCCC
Q 009719 503 HDKEPGSNG------------------REKILVATKSLWKL 525 (527)
Q Consensus 503 ~~~e~~~~~------------------~ekiLi~~K~~w~~ 525 (527)
.+....+.. .--+++++|+-|..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~Kp~~~~ 172 (176)
T 2ld4_A 132 KELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEV 172 (176)
T ss_dssp EEEEEECCCHHHHHHHHHHTCCCCSSEEEEEEEEECCCSSC
T ss_pred ecCcccCCCHHHHHHHHHHhcccCCceEEEEEeccCCcccc
Confidence 321111111 13478899998865
|
| >3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=95.90 E-value=0.0096 Score=68.28 Aligned_cols=97 Identities=12% Similarity=0.161 Sum_probs=60.8
Q ss_pred eeeEeecCCCccchhhhccCCC---eeEEEecCCCCC-CchhHhhh----------ccc--cccccccCCCCCCCCCccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDP---VWVMNVVPARKS-STLSVIYD----------RGL--IGVYHDWCEPFSTYPRTYD 437 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~---VwvMnvvp~~~~-ntl~vi~e----------RGL--iG~~hdwce~fstYPrtyD 437 (527)
-..|||+|||.|.++.+|.... .-|.-| |-. ..+..+-+ .|+ |-.++.=-+.++....+||
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGV---DIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFD 798 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGV---DISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVD 798 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEE---ESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEE---ECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCee
Confidence 3579999999999999997764 233332 322 44444433 244 2222111122333348999
Q ss_pred hhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 438 LIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 438 LiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+|.+..++.++. + =....++-|+-|+|||| .+||..
T Consensus 799 lVV~~eVLeHL~------d-p~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 799 IGTCLEVIEHME------E-DQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp EEEEESCGGGSC------H-HHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred EEEEeCchhhCC------h-HHHHHHHHHHHHHcCCC-EEEEEe
Confidence 999999988764 1 11234778999999999 777764
|
| >3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.0023 Score=65.96 Aligned_cols=122 Identities=15% Similarity=0.196 Sum_probs=62.5
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc-cc---cc-cccCCCCCCC---CCccchhhh
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL-IG---VY-HDWCEPFSTY---PRTYDLIHV 441 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL-iG---~~-hdwce~fstY---PrtyDLiHa 441 (527)
.+|||++||.|+|+.++..... -.|+-+|.. ..+..+-+ .|+ -+ ++ .|..+..... ..+||+|.+
T Consensus 222 ~~VLDl~cG~G~~sl~la~~g~--~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~ 299 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMGGC--SQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM 299 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEeeccCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEE
Confidence 5799999999999988876532 012222222 22222221 133 11 11 1111111111 357999988
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH------HHHHHHHHHHhcCCc
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP------EVIDKVSRIANTVRW 498 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~------~~~~~i~~i~~~l~W 498 (527)
+--+............-.+..++.++=++|+|||.+++.... +..+.+++.+.....
T Consensus 300 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~ 362 (396)
T 3c0k_A 300 DPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGR 362 (396)
T ss_dssp CCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCC
Confidence 643211100000011134467888899999999999997421 234445555544443
|
| >1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A* | Back alignment and structure |
|---|
Probab=95.89 E-value=0.0018 Score=66.57 Aligned_cols=93 Identities=17% Similarity=0.094 Sum_probs=60.8
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccCCCC----CCCcccEEEecCccccc----
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLPF----PAFSFDIVHCSRCLIPF---- 209 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LPF----pD~SFDlV~cs~~l~hw---- 209 (527)
+|.++-++.... ..+...|.++.+++.|+++ ++. +.+..+|+..+.. .+++||+|++.--....
T Consensus 220 ~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~ 296 (382)
T 1wxx_A 220 AGGFALHLALGF---REVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKD 296 (382)
T ss_dssp TTHHHHHHHHHE---EEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCSTTS
T ss_pred cCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCCCCCCChhH
Confidence 566666666552 2344447788888888764 554 5677788755422 26899999985311111
Q ss_pred ----ccChHHHHHHHhhcccCCcEEEEecCCCC
Q 009719 210 ----TAYNATYLIEVDRLLRPGGYLVISGPPVQ 238 (527)
Q Consensus 210 ----~d~~~~aL~Ei~RVLRPGG~lviS~pp~~ 238 (527)
......++.++.++|+|||+|+++..+..
T Consensus 297 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 297 VERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp HHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 11223489999999999999999987544
|
| >1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* | Back alignment and structure |
|---|
Probab=95.86 E-value=0.0012 Score=62.36 Aligned_cols=85 Identities=20% Similarity=0.311 Sum_probs=51.4
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCCCchhHhhhc----cccc---cccccCCCCCCCC-C-ccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKSSTLSVIYDR----GLIG---VYHDWCEPFSTYP-R-TYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~ntl~vi~eR----GLiG---~~hdwce~fstYP-r-tyDLiHa~ 442 (527)
.+|||+|||.|.+++.|.+. .|..+-+.| ..+..+-++ |+-. ...|..+ .+| . .||+|.++
T Consensus 93 ~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~----~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~~~~~~fD~Ii~~ 165 (235)
T 1jg1_A 93 MNILEVGTGSGWNAALISEIVKTDVYTIERIP----ELVEFAKRNLERAGVKNVHVILGDGSK---GFPPKAPYDVIIVT 165 (235)
T ss_dssp CCEEEECCTTSHHHHHHHHHHCSCEEEEESCH----HHHHHHHHHHHHTTCCSEEEEESCGGG---CCGGGCCEEEEEEC
T ss_pred CEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCH----HHHHHHHHHHHHcCCCCcEEEECCccc---CCCCCCCccEEEEC
Confidence 48999999999999988553 344433222 333333332 3311 1122222 233 3 49999987
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
..+..+ .-++-|+|+|||.+++.-
T Consensus 166 ~~~~~~---------------~~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 166 AGAPKI---------------PEPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp SBBSSC---------------CHHHHHTEEEEEEEEEEE
T ss_pred CcHHHH---------------HHHHHHhcCCCcEEEEEE
Confidence 655432 237789999999999874
|
| >4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A* | Back alignment and structure |
|---|
Probab=95.86 E-value=0.003 Score=64.22 Aligned_cols=140 Identities=14% Similarity=0.097 Sum_probs=83.9
Q ss_pred ccCCCCeeeEeecCCCccchhhhccCC-CeeEEEecCCCCCCchhHhhh---cccc----ccccccCCCCCCCCCccchh
Q 009719 368 KLGTPAIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKSSTLSVIYD---RGLI----GVYHDWCEPFSTYPRTYDLI 439 (527)
Q Consensus 368 ~i~~~~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~ntl~vi~e---RGLi----G~~hdwce~fstYPrtyDLi 439 (527)
.+..+..+.|+|+|||.|.++.+|.++ |=... +=.|-|..+..+-+ .+.. =+-||. |..-+..+|++
T Consensus 174 ~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~--~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~---~~~~~~~~D~~ 248 (353)
T 4a6d_A 174 AFDLSVFPLMCDLGGGAGALAKECMSLYPGCKI--TVFDIPEVVWTAKQHFSFQEEEQIDFQEGDF---FKDPLPEADLY 248 (353)
T ss_dssp SSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEE--EEEECHHHHHHHHHHSCC--CCSEEEEESCT---TTSCCCCCSEE
T ss_pred hcCcccCCeEEeeCCCCCHHHHHHHHhCCCcee--EeccCHHHHHHHHHhhhhcccCceeeecCcc---ccCCCCCceEE
Confidence 456778899999999999999999543 31111 11122333332221 1111 112332 22223468999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC--------H------H------------HHHHHHHHH
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS--------P------E------------VIDKVSRIA 493 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~--------~------~------------~~~~i~~i~ 493 (527)
...+++-.|.+ + ....||-++=|.|+|||.++|-|. . + ..++.++++
T Consensus 249 ~~~~vlh~~~d-----~--~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll 321 (353)
T 4a6d_A 249 ILARVLHDWAD-----G--KCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLL 321 (353)
T ss_dssp EEESSGGGSCH-----H--HHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHH
T ss_pred EeeeecccCCH-----H--HHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHH
Confidence 99999988851 1 124688999999999999998751 0 0 134567777
Q ss_pred hcCCceeEEecCCCCCCCCceEEEEEecc
Q 009719 494 NTVRWTAAVHDKEPGSNGREKILVATKSL 522 (527)
Q Consensus 494 ~~l~W~~~~~~~e~~~~~~ekiLi~~K~~ 522 (527)
++--|+....-.- + ....+++|+|.-
T Consensus 322 ~~AGf~~v~v~~~-~--~~~~~i~ArKgt 347 (353)
T 4a6d_A 322 SSAGFRDFQFKKT-G--AIYDAILARKGT 347 (353)
T ss_dssp HHHTCEEEEEECC-S--SSCEEEEEECCC
T ss_pred HHCCCceEEEEEc-C--CceEEEEEEecC
Confidence 7777775433221 2 234689999963
|
| >2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.82 E-value=0.0021 Score=58.12 Aligned_cols=44 Identities=18% Similarity=0.181 Sum_probs=32.4
Q ss_pred CCCCcccEEEecCccc---cc-ccCh------HHHHHHHhhcccCCcEEEEecC
Q 009719 192 FPAFSFDIVHCSRCLI---PF-TAYN------ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 192 FpD~SFDlV~cs~~l~---hw-~d~~------~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+++++||+|+|..+.+ |+ .+.. ..++.++.|+|||||+|++...
T Consensus 93 ~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 93 LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 5577999999965432 22 2221 2489999999999999999864
|
| >3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium} | Back alignment and structure |
|---|
Probab=95.82 E-value=0.0026 Score=67.85 Aligned_cols=94 Identities=14% Similarity=0.122 Sum_probs=58.5
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCC-CCCCcccEEEecC------cccc-------cccC--------hHHH
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLP-FPAFSFDIVHCSR------CLIP-------FTAY--------NATY 216 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LP-FpD~SFDlV~cs~------~l~h-------w~d~--------~~~a 216 (527)
|.++.+++.++++ |+. +.+..+|+..++ +.+++||+|++.- .+.+ |... ...+
T Consensus 137 Dis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~i 216 (456)
T 3m4x_A 137 EIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEI 216 (456)
T ss_dssp CSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHH
Confidence 6777787777643 665 456667877775 4578999999631 1111 1111 1147
Q ss_pred HHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEE
Q 009719 217 LIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYEL 260 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~ 260 (527)
|.++.++|||||+|++|+-......+. +.++.+.+..-+++
T Consensus 217 L~~a~~~LkpGG~LvYsTCs~~~eEne---~vv~~~l~~~~~~l 257 (456)
T 3m4x_A 217 LSSAIKMLKNKGQLIYSTCTFAPEENE---EIISWLVENYPVTI 257 (456)
T ss_dssp HHHHHHTEEEEEEEEEEESCCCGGGTH---HHHHHHHHHSSEEE
T ss_pred HHHHHHhcCCCcEEEEEEeecccccCH---HHHHHHHHhCCCEE
Confidence 999999999999999998754433222 23444555433433
|
| >3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum} | Back alignment and structure |
|---|
Probab=95.82 E-value=0.0031 Score=60.25 Aligned_cols=67 Identities=15% Similarity=0.176 Sum_probs=47.3
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccC-CC-C-----CCCcccEEEecCcccccccChHHHHHHHhhcccCCcEE
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRR-LP-F-----PAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYL 230 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~-LP-F-----pD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~l 230 (527)
|.++.+++.|+++ |+. +.+.++|+.. +| + ++++||+|++... ......++.++.|+|||||++
T Consensus 102 D~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d~~----~~~~~~~l~~~~~~L~pGG~l 177 (237)
T 3c3y_A 102 DFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDFGFVDAD----KPNYIKYHERLMKLVKVGGIV 177 (237)
T ss_dssp ESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEE
T ss_pred ECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEEEECCc----hHHHHHHHHHHHHhcCCCeEE
Confidence 6677888888653 553 4566677643 34 2 3689999998632 222334899999999999999
Q ss_pred EEec
Q 009719 231 VISG 234 (527)
Q Consensus 231 viS~ 234 (527)
++..
T Consensus 178 v~d~ 181 (237)
T 3c3y_A 178 AYDN 181 (237)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9965
|
| >1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A* | Back alignment and structure |
|---|
Probab=95.81 E-value=0.0096 Score=58.91 Aligned_cols=87 Identities=16% Similarity=0.187 Sum_probs=55.9
Q ss_pred hhccccccccC-CeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcc---cEEEec---------
Q 009719 143 VASFGGSMLSE-NILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSF---DIVHCS--------- 203 (527)
Q Consensus 143 vgsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SF---DlV~cs--------- 203 (527)
.|.++..|... +..+ ...|.++.+++.|+++ ++. +.+..+|... +++ ++| |+|+|+
T Consensus 134 sG~~~~~la~~~~~~v---~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~-~~~-~~f~~~D~IvsnPPyi~~~~~ 208 (284)
T 1nv8_A 134 SGAIGVSVAKFSDAIV---FATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLE-PFK-EKFASIEMILSNPPYVKSSAH 208 (284)
T ss_dssp TSHHHHHHHHHSSCEE---EEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTG-GGG-GGTTTCCEEEECCCCBCGGGS
T ss_pred hhHHHHHHHHCCCCEE---EEEECCHHHHHHHHHHHHHcCCCCceEEEECcchh-hcc-cccCCCCEEEEcCCCCCcccc
Confidence 34444445544 3333 3337788899888764 553 5677777655 333 589 999996
Q ss_pred ---Cccccccc-------ChHHHHHHHh-hcccCCcEEEEecC
Q 009719 204 ---RCLIPFTA-------YNATYLIEVD-RLLRPGGYLVISGP 235 (527)
Q Consensus 204 ---~~l~hw~d-------~~~~aL~Ei~-RVLRPGG~lviS~p 235 (527)
.+. |.+. +...+++++. ++|+|||+|++..+
T Consensus 209 l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 209 LPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp CTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred cChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 222 2211 1114899999 99999999999765
|
| >3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=95.81 E-value=0.0021 Score=63.04 Aligned_cols=108 Identities=15% Similarity=0.186 Sum_probs=62.1
Q ss_pred eeEeecCCCccchhhhccCC----CeeEEEecCCCCCCchhHhh----hccc---cccccccCCCCCCCCCccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTSD----PVWVMNVVPARKSSTLSVIY----DRGL---IGVYHDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~----~VwvMnvvp~~~~ntl~vi~----eRGL---iG~~hdwce~fstYPrtyDLiHa~~ 443 (527)
.+|+|+|||.|+|+..|... .|..+-+.| ..+..+- ..|+ .=+..|..+ ++ .+.+||+|-++.
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~----~av~~a~~n~~~n~l~~~~~~~~d~~~-~~-~~~~~D~Vi~d~ 194 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNP----TAYHYLCENIKLNKLNNVIPILADNRD-VE-LKDVADRVIMGY 194 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCSEEEEEECCH----HHHHHHHHHHHHTTCSSEEEEESCGGG-CC-CTTCEEEEEECC
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCH----HHHHHHHHHHHHcCCCCEEEEECChHH-cC-ccCCceEEEECC
Confidence 57999999999999887554 344333322 2222221 1233 111112222 21 256899986642
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH------HHH-HHHHHHHhcCCceeE
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP------EVI-DKVSRIANTVRWTAA 501 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~------~~~-~~i~~i~~~l~W~~~ 501 (527)
.. ....++.++-|+|+|||.+++.+.. +.. +.++.+.+.+.+++.
T Consensus 195 p~-------------~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (272)
T 3a27_A 195 VH-------------KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLI 246 (272)
T ss_dssp CS-------------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEE
T ss_pred cc-------------cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeE
Confidence 21 4567888989999999999998532 233 334555555555544
|
| >1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A* | Back alignment and structure |
|---|
Probab=95.79 E-value=0.00098 Score=67.29 Aligned_cols=93 Identities=14% Similarity=0.228 Sum_probs=59.8
Q ss_pred CeeeEeecCCCccchhhhccCC--C--eeEEEecCCCCCCchhHhhh-ccccccccccCCCCCCCCCccchhhhcCcccc
Q 009719 373 AIRNIMDMNAFFGGFAAALTSD--P--VWVMNVVPARKSSTLSVIYD-RGLIGVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~--~--VwvMnvvp~~~~ntl~vi~e-RGLiG~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
...+|+|+|||.|.++.+|.+. . +.++-. | ..+..+-+ .++--+-+|..++ +| .||++.+..++-.
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~d~~~~---~~-~~D~v~~~~vlh~ 263 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-P----QVVGNLTGNENLNFVGGDMFKS---IP-SADAVLLKWVLHD 263 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-H----HHHSSCCCCSSEEEEECCTTTC---CC-CCSEEEEESCGGG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-H----HHHhhcccCCCcEEEeCccCCC---CC-CceEEEEcccccC
Confidence 4579999999999999998543 2 333332 2 11111111 1222233444443 45 4999999999987
Q ss_pred ccCCCCCCCCCcccccceeecccccC---CcEEEEeC
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRP---EGTVVVRD 481 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP---~G~~iird 481 (527)
|.+ . ....+|-++-|+|+| ||.++|-|
T Consensus 264 ~~d-----~--~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 264 WND-----E--QSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp SCH-----H--HHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred CCH-----H--HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 751 1 123789999999999 99999864
|
| >1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=95.78 E-value=0.0035 Score=60.21 Aligned_cols=106 Identities=13% Similarity=0.173 Sum_probs=61.9
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCC-CchhHhhhc-----c-ccc----cccccCCCCCCC-CCccchh
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKS-STLSVIYDR-----G-LIG----VYHDWCEPFSTY-PRTYDLI 439 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~-ntl~vi~eR-----G-LiG----~~hdwce~fstY-PrtyDLi 439 (527)
.+|||+|||.|.++.+|... ..-| +-.|-. ..+..+-++ | +.. +..|..+. + + +.+||+|
T Consensus 101 ~~vLdiG~G~G~~~~~l~~~~~~~~~v---~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~-~-~~~~~~D~v 175 (280)
T 1i9g_A 101 ARVLEAGAGSGALTLSLLRAVGPAGQV---ISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS-E-LPDGSVDRA 175 (280)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEE---EEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC-C-CCTTCEEEE
T ss_pred CEEEEEcccccHHHHHHHHHhCCCCEE---EEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc-C-CCCCceeEE
Confidence 37999999999999988653 2322 223332 444444333 3 211 12233332 1 2 3689998
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-CHHHHHHHHHHHhc-CCce
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDKVSRIANT-VRWT 499 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~i~~i~~~-l~W~ 499 (527)
-++. - ....+|-++-|+|+|||.+++.. ..+.+.++.+.++. ..|.
T Consensus 176 ~~~~-~-------------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~ 223 (280)
T 1i9g_A 176 VLDM-L-------------APWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWT 223 (280)
T ss_dssp EEES-S-------------CGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBC
T ss_pred EECC-c-------------CHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcC
Confidence 7631 1 22468999999999999999975 33444444443333 4443
|
| >3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=95.77 E-value=0.0057 Score=62.98 Aligned_cols=95 Identities=15% Similarity=0.092 Sum_probs=62.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC---CcEEeeccccCC-C-C--CCCcccEEEecCcc-----
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI---PAFVAMLGTRRL-P-F--PAFSFDIVHCSRCL----- 206 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~---pa~~~v~dae~L-P-F--pD~SFDlV~cs~~l----- 206 (527)
+|.|+-++...+.. .+...|.++.+++.|+++ |+ .+.+..+|+..+ + + .+++||+|++.--.
T Consensus 231 ~G~~sl~la~~g~~--~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~ 308 (396)
T 3c0k_A 231 TGGFAVSALMGGCS--QVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENK 308 (396)
T ss_dssp TCSHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCS
T ss_pred CCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCCh
Confidence 67777777777531 233337778888887654 56 356777886554 2 1 25789999986311
Q ss_pred ---cccccChHHHHHHHhhcccCCcEEEEecCCCCC
Q 009719 207 ---IPFTAYNATYLIEVDRLLRPGGYLVISGPPVQW 239 (527)
Q Consensus 207 ---~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp~~~ 239 (527)
.+.......++.++.++|+|||.++++..+...
T Consensus 309 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 344 (396)
T 3c0k_A 309 SQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLM 344 (396)
T ss_dssp SSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTC
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC
Confidence 111122234899999999999999998875443
|
| >1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38 | Back alignment and structure |
|---|
Probab=95.77 E-value=0.0017 Score=65.21 Aligned_cols=122 Identities=16% Similarity=0.107 Sum_probs=62.9
Q ss_pred eeEeecCCCccchhhhccCC--C-eeEEEecCCCCC-CchhHhhhc----ccc--ccc-cccCCCCCCCCCccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTSD--P-VWVMNVVPARKS-STLSVIYDR----GLI--GVY-HDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~-VwvMnvvp~~~~-ntl~vi~eR----GLi--G~~-hdwce~fstYPrtyDLiHa~~ 443 (527)
..|||+|||.|+++.+|... + --| +-.|.. ..+..+-++ |+- -+. .|.. .++.++.+||+|-++-
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~~~~~v---~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~-~~~~~~~~fD~Il~d~ 195 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMRNDGVI---YAFDVDENRLRETRLNLSRLGVLNVILFHSSSL-HIGELNVEFDKILLDA 195 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTTTCSEE---EEECSCHHHHHHHHHHHHHHTCCSEEEESSCGG-GGGGGCCCEEEEEEEC
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEE---EEEcCCHHHHHHHHHHHHHhCCCeEEEEECChh-hcccccccCCEEEEeC
Confidence 47999999999998888542 1 222 223332 344444333 441 111 2221 2222456899998753
Q ss_pred ccccc----cCCCCCCCC--Cc-------ccccceeecccccCCcEEEEeC----CHHHHHHHHHHHhcCCcee
Q 009719 444 IESLI----KNPGSNKNS--CS-------LVDLMVEMDRMLRPEGTVVVRD----SPEVIDKVSRIANTVRWTA 500 (527)
Q Consensus 444 ~fs~~----~~~~~~~~r--C~-------~~~illEmDRILRP~G~~iird----~~~~~~~i~~i~~~l~W~~ 500 (527)
-.|.. ..|...... -. -..+|-++-|+|+|||.+++.. ..+.-..|+.+++...++.
T Consensus 196 Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~~ 269 (315)
T 1ixk_A 196 PCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVEL 269 (315)
T ss_dssp CTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEEE
T ss_pred CCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCEE
Confidence 32211 000000000 00 0367888999999999999963 1222233555555544443
|
| >1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A | Back alignment and structure |
|---|
Probab=95.75 E-value=0.0024 Score=60.91 Aligned_cols=50 Identities=10% Similarity=0.053 Sum_probs=31.3
Q ss_pred CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH
Q 009719 434 RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP 483 (527)
Q Consensus 434 rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~ 483 (527)
.+||+|-|+-.|........+...-....++-++-|+|+|||++++.+..
T Consensus 167 ~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 167 SAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp CCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred CCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeCcc
Confidence 48999998766543220000000112336788899999999999996543
|
| >2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51 | Back alignment and structure |
|---|
Probab=95.74 E-value=0.002 Score=65.57 Aligned_cols=122 Identities=13% Similarity=0.051 Sum_probs=65.2
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----ccc----cccc-ccCCCCCCC---CCccchhhh
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLI----GVYH-DWCEPFSTY---PRTYDLIHV 441 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLi----G~~h-dwce~fstY---PrtyDLiHa 441 (527)
..|||++||.|+|+.++..... .|+-+|.. ..+..+-++ |+- -+++ |..+..... ..+||+|=+
T Consensus 155 ~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred CcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 4799999999999988876654 44444543 444433322 331 1111 111100001 357999877
Q ss_pred cCc-cccccCCCCC--CCCCcccccceeecccccCCcEEEEeC------CH-HHHHHHHHHHhcCCceeE
Q 009719 442 SGI-ESLIKNPGSN--KNSCSLVDLMVEMDRMLRPEGTVVVRD------SP-EVIDKVSRIANTVRWTAA 501 (527)
Q Consensus 442 ~~~-fs~~~~~~~~--~~rC~~~~illEmDRILRP~G~~iird------~~-~~~~~i~~i~~~l~W~~~ 501 (527)
+-- |..-. ..+ ...=.+..++-++-|+|+|||++++.. +. ...+.+++.++....++.
T Consensus 232 dPP~~~~~~--~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 232 DPPKFGRGT--HGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp CCCSEEECT--TCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred CCccccCCc--hHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 432 22100 000 000013467888899999999977753 22 234445556666666554
|
| >2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=95.67 E-value=0.0014 Score=60.95 Aligned_cols=97 Identities=10% Similarity=-0.019 Sum_probs=54.6
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc--cccc-cccCCCCCCCCCccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL--IGVY-HDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL--iG~~-hdwce~fstYPrtyDLiHa~~~fs 446 (527)
.+|||+|||.|.++..+.....- .|+-+|.. ..+..+-+ .|+ +-++ .|..+..+.-+.+||+|=++..|.
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~~--~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYAA--GATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CeEEEeCCCcCHHHHHHHhcCCC--EEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 47999999999998875444321 33444433 33443322 233 1111 222221222346899998765533
Q ss_pred cccCCCCCCCCCcccccceee--cccccCCcEEEEeCCH
Q 009719 447 LIKNPGSNKNSCSLVDLMVEM--DRMLRPEGTVVVRDSP 483 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEm--DRILRP~G~~iird~~ 483 (527)
. =....++-++ -|+|+|||.+++....
T Consensus 134 ~----------~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 134 R----------GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp T----------TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred C----------CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 1 0124455555 4579999999998654
|
| >3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae} | Back alignment and structure |
|---|
Probab=95.65 E-value=0.0016 Score=63.99 Aligned_cols=94 Identities=12% Similarity=0.122 Sum_probs=56.5
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCC--CCchhHhhhc---------cc-------c-ccccccCCCCCCC---
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARK--SSTLSVIYDR---------GL-------I-GVYHDWCEPFSTY--- 432 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~--~ntl~vi~eR---------GL-------i-G~~hdwce~fstY--- 432 (527)
.+|||+|||.|.++.+|...... .|+-+|- +..+..+-++ |+ + -...+|.+.....
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~~--~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 158 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGAD--QVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRC 158 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTCS--EEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHH
T ss_pred CeEEEecccccHHHHHHHHcCCC--EEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhh
Confidence 48999999999998887655421 2222333 1333333221 22 2 1225677653322
Q ss_pred --CCccchhhhcCccccccCCCCCCCCCcccccceeeccccc---C--CcEEEE
Q 009719 433 --PRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLR---P--EGTVVV 479 (527)
Q Consensus 433 --PrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILR---P--~G~~ii 479 (527)
+.+||+|-+..++-.. -....++-++.|+|+ | ||.+++
T Consensus 159 ~~~~~fD~Ii~~dvl~~~---------~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 159 TGLQRFQVVLLADLLSFH---------QAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp HSCSSBSEEEEESCCSCG---------GGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred ccCCCCCEEEEeCcccCh---------HHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 4789999876655422 124678899999999 9 996544
|
| >2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A* | Back alignment and structure |
|---|
Probab=95.59 E-value=0.012 Score=59.27 Aligned_cols=132 Identities=12% Similarity=0.121 Sum_probs=70.1
Q ss_pred eeEeecCC------Cccc-hhhhccC--CCeeEEEecCCCCCCchhHhhhccccc-cccccCCCCCCCCCccchhhhcCc
Q 009719 375 RNIMDMNA------FFGG-FAAALTS--DPVWVMNVVPARKSSTLSVIYDRGLIG-VYHDWCEPFSTYPRTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~a------g~Gg-FaAaL~~--~~VwvMnvvp~~~~ntl~vi~eRGLiG-~~hdwce~fstYPrtyDLiHa~~~ 444 (527)
..|||+|| |.|+ .+|.+.. -.|.-+-+-|. + + ++-= +..|+.+. + ++.+||+|.++..
T Consensus 65 ~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-----v----~-~v~~~i~gD~~~~-~-~~~~fD~Vvsn~~ 132 (290)
T 2xyq_A 65 MRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-----V----S-DADSTLIGDCATV-H-TANKWDLIISDMY 132 (290)
T ss_dssp CEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-----B----C-SSSEEEESCGGGC-C-CSSCEEEEEECCC
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-----C----C-CCEEEEECccccC-C-ccCcccEEEEcCC
Confidence 46999999 5576 3333443 23444444443 1 1 2222 34455442 2 3578999998632
Q ss_pred ccc--ccCCCCCCCCCcccccceeecccccCCcEEEEeC-CHHHHHHHHHHHhcCCc-eeEEecCCCCCCCCceEEEEEe
Q 009719 445 ESL--IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDKVSRIANTVRW-TAAVHDKEPGSNGREKILVATK 520 (527)
Q Consensus 445 fs~--~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~i~~i~~~l~W-~~~~~~~e~~~~~~ekiLi~~K 520 (527)
... ..........-.+..++-|+-|+|||||.+++.. ......++.++++...+ .+...- ......|.+|+++.
T Consensus 133 ~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~~a--sr~~s~e~~lv~~~ 210 (290)
T 2xyq_A 133 DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVTN--VNASSSEAFLIGAN 210 (290)
T ss_dssp CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEEG--GGTTSSCEEEEEEE
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEEEE--cCCCchheEEecCC
Confidence 211 0000000111112367888999999999999954 11122356666666634 444441 22233688888875
|
| >3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A* | Back alignment and structure |
|---|
Probab=95.58 E-value=0.003 Score=63.06 Aligned_cols=142 Identities=15% Similarity=0.124 Sum_probs=74.1
Q ss_pred CeeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhc------cc----ccc-ccccCCCCCC-CCCccch
Q 009719 373 AIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDR------GL----IGV-YHDWCEPFST-YPRTYDL 438 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eR------GL----iG~-~hdwce~fst-YPrtyDL 438 (527)
.-++|||+|||.|+++..|.+. ++--+ +-++-. .-+.++-++ ++ +-+ ..|..+.... -+.+||+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v--~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHC--DLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEE--EEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEE--EEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 3478999999999999999766 33221 111211 222222221 11 111 1122111111 2578999
Q ss_pred hhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-----HHHHHHHHHHHhcCCce-eEEec--CCCCCC
Q 009719 439 IHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-----PEVIDKVSRIANTVRWT-AAVHD--KEPGSN 510 (527)
Q Consensus 439 iHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-----~~~~~~i~~i~~~l~W~-~~~~~--~e~~~~ 510 (527)
|-++....... ...---..++-++-|+|+|||.+++... ......+.+.++..-+. +.... ....+.
T Consensus 173 Ii~d~~~~~~~-----~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~ 247 (304)
T 3bwc_A 173 VIIDTTDPAGP-----ASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPC 247 (304)
T ss_dssp EEEECC--------------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTT
T ss_pred EEECCCCcccc-----chhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccC
Confidence 99864332110 0111114677899999999999999632 23455566655555443 33321 223334
Q ss_pred CCceEEEEEec
Q 009719 511 GREKILVATKS 521 (527)
Q Consensus 511 ~~ekiLi~~K~ 521 (527)
+.-.+++|.|+
T Consensus 248 g~w~f~~as~~ 258 (304)
T 3bwc_A 248 GSIGTLVCSKK 258 (304)
T ss_dssp SCCEEEEEESS
T ss_pred cceEEEEEeCC
Confidence 55678888886
|
| >1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35 | Back alignment and structure |
|---|
Probab=95.58 E-value=0.0077 Score=62.55 Aligned_cols=47 Identities=21% Similarity=0.291 Sum_probs=37.7
Q ss_pred cCCCCCCCcccEEEecCcccccccChH---------------------------------HHHHHHhhcccCCcEEEEec
Q 009719 188 RRLPFPAFSFDIVHCSRCLIPFTAYNA---------------------------------TYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 188 e~LPFpD~SFDlV~cs~~l~hw~d~~~---------------------------------~aL~Ei~RVLRPGG~lviS~ 234 (527)
....||++|||+|+++.+| ||..... .+|+-..|.|+|||+++++.
T Consensus 131 y~rlfp~~S~d~v~Ss~aL-HWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSL-MWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSCCSCTTCBSCEEEESCT-TBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhccCCCCceEEEEehhhh-hhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 4578999999999999997 8854311 13777899999999999976
Q ss_pred C
Q 009719 235 P 235 (527)
Q Consensus 235 p 235 (527)
.
T Consensus 210 ~ 210 (359)
T 1m6e_X 210 L 210 (359)
T ss_dssp E
T ss_pred e
Confidence 4
|
| >1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A | Back alignment and structure |
|---|
Probab=95.54 E-value=0.0042 Score=63.39 Aligned_cols=101 Identities=16% Similarity=0.181 Sum_probs=56.8
Q ss_pred CeeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhc------cc----cc-cccccCCCCCCCC-Cccch
Q 009719 373 AIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDR------GL----IG-VYHDWCEPFSTYP-RTYDL 438 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eR------GL----iG-~~hdwce~fstYP-rtyDL 438 (527)
.-++|||+|||.|+++..|... ++.- |+-++-. .-+.++-++ |+ +- +..|..+.+..++ .+||+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~--V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQ--IDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCE--EEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCE--EEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 4579999999999999999876 3332 2222222 223332221 32 11 1223222222233 78999
Q ss_pred hhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 439 IHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 439 iHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
|-++.. ..+. ....-....++-++-|+|+|||.+++.
T Consensus 198 Ii~d~~-~p~~----~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 198 VIVDSS-DPIG----PAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEECCC-CTTS----GGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCC-CccC----cchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 988532 2111 001000246778999999999999997
|
| >3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.53 E-value=0.0085 Score=60.51 Aligned_cols=137 Identities=18% Similarity=0.146 Sum_probs=71.7
Q ss_pred CCCCeeeEeecCCCccchhhhccC-----CCeeEEEecCCCCCCchhHhh----hccc--ccccc-ccCCCCCCCCCccc
Q 009719 370 GTPAIRNIMDMNAFFGGFAAALTS-----DPVWVMNVVPARKSSTLSVIY----DRGL--IGVYH-DWCEPFSTYPRTYD 437 (527)
Q Consensus 370 ~~~~iRnvmDm~ag~GgFaAaL~~-----~~VwvMnvvp~~~~ntl~vi~----eRGL--iG~~h-dwce~fstYPrtyD 437 (527)
.+..-..|+|.+||.|+|+..+.. ..|+-.-+-| ..+..+- ..|+ |-+.+ |.. .++.....||
T Consensus 200 ~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~----~~i~~a~~n~~~~g~~~i~~~~~D~~-~~~~~~~~~D 274 (354)
T 3tma_A 200 DARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDE----KRLGLAREAALASGLSWIRFLRADAR-HLPRFFPEVD 274 (354)
T ss_dssp TCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCH----HHHHHHHHHHHHTTCTTCEEEECCGG-GGGGTCCCCS
T ss_pred CCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCH----HHHHHHHHHHHHcCCCceEEEeCChh-hCccccCCCC
Confidence 333446899999999999765533 3343332221 2232222 2343 22221 211 1222235689
Q ss_pred hhhhcCccccccCCCCCCCCCc----ccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCceeEEe-cCCCCCCCC
Q 009719 438 LIHVSGIESLIKNPGSNKNSCS----LVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAVH-DKEPGSNGR 512 (527)
Q Consensus 438 LiHa~~~fs~~~~~~~~~~rC~----~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~~~~-~~e~~~~~~ 512 (527)
+|-++--|..-. .+.-. ...++-++-|+|+|||.+++-..... .++++.+ ..|+.... ...+|.. .
T Consensus 275 ~Ii~npPyg~r~-----~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~--~~~~~~~-~g~~~~~~~~l~~g~l-~ 345 (354)
T 3tma_A 275 RILANPPHGLRL-----GRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPA--LLKRALP-PGFALRHARVVEQGGV-Y 345 (354)
T ss_dssp EEEECCCSCC---------CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHH--HHHHHCC-TTEEEEEEEECCBTTB-C
T ss_pred EEEECCCCcCcc-----CCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHH--HHHHHhh-cCcEEEEEEEEEeCCE-E
Confidence 999865443211 00011 14678899999999999988754332 2445555 67765433 2223332 2
Q ss_pred ceEEEEEe
Q 009719 513 EKILVATK 520 (527)
Q Consensus 513 ekiLi~~K 520 (527)
-.|++++|
T Consensus 346 ~~i~vl~r 353 (354)
T 3tma_A 346 PRVFVLEK 353 (354)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEc
Confidence 45676665
|
| >1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A* | Back alignment and structure |
|---|
Probab=95.53 E-value=0.004 Score=61.98 Aligned_cols=53 Identities=17% Similarity=0.362 Sum_probs=38.5
Q ss_pred ccccCC-CCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 422 YHDWCE-PFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 422 ~hdwce-~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
.||+.+ +|+ .+..||+|-|..++..+. .=....++-++-+.|+|||++++...
T Consensus 200 ~~dl~~~~~~-~~~~fDlI~crnvliyf~-------~~~~~~vl~~~~~~L~pgG~L~lg~s 253 (274)
T 1af7_A 200 SVNLLEKQYN-VPGPFDAIFCRNVMIYFD-------KTTQEDILRRFVPLLKPDGLLFAGHS 253 (274)
T ss_dssp ECCTTCSSCC-CCCCEEEEEECSSGGGSC-------HHHHHHHHHHHGGGEEEEEEEEECTT
T ss_pred ecccCCCCCC-cCCCeeEEEECCchHhCC-------HHHHHHHHHHHHHHhCCCcEEEEEec
Confidence 467766 243 136899999988876553 11125789999999999999999654
|
| >2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca} | Back alignment and structure |
|---|
Probab=95.51 E-value=0.0067 Score=59.62 Aligned_cols=100 Identities=12% Similarity=0.079 Sum_probs=58.7
Q ss_pred CCeeeEeecCCCc---cchhhhccC--CCeeEEEecCCCC-CCchhHhhhc----cccc-cccccCCC-----C----CC
Q 009719 372 PAIRNIMDMNAFF---GGFAAALTS--DPVWVMNVVPARK-SSTLSVIYDR----GLIG-VYHDWCEP-----F----ST 431 (527)
Q Consensus 372 ~~iRnvmDm~ag~---GgFaAaL~~--~~VwvMnvvp~~~-~ntl~vi~eR----GLiG-~~hdwce~-----f----st 431 (527)
..++.|||+|||. |.++..+.. ... .|+=+|. +..|..+-++ +-+- +..|..+. . .+
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~---~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQSVNPDA---RVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHHHCTTC---EEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHhCCCC---EEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhcc
Confidence 4579999999999 988655532 122 1222222 2333332222 1110 11122110 0 12
Q ss_pred CC-CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 432 YP-RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 432 YP-rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+| .+||+|=+..+|-.+. +. ....+|-|+-|+|+|||++++.+
T Consensus 153 ~d~~~~d~v~~~~vlh~~~------d~-~~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 153 IDFSRPAAIMLVGMLHYLS------PD-VVDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp CCTTSCCEEEETTTGGGSC------TT-THHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCCCEEEEEechhhhCC------cH-HHHHHHHHHHHhCCCCcEEEEEE
Confidence 33 4789988887777654 22 56789999999999999999985
|
| >4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.44 E-value=0.0047 Score=64.35 Aligned_cols=115 Identities=16% Similarity=0.146 Sum_probs=65.5
Q ss_pred HHHHHHHHHhhh--ccCCCCeeeEeecCCCccchh---hhccCCCeeEEEecCCCCCCchhHhhhccc---cccccccCC
Q 009719 356 RRVAYYKNTLNV--KLGTPAIRNIMDMNAFFGGFA---AALTSDPVWVMNVVPARKSSTLSVIYDRGL---IGVYHDWCE 427 (527)
Q Consensus 356 ~~v~~Y~~~l~~--~i~~~~iRnvmDm~ag~GgFa---AaL~~~~VwvMnvvp~~~~ntl~vi~eRGL---iG~~hdwce 427 (527)
.|...|.+.|.. .+..++ .|||+|||+|-++ |..-.+.|..+-.-|. ......++-+.|| |=+++.--|
T Consensus 66 ~Rt~aY~~Ai~~~~~~~~~k--~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~-~~~a~~~~~~n~~~~~i~~i~~~~~ 142 (376)
T 4hc4_A 66 VRTDAYRLGILRNWAALRGK--TVLDVGAGTGILSIFCAQAGARRVYAVEASAI-WQQAREVVRFNGLEDRVHVLPGPVE 142 (376)
T ss_dssp HHHHHHHHHHHTTHHHHTTC--EEEEETCTTSHHHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred HHHHHHHHHHHhCHHhcCCC--EEEEeCCCccHHHHHHHHhCCCEEEEEeChHH-HHHHHHHHHHcCCCceEEEEeeeee
Confidence 455668776632 122343 6999999999764 3333455665543221 1123345566676 444443333
Q ss_pred CCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 428 PFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 428 ~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
-+. .|.-+|+|=+.-+.+... .--.+..++-..||.|+|||.+|-+
T Consensus 143 ~~~-lpe~~DvivsE~~~~~l~------~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 143 TVE-LPEQVDAIVSEWMGYGLL------HESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TCC-CSSCEEEEECCCCBTTBT------TTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred eec-CCccccEEEeeccccccc------ccchhhhHHHHHHhhCCCCceECCc
Confidence 332 477799875532221111 1223567888899999999998865
|
| >1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32 | Back alignment and structure |
|---|
Probab=95.42 E-value=0.082 Score=48.17 Aligned_cols=105 Identities=9% Similarity=-0.030 Sum_probs=65.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCccccccc-ChHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA-YNATYL 217 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d-~~~~aL 217 (527)
.|.++..|..++.. .+...|.++.+++.|+++ ++.+.+..+|+..+| ++||+|++.-.++++.. ....++
T Consensus 60 ~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l 134 (207)
T 1wy7_A 60 TGVLSYGALLLGAK--EVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGSQRKHADRPFL 134 (207)
T ss_dssp TCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCSSSSTTTTHHHH
T ss_pred CCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCccccCCchHHHH
Confidence 45555556555432 233337788899988875 335677788888875 48999999877655542 223489
Q ss_pred HHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEE
Q 009719 218 IEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYEL 260 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~ 260 (527)
.++.|+| ||.+++..++ ....+.+.+..+...|+.
T Consensus 135 ~~~~~~l--~~~~~~~~~~------~~~~~~~~~~l~~~g~~~ 169 (207)
T 1wy7_A 135 LKAFEIS--DVVYSIHLAK------PEVRRFIEKFSWEHGFVV 169 (207)
T ss_dssp HHHHHHC--SEEEEEEECC------HHHHHHHHHHHHHTTEEE
T ss_pred HHHHHhc--CcEEEEEeCC------cCCHHHHHHHHHHCCCeE
Confidence 9999999 6666555321 122334455555555554
|
| >2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A* | Back alignment and structure |
|---|
Probab=95.40 E-value=0.0055 Score=61.91 Aligned_cols=142 Identities=17% Similarity=0.143 Sum_probs=74.1
Q ss_pred eeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhc------cc----cc-cccccCCCCCCCCCccchhh
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDR------GL----IG-VYHDWCEPFSTYPRTYDLIH 440 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eR------GL----iG-~~hdwce~fstYPrtyDLiH 440 (527)
-++|||+|||.|+++.++.+. +..- |+-+|-. .-+.++-++ |+ +- +..|..+.....+.+||+|-
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~~~--v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSVEN--IDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTCCE--EEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCCCE--EEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 378999999999999999876 3332 2222221 223332221 11 11 11222221112357899998
Q ss_pred hcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-----CHHHHHHHHHHHhcCCceeEEec--CCCCCCCCc
Q 009719 441 VSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-----SPEVIDKVSRIANTVRWTAAVHD--KEPGSNGRE 513 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-----~~~~~~~i~~i~~~l~W~~~~~~--~e~~~~~~e 513 (527)
++. +..+. ......-..++-++-|+|+|||.+++.. ..+.+..+.+.++..--.+.... ....+.+.-
T Consensus 195 ~d~-~~p~~----~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w 269 (321)
T 2pt6_A 195 VDS-SDPIG----PAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCI 269 (321)
T ss_dssp EEC-CCSSS----GGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEE
T ss_pred ECC-cCCCC----cchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEEEEeccccCceE
Confidence 763 22221 0000001467778999999999999963 23444454444444433443321 222222334
Q ss_pred eEEEEEecc
Q 009719 514 KILVATKSL 522 (527)
Q Consensus 514 kiLi~~K~~ 522 (527)
.+++|.|++
T Consensus 270 ~f~~as~~~ 278 (321)
T 2pt6_A 270 GILCCSKTD 278 (321)
T ss_dssp EEEEEESST
T ss_pred EEEEeeCCC
Confidence 577888864
|
| >1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32 | Back alignment and structure |
|---|
Probab=95.36 E-value=0.0094 Score=54.50 Aligned_cols=114 Identities=10% Similarity=0.092 Sum_probs=66.2
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc-cccccccCCCCCCCCCccchhhhcCccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL-IGVYHDWCEPFSTYPRTYDLIHVSGIESLI 448 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL-iG~~hdwce~fstYPrtyDLiHa~~~fs~~ 448 (527)
.+|||+|||.|.|+.+|...+.- +|+-.|.. ..+..+-++ |+ +-+. +..+..+|.+||+|-++--|...
T Consensus 51 ~~vlD~g~G~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~---~~d~~~~~~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 51 KVVADLGAGTGVLSYGALLLGAK--EVICVEVDKEAVDVLIENLGEFKGKFKVF---IGDVSEFNSRVDIVIMNPPFGSQ 125 (207)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHTGGGTTSEEEE---ESCGGGCCCCCSEEEECCCCSSS
T ss_pred CEEEEeeCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHcCCCEEEE---ECchHHcCCCCCEEEEcCCCccc
Confidence 58999999999999988665321 12222222 333333222 32 1111 22223356799999998776644
Q ss_pred cCCCCCCCCCcccccceeecccccCCcEEEEe-CCHHHHHHHHHHHhcCCceeEE
Q 009719 449 KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR-DSPEVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 449 ~~~~~~~~rC~~~~illEmDRILRP~G~~iir-d~~~~~~~i~~i~~~l~W~~~~ 502 (527)
. .. ....++-++-|+| ||.+++. ...+..+.+.+++....|++..
