Citrus Sinensis ID: 009774

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520------
Protein Sequence
MATLAVNGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI
Secondary Structure (PSIPRED)
ccccccccccccccccccHHHHccccHHHHHHHHHHHHHHHHHcccccccccccEEEEccccccccccEEEEEcccccccccccccEEEEEccccccccccccccccccccccccHHHHHHHHHcccccEEEEcccHHHHHHHHHcccccEEEEccHHHHHHcccccccccEEEcEEEcccccHHHHHHHHHHHHHcccccEEEEccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHcccEEEEEcccHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHcccccccEEEccccHHHHHHHHHccccEEEEEcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEccHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHcccEEcccccEEEEEcccccccccEEEEEccccccccccccccEEEEEccccEEccccccccccccccccccHHHHHHHHHHccccEEEEcccHHHHHHHHccccccEEEEcHHHHHHHHcccccccEEEEEEEcccHHHHHHHHHHHHHHHHcccccEEEEEcccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccEEEEEEcccHHHHHHHHccccccccHHHHcccccccccccccHHHHHHHHHHcccccHHHEEEEccHHHHHHHHHHccccEEEEEEcccccccccccccEEccHccc
Coil and Loop (DISEMBL)
matlavnggggaaaATHTQAYLEGRAVKETRVLISELCRHFYtlgwvsgtggsitikvhddsipkpqqlilmspsgvqkermepedmyvlsgngttlsspspkpyphkppkcsdcaplfMKAYEkrdagaviHSHGIESCLVTMINPMSKEFRITHMEMIKGikghgyydeLVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQlgldwstpnhgptrnfklglgsngnvntSAKAVtegsdygsglfprcivldiegtttpisfVSEVLfpyardnvgkhlsvtydtaetqDDIKLLRSQVEDDlkqgvagavpippgdagkEEVIAALVANVDAMIKADRKITALKQLQGHiwrtgfesnelegevfddvPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDtavgnkretpsYVEITnslgvdkpseiLFVTDVYQEATAAKAAGLEVVISirpgngplpenhgfktinsfaei
Flexible Loop (DISEMBL)
matlavnggggaaaathtQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGavpippgdaGKEEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEItnslgvdkpseILFVTDVYQEATAAKAAGLEVVISIRpgngplpenhgfktinsfaei
Low Complexity Region (SEG)
MATLAVNggggaaaaTHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLsspspkpyphkppkCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI
Disordered region (IsUnstruct)
*************AATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHD*****************************************************DCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLGLG**********AVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQV***LKQGVAGAVPIP**DAGKEEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIR*********************
Disordered Region (DISOPRED)
***************************KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLS**************SDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWST*********************************SGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI
Disordered Region (DISEMBL)
***************THTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNG****************KCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI
Disordered Region (DISPRO)
*ATLAVNGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRN*K************************GLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATLAVNGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	526	2.2.26 [Sep-21-2011]
B9SQI7	527	Probable bifunctional met	N/A	no	0.980	0.979	0.825	0.0
B9N1F9	504	Probable bifunctional met	yes	no	0.956	0.998	0.819	0.0
E0CSI1	517	Probable bifunctional met	yes	no	0.982	1.0	0.787	0.0
E0CTF3	531	Probable bifunctional met	no	no	0.988	0.979	0.737	0.0
Q9FN41	507	Probable bifunctional met	yes	no	0.941	0.976	0.759	0.0
Q2R483	518	Probable bifunctional met	yes	no	0.958	0.972	0.720	0.0
B8BKI7	518	Probable bifunctional met	N/A	no	0.958	0.972	0.716	0.0
C6JS30	517	Probable bifunctional met	N/A	no	0.965	0.982	0.689	0.0
B4G0F3	517	Probable bifunctional met	N/A	no	0.965	0.982	0.684	0.0
A9RBS1	505	Probable bifunctional met	N/A	no	0.922	0.960	0.648	0.0

>sp|B9SQI7|MTBC_RICCO Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Ricinus communis GN=RCOM_0591060 PE=3 SV=1

 Score =  867 bits (2241), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/520 (82%), Positives = 467/520 (89%), Gaps = 4/520 (0%)

Query: 7   NGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKP 66
           NGG   A    +QAYLE +AVKETRVLIS+LCR FY LGWVSGTGGSITIKVHDDSIPKP
Sbjct: 12  NGGVKVA----SQAYLESKAVKETRVLISDLCRQFYNLGWVSGTGGSITIKVHDDSIPKP 67

Query: 67  QQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR 126
            QLILMSPSGVQKERMEPEDMYVL+ NG+ LSSPSPKPYPHKPPKCSDC PLF+KAYE  
Sbjct: 68  NQLILMSPSGVQKERMEPEDMYVLAANGSILSSPSPKPYPHKPPKCSDCGPLFLKAYEMC 127

Query: 127 DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENEL 186
           +AGAVIHSHG+ESCLVTMINP+SKEF+ITHMEMIKGIKGHGYYDELVVPIIENTAYENEL
Sbjct: 128 NAGAVIHSHGMESCLVTMINPLSKEFKITHMEMIKGIKGHGYYDELVVPIIENTAYENEL 187

Query: 187 TDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWST 246
           TDSLAKAI+ YPK TAVLVRNHGIY+WGDSWI+AKTQAECYHYLFDAAIKLHQLGLDWST
Sbjct: 188 TDSLAKAIEEYPKTTAVLVRNHGIYIWGDSWISAKTQAECYHYLFDAAIKLHQLGLDWST 247

Query: 247 PNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLF 306
           PNHG  +N K  +GSN ++NTS KA  + S++G    P CIVLDIEGTTTPI+FV++VLF
Sbjct: 248 PNHGLIQNVKALIGSNRDINTSVKAGLKDSNHGMQSLPGCIVLDIEGTTTPITFVADVLF 307

Query: 307 PYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALV 366
           PYARDNVG+HL  TY+TAETQDDIKLLR+QVEDDL +GV  AV IPP DAGKEEVIAALV
Sbjct: 308 PYARDNVGRHLYATYETAETQDDIKLLRTQVEDDLARGVNEAVSIPPDDAGKEEVIAALV 367

Query: 367 ANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSS 426
           ANV+AMIKADRKITALKQLQGHIWRTGF++NELEG V+DDVPEALEKWH+LG KVYIYSS
Sbjct: 368 ANVEAMIKADRKITALKQLQGHIWRTGFQNNELEGVVYDDVPEALEKWHALGIKVYIYSS 427

Query: 427 GSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDV 486
           GSRLAQRLIFG +NYGDLRKYLSGFFDT VGNKRET SY+EI+ S+GVD+PSEILFVTDV
Sbjct: 428 GSRLAQRLIFGKTNYGDLRKYLSGFFDTTVGNKRETRSYIEISESVGVDRPSEILFVTDV 487

Query: 487 YQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526
            QEA AAK AGLE VISIR GN PLPENHGFKTINS +EI
Sbjct: 488 VQEAVAAKGAGLEAVISIRQGNAPLPENHGFKTINSLSEI 527

Ricinus communis (taxid: 3988)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 7EC: 7

>sp|B9N1F9|MTBC_POPTR Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Populus trichocarpa GN=POPTRDRAFT_827604 PE=3 SV=1

 Score =  858 bits (2218), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/515 (81%), Positives = 464/515 (90%), Gaps = 12/515 (2%)

Query: 12  AAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLIL 71
           AAA   +QAYLE +AVK+TRVLI++LC+ FYTLGWVSGTGGSITIK HDDSIPK QQLIL
Sbjct: 2   AAAKVASQAYLESKAVKDTRVLIADLCKQFYTLGWVSGTGGSITIKAHDDSIPKRQQLIL 61

Query: 72  MSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAV 131
           MSPSGVQKERMEPEDMYVL+ NG+ LSSPSPKPYP+KPPKCSDCAPLF+KAY+ R+AGAV
Sbjct: 62  MSPSGVQKERMEPEDMYVLATNGSILSSPSPKPYPYKPPKCSDCAPLFLKAYDMRNAGAV 121

Query: 132 IHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLA 191
           IHSHG+ESCLVTMINP+SKEFRITHMEMIKGI+GHGYYDELVVPIIENTAYENELTDSLA
Sbjct: 122 IHSHGMESCLVTMINPLSKEFRITHMEMIKGIQGHGYYDELVVPIIENTAYENELTDSLA 181

Query: 192 KAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGP 251
           KAI+AYPK TAVLVRNHGIY+WGDSWI+AKTQAECYHYLFDAAIKLHQ+GLDWSTPNHGP
Sbjct: 182 KAIEAYPKTTAVLVRNHGIYIWGDSWISAKTQAECYHYLFDAAIKLHQIGLDWSTPNHGP 241

Query: 252 TRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARD 311
            +N K+  G N + N                 PRCIVLDIEGTTTPI+FV++VLFPYARD
Sbjct: 242 IQNVKVKAGMNNSNNRIEP------------LPRCIVLDIEGTTTPITFVADVLFPYARD 289

Query: 312 NVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALVANVDA 371
           NVG+HLS TYDTAET+DDI LLR+QVEDDL QGV GA+PIP  DAGKEEVIAALVANV+A
Sbjct: 290 NVGRHLSATYDTAETKDDINLLRTQVEDDLAQGVDGAIPIPTDDAGKEEVIAALVANVEA 349

Query: 372 MIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLA 431
           MIKADRKITALKQLQGHIWRTG+E+NELEG V+DDVPEALEKWH+LG KVYIYSSGSRLA
Sbjct: 350 MIKADRKITALKQLQGHIWRTGYENNELEGVVYDDVPEALEKWHALGIKVYIYSSGSRLA 409

Query: 432 QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEAT 491
           QRLIFG +NYGDLRKYLSGFFDT VGNK+ET SY+EI+ SLGVDKPS+ILFVTDV+QEA 
Sbjct: 410 QRLIFGKTNYGDLRKYLSGFFDTTVGNKKETRSYIEISESLGVDKPSDILFVTDVFQEAF 469

Query: 492 AAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526
           AAK AGL+V+ISIRPGN PLPENHGFKTI SFAEI
Sbjct: 470 AAKGAGLDVMISIRPGNAPLPENHGFKTITSFAEI 504

Populus trichocarpa (taxid: 3694)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 7

>sp|E0CSI1|MTBC1_VITVI Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 OS=Vitis vinifera GN=VIT_19s0014g02480 PE=2 SV=2

 Score =  834 bits (2155), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/526 (78%), Positives = 466/526 (88%), Gaps = 9/526 (1%)

Query: 1   MATLAVNGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHD 60
           MA  A+NG   AA    +QAYLE   V +TR L+S+LCRHFY LGWVSGTGGSITIKVHD
Sbjct: 1   MAAAALNGLKMAAT---SQAYLESMPVNDTRKLLSDLCRHFYGLGWVSGTGGSITIKVHD 57

Query: 61  DSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFM 120
           +SIPKPQQLI+MSPSGVQKERM PEDMYVLS +G  LSSPSPKPYP+KPPKCSDCAPLFM
Sbjct: 58  ESIPKPQQLIVMSPSGVQKERMVPEDMYVLSPSGCFLSSPSPKPYPNKPPKCSDCAPLFM 117

Query: 121 KAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT 180
           KAY  R+AGAVIHSHG+ESC+VTMI+P+SKEFRITHMEMIKGI+GHGYYDELVVPIIENT
Sbjct: 118 KAYLMRNAGAVIHSHGMESCIVTMIDPLSKEFRITHMEMIKGIQGHGYYDELVVPIIENT 177

Query: 181 AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL 240
           A+E ELTD+LA+AI+AYPK TAVLVRNHGIY+WGDSWI+AKTQAECYHYLFDAAIKL+QL
Sbjct: 178 AHERELTDALAEAIEAYPKTTAVLVRNHGIYIWGDSWIHAKTQAECYHYLFDAAIKLYQL 237

Query: 241 GLDWSTPNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISF 300
           GLDWSTP+HGP + +       G  N S KA T  S++ +    RCIVLDIEGTTTPISF
Sbjct: 238 GLDWSTPDHGPIKKY------GGKTNMSVKAGTVNSNHETEPSRRCIVLDIEGTTTPISF 291

Query: 301 VSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE 360
           V++VLFP+AR+NV +HL+ TY+T ETQDDIKLLR+QV+ DL+QG+ GAVPIPP DAGKEE
Sbjct: 292 VTDVLFPFARNNVSRHLAATYETDETQDDIKLLRTQVQSDLEQGIVGAVPIPPDDAGKEE 351

Query: 361 VIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTK 420
           VIAALVANV+AMIKADRKITALKQLQGHIWRTGF++NELEG VF+DVPEAL+KWH+ G K
Sbjct: 352 VIAALVANVEAMIKADRKITALKQLQGHIWRTGFQNNELEGVVFEDVPEALQKWHASGIK 411

Query: 421 VYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 480
           VYIYSSGSRLAQRL+FG +NYGDLRKYL GFFDT VGNKRET SYVEIT S+GVDKPSEI
Sbjct: 412 VYIYSSGSRLAQRLLFGYTNYGDLRKYLCGFFDTTVGNKRETKSYVEITESVGVDKPSEI 471

Query: 481 LFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526
           LFVTDVYQEA AAKAAGLEV+ISIRPGNGPLP+NHGFKTI SF++I
Sbjct: 472 LFVTDVYQEAVAAKAAGLEVIISIRPGNGPLPDNHGFKTITSFSDI 517

Vitis vinifera (taxid: 29760)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 7

>sp|E0CTF3|MTBC2_VITVI Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 2 OS=Vitis vinifera GN=VIT_12s0028g03470 PE=2 SV=2

 Score =  806 bits (2082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/521 (73%), Positives = 434/521 (83%), Gaps = 1/521 (0%)

Query: 6   VNGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPK 65
           VNG      A+    Y+E R V+E RVL SELCRH YTLGW SGTGGSITIKVHDDSIPK
Sbjct: 12  VNGNEVGTTASFA-GYMETRGVREARVLASELCRHMYTLGWFSGTGGSITIKVHDDSIPK 70

Query: 66  PQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEK 125
           P+QL+++SPSGVQKERM PEDMYVLS +G  LS+P  KPYPHKPPKC+DC PLFMK YE 
Sbjct: 71  PRQLVVISPSGVQKERMVPEDMYVLSSDGFILSTPPLKPYPHKPPKCTDCTPLFMKVYEM 130

Query: 126 RDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENE 185
           RDAGAVIHSHG+ESC+VTMI P SKEFRITHMEMIKGIKGHGY+DELVVPIIENTA+E E
Sbjct: 131 RDAGAVIHSHGMESCIVTMILPFSKEFRITHMEMIKGIKGHGYHDELVVPIIENTAHEAE 190

Query: 186 LTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWS 245
           L +SL +AI AYPK TAVLVRNHG+YVWGDSWI+AKTQAECYHYLFDAAIKLHQLGLDWS
Sbjct: 191 LVESLTEAITAYPKTTAVLVRNHGVYVWGDSWISAKTQAECYHYLFDAAIKLHQLGLDWS 250

Query: 246 TPNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVL 305
           TP HGP R+     G NG ++   K      D       RCI+LDIEGTTTPISFV++VL
Sbjct: 251 TPTHGPIRSINGIWGCNGTMSRGLKVGGLSLDDMIEPSQRCILLDIEGTTTPISFVTDVL 310

Query: 306 FPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAAL 365
           FPYA  NVGKHL+ T+D+ ETQDDI LLRSQ++ DL+ GV GAVPIPP   GKE VIA+ 
Sbjct: 311 FPYAHANVGKHLAATFDSEETQDDINLLRSQIQHDLEHGVVGAVPIPPDYVGKELVIASF 370

Query: 366 VANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYS 425
           VANV+AMI+ADR ITALKQLQGHIW+TGF+SNEL G VFDDVPEALE+WH+ G KVYIYS
Sbjct: 371 VANVEAMIRADRNITALKQLQGHIWKTGFQSNELVGVVFDDVPEALERWHASGIKVYIYS 430

Query: 426 SGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTD 485
           SGSR AQ+LIF NSNYGDLRKY  GFFDT +GNK+ET SY EI  ++G+D+PS++LFVTD
Sbjct: 431 SGSREAQQLIFSNSNYGDLRKYFCGFFDTTMGNKKETHSYFEILRTVGIDRPSDMLFVTD 490

Query: 486 VYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526
           V+QEA AA+AAGLEVVISIRPGNGPLPENHGF+TI +F EI
Sbjct: 491 VFQEAVAARAAGLEVVISIRPGNGPLPENHGFRTIETFLEI 531

Vitis vinifera (taxid: 29760)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 7

>sp|Q9FN41|MTBC_ARATH Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Arabidopsis thaliana GN=At5g53850 PE=2 SV=1

 Score =  798 bits (2060), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/508 (75%), Positives = 449/508 (88%), Gaps = 13/508 (2%)

Query: 19  QAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQ 78
           QAYLEG+ VKET  L++ELCRHFYT GWVSGTGGSIT+KVHD SIPKP+QLI+MSPSGVQ
Sbjct: 13  QAYLEGKEVKETSSLVTELCRHFYTQGWVSGTGGSITMKVHDASIPKPEQLIVMSPSGVQ 72

Query: 79  KERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIE 138
           KERM+PEDMY+LS NG+ +S+PSPKPYP+KPPKC+DCAPLFMKAYE R+AGAVIHSHG+E
Sbjct: 73  KERMQPEDMYILSANGSIISTPSPKPYPNKPPKCTDCAPLFMKAYEMRNAGAVIHSHGME 132

Query: 139 SCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYP 198
           SCLVTM+NP +KEFRITHMEMIKGI+GHGYYDELVVPIIENTAYENELTDSL KAI+AYP
Sbjct: 133 SCLVTMLNPQAKEFRITHMEMIKGIQGHGYYDELVVPIIENTAYENELTDSLTKAIEAYP 192

Query: 199 KATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLG 258
           KATAVLVRNHG+Y+WGDSWI+AKTQAECYHYLFDAAIKLHQLGLD +TP+HGP R     
Sbjct: 193 KATAVLVRNHGVYIWGDSWIHAKTQAECYHYLFDAAIKLHQLGLDAATPDHGPIRR---- 248

Query: 259 LGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLS 318
                 +++  K     S Y      R IVLDIEGTTTPI+FV++VLFPYAR+NVGKHL+
Sbjct: 249 -----TIHSQIK----DSQYEREWPRRWIVLDIEGTTTPITFVTDVLFPYARENVGKHLN 299

Query: 319 VTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALVANVDAMIKADRK 378
           +TY TAETQ+DIKLLR+QVE+DL++GV GAVPIP  D GKE+VIAA+V+NV+AMI+ADRK
Sbjct: 300 LTYHTAETQEDIKLLRAQVEEDLREGVTGAVPIPHADEGKEKVIAAMVSNVEAMIRADRK 359

Query: 379 ITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN 438
           ITALK+LQGHIWRTGFE +EL+  VF+DV +ALEKWHS G KVYIYSSGSRLAQ+L+FGN
Sbjct: 360 ITALKELQGHIWRTGFECDELKAIVFEDVADALEKWHSSGIKVYIYSSGSRLAQKLLFGN 419

Query: 439 SNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGL 498
           ++YGDLRKY+SGFFDT +GNK+E+ SY EI  +LGVD P+EI+FVTDVYQEA AAKAAGL
Sbjct: 420 TDYGDLRKYISGFFDTTIGNKKESRSYKEIKETLGVDDPAEIMFVTDVYQEAVAAKAAGL 479

Query: 499 EVVISIRPGNGPLPENHGFKTINSFAEI 526
           E +ISIRPGN PLPENHGFKT+ SF++I
Sbjct: 480 EAIISIRPGNAPLPENHGFKTVTSFSQI 507

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 7

>sp|Q2R483|MTBC_ORYSJ Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Oryza sativa subsp. japonica GN=Os11g0484000 PE=2 SV=1

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/511 (72%), Positives = 429/511 (83%), Gaps = 7/511 (1%)

Query: 16  THTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPS 75
           T ++AYLEG AV+E R L++ELCRHFY  GWV+GTGGSIT+K +D ++P   QLI+MSPS
Sbjct: 15  TESEAYLEGEAVREARELVAELCRHFYGQGWVTGTGGSITVKANDPALPLADQLIVMSPS 74

Query: 76  GVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSH 135
           GVQKERM  EDMYVLS +G  LSSP  KP+P+KPPKC+DCAPLFMKAY  R AGAVIHSH
Sbjct: 75  GVQKERMVAEDMYVLSADGKVLSSPVSKPWPNKPPKCTDCAPLFMKAYLMRGAGAVIHSH 134

Query: 136 GIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAID 195
           G+E+C+ TM++P +KEFR+THMEMIKGIKGHGY DELVVPIIENT YE ELTDSLA+AI 
Sbjct: 135 GMETCIATMLDPGAKEFRMTHMEMIKGIKGHGYRDELVVPIIENTPYEYELTDSLAEAIA 194

Query: 196 AYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNF 255
           AYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKL+QLG+DW+TP HGP  + 
Sbjct: 195 AYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLYQLGIDWTTPEHGPINSA 254

Query: 256 KLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGK 315
           K       +   +    ++ S +       C+VLDIEGTTTPISFV++V+FPYARDNV K
Sbjct: 255 KRPRSVLSSSIPNGCPDSKSSKH-------CVVLDIEGTTTPISFVTDVMFPYARDNVRK 307

Query: 316 HLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALVANVDAMIKA 375
           HL+ TY + ET++DIKLLR QVE+DLK G+ G+VPIPP DA KEEVI ALVANV++MIKA
Sbjct: 308 HLTSTYSSDETKEDIKLLRIQVEEDLKNGIVGSVPIPPDDADKEEVINALVANVESMIKA 367

Query: 376 DRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLI 435
           DRKIT+LKQLQGHIWRTGFES EL+G VFDDVPEAL+ WH+ G KVYIYSSGSR AQRL+
Sbjct: 368 DRKITSLKQLQGHIWRTGFESKELQGVVFDDVPEALKHWHASGMKVYIYSSGSREAQRLL 427

Query: 436 FGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKA 495
           FGN+ YGDLR+YL GFFDT  GNKRET SY EI+ SLGVD P++ILF+TDV+QEA AAK+
Sbjct: 428 FGNTAYGDLRQYLCGFFDTTTGNKRETRSYFEISQSLGVDSPAQILFITDVFQEAVAAKS 487

Query: 496 AGLEVVISIRPGNGPLPENHGFKTINSFAEI 526
           AG EV+ISIRPGN PLPENHGF+TI SF+EI
Sbjct: 488 AGFEVIISIRPGNAPLPENHGFRTIKSFSEI 518

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 7

>sp|B8BKI7|MTBC_ORYSI Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Oryza sativa subsp. indica GN=OsI_36120 PE=2 SV=1

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/511 (71%), Positives = 427/511 (83%), Gaps = 7/511 (1%)

Query: 16  THTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPS 75
           T ++AYLEG AV+E R L++ELCRHFY  GWV+GT GSIT+K +D ++P   QLI+MSPS
Sbjct: 15  TESEAYLEGEAVREARELVAELCRHFYGQGWVTGTVGSITVKANDPALPLADQLIVMSPS 74

Query: 76  GVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSH 135
           GVQKERM  EDMYVLS +G  LSSP  KP+P+KPPKC+DCAPLFMKAY  R AGAVIHSH
Sbjct: 75  GVQKERMVAEDMYVLSADGKVLSSPVSKPWPNKPPKCTDCAPLFMKAYLMRGAGAVIHSH 134

Query: 136 GIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAID 195
           G+E+C+ TM++  +KEFR+THMEMIKGIKGHGY DELVVPIIENT YE ELTDSLA+AI 
Sbjct: 135 GMETCIATMLDHGAKEFRMTHMEMIKGIKGHGYRDELVVPIIENTPYEYELTDSLAEAIA 194

Query: 196 AYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNF 255
           AYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKL+QLG+DW+TP HGP  + 
Sbjct: 195 AYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLYQLGIDWTTPEHGPINSA 254

Query: 256 KLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGK 315
           K       +   +    ++ S +       C+VLDIEGTTTPISFV++V+FPYARDNV K
Sbjct: 255 KRPRSVLSSSIPNGCPDSKSSKH-------CVVLDIEGTTTPISFVTDVMFPYARDNVRK 307

Query: 316 HLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALVANVDAMIKA 375
           HL+ TY + ET++DIKLLR QVE+DLK G+ G+VPIPP DA KEEVI ALVANV++MIKA
Sbjct: 308 HLTSTYSSDETKEDIKLLRIQVEEDLKNGIVGSVPIPPDDADKEEVINALVANVESMIKA 367

Query: 376 DRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLI 435
           DRKIT+LKQLQGHIWRTGFES EL+G VFDDVPEAL+ WH+ G KVYIYSSGSR AQRL+
Sbjct: 368 DRKITSLKQLQGHIWRTGFESKELQGVVFDDVPEALKHWHASGMKVYIYSSGSREAQRLL 427

Query: 436 FGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKA 495
           FGN+ YGDLR+YL GFFDT  GNKRET SY EI+ SLGVD P++ILF+TDV+QEA AAK+
Sbjct: 428 FGNTAYGDLRQYLCGFFDTTTGNKRETRSYFEISQSLGVDSPAQILFITDVFQEAVAAKS 487

Query: 496 AGLEVVISIRPGNGPLPENHGFKTINSFAEI 526
           AG EV+ISIRPGN PLPENHGF+TI SF+EI
Sbjct: 488 AGFEVIISIRPGNAPLPENHGFRTIKSFSEI 518

Oryza sativa subsp. indica (taxid: 39946)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 7

>sp|C6JS30|MTBC_SORBI Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Sorghum bicolor GN=SORBIDRAFT_0019s002010 PE=3 SV=1

 Score =  769 bits (1985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/516 (68%), Positives = 426/516 (82%), Gaps = 8/516 (1%)

Query: 11  GAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLI 70
            A  AT ++AYLEG  V+E R L++ELCRHFY  GWV+GTGGSIT+KV+D ++P   +LI
Sbjct: 10  AAVGATASEAYLEGEPVREARELVAELCRHFYAQGWVTGTGGSITVKVNDPAVPLADRLI 69

Query: 71  LMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGA 130
           +MSPSGVQKERM  EDMYV++ +G  LS+P  KP+P+KPPKC+DCAPLFMKAY  R AGA
Sbjct: 70  VMSPSGVQKERMVAEDMYVMAADGKVLSAPVAKPWPNKPPKCTDCAPLFMKAYLMRGAGA 129

Query: 131 VIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSL 190
           VIHSHG+E+C+ TM+NP +KEFR+THMEMIKGIKGHGY DELV+PI+ENT YE ELTDSL
Sbjct: 130 VIHSHGMETCIATMLNPGAKEFRMTHMEMIKGIKGHGYRDELVIPIVENTPYEYELTDSL 189

Query: 191 AKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHG 250
           ++AI AYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYL DA IKL+QLG+DW+TP HG
Sbjct: 190 SEAIAAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLLDACIKLYQLGIDWTTPEHG 249

Query: 251 PTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYAR 310
           P  N K         +  +  +  G         +C+VLDIEGTTTPISFV++V+FPYAR
Sbjct: 250 PINNAKR------QRSILSSEIPNGCRAADS--SKCVVLDIEGTTTPISFVTDVMFPYAR 301

Query: 311 DNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALVANVD 370
           DNV +HL+ T+D+ ET+DDIKLLR Q+EDDL+ G++GAVP+PP +AGKEEVI +LVANV+
Sbjct: 302 DNVREHLTSTFDSEETKDDIKLLRIQIEDDLRNGISGAVPVPPDEAGKEEVINSLVANVE 361

Query: 371 AMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRL 430
           +MIKADRKIT LKQLQGHIWRTGFE  EL+G VF+DVP AL+ WHS G KVYIYSSGSR 
Sbjct: 362 SMIKADRKITPLKQLQGHIWRTGFEKKELQGVVFEDVPVALKNWHSSGIKVYIYSSGSRE 421

Query: 431 AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEA 490
           AQRL+FGN+ YGDLRK+L G+FDT  GNKRET SY E++ SLGVD PS+ILF+TDV+QEA
Sbjct: 422 AQRLLFGNTTYGDLRKFLCGYFDTTTGNKRETRSYFEVSQSLGVDSPSQILFITDVFQEA 481

Query: 491 TAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526
            AAK  G EV+ISIRPGN PLP+NHGF+TI SF+EI
Sbjct: 482 VAAKNTGFEVIISIRPGNAPLPDNHGFRTIKSFSEI 517

Sorghum bicolor (taxid: 4558)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 7

>sp|B4G0F3|MTBC_MAIZE Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Zea mays PE=2 SV=1

 Score =  754 bits (1948), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/516 (68%), Positives = 423/516 (81%), Gaps = 8/516 (1%)

Query: 11  GAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLI 70
            A  A  ++AYLEG  V+E R L++ELCRHFY  GWV+GTGGSIT+KV+D ++P   +LI
Sbjct: 10  AAVGAMASEAYLEGAPVREARELVAELCRHFYAQGWVTGTGGSITVKVNDPTVPLADRLI 69

Query: 71  LMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGA 130
           +MSPSGVQKERM  EDMYV++ +G  LS+P  KP+P+KPPKC+DCAPLFMKAY  R AGA
Sbjct: 70  VMSPSGVQKERMVAEDMYVMAADGKVLSAPVAKPWPNKPPKCTDCAPLFMKAYLMRGAGA 129

Query: 131 VIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSL 190
           VIHSHGIE+C+ TM+ P +KEFR+THMEMIKGIKGHGY+DELV+PIIENT YE ELTDSL
Sbjct: 130 VIHSHGIETCIATMLIPGAKEFRVTHMEMIKGIKGHGYHDELVIPIIENTPYEYELTDSL 189

Query: 191 AKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHG 250
           ++AI AYPKATAVLVRNHGIYVWG+SWINAKTQAECYHYL DA IKL+QLG+DW+TP HG
Sbjct: 190 SEAIAAYPKATAVLVRNHGIYVWGESWINAKTQAECYHYLLDACIKLYQLGIDWTTPEHG 249

Query: 251 PTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYAR 310
              N +         +  +  +  G         +C+VLDIEGTTTPISFV++V+FPYAR
Sbjct: 250 SINNPRRPH------SILSPEICNGCHAADS--SKCVVLDIEGTTTPISFVTDVMFPYAR 301

Query: 311 DNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALVANVD 370
           DNV KHL+ T+D  ET++DIKLLR Q+EDDL+ GVAGAVP+PP + GKEEVI +LVANV+
Sbjct: 302 DNVRKHLTSTFDFEETKEDIKLLRIQIEDDLQNGVAGAVPVPPDEGGKEEVINSLVANVE 361

Query: 371 AMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRL 430
           +MIKADRKIT+LKQLQGHIWR GF+  EL+G VF+DVP AL+ WH+ G KVYIYSSGSR 
Sbjct: 362 SMIKADRKITSLKQLQGHIWRIGFQKKELQGVVFEDVPVALKNWHASGIKVYIYSSGSRE 421

Query: 431 AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEA 490
           AQRL+FGN+ YGDLRK+L G+FDT  GNKRET SY EI+ SLGVD PS+ILF+TDV+QEA
Sbjct: 422 AQRLLFGNTTYGDLRKFLCGYFDTTTGNKRETRSYFEISQSLGVDSPSQILFITDVFQEA 481

Query: 491 TAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526
            AAK AG EV+ISIRPGN PLP+NHGF+TI SF+EI
Sbjct: 482 IAAKNAGFEVIISIRPGNAPLPDNHGFRTIKSFSEI 517

Zea mays (taxid: 4577)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 7

>sp|A9RBS1|MTBC_PHYPA Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_111231 PE=3 SV=1

 Score =  669 bits (1726), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/500 (64%), Positives = 386/500 (77%), Gaps = 15/500 (3%)

Query: 27  VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPED 86
           V++T+ L +ELC+HFY  GWVSGTGGSIT+KV +  +   ++LI+M+PSGVQKERM P D
Sbjct: 21  VEDTKDLAAELCKHFYNQGWVSGTGGSITLKVLESDVDVQERLIVMAPSGVQKERMLPVD 80

Query: 87  MYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMIN 146
           MYVLS +GT LS+P  K  PHKPPKCS+C PLF+KAY+ R+AGAVIHSHG+ESCL TMIN
Sbjct: 81  MYVLSSDGTVLSAPPAKGAPHKPPKCSECCPLFLKAYKMRNAGAVIHSHGLESCLATMIN 140

Query: 147 PMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVR 206
           P +KEFRITHMEMIKGI GHGYYDELVVPIIEN+A E ELTD+LA A++AYPKATAVLVR
Sbjct: 141 PTAKEFRITHMEMIKGIAGHGYYDELVVPIIENSAREYELTDALAAAMEAYPKATAVLVR 200

Query: 207 NHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLGLGSNGNVN 266
           NHGIY+WGDSWI+AKTQAECYHYLF+AA+KLHQLGLD +   HGP    +  L    N  
Sbjct: 201 NHGIYIWGDSWISAKTQAECYHYLFNAALKLHQLGLDPADAKHGPLTRPQT-LPDFANKR 259

Query: 267 TSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAET 326
            ++K V               VLDIEGTTTPISFV+EVLFPYAR+NV      TY++ ET
Sbjct: 260 ATSKNV--------------FVLDIEGTTTPISFVTEVLFPYARENVSSFFKSTYNSPET 305

Query: 327 QDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALVANVDAMIKADRKITALKQLQ 386
            +DI+LLR QV +DL+  V GA  IP   AG + V+AA+  NV AMIKADRK+TALK+LQ
Sbjct: 306 LNDIRLLRDQVHEDLRNNVPGATEIPVESAGIDAVVAAIEKNVQAMIKADRKVTALKELQ 365

Query: 387 GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK 446
           GHIWR G+E+ EL+G VF+DVPEAL KW + G K YIYSSGSR AQ+LIFGN+N+GDLR 
Sbjct: 366 GHIWRIGYENGELKGSVFEDVPEALAKWDARGIKTYIYSSGSREAQKLIFGNTNFGDLRV 425

Query: 447 YLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 506
           YLSGFFDT +G+KRE  SY EI  +LGVD PS I F TDV  EA AAK AGL+ V+ +RP
Sbjct: 426 YLSGFFDTTIGHKREARSYKEIFLTLGVDHPSCITFATDVLAEAVAAKEAGLQAVLLLRP 485

Query: 507 GNGPLPENHGFKTINSFAEI 526
           GN PLP +HGF+T  S  E+
Sbjct: 486 GNAPLPSDHGFRTAKSLLEL 505

Physcomitrella patens subsp. patens (taxid: 145481)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	526
356544052	522	PREDICTED: probable bifunctional methylt	0.992	1.0	0.811	0.0
255574694	527	catalytic, putative [Ricinus communis] g	0.980	0.979	0.825	0.0
356549714	522	PREDICTED: probable bifunctional methylt	0.992	1.0	0.802	0.0
224128103	504	predicted protein [Populus trichocarpa]	0.956	0.998	0.819	0.0
388513301	523	unknown [Medicago truncatula]	0.990	0.996	0.801	0.0
449446923	512	PREDICTED: probable bifunctional methylt	0.973	1.0	0.771	0.0
356517132	518	PREDICTED: probable bifunctional methylt	0.971	0.986	0.811	0.0
356517134	509	PREDICTED: probable bifunctional methylt	0.954	0.986	0.807	0.0
378405187	517	RecName: Full=Probable bifunctional meth	0.982	1.0	0.787	0.0
225461486	544	PREDICTED: probable bifunctional methylt	0.982	0.950	0.787	0.0

>gi|356544052|ref|XP_003540469.1| PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1-like [Glycine max]

 Score =  869 bits (2245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/526 (81%), Positives = 474/526 (90%), Gaps = 4/526 (0%)

Query: 1   MATLAVNGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHD 60
           MA + +NG       T +QAYLEG+AVKETR L++ELCRHFYTLGWV+GTGGSI++KVHD
Sbjct: 1   MAAIGLNGV--KVGTTSSQAYLEGKAVKETRALMAELCRHFYTLGWVTGTGGSISMKVHD 58

Query: 61  DSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFM 120
           DSIPKPQQLILM+PSGVQKERMEPEDMYVLS +G+ LS+PSPKP+PHKPPKCSDC PLF 
Sbjct: 59  DSIPKPQQLILMAPSGVQKERMEPEDMYVLSHSGSVLSAPSPKPWPHKPPKCSDCDPLFK 118

Query: 121 KAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT 180
           KAYE RDA AV HSHGIESCLVTMINP+SKEFRITHMEMIKGIKGHGYYDELVVPIIENT
Sbjct: 119 KAYEMRDAAAVFHSHGIESCLVTMINPLSKEFRITHMEMIKGIKGHGYYDELVVPIIENT 178

Query: 181 AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL 240
           AYE +LT+S AKAI+ YPKATAVLVRNHG++VWGDSWI+AKTQ+ECYHYLFDAA+KLHQ+
Sbjct: 179 AYEYQLTESFAKAIEDYPKATAVLVRNHGVFVWGDSWISAKTQSECYHYLFDAALKLHQM 238

Query: 241 GLDWSTPNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISF 300
           GLDWSTPNHGP ++ + GL   G  N S KA     D  S  FPRC+VLDIEGTTTPISF
Sbjct: 239 GLDWSTPNHGPIQSARRGLSIAGESNVSVKARKSNGD--SDPFPRCVVLDIEGTTTPISF 296

Query: 301 VSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE 360
           VSEVLFPYARDNVG+HLS+TYDT ET+ DIKLL SQV+ DL+QG+AGAVPIPP DAGKEE
Sbjct: 297 VSEVLFPYARDNVGRHLSLTYDTPETKADIKLLCSQVQSDLEQGIAGAVPIPPDDAGKEE 356

Query: 361 VIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTK 420
           V+AALVANV+AMIKADRKITALK+LQGHIWRTG+E+NELEG VFDDVPEALEKWH+LG K
Sbjct: 357 VVAALVANVNAMIKADRKITALKELQGHIWRTGYENNELEGIVFDDVPEALEKWHTLGIK 416

Query: 421 VYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 480
           VYIYSSGSRLAQRLIFG +N+GDLRKYLSGFFDT VGNKRET SYVEI+ SLGVDKPS+I
Sbjct: 417 VYIYSSGSRLAQRLIFGKTNHGDLRKYLSGFFDTTVGNKRETRSYVEISESLGVDKPSDI 476

Query: 481 LFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526
           LFVTDVYQEATAAKAAGLEV+ISIRPGNGPLP+NHGFKTI SF+EI
Sbjct: 477 LFVTDVYQEATAAKAAGLEVIISIRPGNGPLPDNHGFKTIKSFSEI 522

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574694|ref|XP_002528256.1| catalytic, putative [Ricinus communis] gi|296439679|sp|B9SQI7.1|MTBC_RICCO RecName: Full=Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; Includes: RecName: Full=Methylthioribulose-1-phosphate dehydratase; Short=MTRu-1-P dehydratase; Includes: RecName: Full=Enolase-phosphatase E1; AltName: Full=2,3-diketo-5-methylthio-1-phosphopentane phosphatase gi|223532342|gb|EEF34141.1| catalytic, putative [Ricinus communis]

 Score =  867 bits (2241), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/520 (82%), Positives = 467/520 (89%), Gaps = 4/520 (0%)

Query: 7   NGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKP 66
           NGG   A    +QAYLE +AVKETRVLIS+LCR FY LGWVSGTGGSITIKVHDDSIPKP
Sbjct: 12  NGGVKVA----SQAYLESKAVKETRVLISDLCRQFYNLGWVSGTGGSITIKVHDDSIPKP 67

Query: 67  QQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR 126
            QLILMSPSGVQKERMEPEDMYVL+ NG+ LSSPSPKPYPHKPPKCSDC PLF+KAYE  
Sbjct: 68  NQLILMSPSGVQKERMEPEDMYVLAANGSILSSPSPKPYPHKPPKCSDCGPLFLKAYEMC 127

Query: 127 DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENEL 186
           +AGAVIHSHG+ESCLVTMINP+SKEF+ITHMEMIKGIKGHGYYDELVVPIIENTAYENEL
Sbjct: 128 NAGAVIHSHGMESCLVTMINPLSKEFKITHMEMIKGIKGHGYYDELVVPIIENTAYENEL 187