T Consensus 126 ~------~~-~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 126 R------KH-ADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp S------TT-TTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEEEE
T ss_pred c------CC-chHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeEEE
Confidence 2 11 1234566677777 5555444 2666777788887777776653
|
| >3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=95.29 E-value=0.0058 Score=58.84 Aligned_cols=76 Identities=14% Similarity=0.136 Sum_probs=48.7
Q ss_pred CeeEEeeccCcChHHHHHHHHHcCCC--cEEeeccccC-CCCC-----CCcccEEEecCcccccccChHHHHHHHhhccc
Q 009719 154 NILTLSFAPRDSHKAQIQFALERGIP--AFVAMLGTRR-LPFP-----AFSFDIVHCSRCLIPFTAYNATYLIEVDRLLR 225 (527)
Q Consensus 154 ~V~~msiAp~D~seaqvq~A~eRg~p--a~~~v~dae~-LPFp-----D~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLR 225 (527)
.|+++++.+.....++- .+.+.|+. +.+.++|+.. ++.. +++||+|++... ......+|.++.|+||
T Consensus 87 ~v~~iD~~~~~~~~a~~-~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~~d~~----~~~~~~~l~~~~~~Lk 161 (242)
T 3r3h_A 87 QVITCDINEGWTKHAHP-YWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDAD----KTNYLNYYELALKLVT 161 (242)
T ss_dssp EEEEEECCCSSCCCSHH-HHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEEEESC----GGGHHHHHHHHHHHEE
T ss_pred EEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEEEcCC----hHHhHHHHHHHHHhcC
Confidence 45666666554332222 22233553 5677778744 4432 689999998753 2222348999999999
Q ss_pred CCcEEEEec
Q 009719 226 PGGYLVISG 234 (527)
Q Consensus 226 PGG~lviS~ 234 (527)
|||++++..
T Consensus 162 pGG~lv~d~ 170 (242)
T 3r3h_A 162 PKGLIAIDN 170 (242)
T ss_dssp EEEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999964
|
| >2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A* | Back alignment and structure |
|---|
Probab=95.19 E-value=0.024 Score=57.30 Aligned_cols=81 Identities=10% Similarity=0.106 Sum_probs=55.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
+|.|+-. ...+..+..+ |.++.+++.|+++ ++ .+.+..+|+..++ ++||+|++.-- + ....+
T Consensus 206 ~G~~~l~-a~~~~~V~~v---D~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP--~---~~~~~ 273 (336)
T 2yx1_A 206 VGPFSIA-CKNAKKIYAI---DINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLP--K---FAHKF 273 (336)
T ss_dssp TSHHHHH-TTTSSEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCT--T---TGGGG
T ss_pred cCHHHHh-ccCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCc--H---hHHHH
Confidence 5666655 5433333333 6777888877654 54 3667778887766 89999998631 1 11248
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
+.++.++|+|||.++++..
T Consensus 274 l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 274 IDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCCEEEEEEe
Confidence 9999999999999998654
|
| >2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45 | Back alignment and structure |
|---|
Probab=95.15 E-value=0.025 Score=56.95 Aligned_cols=77 Identities=17% Similarity=0.137 Sum_probs=56.0
Q ss_pred eeccCcChHHHHHHHHH----cCCCcEEeeccccCCCCCCCcccEEEecCcccccccCh-----------------HHHH
Q 009719 159 SFAPRDSHKAQIQFALE----RGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-----------------ATYL 217 (527)
Q Consensus 159 siAp~D~seaqvq~A~e----Rg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-----------------~~aL 217 (527)
.+...|.++.+++.|+. .|+.+.+..+|+.. +.++..||+|++.--+.++.... ..++
T Consensus 161 ~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~-~~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l 239 (344)
T 2f8l_A 161 HASGVDVDDLLISLALVGADLQRQKMTLLHQDGLA-NLLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFI 239 (344)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTS-CCCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCC-ccccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHH
Confidence 44455777788888865 36667777788755 44578999999986654443221 1379
Q ss_pred HHHhhcccCCcEEEEecCC
Q 009719 218 IEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~pp 236 (527)
.++.+.|||||++++..|.
T Consensus 240 ~~~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 240 EQGMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp HHHHHTEEEEEEEEEEEEG
T ss_pred HHHHHHhCCCCEEEEEECc
Confidence 9999999999999998863
|
| >3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=95.10 E-value=0.007 Score=56.30 Aligned_cols=81 Identities=11% Similarity=-0.007 Sum_probs=50.4
Q ss_pred hhccccccccCC--eeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCC-----------CCcccEEEecCcc---
Q 009719 143 VASFGGSMLSEN--ILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFP-----------AFSFDIVHCSRCL--- 206 (527)
Q Consensus 143 vgsfga~Ll~r~--V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFp-----------D~SFDlV~cs~~l--- 206 (527)
.|.|+.+|..++ |+++++.+... ...+.+.++|...++.. .++||+|+|....
T Consensus 36 ~G~~s~~la~~~~~V~gvD~~~~~~-----------~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~ 104 (191)
T 3dou_A 36 PGGWTQVLNSLARKIISIDLQEMEE-----------IAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVS 104 (191)
T ss_dssp TCHHHHHHTTTCSEEEEEESSCCCC-----------CTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCC
T ss_pred CCHHHHHHHHcCCcEEEEecccccc-----------CCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCCC
Confidence 566776776664 45555554311 11356777887776532 1499999986421
Q ss_pred ccc-ccC------hHHHHHHHhhcccCCcEEEEec
Q 009719 207 IPF-TAY------NATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 207 ~hw-~d~------~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
-++ .+. ...+|.++.|+|||||.|++..
T Consensus 105 g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~ 139 (191)
T 3dou_A 105 GIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQ 139 (191)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 011 111 1237899999999999999865
|
| >4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.03 E-value=0.0035 Score=65.42 Aligned_cols=119 Identities=18% Similarity=0.247 Sum_probs=63.9
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccccccc--cccCCCCCCCCCccchhhhcCc-cc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGLIGVY--HDWCEPFSTYPRTYDLIHVSGI-ES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGLiG~~--hdwce~fstYPrtyDLiHa~~~-fs 446 (527)
.+|||++||+|+|+.++....--|.. +|.. ..|..+-+ .|+-..+ .|..+.+..++..||+|.++-- |+
T Consensus 216 ~~VLDlg~GtG~~sl~~a~~ga~V~a---vDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~ 292 (393)
T 4dmg_A 216 ERVLDVYSYVGGFALRAARKGAYALA---VDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLV 292 (393)
T ss_dssp CEEEEESCTTTHHHHHHHHTTCEEEE---EESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCC
T ss_pred CeEEEcccchhHHHHHHHHcCCeEEE---EECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCC
Confidence 47999999999999888655432333 3332 33333222 2332111 2222222223544999987632 12
Q ss_pred cccCCCCCCC----CCcccccceeecccccCCcEEEEeC------CHHHHHHHHHHHhcCCceeE
Q 009719 447 LIKNPGSNKN----SCSLVDLMVEMDRMLRPEGTVVVRD------SPEVIDKVSRIANTVRWTAA 501 (527)
Q Consensus 447 ~~~~~~~~~~----rC~~~~illEmDRILRP~G~~iird------~~~~~~~i~~i~~~l~W~~~ 501 (527)
.-. ++ .-....++-++=|+|+|||++++.. ..+..+.+++.+....-+..
T Consensus 293 ~~~-----~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~ 352 (393)
T 4dmg_A 293 KRP-----EELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLR 352 (393)
T ss_dssp SSG-----GGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEE
T ss_pred CCH-----HHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEE
Confidence 100 00 0112467788889999999999653 22344556666554444443
|
| >1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 | Back alignment and structure |
|---|
Probab=94.99 E-value=0.0032 Score=62.81 Aligned_cols=88 Identities=17% Similarity=0.101 Sum_probs=54.2
Q ss_pred eeEeecCCCccchhhhccCC--C---eeEEEecCCCCCCchhHhhhc----cccc---cccccCCCCCCCCCccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSD--P---VWVMNVVPARKSSTLSVIYDR----GLIG---VYHDWCEPFSTYPRTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~---VwvMnvvp~~~~ntl~vi~eR----GLiG---~~hdwce~fstYPrtyDLiHa~ 442 (527)
.+|||+|||.|.++..|... . |..+-+- ++.+..+-++ |+-. ...|..+... -...||+|.+.
T Consensus 77 ~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s----~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~-~~~~fD~Iv~~ 151 (317)
T 1dl5_A 77 MRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYS----RKICEIAKRNVERLGIENVIFVCGDGYYGVP-EFSPYDVIFVT 151 (317)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESC----HHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCEEEEEEC
T ss_pred CEEEEecCCchHHHHHHHHhcCCCCEEEEEECC----HHHHHHHHHHHHHcCCCCeEEEECChhhccc-cCCCeEEEEEc
Confidence 48999999999999888543 1 3333221 2444444443 5421 1223332211 12679999998
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
..+... .-++-|+|+|||.+++...
T Consensus 152 ~~~~~~---------------~~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 152 VGVDEV---------------PETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp SBBSCC---------------CHHHHHHEEEEEEEEEEBC
T ss_pred CCHHHH---------------HHHHHHhcCCCcEEEEEEC
Confidence 766532 2367889999999999753
|
| >2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=94.76 E-value=0.013 Score=59.18 Aligned_cols=140 Identities=11% Similarity=0.121 Sum_probs=68.1
Q ss_pred eeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhc------cc----ccc-ccccCCCCCCCCCccchhh
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDR------GL----IGV-YHDWCEPFSTYPRTYDLIH 440 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eR------GL----iG~-~hdwce~fstYPrtyDLiH 440 (527)
-++|||+|||.|+++..|... ++-. |+-++-. .-+.++-++ |+ +-+ ..|..+.+..-+.+||+|-
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~~--v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVEK--VTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCCE--EEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCCE--EEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 478999999999999999776 3322 2222221 222222221 22 111 1111111111257899998
Q ss_pred hcCccccccCCCCCCCCCcc-cccceeecccccCCcEEEEeC-----CHHHHHHHHHHHhcCCceeEEe--cCCCCCCCC
Q 009719 441 VSGIESLIKNPGSNKNSCSL-VDLMVEMDRMLRPEGTVVVRD-----SPEVIDKVSRIANTVRWTAAVH--DKEPGSNGR 512 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~-~~illEmDRILRP~G~~iird-----~~~~~~~i~~i~~~l~W~~~~~--~~e~~~~~~ 512 (527)
++. +..+. . ..-.. ..++-++-|+|+|||.+++.. ..+.+..+.+..+.+-=.+... .....+.+.
T Consensus 187 ~d~-~~~~~----~-~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~~~~~~iP~~~~g~ 260 (314)
T 2b2c_A 187 TDS-SDPVG----P-AESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAVTYAQSIVSTYPSGS 260 (314)
T ss_dssp ECC-C------------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGE
T ss_pred EcC-CCCCC----c-chhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcceEEEEEecCcCCCc
Confidence 754 22221 0 00011 567888999999999999974 2233344444433332233222 111122122
Q ss_pred ceEEEEEec
Q 009719 513 EKILVATKS 521 (527)
Q Consensus 513 ekiLi~~K~ 521 (527)
-.+++|.|.
T Consensus 261 ~g~~~ask~ 269 (314)
T 2b2c_A 261 MGYLICAKN 269 (314)
T ss_dssp EEEEEEESS
T ss_pred eEEEEEeCC
Confidence 257888876
|
| >2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A | Back alignment and structure |
|---|
Probab=94.76 E-value=0.054 Score=53.17 Aligned_cols=129 Identities=12% Similarity=0.046 Sum_probs=66.8
Q ss_pred CeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc------cc----cccccccCCCCCCCCCccchhhh
Q 009719 373 AIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR------GL----IGVYHDWCEPFSTYPRTYDLIHV 441 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR------GL----iG~~hdwce~fstYPrtyDLiHa 441 (527)
.-++|||+|||.|+++..+...+ - .|+-++-. .-+.++-++ ++ +-+.+ ..++ .|+.+||+|=+
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~-~--~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~--~D~~-~~~~~fD~Ii~ 145 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD-T--HIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAK--QLLD-LDIKKYDLIFC 145 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS-C--EEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEES--SGGG-SCCCCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC-C--EEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEe--chHH-HHHhhCCEEEE
Confidence 34799999999999998887665 2 22222221 111211111 11 11111 1111 12377999977
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-----CHHHHHHHHHHHhcCCceeEEecCCCCC-CCCceE
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-----SPEVIDKVSRIANTVRWTAAVHDKEPGS-NGREKI 515 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-----~~~~~~~i~~i~~~l~W~~~~~~~e~~~-~~~eki 515 (527)
+. + + -...+-++-|.|+|||.+++.. ..+.+..+.+.+++.--.+... ...-| .+.-.+
T Consensus 146 d~--~---------d---p~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~-~~~vP~~g~~~~ 210 (262)
T 2cmg_A 146 LQ--E---------P---DIHRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAMPF-VAPLRILSNKGY 210 (262)
T ss_dssp SS--C---------C---CHHHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEEEE-CCTTCTTCCEEE
T ss_pred CC--C---------C---hHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceEEE-EEccCCCcccEE
Confidence 51 1 1 0226778999999999999962 2233444444334332223222 22222 233457
Q ss_pred EEEEecc
Q 009719 516 LVATKSL 522 (527)
Q Consensus 516 Li~~K~~ 522 (527)
++|.|++
T Consensus 211 ~~as~~~ 217 (262)
T 2cmg_A 211 IYASFKT 217 (262)
T ss_dssp EEEESSC
T ss_pred EEeeCCC
Confidence 7888864
|
| >2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54 | Back alignment and structure |
|---|
Probab=94.74 E-value=0.0026 Score=60.54 Aligned_cols=103 Identities=9% Similarity=0.042 Sum_probs=47.1
Q ss_pred eeeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhh----ccc---ccccc-c----cCCCCCCC-CCccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYD----RGL---IGVYH-D----WCEPFSTY-PRTYD 437 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~e----RGL---iG~~h-d----wce~fstY-PrtyD 437 (527)
-..|||+|||.|.++.+|... ..- |+-+|-. ..+..+-+ .|+ +-+++ | +-+++... +.+||
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWY---FLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYD 142 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCE---EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBS
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCe---EEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCccc
Confidence 347999999999998877543 222 2222222 33333322 244 22222 2 22233211 15899
Q ss_pred hhhhcCcccccc-CCCC-----CCCCCcccccceeecccccCCcEEEE
Q 009719 438 LIHVSGIESLIK-NPGS-----NKNSCSLVDLMVEMDRMLRPEGTVVV 479 (527)
Q Consensus 438 LiHa~~~fs~~~-~~~~-----~~~rC~~~~illEmDRILRP~G~~ii 479 (527)
+|-++--|.... .... .........++-|+-|+|+|||.+.+
T Consensus 143 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 143 FCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp EEEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred EEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 999875443211 0000 00001112455688888888886644
|
| >1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A* | Back alignment and structure |
|---|
Probab=94.73 E-value=0.005 Score=63.19 Aligned_cols=121 Identities=17% Similarity=0.204 Sum_probs=65.6
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----ccc--cccc-ccCCCCCCC---CCccchhhhc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLI--GVYH-DWCEPFSTY---PRTYDLIHVS 442 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLi--G~~h-dwce~fstY---PrtyDLiHa~ 442 (527)
=.+|||++||.|+|+.++... .-+|+-+|.. ..+..+-+. |+- -+++ |..+.+... +.+||+|-++
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 368999999999999888765 2344444433 333333222 331 1111 111111111 4689999875
Q ss_pred CccccccCCCCCCCC----CcccccceeecccccCCcEEEEeCC-----HH-HHHHHHHHHhcCCceeE
Q 009719 443 GIESLIKNPGSNKNS----CSLVDLMVEMDRMLRPEGTVVVRDS-----PE-VIDKVSRIANTVRWTAA 501 (527)
Q Consensus 443 ~~fs~~~~~~~~~~r----C~~~~illEmDRILRP~G~~iird~-----~~-~~~~i~~i~~~l~W~~~ 501 (527)
--..... .+.. -....++.++-|+|+|||.+++... .+ ..+.+++.+.....+..
T Consensus 287 pP~~~~~----~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~ 351 (382)
T 1wxx_A 287 PPAFAKG----KKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLR 351 (382)
T ss_dssp CCCSCCS----TTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCCC----hhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 3221110 0000 1124688889999999999999842 22 34555555555554443
|
| >1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A* | Back alignment and structure |
|---|
Probab=94.71 E-value=0.0066 Score=60.90 Aligned_cols=144 Identities=12% Similarity=0.054 Sum_probs=71.4
Q ss_pred eeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhh------cc-c----ccc-ccccCCCCCCCCCccchh
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD------RG-L----IGV-YHDWCEPFSTYPRTYDLI 439 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e------RG-L----iG~-~hdwce~fstYPrtyDLi 439 (527)
-++|||+|||.|+++..|.+. ++-- |+-++-. .-+.++-+ .| + +-+ ..|-.+.....+.+||+|
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~--v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEK--AVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCE--EEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCE--EEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 479999999999999999876 3321 1112211 22222211 11 1 111 111111111125789999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC------CHHHHHHHHHHHhcCCceeEEec--CCCCCCC
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD------SPEVIDKVSRIANTVRWTAAVHD--KEPGSNG 511 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird------~~~~~~~i~~i~~~l~W~~~~~~--~e~~~~~ 511 (527)
-++... .+.. ......--...++-++-|+|+|||.+++.. ..+.+..+.+..+..--.+.... ...+ .+
T Consensus 156 i~d~~~-~~~~-~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~~-~g 232 (314)
T 1uir_A 156 IIDLTD-PVGE-DNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSYKNHIPGF-FL 232 (314)
T ss_dssp EEECCC-CBST-TCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEEEEEEGGG-TE
T ss_pred EECCCC-cccc-cCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEEEEecCCC-CC
Confidence 987432 2200 000000002467889999999999999872 22344555554444433332211 1111 22
Q ss_pred CceEEEEEecc
Q 009719 512 REKILVATKSL 522 (527)
Q Consensus 512 ~ekiLi~~K~~ 522 (527)
...+++|.|++
T Consensus 233 ~~~~~~as~~~ 243 (314)
T 1uir_A 233 NFGFLLASDAF 243 (314)
T ss_dssp EEEEEEEESSS
T ss_pred eEEEEEEECCC
Confidence 34578888863
|
| >1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A | Back alignment and structure |
|---|
Probab=94.61 E-value=0.014 Score=60.99 Aligned_cols=104 Identities=22% Similarity=0.278 Sum_probs=54.0
Q ss_pred eeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhhc----cc-cccc-cccCCCCCCCC-CccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYDR----GL-IGVY-HDWCEPFSTYP-RTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~eR----GL-iG~~-hdwce~fstYP-rtyDLiHa~~~ 444 (527)
.+|||+|||.|+++..|.+. +. .|+-.|.. ..+..+-++ |+ +-+. .|..+.-..++ ..||+|-++--
T Consensus 248 ~~VLDlgaG~G~~t~~la~~~~~~---~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~P 324 (429)
T 1sqg_A 248 EHILDLCAAPGGKTTHILEVAPEA---QVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAP 324 (429)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTTC---EEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECC
T ss_pred CeEEEECCCchHHHHHHHHHcCCC---EEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCC
Confidence 47999999999998887542 11 22222322 444544443 54 1111 12211100133 68999985422
Q ss_pred cccc----cCCCC--CCCCCcc-------cccceeecccccCCcEEEEeC
Q 009719 445 ESLI----KNPGS--NKNSCSL-------VDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 445 fs~~----~~~~~--~~~rC~~-------~~illEmDRILRP~G~~iird 481 (527)
.|.. ..|.. ....-++ ..+|-++-++|+|||.+++.+
T Consensus 325 csg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst 374 (429)
T 1sqg_A 325 CSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 374 (429)
T ss_dssp CCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 2110 00000 0000111 256888999999999999975
|
| >2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A* | Back alignment and structure |
|---|
Probab=94.58 E-value=0.05 Score=57.18 Aligned_cols=85 Identities=20% Similarity=0.281 Sum_probs=56.5
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLI 218 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~ 218 (527)
+|.|+..|...+..+..+ |.++.+++.|+++ ++.+.+..+|+..++.. +||+|++.--.. .....++.
T Consensus 301 ~G~~sl~la~~~~~V~gv---D~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~--~fD~Vv~dPPr~---g~~~~~~~ 372 (425)
T 2jjq_A 301 VGTFGIYLAKRGFNVKGF---DSNEFAIEMARRNVEINNVDAEFEVASDREVSVK--GFDTVIVDPPRA---GLHPRLVK 372 (425)
T ss_dssp TTHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCT--TCSEEEECCCTT---CSCHHHHH
T ss_pred chHHHHHHHHcCCEEEEE---ECCHHHHHHHHHHHHHcCCcEEEEECChHHcCcc--CCCEEEEcCCcc---chHHHHHH
Confidence 677777777665433333 7778888888654 55566788888877532 899999864321 12222455
Q ss_pred HHhhcccCCcEEEEecCC
Q 009719 219 EVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 219 Ei~RVLRPGG~lviS~pp 236 (527)
.+ +.|+|||.+++|..|
T Consensus 373 ~l-~~l~p~givyvsc~p 389 (425)
T 2jjq_A 373 RL-NREKPGVIVYVSCNP 389 (425)
T ss_dssp HH-HHHCCSEEEEEESCH
T ss_pred HH-HhcCCCcEEEEECCh
Confidence 54 569999999999754
|
| >1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24 | Back alignment and structure |
|---|
Probab=94.56 E-value=0.00028 Score=67.81 Aligned_cols=88 Identities=10% Similarity=0.018 Sum_probs=55.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC---CCcEEeeccccCCCCCC-CcccEEEecC-----------ccc
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG---IPAFVAMLGTRRLPFPA-FSFDIVHCSR-----------CLI 207 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg---~pa~~~v~dae~LPFpD-~SFDlV~cs~-----------~l~ 207 (527)
.|.++..|..++.. +...|.++.+++.|+++. ..+.+..+|+..+|+++ ++| .|+++. .+.
T Consensus 40 ~G~~~~~l~~~~~~---v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py~~~~~~~~~~~~ 115 (245)
T 1yub_A 40 KGHLTTKLAKISKQ---VTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY-KIVGNIPYHLSTQIIKKVVF 115 (245)
T ss_dssp CSSCSHHHHHHSSE---EEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE-EEEEECCSSSCHHHHHHHHH
T ss_pred CCHHHHHHHHhCCe---EEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc-EEEEeCCccccHHHHHHHHh
Confidence 45555556665533 333366666666665542 13567788999999984 799 666652 123
Q ss_pred ccccChHHHH----HHHhhcccCCcEEEEecC
Q 009719 208 PFTAYNATYL----IEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 208 hw~d~~~~aL----~Ei~RVLRPGG~lviS~p 235 (527)
|+..... ++ .++.|+|||||.|.+..+
T Consensus 116 ~~~~~~~-~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 116 ESRASDI-YLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp HCCCEEE-EEEEESSHHHHHHCGGGSHHHHTT
T ss_pred CCCCCeE-EEEeeHHHHHHHhCCCCchhhhhe
Confidence 3333333 55 669999999999888765
|
| >1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31 | Back alignment and structure |
|---|
Probab=94.54 E-value=0.0079 Score=63.86 Aligned_cols=106 Identities=8% Similarity=0.093 Sum_probs=59.0
Q ss_pred HHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCC-C---eeEEEecCCCCCCchhHh-------h----hccc-cc-
Q 009719 358 VAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSD-P---VWVMNVVPARKSSTLSVI-------Y----DRGL-IG- 420 (527)
Q Consensus 358 v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~-~---VwvMnvvp~~~~ntl~vi-------~----eRGL-iG- 420 (527)
|....+.+. +.. -..|||+|||.|.+++.|... + |+-+-+.+ ..+.++ - ..|+ ++
T Consensus 231 v~~ml~~l~--l~~--g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~----~~l~~A~~Ml~~ar~~~~~~Gl~~~n 302 (433)
T 1u2z_A 231 LSDVYQQCQ--LKK--GDTFMDLGSGVGNCVVQAALECGCALSFGCEIMD----DASDLTILQYEELKKRCKLYGMRLNN 302 (433)
T ss_dssp HHHHHHHTT--CCT--TCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCH----HHHHHHHHHHHHHHHHHHHTTBCCCC
T ss_pred HHHHHHhcC--CCC--CCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCH----HHHHHHHHhHHHHHHHHHHcCCCCCc
Confidence 444444443 333 357999999999999888653 2 44333322 222222 2 2342 11
Q ss_pred --ccc--ccCCC--CCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 421 --VYH--DWCEP--FSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 421 --~~h--dwce~--fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+.+ ++.+. |..-..+||+|-++..+ +. =++...|-||-|+|+|||.+|+.+
T Consensus 303 V~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l--~~--------~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 303 VEFSLKKSFVDNNRVAELIPQCDVILVNNFL--FD--------EDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp EEEEESSCSTTCHHHHHHGGGCSEEEECCTT--CC--------HHHHHHHHHHHTTCCTTCEEEESS
T ss_pred eEEEEcCccccccccccccCCCCEEEEeCcc--cc--------ccHHHHHHHHHHhCCCCeEEEEee
Confidence 111 11111 11113679999875332 10 023456789999999999999985
|
| >2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A* | Back alignment and structure |
|---|
Probab=94.47 E-value=0.011 Score=59.15 Aligned_cols=143 Identities=14% Similarity=0.175 Sum_probs=69.9
Q ss_pred CeeeEeecCCCccchhhhccCCC-eeEEEecCCCCCCchhHhhh------ccc----cccc-cccCCCCCCCCCccchhh
Q 009719 373 AIRNIMDMNAFFGGFAAALTSDP-VWVMNVVPARKSSTLSVIYD------RGL----IGVY-HDWCEPFSTYPRTYDLIH 440 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~~-VwvMnvvp~~~~ntl~vi~e------RGL----iG~~-hdwce~fstYPrtyDLiH 440 (527)
.-++|||+|||.|+++..|.+.+ +-.+-.|=.+ +.-+.++-+ .|+ +-++ .|-.+.+...+.+||+|-
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid-~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEID-EDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESC-HHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECC-HHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 34799999999999999998763 3222111111 122222221 122 1111 111111122357899999
Q ss_pred hcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-----CHHHHHHHHHHHhcCCceeEEe--cCCCCCCCCc
Q 009719 441 VSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-----SPEVIDKVSRIANTVRWTAAVH--DKEPGSNGRE 513 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-----~~~~~~~i~~i~~~l~W~~~~~--~~e~~~~~~e 513 (527)
++.. ..+. | ...-....++-++-|+|+|||.+++.. ..+.+..+.+..+.+-=.+... .....+.+.-
T Consensus 174 ~d~~-~~~~-~---~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~~g~~ 248 (304)
T 2o07_A 174 TDSS-DPMG-P---AESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQI 248 (304)
T ss_dssp EECC----------------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEE
T ss_pred ECCC-CCCC-c---chhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCCceeEEEEeccccCcce
Confidence 8632 2111 0 000011457788899999999999974 2334444444433332222221 1112222234
Q ss_pred eEEEEEec
Q 009719 514 KILVATKS 521 (527)
Q Consensus 514 kiLi~~K~ 521 (527)
.+++|.|.
T Consensus 249 g~~~as~~ 256 (304)
T 2o07_A 249 GFMLCSKN 256 (304)
T ss_dssp EEEEEESS
T ss_pred EEEEEeCC
Confidence 57788875
|
| >1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11 | Back alignment and structure |
|---|
Probab=94.40 E-value=0.063 Score=54.11 Aligned_cols=91 Identities=18% Similarity=0.222 Sum_probs=54.5
Q ss_pred EEeecccc-CCC-CCCCcccEEEec--Cccc---cc--------ccChHHHHHHHhhcccCCcEEEEecCCCCCCCc---
Q 009719 181 FVAMLGTR-RLP-FPAFSFDIVHCS--RCLI---PF--------TAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQ--- 242 (527)
Q Consensus 181 ~~~v~dae-~LP-FpD~SFDlV~cs--~~l~---hw--------~d~~~~aL~Ei~RVLRPGG~lviS~pp~~~~~~--- 242 (527)
.+..+|+. .|. +++++||+|+++ +... +| .......|.|+.|||||||.+++.....+..+.
T Consensus 16 ~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~~ 95 (323)
T 1boo_A 16 SMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPAR 95 (323)
T ss_dssp EEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEEEE
T ss_pred eEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCccc
Confidence 45556653 354 678999999988 2111 11 112334899999999999999997653211111
Q ss_pred -hhHHHHHHHHHHhcceEEeeeecceEEEeCCCc
Q 009719 243 -DKEWADLQAVARALCYELIAVDGNTVIWKKPVG 275 (527)
Q Consensus 243 -~~~w~~i~~l~~~mcW~~~~~~~~v~iwrKp~~ 275 (527)
...+..+.++.+..-|+.. +.-||+|+..
T Consensus 96 ~~~~~~~i~~~~~~~Gf~~~----~~iiW~k~~~ 125 (323)
T 1boo_A 96 SIYNFRVLIRMIDEVGFFLA----EDFYWFNPSK 125 (323)
T ss_dssp CCHHHHHHHHHHHTTCCEEE----EEEEEECSSC
T ss_pred ccchHHHHHHHHHhCCCEEE----EEEEEecCCC
Confidence 1234444445555557655 3458988753
|
| >1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32 | Back alignment and structure |
|---|
Probab=94.39 E-value=0.011 Score=54.12 Aligned_cols=107 Identities=12% Similarity=-0.028 Sum_probs=57.5
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc--cccccccccCCCCCCCCCccchhhhcCccccccCC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR--GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNP 451 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR--GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~ 451 (527)
.+|||+|||.|.|+.+|...+.- .|+-+|.. ..+..+-++ .+--+..|. ..+|.+||+|-++..|..+.
T Consensus 53 ~~vlD~gcG~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~d~----~~~~~~~D~v~~~~p~~~~~-- 124 (200)
T 1ne2_A 53 RSVIDAGTGNGILACGSYLLGAE--SVTAFDIDPDAIETAKRNCGGVNFMVADV----SEISGKYDTWIMNPPFGSVV-- 124 (200)
T ss_dssp SEEEEETCTTCHHHHHHHHTTBS--EEEEEESCHHHHHHHHHHCTTSEEEECCG----GGCCCCEEEEEECCCC------
T ss_pred CEEEEEeCCccHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhcCCCEEEECcH----HHCCCCeeEEEECCCchhcc--
Confidence 58999999999999988766431 12222222 334433333 221111222 22468999999988877653
Q ss_pred CCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCC
Q 009719 452 GSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVR 497 (527)
Q Consensus 452 ~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~ 497 (527)
+. ....++-++=|+| |.+++..+......+.+++....
T Consensus 125 ----~~-~~~~~l~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~g 162 (200)
T 1ne2_A 125 ----KH-SDRAFIDKAFETS---MWIYSIGNAKARDFLRREFSARG 162 (200)
T ss_dssp --------CHHHHHHHHHHE---EEEEEEEEGGGHHHHHHHHHHHE
T ss_pred ----Cc-hhHHHHHHHHHhc---CcEEEEEcCchHHHHHHHHHHCC
Confidence 11 1134565666666 44544444455566666655543
|
| >3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=94.30 E-value=0.01 Score=57.13 Aligned_cols=128 Identities=9% Similarity=0.072 Sum_probs=80.6
Q ss_pred eeeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhhc----cccc-cccccCCCC-CCCCCccchhhhcCc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYDR----GLIG-VYHDWCEPF-STYPRTYDLIHVSGI 444 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~eR----GLiG-~~hdwce~f-stYPrtyDLiHa~~~ 444 (527)
-.+|||+|||+|.+|.++... .+ .+.-+|-. .-+.++-++ |+-+ +-+ +... ...|-+||+|=+..+
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a---~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~ 124 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKI---IYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKM 124 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCC---EEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETC
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCC---EEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhH
Confidence 569999999999999999555 33 34444444 334433332 3321 111 2221 134678998766655
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-----------HHHHHHHHHHHhcCCceeEEecCCCCCCCCc
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-----------PEVIDKVSRIANTVRWTAAVHDKEPGSNGRE 513 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-----------~~~~~~i~~i~~~l~W~~~~~~~e~~~~~~e 513 (527)
+-+..+ . ...+..+=+.|||||.||--+. ..+-...++.+..=-|.+..... +.|
T Consensus 125 LHlL~~---~------~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~~~~~~-----~nE 190 (200)
T 3fzg_A 125 LPVLKQ---Q------DVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKVI-----GNE 190 (200)
T ss_dssp HHHHHH---T------TCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEEEEEEE-----TTE
T ss_pred HHhhhh---h------HHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcceeeeeeee-----Cce
Confidence 544431 1 3356688899999999998861 33667788888888888766533 356
Q ss_pred eEEEEEe
Q 009719 514 KILVATK 520 (527)
Q Consensus 514 kiLi~~K 520 (527)
-+.|.+|
T Consensus 191 l~y~~~~ 197 (200)
T 3fzg_A 191 LVYITSG 197 (200)
T ss_dssp EEEEECC
T ss_pred EEEEEec
Confidence 6766665
|
| >1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A | Back alignment and structure |
|---|
Probab=94.27 E-value=0.0062 Score=58.80 Aligned_cols=86 Identities=14% Similarity=0.109 Sum_probs=53.8
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC---CCcEEeeccccCCCCCC-CcccEEEecC-----------ccc
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG---IPAFVAMLGTRRLPFPA-FSFDIVHCSR-----------CLI 207 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg---~pa~~~v~dae~LPFpD-~SFDlV~cs~-----------~l~ 207 (527)
.|.++..|+.++..+..+ |.++.+++.|+++. ....+..+|+..+|+++ ..|+ |+++. .+.
T Consensus 41 ~G~lt~~l~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-vv~nlPy~~~~~~l~~~l~ 116 (244)
T 1qam_A 41 KGHFTLELVQRCNFVTAI---EIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSYK-IFGNIPYNISTDIIRKIVF 116 (244)
T ss_dssp TSHHHHHHHHHSSEEEEE---CSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCCE-EEEECCGGGHHHHHHHHHH
T ss_pred chHHHHHHHHcCCeEEEE---ECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCCeE-EEEeCCcccCHHHHHHHHh
Confidence 456666677766443333 77889999998763 23567889999999985 5664 45432 222
Q ss_pred ccccChHHHH---HH-HhhcccCCcEEEEe
Q 009719 208 PFTAYNATYL---IE-VDRLLRPGGYLVIS 233 (527)
Q Consensus 208 hw~d~~~~aL---~E-i~RVLRPGG~lviS 233 (527)
|+..... ++ +| +.|+|+|||.+.+.
T Consensus 117 ~~~~~~~-~lm~q~e~a~rll~~~G~l~v~ 145 (244)
T 1qam_A 117 DSIADEI-YLIVEYGFAKRLLNTKRSLALF 145 (244)
T ss_dssp SCCCSEE-EEEEEHHHHHHHTCTTSHHHHH
T ss_pred cCCCCeE-EEEEEHHHHHHHhcCCcchhHH
Confidence 3322222 34 35 78888888765544
|
| >2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51 | Back alignment and structure |
|---|
Probab=94.25 E-value=0.0079 Score=61.86 Aligned_cols=120 Identities=10% Similarity=0.133 Sum_probs=63.9
Q ss_pred eeEeecCCCccchhhhccCCCe-eEEEecCCCCCCchhHhh----hcccc---ccc-cccCCCCCCC---CCccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKSSTLSVIY----DRGLI---GVY-HDWCEPFSTY---PRTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~ntl~vi~----eRGLi---G~~-hdwce~fstY---PrtyDLiHa~ 442 (527)
.+|||++||.|+|+.+|...+. -|..|=.. +..+..+- ..|+- -.+ .|..+.+..+ ..+||+|-++
T Consensus 219 ~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s--~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 219 DRVLDVFTYTGGFAIHAAIAGADEVIGIDKS--PRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp CEEEETTCTTTHHHHHHHHTTCSEEEEEESC--HHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CeEEEecCCCCHHHHHHHHCCCCEEEEEeCC--HHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 5899999999999988876532 23222211 12222221 12321 111 1111111111 3579999885
Q ss_pred CccccccCCCCCCCC-------CcccccceeecccccCCcEEEEeCC-----HH-HHHHHHHHHhcCCceeEEe
Q 009719 443 GIESLIKNPGSNKNS-------CSLVDLMVEMDRMLRPEGTVVVRDS-----PE-VIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 443 ~~fs~~~~~~~~~~r-------C~~~~illEmDRILRP~G~~iird~-----~~-~~~~i~~i~~~l~W~~~~~ 503 (527)
--+.. ..+ -....++.++=|+|+|||.+++... .+ ..+.+++.+.....+..+.
T Consensus 297 pP~~~-------~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i 363 (396)
T 2as0_A 297 PPAFV-------QHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAKAGKFLKML 363 (396)
T ss_dssp CCCSC-------SSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTEEEEES
T ss_pred CCCCC-------CCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 32210 011 1235688899999999999888742 22 3444555565555555544
|
| >4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.18 E-value=0.065 Score=55.78 Aligned_cols=77 Identities=13% Similarity=0.175 Sum_probs=50.1
Q ss_pred CCeeEEeeccCcChHHHHHHHHHcCCC--cEEeeccccCCCCCCCcccEEEec---CcccccccChHHHHHHHhhcccCC
Q 009719 153 ENILTLSFAPRDSHKAQIQFALERGIP--AFVAMLGTRRLPFPAFSFDIVHCS---RCLIPFTAYNATYLIEVDRLLRPG 227 (527)
Q Consensus 153 r~V~~msiAp~D~seaqvq~A~eRg~p--a~~~v~dae~LPFpD~SFDlV~cs---~~l~hw~d~~~~aL~Ei~RVLRPG 227 (527)
+.|.+++.++ ..+...+.+++.|.. +.+..++++.+.+| +.||+|+|- .++.+ ......++...+|.||||
T Consensus 107 ~~V~ave~s~--~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~l~~-e~~l~~~l~a~~r~Lkp~ 182 (376)
T 4hc4_A 107 RRVYAVEASA--IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGYGLLH-ESMLSSVLHARTKWLKEG 182 (376)
T ss_dssp SEEEEEECST--THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBTTBTT-TCSHHHHHHHHHHHEEEE
T ss_pred CEEEEEeChH--HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccccccc-cchhhhHHHHHHhhCCCC
Confidence 3466666543 222223344455654 56677888898888 679999983 34433 223344888899999999
Q ss_pred cEEEEe
Q 009719 228 GYLVIS 233 (527)
Q Consensus 228 G~lviS 233 (527)
|.++-+
T Consensus 183 G~~iP~ 188 (376)
T 4hc4_A 183 GLLLPA 188 (376)
T ss_dssp EEEESC
T ss_pred ceECCc
Confidence 999854
|
| >2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A* | Back alignment and structure |
|---|
Probab=94.03 E-value=0.018 Score=56.81 Aligned_cols=142 Identities=17% Similarity=0.142 Sum_probs=69.8
Q ss_pred CeeeEeecCCCccchhhhccCCC-eeEEEecCCCCC-CchhHhhhc------cc----cc-cccccCCCCCCCCCccchh
Q 009719 373 AIRNIMDMNAFFGGFAAALTSDP-VWVMNVVPARKS-STLSVIYDR------GL----IG-VYHDWCEPFSTYPRTYDLI 439 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~~-VwvMnvvp~~~~-ntl~vi~eR------GL----iG-~~hdwce~fstYPrtyDLi 439 (527)
.-++|||+|||.|+++..+.+.+ +-- |+-++-. .-+.++-++ |+ +- +..|-.+.....+.+||+|
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~--v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVEN--IDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 155 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCE--EEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCE--EEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence 34799999999999999997663 321 1112211 222222111 01 00 1111111111126789999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-----HHHHHHHHHHHhcCCceeEEe--cCCCCCCCC
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-----PEVIDKVSRIANTVRWTAAVH--DKEPGSNGR 512 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-----~~~~~~i~~i~~~l~W~~~~~--~~e~~~~~~ 512 (527)
-++.. ..+. ....---..++-++-|+|+|||.+++... .+.+..+.+.+++.--.+... .....+.+.
T Consensus 156 i~d~~-~~~~----~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~y~~g~ 230 (283)
T 2i7c_A 156 IVDSS-DPIG----PAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGC 230 (283)
T ss_dssp EEECC-CTTT----GGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGE
T ss_pred EEcCC-CCCC----cchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCCceEEEEEEcCCcCCCc
Confidence 88632 2221 00000004677889999999999999842 233444444333332233222 122222222
Q ss_pred ceEEEEEec
Q 009719 513 EKILVATKS 521 (527)
Q Consensus 513 ekiLi~~K~ 521 (527)
-.+++|.|+
T Consensus 231 ~g~~~~s~~ 239 (283)
T 2i7c_A 231 IGILCCSKT 239 (283)
T ss_dssp EEEEEEESS
T ss_pred EEEEEEeCC
Confidence 356777765
|
| >3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=93.97 E-value=0.018 Score=58.76 Aligned_cols=142 Identities=14% Similarity=0.121 Sum_probs=70.3
Q ss_pred eeeEeecCCCccchhhhccC-CC-eeEEEecCCCCCCchhHhhhc-cc-----ccc-ccccCCCCCCCC-CccchhhhcC
Q 009719 374 IRNIMDMNAFFGGFAAALTS-DP-VWVMNVVPARKSSTLSVIYDR-GL-----IGV-YHDWCEPFSTYP-RTYDLIHVSG 443 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~-~~-VwvMnvvp~~~~ntl~vi~eR-GL-----iG~-~hdwce~fstYP-rtyDLiHa~~ 443 (527)
-.+|||+|||.|+++..|.+ .| + -+-+|=.+. .-+.++-++ ++ +-+ ..|-.+-...++ .+||+|-++
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~-~v~~VEidp-~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D- 166 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQS-RNTVVELDA-ELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRD- 166 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTC-EEEEEESCH-HHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEEC-
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCc-EEEEEECCH-HHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEEC-
Confidence 34899999999999999876 33 3 222221111 111211111 00 001 111111111233 789999875
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC----HHHHHH-HHHHHhcCCceeEEe-cCC--CCCCCCceE
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS----PEVIDK-VSRIANTVRWTAAVH-DKE--PGSNGREKI 515 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~----~~~~~~-i~~i~~~l~W~~~~~-~~e--~~~~~~eki 515 (527)
+|..+. ....-.-..++-++-|+|+|||.+++.-. .+.+.. ++.+.+.+. .+.+. +.. .+.....-|
T Consensus 167 ~~~~~~----~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~-~v~~~~~~~~~~g~~~gN~V 241 (317)
T 3gjy_A 167 VFAGAI----TPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFE-HVAVIADPPMLKGRRYGNII 241 (317)
T ss_dssp CSTTSC----CCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCS-EEEEEECHHHHTTSSCEEEE
T ss_pred CCCccc----cchhhhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCC-ceEEEEecCCCCCCcCceEE
Confidence 343321 00111114677889999999999998732 122222 223333332 23332 211 122334678
Q ss_pred EEEEeccC
Q 009719 516 LVATKSLW 523 (527)
Q Consensus 516 Li~~K~~w 523 (527)
|+|.|.-.
T Consensus 242 l~As~~pl 249 (317)
T 3gjy_A 242 LMGSDTEF 249 (317)
T ss_dssp EEEESSCC
T ss_pred EEEECCCC
Confidence 99988754
|
| >2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A* | Back alignment and structure |
|---|
Probab=93.95 E-value=0.018 Score=59.48 Aligned_cols=137 Identities=12% Similarity=0.125 Sum_probs=70.0
Q ss_pred eeEeecCCCccchhhhccCCCe-eEEEecCCCCCCchhHhh----hccccc----cc-cccCCCCCCC---CCccchhhh
Q 009719 375 RNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKSSTLSVIY----DRGLIG----VY-HDWCEPFSTY---PRTYDLIHV 441 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~ntl~vi~----eRGLiG----~~-hdwce~fstY---PrtyDLiHa 441 (527)
.+|||++||+|+|+.++..... -|..|=.. +..+..+- ..|+-+ .+ .|.-+.++.. ..+||+|-+
T Consensus 214 ~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s--~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~ 291 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGGAMATTSVDLA--KRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIII 291 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTTBSEEEEEESC--TTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEEeeccCHHHHHHHHCCCCEEEEEECC--HHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEE
Confidence 4799999999999988866432 23322211 12222221 123321 11 1111101111 247999877
Q ss_pred cCccccccCCCCCCCCCc------ccccceeecccccCCcEEEEeCC------HHHHHHHHHHHhcCCceeEEe-----c
Q 009719 442 SGIESLIKNPGSNKNSCS------LVDLMVEMDRMLRPEGTVVVRDS------PEVIDKVSRIANTVRWTAAVH-----D 504 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~------~~~illEmDRILRP~G~~iird~------~~~~~~i~~i~~~l~W~~~~~-----~ 504 (527)
+--... .+..+. +..++-+.-|+|+|||.+++... ....+.+++.+....++.... |
T Consensus 292 DPP~~~------~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~D 365 (385)
T 2b78_A 292 DPPSFA------RNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHTYLDLQQLPSD 365 (385)
T ss_dssp CCCCC-----------CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCEEEEEECCCTT
T ss_pred CCCCCC------CChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCcEEEeCCCCCC
Confidence 532210 001111 12356667899999999999852 234556777777777762211 4
Q ss_pred CCCCCCCCc----eEEEEE
Q 009719 505 KEPGSNGRE----KILVAT 519 (527)
Q Consensus 505 ~e~~~~~~e----kiLi~~ 519 (527)
|.-.+..+| |.++++
T Consensus 366 ~p~~~~~~e~~yLk~~~~~ 384 (385)
T 2b78_A 366 FAVNVQDESSNYLKVFTIK 384 (385)
T ss_dssp SCCCTTCGGGCCCEEEEEE
T ss_pred CCCCCCCCCCCCceEEEEE
Confidence 433333445 666654
|
| >2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45 | Back alignment and structure |
|---|
Probab=93.73 E-value=0.03 Score=56.38 Aligned_cols=148 Identities=10% Similarity=0.064 Sum_probs=76.4
Q ss_pred CCCeeeEeecCCCccchhhhccCCCe----eEEEecCCCCC-CchhHhhh----ccc-cccccccCCCCCCCC-Cccchh
Q 009719 371 TPAIRNIMDMNAFFGGFAAALTSDPV----WVMNVVPARKS-STLSVIYD----RGL-IGVYHDWCEPFSTYP-RTYDLI 439 (527)
Q Consensus 371 ~~~iRnvmDm~ag~GgFaAaL~~~~V----wvMnvvp~~~~-ntl~vi~e----RGL-iG~~hdwce~fstYP-rtyDLi 439 (527)
...-..|+|.+||.|+|+.++.+.-- =-.+|.=.+-. .++.++-. +|+ +-+++ ...+...+ ..||+|
T Consensus 128 ~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~--~D~l~~~~~~~fD~I 205 (344)
T 2f8l_A 128 KKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLH--QDGLANLLVDPVDVV 205 (344)
T ss_dssp TCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEE--SCTTSCCCCCCEEEE
T ss_pred CCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEE--CCCCCccccCCccEE
Confidence 34567899999999999877743210 00122222222 33333322 354 12221 22333333 789999
Q ss_pred hhcCccccccC--------CCCCCCCCc-cc-ccceeecccccCCcEEEEeC-----CHHHHHHHHHHHhcCCceeEEec
Q 009719 440 HVSGIESLIKN--------PGSNKNSCS-LV-DLMVEMDRMLRPEGTVVVRD-----SPEVIDKVSRIANTVRWTAAVHD 504 (527)
Q Consensus 440 Ha~~~fs~~~~--------~~~~~~rC~-~~-~illEmDRILRP~G~~iird-----~~~~~~~i~~i~~~l~W~~~~~~ 504 (527)
-++--|..+.. +.. .++.. .. .++.++-+.|+|||.+++-- ..+.-.++++.+..-.|-..+.+
T Consensus 206 i~NPPfg~~~~~~~~~~~~~~~-~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~~~~ii~ 284 (344)
T 2f8l_A 206 ISDLPVGYYPDDENAKTFELCR-EEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIK 284 (344)
T ss_dssp EEECCCSEESCHHHHTTSTTCC-SSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEEEEEEEE
T ss_pred EECCCCCCcCchhhhhhccccC-CCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCeEEEeee
Confidence 99877754420 000 01111 11 35778889999999987753 11223566665544445332222
Q ss_pred CC----CCCCCCceEEEEEec
Q 009719 505 KE----PGSNGREKILVATKS 521 (527)
Q Consensus 505 ~e----~~~~~~ekiLi~~K~ 521 (527)
.. .+.....-|+|.+|+
T Consensus 285 lp~~~F~~~~~~~~i~vl~k~ 305 (344)
T 2f8l_A 285 LPETLFKSEQARKSILILEKA 305 (344)
T ss_dssp CCGGGSCC-CCCEEEEEEEEC
T ss_pred CChhhccCCCCceEEEEEECC
Confidence 11 122345567777764
|
| >3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A* | Back alignment and structure |
|---|
Probab=93.67 E-value=0.046 Score=54.65 Aligned_cols=136 Identities=13% Similarity=0.117 Sum_probs=75.0
Q ss_pred CccccchhhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCC-eeEEEecCCCC-CCchhHhh----hc
Q 009719 343 GYDVFEADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDP-VWVMNVVPARK-SSTLSVIY----DR 416 (527)
Q Consensus 343 ~~~~f~~d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~-VwvMnvvp~~~-~ntl~vi~----eR 416 (527)
+.-.|..+....+.++.++ ++.| ..|+||+||+|+|+-.+.... .-|.. .|- +..+..+- .-
T Consensus 104 ~k~~f~~~~~~er~ri~~~-------~~~g--~~VlD~~aG~G~~~i~~a~~g~~~V~a---vD~np~a~~~~~~N~~~N 171 (278)
T 3k6r_A 104 AKIMFSPANVKERVRMAKV-------AKPD--ELVVDMFAGIGHLSLPIAVYGKAKVIA---IEKDPYTFKFLVENIHLN 171 (278)
T ss_dssp TTSCCCGGGHHHHHHHHHH-------CCTT--CEEEETTCTTTTTTHHHHHHTCCEEEE---ECCCHHHHHHHHHHHHHT
T ss_pred cceEEcCCcHHHHHHHHHh-------cCCC--CEEEEecCcCcHHHHHHHHhcCCeEEE---EECCHHHHHHHHHHHHHc
Confidence 3345777878777776543 3344 479999999999985543332 22222 222 13233222 22
Q ss_pred cccccccccCCCCCCCC--CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-------CHHHHH
Q 009719 417 GLIGVYHDWCEPFSTYP--RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-------SPEVID 487 (527)
Q Consensus 417 GLiG~~hdwce~fstYP--rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-------~~~~~~ 487 (527)
|+-+...-.+.-...++ ..||.|-.+-..+. ...|=+.=++|+|||++.+-+ ..+..+
T Consensus 172 ~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p~~~-------------~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e 238 (278)
T 3k6r_A 172 KVEDRMSAYNMDNRDFPGENIADRILMGYVVRT-------------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFE 238 (278)
T ss_dssp TCTTTEEEECSCTTTCCCCSCEEEEEECCCSSG-------------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHH
T ss_pred CCCCcEEEEeCcHHHhccccCCCEEEECCCCcH-------------HHHHHHHHHHcCCCCEEEEEeeecccccchhHHH
Confidence 44221111111111223 57887655432221 234444558999999987753 233577
Q ss_pred HHHHHHhcCCceeEEe
Q 009719 488 KVSRIANTVRWTAAVH 503 (527)
Q Consensus 488 ~i~~i~~~l~W~~~~~ 503 (527)
.++++++...+++...
T Consensus 239 ~i~~~~~~~g~~v~~~ 254 (278)
T 3k6r_A 239 TFKRITKEYGYDVEKL 254 (278)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHcCCcEEEE
Confidence 8888999888887654
|
| >4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A* | Back alignment and structure |
|---|
Probab=93.65 E-value=0.06 Score=59.86 Aligned_cols=126 Identities=18% Similarity=0.203 Sum_probs=73.7
Q ss_pred ccCccccchhhHHH---HHHHHHHHHHhh-hccCCCCeeeEeecCCCccch------hhhccCCCe--eEEEecCCCCCC
Q 009719 341 KNGYDVFEADSRRW---RRRVAYYKNTLN-VKLGTPAIRNIMDMNAFFGGF------AAALTSDPV--WVMNVVPARKSS 408 (527)
Q Consensus 341 g~~~~~f~~d~~~W---~~~v~~Y~~~l~-~~i~~~~iRnvmDm~ag~GgF------aAaL~~~~V--wvMnvvp~~~~n 408 (527)
..+-|.|++|.-+. ++.+.++.+... ..-...+.-.|||+|||.|-. ||+-...+| +..=--| .+--
T Consensus 321 s~tYevFEkD~vKy~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~ 399 (637)
T 4gqb_A 321 SQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVV 399 (637)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHH
T ss_pred hhhhhhhcCChhhHHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHH
Confidence 35679999997544 333333332111 112334567899999999955 455555544 4432212 1236
Q ss_pred chhHhhhccc---cccccccCCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceee----cccccCCcEEEE
Q 009719 409 TLSVIYDRGL---IGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEM----DRMLRPEGTVVV 479 (527)
Q Consensus 409 tl~vi~eRGL---iG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEm----DRILRP~G~~ii 479 (527)
+++++-+.|+ |=++|.--|-.. =|.-.|+| .|-|. +-|.+...|+|+ ||.|+|||.+|=
T Consensus 400 a~~~v~~N~~~dkVtVI~gd~eev~-LPEKVDII-----VSEwM------G~fLl~E~mlevL~Ardr~LKPgGimiP 465 (637)
T 4gqb_A 400 TLENWQFEEWGSQVTVVSSDMREWV-APEKADII-----VSELL------GSFADNELSPECLDGAQHFLKDDGVSIP 465 (637)
T ss_dssp HHHHHHHHTTGGGEEEEESCTTTCC-CSSCEEEE-----ECCCC------BTTBGGGCHHHHHHHHGGGEEEEEEEES
T ss_pred HHHHHHhccCCCeEEEEeCcceecc-CCcccCEE-----EEEcC------cccccccCCHHHHHHHHHhcCCCcEEcc
Confidence 7888888886 545554334432 35555554 55666 345555555564 999999998763
|
| >2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A* | Back alignment and structure |
|---|
Probab=93.63 E-value=0.017 Score=58.35 Aligned_cols=88 Identities=10% Similarity=0.047 Sum_probs=51.6
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCCCchhHhhh----ccc---cccccccCCCCCCCCCccchhhhcCcccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYD----RGL---IGVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~ntl~vi~e----RGL---iG~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
.+|+|++||+|+|+.+ .....-|..|=.. +..+..+-+ .|+ +-+++ .-...++.+||+|-++--..
T Consensus 197 ~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s--~~ai~~a~~n~~~n~l~~~v~~~~---~D~~~~~~~fD~Vi~dpP~~- 269 (336)
T 2yx1_A 197 DVVVDMFAGVGPFSIA-CKNAKKIYAIDIN--PHAIELLKKNIKLNKLEHKIIPIL---SDVREVDVKGNRVIMNLPKF- 269 (336)
T ss_dssp CEEEETTCTTSHHHHH-TTTSSEEEEEESC--HHHHHHHHHHHHHTTCTTTEEEEE---SCGGGCCCCEEEEEECCTTT-
T ss_pred CEEEEccCccCHHHHh-ccCCCEEEEEECC--HHHHHHHHHHHHHcCCCCcEEEEE---CChHHhcCCCcEEEECCcHh-
Confidence 5799999999999988 6644333333211 122332222 233 21222 11112337899988752211
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
...++-++-|+|+|||.+++.+
T Consensus 270 ------------~~~~l~~~~~~L~~gG~l~~~~ 291 (336)
T 2yx1_A 270 ------------AHKFIDKALDIVEEGGVIHYYT 291 (336)
T ss_dssp ------------GGGGHHHHHHHEEEEEEEEEEE
T ss_pred ------------HHHHHHHHHHHcCCCCEEEEEE
Confidence 1367788889999999998864
|
| >2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A* | Back alignment and structure |
|---|
Probab=93.52 E-value=0.089 Score=53.52 Aligned_cols=137 Identities=15% Similarity=0.132 Sum_probs=69.3
Q ss_pred eEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhhhccccccccccCCCCCCCCCccchhhhcCccccccC
Q 009719 376 NIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKN 450 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~ 450 (527)
.|||.|||.|+|+.++.++ .|.-+-+-|.... ++ + ++--...|..+. . ....||+|-++--|.....
T Consensus 42 ~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~----~a-~-~~~~~~~D~~~~-~-~~~~fD~Ii~NPPy~~~~~ 113 (421)
T 2ih2_A 42 RVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALD----LP-P-WAEGILADFLLW-E-PGEAFDLILGNPPYGIVGE 113 (421)
T ss_dssp EEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCC----CC-T-TEEEEESCGGGC-C-CSSCEEEEEECCCCCCBSC
T ss_pred EEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHH----hC-C-CCcEEeCChhhc-C-ccCCCCEEEECcCccCccc
Confidence 7999999999999988653 2333333332211 11 1 110011111111 0 1268999998644432210
Q ss_pred C-------------------CCCCCCCc-ccccceeecccccCCcEEEEeCCH-----HHHHHHHHHHhcCCceeEEecC
Q 009719 451 P-------------------GSNKNSCS-LVDLMVEMDRMLRPEGTVVVRDSP-----EVIDKVSRIANTVRWTAAVHDK 505 (527)
Q Consensus 451 ~-------------------~~~~~rC~-~~~illEmDRILRP~G~~iird~~-----~~~~~i~~i~~~l~W~~~~~~~ 505 (527)
. .....+-+ ...++-.+-++|+|||.+++--.. +...++++.+....+ ..+.+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~-~~i~~l 192 (421)
T 2ih2_A 114 ASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGK-TSVYYL 192 (421)
T ss_dssp TTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSE-EEEEEE
T ss_pred ccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcCC-eEEEEC
Confidence 0 00000001 114566788999999998765322 234667777666666 332221
Q ss_pred ---CCCCCCCceEEEEEec
Q 009719 506 ---EPGSNGREKILVATKS 521 (527)
Q Consensus 506 ---e~~~~~~ekiLi~~K~ 521 (527)
-++....--|++.+|.
T Consensus 193 ~~~F~~~~~~~~il~~~k~ 211 (421)
T 2ih2_A 193 GEVFPQKKVSAVVIRFQKS 211 (421)
T ss_dssp ESCSTTCCCCEEEEEEESS
T ss_pred CCCCCCCCccEEEEEEEeC
Confidence 1233334456777773
|
| >3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A* | Back alignment and structure |
|---|
Probab=93.47 E-value=0.026 Score=54.89 Aligned_cols=123 Identities=11% Similarity=0.104 Sum_probs=73.2
Q ss_pred hhhccCCCCeeeEeecCCCccchhhhccCC-C---eeEEEecCCCCCCchhHhhhccccc----cccccCCCCCCCCC-c
Q 009719 365 LNVKLGTPAIRNIMDMNAFFGGFAAALTSD-P---VWVMNVVPARKSSTLSVIYDRGLIG----VYHDWCEPFSTYPR-T 435 (527)
Q Consensus 365 l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~-~---VwvMnvvp~~~~ntl~vi~eRGLiG----~~hdwce~fstYPr-t 435 (527)
+...+..+ -.|+|+|||+|.++.+|... | |+-+-+-|.--...-.-+-..|+-. ...|+-++++ |. .
T Consensus 9 l~~~v~~g--~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~--~~~~ 84 (225)
T 3kr9_A 9 VASFVSQG--AILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFE--ETDQ 84 (225)
T ss_dssp HHTTSCTT--EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC--GGGC
T ss_pred HHHhCCCC--CEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcc--cCcC
Confidence 33445555 47999999999999998654 3 3333332221111112233345422 2234434432 13 5
Q ss_pred cchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCceeEEe
Q 009719 436 YDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 436 yDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~~~~ 503 (527)
||+|=-.+. .+..|..||-+.-..|+|+|++|++-. .-..++++.+....|.+.-.
T Consensus 85 ~D~IviaG~-----------Gg~~i~~Il~~~~~~L~~~~~lVlq~~-~~~~~vr~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 85 VSVITIAGM-----------GGRLIARILEEGLGKLANVERLILQPN-NREDDLRIWLQDHGFQIVAE 140 (225)
T ss_dssp CCEEEEEEE-----------CHHHHHHHHHHTGGGCTTCCEEEEEES-SCHHHHHHHHHHTTEEEEEE
T ss_pred CCEEEEcCC-----------ChHHHHHHHHHHHHHhCCCCEEEEECC-CCHHHHHHHHHHCCCEEEEE
Confidence 885432211 223356788888899999999999876 35678888888889987654
|
| >3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A | Back alignment and structure |
|---|
Probab=93.25 E-value=0.01 Score=57.91 Aligned_cols=102 Identities=22% Similarity=0.194 Sum_probs=52.1
Q ss_pred eeEeecCCCccchhhhccC--CC-eeEEEecCCCCC-CchhHhhhc----cc--cccc-cccCCCCCCC----CCccchh
Q 009719 375 RNIMDMNAFFGGFAAALTS--DP-VWVMNVVPARKS-STLSVIYDR----GL--IGVY-HDWCEPFSTY----PRTYDLI 439 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~--~~-VwvMnvvp~~~~-ntl~vi~eR----GL--iG~~-hdwce~fstY----PrtyDLi 439 (527)
..|||+|||.|+++..|.. .+ --| +-.|.. ..+..+-++ |+ +-+. .|.. .+... +..||+|
T Consensus 85 ~~VLDlgaG~G~~t~~la~~~~~~~~v---~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~-~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 85 DFILDMCAAPGGKTTHLAQLMKNKGTI---VAVEISKTRTKALKSNINRMGVLNTIIINADMR-KYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CEEEETTCTTCHHHHHHHHHTTTCSEE---EEEESCHHHHHHHHHHHHHTTCCSEEEEESCHH-HHHHHHHHTTCCEEEE
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCEE---EEECCCHHHHHHHHHHHHHhCCCcEEEEeCChH-hcchhhhhccccCCEE
Confidence 4799999999999977754 22 222 222222 334443333 43 1111 1111 11111 4679999
Q ss_pred hhcCcccccc----CCC-CC---CCC-CcccccceeecccccCCcEEEEe
Q 009719 440 HVSGIESLIK----NPG-SN---KNS-CSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 440 Ha~~~fs~~~----~~~-~~---~~r-C~~~~illEmDRILRP~G~~iir 480 (527)
-++--+|... .|. .. .+. -....+|-++-|+|+|||.+++.
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~s 210 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYS 210 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 8763222110 000 00 000 11246777888999999999997
|
| >2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=93.16 E-value=0.079 Score=52.67 Aligned_cols=81 Identities=16% Similarity=0.138 Sum_probs=49.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC-CcEEeeccccCCCCCCCcccEEEecCcccccccChH-HH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA-TY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~-~a 216 (527)
.|.++..|..++..+..+ |.++.+++.|+++ +. .+.+..+|+..+|++ +||+|+|... .+|....- ..
T Consensus 53 ~G~lt~~La~~~~~v~~v---Di~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~--~~D~Vv~n~p-y~~~~~~~~~l 126 (299)
T 2h1r_A 53 TGNLTVKLLPLAKKVITI---DIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP--KFDVCTANIP-YKISSPLIFKL 126 (299)
T ss_dssp TSTTHHHHTTTSSEEEEE---CSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC--CCSEEEEECC-GGGHHHHHHHH
T ss_pred CcHHHHHHHhcCCEEEEE---ECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc--cCCEEEEcCC-cccccHHHHHH
Confidence 466666777776544444 7788888888764 33 356677888888775 8999999754 35543321 12
Q ss_pred H---------------HHHhhcccCCcE
Q 009719 217 L---------------IEVDRLLRPGGY 229 (527)
Q Consensus 217 L---------------~Ei~RVLRPGG~ 229 (527)
| .++.|+++|+|.
T Consensus 127 l~~~~~~~~~~l~~Q~e~a~rlla~~G~ 154 (299)
T 2h1r_A 127 ISHRPLFKCAVLMFQKEFAERMLANVGD 154 (299)
T ss_dssp HHCSSCCSEEEEEEEHHHHHHHTCCTTS
T ss_pred HhcCCccceeeehHHHHHHHHHhcCCCC
Confidence 2 346788888774
|
| >3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A* | Back alignment and structure |
|---|
Probab=93.05 E-value=0.081 Score=52.65 Aligned_cols=69 Identities=13% Similarity=-0.044 Sum_probs=53.9
Q ss_pred CcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEE
Q 009719 163 RDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 163 ~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lvi 232 (527)
.|++..++++++++ |.+..+.+.|...-|++. +||+|....+++|..+..+..+.++..-|+|+|.+|-
T Consensus 132 ~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~-~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 132 CDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAE-AGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp EESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCC-BCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEE
T ss_pred EeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCC-CcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEE
Confidence 37778899888765 667778888988888776 8999999988877755443366699999999977664
|
| >1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A* | Back alignment and structure |
|---|
Probab=93.05 E-value=0.17 Score=52.80 Aligned_cols=86 Identities=13% Similarity=0.164 Sum_probs=57.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccC----CCCCCCcccEEEecCcccccccCh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRR----LPFPAFSFDIVHCSRCLIPFTAYN 213 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~----LPFpD~SFDlV~cs~~l~hw~d~~ 213 (527)
+|.++..|...+..+..+ |.++.+++.|+++ ++. +.+..+|+.. +|+++++||+|++.--. ....
T Consensus 297 ~G~~~~~la~~~~~V~gv---D~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr---~g~~ 370 (433)
T 1uwv_A 297 MGNFTLPLATQAASVVGV---EGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPAR---AGAA 370 (433)
T ss_dssp TTTTHHHHHTTSSEEEEE---ESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCCT---TCCH
T ss_pred CCHHHHHHHhhCCEEEEE---eCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEECCCC---ccHH
Confidence 667777777665433333 7788888888754 443 6677788766 67888999999985321 1112
Q ss_pred HHHHHHHhhcccCCcEEEEecCC
Q 009719 214 ATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 214 ~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
. ++..+. -++|++.+++|-.|
T Consensus 371 ~-~~~~l~-~~~p~~ivyvsc~p 391 (433)
T 1uwv_A 371 G-VMQQII-KLEPIRIVYVSCNP 391 (433)
T ss_dssp H-HHHHHH-HHCCSEEEEEESCH
T ss_pred H-HHHHHH-hcCCCeEEEEECCh
Confidence 2 444444 37999999998754
|
| >3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=92.97 E-value=0.036 Score=57.72 Aligned_cols=97 Identities=15% Similarity=0.215 Sum_probs=61.9
Q ss_pred eeeEeecCCCccchhhhcc----------------C-CCeeEE-EecCCCCCCch----------------------hHh
Q 009719 374 IRNIMDMNAFFGGFAAALT----------------S-DPVWVM-NVVPARKSSTL----------------------SVI 413 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~----------------~-~~VwvM-nvvp~~~~ntl----------------------~vi 413 (527)
-=.|+|+||+.|..+..+. + ..+.|. |=.|.+.-||| +-.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 4568999999998877661 1 346664 66666442322 123
Q ss_pred hhccccccccccCCCCCCCC-CccchhhhcCccccccCCCCCCCCCc---------------------------------
Q 009719 414 YDRGLIGVYHDWCEPFSTYP-RTYDLIHVSGIESLIKNPGSNKNSCS--------------------------------- 459 (527)
Q Consensus 414 ~eRGLiG~~hdwce~fstYP-rtyDLiHa~~~fs~~~~~~~~~~rC~--------------------------------- 459 (527)
|-=|..|.++... || +++|++|.+..|- |. .+.-+.
T Consensus 133 f~~gvpgSFy~rl-----fP~~S~d~v~Ss~aLH-Wl----s~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~ 202 (374)
T 3b5i_A 133 FVAGVPGSFYRRL-----FPARTIDFFHSAFSLH-WL----SQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQA 202 (374)
T ss_dssp EEEEEESCTTSCC-----SCTTCEEEEEEESCTT-BC----SSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHH
T ss_pred EEEecChhhhccc-----CCCcceEEEEecceee-ee----ccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHH
Confidence 4445677777543 35 8999999987775 43 111121
Q ss_pred -ccccceeecccccCCcEEEEe
Q 009719 460 -LVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 460 -~~~illEmDRILRP~G~~iir 480 (527)
+..+|-..=|.|+|||.+++.
T Consensus 203 D~~~fL~~ra~eL~pGG~mvl~ 224 (374)
T 3b5i_A 203 DLAEFLRARAAEVKRGGAMFLV 224 (374)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEE
Confidence 223455669999999999986
|
| >2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A | Back alignment and structure |
|---|
Probab=92.86 E-value=0.097 Score=51.83 Aligned_cols=92 Identities=29% Similarity=0.350 Sum_probs=52.9
Q ss_pred cEEeeccccC-CC-CCCCcccEEEecCcc---cccc----------------cChHHHHHHHhhcccCCcEEEEecCCCC
Q 009719 180 AFVAMLGTRR-LP-FPAFSFDIVHCSRCL---IPFT----------------AYNATYLIEVDRLLRPGGYLVISGPPVQ 238 (527)
Q Consensus 180 a~~~v~dae~-LP-FpD~SFDlV~cs~~l---~hw~----------------d~~~~aL~Ei~RVLRPGG~lviS~pp~~ 238 (527)
..+..+|+.. |+ +++++||+|+++==. ..+. +.....+.|+.|+|||||.+++......
T Consensus 22 ~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~~ 101 (297)
T 2zig_A 22 HRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDVA 101 (297)
T ss_dssp EEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEE
T ss_pred CEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCCc
Confidence 3566677654 44 678999999987211 1111 0112367899999999999998765211
Q ss_pred --CC--Cch---hHHHHHHHHHHhcceEEeeeecceEEEeCCCc
Q 009719 239 --WP--KQD---KEWADLQAVARALCYELIAVDGNTVIWKKPVG 275 (527)
Q Consensus 239 --~~--~~~---~~w~~i~~l~~~mcW~~~~~~~~v~iwrKp~~ 275 (527)
.. +.. .-...+..+.+..-|.... .-||.|+.+
T Consensus 102 ~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~----~iiW~K~~~ 141 (297)
T 2zig_A 102 VARRRFGRHLVFPLHADIQVRCRKLGFDNLN----PIIWHKHTN 141 (297)
T ss_dssp EECC----EEEECHHHHHHHHHHHTTCEEEE----EEEEECC--
T ss_pred cccccCCcccccccHHHHHHHHHHcCCeeec----cEEEeCCCC
Confidence 00 000 0124455556666676553 448999853
|
| >3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=92.86 E-value=0.17 Score=49.37 Aligned_cols=109 Identities=18% Similarity=0.010 Sum_probs=68.7
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYL 217 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL 217 (527)
|..+.+|...+... .+...|.++.+++.|+++ |+. +.+..+|....+.+++.||+|+.+...-+ .-...|
T Consensus 33 G~l~i~la~~~~~~-~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmGg~---lI~~IL 108 (230)
T 3lec_A 33 AYLPIFLLQMGYCD-FAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMGGR---LIADIL 108 (230)
T ss_dssp THHHHHHHHTTCEE-EEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECHH---HHHHHH
T ss_pred HHHHHHHHHhCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCchH---HHHHHH
Confidence 33444455554221 233347788888888754 553 56677787666666668999875443211 112378
Q ss_pred HHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeeee
Q 009719 218 IEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAVD 264 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~~ 264 (527)
.+..+.|+++|+|++++-. ....+.+.....-|....+.
T Consensus 109 ~~~~~~l~~~~~lIlqp~~--------~~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 109 NNDIDKLQHVKTLVLQPNN--------REDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp HHTGGGGTTCCEEEEEESS--------CHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHhCcCCEEEEECCC--------ChHHHHHHHHHCCCEEEEEE
Confidence 8889999999999999741 13445555666678877664
|
| >3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A* | Back alignment and structure |
|---|
Probab=92.75 E-value=0.28 Score=48.91 Aligned_cols=109 Identities=7% Similarity=0.153 Sum_probs=66.6
Q ss_pred hhccccccccCCe-eEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHH
Q 009719 143 VASFGGSMLSENI-LTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNAT 215 (527)
Q Consensus 143 vgsfga~Ll~r~V-~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~ 215 (527)
+|.|+-.++.++. .+..+ |.++..++.+++. ++. ..+..+|+..++. .+.||.|+...- + ....
T Consensus 136 ~G~~~i~~a~~g~~~V~av---D~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~p--~---~~~~ 206 (278)
T 3k6r_A 136 IGHLSLPIAVYGKAKVIAI---EKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV--V---RTHE 206 (278)
T ss_dssp TTTTTHHHHHHTCCEEEEE---CCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC--S---SGGG
T ss_pred CcHHHHHHHHhcCCeEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-ccCCCEEEECCC--C---cHHH
Confidence 6677666665553 33333 6666777766543 554 4566788877664 578999986531 1 2223
Q ss_pred HHHHHhhcccCCcEEEEecC-CCCCCCchhHHHHHHHHHHhcceEEe
Q 009719 216 YLIEVDRLLRPGGYLVISGP-PVQWPKQDKEWADLQAVARALCYELI 261 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p-p~~~~~~~~~w~~i~~l~~~mcW~~~ 261 (527)
+|.+..++|||||.+.+..- +... ......+.++++++...++.-
T Consensus 207 ~l~~a~~~lk~gG~ih~~~~~~e~~-~~~~~~e~i~~~~~~~g~~v~ 252 (278)
T 3k6r_A 207 FIPKALSIAKDGAIIHYHNTVPEKL-MPREPFETFKRITKEYGYDVE 252 (278)
T ss_dssp GHHHHHHHEEEEEEEEEEEEEEGGG-TTTTTHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHcCCCCEEEEEeeecccc-cchhHHHHHHHHHHHcCCcEE
Confidence 88999999999999976432 1100 011234567777777777653
|
| >3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=92.37 E-value=0.063 Score=52.39 Aligned_cols=139 Identities=17% Similarity=0.179 Sum_probs=79.6
Q ss_pred hhhccCCCCeeeEeecCCCccchhhhccCC-C---eeEEEecCCCCCCchhHhhhccccc----cccccCCCCCCCCC-c
Q 009719 365 LNVKLGTPAIRNIMDMNAFFGGFAAALTSD-P---VWVMNVVPARKSSTLSVIYDRGLIG----VYHDWCEPFSTYPR-T 435 (527)
Q Consensus 365 l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~-~---VwvMnvvp~~~~ntl~vi~eRGLiG----~~hdwce~fstYPr-t 435 (527)
+...+..+ -.|+|+|||.|-++.+|... + |+-+-+.|.--...-.-+-..|+-. ...|.-+.+. |. .
T Consensus 15 i~~~v~~g--~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~--~~~~ 90 (230)
T 3lec_A 15 VANYVPKG--ARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFE--EADN 90 (230)
T ss_dssp HHTTSCTT--EEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC--GGGC
T ss_pred HHHhCCCC--CEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccc--cccc
Confidence 34445555 57999999999999998665 2 3333333221111112233335422 1223333332 33 5
Q ss_pred cchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCceeEEecC--CCCCCCCc
Q 009719 436 YDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAVHDK--EPGSNGRE 513 (527)
Q Consensus 436 yDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~~~~~~--e~~~~~~e 513 (527)
||+|=-.+. ..-.|..||-+.-+.|.++|++|++-... .+.+++.+....|.+.-.+. |++- --
T Consensus 91 ~D~IviaGm-----------Gg~lI~~IL~~~~~~l~~~~~lIlqp~~~-~~~lr~~L~~~Gf~i~~E~lv~e~~~--~Y 156 (230)
T 3lec_A 91 IDTITICGM-----------GGRLIADILNNDIDKLQHVKTLVLQPNNR-EDDLRKWLAANDFEIVAEDILTENDK--RY 156 (230)
T ss_dssp CCEEEEEEE-----------CHHHHHHHHHHTGGGGTTCCEEEEEESSC-HHHHHHHHHHTTEEEEEEEEEEC--C--EE
T ss_pred cCEEEEeCC-----------chHHHHHHHHHHHHHhCcCCEEEEECCCC-hHHHHHHHHHCCCEEEEEEEEEECCE--EE
Confidence 776532222 12234567777788899999999997544 67888888899998765432 2222 23
Q ss_pred eEEEEEec
Q 009719 514 KILVATKS 521 (527)
Q Consensus 514 kiLi~~K~ 521 (527)
.|+++.+.
T Consensus 157 eii~~~~~ 164 (230)
T 3lec_A 157 EILVVKHG 164 (230)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 46776653
|
| >2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli} | Back alignment and structure |
|---|
Probab=92.04 E-value=0.027 Score=60.25 Aligned_cols=102 Identities=25% Similarity=0.330 Sum_probs=53.8
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCC-CchhHhhhc----cc--cccc-cccCCCCCC-CCCccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKS-STLSVIYDR----GL--IGVY-HDWCEPFST-YPRTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~-ntl~vi~eR----GL--iG~~-hdwce~fst-YPrtyDLiHa~ 442 (527)
..||||+||.|+++..|... .--| +-.|-. .-+..+-++ |+ +-+. .|-. .++. .+.+||.|-++
T Consensus 119 ~~VLDl~aGpG~kt~~lA~~~~~~g~V---~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~-~~~~~~~~~fD~Il~D 194 (479)
T 2frx_A 119 QRVMDVAAAPGSKTTQISARMNNEGAI---LANEFSASRVKVLHANISRCGISNVALTHFDGR-VFGAAVPEMFDAILLD 194 (479)
T ss_dssp SEEEESSCTTSHHHHHHHHHTTTCSEE---EEECSSHHHHHHHHHHHHHHTCCSEEEECCCST-THHHHSTTCEEEEEEE
T ss_pred CEEEEeCCCCCHHHHHHHHhCCCCCEE---EEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHH-HhhhhccccCCEEEEC
Confidence 47999999999998777542 2222 223333 444444333 54 2222 2221 1222 35789999864
Q ss_pred Cccc----cccCCCCCCCC-------C--cccccceeecccccCCcEEEEe
Q 009719 443 GIES----LIKNPGSNKNS-------C--SLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 443 ~~fs----~~~~~~~~~~r-------C--~~~~illEmDRILRP~G~~iir 480 (527)
--.| .-++|...... | .-..+|-++=|+|||||.+|++
T Consensus 195 ~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~Lvys 245 (479)
T 2frx_A 195 APCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYS 245 (479)
T ss_dssp CCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 2111 10111100000 0 0125778888999999999997
|
| >2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=91.75 E-value=0.1 Score=54.81 Aligned_cols=104 Identities=15% Similarity=0.192 Sum_probs=55.7
Q ss_pred eeEeecCCCccchhhhccC--CC-eeEEEecCCCCC-CchhHhhhc----cc--ccc-ccccCCCCCCCC-Cccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTS--DP-VWVMNVVPARKS-STLSVIYDR----GL--IGV-YHDWCEPFSTYP-RTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~--~~-VwvMnvvp~~~~-ntl~vi~eR----GL--iG~-~hdwce~fstYP-rtyDLiHa~ 442 (527)
..|||+|||.|+++..|.. .+ -- |+-.|.. ..+..+-++ |+ +-+ ..|..+.-..++ .+||+|-++
T Consensus 261 ~~VLDlgaG~G~~t~~la~~~~~~~~---v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D 337 (450)
T 2yxl_A 261 ETVVDLAAAPGGKTTHLAELMKNKGK---IYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLD 337 (450)
T ss_dssp CEEEESSCTTCHHHHHHHHHTTTCSE---EEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEE
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCE---EEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEc
Confidence 3799999999999888854 22 22 2223333 445554444 55 211 123222111255 789999853
Q ss_pred Cccccc----cCCCC--CCCCCcc-------cccceeecccccCCcEEEEeC
Q 009719 443 GIESLI----KNPGS--NKNSCSL-------VDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 443 ~~fs~~----~~~~~--~~~rC~~-------~~illEmDRILRP~G~~iird 481 (527)
--.|.. ..|.. ....=++ ..+|-++-|+|+|||.+++.+
T Consensus 338 ~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t 389 (450)
T 2yxl_A 338 APCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT 389 (450)
T ss_dssp CCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 211110 00000 0000011 357888999999999999874
|
| >1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A* | Back alignment and structure |
|---|
Probab=91.69 E-value=0.7 Score=48.18 Aligned_cols=130 Identities=16% Similarity=0.231 Sum_probs=72.6
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc--c-ccccccCCCCCC--CC-CccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL--I-GVYHDWCEPFST--YP-RTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL--i-G~~hdwce~fst--YP-rtyDLiHa~~ 443 (527)
.+|+|+|||.|.|+.+|....--|. -.|.. ..+..+-+ .|+ + =+..|+.+.+.. ++ .+||+|=++-
T Consensus 288 ~~VLDlgcG~G~~~~~la~~~~~V~---gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dP 364 (433)
T 1uwv_A 288 DRVLDLFCGMGNFTLPLATQAASVV---GVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDP 364 (433)
T ss_dssp CEEEEESCTTTTTHHHHHTTSSEEE---EEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECC
T ss_pred CEEEECCCCCCHHHHHHHhhCCEEE---EEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEECC
Confidence 4799999999999999987743332 22322 23332222 233 1 122344444433 22 5788876531
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCcee---EEecCCCCCCCCceEEEEEe
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTA---AVHDKEPGSNGREKILVATK 520 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~---~~~~~e~~~~~~ekiLi~~K 520 (527)
.. ..| ..++-.+- -++|++.++++-+...+.+--.++..--|.. ...|.=+.+..-|-|.+-+|
T Consensus 365 --------Pr--~g~--~~~~~~l~-~~~p~~ivyvsc~p~tlard~~~l~~~Gy~~~~~~~~d~Fp~t~HvE~v~ll~r 431 (433)
T 1uwv_A 365 --------AR--AGA--AGVMQQII-KLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSR 431 (433)
T ss_dssp --------CT--TCC--HHHHHHHH-HHCCSEEEEEESCHHHHHHHHHHHHHTTCEEEEEEEECCSTTSSCCEEEEEEEC
T ss_pred --------CC--ccH--HHHHHHHH-hcCCCeEEEEECChHHHHhhHHHHHHCCcEEEEEEEeccCCCCCeEEEEEEEEE
Confidence 11 112 23332222 2789999999998887666444444445654 34565555556677766655
|
| >3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=91.67 E-value=0.23 Score=48.88 Aligned_cols=109 Identities=11% Similarity=-0.088 Sum_probs=67.1
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYL 217 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL 217 (527)
|..+.+|...+.. -.+...|.++..++.|+++ |+. +.+..+|......++..||+|+.+...-. --...|
T Consensus 33 G~l~i~la~~~~~-~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmGg~---lI~~IL 108 (244)
T 3gnl_A 33 AYLPCFAVKNQTA-SFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMGGT---LIRTIL 108 (244)
T ss_dssp THHHHHHHHTTSE-EEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECHH---HHHHHH
T ss_pred HHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCchH---HHHHHH
Confidence 4444445555421 1233337788888888765 554 45667777666655557999886543211 111378
Q ss_pred HHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeeee
Q 009719 218 IEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAVD 264 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~~ 264 (527)
.+..+.|+++|+|++++-. ....+.+.....-|....+.
T Consensus 109 ~~~~~~L~~~~~lIlq~~~--------~~~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 109 EEGAAKLAGVTKLILQPNI--------AAWQLREWSEQNNWLITSEA 147 (244)
T ss_dssp HHTGGGGTTCCEEEEEESS--------CHHHHHHHHHHHTEEEEEEE
T ss_pred HHHHHHhCCCCEEEEEcCC--------ChHHHHHHHHHCCCEEEEEE
Confidence 8899999999999999741 12344555556678776553
|
| >2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638} | Back alignment and structure |
|---|
Probab=91.64 E-value=0.09 Score=53.67 Aligned_cols=114 Identities=11% Similarity=0.035 Sum_probs=67.6
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc--c-ccccccCCCCCC-CCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL--I-GVYHDWCEPFST-YPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL--i-G~~hdwce~fst-YPrtyDLiHa~~~f 445 (527)
..|||+| |.|.++.+|..... .-.|+-+|-. ..+.++-++ |+ + -+..|..+.++. ++.+||+|=++..|
T Consensus 174 ~~VLDlG-G~G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~ 251 (373)
T 2qm3_A 174 KDIFVLG-DDDLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPE 251 (373)
T ss_dssp CEEEEES-CTTCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCS
T ss_pred CEEEEEC-CCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCC
Confidence 6899999 99999988854321 0122333432 455555443 54 2 223455544543 34689999887655
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCc-EEEEe--C---CHHHHHHHHHHHh-cCCcee
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEG-TVVVR--D---SPEVIDKVSRIAN-TVRWTA 500 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G-~~iir--d---~~~~~~~i~~i~~-~l~W~~ 500 (527)
... .+..+|-++-|+|+||| .+++. . +.+.+..+++++. .+....
T Consensus 252 ~~~----------~~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 303 (373)
T 2qm3_A 252 TLE----------AIRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVI 303 (373)
T ss_dssp SHH----------HHHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEE
T ss_pred chH----------HHHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcch
Confidence 432 13678889999999999 33443 2 2333366677665 555544
|
| >3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A* | Back alignment and structure |
|---|
Probab=91.53 E-value=0.3 Score=49.21 Aligned_cols=86 Identities=10% Similarity=0.066 Sum_probs=59.8
Q ss_pred hhccccccccC--CeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 143 VASFGGSMLSE--NILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r--~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
.|-++..++.. +.. +...|+++.++++++++ |++..+.+.|...-+ +...||+|.....++|..+..+..
T Consensus 143 ~GpLAl~~~~~~p~a~---y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkti~~Le~q~kg~ 218 (281)
T 3lcv_B 143 LNPLAAPWMGLPAETV---YIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKTLPCLETQQRGS 218 (281)
T ss_dssp TGGGCCTTTTCCTTCE---EEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTCHHHHHHHSTTH
T ss_pred ccHHHHHHHhhCCCCE---EEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC-CCCCcchHHHHHHHHHhhhhhhHH
Confidence 45555555443 222 22337788999988765 677777777754334 568899999999988876554435
Q ss_pred HHHHhhcccCCcEEEE
Q 009719 217 LIEVDRLLRPGGYLVI 232 (527)
Q Consensus 217 L~Ei~RVLRPGG~lvi 232 (527)
+.++..-|+|||.+|-
T Consensus 219 g~~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 219 GWEVIDIVNSPNIVVT 234 (281)
T ss_dssp HHHHHHHSSCSEEEEE
T ss_pred HHHHHHHhCCCCEEEe
Confidence 5599999999998874
|
| >2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45 | Back alignment and structure |
|---|
Probab=91.41 E-value=0.2 Score=52.40 Aligned_cols=71 Identities=14% Similarity=0.159 Sum_probs=50.0
Q ss_pred cChHHHHHHHHH----cCC---CcEEeeccccCCCCCCCcccEEEecCcccc--cccCh--------------HHHHHHH
Q 009719 164 DSHKAQIQFALE----RGI---PAFVAMLGTRRLPFPAFSFDIVHCSRCLIP--FTAYN--------------ATYLIEV 220 (527)
Q Consensus 164 D~seaqvq~A~e----Rg~---pa~~~v~dae~LPFpD~SFDlV~cs~~l~h--w~d~~--------------~~aL~Ei 220 (527)
|.++.+++.|+. +|+ ...+..+|+...+.. ..||+|++.--+.+ +.+.. ..++.++
T Consensus 215 Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 293 (445)
T 2okc_A 215 DNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHM 293 (445)
T ss_dssp ESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHH
Confidence 556677777764 465 456777888777665 38999999843333 21111 2489999
Q ss_pred hhcccCCcEEEEecC
Q 009719 221 DRLLRPGGYLVISGP 235 (527)
Q Consensus 221 ~RVLRPGG~lviS~p 235 (527)
.++|||||++++..|
T Consensus 294 ~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 294 MLMLKTGGRAAVVLP 308 (445)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHhccCCEEEEEEC
Confidence 999999999998876
|
| >1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24 | Back alignment and structure |
|---|
Probab=91.06 E-value=0.08 Score=52.20 Aligned_cols=22 Identities=9% Similarity=0.199 Sum_probs=18.7
Q ss_pred eeeEeecCCCccchhhhccCCC
Q 009719 374 IRNIMDMNAFFGGFAAALTSDP 395 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~ 395 (527)
-.+|||+|||.|.++.+|.+..
T Consensus 29 ~~~VLDiG~G~G~lt~~L~~~~ 50 (285)
T 1zq9_A 29 TDVVLEVGPGTGNMTVKLLEKA 50 (285)
T ss_dssp TCEEEEECCTTSTTHHHHHHHS
T ss_pred CCEEEEEcCcccHHHHHHHhhC
Confidence 3589999999999999997654
|
| >3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A* | Back alignment and structure |
|---|
Probab=90.75 E-value=0.18 Score=50.79 Aligned_cols=139 Identities=12% Similarity=0.079 Sum_probs=76.5
Q ss_pred HHHHhhhccCCCCeeeEeecCCCccchhhhccCC----CeeEEEecCCCCCCchhHhhhc----cccccccccCC-CCCC
Q 009719 361 YKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSD----PVWVMNVVPARKSSTLSVIYDR----GLIGVYHDWCE-PFST 431 (527)
Q Consensus 361 Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~----~VwvMnvvp~~~~ntl~vi~eR----GLiG~~hdwce-~fst 431 (527)
|-..+. .+ +...+|||+|||+|-||.++... .||-+-|-+ .-+.++-++ |+-+.+ .++. .-.+
T Consensus 123 Y~~i~~-~i--~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~----~~le~a~~~l~~~g~~~~~-~v~D~~~~~ 194 (281)
T 3lcv_B 123 YRELFR-HL--PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDA----RLVGFVDEALTRLNVPHRT-NVADLLEDR 194 (281)
T ss_dssp HHHHGG-GS--CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBH----HHHHHHHHHHHHTTCCEEE-EECCTTTSC
T ss_pred HHHHHh-cc--CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCH----HHHHHHHHHHHhcCCCceE-EEeeecccC
Confidence 554333 33 44789999999999999999665 356554421 233333332 443322 1121 1233
Q ss_pred CCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-----------HHHHHHHHHHHhcCCcee
Q 009719 432 YPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-----------PEVIDKVSRIANTVRWTA 500 (527)
Q Consensus 432 YPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-----------~~~~~~i~~i~~~l~W~~ 500 (527)
-|-+||++=+.-+.-... .+.. . .++++=..|+|+|.||--+. ..+-...++.+..--|.+
T Consensus 195 p~~~~DvaL~lkti~~Le---~q~k----g-~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~ 266 (281)
T 3lcv_B 195 LDEPADVTLLLKTLPCLE---TQQR----G-SGWEVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRI 266 (281)
T ss_dssp CCSCCSEEEETTCHHHHH---HHST----T-HHHHHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCE
T ss_pred CCCCcchHHHHHHHHHhh---hhhh----H-HHHHHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCce
Confidence 457888863322222121 0111 1 23366678999999998875 235666777776666655
Q ss_pred EEecCCCCCCCCceEEEEEe
Q 009719 501 AVHDKEPGSNGREKILVATK 520 (527)
Q Consensus 501 ~~~~~e~~~~~~ekiLi~~K 520 (527)
..... ..|-+.|.+|
T Consensus 267 ~~~~~-----~nEl~y~i~k 281 (281)
T 3lcv_B 267 QRLEI-----GNELIYVIQK 281 (281)
T ss_dssp EEEEE-----TTEEEEEEC-
T ss_pred eeeee-----cCeeEEEecC
Confidence 44322 3566666554
|
| >3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A* | Back alignment and structure |
|---|
Probab=90.59 E-value=0.036 Score=59.03 Aligned_cols=22 Identities=14% Similarity=0.151 Sum_probs=19.2
Q ss_pred ccccceeecccccCCcEEEEeC
Q 009719 460 LVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 460 ~~~illEmDRILRP~G~~iird 481 (527)
+...|.||-|+|+|||.+|+.+
T Consensus 267 l~~aL~Ei~RvLKPGGrIVssE 288 (438)
T 3uwp_A 267 VDHQLKERFANMKEGGRIVSSK 288 (438)
T ss_dssp HHHHHHHHHTTSCTTCEEEESS
T ss_pred HHHHHHHHHHcCCCCcEEEEee
Confidence 3567789999999999999986
|
| >3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=90.58 E-value=0.083 Score=52.02 Aligned_cols=118 Identities=11% Similarity=0.131 Sum_probs=71.2
Q ss_pred hhhccCCCCeeeEeecCCCccchhhhccCC-C---eeEEEecCCCCCCchhHhh----hccccc---c-ccccCCCCCCC
Q 009719 365 LNVKLGTPAIRNIMDMNAFFGGFAAALTSD-P---VWVMNVVPARKSSTLSVIY----DRGLIG---V-YHDWCEPFSTY 432 (527)
Q Consensus 365 l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~-~---VwvMnvvp~~~~ntl~vi~----eRGLiG---~-~hdwce~fstY 432 (527)
+...+..+ -.|+|+|||.|-++.+|... + |+-+-+.| .-+..+- ..|+-. + ..|.-+.+.