Query: 187 TDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWST 246
           TDSLAKAI+ YPK TAVLVRNHGIY+WGDSWI+AKTQAECYHYLFDAAIKLHQLGLDWST
Sbjct: 188 TDSLAKAIEEYPKTTAVLVRNHGIYIWGDSWISAKTQAECYHYLFDAAIKLHQLGLDWST 247

Query: 247 PNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLF 306
           PNHG  +N K  +GSN ++NTS KA  + S++G    P CIVLDIEGTTTPI+FV++VLF
Sbjct: 248 PNHGLIQNVKALIGSNRDINTSVKAGLKDSNHGMQSLPGCIVLDIEGTTTPITFVADVLF 307

Query: 307 PYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALV 366
           PYARDNVG+HL  TY+TAETQDDIKLLR+QVEDDL +GV  AV IPP DAGKEEVIAALV
Sbjct: 308 PYARDNVGRHLYATYETAETQDDIKLLRTQVEDDLARGVNEAVSIPPDDAGKEEVIAALV 367

Query: 367 ANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSS 426
           ANV+AMIKADRKITALKQLQGHIWRTGF++NELEG V+DDVPEALEKWH+LG KVYIYSS
Sbjct: 368 ANVEAMIKADRKITALKQLQGHIWRTGFQNNELEGVVYDDVPEALEKWHALGIKVYIYSS 427

Query: 427 GSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDV 486
           GSRLAQRLIFG +NYGDLRKYLSGFFDT VGNKRET SY+EI+ S+GVD+PSEILFVTDV
Sbjct: 428 GSRLAQRLIFGKTNYGDLRKYLSGFFDTTVGNKRETRSYIEISESVGVDRPSEILFVTDV 487

Query: 487 YQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526
            QEA AAK AGLE VISIR GN PLPENHGFKTINS +EI
Sbjct: 488 VQEAVAAKGAGLEAVISIRQGNAPLPENHGFKTINSLSEI 527

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549714|ref|XP_003543236.1| PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1-like [Glycine max]

 Score =  860 bits (2222), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/526 (80%), Positives = 472/526 (89%), Gaps = 4/526 (0%)

Query: 1   MATLAVNGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHD 60
           MA + +NG       T +QAYLEG+AVKETR L++ELCRHFYTLGWV+GTGGSI++KVHD
Sbjct: 1   MAAIGLNGV--KVGTTSSQAYLEGKAVKETRALMAELCRHFYTLGWVTGTGGSISMKVHD 58

Query: 61  DSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFM 120
           DSIP+PQQLILM+PSGVQKERMEPEDMYVLS +G+ LS+PSPKP+PHKPPKCSDC PLF 
Sbjct: 59  DSIPRPQQLILMAPSGVQKERMEPEDMYVLSHSGSVLSAPSPKPWPHKPPKCSDCDPLFK 118

Query: 121 KAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT 180
           KAYE  DA AV HSHGIESCLVTMINP+SKEFRITHMEMIKGIKGHGYYDELVVPIIENT
Sbjct: 119 KAYEMCDAAAVFHSHGIESCLVTMINPLSKEFRITHMEMIKGIKGHGYYDELVVPIIENT 178

Query: 181 AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL 240
           AYE +LT+S AKAI+ YPKATAVLVRNHG++VWGDSWI+AKTQ+ECYHYLFDAA+KLHQ+
Sbjct: 179 AYEYQLTESFAKAIEDYPKATAVLVRNHGVFVWGDSWISAKTQSECYHYLFDAALKLHQM 238

Query: 241 GLDWSTPNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISF 300
           GLDWSTPNHGP ++ + GL   G  N S KA     D  S   PRC+VLDIEGTTTPISF
Sbjct: 239 GLDWSTPNHGPIQSARRGLSIAGESNVSVKARKSNGD--SDPLPRCVVLDIEGTTTPISF 296

Query: 301 VSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE 360
           VSEVLFPYARDNVG+HLS+TYDT ET+ DIKLLRSQV+ DL+QG+AGAVPIPP DAGK+E
Sbjct: 297 VSEVLFPYARDNVGRHLSLTYDTPETKADIKLLRSQVQSDLEQGIAGAVPIPPDDAGKQE 356

Query: 361 VIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTK 420
           VIAALVANVDAMIKADRKITALK+LQGHIW+TG+E+NELEG V+DDVPEALEKWH+LG K
Sbjct: 357 VIAALVANVDAMIKADRKITALKELQGHIWKTGYENNELEGIVYDDVPEALEKWHALGIK 416

Query: 421 VYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 480
           VYIYSSGSRLAQRLIFG +N+GDLRKYLSGFFDT VGNKRET SYVEI+ SLGV+KPS+I
Sbjct: 417 VYIYSSGSRLAQRLIFGKTNHGDLRKYLSGFFDTTVGNKRETRSYVEISESLGVEKPSDI 476

Query: 481 LFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526
           LFVTDVYQEATAA AAGLEV+ISIRPGNGPLP+NHGFKTI SF+EI
Sbjct: 477 LFVTDVYQEATAATAAGLEVIISIRPGNGPLPDNHGFKTIKSFSEI 522

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224128103|ref|XP_002329082.1| predicted protein [Populus trichocarpa] gi|296439678|sp|B9N1F9.1|MTBC_POPTR RecName: Full=Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; Includes: RecName: Full=Methylthioribulose-1-phosphate dehydratase; Short=MTRu-1-P dehydratase; Includes: RecName: Full=Enolase-phosphatase E1; AltName: Full=2,3-diketo-5-methylthio-1-phosphopentane phosphatase gi|222869751|gb|EEF06882.1| predicted protein [Populus trichocarpa]

 Score =  858 bits (2218), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/515 (81%), Positives = 464/515 (90%), Gaps = 12/515 (2%)

Query: 12  AAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLIL 71
           AAA   +QAYLE +AVK+TRVLI++LC+ FYTLGWVSGTGGSITIK HDDSIPK QQLIL
Sbjct: 2   AAAKVASQAYLESKAVKDTRVLIADLCKQFYTLGWVSGTGGSITIKAHDDSIPKRQQLIL 61

Query: 72  MSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAV 131
           MSPSGVQKERMEPEDMYVL+ NG+ LSSPSPKPYP+KPPKCSDCAPLF+KAY+ R+AGAV
Sbjct: 62  MSPSGVQKERMEPEDMYVLATNGSILSSPSPKPYPYKPPKCSDCAPLFLKAYDMRNAGAV 121

Query: 132 IHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLA 191
           IHSHG+ESCLVTMINP+SKEFRITHMEMIKGI+GHGYYDELVVPIIENTAYENELTDSLA
Sbjct: 122 IHSHGMESCLVTMINPLSKEFRITHMEMIKGIQGHGYYDELVVPIIENTAYENELTDSLA 181

Query: 192 KAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGP 251
           KAI+AYPK TAVLVRNHGIY+WGDSWI+AKTQAECYHYLFDAAIKLHQ+GLDWSTPNHGP
Sbjct: 182 KAIEAYPKTTAVLVRNHGIYIWGDSWISAKTQAECYHYLFDAAIKLHQIGLDWSTPNHGP 241

Query: 252 TRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARD 311
            +N K+  G N + N                 PRCIVLDIEGTTTPI+FV++VLFPYARD
Sbjct: 242 IQNVKVKAGMNNSNNRIEP------------LPRCIVLDIEGTTTPITFVADVLFPYARD 289

Query: 312 NVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALVANVDA 371
           NVG+HLS TYDTAET+DDI LLR+QVEDDL QGV GA+PIP  DAGKEEVIAALVANV+A
Sbjct: 290 NVGRHLSATYDTAETKDDINLLRTQVEDDLAQGVDGAIPIPTDDAGKEEVIAALVANVEA 349

Query: 372 MIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLA 431
           MIKADRKITALKQLQGHIWRTG+E+NELEG V+DDVPEALEKWH+LG KVYIYSSGSRLA
Sbjct: 350 MIKADRKITALKQLQGHIWRTGYENNELEGVVYDDVPEALEKWHALGIKVYIYSSGSRLA 409

Query: 432 QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEAT 491
           QRLIFG +NYGDLRKYLSGFFDT VGNK+ET SY+EI+ SLGVDKPS+ILFVTDV+QEA 
Sbjct: 410 QRLIFGKTNYGDLRKYLSGFFDTTVGNKKETRSYIEISESLGVDKPSDILFVTDVFQEAF 469

Query: 492 AAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526
           AAK AGL+V+ISIRPGN PLPENHGFKTI SFAEI
Sbjct: 470 AAKGAGLDVMISIRPGNAPLPENHGFKTITSFAEI 504

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388513301|gb|AFK44712.1| unknown [Medicago truncatula]

 Score =  853 bits (2204), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/525 (80%), Positives = 470/525 (89%), Gaps = 4/525 (0%)

Query: 2   ATLAVNGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDD 61
           A + +NG     A++  QAYLEG+AVKET+ L++ELCRHFY+LGWVSGTGGSI+IKVHDD
Sbjct: 3   AAIGLNGAKLGTASS--QAYLEGKAVKETKALMAELCRHFYSLGWVSGTGGSISIKVHDD 60

Query: 62  SIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMK 121
           SIPKPQQLILMSPS VQKERME EDMYVLS NG+ LS+PSPKPYPHKPPKC+DC  LFMK
Sbjct: 61  SIPKPQQLILMSPSAVQKERMEAEDMYVLSDNGSVLSAPSPKPYPHKPPKCTDCDQLFMK 120

Query: 122 AYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTA 181
           AYEKRDAGA+IHSHG+ESCLVTMINP SKEFRITHMEMIKGIKGHGYYDELVVPII+NTA
Sbjct: 121 AYEKRDAGAIIHSHGMESCLVTMINPFSKEFRITHMEMIKGIKGHGYYDELVVPIIDNTA 180

Query: 182 YENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 241
           +E++LT+S  KAI+ YPKATAVLVRNHGI+VWGDSWI+AKTQ+ECYHYLFDAAIKLHQ G
Sbjct: 181 HEHQLTESFTKAIEDYPKATAVLVRNHGIFVWGDSWISAKTQSECYHYLFDAAIKLHQKG 240

Query: 242 LDWSTPNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFV 301
           LDWSTPNHGP ++ + GL   G  N SAKA  +  D      PRCIVLDIEGTTTPISFV
Sbjct: 241 LDWSTPNHGPIQSARRGLSIAGESNISAKARKDNGDIDP--HPRCIVLDIEGTTTPISFV 298

Query: 302 SEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEV 361
           SEVLFPYARDNVG+HLS TYDTAET+ DIKLLRSQVE DL+QG+AGAVPIPP DAGK+EV
Sbjct: 299 SEVLFPYARDNVGRHLSATYDTAETKADIKLLRSQVESDLEQGIAGAVPIPPDDAGKDEV 358

Query: 362 IAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKV 421
           IAA+VANVDAMIKADRKITALK+LQGHIW+TG+ +NELEG VFDDVPEALEKW++LG KV
Sbjct: 359 IAAIVANVDAMIKADRKITALKELQGHIWQTGYANNELEGIVFDDVPEALEKWNALGIKV 418

Query: 422 YIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 481
           YIYSSGSRLAQRLIFG +NYGDLRK+LSGFFDT VGNK+ET SYVEI  SLGVDKPS+IL
Sbjct: 419 YIYSSGSRLAQRLIFGKTNYGDLRKFLSGFFDTTVGNKKETQSYVEIFQSLGVDKPSDIL 478

Query: 482 FVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526
           FVTDVYQEATAAK AGLEV+ISIRPGNGPLP +HGFKT+ SF++I
Sbjct: 479 FVTDVYQEATAAKGAGLEVIISIRPGNGPLPGSHGFKTVKSFSDI 523

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446923|ref|XP_004141220.1| PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1-like [Cucumis sativus]

 Score =  842 bits (2175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/526 (77%), Positives = 452/526 (85%), Gaps = 14/526 (2%)

Query: 1   MATLAVNGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHD 60
           MAT +  G  G   A  +  +LE + V ET+ L++ELCRHFY LGWVSGTGGSITIKVHD
Sbjct: 1   MATASDVGVNGDKRAKISPDFLESKGVHETKTLLAELCRHFYGLGWVSGTGGSITIKVHD 60

Query: 61  DSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFM 120
           D+IPK  QL++MSPSGVQKERM PEDMYVLS +G+ +SSP+ KPYPHKPPKCSDC PLFM
Sbjct: 61  DAIPKQNQLVVMSPSGVQKERMVPEDMYVLSPDGSVISSPTVKPYPHKPPKCSDCGPLFM 120

Query: 121 KAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT 180
           KAY+ RDAGAVIHSHGIESCL TMINP +KEFRITHMEMIKGIKGHGYYDELV+PIIENT
Sbjct: 121 KAYQMRDAGAVIHSHGIESCLATMINPSAKEFRITHMEMIKGIKGHGYYDELVIPIIENT 180

Query: 181 AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL 240
           AYE ELT+SLAKAI+AYPK TAVLVRNHGIYVWGDSWI+AKTQAECYHYLFDAAIKL+QL
Sbjct: 181 AYEYELTESLAKAIEAYPKTTAVLVRNHGIYVWGDSWIHAKTQAECYHYLFDAAIKLYQL 240

Query: 241 GLDWSTPNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISF 300
           GLDWSTPNHGP + FK       N   S K              RCIVLDIEGTTTPISF
Sbjct: 241 GLDWSTPNHGPIQKFKEVAVGGCNDEASLK--------------RCIVLDIEGTTTPISF 286

Query: 301 VSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE 360
           V++VLFPYARDNV KHLS+T+DTAET++DIKLL SQV+DDL++GVAGAVPIPP D+ KEE
Sbjct: 287 VTDVLFPYARDNVHKHLSLTFDTAETKEDIKLLISQVQDDLEKGVAGAVPIPPDDSAKEE 346

Query: 361 VIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTK 420
           VIAA+VANV+AMIKADRKI ALKQLQGHIW TGFE+NEL+GEVF+DVP ALE+WH+ G K
Sbjct: 347 VIAAIVANVEAMIKADRKIPALKQLQGHIWLTGFENNELKGEVFEDVPRALERWHASGIK 406

Query: 421 VYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 480
           VYIYSSGSRLAQRL+FGN+ YGDLRKYLSG+FDTAVGNKRET SYVEI  S+GVDKPSEI
Sbjct: 407 VYIYSSGSRLAQRLLFGNTKYGDLRKYLSGYFDTAVGNKRETRSYVEIRESVGVDKPSEI 466

Query: 481 LFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526
           LFVTDVYQEA AAKAAGL+V ISIRPGN PLP+NHGFK I SF+EI
Sbjct: 467 LFVTDVYQEAVAAKAAGLDVNISIRPGNAPLPDNHGFKIIQSFSEI 512

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356517132|ref|XP_003527244.1| PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1-like isoform 1 [Glycine max]

 Score =  841 bits (2173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/514 (81%), Positives = 458/514 (89%), Gaps = 3/514 (0%)

Query: 13  AAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILM 72
           A +  +QAYLEG AVKETR+LISELCRHFY+LGWVSGTGGSITIKVHDDSI KP QLILM
Sbjct: 8   ADSVSSQAYLEGNAVKETRILISELCRHFYSLGWVSGTGGSITIKVHDDSISKPHQLILM 67

Query: 73  SPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVI 132
           SPSGVQKERMEPEDMYVLS  G+ LS+PSPKPYPHKPPKCSDC PLFMKAYE  DAGAVI
Sbjct: 68  SPSGVQKERMEPEDMYVLSHTGSVLSAPSPKPYPHKPPKCSDCGPLFMKAYEMCDAGAVI 127

Query: 133 HSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAK 192
           HSHGIESCLVTM+NP++KEF+ITHMEMIKGIKGHGYYDELV+PIIENTAYE ELT+SLAK
Sbjct: 128 HSHGIESCLVTMLNPLAKEFKITHMEMIKGIKGHGYYDELVIPIIENTAYEYELTESLAK 187

Query: 193 AIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPT 252
           AI+AYPK TAVLVRNHGIY+WGDSWI+AKTQAECYHYLFDAAIKLHQLGLDWSTPNHGP 
Sbjct: 188 AIEAYPKTTAVLVRNHGIYIWGDSWISAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPI 247

Query: 253 RNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARDN 312
           ++ +  L   G  N S K      +     FPRCIVLDIEGTTTPISFV+EVLFPYAR N
Sbjct: 248 KSLR-SLMIAGESNASDKTRKASGEIDP--FPRCIVLDIEGTTTPISFVTEVLFPYARQN 304

Query: 313 VGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALVANVDAM 372
           VG+HLSVTYDT +T+ DIKLL SQV+ DLKQG+AGAVPIP   A K  VI ALV NV+AM
Sbjct: 305 VGRHLSVTYDTPDTEADIKLLCSQVQSDLKQGIAGAVPIPSDGACKRAVIDALVTNVEAM 364

Query: 373 IKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQ 432
           IKADRKITALK+LQGH+WRTG+E+NEL+G VFDDVPEALEKWH+LG KVYIYSSGSRLAQ
Sbjct: 365 IKADRKITALKELQGHMWRTGYENNELKGIVFDDVPEALEKWHTLGIKVYIYSSGSRLAQ 424

Query: 433 RLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATA 492
           RLIFG++N+GDLRKYLSGFFDT VGNKRET SYVEI+ SLGVDKPS+ILFVTDVYQEATA
Sbjct: 425 RLIFGHTNHGDLRKYLSGFFDTTVGNKRETRSYVEISESLGVDKPSDILFVTDVYQEATA 484

Query: 493 AKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526
           AKAAGLEV+IS+RPGN PLPENHGFK I+SF+EI
Sbjct: 485 AKAAGLEVIISVRPGNAPLPENHGFKMISSFSEI 518

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356517134|ref|XP_003527245.1| PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1-like isoform 2 [Glycine max]

 Score =  835 bits (2156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/514 (80%), Positives = 455/514 (88%), Gaps = 12/514 (2%)

Query: 13  AAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILM 72
           A +  +QAYLEG AVKETR+LISELCRHFY+LGWVSGTGGSITIKVHDDSI KP QLILM
Sbjct: 8   ADSVSSQAYLEGNAVKETRILISELCRHFYSLGWVSGTGGSITIKVHDDSISKPHQLILM 67

Query: 73  SPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVI 132
           SPSGVQKERMEPEDMYVLS  G+ LS+PSPKPYPHKPPKCSDC PLFMKAYE  DAGAVI
Sbjct: 68  SPSGVQKERMEPEDMYVLSHTGSVLSAPSPKPYPHKPPKCSDCGPLFMKAYEMCDAGAVI 127

Query: 133 HSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAK 192
           HSHGIESCLVTM+NP++KEF+ITHMEMIKGIKGHGYYDELV+PIIENTAYE ELT+SLAK
Sbjct: 128 HSHGIESCLVTMLNPLAKEFKITHMEMIKGIKGHGYYDELVIPIIENTAYEYELTESLAK 187

Query: 193 AIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPT 252
           AI+AYPK TAVLVRNHGIY+WGDSWI+AKTQAECYHYLFDAAIKLHQLGLDWSTPNHGP 
Sbjct: 188 AIEAYPKTTAVLVRNHGIYIWGDSWISAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPI 247

Query: 253 RNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARDN 312
           ++ +  L   G  N S K              RCIVLDIEGTTTPISFV+EVLFPYAR N
Sbjct: 248 KSLR-SLMIAGESNASDKT-----------RKRCIVLDIEGTTTPISFVTEVLFPYARQN 295

Query: 313 VGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALVANVDAM 372
           VG+HLSVTYDT +T+ DIKLL SQV+ DLKQG+AGAVPIP   A K  VI ALV NV+AM
Sbjct: 296 VGRHLSVTYDTPDTEADIKLLCSQVQSDLKQGIAGAVPIPSDGACKRAVIDALVTNVEAM 355

Query: 373 IKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQ 432
           IKADRKITALK+LQGH+WRTG+E+NEL+G VFDDVPEALEKWH+LG KVYIYSSGSRLAQ
Sbjct: 356 IKADRKITALKELQGHMWRTGYENNELKGIVFDDVPEALEKWHTLGIKVYIYSSGSRLAQ 415

Query: 433 RLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATA 492
           RLIFG++N+GDLRKYLSGFFDT VGNKRET SYVEI+ SLGVDKPS+ILFVTDVYQEATA
Sbjct: 416 RLIFGHTNHGDLRKYLSGFFDTTVGNKRETRSYVEISESLGVDKPSDILFVTDVYQEATA 475

Query: 493 AKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526
           AKAAGLEV+IS+RPGN PLPENHGFK I+SF+EI
Sbjct: 476 AKAAGLEVIISVRPGNAPLPENHGFKMISSFSEI 509

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|378405187|sp|E0CSI1.2|MTBC1_VITVI RecName: Full=Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1; Includes: RecName: Full=Methylthioribulose-1-phosphate dehydratase; Short=MTRu-1-P dehydratase; Includes: RecName: Full=Enolase-phosphatase E1; AltName: Full=2,3-diketo-5-methylthio-1-phosphopentane phosphatase

 Score =  834 bits (2155), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/526 (78%), Positives = 466/526 (88%), Gaps = 9/526 (1%)

Query: 1   MATLAVNGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHD 60
           MA  A+NG   AA    +QAYLE   V +TR L+S+LCRHFY LGWVSGTGGSITIKVHD
Sbjct: 1   MAAAALNGLKMAAT---SQAYLESMPVNDTRKLLSDLCRHFYGLGWVSGTGGSITIKVHD 57

Query: 61  DSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFM 120
           +SIPKPQQLI+MSPSGVQKERM PEDMYVLS +G  LSSPSPKPYP+KPPKCSDCAPLFM
Sbjct: 58  ESIPKPQQLIVMSPSGVQKERMVPEDMYVLSPSGCFLSSPSPKPYPNKPPKCSDCAPLFM 117

Query: 121 KAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT 180
           KAY  R+AGAVIHSHG+ESC+VTMI+P+SKEFRITHMEMIKGI+GHGYYDELVVPIIENT
Sbjct: 118 KAYLMRNAGAVIHSHGMESCIVTMIDPLSKEFRITHMEMIKGIQGHGYYDELVVPIIENT 177

Query: 181 AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL 240
           A+E ELTD+LA+AI+AYPK TAVLVRNHGIY+WGDSWI+AKTQAECYHYLFDAAIKL+QL
Sbjct: 178 AHERELTDALAEAIEAYPKTTAVLVRNHGIYIWGDSWIHAKTQAECYHYLFDAAIKLYQL 237

Query: 241 GLDWSTPNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISF 300
           GLDWSTP+HGP + +       G  N S KA T  S++ +    RCIVLDIEGTTTPISF
Sbjct: 238 GLDWSTPDHGPIKKY------GGKTNMSVKAGTVNSNHETEPSRRCIVLDIEGTTTPISF 291

Query: 301 VSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE 360
           V++VLFP+AR+NV +HL+ TY+T ETQDDIKLLR+QV+ DL+QG+ GAVPIPP DAGKEE
Sbjct: 292 VTDVLFPFARNNVSRHLAATYETDETQDDIKLLRTQVQSDLEQGIVGAVPIPPDDAGKEE 351

Query: 361 VIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTK 420
           VIAALVANV+AMIKADRKITALKQLQGHIWRTGF++NELEG VF+DVPEAL+KWH+ G K
Sbjct: 352 VIAALVANVEAMIKADRKITALKQLQGHIWRTGFQNNELEGVVFEDVPEALQKWHASGIK 411

Query: 421 VYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 480
           VYIYSSGSRLAQRL+FG +NYGDLRKYL GFFDT VGNKRET SYVEIT S+GVDKPSEI
Sbjct: 412 VYIYSSGSRLAQRLLFGYTNYGDLRKYLCGFFDTTVGNKRETKSYVEITESVGVDKPSEI 471

Query: 481 LFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526
           LFVTDVYQEA AAKAAGLEV+ISIRPGNGPLP+NHGFKTI SF++I
Sbjct: 472 LFVTDVYQEAVAAKAAGLEVIISIRPGNGPLPDNHGFKTITSFSDI 517

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461486|ref|XP_002285049.1| PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1-like [Vitis vinifera]

 Score =  834 bits (2155), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/526 (78%), Positives = 466/526 (88%), Gaps = 9/526 (1%)

Query: 1   MATLAVNGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHD 60
           MA  A+NG   AA    +QAYLE   V +TR L+S+LCRHFY LGWVSGTGGSITIKVHD
Sbjct: 28  MAAAALNGLKMAAT---SQAYLESMPVNDTRKLLSDLCRHFYGLGWVSGTGGSITIKVHD 84

Query: 61  DSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFM 120
           +SIPKPQQLI+MSPSGVQKERM PEDMYVLS +G  LSSPSPKPYP+KPPKCSDCAPLFM
Sbjct: 85  ESIPKPQQLIVMSPSGVQKERMVPEDMYVLSPSGCFLSSPSPKPYPNKPPKCSDCAPLFM 144

Query: 121 KAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT 180
           KAY  R+AGAVIHSHG+ESC+VTMI+P+SKEFRITHMEMIKGI+GHGYYDELVVPIIENT
Sbjct: 145 KAYLMRNAGAVIHSHGMESCIVTMIDPLSKEFRITHMEMIKGIQGHGYYDELVVPIIENT 204

Query: 181 AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL 240
           A+E ELTD+LA+AI+AYPK TAVLVRNHGIY+WGDSWI+AKTQAECYHYLFDAAIKL+QL
Sbjct: 205 AHERELTDALAEAIEAYPKTTAVLVRNHGIYIWGDSWIHAKTQAECYHYLFDAAIKLYQL 264

Query: 241 GLDWSTPNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISF 300
           GLDWSTP+HGP + +       G  N S KA T  S++ +    RCIVLDIEGTTTPISF
Sbjct: 265 GLDWSTPDHGPIKKY------GGKTNMSVKAGTVNSNHETEPSRRCIVLDIEGTTTPISF 318

Query: 301 VSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE 360
           V++VLFP+AR+NV +HL+ TY+T ETQDDIKLLR+QV+ DL+QG+ GAVPIPP DAGKEE
Sbjct: 319 VTDVLFPFARNNVSRHLAATYETDETQDDIKLLRTQVQSDLEQGIVGAVPIPPDDAGKEE 378

Query: 361 VIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTK 420
           VIAALVANV+AMIKADRKITALKQLQGHIWRTGF++NELEG VF+DVPEAL+KWH+ G K
Sbjct: 379 VIAALVANVEAMIKADRKITALKQLQGHIWRTGFQNNELEGVVFEDVPEALQKWHASGIK 438

Query: 421 VYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 480
           VYIYSSGSRLAQRL+FG +NYGDLRKYL GFFDT VGNKRET SYVEIT S+GVDKPSEI
Sbjct: 439 VYIYSSGSRLAQRLLFGYTNYGDLRKYLCGFFDTTVGNKRETKSYVEITESVGVDKPSEI 498

Query: 481 LFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526
           LFVTDVYQEA AAKAAGLEV+ISIRPGNGPLP+NHGFKTI SF++I
Sbjct: 499 LFVTDVYQEAVAAKAAGLEVIISIRPGNGPLPDNHGFKTITSFSDI 544

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	526
TAIR|locus:2154664	507	AT5G53850 [Arabidopsis thalian	0.941	0.976	0.736	2.3e-204
UNIPROTKB|E1C489	261	ENOPH1 "Uncharacterized protei	0.454	0.915	0.491	2.9e-55
UNIPROTKB|Q0VD27	261	ENOPH1 "Enolase-phosphatase E1	0.450	0.908	0.467	1.3e-54
UNIPROTKB|F1RVD2	261	ENOPH1 "Uncharacterized protei	0.450	0.908	0.471	5.5e-54
RGD|1309016	261	Enoph1 "enolase-phosphatase 1"	0.450	0.908	0.465	7e-54
UNIPROTKB|Q28C69	259	enoph1 "Enolase-phosphatase E1	0.450	0.915	0.487	3e-53
UNIPROTKB|Q9UHY7	261	ENOPH1 "Enolase-phosphatase E1	0.450	0.908	0.459	2.1e-52
MGI|MGI:1915120	257	Enoph1 "enolase-phosphatase 1"	0.450	0.922	0.456	4.4e-52
UNIPROTKB|E2QU97	260	ENOPH1 "Uncharacterized protei	0.450	0.911	0.455	3.1e-51
UNIPROTKB|Q0VCJ2	242	APIP "Methylthioribulose-1-pho	0.380	0.826	0.506	5.1e-51

TAIR|locus:2154664 AT5G53850 [Arabidopsis thaliana (taxid:3702)]

 Score = 1977 (701.0 bits), Expect = 2.3e-204, P = 2.3e-204
 Identities = 374/508 (73%), Positives = 435/508 (85%)

Query:    19 QAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQ 78
             QAYLEG+ VKET  L++ELCRHFYT GWVSGTGGSIT+KVHD SIPKP+QLI+MSPSGVQ
Sbjct:    13 QAYLEGKEVKETSSLVTELCRHFYTQGWVSGTGGSITMKVHDASIPKPEQLIVMSPSGVQ 72

Query:    79 KERMEPEDMYVLSGNGTTLXXXXXXXXXXXXXXCSDCAPLFMKAYEKRDAGAVIHSHGIE 138
             KERM+PEDMY+LS NG+ +              C+DCAPLFMKAYE R+AGAVIHSHG+E
Sbjct:    73 KERMQPEDMYILSANGSIISTPSPKPYPNKPPKCTDCAPLFMKAYEMRNAGAVIHSHGME 132

Query:   139 SCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYP 198
             SCLVTM+NP +KEFRITHMEMIKGI+GHGYYDELVVPIIENTAYENELTDSL KAI+AYP
Sbjct:   133 SCLVTMLNPQAKEFRITHMEMIKGIQGHGYYDELVVPIIENTAYENELTDSLTKAIEAYP 192

Query:   199 KATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLG 258
             KATAVLVRNHG+Y+WGDSWI+AKTQAECYHYLFDAAIKLHQLGLD +TP+HGP R     
Sbjct:   193 KATAVLVRNHGVYIWGDSWIHAKTQAECYHYLFDAAIKLHQLGLDAATPDHGPIRR---- 248

Query:   259 LGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLS 318
                   +++  K     S Y      R IVLDIEGTTTPI+FV++VLFPYAR+NVGKHL+
Sbjct:   249 -----TIHSQIK----DSQYEREWPRRWIVLDIEGTTTPITFVTDVLFPYARENVGKHLN 299

Query:   319 VTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALVANVDAMIKADRK 378
             +TY TAETQ+DIKLLR+QVE+DL++GV GAVPIP  D GKE+VIAA+V+NV+AMI+ADRK
Sbjct:   300 LTYHTAETQEDIKLLRAQVEEDLREGVTGAVPIPHADEGKEKVIAAMVSNVEAMIRADRK 359

Query:   379 ITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN 438
             ITALK+LQGHIWRTGFE +EL+  VF+DV +ALEKWHS G KVYIYSSGSRLAQ+L+FGN
Sbjct:   360 ITALKELQGHIWRTGFECDELKAIVFEDVADALEKWHSSGIKVYIYSSGSRLAQKLLFGN 419

Query:   439 SNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGL 498
             ++YGDLRKY+SGFFDT +GNK+E+ SY EI  +LGVD P+EI+FVTDVYQEA AAKAAGL
Sbjct:   420 TDYGDLRKYISGFFDTTIGNKKESRSYKEIKETLGVDDPAEIMFVTDVYQEAVAAKAAGL 479

Query:   499 EVVISIRPGNGPLPENHGFKTINSFAEI 526
             E +ISIRPGN PLPENHGFKT+ SF++I
Sbjct:   480 EAIISIRPGNAPLPENHGFKTVTSFSQI 507

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=ISS

GO:0019509 "L-methionine salvage from methylthioadenosine" evidence=IEA

GO:0043167 "ion binding" evidence=IEA

GO:0043874 "acireductone synthase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0071267 "L-methionine salvage" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

UNIPROTKB|E1C489 ENOPH1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
 Identities = 122/248 (49%), Positives = 160/248 (64%)

Query:   285 RCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQG 344
             R I+LD+EGTTTPI+FV E LFPY RDNV ++L   ++  E Q D+ LLR Q ++D   G
Sbjct:    11 RAILLDVEGTTTPIAFVQETLFPYIRDNVEQYLRAHWEEEECQRDVGLLRQQAQED--SG 68

Query:   345 VAGAVPIP----PGDAGKEEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELE 400
             + GAVPIP     GD   E VI A+V NV   +  DRK TALKQLQGH+WR  + +  ++
Sbjct:    69 LDGAVPIPLESGSGDEELERVIRAVVDNVHWQMALDRKTTALKQLQGHMWRAAYATGLVK 128

Query:   401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKR 460
             GE+F+DV  A+ KW   G KVYIYSSGS  AQ+L+FG S  GD+ +   G FDT +G K 
Sbjct:   129 GEIFEDVVPAIRKWREAGMKVYIYSSGSVEAQKLLFGYSTEGDILELFDGHFDTKIGPKV 188

Query:   461 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG--FK 518
             E+ SY  I  S+G D  + ILF+TDV +EA AA+ A   V + IRPGN  L ++    + 
Sbjct:   189 ESESYRRIAASIGCDT-NNILFLTDVPREANAAEEADTHVAVVIRPGNAGLTDDEKSYYS 247

Query:   519 TINSFAEI 526
              I+SF E+
Sbjct:   248 LISSFTEL 255

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA

GO:0019509 "L-methionine salvage from methylthioadenosine" evidence=IEA

GO:0043874 "acireductone synthase activity" evidence=IEA

UNIPROTKB|Q0VD27 ENOPH1 "Enolase-phosphatase E1" [Bos taurus (taxid:9913)]

 Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
 Identities = 115/246 (46%), Positives = 166/246 (67%)

Query:   287 IVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVA 346
             I+LDIEGTTTPI+FV ++LFPY ++NV ++L   ++  E Q D++LLR Q E+D    + 
Sbjct:    13 ILLDIEGTTTPIAFVKDILFPYVKENVEEYLQAHWEEEECQQDVRLLRKQAEED--SHLD 70

Query:   347 GAVPIPPGDA-GKEE---VIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGE 402
             GAVPIP     G ++   +I A+V NV   +  DRK TALKQLQGH+WR  F++  ++ E
Sbjct:    71 GAVPIPAASGNGADDPQWMIQAVVDNVYWQMSLDRKTTALKQLQGHMWRAAFKAGHMKAE 130

Query:   403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRET 462
              F+DV  A+ KW   G KVY+YSSGS  AQ+L+FG+S  GD+ + + G FDT +G+K E+
Sbjct:   131 FFEDVVPAVRKWREAGMKVYVYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVES 190

Query:   463 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG--FKTI 520
              SY +I +S+G    + ILF+TDV +EA+AA+ AG+ V + +RPGN  L ++    F  I
Sbjct:   191 ESYQKIASSIGCST-NNILFLTDVSREASAAEEAGVHVAVVVRPGNAGLTDDEKTHFSLI 249

Query:   521 NSFAEI 526
              SF+E+
Sbjct:   250 TSFSEL 255

GO:0043874 "acireductone synthase activity" evidence=ISS

GO:0019509 "L-methionine salvage from methylthioadenosine" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

UNIPROTKB|F1RVD2 ENOPH1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
 Identities = 116/246 (47%), Positives = 163/246 (66%)

Query:   287 IVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVA 346
             I+LDIEGTTTPI+FV ++LFPY  D+V ++L   ++  E Q D+ LLR Q E+D    + 
Sbjct:    13 ILLDIEGTTTPIAFVKDILFPYIEDHVKEYLQTHWEEEECQQDVSLLRKQAEEDAH--LD 70

Query:   347 GAVPIPP----GDAGKEEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGE 402
             GAVPIP     G+  +E +I A+V NV   +  DRK TALKQLQGH+WR  F++  ++ E
Sbjct:    71 GAVPIPAASGDGEDDRERMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFKAGLMKAE 130

Query:   403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRET 462
              F+DV  A+ KW   G KVY+YSSGS  AQ+L+FG+S  GD+ +   G FDT +G+K E+
Sbjct:   131 FFEDVVPAVRKWREAGMKVYVYSSGSVEAQKLLFGHSTEGDVLELFDGHFDTKIGHKVES 190

Query:   463 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG--FKTI 520
              SY +I +S+G    S ILF+TDV  EA+AA+AA + V + +RPGN  L ++    ++ I
Sbjct:   191 ESYRKIASSIGCST-SNILFLTDVTVEASAAEAADVHVAVVVRPGNAGLTDDEKTYYRLI 249

Query:   521 NSFAEI 526
              SF E+
Sbjct:   250 TSFGEL 255

GO:0043874 "acireductone synthase activity" evidence=IEA

GO:0019509 "L-methionine salvage from methylthioadenosine" evidence=IEA

GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

RGD|1309016 Enoph1 "enolase-phosphatase 1" [Rattus norvegicus (taxid:10116)]

 Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
 Identities = 113/243 (46%), Positives = 163/243 (67%)

Query:   287 IVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVA 346
             I+LDIEGTTTPI+FV ++LFPY ++NV ++L   ++  E Q D+ LLR Q E+D    + 
Sbjct:    13 ILLDIEGTTTPIAFVKDILFPYIKENVKEYLQTHWEEEECQQDVSLLRKQAEEDAH--LD 70

Query:   347 GAVPIPPGDAGK-EEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFD 405
             GAVPIP    G  +++I A+V NV   +  DRK TALKQLQGH+W+  F +  ++ EVF 
Sbjct:    71 GAVPIPVASGGDVQQMIQAVVDNVSWQMSHDRKTTALKQLQGHMWKAAFTAGRMKAEVFA 130

Query:   406 DVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSY 465
             DV  A+ +W   G KVYIYSSGS  AQ+L+FG+S  GD+ + + G FDT +G+K E+ SY
Sbjct:   131 DVVPAVRRWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELIDGHFDTKIGHKVESDSY 190

Query:   466 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG--FKTINSF 523
              +I +S+G    + ILF+TDV  EA+AA+ A + V + +RPGN  L ++    +  I+SF
Sbjct:   191 RKIADSIGCST-NNILFLTDVTVEASAAEEADVHVAVVVRPGNAGLTDDEKTYYNLISSF 249

Query:   524 AEI 526
             +E+
Sbjct:   250 SEL 252

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA

GO:0019509 "L-methionine salvage from methylthioadenosine" evidence=IEA;ISO;ISS

GO:0043874 "acireductone synthase activity" evidence=ISO;ISS

UNIPROTKB|Q28C69 enoph1 "Enolase-phosphatase E1" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
 Identities = 119/244 (48%), Positives = 160/244 (65%)

Query:   287 IVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVA 346
             I+LDIEGTTTPI+FV +VLFPY ++N+ K+L   +   E Q+D+  L+ Q E D    + 
Sbjct:    13 ILLDIEGTTTPITFVKDVLFPYVKENIKKYLLEHWQEKECQEDVTQLQKQAEKD--SHLD 70

Query:   347 GAVPIPPG--DAGKEEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVF 404
             G VPIP G  D   E +I A+V NV   +  DRK TALKQLQGH+WR+ + S +L+GEV+
Sbjct:    71 GFVPIPSGVSDNTTEHMIQAVVDNVYWQMSFDRKTTALKQLQGHMWRSAYISGQLKGEVY 130

Query:   405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPS 464
             +DV  ++ +W  LG K+YIYSSGS  AQ+L+FG S  GDL K L G FDT +G+K E+ S
Sbjct:   131 EDVVPSIRQWRELGIKLYIYSSGSIDAQKLLFGYSIEGDLLKLLDGHFDTNIGHKVESKS 190

Query:   465 YVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKT--INS 522
             Y  I +++G   P  ILF+TDV +EA AA+ AGL V + +RPGN  L +        I S
Sbjct:   191 YRNIADNIGC-LPENILFLTDVVKEALAAEKAGLHVAVVVRPGNAALTDEDKSNCCCITS 249

Query:   523 FAEI 526
             F +I
Sbjct:   250 FHQI 253

GO:0019509 "L-methionine salvage from methylthioadenosine" evidence=ISS

GO:0043874 "acireductone synthase activity" evidence=ISS

UNIPROTKB|Q9UHY7 ENOPH1 "Enolase-phosphatase E1" [Homo sapiens (taxid:9606)]