T Consensus 15 i~~~v~~g--~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~----~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~-- 86 (244)
T 3gnl_A 15 VASYITKN--ERIADIGSDHAYLPCFAVKNQTASFAIAGEVVD----GPFQSAQKQVRSSGLTEQIDVRKGNGLAVIE-- 86 (244)
T ss_dssp HHTTCCSS--EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSH----HHHHHHHHHHHHTTCTTTEEEEECSGGGGCC--
T ss_pred HHHhCCCC--CEEEEECCccHHHHHHHHHhCCCCEEEEEECCH----HHHHHHHHHHHHcCCCceEEEEecchhhccC--
Confidence 44455555 47999999999999998654 3 33333332 2233332 235522 1 123333332
Q ss_pred CC-ccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCceeEE
Q 009719 433 PR-TYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 433 Pr-tyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~~~ 502 (527)
|. .||+|=..+. .+-.|..||-+.-+.|.|+|++|++-.. -...+++.+...-|.+.-
T Consensus 87 ~~~~~D~Iviagm-----------Gg~lI~~IL~~~~~~L~~~~~lIlq~~~-~~~~lr~~L~~~Gf~i~~ 145 (244)
T 3gnl_A 87 KKDAIDTIVIAGM-----------GGTLIRTILEEGAAKLAGVTKLILQPNI-AAWQLREWSEQNNWLITS 145 (244)
T ss_dssp GGGCCCEEEEEEE-----------CHHHHHHHHHHTGGGGTTCCEEEEEESS-CHHHHHHHHHHHTEEEEE
T ss_pred ccccccEEEEeCC-----------chHHHHHHHHHHHHHhCCCCEEEEEcCC-ChHHHHHHHHHCCCEEEE
Confidence 33 4786532221 1223456777888899999999999754 356788888888898743
|
| >3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A* | Back alignment and structure |
|---|
Probab=90.09 E-value=0.23 Score=49.93 Aligned_cols=54 Identities=15% Similarity=0.071 Sum_probs=39.3
Q ss_pred EEeeccccCCCCCCCcccEEEecCcc---cccccChH--HHHHHHhhcccCC-cEEEEec
Q 009719 181 FVAMLGTRRLPFPAFSFDIVHCSRCL---IPFTAYNA--TYLIEVDRLLRPG-GYLVISG 234 (527)
Q Consensus 181 ~~~v~dae~LPFpD~SFDlV~cs~~l---~hw~d~~~--~aL~Ei~RVLRPG-G~lviS~ 234 (527)
.....+++-..++++.||+|+|..+. ++|.|... .+|..+.++|||| |.|++..
T Consensus 125 i~~~~~~dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KV 184 (277)
T 3evf_A 125 ITFKDKTDIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKV 184 (277)
T ss_dssp EEEECSCCTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred EEEeccceehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEe
Confidence 33445556678889999999998743 23544433 2578889999999 9999965
|
| >3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A* | Back alignment and structure |
|---|
Probab=89.99 E-value=0.51 Score=45.73 Aligned_cols=108 Identities=13% Similarity=0.040 Sum_probs=65.2
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccc-cCCCCCCCcccEEEecCcccccccChHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGT-RRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~da-e~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
|..+.+|...+.. ..+...|.++..++.|+++ |+. +.+..+|. +.+|.. ..||+|+.+...-. .-...
T Consensus 27 G~l~i~la~~~~~-~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~-~~~D~IviaG~Gg~---~i~~I 101 (225)
T 3kr9_A 27 AYLPIELVERGQI-KSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEET-DQVSVITIAGMGGR---LIARI 101 (225)
T ss_dssp THHHHHHHHTTSE-EEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGG-GCCCEEEEEEECHH---HHHHH
T ss_pred HHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccC-cCCCEEEEcCCChH---HHHHH
Confidence 4444445555421 1233347788888888754 554 45666665 445432 26998886543211 11237
Q ss_pred HHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeeee
Q 009719 217 LIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAVD 264 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~~ 264 (527)
|.+....|+|||+|+++.- . .-..+.+......|....+.
T Consensus 102 l~~~~~~L~~~~~lVlq~~--~------~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 102 LEEGLGKLANVERLILQPN--N------REDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp HHHTGGGCTTCCEEEEEES--S------CHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHhCCCCEEEEECC--C------CHHHHHHHHHHCCCEEEEEE
Confidence 8899999999999999865 1 12345555566778887763
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 527 | ||||
| d1jqea_ | 280 | c.66.1.19 (A:) Histamine methyltransferase {Human | 0.002 |
| >d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 280 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Histamine methyltransferase domain: Histamine methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.7 bits (86), Expect = 0.002
Identities = 8/46 (17%), Positives = 13/46 (28%), Gaps = 1/46 (2%)
Query: 190 LPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235
+D +H + L AT LL ++I
Sbjct: 117 EKKELQKWDFIHMIQMLYYVKDIPATLK-FFHSLLGTNAKMLIIVV 161
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 527 | |||
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 99.24 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 99.22 | |
| d2avna1 | 246 | Hypothetical methyltransferase TM1389 {Thermotoga | 99.15 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 99.13 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 99.1 | |
| d1vlma_ | 208 | Possible histamine N-methyltransferase TM1293 {The | 99.08 | |
| d1p91a_ | 268 | rRNA methyltransferase RlmA {Escherichia coli [Tax | 99.03 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 98.97 | |
| d2p7ia1 | 225 | Hypothetical protein ECA1738 {Erwinia carotovora [ | 98.8 | |
| d2ex4a1 | 222 | Adrenal gland protein AD-003 (C9orf32) {Human (Hom | 98.78 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 98.74 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 98.73 | |
| d1xtpa_ | 254 | Hypothetical protein Lmaj004091aaa (LmjF30.0810) { | 98.63 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 98.61 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 98.59 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 98.55 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 98.54 | |
| d1vlma_ | 208 | Possible histamine N-methyltransferase TM1293 {The | 98.44 | |
| d1jqea_ | 280 | Histamine methyltransferase {Human (Homo sapiens) | 98.33 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 98.3 | |
| d2a14a1 | 257 | Indolethylamine N-methyltransferase, INMT {Human ( | 98.29 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 98.26 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 98.24 | |
| d1zx0a1 | 229 | Guanidinoacetate methyltransferase {Human (Homo sa | 98.23 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 98.21 | |
| d1kpia_ | 291 | CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | 98.16 | |
| d2fk8a1 | 280 | Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri | 98.12 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 98.09 | |
| d2avna1 | 246 | Hypothetical methyltransferase TM1389 {Thermotoga | 98.08 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 98.07 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 98.07 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 98.05 | |
| d2ex4a1 | 222 | Adrenal gland protein AD-003 (C9orf32) {Human (Hom | 98.05 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 98.0 | |
| d2p7ia1 | 225 | Hypothetical protein ECA1738 {Erwinia carotovora [ | 97.92 | |
| d1tw3a2 | 253 | Carminomycin 4-O-methyltransferase {Streptomyces p | 97.92 | |
| d2fk8a1 | 280 | Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri | 97.92 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 97.91 | |
| d2g72a1 | 263 | Phenylethanolamine N-methyltransferase, PNMTase {H | 97.91 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 97.91 | |
| d2a14a1 | 257 | Indolethylamine N-methyltransferase, INMT {Human ( | 97.9 | |
| d1kpia_ | 291 | CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | 97.87 | |
| d1p91a_ | 268 | rRNA methyltransferase RlmA {Escherichia coli [Tax | 97.86 | |
| d2fcaa1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil | 97.86 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 97.86 | |
| d1i9ga_ | 264 | Probable methyltransferase Rv2118c {Mycobacterium | 97.83 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 97.8 | |
| d1tw3a2 | 253 | Carminomycin 4-O-methyltransferase {Streptomyces p | 97.79 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 97.75 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 97.73 | |
| d1qzza2 | 256 | Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu | 97.73 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 97.72 | |
| d1xtpa_ | 254 | Hypothetical protein Lmaj004091aaa (LmjF30.0810) { | 97.71 | |
| d1jqea_ | 280 | Histamine methyltransferase {Human (Homo sapiens) | 97.69 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 97.65 | |
| d1yzha1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep | 97.63 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 97.61 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 97.6 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 97.52 | |
| d1qzza2 | 256 | Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu | 97.49 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 97.47 | |
| d1nw3a_ | 328 | Catalytic, N-terminal domain of histone methyltran | 97.45 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 97.43 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 97.42 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 97.42 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 97.41 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 97.39 | |
| d1zx0a1 | 229 | Guanidinoacetate methyltransferase {Human (Homo sa | 97.34 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 97.26 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 97.21 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 97.09 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 97.08 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 97.06 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 97.04 | |
| d2g72a1 | 263 | Phenylethanolamine N-methyltransferase, PNMTase {H | 97.02 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 96.96 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 96.91 | |
| d2fcaa1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil | 96.89 | |
| d1yzha1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep | 96.87 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 96.86 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 96.84 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 96.8 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 96.78 | |
| d1o54a_ | 266 | Hypothetical protein TM0748 {Thermotoga maritima [ | 96.75 | |
| d2b25a1 | 324 | Hypothetical protein FLJ20628 {Human (Homo sapiens | 96.67 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 96.49 | |
| d1af7a2 | 193 | Chemotaxis receptor methyltransferase CheR, C-term | 96.48 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 96.34 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 95.93 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 95.84 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 95.65 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 95.55 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 95.37 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 94.53 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 94.4 | |
| d1o54a_ | 266 | Hypothetical protein TM0748 {Thermotoga maritima [ | 93.93 | |
| d2avda1 | 219 | COMT domain-containing protein 1, COMTD1 {Human (H | 93.55 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 93.33 | |
| d2cl5a1 | 214 | Catechol O-methyltransferase, COMT {Rat (Rattus no | 93.13 | |
| d1eg2a_ | 279 | m.RsrI N6 adenosine-specific DNA methyltransferase | 93.07 | |
| d1fp1d2 | 244 | Chalcone O-methyltransferase {Alfalfa (Medicago sa | 92.94 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 92.87 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 92.72 | |
| d1fp1d2 | 244 | Chalcone O-methyltransferase {Alfalfa (Medicago sa | 92.48 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 92.24 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 92.05 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 92.01 | |
| d2frna1 | 260 | Hypothetical protein PH0793 {Pyrococcus horikoshii | 91.96 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 91.75 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 91.66 | |
| d1i9ga_ | 264 | Probable methyltransferase Rv2118c {Mycobacterium | 91.37 | |
| d2igta1 | 309 | Putative methyltransferase Atu0340 {Agrobacterium | 91.26 | |
| d1g60a_ | 256 | Methyltransferase mboII {Moraxella bovis [TaxId: 4 | 91.04 | |
| d2b25a1 | 324 | Hypothetical protein FLJ20628 {Human (Homo sapiens | 90.87 | |
| d2cl5a1 | 214 | Catechol O-methyltransferase, COMT {Rat (Rattus no | 90.69 | |
| d2frna1 | 260 | Hypothetical protein PH0793 {Pyrococcus horikoshii | 90.55 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 89.8 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 89.07 | |
| d1kyza2 | 243 | Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltra | 88.66 | |
| d1nw3a_ | 328 | Catalytic, N-terminal domain of histone methyltran | 88.19 | |
| d2b3ta1 | 274 | N5-glutamine methyltransferase, HemK {Escherichia | 87.17 | |
| d2b3ta1 | 274 | N5-glutamine methyltransferase, HemK {Escherichia | 87.01 | |
| d1fp2a2 | 244 | Isoflavone O-methyltransferase {Alfalfa (Medicago | 86.32 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 84.63 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 83.6 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 83.23 | |
| d1kyza2 | 243 | Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltra | 83.13 | |
| d1booa_ | 320 | m.PvuII N4 cytosine-specific DNA methyltransferase | 82.46 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 82.42 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 80.56 | |
| d1mjfa_ | 276 | Putative spermidine synthetase PF0127 (SpeE) {Arch | 80.48 |
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=99.24 E-value=2.8e-12 Score=118.42 Aligned_cols=89 Identities=18% Similarity=0.233 Sum_probs=71.1
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYL 217 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL 217 (527)
.|.++.+|.+++..+. ..|.++.|++.|+++ +.+ +.+.+++++.|||++++||+|+|..+++|+.+... +|
T Consensus 26 ~G~~~~~l~~~~~~v~---gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~~~~~~fD~v~~~~~l~~~~d~~~-~l 101 (231)
T d1vl5a_ 26 GGHVANAFAPFVKKVV---AFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAAHHFPNPAS-FV 101 (231)
T ss_dssp TCHHHHHHGGGSSEEE---EEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCGGGCSCHHH-HH
T ss_pred CcHHHHHHHHhCCEEE---EEECCHHHHhhhhhcccccccccccccccccccccccccccccccccccccccCCHHH-HH
Confidence 4555556677765443 348889999998754 444 56888999999999999999999999988877665 99
Q ss_pred HHHhhcccCCcEEEEecC
Q 009719 218 IEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~p 235 (527)
+|+.|+|||||+|++..+
T Consensus 102 ~~~~r~LkpgG~l~i~~~ 119 (231)
T d1vl5a_ 102 SEAYRVLKKGGQLLLVDN 119 (231)
T ss_dssp HHHHHHEEEEEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEEeC
Confidence 999999999999999764
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.22 E-value=4.6e-12 Score=118.53 Aligned_cols=89 Identities=21% Similarity=0.270 Sum_probs=71.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYL 217 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL 217 (527)
+|.++..|.+++.. +...|.|+.|++.|+++ +.+ ..+.++|++.+||++++||+|+|..+++|+++... +|
T Consensus 27 tG~~~~~la~~~~~---v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~d~~~-~l 102 (234)
T d1xxla_ 27 AGHTALAFSPYVQE---CIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAAHHFSDVRK-AV 102 (234)
T ss_dssp TSHHHHHHGGGSSE---EEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCGGGCSCHHH-HH
T ss_pred CcHHHHHHHHhCCe---EEEEeCChhhhhhhhhhhcccccccccccccccccccccccccceeeeeceeecccCHHH-HH
Confidence 45566666666543 34448889999988755 444 66788999999999999999999999988776655 99
Q ss_pred HHHhhcccCCcEEEEecC
Q 009719 218 IEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~p 235 (527)
+|+.|+|||||+++++..
T Consensus 103 ~~~~r~LkpgG~~~~~~~ 120 (234)
T d1xxla_ 103 REVARVLKQDGRFLLVDH 120 (234)
T ss_dssp HHHHHHEEEEEEEEEEEE
T ss_pred HHHHHeeCCCcEEEEEEc
Confidence 999999999999999754
|
| >d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical methyltransferase TM1389 species: Thermotoga maritima [TaxId: 2336]
Probab=99.15 E-value=1.2e-11 Score=114.20 Aligned_cols=88 Identities=22% Similarity=0.323 Sum_probs=70.4
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecC-cccccccChHHHHHHHh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSR-CLIPFTAYNATYLIEVD 221 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~-~l~hw~d~~~~aL~Ei~ 221 (527)
.|.++..|.+++..+..+ |.++.|++.|++++... +..++++.|||++++||+|+|.. +++|+++... +|+|+.
T Consensus 53 ~G~~~~~l~~~~~~v~gi---D~s~~~l~~a~~~~~~~-~~~~~~~~l~~~~~~fD~ii~~~~~~~~~~d~~~-~l~~i~ 127 (246)
T d2avna1 53 TGKWSLFLQERGFEVVLV---DPSKEMLEVAREKGVKN-VVEAKAEDLPFPSGAFEAVLALGDVLSYVENKDK-AFSEIR 127 (246)
T ss_dssp TCHHHHHHHTTTCEEEEE---ESCHHHHHHHHHHTCSC-EEECCTTSCCSCTTCEEEEEECSSHHHHCSCHHH-HHHHHH
T ss_pred CchhcccccccceEEEEe---ecccccccccccccccc-cccccccccccccccccceeeecchhhhhhhHHH-HHHHHH
Confidence 455555667777644444 88899999999997654 45689999999999999999865 6666666555 999999
Q ss_pred hcccCCcEEEEecC
Q 009719 222 RLLRPGGYLVISGP 235 (527)
Q Consensus 222 RVLRPGG~lviS~p 235 (527)
|+|||||+++++.+
T Consensus 128 r~Lk~gG~~ii~~~ 141 (246)
T d2avna1 128 RVLVPDGLLIATVD 141 (246)
T ss_dssp HHEEEEEEEEEEEE
T ss_pred hhcCcCcEEEEEEC
Confidence 99999999999986
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.13 E-value=1.8e-11 Score=111.62 Aligned_cols=90 Identities=21% Similarity=0.239 Sum_probs=70.9
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYL 217 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL 217 (527)
.|.++.+|.+.+..+ ...|.|+.|++.|+++ +....+..+|++.|||++++||+|+|..+++|+++.+ ..+|
T Consensus 48 ~G~~~~~la~~~~~v---~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~~~~~fD~I~~~~~l~~~~~~d~~~~l 124 (226)
T d1ve3a1 48 VGGFSFLLEDYGFEV---VGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFEPLELNQVF 124 (226)
T ss_dssp TSHHHHHHHHTTCEE---EEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGCCHHHHHHHH
T ss_pred cchhhhhHhhhhccc---ccccccccchhhhhhhhccccccccccccccccccccCcCceEEEEecchhhCChhHHHHHH
Confidence 344444556666643 3348889999998865 4556677789999999999999999999998886433 3599
Q ss_pred HHHhhcccCCcEEEEecC
Q 009719 218 IEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~p 235 (527)
+|+.|+|||||+|++..+
T Consensus 125 ~~i~~~LkpgG~lii~~~ 142 (226)
T d1ve3a1 125 KEVRRVLKPSGKFIMYFT 142 (226)
T ss_dssp HHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHcCcCcEEEEEEc
Confidence 999999999999999865
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=99.10 E-value=2.3e-11 Score=117.20 Aligned_cols=89 Identities=16% Similarity=0.186 Sum_probs=71.0
Q ss_pred hhccccccccC-CeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHH
Q 009719 143 VASFGGSMLSE-NILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNAT 215 (527)
Q Consensus 143 vgsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~ 215 (527)
.|.++.+|.++ +..++ ..|.++.|++.|+++ |+. +.+..++++.|||++++||+|+|..+++|+++...
T Consensus 78 ~G~~~~~la~~~~~~v~---gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~~~~sfD~V~~~~~l~h~~d~~~- 153 (282)
T d2o57a1 78 YGGAARFLVRKFGVSID---CLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLK- 153 (282)
T ss_dssp TSHHHHHHHHHHCCEEE---EEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSCHHH-
T ss_pred CcHHHhhhhccCCcEEE---EEeccchhhhhhhcccccccccccccccccccccccccccccchhhccchhhhccCHHH-
Confidence 34444555554 54433 347788999888765 553 56788999999999999999999999999987766
Q ss_pred HHHHHhhcccCCcEEEEecC
Q 009719 216 YLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p 235 (527)
+|.|+.|+|||||+|+++.+
T Consensus 154 ~l~~~~~~LkpgG~l~~~~~ 173 (282)
T d2o57a1 154 VFQECARVLKPRGVMAITDP 173 (282)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEEe
Confidence 99999999999999999875
|
| >d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Possible histamine N-methyltransferase TM1293 species: Thermotoga maritima [TaxId: 2336]
Probab=99.08 E-value=3.1e-11 Score=110.22 Aligned_cols=88 Identities=22% Similarity=0.291 Sum_probs=70.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDR 222 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~R 222 (527)
+|+-.|.++..-...+.+ |.++.|++.|++++ ..+.+++++.||+++++||+|+|..+++|+++... +|.|+.|
T Consensus 43 iGcG~G~~~~~~~~~~gi---D~s~~~~~~a~~~~--~~~~~~d~~~l~~~~~~fD~I~~~~~l~h~~d~~~-~l~~~~~ 116 (208)
T d1vlma_ 43 IGVGTGRFAVPLKIKIGV---EPSERMAEIARKRG--VFVLKGTAENLPLKDESFDFALMVTTICFVDDPER-ALKEAYR 116 (208)
T ss_dssp ETCTTSTTHHHHTCCEEE---ESCHHHHHHHHHTT--CEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHHH-HHHHHHH
T ss_pred ECCCCcccccccceEEEE---eCChhhcccccccc--ccccccccccccccccccccccccccccccccccc-chhhhhh
Confidence 565555544322222233 77889999999986 46677899999999999999999999999977655 9999999
Q ss_pred cccCCcEEEEecCC
Q 009719 223 LLRPGGYLVISGPP 236 (527)
Q Consensus 223 VLRPGG~lviS~pp 236 (527)
+|||||++++..+.
T Consensus 117 ~L~pgG~l~i~~~~ 130 (208)
T d1vlma_ 117 ILKKGGYLIVGIVD 130 (208)
T ss_dssp HEEEEEEEEEEEEC
T ss_pred cCCCCceEEEEecC
Confidence 99999999998874
|
| >d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA methyltransferase RlmA domain: rRNA methyltransferase RlmA species: Escherichia coli [TaxId: 562]
Probab=99.03 E-value=1e-10 Score=112.96 Aligned_cols=83 Identities=23% Similarity=0.368 Sum_probs=67.8
Q ss_pred hhccccccccC--CeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHH
Q 009719 143 VASFGGSMLSE--NILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEV 220 (527)
Q Consensus 143 vgsfga~Ll~r--~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei 220 (527)
.|.+...|.++ ++.++.+ |.++.|++.|+++...+.+.++|+++|||++++||+|+|..+.+| +.|+
T Consensus 95 ~G~~~~~l~~~~~~~~~~gi---D~s~~~~~~a~~~~~~~~~~~~d~~~l~~~~~sfD~v~~~~~~~~--------~~e~ 163 (268)
T d1p91a_ 95 EGYYTHAFADALPEITTFGL---DVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCK--------AEEL 163 (268)
T ss_dssp TSTTHHHHHHTCTTSEEEEE---ESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCCCC--------HHHH
T ss_pred CcHHHHHHHHHCCCCEEEEe---cchHhhhhhhhcccccccceeeehhhccCCCCCEEEEeecCCHHH--------HHHH
Confidence 34444455555 4444444 888999999999887788899999999999999999999877644 6899
Q ss_pred hhcccCCcEEEEecCC
Q 009719 221 DRLLRPGGYLVISGPP 236 (527)
Q Consensus 221 ~RVLRPGG~lviS~pp 236 (527)
.|||||||+|++++|.
T Consensus 164 ~rvLkpgG~l~~~~p~ 179 (268)
T d1p91a_ 164 ARVVKPGGWVITATPG 179 (268)
T ss_dssp HHHEEEEEEEEEEEEC
T ss_pred HHHhCCCcEEEEEeeC
Confidence 9999999999999983
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=98.97 E-value=2e-10 Score=108.15 Aligned_cols=87 Identities=15% Similarity=0.185 Sum_probs=69.0
Q ss_pred hccccccccC-CeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 144 ASFGGSMLSE-NILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 144 gsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
|.++.+|..+ +..+..+ |.+++|++.|+++ |+. +.+.++|++.+ +++++||+|+|..+++|+.+... +
T Consensus 45 G~~~~~la~~~~~~v~Gv---D~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~-~~~~~fD~v~~~~~~~~~~d~~~-~ 119 (245)
T d1nkva_ 45 GEMLCTWARDHGITGTGI---DMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY-VANEKCDVAACVGATWIAGGFAG-A 119 (245)
T ss_dssp CHHHHHHHHHTCCEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC-CCSSCEEEEEEESCGGGTSSSHH-H
T ss_pred CHHHHHHHHhcCCEEEEE---ecccchhhHHHHHHHHhhccccchhhhhHHhhc-cccCceeEEEEEehhhccCCHHH-H
Confidence 3344444433 5554444 8889999988765 554 56788899888 57899999999999999988776 9
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
|.|+.|+|||||+++++.+
T Consensus 120 l~~~~r~LkPGG~l~i~~~ 138 (245)
T d1nkva_ 120 EELLAQSLKPGGIMLIGEP 138 (245)
T ss_dssp HHHHTTSEEEEEEEEEEEE
T ss_pred HHHHHHHcCcCcEEEEEec
Confidence 9999999999999999875
|
| >d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein ECA1738 species: Erwinia carotovora [TaxId: 554]
Probab=98.80 E-value=2.2e-09 Score=99.98 Aligned_cols=89 Identities=15% Similarity=0.100 Sum_probs=70.3
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVD 221 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~ 221 (527)
.|.++..|.+++..+..+ |.++++++.|+++... ..+..++.+.+++ +++||+|+|..+++|..+... +|.|+.
T Consensus 31 ~G~~~~~l~~~g~~v~gi---D~s~~~i~~a~~~~~~~~~~~~~~~~~~~~-~~~fD~I~~~~vleh~~d~~~-~l~~i~ 105 (225)
T d2p7ia1 31 KGDFTSRLQEHFNDITCV---EASEEAISHAQGRLKDGITYIHSRFEDAQL-PRRYDNIVLTHVLEHIDDPVA-LLKRIN 105 (225)
T ss_dssp TSHHHHHHTTTCSCEEEE---ESCHHHHHHHHHHSCSCEEEEESCGGGCCC-SSCEEEEEEESCGGGCSSHHH-HHHHHH
T ss_pred CcHHHHHHHHcCCeEEEE---eCcHHHhhhhhccccccccccccccccccc-ccccccccccceeEecCCHHH-HHHHHH
Confidence 456666666666544444 7788999999987543 5566778888886 589999999999999876655 999997
Q ss_pred -hcccCCcEEEEecCC
Q 009719 222 -RLLRPGGYLVISGPP 236 (527)
Q Consensus 222 -RVLRPGG~lviS~pp 236 (527)
|||||||+++++.|.
T Consensus 106 ~~~Lk~gG~l~i~~pn 121 (225)
T d2p7ia1 106 DDWLAEGGRLFLVCPN 121 (225)
T ss_dssp HTTEEEEEEEEEEEEC
T ss_pred HHhcCCCceEEEEeCC
Confidence 999999999999874
|
| >d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Adrenal gland protein AD-003 (C9orf32) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.78 E-value=1.5e-09 Score=100.62 Aligned_cols=91 Identities=16% Similarity=0.125 Sum_probs=71.3
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC----CC-cEEeeccccCCCCCCCcccEEEecCcccccccCh-HHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG----IP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg----~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~a 216 (527)
.|.++.+|+.+... .+...|.++.|++.|+++. .+ ..+.++|++.+++++++||+|+|..+++|+++.. ..+
T Consensus 71 ~G~~~~~l~~~~~~--~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~~~~~~~fD~I~~~~~l~h~~~~~~~~~ 148 (222)
T d2ex4a1 71 IGRITKRLLLPLFR--EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEF 148 (222)
T ss_dssp TTHHHHHTTTTTCS--EEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHH
T ss_pred CCHhhHHHHHhcCC--EEEEeecCHHHhhccccccccccccccccccccccccccccccccccccccccccchhhhhhhH
Confidence 34445566665443 2333488999999998873 22 3577889999999999999999999999988754 349
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
|.++.|+|||||+++++.+
T Consensus 149 l~~i~~~Lk~~G~~~i~~~ 167 (222)
T d2ex4a1 149 LRRCKGSLRPNGIIVIKDN 167 (222)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHhcCCcceEEEEEc
Confidence 9999999999999999864
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.74 E-value=3.5e-09 Score=98.48 Aligned_cols=88 Identities=16% Similarity=0.174 Sum_probs=66.3
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCc-ccccccC-hHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRC-LIPFTAY-NATYL 217 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~-l~hw~d~-~~~aL 217 (527)
|.++..|..++..+ ...|.+++|++.|+++ +....+.++|++.||++ +.||+|+|... ++|+... ...+|
T Consensus 53 G~~~~~l~~~~~~v---~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~~~-~~fD~I~~~~~~~~~~~~~~~~~~L 128 (251)
T d1wzna1 53 GIPTLELAERGYEV---VGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYFDEEDLRKLF 128 (251)
T ss_dssp CHHHHHHHHTTCEE---EEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGGSCHHHHHHHH
T ss_pred CccchhhcccceEE---EEEeeccccccccccccccccccchheehhhhhcccc-cccchHhhhhhhhhcCChHHHHHHH
Confidence 44444555666643 3448889999998865 55678899999999998 58999999864 4444322 23599
Q ss_pred HHHhhcccCCcEEEEecC
Q 009719 218 IEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~p 235 (527)
.++.|+|||||+|+++.+
T Consensus 129 ~~~~~~LkpgG~lii~~~ 146 (251)
T d1wzna1 129 SKVAEALKPGGVFITDFP 146 (251)
T ss_dssp HHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHcCCCcEEEEEec
Confidence 999999999999999876
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=98.73 E-value=2.2e-09 Score=103.88 Aligned_cols=70 Identities=19% Similarity=0.242 Sum_probs=60.5
Q ss_pred cChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++++++.|+++ +....+.++|++.+|+++ +||+|+|..+++|+++... +|+++.|+|||||++++..|
T Consensus 59 D~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~~~~~-~fD~v~~~~~l~~~~d~~~-~l~~~~~~LkpgG~lii~~~ 132 (281)
T d2gh1a1 59 DSGETLLAEARELFRLLPYDSEFLEGDATEIELND-KYDIAICHAFLLHMTTPET-MLQKMIHSVKKGGKIICFEP 132 (281)
T ss_dssp ECCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSS-CEEEEEEESCGGGCSSHHH-HHHHHHHTEEEEEEEEEEEC
T ss_pred ecchhHhhhhhcccccccccccccccccccccccC-CceEEEEehhhhcCCCHHH-HHHHHHHHcCcCcEEEEEEC
Confidence 7788999999865 344667888999999974 7999999999988887665 99999999999999999886
|
| >d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810) species: Leishmania major [TaxId: 5664]
Probab=98.63 E-value=5.2e-09 Score=100.18 Aligned_cols=91 Identities=13% Similarity=0.248 Sum_probs=70.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC--CC-cEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG--IP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLI 218 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg--~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~ 218 (527)
.|.++.+|+.+... .+...|.++.|++.|+++. .+ ..+.+++.+.+++++++||+|+|..+++|+++++ ..+|+
T Consensus 104 ~G~~t~~ll~~~~~--~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I~~~~vl~hl~d~d~~~~l~ 181 (254)
T d1xtpa_ 104 IGRITKNLLTKLYA--TTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIYLTDADFVKFFK 181 (254)
T ss_dssp TTHHHHHTHHHHCS--EEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHH
T ss_pred CChhhHHHHhhcCc--eEEEEcCCHHHHHhhhccccccccceeEEccccccccCCCccceEEeeccccccchhhhHHHHH
Confidence 44455566655332 2223377889999999873 23 4567789999999999999999999999998765 34899
Q ss_pred HHhhcccCCcEEEEecC
Q 009719 219 EVDRLLRPGGYLVISGP 235 (527)
Q Consensus 219 Ei~RVLRPGG~lviS~p 235 (527)
++.|+|||||+++++.+
T Consensus 182 ~~~~~LkpgG~iii~e~ 198 (254)
T d1xtpa_ 182 HCQQALTPNGYIFFKEN 198 (254)
T ss_dssp HHHHHEEEEEEEEEEEE
T ss_pred HHHHhcCCCcEEEEEec
Confidence 99999999999999765
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=98.61 E-value=1e-08 Score=96.83 Aligned_cols=84 Identities=19% Similarity=0.211 Sum_probs=64.5
Q ss_pred cccCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCCC-CCCcccEEEecCcccccccCh---HHHHHH
Q 009719 150 MLSENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLPF-PAFSFDIVHCSRCLIPFTAYN---ATYLIE 219 (527)
Q Consensus 150 Ll~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LPF-pD~SFDlV~cs~~l~hw~d~~---~~aL~E 219 (527)
+.+.+.. .+...|.|+.|++.|++| +. .+.+.++|+..+++ .+++||+|+|..+++|..+.. ..+|.+
T Consensus 42 ~~~~~~~--~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~ 119 (252)
T d1ri5a_ 42 YERAGIG--EYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSFHYAFSTSESLDIAQRN 119 (252)
T ss_dssp HHHHTCS--EEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCGGGGGSSHHHHHHHHHH
T ss_pred HHHcCCC--eEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcccccccceEEEEcceeeecCCCHHHHHHHHHH
Confidence 3344542 233448889999999876 22 35677889888887 588999999999998876543 259999
Q ss_pred HhhcccCCcEEEEecC
Q 009719 220 VDRLLRPGGYLVISGP 235 (527)
Q Consensus 220 i~RVLRPGG~lviS~p 235 (527)
+.|+|||||+|+++.|
T Consensus 120 i~~~Lk~gG~~i~~~~ 135 (252)
T d1ri5a_ 120 IARHLRPGGYFIMTVP 135 (252)
T ss_dssp HHHTEEEEEEEEEEEE
T ss_pred HhceeCCCCEEEEEec
Confidence 9999999999999887
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=98.59 E-value=2.8e-08 Score=90.31 Aligned_cols=89 Identities=15% Similarity=0.240 Sum_probs=69.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccCh-HHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~a 216 (527)
.|..+.+|.+++..+..+ |.++.|++.|+++ +++ ..+...|...+++ +++||+|+|..+++|++... ..+
T Consensus 41 ~G~~~~~la~~g~~v~gv---D~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~I~~~~~~~~~~~~~~~~~ 116 (198)
T d2i6ga1 41 NGRNSLYLAANGYDVTAW---DKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF-DGEYDFILSTVVMMFLEAQTIPGL 116 (198)
T ss_dssp TSHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC-CCCEEEEEEESCGGGSCTTHHHHH
T ss_pred CCHHHHHHHHHhhhhccc---cCcHHHHHHHHHHhhhccccchhhhheecccccc-cccccEEEEeeeeecCCHHHHHHH
Confidence 455556778888755444 8888999877643 555 3566678888887 68999999999999887654 359
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
|.++.|+|||||++++...
T Consensus 117 l~~~~~~L~pgG~~~~~~~ 135 (198)
T d2i6ga1 117 IANMQRCTKPGGYNLIVAA 135 (198)
T ss_dssp HHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCcEEEEEEe
Confidence 9999999999999999653
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=98.55 E-value=4.1e-08 Score=90.80 Aligned_cols=77 Identities=16% Similarity=0.083 Sum_probs=56.9
Q ss_pred eccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEec
Q 009719 160 FAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 160 iAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~ 234 (527)
+...|.|+.|++.|+++ +....+....+..++++...||+|+|+.+++|++..+ ..+|+||.|+|||||.|+++.
T Consensus 68 v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~ 147 (225)
T d1im8a_ 68 IIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEIKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE 147 (225)
T ss_dssp EEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCCCCSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhccccccceeeEEeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence 33348899999999875 2333333333444566777899999999987775333 359999999999999999987
Q ss_pred CC
Q 009719 235 PP 236 (527)
Q Consensus 235 pp 236 (527)
+.
T Consensus 148 ~~ 149 (225)
T d1im8a_ 148 KF 149 (225)
T ss_dssp EC
T ss_pred cc
Confidence 63
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=98.54 E-value=5e-08 Score=91.06 Aligned_cols=89 Identities=16% Similarity=0.225 Sum_probs=67.2
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecC-cccccccCh--HH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSR-CLIPFTAYN--AT 215 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~-~l~hw~d~~--~~ 215 (527)
.|.++..|.+++..+.. .|.|++|++.|+++ +.++.+.++|+..++++ ++||+|+|.. ++.|+.... ..
T Consensus 48 ~G~~~~~l~~~g~~v~G---vD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~i~~~~~~~~~~~~~~~~~~ 123 (246)
T d1y8ca_ 48 TGNLTENLCPKFKNTWA---VDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDSTNYIIDSDDLKK 123 (246)
T ss_dssp TSTTHHHHGGGSSEEEE---ECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTGGGGCCSHHHHHH
T ss_pred CCHHHHHHHHhCCccEe---eccchhhhhhccccccccCccceeeccchhhhccc-ccccccceeeeeeeccCCHHHHHH
Confidence 34455566677765444 48899999999875 66788888999998875 6899999874 555554332 34
Q ss_pred HHHHHhhcccCCcEEEEecC
Q 009719 216 YLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p 235 (527)
+|+++.|.|||||.|++...
T Consensus 124 ~l~~~~~~LkpgG~~i~~~~ 143 (246)
T d1y8ca_ 124 YFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp HHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHhCCCCeEEEEEeC
Confidence 99999999999999998653
|
| >d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Possible histamine N-methyltransferase TM1293 species: Thermotoga maritima [TaxId: 2336]
Probab=98.44 E-value=3.5e-08 Score=89.52 Aligned_cols=89 Identities=17% Similarity=0.223 Sum_probs=69.4
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCC-CCchhHhhhccccccccccCCCCCCCCCccchhhhcCccccccCCCCC
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARK-SSTLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSN 454 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~-~ntl~vi~eRGLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~ 454 (527)
.|||+|||+|.|+..|... ..| |- ++.+.++-+|++ -.+....+.++..+.+||+|++..++....
T Consensus 39 ~vLDiGcG~G~~~~~~~~~----~gi---D~s~~~~~~a~~~~~-~~~~~d~~~l~~~~~~fD~I~~~~~l~h~~----- 105 (208)
T d1vlma_ 39 RGVEIGVGTGRFAVPLKIK----IGV---EPSERMAEIARKRGV-FVLKGTAENLPLKDESFDFALMVTTICFVD----- 105 (208)
T ss_dssp CEEEETCTTSTTHHHHTCC----EEE---ESCHHHHHHHHHTTC-EEEECBTTBCCSCTTCEEEEEEESCGGGSS-----
T ss_pred eEEEECCCCcccccccceE----EEE---eCChhhccccccccc-cccccccccccccccccccccccccccccc-----
Confidence 5999999999999998642 232 33 477888888875 344555666665569999999999988764
Q ss_pred CCCCcccccceeecccccCCcEEEEeC
Q 009719 455 KNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 455 ~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+...+|-|+-|+|+|||.+++.+
T Consensus 106 ----d~~~~l~~~~~~L~pgG~l~i~~ 128 (208)
T d1vlma_ 106 ----DPERALKEAYRILKKGGYLIVGI 128 (208)
T ss_dssp ----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----ccccchhhhhhcCCCCceEEEEe
Confidence 25779999999999999999974
|
| >d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Histamine methyltransferase domain: Histamine methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.33 E-value=7.6e-08 Score=91.67 Aligned_cols=75 Identities=15% Similarity=-0.038 Sum_probs=56.4
Q ss_pred eccCcChHHHHHHHHHcC-----CC-cE--Eeeccc------cCCCCCCCcccEEEecCcccccccChHHHHHHHhhccc
Q 009719 160 FAPRDSHKAQIQFALERG-----IP-AF--VAMLGT------RRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLR 225 (527)
Q Consensus 160 iAp~D~seaqvq~A~eRg-----~p-a~--~~v~da------e~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLR 225 (527)
+...|.++.|++.|+++- ++ +. +....+ ...++++++||+|+|.++++|+.+... +|+++.|+||
T Consensus 73 ~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~I~~~~~l~~~~d~~~-~l~~l~~~Lk 151 (280)
T d1jqea_ 73 NEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPA-TLKFFHSLLG 151 (280)
T ss_dssp EEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHHTTSSSCCCEEEEEEESCGGGCSCHHH-HHHHHHHTEE
T ss_pred EEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchhcccCCCCceeEEEEccceecCCCHHH-HHHHHHhhCC
Confidence 344488999999998762 12 11 222222 235789999999999999988876555 9999999999
Q ss_pred CCcEEEEecC
Q 009719 226 PGGYLVISGP 235 (527)
Q Consensus 226 PGG~lviS~p 235 (527)
|||++++..+
T Consensus 152 pgG~l~i~~~ 161 (280)
T d1jqea_ 152 TNAKMLIIVV 161 (280)
T ss_dssp EEEEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 9999999865
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=98.30 E-value=1.3e-07 Score=83.20 Aligned_cols=89 Identities=7% Similarity=-0.078 Sum_probs=68.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC-----------------CCcEEeeccccCCCC-CCCcccEEEecC
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG-----------------IPAFVAMLGTRRLPF-PAFSFDIVHCSR 204 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg-----------------~pa~~~v~dae~LPF-pD~SFDlV~cs~ 204 (527)
+|..+.+|..+|..+..+ |.|+.|++.|+++. ....+..++...|+. +..+||+|+++.
T Consensus 31 ~G~~a~~la~~G~~V~gv---D~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~D~i~~~~ 107 (201)
T d1pjza_ 31 KSQDMSWLSGQGYHVVGA---ELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGHCAAFYDRA 107 (201)
T ss_dssp CSHHHHHHHHHCCEEEEE---EECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHSEEEEEEES
T ss_pred CCHHHHHHHHcCCceEee---cccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccccccceeEEEEEe
Confidence 455566778888765555 88999999999862 122455667777764 578999999999
Q ss_pred cccccccCh-HHHHHHHhhcccCCcEEEEec
Q 009719 205 CLIPFTAYN-ATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 205 ~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~ 234 (527)
+++|..+.. ..++.++.|+|||||++++..
T Consensus 108 ~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~ 138 (201)
T d1pjza_ 108 AMIALPADMRERYVQHLEALMPQACSGLLIT 138 (201)
T ss_dssp CGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred eeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence 998877543 359999999999999988754
|
| >d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Indolethylamine N-methyltransferase, INMT species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.29 E-value=1.3e-07 Score=87.95 Aligned_cols=75 Identities=16% Similarity=0.044 Sum_probs=53.1
Q ss_pred cCCCCCCCcccEEEecCcccccccCh---HHHHHHHhhcccCCcEEEEecCCCCCC---------CchhHHHHHHHHHHh
Q 009719 188 RRLPFPAFSFDIVHCSRCLIPFTAYN---ATYLIEVDRLLRPGGYLVISGPPVQWP---------KQDKEWADLQAVARA 255 (527)
Q Consensus 188 e~LPFpD~SFDlV~cs~~l~hw~d~~---~~aL~Ei~RVLRPGG~lviS~pp~~~~---------~~~~~w~~i~~l~~~ 255 (527)
...|+++++||+|+|..+++|..... ..+++++.|+|||||+|++++...... ......+.++++.+.
T Consensus 144 ~~~~~~~~~fD~i~~~~~l~~~~~~~~~~~~~l~~i~~~LkpGG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 223 (257)
T d2a14a1 144 PLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLD 223 (257)
T ss_dssp TTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHH
T ss_pred ccccccCCcccEEeehhhHHHhcccHHHHHHHHHHHHhccCCCcEEEEEEecccccceeccccccccCCCHHHHHHHHHH
Confidence 34589999999999999999986432 349999999999999999987532110 011234566666666
Q ss_pred cceEEee
Q 009719 256 LCYELIA 262 (527)
Q Consensus 256 mcW~~~~ 262 (527)
--++.+.
T Consensus 224 aGf~v~~ 230 (257)
T d2a14a1 224 AGFDIEQ 230 (257)
T ss_dssp TTEEEEE
T ss_pred CCCEEEE
Confidence 6666443
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.26 E-value=5.4e-07 Score=83.74 Aligned_cols=89 Identities=11% Similarity=-0.049 Sum_probs=68.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC----------------------CCcEEeeccccCC-CCCCCcccE
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG----------------------IPAFVAMLGTRRL-PFPAFSFDI 199 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg----------------------~pa~~~v~dae~L-PFpD~SFDl 199 (527)
.|..+.+|.++|..++.| |.|+.+|+.|+++. ..+.+.++|...| ++.+++||+
T Consensus 56 ~G~~a~~LA~~G~~V~gv---D~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~fd~ 132 (229)
T d2bzga1 56 KAVEMKWFADRGHSVVGV---EISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFDLPRTNIGKFDM 132 (229)
T ss_dssp TCTHHHHHHHTTCEEEEE---CSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGGGGGSCCCCEEE
T ss_pred CcHHHHHHHhCCCcEEEE---eCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhhccccccCceeE
Confidence 344466778888866555 88999999888652 1344566777666 467899999
Q ss_pred EEecCcccccccCh-HHHHHHHhhcccCCcEEEEec
Q 009719 200 VHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 200 V~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|+...+++|++... ..++.++.|+|||||++++.+
T Consensus 133 i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~ 168 (229)
T d2bzga1 133 IWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCV 168 (229)
T ss_dssp EEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEE
Confidence 99999999987554 359999999999999988865
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=98.24 E-value=1.6e-07 Score=85.92 Aligned_cols=94 Identities=15% Similarity=0.191 Sum_probs=63.3
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCCCCchhHh----hhccc--cccccccCCCCCCCC-CccchhhhcCccccc
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVI----YDRGL--IGVYHDWCEPFSTYP-RTYDLIHVSGIESLI 448 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~ntl~vi----~eRGL--iG~~hdwce~fstYP-rtyDLiHa~~~fs~~ 448 (527)
.|||+|||.|.|+.+|.+..--|.-|=+. ++.+..+ .+.|+ +-.++.=.+.++ +| .+||+|+|..++.+.
T Consensus 18 rVLDiGcG~G~~~~~l~~~~~~v~gvD~s--~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-~~~~~fD~v~~~~~l~~~ 94 (231)
T d1vl5a_ 18 EVLDVATGGGHVANAFAPFVKKVVAFDLT--EDILKVARAFIEGNGHQQVEYVQGDAEQMP-FTDERFHIVTCRIAAHHF 94 (231)
T ss_dssp EEEEETCTTCHHHHHHGGGSSEEEEEESC--HHHHHHHHHHHHHTTCCSEEEEECCC-CCC-SCTTCEEEEEEESCGGGC
T ss_pred EEEEecccCcHHHHHHHHhCCEEEEEECC--HHHHhhhhhccccccccccccccccccccc-cccccccccccccccccc
Confidence 69999999999999987765444333221 1333332 23444 223322234444 44 899999999888765
Q ss_pred cCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 449 KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 449 ~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
. +...+|-|+-|+|+|||+++|.+
T Consensus 95 ~---------d~~~~l~~~~r~LkpgG~l~i~~ 118 (231)
T d1vl5a_ 95 P---------NPASFVSEAYRVLKKGGQLLLVD 118 (231)
T ss_dssp S---------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred C---------CHHHHHHHHHHhcCCCcEEEEEe
Confidence 3 35789999999999999999974
|
| >d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Guanidinoacetate methyltransferase domain: Guanidinoacetate methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.23 E-value=1.3e-07 Score=88.55 Aligned_cols=89 Identities=17% Similarity=0.040 Sum_probs=62.1
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC----CCcEEeeccc--cCCCCCCCcccEEE-----ecCccccccc
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG----IPAFVAMLGT--RRLPFPAFSFDIVH-----CSRCLIPFTA 211 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg----~pa~~~v~da--e~LPFpD~SFDlV~-----cs~~l~hw~d 211 (527)
.|.++.++.+.+.. ++...|.++.|++.|+++. ....+...++ ...++++++||.|. +...+.|+.+
T Consensus 64 ~G~~a~~~a~~~~~--~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~fD~~~~~~~~~~~~~ 141 (229)
T d1zx0a1 64 MAIAASKVQEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQ 141 (229)
T ss_dssp TSHHHHHHHTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHH
T ss_pred chHHHHHHHHcCCC--eEEEeCCCHHHHHHHHHHhhhcccccccccccccccccccccccccceeecccccccccccccC
Confidence 34445566665543 4455588899999998763 2233344443 34578899999887 4567777776
Q ss_pred ChHHHHHHHhhcccCCcEEEEec
Q 009719 212 YNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 212 ~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
... +++|+.|+|||||+|++..
T Consensus 142 ~~~-~~~~~~r~LkpGG~~~~~~ 163 (229)
T d1zx0a1 142 FNF-IKNHAFRLLKPGGVLTYCN 163 (229)
T ss_dssp HHH-HHHTHHHHEEEEEEEEECC
T ss_pred HHH-HHHHHHHHcCCCcEEEEEe
Confidence 655 9999999999999999854
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.21 E-value=2.4e-07 Score=89.12 Aligned_cols=89 Identities=19% Similarity=0.296 Sum_probs=61.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCc-----EEeeccc----cCCCCCCCcccEEEecC-cccc
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPA-----FVAMLGT----RRLPFPAFSFDIVHCSR-CLIP 208 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa-----~~~v~da----e~LPFpD~SFDlV~cs~-~l~h 208 (527)
.|.++..|.++|..+. ..|.|+.|++.|+++ +... .+..++. ..+|+ .++||+|+|.. ++.|
T Consensus 67 ~G~~~~~la~~g~~v~---gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~fd~v~~~~~~~~~ 142 (292)
T d1xvaa_ 67 TGVDSIMLVEEGFSVT---SVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPA-GDGFDAVICLGNSFAH 142 (292)
T ss_dssp TSHHHHHHHHTTCEEE---EEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCC-TTCEEEEEECSSCGGG
T ss_pred CcHHHHHHHHcCCeee---eccCchHHHHHHHHHHHhcccccccceeeeeeccccccccccCC-CCCceEEEEecCchhh
Confidence 5666667778876444 448899999999764 2221 1222222 23444 46899999864 6778
Q ss_pred cccC------hHHHHHHHhhcccCCcEEEEecC
Q 009719 209 FTAY------NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 209 w~d~------~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+++. ...+|+|+.|+|||||+|+++..
T Consensus 143 ~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 175 (292)
T d1xvaa_ 143 LPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 175 (292)
T ss_dssp SCCTTSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cCCcccChHHHHHHHHHHHHHcCcCcEEEEeec
Confidence 7542 23599999999999999999765
|
| >d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA2 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.16 E-value=8e-07 Score=87.15 Aligned_cols=88 Identities=9% Similarity=0.021 Sum_probs=62.7
Q ss_pred hhcccccccc-CCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccCh----
Q 009719 143 VASFGGSMLS-ENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN---- 213 (527)
Q Consensus 143 vgsfga~Ll~-r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~---- 213 (527)
.|+++.++.+ .|+.+..+ ++|+.|++.|+++ |+...+.. .....++++++||.|+|-.++.|+.+..
T Consensus 72 ~G~~~~~~a~~~g~~v~gi---t~s~~q~~~a~~~~~~~~l~~~v~~-~~~d~~~~~~~fD~i~sie~~eH~~~~~~~~~ 147 (291)
T d1kpia_ 72 WGSTMRHAVAEYDVNVIGL---TLSENQYAHDKAMFDEVDSPRRKEV-RIQGWEEFDEPVDRIVSLGAFEHFADGAGDAG 147 (291)
T ss_dssp TSHHHHHHHHHHCCEEEEE---ESCHHHHHHHHHHHHHSCCSSCEEE-EECCGGGCCCCCSEEEEESCGGGTTCCSSCCS
T ss_pred chHHHHHHHHhcCcceeec---cchHHHHHHHHHHHHhhccchhhhh-hhhcccccccccceEeechhHHhcchhhhhhH
Confidence 4555556653 46655555 5678888887654 55432221 2223468899999999999999998642
Q ss_pred ----HHHHHHHhhcccCCcEEEEec
Q 009719 214 ----ATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 214 ----~~aL~Ei~RVLRPGG~lviS~ 234 (527)
..+|+++.|+|||||++++.+
T Consensus 148 ~~~~~~~f~~i~~~LkpgG~~~l~~ 172 (291)
T d1kpia_ 148 FERYDTFFKKFYNLTPDDGRMLLHT 172 (291)
T ss_dssp TTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEE
Confidence 349999999999999999865
|
| >d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Methoxy mycolic acid synthase 4, Mma4 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.12 E-value=1.4e-06 Score=84.64 Aligned_cols=86 Identities=10% Similarity=0.096 Sum_probs=61.5
Q ss_pred hhccccccccC-CeeEEeeccCcChHHHHHHHHHc----CCCc--EEeeccccCCCCCCCcccEEEecCcccccccCh-H
Q 009719 143 VASFGGSMLSE-NILTLSFAPRDSHKAQIQFALER----GIPA--FVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-A 214 (527)
Q Consensus 143 vgsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eR----g~pa--~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~ 214 (527)
.|+++.++..+ |..+..+ +.|++|++.|+++ |+.. .+...|...+ +++||.|++..+++|+.+.. .
T Consensus 63 ~G~~a~~~a~~~g~~v~gi---~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~~~~---~~~fD~i~si~~~eh~~~~~~~ 136 (280)
T d2fk8a1 63 WGTTMRRAVERFDVNVIGL---TLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF---AEPVDRIVSIEAFEHFGHENYD 136 (280)
T ss_dssp TSHHHHHHHHHHCCEEEEE---ESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC---CCCCSEEEEESCGGGTCGGGHH
T ss_pred chHHHHHHHHhCceeEEEe---cchHHHHHHHHHHHHhhccccchhhhhhhhhhh---ccchhhhhHhhHHHHhhhhhHH
Confidence 45555565544 5544444 6788999988765 4442 3333444433 47899999999999997653 3
Q ss_pred HHHHHHhhcccCCcEEEEec
Q 009719 215 TYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 215 ~aL~Ei~RVLRPGG~lviS~ 234 (527)
.+|+++.|+|||||++++.+
T Consensus 137 ~~f~~i~~~LkpgG~~~i~~ 156 (280)
T d2fk8a1 137 DFFKRCFNIMPADGRMTVQS 156 (280)
T ss_dssp HHHHHHHHHSCTTCEEEEEE
T ss_pred HHHHHHHhccCCCceEEEEE
Confidence 49999999999999999965
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.09 E-value=3.2e-07 Score=82.84 Aligned_cols=110 Identities=16% Similarity=0.199 Sum_probs=70.6
Q ss_pred HHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cccccccccCCC---C
Q 009719 358 VAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLIGVYHDWCEP---F 429 (527)
Q Consensus 358 v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLiG~~hdwce~---f 429 (527)
+......+.+.+..+. .|||+|||.|.++..|.+... +|+-.|-. +.+..+-++ |+.-.+ .|.. +
T Consensus 24 ~~~~~~~~~~~l~~~~--~ILDiGcG~G~~~~~la~~~~---~v~giD~S~~~i~~ak~~~~~~~~~~~~--~~~d~~~l 96 (226)
T d1ve3a1 24 IETLEPLLMKYMKKRG--KVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEF--IVGDARKL 96 (226)
T ss_dssp HHHHHHHHHHSCCSCC--EEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEE--EECCTTSC
T ss_pred HHHHHHHHHHhcCCCC--EEEEECCCcchhhhhHhhhhc---ccccccccccchhhhhhhhccccccccc--cccccccc
Confidence 3333444433344442 589999999999999987764 23333433 666655543 321111 2221 2
Q ss_pred CCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 430 STYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 430 stYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+-...+||+|.|..++..+. .-++..+|-|+-|+|+|||.++|..
T Consensus 97 ~~~~~~fD~I~~~~~l~~~~-------~~d~~~~l~~i~~~LkpgG~lii~~ 141 (226)
T d1ve3a1 97 SFEDKTFDYVIFIDSIVHFE-------PLELNQVFKEVRRVLKPSGKFIMYF 141 (226)
T ss_dssp CSCTTCEEEEEEESCGGGCC-------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCcCceEEEEecchhhCC-------hhHHHHHHHHHHHHcCcCcEEEEEE
Confidence 21238999999999888652 1235678999999999999999975
|
| >d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical methyltransferase TM1389 species: Thermotoga maritima [TaxId: 2336]
Probab=98.08 E-value=8.9e-07 Score=80.83 Aligned_cols=93 Identities=20% Similarity=0.363 Sum_probs=65.0
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCCCCchhHhhhccccc-cccccCCCCCCCC-CccchhhhcC-ccccccCCC
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIG-VYHDWCEPFSTYP-RTYDLIHVSG-IESLIKNPG 452 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~ntl~vi~eRGLiG-~~hdwce~fstYP-rtyDLiHa~~-~fs~~~~~~ 452 (527)
.|||+|||.|.++-.|.+..-=|..|=+. +..+..+-++|..- +..|- +.++ || .+||+|-|.+ ++....
T Consensus 45 ~vLDiGcG~G~~~~~l~~~~~~v~giD~s--~~~l~~a~~~~~~~~~~~~~-~~l~-~~~~~fD~ii~~~~~~~~~~--- 117 (246)
T d2avna1 45 RVLDLGGGTGKWSLFLQERGFEVVLVDPS--KEMLEVAREKGVKNVVEAKA-EDLP-FPSGAFEAVLALGDVLSYVE--- 117 (246)
T ss_dssp EEEEETCTTCHHHHHHHTTTCEEEEEESC--HHHHHHHHHHTCSCEEECCT-TSCC-SCTTCEEEEEECSSHHHHCS---
T ss_pred EEEEECCCCchhcccccccceEEEEeecc--cccccccccccccccccccc-cccc-cccccccceeeecchhhhhh---
Confidence 58999999999999998876433333222 37788888888632 22222 3344 54 8999998754 444332
Q ss_pred CCCCCCcccccceeecccccCCcEEEEeC
Q 009719 453 SNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 453 ~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+...+|-|+-|+|+|||.+++..
T Consensus 118 ------d~~~~l~~i~r~Lk~gG~~ii~~ 140 (246)
T d2avna1 118 ------NKDKAFSEIRRVLVPDGLLIATV 140 (246)
T ss_dssp ------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------hHHHHHHHHHhhcCcCcEEEEEE
Confidence 13567889999999999999974
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.07 E-value=4e-07 Score=84.30 Aligned_cols=98 Identities=16% Similarity=0.311 Sum_probs=66.7
Q ss_pred cCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhh----hccc--cccccccCCCCCCCC-Cccchhh
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIY----DRGL--IGVYHDWCEPFSTYP-RTYDLIH 440 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~----eRGL--iG~~hdwce~fstYP-rtyDLiH 440 (527)
++.+. -|||+|||.|.++..|.+..- +|.-+|-. +.|.++- ++|+ +-.++.=.|.++ +| .+||+|.
T Consensus 14 ~~~~~--rILDiGcGtG~~~~~la~~~~---~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~ 87 (234)
T d1xxla_ 14 CRAEH--RVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-FPDDSFDIIT 87 (234)
T ss_dssp CCTTC--EEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-SCTTCEEEEE
T ss_pred CCCCC--EEEEeCCcCcHHHHHHHHhCC---eEEEEeCChhhhhhhhhhhccccccccccccccccccc-ccccccceee
Confidence 44542 489999999999999987632 44444433 5555443 3443 222332223343 45 8999999
Q ss_pred hcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 441 VSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
|..+|.... +...+|=|+.|+|+|||++++.+
T Consensus 88 ~~~~l~~~~---------d~~~~l~~~~r~LkpgG~~~~~~ 119 (234)
T d1xxla_ 88 CRYAAHHFS---------DVRKAVREVARVLKQDGRFLLVD 119 (234)
T ss_dssp EESCGGGCS---------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeceeeccc---------CHHHHHHHHHHeeCCCcEEEEEE
Confidence 998887543 35789999999999999999864
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.07 E-value=6.8e-06 Score=74.44 Aligned_cols=89 Identities=12% Similarity=0.046 Sum_probs=62.4
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC---cEEeeccccCCCCCCCcccEEEecCcccccccChHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP---AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNAT 215 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p---a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~ 215 (527)
.|.++-.|...+.. +...|.++.+++.|+++ ++. ..+..+|... ++++++||+|+|...+++..+....
T Consensus 63 ~G~~~~~la~~~~~---v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~-~~~~~~fD~Ii~~~p~~~~~~~~~~ 138 (194)
T d1dusa_ 63 YGVIGIALADEVKS---TTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNPPIRAGKEVLHR 138 (194)
T ss_dssp TSHHHHHHGGGSSE---EEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEECCCSTTCHHHHHH
T ss_pred CChhHHHHHhhccc---cceeeeccccchhHHHHHHHhCCccceEEEEEcchhh-hhccCCceEEEEcccEEecchhhhh
Confidence 34444455555432 23347788888888754 333 4566677655 7889999999999887555443345
Q ss_pred HHHHHhhcccCCcEEEEecC
Q 009719 216 YLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p 235 (527)
++.++.|+|||||.+++...
T Consensus 139 ~l~~~~~~LkpgG~l~i~~~ 158 (194)
T d1dusa_ 139 IIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHhcCcCcEEEEEEe
Confidence 89999999999999988654
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=98.05 E-value=5.4e-07 Score=86.00 Aligned_cols=94 Identities=20% Similarity=0.245 Sum_probs=63.6
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCCCCchhHhhh----cccc---ccc-cccCCCCCCCC-CccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKSSTLSVIYD----RGLI---GVY-HDWCEPFSTYP-RTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~ntl~vi~e----RGLi---G~~-hdwce~fstYP-rtyDLiHa~~~ 444 (527)
..|||+|||.|+++..|.++ +.-|+-|=+ ++..+..+-+ .||- -+. .|++ .++ +| .+||+|.+..+
T Consensus 69 ~~vLDiGcG~G~~~~~la~~~~~~v~gvD~--s~~~i~~a~~~~~~~gl~~~v~~~~~d~~-~l~-~~~~sfD~V~~~~~ 144 (282)
T d2o57a1 69 AKGLDLGAGYGGAARFLVRKFGVSIDCLNI--APVQNKRNEEYNNQAGLADNITVKYGSFL-EIP-CEDNSYDFIWSQDA 144 (282)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCCEEEEEES--CHHHHHHHHHHHHHHTCTTTEEEEECCTT-SCS-SCTTCEEEEEEESC
T ss_pred CEEEEeCCCCcHHHhhhhccCCcEEEEEec--cchhhhhhhcccccccccccccccccccc-ccc-ccccccchhhccch
Confidence 58999999999999998664 443332222 1244444433 3542 222 2333 233 34 89999999988
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
|-++. +...+|-|+-|+|||||.+++.+
T Consensus 145 l~h~~---------d~~~~l~~~~~~LkpgG~l~~~~ 172 (282)
T d2o57a1 145 FLHSP---------DKLKVFQECARVLKPRGVMAITD 172 (282)
T ss_dssp GGGCS---------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhcc---------CHHHHHHHHHHhcCCCcEEEEEE
Confidence 87664 24678999999999999999974
|
| >d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Adrenal gland protein AD-003 (C9orf32) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.05 E-value=6e-07 Score=82.75 Aligned_cols=121 Identities=19% Similarity=0.252 Sum_probs=76.2
Q ss_pred CeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cccc--ccc-ccCCCCCCCCCccchhhhcCc
Q 009719 373 AIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLIG--VYH-DWCEPFSTYPRTYDLIHVSGI 444 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLiG--~~h-dwce~fstYPrtyDLiHa~~~ 444 (527)
.-..|||+|||.|.++..|..+...- |.=+|-. +.|..+-++ |.-. .++ |. +.++.-+.+||+|.+..+
T Consensus 60 ~~~~vLDiGcG~G~~~~~l~~~~~~~--v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~-~~~~~~~~~fD~I~~~~~ 136 (222)
T d2ex4a1 60 GTSCALDCGAGIGRITKRLLLPLFRE--VDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGL-QDFTPEPDSYDVIWIQWV 136 (222)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSE--EEEEESCHHHHHHHHHHTGGGGGGEEEEEECCG-GGCCCCSSCEEEEEEESC
T ss_pred CCCEEEEeccCCCHhhHHHHHhcCCE--EEEeecCHHHhhccccccccccccccccccccc-cccccccccccccccccc
Confidence 34679999999999998876543321 1112322 445444333 3211 111 11 223333589999999998
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEeCC----------HH-----HHHHHHHHHhcCCceeEEe
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS----------PE-----VIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~----------~~-----~~~~i~~i~~~l~W~~~~~ 503 (527)
+.+.. + =.+..+|-|+=|+|+|||.+++.+. .+ ..++++++++.--+++.-.
T Consensus 137 l~h~~------~-~~~~~~l~~i~~~Lk~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~aGf~ii~~ 203 (222)
T d2ex4a1 137 IGHLT------D-QHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAE 203 (222)
T ss_dssp GGGSC------H-HHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred cccch------h-hhhhhHHHHHHHhcCCcceEEEEEcccccccccccCCceeeCCHHHHHHHHHHcCCEEEEE
Confidence 87663 1 1234689999999999999999741 11 3677888888777776544
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=98.00 E-value=9e-07 Score=82.56 Aligned_cols=98 Identities=12% Similarity=0.128 Sum_probs=68.8
Q ss_pred cCCCCeeeEeecCCCccchhhhccC-CCeeEEEecCCCCCCchhHhhhc----ccc----ccccccCCCCCCCCCccchh
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTS-DPVWVMNVVPARKSSTLSVIYDR----GLI----GVYHDWCEPFSTYPRTYDLI 439 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~-~~VwvMnvvp~~~~ntl~vi~eR----GLi----G~~hdwce~fstYPrtyDLi 439 (527)
+..+ -.|||+|||.|+++..|.. .+..|.-|=+. +..+..+-++ |+- -...|+-+- +.+..||+|
T Consensus 31 l~pg--~~VLDiGCG~G~~~~~la~~~~~~v~GvD~s--~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~--~~~~~fD~v 104 (245)
T d1nkva_ 31 MKPG--TRILDLGSGSGEMLCTWARDHGITGTGIDMS--SLFTAQAKRRAEELGVSERVHFIHNDAAGY--VANEKCDVA 104 (245)
T ss_dssp CCTT--CEEEEETCTTCHHHHHHHHHTCCEEEEEESC--HHHHHHHHHHHHHTTCTTTEEEEESCCTTC--CCSSCEEEE
T ss_pred CCCC--CEEEEEcCCCCHHHHHHHHhcCCEEEEEecc--cchhhHHHHHHHHhhccccchhhhhHHhhc--cccCceeEE
Confidence 5555 4699999999999998865 46777655432 2444444443 652 133344432 235899999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+|..++..+. +...+|-||-|+|||||.+++.+
T Consensus 105 ~~~~~~~~~~---------d~~~~l~~~~r~LkPGG~l~i~~ 137 (245)
T d1nkva_ 105 ACVGATWIAG---------GFAGAEELLAQSLKPGGIMLIGE 137 (245)
T ss_dssp EEESCGGGTS---------SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred EEEehhhccC---------CHHHHHHHHHHHcCcCcEEEEEe
Confidence 9998887653 24779999999999999999974
|
| >d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein ECA1738 species: Erwinia carotovora [TaxId: 554]
Probab=97.92 E-value=1.6e-06 Score=80.06 Aligned_cols=92 Identities=23% Similarity=0.361 Sum_probs=59.8
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCCCCchhHhhhc---cccccccccCCCCCCCCCccchhhhcCccccccCCC
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDR---GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPG 452 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~ntl~vi~eR---GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~ 452 (527)
+|||+|||.|.|+..|.+..-=|.-|=|. ++.+..+-+| ++-=+..+. +.++ .+.+||+|-|.++|.+..
T Consensus 23 ~VLDiGcG~G~~~~~l~~~g~~v~giD~s--~~~i~~a~~~~~~~~~~~~~~~-~~~~-~~~~fD~I~~~~vleh~~--- 95 (225)
T d2p7ia1 23 NLLELGSFKGDFTSRLQEHFNDITCVEAS--EEAISHAQGRLKDGITYIHSRF-EDAQ-LPRRYDNIVLTHVLEHID--- 95 (225)
T ss_dssp CEEEESCTTSHHHHHHTTTCSCEEEEESC--HHHHHHHHHHSCSCEEEEESCG-GGCC-CSSCEEEEEEESCGGGCS---
T ss_pred cEEEEeCCCcHHHHHHHHcCCeEEEEeCc--HHHhhhhhcccccccccccccc-cccc-cccccccccccceeEecC---
Confidence 59999999999999997763222222221 2344444333 221111222 2222 369999999999998654
Q ss_pred CCCCCCcccccceee-cccccCCcEEEEe
Q 009719 453 SNKNSCSLVDLMVEM-DRMLRPEGTVVVR 480 (527)
Q Consensus 453 ~~~~rC~~~~illEm-DRILRP~G~~iir 480 (527)
+...+|.|+ +|+|+|||.++|.
T Consensus 96 ------d~~~~l~~i~~~~Lk~gG~l~i~ 118 (225)
T d2p7ia1 96 ------DPVALLKRINDDWLAEGGRLFLV 118 (225)
T ss_dssp ------SHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ------CHHHHHHHHHHHhcCCCceEEEE
Confidence 236778888 6999999999996
|
| >d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Carminomycin 4-O-methyltransferase species: Streptomyces peucetius [TaxId: 1950]
Probab=97.92 E-value=3.5e-06 Score=79.46 Aligned_cols=87 Identities=18% Similarity=0.276 Sum_probs=56.0
Q ss_pred hhccccccccC--CeeEEeeccCcChHHHHHHHHH----cCCC--cEEeeccccCCCCCCCcccEEEecCcccccccChH
Q 009719 143 VASFGGSMLSE--NILTLSFAPRDSHKAQIQFALE----RGIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA 214 (527)
Q Consensus 143 vgsfga~Ll~r--~V~~msiAp~D~seaqvq~A~e----Rg~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~ 214 (527)
.|.++..|..+ ++.+..+ |. +.+++.|++ .++. +.+..+|... +.+ .+||+|+++.++|||++...
T Consensus 91 ~G~~~~~la~~~p~~~~~~~---D~-~~~~~~a~~~~~~~~~~~rv~~~~~D~~~-~~~-~~~D~v~~~~vlh~~~d~~~ 164 (253)
T d1tw3a2 91 KGGFAAAIARRAPHVSATVL---EM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLP-RKADAIILSFVLLNWPDHDA 164 (253)
T ss_dssp TSHHHHHHHHHCTTCEEEEE---EC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCS-SCEEEEEEESCGGGSCHHHH
T ss_pred CCHHHHHHHHhcceeEEEEc---cC-HHHHHHHHHHHHHhhcccchhhccccchh-hcc-cchhheeeccccccCCchhh
Confidence 34444455544 4444333 32 224444443 3543 4566666533 333 57999999999999987653
Q ss_pred -HHHHHHhhcccCCcEEEEecC
Q 009719 215 -TYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 215 -~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+|+++.|+|||||+|++...
T Consensus 165 ~~~L~~~~~~LkPGG~l~i~e~ 186 (253)
T d1tw3a2 165 VRILTRCAEALEPGGRILIHER 186 (253)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCCCcEEEEEec
Confidence 489999999999999999764
|
| >d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Methoxy mycolic acid synthase 4, Mma4 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.92 E-value=1.1e-06 Score=85.34 Aligned_cols=99 Identities=10% Similarity=0.079 Sum_probs=69.2
Q ss_pred eeeEeecCCCccchhhhccCC-CeeEEEecCCCCCCchh----HhhhccccccccccCCCCCCCCCccchhhhcCccccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKSSTLS----VIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIESLI 448 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~ntl~----vi~eRGLiG~~hdwce~fstYPrtyDLiHa~~~fs~~ 448 (527)
=-.|||+|||.||||..+.+. +.-|.-|-. +++++. .+.+.||....+.-..-+...|.+||.|-+..+|.+.
T Consensus 53 g~~VLDiGCG~G~~a~~~a~~~g~~v~gi~l--s~~q~~~a~~~~~~~~l~~~~~~~~~d~~~~~~~fD~i~si~~~eh~ 130 (280)
T d2fk8a1 53 GMTLLDIGCGWGTTMRRAVERFDVNVIGLTL--SKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAFEHF 130 (280)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCEEEEEES--CHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEESCGGGT
T ss_pred CCEEEEecCCchHHHHHHHHhCceeEEEecc--hHHHHHHHHHHHHhhccccchhhhhhhhhhhccchhhhhHhhHHHHh
Confidence 346999999999999887544 554433322 224444 4555688655544444455568899999999888876
Q ss_pred cCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 449 KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 449 ~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
. .=....++=++.|+|+|||.++|.+
T Consensus 131 ~-------~~~~~~~f~~i~~~LkpgG~~~i~~ 156 (280)
T d2fk8a1 131 G-------HENYDDFFKRCFNIMPADGRMTVQS 156 (280)
T ss_dssp C-------GGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred h-------hhhHHHHHHHHHhccCCCceEEEEE
Confidence 3 1135678999999999999999863
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.91 E-value=1.2e-06 Score=80.95 Aligned_cols=114 Identities=15% Similarity=0.224 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----cccccccc--ccC
Q 009719 354 WRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGLIGVYH--DWC 426 (527)
Q Consensus 354 W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGLiG~~h--dwc 426 (527)
+...+..+.+++. .........|||+|||.|.++..|.+... +|+=+|-. +-|..+-+ +|+-..++ |.
T Consensus 23 ~~~~~~~~~~~~~-~~~~~~~~~iLDiGcGtG~~~~~l~~~~~---~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~- 97 (251)
T d1wzna1 23 VKAEIDFVEEIFK-EDAKREVRRVLDLACGTGIPTLELAERGY---EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDV- 97 (251)
T ss_dssp HHHHHHHHHHHHH-HTCSSCCCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCG-
T ss_pred HHHHHHHHHHHHH-HhcCCCCCEEEEeCCCCCccchhhcccce---EEEEEeeccccccccccccccccccchheehhh-
Confidence 3333444444443 23444567899999999999999987765 33333433 44544443 35422222 22
Q ss_pred CCCCCCCCccchhhhc-CccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 427 EPFSTYPRTYDLIHVS-GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 427 e~fstYPrtyDLiHa~-~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
+.+ .++.+||+|.|. +.|... +.-+....|-++-|+|+|||++|+.
T Consensus 98 ~~l-~~~~~fD~I~~~~~~~~~~-------~~~~~~~~L~~~~~~LkpgG~lii~ 144 (251)
T d1wzna1 98 LEI-AFKNEFDAVTMFFSTIMYF-------DEEDLRKLFSKVAEALKPGGVFITD 144 (251)
T ss_dssp GGC-CCCSCEEEEEECSSGGGGS-------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhc-ccccccchHhhhhhhhhcC-------ChHHHHHHHHHHHHHcCCCcEEEEE
Confidence 223 257899999985 345543 2234567899999999999999984
|
| >d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Phenylethanolamine N-methyltransferase, PNMTase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.91 E-value=2.6e-06 Score=81.01 Aligned_cols=73 Identities=19% Similarity=0.258 Sum_probs=50.7
Q ss_pred CCCCCCCcccEEEecCcccccccC---hHHHHHHHhhcccCCcEEEEecCCC-CC--------CCchhHHHHHHHHHHhc
Q 009719 189 RLPFPAFSFDIVHCSRCLIPFTAY---NATYLIEVDRLLRPGGYLVISGPPV-QW--------PKQDKEWADLQAVARAL 256 (527)
Q Consensus 189 ~LPFpD~SFDlV~cs~~l~hw~d~---~~~aL~Ei~RVLRPGG~lviS~pp~-~~--------~~~~~~w~~i~~l~~~m 256 (527)
..++++++||+|+|..|++|.+.+ ...+|+++.|+|||||+|++.++.. .+ ...+...+.++++.+.-
T Consensus 150 ~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~~~~~LkPGG~li~~~~~~~~~~~~~~~~~~~~~~t~e~v~~~l~~a 229 (263)
T d2g72a1 150 AGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRS 229 (263)
T ss_dssp SSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHT
T ss_pred cCCcCcCccCeeeeHHHHHHHccCHHHHHHHHHHHHHHcCCCCEEEEecccCCcccccCCcccccCCCCHHHHHHHHHHC
Confidence 356778899999999999888643 2359999999999999999987621 11 11112355666666655
Q ss_pred ceEEe
Q 009719 257 CYELI 261 (527)
Q Consensus 257 cW~~~ 261 (527)
-.+.+
T Consensus 230 Gf~v~ 234 (263)
T d2g72a1 230 GYKVR 234 (263)
T ss_dssp TEEEE
T ss_pred CCeEE
Confidence 55443
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=97.91 E-value=2.7e-06 Score=81.85 Aligned_cols=106 Identities=12% Similarity=0.066 Sum_probs=67.8
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHH----cCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALE----RGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIE 219 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~e----Rg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~E 219 (527)
|.++.++...|..+..+ |.++.+++.|++ .++...+.+++... ++++++||+|+|.....+ ...++.+
T Consensus 132 G~l~i~aa~~g~~V~gv---Dis~~av~~A~~na~~n~~~~~~~~~d~~~-~~~~~~fD~V~ani~~~~----l~~l~~~ 203 (254)
T d2nxca1 132 GVLAIAAEKLGGKALGV---DIDPMVLPQAEANAKRNGVRPRFLEGSLEA-ALPFGPFDLLVANLYAEL----HAALAPR 203 (254)
T ss_dssp SHHHHHHHHTTCEEEEE---ESCGGGHHHHHHHHHHTTCCCEEEESCHHH-HGGGCCEEEEEEECCHHH----HHHHHHH
T ss_pred hHHHHHHHhcCCEEEEE---ECChHHHHHHHHHHHHcCCceeEEeccccc-cccccccchhhhcccccc----HHHHHHH
Confidence 33333444555443333 666777777764 47777777777654 467889999998754322 2338899
Q ss_pred HhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeee
Q 009719 220 VDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAV 263 (527)
Q Consensus 220 i~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~ 263 (527)
+.|+|||||+|++|+--. ..-..+.+..+..-|+.+..
T Consensus 204 ~~~~LkpGG~lilSgil~------~~~~~v~~~~~~~Gf~~~~~ 241 (254)
T d2nxca1 204 YREALVPGGRALLTGILK------DRAPLVREAMAGAGFRPLEE 241 (254)
T ss_dssp HHHHEEEEEEEEEEEEEG------GGHHHHHHHHHHTTCEEEEE
T ss_pred HHHhcCCCcEEEEEecch------hhHHHHHHHHHHCCCEEEEE
Confidence 999999999999997411 11234555556656665443
|
| >d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Indolethylamine N-methyltransferase, INMT species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.90 E-value=9.7e-06 Score=74.86 Aligned_cols=63 Identities=10% Similarity=0.023 Sum_probs=43.7
Q ss_pred CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH----------------HHHHHHHHHHhcCC
Q 009719 434 RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP----------------EVIDKVSRIANTVR 497 (527)
Q Consensus 434 rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~----------------~~~~~i~~i~~~l~ 497 (527)
.+||+|-+..++.... ..+=++..++=+|-|+|||||++|+.+-. -..+.++++++.--
T Consensus 151 ~~fD~i~~~~~l~~~~-----~~~~~~~~~l~~i~~~LkpGG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 225 (257)
T d2a14a1 151 PLADCVLTLLAMECAC-----CSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAG 225 (257)
T ss_dssp CCEEEEEEESCHHHHC-----SSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTT
T ss_pred CcccEEeehhhHHHhc-----ccHHHHHHHHHHHHhccCCCcEEEEEEecccccceeccccccccCCCHHHHHHHHHHCC
Confidence 7999999887776542 01113346788999999999999997511 12566777777766
Q ss_pred ceeE
Q 009719 498 WTAA 501 (527)
Q Consensus 498 W~~~ 501 (527)
+++.
T Consensus 226 f~v~ 229 (257)
T d2a14a1 226 FDIE 229 (257)
T ss_dssp EEEE
T ss_pred CEEE
Confidence 6543
|
| >d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA2 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.87 E-value=2.2e-06 Score=83.97 Aligned_cols=116 Identities=9% Similarity=0.093 Sum_probs=72.6
Q ss_pred HHHHHhhhccCCCCeeeEeecCCCccchhhhcc-CCCeeEEEecCCCCCCchh----HhhhccccccccccCCCCCCCCC
Q 009719 360 YYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALT-SDPVWVMNVVPARKSSTLS----VIYDRGLIGVYHDWCEPFSTYPR 434 (527)
Q Consensus 360 ~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~-~~~VwvMnvvp~~~~ntl~----vi~eRGLiG~~hdwce~fstYPr 434 (527)
...+.++ |+.| -.|||+|||.||++..+. ..++-|.-|-. +++|+. .+-+.||....+.-+.-+.+.+.
T Consensus 52 ~~~~~l~--l~~G--~~VLDiGCG~G~~~~~~a~~~g~~v~git~--s~~q~~~a~~~~~~~~l~~~v~~~~~d~~~~~~ 125 (291)
T d1kpia_ 52 LALDKLN--LEPG--MTLLDIGCGWGSTMRHAVAEYDVNVIGLTL--SENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDE 125 (291)
T ss_dssp HHHHTTC--CCTT--CEEEEETCTTSHHHHHHHHHHCCEEEEEES--CHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCC
T ss_pred HHHHhcC--CCCC--CEEEEecCcchHHHHHHHHhcCcceeeccc--hHHHHHHHHHHHHhhccchhhhhhhhccccccc
Confidence 3344343 5555 369999999999998774 45664443322 223333 34556876554444444444567
Q ss_pred ccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 435 TYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 435 tyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+||-|=+-..|-+..++......=+...++=++.|+|+|||.+++.+
T Consensus 126 ~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~ 172 (291)
T d1kpia_ 126 PVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 172 (291)
T ss_dssp CCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred ccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence 89988777777765421111112234578999999999999999863
|
| >d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA methyltransferase RlmA domain: rRNA methyltransferase RlmA species: Escherichia coli [TaxId: 562]
Probab=97.86 E-value=2.9e-06 Score=81.07 Aligned_cols=91 Identities=12% Similarity=0.124 Sum_probs=58.3
Q ss_pred CCeeeEeecCCCccchhhhccCC--CeeEEEecCCCC-CCchhHhhhccc-cccccccCCCCCCCCCccchhhhcCcccc
Q 009719 372 PAIRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARK-SSTLSVIYDRGL-IGVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 372 ~~iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~-~ntl~vi~eRGL-iG~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
..-.+|||+|||.|.|+.+|.+. ++-+.-| |- +..+..+-+|+- +.....=.+.++.-..+||+|.+...+.
T Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~~gi---D~s~~~~~~a~~~~~~~~~~~~d~~~l~~~~~sfD~v~~~~~~~- 158 (268)
T d1p91a_ 83 DKATAVLDIGCGEGYYTHAFADALPEITTFGL---DVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPC- 158 (268)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEE---ESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCCC-
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCEEEEe---cchHhhhhhhhcccccccceeeehhhccCCCCCEEEEeecCCHH-
Confidence 34568999999999999998654 4444443 32 255666666542 1111111233443348999998753322
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
-+-||.|+|||||++++..
T Consensus 159 ---------------~~~e~~rvLkpgG~l~~~~ 177 (268)
T d1p91a_ 159 ---------------KAEELARVVKPGGWVITAT 177 (268)
T ss_dssp ---------------CHHHHHHHEEEEEEEEEEE
T ss_pred ---------------HHHHHHHHhCCCcEEEEEe
Confidence 2458999999999999974
|
| >d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Bacillus subtilis [TaxId: 1423]
Probab=97.86 E-value=7.8e-06 Score=75.96 Aligned_cols=70 Identities=14% Similarity=0.185 Sum_probs=54.8
Q ss_pred cChHHHHHHHHH----cCCC-cEEeeccccCCC--CCCCcccEEEecCcccccccCh--------HHHHHHHhhcccCCc
Q 009719 164 DSHKAQIQFALE----RGIP-AFVAMLGTRRLP--FPAFSFDIVHCSRCLIPFTAYN--------ATYLIEVDRLLRPGG 228 (527)
Q Consensus 164 D~seaqvq~A~e----Rg~p-a~~~v~dae~LP--FpD~SFDlV~cs~~l~hw~d~~--------~~aL~Ei~RVLRPGG 228 (527)
|.+..+++.|.+ .++. +.+..+|+..|. |++++||.|++.... +|+... ..+|.++.|+|||||
T Consensus 60 D~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~~l~~~~~~~~~d~v~i~fp~-P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG 138 (204)
T d2fcaa1 60 ELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFSD-PWPKKRHEKRRLTYSHFLKKYEEVMGKGG 138 (204)
T ss_dssp CSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESCC-CCCSGGGGGGSTTSHHHHHHHHHHHTTSC
T ss_pred ecchHHHHHHHHHHHHHhccCchhcccchhhhhcccCchhhhcccccccc-ccchhhhcchhhhHHHHHHHHHHhCCCCc
Confidence 667777776653 4665 567788998887 899999999987664 666543 249999999999999
Q ss_pred EEEEec
Q 009719 229 YLVISG 234 (527)
Q Consensus 229 ~lviS~ 234 (527)
.|.+.+
T Consensus 139 ~l~i~T 144 (204)
T d2fcaa1 139 SIHFKT 144 (204)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999976
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.86 E-value=9.4e-06 Score=79.12 Aligned_cols=85 Identities=12% Similarity=0.099 Sum_probs=60.0
Q ss_pred hcccccccc-CCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccCh-HH
Q 009719 144 ASFGGSMLS-ENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-AT 215 (527)
Q Consensus 144 gsfga~Ll~-r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~ 215 (527)
|+++-++.. .|+.+..| .+|+.|++.|+++ |.. +.+..+|...+| ++||.|++-.++.|+.... ..
T Consensus 74 G~~a~~~a~~~g~~v~gi---t~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~~~~~---~~fD~i~si~~~eh~~~~~~~~ 147 (285)
T d1kpga_ 74 GATMMRAVEKYDVNVVGL---TLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAFEHFGHERYDA 147 (285)
T ss_dssp SHHHHHHHHHHCCEEEEE---ESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCGGGTCTTTHHH
T ss_pred hHHHHHHHhcCCcceEEE---eccHHHHHHHHHHHHhhhhhhhhHHHHhhhhccc---ccccceeeehhhhhcCchhHHH
Confidence 444444432 35544444 4577899888765 332 345567776665 6799999999999997543 35
Q ss_pred HHHHHhhcccCCcEEEEec
Q 009719 216 YLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~ 234 (527)
+|+++.|+|||||++++.+
T Consensus 148 ~~~~~~r~LkpgG~~~l~~ 166 (285)
T d1kpga_ 148 FFSLAHRLLPADGVMLLHT 166 (285)
T ss_dssp HHHHHHHHSCTTCEEEEEE
T ss_pred HHHHHHhhcCCCCcEEEEE
Confidence 9999999999999999843
|
| >d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Probable methyltransferase Rv2118c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.83 E-value=5.9e-06 Score=80.07 Aligned_cols=67 Identities=19% Similarity=0.104 Sum_probs=54.6
Q ss_pred cChHHHHHHHHHc------C--CCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER------G--IPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR------g--~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++.+++.|+++ + ....+.++|....+|++++||+|++ |.+++.. ++.++.|+|||||+|++..|
T Consensus 128 d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d~~~~~~~~~~fDaV~l-----dlp~P~~-~l~~~~~~LkpGG~lv~~~P 201 (264)
T d1i9ga_ 128 EQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVL-----DMLAPWE-VLDAVSRLLVAGGVLMVYVA 201 (264)
T ss_dssp CSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEE-----ESSCGGG-GHHHHHHHEEEEEEEEEEES
T ss_pred cCCHHHHHHHHHhhhhhccCCCceEEEEecccccccccCCCcceEEE-----ecCCHHH-HHHHHHhccCCCCEEEEEeC
Confidence 7788899988763 1 1345778898889999999999985 5556555 99999999999999999888
Q ss_pred C
Q 009719 236 P 236 (527)
Q Consensus 236 p 236 (527)
.
T Consensus 202 ~ 202 (264)
T d1i9ga_ 202 T 202 (264)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.80 E-value=5.1e-06 Score=74.93 Aligned_cols=86 Identities=12% Similarity=0.087 Sum_probs=65.3
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
.|.++..|..+.-.+..+ |.++++++.|+++ |+ .+.+.++++..++++..+||+|+|.....|+ ..+
T Consensus 44 sG~~s~~lA~~~~~V~av---D~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~~~~~~~~~D~v~~~~~~~~~----~~~ 116 (186)
T d1l3ia_ 44 TGGVTLELAGRVRRVYAI---DRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGGSGGEL----QEI 116 (186)
T ss_dssp TSHHHHHHHTTSSEEEEE---ESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESCCTTCH----HHH
T ss_pred eEcccccccccceEEEEe---cCCHHHHHHHHHHHHHcCCCcceEEEECchhhcccccCCcCEEEEeCccccc----hHH
Confidence 455555666555444333 7888999988764 55 3567788999999999999999998766553 238
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
+.++.++|||||+++++..
T Consensus 117 ~~~~~~~LkpgG~lvi~~~ 135 (186)
T d1l3ia_ 117 LRIIKDKLKPGGRIIVTAI 135 (186)
T ss_dssp HHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHhCcCCEEEEEee
Confidence 9999999999999999865
|
| >d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Carminomycin 4-O-methyltransferase species: Streptomyces peucetius [TaxId: 1950]
Probab=97.79 E-value=1.6e-06 Score=81.83 Aligned_cols=106 Identities=23% Similarity=0.323 Sum_probs=68.3
Q ss_pred ccCCCCeeeEeecCCCccchhhhccCC--Ce--eEEEecCCCCCCchhHhhhcccccccccc-CCCCCCCCCccchhhhc
Q 009719 368 KLGTPAIRNIMDMNAFFGGFAAALTSD--PV--WVMNVVPARKSSTLSVIYDRGLIGVYHDW-CEPFSTYPRTYDLIHVS 442 (527)
Q Consensus 368 ~i~~~~iRnvmDm~ag~GgFaAaL~~~--~V--wvMnvvp~~~~ntl~vi~eRGLiG~~hdw-ce~fstYPrtyDLiHa~ 442 (527)
.+..+.++.|||+|||.|.++.+|.++ .+ .++.. |......-+.+-+.|+..-..-- ...|...|..||+|.+.
T Consensus 75 ~~d~~~~~~VLDvGcG~G~~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~D~~~~~~~~~D~v~~~ 153 (253)
T d1tw3a2 75 AYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILS 153 (253)
T ss_dssp HSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEEEEEE
T ss_pred hcCCccCCEEEEeCCCCCHHHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchhhccccchhhcccchhheeec
Confidence 456678999999999999999999543 33 33332 21111112334455653222111 11244457889999999
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.++-.|. + =....+|-|+=|.|+|||.++|.|
T Consensus 154 ~vlh~~~------d-~~~~~~L~~~~~~LkPGG~l~i~e 185 (253)
T d1tw3a2 154 FVLLNWP------D-HDAVRILTRCAEALEPGGRILIHE 185 (253)
T ss_dssp SCGGGSC------H-HHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccccCC------c-hhhHHHHHHHHHhcCCCcEEEEEe
Confidence 9988774 1 122467889999999999999874
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=97.75 E-value=5.5e-06 Score=76.12 Aligned_cols=97 Identities=11% Similarity=0.176 Sum_probs=71.8
Q ss_pred eEeecCCCccchhhhccC---CCeeEEEecCCCCC-CchhHhhhc----cccccccccCCCCCCCC-CccchhhhcCccc
Q 009719 376 NIMDMNAFFGGFAAALTS---DPVWVMNVVPARKS-STLSVIYDR----GLIGVYHDWCEPFSTYP-RTYDLIHVSGIES 446 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~---~~VwvMnvvp~~~~-ntl~vi~eR----GLiG~~hdwce~fstYP-rtyDLiHa~~~fs 446 (527)
.|||+|||+|..+.+|.. .|-+ +|.=.|-. .-|..+-++ +....++-.+.-+..+| ..+|++.|..++.
T Consensus 42 ~vLDlGCGtG~~~~~l~~~~~~~~~--~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~i~~~~~l~ 119 (225)
T d1im8a_ 42 NVYDLGCSRGAATLSARRNINQPNV--KIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEIKNASMVILNFTLQ 119 (225)
T ss_dssp EEEEESCTTCHHHHHHHHTCCCSSC--EEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCCCCSEEEEEEESCGG
T ss_pred EEEEeccchhhHHHHHHHhhcCCCC--ceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhccccccceeeEEeeecc
Confidence 699999999998877643 2322 34444544 666666554 67777887777777777 7899999988876
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
... .=+...+|=||=|.|+|||.+|+.|
T Consensus 120 ~~~-------~~d~~~~l~~i~~~LkpgG~li~~~ 147 (225)
T d1im8a_ 120 FLP-------PEDRIALLTKIYEGLNPNGVLVLSE 147 (225)
T ss_dssp GSC-------GGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccC-------hhhHHHHHHHHHHhCCCCceeeccc
Confidence 542 2234679999999999999999985
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.73 E-value=3.5e-06 Score=82.25 Aligned_cols=104 Identities=10% Similarity=0.106 Sum_probs=66.4
Q ss_pred cCCCCeeeEeecCCCccchhhhc-cCC--CeeEEEecCCCCCCchhHhhhccccccccccCCCCCCCCCccchhhhcCcc
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAAL-TSD--PVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL-~~~--~VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
++.| ..|||+|||.||+|-.+ ... .|..+++.+....---..+.+.|+.+-..--+.-+...|-+||-|=+-..|
T Consensus 60 l~~G--~~VLDiGCG~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~fD~i~si~~~ 137 (285)
T d1kpga_ 60 LQPG--MTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSIGAF 137 (285)
T ss_dssp CCTT--CEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEEEESCG
T ss_pred CCCC--CEEEEecCcchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhhhcccccccceeeehhh
Confidence 5555 45999999999998765 233 455556654432222244567777554432233344456789977777777
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
-+.. .=+...++-|+.|+|+|||.+++.+
T Consensus 138 eh~~-------~~~~~~~~~~~~r~LkpgG~~~l~~ 166 (285)
T d1kpga_ 138 EHFG-------HERYDAFFSLAHRLLPADGVMLLHT 166 (285)
T ss_dssp GGTC-------TTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hhcC-------chhHHHHHHHHHhhcCCCCcEEEEE
Confidence 6542 1123568899999999999998853
|
| >d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Aclacinomycin-10-hydroxylase RdmB species: Streptomyces purpurascens [TaxId: 1924]
Probab=97.73 E-value=7.6e-06 Score=77.78 Aligned_cols=66 Identities=29% Similarity=0.335 Sum_probs=46.9
Q ss_pred HHHHHHHH----cCCC--cEEeeccccCCCCCCCcccEEEecCcccccccChH-HHHHHHhhcccCCcEEEEecC
Q 009719 168 AQIQFALE----RGIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA-TYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 168 aqvq~A~e----Rg~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~-~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+++.|++ .+.. ..+..+|.. -|.| ..||+|++..++|||.+... .+|+++.|+|||||+|+|...
T Consensus 115 ~~~~~a~~~~~~~~~~~ri~~~~~d~~-~~~p-~~~D~v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~ 187 (256)
T d1qzza2 115 GPAERARRRFADAGLADRVTVAEGDFF-KPLP-VTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 187 (256)
T ss_dssp HHHHHHHHHHHHTTCTTTEEEEECCTT-SCCS-CCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHhhcCCcceeeeeeeecc-cccc-ccchhhhccccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence 45555543 3443 334444443 2555 45999999999999987653 489999999999999999764
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=97.72 E-value=2.4e-06 Score=77.21 Aligned_cols=94 Identities=17% Similarity=0.198 Sum_probs=64.7
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCCCCchhH----hhhcccc---ccccccCCCCCCCCCccchhhhcCccccc
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSV----IYDRGLI---GVYHDWCEPFSTYPRTYDLIHVSGIESLI 448 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~ntl~v----i~eRGLi---G~~hdwce~fstYPrtyDLiHa~~~fs~~ 448 (527)
.|||+|||.|.++-+|.++..=|..|=+.. ..|.. +-+.|+- ....|.++. .++.+||+|.|..+|-..