 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 113/246 (45%), Positives = 160/246 (65%)

Query:   287 IVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVA 346
             I+LDIEGTTTPI+FV ++LFPY  +NV ++L   ++  E Q D+ LLR Q E+D    + 
Sbjct:    13 ILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDAH--LD 70

Query:   347 GAVPIPPGDAGK----EEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGE 402
             GAVPIP          +++I A+V NV   +  DRK TALKQLQGH+WR  F +  ++ E
Sbjct:    71 GAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMKAE 130

Query:   403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRET 462
              F DV  A+ KW   G KVYIYSSGS  AQ+L+FG+S  GD+ + + G FDT +G+K E+
Sbjct:   131 FFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVES 190

Query:   463 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG--FKTI 520
              SY +I +S+G    + ILF+TDV +EA+AA+ A + V + +RPGN  L ++    +  I
Sbjct:   191 ESYRKIADSIGCST-NNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 249

Query:   521 NSFAEI 526
              SF+E+
Sbjct:   250 TSFSEL 255

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0019509 "L-methionine salvage from methylthioadenosine" evidence=IEA;IDA;TAS

GO:0005575 "cellular_component" evidence=ND

GO:0043874 "acireductone synthase activity" evidence=IDA;TAS

GO:0000096 "sulfur amino acid metabolic process" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006595 "polyamine metabolic process" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

MGI|MGI:1915120 Enoph1 "enolase-phosphatase 1" [Mus musculus (taxid:10090)]

 Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
 Identities = 111/243 (45%), Positives = 160/243 (65%)

Query:   287 IVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVA 346
             I+LDIEGTTTPI+FV +VLFPY ++NV ++L   ++  E Q D+ LLR Q E+D    + 
Sbjct:    13 ILLDIEGTTTPIAFVKDVLFPYIKENVKEYLQTHWEEEECQQDVSLLRKQAEEDAH--LD 70

Query:   347 GAVPIPPGDAGK-EEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFD 405
             GAVPIP       +++I A+V NV   +  DRK TALKQLQGH+W+  F +  ++ E F 
Sbjct:    71 GAVPIPVASGSDLQQMIQAVVDNVYWQMSHDRKTTALKQLQGHMWKAAFTAGRMKAEFFA 130

Query:   406 DVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSY 465
             DV  A+ +W   G KVYIYSSGS  AQ+L+FG+S  GD+ + + G FDT +G+K ++ SY
Sbjct:   131 DVVPAVRRWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELIDGHFDTKIGHKVDSESY 190

Query:   466 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG--FKTINSF 523
              +I +S+G    + ILF+TDV  EA+AA+ A + V + +RPGN  L ++    +  I SF
Sbjct:   191 RKIADSIGCST-NNILFLTDVTVEASAAEEADVHVAVVVRPGNAGLTDDEKTYYNLITSF 249

Query:   524 AEI 526
             +E+
Sbjct:   250 SEL 252

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008652 "cellular amino acid biosynthetic process" evidence=IEA

GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA

GO:0009086 "methionine biosynthetic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0019509 "L-methionine salvage from methylthioadenosine" evidence=ISO

GO:0043874 "acireductone synthase activity" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|E2QU97 ENOPH1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
 Identities = 112/246 (45%), Positives = 160/246 (65%)

Query:   287 IVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVA 346
             I+LD+EGTTT  +F  ++LFPY ++NV ++L   ++  E Q D+ LLR Q E+D    + 
Sbjct:    12 ILLDVEGTTTKDNFSEDILFPYIKENVKEYLQTHWEEEECQQDVSLLRKQAEED--SHLD 69

Query:   347 GAVPIPP--GDAGKE--EVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGE 402
             GAVPIP   G+   +  ++I A+V NV   +  DRK TALKQLQGH+WR  F +  ++ E
Sbjct:    70 GAVPIPAASGNGADDLPQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFAAGRMKAE 129

Query:   403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRET 462
              F+DV  A+ KW   G KVYIYSSGS  AQ+L+FG+S  GDL + + G FDT +G+K E+
Sbjct:   130 FFEDVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDLLELVDGHFDTKIGHKVES 189

Query:   463 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG--FKTI 520
              SY +I NS+G    + ILF+TDV  EA+AA+ A + V + +RPGN  L ++    +  I
Sbjct:   190 ESYRKIANSIGCST-NNILFLTDVTLEASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 248

Query:   521 NSFAEI 526
              SF+E+
Sbjct:   249 TSFSEL 254

GO:0043874 "acireductone synthase activity" evidence=IEA

GO:0019509 "L-methionine salvage from methylthioadenosine" evidence=IEA

GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

UNIPROTKB|Q0VCJ2 APIP "Methylthioribulose-1-phosphate dehydratase" [Bos taurus (taxid:9913)]

 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 111/219 (50%), Positives = 141/219 (64%)

Query:    31 RVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVL 90
             R LI ELC+ FY LGWV+GTGG I++K H + I        ++PSGVQKER++PEDM+V 
Sbjct:    25 RYLIPELCKQFYHLGWVTGTGGGISLK-HGNEI-------YIAPSGVQKERIQPEDMFVC 76

Query:    91 SGNGTTLXXXXXXXXXXXXXXCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSK 150
               N   +               S C PLFM AY  R+AGAVIH+H   + + T++ P  K
Sbjct:    77 DINEKDISGPPPSKNLKK----SQCTPLFMNAYTMREAGAVIHTHSKAAVMATLVFP-GK 131

Query:   151 EFRITHMEMIKGIK---GHGYY---DELVVPIIENTAYENELTDSLAKAIDAYPKATAVL 204
             EF+ITH EMIKGIK     GYY   D LVVPIIENT  E +L + +A+A++ YP + AVL
Sbjct:   132 EFKITHQEMIKGIKKCTSGGYYRYDDMLVVPIIENTPEEKDLKERMARAVNDYPDSCAVL 191

Query:   205 VRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 243
             VR HG+YVWG++W  AKT  ECY YLFD A+ + Q GLD
Sbjct:   192 VRRHGVYVWGETWEKAKTMCECYDYLFDVAVSMKQAGLD 230

GO:0070372 "regulation of ERK1 and ERK2 cascade" evidence=ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISS

GO:0019509 "L-methionine salvage from methylthioadenosine" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0046570 "methylthioribulose 1-phosphate dehydratase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FN41	MTBC_ARATH	3, ., 1, ., 3, ., 7, 7	0.7598	0.9410	0.9763	yes	no
B9N1F9	MTBC_POPTR	3, ., 1, ., 3, ., 7, 7	0.8194	0.9562	0.9980	yes	no
E0CTF3	MTBC2_VITVI	3, ., 1, ., 3, ., 7, 7	0.7370	0.9885	0.9792	no	no
B4G0F3	MTBC_MAIZE	3, ., 1, ., 3, ., 7, 7	0.6841	0.9657	0.9825	N/A	no
E0CSI1	MTBC1_VITVI	3, ., 1, ., 3, ., 7, 7	0.7870	0.9828	1.0	yes	no
A9RBS1	MTBC_PHYPA	3, ., 1, ., 3, ., 7, 7	0.648	0.9220	0.9603	N/A	no
B9SQI7	MTBC_RICCO	3, ., 1, ., 3, ., 7, 7	0.825	0.9809	0.9791	N/A	no
C6JS30	MTBC_SORBI	3, ., 1, ., 3, ., 7, 7	0.6899	0.9657	0.9825	N/A	no
B8BKI7	MTBC_ORYSI	3, ., 1, ., 3, ., 7, 7	0.7162	0.9581	0.9729	N/A	no
Q2R483	MTBC_ORYSJ	3, ., 1, ., 3, ., 7, 7	0.7201	0.9581	0.9729	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	0.691
4th Layer	4.2.1.109	LOW CONFIDENCE prediction!
3rd Layer	4.2.1	LOW CONFIDENCE prediction!
3rd Layer	3.1.3.77	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	526
TIGR03328	193	TIGR03328, salvage_mtnB, methylthioribulose-1-phos	2e-82
COG4229	229	COG4229, COG4229, Predicted enolase-phosphatase [E	2e-70
TIGR01691	220	TIGR01691, enolase-ppase, 2,3-diketo-5-methylthio-	9e-68
smart01007	185	smart01007, Aldolase_II, Class II Aldolase and Add	1e-37
pfam00596	181	pfam00596, Aldolase_II, Class II Aldolase and Addu	1e-34
COG0235	219	COG0235, AraD, Ribulose-5-phosphate 4-epimerase an	6e-32
PRK06754	208	PRK06754, mtnB, methylthioribulose-1-phosphate deh	5e-29
cd00398	209	cd00398, Aldolase_II, Class II Aldolase and Adduci	8e-21
pfam13419	176	pfam13419, HAD_2, Haloacid dehalogenase-like hydro	5e-18
PRK09220	204	PRK09220, PRK09220, methylthioribulose-1-phosphate	1e-15
TIGR01549	162	TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup	3e-15
PRK06833	214	PRK06833, PRK06833, L-fuculose phosphate aldolase;	7e-08
pfam00702	187	pfam00702, Hydrolase, haloacid dehalogenase-like h	7e-07
PRK08130	213	PRK08130, PRK08130, putative aldolase; Validated	2e-06
COG0546	220	COG0546, Gph, Predicted phosphatases [General func	5e-06
PRK06755	209	PRK06755, PRK06755, hypothetical protein; Validate	7e-06
TIGR01086	214	TIGR01086, fucA, L-fuculose phosphate aldolase	3e-05
PRK08087	215	PRK08087, PRK08087, L-fuculose phosphate aldolase;	5e-05
PRK06557	221	PRK06557, PRK06557, L-ribulose-5-phosphate 4-epime	5e-04
TIGR01428	198	TIGR01428, HAD_type_II, 2-haloalkanoic acid dehalo	0.004

>gnl|CDD|234168 TIGR03328, salvage_mtnB, methylthioribulose-1-phosphate dehydratase

 Score =  254 bits (650), Expect = 2e-82
 Identities = 71/209 (33%), Positives = 107/209 (51%), Gaps = 18/209 (8%)

Query: 34  ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN 93
           + E  R  Y  GWV GTGG++       S    +  IL++PSGV K R+ PED  V+   
Sbjct: 1   LIEAGRDLYKRGWVPGTGGNL-------SARLDEDEILITPSGVDKGRLTPEDFLVVDLQ 53

Query: 94  GTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEF 152
           G  +S           P  S    L  + Y     AGAV+H+H +E+ +++ + P +  F
Sbjct: 54  GKPVSGG-------LKP--SAETLLHTQLYRLTPGAGAVLHTHSVEATVLSRLYPSNGAF 104

Query: 153 RITHMEMIKGIKG-HGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIY 211
            +   EM+K + G   + D+L +PI ENT     L DS+A  ++AYP    VL+R HG+Y
Sbjct: 105 ELEGYEMLKALPGITTHEDKLTIPIFENTQDIARLADSVAPYLEAYPDVPGVLIRGHGLY 164

Query: 212 VWGDSWINAKTQAECYHYLFDAAIKLHQL 240
            WG  W  AK   E   +LF+  +++ +L
Sbjct: 165 AWGRDWEEAKRHLEALEFLFECELEMLKL 193

Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine [Amino acid biosynthesis, Aspartate family]. Length = 193

>gnl|CDD|226682 COG4229, COG4229, Predicted enolase-phosphatase [Energy production and conversion]

 Score =  224 bits (573), Expect = 2e-70
 Identities = 98/241 (40%), Positives = 139/241 (57%), Gaps = 20/241 (8%)

Query: 284 PRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQ 343
            + I+LDIEGT +PISFV +VLFPYA   +   +    + +E    +K +  +V  +   
Sbjct: 4   VKAILLDIEGTVSPISFVKDVLFPYAARKLPDFVRENTEDSE----VKKIVDEVLSEF-- 57

Query: 344 GVAGAVPIPPGDAGKEEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEV 403
                        G      ALVA +   I  D K T LK LQG IW  G+ES EL+  +
Sbjct: 58  -------------GIANSEEALVALLLEWIAEDSKDTPLKALQGMIWAHGYESGELKAHL 104

Query: 404 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETP 463
           + D  +A+++W +LG +VYIYSSGS  AQ+L FG+S+ GDL    SG+FDT +G KRE+ 
Sbjct: 105 YPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQ 164

Query: 464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSF 523
           SY +I   +G+  P+EILF++D  +E  AA   GL   +++RPGN P+P+  GF    SF
Sbjct: 165 SYAKIAGDIGL-PPAEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPDGQGFLVYKSF 223

Query: 524 A 524
            
Sbjct: 224 E 224

Length = 229

>gnl|CDD|233533 TIGR01691, enolase-ppase, 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

 Score =  217 bits (554), Expect = 9e-68
 Identities = 96/239 (40%), Positives = 128/239 (53%), Gaps = 26/239 (10%)

Query: 285 RCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQG 344
           + ++LDIEGTT  ISFV +VLFPYA   +                   +    E  + + 
Sbjct: 2   KNVLLDIEGTTGSISFVHDVLFPYAASRLES----------------FVNDNYESTIVEN 45

Query: 345 VAGAVPIPPGDAGKEEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVF 404
           +      P        ++  L A +D     DRK T LK LQG IWR G+ES EL   ++
Sbjct: 46  LRELGKTPEE----LILLRKLHAEMDK----DRKATPLKTLQGLIWRQGYESGELTSHLY 97

Query: 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPS 464
            DVP ALE W  LG ++ +YSSGS  AQ+L+FG+S+ G+L  Y SG+FDT VG K E  S
Sbjct: 98  PDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQS 157

Query: 465 YVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSF 523
           YV+I   LG   P EILF++D+  E  AA+ AGL     +RPGN P+ +   F     F
Sbjct: 158 YVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTGQLVRPGNDPVVDP-SFPVYPQF 214

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities [Central intermediary metabolism, Sulfur metabolism]. Length = 220

>gnl|CDD|214970 smart01007, Aldolase_II, Class II Aldolase and Adducin N-terminal domain

 Score =  136 bits (344), Expect = 1e-37
 Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 21/204 (10%)

Query: 34  ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN 93
           ++  CR     G V GTGG+I+ +V ++       L L++PSGV    +   D+ V+  +
Sbjct: 1   LAAACRLLARRGLVEGTGGNISARVGEE------DLFLITPSGVDFGELTASDLVVVDLD 54

Query: 94  GTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEF 152
           G  +            PK S   PL +  Y  R D GAV+H+H   +  +     + K  
Sbjct: 55  GNVV-------EGGGGPKPSSETPLHLAIYRARPDVGAVVHTHSPYATALAA---LGKPL 104

Query: 153 RITHMEMIKGI-KGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIY 211
            +   E       G   Y     P  E      EL ++LA+A+   P   AVL+RNHG+ 
Sbjct: 105 PLLPTEQAAAFLGGEIPYAPYAGPGTELAEEGAELAEALAEALPDRP---AVLLRNHGLL 161

Query: 212 VWGDSWINAKTQAECYHYLFDAAI 235
           VWG +   A   AE      +  +
Sbjct: 162 VWGKTLEEAFDLAEELEEAAEIQL 185

This family includes class II aldolases and adducins which have not been ascribed any enzymatic function. Length = 185

>gnl|CDD|216015 pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain

 Score =  128 bits (324), Expect = 1e-34
 Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 27/204 (13%)

Query: 34  ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN 93
           ++  CR     G V GTGG+I+ +  D          L++PSGV    +  ED+ V+  +
Sbjct: 3   LAAACRLLARRGLVEGTGGNISARDPD--------HFLITPSGVDFGELTAEDLVVVDLD 54

Query: 94  GTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEF 152
           G  +        P      S   PL    Y  R D GAV+H+H   +  ++ +       
Sbjct: 55  GNVVEGGEGGGKP------SSETPLHAAIYRARPDVGAVVHTHSPYATALSALKEGLPPI 108

Query: 153 RITHMEMIKGIKGHGYYDELVVPIIENTAY-ENELTDSLAKAIDAYPKATAVLVRNHGIY 211
                    G +         +P++        EL + LA+A+       AVL+RNHG+ 
Sbjct: 109 TQEAAAFYLGGE---------IPVVPYYRPGTEELGERLAEALGG--DRKAVLLRNHGLL 157

Query: 212 VWGDSWINAKTQAECYHYLFDAAI 235
           VWG +   A  +AE      +  +
Sbjct: 158 VWGKTLEEAFDRAEVLERAAEIQL 181

This family includes class II aldolases and adducins which have not been ascribed any enzymatic function. Length = 181

>gnl|CDD|223313 COG0235, AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism]

 Score =  122 bits (307), Expect = 6e-32
 Identities = 51/216 (23%), Positives = 87/216 (40%), Gaps = 26/216 (12%)

Query: 28  KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDM 87
           ++ R  +++  R     G V GT G+I++++ +        L L++PSGV    +  +D+
Sbjct: 6   EKLRQELAKAARLLARRGLVEGTAGNISVRLPEG------GLFLITPSGVPFGELTADDL 59

Query: 88  YVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMIN 146
            V+  +G  +          KP   +   P+ +  Y  R DAGAV+H+H   +  ++ + 
Sbjct: 60  VVVDLDGEVVEGG------KKPSSET---PIHLAIYRARPDAGAVVHTHSPYATALSTLG 110

Query: 147 PMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVR 206
              +       E +K   G         P     A        LA+A+         L+R
Sbjct: 111 ---EPLPPLGTEHLKYFGGGIPCAPYAGPGSVELAEALAEAADLAEAV-------LKLLR 160

Query: 207 NHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL 242
           NHG+  WG +   A   AE    L    +K   LG 
Sbjct: 161 NHGVVAWGKTLAEAVHLAEVLEELAKLQLKALSLGK 196

Length = 219

>gnl|CDD|180679 PRK06754, mtnB, methylthioribulose-1-phosphate dehydratase; Reviewed

 Score =  113 bits (285), Expect = 5e-29
 Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 21/211 (9%)

Query: 34  ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN 93
           ++E+ +      W   T G+++IKV DD +       L++ SG  K +  PED  ++  +
Sbjct: 11  LAEIKKELAARDWFPATSGNLSIKVSDDPL-----TFLVTASGKDKRKTTPEDFLLVDHD 65

Query: 94  GTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFR 153
           G  +     KP        S    L    Y   +AG V+H H +++ +++ +        
Sbjct: 66  GKPVEETELKP--------SAETLLHTHIYNNTNAGCVLHVHTVDNNVISELYGDDGAVT 117

Query: 154 ITHMEMIKGIKGHGYYDE---LVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGI 210
               E+IK +   G ++E   + +PIIEN A    L +  AK I     + AVL+RNHGI
Sbjct: 118 FQGQEIIKAL---GIWEENAEIHIPIIENHADIPTLAEEFAKHIQ--GDSGAVLIRNHGI 172

Query: 211 YVWGDSWINAKTQAECYHYLFDAAIKLHQLG 241
            VWG     AK   E Y +LF   IKL  + 
Sbjct: 173 TVWGRDAFEAKKHLEAYEFLFSYHIKLLSIQ 203

Length = 208

>gnl|CDD|238232 cd00398, Aldolase_II, Class II Aldolase and Adducin head (N-terminal) domain

 Score = 90.5 bits (225), Expect = 8e-21
 Identities = 52/219 (23%), Positives = 83/219 (37%), Gaps = 32/219 (14%)

Query: 34  ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN 93
           I   C      GWV+GTGG+++ +  D          L++PSGV  E M   D+ V+   
Sbjct: 7   IIAACLLLDLYGWVTGTGGNVSARDRDR------GYFLITPSGVDYEEMTASDLVVVDAQ 60

Query: 94  GTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEF 152
           G  +    P          S   PL +  Y  R D G ++H+H   S   T ++ + +  
Sbjct: 61  GKVVEGKKP----------SSETPLHLALYRARPDIGCIVHTH---STHATAVSQLKEG- 106

Query: 153 RITHMEMIKGIKGHGYYDELVVPIIENTA---YENELTDSLAKAIDAYPKATAVLVRNHG 209
                 +  G      Y    +P          E+E+    A      P + AVL+RNHG
Sbjct: 107 -----LIPAGHTACAVYFTGDIPCTPYMTPETGEDEIGTQRALGF---PNSKAVLLRNHG 158

Query: 210 IYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPN 248
           ++ WG +   A   A       +  +K   +G      +
Sbjct: 159 LFAWGPTLDEAFHLAVVLEVAAEIQLKALSMGGQLPPIS 197

Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations. Length = 209

>gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase

 Score = 81.2 bits (201), Expect = 5e-18
 Identities = 51/217 (23%), Positives = 80/217 (36%), Gaps = 45/217 (20%)

Query: 287 IVLDIEGTTTPISFVS-EVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGV 345
           I+ D++GT      V  E L   A + +G  +S                    ++L++  
Sbjct: 1   IIFDLDGTLIDFDPVIFEALRDLAAERLGLDIS-------------------AEELRE-- 39

Query: 346 AGAVPIPPGDAGKEEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELE-GEVF 404
                   G    +E +A L+                      I     E N     E F
Sbjct: 40  -------AGGLPFDEALADLLRE-------------HPIDPDEILEALLEYNLESRLEPF 79

Query: 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPS 464
            DV E L +  + G K+ I S+GSR A   +       DL   +    D     K +  +
Sbjct: 80  PDVVELLRRLKAKGVKLVILSNGSREAVERLLEKLGLLDLFDAVFTSDDVGAR-KPDPEA 138

Query: 465 YVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 501
           Y  +   LG+  P EILF+ D  ++  AA+AAG++ V
Sbjct: 139 YERVLERLGLP-PEEILFIDDSPEDLEAARAAGIKTV 174

Length = 176

>gnl|CDD|236415 PRK09220, PRK09220, methylthioribulose-1-phosphate dehydratase; Provisional

 Score = 75.4 bits (186), Expect = 1e-15
 Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 31/216 (14%)

Query: 33  LISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPED-MYV-L 90
            +    R     GWV  T G++++++ +           ++ SG  K  +  ED + V +
Sbjct: 9   QLIAAGRWIGARGWVPATSGNMSVRLDEQHC-------AITVSGKDKGSLTAEDFLQVDI 61

Query: 91  SGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMS 149
           +GN          P   KP   S    L  + Y    + GAV+H+H + + +++ +   S
Sbjct: 62  AGN--------AVPSGRKP---SAETLLHTQLYRLFPEIGAVLHTHSVNATVLSRVEK-S 109

Query: 150 KEFRITHMEMIKGIKG-HGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAV----L 204
               +   E+ K   G   +   +VVPI +N     +    LA  +  Y  A  +    L
Sbjct: 110 DALVLEGYELQKAFAGQTTHETAVVVPIFDND----QDIARLAARVAPYLDAQPLRYGYL 165

Query: 205 VRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL 240
           +R HG+Y WG     A+   E   +LF+  ++   L
Sbjct: 166 IRGHGLYCWGRDMAEARRHLEGLEFLFECELERRLL 201

Length = 204

>gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

 Score = 73.2 bits (180), Expect = 3e-15
 Identities = 49/212 (23%), Positives = 72/212 (33%), Gaps = 52/212 (24%)

Query: 287 IVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVA 346
           I+ DI+GT   I F     F    +                  +K LR   E+ L     
Sbjct: 2   ILFDIDGTLVDIKFAIRRAFAQTFEEF-------GLNPAAFKRLKALRGLAEELLW---- 50

Query: 347 GAVPIPPGDAGKEEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDD 406
                                             AL++LQGHI   G+++ E        
Sbjct: 51  -----------------------------RIATEALEELQGHI---GYDAEEAY---IPG 75

Query: 407 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSY 465
             + L +    G K+ I S+GS  AQ+L+        L  Y         +G+K E   +
Sbjct: 76  AADLLPRLKEAGIKLGIISNGSLRAQKLLLR---KHGLGDYFELILGSDEIGSKPEPEIF 132

Query: 466 VEITNSLGVDKPSEILFVTDVYQEATAAKAAG 497
           +    SLGV  P E+L V D   +   A+ AG
Sbjct: 133 LAALESLGV--PPEVLHVGDNLSDIKGARNAG 162

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162

>gnl|CDD|180717 PRK06833, PRK06833, L-fuculose phosphate aldolase; Provisional

 Score = 52.8 bits (127), Expect = 7e-08
 Identities = 49/203 (24%), Positives = 81/203 (39%), Gaps = 37/203 (18%)

Query: 28  KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDM 87
           ++ R  I    +   + G   GTGG+I+I   +      Q L+ ++PSG+    ++PED+
Sbjct: 4   QKEREEIVAYGKKLISSGLTKGTGGNISIFNRE------QGLMAITPSGIDYFEIKPEDI 57

Query: 88  YVLSGNGTTLSS---PSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVT 143
            ++  +G  +     PS +   H               Y  R D  A++H+H   S   T
Sbjct: 58  VIMDLDGKVVEGERKPSSELDMHL------------IFYRNREDINAIVHTH---SPYAT 102

Query: 144 MINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAK-AIDAYPKATA 202
            +  +  E    H           Y   +  P +    Y    T  LA+ A +A     A
Sbjct: 103 TLACLGWELPAVH-----------YLIAVAGPNVRCAEYATFGTKELAENAFEAMEDRRA 151

Query: 203 VLVRNHGIYVWGDSWINAKTQAE 225
           VL+ NHG+    ++  NA   AE
Sbjct: 152 VLLANHGLLAGANNLKNAFNIAE 174

Length = 214

>gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase

 Score = 49.2 bits (117), Expect = 7e-07
 Identities = 47/213 (22%), Positives = 72/213 (33%), Gaps = 27/213 (12%)

Query: 285 RCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQG 344
           + +V D++GT T       V    A       L V    A  ++  K  R ++   L   
Sbjct: 2   KAVVFDLDGTLT--DGEPVVPEAEALLEAAAALGVAIVIAAGENLTKEGREELVRRL--- 56

Query: 345 VAGAVPIPPGDAGKEEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVF 404
                 +    AG+E +   L A    +   D  +                   L   ++
Sbjct: 57  ------LLRALAGEELLEELLRAGATVVAVLDLVV--------------LGLIALTDPLY 96

Query: 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPS 464
               EAL++    G K+ I +  +RL    I       D       +    VG K +   
Sbjct: 97  PGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDALVSADLYGLVGVG-KPDPKI 155

Query: 465 YVEITNSLGVDKPSEILFVTDVYQEATAAKAAG 497
           +      LGV  P E+L V D   +  AAKAAG
Sbjct: 156 FELALEELGVK-PEEVLMVGDGVNDIPAAKAAG 187

This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187

>gnl|CDD|181241 PRK08130, PRK08130, putative aldolase; Validated

 Score = 48.3 bits (116), Expect = 2e-06
 Identities = 49/210 (23%), Positives = 79/210 (37%), Gaps = 54/210 (25%)

Query: 31  RVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVL 90
           R  I  L R  +  G+  G+ G+I+ ++ D          L++P+G    R++P  +  +
Sbjct: 7   REEIVRLGRSLFQRGYTVGSAGNISARLDDGG-------WLVTPTGSCLGRLDPARLSKV 59

Query: 91  SGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTM----- 144
             +G  LS         KP K     PL    Y    + GAV+H H      ++      
Sbjct: 60  DADGNWLSG-------DKPSKEV---PLHRAIYRNNPECGAVVHLHSTHLTALSCLGGLD 109

Query: 145 ----INPMSKEF--RITHMEMIKGIKGHGYY---DELVVPIIENTAYENELTDSLAKAID 195
               + P +  +  R+ H+ +I       YY   D               + ++LA    
Sbjct: 110 PTNVLPPFTPYYVMRVGHVPLIP------YYRPGDP-------------AIAEALAGLA- 149

Query: 196 AYPKATAVLVRNHGIYVWGDSWINAKTQAE 225
              +  AVL+ NHG  VWG S   A    E
Sbjct: 150 --ARYRAVLLANHGPVVWGSSLEAAVNATE 177

Length = 213

>gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only]

 Score = 47.1 bits (112), Expect = 5e-06
 Identities = 39/139 (28%), Positives = 56/139 (40%), Gaps = 20/139 (14%)

Query: 398 ELEGEVFDDVPEALEKWHSLGTKVYIYSS-GSRLAQRLIFGNSNYGDLRKYLSGFFDTAV 456
            LE  +F  V E L    S G K+ I ++   R    L+      G     L+ +FD  V
Sbjct: 85  LLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILL---KALG-----LADYFDVIV 136

Query: 457 G-----NKRETPSYV-EITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGP 510
           G       +  P  +  +   LG+D P E L V D   +  AAKAAG+   + +  G   
Sbjct: 137 GGDDVPPPKPDPEPLLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGV-PAVGVTWGYNS 194

Query: 511 --LPENHGFK-TINSFAEI 526
                  G    I+S AE+
Sbjct: 195 REELAQAGADVVIDSLAEL 213

Length = 220

>gnl|CDD|102532 PRK06755, PRK06755, hypothetical protein; Validated

 Score = 46.9 bits (111), Expect = 7e-06
 Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 11/124 (8%)

Query: 119 FMKA--YEKRDAGAVIHSHGIESCLVTMINPMSKE--FRITHMEMIKGIKGHGYYDELVV 174
           FM A  Y+K  A  ++    ++S L++ +     E  F    +E + G +G     E+ +
Sbjct: 81  FMHADIYKKSSAECILQVQTVDSHLISELYGEEGEVTFDKRSVERVFGKEG---ITEMTI 137

Query: 175 PIIENTAYENELTDSLAKAIDAYPK-ATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDA 233
           PI+E+   E +  D L   +  + +    VLV N+G+ VWG +   AK   E   YL + 
Sbjct: 138 PIVED---EKKFADLLENNVPNFIEGGGVVLVHNYGMIVWGKTPEEAKKWLEGIEYLMNY 194

Query: 234 AIKL 237
            +KL
Sbjct: 195 HVKL 198

Length = 209

>gnl|CDD|188107 TIGR01086, fucA, L-fuculose phosphate aldolase

 Score = 44.9 bits (106), Expect = 3e-05
 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 21/115 (18%)

Query: 34  ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN 93
           I + C     LG   GT G+++++  D         +L++P+G+  E++  E +  + GN
Sbjct: 9   IIDTCLEMTRLGLNQGTAGNVSVRYKDG--------MLITPTGIPYEKLTTEHIVYVDGN 60

Query: 94  GTTLSSPSPKPYPHKPPKCSDCAPLF-MKAYEKR-DAGAVIHSHGIESCLVTMIN 146
           G            H+  K       F +  Y+ R DA AV+H+H I    V+++N
Sbjct: 61  GK-----------HEEGKLPSSEWQFHLSVYQTRPDANAVVHNHAIHCAAVSILN 104

Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation but scoring below the trusted cutoff may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version [Energy metabolism, Sugars]. Length = 214

>gnl|CDD|181226 PRK08087, PRK08087, L-fuculose phosphate aldolase; Provisional

 Score = 44.3 bits (105), Expect = 5e-05
 Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 19/114 (16%)

Query: 34  ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN 93
           I + C     LG   GT G+++++  D         +L++P+G+  E++    +  + GN
Sbjct: 10  IIDTCLEMTRLGLNQGTAGNVSVRYQDG--------MLITPTGIPYEKLTESHIVFVDGN 61

Query: 94  GTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMIN 146
           G        K    K P  S      M AY+ R DA AV+H+H +    V+++N
Sbjct: 62  G--------KHEEGKLP--SSEWRFHMAAYQTRPDANAVVHNHAVHCTAVSILN 105

Length = 215

>gnl|CDD|235829 PRK06557, PRK06557, L-ribulose-5-phosphate 4-epimerase; Validated

 Score = 41.1 bits (97), Expect = 5e-04
 Identities = 46/211 (21%), Positives = 80/211 (37%), Gaps = 64/211 (30%)

Query: 26  AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPE 85
            V++ R  + +L       G V  T G+++ +           L+++ PSGV  + + PE
Sbjct: 7   MVEKLREEVCKLHLELPKYGLVVWTSGNVSARDPGTD------LVVIKPSGVSYDDLTPE 60

Query: 86  DMYVLSGNGTTLS---SPSPKPYPHKPPKCSDCAPLFMKAYEKR---DAGAVIHSHGIES 139
           DM V+  +G  +     PS           SD A      Y  R   D G V+H+H   +
Sbjct: 61  DMVVVDLDGNVVEGDLKPS-----------SDTAS---HLYVYRHMPDVGGVVHTHSTYA 106

Query: 140 -----------CLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTD 188
                      C++T    M+ EF            G        +P+     +     +
Sbjct: 107 TAWAARGEPIPCVLTA---MADEF-----------GGP-------IPV---GPFALIGDE 142

Query: 189 SLAKAID---AYPKATAVLVRNHGIYVWGDS 216
           ++ K I       ++ AVL++NHG++  G  
Sbjct: 143 AIGKGIVETLKGGRSPAVLMQNHGVFTIGKD 173

Length = 221

>gnl|CDD|130495 TIGR01428, HAD_type_II, 2-haloalkanoic acid dehalogenase, type II

 Score = 38.5 bits (90), Expect = 0.004
 Identities = 32/115 (27%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD---TAVGN 458
               DVP  L      G ++ I S+GS     L     + G     L   FD   +A   
Sbjct: 92  PPHPDVPAGLRALKERGYRLAILSNGS--PAMLKSLVKHAG-----LDDPFDAVLSADAV 144

Query: 459 KRETPS---YVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGP 510
           +   P+   Y     +LGV  P E+LFV     +   AK  G +     RPG  P
Sbjct: 145 RAYKPAPQVYQLALEALGVP-PDEVLFVASNPWDLGGAKKFGFKTAWVNRPGEPP 198

Catalyzes the hydrolytic dehalogenation of small L-2-haloalkanoic acids to yield the corresponding D-2-hydroxyalkanoic acids. Belongs to the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), class (subfamily) I. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. Length = 198

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	526
PRK06833	214	L-fuculose phosphate aldolase; Provisional	100.0
PRK08087	215	L-fuculose phosphate aldolase; Provisional	100.0
PRK05874	217	L-fuculose-phosphate aldolase; Validated	100.0
PRK13213	231	araD L-ribulose-5-phosphate 4-epimerase; Reviewed	100.0
PRK12348	228	sgaE L-ribulose-5-phosphate 4-epimerase; Reviewed	100.0
PRK08193	231	araD L-ribulose-5-phosphate 4-epimerase; Reviewed	100.0
PRK07490	245	hypothetical protein; Provisional	100.0
TIGR00760	231	araD L-ribulose-5-phosphate 4-epimerase. The homol	100.0
cd00398	209	Aldolase_II Class II Aldolase and Adducin head (N-	100.0
PRK05834	194	hypothetical protein; Provisional	100.0
PRK12347	231	sgbE L-ribulose-5-phosphate 4-epimerase; Reviewed	100.0
PRK06755	209	hypothetical protein; Validated	100.0
PRK06557	221	L-ribulose-5-phosphate 4-epimerase; Validated	100.0
PRK06486	262	hypothetical protein; Provisional	100.0
PRK08130	213	putative aldolase; Validated	100.0
PRK06754	208	mtnB methylthioribulose-1-phosphate dehydratase; R	100.0
PRK13145	234	araD L-ribulose-5-phosphate 4-epimerase; Provision	100.0
TIGR01086	214	fucA L-fuculose phosphate aldolase. Members of thi	100.0
PRK06661	231	hypothetical protein; Provisional	100.0
PRK09220	204	methylthioribulose-1-phosphate dehydratase; Provis	100.0
PRK06357	216	hypothetical protein; Provisional	100.0
PRK07044	252	aldolase II superfamily protein; Provisional	100.0
PRK06208	274	hypothetical protein; Provisional	100.0
PRK07090	260	class II aldolase/adducin domain protein; Provisio	100.0
TIGR03328	193	salvage_mtnB methylthioribulose-1-phosphate dehydr	100.0
PRK08333	184	L-fuculose phosphate aldolase; Provisional	100.0
PRK08660	181	L-fuculose phosphate aldolase; Provisional	100.0
COG0235	219	AraD Ribulose-5-phosphate 4-epimerase and related	100.0
PRK03634	274	rhamnulose-1-phosphate aldolase; Provisional	100.0
TIGR02624	270	rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Mem	100.0
PF00596	184	Aldolase_II: Class II Aldolase and Adducin N-termi	100.0
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	100.0
KOG2631	238	consensus Class II aldolase/adducin N-terminal dom	100.0
COG4229	229	Predicted enolase-phosphatase [Energy production a	99.96
PRK08324	681	short chain dehydrogenase; Validated	99.95
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.95
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.95
COG0546	220	Gph Predicted phosphatases [General function predi	99.94
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.94
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.94
PRK13288	214	pyrophosphatase PpaX; Provisional	99.94
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.93
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.93
PRK11587	218	putative phosphatase; Provisional	99.93
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.93
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.93
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.93
PLN02575	381	haloacid dehalogenase-like hydrolase	99.93
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.93
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.93
PRK09449	224	dUMP phosphatase; Provisional	99.92
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.92
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.92
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.92
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.92
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.92
PLN02940	382	riboflavin kinase	99.91
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.91
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.91
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.91
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.91
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.9
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.9
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.9
KOG2630	254	consensus Enolase-phosphatase E-1 [Amino acid tran	99.89
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.89
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.89
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.89
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.88
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.88
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.88
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.87
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.87
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.86
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.86
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.86
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.85
PLN02811	220	hydrolase	99.83
PHA02597	197	30.2 hypothetical protein; Provisional	99.83
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.82
PRK06769	173	hypothetical protein; Validated	99.81
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.8
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.8
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.8
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	99.8
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	99.79
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.78
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.78
COG3347	404	Uncharacterized conserved protein [Function unknow	99.77
PLN02954	224	phosphoserine phosphatase	99.76
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	99.76
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.75
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.75
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.72
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.71
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	99.68
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	99.66
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.65
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.65
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.63
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	99.62
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.61
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.59
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	99.58
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	99.58
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	99.56
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	99.53
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	99.53
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	99.52
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	99.52
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	99.5
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	99.48
KOG3699	598	consensus Cytoskeletal protein Adducin [Signal tra	99.46
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	99.45
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	99.45
PRK10444	248	UMP phosphatase; Provisional	99.42
PHA02530	300	pseT polynucleotide kinase; Provisional	99.41
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.4
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	99.39
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	99.36
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	99.34
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.34
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	99.33
PLN02645	311	phosphoglycolate phosphatase	99.33
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	99.31
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	99.26
COG0241	181	HisB Histidinol phosphatase and related phosphatas	99.25
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	99.24
PTZ00445	219	p36-lilke protein; Provisional	99.22
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	99.19
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	99.18
PRK08238	479	hypothetical protein; Validated	99.15
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	99.1
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	99.01
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	99.0
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	98.99
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	98.98
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	98.97
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	98.94
PRK11590	211	hypothetical protein; Provisional	98.89
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	98.87
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	98.85
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	98.78
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	98.76
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	98.74
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	98.68
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	98.67
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	98.63
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	98.6
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	98.58
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	98.55
COG4996	164	Predicted phosphatase [General function prediction	98.49
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	98.47
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.44
PRK01158	230	phosphoglycolate phosphatase; Provisional	98.41
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.38
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	98.32
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	98.28
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	98.27
COG4359	220	Uncharacterized conserved protein [Function unknow	98.24
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	98.2
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	98.17
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	98.14
PRK10671	834	copA copper exporting ATPase; Provisional	98.12
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	98.05
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	97.94
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	97.89
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	97.86
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	97.83
KOG3699	598	consensus Cytoskeletal protein Adducin [Signal tra	97.82
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	97.79
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	97.77
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	97.72
COG3700	237	AphA Acid phosphatase (class B) [General function	97.62
PLN02645	311	phosphoglycolate phosphatase	97.53
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	97.51
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	97.5
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	97.3
COG4087	152	Soluble P-type ATPase [General function prediction	97.22
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	97.17
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	97.13
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	97.11
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	97.1
PRK10513	270	sugar phosphate phosphatase; Provisional	97.08
PRK10976	266	putative hydrolase; Provisional	96.99
COG2503	274	Predicted secreted acid phosphatase [General funct	96.93
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	96.92
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.9
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.76
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	96.76
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	96.7
PTZ00174	247	phosphomannomutase; Provisional	96.7
COG5663	194	Uncharacterized conserved protein [Function unknow	96.63
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	96.41
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	96.27
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	96.26
KOG2470	510	consensus Similar to IMP-GMP specific 5'-nucleotid	96.21
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	96.16
PLN02887	580	hydrolase family protein	96.08
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	96.01
PLN02177	497	glycerol-3-phosphate acyltransferase	95.93
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	95.9
PRK14010	673	potassium-transporting ATPase subunit B; Provision	95.89
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	95.68
PRK01122	679	potassium-transporting ATPase subunit B; Provision	95.67
PLN02423	245	phosphomannomutase	95.5
KOG2134	422	consensus Polynucleotide kinase 3' phosphatase [Re	95.47
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	95.3
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	95.21
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	95.05
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	95.03
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	95.02
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	95.0
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	94.85
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	94.76
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	94.52
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	94.4
KOG2961	190	consensus Predicted hydrolase (HAD superfamily) [G	94.37
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	94.35
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	94.32
COG5610	635	Predicted hydrolase (HAD superfamily) [General fun	94.2
PRK15122	903	magnesium-transporting ATPase; Provisional	93.95
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	93.88
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	93.83
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	93.73
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	93.59
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	93.56
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	92.92
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	92.02
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	91.48
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	89.97
PLN03017	366	trehalose-phosphatase	89.48
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	89.47
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	89.02
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	88.99
COG4030	315	Uncharacterized protein conserved in archaea [Func	88.47
PRK10513	270	sugar phosphate phosphatase; Provisional	88.37
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	88.2
TIGR01658	274	EYA-cons_domain eyes absent protein conserved doma	88.19
PLN02580	384	trehalose-phosphatase	88.19
PRK10976	266	putative hydrolase; Provisional	87.95
PF05822	246	UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter	87.58
PLN02151	354	trehalose-phosphatase	87.56
KOG2469	424	consensus IMP-GMP specific 5'-nucleotidase [Nucleo	87.49
PLN02499	498	glycerol-3-phosphate acyltransferase	87.3
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	87.1
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	87.03
PRK10444	248	UMP phosphatase; Provisional	86.74
KOG1618	389	consensus Predicted phosphatase [General function	86.51
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	86.36
KOG0202	972	consensus Ca2+ transporting ATPase [Inorganic ion	85.18
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	84.98
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	84.89
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	84.71
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	84.5
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	84.35
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	83.79
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	83.49
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	83.48
KOG3189	252	consensus Phosphomannomutase [Lipid transport and	83.4
PLN02887	580	hydrolase family protein	83.36
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	82.4
PF06189	264	5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103	81.85
KOG3128	298	consensus Uncharacterized conserved protein [Funct	80.95
COG4850	373	Uncharacterized conserved protein [Function unknow	80.67