T Consensus 33 rvLDiGcG~G~~~~~la~~g~~v~gvD~s~--~~l~~a~~~~~~~~~~~~~~~~~d~~~~--~~~~~fD~I~~~~~~~~~ 108 (198)
T d2i6ga1 33 RTLDLGCGNGRNSLYLAANGYDVTAWDKNP--ASMANLERIKAAEGLDNLQTDLVDLNTL--TFDGEYDFILSTVVMMFL 108 (198)
T ss_dssp EEEEETCTTSHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHTTCTTEEEEECCTTTC--CCCCCEEEEEEESCGGGS
T ss_pred cEEEECCCCCHHHHHHHHHhhhhccccCcH--HHHHHHHHHhhhccccchhhhheecccc--cccccccEEEEeeeeecC
Confidence 599999999999999988865443332221 33333 2344442 233344432 256899999999998765
Q ss_pred cCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 449 KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 449 ~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
. .=....+|=++-|+|+|||++++.
T Consensus 109 ~-------~~~~~~~l~~~~~~L~pgG~~~~~ 133 (198)
T d2i6ga1 109 E-------AQTIPGLIANMQRCTKPGGYNLIV 133 (198)
T ss_dssp C-------TTHHHHHHHHHHHTEEEEEEEEEE
T ss_pred C-------HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 3 223567999999999999999986
|
| >d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810) species: Leishmania major [TaxId: 5664]
Probab=97.71 E-value=2.6e-06 Score=81.04 Aligned_cols=126 Identities=16% Similarity=0.168 Sum_probs=77.4
Q ss_pred cCCCCeeeEeecCCCccchhhhccCC---CeeEEEecCCCCCCchhHhhhc----cccccccccCCCCCCCCCccchhhh
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKSSTLSVIYDR----GLIGVYHDWCEPFSTYPRTYDLIHV 441 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~ntl~vi~eR----GLiG~~hdwce~fstYPrtyDLiHa 441 (527)
+....-.+|||+|||.|.++..|..+ .|..+-.. +..|..+-++ +.+-.++.=-+.|+.=+.+||+|.+
T Consensus 89 l~~~~~~~vLD~GcG~G~~t~~ll~~~~~~v~~vD~s----~~~l~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I~~ 164 (254)
T d1xtpa_ 89 LPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPV----KHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVI 164 (254)
T ss_dssp STTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESC----HHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEE
T ss_pred CCCCCCCeEEEecccCChhhHHHHhhcCceEEEEcCC----HHHHHhhhccccccccceeEEccccccccCCCccceEEe
Confidence 34455678999999999999887543 23332221 1333333222 2222221111223322489999999
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-----------HH-----HHHHHHHHHhcCCceeEEecC
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-----------PE-----VIDKVSRIANTVRWTAAVHDK 505 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-----------~~-----~~~~i~~i~~~l~W~~~~~~~ 505 (527)
..+|-++. + =.+..+|-|+-|+|+|||+++|.+. .+ ..++++++++.--+++..++.
T Consensus 165 ~~vl~hl~------d-~d~~~~l~~~~~~LkpgG~iii~e~~~~~~~~~~d~~d~~~~rs~~~~~~l~~~aGf~ii~~~~ 237 (254)
T d1xtpa_ 165 QWTAIYLT------D-ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAF 237 (254)
T ss_dssp ESCGGGSC------H-HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEE
T ss_pred eccccccc------h-hhhHHHHHHHHHhcCCCcEEEEEecCCCCCcceecccCCceeCCHHHHHHHHHHcCCEEEEEEe
Confidence 99988764 1 1245679999999999999999752 10 245677777776777655443
|
| >d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Histamine methyltransferase domain: Histamine methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.69 E-value=5.9e-06 Score=78.20 Aligned_cols=95 Identities=15% Similarity=0.220 Sum_probs=58.6
Q ss_pred eEeecCCCccchhhhccCC------CeeEEEecCCCCC-CchhHhhhc-----cccccccccCCC-C--------CCC-C
Q 009719 376 NIMDMNAFFGGFAAALTSD------PVWVMNVVPARKS-STLSVIYDR-----GLIGVYHDWCEP-F--------STY-P 433 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~------~VwvMnvvp~~~~-ntl~vi~eR-----GLiG~~hdwce~-f--------stY-P 433 (527)
+|||+|||.|.|+..|.+. ++. ..++=+|.. ..+..+-+| .+-.+--+|... + ... +
T Consensus 43 ~VLDiGcG~G~~~~~ll~~l~~~~~~~~-~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (280)
T d1jqea_ 43 KILSIGGGAGEIDLQILSKVQAQYPGVC-INNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRMLEKKEL 121 (280)
T ss_dssp EEEEETCTTSHHHHHHHHHHHHHSTTCE-EEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHHTTSSSC
T ss_pred eEEEEcCCCCHHHHHHHHHhhhhccCCc-eEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchhcccCCC
Confidence 6999999999997666332 221 222222322 334444333 222222222211 1 112 4
Q ss_pred CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 434 RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 434 rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
.+||+|+|.++|-... ++...|-+|-|+|+|||+++|.
T Consensus 122 ~~fD~I~~~~~l~~~~---------d~~~~l~~l~~~LkpgG~l~i~ 159 (280)
T d1jqea_ 122 QKWDFIHMIQMLYYVK---------DIPATLKFFHSLLGTNAKMLII 159 (280)
T ss_dssp CCEEEEEEESCGGGCS---------CHHHHHHHHHHTEEEEEEEEEE
T ss_pred CceeEEEEccceecCC---------CHHHHHHHHHhhCCCCCEEEEE
Confidence 8999999999988653 2578999999999999998876
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=97.65 E-value=9.7e-06 Score=77.73 Aligned_cols=96 Identities=10% Similarity=0.124 Sum_probs=62.1
Q ss_pred CCeeeEeecCCCccchhhhccC---CCeeEEEecCCCCC-CchhHhhh----ccccc--cccccCCCCCCCCCccchhhh
Q 009719 372 PAIRNIMDMNAFFGGFAAALTS---DPVWVMNVVPARKS-STLSVIYD----RGLIG--VYHDWCEPFSTYPRTYDLIHV 441 (527)
Q Consensus 372 ~~iRnvmDm~ag~GgFaAaL~~---~~VwvMnvvp~~~~-ntl~vi~e----RGLiG--~~hdwce~fstYPrtyDLiHa 441 (527)
.+-++|||+|||.|.++..|.+ ...-|.-| |-. +.+..+-+ .|+-- ...|.. .++ ++.+||+|+|
T Consensus 26 ~~~~~ILDiGcG~G~~~~~la~~~~~~~~v~gi---D~s~~~l~~a~~~~~~~~~~~~f~~~d~~-~~~-~~~~fD~v~~ 100 (281)
T d2gh1a1 26 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGI---DSGETLLAEARELFRLLPYDSEFLEGDAT-EIE-LNDKYDIAIC 100 (281)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEE---ECCHHHHHHHHHHHHSSSSEEEEEESCTT-TCC-CSSCEEEEEE
T ss_pred CCcCEEEEecCcCCHHHHHHHHhCCCCCEEEEE---ecchhHhhhhhcccccccccccccccccc-ccc-ccCCceEEEE
Confidence 4557899999999999877754 23333332 222 33333322 23311 122332 233 4689999999
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
..++.+.. +...+|-||-|+|+|||++++.+
T Consensus 101 ~~~l~~~~---------d~~~~l~~~~~~LkpgG~lii~~ 131 (281)
T d2gh1a1 101 HAFLLHMT---------TPETMLQKMIHSVKKGGKIICFE 131 (281)
T ss_dssp ESCGGGCS---------SHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ehhhhcCC---------CHHHHHHHHHHHcCcCcEEEEEE
Confidence 99987654 23678999999999999999865
|
| >d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.63 E-value=3.9e-05 Score=71.13 Aligned_cols=70 Identities=21% Similarity=0.326 Sum_probs=54.1
Q ss_pred cChHHHHHHHHH----cCCC-cEEeeccccCCC--CCCCcccEEEecCcccccccCh--------HHHHHHHhhcccCCc
Q 009719 164 DSHKAQIQFALE----RGIP-AFVAMLGTRRLP--FPAFSFDIVHCSRCLIPFTAYN--------ATYLIEVDRLLRPGG 228 (527)
Q Consensus 164 D~seaqvq~A~e----Rg~p-a~~~v~dae~LP--FpD~SFDlV~cs~~l~hw~d~~--------~~aL~Ei~RVLRPGG 228 (527)
|.++.++..|.+ .+++ +.+..+|+..|+ |++.++|.|++.+. .+|+... ..+|.++.|+|||||
T Consensus 62 d~~~~~v~~a~~~~~~~~l~Ni~~~~~da~~l~~~~~~~~~~~i~i~fP-dPw~K~~h~krRl~~~~~l~~~~~~LkpgG 140 (204)
T d1yzha1 62 DIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS-DPWPKKRHEKRRLTYKTFLDTFKRILPENG 140 (204)
T ss_dssp ESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC-CCCCSGGGGGGSTTSHHHHHHHHHHSCTTC
T ss_pred eccHHHHHHHHHhhhhhccccceeeecCHHHHhhhccCCceehhccccc-ccccchhhhhhhhhHHHHHHHHHHhCCCCc
Confidence 556677776654 4665 567778888886 89999999998764 5776542 248999999999999
Q ss_pred EEEEec
Q 009719 229 YLVISG 234 (527)
Q Consensus 229 ~lviS~ 234 (527)
.|.+++
T Consensus 141 ~l~i~T 146 (204)
T d1yzha1 141 EIHFKT 146 (204)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999976
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=97.61 E-value=4.2e-06 Score=78.49 Aligned_cols=98 Identities=15% Similarity=0.047 Sum_probs=62.0
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc----cc---c-cccccCCCCCC-CCCccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG----LI---G-VYHDWCEPFST-YPRTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG----Li---G-~~hdwce~fst-YPrtyDLiHa~~~ 444 (527)
.+|||+|||.|+++..+.+.+.- +|+-+|-. ..|..+-+|- .. - ...|- ...+. ...+||+|.|...
T Consensus 26 ~~VLDlGCG~G~~~~~~~~~~~~--~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~-~~~~~~~~~~fD~V~~~~~ 102 (252)
T d1ri5a_ 26 DSVLDLGCGKGGDLLKYERAGIG--EYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDS-YGRHMDLGKEFDVISSQFS 102 (252)
T ss_dssp CEEEEETCTTTTTHHHHHHHTCS--EEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCT-TTSCCCCSSCEEEEEEESC
T ss_pred CEEEEecccCcHHHHHHHHcCCC--eEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcch-hhhcccccccceEEEEcce
Confidence 47999999999999988776543 23333433 6666666552 11 1 11121 11121 2368999998766
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
+-..- .+.=.+..+|-||-|+|+|||++|+.
T Consensus 103 l~~~~-----~~~~~~~~~l~~i~~~Lk~gG~~i~~ 133 (252)
T d1ri5a_ 103 FHYAF-----STSESLDIAQRNIARHLRPGGYFIMT 133 (252)
T ss_dssp GGGGG-----SSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred eeecC-----CCHHHHHHHHHHHhceeCCCCEEEEE
Confidence 65432 01112457899999999999999986
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.60 E-value=1.3e-06 Score=83.84 Aligned_cols=115 Identities=17% Similarity=0.221 Sum_probs=67.9
Q ss_pred HHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----cccccccc-------ccC-
Q 009719 360 YYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGLIGVYH-------DWC- 426 (527)
Q Consensus 360 ~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGLiG~~h-------dwc- 426 (527)
.|.+.+...++....++|||+|||.|.++..|.+... +|+-+|-. +-|..+-+ ++.-..++ +|-
T Consensus 43 ~~~~~l~~~l~~~~~~~vLD~GcG~G~~~~~la~~g~---~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (292)
T d1xvaa_ 43 EYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT 119 (292)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG
T ss_pred HHHHHHHHHhhhcCCCEEEEecCCCcHHHHHHHHcCC---eeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccc
Confidence 3444433333334457899999999999999988763 44555544 55554433 23322111 111
Q ss_pred --CCCCCCCCccchhhhcC-ccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 427 --EPFSTYPRTYDLIHVSG-IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 427 --e~fstYPrtyDLiHa~~-~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
..++ +..+||+|-|.+ .|.+..+ .....=++..+|-||-|+|+|||.+|+.
T Consensus 120 ~~~~~~-~~~~fd~v~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~LkpgG~li~~ 173 (292)
T d1xvaa_ 120 LDKDVP-AGDGFDAVICLGNSFAHLPD--SKGDQSEHRLALKNIASMVRPGGLLVID 173 (292)
T ss_dssp HHHHSC-CTTCEEEEEECSSCGGGSCC--TTSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cccccC-CCCCceEEEEecCchhhcCC--cccChHHHHHHHHHHHHHcCcCcEEEEe
Confidence 1111 347899998754 4554421 0001112446899999999999999995
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.52 E-value=1.5e-05 Score=77.20 Aligned_cols=119 Identities=13% Similarity=0.085 Sum_probs=69.3
Q ss_pred HHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCC-eeEEEecCCCCC-CchhHhhhccc---cccccccCCCCC
Q 009719 356 RRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDP-VWVMNVVPARKS-STLSVIYDRGL---IGVYHDWCEPFS 430 (527)
Q Consensus 356 ~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~-VwvMnvvp~~~~-ntl~vi~eRGL---iG~~hdwce~fs 430 (527)
.|.+.|.+.+......-+=.+|||+|||.|.++..+.... --|..+-....- .....+-+.|+ |-+.+.-.+-+.
T Consensus 18 ~r~~~y~~ai~~~~~~~~~~~VLDiGcG~G~lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~ 97 (311)
T d2fyta1 18 IRTESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVH 97 (311)
T ss_dssp HHHHHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC
T ss_pred HHHHHHHHHHHhccccCCcCEEEEECCCCCHHHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhc
Confidence 4455676655432111122469999999999877665543 234444322211 23345556665 333333333444
Q ss_pred CCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 431 TYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 431 tYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
.-+..||+|=+.-+++... ..-.++.++-.++|.|+|||.+|-.
T Consensus 98 ~~~~~~D~Ivse~~~~~~~------~e~~~~~~~~a~~~~Lkp~G~iip~ 141 (311)
T d2fyta1 98 LPVEKVDVIISEWMGYFLL------FESMLDSVLYAKNKYLAKGGSVYPD 141 (311)
T ss_dssp CSCSCEEEEEECCCBTTBT------TTCHHHHHHHHHHHHEEEEEEEESC
T ss_pred CccccceEEEEeeeeeecc------cccccHHHHHHHHhcCCCCcEEecc
Confidence 3348999998765555432 2223457777899999999999854
|
| >d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Aclacinomycin-10-hydroxylase RdmB species: Streptomyces purpurascens [TaxId: 1924]
Probab=97.49 E-value=3.7e-06 Score=79.99 Aligned_cols=105 Identities=20% Similarity=0.221 Sum_probs=68.4
Q ss_pred cCCCCeeeEeecCCCccchhhhccCC----CeeEEEecCCCCCCchhHhhhccccccccccC-CCCCCCCCccchhhhcC
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSD----PVWVMNVVPARKSSTLSVIYDRGLIGVYHDWC-EPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~----~VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwc-e~fstYPrtyDLiHa~~ 443 (527)
+..+.++.|||+|||.|.++++|.++ .+.++.. |......-..+-+.|+-....-.. ..|...|..||++.+..
T Consensus 77 ~d~~~~~~vlDvG~G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~d~~~~~p~~~D~v~~~~ 155 (256)
T d1qzza2 77 YDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSF 155 (256)
T ss_dssp SCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEEEEEEES
T ss_pred CCCccCCEEEEECCCCCHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeeeeccccccccchhhhccc
Confidence 45678999999999999999999654 2344432 321112223344556533111111 23444577899999999
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+|-.|. + =....+|=++=|.|+|||.++|-|
T Consensus 156 vLh~~~------d-~~~~~lL~~i~~~LkpgG~llI~d 186 (256)
T d1qzza2 156 VLLNWS------D-EDALTILRGCVRALEPGGRLLVLD 186 (256)
T ss_dssp CGGGSC------H-HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccC------c-HHHHHHHHHHHhhcCCcceeEEEE
Confidence 998774 1 122467888999999999999875
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.47 E-value=1.8e-05 Score=71.53 Aligned_cols=135 Identities=17% Similarity=0.174 Sum_probs=75.6
Q ss_pred cCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccccc-----cccccCCCCCCCCCccch
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGLIG-----VYHDWCEPFSTYPRTYDL 438 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGLiG-----~~hdwce~fstYPrtyDL 438 (527)
+....-.+|+|+|||.|.|+.+|.+..- +|.-+|-. ..+..+-+ .|+-. +..|+-+.+ .+.+||+
T Consensus 48 l~~~~~~~VLDiGcG~G~~~~~la~~~~---~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~--~~~~fD~ 122 (194)
T d1dusa_ 48 VVVDKDDDILDLGCGYGVIGIALADEVK---STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV--KDRKYNK 122 (194)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC--TTSCEEE
T ss_pred CCcCCCCeEEEEeecCChhHHHHHhhcc---ccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhh--ccCCceE
Confidence 3444557899999999999988865421 23333332 44444432 23321 123444433 2589999
Q ss_pred hhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-HHHHHHHHHHHhcCCceeEEecCCCCCCCCceEEE
Q 009719 439 IHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-PEVIDKVSRIANTVRWTAAVHDKEPGSNGREKILV 517 (527)
Q Consensus 439 iHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-~~~~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiLi 517 (527)
|-++..|.... + .+..++=++.|+|+|||.+++.-. ...-+.+.+.++..-+++...... ..=+||-
T Consensus 123 Ii~~~p~~~~~------~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~f~~~~~~~~~----~gf~vl~ 190 (194)
T d1dusa_ 123 IITNPPIRAGK------E--VLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVETVTIK----GGYRVLK 190 (194)
T ss_dssp EEECCCSTTCH------H--HHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCEEEEEE----TTEEEEE
T ss_pred EEEcccEEecc------h--hhhhHHHHHHHhcCcCcEEEEEEeCcCCHHHHHHHHHHhCCcEEEEEec----CCcEEEE
Confidence 99886654221 1 134578889999999998766421 222233444444444444433111 2346777
Q ss_pred EEe
Q 009719 518 ATK 520 (527)
Q Consensus 518 ~~K 520 (527)
++|
T Consensus 191 a~K 193 (194)
T d1dusa_ 191 SKK 193 (194)
T ss_dssp EEC
T ss_pred EEE
Confidence 776
|
| >d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.45 E-value=1.8e-05 Score=78.09 Aligned_cols=56 Identities=14% Similarity=-0.035 Sum_probs=44.8
Q ss_pred CcEEeeccccCCCCCCCcccE-EEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 179 PAFVAMLGTRRLPFPAFSFDI-VHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 179 pa~~~v~dae~LPFpD~SFDl-V~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+..+..+|+..+||.+..||+ |++...+.|+++... +|.|+.|+|||||+++.+.+
T Consensus 211 ~i~~~~gd~~~~~~~~~~~~advi~~~~~~f~~~~~~-~l~e~~r~LKpGg~iv~~~~ 267 (328)
T d1nw3a_ 211 EYTLERGDFLSEEWRERIANTSVIFVNNFAFGPEVDH-QLKERFANMKEGGRIVSSKP 267 (328)
T ss_dssp CEEEEECCTTSHHHHHHHHHCSEEEECCTTTCHHHHH-HHHHHHTTCCTTCEEEESSC
T ss_pred ceEEEECcccccccccccCcceEEEEcceecchHHHH-HHHHHHHhCCCCcEEEEecc
Confidence 467888999999999988865 554456667766555 99999999999999998654
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.43 E-value=5e-05 Score=70.39 Aligned_cols=70 Identities=10% Similarity=-0.036 Sum_probs=48.4
Q ss_pred cChHHHHHHHHHcC---CCcEEeeccccCCCCCCCcccEEEec-CcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALERG---IPAFVAMLGTRRLPFPAFSFDIVHCS-RCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eRg---~pa~~~v~dae~LPFpD~SFDlV~cs-~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++.|++.|+++. ....+..+++...+.++..||.|.+. ..+.|+.+. ..+++|+.|+|||||+++++.
T Consensus 87 Dis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~v~~~~~~~~~~-~~~l~~~~~~LkpgG~l~i~~ 160 (209)
T d1nt2a_ 87 EYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDIAQKNQI-EILKANAEFFLKEKGEVVIMV 160 (209)
T ss_dssp CCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECCCSTTHH-HHHHHHHHHHEEEEEEEEEEE
T ss_pred eCCHHHHHHHHHHhhccCCceEEEeeccCccccccccceEEEEEecccChhhH-HHHHHHHHHHhccCCeEEEEE
Confidence 67778888776541 23456667777777776666666433 334455444 349999999999999999865
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=97.42 E-value=6e-05 Score=69.79 Aligned_cols=64 Identities=11% Similarity=0.059 Sum_probs=49.7
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++.+++.|+++ ++. ..+..+|+...++.+++||+|+|..++.|.+ .++.|+|||||+|++..
T Consensus 107 d~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~~~~~~fD~I~~~~~~~~~p-------~~l~~~LkpGG~lv~pv 175 (213)
T d1dl5a1 107 EYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVGVDEVP-------ETWFTQLKEGGRVIVPI 175 (213)
T ss_dssp ESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSBBSCCC-------HHHHHHEEEEEEEEEEB
T ss_pred ecchhhHHHhhhhHhhhcccccccccCchHHccccccchhhhhhhccHHHhH-------HHHHHhcCCCcEEEEEE
Confidence 5677888888764 343 4556678888888899999999999887754 35678999999999854
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.42 E-value=2.4e-05 Score=73.79 Aligned_cols=99 Identities=9% Similarity=0.100 Sum_probs=60.9
Q ss_pred cChHHHHHHHHHcC--CC-cEEeeccc-cCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCC--C
Q 009719 164 DSHKAQIQFALERG--IP-AFVAMLGT-RRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPP--V 237 (527)
Q Consensus 164 D~seaqvq~A~eRg--~p-a~~~v~da-e~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp--~ 237 (527)
|.++.|++.|+++. .+ .....+++ ...+|.+..||++++...++|+. ....++.|+.|+|||||+++++... .
T Consensus 105 DiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~i~~~~~~~~-~~~~~l~~~~r~LKpgG~~~i~~k~~~~ 183 (230)
T d1g8sa_ 105 EYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYEDVAQPN-QAEILIKNAKWFLKKGGYGMIAIKARSI 183 (230)
T ss_dssp ESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEEEEECCCSTT-HHHHHHHHHHHHEEEEEEEEEEEEGGGT
T ss_pred eCcHHHHHHHHHHHhhhcccceEEEeeccCcccccccceeEEeeccccchH-HHHHHHHHHHHhcccCceEEEEeecccc
Confidence 67788888887752 12 23334443 44567889999887766655544 4445999999999999999997532 2
Q ss_pred CCCCchh-HHHHHHHHHHhcceEEeee
Q 009719 238 QWPKQDK-EWADLQAVARALCYELIAV 263 (527)
Q Consensus 238 ~~~~~~~-~w~~i~~l~~~mcW~~~~~ 263 (527)
+.....+ ..+...+..+.-.++.+..
T Consensus 184 d~~~~~~~~~~e~~~~L~~aGF~ive~ 210 (230)
T d1g8sa_ 184 DVTKDPKEIFKEQKEILEAGGFKIVDE 210 (230)
T ss_dssp CSSSCHHHHHHHHHHHHHHHTEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCEEEEE
Confidence 2222222 2333444444445665533
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=97.41 E-value=2.6e-05 Score=72.12 Aligned_cols=95 Identities=20% Similarity=0.256 Sum_probs=62.3
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----ccccccc--ccCCCCCCCCCccchhhhc-Cccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLIGVYH--DWCEPFSTYPRTYDLIHVS-GIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLiG~~h--dwce~fstYPrtyDLiHa~-~~fs 446 (527)
++|||+|||.|.++-.|.+... +|+=+|.. +.|.++-+| |+--.++ |..+ |+ .+++||+|=|. +.|.
T Consensus 39 ~~vLDiGCG~G~~~~~l~~~g~---~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~i~~~~~~~~ 113 (246)
T d1y8ca_ 39 DDYLDLACGTGNLTENLCPKFK---NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISN-LN-INRKFDLITCCLDSTN 113 (246)
T ss_dssp TEEEEETCTTSTTHHHHGGGSS---EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGG-CC-CSCCEEEEEECTTGGG
T ss_pred CeEEEEeCcCCHHHHHHHHhCC---ccEeeccchhhhhhccccccccCccceeeccchhh-hc-ccccccccceeeeeee
Confidence 5799999999999999988775 34445554 666666554 4321111 2222 22 36899988653 3344
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
... +.=++..+|-+|-|.|+|||.+|+.
T Consensus 114 ~~~------~~~~~~~~l~~~~~~LkpgG~~i~~ 141 (246)
T d1y8ca_ 114 YII------DSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp GCC------SHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ccC------CHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 332 2123456899999999999999974
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=97.39 E-value=6.4e-05 Score=71.99 Aligned_cols=66 Identities=11% Similarity=0.170 Sum_probs=50.3
Q ss_pred cChHHHHHHHHHc----C-C-CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCC
Q 009719 164 DSHKAQIQFALER----G-I-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 164 D~seaqvq~A~eR----g-~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
|.++.+++.|+++ + . ...+..+|.... +++++||+|++. .++... +|.++.|+|||||+|++..|.
T Consensus 117 D~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~-~~~~~fD~V~ld-----~p~p~~-~l~~~~~~LKpGG~lv~~~P~ 188 (250)
T d1yb2a1 117 ERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF-ISDQMYDAVIAD-----IPDPWN-HVQKIASMMKPGSVATFYLPN 188 (250)
T ss_dssp CSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC-CCSCCEEEEEEC-----CSCGGG-SHHHHHHTEEEEEEEEEEESS
T ss_pred ECCHHHHHHHHHHHHHhcCCCceEEEEeeeecc-cccceeeeeeec-----CCchHH-HHHHHHHhcCCCceEEEEeCC
Confidence 7788999999864 2 2 245666776554 678999999864 334444 899999999999999999883
|
| >d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Guanidinoacetate methyltransferase domain: Guanidinoacetate methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.34 E-value=9.4e-06 Score=75.44 Aligned_cols=101 Identities=13% Similarity=0.126 Sum_probs=60.0
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc------ccccccccCCCCCCCC-CccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG------LIGVYHDWCEPFSTYP-RTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG------LiG~~hdwce~fstYP-rtyDLiHa~~~fs 446 (527)
.+|||+|||.|.+|.+|.+.+.- +|+=.+-. ..+..+-++. +..+.+++..-...+| .+||+|-.+...+
T Consensus 55 ~~VLdIGcG~G~~a~~~a~~~~~--~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~fD~~~~ 132 (229)
T d1zx0a1 55 GRVLEVGFGMAIAASKVQEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 132 (229)
T ss_dssp EEEEEECCTTSHHHHHHHTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CeEEEeeccchHHHHHHHHcCCC--eEEEeCCCHHHHHHHHHHhhhcccccccccccccccccccccccccceeeccccc
Confidence 57999999999999999776531 22223322 4555554443 1233444444333445 5777765433332
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
... ..+.-....++-|+=|+|||||.+++-+
T Consensus 133 ~~~----~~~~~~~~~~~~~~~r~LkpGG~~~~~~ 163 (229)
T d1zx0a1 133 SEE----TWHTHQFNFIKNHAFRLLKPGGVLTYCN 163 (229)
T ss_dssp BGG----GTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ccc----cccccCHHHHHHHHHHHcCCCcEEEEEe
Confidence 221 1122234568889999999999999853
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.26 E-value=3.5e-05 Score=75.05 Aligned_cols=116 Identities=15% Similarity=0.138 Sum_probs=66.5
Q ss_pred HHHHHHHHhhh--ccCCCCeeeEeecCCCccchhhhccCCC-eeEEEecCCCCC-CchhHhhhccccc---cccccCCCC
Q 009719 357 RVAYYKNTLNV--KLGTPAIRNIMDMNAFFGGFAAALTSDP-VWVMNVVPARKS-STLSVIYDRGLIG---VYHDWCEPF 429 (527)
Q Consensus 357 ~v~~Y~~~l~~--~i~~~~iRnvmDm~ag~GgFaAaL~~~~-VwvMnvvp~~~~-ntl~vi~eRGLiG---~~hdwce~f 429 (527)
|...|.+.+.. .+..+ .+|||+|||.|.++-.+.+.. --|..|-+...- .....+-..|+.. +.+.--+-+
T Consensus 17 R~~~y~~ai~~~~~~~~~--~~VLDiGcG~G~ls~~aa~~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~ 94 (316)
T d1oria_ 17 RTLTYRNSMFHNRHLFKD--KVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEV 94 (316)
T ss_dssp HHHHHHHHHHTCHHHHTT--CEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTC
T ss_pred HHHHHHHHHHhccccCCc--CEEEEEecCCcHHHHHHHHhCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHc
Confidence 34556665532 12233 469999999998765444332 233333332211 3334555567633 222222233
Q ss_pred CCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 430 STYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 430 stYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
..-+..+|+|-+.-+..... +.-.++.++-+++|+|+|||.+|-.
T Consensus 95 ~~~~~~~D~ivs~~~~~~l~------~e~~~~~~l~~~~r~Lkp~G~iiP~ 139 (316)
T d1oria_ 95 ELPVEKVDIIISEWMGYCLF------YESMLNTVLHARDKWLAPDGLIFPD 139 (316)
T ss_dssp CCSSSCEEEEEECCCBBTBT------BTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccceeEEEeeeeeeeeec------cHHHHHHHHHHHHhcCCCCeEEEee
Confidence 33347899998765544332 3344678888999999999998843
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=97.21 E-value=4.3e-05 Score=73.22 Aligned_cols=111 Identities=14% Similarity=0.113 Sum_probs=68.3
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhh----hccccccc--cccCCCCCCCC-CccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIY----DRGLIGVY--HDWCEPFSTYP-RTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~----eRGLiG~~--hdwce~fstYP-rtyDLiHa~~~fs 446 (527)
..|||+|||.|.++.++....-=| +-+|-. ..+..+- ..|+-..+ .|.-+. .| .+||+|.|+-++.
T Consensus 122 ~~VLDiGcGsG~l~i~aa~~g~~V---~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~~---~~~~~fD~V~ani~~~ 195 (254)
T d2nxca1 122 DKVLDLGTGSGVLAIAAEKLGGKA---LGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA---LPFGPFDLLVANLYAE 195 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEE---EEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH---GGGCCEEEEEEECCHH
T ss_pred CEEEEcccchhHHHHHHHhcCCEE---EEEECChHHHHHHHHHHHHcCCceeEEecccccc---ccccccchhhhccccc
Confidence 379999999999988876554322 222322 3333332 23442111 111122 33 6899999864443
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeCC-HHHHHHHHHHHhcCCceeEEe
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-PEVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-~~~~~~i~~i~~~l~W~~~~~ 503 (527)
. +..++=++-|+|+|||.+|+++- .+..+.|.+.++..-|+....
T Consensus 196 ~------------l~~l~~~~~~~LkpGG~lilSgil~~~~~~v~~~~~~~Gf~~~~~ 241 (254)
T d2nxca1 196 L------------HAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEE 241 (254)
T ss_dssp H------------HHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEE
T ss_pred c------------HHHHHHHHHHhcCCCcEEEEEecchhhHHHHHHHHHHCCCEEEEE
Confidence 2 24566788999999999999863 233566777777778876544
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.09 E-value=0.0001 Score=69.33 Aligned_cols=133 Identities=14% Similarity=0.179 Sum_probs=75.8
Q ss_pred eEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhhhccc-cccccccCCCC--CCCCCccchhhhcCcccc
Q 009719 376 NIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIYDRGL-IGVYHDWCEPF--STYPRTYDLIHVSGIESL 447 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~eRGL-iG~~hdwce~f--stYPrtyDLiHa~~~fs~ 447 (527)
.|||+|||.|+++..|.+. .|+.+-+-|.-.......+-.|+. .-+..|-..+- .-..-.+|.|+++-...
T Consensus 76 ~VLDlGaGsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~i~~d~~~~- 154 (227)
T d1g8aa_ 76 SVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVAQP- 154 (227)
T ss_dssp EEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCCST-
T ss_pred EEEEeccCCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccccccccceEEEEEEcccc-
Confidence 7999999999999998642 355544443322233344445553 34444433221 11124567666541111
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeC----------CHHHHHHHHHHHhcCCceeE-EecCCCCCCCCceEE
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD----------SPEVIDKVSRIANTVRWTAA-VHDKEPGSNGREKIL 516 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird----------~~~~~~~i~~i~~~l~W~~~-~~~~e~~~~~~ekiL 516 (527)
=....++-++.|.|+|||+++|.. ...+..+++++.+. .++.. ..+.++... .--+.
T Consensus 155 ----------~~~~~~l~~~~~~LkpgG~lvi~~ka~~~~~~~~~~~v~~~v~~l~~~-gf~iie~i~L~p~~~-~H~~v 222 (227)
T d1g8aa_ 155 ----------TQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVERELSE-YFEVIERLNLEPYEK-DHALF 222 (227)
T ss_dssp ----------THHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHHHT-TSEEEEEEECTTTSS-SEEEE
T ss_pred ----------chHHHHHHHHHHhcccCCeEEEEEECCccCCCCCHHHHHHHHHHHHHc-CCEEEEEEcCCCCCC-ceEEE
Confidence 012468999999999999999862 23456667776544 45543 335554332 23567
Q ss_pred EEEec
Q 009719 517 VATKS 521 (527)
Q Consensus 517 i~~K~ 521 (527)
|++|+
T Consensus 223 v~rK~ 227 (227)
T d1g8aa_ 223 VVRKT 227 (227)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 77774
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.08 E-value=5.6e-05 Score=73.83 Aligned_cols=99 Identities=11% Similarity=0.065 Sum_probs=59.2
Q ss_pred eeEeecCCCccchhhhccCCC-eeEEEecCCCC-CCchhHhhhccccc---cccccCCCCCCCCCccchhhhcCcccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDP-VWVMNVVPARK-SSTLSVIYDRGLIG---VYHDWCEPFSTYPRTYDLIHVSGIESLIK 449 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~-VwvMnvvp~~~-~ntl~vi~eRGLiG---~~hdwce~fstYPrtyDLiHa~~~fs~~~ 449 (527)
.+|||+|||+|.++..+.+.. --|.-+-.... .-....+-+.|+.. +++.-.+.+..-+..||+|-+.-++....
T Consensus 40 ~~VLDlGcGtG~ls~~aa~~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~~~~~~D~i~se~~~~~~~ 119 (328)
T d1g6q1_ 40 KIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLL 119 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTTBS
T ss_pred CEEEEeCCCCCHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhhccCcccceeEEEEEecceeec
Confidence 379999999998876665443 23333322211 12345566677643 22222233332237899998866554332
Q ss_pred CCCCCCCCCcccccceeecccccCCcEEEE
Q 009719 450 NPGSNKNSCSLVDLMVEMDRMLRPEGTVVV 479 (527)
Q Consensus 450 ~~~~~~~rC~~~~illEmDRILRP~G~~ii 479 (527)
..-.++.++.+++|+|+|||.+|=
T Consensus 120 ------~e~~~~~~~~a~~r~LkpgG~iiP 143 (328)
T d1g6q1_ 120 ------YESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp ------TTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ------cchhHHHHHHHHHhccCCCeEEEe
Confidence 223356789999999999998873
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.06 E-value=0.00026 Score=66.02 Aligned_cols=65 Identities=15% Similarity=0.150 Sum_probs=49.8
Q ss_pred cChHHHHHHHHHc----CC------CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEe
Q 009719 164 DSHKAQIQFALER----GI------PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 164 D~seaqvq~A~eR----g~------pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS 233 (527)
|.++.+++.|+++ +. ...+..+|+..++++++.||.|++..++.|.+ .++.++|||||+|++.
T Consensus 108 e~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~~~~~~fD~I~~~~~~~~ip-------~~l~~~LkpGG~LV~p 180 (224)
T d1i1na_ 108 DHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPVVP-------QALIDQLKPGGRLILP 180 (224)
T ss_dssp ESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEEECSBBSSCC-------HHHHHTEEEEEEEEEE
T ss_pred cCCHHHHHHHHHhccccCcccccccceEEEEeecccccchhhhhhhhhhhcchhhcC-------HHHHhhcCCCcEEEEE
Confidence 6677888877643 21 24566788888999999999999998876643 3577999999999985
Q ss_pred cC
Q 009719 234 GP 235 (527)
Q Consensus 234 ~p 235 (527)
..
T Consensus 181 v~ 182 (224)
T d1i1na_ 181 VG 182 (224)
T ss_dssp ES
T ss_pred Ec
Confidence 43
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.04 E-value=0.00032 Score=68.24 Aligned_cols=59 Identities=17% Similarity=0.094 Sum_probs=44.4
Q ss_pred HHHcCCC--cEEeeccccCCCCCCCcccEEEecCccccccc--ChHHHHHHHhhcccCCcEEE
Q 009719 173 ALERGIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA--YNATYLIEVDRLLRPGGYLV 231 (527)
Q Consensus 173 A~eRg~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d--~~~~aL~Ei~RVLRPGG~lv 231 (527)
+.+.+.. ..+..++.+.+++++++||+|+|..+..+... ....++.++.|+|||||.++
T Consensus 80 ~~~~~~~~~i~~i~~~~~~l~~~~~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii 142 (328)
T d1g6q1_ 80 VELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp HHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred HHHhCccccceEEEeehhhccCcccceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence 3444543 55677899999999999999999765544332 23348999999999999986
|
| >d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Phenylethanolamine N-methyltransferase, PNMTase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.02 E-value=7.7e-05 Score=70.58 Aligned_cols=44 Identities=16% Similarity=0.246 Sum_probs=35.3
Q ss_pred CCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 433 PRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 433 PrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+..||+|-+..+++... .++.++...|=++-|+|||||++|+.+
T Consensus 155 ~~~fD~V~~~~~l~~i~-----~~~~~~~~~l~~~~~~LkPGG~li~~~ 198 (263)
T d2g72a1 155 PLPADALVSAFCLEAVS-----PDLASFQRALDHITTLLRPGGHLLLIG 198 (263)
T ss_dssp CSSEEEEEEESCHHHHC-----SSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cCccCeeeeHHHHHHHc-----cCHHHHHHHHHHHHHHcCCCCEEEEec
Confidence 46899999888777542 244567788999999999999999985
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.96 E-value=6.4e-05 Score=69.62 Aligned_cols=141 Identities=14% Similarity=0.126 Sum_probs=74.2
Q ss_pred cCCCCeeeEeecCCCccchhhhccC---CC-eeEEEecCCCCCCchhHhhhccccccccccCCCCCCCCCccchhhhcCc
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTS---DP-VWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGI 444 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~---~~-VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwce~fstYPrtyDLiHa~~~ 444 (527)
++.|. .|||+|||.|+++.+|.+ .. |+-+-+-|.--..-...+-.|+.+-..+-=.+....|+..+|.+- -+
T Consensus 54 lkpg~--~VLDlGcG~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd--~v 129 (209)
T d1nt2a_ 54 LRGDE--RVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVD--LI 129 (209)
T ss_dssp CCSSC--EEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEE--EE
T ss_pred CCCCC--EEEEeCCcCCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccccccceEE--EE
Confidence 44443 799999999998887743 22 333332221101111233345544333222233334565555433 23
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEeCC----------HHHHHHHHHH-HhcCCceeEEecCCCCCCCCc
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS----------PEVIDKVSRI-ANTVRWTAAVHDKEPGSNGRE 513 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~----------~~~~~~i~~i-~~~l~W~~~~~~~e~~~~~~e 513 (527)
|.... +.-....+|.|+.|+|+|||++++-+. ..+...+.+. ..++... ...+.+ |..++
T Consensus 130 ~~~~~------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~d~~~~~~~~~~~~~~~l~~gf~i~-E~i~L~--P~~~~ 200 (209)
T d1nt2a_ 130 YQDIA------QKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGDFKIV-KHGSLM--PYHRD 200 (209)
T ss_dssp EECCC------STTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTTSEEE-EEEECT--TTCTT
T ss_pred Eeccc------ChhhHHHHHHHHHHHhccCCeEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEE-EEEccC--CCccC
Confidence 33221 223346789999999999999998641 2233333333 3333332 223344 55567
Q ss_pred eEEEEEecc
Q 009719 514 KILVATKSL 522 (527)
Q Consensus 514 kiLi~~K~~ 522 (527)
-++|.-+.|
T Consensus 201 H~~v~~~r~ 209 (209)
T d1nt2a_ 201 HIFIHAYRF 209 (209)
T ss_dssp EEEEEEEEC
T ss_pred cEEEEEEeC
Confidence 788877654
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.91 E-value=0.00059 Score=66.05 Aligned_cols=76 Identities=12% Similarity=0.134 Sum_probs=52.7
Q ss_pred eeEEeeccCcChHHHHHHHHHcCCC--cEEeeccccCCCCCCCcccEEEecCccccccc--ChHHHHHHHhhcccCCcEE
Q 009719 155 ILTLSFAPRDSHKAQIQFALERGIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA--YNATYLIEVDRLLRPGGYL 230 (527)
Q Consensus 155 V~~msiAp~D~seaqvq~A~eRg~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d--~~~~aL~Ei~RVLRPGG~l 230 (527)
|.+++.++ ......+.+...+.. ..+..++++.++++.++||+|+|....++... ....++.+++|+|||||.+
T Consensus 59 V~avd~s~--~~~~a~~~~~~n~~~~~v~~~~~~~~~~~~~~~~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~i 136 (316)
T d1oria_ 59 VIGIECSS--ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLI 136 (316)
T ss_dssp EEEEECST--THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEE
T ss_pred EEEEcCcH--HHhhhhhHHHHhCCccccceEeccHHHcccccceeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEE
Confidence 55555443 233334445555654 56777899999999999999998765544332 2234899999999999998
Q ss_pred EE
Q 009719 231 VI 232 (527)
Q Consensus 231 vi 232 (527)
+-
T Consensus 137 iP 138 (316)
T d1oria_ 137 FP 138 (316)
T ss_dssp ES
T ss_pred Ee
Confidence 73
|
| >d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Bacillus subtilis [TaxId: 1423]
Probab=96.89 E-value=0.00022 Score=65.84 Aligned_cols=119 Identities=6% Similarity=0.068 Sum_probs=67.7
Q ss_pred eeEeecCCCccchhhhccC--CCeeEEEecCCCCC--CchhHhhhccccccccccCCCC---CCCC-CccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTS--DPVWVMNVVPARKS--STLSVIYDRGLIGVYHDWCEPF---STYP-RTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~--~~VwvMnvvp~~~~--ntl~vi~eRGLiG~~hdwce~f---stYP-rtyDLiHa~~~fs 446 (527)
..|||+|||.|.|+..|.. .+.-+..|=....- ...+-+-++||=-+..-...+. ..+| .++|.++.....-
T Consensus 31 PlvLeIGcG~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~~l~~~~~~~~~d~v~i~fp~P 110 (204)
T d2fcaa1 31 PIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFSDP 110 (204)
T ss_dssp CEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESCCC
T ss_pred ceEEEEEecCcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchhhhhcccCchhhhccccccccc
Confidence 4699999999999998843 34433333322111 2334466677622111111111 1133 7888877643322
Q ss_pred cccCCCCCCCCCcc-cccceeecccccCCcEEEEe-CCHHHHHHHHHHHhc
Q 009719 447 LIKNPGSNKNSCSL-VDLMVEMDRMLRPEGTVVVR-DSPEVIDKVSRIANT 495 (527)
Q Consensus 447 ~~~~~~~~~~rC~~-~~illEmDRILRP~G~~iir-d~~~~~~~i~~i~~~ 495 (527)
..+ .....+..+ ..+|-||-|+|+|||.++|+ |..++.+.+.+....
T Consensus 111 ~~k--~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~TD~~~y~~~~~~~~~~ 159 (204)
T d2fcaa1 111 WPK--KRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSE 159 (204)
T ss_dssp CCS--GGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHH
T ss_pred cch--hhhcchhhhHHHHHHHHHHhCCCCcEEEEEECChHHHHHHHHHHHH
Confidence 111 001112222 46888999999999999775 777777777766553
|
| >d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.87 E-value=0.00028 Score=65.14 Aligned_cols=125 Identities=9% Similarity=0.094 Sum_probs=73.7
Q ss_pred eeEeecCCCccchhhhccC--CCeeEEEecCCCCC--CchhHhhhccc--cccc-cccCCCCCCCC-CccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTS--DPVWVMNVVPARKS--STLSVIYDRGL--IGVY-HDWCEPFSTYP-RTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~--~~VwvMnvvp~~~~--ntl~vi~eRGL--iG~~-hdwce~fstYP-rtyDLiHa~~~fs 446 (527)
..|||+|||.|.|...|.. .+.-++-+=..... ..+.-+-+.|| |-++ .|-.+-..-+| .++|.||.... .
T Consensus 33 plvLdIGcG~G~~~~~lA~~~p~~~~iGid~~~~~v~~a~~~~~~~~l~Ni~~~~~da~~l~~~~~~~~~~~i~i~fP-d 111 (204)
T d1yzha1 33 PIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS-D 111 (204)
T ss_dssp CEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC-C
T ss_pred CeEEEEeccCCHHHHHHHHHCCCCceEEEeccHHHHHHHHHhhhhhccccceeeecCHHHHhhhccCCceehhccccc-c
Confidence 4799999999999988843 34544444333221 33444556776 3222 23322222345 78999886421 2
Q ss_pred cccCCCCCCCCCcc-cccceeecccccCCcEEEE-eCCHHHHHHHHHHHhcCCceeE
Q 009719 447 LIKNPGSNKNSCSL-VDLMVEMDRMLRPEGTVVV-RDSPEVIDKVSRIANTVRWTAA 501 (527)
Q Consensus 447 ~~~~~~~~~~rC~~-~~illEmDRILRP~G~~ii-rd~~~~~~~i~~i~~~l~W~~~ 501 (527)
.|.. ....+|--+ ..+|-++-|+|+|||.++| +|..++.+.+.+......|...
T Consensus 112 Pw~K-~~h~krRl~~~~~l~~~~~~LkpgG~l~i~TD~~~Y~~~~le~~~~~~~~~~ 167 (204)
T d1yzha1 112 PWPK-KRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLN 167 (204)
T ss_dssp CCCS-GGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred cccc-hhhhhhhhhHHHHHHHHHHhCCCCcEEEEEECCccHHHHHHHHHHHCCcccc
Confidence 3320 001112222 4678889999999999977 5777777777666666666544
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=96.86 E-value=6.9e-05 Score=65.10 Aligned_cols=110 Identities=8% Similarity=0.069 Sum_probs=65.8
Q ss_pred HHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCCCchhHhhhcc----cc---cccc-------
Q 009719 358 VAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRG----LI---GVYH------- 423 (527)
Q Consensus 358 v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~ntl~vi~eRG----Li---G~~h------- 423 (527)
+.+|+..|. +..+ .-|||+|||.|-+|..|.++..=|.-|=++ ++.|..+-+|- .. +.+.
T Consensus 9 ~~~~~~~l~--~~~~--~rvLd~GCG~G~~a~~la~~G~~V~gvD~S--~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~ 82 (201)
T d1pjza_ 9 LQQYWSSLN--VVPG--ARVLVPLCGKSQDMSWLSGQGYHVVGAELS--EAAVERYFTERGEQPHITSQGDFKVYAAPGI 82 (201)
T ss_dssp HHHHHHHHC--CCTT--CEEEETTTCCSHHHHHHHHHCCEEEEEEEC--HHHHHHHHHHHCSCSEEEEETTEEEEECSSS
T ss_pred HHHHHHHcC--CCCC--CEEEEecCcCCHHHHHHHHcCCceEeeccc--HHHHHHHHHHhccccchhhhhhhhhcccccc
Confidence 445777665 4444 379999999999999998776544333221 13444443331 10 0000
Q ss_pred c-c-CCCCCC--CC-CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 424 D-W-CEPFST--YP-RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 424 d-w-ce~fst--YP-rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
+ . +..+.. ++ ..||+|.+..++.... .-....++-+|-|.|+|||.+++.
T Consensus 83 ~~~~~d~~~l~~~~~~~~D~i~~~~~l~~l~-------~~~~~~~~~~i~~~LkpgG~l~l~ 137 (201)
T d1pjza_ 83 EIWCGDFFALTARDIGHCAAFYDRAAMIALP-------ADMRERYVQHLEALMPQACSGLLI 137 (201)
T ss_dssp EEEEECCSSSTHHHHHSEEEEEEESCGGGSC-------HHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred ceecccccccccccccceeEEEEEeeeEecc-------hhhhHHHHHHHHHhcCCCcEEEEE
Confidence 0 0 111222 22 6799999887776542 122346788899999999998775
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.84 E-value=0.00017 Score=67.79 Aligned_cols=131 Identities=13% Similarity=0.108 Sum_probs=76.2
Q ss_pred eEeecCCCccchhhhccCC----CeeEEEecCCCCCCchhHhhhccc-cccccccCCCCCCCCCccchhhhcCccccccC
Q 009719 376 NIMDMNAFFGGFAAALTSD----PVWVMNVVPARKSSTLSVIYDRGL-IGVYHDWCEPFSTYPRTYDLIHVSGIESLIKN 450 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~----~VwvMnvvp~~~~ntl~vi~eRGL-iG~~hdwce~fstYPrtyDLiHa~~~fs~~~~ 450 (527)
.|||+|||.|.++..|.+. .|+-+.+.|.--..-...+-.|+. +-+..|...+....+.++|.+-+...+.
T Consensus 77 ~VLDlGcGsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~i~~~~~---- 152 (230)
T d1g8sa_ 77 KILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYEDVA---- 152 (230)
T ss_dssp EEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC----
T ss_pred EEEEeCEEcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcccccccceeEEeecccc----
Confidence 6999999999998888542 255555554322222233444553 4455565554432235555433322233
Q ss_pred CCCCCCCCcccccceeecccccCCcEEEEeC----------CHHHHHHHHHHHhcCCceeE-EecCCCCCCCCceEEE
Q 009719 451 PGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD----------SPEVIDKVSRIANTVRWTAA-VHDKEPGSNGREKILV 517 (527)
Q Consensus 451 ~~~~~~rC~~~~illEmDRILRP~G~~iird----------~~~~~~~i~~i~~~l~W~~~-~~~~e~~~~~~ekiLi 517 (527)
+......++.|+.|+|+|||+++|.+ ...+.+++.+.++.--.+.. ..|.+ +.+++-++|
T Consensus 153 -----~~~~~~~~l~~~~r~LKpgG~~~i~~k~~~~d~~~~~~~~~~e~~~~L~~aGF~ive~idL~--py~~~H~~v 223 (230)
T d1g8sa_ 153 -----QPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKEILEAGGFKIVDEVDIE--PFEKDHVMF 223 (230)
T ss_dssp -----STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHHHHHHHTEEEEEEEECT--TTSTTEEEE
T ss_pred -----chHHHHHHHHHHHHhcccCceEEEEeeccccCCCCCHHHHHHHHHHHHHHcCCEEEEEecCC--CCcCCeEEE
Confidence 22345678999999999999999973 12345566666655556543 33444 344555554
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.80 E-value=0.00079 Score=64.71 Aligned_cols=53 Identities=11% Similarity=0.071 Sum_probs=41.4
Q ss_pred cEEeeccccCCCCCCCcccEEEecCcccccccCh--HHHHHHHhhcccCCcEEEE
Q 009719 180 AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN--ATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 180 a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~--~~aL~Ei~RVLRPGG~lvi 232 (527)
..+..++++.+++++++||+|+|....++..... ..++...+|+|||||+++-
T Consensus 86 i~~~~~~~~~l~~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~iip 140 (311)
T d2fyta1 86 ITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP 140 (311)
T ss_dssp EEEEESCTTTSCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred ceEEEeeHHHhcCccccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEec
Confidence 5677789999999999999999976554443322 2477778999999999974
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.78 E-value=0.00023 Score=65.48 Aligned_cols=117 Identities=12% Similarity=-0.014 Sum_probs=70.8
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----------------------cc-cccc-cccCCCCC
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----------------------GL-IGVY-HDWCEPFS 430 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----------------------GL-iG~~-hdwce~fs 430 (527)
.|||.|||.|-.+-.|.++.-=|..| |.. ..+..+.++ |. +-.+ .|.-+--+
T Consensus 48 rvLd~GCG~G~~a~~LA~~G~~V~gv---D~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~ 124 (229)
T d2bzga1 48 RVFFPLCGKAVEMKWFADRGHSVVGV---EISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFDLPR 124 (229)
T ss_dssp EEEETTCTTCTHHHHHHHTTCEEEEE---CSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGGGGG
T ss_pred EEEEeCCCCcHHHHHHHhCCCcEEEE---eCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhhccc
Confidence 69999999999999998887644433 433 333222221 10 0001 11111112
Q ss_pred CCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC----C------HH--HHHHHHHHHhcCCc
Q 009719 431 TYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD----S------PE--VIDKVSRIANTVRW 498 (527)
Q Consensus 431 tYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird----~------~~--~~~~i~~i~~~l~W 498 (527)
....+||+|....+|-... .=..+.++-+|-|+|||||++++.. . +- .-++++++... .|
T Consensus 125 ~~~~~fd~i~~~~~l~~~~-------~~~r~~~~~~~~~~LkpgG~~~l~~~~~~~~~~~gpp~~~~~~el~~lf~~-~~ 196 (229)
T d2bzga1 125 TNIGKFDMIWDRGALVAIN-------PGDRKCYADTMFSLLGKKFQYLLCVLSYDPTKHPGPPFYVPHAEIERLFGK-IC 196 (229)
T ss_dssp SCCCCEEEEEESSSTTTSC-------GGGHHHHHHHHHHTEEEEEEEEEEEEECCTTTCCCSSCCCCHHHHHHHHTT-TE
T ss_pred cccCceeEEEEEEEEEecc-------chhhHHHHHHHHhhcCCcceEEEEEcccCCCCCCCCCCCCCHHHHHHHhcC-CC
Confidence 3457899999888887553 2234678899999999999877752 1 00 24567777765 47
Q ss_pred eeEEe
Q 009719 499 TAAVH 503 (527)
Q Consensus 499 ~~~~~ 503 (527)
++...
T Consensus 197 ~i~~l 201 (229)
T d2bzga1 197 NIRCL 201 (229)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76544
|
| >d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein TM0748 species: Thermotoga maritima [TaxId: 2336]
Probab=96.75 E-value=0.0019 Score=61.83 Aligned_cols=66 Identities=14% Similarity=0.177 Sum_probs=48.5
Q ss_pred cChHHHHHHHHHc----CCC-c-EEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCC
Q 009719 164 DSHKAQIQFALER----GIP-A-FVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a-~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
|.++.+++.|+++ ++. . .+...|. ...|+...||.|+ +|.++... +|.++.|+|||||+|++..|.
T Consensus 135 D~~~~~~~~A~~~~~~~g~~~~v~~~~~d~-~~~~~~~~~D~V~-----~d~p~p~~-~l~~~~~~LKpGG~lv~~~P~ 206 (266)
T d1o54a_ 135 EKREEFAKLAESNLTKWGLIERVTIKVRDI-SEGFDEKDVDALF-----LDVPDPWN-YIDKCWEALKGGGRFATVCPT 206 (266)
T ss_dssp CCCHHHHHHHHHHHHHTTCGGGEEEECCCG-GGCCSCCSEEEEE-----ECCSCGGG-THHHHHHHEEEEEEEEEEESS
T ss_pred eCCHHHHHHHHHHHHHhccccCcEEEeccc-cccccccceeeeE-----ecCCCHHH-HHHHHHhhcCCCCEEEEEeCc
Confidence 7788899888764 443 2 2333343 4467888999986 35666665 999999999999999998873
|
| >d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein FLJ20628 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.67 E-value=0.00077 Score=66.53 Aligned_cols=68 Identities=13% Similarity=0.083 Sum_probs=44.5
Q ss_pred cChHHHHHHHHHc--------------CC--CcEEeeccccCCC--CCCCcccEEEecCcccccccChHHHHHHHhhccc
Q 009719 164 DSHKAQIQFALER--------------GI--PAFVAMLGTRRLP--FPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLR 225 (527)
Q Consensus 164 D~seaqvq~A~eR--------------g~--pa~~~v~dae~LP--FpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLR 225 (527)
|.++.+++.|+++ +. ...+...|..... +++.+||.|+.. .+++.. +|.++.|+||
T Consensus 130 E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~di~~~~~~~~~~~fD~V~LD-----~p~P~~-~l~~~~~~LK 203 (324)
T d2b25a1 130 EVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSLTFDAVALD-----MLNPHV-TLPVFYPHLK 203 (324)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-------EEEEEEC-----SSSTTT-THHHHGGGEE
T ss_pred cCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecchhhcccccCCCCcceEeec-----CcCHHH-HHHHHHHhcc
Confidence 6678888888753 11 2345566665553 468899999863 333334 8999999999
Q ss_pred CCcEEEEecCCC
Q 009719 226 PGGYLVISGPPV 237 (527)
Q Consensus 226 PGG~lviS~pp~ 237 (527)
|||+|++..|.+
T Consensus 204 pGG~lv~~~P~i 215 (324)
T d2b25a1 204 HGGVCAVYVVNI 215 (324)
T ss_dssp EEEEEEEEESSH
T ss_pred CCCEEEEEeCCH
Confidence 999999988843
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=96.49 E-value=0.00032 Score=64.73 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=56.7
Q ss_pred HHHHHHHhhhccCCCCeeeEeecCCCccchhhhcc---CCC--eeEEEecCCCCCCchhH-hhhccccccccccCCCCCC
Q 009719 358 VAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALT---SDP--VWVMNVVPARKSSTLSV-IYDRGLIGVYHDWCEPFST 431 (527)
Q Consensus 358 v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~---~~~--VwvMnvvp~~~~ntl~v-i~eRGLiG~~hdwce~fst 431 (527)
+....+.++ ++.|. +|||+|||+|.++|.|. ... |+....-|.-. +...- +-..|+-.+..-.......
T Consensus 64 ~a~~l~~l~--l~~g~--~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~-~~a~~~~~~~~~~n~~~~~~d~~~~ 138 (213)
T d1dl5a1 64 MALFMEWVG--LDKGM--RVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKIC-EIAKRNVERLGIENVIFVCGDGYYG 138 (213)
T ss_dssp HHHHHHHTT--CCTTC--EEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred hHHHHHhhh--ccccc--eEEEecCccchhHHHHHHHhCCCCcEEEeecchhhH-HHhhhhHhhhcccccccccCchHHc
Confidence 344455555 66664 89999999999988773 333 44433322211 11111 1122332222112233344
Q ss_pred CC--CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 432 YP--RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 432 YP--rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
+| .+||.|++...+... .-++=|.|+|||.+|+-
T Consensus 139 ~~~~~~fD~I~~~~~~~~~---------------p~~l~~~LkpGG~lv~p 174 (213)
T d1dl5a1 139 VPEFSPYDVIFVTVGVDEV---------------PETWFTQLKEGGRVIVP 174 (213)
T ss_dssp CGGGCCEEEEEECSBBSCC---------------CHHHHHHEEEEEEEEEE
T ss_pred cccccchhhhhhhccHHHh---------------HHHHHHhcCCCcEEEEE
Confidence 44 679999997655422 22334679999999883
|
| >d1af7a2 c.66.1.8 (A:92-284) Chemotaxis receptor methyltransferase CheR, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Chemotaxis receptor methyltransferase CheR, C-terminal domain domain: Chemotaxis receptor methyltransferase CheR, C-terminal domain species: Salmonella typhimurium [TaxId: 90371]
Probab=96.48 E-value=0.00064 Score=61.67 Aligned_cols=45 Identities=24% Similarity=0.351 Sum_probs=37.9
Q ss_pred CCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 191 PFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 191 PFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.+.+.||+|.|..+|+++.... ..++..+++.|+|||+|++...
T Consensus 127 ~~~~~~fDvI~CRNVLiYf~~~~~~~vl~~l~~~L~pGG~L~lG~s 172 (193)
T d1af7a2 127 YNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHS 172 (193)
T ss_dssp CCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECTT
T ss_pred cCCCCCccEEEeehhHHhcCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 34568999999999999987654 3599999999999999998654
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.34 E-value=0.0015 Score=61.13 Aligned_cols=68 Identities=9% Similarity=0.042 Sum_probs=45.6
Q ss_pred cChHHHHHHHHHc--CCC-cEEeeccc---cCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALER--GIP-AFVAMLGT---RRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eR--g~p-a~~~v~da---e~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++.|++.|+++ ..+ ......++ +..+.....||+|++. +.|. +....++.++.|+|||||+++++.
T Consensus 105 D~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~i~~d--~~~~-~~~~~~l~~~~~~LkpgG~lvi~~ 178 (227)
T d1g8aa_ 105 EFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED--VAQP-TQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp ESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC--CCST-THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eCcHHHHHHHHHHHHhcCCceEEEEECCCcccccccccceEEEEEE--cccc-chHHHHHHHHHHhcccCCeEEEEE
Confidence 5567788877654 222 22333343 4456667889999875 3343 333459999999999999999975
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=95.93 E-value=0.003 Score=59.07 Aligned_cols=63 Identities=10% Similarity=0.007 Sum_probs=45.2
Q ss_pred cChHHHHHHHHHc---CCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEe
Q 009719 164 DSHKAQIQFALER---GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 164 D~seaqvq~A~eR---g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS 233 (527)
|.++.+++.|+++ ...+.+..+|...-..+++.||.|++..++.+.++ ++.+.|||||+|++-
T Consensus 99 E~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~~~~~pfD~Iiv~~a~~~ip~-------~l~~qLk~GGrLV~p 164 (224)
T d1vbfa_ 99 EINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWATAPTLLC-------KPYEQLKEGGIMILP 164 (224)
T ss_dssp ESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSBBSSCCH-------HHHHTEEEEEEEEEE
T ss_pred cccHHHHHHHHHHHhcccccccccCchhhcchhhhhHHHHHhhcchhhhhH-------HHHHhcCCCCEEEEE
Confidence 5677888888765 22355666776554445788999999988766542 345789999999984
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=95.84 E-value=0.001 Score=65.05 Aligned_cols=90 Identities=18% Similarity=0.139 Sum_probs=59.4
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccC----CCCCCCcccEEEecC-cccc----
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRR----LPFPAFSFDIVHCSR-CLIP---- 208 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~----LPFpD~SFDlV~cs~-~l~h---- 208 (527)
+|+|+-++...+. ++...|.++.+++.|++. |+. ..+.++|+.. ++...+.||+|++.- ++..
T Consensus 156 tG~~s~~~a~g~~---~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~Vi~DpP~~~~~~~~ 232 (318)
T d1wxxa2 156 AGGFALHLALGFR---EVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKD 232 (318)
T ss_dssp TTHHHHHHHHHEE---EEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCSTTS
T ss_pred CcHHHHHHHhcCC---cEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHhhhcCCCEEEEcCCccccchHH
Confidence 7777777653332 344458888898888754 554 5566777533 566788999999752 1111
Q ss_pred cc---cChHHHHHHHhhcccCCcEEEEecC
Q 009719 209 FT---AYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 209 w~---d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.. ..-..++..+.++|||||.|++++-
T Consensus 233 ~~~~~~~~~~l~~~a~~lLkpGG~Lv~~sc 262 (318)
T d1wxxa2 233 VERAYRAYKEVNLRAIKLLKEGGILATASC 262 (318)
T ss_dssp HHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 10 0111378889999999999999875
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=95.65 E-value=0.0023 Score=60.77 Aligned_cols=92 Identities=15% Similarity=0.163 Sum_probs=57.6
Q ss_pred cCCCCeeeEeecCCCccchhhhccC---CCeeEEEecCCCCC-CchhHhhhc----ccc----ccccccCCCCCCCCCcc
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTS---DPVWVMNVVPARKS-STLSVIYDR----GLI----GVYHDWCEPFSTYPRTY 436 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~---~~VwvMnvvp~~~~-ntl~vi~eR----GLi----G~~hdwce~fstYPrty 436 (527)
|+.| .+|||+|||.|+++.+|.. ..=-|..+ +.. ..+..+-++ |.. -...|.++.+. ...|
T Consensus 83 i~pG--~rVLEiG~GsG~lt~~la~~v~~~g~V~~v---D~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~~--~~~f 155 (250)
T d1yb2a1 83 LRPG--MDILEVGVGSGNMSSYILYALNGKGTLTVV---ERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFIS--DQMY 155 (250)
T ss_dssp CCTT--CEEEEECCTTSHHHHHHHHHHTTSSEEEEE---CSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCC--SCCE
T ss_pred CCCc--CEEEEeeeeCcHHHHHHHHHhCCCcEEEEE---ECCHHHHHHHHHHHHHhcCCCceEEEEeeeecccc--ccee
Confidence 4555 3699999999999888753 22222222 222 344444432 322 23346666543 4789
Q ss_pred chhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 437 DLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 437 DLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
|.|..+ +-.. ..+|=++-|+|||||.+++.-
T Consensus 156 D~V~ld-~p~p-------------~~~l~~~~~~LKpGG~lv~~~ 186 (250)
T d1yb2a1 156 DAVIAD-IPDP-------------WNHVQKIASMMKPGSVATFYL 186 (250)
T ss_dssp EEEEEC-CSCG-------------GGSHHHHHHTEEEEEEEEEEE
T ss_pred eeeeec-CCch-------------HHHHHHHHHhcCCCceEEEEe
Confidence 998763 2233 347888999999999999864
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=95.55 E-value=0.0015 Score=58.19 Aligned_cols=116 Identities=16% Similarity=0.153 Sum_probs=67.0
Q ss_pred cCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----cccc---ccccccCCCCCCCCCccchhh
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGLI---GVYHDWCEPFSTYPRTYDLIH 440 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGLi---G~~hdwce~fstYPrtyDLiH 440 (527)
+..+. .|||+|||+|+++.+|...---|. -.|-. +-+..+-+ .|+- =+++.--+.+.+=...||+|=
T Consensus 31 ~~~g~--~VLDiGcGsG~~s~~lA~~~~~V~---avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~~~~~~~~~D~v~ 105 (186)
T d1l3ia_ 31 PGKND--VAVDVGCGTGGVTLELAGRVRRVY---AIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAV 105 (186)
T ss_dssp CCTTC--EEEEESCTTSHHHHHHHTTSSEEE---EEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEE
T ss_pred CCCCC--EEEEEECCeEcccccccccceEEE---EecCCHHHHHHHHHHHHHcCCCcceEEEECchhhcccccCCcCEEE
Confidence 44443 699999999999998866532232 23433 44444433 3441 112111010111125777765
Q ss_pred hcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-HHHHHHHHHHHhcCCceeE
Q 009719 441 VSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-PEVIDKVSRIANTVRWTAA 501 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-~~~~~~i~~i~~~l~W~~~ 501 (527)
+...- =.+..++-++-+.|||||++++..- .+....+.+.++...|+..
T Consensus 106 ~~~~~------------~~~~~~~~~~~~~LkpgG~lvi~~~~~e~~~~~~~~l~~~~~~~~ 155 (186)
T d1l3ia_ 106 VGGSG------------GELQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDVN 155 (186)
T ss_dssp ESCCT------------TCHHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCE
T ss_pred EeCcc------------ccchHHHHHHHHHhCcCCEEEEEeeccccHHHHHHHHHHcCCCeE
Confidence 43211 1246788899999999999999763 4555666667666666543
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.37 E-value=0.005 Score=59.98 Aligned_cols=91 Identities=18% Similarity=0.142 Sum_probs=60.2
Q ss_pred hhccccccccCCee-EEeeccCcChHHHHHHHHHc----CCC--cEEeecccc----CCCCCCCcccEEEecC-cccccc
Q 009719 143 VASFGGSMLSENIL-TLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTR----RLPFPAFSFDIVHCSR-CLIPFT 210 (527)
Q Consensus 143 vgsfga~Ll~r~V~-~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae----~LPFpD~SFDlV~cs~-~l~hw~ 210 (527)
+|.|+-+++..|.. ++++ |.++..++.|++. |+. ..+.++|+. .++.....||+|++.- ++..-.
T Consensus 156 ~G~~si~~a~~ga~~V~~v---D~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~fD~Vi~DpP~~~~~~ 232 (324)
T d2as0a2 156 TGGFAIHAAIAGADEVIGI---DKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQHE 232 (324)
T ss_dssp TTHHHHHHHHTTCSEEEEE---ESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCSSG
T ss_pred ccchhhhhhhcCCcEEEee---cCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCCCCchhcCCccccCCH
Confidence 67888888777753 3333 7788888888653 553 456667753 3566789999999752 111100
Q ss_pred cC-------hHHHHHHHhhcccCCcEEEEecCC
Q 009719 211 AY-------NATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 211 d~-------~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
.. -..++....++|||||.|++++..
T Consensus 233 ~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s 265 (324)
T d2as0a2 233 KDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 265 (324)
T ss_dssp GGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 00 012678889999999999998753
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.53 E-value=0.01 Score=60.17 Aligned_cols=38 Identities=8% Similarity=0.072 Sum_probs=28.3
Q ss_pred cccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 196 SFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 196 SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+|+|.+. +++|.++... +|.|+.|+|||||+++.+.+
T Consensus 297 ~adVV~in-n~~f~~~l~~-~L~ei~r~LKPGGrIVs~~~ 334 (406)
T d1u2za_ 297 QCDVILVN-NFLFDEDLNK-KVEKILQTAKVGCKIISLKS 334 (406)
T ss_dssp GCSEEEEC-CTTCCHHHHH-HHHHHHTTCCTTCEEEESSC
T ss_pred cceEEEEe-cccCchHHHH-HHHHHHHhcCCCcEEEEecc
Confidence 35677754 4556555444 99999999999999998754
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=94.40 E-value=0.021 Score=52.92 Aligned_cols=64 Identities=13% Similarity=0.151 Sum_probs=46.7
Q ss_pred cChHHHHHHHHHc---------C-CCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEe
Q 009719 164 DSHKAQIQFALER---------G-IPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 164 D~seaqvq~A~eR---------g-~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS 233 (527)
|.++..+++|+++ + ....+..+|......+.+.||.|++..++.+.++ .+.+.|||||++++-
T Consensus 117 E~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~~~~~~fD~Iiv~~a~~~~p~-------~l~~~Lk~gG~lV~p 189 (223)
T d1r18a_ 117 EHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTPT-------ELINQLASGGRLIVP 189 (223)
T ss_dssp ESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGGCSEEEEEECSCBSSCCH-------HHHHTEEEEEEEEEE
T ss_pred ecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccccccccceeeEEEEeechhchH-------HHHHhcCCCcEEEEE
Confidence 5567777777543 1 1345667888777778889999999988765442 356899999999984
Q ss_pred c
Q 009719 234 G 234 (527)
Q Consensus 234 ~ 234 (527)
.
T Consensus 190 v 190 (223)
T d1r18a_ 190 V 190 (223)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein TM0748 species: Thermotoga maritima [TaxId: 2336]
Probab=93.93 E-value=0.011 Score=56.29 Aligned_cols=111 Identities=14% Similarity=0.132 Sum_probs=62.9
Q ss_pred cCCCCeeeEeecCCCccchhhhccC---CCeeEEEecCCCCCCchhHh----hhcccccc----ccccCCCCCCCCCccc
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTS---DPVWVMNVVPARKSSTLSVI----YDRGLIGV----YHDWCEPFSTYPRTYD 437 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~---~~VwvMnvvp~~~~ntl~vi----~eRGLiG~----~hdwce~fstYPrtyD 437 (527)
|..|. +|||+|||.|+++++|.. ..--|..+-... ..+..+ -.-|+... ..|-++.|. ...||
T Consensus 101 i~pG~--~VLDiG~GsG~lt~~lA~~~~~~G~V~~vD~~~--~~~~~A~~~~~~~g~~~~v~~~~~d~~~~~~--~~~~D 174 (266)
T d1o54a_ 101 VKEGD--RIIDTGVGSGAMCAVLARAVGSSGKVFAYEKRE--EFAKLAESNLTKWGLIERVTIKVRDISEGFD--EKDVD 174 (266)
T ss_dssp CCTTC--EEEEECCTTSHHHHHHHHHTTTTCEEEEECCCH--HHHHHHHHHHHHTTCGGGEEEECCCGGGCCS--CCSEE
T ss_pred CCCCC--EEEECCCCCCHHHHHHHHHhCCCcEEEEEeCCH--HHHHHHHHHHHHhccccCcEEEecccccccc--cccee
Confidence 55553 799999999999888842 233333332221 223332 22244322 222233332 36677
Q ss_pred hhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-CHHHHHHHHHHHhcCCce
Q 009719 438 LIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDKVSRIANTVRWT 499 (527)
Q Consensus 438 LiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~i~~i~~~l~W~ 499 (527)
.+..+ -.+...+|-++-|+|||||.+++-- ..+.+.++-+.++...|.
T Consensus 175 ~V~~d--------------~p~p~~~l~~~~~~LKpGG~lv~~~P~~~Qv~~~~~~l~~~gF~ 223 (266)
T d1o54a_ 175 ALFLD--------------VPDPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFI 223 (266)
T ss_dssp EEEEC--------------CSCGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEE
T ss_pred eeEec--------------CCCHHHHHHHHHhhcCCCCEEEEEeCcccHHHHHHHHHHHCCce
Confidence 65431 2234568999999999999998753 444455555555555664
|
| >d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: COMT domain-containing protein 1, COMTD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.55 E-value=0.0093 Score=55.26 Aligned_cols=133 Identities=18% Similarity=0.146 Sum_probs=74.7
Q ss_pred CCCCeeeEeecCCCccchhhhccC---CCeeEEEecCCCCC--CchhHhhhccc---ccccc-ccCCCCCC-----CCCc
Q 009719 370 GTPAIRNIMDMNAFFGGFAAALTS---DPVWVMNVVPARKS--STLSVIYDRGL---IGVYH-DWCEPFST-----YPRT 435 (527)
Q Consensus 370 ~~~~iRnvmDm~ag~GgFaAaL~~---~~VwvMnvvp~~~~--ntl~vi~eRGL---iG~~h-dwce~fst-----YPrt 435 (527)
+..+-++|+++|+|+|-=+.+|.. .+--+..+-..... ..-+.+-.-|+ |-+.+ |-.|.++. .+.+
T Consensus 56 ~~~~~k~vLEiGt~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~e~l~~~~~~~~~~~ 135 (219)
T d2avda1 56 RLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGT 135 (219)
T ss_dssp HHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTC
T ss_pred HccCCCeEEEEechhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeehhhcchhhhhhcccCC
Confidence 334578999999999966666532 23333333322221 11222323333 11111 11121111 2568
Q ss_pred cchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC---------------HHHHHH-HHHHHhcCCce
Q 009719 436 YDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS---------------PEVIDK-VSRIANTVRWT 499 (527)
Q Consensus 436 yDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~---------------~~~~~~-i~~i~~~l~W~ 499 (527)
||||..++--+.| ..++-++=+.|||||.+|+.|- ...+.+ .+.|.+.-+|+
T Consensus 136 fD~ifiD~dk~~y------------~~~~~~~~~lL~~GGvii~Dn~l~~G~v~~~~~~d~~~~~ir~~~~~i~~d~r~~ 203 (219)
T d2avda1 136 FDVAVVDADKENC------------SAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVY 203 (219)
T ss_dssp EEEEEECSCSTTH------------HHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEE
T ss_pred ccEEEEeCCHHHH------------HHHHHHHHHHhcCCcEEEEeCCcccCcccCcccCCHHHHHHHHHHHHHHhCCCEE
Confidence 9999887433333 3445556689999999999862 112333 45567788999
Q ss_pred eEEecCCCCCCCCceEEEEEe
Q 009719 500 AAVHDKEPGSNGREKILVATK 520 (527)
Q Consensus 500 ~~~~~~e~~~~~~ekiLi~~K 520 (527)
..+. |. .+.|+||+|
T Consensus 204 ~~ll-----Pi-gdGl~ia~K 218 (219)
T d2avda1 204 ISLL-----PL-GDGLTLAFK 218 (219)
T ss_dssp EEEE-----CS-TTCEEEEEE
T ss_pred EEEe-----ec-CCeeEEEEe
Confidence 8876 22 256999998
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=93.33 E-value=0.012 Score=57.25 Aligned_cols=91 Identities=13% Similarity=0.135 Sum_probs=54.8
Q ss_pred hhccccccccCCee-EEeeccCcChHHHHHHHHH----cCCC---cEEeecccc----CCCCCCCcccEEEec---C---
Q 009719 143 VASFGGSMLSENIL-TLSFAPRDSHKAQIQFALE----RGIP---AFVAMLGTR----RLPFPAFSFDIVHCS---R--- 204 (527)
Q Consensus 143 vgsfga~Ll~r~V~-~msiAp~D~seaqvq~A~e----Rg~p---a~~~v~dae----~LPFpD~SFDlV~cs---~--- 204 (527)
+|+|+-++...|.. ++++ |.++..++.|++ .|+. ..+..+|+. .+.-..+.||+|++. .
T Consensus 155 ~G~~sl~aa~~ga~~V~~v---D~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~~l~~~~~~~~~fD~Ii~DPP~f~~~ 231 (317)
T d2b78a2 155 TAAFSVAAAMGGAMATTSV---DLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARN 231 (317)
T ss_dssp TTHHHHHHHHTTBSEEEEE---ESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC---
T ss_pred CcHHHHHHHhCCCceEEEe---cCCHHHHHHHHHHHHHhcccCcceEEEEccHHHHHHHHHhhcCCCCEEEEcChhhccc
Confidence 78888776665552 3333 445555555543 2442 456777762 233356789999974 1
Q ss_pred --cccccccChHHHHHHHhhcccCCcEEEEecCC
Q 009719 205 --CLIPFTAYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 205 --~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
.+..-..+-..++....++|+|||.|++++..
T Consensus 232 ~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~scs 265 (317)
T d2b78a2 232 KKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA 265 (317)
T ss_dssp --CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 11111111123788889999999999998863
|
| >d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: Catechol O-methyltransferase, COMT species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.13 E-value=0.0019 Score=59.71 Aligned_cols=120 Identities=13% Similarity=0.205 Sum_probs=66.3
Q ss_pred CCCCeeeEeecCCCccchhhhccC---CCeeEEEec--CCCCCCchhHhhhccccc---cc-cccCCCCCC----C-CCc
Q 009719 370 GTPAIRNIMDMNAFFGGFAAALTS---DPVWVMNVV--PARKSSTLSVIYDRGLIG---VY-HDWCEPFST----Y-PRT 435 (527)
Q Consensus 370 ~~~~iRnvmDm~ag~GgFaAaL~~---~~VwvMnvv--p~~~~ntl~vi~eRGLiG---~~-hdwce~fst----Y-Prt 435 (527)
...+-++|+++|+|.|..+.+|.. ..-.|..+- |......-..+-.-|+-. ++ .|..|.++. + ..+
T Consensus 53 ~~~kpk~ILEiGt~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~e~l~~l~~~~~~~~ 132 (214)
T d2cl5a1 53 REYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDT 132 (214)
T ss_dssp HHHCCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGHHHHSCCCC
T ss_pred HhhCCCEEEEEccCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeeccccccccchhhcccccc
Confidence 334568999999999987776632 333333332 211112222333446411 11 112222222 2 267
Q ss_pred cchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-----CHHHHHHHHHHHhcCCceeEE
Q 009719 436 YDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-----SPEVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 436 yDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-----~~~~~~~i~~i~~~l~W~~~~ 502 (527)
||+|..++-.+.+. ....+.|.-|+|||||.+|+.| ..+.+..|++ .=+|+...
T Consensus 133 ~D~ifiD~~~~~~~----------~~~~l~~~~~lLkpGGvIv~Ddvl~~g~~~~~~~vr~---~~~~~~~~ 191 (214)
T d2cl5a1 133 LDMVFLDHWKDRYL----------PDTLLLEKCGLLRKGTVLLADNVIVPGTPDFLAYVRG---SSSFECTH 191 (214)
T ss_dssp EEEEEECSCGGGHH----------HHHHHHHHTTCEEEEEEEEESCCCCCCCHHHHHHHHH---CTTEEEEE
T ss_pred cceeeecccccccc----------cHHHHHHHhCccCCCcEEEEeCcCCCCChHHHHHHhc---cCceeehh
Confidence 99998875444332 1234667789999999988876 3556666654 34565543
|
| >d1eg2a_ c.66.1.11 (A:) m.RsrI N6 adenosine-specific DNA methyltransferase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Type II DNA methylase domain: m.RsrI N6 adenosine-specific DNA methyltransferase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=93.07 E-value=0.072 Score=48.44 Aligned_cols=54 Identities=22% Similarity=0.432 Sum_probs=36.7
Q ss_pred EeeccccCC--CCCCCcccEEEecC----cccccc------cChHHHHHHHhhcccCCcEEEEecC
Q 009719 182 VAMLGTRRL--PFPAFSFDIVHCSR----CLIPFT------AYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 182 ~~v~dae~L--PFpD~SFDlV~cs~----~l~hw~------d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.++|...+ -+||+|+|+|+++= ....|. +.....+.|+.|||||||.+++...
T Consensus 7 ~~~~D~le~l~~l~d~SIDliitDPPYn~~~~~~~~~~~y~~~~~~~~~e~~rvLk~~G~~~~~~~ 72 (279)
T d1eg2a_ 7 YDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 72 (279)
T ss_dssp EEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEechHHHHHhhCcCCCccEEEECCCCCCCcccccCHHHHHHHHHHHHHHHHHHhCCCccEEEecC
Confidence 455564332 36799999999872 222221 2223478999999999999999765
|
| >d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Chalcone O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=92.94 E-value=0.019 Score=53.80 Aligned_cols=53 Identities=13% Similarity=0.086 Sum_probs=40.4
Q ss_pred cEEeeccccCCCCCCCcccEEEecCcccccccChH-HHHHHHhhcccCCcEEEEecC
Q 009719 180 AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA-TYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 180 a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~-~aL~Ei~RVLRPGG~lviS~p 235 (527)
..+..+|.. -|.| ..|++++++++|+|++... .+|+.+.+.|+|||++++...
T Consensus 126 i~~~~gd~~-~~~p--~~D~~~l~~vLh~~~de~~~~iL~~~~~aL~pgg~llI~e~ 179 (244)
T d1fp1d2 126 IEHVGGDMF-ASVP--QGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEF 179 (244)
T ss_dssp EEEEECCTT-TCCC--CEEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEecCCcc-cccc--cceEEEEehhhhhCCHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence 344445542 2444 3499999999999988764 489999999999999999763
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=92.87 E-value=0.065 Score=47.06 Aligned_cols=87 Identities=20% Similarity=0.277 Sum_probs=56.1
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeecccc----CCCCCCCcccEEEecCcccccccChH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTR----RLPFPAFSFDIVHCSRCLIPFTAYNA 214 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae----~LPFpD~SFDlV~cs~~l~hw~d~~~ 214 (527)
+|++|-..+.+|..++.+ |.++.+++.|++. ++...+...++. .+...+..||+|++.= +|..+..
T Consensus 52 ~G~~~i~a~~~ga~vv~v---D~~~~a~~~~~~N~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~If~DP---PY~~~~~ 125 (171)
T d1ws6a1 52 SGAVGLEAASEGWEAVLV---EKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP---PYAMDLA 125 (171)
T ss_dssp SCHHHHHHHHTTCEEEEE---CCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC---CTTSCTT
T ss_pred cchhhhhhhhccchhhhc---ccCHHHHhhhhHHHHhhccccceeeeehhcccccccccCCccceeEEcc---ccccCHH
Confidence 566777778888866544 8888888877643 565555444432 2345678899999852 2222222
Q ss_pred HHHHHH--hhcccCCcEEEEecC
Q 009719 215 TYLIEV--DRLLRPGGYLVISGP 235 (527)
Q Consensus 215 ~aL~Ei--~RVLRPGG~lviS~p 235 (527)
..+.++ ...|+|||++++..+
T Consensus 126 ~~l~~l~~~~ll~~~g~ivie~~ 148 (171)
T d1ws6a1 126 ALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp HHHHHHHHHTCEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCcCCCeEEEEEec
Confidence 244444 368999999999665
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=92.72 E-value=0.033 Score=51.35 Aligned_cols=64 Identities=17% Similarity=0.222 Sum_probs=44.7
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
+..+.++++|+++ |+. +.+..+|......+.+.||.|++.-++.+.++ . +...|||||++++-.
T Consensus 108 e~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~~~~~pfD~Iiv~~a~~~ip~----~---l~~qL~~gGrLv~pv 176 (215)
T d1jg1a_ 108 ERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIVTAGAPKIPE----P---LIEQLKIGGKLIIPV 176 (215)
T ss_dssp ESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSBBSSCCH----H---HHHTEEEEEEEEEEE
T ss_pred eccHHHHHHHHHHHHHcCCceeEEEECccccCCcccCcceeEEeecccccCCH----H---HHHhcCCCCEEEEEE
Confidence 3455666666643 544 56677887776667899999999887765443 2 345799999999743
|
| >d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Chalcone O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=92.48 E-value=0.012 Score=55.23 Aligned_cols=92 Identities=16% Similarity=0.250 Sum_probs=62.3
Q ss_pred CCCeeeEeecCCCccchhhhccCC----CeeEEEecCCCCCCchhHhhhcc----ccccccccCCCCCCCCCccchhhhc
Q 009719 371 TPAIRNIMDMNAFFGGFAAALTSD----PVWVMNVVPARKSSTLSVIYDRG----LIGVYHDWCEPFSTYPRTYDLIHVS 442 (527)
Q Consensus 371 ~~~iRnvmDm~ag~GgFaAaL~~~----~VwvMnvvp~~~~ntl~vi~eRG----LiG~~hdwce~fstYPrtyDLiHa~ 442 (527)
...++.|+|+|||.|.++++|.+. .+.|+..- ++|-+.+ +--+-+|. |...| ..|++...
T Consensus 79 f~~~~~vlDiGGG~G~~~~~l~~~~P~l~~~v~Dlp--------~vi~~~~~~~ri~~~~gd~---~~~~p-~~D~~~l~ 146 (244)
T d1fp1d2 79 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLP--------QVIENAPPLSGIEHVGGDM---FASVP-QGDAMILK 146 (244)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECH--------HHHTTCCCCTTEEEEECCT---TTCCC-CEEEEEEE
T ss_pred ccCCcEEEEecCCCcHHHHHHHHHCCCCeEEEecch--------hhhhccCCCCCeEEecCCc---ccccc-cceEEEEe
Confidence 578999999999999999999533 35555432 2222222 22233443 33445 45999999
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+++-.|.+ +. ...||-.+=+.|+|||.++|-|
T Consensus 147 ~vLh~~~d-----e~--~~~iL~~~~~aL~pgg~llI~e 178 (244)
T d1fp1d2 147 AVCHNWSD-----EK--CIEFLSNCHKALSPNGKVIIVE 178 (244)
T ss_dssp SSGGGSCH-----HH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhhCCH-----HH--HHHHHHHHHHHcCCCcEEEEEE
Confidence 99998851 11 2467788888999999999975
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=92.24 E-value=0.021 Score=53.04 Aligned_cols=89 Identities=15% Similarity=0.176 Sum_probs=47.3
Q ss_pred cCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc--cc--cccccccCCCCCCCC--Cccchhhh
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR--GL--IGVYHDWCEPFSTYP--RTYDLIHV 441 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR--GL--iG~~hdwce~fstYP--rtyDLiHa 441 (527)
++.+. .|||+|||+|-++|.|...-=-|..+ +-. ..+..+-++ +. +-+.+ ...+..|| ..||.|++
T Consensus 68 l~~g~--~VLdIG~GsGy~ta~La~l~~~V~ai---E~~~~~~~~A~~~~~~~~nv~~~~--~d~~~g~~~~~pfD~Iiv 140 (224)
T d1vbfa_ 68 LHKGQ--KVLEIGTGIGYYTALIAEIVDKVVSV---EINEKMYNYASKLLSYYNNIKLIL--GDGTLGYEEEKPYDRVVV 140 (224)
T ss_dssp CCTTC--EEEEECCTTSHHHHHHHHHSSEEEEE---ESCHHHHHHHHHHHTTCSSEEEEE--SCGGGCCGGGCCEEEEEE
T ss_pred hcccc--eEEEecCCCCHHHHHHHHHhcccccc---cccHHHHHHHHHHHhccccccccc--CchhhcchhhhhHHHHHh
Confidence 66665 79999999999988774432223222 222 222222111 11 11111 11122344 45999998
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEE
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVV 479 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~ii 479 (527)
...... +.-++=+.|+|||.+|+
T Consensus 141 ~~a~~~---------------ip~~l~~qLk~GGrLV~ 163 (224)
T d1vbfa_ 141 WATAPT---------------LLCKPYEQLKEGGIMIL 163 (224)
T ss_dssp SSBBSS---------------CCHHHHHTEEEEEEEEE
T ss_pred hcchhh---------------hhHHHHHhcCCCCEEEE
Confidence 654332 22233356999999887
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.05 E-value=0.0055 Score=56.75 Aligned_cols=102 Identities=16% Similarity=0.183 Sum_probs=50.6
Q ss_pred HHHHhhhccCCCCeeeEeecCCCccchhhhcc---CCC--eeEEEecCCCCCCchhHhhhccc--c--ccccccC-CCCC
Q 009719 361 YKNTLNVKLGTPAIRNIMDMNAFFGGFAAALT---SDP--VWVMNVVPARKSSTLSVIYDRGL--I--GVYHDWC-EPFS 430 (527)
Q Consensus 361 Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~---~~~--VwvMnvvp~~~~ntl~vi~eRGL--i--G~~hdwc-e~fs 430 (527)
-.+.|...++.| -+|||+|||+|-++|.|. ... |+..-..+.-.......+-..|+ + +..+-.+ ..+.
T Consensus 66 ~le~L~~~l~~g--~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~ 143 (224)
T d1i1na_ 66 ALELLFDQLHEG--AKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM 143 (224)
T ss_dssp HHHHTTTTSCTT--CEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG
T ss_pred HHHHHhhccCCC--CeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccc
Confidence 344443334444 369999999998776663 333 44432222100000011111222 1 1111111 1122
Q ss_pred CCC--CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEE
Q 009719 431 TYP--RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVV 479 (527)
Q Consensus 431 tYP--rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~ii 479 (527)
.+| ..||.|++..... .+.-++=+.|+|||.+|+
T Consensus 144 ~~~~~~~fD~I~~~~~~~---------------~ip~~l~~~LkpGG~LV~ 179 (224)
T d1i1na_ 144 GYAEEAPYDAIHVGAAAP---------------VVPQALIDQLKPGGRLIL 179 (224)
T ss_dssp CCGGGCCEEEEEECSBBS---------------SCCHHHHHTEEEEEEEEE
T ss_pred ccchhhhhhhhhhhcchh---------------hcCHHHHhhcCCCcEEEE
Confidence 233 6799999865443 233345578999999987
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=92.01 E-value=0.01 Score=57.67 Aligned_cols=117 Identities=20% Similarity=0.230 Sum_probs=64.1
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhh----hcccccc------ccccCCCCCCCCCccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIY----DRGLIGV------YHDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~----eRGLiG~------~hdwce~fstYPrtyDLiHa~~ 443 (527)
+.|||++||+|||+.++....- .|+-+|.. .-|..+- .-||-.+ .-+|.+.+...-.+||+|-++-
T Consensus 147 ~rVLDl~~gtG~~s~~~a~g~~---~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~Vi~Dp 223 (318)
T d1wxxa2 147 ERALDVFSYAGGFALHLALGFR---EVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 223 (318)
T ss_dssp EEEEEETCTTTHHHHHHHHHEE---EEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CeeeccCCCCcHHHHHHHhcCC---cEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHhhhcCCCEEEEcC
Confidence 6899999999999988864322 34444443 3333322 2233111 1112222222336899988752
Q ss_pred -ccccccCCCCCCCCCc-------ccccceeecccccCCcEEEEeC------CHHHHHHHHHHHhcCCceeEE
Q 009719 444 -IESLIKNPGSNKNSCS-------LVDLMVEMDRMLRPEGTVVVRD------SPEVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 444 -~fs~~~~~~~~~~rC~-------~~~illEmDRILRP~G~~iird------~~~~~~~i~~i~~~l~W~~~~ 502 (527)
+|+ +.+-. ...|+-..=++|+|||.+++.. ..+..+.|.+-+..-..+.++
T Consensus 224 P~~~--------~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs~~~~~~~f~~~v~~a~~~a~~~~~~ 288 (318)
T d1wxxa2 224 PAFA--------KGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRV 288 (318)
T ss_dssp CCSC--------CSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred Cccc--------cchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCCcccCHHHHHHHHHHHHHHcCCCEEE
Confidence 121 11111 1357778889999999999974 223444455555555555443
|
| >d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Met-10+ protein-like domain: Hypothetical protein PH0793 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=91.96 E-value=0.035 Score=52.38 Aligned_cols=135 Identities=12% Similarity=0.113 Sum_probs=73.3
Q ss_pred cccchhhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCC-eeEEEecCCCCCCchhHh----hhcccc
Q 009719 345 DVFEADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDP-VWVMNVVPARKSSTLSVI----YDRGLI 419 (527)
Q Consensus 345 ~~f~~d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~-VwvMnvvp~~~~ntl~vi----~eRGLi 419 (527)
-.|..++...+.++.. .++.| .+|+||+||+|+|+-.+...+ .-|..|=. .++.+..+ -.-||-
T Consensus 88 ~~f~~~~~~er~ri~~-------~~~~g--~~VlD~~aG~G~~~l~~a~~~~~~V~avd~--n~~a~~~~~~N~~~n~l~ 156 (260)
T d2frna1 88 IMFSPANVKERVRMAK-------VAKPD--ELVVDMFAGIGHLSLPIAVYGKAKVIAIEK--DPYTFKFLVENIHLNKVE 156 (260)
T ss_dssp SCCCGGGHHHHHHHHH-------HCCTT--CEEEETTCTTTTTHHHHHHHTCCEEEEECC--CHHHHHHHHHHHHHTTCT
T ss_pred ccEecCCHHHHHHHHh-------hcCCc--cEEEECcceEcHHHHHHHHhCCcEEEEecC--CHHHHHHHHHHHHHhCCC
Confidence 3466777777666533 23444 479999999999987654333 23332221 11323222 222442
Q ss_pred ccccccCCCCCCCC--CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-------CHHHHHHHH
Q 009719 420 GVYHDWCEPFSTYP--RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-------SPEVIDKVS 490 (527)
Q Consensus 420 G~~hdwce~fstYP--rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-------~~~~~~~i~ 490 (527)
+..+-.+.-...++ ..||.|..+-..+ -.+.|=+.=++|+|||++.+-+ ..+..+.++
T Consensus 157 ~~v~~~~~D~~~~~~~~~~D~Ii~~~p~~-------------~~~~l~~a~~~l~~gG~lh~~~~~~~~~~~~~~~e~~~ 223 (260)
T d2frna1 157 DRMSAYNMDNRDFPGENIADRILMGYVVR-------------THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFK 223 (260)
T ss_dssp TTEEEECSCTTTCCCCSCEEEEEECCCSS-------------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHH
T ss_pred ceEEEEEcchHHhccCCCCCEEEECCCCc-------------hHHHHHHHHhhcCCCCEEEEEeccccccchhhHHHHHH
Confidence 21111112222233 4688776432211 1345556678999999986643 123466778
Q ss_pred HHHhcCCceeEEe
Q 009719 491 RIANTVRWTAAVH 503 (527)
Q Consensus 491 ~i~~~l~W~~~~~ 503 (527)
++++...+++...