>PRK06833 L-fuculose phosphate aldolase; Provisional

Probab=100.00  E-value=2.1e-44  Score=344.89  Aligned_cols=201  Identities=22%  Similarity=0.321  Sum_probs=175.3

Q ss_pred             HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCC
Q 009774           27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP  106 (526)
Q Consensus        27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~  106 (526)
                      .+++|++|+++||+++++||+.+++||||+|++++      +.|||||||.++++|+++||++||+||++++|. .+|  
T Consensus         3 ~~~~r~~i~~~~~~l~~~gl~~g~~GniS~r~~~~------~~~~ItpsG~~~~~l~~~div~vd~~g~~i~g~-~~p--   73 (214)
T PRK06833          3 LQKEREEIVAYGKKLISSGLTKGTGGNISIFNREQ------GLMAITPSGIDYFEIKPEDIVIMDLDGKVVEGE-RKP--   73 (214)
T ss_pred             hHHHHHHHHHHHHHHHHcCCCCCCCceEEEEeCCC------CEEEEcCCCCChhhCCHHHEEEEcCCCCCcCCC-CCC--
Confidence            45689999999999999999999999999999763      489999999999999999999999999999986 355  


Q ss_pred             CCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-CCch
Q 009774          107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYEN  184 (526)
Q Consensus       107 ~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~  184 (526)
                            |+|+.+|+.||++| |++||+|+||+|+++||+++.   ++|...+... .+++       .||+.+|. +++.
T Consensus        74 ------s~E~~lH~~iy~~rpdv~aVvH~H~~~a~a~s~~~~---~lp~~~~~~~-~~~~-------~i~~~~y~~~gs~  136 (214)
T PRK06833         74 ------SSELDMHLIFYRNREDINAIVHTHSPYATTLACLGW---ELPAVHYLIA-VAGP-------NVRCAEYATFGTK  136 (214)
T ss_pred             ------CccHHHHHHHHHhCCCCCEEEEeCcHHHHHHHHcCC---CCCcchhHHH-HHCC-------CeeeccCCCCChH
Confidence                  99999999999999 999999999999999999875   3444333332 1222       39999885 6899


Q ss_pred             HHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 009774          185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL  257 (526)
Q Consensus       185 ~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~  257 (526)
                      ++++.++++|++   .++|||+|||+++||+|+++|+.+++.+|++|++++.++++|.+..+ +++++++++.
T Consensus       137 ~la~~v~~~l~~---~~~vll~nHGv~~~G~~~~eA~~~~e~lE~~a~~~~~a~~~G~~~~l-~~~~~~~~~~  205 (214)
T PRK06833        137 ELAENAFEAMED---RRAVLLANHGLLAGANNLKNAFNIAEEIEFCAEIYYQTKSIGEPKLL-PEDEMENMAE  205 (214)
T ss_pred             HHHHHHHHHhCc---CCEEEECCCCCEEEeCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-CHHHHHHHHH
Confidence            999999999986   49999999999999999999999999999999999999999988665 5547776654

>PRK08087 L-fuculose phosphate aldolase; Provisional

Probab=100.00  E-value=4.5e-44  Score=342.63  Aligned_cols=202  Identities=22%  Similarity=0.310  Sum_probs=176.0

Q ss_pred             ccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCC
Q 009774           25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP  104 (526)
Q Consensus        25 ~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p  104 (526)
                      |..+++|++|+++||+++++||+.+++||||+|+++        .|||||||.++++|+++||++||++|++++|.  +|
T Consensus         1 ~~~~~~~~~l~~~~r~l~~~Gl~~~~~GNiS~R~~~--------~~lItpsG~~~~~l~~~di~~vd~~G~~~~g~--~p   70 (215)
T PRK08087          1 MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQD--------GMLITPTGIPYEKLTESHIVFVDGNGKHEEGK--LP   70 (215)
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEcCC--------CEEEeCCCCChhhCCHHHEEEECCCCCCCCCC--CC
Confidence            457789999999999999999999999999999976        69999999999999999999999999999874  55


Q ss_pred             CCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-CC
Q 009774          105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AY  182 (526)
Q Consensus       105 ~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~  182 (526)
                              |+|+.||+.||+.| |++||+|+||+|++++|+.+.   ++|...... ..+++      ..||+++|. ++
T Consensus        71 --------s~E~~lH~~iy~~rpdv~aViH~H~~~~~a~s~~~~---~ip~~~~~~-~~~~~------~~v~~~~y~~~g  132 (215)
T PRK08087         71 --------SSEWRFHMAAYQTRPDANAVVHNHAVHCTAVSILNR---PIPAIHYMI-AAAGG------NSIPCAPYATFG  132 (215)
T ss_pred             --------ChhHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCC---CCCcHHHHH-HHHcC------CCceeecCCCCC
Confidence                    99999999999999 999999999999999999875   344333222 22211      139999985 68


Q ss_pred             chHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 009774          183 ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL  257 (526)
Q Consensus       183 ~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~  257 (526)
                      +.++++.+++.|++   .+++||+|||+++||+|+++|+.+++.+|++|++++.++++|++....+++++++++.
T Consensus       133 s~~la~~~~~~l~~---~~~vLl~nHGv~~~G~~~~~A~~~~e~lE~~a~~~~~a~~~g~~~~~l~~e~~~~~~~  204 (215)
T PRK08087        133 TRELSEHVALALKN---RKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLKTLAITDPVPVLSDEEIAVVLE  204 (215)
T ss_pred             CHHHHHHHHHHhCc---CCEEEecCCCCEEEcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            99999999999986   4899999999999999999999999999999999999999998765566668877754

>PRK05874 L-fuculose-phosphate aldolase; Validated

Probab=100.00  E-value=1.3e-43  Score=338.56  Aligned_cols=199  Identities=22%  Similarity=0.287  Sum_probs=171.6

Q ss_pred             HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCC-CCCCC
Q 009774           27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSP-SPKPY  105 (526)
Q Consensus        27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~-~~~p~  105 (526)
                      ....|++|+++|++++++||+.+++||||+|++++       .|||||||.++++|+++||++||++|+++++. +.+| 
T Consensus         4 ~~~~r~~i~~~~~~l~~~Gl~~g~~GNiS~R~~~~-------~~lITPsg~~~~~l~~~Div~vd~~G~~i~~~~~~kP-   75 (217)
T PRK05874          4 VDDPESAVLAAAKDMLRRGLVEGTAGNISARRSDG-------NVVITPSSVDYAEMLLHDLVLVDAGGAVLHAKDGRSP-   75 (217)
T ss_pred             hHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCC-------CEEEeCCCCChhhCCHHHEEEEcCCCCEecCCCCCCC-
Confidence            45679999999999999999999999999999874       79999999999999999999999999999753 2344 


Q ss_pred             CCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-CCc
Q 009774          106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYE  183 (526)
Q Consensus       106 ~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~  183 (526)
                             |+|+.||+.|||.| |++||+|+||+|+++||+.+.   ++|....+....++|       .+|+.+|. |++
T Consensus        76 -------ssE~~~H~~iY~~rpdv~aViHtH~~~a~a~s~~~~---~l~~~~~~~~~~~~~-------~v~~~~y~~~gs  138 (217)
T PRK05874         76 -------STELNLHLACYRAFDDIGSVIHSHPVWATMFAVAHE---PIPACIDEFAIYCGG-------DVRCTEYAASGT  138 (217)
T ss_pred             -------chhHHHHHHHHHhCCCCCEEEECCcHHHHHHHHcCC---CCCcchhHHHHHcCC-------ceeeecCCCCCc
Confidence                   99999999999999 999999999999999999875   344222222222223       39999995 689


Q ss_pred             hHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccc
Q 009774          184 NELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRN  254 (526)
Q Consensus       184 ~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~  254 (526)
                      .+++++++++|++   .++|||+|||+++||+|+++|+.+++.+|++|++++.++++|++.+++++ ..++
T Consensus       139 ~ela~~v~~~l~~---~~~vlL~nHGv~~~G~~l~~A~~~~e~lE~~a~~~~~a~~~G~~~~l~~e-~~~~  205 (217)
T PRK05874        139 PEVGRNAVRALEG---RAAALIANHGLVAVGPRPDQVLRVTALVERTAQIVWGARALGGPVPIPED-VCRN  205 (217)
T ss_pred             HHHHHHHHHHhCc---CCEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCHH-HHHH
Confidence            9999999999986   49999999999999999999999999999999999999999988766554 4443

>PRK13213 araD L-ribulose-5-phosphate 4-epimerase; Reviewed

Probab=100.00  E-value=3.7e-43  Score=336.48  Aligned_cols=204  Identities=19%  Similarity=0.227  Sum_probs=170.6

Q ss_pred             HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCC-CCcccCCCCCCC
Q 009774           27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN-GTTLSSPSPKPY  105 (526)
Q Consensus        27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~d-g~~~~g~~~~p~  105 (526)
                      ++++|++|+++||+|+++||+.+++||||+|++++      +.|+|||||.++++|+++||++||++ |++++|. .+| 
T Consensus         2 ~~~~r~evv~~~~~l~~~gl~~gt~GNiS~r~~~~------~~~~ITpsg~~~~~l~~~div~vd~~~g~~~~g~-~kP-   73 (231)
T PRK13213          2 LEQLKQQVFEANLALPKYKLVTFTWGNVSGIDREH------GLVVIKPSGVEYDVMSVNDMVVVDLATGKVVEGD-KKP-   73 (231)
T ss_pred             hHHHHHHHHHHHHHHHHCCCCCCCcceEEEEECCC------CEEEEECCCCCcccCCHHHEEEEEcCCCCCcCCC-CCc-
Confidence            45789999999999999999999999999998653      48999999999999999999999995 9999986 356 


Q ss_pred             CCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCCC---
Q 009774          106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTA---  181 (526)
Q Consensus       106 ~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~~---  181 (526)
                             |+|+.||+.||+.| |++||||+||+|+++|++.+.+   +|.........++|       .||+++|.+   
T Consensus        74 -------SsE~~lH~~iY~~rpdv~AViHtHs~~at~~a~~~~~---lp~~~~~~~~~~~g-------~Ip~~~~~~~~~  136 (231)
T PRK13213         74 -------SSDTDTHLVLYRAFAEIGGIVHTHSRHATIWAQAGKS---LSALGTTHADYFYG-------PIPCTRLMTEAE  136 (231)
T ss_pred             -------CccHHHHHHHHHhCCCCCEEEEcCCHHHHHHHHcCCC---CCCcchHHHHHhCC-------Ccceeecccccc
Confidence                   99999999999999 9999999999999999999753   33222212222333       399998853   


Q ss_pred             --Cc--hHHHHHHHHHHhhC----CCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCCcc
Q 009774          182 --YE--NELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL-GLDWSTPNHGPT  252 (526)
Q Consensus       182 --~~--~~la~~i~~~l~~~----~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~-g~~~~~~~~~~~  252 (526)
                        ++  .++++.+++.+++.    ++.++|||+|||+++||+|+++||.+++.+|++|++++.++++ |++.+++++ ++
T Consensus       137 ~~g~~~~~~~~~~a~~~~~~~~~~~~~~avlL~nHG~v~~G~~l~eA~~~~e~lE~~A~i~~~a~~l~g~~~~l~~~-~~  215 (231)
T PRK13213        137 ITGDYEHETGKVIVETFAEQGLRAADIPAVLVNGHGPFAWGSNAANAVHNAVVLEEIAYMNLFTHQLTPGVGDMQQT-LL  215 (231)
T ss_pred             cCCccccchHHHHHHHHHhhcccccCCCEEEECCCCcEEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHH-HH
Confidence              44  38899999988642    3458999999999999999999999999999999999999999 776666655 55


Q ss_pred             cccc
Q 009774          253 RNFK  256 (526)
Q Consensus       253 ~~~~  256 (526)
                      +++.
T Consensus       216 ~~~~  219 (231)
T PRK13213        216 DKHY  219 (231)
T ss_pred             HHHH
Confidence            5543

>PRK12348 sgaE L-ribulose-5-phosphate 4-epimerase; Reviewed

Probab=100.00  E-value=6e-43  Score=337.05  Aligned_cols=203  Identities=17%  Similarity=0.242  Sum_probs=168.5

Q ss_pred             HHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCCC
Q 009774           28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPH  107 (526)
Q Consensus        28 ~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~~  107 (526)
                      +++|++|+++||+|+++||+.+++||||+|++++      +.|+|||||.++++|+++||++||+||++++|. .+|   
T Consensus         2 ~~~~~~l~~~~~~l~~~Gl~~g~~GNiS~r~~~~------~~~lItPsG~~~~~l~~~dlv~vd~dG~~ieg~-~kp---   71 (228)
T PRK12348          2 QKLKQQVFEANMDLPRYGLVTFTWGNVSAIDRER------GLVVIKPSGVAYETMKADDMVVVDMSGKVVEGE-YRP---   71 (228)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCcCCCeEEEEeCCC------CEEEEeCCCCChhhCCHHHEEEECCCCCCCCCC-CCC---
Confidence            4589999999999999999999999999998763      489999999999999999999999999999986 355   


Q ss_pred             CCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCccccc-HHHHHhhhcCCcccCccceeeecCC-----
Q 009774          108 KPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRIT-HMEMIKGIKGHGYYDELVVPIIENT-----  180 (526)
Q Consensus       108 ~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~vpv~~~~-----  180 (526)
                           |+|+.||+.|||+| |++||||+||||+++||+++..   +|.. ..+.. .+.|       .||++++.     
T Consensus        72 -----ssE~~lH~~IYr~rpdv~aVvHtH~p~ata~a~~~~~---ip~~~~~~~~-~~~g-------~i~~~~~~~~~~~  135 (228)
T PRK12348         72 -----SSDTATHLELYRRYPSLGGIVHTHSTHATAWAQAGLA---IPALGTTHAD-YFFG-------DIPCTRGLSEEEV  135 (228)
T ss_pred             -----CccHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCCC---CCCccHHHHH-HhCC-------CeeeecCCCchhh
Confidence                 99999999999999 9999999999999999999753   4432 22222 2223       38888762     


Q ss_pred             --CCchHHHHHHHHHHhhC--CCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccccc
Q 009774          181 --AYENELTDSLAKAIDAY--PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK  256 (526)
Q Consensus       181 --~~~~~la~~i~~~l~~~--~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~  256 (526)
                        ++..++++.+++.|++.  .+.+++||+|||++++|+|+.+||.+++.+|++||+++.++++|.+....+++.++++.
T Consensus       136 ~~~~~~~~~~~la~~l~~~~~~~~~avlL~nHG~v~~G~~l~eA~~~~~~lE~~a~~~~~a~~lg~~~~~~~~~~~~~~~  215 (228)
T PRK12348        136 QGEYELNTGKVIIETLGNAEPLHTPGIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARGINPQLNHIDSYLMNKHF  215 (228)
T ss_pred             ccchhhhHHHHHHHHHhhcCcccCcEEEEcCCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHH
Confidence              23346788899999863  13479999999999999999999999999999999999999999644444444655553

>PRK08193 araD L-ribulose-5-phosphate 4-epimerase; Reviewed

Probab=100.00  E-value=6.9e-43  Score=337.56  Aligned_cols=204  Identities=20%  Similarity=0.290  Sum_probs=170.9

Q ss_pred             HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCC
Q 009774           27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP  106 (526)
Q Consensus        27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~  106 (526)
                      .+++|++|+++||+|+++||+.+++||||+|++++      +.|||||||.++++|+++||++||+||++++|. .+|  
T Consensus         2 ~~~~r~~i~~~~~~l~~~gl~~g~~GNiS~r~~~~------~~~~ItpsG~~~~~l~~~Div~vd~dG~~~~g~-~kP--   72 (231)
T PRK08193          2 LEDLKQEVLEANLALPKHGLVTFTWGNVSAIDRER------GLFVIKPSGVDYDKMTAEDMVVVDLEGNVVEGK-LKP--   72 (231)
T ss_pred             hHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEecCC------CEEEEeCCCCChhhCChHHEEEECCCCCCCCCC-CCc--
Confidence            56789999999999999999999999999998663      479999999999999999999999999999986 355  


Q ss_pred             CCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCCC----
Q 009774          107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTA----  181 (526)
Q Consensus       107 ~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~~----  181 (526)
                            |+|+.||..|||.| |++||+|+||||+++||+.+.   +++.........+.|       .||+++|.+    
T Consensus        73 ------SsE~~~H~~IYr~rpdv~AVvHtHsp~ata~s~~~~---~l~~~~~~~~~~~~~-------~ip~~~~~~~~~~  136 (231)
T PRK08193         73 ------SSDTPTHLVLYKAFPEIGGIVHTHSRHATAWAQAGR---DIPALGTTHADYFYG-------DIPCTRKMTDEEI  136 (231)
T ss_pred             ------CccHHHHHHHHHhCCCCcEEEecCcHHHHHHHhcCC---CCCcchHHHHHHhCC-------CcceecCCCcccc
Confidence                  99999999999999 999999999999999999874   333222211122222       399998743    


Q ss_pred             ---CchHHHHHHHHHHhhC----CCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccc
Q 009774          182 ---YENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRN  254 (526)
Q Consensus       182 ---~~~~la~~i~~~l~~~----~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~  254 (526)
                         ++.++++.+++.|++.    ++.+++||+|||+++||+|+++|+.+++.+|++|++++.++++|......+++++++
T Consensus       137 ~~~~~~~~~~~ia~~l~~~~~~~~~~~avLl~nHG~v~~G~~l~eA~~~~e~lE~~a~~~~~a~~lg~~~~~l~~e~~~~  216 (231)
T PRK08193        137 NGEYEWETGKVIVETFEKRGIDPAAVPGVLVHSHGPFTWGKDAEDAVHNAVVLEEVAKMAYFTRQLNPQLPDMQQTLLDK  216 (231)
T ss_pred             cccchhhHHHHHHHHHhhccCCcccCCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHH
Confidence               3457899999999863    245899999999999999999999999999999999999999994444444546665


Q ss_pred             c
Q 009774          255 F  255 (526)
Q Consensus       255 ~  255 (526)
                      .
T Consensus       217 ~  217 (231)
T PRK08193        217 H  217 (231)
T ss_pred             H
Confidence            4

>PRK07490 hypothetical protein; Provisional

Probab=100.00  E-value=4.1e-43  Score=341.87  Aligned_cols=210  Identities=15%  Similarity=0.175  Sum_probs=177.2

Q ss_pred             HhhccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCC-CcccCC
Q 009774           22 LEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNG-TTLSSP  100 (526)
Q Consensus        22 ~~~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg-~~~~g~  100 (526)
                      |.+|+++++|++|+++||.++++||+.+++||||+|++++     .+.|||||||.++++|+++||++||+|| ++++|.
T Consensus         3 ~~~~~~~~~r~~l~~~~r~l~~~Gl~~g~~GniS~r~~~~-----~~~~lItpsG~~~~~l~~~div~vd~dg~~~~~g~   77 (245)
T PRK07490          3 MALSDEEQIRVDLAAAFRWIARLGMHEAVANHFSAAVSAD-----GKQFLLNPKWKHFSRIRASDLLLLDADDPSTAERP   77 (245)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHcCCcccccceEEEEccCC-----CCeEEEcCCCCChhhCcHHHeEEEcCCCCcccCCC
Confidence            5567889999999999999999999999999999998742     2489999999999999999999999999 567775


Q ss_pred             CCCCCCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeee-c
Q 009774          101 SPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPII-E  178 (526)
Q Consensus       101 ~~~p~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~-~  178 (526)
                      +.+|        |+|+.||+.|||.| |++||+|+||+|+++||++..+  .+|........ +.|       .||++ +
T Consensus        78 ~~~p--------sse~~lH~~iYr~rpdv~aVvHtH~~~ata~s~~~~~--~lp~~~~~~~~-~~g-------~v~~~~~  139 (245)
T PRK07490         78 DVPD--------ATAWAIHGQIHRRLPHARCVMHVHSVYATALACLADP--TLPPIDQNTAR-FFN-------RVAVDTL  139 (245)
T ss_pred             CCCC--------cHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHhcCC--CCCCccHHHHH-HcC-------CeeeccC
Confidence            3223        89999999999999 9999999999999999998642  24333232222 222       38886 4


Q ss_pred             CC-CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 009774          179 NT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL  257 (526)
Q Consensus       179 ~~-~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~  257 (526)
                      |. +++.++++.+++.|++   .++|||+|||+++||+|+++|+.+++.+|++|++++.++++|.+....++++++++..
T Consensus       140 y~~~~~~ela~~v~~~l~~---~~avlL~nHG~v~~G~~~~eA~~~~e~lE~~a~~~l~a~~~G~~~~~l~~~~~~~~~~  216 (245)
T PRK07490        140 YGGMALEEEGERLAGLLGD---KRRLLMGNHGVLVTGDTVAEAFDDLYYFERACQTYITALSTGQPLRVLSDAVAEKTAR  216 (245)
T ss_pred             CCCcCcHHHHHHHHHHhCc---CCEEEECCCCcEEecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            64 5788999999999986   5999999999999999999999999999999999999999998755566667777654

>TIGR00760 araD L-ribulose-5-phosphate 4-epimerase

Probab=100.00  E-value=9.6e-43  Score=336.31  Aligned_cols=205  Identities=20%  Similarity=0.287  Sum_probs=171.6

Q ss_pred             HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCC-CCcccCCCCCCC
Q 009774           27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN-GTTLSSPSPKPY  105 (526)
Q Consensus        27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~d-g~~~~g~~~~p~  105 (526)
                      .+++|++|+++||+|+++||+.+++||||+|++++      +.|||||||.++++|+++||++||+| |++++|. .+| 
T Consensus         2 ~~~~~~ei~~~~~~l~~~gl~~~~~GNiS~R~~~~------~~~lITPsG~~~~~l~~~div~vdl~~G~~i~g~-~kp-   73 (231)
T TIGR00760         2 LEQLKKEVLEANLALPKHQLVTFTWGNVSAIDRER------GLVVIKPSGVEYDVMTADDMVVVDLETGNVVEGS-KKP-   73 (231)
T ss_pred             hHHHHHHHHHHHHHHHHCCCCCCCCCeEEEEecCC------CEEEEeCCCCChhhCCHHHEEEEcCcCCccCCCC-CCC-
Confidence            56789999999999999999999999999998663      48999999999999999999999999 9999986 355 


Q ss_pred             CCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccH-HHHHhhhcCCcccCccceeeecCC---
Q 009774          106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITH-MEMIKGIKGHGYYDELVVPIIENT---  180 (526)
Q Consensus       106 ~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~vpv~~~~---  180 (526)
                             |+|+.||+.|||+| ||+||||+||||+++||+++.   ++|... ++.. .+.|       .||++++.   
T Consensus        74 -------S~E~~lH~~IYr~rpdv~aVvHtH~p~ata~a~~~~---~lp~~~~~~~~-~~~g-------~ip~~~~~~~~  135 (231)
T TIGR00760        74 -------SSDTPTHLALYRAFPSIGGIVHTHSRHATIWAQAGK---DIPALGTTHAD-YFYG-------TIPCTRPMTDE  135 (231)
T ss_pred             -------CccHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCC---CCCCcchHHHH-HhCC-------ceeeecCCCcc
Confidence                   99999999999999 999999999999999999975   333322 2222 2222       38988753   


Q ss_pred             ----CCchHHHHHHHHHHhhC----CCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc
Q 009774          181 ----AYENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPT  252 (526)
Q Consensus       181 ----~~~~~la~~i~~~l~~~----~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~  252 (526)
                          ++..++++.+++++++.    .+.+++||+|||++++|+|+.+||.+++.+|++||+++.++++|.+....+++++
T Consensus       136 ~~~~~~~~~~~~~la~~l~~~~~~~~~~~avlL~nHGvv~~G~~l~eA~~~~e~lE~~Ak~~~~a~~~g~~~~~~~~~~~  215 (231)
T TIGR00760       136 EINGEYELETGKVIVETFEKRGIDPAQIPGVLVHSHGPFAWGKDAANAVHNAVVLEEVAYMALFSRQLNPQLPPMQQTLL  215 (231)
T ss_pred             cccccchHhHHHHHHHHHhhccCCcccCCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHH
Confidence                23457899999999863    1237999999999999999999999999999999999999999975555556566


Q ss_pred             ccccc
Q 009774          253 RNFKL  257 (526)
Q Consensus       253 ~~~~~  257 (526)
                      +++..
T Consensus       216 ~~~~~  220 (231)
T TIGR00760       216 DKHYL  220 (231)
T ss_pred             HHHHH
Confidence            66543

The homolog to this family from Mycobacterium smegmatis is flanked by putative araB and araA genes, consistent with it also being araD.

>cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain

Probab=100.00  E-value=6.6e-43  Score=334.10  Aligned_cols=201  Identities=26%  Similarity=0.429  Sum_probs=174.3

Q ss_pred             HHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCCCC
Q 009774           29 ETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHK  108 (526)
Q Consensus        29 ~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~~~  108 (526)
                      +.|++|+++||+++++||+.+++||||+|++++      +.|||||||.++++++++||++||++|++++|.  +|    
T Consensus         2 ~~~~~l~~~~r~l~~~Gl~~~~~GniS~R~~~~------~~~~itpsG~~~~~l~~~dlv~vd~~g~~~~g~--~p----   69 (209)
T cd00398           2 KLKRKIIAACLLLDLYGWVTGTGGNVSARDRDR------GYFLITPSGVDYEEMTASDLVVVDAQGKVVEGK--KP----   69 (209)
T ss_pred             hHHHHHHHHHHHHHHcCCcccCCceEEEEeCCC------CEEEEeCCCCChHHCCHhhEEEEcCCCCCcCCC--CC----
Confidence            478999999999999999999999999999873      489999999999999999999999999999853  55    


Q ss_pred             CCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-C--Cch
Q 009774          109 PPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-A--YEN  184 (526)
Q Consensus       109 p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~--~~~  184 (526)
                          |+|+.||..||++| |++||+|+||+|+++||+.+.  ..+|..+.++...+.+       .||++||. |  ++.
T Consensus        70 ----s~E~~lH~~iy~~rpdv~aViHtH~~~~~a~s~~~~--~~~p~~~~~~~~~~~~-------~ip~~~~~~~~~~~~  136 (209)
T cd00398          70 ----SSETPLHLALYRARPDIGCIVHTHSTHATAVSQLKE--GLIPAGHTACAVYFTG-------DIPCTPYMTPETGED  136 (209)
T ss_pred             ----CccHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHhCC--CCCCcchHHHHHHcCC-------CeeecCCcCCCccHH
Confidence                99999999999999 999999999999999999875  2455555544433322       39999995 5  688


Q ss_pred             HHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 009774          185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL  257 (526)
Q Consensus       185 ~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~  257 (526)
                      ++++.+++.+.+   .+++||+|||+++||+|+.+|+.+++.+|++|++++.++++|++....+++++++++.
T Consensus       137 ~la~~~~~~l~~---~~~vll~nHG~~~~G~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~l~~~~~~~~~~  206 (209)
T cd00398         137 EIGTQRALGFPN---SKAVLLRNHGLFAWGPTLDEAFHLAVVLEVAAEIQLKALSMGGQLPPISLELLNKEYL  206 (209)
T ss_pred             HHHHHHhcCCCc---CCEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHh
Confidence            888888888765   5999999999999999999999999999999999999999998765566667776643

Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.

>PRK05834 hypothetical protein; Provisional

Probab=100.00  E-value=1.4e-42  Score=325.53  Aligned_cols=186  Identities=8%  Similarity=0.109  Sum_probs=160.9

Q ss_pred             HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCC
Q 009774           27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP  106 (526)
Q Consensus        27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~  106 (526)
                      ..++|++|++++++++++||+.+++||||+|++++       .|+|||||.++++|+++||++| +||+..++.  +|  
T Consensus         3 ~~~~~~el~~~~~~l~~~gl~~gt~GNiS~R~~~~-------~~lITPsG~~~~~l~~ediv~v-~~g~~~~~~--kP--   70 (194)
T PRK05834          3 DSNLIDELKSISLSMFRKNFFGLYHGSISAKIEAN-------QFIINKQNAIFDELDENSLIVL-YDKKDYRWK--EA--   70 (194)
T ss_pred             HHHHHHHHHHHHHHHHHCCCcccccceEEEEeCCC-------cEEEeCCCCccccCCHHHeEEE-eCCCccCCC--CC--
Confidence            34789999999999999999999999999999763       7999999999999999999999 999877653  55  


Q ss_pred             CCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCCC-Cch
Q 009774          107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTA-YEN  184 (526)
Q Consensus       107 ~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~~-~~~  184 (526)
                            |+|+.||+.||+.| |++||+|+||+|++++|+.+.   +++...+++...+ |       .||+++|.+ ++.
T Consensus        71 ------SsE~~~H~~IY~~rpdv~AVvHtHs~~ata~s~~~~---~i~~~~~~~~~~~-g-------~ipv~~~~~~~~~  133 (194)
T PRK05834         71 ------SIDSPIHASIYKNISEAKFIAYAMPPYTTAYSLRHN---KILPRDYFGYRSL-G-------EISIYDPKDFDDW  133 (194)
T ss_pred             ------CccHHHHHHHHhcCCCCCEEEEeCCHHHHHHHhcCC---CcCccChhHHhhC-C-------eeeecCccccchH
Confidence                  99999999999999 999999999999999999864   4554555554322 2       399998753 443


Q ss_pred             --HHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 009774          185 --ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL  242 (526)
Q Consensus       185 --~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~  242 (526)
                        ++++++++.|++. ..+++||+|||+++||+|+++|+.+++.+|++|++++.++++|.
T Consensus       134 ~~~la~~v~~~l~~~-~~~avLL~nHGvv~~G~~l~eA~~~~e~lE~~a~i~~~a~~~~~  192 (194)
T PRK05834        134 YERADTEILRYLQEK-NKNFVVIKGYGVYAYARDIYELAKKIAILENSCKILRLSDLMDR  192 (194)
T ss_pred             HHhHHHHHHHHHhhc-CCCEEEEcCCcceEECCCHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence              5789999999863 23599999999999999999999999999999999999999885

>PRK12347 sgbE L-ribulose-5-phosphate 4-epimerase; Reviewed

Probab=100.00  E-value=2e-42  Score=333.51  Aligned_cols=203  Identities=19%  Similarity=0.282  Sum_probs=169.6

Q ss_pred             HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeC-CCCcccCCCCCCC
Q 009774           27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSG-NGTTLSSPSPKPY  105 (526)
Q Consensus        27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~-dg~~~~g~~~~p~  105 (526)
                      ++++|++|+++||+|+++||+.+++||||+|++++      +.|||||||+++++|+++||++||+ +|++++|. .+| 
T Consensus         2 ~~~~~~~iv~~~~~l~~~gl~~~t~GNiS~R~~~~------~~~~ItPsG~~~~~l~~~div~vd~~~G~~i~g~-~kp-   73 (231)
T PRK12347          2 LEQLKADVLAANLALPAHHLVTFTWGNVSAVDETR------QLMVIKPSGVEYDVMTADDMVVVEIASGKVVEGS-KKP-   73 (231)
T ss_pred             hHHHHHHHHHHHHHHHHCCCCCCCCceEEEEecCC------CeEEEeCCCCCcccCCHHHEEEEEcCCCcCCCCC-CCc-
Confidence            56789999999999999999999999999998763      4799999999999999999999999 99999986 355 


Q ss_pred             CCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCccccc-HHHHHhhhcCCcccCccceeeecCC---
Q 009774          106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRIT-HMEMIKGIKGHGYYDELVVPIIENT---  180 (526)
Q Consensus       106 ~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~vpv~~~~---  180 (526)
                             |+|+.||+.|||.| |++||+|+||||+++||+++.+   +|.. ..+. ..+.|       .||+++|.   
T Consensus        74 -------S~E~~lH~~iYr~rpdv~aViHtHs~~ata~a~~~~~---lp~~~~~~~-~~~~g-------~Ip~~~~~~~~  135 (231)
T PRK12347         74 -------SSDTPTHLALYRRYPEIGGIVHTHSRHATIWSQAGLD---LPAWGTTHA-DYFYG-------AIPCTRLMTAE  135 (231)
T ss_pred             -------CccHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCCC---CCCcchHHH-HHhCC-------ceeeecccCch
Confidence                   99999999999999 9999999999999999999753   3332 2222 22223       38998763   


Q ss_pred             ----CCchHHHHHHHHHHhhC----CCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc
Q 009774          181 ----AYENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPT  252 (526)
Q Consensus       181 ----~~~~~la~~i~~~l~~~----~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~  252 (526)
                          ++..++++.+++.++.+    ++.++|||+|||++++|+|+.+||.+++.+|++||+++.++++|......+++++
T Consensus       136 ~~a~~~~~e~~~~va~~l~~~~~~~~~~~avLL~NHG~v~~G~~l~eA~~~~e~lE~~A~~~~~a~~lg~~~~~~~~~~~  215 (231)
T PRK12347        136 EINGEYEYQTGEVIIETFEERGISPAQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPAMQNELL  215 (231)
T ss_pred             hcccccchhhHHHHHHHHhhccccccCCCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHH
Confidence                34557899999999853    2468999999999999999999999999999999999999999933333444455


Q ss_pred             ccc
Q 009774          253 RNF  255 (526)
Q Consensus       253 ~~~  255 (526)
                      ++.
T Consensus       216 ~~~  218 (231)
T PRK12347        216 DKH  218 (231)
T ss_pred             HHH
Confidence            554

>PRK06755 hypothetical protein; Validated

Probab=100.00  E-value=4.4e-42  Score=324.55  Aligned_cols=201  Identities=19%  Similarity=0.293  Sum_probs=169.0

Q ss_pred             HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCC
Q 009774           27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP  106 (526)
Q Consensus        27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~  106 (526)
                      +.+.|++|++++|+++++||+.+++||+|+|.+++     ...|+|||||.++++|+|+||++||++|+++.+++.||  
T Consensus         4 ~~~~~~~l~~~~~~l~~rGw~~gtsGNlSv~~~~~-----~~~~~ITpSG~~k~~L~~eDiv~vd~~g~~~~~~~~kP--   76 (209)
T PRK06755          4 FLKKWNELKDVKSELALRDWFYGTKISLSLCTSKE-----PLTFLVNVEGRDKGLFSEEDFIVVNCMCEPVFENEEKP--   76 (209)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCccCCCCeEEEecCC-----CcEEEEeCCCCCcccCCcccEEEEeCCCCCccCCCCCc--
Confidence            34678999999999999999999999999987653     12699999999999999999999999999884332455  


Q ss_pred             CCCCCCCCchHHHHHHHHhcCcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-CCchH
Q 009774          107 HKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYENE  185 (526)
Q Consensus       107 ~~p~~~S~E~~lH~~iy~~~dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~~  185 (526)
                            |+|+.||+.||+.++++||+|+||+|++++|+.......+|+...++++.+++ .+-.+..||++||. +++.+
T Consensus        77 ------SsE~~~H~~IY~~~~~~AVvHtHs~~at~ls~~~~~~~~i~~~~~e~~~~~g~-~~~~~~~IPiv~~~~~~~~~  149 (209)
T PRK06755         77 ------AAESFMHADIYKKSSAECILQVQTVDSHLISELYGEEGEVTFDKRSVERVFGK-EGITEMTIPIVEDEKKFADL  149 (209)
T ss_pred             ------CccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHhhccCCcccccchHHHHHhcc-cCCCceEEEEEeCCCchhHH
Confidence                  99999999999988999999999999999999832223466566777777643 23222359999986 56788


Q ss_pred             HHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 009774          186 LTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDW  244 (526)
Q Consensus       186 la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~  244 (526)
                      +++.+++.+++   .++|||+|||+++||+|+++|+.++|.+|++|++++.++++++.+
T Consensus       150 la~~~~~~~~~---~~avLl~~HGv~~~G~~l~eA~~~~E~lE~l~~~~~~~~~l~~~~  205 (209)
T PRK06755        150 LENNVPNFIEG---GGVVLVHNYGMIVWGKTPEEAKKWLEGIEYLMNYHVKLLMIKGAK  205 (209)
T ss_pred             HHHHHHhhccC---CCEEEEcCCCeEEEcCCHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            88888888865   599999999999999999999999999999999999999877653

>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated

Probab=100.00  E-value=1.8e-42  Score=333.56  Aligned_cols=204  Identities=21%  Similarity=0.320  Sum_probs=174.2

Q ss_pred             HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCC
Q 009774           27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP  106 (526)
Q Consensus        27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~  106 (526)
                      .+++|++|++++|+++++||+.+++||||+|++++      +.|||||||.++++|+++||++||++|++++|. .+|  
T Consensus         8 ~~~~~~~l~~~~r~l~~~Gl~~~~~GNiS~R~~~~------~~~~ItpsG~~~~~l~~~div~vd~~G~~~~g~-~~p--   78 (221)
T PRK06557          8 VEKLREEVCKLHLELPKYGLVVWTSGNVSARDPGT------DLVVIKPSGVSYDDLTPEDMVVVDLDGNVVEGD-LKP--   78 (221)
T ss_pred             HHHHHHHHHHHHHHHHHCCCccccCceEEEEeCCC------CEEEEeCCCCChhhCCHHHEEEEcCCCCCcCCC-CCC--
Confidence            56789999999999999999999999999999763      489999999999999999999999999999885 355  