T Consensus 224 ~~~~~~g~~v~~~ 236 (260)
T d2frna1 224 RITKEYGYDVEKL 236 (260)
T ss_dssp HHHHHTTCEEEEE
T ss_pred HHHHHcCCceEEE
Confidence 8888877777544
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=91.75 E-value=0.074 Score=50.69 Aligned_cols=156 Identities=12% Similarity=0.190 Sum_probs=87.9
Q ss_pred chhhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc---c
Q 009719 348 EADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL---I 419 (527)
Q Consensus 348 ~~d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL---i 419 (527)
..||+.+-+.+-.|.+.. ....|+|+|||.|..+.++...|=+ +|+-+|-. .-+.++-+ -|+ +
T Consensus 92 RpeTE~lv~~~~~~~~~~-------~~~~vld~g~GsG~i~~~la~~~~~--~v~a~Dis~~Al~~A~~Na~~~~~~~~~ 162 (271)
T d1nv8a_ 92 RPETEELVELALELIRKY-------GIKTVADIGTGSGAIGVSVAKFSDA--IVFATDVSSKAVEIARKNAERHGVSDRF 162 (271)
T ss_dssp CTTHHHHHHHHHHHHHHH-------TCCEEEEESCTTSHHHHHHHHHSSC--EEEEEESCHHHHHHHHHHHHHTTCTTSE
T ss_pred hhhhhhhhhhhhhhhccc-------cccEEEEeeeeeehhhhhhhhcccc--eeeechhhhhHHHHHHHHHHHcCCCcee
Confidence 467888888887776532 2457999999999888777544422 22333332 33333332 244 2
Q ss_pred cccc-ccCCCCCCCCCccchhhhcCccccccC---------C----CCCCCCCcccccceeecccccCCcEEEEeCCHHH
Q 009719 420 GVYH-DWCEPFSTYPRTYDLIHVSGIESLIKN---------P----GSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEV 485 (527)
Q Consensus 420 G~~h-dwce~fstYPrtyDLiHa~~~fs~~~~---------~----~~~~~rC~~~~illEmDRILRP~G~~iird~~~~ 485 (527)
-+++ ||-++++-..-.||||=++==...-.. | .++.++..+-.-+ +-++|+|||++++-=..+.
T Consensus 163 ~i~~~~~~~~~~~~~~~fDlIVsNPPYI~~~~~l~~~~~~EP~~AL~gg~dGl~~~r~i--~~~~L~~~G~l~~Eig~~Q 240 (271)
T d1nv8a_ 163 FVRKGEFLEPFKEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREF--FGRYDTSGKIVLMEIGEDQ 240 (271)
T ss_dssp EEEESSTTGGGGGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHH--HHHCCCTTCEEEEECCTTC
T ss_pred EEeecccccccccccCcccEEEEcccccCcccccceeeeeccccccccccchHHHHHHH--HHHhcCCCCEEEEEECHHH
Confidence 3333 455554433357888766532211000 0 0112222211111 3578999999999744444
Q ss_pred HHHHHHHHhcCCceeEEecCCCCCCCCceEEEEEec
Q 009719 486 IDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 486 ~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
-++|+++++...| ..| -.+.+++++++|+
T Consensus 241 ~~~v~~l~~~~g~---~kD----l~g~~R~~~~~k~ 269 (271)
T d1nv8a_ 241 VEELKKIVSDTVF---LKD----SAGKYRFLLLNRR 269 (271)
T ss_dssp HHHHTTTSTTCEE---EEC----TTSSEEEEEEECC
T ss_pred HHHHHHHHHhCCE---Eec----cCCCcEEEEEEEc
Confidence 5677777777655 222 2357899999996
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=91.66 E-value=0.043 Score=49.67 Aligned_cols=117 Identities=15% Similarity=0.211 Sum_probs=69.6
Q ss_pred hhcCCCCC-CCCCccccCCCCCCCCCCCCCccchhhhccccccccC--CeeEEeeccCcChHHHHHHHHHcC----CCcE
Q 009719 109 RERHCPLP-DQTPLCLIPPPRGYKIPVPWPESLSKVASFGGSMLSE--NILTLSFAPRDSHKAQIQFALERG----IPAF 181 (527)
Q Consensus 109 reRhCp~~-~~~~~Clvp~P~gY~~P~~WP~Srd~vgsfga~Ll~r--~V~~msiAp~D~seaqvq~A~eRg----~pa~ 181 (527)
..+|=|.. +|-+..|.|.|.|.-+..- -. .|+++.+++++ +..++.+ |..+.|++.|.++. -...
T Consensus 4 ~~~H~pVll~evi~~l~~~~~~~~lD~t----~G-~Gghs~~il~~~~~~~vi~~---D~d~~~l~~a~~~l~~~~~r~~ 75 (192)
T d1m6ya2 4 SQRHIPVMVREVIEFLKPEDEKIILDCT----VG-EGGHSRAILEHCPGCRIIGI---DVDSEVLRIAEEKLKEFSDRVS 75 (192)
T ss_dssp CSSCCCTTHHHHHHHHCCCTTCEEEETT----CT-TSHHHHHHHHHCTTCEEEEE---ESCHHHHHHHHHHTGGGTTTEE
T ss_pred CCCCCchHHHHHHHhhCCCCCCEEEEec----CC-CcHHHHHHHhcCCCCeEEEe---echHHHHHHHHHhhcccccccc
Confidence 34566652 2334455565554332221 00 34444566665 3434444 88899999998863 2345
Q ss_pred EeeccccCC-----CCCCCcccEEEecCccc---------ccccChHHHHHHHhhcccCCcEEEEec
Q 009719 182 VAMLGTRRL-----PFPAFSFDIVHCSRCLI---------PFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 182 ~~v~dae~L-----PFpD~SFDlV~cs~~l~---------hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
+..+....+ .+..++||.|.....+. .+... ..+|.++.++|+|||.+++.+
T Consensus 76 ~~~~~f~~~~~~~~~~~~~~vdgIl~DlGvSs~Qld~~~r~~~~~-~~~L~~a~~~Lk~gG~l~ii~ 141 (192)
T d1m6ya2 76 LFKVSYREADFLLKTLGIEKVDGILMDLGVSTYQLKGENRELENL-KEFLKKAEDLLNPGGRIVVIS 141 (192)
T ss_dssp EEECCGGGHHHHHHHTTCSCEEEEEEECSCCHHHHHTSHTHHHHH-HHHHHHGGGGEEEEEEEEEEE
T ss_pred chhHHHhhHHHHHHHcCCCCcceeeeccchhHhhhhhhhccchhH-HHHHHHHHHhcCCCCeeeeec
Confidence 555543332 45678999998765441 11111 238999999999999998864
|
| >d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Probable methyltransferase Rv2118c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=91.37 E-value=0.052 Score=51.59 Aligned_cols=111 Identities=14% Similarity=0.133 Sum_probs=62.1
Q ss_pred cCCCCeeeEeecCCCccchhhhccC---C--CeeEEEecCCCCCCchhHhhh---c---cccccccccCCCC--CCCC-C
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTS---D--PVWVMNVVPARKSSTLSVIYD---R---GLIGVYHDWCEPF--STYP-R 434 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~---~--~VwvMnvvp~~~~ntl~vi~e---R---GLiG~~hdwce~f--stYP-r 434 (527)
++.|. +|||.|||.|+++.+|.. . .|+..-+- +..+..+-+ + +.....+..+.-+ ..+| .
T Consensus 94 i~PG~--~VLE~G~GsG~lt~~La~~vgp~G~V~~~d~~----~~~~~~Ar~n~~~~~~~~~~nv~~~~~d~~~~~~~~~ 167 (264)
T d1i9ga_ 94 IFPGA--RVLEAGAGSGALTLSLLRAVGPAGQVISYEQR----ADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDG 167 (264)
T ss_dssp CCTTC--EEEEECCTTSHHHHHHHHHHCTTSEEEEECSC----HHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTT
T ss_pred CCCCC--EEEecCcCCcHHHHHHHHhhCCCcEEEEecCC----HHHHHHHHHhhhhhccCCCceEEEEecccccccccCC
Confidence 56654 799999999999988843 2 35554221 133444332 1 1122222222211 2244 7
Q ss_pred ccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-CHH-HHHHHHHHHhcCCce
Q 009719 435 TYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPE-VIDKVSRIANTVRWT 499 (527)
Q Consensus 435 tyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~-~~~~i~~i~~~l~W~ 499 (527)
+||.|..+ +-..| .++-++-|+|||||.+++-. ..+ +..-++.+...-.|.
T Consensus 168 ~fDaV~ld-lp~P~-------------~~l~~~~~~LkpGG~lv~~~P~i~Qv~~~~~~l~~~~~f~ 220 (264)
T d1i9ga_ 168 SVDRAVLD-MLAPW-------------EVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWT 220 (264)
T ss_dssp CEEEEEEE-SSCGG-------------GGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBC
T ss_pred CcceEEEe-cCCHH-------------HHHHHHHhccCCCCEEEEEeCccChHHHHHHHHHHcCCee
Confidence 89987653 33433 37888999999999988753 443 333344443333463
|
| >d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Putative methyltransferase Atu0340 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=91.26 E-value=0.04 Score=53.69 Aligned_cols=89 Identities=12% Similarity=0.015 Sum_probs=58.8
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC---cEEeeccccC----CCCCCCcccEEEec---Cc---
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP---AFVAMLGTRR----LPFPAFSFDIVHCS---RC--- 205 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p---a~~~v~dae~----LPFpD~SFDlV~cs---~~--- 205 (527)
+|.|+-++...|..+..+ |.++..++.|++. |+. ..+.++|+.. +-...+.||+|++. +.
T Consensus 143 tG~~sl~aa~~GA~V~~V---D~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~~l~~~~~~~~~fD~IilDPP~f~~~~ 219 (309)
T d2igta1 143 TGVASLVAAAAGAEVTHV---DASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGT 219 (309)
T ss_dssp TCHHHHHHHHTTCEEEEE---CSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECT
T ss_pred CcHHHHHHHhCCCeEEEE---eChHHHHHHHHHhhhhhcccCCcEEEEeCCHHHhHHHHhhcCCCCCEEEECCCcccccc
Confidence 788888888888765555 8899999988764 442 4567777532 23346889999974 11
Q ss_pred -ccccc--cChHHHHHHHhhcccCCcEEEEec
Q 009719 206 -LIPFT--AYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 206 -l~hw~--d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
-..|. ++....+..+.++|+|||.+++++
T Consensus 220 ~~~~~~~~~~~~~l~~~~~~ll~~~g~~ll~t 251 (309)
T d2igta1 220 HGEVWQLFDHLPLMLDICREILSPKALGLVLT 251 (309)
T ss_dssp TCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred cchhHHHHHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 11221 222235667888999999766654
|
| >d1g60a_ c.66.1.11 (A:) Methyltransferase mboII {Moraxella bovis [TaxId: 476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Type II DNA methylase domain: Methyltransferase mboII species: Moraxella bovis [TaxId: 476]
Probab=91.04 E-value=0.12 Score=46.22 Aligned_cols=73 Identities=16% Similarity=0.150 Sum_probs=42.4
Q ss_pred CCCCcccEEEecC----ccccccc---------ChHHHHHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcce
Q 009719 192 FPAFSFDIVHCSR----CLIPFTA---------YNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCY 258 (527)
Q Consensus 192 FpD~SFDlV~cs~----~l~hw~d---------~~~~aL~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW 258 (527)
+||+|+|+|+++= .-..|.. .....+.|+.|||+|||.+++...+ .....+.......-|
T Consensus 19 lpd~sVdliitdPPY~~~~~~~d~~~~~~~y~~~~~~~~~e~~rvLk~~g~~~~~~~~-------~~~~~~~~~~~~~g~ 91 (256)
T d1g60a_ 19 VENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTP-------FNCAFICQYLVSKGM 91 (256)
T ss_dssp SCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECH-------HHHHHHHHHHHHTTC
T ss_pred CcCCCcCEEEECCCCCCCcCcCcCCCCHHHHHHHHHHHHHHhhhccccCcccccccCc-------hhhhhhhhhhhcccc
Confidence 5689999999871 1111211 1223788999999999999876531 112222222333345
Q ss_pred EEeeeecceEEEeCCCc
Q 009719 259 ELIAVDGNTVIWKKPVG 275 (527)
Q Consensus 259 ~~~~~~~~v~iwrKp~~ 275 (527)
... +.-||+|+..
T Consensus 92 ~~~----~~iiW~k~~~ 104 (256)
T d1g60a_ 92 IFQ----NWITWDKRDG 104 (256)
T ss_dssp EEE----EEEEECCCCS
T ss_pred eee----eeeEeeeccc
Confidence 443 3458988754
|
| >d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein FLJ20628 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.87 E-value=0.027 Score=55.05 Aligned_cols=112 Identities=11% Similarity=0.125 Sum_probs=56.3
Q ss_pred cCCCCeeeEeecCCCccchhhhccC---CC--eeEEEecCCCCCCchhHhhhc--------------cc---cc-ccccc
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTS---DP--VWVMNVVPARKSSTLSVIYDR--------------GL---IG-VYHDW 425 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~---~~--VwvMnvvp~~~~ntl~vi~eR--------------GL---iG-~~hdw 425 (527)
|..|. .|||+|||.|+++.+|.. .. |...-+-+ ..+.++-++ ++ +- ...|-
T Consensus 96 i~pG~--rVLE~GtGsG~lt~~LAr~vg~~G~V~t~E~~~----~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~di 169 (324)
T d2b25a1 96 INPGD--TVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRK----DHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI 169 (324)
T ss_dssp CCTTC--EEEEECCTTSHHHHHHHHHHCTTCEEEEEESSH----HHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT
T ss_pred CCCCC--EEEEecccccHHHHHHHHHhCCCcEEEEecCCH----HHHHHHHHHHHHhhhhhhhhhhhccccceeEEecch
Confidence 66665 699999999999988853 33 44432211 222222110 00 11 12233
Q ss_pred CCCCCCCC-CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-CHHHHHH-HHHH-HhcCCcee
Q 009719 426 CEPFSTYP-RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDK-VSRI-ANTVRWTA 500 (527)
Q Consensus 426 ce~fstYP-rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~-i~~i-~~~l~W~~ 500 (527)
++....++ ..||.|..+ +-..| .+|=|+-|+|||||.+++-- ..+-+.+ ++.| ...+.|..
T Consensus 170 ~~~~~~~~~~~fD~V~LD-~p~P~-------------~~l~~~~~~LKpGG~lv~~~P~i~Qv~~~~~~l~~~~~~f~~ 234 (324)
T d2b25a1 170 SGATEDIKSLTFDAVALD-MLNPH-------------VTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRTCELALSC 234 (324)
T ss_dssp TCCC-------EEEEEEC-SSSTT-------------TTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHHHTCCEEE
T ss_pred hhcccccCCCCcceEeec-CcCHH-------------HHHHHHHHhccCCCEEEEEeCCHHHHHHHHHHHHHcCCCcee
Confidence 33322223 567766542 11222 36778999999999998643 4433333 3333 12456753
|
| >d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: Catechol O-methyltransferase, COMT species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=90.69 E-value=0.16 Score=46.13 Aligned_cols=88 Identities=17% Similarity=0.219 Sum_probs=52.8
Q ss_pred CeeEEeeccCcChHHHHHHHHH----cCCC--cEEeeccccC-C-----CCCCCcccEEEecCcccccccCh--HHHHHH
Q 009719 154 NILTLSFAPRDSHKAQIQFALE----RGIP--AFVAMLGTRR-L-----PFPAFSFDIVHCSRCLIPFTAYN--ATYLIE 219 (527)
Q Consensus 154 ~V~~msiAp~D~seaqvq~A~e----Rg~p--a~~~v~dae~-L-----PFpD~SFDlV~cs~~l~hw~d~~--~~aL~E 219 (527)
+..+.++ |..+.+++.|++ .|+. +.+..+++.. | .+..+.||+|+... +.+.- ...+.|
T Consensus 81 ~g~v~si---d~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~e~l~~l~~~~~~~~~D~ifiD~----~~~~~~~~~~l~~ 153 (214)
T d2cl5a1 81 GARLLTM---EMNPDYAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVFLDH----WKDRYLPDTLLLE 153 (214)
T ss_dssp TCEEEEE---ESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGHHHHSCCCCEEEEEECS----CGGGHHHHHHHHH
T ss_pred ccEEEEE---eccHHHHHHHHHHHHHcCCCccceeeeccccccccchhhcccccccceeeecc----cccccccHHHHHH
Confidence 4444444 455666666653 2553 4566666533 3 35678999999763 33322 126888
Q ss_pred HhhcccCCcEEEEecCCCCCCCchhHHHHHH
Q 009719 220 VDRLLRPGGYLVISGPPVQWPKQDKEWADLQ 250 (527)
Q Consensus 220 i~RVLRPGG~lviS~pp~~~~~~~~~w~~i~ 250 (527)
..|+|||||.+++-. +.|++...-++.++
T Consensus 154 ~~~lLkpGGvIv~Dd--vl~~g~~~~~~~vr 182 (214)
T d2cl5a1 154 KCGLLRKGTVLLADN--VIVPGTPDFLAYVR 182 (214)
T ss_dssp HTTCEEEEEEEEESC--CCCCCCHHHHHHHH
T ss_pred HhCccCCCcEEEEeC--cCCCCChHHHHHHh
Confidence 999999999877643 45665544344343
|
| >d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Met-10+ protein-like domain: Hypothetical protein PH0793 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=90.55 E-value=0.3 Score=45.67 Aligned_cols=108 Identities=7% Similarity=0.169 Sum_probs=64.3
Q ss_pred hhccccccccCCe-eEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHH
Q 009719 143 VASFGGSMLSENI-LTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNAT 215 (527)
Q Consensus 143 vgsfga~Ll~r~V-~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~ 215 (527)
+|+|+-.++.++. .+..+ |.++..++.|++. ++. ..+..+|+..++- .+.||.|+... .+ ....
T Consensus 118 ~G~~~l~~a~~~~~~V~av---d~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~~-~~~~D~Ii~~~--p~---~~~~ 188 (260)
T d2frna1 118 IGHLSLPIAVYGKAKVIAI---EKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGY--VV---RTHE 188 (260)
T ss_dssp TTTTHHHHHHHTCCEEEEE---CCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECC--CS---SGGG
T ss_pred EcHHHHHHHHhCCcEEEEe---cCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhcc-CCCCCEEEECC--CC---chHH
Confidence 6777766665553 33333 6666777766543 554 4566788877754 57899998652 12 2223
Q ss_pred HHHHHhhcccCCcEEEEecC-CCCCCCchhHHHHHHHHHHhcceEE
Q 009719 216 YLIEVDRLLRPGGYLVISGP-PVQWPKQDKEWADLQAVARALCYEL 260 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p-p~~~~~~~~~w~~i~~l~~~mcW~~ 260 (527)
+|.+..++|||||.+.+..- +.... ....-+.++++++...++.
T Consensus 189 ~l~~a~~~l~~gG~lh~~~~~~~~~~-~~~~~e~~~~~~~~~g~~v 233 (260)
T d2frna1 189 FIPKALSIAKDGAIIHYHNTVPEKLM-PREPFETFKRITKEYGYDV 233 (260)
T ss_dssp GHHHHHHHEEEEEEEEEEEEEEGGGT-TTTTHHHHHHHHHHTTCEE
T ss_pred HHHHHHhhcCCCCEEEEEeccccccc-hhhHHHHHHHHHHHcCCce
Confidence 89999999999999976431 11100 0112244556666655544
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=89.80 E-value=0.044 Score=50.49 Aligned_cols=99 Identities=20% Similarity=0.264 Sum_probs=55.3
Q ss_pred HHHhhhccCCCCeeeEeecCCCccchhhhcc---CCCeeEEEecCCCCCCchhHhhhccccccccccCCCCCCCC--Ccc
Q 009719 362 KNTLNVKLGTPAIRNIMDMNAFFGGFAAALT---SDPVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFSTYP--RTY 436 (527)
Q Consensus 362 ~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~---~~~VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwce~fstYP--rty 436 (527)
.+.|. ++.+. +|||+|||+|-++|-|. ...|..+-+.+.-....-..+-+.|+--+.--....+..+| ..|
T Consensus 71 l~~L~--l~~g~--~VLeIGsGsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~~~~~pf 146 (215)
T d1jg1a_ 71 LEIAN--LKPGM--NILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPY 146 (215)
T ss_dssp HHHHT--CCTTC--CEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCE
T ss_pred HHhhc--cCccc--eEEEecCCCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCCcccCcc
Confidence 34444 66664 99999999999888763 43466655443211111122233344222222223334445 679
Q ss_pred chhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEE
Q 009719 437 DLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVV 479 (527)
Q Consensus 437 DLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~ii 479 (527)
|.|++....... ..-|++ -|+|||.+|+
T Consensus 147 D~Iiv~~a~~~i------------p~~l~~---qL~~gGrLv~ 174 (215)
T d1jg1a_ 147 DVIIVTAGAPKI------------PEPLIE---QLKIGGKLII 174 (215)
T ss_dssp EEEEECSBBSSC------------CHHHHH---TEEEEEEEEE
T ss_pred eeEEeecccccC------------CHHHHH---hcCCCCEEEE
Confidence 999986544422 233443 4899999986
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.07 E-value=0.044 Score=55.28 Aligned_cols=22 Identities=5% Similarity=0.018 Sum_probs=19.3
Q ss_pred ccccceeecccccCCcEEEEeC
Q 009719 460 LVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 460 ~~~illEmDRILRP~G~~iird 481 (527)
+...|-||=|+|||||.+|..+
T Consensus 312 l~~~L~ei~r~LKPGGrIVs~~ 333 (406)
T d1u2za_ 312 LNKKVEKILQTAKVGCKIISLK 333 (406)
T ss_dssp HHHHHHHHHTTCCTTCEEEESS
T ss_pred HHHHHHHHHHhcCCCcEEEEec
Confidence 4577899999999999999875
|
| >d1kyza2 c.66.1.12 (A:120-362) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=88.66 E-value=0.099 Score=48.23 Aligned_cols=95 Identities=14% Similarity=0.182 Sum_probs=58.4
Q ss_pred CCeeeEeecCCCccchhhhccCC----CeeEEEecCCCCCCchhHhhhccccccccccCCCCCCCCCccchhhhcCcccc
Q 009719 372 PAIRNIMDMNAFFGGFAAALTSD----PVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 372 ~~iRnvmDm~ag~GgFaAaL~~~----~VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
..++.|+|+|||.|.++.+|.++ .+.+.-.-++-+..+.. + .+-++-||.-++. |. .|..-..+++-.
T Consensus 80 ~~~~~vvDvGGG~G~~~~~l~~~~P~l~~~v~Dlp~vi~~~~~~---~-r~~~~~~d~~~~~---P~-ad~~~l~~vlh~ 151 (243)
T d1kyza2 80 EGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSY---P-GVEHVGGDMFVSI---PK-ADAVFMKWICHD 151 (243)
T ss_dssp SSCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECTTTTTTCCCC---T-TEEEEECCTTTCC---CC-CSCEECSSSSTT
T ss_pred cCCcEEEEecCCCcHHHHHHHHHCCCCeEEEcccHHhhhhcccC---C-ceEEecccccccC---CC-cceEEEEEEeec
Confidence 56999999999999999999543 35555543332221111 1 2456667776655 42 232222334444
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
|.+ + ....||-++=+.|+|||.++|-|
T Consensus 152 ~~d-----~--~~~~iL~~~~~al~pgg~~li~d 178 (243)
T d1kyza2 152 WSD-----E--HCLKFLKNCYEALPDNGKVIVAE 178 (243)
T ss_dssp SCH-----H--HHHHHHHHHHHHCCSSSCEEEEE
T ss_pred CCH-----H--HHHHHHHHHHHhcCCCceEEEEE
Confidence 421 1 12458888899999999998864
|
| >d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.19 E-value=0.085 Score=50.91 Aligned_cols=22 Identities=14% Similarity=0.151 Sum_probs=18.7
Q ss_pred ccccceeecccccCCcEEEEeC
Q 009719 460 LVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 460 ~~~illEmDRILRP~G~~iird 481 (527)
+...|.||=|.|+|||.+|...
T Consensus 245 ~~~~l~e~~r~LKpGg~iv~~~ 266 (328)
T d1nw3a_ 245 VDHQLKERFANMKEGGRIVSSK 266 (328)
T ss_dssp HHHHHHHHHTTCCTTCEEEESS
T ss_pred HHHHHHHHHHhCCCCcEEEEec
Confidence 3567899999999999999854
|
| >d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Escherichia coli [TaxId: 562]
Probab=87.17 E-value=0.15 Score=48.56 Aligned_cols=154 Identities=14% Similarity=0.209 Sum_probs=84.8
Q ss_pred hhhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccC-C-CeeEEEecCCCCC-CchhHh----hhccc--c
Q 009719 349 ADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTS-D-PVWVMNVVPARKS-STLSVI----YDRGL--I 419 (527)
Q Consensus 349 ~d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~-~-~VwvMnvvp~~~~-ntl~vi----~eRGL--i 419 (527)
.+|+.+-..+-.. +.....| |+|+|||.|.-|.+|.. . +.-| +-+|-. ..|.++ -.-|+ +
T Consensus 92 peTE~lv~~~l~~-------~~~~~~~-vlDlGtGSG~I~i~la~~~p~~~v---~avDis~~Al~~A~~Na~~~~~~~v 160 (274)
T d2b3ta1 92 PDTECLVEQALAR-------LPEQPCR-ILDLGTGTGAIALALASERPDCEI---IAVDRMPDAVSLAQRNAQHLAIKNI 160 (274)
T ss_dssp TTHHHHHHHHHHH-------SCSSCCE-EEEETCTTSHHHHHHHHHCTTSEE---EEECSSHHHHHHHHHHHHHHTCCSE
T ss_pred cchhhhhhhHhhh-------hcccccc-eeeeehhhhHHHHHHHhhCCccee---eeccchhHHHhHHHHHHHHhCcccc
Confidence 5677666544221 2333444 89999999999888833 2 3333 333322 222222 11222 2
Q ss_pred c-cccccCCCCCCCCCccchhhhcCccccccC----CC---CCCCCC--------c-ccccceeecccccCCcEEEEeCC
Q 009719 420 G-VYHDWCEPFSTYPRTYDLIHVSGIESLIKN----PG---SNKNSC--------S-LVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 420 G-~~hdwce~fstYPrtyDLiHa~~~fs~~~~----~~---~~~~rC--------~-~~~illEmDRILRP~G~~iird~ 482 (527)
- +..||-++++. ..||+|=++--+..-.+ +. -+...- . +..++-+.-+.|+|||++++-=.
T Consensus 161 ~~~~~d~~~~~~~--~~fDlIvsNPPYi~~~~~~~~~~v~~~eP~~AL~~g~dGl~~~~~i~~~a~~~L~~~G~l~lEig 238 (274)
T d2b3ta1 161 HILQSDWFSALAG--QQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG 238 (274)
T ss_dssp EEECCSTTGGGTT--CCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred eeeecccccccCC--CceeEEEecchhhhhhhhcccccccccchhhhcccccccchHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 2 44566665432 68999877643321100 00 000000 0 12477888999999999999633
Q ss_pred HHHHHHHHHHHhcCCce-eEE-ecCCCCCCCCceEEEEE
Q 009719 483 PEVIDKVSRIANTVRWT-AAV-HDKEPGSNGREKILVAT 519 (527)
Q Consensus 483 ~~~~~~i~~i~~~l~W~-~~~-~~~e~~~~~~ekiLi~~ 519 (527)
.+-.+.++++++...|. +.+ .| -.+.+++++++
T Consensus 239 ~~q~~~v~~~l~~~gf~~i~~~kD----l~g~~R~v~~r 273 (274)
T d2b3ta1 239 WQQGEAVRQAFILAGYHDVETCRD----YGDNERVTLGR 273 (274)
T ss_dssp SSCHHHHHHHHHHTTCTTCCEEEC----TTSSEEEEEEE
T ss_pred chHHHHHHHHHHHCCCCeEEEEEC----CCCCceEEEEe
Confidence 33346778888877785 333 23 23578898885
|
| >d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Escherichia coli [TaxId: 562]
Probab=87.01 E-value=0.6 Score=44.13 Aligned_cols=89 Identities=13% Similarity=0.144 Sum_probs=56.7
Q ss_pred CcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccc------------ccc-------Ch-----
Q 009719 163 RDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIP------------FTA-------YN----- 213 (527)
Q Consensus 163 ~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~h------------w~d-------~~----- 213 (527)
.|.++..++.|++. ++. ..+..+|... +++++.||+|+|.-=-++ +.. ++
T Consensus 138 vDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~-~~~~~~fDlIvsNPPYi~~~~~~~~~~v~~~eP~~AL~~g~dGl~~~ 216 (274)
T d2b3ta1 138 VDRMPDAVSLAQRNAQHLAIKNIHILQSDWFS-ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADI 216 (274)
T ss_dssp ECSSHHHHHHHHHHHHHHTCCSEEEECCSTTG-GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHH
T ss_pred ccchhHHHhHHHHHHHHhCcccceeeeccccc-ccCCCceeEEEecchhhhhhhhcccccccccchhhhcccccccchHH
Confidence 37778888887653 554 5666666432 567889999999721111 110 01
Q ss_pred HHHHHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceE
Q 009719 214 ATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYE 259 (527)
Q Consensus 214 ~~aL~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~ 259 (527)
...+.+..+.|+|||.+++-..+.. -+.+.++++...|.
T Consensus 217 ~~i~~~a~~~L~~~G~l~lEig~~q-------~~~v~~~l~~~gf~ 255 (274)
T d2b3ta1 217 VHIIEQSRNALVSGGFLLLEHGWQQ-------GEAVRQAFILAGYH 255 (274)
T ss_dssp HHHHHHHGGGEEEEEEEEEECCSSC-------HHHHHHHHHHTTCT
T ss_pred HHHHHHHHHhcCCCCEEEEEECchH-------HHHHHHHHHHCCCC
Confidence 1278899999999999999543211 24567777766664
|
| >d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Isoflavone O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=86.32 E-value=0.29 Score=45.27 Aligned_cols=53 Identities=15% Similarity=0.057 Sum_probs=40.6
Q ss_pred cEEeeccccCCCCCCCcccEEEecCcccccccChH-HHHHHHhhcccCC---cEEEEecC
Q 009719 180 AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA-TYLIEVDRLLRPG---GYLVISGP 235 (527)
Q Consensus 180 a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~-~aL~Ei~RVLRPG---G~lviS~p 235 (527)
+.+..+|... |.| .+|+++++++||+|.+... ..|+.+.+.|+|| |++++...
T Consensus 125 v~~~~gD~f~-~~p--~aD~~~l~~vLHdw~d~~~~~iL~~~~~al~pgg~~~~lli~e~ 181 (244)
T d1fp2a2 125 LTYVGGDMFT-SIP--NADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDM 181 (244)
T ss_dssp EEEEECCTTT-CCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred eEEEecCccc-CCC--CCcEEEEEeecccCChHHHHHHHHHHHHHcCcccCCcEEEEEEe
Confidence 4455566533 333 5799999999999988764 4899999999999 77887654
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=84.63 E-value=0.17 Score=48.71 Aligned_cols=104 Identities=11% Similarity=0.132 Sum_probs=54.2
Q ss_pred cCCCCeeeEeecCCCccchhhhccCCCe-eEEEecCCCCCCchhHh----hhccccccccccCCC-------CCCCCCcc
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKSSTLSVI----YDRGLIGVYHDWCEP-------FSTYPRTY 436 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~ntl~vi----~eRGLiG~~hdwce~-------fstYPrty 436 (527)
++.+ .+|||++||+|+|+.++..... -|.+|=-.. ..+..+ -.-|+-...+-.+.. +.--.++|
T Consensus 143 ~~~g--~~VLDl~~g~G~~si~~a~~ga~~V~~vD~s~--~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~f 218 (324)
T d2as0a2 143 VQPG--DRVLDVFTYTGGFAIHAAIAGADEVIGIDKSP--RAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKF 218 (324)
T ss_dssp CCTT--CEEEETTCTTTHHHHHHHHTTCSEEEEEESCH--HHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred cCCC--CeeecccCcccchhhhhhhcCCcEEEeecCCH--HHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCCC
Confidence 4444 3799999999999987755442 343332211 222222 222332222222211 11123678
Q ss_pred chhhhcCc-cccccCCCCCCC----CCcccccceeecccccCCcEEEEeC
Q 009719 437 DLIHVSGI-ESLIKNPGSNKN----SCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 437 DLiHa~~~-fs~~~~~~~~~~----rC~~~~illEmDRILRP~G~~iird 481 (527)
|+|=++-- |+.-+ ++ .-....++...=++|+|||.+++..
T Consensus 219 D~Vi~DpP~~~~~~-----~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s 263 (324)
T d2as0a2 219 DIVVLDPPAFVQHE-----KDLKAGLRAYFNVNFAGLNLVKDGGILVTCS 263 (324)
T ss_dssp EEEEECCCCSCSSG-----GGHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CchhcCCccccCCH-----HHHHHHHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 88766422 11100 00 0112357777789999999999974
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=83.60 E-value=0.34 Score=46.64 Aligned_cols=122 Identities=16% Similarity=0.186 Sum_probs=58.7
Q ss_pred eeEeecCCCccchhhhc-cCCCeeEEEecCCCCC-CchhHhhh-cccccccc--------ccCCCCCCCCCccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAAL-TSDPVWVMNVVPARKS-STLSVIYD-RGLIGVYH--------DWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL-~~~~VwvMnvvp~~~~-ntl~vi~e-RGLiG~~h--------dwce~fstYPrtyDLiHa~~ 443 (527)
+.|||+.||+|||+-++ ....-.|.+|--.... ....--++ .||=..-| +|.+.+---.+.||+|=++-
T Consensus 146 ~~VLdlf~~~G~~sl~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~~l~~~~~~~~~fD~Ii~DP 225 (317)
T d2b78a2 146 KTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDP 225 (317)
T ss_dssp CEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CceeecCCCCcHHHHHHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHHHHHHHHhhcCCCCEEEEcC
Confidence 57999999999997554 3333355555322211 11111111 23311111 11111111236788887641
Q ss_pred -ccccccCCCCCCCCCc----ccccceeecccccCCcEEEEeC------CHHHHHHHHHHHhcCCceeE
Q 009719 444 -IESLIKNPGSNKNSCS----LVDLMVEMDRMLRPEGTVVVRD------SPEVIDKVSRIANTVRWTAA 501 (527)
Q Consensus 444 -~fs~~~~~~~~~~rC~----~~~illEmDRILRP~G~~iird------~~~~~~~i~~i~~~l~W~~~ 501 (527)
.|+.-+ +..=. ...++-..=++|+|||.+++.. ..+....|++.+..-.+...
T Consensus 226 P~f~~~~-----~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~scs~~~~~~~f~~~v~~a~~~~~~~~~ 289 (317)
T d2b78a2 226 PSFARNK-----KEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHTYL 289 (317)
T ss_dssp CCC----------CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCEEE
T ss_pred hhhccch-----hHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCCccCCHHHHHHHHHHHHHHcCCeEE
Confidence 122100 11111 1245555557899999999974 22344455555555455544
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=83.23 E-value=0.16 Score=43.31 Aligned_cols=88 Identities=10% Similarity=0.111 Sum_probs=55.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccC-CCCCCCcccEEEecCcccccccCh-H
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAYN-A 214 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~~-~ 214 (527)
+|++|-..+.||+. .+...|.+...++.+++. ++. ..+..+|+.. |+...+.||+|++. -++.... .
T Consensus 25 tG~~~iea~~rga~--~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~~l~~~~~~fDiIf~D---PPy~~~~~~ 99 (152)
T d2esra1 25 SGGLAIEAVSRGMS--AAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLD---PPYAKETIV 99 (152)
T ss_dssp TCHHHHHHHHTTCC--EEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEEC---CSSHHHHHH
T ss_pred cCHHHHHHHHhCcc--eeeeehhchhhhhhhhhhhhhcccccchhhhcccccccccccccccceeEec---hhhccchHH
Confidence 67777677788874 222336666666666543 443 4566677655 56778999999975 2332221 1
Q ss_pred HHHHHH--hhcccCCcEEEEecC
Q 009719 215 TYLIEV--DRLLRPGGYLVISGP 235 (527)
Q Consensus 215 ~aL~Ei--~RVLRPGG~lviS~p 235 (527)
..|..+ .+.|+|||.+++..+
T Consensus 100 ~~l~~i~~~~~L~~~g~iiiE~~ 122 (152)
T d2esra1 100 ATIEALAAKNLLSEQVMVVCETD 122 (152)
T ss_dssp HHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHHHHHHHCCCcCCCeEEEEEeC
Confidence 244433 478999999999665
|
| >d1kyza2 c.66.1.12 (A:120-362) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=83.13 E-value=0.51 Score=43.17 Aligned_cols=53 Identities=11% Similarity=0.046 Sum_probs=38.6
Q ss_pred cEEeeccccCCCCCCCcccEEEecCcccccccChH-HHHHHHhhcccCCcEEEEecC
Q 009719 180 AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA-TYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 180 a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~-~aL~Ei~RVLRPGG~lviS~p 235 (527)
..+..+|... |.|. -|.+...+++++|.+... .+|+++.+.|+|||++++...
T Consensus 126 ~~~~~~d~~~-~~P~--ad~~~l~~vlh~~~d~~~~~iL~~~~~al~pgg~~li~d~ 179 (243)
T d1kyza2 126 VEHVGGDMFV-SIPK--ADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAEC 179 (243)
T ss_dssp EEEEECCTTT-CCCC--CSCEECSSSSTTSCHHHHHHHHHHHHHHCCSSSCEEEEEC
T ss_pred eEEecccccc-cCCC--cceEEEEEEeecCCHHHHHHHHHHHHHhcCCCceEEEEEE
Confidence 3444455321 3443 467788899999987653 599999999999999999764
|
| >d1booa_ c.66.1.11 (A:) m.PvuII N4 cytosine-specific DNA methyltransferase {Proteus vulgaris [TaxId: 585]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Type II DNA methylase domain: m.PvuII N4 cytosine-specific DNA methyltransferase species: Proteus vulgaris [TaxId: 585]
Probab=82.46 E-value=0.14 Score=47.15 Aligned_cols=57 Identities=19% Similarity=0.215 Sum_probs=35.8
Q ss_pred EEeeccccC-C-CCCCCcccEEEecC---ccccc----------ccChHHHHHHHhhcccCCcEEEEecCCC
Q 009719 181 FVAMLGTRR-L-PFPAFSFDIVHCSR---CLIPF----------TAYNATYLIEVDRLLRPGGYLVISGPPV 237 (527)
Q Consensus 181 ~~~v~dae~-L-PFpD~SFDlV~cs~---~l~hw----------~d~~~~aL~Ei~RVLRPGG~lviS~pp~ 237 (527)
.+..+|+.. | -++++|+|+|+.+= ....+ .+.....+.|+.|||||+|.+++.....
T Consensus 14 ~l~~GD~le~l~~l~~~sVdli~tDPPY~~~~~~~~~~~~~~~y~~~~~~~l~~~~rvLk~~G~i~i~~~~~ 85 (320)
T d1booa_ 14 SMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 85 (320)
T ss_dssp EEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred EEEehhHHHHHhhCccCCCCEEEECCCCcCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCcccCcccccccch
Confidence 344555321 2 15689999999771 10011 1112237999999999999999976643
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=82.42 E-value=0.42 Score=42.72 Aligned_cols=114 Identities=11% Similarity=0.032 Sum_probs=59.6
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cccccccccCCCCCCCCCccchhhhcCcccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIK 449 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~ 449 (527)
.+|||+|||+|+++.++...+-- .|+-++-. ..+..+.+. |+-. .-.+.-...++..||+|=++--|...
T Consensus 48 ~~vLDlg~GtG~l~i~a~~~g~~--~v~~vdi~~~~~~~a~~N~~~~~~~~--~~~~~d~~~~~~~fD~Vi~nPP~~~~- 122 (201)
T d1wy7a1 48 KVVADLGAGTGVLSYGALLLGAK--EVICVEVDKEAVDVLIENLGEFKGKF--KVFIGDVSEFNSRVDIVIMNPPFGSQ- 122 (201)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHTGGGTTSE--EEEESCGGGCCCCCSEEEECCCCSSS-
T ss_pred CEEEECcCcchHHHHHHHHcCCC--EEEEEcCcHHHHHHHHHHHHHcCCCc--eEEECchhhhCCcCcEEEEcCccccc-
Confidence 37999999999998655444421 12222222 344444332 2211 11122233457789988665444321
Q ss_pred CCCCCCCCCcccccceeecccccCCcEEE--EeCCHHHHHHHHHHHhcCCceeEE
Q 009719 450 NPGSNKNSCSLVDLMVEMDRMLRPEGTVV--VRDSPEVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 450 ~~~~~~~rC~~~~illEmDRILRP~G~~i--ird~~~~~~~i~~i~~~l~W~~~~ 502 (527)
.....+..+ .+.+.+++.+. -....+..+.++++++...|.+..
T Consensus 123 -----~~~~d~~~l----~~~~~~~~~v~~ih~~~~~~~~~i~~~~~~~g~~i~~ 168 (201)
T d1wy7a1 123 -----RKHADRPFL----LKAFEISDVVYSIHLAKPEVRRFIEKFSWEHGFVVTH 168 (201)
T ss_dssp -----STTTTHHHH----HHHHHHCSEEEEEEECCHHHHHHHHHHHHHTTEEEEE
T ss_pred -----cccccHHHH----HHHHhhcccchhcccchHHHHHHHHHHHhhcCceEEE
Confidence 122333322 23344555443 334556667788888888887654
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=80.56 E-value=0.18 Score=45.73 Aligned_cols=67 Identities=13% Similarity=-0.000 Sum_probs=35.7
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccccccccccCCCCCCCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGLiG~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
++|+|+|||.|.++-++...+.- +|+-+|.. .++.++-+. + .-..--|.-+...|..||+|=++--|
T Consensus 50 k~VLDlGcGtG~l~i~a~~~ga~--~V~~vDid~~a~~~ar~N-~-~~~~~~~~D~~~l~~~fD~Vi~NPPf 117 (197)
T d1ne2a_ 50 RSVIDAGTGNGILACGSYLLGAE--SVTAFDIDPDAIETAKRN-C-GGVNFMVADVSEISGKYDTWIMNPPF 117 (197)
T ss_dssp SEEEEETCTTCHHHHHHHHTTBS--EEEEEESCHHHHHHHHHH-C-TTSEEEECCGGGCCCCEEEEEECCCC
T ss_pred CEEEEeCCCCcHHHHHHHHcCCC--cccccccCHHHHHHHHHc-c-ccccEEEEehhhcCCcceEEEeCccc
Confidence 58999999999886444433321 22333332 455544332 1 11111122334467889988766444
|
| >d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Putative spermidine synthetase PF0127 (SpeE) species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=80.48 E-value=0.87 Score=42.74 Aligned_cols=98 Identities=13% Similarity=0.136 Sum_probs=56.2
Q ss_pred cCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC------------------------CchhHhhhccccccccc
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS------------------------STLSVIYDRGLIGVYHD 424 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~------------------------ntl~vi~eRGLiG~~hd 424 (527)
....+-++||-+|+|.|+-+..+.+.+.--+-+|=.|.. ..+.++.+.|.--+ .
T Consensus 68 ~~~~~p~~vLiiG~G~G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~~~l-~- 145 (276)
T d1mjfa_ 68 LAHPKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFI-K- 145 (276)
T ss_dssp HHSSCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHH-H-
T ss_pred hcCCCCceEEEecCCchHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHHHHH-h-
Confidence 445678999999999999998887777533333322211 11222322232111 1
Q ss_pred cCCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 425 WCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 425 wce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
+ .++||+|-.+ ++.... ....---...+-.+-|.|+|+|.++..
T Consensus 146 ------~-~~~yDvIi~D-~~~~~~----~~~~L~t~eF~~~~~~~L~~~Gv~v~q 189 (276)
T d1mjfa_ 146 ------N-NRGFDVIIAD-STDPVG----PAKVLFSEEFYRYVYDALNNPGIYVTQ 189 (276)
T ss_dssp ------H-CCCEEEEEEE-CCCCC---------TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred ------c-cCCCCEEEEe-CCCCCC----CcccccCHHHHHhhHhhcCCCceEEEe
Confidence 1 3679999765 333221 111111135567789999999999985
|