Q ss_pred             CCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-CCch
Q 009774          107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYEN  184 (526)
Q Consensus       107 ~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~  184 (526)
                            |+|+.||..||+.| ||+||+|+||+|+++||+++.   ++|.........+.+       .||+++|. +++.
T Consensus        79 ------s~E~~lH~~iy~~~pdv~aVvH~H~~~~~a~a~~~~---~~p~~~~~~~~~~~~-------~ip~~~y~~~g~~  142 (221)
T PRK06557         79 ------SSDTASHLYVYRHMPDVGGVVHTHSTYATAWAARGE---PIPCVLTAMADEFGG-------PIPVGPFALIGDE  142 (221)
T ss_pred             ------CccHHHHHHHHHhCCCCCEEEeeCcHHHHHHHHhCC---CCChhHHHHHHHhCC-------CeeccCCcCCCcH
Confidence                  89999999999999 999999999999999999875   344322222222222       49999996 5889


Q ss_pred             HHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 009774          185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL  257 (526)
Q Consensus       185 ~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~  257 (526)
                      ++++.+++.|.. ++.+++||+|||+++||+|+++|+.+++.+|++|++++.++++|++.+++ +++++++..
T Consensus       143 ela~~i~~~l~~-~~~~~vll~nHG~~~~G~~~~eA~~~~e~lE~~a~~~~~a~~~G~~~~l~-~~~~~~~~~  213 (221)
T PRK06557        143 AIGKGIVETLKG-GRSPAVLMQNHGVFTIGKDAEDAVKAAVMVEEVARTVHIARQLGEPIPIP-QEEIDRLYD  213 (221)
T ss_pred             HHHHHHHHHhCc-CCCCEEEECCCCceEEcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-HHHHHHHHH
Confidence            999999999931 23699999999999999999999999999999999999999999887654 446666543

>PRK06486 hypothetical protein; Provisional

Probab=100.00  E-value=1.2e-42  Score=341.06  Aligned_cols=219  Identities=17%  Similarity=0.212  Sum_probs=183.8

Q ss_pred             cccchhhHHHHhhccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEe
Q 009774           12 AAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLS   91 (526)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd   91 (526)
                      +|.|+--.-++.+.+++++|++|++++|+++++||+.+++||||+|++++     .+.|||||||.++++|+++||++||
T Consensus         9 ~~~~~~~~~~~~~~~~~~~r~~l~~~~r~l~~~Gl~~gt~GNiSvR~~~~-----~~~~lITPsG~~~~~lt~eDlv~vd   83 (262)
T PRK06486          9 SAPPAGNRPLLDSDAVAQARVDLAACFRAAARHGLEEGICNHFSAVLPGH-----DDLFLVNPYGYAFSEITASDLLICD   83 (262)
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHcCCccccCceEEEEecCC-----CCEEEEcCCCCCcccCcHHHeEEEC
Confidence            44555555567777889999999999999999999999999999999762     2489999999999999999999999


Q ss_pred             CCCCcccCCCCCCCCCCCCCCC-CchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCccc
Q 009774           92 GNGTTLSSPSPKPYPHKPPKCS-DCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYY  169 (526)
Q Consensus        92 ~dg~~~~g~~~~p~~~~p~~~S-~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~  169 (526)
                      ++|++++|. .+|        | +|+.||..|||+| ||+||||+||+|+++||+...  .++++..+++.+.+ |    
T Consensus        84 ~dG~~veg~-~kP--------s~~e~~lH~~IYr~rpDv~aVvHtHs~~a~a~s~~~~--~~l~~~~~~~~~~~-g----  147 (262)
T PRK06486         84 FDGNVLAGR-GEP--------EATAFFIHARIHRAIPRAKAAFHTHMPYATALSLTEG--RPLTTLGQTALKFY-G----  147 (262)
T ss_pred             CCCCCcCCC-CCC--------ChhHHHHHHHHHHhCCCCCEEEEeCChHHhhhhhcCC--CCCCcccHHHHHHC-C----
Confidence            999999986 355        5 5699999999999 999999999999999999842  24554455554422 2    


Q ss_pred             Cccceeeec-C--CCCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Q 009774          170 DELVVPIIE-N--TAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWST  246 (526)
Q Consensus       170 ~~~~vpv~~-~--~~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~  246 (526)
                         .||+++ |  .+++.++++.++++|++   .++|||+|||+++||+|+++|+.+++.+|++|++++.++++|.+...
T Consensus       148 ---~i~~~~~~~~~~~s~ela~~va~al~~---~~avLL~nHG~v~~G~~l~eA~~~~~~lE~~a~i~~~a~~~G~~~~~  221 (262)
T PRK06486        148 ---RTAVDEDYNGLALDAAEGDRIARAMGD---ADIVFLKNHGVMVCGPRIAEAWDDLYYLERACEVQVLAMSTGRPLVP  221 (262)
T ss_pred             ---CeeeccCCCCccCchhHHHHHHHHhCc---CCEEEECCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence               378776 3  24678999999999986   59999999999999999999999999999999999999999987666


Q ss_pred             CCCCccccccc
Q 009774          247 PNHGPTRNFKL  257 (526)
Q Consensus       247 ~~~~~~~~~~~  257 (526)
                      ++++.++++..
T Consensus       222 ~~~~~~~~~~~  232 (262)
T PRK06486        222 VDPAIAAAVAR  232 (262)
T ss_pred             CCHHHHHHHHH
Confidence            66656666533

>PRK08130 putative aldolase; Validated

Probab=100.00  E-value=1.4e-42  Score=332.27  Aligned_cols=202  Identities=24%  Similarity=0.366  Sum_probs=171.3

Q ss_pred             ccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCC
Q 009774           25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP  104 (526)
Q Consensus        25 ~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p  104 (526)
                      |.++++|++|++++|+++++||+.+++||||+|++++       .|||||||.++++|+++||++||++|++++|.  +|
T Consensus         1 ~~~~~~~~~l~~~~~~l~~~gl~~~~~GNiS~R~~~~-------~~lItpsG~~~~~l~~~div~vd~~g~~~~g~--~p   71 (213)
T PRK08130          1 MTEQALREEIVRLGRSLFQRGYTVGSAGNISARLDDG-------GWLVTPTGSCLGRLDPARLSKVDADGNWLSGD--KP   71 (213)
T ss_pred             CCHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCC-------CEEEeCCCCCccCCCHhHEEEECCCCCCCCCC--CC
Confidence            4578899999999999999999999999999999874       79999999999999999999999999999874  55


Q ss_pred             CCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCC--Cccc-ccHHHHHhhhcCCcccCccceeeecCC
Q 009774          105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMS--KEFR-ITHMEMIKGIKGHGYYDELVVPIIENT  180 (526)
Q Consensus       105 ~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~--~~~~-~~~~~~~~~~~g~~~~~~~~vpv~~~~  180 (526)
                              |+|+.+|+.||++| |++||+|+||+|+++||+.+...  ..++ +....+. .+ |       .||++||.
T Consensus        72 --------s~E~~~H~~iy~~rpdv~avvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~-~~-g-------~i~v~~y~  134 (213)
T PRK08130         72 --------SKEVPLHRAIYRNNPECGAVVHLHSTHLTALSCLGGLDPTNVLPPFTPYYVM-RV-G-------HVPLIPYY  134 (213)
T ss_pred             --------ChhHHHHHHHHHhCCCCCEEEECCcHHHHHHHhcCccccccCCCCCChhhhh-cc-C-------ccceECCC
Confidence                    99999999999999 99999999999999999986310  1222 2222222 12 2       39999985


Q ss_pred             -CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 009774          181 -AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL  257 (526)
Q Consensus       181 -~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~  257 (526)
                       |++.++++.+++.+++   .++|||+|||+++||+|+++|+.+++.+|++|++++.++.++ +..+ +++++++++.
T Consensus       135 ~~g~~~la~~~~~~l~~---~~~vll~nHGvi~~G~s~~~A~~~~e~lE~~a~~~~~a~~~~-~~~l-~~~~~~~~~~  207 (213)
T PRK08130        135 RPGDPAIAEALAGLAAR---YRAVLLANHGPVVWGSSLEAAVNATEELEETAKLILLLGGRP-PRYL-TDEEIAELRS  207 (213)
T ss_pred             CCChHHHHHHHHHHhcc---CCEEEEcCCCCeeeCCCHHHHHHHHHHHHHHHHHHHHhcCCC-CCCC-CHHHHHHHHH
Confidence             7999999999999987   499999999999999999999999999999999999997653 4444 4457766543

>PRK06754 mtnB methylthioribulose-1-phosphate dehydratase; Reviewed

Probab=100.00  E-value=4.3e-42  Score=327.07  Aligned_cols=204  Identities=30%  Similarity=0.494  Sum_probs=169.4

Q ss_pred             cHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCC
Q 009774           26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPY  105 (526)
Q Consensus        26 ~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~  105 (526)
                      +.+..+++|+++||+++++||+.+++||||+|++++     ...|||||||.++++|+++||++||.+|++++|.+.+| 
T Consensus         3 ~~~~~~~~l~~~~r~l~~~Gl~~g~~GNiSvR~~~~-----~~~~lITpSG~~~~~l~~~div~vd~~g~~~~~~~~kP-   76 (208)
T PRK06754          3 QLQRRWNELAEIKKELAARDWFPATSGNLSIKVSDD-----PLTFLVTASGKDKRKTTPEDFLLVDHDGKPVEETELKP-   76 (208)
T ss_pred             hHHHHHHHHHHHHHHHHHcCCcccCCCEEEEEeCCC-----CCEEEEeCCCCCcccCCHHHEEEEcCCCCCCCCCCCCC-
Confidence            467789999999999999999999999999999763     12699999999999999999999999999998653455 


Q ss_pred             CCCCCCCCCchHHHHHHHHhcCcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCCCCchH
Q 009774          106 PHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENE  185 (526)
Q Consensus       106 ~~~p~~~S~E~~lH~~iy~~~dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~~~~~~  185 (526)
                             |+|+.||+.||+..|++||+|+||+|++++|+.......+++...++++.++.........||++++.+++.+
T Consensus        77 -------SsE~~lH~~iY~~pdv~aViHtH~~~at~~s~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~vpv~~~~~~~~e  149 (208)
T PRK06754         77 -------SAETLLHTHIYNNTNAGCVLHVHTVDNNVISELYGDDGAVTFQGQEIIKALGIWEENAEIHIPIIENHADIPT  149 (208)
T ss_pred             -------CccHHHHHHHHhCCCCeEEEEeCCHHHHHHHhhcCCCCeeeecChhhhhccCccccCceEEEEEecCCCCHHH
Confidence                   9999999999986699999999999999999986432345544445544332100001124899986667899


Q ss_pred             HHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 009774          186 LTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDW  244 (526)
Q Consensus       186 la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~  244 (526)
                      +++.++++++.  +.+++||+|||+++||+|+.+|+.++|.+|++|++++.+++++.+.
T Consensus       150 La~~v~~~l~~--~~~avLl~nHG~v~~G~~l~~A~~~~E~lE~~a~~~~~~~~~~~~~  206 (208)
T PRK06754        150 LAEEFAKHIQG--DSGAVLIRNHGITVWGRDAFEAKKHLEAYEFLFSYHIKLLSIQGGV  206 (208)
T ss_pred             HHHHHHHHhcc--CCcEEEECCCceEEEeCCHHHHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence            99999999972  2589999999999999999999999999999999999999987664

>PRK13145 araD L-ribulose-5-phosphate 4-epimerase; Provisional

Probab=100.00  E-value=3.3e-42  Score=332.59  Aligned_cols=205  Identities=19%  Similarity=0.284  Sum_probs=169.1

Q ss_pred             cHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCC
Q 009774           26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPY  105 (526)
Q Consensus        26 ~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~  105 (526)
                      ..+++|++|+++||+|+++||+.+++||||+|.+++      +.|+|||||.++++|+++||++||++|++++|. .+| 
T Consensus         2 ~~~~~r~~l~~~~r~l~~~gl~~g~~GNiS~r~~~~------~~~~ItPsg~~~~~l~~~div~vd~~G~~~eG~-~kP-   73 (234)
T PRK13145          2 NLQEMRERVCAANKSLPKHGLVKFTWGNVSEVCREL------GRIVIKPSGVDYDELTPENMVVTDLDGNVVEGD-LNP-   73 (234)
T ss_pred             cHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEecCC------CEEEEeCCCCCcccCCHHHEEEECCCCCCcCCC-CCc-
Confidence            467899999999999999999999999999998763      489999999999999999999999999999986 355 


Q ss_pred             CCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC----
Q 009774          106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT----  180 (526)
Q Consensus       106 ~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~----  180 (526)
                             |+|+.||..||+.| ||+||+|+||||+++|++++.   ++|.........+.|       .||+++|.    
T Consensus        74 -------SsE~~lH~~IY~~rpdv~AVvHtH~~~ata~a~~~~---~lp~~~~~~~~~~~g-------~vp~~~~~~~~~  136 (234)
T PRK13145         74 -------SSDLPTHVELYKAWPEVGGIVHTHSTEAVGWAQAGR---DIPFYGTTHADYFYG-------PIPCARSLTKDE  136 (234)
T ss_pred             -------cccHHHHHHHHHhCCCCCEEEeCCCHHHHHHHHcCC---CCCCchhHHHHHhCC-------CcccccccCccc
Confidence                   99999999999999 999999999999999999975   344321111122223       38888763    


Q ss_pred             ---CCchHHHHHHHHHHhhCC----CCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccc
Q 009774          181 ---AYENELTDSLAKAIDAYP----KATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTR  253 (526)
Q Consensus       181 ---~~~~~la~~i~~~l~~~~----~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~  253 (526)
                         ++..++++.+++++++.+    +.+++||+|||+++||+|+++||.+++.+|++||+++.++++|......+++.++
T Consensus       137 ~~~~~~~~~~~~va~~l~~~~~~~~~~~avLL~nHG~v~~G~~l~eA~~~~e~lE~~A~~~~~a~~lg~~~~~~~~~~~~  216 (234)
T PRK13145        137 VNGAYEKETGSVIIEEFEKRGLDPMAVPGIVVRNHGPFTWGKNPEQAVYHSVVLEEVAKMNRLTEQINPRVEPAPQYIMD  216 (234)
T ss_pred             cccccchhhHHHHHHHHhhhccccccCCEEEEcCCCeeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHH
Confidence               235577889999987621    2479999999999999999999999999999999999999999443333443555


Q ss_pred             cc
Q 009774          254 NF  255 (526)
Q Consensus       254 ~~  255 (526)
                      ++
T Consensus       217 ~~  218 (234)
T PRK13145        217 KH  218 (234)
T ss_pred             HH
Confidence            54

>TIGR01086 fucA L-fuculose phosphate aldolase

Probab=100.00  E-value=3.2e-42  Score=329.79  Aligned_cols=198  Identities=19%  Similarity=0.210  Sum_probs=171.1

Q ss_pred             HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCC
Q 009774           27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP  106 (526)
Q Consensus        27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~  106 (526)
                      +.+.|++|+++||+|+++||+.+++||||+|+++        .|||||||+++++|+++||++||+||++++|.  +|  
T Consensus         2 ~~~~~~~i~~~~~~l~~~Gl~~g~~GNiS~R~~~--------~~lItPsG~~~~~l~~~div~vd~~G~~~~g~--kp--   69 (214)
T TIGR01086         2 RRELSQRIIDTCLEMTTLGLNQGTAGNVSVRRYQ--------GMLITPTGGPYYEKLTESIVYVIDGGGKEEEK--LP--   69 (214)
T ss_pred             hHHHHHHHHHHHHHHHHcCCCCCCcceEEEECCC--------CEEEECCCCCcccCCHHHEEEEcCCCCCCCCC--CC--
Confidence            4678999999999999999999999999999876        49999999999999999999999999999873  66  


Q ss_pred             CCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-CCch
Q 009774          107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYEN  184 (526)
Q Consensus       107 ~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~  184 (526)
                            |+|+.+|..||+.+ |++||+|+||+|++++++...   ++|...+++....++       .||+++|. +++.
T Consensus        70 ------sse~~~H~~iy~~rpdv~avvH~H~~~~~~~~~~~~---~lp~~~~~~~~~~~~-------~i~~v~y~~~gs~  133 (214)
T TIGR01086        70 ------SSEWWFHLMAYYQRRPDNAVVHNHHIVCATASILLK---RIPAIHYMVAASGGG-------NIPCVPYATFGST  133 (214)
T ss_pred             ------ChhHHHHHHHHHhCCCCCEEEeCCCHHHHHHHHcCC---CCCcchHHHHHhcCC-------CccccCCCCCChH
Confidence                  89999999999998 999999999999999998864   344444544432222       38999996 6899


Q ss_pred             HHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccc
Q 009774          185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNF  255 (526)
Q Consensus       185 ~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~  255 (526)
                      ++++.+++.+++   .++|||+|||+++||+|+++|+.+++.+|++|++++.++.+|+.....++++++++
T Consensus       134 ~la~~v~~~~~~---~~~vLL~nHG~~~~G~~l~eA~~~~e~lE~~a~~~~~a~~~g~~~~~l~~~~~~~~  201 (214)
T TIGR01086       134 KLASEVVAGILK---SKAILLLHHGLIIACENLLKALWLAAEVEVLAAQYLKTLLAITDPPPLLSDEMIVV  201 (214)
T ss_pred             HHHHHHHHHhhh---CCEEehhcCCCEEecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCHHHHHHH
Confidence            999999999986   48999999999999999999999999999999999999988864334444466654

Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version.

>PRK06661 hypothetical protein; Provisional

Probab=100.00  E-value=1.2e-41  Score=328.32  Aligned_cols=200  Identities=15%  Similarity=0.161  Sum_probs=168.0

Q ss_pred             HHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCCCC
Q 009774           29 ETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHK  108 (526)
Q Consensus        29 ~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~~~  108 (526)
                      ++|++|++++|.|+++||+.+++||||+|++++      +.|||||||.++++|+++||++||+||++++|.. +|    
T Consensus         2 ~~r~~l~~a~r~l~~~Gl~~g~~GNiS~R~~~~------~~~lItPsG~~~~~l~~~div~vd~dG~~~~g~~-~~----   70 (231)
T PRK06661          2 DIKYNLAAAYRIMAYLSLDDHTYTHLSARPKNA------DFYYIYPFGLRFEEVTTENLLKVSLDGQILEGEE-YQ----   70 (231)
T ss_pred             cHHHHHHHHHHHHHHcCCcccCCceEEEEeCCC------CEEEEeCCCCChhhCcHHHeEEECCCCCCcCCCC-CC----
Confidence            468999999999999999999999999998763      4899999999999999999999999999999753 22    


Q ss_pred             CCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-CCc--h
Q 009774          109 PPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYE--N  184 (526)
Q Consensus       109 p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~--~  184 (526)
                        .+|+|+.||..||++| ||+||+|+||||++++|+.+.+.  .|+.+..+ . +.|       .||+.+|. +..  .
T Consensus        71 --~~sse~~lH~~IY~~rpdv~aVvH~H~~~a~a~s~~~~~~--~p~~~~~~-~-~~~-------~i~~~~~~~~~~~~~  137 (231)
T PRK06661         71 --YNKTGYFIHGSIYKTRPDISAIFHYHTPASIAVSALKCGL--LPISQWAL-H-FYD-------RISYHNYNSLALDAD  137 (231)
T ss_pred             --CChhHHHHHHHHHHcCCCCCEEEEECChHHHHHHhcCCCC--CCccHhHH-H-HcC-------CceecCCCccccCch
Confidence              1167999999999999 99999999999999999987532  23443322 2 222       38888764 333  6


Q ss_pred             HHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCCccccc
Q 009774          185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL-GLDWSTPNHGPTRNF  255 (526)
Q Consensus       185 ~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~-g~~~~~~~~~~~~~~  255 (526)
                      +.++.+++++++   .+++||+|||+++||+|+++|+.+++.+|++|++++.++++ |.+..+++++..+..
T Consensus       138 ~~~~~~a~~l~~---~~avll~nHG~v~~G~sl~eA~~~~~~lE~~a~~~~~a~~~~g~~~~l~~~~~~~~~  206 (231)
T PRK06661        138 KQSSRLVNDLKQ---NYVMLLRNHGAITCGKTIHEAMFYTYHLEQACKTQCLLNSTKKQELIIPSVEICKKT  206 (231)
T ss_pred             hHHHHHHHHhCC---CCEEEECCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            779999999986   59999999999999999999999999999999999999999 777777777444444

>PRK09220 methylthioribulose-1-phosphate dehydratase; Provisional

Probab=100.00  E-value=3.4e-41  Score=319.91  Aligned_cols=201  Identities=24%  Similarity=0.445  Sum_probs=171.5

Q ss_pred             ccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCC
Q 009774           25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP  104 (526)
Q Consensus        25 ~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p  104 (526)
                      |..++.+++|++++|+++++||+.+++||||+|++++       .|||||||.++++|+++||++||++|++++|. .+|
T Consensus         1 ~~~~~~~~~l~~~~r~l~~~Gl~~~~~GNiSvr~~~~-------~~lItpsG~~~~~l~~~di~~vd~~g~~~~~~-~~P   72 (204)
T PRK09220          1 MTLEELLQQLIAAGRWIGARGWVPATSGNMSVRLDEQ-------HCAITVSGKDKGSLTAEDFLQVDIAGNAVPSG-RKP   72 (204)
T ss_pred             CcHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEcCCC-------EEEEECCCCChhHCChhhEEEEcCCCCCCCCC-CCc
Confidence            4578899999999999999999999999999999763       89999999999999999999999999999865 355


Q ss_pred             CCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccC-ccceeeecCCCC
Q 009774          105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYD-ELVVPIIENTAY  182 (526)
Q Consensus       105 ~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~vpv~~~~~~  182 (526)
                              |+|+.||+.|||+| |++||+|+||+|++++|+.... ..++...+++.+.++|..+.. ...||++++.++
T Consensus        73 --------s~E~~lH~~iy~~rpdv~aViH~H~~~~~a~s~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~vp~~~~~~~  143 (204)
T PRK09220         73 --------SAETLLHTQLYRLFPEIGAVLHTHSVNATVLSRVEKS-DALVLEGYELQKAFAGQTTHETAVVVPIFDNDQD  143 (204)
T ss_pred             --------ChhHHHHHHHHHhCCCCcEEEecCcHHHHHHHhhcCC-CeeeecChhHHHHhCCCcccCCeeEEeeecCCCC
Confidence                    99999999999999 9999999999999999998642 235555566665555432111 124777765557


Q ss_pred             chHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 009774          183 ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL  242 (526)
Q Consensus       183 ~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~  242 (526)
                      +.++++.++++|++++..+++||+|||+++||+|+++|+.++|.+|+.|++.+.+++++.
T Consensus       144 ~~eLa~~v~~~l~~~~~~~avlL~nHGvi~~G~~~~eA~~~~e~lE~~~~~~~~~~~~~~  203 (204)
T PRK09220        144 IARLAARVAPYLDAQPLRYGYLIRGHGLYCWGRDMAEARRHLEGLEFLFECELERRLLEA  203 (204)
T ss_pred             HHHHHHHHHHHHHhCCCCcEEEECCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            899999999999986444699999999999999999999999999999999999998763

>PRK06357 hypothetical protein; Provisional

Probab=100.00  E-value=3.7e-41  Score=321.41  Aligned_cols=194  Identities=18%  Similarity=0.248  Sum_probs=163.8

Q ss_pred             HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCC---CCCCCCCCEEEEe-CCCCcccCCCC
Q 009774           27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQ---KERMEPEDMYVLS-GNGTTLSSPSP  102 (526)
Q Consensus        27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~---~~~l~~~div~vd-~dg~~~~g~~~  102 (526)
                      .++.|++|+++||+++++||+.+++||||+|++++   .+.+.|||||||++   +++|+++||++|| .+|++++|. .
T Consensus         3 ~~~~r~~l~~~~r~l~~~Gl~~gt~GNiS~R~~~~---~~~~~~~ITpsg~~g~~~~~lt~~Div~vd~~~g~~~~g~-~   78 (216)
T PRK06357          3 FQKEREDLAKVVKTMFDRKETNAAGGNISVRMTAE---KNKEYIIMTPTLMSEAKLCDLSPYQILVVDLNTGEVIEGV-G   78 (216)
T ss_pred             hHHHHHHHHHHHHHHHHcCCCccCCCEEEEEeccc---CCCCeEEEeCCCCCccccccCCHHHEEEEecCCCeEcCCC-C
Confidence            56789999999999999999999999999999420   01248999999874   9999999999999 589999886 3


Q ss_pred             CCCCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-
Q 009774          103 KPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-  180 (526)
Q Consensus       103 ~p~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-  180 (526)
                      +|        |+|+.+|..||+.| |++||+|+||+|+++|++.+.+   +|.... ....+ |       .||++||. 
T Consensus        79 kP--------SsE~~lH~~IY~~rpdv~aVvH~H~~~ata~a~~~~~---lp~~~~-~~~~~-g-------~i~~~p~~~  138 (216)
T PRK06357         79 RV--------TREINMHEAAYVANPKIKCVYHSHAKESMFWATLGLE---MPNLTE-ATQKL-G-------KIPTLPFAP  138 (216)
T ss_pred             CC--------ChhHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCCC---CCCccH-HHHhc-C-------CcceecccC
Confidence            55        99999999999999 9999999999999999988753   333222 22222 2       38999985 


Q ss_pred             CCchHHHHHHHHHHhhCCC---CeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 009774          181 AYENELTDSLAKAIDAYPK---ATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDW  244 (526)
Q Consensus       181 ~~~~~la~~i~~~l~~~~~---~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~  244 (526)
                      +++.++++.+++++++.+.   .+++||+|||+++||+|+.+||.+++.+|++|++++.+++++...
T Consensus       139 ~gs~ela~~v~~~l~~~~~~~~~~~vLl~nHGvv~~G~~l~eA~~~~e~lE~~a~i~~~a~~l~~~~  205 (216)
T PRK06357        139 ATSPELAEIVRKHLIELGDKAVPSAFLLNSHGIVITDTSLHKAYDILETIEWNAYIAYQATVFDKLG  205 (216)
T ss_pred             CCcHHHHHHHHHHHhhcCcccCCCEEEECCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence            6899999999999986322   279999999999999999999999999999999999999988653

>PRK07044 aldolase II superfamily protein; Provisional

Probab=100.00  E-value=2.1e-41  Score=331.40  Aligned_cols=208  Identities=16%  Similarity=0.219  Sum_probs=176.0

Q ss_pred             hccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCC
Q 009774           24 GRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPK  103 (526)
Q Consensus        24 ~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~  103 (526)
                      +.+++++|++|+++||.++++||+.+++||||+|++++     .+.|||||||.++++|+++||++||++|++++|.+ +
T Consensus        11 ~~~~~~~r~~l~~~~r~l~~~Gl~~g~~GNiSvR~~~~-----~~~~lITpsG~~~~~l~~~div~vd~~g~~veg~~-~   84 (252)
T PRK07044         11 SPAEWQARVDLAAAYRLVALLGWDDLIYTHISARVPGE-----EHHFLINPYGLLFDEITASNLVKIDLDGNVVDDSP-Y   84 (252)
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCccccCcEEEEEccCC-----CCeEEEcCCCCChhhcCHHHeEEECCCCCCcCCCC-C
Confidence            45588999999999999999999999999999999752     24799999999999999999999999999998752 2


Q ss_pred             CCCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC--
Q 009774          104 PYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT--  180 (526)
Q Consensus       104 p~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~--  180 (526)
                      |      .+++|+.||+.||+.| ||+||||+||+|++++|++....  .++.+. ... +.|       .||+.+|.  
T Consensus        85 ~------~~pse~~lH~~iY~~rpdv~aViHtH~~~a~a~s~~~~~~--~p~~~~-~~~-~~g-------~i~~~~y~~~  147 (252)
T PRK07044         85 P------VNPAGFTIHSAIHAARPDAHCVMHTHTTAGVAVSAQRDGL--LPLSQH-ALQ-FYG-------RLAYHDYEGI  147 (252)
T ss_pred             C------CChHHhHHHHHHHHhCCCCcEEEEECCHHHHHHHHhCCCC--CcchHh-HHH-HcC-------CceeeCCCCC
Confidence            2      1146999999999999 99999999999999999986432  233333 222 222       38888885  


Q ss_pred             CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 009774          181 AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL  257 (526)
Q Consensus       181 ~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~  257 (526)
                      +.+.++++.+++.|++   .++|||+|||+++||+|+++|+.+++.+|++|++++.++++|.+..+++++..+..+.
T Consensus       148 ~~~~e~~~~va~~l~~---~~avLL~nHGvi~~G~~l~eA~~~~e~lE~~a~~~~~a~~lG~~~~~~~~~~~~~~~~  221 (252)
T PRK07044        148 ALDLDEGERLVADLGD---KPAMLLRNHGLLTVGRTVAEAFLLMYTLERACEIQVAAQAGGGELVLPPPEVAERTAR  221 (252)
T ss_pred             cCCHHHHHHHHHHhcc---CCEEEECCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            3478889999999986   5999999999999999999999999999999999999999998877777766666666

>PRK06208 hypothetical protein; Provisional

Probab=100.00  E-value=1.7e-41  Score=333.19  Aligned_cols=206  Identities=16%  Similarity=0.209  Sum_probs=173.2

Q ss_pred             cHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCC
Q 009774           26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPY  105 (526)
Q Consensus        26 ~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~  105 (526)
                      +.+..|++|++++|.|+++||+.+++||||+|++++     .+.|||||||.++++|+++||++||+||++++|.  +|+
T Consensus        39 ~~~~~~~~l~~~~r~l~~~Gl~~g~~GNIS~R~~~~-----~~~~lITPsG~~~~~lt~eDiv~vd~dG~~v~G~--~ps  111 (274)
T PRK06208         39 ERLHRKQRLAAAFRLFARFGFDEGLAGHITARDPEL-----PDHFWVNPLGVHFSQIKVSDLLLVDHDGEVVEGD--RPL  111 (274)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCccccCceEEEEccCC-----CCeEEEcCCCCChhhCcHHHeEEECCCCCCcCCC--CCC
Confidence            355679999999999999999999999999999752     2489999999999999999999999999999885  441


Q ss_pred             CCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCCC---
Q 009774          106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTA---  181 (526)
Q Consensus       106 ~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~~---  181 (526)
                            .++|+.||..||+.| ||+||+|+||+|++++|+.+..   ++....+.. .+.|       .||++++..   
T Consensus       112 ------~~sE~~lH~~IYr~rpDv~AViHtHpp~ata~s~~~~~---l~~i~~~~~-~~~~-------~ip~~~~~~g~~  174 (274)
T PRK06208        112 ------NRAAFAIHSAIHEARPDVVAAAHTHSTYGKAWSTLGRP---LDPITQDAC-AFYE-------DHALFDDFTGVV  174 (274)
T ss_pred             ------CHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHhCCC---CChhhHHHH-HHcC-------CceeccCCCCcc
Confidence                  146899999999999 9999999999999999998753   333333332 2322       388876533   


Q ss_pred             CchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccccc
Q 009774          182 YENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLGL  259 (526)
Q Consensus       182 ~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~~~  259 (526)
                      ++.++++.+++.|++   .++|||+|||+++||+|+++|+.+++.+|++|++++.++++|.+..+ +++++++.++-+
T Consensus       175 ~s~ela~~va~~l~~---~~avLL~NHGvv~~G~tl~eA~~~~e~lE~aA~i~l~a~~~G~~~~L-~~e~~~~~~~~~  248 (274)
T PRK06208        175 VDTSEGRRIAAALGT---HKAVILQNHGLLTVGPSVDAAAWWFIALERACQTQLLAEAAGPPQPI-DHETARHTRSQV  248 (274)
T ss_pred             CchHHHHHHHHHhcc---CCEEEECCCCceEeeCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcCC-CHHHHHHHHHHh
Confidence            488999999999987   49999999999999999999999999999999999999999977655 455888776633

>PRK07090 class II aldolase/adducin domain protein; Provisional

Probab=100.00  E-value=2.7e-41  Score=330.99  Aligned_cols=206  Identities=18%  Similarity=0.226  Sum_probs=169.7

Q ss_pred             ccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCC
Q 009774           25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP  104 (526)
Q Consensus        25 ~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p  104 (526)
                      .+++.+|++|++++|+++++||+.+++||||+|++++      +.|||||||.++++|+++||++||++|++++|. .+|
T Consensus        26 ~~~~~~r~~l~~~~r~l~~~Gl~~g~~GNiS~R~~~~------~~~lItPsG~~~~~lt~~Div~vd~dG~~v~G~-~kP   98 (260)
T PRK07090         26 DSGWTLRQKLALTCRILFDAGHDSGLAGQITARAEAP------GTYYTQRLGLGFDEITASNLLLVDEDLNVLDGE-GMP   98 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCcccCCceEEEEeCCC------CEEEEeCCCCChhhCCHHHeEEECCCCCCCCCC-CCC
Confidence            3477889999999999999999999999999999763      479999999999999999999999999999986 355


Q ss_pred             CCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCCCCc
Q 009774          105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYE  183 (526)
Q Consensus       105 ~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~~~~  183 (526)
                              |+|+.||..||++| ||+||+|+||||+++||+.+.   +++..++..........+++  .+|.+   |.+
T Consensus        99 --------s~E~~lH~~IYr~rPDv~AVvHtH~p~ata~s~~~~---~l~~~~~~~~~~~~~~~~~~--~~~~i---p~~  162 (260)
T PRK07090         99 --------NPANRFHSWIYRARPDVNCIIHTHPPHVAALSMLEV---PLVVSHMDTCPLYDDCAFLK--DWPGV---PVG  162 (260)
T ss_pred             --------ChhHHHHHHHHHhCCCCCEEEEeCCHHHHHHHhcCC---CCCccchhHHhhccceeecc--CcCCc---CCC
Confidence                    89999999999999 999999999999999999874   34332222111111111111  13333   335


Q ss_pred             hHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 009774          184 NELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL  257 (526)
Q Consensus       184 ~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~  257 (526)
                      .++++.++++|++   .+++||+|||++++|+|+++||.+++.+|++|++++.++++|.+..+++ ++++++.+
T Consensus       163 ~~~a~~va~~l~~---~~avLL~nHGvi~~G~~l~eA~~~~~~LE~~A~i~l~a~~~G~~~~l~~-e~~~~~~~  232 (260)
T PRK07090        163 NEEGEIISAALGD---KRAILLSHHGQLVAGKSIEEACVLALLIERAARLQLLAMAAGPIKPIPP-ELAREAHD  232 (260)
T ss_pred             hHHHHHHHHHhcc---CCEEEECCCCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCH-HHHHHHHH
Confidence            5679999999986   4899999999999999999999999999999999999999998776655 47777755

>TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase

Probab=100.00  E-value=6.2e-41  Score=315.80  Aligned_cols=190  Identities=37%  Similarity=0.720  Sum_probs=165.1

Q ss_pred             HHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCCCCCCCCC
Q 009774           34 ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCS  113 (526)
Q Consensus        34 l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~~~p~~~S  113 (526)
                      |++++|+++++||+.+++||||+|++++       .|||||||.++++|+++||++||++|++++|. .+|        |
T Consensus         1 i~~~~r~l~~~Gl~~~~~GniS~r~~~~-------~~lItpsg~~~~~l~~~di~~v~~~g~~~~g~-~~p--------s   64 (193)
T TIGR03328         1 LIEAGRDLYKRGWVPGTGGNLSARLDED-------EILITPSGVDKGRLTPEDFLVVDLQGKPVSGG-LKP--------S   64 (193)
T ss_pred             CHHHHHHHHHcCCCccCCCEEEEEcCCC-------EEEEeCCCCChhhCCcceEEEEcCCCCCCCCC-CCC--------C
Confidence            5789999999999999999999999764       89999999999999999999999999999875 355        9


Q ss_pred             CchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCC-cccCccceeeecCCCCchHHHHHHH
Q 009774          114 DCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGH-GYYDELVVPIIENTAYENELTDSLA  191 (526)
Q Consensus       114 ~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~vpv~~~~~~~~~la~~i~  191 (526)
                      +|+.+|+.||++| |++||+|+||+|++++|+.......+++..+++++.++|. .|.+...||++++.|++.++++.++
T Consensus        65 ~e~~~H~~iy~~~pdv~aVvH~H~~~a~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~vp~~~~~~gs~ela~~~~  144 (193)
T TIGR03328        65 AETLLHTQLYRLTPGAGAVLHTHSVEATVLSRLYPSNGAFELEGYEMLKALPGITTHEDKLTIPIFENTQDIARLADSVA  144 (193)
T ss_pred             cHHHHHHHHHHhCCCCeEEEEcCCHHHHHHHhhcccCCeeeccchhhhhhhCCCcCCCCceEEeeecCCCChHHHHHHHH
Confidence            9999999999999 9999999999999999988643234666677776655442 1222224999998889999999999


Q ss_pred             HHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHh
Q 009774          192 KAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQ  239 (526)
Q Consensus       192 ~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~  239 (526)
                      ++++++++.++|||+|||+++||+|+++|+.++|.+|++|++.+.++.
T Consensus       145 ~~l~~~~~~~avll~nHGv~~~G~~~~~A~~~~e~lE~~a~~~~~~~~  192 (193)
T TIGR03328       145 PYLEAYPDVPGVLIRGHGLYAWGRDWEEAKRHLEALEFLFECELEMLK  192 (193)
T ss_pred             HHHhcCCCCCEEEEcCCcceEEcCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999765567999999999999999999999999999999999998865

Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine.

>PRK08333 L-fuculose phosphate aldolase; Provisional

Probab=100.00  E-value=7e-41  Score=313.42  Aligned_cols=179  Identities=25%  Similarity=0.326  Sum_probs=158.0

Q ss_pred             HHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCCC
Q 009774           28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPH  107 (526)
Q Consensus        28 ~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~~  107 (526)
                      .++|++|++++|+++++||+.+++||||+|+++        .|||||||.++++++++||++||++|++++|.  +|   
T Consensus         2 ~~~~~~l~~~~~~~~~~gl~~~~~GNiS~R~~~--------~~lItpsG~~~~~l~~~di~~vd~~g~~~~g~--~P---   68 (184)
T PRK08333          2 RNVKAQLVKYSKLAHERGLTAAFGGNLSIRVGN--------LVFIKATGSVMDELTREQVAVIDLNGNQLSSV--RP---   68 (184)
T ss_pred             hHHHHHHHHHHHHHHHCCCCcCCCCeEEEEeCC--------EEEEeCCCCCcccCCHHHEEEECCCCCCCCCC--CC---
Confidence            467999999999999999999999999999976        79999999999999999999999999999874  55   


Q ss_pred             CCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHH-hhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-CCch
Q 009774          108 KPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVT-MINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYEN  184 (526)
Q Consensus       108 ~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~  184 (526)
                           |+|+.+|..|||+| |++||+|+||+|++++| +.+.   .+|....+... +.|       .||++||. +++.
T Consensus        69 -----s~e~~lH~~iyr~rpdv~aViHtH~~~a~a~s~~~~~---~~p~~~~~~~~-~~~-------~v~v~~~~~~g~~  132 (184)
T PRK08333         69 -----SSEYRLHLAVYRNRPDVRAIAHLHPPYSIVASTLLEE---ELPIITPEAEL-YLK-------KIPILPFRPAGSV  132 (184)
T ss_pred             -----ChhHHHHHHHHHhCCCCCEEEeCCcHHHHHHHHHcCC---CCCCccHHHHH-hCC-------CEeeecCCCCCcH
Confidence                 99999999999999 99999999999999999 6553   34433333322 222       39999996 6899


Q ss_pred             HHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHH
Q 009774          185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLH  238 (526)
Q Consensus       185 ~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~  238 (526)
                      ++++.++++|++   .+++||+|||+++||+|+++|+.+++.+|++|++++.+.
T Consensus       133 ~la~~~~~~l~~---~~~vll~nHGv~~~G~~~~eA~~~~e~lE~~A~~~~~~~  183 (184)
T PRK08333        133 ELAEQVAEAMKE---YDAVIMERHGIVTVGRSLREAFYKAELVEESAKLWYLKF  183 (184)
T ss_pred             HHHHHHHHHhcc---CCEEEEcCCCCEEEcCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999986   489999999999999999999999999999999998764

>PRK08660 L-fuculose phosphate aldolase; Provisional

Probab=100.00  E-value=3.2e-40  Score=308.19  Aligned_cols=180  Identities=18%  Similarity=0.297  Sum_probs=156.3

Q ss_pred             HHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCCCCC
Q 009774           30 TRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKP  109 (526)
Q Consensus        30 ~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~~~p  109 (526)
                      .|++|++++|.++++||+.+++||||+|+++        .|||||||.++++|+++|+++||++|+.. +. .+|     
T Consensus         1 ~~~~l~~~~~~l~~~gl~~~~~GniS~R~~~--------~~lItpsg~~~~~l~~~dlv~vd~~g~~~-~~-~~p-----   65 (181)
T PRK08660          1 MWQEFARIGKKLFAHGLVSSHFGNISVRTGD--------GLLITRTGSMLDEITEGDVIEVGIDDDGS-VD-PLA-----   65 (181)
T ss_pred             CHHHHHHHHHHHHHCCCcccCCceeEEEcCC--------EEEEeCCCCCcccCChhHEEEEcCCCCcc-CC-CCC-----
Confidence            3889999999999999999999999999855        89999999999999999999999999875 33 355     


Q ss_pred             CCCCCchHHHHHHHHhcCcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCCCCchHHHHH
Q 009774          110 PKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDS  189 (526)
Q Consensus       110 ~~~S~E~~lH~~iy~~~dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~~~~~~la~~  189 (526)
                         |+|+.||+.||+.+|++||+|+||+|+++||+.+.   .++....+... +.|       .||++...+++.++++.
T Consensus        66 ---s~E~~lH~~iy~~~dv~aVvH~H~~~~~a~s~~~~---~l~~~~~~~~~-~~~-------~ipv~~~~~~~~~la~~  131 (181)
T PRK08660         66 ---SSETPVHRAIYRRTSAKAIVHAHPPYAVALSLLED---EIVPLDSEGLY-FLG-------TIPVVGGDIGSGELAEN  131 (181)
T ss_pred             ---CccHHHHHHHHcCCCCCEEEEeCChHHHHHHHcCC---CCCCcCHHHHH-hcC-------CEeEEeCCCCCHHHHHH
Confidence               99999999999955999999999999999999864   33333333332 222       39998335789999999


Q ss_pred             HHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCC
Q 009774          190 LAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG  241 (526)
Q Consensus       190 i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g  241 (526)
                      ++++|++   .+++||+|||+++||+|+++|+.+++.+|++|++++.+++++
T Consensus       132 v~~~l~~---~~~vll~nHG~~~~G~~i~~A~~~~e~lE~~a~i~~~~~~l~  180 (181)
T PRK08660        132 VARALSE---HKGVVVRGHGTFAIGKTLEEAYIYTSQLEHSCKVLYLVRTAK  180 (181)
T ss_pred             HHHHHhh---CCEEEEcCCCceEeCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999987   499999999999999999999999999999999999998875

>COG0235 AraD Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.7e-40  Score=318.38  Aligned_cols=198  Identities=29%  Similarity=0.449  Sum_probs=172.9

Q ss_pred             hccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCC
Q 009774           24 GRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPK  103 (526)
Q Consensus        24 ~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~  103 (526)
                      .+..++.|++|++++|.++++||+.+++||||+|+++.      ..|+|||||+.|++|+++|+++||+||++++|. .+
T Consensus         2 ~~~~~~~~~~l~~~~~~l~~~g~~~~t~GniS~r~~~~------~~~~ItpsG~~~~~lt~~dlv~vd~~G~~~~g~-~~   74 (219)
T COG0235           2 SMMLEKLRQELAKAARLLARRGLVEGTAGNISVRLPEG------GLFLITPSGVPFGELTADDLVVVDLDGEVVEGG-KK   74 (219)
T ss_pred             chhHHHHHHHHHHHHHHHHHcCCCCcCCceEEEEcCCC------ceEEEeCCCCccccCcHHHeEEEeCCCcEecCC-CC
Confidence            35678999999999999999999999999999999883      349999999999999999999999999999983 45


Q ss_pred             CCCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-C
Q 009774          104 PYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-A  181 (526)
Q Consensus       104 p~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~  181 (526)
                      |        |+|+++|..|||+| |++||+||||+|+++||+.+.   .++..+++....+++       .||+++|. +
T Consensus        75 p--------Sse~~~H~~iY~~rpd~~aVvHtHs~~a~als~~~~---~l~~~~~~~~~~~~~-------~i~~~~~~~~  136 (219)
T COG0235          75 P--------SSETPIHLAIYRARPDAGAVVHTHSPYATALSTLGE---PLPPLGTEHLKYFGG-------GIPCAPYAGP  136 (219)
T ss_pred             C--------chhHHHHHHHHHhCCCCCEEEecCcHHHHHHHHhcC---CCCCCCHHHHHHcCC-------CcccccCCCC
Confidence            5        99999999999999 999999999999999999984   555556666666554       39999985 5


Q ss_pred             CchHHHHHHHHHHhhCCCCeEE--EEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCC
Q 009774          182 YENELTDSLAKAIDAYPKATAV--LVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNH  249 (526)
Q Consensus       182 ~~~~la~~i~~~l~~~~~~~~v--ll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~  249 (526)
                      ++.+++++++..+...   +.+  ||+|||+++||+|+.+|+.+++.+|++|+++++++++|.+....++
T Consensus       137 ~~~~~~~~~~~~~~~~---~~~~~ll~~HG~~~~G~~l~eA~~~~~~lE~~a~~~~~~~~~~~~~~~~~~  203 (219)
T COG0235         137 GSVELAEALAEAADLA---EAVLKLLRNHGVVAWGKTLAEAVHLAEVLEELAKLQLKALSLGKPLLTAPD  203 (219)
T ss_pred             CchhhHHHHHHHHHHH---HHHHHHHHcCCcEEECCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCH
Confidence            7888888888777652   444  5999999999999999999999999999999999999998763333

>PRK03634 rhamnulose-1-phosphate aldolase; Provisional

Probab=100.00  E-value=4.2e-40  Score=324.67  Aligned_cols=215  Identities=15%  Similarity=0.193  Sum_probs=169.1

Q ss_pred             hccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCC---------------------CCccEEEEeccCCCCCCC
Q 009774           24 GRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIP---------------------KPQQLILMSPSGVQKERM   82 (526)
Q Consensus        24 ~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~---------------------~~~~~~litpsG~~~~~l   82 (526)
                      ++...+.+++|++++|+++++||+.+++||||+|++++++.                     ..++.|||||||.++++|
T Consensus         3 ~~~~~~~~~~l~~~~~~l~~~Gl~~~~~GNiSvR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lITpSG~~~~~l   82 (274)
T PRK03634          3 NILDSWFVQGMIKVTSDLWLKGWDERNGGNISLRLTEEEVAPYGDDFHQQPRYIPLSQPMPELAGTYFLVTGSGKFFRNV   82 (274)
T ss_pred             chhhHHHHHHHHHHHHHHHHcCCccCCCCeEEEEcCchhhhhhhhccccccccccccccchhccCCEEEEeCCCcChhhh
Confidence            34456789999999999999999999999999999772110                     002489999999999999


Q ss_pred             --CCC-C--EEEEeCCCCccc---C--CCCCCCCCCCCCCCCchHHHHHHH----Hh-c-CcceEEecCChHHHHHHhhc
Q 009774           83 --EPE-D--MYVLSGNGTTLS---S--PSPKPYPHKPPKCSDCAPLFMKAY----EK-R-DAGAVIHSHGIESCLVTMIN  146 (526)
Q Consensus        83 --~~~-d--iv~vd~dg~~~~---g--~~~~p~~~~p~~~S~E~~lH~~iy----~~-~-dv~aVvH~H~~~~~a~a~~~  146 (526)
                        +|+ |  +++||.+|++++   |  .+.+|        |+|+.||+.||    +. | |++||+|+||+|++++|+.+
T Consensus        83 ~~~p~dd~~lv~vd~~G~~~~~~~g~~~~~kP--------SsE~~lH~~IY~~~~~~~rpdv~AVvHtHs~~atals~~~  154 (274)
T PRK03634         83 QLDPAANLGVIRIDSDGAGYHILWGLTNGGKP--------TSELPAHLMSHIARLKATNGKDRVIMHCHATNLIALTYVL  154 (274)
T ss_pred             hcCchhcCCEEEEcCCCCEeeeeccCCCCCCC--------chHHHHHHHHHHHHhhccCCCCcEEEecCchHHHHHHCcC
Confidence              555 5  678899998753   3  12244        99999999999    45 8 99999999999999999986


Q ss_pred             CCCC--cccccH----HHHHhhhcCCcccCccceeeecCC-CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHH
Q 009774          147 PMSK--EFRITH----MEMIKGIKGHGYYDELVVPIIENT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWIN  219 (526)
Q Consensus       147 ~~~~--~~~~~~----~~~~~~~~g~~~~~~~~vpv~~~~-~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~e  219 (526)
                      . .+  .+....    .+....+++       .||++||. |++.++++++++++++   .++|||+|||+++||+|+++
T Consensus       155 ~-l~~~~~~~~~~~~~~e~~~~~~~-------~i~vvpy~~pgs~eLa~~v~~~l~~---~~avLL~nHGvv~~G~~l~e  223 (274)
T PRK03634        155 E-LDEAVFTRTLWEMSTECLVVFPD-------GVGIVPWMVPGTDEIGQATAEKMQK---HDLVLWPKHGVFGSGPTLDE  223 (274)
T ss_pred             C-cChHhhhhhhhhcCccceeEeCC-------ceeEecCCCCCCHHHHHHHHHHhcc---CCEEEEcCCCCeEecCCHHH
Confidence            4 11  110000    111111111       39999995 6999999999999986   48999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 009774          220 AKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL  257 (526)
Q Consensus       220 A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~  257 (526)
                      |+.+++.+|++|++++.++++|+.....+++++++++.
T Consensus       224 A~~~~e~lE~~a~i~l~a~~~G~~~~~l~~e~l~~l~~  261 (274)
T PRK03634        224 AFGLIDTAEKSAEIYVKVLSMGGMKQTITDEELIALGE  261 (274)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            99999999999999999999996444455568888755

>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase

Probab=100.00  E-value=5.1e-40  Score=322.40  Aligned_cols=212  Identities=17%  Similarity=0.210  Sum_probs=171.1

Q ss_pred             HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCC--------------------CCCccEEEEeccCCCCCCCCC--
Q 009774           27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSI--------------------PKPQQLILMSPSGVQKERMEP--   84 (526)
Q Consensus        27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~--------------------~~~~~~~litpsG~~~~~l~~--   84 (526)
                      ...++++|++++++|+++||+.+++||||+|++++++                    .-.+++|+|||||.++++|++  
T Consensus         6 ~~~~~~~i~~~~~~l~~~Gl~~~~~GNiS~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lITpSG~~~~~l~~~~   85 (270)
T TIGR02624         6 DSPFVQEMIKTTSDLWRLGWDERNGGNISLRLDEEEVAPYLDFHQVPRKIPLKFPAPELANKYFLVTGSGKFFRNVEENP   85 (270)
T ss_pred             cHHHHHHHHHHHHHHHHcCCcCCCCCEEEEEcCccccchhhcccccccccccccccccccCCEEEEeCCCCCHHhcccCc
Confidence            3568999999999999999999999999999976200                    000248999999999999994  


Q ss_pred             -CCE--EEEeCCCCccc------CCCCCCCCCCCCCCCCchHHHHH----HHHhc-CcceEEecCChHHHHHHhhcCCC-
Q 009774           85 -EDM--YVLSGNGTTLS------SPSPKPYPHKPPKCSDCAPLFMK----AYEKR-DAGAVIHSHGIESCLVTMINPMS-  149 (526)
Q Consensus        85 -~di--v~vd~dg~~~~------g~~~~p~~~~p~~~S~E~~lH~~----iy~~~-dv~aVvH~H~~~~~a~a~~~~~~-  149 (526)
                       +|+  ++||.+|++++      ++ .||        |+|+.||+.    ||+.| |++||+|+||+|++++|++.... 
T Consensus        86 ~~d~~iv~vd~~G~~~~~~~~~~~g-~kP--------SsE~~mH~~v~~~iy~~rpd~~AVvHtHp~~ata~s~~~~~~~  156 (270)
T TIGR02624        86 AENLGILRVSEDGASVHLLWGLTDG-GVP--------TSELPAHFMSHIARLKVDPENRVIMHCHATNLIAMTFTHELDE  156 (270)
T ss_pred             hhceeEEEECCCCCEEEeeccccCC-CCc--------ChHHHHHHHHHHHHHHhCCCCCEEEccCcHHHHHHHccCcccc
Confidence             685  56899999986      33 355        999999986    69999 99999999999999999986411 


Q ss_pred             Cc----ccccHHHHHhhhcCCcccCccceeeecCC-CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHH
Q 009774          150 KE----FRITHMEMIKGIKGHGYYDELVVPIIENT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQA  224 (526)
Q Consensus       150 ~~----~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~  224 (526)
                      ..    ++....++...+++       .||++||. |++.++++.+++.+++   .++|||+|||+++||+|+++|+.++
T Consensus       157 ~~~~~~l~~~~~e~~~~~~~-------~i~vvp~~~pGs~eLA~~v~~~l~~---~~avLL~nHGvva~G~~l~eA~~~~  226 (270)
T TIGR02624       157 AVFTRTLWQMCTECLVVFPD-------GVGIIPWMVPGTNEIGEATAEKMKE---HRLVLWPHHGIFGAGPSLDETFGLI  226 (270)
T ss_pred             hhccccccccccchhheeCC-------ccccccCcCCCCHHHHHHHHHHhcc---CCEEEEcCCCCeEecCCHHHHHHHH
Confidence            11    11111122222322       39999995 7999999999999987   4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 009774          225 ECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL  257 (526)
Q Consensus       225 ~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~  257 (526)
                      |.+|++|++++.++.+|++....+++++++++.
T Consensus       227 E~lE~~A~i~~~a~~lg~~~~~L~~e~l~~~~~  259 (270)
T TIGR02624       227 ETAEKSAEVYTKVYSQGGVKQTISDEQLIALAK  259 (270)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            999999999999999997755566668887755

Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.

>PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus

Probab=100.00  E-value=9.3e-39  Score=299.94  Aligned_cols=178  Identities=34%  Similarity=0.554  Sum_probs=150.3

Q ss_pred             HHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCC-CCcccC-C-CCCCCCCC
Q 009774           32 VLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN-GTTLSS-P-SPKPYPHK  108 (526)
Q Consensus        32 ~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~d-g~~~~g-~-~~~p~~~~  108 (526)
                      ++|++++|+++++||+.+++||||+|++++       .|||||||.++++++++||++||+| |++++| . ..+|    
T Consensus         1 ~~l~~~~r~l~~~g~~~~~~GniS~R~~~~-------~~lit~sg~~~~~l~~~d~~~v~~~~g~~l~g~~~~~~p----   69 (184)
T PF00596_consen    1 QELAEACRRLYERGLVDGTGGNISVRVPGD-------RFLITPSGVDKDELTPEDIVVVDLDDGNILEGDEGGGKP----   69 (184)
T ss_dssp             HHHHHHHHHHHHTTSSCTTBEEEEEEECTT-------EEEEEBTTS-GGGCTGGGEEEEETTTSEEEEESTTSSCB----
T ss_pred             CHHHHHHHHHHHCCCcccCCCeEEEEecCC-------CEEEcCCCCChhhCChhhceEEeccccceeeccCCCCCC----
Confidence            689999999999999999999999999874       9999999999999999999999999 999965 1 2234    


Q ss_pred             CCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhh-cCCCCcccccHHHHHhhhcCCcccCccceeeecCC-CCchH
Q 009774          109 PPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMI-NPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYENE  185 (526)
Q Consensus       109 p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~~  185 (526)
                          |+|+.+|..||++| |++||+|+||+++++||++ +.   +++...++....+.+      ..||+++|. +++.+
T Consensus        70 ----s~e~~lH~~iy~~rpdv~aViH~H~~~~~a~s~~~~~---~l~~~~~~~~~~~~~------~~v~~~~~~~~~~~~  136 (184)
T PF00596_consen   70 ----SSETPLHAAIYRARPDVNAVIHTHPPYATALSCLAGE---PLPPITQEAARFYFG------GEVPVVPYAPPGSEE  136 (184)
T ss_dssp             ----CTTHHHHHHHHHHCTTSSEEEEE--HHHHHHHTSSTC---CCCSSSHHHHHTHTS------SCEEEE-THSTTCHH
T ss_pred             ----CHhHHHHhHHHcCCCCCCEEEecChHHHHhHHhhhhc---ccccchhhHHhhhcC------ccceeeccccccchh
Confidence                99999999999999 9999999999999999988 65   333333444432211      149999995 58899


Q ss_pred             HHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHH
Q 009774          186 LTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAI  235 (526)
Q Consensus       186 la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~  235 (526)
                      +++.+++.|+.  +.+++||+|||+++||+|+++|+.+++.+|++||+++
T Consensus       137 l~~~i~~~l~~--~~~~vll~nHG~~~~G~s~~~A~~~~~~lE~~a~~~l  184 (184)
T PF00596_consen  137 LAEAIAEALGE--DRKAVLLRNHGVVVWGKSLEEAFYRAEYLERAAEIQL  184 (184)
T ss_dssp             HHHHHHHHHTC--TSSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhcC--CceEEeecCCceEEEeCCHHHHHHHHHHHHHHHHHhC
Confidence            99999999982  3699999999999999999999999999999999986

These proteins form part of a family that includes: rhamnulose-1-phosphate aldolase (4.1.2.19 from EC), L-fuculose phosphate aldolase (4.1.2.17 from EC) [, ] that is involved in the third step in fucose metabolism, L-ribulose- 5-phosphate 4-epimerase (5.1.3.4 from EC) involved in the third step of L-arabinose catabolism, a probable sugar isomerase SgbE, hypothetical proteins and the metazoan adducins which have not been ascribed any enzymatic function but which play a role in cell membrane cytoskeleton organisation. Adducins are members of the Ig superfamily and encode cell surface sialoglycoproteins expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell adhesion and signal transduction, and may play a role in the development of artherosclerosis and rheumatoid arthritis. Adducin is a cell-membrane skeletal protein that was first purified from human erythrocytes and subsequently isolated from bovine brain membranes. Isoforms of this protein have been detected in lung, kidney, testes and liver. Erythrocyte adducin is a 200kDa heterodimer protein, composed of alpha and beta subunits, present at about 30,000 copies per cell. It binds with high affinity to Ca(2+)/calmodulin and is a substrate for protein kinases A and C. Both alpha-adducin and beta-adducin show alternative splicing. Thus, there may be several different heterodimeric or homodimeric forms of adducin, each with a different functional specificity. It is thought to play a role in assembly of the spectrin-actin lattice that underlies the plasma membrane []. Missense mutations in both the alpha- and beta-adducin genes that alter amino acids that are normally phosphorylated have been associated with the regulation of blood pressure in the Milan hypertensive strain (MHS) of rats. Gamma adducin was isolated from human foetal brain []. It shows a high degree of similarity to the alpha and beta adducins.; GO: 0046872 metal ion binding; PDB: 2V9N_B 1GT7_B 2V9O_E 2V9M_B 2V9F_A 2UYV_A 1OJR_A 2V9G_C 2V29_B 2V9I_A ....

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=100.00  E-value=8.4e-33  Score=264.70  Aligned_cols=218  Identities=43%  Similarity=0.740  Sum_probs=186.9

Q ss_pred             ceEEEEeccccccccccccccchhhHHhhHHhhhhhhcCChhhHHHHHHHHHHhHHhhhhccCCccCCCCCCCchHHHHH
Q 009774          284 PRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIA  363 (526)
Q Consensus       284 ikaVlFD~DGTL~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (526)
                      +++|+||+.||+++.+|+++.+|||+++++..|+..+|..+    .++.++...               .. ...    +
T Consensus         1 ~~~~l~diegt~~~isfv~~~lfpy~~~~~~~~l~~~~~~~----~~~~~~~~~---------------~~-~~~----~   56 (220)
T TIGR01691         1 IKNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYEST----IVENLRELG---------------KT-PEE----L   56 (220)
T ss_pred             CCEEEEecCCCcccHHHHHhhhhHHHHHHHHHHHHHhCCCH----HHHHHHHhc---------------cC-CcH----H
Confidence            68999999999999999999999999999999999888655    344444321               10 111    4


Q ss_pred             HHHHHHHHHHhhhhcchhhHhhhHHHHHHhhhcccccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCC
Q 009774          364 ALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGD  443 (526)
Q Consensus       364 ~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~g  443 (526)
                      .+..++..|+..+++.+.+|++++..|+++|.....+.++|||+.++|++|+++|++++|+||++...++..+++...++
T Consensus        57 ~~~~~~~~~~~~d~k~~~lk~lqg~iw~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~  136 (220)
T TIGR01691        57 ILLRKLHAEMDKDRKATPLKTLQGLIWRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGN  136 (220)
T ss_pred             HHHHHHHHHHHcCCCcchHHHHHHHHHHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccc
Confidence            56666777999999999999999999999999888888999999999999999999999999999999998888875557


Q ss_pred             cccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCC-CC-CeEec
Q 009774          444 LRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPEN-HG-FKTIN  521 (526)
Q Consensus       444 l~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~-~~-~~~i~  521 (526)
                      +.++|+.+++...+.||+|++|.++++++|++ |++|+||||+..|+++|+++||.++++.|+++.+..+. .+ +..|+
T Consensus       137 L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~~~~~~~~~~~~~~~~  215 (220)
T TIGR01691       137 LTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTGQLVRPGNDPVVDPSFPVYPQFP  215 (220)
T ss_pred             hhhhcceEEEeCcccCCCHHHHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEEEEECCCCCCCCcccCCCCCeec
Confidence            88899999876667899999999999999997 99999999999999999999999999999976543332 22 78899


Q ss_pred             CCCCC
Q 009774          522 SFAEI  526 (526)
Q Consensus       522 ~l~eL  526 (526)
                      ||+++
T Consensus       216 ~~~~~  220 (220)
T TIGR01691       216 DLNAV  220 (220)
T ss_pred             CcccC
Confidence            99874

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>KOG2631 consensus Class II aldolase/adducin N-terminal domain protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.7e-32  Score=246.40  Aligned_cols=210  Identities=58%  Similarity=1.001  Sum_probs=192.8

Q ss_pred             HHhhccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCC
Q 009774           21 YLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSP  100 (526)
Q Consensus        21 ~~~~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~  100 (526)
                      ++.+++.+..+.-+.++||.+|..||+.|+||-||+|.++        .++|.|||+.++.++|+|++++|+.++.++.+
T Consensus        11 ~i~~~~~~~p~~Li~eLc~qFY~lgWvtGTGgai~ik~~~--------ei~iaPSgVQKErm~peDlfv~~~~~~~~~~P   82 (238)
T KOG2631|consen   11 RIGSMDLEHPRNLICELCRQFYHLGWVTGTGGAISIKHGD--------EIYIAPSGVQKERMQPEDLFVMDLNTEYISVP   82 (238)
T ss_pred             cccCCCccchHHHHHHHHHHHHhcCceeccCCeEEEeeCC--------eeEeCcchhhhhhCCccceEEEecCCceeccC
Confidence            5778888999999999999999999999999999999988        69999999999999999999999999777643


Q ss_pred             CCCCCCCCCCCCCCchHHHHHHHHhcCcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcC--Cc----ccCccce
Q 009774          101 SPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKG--HG----YYDELVV  174 (526)
Q Consensus       101 ~~~p~~~~p~~~S~E~~lH~~iy~~~dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g--~~----~~~~~~v  174 (526)
                          +..+++++|..+++...+|..|+++||||||+..|+..+++.. ...+.+++.||++++.+  .+    |++...|
T Consensus        83 ----~~~k~~k~s~CtpLF~~~y~~r~AgAvIHTHS~~Avl~t~L~~-~~~F~ith~EmIKgI~~~~~g~~~~y~D~L~v  157 (238)
T KOG2631|consen   83 ----KPSKKLKPSQCTPLFMAAYTMRDAGAVIHTHSQAAVLATLLFP-SDEFRITHQEMIKGIPKGNSGGYLPYFDTLVV  157 (238)
T ss_pred             ----CCcCCCCccccHHHHHHHHHhcCCceEEEeccHHHHHHHhhcc-cceeEeehHHHHhcCCCCCCCccccccceEEE
Confidence                3345667799999999999999999999999999999999875 46889999999998865  33    7777889


Q ss_pred             eeecCCCCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 009774          175 PIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD  243 (526)
Q Consensus       175 pv~~~~~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~  243 (526)
                      |++++.|...+|.+.+.+++..+|+.-+||.||||+++||+|.+.|--.+|..|...++++....+|-+
T Consensus       158 PIIeNt~~E~~L~D~l~~aie~YP~tcAVLVR~HGvyvWG~TWekaKt~~EcydYLfelaikm~klgip  226 (238)
T KOG2631|consen  158 PIIENTPSESDLKDSLKKAIELYPDTCAVLVRRHGVYVWGPTWEKAKTMTECYDYLFELAIKMKKLGIP  226 (238)
T ss_pred             eeecCCchHHHHHHHHHHHHHhCCcceEEEEecCcEEEecCcHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999977

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=99.96  E-value=9.5e-28  Score=212.43  Aligned_cols=222  Identities=43%  Similarity=0.761  Sum_probs=200.8

Q ss_pred             CceEEEEeccccccccccccccchhhHHhhHHhhhhhhcCChhhHHHHHHHHHHhHHhhhhccCCccCCCCCCCchHHHH
Q 009774          283 FPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVI  362 (526)
Q Consensus       283 ~ikaVlFD~DGTL~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (526)
                      |+|+|+.|+.||....+|+.+.+|||+.+.+.+|+.+++..+++..++......+..               ....    
T Consensus         3 m~kaiLlDIEGTv~~iSFVkdvlFPYa~~~lp~fv~e~~e~~~v~~~v~~v~~e~g~---------------~~s~----   63 (229)
T COG4229           3 MVKAILLDIEGTVSPISFVKDVLFPYAARKLPDFVRENTEDSEVKKIVDEVLSEFGI---------------ANSE----   63 (229)
T ss_pred             chhhheeeccccccchhHHHhhhhHHHHHHhHHHHHhhccCChhhHHHHHHHHHhCc---------------cchH----
Confidence            569999999999999999999999999999999999999988877777776665321               1113    


Q ss_pred             HHHHHHHHHHHhhhhcchhhHhhhHHHHHHhhhcccccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCC
Q 009774          363 AALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYG  442 (526)
Q Consensus       363 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~  442 (526)
                      +.+...+..|+..+.+.+.+|++++..|..+|+......++||++.+.|+++++.|.+++|.|+++...+...+.+...+
T Consensus        64 E~lva~~~~wiaed~K~t~lK~lQG~iWa~Gy~sgelkahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~ag  143 (229)
T COG4229          64 EALVALLLEWIAEDSKDTPLKALQGMIWAHGYESGELKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAG  143 (229)
T ss_pred             HHHHHHHHHHHhcccccchHHHHHhHHHHhccccCccccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccc
Confidence            44555555689999999999999999999999999999999999999999999999999999999999999999999888


Q ss_pred             CcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecC
Q 009774          443 DLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS  522 (526)
Q Consensus       443 gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~  522 (526)
                      +|..+|+.+||+..+.|.....|.+++..+|++ |.+++|+.|.+..+++|+.+||.++.+.|+|+.+..+..++.+++|
T Consensus       144 dL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~-p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d~~~~~~~~s  222 (229)
T COG4229         144 DLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLP-PAEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPDGQGFLVYKS  222 (229)
T ss_pred             cHHhhhcceeeccccccccchhHHHHHHhcCCC-chheEEecCCHHHHHHHHhcchheeeeecCCCCCCCCCcCceeeec
Confidence            999999999999889999999999999999996 9999999999999999999999999999998888877667888888


Q ss_pred             CC
Q 009774          523 FA  524 (526)
Q Consensus       523 l~  524 (526)
                      |.
T Consensus       223 f~  224 (229)
T COG4229         223 FE  224 (229)
T ss_pred             hh
Confidence            76

>PRK08324 short chain dehydrogenase; Validated

Probab=99.95  E-value=2.4e-28  Score=272.75  Aligned_cols=198  Identities=17%  Similarity=0.132  Sum_probs=152.1

Q ss_pred             HHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCC-CCCccEEEEeccCCCCCCCCCCCEEEEeCCC------------
Q 009774           28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSI-PKPQQLILMSPSGVQKERMEPEDMYVLSGNG------------   94 (526)
Q Consensus        28 ~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~-~~~~~~~litpsG~~~~~l~~~div~vd~dg------------   94 (526)
                      +++++.+....+...+.||+.+++||+|+|+.+.++ ..+.+.|||||||.++++|+++||+.||+++            
T Consensus        14 ~~~~~~v~~~~~l~~~~~l~~~~gGN~S~k~~~~~~~g~~~~~~~it~SG~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~   93 (681)
T PRK08324         14 DELALLVYRSRLLGADPRLVNHGGGNTSVKTTETDLTGEPVEVLWVKGSGGDLATITAAGFAALRLDPLRALKELGVLSD   93 (681)
T ss_pred             cHHHHHHHHHHHhCCCHHHhccCCceeeeeeeccccCCCeeeEEEEECCccChhhccccCCCeeeHHHHHhhhccCCcch
Confidence            456666666666667777999999999999854211 1123479999999999999999999999874            


Q ss_pred             ----------CcccCCCCCCCCCCCCCCCCchHHHHHHHHhcCcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhc
Q 009774           95 ----------TTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIK  164 (526)
Q Consensus        95 ----------~~~~g~~~~p~~~~p~~~S~E~~lH~~iy~~~dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~  164 (526)
                                ....+. .        +||+|+.||+.||+    ++|+||||+|++++|++...   +++... .   ++
T Consensus        94 ~~~~~~~~~~~~~~~~-~--------~pS~e~~lH~~i~~----~~V~HtH~~~~~a~s~~~~~---~~~~~~-~---~~  153 (681)
T PRK08324         94 DEMVAYLRHCLFDPNA-P--------APSIETLLHAFLPF----KHVDHTHPDAIIAIANAPDG---EELTRE-I---FG  153 (681)
T ss_pred             HHHHHHHHhhccCCCC-C--------CCchhHHHHhhcCC----CEEEecCchHHHHHHcCCCH---HHHHHH-H---cC
Confidence                      222221 2        33999999999986    56999999999999998632   222111 1   22


Q ss_pred             CCcccCccceeeecCC-CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhC--C
Q 009774          165 GHGYYDELVVPIIENT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL--G  241 (526)
Q Consensus       165 g~~~~~~~~vpv~~~~-~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~--g  241 (526)
                      +       .|+++||. |+ .++++.+.+.++..++.+++||+|||+++||+|+.+||.+++.+|++|++++.+++.  |
T Consensus       154 ~-------~v~~~py~~pg-~~l~~~~~~~~~~~~~~~~~lL~nHG~~~~G~~~~eA~~~~~~~e~~a~~~~~a~~~~~g  225 (681)
T PRK08324        154 D-------RVGWVPYVRPG-FDLALAIAEAVRANPGAEGVVLGKHGLFTWGDTAKEAYERTIEIITRAEEYIEARGAGFG  225 (681)
T ss_pred             C-------ceEEcCccCCC-hHHHHHHHHHHHhCCCCcEEEECCCCCeeccCCHHHHHHHHHHHHHHHHHHHHHhccccC
Confidence            2       39999996 55 789999999998876789999999999999999999999999999999999999987  5


Q ss_pred             CCC-CCCCCCccc
Q 009774          242 LDW-STPNHGPTR  253 (526)
Q Consensus       242 ~~~-~~~~~~~~~  253 (526)
                      ++. ...++++.+
T Consensus       226 ~~~~~~l~~~~~~  238 (681)
T PRK08324        226 GAVYEALPAPERR  238 (681)
T ss_pred             CccccCCCchhHH
Confidence            543 233343443

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.95  E-value=3.9e-27  Score=231.57  Aligned_cols=122  Identities=16%  Similarity=0.157  Sum_probs=109.5

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|+++|++++|+||++...++..++++   ++.++|+.++  ++....||+|++|++++++++++ |
T Consensus       106 ~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~---gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~-~  181 (248)
T PLN02770        106 QLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLL---GLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVS-K  181 (248)
T ss_pred             cCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc---CChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCC-h
Confidence            4579999999999999999999999999999999999999   9999999988  55677899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCC-CCCCCeEecCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLP-ENHGFKTINSFAE  525 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~-~~~~~~~i~~l~e  525 (526)
                      ++|+||||+..|+++|+++|+.+|++.++.....+ ...++++++++.|
T Consensus       182 ~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e  230 (248)
T PLN02770        182 DHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYED  230 (248)
T ss_pred             hHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchh
Confidence            99999999999999999999999999987433322 2345899999876

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.95  E-value=1.1e-27  Score=266.33  Aligned_cols=184  Identities=17%  Similarity=0.096  Sum_probs=148.7

Q ss_pred             HHHHHHHHHHHHHcCCccccCCceEEEeCCC-CC-CCCccEEEEeccCCCCCCCCCCCEEEEeCCC--------------
Q 009774           31 RVLISELCRHFYTLGWVSGTGGSITIKVHDD-SI-PKPQQLILMSPSGVQKERMEPEDMYVLSGNG--------------   94 (526)
Q Consensus        31 r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~-~~-~~~~~~~litpsG~~~~~l~~~div~vd~dg--------------   94 (526)
                      ++.+...+++.+++||+.+++||+|+|+.++ |+ ..+.+.|||||||.++++|+++||+.||+++              
T Consensus         2 ~~~v~~s~~~g~~~~l~~~~gGN~Svk~~~~~~~~g~~~~~~~I~~SG~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~   81 (676)
T TIGR02632         2 AELVYRSNLLGADRRITNYGGGNTSAKTTETDPLTGGEVEVMWVKGSGGDLGTMTAANFAGLRLDKLRPLKERYPGVETE   81 (676)
T ss_pred             HHHHHHHHHhCCCHHHhccCCccceeeccccCCCcCceeeEEEEECCccCHhhccccCCceEechHHHHHhhhccccCCH
Confidence            5678888899999999999999999998652 11 0111269999999999999999999999985              


Q ss_pred             ----------CcccCCCCCCCCCCCCCCCCchHHHHHHHHhcCcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhc
Q 009774           95 ----------TTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIK  164 (526)
Q Consensus        95 ----------~~~~g~~~~p~~~~p~~~S~E~~lH~~iy~~~dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~  164 (526)
                                .+.++. .+        ||+|+.||+.||.    ++|.||||++++++++....   .+     +.+.+.
T Consensus        82 ~~~v~~~~~~~~~~~~-~~--------PS~Et~lH~~i~~----~~v~HtH~~~~~a~a~~~~~---~~-----~~~~~~  140 (676)
T TIGR02632        82 DEMVAYLPHCLFNLNG-RA--------PSIDTPLHAFVPF----KHVDHMHPDAIIALACAENG---RE-----LTEEIF  140 (676)
T ss_pred             HHHHHHHHhcccCCCC-CC--------CCccHHHHhhccc----ceEEecCchHHHHHhcCccH---HH-----HHHHHc
Confidence                      223332 23        3999999999975    56889999999999987531   22     222222


Q ss_pred             CCcccCccceeeecCC-CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 009774          165 GHGYYDELVVPIIENT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL  242 (526)
Q Consensus       165 g~~~~~~~~vpv~~~~-~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~  242 (526)
                      |.      .|+++||. |+ .+|++.+.+.++.+++.++|||+|||+++||+|+++|+.+++.+|+.|++++.+..+|.
T Consensus       141 g~------~v~~vpy~~pG-~~La~~~~~~~~~~~~~~~vll~~HGl~~~G~~~~eA~~~~~~~e~~a~~~~~~~~~g~  212 (676)
T TIGR02632       141 GD------EVVWVPWRRPG-FQLGLDIAAQVDANPQAKGVVLEGHGLVVWGDTAKECYERTLSIINEAEQFIEEKRGGE  212 (676)
T ss_pred             CC------eEEEeccccCC-hHHHHHHHHHHHhCCCCcEEEEcCCCeEEecCCHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            21      38999996 55 57999999999877667899999999999999999999999999999999999999876

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.94  E-value=2.7e-26  Score=221.51  Aligned_cols=123  Identities=27%  Similarity=0.309  Sum_probs=111.5

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...+|||+.++|..|+++|++++|+||++....+..++++   |+.++|+.++  ++....||+|..+..++++++++ |
T Consensus        87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~---gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~-~  162 (220)
T COG0546          87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKAL---GLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLD-P  162 (220)
T ss_pred             cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHh---CCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCC-h
Confidence            4579999999999999999999999999999999999999   9999999999  55788999999999999999998 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCCC-CCCCCC-CCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLPEN-HGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~-~~~~~~-~~~~~i~~l~eL  526 (526)
                      ++++||||+.+|+.+|++||+.+|++.|+.. ...... .++.+++++.||
T Consensus       163 ~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el  213 (220)
T COG0546         163 EEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAEL  213 (220)
T ss_pred             hheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHH
Confidence            9999999999999999999999999999853 333333 359999998774

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.94  E-value=1.6e-25  Score=216.18  Aligned_cols=123  Identities=19%  Similarity=0.222  Sum_probs=108.3

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      .+.++||+.++|+.|+++|++++|+||++...+...++++   |+..+|+.++  ++.+..||+|++|+++++++|++ |
T Consensus        92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~-~  167 (221)
T TIGR02253        92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERL---GVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVK-P  167 (221)
T ss_pred             hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhC---ChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCC-h
Confidence            3579999999999999999999999999999999999999   9999999988  45777899999999999999997 9


Q ss_pred             CcEEEEecCH-hhHHHHHHcCCcEEEEeCCCCCC-C-C-CCCCCeEecCCCCC
Q 009774          478 SEILFVTDVY-QEATAAKAAGLEVVISIRPGNGP-L-P-ENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~~-~-~-~~~~~~~i~~l~eL  526 (526)
                      ++|+||||++ +|+.+|+++|+.+|++.++.... . . ...++++|+++.||
T Consensus       168 ~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el  220 (221)
T TIGR02253       168 EEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL  220 (221)
T ss_pred             hhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence            9999999998 89999999999999999874322 1 1 22347899998875

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.94  E-value=7.1e-26  Score=220.03  Aligned_cols=123  Identities=20%  Similarity=0.246  Sum_probs=108.0

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ..+++||+.++|+.|+++|++++|+||++......+++++   ++..+|+.++  +.....||+|++|+++++++|++ |
T Consensus        93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~-p  168 (229)
T PRK13226         93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQL---GWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVA-P  168 (229)
T ss_pred             cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCC-h
Confidence            3579999999999999999999999999999999999999   9999999887  34567899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCCC-CC-CC-CCCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPGN-GP-LP-ENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~-~~-~~-~~~~~~~i~~l~eL  526 (526)
                      ++|+||||+.+|+.+|+++|+.+|++.++.. .. .. ...++++++++.||
T Consensus       169 ~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el  220 (229)
T PRK13226        169 TDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLL  220 (229)
T ss_pred             hhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHH
Confidence            9999999999999999999999999999832 22 22 23358999988764

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.94  E-value=4.6e-26  Score=219.00  Aligned_cols=123  Identities=17%  Similarity=0.179  Sum_probs=109.2

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      .+.++||+.++|+.|+++|++++|+||++...++.+++.+   |+.++|+.++  ++....||+|++|++++++++++ |
T Consensus        80 ~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~-~  155 (214)
T PRK13288         80 LVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLT---GLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAK-P  155 (214)
T ss_pred             hcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCC-H
Confidence            4579999999999999999999999999999999999999   9999999998  45677899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCC-CCCCC-CCCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPG-NGPLP-ENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~-~~~~~-~~~~~~~i~~l~eL  526 (526)
                      ++|+||||+.+|+.+|+++|+.+|++.|+. ..... +..++++++++.|+
T Consensus       156 ~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l  206 (214)
T PRK13288        156 EEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDL  206 (214)
T ss_pred             HHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHH
Confidence            999999999999999999999999999983 33322 23357889988764

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.93  E-value=1.7e-25  Score=220.72  Aligned_cols=122  Identities=10%  Similarity=0.081  Sum_probs=107.3

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ..+++||+.++|+.|+++|++++|+||++...++.+++++   |+.++|+.++  ++....||+|++|+++++++|++ |
T Consensus       107 ~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~---gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~-p  182 (260)
T PLN03243        107 LYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAV---GMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFI-P  182 (260)
T ss_pred             CcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHc---CCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCC-h
Confidence            3578999999999999999999999999999999999999   9999999998  45667899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      ++|+||||+..|+++|+++||.+|++......... ..++++++++.||
T Consensus       183 ~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l-~~ad~vi~~~~el  230 (260)
T PLN03243        183 ERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYEL-SAGDLVVRRLDDL  230 (260)
T ss_pred             HHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhh-ccCCEEeCCHHHH
Confidence            99999999999999999999999999733333222 2348889888764

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.93  E-value=1.7e-25  Score=216.41  Aligned_cols=123  Identities=23%  Similarity=0.292  Sum_probs=109.2

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|+++|++++|+||+....++.+++.+   ++.++|+.++  +.....||+|++|+.+++++|++ |
T Consensus        90 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~  165 (222)
T PRK10826         90 TRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMF---DLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVD-P  165 (222)
T ss_pred             CCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhC---cchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCC-H
Confidence            4579999999999999999999999999999999999999   9999999998  45677899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCC-CCCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLP-ENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~-~~~~~~~i~~l~eL  526 (526)
                      ++|+||||+.+|+.+|+++|+++|++.++...... ...++.+++|+.||
T Consensus       166 ~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl  215 (222)
T PRK10826        166 LTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTEL  215 (222)
T ss_pred             HHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHH
Confidence            99999999999999999999999999987544322 22348888888764

>PRK11587 putative phosphatase; Provisional

Probab=99.93  E-value=1.9e-25  Score=215.45  Aligned_cols=121  Identities=21%  Similarity=0.213  Sum_probs=103.8

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      .+.++||+.++|+.|+++|++++|+||++.......++..   ++ .+|+.++  +.....||+|++|..+++++|++ |
T Consensus        81 ~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~---~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~-p  155 (218)
T PRK11587         81 GITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAA---GL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLA-P  155 (218)
T ss_pred             CceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhc---CC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCC-c
Confidence            4579999999999999999999999999988878888888   77 4577776  45667899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      ++|+||||+..|+++|+++||.+|++.++..... ...++.+++++.||
T Consensus       156 ~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~-~~~~~~~~~~~~el  203 (218)
T PRK11587        156 QECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPR-LDEVDLVLHSLEQL  203 (218)
T ss_pred             ccEEEEecchhhhHHHHHCCCEEEEECCCCchhh-hccCCEEecchhhe
Confidence            9999999999999999999999999987643222 22348899998875

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.93  E-value=1.7e-25  Score=220.76  Aligned_cols=104  Identities=17%  Similarity=0.126  Sum_probs=96.9

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc-ceEE--eCCcCCCCCHHHHHHHHHHcCC-C
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFF--DTAVGNKRETPSYVEITNSLGV-D  475 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f-d~i~--~~~~~~KP~p~~~~~~~~~l~~-~  475 (526)
                      ...++||+.++|+.|+++|++++|+||++...++.+++++   |+.++| |.++  ++....||+|++|.++++++|+ +
T Consensus        97 ~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~---gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~  173 (253)
T TIGR01422        97 YSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEA---ALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYD  173 (253)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHH---HhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999999999999999999   999986 8877  4567789999999999999999 4


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCcEEEEeCCC
Q 009774          476 KPSEILFVTDVYQEATAAKAAGLEVVISIRPG  507 (526)
Q Consensus       476 ~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~  507 (526)
                       |++|+||||+++|+.+|+++||.+|+|.++.
T Consensus       174 -~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~  204 (253)
T TIGR01422       174 -VAACVKVGDTVPDIEEGRNAGMWTVGLILSS  204 (253)
T ss_pred             -chheEEECCcHHHHHHHHHCCCeEEEEecCC
Confidence             9999999999999999999999999999884

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.93  E-value=7.6e-25  Score=207.93  Aligned_cols=106  Identities=25%  Similarity=0.346  Sum_probs=99.3

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|++|+++|++++|+||++...++.+++++   |+.++||.++  ++.+..||+|++|+++++++|++ |
T Consensus        90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~---gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~-p  165 (198)
T TIGR01428        90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHA---GLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVP-P  165 (198)
T ss_pred             cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHC---CChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCC-h
Confidence            3479999999999999999999999999999999999999   9999999998  45777899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPGNG  509 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~  509 (526)
                      ++|+||||+..|+.+|+++||++||+++++.+
T Consensus       166 ~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~~~  197 (198)
T TIGR01428       166 DEVLFVASNPWDLGGAKKFGFKTAWVNRPGEP  197 (198)
T ss_pred             hhEEEEeCCHHHHHHHHHCCCcEEEecCCCCC
Confidence            99999999999999999999999999997654

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.93  E-value=4e-25  Score=212.08  Aligned_cols=123  Identities=22%  Similarity=0.257  Sum_probs=108.8

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|+++|++++|+||++...++.+++++   ++.++|+.++  ++....||+|++|.+++++++++ |
T Consensus        83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~-~  158 (213)
T TIGR01449        83 LTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELL---GLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVA-P  158 (213)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCC-h
Confidence            4579999999999999999999999999999999999999   9999999988  44667899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCC-CCCCCC-CCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPG-NGPLPE-NHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~-~~~~~~-~~~~~~i~~l~eL  526 (526)
                      ++|+||||+.+|+.+|+++|+.+|++.++. ...... ..++++++++.||
T Consensus       159 ~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l  209 (213)
T TIGR01449       159 QQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNEL  209 (213)
T ss_pred             hHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHH
Confidence            999999999999999999999999999873 332332 3358899988764

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.93  E-value=4.1e-25  Score=225.61  Aligned_cols=122  Identities=12%  Similarity=0.093  Sum_probs=108.4

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|+++|++++|+||++...++.+++++   |+.+||+.++  ++....||+|++|+++++++|++ |
T Consensus       214 ~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~l---gL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~-P  289 (381)
T PLN02575        214 IYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSI---GIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFI-P  289 (381)
T ss_pred             CCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCC-c
Confidence            3579999999999999999999999999999999999999   9999999998  45667899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      ++|+||||+..|+++|+++||.+|++.++...... ..++++|+++.||
T Consensus       290 eecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l-~~Ad~iI~s~~EL  337 (381)
T PLN02575        290 ERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYEL-GAADLVVRRLDEL  337 (381)
T ss_pred             ccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHh-cCCCEEECCHHHH
Confidence            99999999999999999999999999875322222 2347889998774

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.93  E-value=8.3e-25  Score=217.52  Aligned_cols=106  Identities=17%  Similarity=0.109  Sum_probs=96.0

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc-ceEE--eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFF--DTAVGNKRETPSYVEITNSLGVDK  476 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f-d~i~--~~~~~~KP~p~~~~~~~~~l~~~~  476 (526)
                      .+.++||+.++|+.|+++|++++|+||++...+..+++.+   ++.++| +.++  ++....||+|++|+.+++++|+.+
T Consensus        99 ~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~---~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~  175 (267)
T PRK13478         99 YATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLA---AAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYD  175 (267)
T ss_pred             cCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHH---hhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCC
Confidence            4579999999999999999999999999999999999998   788875 7777  456778999999999999999952


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCcEEEEeCCCC
Q 009774          477 PSEILFVTDVYQEATAAKAAGLEVVISIRPGN  508 (526)
Q Consensus       477 p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~  508 (526)
                      |++|+||||+++|+++|+++|+.+|+|.++..
T Consensus       176 ~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~  207 (267)
T PRK13478        176 VAACVKVDDTVPGIEEGLNAGMWTVGVILSGN  207 (267)
T ss_pred             CcceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence            69999999999999999999999999998843

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.93  E-value=9.2e-25  Score=210.81  Aligned_cols=124  Identities=13%  Similarity=0.125  Sum_probs=107.1

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcc--cccceEE--eCCcCCCCCHHHHHHHHHHcCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR--KYLSGFF--DTAVGNKRETPSYVEITNSLGVD  475 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~--~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~  475 (526)
                      ..+++||+.++|+.|+++|++++|+||++...++.+++++   ++.  .+|+.++  ++....||+|++|+++++++++.
T Consensus        85 ~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~---~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~  161 (220)
T TIGR03351        85 PPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKL---GWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQ  161 (220)
T ss_pred             CCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHh---hhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCC
Confidence            3579999999999999999999999999999999999999   998  9999998  44667899999999999999994


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCcE-EEEeCCC-CCCCCC-CCCCeEecCCCCC
Q 009774          476 KPSEILFVTDVYQEATAAKAAGLEV-VISIRPG-NGPLPE-NHGFKTINSFAEI  526 (526)
Q Consensus       476 ~p~~~l~VgDs~~Di~~A~~aG~~~-i~v~~~~-~~~~~~-~~~~~~i~~l~eL  526 (526)
                      +|++|+||||++.|+++|+++||.+ |++.++. +..... ..++.+++++.||
T Consensus       162 ~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l  215 (220)
T TIGR03351       162 DVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADL  215 (220)
T ss_pred             ChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHH
Confidence            2699999999999999999999999 8998873 333332 2347888887654

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK09449 dUMP phosphatase; Provisional

Probab=99.92  E-value=4.6e-24  Score=206.49  Aligned_cols=122  Identities=16%  Similarity=0.169  Sum_probs=105.1

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      ..++||+.++|+.|+ +|++++|+||++...++..++++   |+.++||.++  ++.+..||+|++|.++++++|+.+++
T Consensus        94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~---~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~  169 (224)
T PRK09449         94 CTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERT---GLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRS  169 (224)
T ss_pred             CccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhC---ChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcc
Confidence            579999999999999 57999999999999999999999   9999999998  45677899999999999999985258


Q ss_pred             cEEEEecCH-hhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          479 EILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       479 ~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      +|+||||+. +|+.+|+++||.+|++.+++........++++|+++.||
T Consensus       170 ~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el  218 (224)
T PRK09449        170 RVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSEL  218 (224)
T ss_pred             cEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHH
Confidence            999999998 699999999999999987543322222458899988764

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.92  E-value=1.1e-24  Score=208.12  Aligned_cols=123  Identities=22%  Similarity=0.212  Sum_probs=109.3

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      .++++||+.++|++|+++|++++|+||++...++..++++   |+.++|+.++  ++....||+|++|++++++++++ |
T Consensus        73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~-~  148 (205)
T TIGR01454        73 EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEAL---GLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVP-P  148 (205)
T ss_pred             ccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHc---CChhheeeEEecCcCCCCCCChHHHHHHHHHcCCC-h
Confidence            4689999999999999999999999999999999999999   9999999988  44667899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCC-CCCCCCC-CCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRP-GNGPLPE-NHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~-~~~~~~~-~~~~~~i~~l~eL  526 (526)
                      ++|+||||+..|+.+|+++||++|++.|+ ++..... ..++++++++.||
T Consensus       149 ~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l  199 (205)
T TIGR01454       149 EDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSL  199 (205)
T ss_pred             hheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHH
Confidence            99999999999999999999999999998 4443332 3348889888664

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.92  E-value=2.7e-24  Score=214.00  Aligned_cols=123  Identities=22%  Similarity=0.273  Sum_probs=108.3

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|+++|++++|+||++...++..++.+   ++..+|+.++  ++....||+|++|+.+++++|++ |
T Consensus        99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~---~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~-~  174 (272)
T PRK13223         99 LTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQM---KIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVP-P  174 (272)
T ss_pred             CCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHc---CcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCC-h
Confidence            4579999999999999999999999999999999999999   9999999888  44667899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCCC-CCCC-CCCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLP-ENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~-~~~~-~~~~~~~i~~l~eL  526 (526)
                      ++|+||||+.+|+++|+++||+++++.++.. .... ...++++++++.||
T Consensus       175 ~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el  225 (272)
T PRK13223        175 SQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRAL  225 (272)
T ss_pred             hHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHH
Confidence            9999999999999999999999999999733 2222 23458899988764

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.92  E-value=2.3e-24  Score=208.50  Aligned_cols=103  Identities=16%  Similarity=0.190  Sum_probs=95.5

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|+++|++++|+||++...++..++++   |+.++|+.++  ++....||+|++|+++++++|++ |
T Consensus        91 ~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~---~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~-p  166 (224)
T PRK14988         91 RAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHT---GLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLK-A  166 (224)
T ss_pred             cCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHC---CcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCC-h
Confidence            4579999999999999999999999999999999999999   9999999998  45677899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcE-EEEeCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEV-VISIRP  506 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~-i~v~~~  506 (526)
                      ++|+||||++.|+++|+++||.+ +++..+
T Consensus       167 ~~~l~igDs~~di~aA~~aG~~~~~~v~~~  196 (224)
T PRK14988        167 ERTLFIDDSEPILDAAAQFGIRYCLGVTNP  196 (224)
T ss_pred             HHEEEEcCCHHHHHHHHHcCCeEEEEEeCC
Confidence            99999999999999999999985 667665

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.92  E-value=2.2e-24  Score=208.00  Aligned_cols=105  Identities=29%  Similarity=0.296  Sum_probs=98.7

Q ss_pred             cccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCC
Q 009774          398 ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVD  475 (526)
Q Consensus       398 ~~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~  475 (526)
                      ....+++||+.++|+.|+++|++++++||+++......++.+   |+.++|+.++  +++...||+|++|++++++||++
T Consensus        82 ~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~---gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~  158 (221)
T COG0637          82 LEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARL---GLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVD  158 (221)
T ss_pred             hcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHc---cChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCC
Confidence            345689999999999999999999999999999999999999   9999999988  56777799999999999999998


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          476 KPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       476 ~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                       |++||.|+||+.++.+|++|||.+|++..+
T Consensus       159 -P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~  188 (221)
T COG0637         159 -PEECVVVEDSPAGIQAAKAAGMRVVGVPAG  188 (221)
T ss_pred             -hHHeEEEecchhHHHHHHHCCCEEEEecCC
Confidence             999999999999999999999999999985

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.92  E-value=2.2e-23  Score=201.42  Aligned_cols=122  Identities=17%  Similarity=0.214  Sum_probs=107.7

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHc-CCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSL-GVDK  476 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l-~~~~  476 (526)
                      .++++||+.++|+.|+++ ++++|+||++...++.+++.+   ++..+||.++  ++.+..||+|++|+++++++ +++ 
T Consensus        95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~---~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~-  169 (224)
T TIGR02254        95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKS---GLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFS-  169 (224)
T ss_pred             cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHC---CcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCC-
Confidence            357999999999999999 999999999999999999999   9999999998  44677899999999999999 997 


Q ss_pred             CCcEEEEecCH-hhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          477 PSEILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       477 p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      |++|+||||+. .|+.+|+++||.+|++++++........++++++++.||
T Consensus       170 ~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el  220 (224)
T TIGR02254       170 KEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEEL  220 (224)
T ss_pred             chheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHH
Confidence            99999999998 799999999999999998744322233447889998764

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PLN02940 riboflavin kinase

Probab=99.91  E-value=5e-24  Score=221.44  Aligned_cols=123  Identities=20%  Similarity=0.241  Sum_probs=108.0

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHh-hcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFG-NSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK  476 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~-~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~  476 (526)
                      .+.++||+.++|+.|+++|++++|+||++...++..++ .+   ++.++||.++  +++...||+|++|+.++++++++ 
T Consensus        91 ~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~---gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~-  166 (382)
T PLN02940         91 NIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQ---GWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVE-  166 (382)
T ss_pred             cCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcc---ChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCC-
Confidence            45799999999999999999999999999999888887 77   9999999998  45778899999999999999997 


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          477 PSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       477 p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      |++|+||||+..|+.+|+++||.+|++.++.........++..++++.||
T Consensus       167 p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el  216 (382)
T PLN02940        167 PSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDL  216 (382)
T ss_pred             hhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHc
Confidence            99999999999999999999999999998743222223347889888775

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.91  E-value=9e-24  Score=206.45  Aligned_cols=117  Identities=15%  Similarity=0.099  Sum_probs=99.1

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|+++ ++++|+||++..     ++++   |+.++||.++  ++....||+|++|..+++++|++ |
T Consensus       111 ~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~---gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~-~  180 (238)
T PRK10748        111 RIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELF---GLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVP-I  180 (238)
T ss_pred             cCCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHC---CcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCC-h
Confidence            357999999999999975 999999998875     3667   9999999998  45677899999999999999997 9


Q ss_pred             CcEEEEecCH-hhHHHHHHcCCcEEEEeCCCCC---C-CCCCCCCeEecCCCCC
Q 009774          478 SEILFVTDVY-QEATAAKAAGLEVVISIRPGNG---P-LPENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~---~-~~~~~~~~~i~~l~eL  526 (526)
                      ++|+||||++ .|+.+|+++||++||+++++..   . .....++.+|+++.||
T Consensus       181 ~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el  234 (238)
T PRK10748        181 GEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASL  234 (238)
T ss_pred             hHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHH
Confidence            9999999995 9999999999999999986322   1 1113357899998774

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.91  E-value=1.2e-23  Score=203.58  Aligned_cols=123  Identities=24%  Similarity=0.300  Sum_probs=108.3

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ..+++||+.++|+.|+++|++++++||+....++.+++++   ++..+|+.++  +.....||+|++|++++++++++ |
T Consensus        91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~-~  166 (226)
T PRK13222         91 GSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEAL---GIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLD-P  166 (226)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCC-h
Confidence            4579999999999999999999999999999999999999   9999999988  34567899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCCC-CCCC-CCCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLP-ENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~-~~~~-~~~~~~~i~~l~eL  526 (526)
                      ++|+||||+.+|+++|+++|+.+|++.++.. .... ...++++++++.||
T Consensus       167 ~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l  217 (226)
T PRK13222        167 EEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAEL  217 (226)
T ss_pred             hheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHH
Confidence            9999999999999999999999999998843 2222 23458899998764

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.91  E-value=6.8e-24  Score=210.62  Aligned_cols=122  Identities=18%  Similarity=0.165  Sum_probs=104.4

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      .++++||+.++|+.|+++|++++|+||++...+..+++++   |+.++|+.++.... .+++|+.|++++++++++ |++
T Consensus       140 ~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~---gl~~~F~~vi~~~~-~~~k~~~~~~~l~~~~~~-p~~  214 (273)
T PRK13225        140 ALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQ---GLRSLFSVVQAGTP-ILSKRRALSQLVAREGWQ-PAA  214 (273)
T ss_pred             cCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CChhheEEEEecCC-CCCCHHHHHHHHHHhCcC-hhH
Confidence            4579999999999999999999999999999999999999   99999998873211 134578999999999997 999


Q ss_pred             EEEEecCHhhHHHHHHcCCcEEEEeCCCCC-CCC-CCCCCeEecCCCCC
Q 009774          480 ILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLP-ENHGFKTINSFAEI  526 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~-~~~-~~~~~~~i~~l~eL  526 (526)
                      |+||||+..|+.+|+++||.+|++.++.+. ... ...++++|+++.||
T Consensus       215 ~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL  263 (273)
T PRK13225        215 VMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDL  263 (273)
T ss_pred             EEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHH
Confidence            999999999999999999999999998433 222 23458999988764

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.91  E-value=7.7e-24  Score=204.57  Aligned_cols=119  Identities=18%  Similarity=0.207  Sum_probs=98.6

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccc-eEE--eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS-GFF--DTAVGNKRETPSYVEITNSLGVDK  476 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd-~i~--~~~~~~KP~p~~~~~~~~~l~~~~  476 (526)
                      ..+++||+.++|+.|+   ++++|+||++...++..++++   ++.++|+ .++  ++....||+|++|+.++++++++ 
T Consensus        86 ~~~~~~gv~~~L~~L~---~~~~ivTn~~~~~~~~~l~~~---~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~-  158 (221)
T PRK10563         86 ELEPIAGANALLESIT---VPMCVVSNGPVSKMQHSLGKT---GMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVN-  158 (221)
T ss_pred             cCCcCCCHHHHHHHcC---CCEEEEeCCcHHHHHHHHHhc---ChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCC-
Confidence            4679999999999994   899999999999999999999   9999996 455  35678899999999999999997 


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCC
Q 009774          477 PSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE  525 (526)
Q Consensus       477 p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e  525 (526)
                      |++|+||||++.|+++|+++|+.+|++..++........++.+++++.|
T Consensus       159 p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~  207 (221)
T PRK10563        159 VENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQ  207 (221)
T ss_pred             HHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHH
Confidence            9999999999999999999999999997552222222222445666554

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.90  E-value=9.8e-23  Score=204.15  Aligned_cols=124  Identities=21%  Similarity=0.194  Sum_probs=102.6

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE-eCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      ++++||+.++|+.|+++|++++|+||++...+..+++.+...++..+|+.+. ++....||+|++|.++++++|++ |++
T Consensus       143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~-p~~  221 (286)
T PLN02779        143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVD-PSR  221 (286)
T ss_pred             CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcC-hHH
Confidence            4799999999999999999999999999999998888762112334444443 45667899999999999999997 999


Q ss_pred             EEEEecCHhhHHHHHHcCCcEEEEeCCC-CCCCCCCCCCeEecCCCCC
Q 009774          480 ILFVTDVYQEATAAKAAGLEVVISIRPG-NGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~aG~~~i~v~~~~-~~~~~~~~~~~~i~~l~eL  526 (526)
                      |+||||+..|+++|+++||.+|++.++. +.... ..++.+++++.|+
T Consensus       222 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l-~~ad~vi~~~~~l  268 (286)
T PLN02779        222 CVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDF-SGADAVFDCLGDV  268 (286)
T ss_pred             EEEEeCCHHhHHHHHHcCCEEEEEccCCcccccc-CCCcEEECChhhc
Confidence            9999999999999999999999998873 33333 3348899998875

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.90  E-value=1.2e-22  Score=196.80  Aligned_cols=122  Identities=25%  Similarity=0.276  Sum_probs=106.5

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ..+++|++.++|+.|+++ ++++++||+....+...++.+   ||.++||.++  +..+..||+|++|..+++++|++ |
T Consensus        97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~---gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~-p  171 (229)
T COG1011          97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQL---GLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVP-P  171 (229)
T ss_pred             hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHc---CChhhhheEEEecccccCCCCcHHHHHHHHHcCCC-c
Confidence            357999999999999999 999999999999999999999   9999999999  45778899999999999999997 9


Q ss_pred             CcEEEEecCH-hhHHHHHHcCCcEEEEeCCCCCC-CCCCCCCeEecCCCCC
Q 009774          478 SEILFVTDVY-QEATAAKAAGLEVVISIRPGNGP-LPENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~~-~~~~~~~~~i~~l~eL  526 (526)
                      ++|+||||+. +||.+|+++||++||+++++... .....++..++++.||
T Consensus       172 ~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l  222 (229)
T COG1011         172 EEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAEL  222 (229)
T ss_pred             ceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHH
Confidence            9999999999 78899999999999999985432 1113347788877653

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.90  E-value=2.5e-22  Score=191.35  Aligned_cols=98  Identities=19%  Similarity=0.256  Sum_probs=89.8

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|+++|++++|+||++... +..++++   |+..+|+.++  +.....||+|++|+++++++|++ |
T Consensus       103 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~~---~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~-~  177 (203)
T TIGR02252       103 PWQVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEAL---GLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGIS-P  177 (203)
T ss_pred             cceeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHHC---CcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCC-h
Confidence            34799999999999999999999999998764 6788999   9999999998  45677899999999999999997 9


Q ss_pred             CcEEEEecCH-hhHHHHHHcCCcEEE
Q 009774          478 SEILFVTDVY-QEATAAKAAGLEVVI  502 (526)
Q Consensus       478 ~~~l~VgDs~-~Di~~A~~aG~~~i~  502 (526)
                      ++|+||||+. .|+.+|+++||++||
T Consensus       178 ~~~~~IgD~~~~Di~~A~~aG~~~i~  203 (203)
T TIGR02252       178 EEALHIGDSLRNDYQGARAAGWRALL  203 (203)
T ss_pred             hHEEEECCCchHHHHHHHHcCCeeeC
Confidence            9999999998 899999999999986

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]

Probab=99.89  E-value=2.9e-22  Score=184.54  Aligned_cols=242  Identities=48%  Similarity=0.759  Sum_probs=220.8

Q ss_pred             CCCceEEEEeccccccccccccccchhhHHhhHHhhhhhhcCChhhHHHHHHHHHHhHHhhhhccCCccCCCCCCCchHH
Q 009774          281 GLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE  360 (526)
Q Consensus       281 ~~~ikaVlFD~DGTL~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (526)
                      -.+.+.++.|+.||.+..+|+.+.+|||+...+.+++...|..+...+.+..++....++. ....+.+|++....+.+.
T Consensus         5 ~~~~k~~llDIegttt~isfVkd~LFpya~~nV~~~v~~~~~~~~~~~iv~~l~~~~~e~~-~~~~~~v~i~~~~~~~e~   83 (254)
T KOG2630|consen    5 VRKWKELLLDIEGTTTSISFVKDVLFPYAKENVEELVQEPYETKIGQEIVSELRQRPEEQL-GSTNNIVPITDVTAAEEA   83 (254)
T ss_pred             hhhhhhheEeEEeeecchHHHHHhhhHHHHHHHHHHhcCccccchHHHHHHHHhhhHHHHh-ccccCcccccccchhhhh
Confidence            3567899999999999999999999999999999999999999988899999999887777 677788888887766666


Q ss_pred             HHHHHHHHHHHHHhhhhcchhhHhhhHHHHHHhhhcccccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcC
Q 009774          361 VIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN  440 (526)
Q Consensus       361 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~  440 (526)
                      .++  ..+.+..++.+.+.+.++++++.+|+.+|.........|+++...++.++..|++++|.|+++...+..+..+..
T Consensus        84 ~v~--v~~v~~~~~~d~k~t~~K~lQg~iw~~gy~sg~lk~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~  161 (254)
T KOG2630|consen   84 DVH--VANVEKLISFDEKRTILKQLQGRIWAAGYESGELKAHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSD  161 (254)
T ss_pred             hhH--HHHHHHHHhhhcccchhHHHHHHHHHhhcccccccccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccC
Confidence            666  667788899999999999999999999999998888999999999999999999999999999999999999888


Q ss_pred             CCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCC--Ce
Q 009774          441 YGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG--FK  518 (526)
Q Consensus       441 ~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~--~~  518 (526)
                      .+.+.+|++.+||...+.|-....|.++.+.+|.+ |.+++|.-|-+....+|+.+|+.+..+.|+|+.+..+.+.  +.
T Consensus       162 ~gdl~~y~~gyfDt~iG~K~e~~sy~~I~~~Ig~s-~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~  240 (254)
T KOG2630|consen  162 AGDLRKYISGYFDTTIGLKVESQSYKKIGHLIGKS-PREILFLTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYC  240 (254)
T ss_pred             cchHHHHhhhhhhccccceehhHHHHHHHHHhCCC-hhheEEeccChHHHHHHHhcccceeeeecCCCCCCCccccccee
Confidence            88999999999999889999999999999999997 9999999999999999999999999999998887776666  78


Q ss_pred             EecCCCCC
Q 009774          519 TINSFAEI  526 (526)
Q Consensus       519 ~i~~l~eL  526 (526)
                      ++.+|..|
T Consensus       241 ~i~~F~~l  248 (254)
T KOG2630|consen  241 VIWSFEIL  248 (254)
T ss_pred             eeccchhh
Confidence            88888754

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.89  E-value=8.1e-23  Score=191.52  Aligned_cols=97  Identities=21%  Similarity=0.299  Sum_probs=89.2

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      ..++||+.++|+.|+++|++++|+||+..  ...+++++   ++..+|+.++  ++....||+|++|++++++++++ |+
T Consensus        86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~-~~  159 (185)
T TIGR01990        86 ADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKL---GLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVS-PS  159 (185)
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhc---CcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCC-HH
Confidence            47999999999999999999999999753  45689999   9999999988  45677899999999999999997 99


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEEEE
Q 009774          479 EILFVTDVYQEATAAKAAGLEVVIS  503 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i~v  503 (526)
                      +|+||||++.|+++|+++||++|+|
T Consensus       160 ~~v~vgD~~~di~aA~~aG~~~i~v  184 (185)
T TIGR01990       160 ECIGIEDAQAGIEAIKAAGMFAVGV  184 (185)
T ss_pred             HeEEEecCHHHHHHHHHcCCEEEec
Confidence            9999999999999999999999987

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.89  E-value=1.6e-22  Score=189.44  Aligned_cols=98  Identities=24%  Similarity=0.342  Sum_probs=90.5

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|+++|++++++||+  ..++.+++++   ++..+|+.++  +.....||+|++|.+++++++++ |
T Consensus        86 ~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~---~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~-~  159 (185)
T TIGR02009        86 GAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKL---GLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVS-P  159 (185)
T ss_pred             CCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHc---ChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCC-H
Confidence            4689999999999999999999999998  5578889999   9999999998  44667899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEE
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVIS  503 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v  503 (526)
                      ++|+||||+..|+++|+++|+++|+|
T Consensus       160 ~~~v~IgD~~~di~aA~~~G~~~i~v  185 (185)
T TIGR02009       160 NECVVFEDALAGVQAARAAGMFAVAV  185 (185)
T ss_pred             HHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence            99999999999999999999999875

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.89  E-value=2.6e-22  Score=214.48  Aligned_cols=121  Identities=21%  Similarity=0.214  Sum_probs=102.8

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEe-CCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD-TAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~-~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      ..++|||+.++|+.|+++|++++|+||++...++.+++++   ++.++|+.++. +....||+|++|..+++++  + |+
T Consensus       328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~---~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l--~-~~  401 (459)
T PRK06698        328 KGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYY---DLDQWVTETFSIEQINSLNKSDLVKSILNKY--D-IK  401 (459)
T ss_pred             CCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHC---CcHhhcceeEecCCCCCCCCcHHHHHHHHhc--C-cc
Confidence            4579999999999999999999999999999999999999   99999999982 2223478889999999886  4 67


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          479 EILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      +|++|||+++|+.+|+++||.+|++.++.........++++++++.||
T Consensus       402 ~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el  449 (459)
T PRK06698        402 EAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLEL  449 (459)
T ss_pred             eEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHH
Confidence            999999999999999999999999998743222223458899988764

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.88  E-value=9e-22  Score=181.47  Aligned_cols=100  Identities=29%  Similarity=0.439  Sum_probs=94.8

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ..+++||+.++|+.|+++|++++++||++...++..++++   |+.++|+.++  ++.+..||+|++|+.++++++++ |
T Consensus        75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~---~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~-p  150 (176)
T PF13419_consen   75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERL---GLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIP-P  150 (176)
T ss_dssp             GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHT---THGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSS-G
T ss_pred             ccchhhhhhhhhhhcccccceeEEeecCCccccccccccc---ccccccccccccchhhhhhhHHHHHHHHHHHcCCC-c
Confidence            4579999999999999999999999999999999999999   9999999998  45677899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEE
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVIS  503 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v  503 (526)
                      ++|+||||++.|+++|+++||.+|+|
T Consensus       151 ~~~~~vgD~~~d~~~A~~~G~~~i~v  176 (176)
T PF13419_consen  151 EEILFVGDSPSDVEAAKEAGIKTIWV  176 (176)
T ss_dssp             GGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred             ceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence            99999999999999999999999986

...

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.88  E-value=7.5e-22  Score=185.62  Aligned_cols=99  Identities=19%  Similarity=0.330  Sum_probs=91.0

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++|+ .++|+.|++. ++++|+||++...++.+++++   ++.++|+.++  ++....||+|++|++++++++++ |
T Consensus        86 ~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~---~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~-~  159 (188)
T PRK10725         86 SVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHL---GLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQ-P  159 (188)
T ss_pred             cCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhC---CcHhHceEEEehhhccCCCCChHHHHHHHHHcCCC-H
Confidence            3468885 6999999875 899999999999999999999   9999999988  55678899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEe
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISI  504 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~  504 (526)
                      ++|+||||+..|+++|+++|+++|++.
T Consensus       160 ~~~l~igDs~~di~aA~~aG~~~i~~~  186 (188)
T PRK10725        160 TQCVVFEDADFGIQAARAAGMDAVDVR  186 (188)
T ss_pred             HHeEEEeccHhhHHHHHHCCCEEEeec
Confidence            999999999999999999999999874

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.88  E-value=4.8e-22  Score=186.47  Aligned_cols=97  Identities=25%  Similarity=0.389  Sum_probs=88.7

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcC----CCCCHHHHHHHHHHcC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVG----NKRETPSYVEITNSLG  473 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~----~KP~p~~~~~~~~~l~  473 (526)
                      ..+++||+.++|+.|+   ++++|+||++...+..+++.+   |+.++||.++  ++...    .||+|++|+++++++|
T Consensus        82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~---gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~  155 (184)
T TIGR01993        82 KLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRL---GIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAG  155 (184)
T ss_pred             hCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHc---CcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhC
Confidence            3579999999999998   479999999999999999999   9999999988  33444    5999999999999999


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCCcEEEE
Q 009774          474 VDKPSEILFVTDVYQEATAAKAAGLEVVIS  503 (526)
Q Consensus       474 ~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v  503 (526)
                      ++ |++|+||||++.|+.+|+++||++|+|
T Consensus       156 ~~-~~~~l~vgD~~~di~aA~~~G~~~i~v  184 (184)
T TIGR01993       156 VD-PERAIFFDDSARNIAAAKALGMKTVLV  184 (184)
T ss_pred             CC-ccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence            97 999999999999999999999999975

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.87  E-value=7.5e-22  Score=189.28  Aligned_cols=103  Identities=16%  Similarity=0.166  Sum_probs=89.8

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHH--HHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLA--QRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVD  475 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~--~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~  475 (526)
                      ...++||+.++|+.|+++|++++|+||++...  ....+..+   ++.++||.++  ++.+..||+|++|+.+++++|++
T Consensus        92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~---~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~  168 (211)
T TIGR02247        92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPG---DIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVA  168 (211)
T ss_pred             ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhh---hhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCC
Confidence            45799999999999999999999999987543  22334445   7889999998  34667899999999999999997


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          476 KPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       476 ~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                       |++|+||||+..|+.+|+++||.+|++.++
T Consensus       169 -~~~~l~i~D~~~di~aA~~aG~~~i~v~~~  198 (211)
T TIGR02247       169 -PEECVFLDDLGSNLKPAAALGITTIKVSDE  198 (211)
T ss_pred             -HHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence             999999999999999999999999999875

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.87  E-value=3.9e-21  Score=221.99  Aligned_cols=121  Identities=19%  Similarity=0.217  Sum_probs=108.0

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcc-cccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~-~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      .++||+.++|+.|+++|++++|+||+....++..++++   ++. .+||.++  ++....||+|++|++++++++++ |+
T Consensus       161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~---gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~-p~  236 (1057)
T PLN02919        161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAA---GLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVP-TS  236 (1057)
T ss_pred             ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHc---CCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcC-cc
Confidence            48999999999999999999999999999999999999   885 7899998  45777899999999999999997 99


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCC-CCCCeEecCCCCC
Q 009774          479 EILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPE-NHGFKTINSFAEI  526 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~-~~~~~~i~~l~eL  526 (526)
                      +|+||||+..|+++|+++||++|++.++.....+. ..++.+++++.|+
T Consensus       237 e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el  285 (1057)
T PLN02919        237 ECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNI  285 (1057)
T ss_pred             cEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHC
Confidence            99999999999999999999999999975433332 3448899998875

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.86  E-value=5e-21  Score=178.75  Aligned_cols=98  Identities=26%  Similarity=0.338  Sum_probs=90.6

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      .+++||+.++|+.|+++|++++|+||++... ..++.++   |+.++|+.++  +.....||+|++|+.++++++++ |+
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~---~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~-~~  158 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQEL---GLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLK-PE  158 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhc---CCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCC-cc
Confidence            5799999999999999999999999999988 6666668   9999999988  35678999999999999999997 99


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEEEE
Q 009774          479 EILFVTDVYQEATAAKAAGLEVVIS  503 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i~v  503 (526)
                      +|+||||++.|+.+|+++|+.+|++
T Consensus       159 ~~~~vgD~~~di~aA~~~G~~~i~v  183 (183)
T TIGR01509       159 ECLFVDDSPAGIEAAKAAGMHTVLV  183 (183)
T ss_pred             eEEEEcCCHHHHHHHHHcCCEEEeC
Confidence            9999999999999999999999975

HAD subfamilies caused by an overly broad single model.

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.86  E-value=7.8e-21  Score=180.64  Aligned_cols=102  Identities=18%  Similarity=0.258  Sum_probs=91.7

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      .++||+.++|+.|+++|++++|+||++.......+....  ++..+||.++  ++.+..||+|++|+++++++|++ |++
T Consensus        84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~--~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~-p~~  160 (199)
T PRK09456         84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYP--EVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFS-AAD  160 (199)
T ss_pred             ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhch--hHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCC-hhH
Confidence            589999999999999999999999999887665554421  7888999998  45778899999999999999997 999


Q ss_pred             EEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          480 ILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      |+||||++.|+.+|+++||++|++.++
T Consensus       161 ~l~vgD~~~di~aA~~aG~~~i~~~~~  187 (199)
T PRK09456        161 AVFFDDNADNIEAANALGITSILVTDK  187 (199)
T ss_pred             eEEeCCCHHHHHHHHHcCCEEEEecCC
Confidence            999999999999999999999999875

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.86  E-value=1.5e-20  Score=178.33  Aligned_cols=90  Identities=13%  Similarity=0.166  Sum_probs=82.9

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      .+.+++.++|+.|+++|++++|+||++...++.+++++   |+..+|+.++  ++... ||+|++|.++++++|++ |++
T Consensus       106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~---gl~~~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~-~~~  180 (197)
T TIGR01548       106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTH---GLEILFPVQIWMEDCPP-KPNPEPLILAAKALGVE-ACH  180 (197)
T ss_pred             ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHc---CchhhCCEEEeecCCCC-CcCHHHHHHHHHHhCcC-ccc
Confidence            46677799999999999999999999999999999999   9999999988  34455 99999999999999997 999


Q ss_pred             EEEEecCHhhHHHHHHc
Q 009774          480 ILFVTDVYQEATAAKAA  496 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~a  496 (526)
                      |+||||+++|+.+|+++
T Consensus       181 ~i~vGD~~~Di~aA~~a  197 (197)
T TIGR01548       181 AAMVGDTVDDIITGRKA  197 (197)
T ss_pred             EEEEeCCHHHHHHHHhC
Confidence            99999999999999975

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.85  E-value=1.1e-20  Score=175.93  Aligned_cols=119  Identities=21%  Similarity=0.254  Sum_probs=96.3

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchH---------------HHHHHHHhhcCCCCcccccceEEe-------------
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRKYLSGFFD-------------  453 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~---------------~~~~~~l~~l~~~gl~~~fd~i~~-------------  453 (526)
                      +++||+.++|++|+++|++++|+||++.               ......++.+   ++.  |+.++.             
T Consensus        26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~--~~~i~~~~~~~~~~~~~~~  100 (176)
T TIGR00213        26 EFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAER---DVD--LDGIYYCPHHPEGVEEFRQ  100 (176)
T ss_pred             EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHc---CCC--ccEEEECCCCCcccccccC
Confidence            5899999999999999999999999985               2334455555   554  666651             


Q ss_pred             CCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcE-EEEeCCCCC-CCCCCCCCeEecCCCCC
Q 009774          454 TAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV-VISIRPGNG-PLPENHGFKTINSFAEI  526 (526)
Q Consensus       454 ~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~-i~v~~~~~~-~~~~~~~~~~i~~l~eL  526 (526)
                      +....||+|++|++++++++++ |++|+||||+..|+++|+++|+.+ +++.++... ......++.+|+++.||
T Consensus       101 ~~~~~KP~p~~~~~a~~~~~~~-~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el  174 (176)
T TIGR00213       101 VCDCRKPKPGMLLQARKELHID-MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL  174 (176)
T ss_pred             CCCCCCCCHHHHHHHHHHcCcC-hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence            2335799999999999999997 999999999999999999999998 799987432 22223359999999876

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>PLN02811 hydrolase

Probab=99.83  E-value=4.5e-20  Score=178.20  Aligned_cols=123  Identities=17%  Similarity=0.241  Sum_probs=101.8

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHH-HHhhcCCCCcccccceEE--e--CCcCCCCCHHHHHHHHHHcC-
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRL-IFGNSNYGDLRKYLSGFF--D--TAVGNKRETPSYVEITNSLG-  473 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~-~l~~l~~~gl~~~fd~i~--~--~~~~~KP~p~~~~~~~~~l~-  473 (526)
                      ...++||+.++|+.|+++|++++|+||++...... ..+..   ++.++|+.++  +  ++...||+|++|++++++++ 
T Consensus        76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~---~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~  152 (220)
T PLN02811         76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHG---ELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFED  152 (220)
T ss_pred             hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccH---HHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCC
Confidence            45799999999999999999999999998765443 33344   7889999988  4  45678999999999999997 


Q ss_pred             --CCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          474 --VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       474 --~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                        ++ |++|+||||+..|+++|+++||++|++.++.........++.+++++.|+
T Consensus       153 ~~~~-~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~  206 (220)
T PLN02811        153 GPVD-PGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDF  206 (220)
T ss_pred             CCCC-ccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhC
Confidence              97 99999999999999999999999999988743222222347888888764

>PHA02597 30

Probab=99.83  E-value=6.5e-20  Score=173.95  Aligned_cols=116  Identities=16%  Similarity=0.187  Sum_probs=91.9

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc----ceEEeCCcCCCCCHHHHHHHHHHcCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL----SGFFDTAVGNKRETPSYVEITNSLGVDK  476 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f----d~i~~~~~~~KP~p~~~~~~~~~l~~~~  476 (526)
                      ..++||+.++|++|+++ ++++++||++.......++.+   ++..+|    +.++.. ...||+|++|+++++++|   
T Consensus        73 ~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~---~l~~~f~~~f~~i~~~-~~~~~kp~~~~~a~~~~~---  144 (197)
T PHA02597         73 LSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQF---NLNALFPGAFSEVLMC-GHDESKEKLFIKAKEKYG---  144 (197)
T ss_pred             ccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhC---CHHHhCCCcccEEEEe-ccCcccHHHHHHHHHHhC---
Confidence            46999999999999987 578999998887777777787   776655    444421 124788999999999998   


Q ss_pred             CCcEEEEecCHhhHHHHHHc--CCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          477 PSEILFVTDVYQEATAAKAA--GLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       477 p~~~l~VgDs~~Di~~A~~a--G~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      |++|+||||+..|+.+|+++  ||++|+++|+.. +. ....++.++|+.||
T Consensus       145 ~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~-~~-~~~~~~~~~~~~~~  194 (197)
T PHA02597        145 DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGER-DH-IPKLAHRVKSWNDI  194 (197)
T ss_pred             CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhh-cc-ccchhhhhccHHHH
Confidence            57899999999999999999  999999998843 11 11236888888764

2 hypothetical protein; Provisional

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.82  E-value=7.1e-20  Score=171.40  Aligned_cols=119  Identities=19%  Similarity=0.207  Sum_probs=95.5

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchH---------------HHHHHHHhhcCCCCcccccceEEe-------CCcCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRKYLSGFFD-------TAVGNK  459 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~---------------~~~~~~l~~l~~~gl~~~fd~i~~-------~~~~~K  459 (526)
                      .++||+.++|++|+++|++++|+||++.               ......++++   |+  +|+.++.       .....|
T Consensus        29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~---g~--~f~~i~~~~~~~~~~~~~~K  103 (181)
T PRK08942         29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADR---GG--RLDGIYYCPHHPEDGCDCRK  103 (181)
T ss_pred             EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHc---CC--ccceEEECCCCCCCCCcCCC
Confidence            4899999999999999999999999973               3344556666   65  4777662       235689


Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCC-CCCCCCC--CeEecCCCCC
Q 009774          460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLPENHG--FKTINSFAEI  526 (526)
Q Consensus       460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~-~~~~~~~--~~~i~~l~eL  526 (526)
                      |+|++|.++++++|++ |++|+||||+..|+.+|+++|+.+|++.++... ......+  +.+++++.||
T Consensus       104 P~p~~~~~~~~~l~~~-~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el  172 (181)
T PRK08942        104 PKPGMLLSIAERLNID-LAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADL  172 (181)
T ss_pred             CCHHHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHH
Confidence            9999999999999997 999999999999999999999999999887322 2222233  7888887653

>PRK06769 hypothetical protein; Validated

Probab=99.81  E-value=9e-20  Score=169.24  Aligned_cols=121  Identities=11%  Similarity=0.094  Sum_probs=95.4

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHH--------HHHHHHhhcCCCCcccccceEE---eCCcCCCCCHHHHHHHHH
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRL--------AQRLIFGNSNYGDLRKYLSGFF---DTAVGNKRETPSYVEITN  470 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~--------~~~~~l~~l~~~gl~~~fd~i~---~~~~~~KP~p~~~~~~~~  470 (526)
                      .+|||+.++|++|+++|++++|+||++..        .....++.+   |+.++|....   +.....||+|++|+++++
T Consensus        28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~---g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~  104 (173)
T PRK06769         28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGF---GFDDIYLCPHKHGDGCECRKPSTGMLLQAAE  104 (173)
T ss_pred             EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhC---CcCEEEECcCCCCCCCCCCCCCHHHHHHHHH
Confidence            48999999999999999999999998752        123346666   7666554433   234678999999999999


Q ss_pred             HcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCC-CC------CCC-CCCCCeEecCCCCC
Q 009774          471 SLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG-NG------PLP-ENHGFKTINSFAEI  526 (526)
Q Consensus       471 ~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~-~~------~~~-~~~~~~~i~~l~eL  526 (526)
                      +++++ |++|+||||+..|+.+|+++|+.+|++.++. ..      ... ...++++++++.||
T Consensus       105 ~l~~~-p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el  167 (173)
T PRK06769        105 KHGLD-LTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDA  167 (173)
T ss_pred             HcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHH
Confidence            99997 9999999999999999999999999999873 31      112 22347888887664

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.80  E-value=1.4e-19  Score=168.25  Aligned_cols=86  Identities=23%  Similarity=0.290  Sum_probs=79.1

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+       +++|+||++...++.+++++   ++.++|+.++  +++...||+|++|+++++++|++ |
T Consensus        88 ~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~---~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~-p  156 (175)
T TIGR01493        88 NLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQA---GLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLP-P  156 (175)
T ss_pred             cCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHC---CCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCC-H
Confidence            4579999999999       38999999999999999999   9999999987  45678899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHc
Q 009774          478 SEILFVTDVYQEATAAKAA  496 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~a  496 (526)
                      ++|+||||+..|+.+|+++
T Consensus       157 ~~~l~vgD~~~Di~~A~~~  175 (175)
T TIGR01493       157 DRVLMVAAHQWDLIGARKF  175 (175)
T ss_pred             HHeEeEecChhhHHHHhcC
Confidence            9999999999999999874

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.80  E-value=1.6e-19  Score=163.21  Aligned_cols=101  Identities=22%  Similarity=0.223  Sum_probs=84.5

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchH---------------HHHHHHHhhcCCCCccc---ccceEE--eCCcCCCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRK---YLSGFF--DTAVGNKRE  461 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~---------------~~~~~~l~~l~~~gl~~---~fd~i~--~~~~~~KP~  461 (526)
                      +++||+.++|+.|+++||+++|+||++.               ......++++   ++..   +|....  +.....||+
T Consensus        27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~l~~~~~~~~~~~~~~~~~~~KP~  103 (147)
T TIGR01656        27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQL---GVAVDGVLFCPHHPADNCSCRKPK  103 (147)
T ss_pred             EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhC---CCceeEEEECCCCCCCCCCCCCCC
Confidence            4889999999999999999999999874               4556677888   7752   111111  223457999


Q ss_pred             HHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          462 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       462 p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      |++|++++++++++ |++|+||||+..|+++|+++||++||+.++
T Consensus       104 ~~~~~~~~~~~~~~-~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~  147 (147)
T TIGR01656       104 PGLILEALKRLGVD-ASRSLVVGDRLRDLQAARNAGLAAVLLVDG  147 (147)
T ss_pred             HHHHHHHHHHcCCC-hHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence            99999999999997 999999999999999999999999999874

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.80  E-value=7.7e-19  Score=159.71  Aligned_cols=91  Identities=30%  Similarity=0.438  Sum_probs=82.0

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|+++|++++|+||++...+...++.+    +..+|+.++  ++.. .||+|++|.+++++++++ |
T Consensus        62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~----l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~-~  135 (154)
T TIGR01549        62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH----LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLP-P  135 (154)
T ss_pred             hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH----HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCC-C
Confidence            3357899999999999999999999999999999888874    567888887  3355 899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcC
Q 009774          478 SEILFVTDVYQEATAAKAAG  497 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG  497 (526)
                       +|+||||+..|+.+|+++|
T Consensus       136 -~~l~iGDs~~Di~aa~~aG  154 (154)
T TIGR01549       136 -EVLHVGDNLNDIEGARNAG  154 (154)
T ss_pred             -CEEEEeCCHHHHHHHHHcc
Confidence             9999999999999999998

HAD subfamilies caused by an overly broad single model.

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.80  E-value=8.2e-19  Score=167.11  Aligned_cols=103  Identities=19%  Similarity=0.210  Sum_probs=94.0

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      -+..+++.++|+.||++|+.++++||.+.... ..+..+   ++..+||.++  ...+..||+|++|+.+++++++. |+
T Consensus       112 ~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~---~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~-Pe  186 (237)
T KOG3085|consen  112 WKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPL---GLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVK-PE  186 (237)
T ss_pred             ceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhcc---CHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCC-hH
Confidence            36778999999999999999999999998876 678888   9999999999  45788999999999999999997 99


Q ss_pred             cEEEEecCH-hhHHHHHHcCCcEEEEeCCCC
Q 009774          479 EILFVTDVY-QEATAAKAAGLEVVISIRPGN  508 (526)
Q Consensus       479 ~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~  508 (526)
                      +|+||||+. +|+++|+++||.+++|.+..+
T Consensus       187 e~vhIgD~l~nD~~gA~~~G~~ailv~~~~~  217 (237)
T KOG3085|consen  187 ECVHIGDLLENDYEGARNLGWHAILVDNSIT  217 (237)
T ss_pred             HeEEecCccccccHhHHHcCCEEEEEccccc
Confidence            999999999 899999999999999987633

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=99.79  E-value=2.6e-18  Score=163.13  Aligned_cols=124  Identities=23%  Similarity=0.284  Sum_probs=104.3

Q ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--e--CCcCCCCCHHHHHHHHHHcCC
Q 009774          399 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D--TAVGNKRETPSYVEITNSLGV  474 (526)
Q Consensus       399 ~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~--~~~~~KP~p~~~~~~~~~l~~  474 (526)
                      ....+.||+.++++.|+.+|++++++|+.++.....+++++.  ++...|..++  +  ++..+||+|++|+.+++++|.
T Consensus        89 ~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~--~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~  166 (222)
T KOG2914|consen   89 MNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHE--DIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGV  166 (222)
T ss_pred             cccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhh--HHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCC
Confidence            345799999999999999999999999999999999999883  4888888776  2  367789999999999999999


Q ss_pred             CCC-CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCC
Q 009774          475 DKP-SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE  525 (526)
Q Consensus       475 ~~p-~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e  525 (526)
                      . | +.||+++|++.++++|+++||++|++....-.......+...++++.+
T Consensus       167 ~-~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~  217 (222)
T KOG2914|consen  167 P-PPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLED  217 (222)
T ss_pred             C-CccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecccccc
Confidence            7 7 999999999999999999999999998854333333344566666543

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.78  E-value=1.2e-18  Score=154.39  Aligned_cols=97  Identities=23%  Similarity=0.318  Sum_probs=85.5

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCch--------HHHHHHHHhhcCCCCcccccceEE-eCCcCCCCCHHHHHHHHHHc
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGS--------RLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSL  472 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~--------~~~~~~~l~~l~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~~~~l  472 (526)
                      .++||+.++|+.|+++|++++|+||++        ....+..++++   ++..  +.++ .. ...||+|++|+++++++
T Consensus        25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~---~l~~--~~~~~~~-~~~KP~~~~~~~~~~~~   98 (132)
T TIGR01662        25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEEL---GVPI--DVLYACP-HCRKPKPGMFLEALKRF   98 (132)
T ss_pred             eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHC---CCCE--EEEEECC-CCCCCChHHHHHHHHHc
Confidence            488999999999999999999999999        78888899999   7753  3333 33 56799999999999999


Q ss_pred             -CCCCCCcEEEEec-CHhhHHHHHHcCCcEEEEeC
Q 009774          473 -GVDKPSEILFVTD-VYQEATAAKAAGLEVVISIR  505 (526)
Q Consensus       473 -~~~~p~~~l~VgD-s~~Di~~A~~aG~~~i~v~~  505 (526)
                       +++ |++|+|||| +..|+.+|+++|+.+|++++
T Consensus        99 ~~~~-~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~~  132 (132)
T TIGR01662        99 NEID-PEESVYVGDQDLTDLQAAKRAGLAFILVAP  132 (132)
T ss_pred             CCCC-hhheEEEcCCCcccHHHHHHCCCeEEEeeC
Confidence             597 999999999 68999999999999999864

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.78  E-value=4.9e-18  Score=163.69  Aligned_cols=97  Identities=19%  Similarity=0.227  Sum_probs=85.1

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--e----------CCcCCCCCHHHHHHH
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D----------TAVGNKRETPSYVEI  468 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~----------~~~~~KP~p~~~~~~  468 (526)
                      .+++||+.++|+.|+++|++++|+||+....++.+++.+   ++..+|+..+  +          .....+|+|++|..+
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~  160 (219)
T TIGR00338        84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKL---GLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLIL  160 (219)
T ss_pred             CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc---CCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHH
Confidence            469999999999999999999999999999999999999   8888886432  1          112346789999999


Q ss_pred             HHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774          469 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       469 ~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                      +++++++ |++|+||||+.+|+.+|+++|+..+
T Consensus       161 ~~~~~~~-~~~~i~iGDs~~Di~aa~~ag~~i~  192 (219)
T TIGR00338       161 LRKEGIS-PENTVAVGDGANDLSMIKAAGLGIA  192 (219)
T ss_pred             HHHcCCC-HHHEEEEECCHHHHHHHHhCCCeEE
Confidence            9999997 9999999999999999999999754

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>COG3347 Uncharacterized conserved protein [Function unknown]

Probab=99.77  E-value=3.6e-18  Score=168.44  Aligned_cols=185  Identities=16%  Similarity=0.171  Sum_probs=141.6

Q ss_pred             HHHHHHHHHH-HcCCccccCCceEEEeCCCCC-CCCccEEEEeccCCCCCCCCCCCEEEEeCCC----CcccC-------
Q 009774           33 LISELCRHFY-TLGWVSGTGGSITIKVHDDSI-PKPQQLILMSPSGVQKERMEPEDMYVLSGNG----TTLSS-------   99 (526)
Q Consensus        33 ~l~~~~r~l~-~~gl~~~~~GNiSvR~~~~~~-~~~~~~~litpsG~~~~~l~~~div~vd~dg----~~~~g-------   99 (526)
                      +++..+|.+. +..++...|||.|+++.+..+ .++-+.+||+.||.+++.++.+.++-|.++.    +....       
T Consensus        19 ~lvY~S~liGsdp~lv~~GGGNTS~K~~~~dl~G~~v~vmwVKgSG~dl~ti~~~gf~~v~l~~Ll~l~~~~~~~d~eMV   98 (404)
T COG3347          19 LLVYRSRLIGSDPDLVLHGGGNTSVKTGETDLVGEEVEVLWVKGSGWDLATIKADGFVPVRLDPLLALKKLDKLPDEEMV   98 (404)
T ss_pred             HHHHHHhhhcCChhheecCCCccceeeeccccCCceeEEEEEeccccchhhhccCCCcccchHhHHHHHhcCCCCHHHHH
Confidence            4455555553 347788999999999976311 2233468999999999999999999888752    00000       


Q ss_pred             -----CCCCCCCCCCCCCCCchHHHHHHHHhcCcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccce
Q 009774          100 -----PSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVV  174 (526)
Q Consensus       100 -----~~~~p~~~~p~~~S~E~~lH~~iy~~~dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v  174 (526)
                           .-..|+..   +||.|+.+|..+    .-+.|.|+|+..+++++++...        .+.++.+.|.      .+
T Consensus        99 ~~l~~~~~n~~~P---rPSIET~LHAfl----P~k~VdHtH~dAiiaIa~~~n~--------~~l~~~I~Gd------~~  157 (404)
T COG3347          99 GYLRHCMLNPSAP---RPSIETLLHAFL----PFKVVDHTHADAIIAIAVQANG--------KALIREIFGD------RV  157 (404)
T ss_pred             HHHHHhhcCCCCC---CcchhhhhHhhc----CcccccccCccceeeeccCCCH--------HHHHHHhcCC------eE
Confidence                 00123222   459999999998    8899999999999999987542        2233334453      37


Q ss_pred             eeecCCCCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHH
Q 009774          175 PIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLH  238 (526)
Q Consensus       175 pv~~~~~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~  238 (526)
                      .++||.....+|+..+++.++.+|...+++|.|||+++||+|-.+||+++..+-.-|+-++..+
T Consensus       158 ~~vPYvrPGf~La~~iae~~~~~p~~~glvL~~HGL~t~gdtak~~Ye~~I~~V~~Ae~~l~~~  221 (404)
T COG3347         158 VWVPYVRPGFPLAKAIAERFKANPDAEGLVLENHGLFTFGDTAKEAYERMISIVNEAEEYLARR  221 (404)
T ss_pred             EEEeccCCCchHHHHHHHHHhhCCCceEEEeccccceEecccHHHHHHHHHHHHHHHHHHHHhh
Confidence            7888865567899999999999999999999999999999999999999999999999888776

>PLN02954 phosphoserine phosphatase

Probab=99.76  E-value=1.2e-17  Score=161.49  Aligned_cols=120  Identities=15%  Similarity=0.202  Sum_probs=92.4

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcc--cccceEE--eC------------CcCCCCCHHH
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR--KYLSGFF--DT------------AVGNKRETPS  464 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~--~~fd~i~--~~------------~~~~KP~p~~  464 (526)
                      ..++||+.++|+.|+++|++++|+||+....++.+++.+   |+.  .+|+..+  +.            ....+|+|+.
T Consensus        83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~---gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~  159 (224)
T PLN02954         83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAIL---GIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEA  159 (224)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHh---CCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHH
Confidence            468999999999999999999999999999999999999   886  3564321  11            1134678899


Q ss_pred             HHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCC-CCCCCCCCeEecCCCCC
Q 009774          465 YVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLPENHGFKTINSFAEI  526 (526)
Q Consensus       465 ~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~-~~~~~~~~~~i~~l~eL  526 (526)
                      +++++++++.+   +|+||||+.+|+.+|+++|+.++...+++.. ......++++|+++.||
T Consensus       160 i~~~~~~~~~~---~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el  219 (224)
T PLN02954        160 VQHIKKKHGYK---TMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDL  219 (224)
T ss_pred             HHHHHHHcCCC---ceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHH
Confidence            99999988764   8999999999999999988886654333222 22223348899988764

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=99.76  E-value=6.5e-18  Score=154.48  Aligned_cols=99  Identities=13%  Similarity=0.061  Sum_probs=88.3

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCc---------------hHHHHHHHHhhcCCCCcccccceEE-e------CCcCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSG---------------SRLAQRLIFGNSNYGDLRKYLSGFF-D------TAVGNK  459 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~---------------~~~~~~~~l~~l~~~gl~~~fd~i~-~------~~~~~K  459 (526)
                      ++|||+.++|++|+++|++++|+||+               ........++.+   |+.  |+.++ +      +....|
T Consensus        29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~---gl~--fd~ii~~~~~~~~~~~~~K  103 (161)
T TIGR01261        29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQ---GII--FDDVLICPHFPDDNCDCRK  103 (161)
T ss_pred             eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHC---CCc--eeEEEECCCCCCCCCCCCC
Confidence            58999999999999999999999997               355677788988   886  77554 2      356789


Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      |+|++|..++++++++ |++|+||||+..|+++|+++||.++++.++
T Consensus       104 P~~~~~~~~~~~~~~~-~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~  149 (161)
T TIGR01261       104 PKIKLLEPYLKKNLID-KARSYVIGDRETDMQLAENLGIRGIQYDEE  149 (161)
T ss_pred             CCHHHHHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHCCCeEEEEChh
Confidence            9999999999999997 999999999999999999999999999876

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.75  E-value=2.2e-18  Score=158.72  Aligned_cols=104  Identities=14%  Similarity=0.111  Sum_probs=92.6

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCc-hHHHHHHHHhhcCCCCcc---------cccceEE--eCCcCCCCCHHHHHH
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSG-SRLAQRLIFGNSNYGDLR---------KYLSGFF--DTAVGNKRETPSYVE  467 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~-~~~~~~~~l~~l~~~gl~---------~~fd~i~--~~~~~~KP~p~~~~~  467 (526)
                      .+++|||+.++|+.|+++|++++|+||+ +...++..++.+   ++.         ++|+.++  +.....||.|.++..
T Consensus        43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~---~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~  119 (174)
T TIGR01685        43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTF---EITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQK  119 (174)
T ss_pred             EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhC---CcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHH
Confidence            3479999999999999999999999998 888889999999   888         9999988  344556778888888


Q ss_pred             HHHHc--CCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCC
Q 009774          468 ITNSL--GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG  507 (526)
Q Consensus       468 ~~~~l--~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~  507 (526)
                      +.+.+  +++ |++|+||||++.|+++|+++|+.++++.++.
T Consensus       120 ~~~~~~~gl~-p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~  160 (174)
T TIGR01685       120 VNKVDPSVLK-PAQILFFDDRTDNVREVWGYGVTSCYCPSGM  160 (174)
T ss_pred             hhhcccCCCC-HHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence            87777  897 9999999999999999999999999998863

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.75  E-value=1.8e-17  Score=157.34  Aligned_cols=100  Identities=14%  Similarity=0.051  Sum_probs=85.3

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCC----------CHHHHHHH
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKR----------ETPSYVEI  468 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP----------~p~~~~~~  468 (526)
                      ++++||+.++|+.|+++|++++|+||+....++.+++.+   |+..+|+..+  +..+..||          +++.+.++
T Consensus        79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~---g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~  155 (201)
T TIGR01491        79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKL---NPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERL  155 (201)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHh---CCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHH
Confidence            479999999999999999999999999999999999999   8888887655  22332233          33688999


Q ss_pred             HHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEe
Q 009774          469 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISI  504 (526)
Q Consensus       469 ~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~  504 (526)
                      +++++++ |++|+||||+.+|+.+|+.+|+.++...
T Consensus       156 ~~~~~~~-~~~~i~iGDs~~D~~~a~~ag~~~a~~~  190 (201)
T TIGR01491       156 KRELNPS-LTETVAVGDSKNDLPMFEVADISISLGD  190 (201)
T ss_pred             HHHhCCC-HHHEEEEcCCHhHHHHHHhcCCeEEECC
Confidence            9999997 9999999999999999999999776543

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.72  E-value=2.6e-17  Score=151.43  Aligned_cols=94  Identities=16%  Similarity=0.263  Sum_probs=80.9

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchHH------------HHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHH
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSRL------------AQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEI  468 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~------------~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~  468 (526)
                      +|||+.++|+.|+++|++++|+||++..            .++..++++   |+..  +.++  +.....||+|++|+.+
T Consensus        43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~---gl~~--~~ii~~~~~~~~KP~p~~~~~~  117 (166)
T TIGR01664        43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKL---KVPI--QVLAATHAGLYRKPMTGMWEYL  117 (166)
T ss_pred             ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHc---CCCE--EEEEecCCCCCCCCccHHHHHH
Confidence            7899999999999999999999998863            456788988   7743  3444  3344579999999999


Q ss_pred             HHHcC--CCCCCcEEEEecCH--------hhHHHHHHcCCcEEE
Q 009774          469 TNSLG--VDKPSEILFVTDVY--------QEATAAKAAGLEVVI  502 (526)
Q Consensus       469 ~~~l~--~~~p~~~l~VgDs~--------~Di~~A~~aG~~~i~  502 (526)
                      +++++  ++ |++|+||||+.        .|+++|+++|+.++|
T Consensus       118 ~~~~~~~~~-~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~  160 (166)
T TIGR01664       118 QSQYNSPIK-MTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY  160 (166)
T ss_pred             HHHcCCCCC-chhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence            99999  97 99999999996        699999999999875

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.71  E-value=2.4e-16  Score=152.36  Aligned_cols=95  Identities=13%  Similarity=0.137  Sum_probs=81.0

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCc----hHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSG----SRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGV  474 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~----~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~  474 (526)
                      ..+++++.++|+.|+++|++++++||.    .....+.+++.+   |+.++|+.++  +.....||+|..   +++++++
T Consensus       113 s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~l---Gi~~~f~~i~~~d~~~~~Kp~~~~---~l~~~~i  186 (237)
T TIGR01672       113 SIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNF---HIPAMNPVIFAGDKPGQYQYTKTQ---WIQDKNI  186 (237)
T ss_pred             CcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHh---CCchheeEEECCCCCCCCCCCHHH---HHHhCCC
Confidence            357788999999999999999999998    667888889999   9999999888  344556787753   4555554


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          475 DKPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       475 ~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                           |+||||+.+|+.+|+++|+++|.+.|+
T Consensus       187 -----~i~vGDs~~DI~aAk~AGi~~I~V~~g  213 (237)
T TIGR01672       187 -----RIHYGDSDNDITAAKEAGARGIRILRA  213 (237)
T ss_pred             -----eEEEeCCHHHHHHHHHCCCCEEEEEec
Confidence                 799999999999999999999999998

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=99.68  E-value=4.6e-16  Score=143.99  Aligned_cols=95  Identities=12%  Similarity=0.160  Sum_probs=83.1

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCch-HHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcE
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGS-RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI  480 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~-~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~  480 (526)
                      .+||++.++|+.|+++|++++|+||++ ......+++.+   ++..++       ...||+|++|..++++++++ |++|
T Consensus        43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~---gl~~~~-------~~~KP~p~~~~~~l~~~~~~-~~~~  111 (170)
T TIGR01668        43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKAL---GIPVLP-------HAVKPPGCAFRRAHPEMGLT-SEQV  111 (170)
T ss_pred             CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHc---CCEEEc-------CCCCCChHHHHHHHHHcCCC-HHHE
Confidence            378999999999999999999999998 56666666777   654321       34699999999999999997 9999


Q ss_pred             EEEecCH-hhHHHHHHcCCcEEEEeCCC
Q 009774          481 LFVTDVY-QEATAAKAAGLEVVISIRPG  507 (526)
Q Consensus       481 l~VgDs~-~Di~~A~~aG~~~i~v~~~~  507 (526)
                      +||||+. .|+.+|+++||.+|++.++.
T Consensus       112 l~IGDs~~~Di~aA~~aGi~~i~v~~g~  139 (170)
T TIGR01668       112 AVVGDRLFTDVMGGNRNGSYTILVEPLV  139 (170)
T ss_pred             EEECCcchHHHHHHHHcCCeEEEEccCc
Confidence            9999998 79999999999999999884

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.66  E-value=3.4e-15  Score=137.31  Aligned_cols=185  Identities=16%  Similarity=0.188  Sum_probs=128.0

Q ss_pred             CCceEEEEeccccccccccccccchhhHHhhHHhhhhhhcCChh--hHHHHHHHHHHhHHhhhhccCCccCCCCCCCchH
Q 009774          282 LFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAE--TQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE  359 (526)
Q Consensus       282 ~~ikaVlFD~DGTL~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (526)
                      ...+.++||+|+||++.+.   .+.....+.+.+|+..+++.++  .......+...++..++    |... .+...+..
T Consensus        13 ~~~~~l~FDiDdtLYp~St---~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~a----GL~~-~~~~~d~d   84 (244)
T KOG3109|consen   13 PNYKCLFFDIDDTLYPLST---GIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMA----GLKA-VGYIFDAD   84 (244)
T ss_pred             ccceEEEEecccccccCch---hHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHH----HHHH-hcccCCHH
Confidence            4789999999999998763   2334555666677766665443  12222222232222211    1100 01111111


Q ss_pred             HHHHHHHHHHHHHHhhhhcchhhHhhhHHHHHHhhhcccccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhc
Q 009774          360 EVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS  439 (526)
Q Consensus       360 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l  439 (526)
                      +..+.+-.                          ..... .++|-+-.+.+|-.|+.++  ..+.||+.+..+.+.++.+
T Consensus        85 eY~~~V~~--------------------------~LPlq-~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~L  135 (244)
T KOG3109|consen   85 EYHRFVHG--------------------------RLPLQ-DLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKL  135 (244)
T ss_pred             HHHHHhhc--------------------------cCcHh-hcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHh
Confidence            11111111                          00111 1467788899999999874  8999999999999999999


Q ss_pred             CCCCcccccceEE--e------CCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          440 NYGDLRKYLSGFF--D------TAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       440 ~~~gl~~~fd~i~--~------~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                         |+.++|+.++  +      ....+||.++.|..+.+..|++.|.+++|++||.++|.+|++.||+++++.+.
T Consensus       136 ---GieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~  207 (244)
T KOG3109|consen  136 ---GIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGRE  207 (244)
T ss_pred             ---ChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEee
Confidence               9999999998  2      23457999999999999999966999999999999999999999999999876

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.65  E-value=2.6e-15  Score=144.89  Aligned_cols=99  Identities=12%  Similarity=0.060  Sum_probs=79.0

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc--ceEE--eCCcCCCCCHHH----------H
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--SGFF--DTAVGNKRETPS----------Y  465 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f--d~i~--~~~~~~KP~p~~----------~  465 (526)
                      +..++||+.++|+.|+++|++++|+||+....++.+++++ ... ...+  +..+  +.....||+|..          .
T Consensus        72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~-~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K  149 (219)
T PRK09552         72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK-EQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCK  149 (219)
T ss_pred             CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc-CcEEEeEEEecCCeeEEeccCCccccccccCCCch
Confidence            3579999999999999999999999999999999999875 211 1222  2233  224456888765          3


Q ss_pred             HHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774          466 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       466 ~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                      ..++++++.. +++|+||||+.+|+.+|+++|+..+
T Consensus       150 ~~~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a  184 (219)
T PRK09552        150 PSLIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFA  184 (219)
T ss_pred             HHHHHHhccC-CCCEEEEeCCHHHHHHHHHCCccee
Confidence            6799999997 9999999999999999999999433

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.65  E-value=1.2e-15  Score=154.42  Aligned_cols=115  Identities=17%  Similarity=0.184  Sum_probs=91.7

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE------------eCCcCCCCCHHHHHH
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------------DTAVGNKRETPSYVE  467 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~------------~~~~~~KP~p~~~~~  467 (526)
                      +++++||+.++|+.|+++|++++|+|++.....+.+++++   ++...+...+            ......||+++.++.
T Consensus       179 ~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~L---gld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~  255 (322)
T PRK11133        179 NLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKL---RLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTR  255 (322)
T ss_pred             hCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHc---CCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHH
Confidence            3579999999999999999999999999998888889988   7765443221            122346899999999


Q ss_pred             HHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecC
Q 009774          468 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS  522 (526)
Q Consensus       468 ~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~  522 (526)
                      +++++|++ +++|++|||+.+|+.+++.||+..++ +   ..+.....++..+++
T Consensus       256 la~~lgi~-~~qtIaVGDg~NDl~m~~~AGlgiA~-n---Akp~Vk~~Ad~~i~~  305 (322)
T PRK11133        256 LAQEYEIP-LAQTVAIGDGANDLPMIKAAGLGIAY-H---AKPKVNEQAQVTIRH  305 (322)
T ss_pred             HHHHcCCC-hhhEEEEECCHHHHHHHHHCCCeEEe-C---CCHHHHhhCCEEecC
Confidence            99999997 99999999999999999999997776 2   222223344666653

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.63  E-value=2e-15  Score=143.94  Aligned_cols=119  Identities=13%  Similarity=0.109  Sum_probs=89.4

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--e-C---CcCCCCCHHHHHHHHHHcC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D-T---AVGNKRETPSYVEITNSLG  473 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~-~---~~~~KP~p~~~~~~~~~l~  473 (526)
                      ..+++||+.++|+.|+++ ++++|+||+....++..++++   ++..+|+..+  + +   .+..+|.|.....++++++
T Consensus        66 ~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~---gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~  141 (205)
T PRK13582         66 TLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQL---GWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALK  141 (205)
T ss_pred             hCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHc---CCchhhcceEEECCCCeEECccccccchHHHHHHHHH
Confidence            346899999999999999 999999999999999999999   8988887655  1 1   1122345556677888888


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCC-CeEecCCCCC
Q 009774          474 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG-FKTINSFAEI  526 (526)
Q Consensus       474 ~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~-~~~i~~l~eL  526 (526)
                      .. +++|+||||+.+|+.+++++|+.. .+.++  .......+ ..+++++.||
T Consensus       142 ~~-~~~~v~iGDs~~D~~~~~aa~~~v-~~~~~--~~~~~~~~~~~~~~~~~el  191 (205)
T PRK13582        142 SL-GYRVIAAGDSYNDTTMLGEADAGI-LFRPP--ANVIAEFPQFPAVHTYDEL  191 (205)
T ss_pred             Hh-CCeEEEEeCCHHHHHHHHhCCCCE-EECCC--HHHHHhCCcccccCCHHHH
Confidence            86 999999999999999999999854 33332  11111222 3367777653

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=99.62  E-value=1e-15  Score=153.15  Aligned_cols=119  Identities=13%  Similarity=0.156  Sum_probs=93.3

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchHHHHH-HHHhhcCCCCcccccceEE-----eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQR-LIFGNSNYGDLRKYLSGFF-----DTAVGNKRETPSYVEITNSLGVDK  476 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~-~~l~~l~~~gl~~~fd~i~-----~~~~~~KP~p~~~~~~~~~l~~~~  476 (526)
                      -|+++.++|+.|+++|+ ++|+||.+..... ..+...   ++..+|+.+.     +....+||+|.+|..++++++++ 
T Consensus       144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~---~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~-  218 (279)
T TIGR01452       144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTP---GTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSID-  218 (279)
T ss_pred             CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCccc---ChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCC-
Confidence            48899999999998887 8999999874421 122233   6666676654     12345799999999999999997 


Q ss_pred             CCcEEEEecCH-hhHHHHHHcCCcEEEEeCC-CCCCCCC---------CCCCeEecCCCCC
Q 009774          477 PSEILFVTDVY-QEATAAKAAGLEVVISIRP-GNGPLPE---------NHGFKTINSFAEI  526 (526)
Q Consensus       477 p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~-~~~~~~~---------~~~~~~i~~l~eL  526 (526)
                      |++|+||||+. .||.+|+++||++|+|.+| +.....+         ..++++++++.||
T Consensus       219 ~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l  279 (279)
T TIGR01452       219 PARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL  279 (279)
T ss_pred             hhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence            99999999996 9999999999999999998 3322221         2459999999886

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.61  E-value=7.5e-15  Score=137.63  Aligned_cols=92  Identities=9%  Similarity=0.111  Sum_probs=77.9

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeC----------------------CcCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT----------------------AVGN  458 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~----------------------~~~~  458 (526)
                      .+++||+.++|+.|+++|++++|+||+....++..++++   ++.++|+.++..                      ....
T Consensus        71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g  147 (188)
T TIGR01489        71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGI---GEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCG  147 (188)
T ss_pred             CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHc---CChhheeEEeccCceECCCCcEEEecCCCCccCcCCCC
Confidence            479999999999999999999999999999999999999   999999988821                      1122


Q ss_pred             CCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCc
Q 009774          459 KRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLE  499 (526)
Q Consensus       459 KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~  499 (526)
                      .++++.+.+++++.    |++|+||||+.+|+.+|+++++-
T Consensus       148 ~~K~~~~~~~~~~~----~~~~i~iGD~~~D~~aa~~~d~~  184 (188)
T TIGR01489       148 CCKGKVIHKLSEPK----YQHIIYIGDGVTDVCPAKLSDVV  184 (188)
T ss_pred             CCHHHHHHHHHhhc----CceEEEECCCcchhchHhcCCcc
Confidence            34577888877654    67899999999999999999764

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.59  E-value=9.6e-15  Score=128.37  Aligned_cols=98  Identities=29%  Similarity=0.351  Sum_probs=88.6

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeC--CcCC----------------CCCHH
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT--AVGN----------------KRETP  463 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~--~~~~----------------KP~p~  463 (526)
                      .++|++.++|+.|+++|++++++||+....++..++.+   ++..+|+.++..  ....                ||++.
T Consensus        24 ~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (139)
T cd01427          24 ELYPGVKEALKELKEKGIKLALATNKSRREVLELLEEL---GLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD  100 (139)
T ss_pred             CcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHc---CCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence            58899999999999999999999999999999999999   888888888822  2222                99999


Q ss_pred             HHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEE
Q 009774          464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVIS  503 (526)
Q Consensus       464 ~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v  503 (526)
                      .+..+++.++.+ ++++++|||+.+|+.+|+++|+.++++
T Consensus       101 ~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g~~~i~v  139 (139)
T cd01427         101 KLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAGGLGVAV  139 (139)
T ss_pred             HHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence            999999999997 999999999999999999999999874

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=99.58  E-value=1.5e-15  Score=149.86  Aligned_cols=120  Identities=13%  Similarity=0.114  Sum_probs=97.4

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCC---cCCCCCHHHHHHHHHHcCCCCC
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTA---VGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~---~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      .|+++.+.++.|++.+++++++||.+..........+   |+..+|+.+.  ...   ...||+|++|+.++++++++ |
T Consensus       121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~---g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~-~  196 (257)
T TIGR01458       121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLAL---DVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCE-P  196 (257)
T ss_pred             CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCC---CchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCC-h
Confidence            4678899999999999999999999887766556666   7888888766  121   23699999999999999997 9


Q ss_pred             CcEEEEecCH-hhHHHHHHcCCcEEEEeCCC-CCC---CCCCCCCeEecCCCCC
Q 009774          478 SEILFVTDVY-QEATAAKAAGLEVVISIRPG-NGP---LPENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~-~~~---~~~~~~~~~i~~l~eL  526 (526)
                      ++|+||||+. +|+.+|+++|++++++.+|. ...   .....++++++++.||
T Consensus       197 ~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el  250 (257)
T TIGR01458       197 EEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHA  250 (257)
T ss_pred             hhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHH
Confidence            9999999996 89999999999999999873 222   1233458899988764

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=99.58  E-value=3e-14  Score=137.65  Aligned_cols=96  Identities=11%  Similarity=0.138  Sum_probs=78.7

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCc----hHHHHHHHHhhcCCCCc--ccccceEEeCCcCCCCCHHHHHHHHHHcC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSG----SRLAQRLIFGNSNYGDL--RKYLSGFFDTAVGNKRETPSYVEITNSLG  473 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~----~~~~~~~~l~~l~~~gl--~~~fd~i~~~~~~~KP~p~~~~~~~~~l~  473 (526)
                      ...|+||+.++|+.|+++|++++++||.    .....+.+++.+   |+  .++|+.++......||++..   .+++++
T Consensus       112 ~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~---gip~~~~f~vil~gd~~~K~~K~~---~l~~~~  185 (237)
T PRK11009        112 FSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDF---HIPADNMNPVIFAGDKPGQYTKTQ---WLKKKN  185 (237)
T ss_pred             cCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHc---CCCcccceeEEEcCCCCCCCCHHH---HHHhcC
Confidence            3579999999999999999999999995    455677777778   88  88998888322236887754   445444


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          474 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       474 ~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      +     ++||||+.+|+.+|++||+++|.+.|+
T Consensus       186 i-----~I~IGDs~~Di~aA~~AGi~~I~v~~G  213 (237)
T PRK11009        186 I-----RIFYGDSDNDITAAREAGARGIRILRA  213 (237)
T ss_pred             C-----eEEEcCCHHHHHHHHHcCCcEEEEecC
Confidence            4     899999999999999999999999998

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=99.56  E-value=1.3e-14  Score=127.79  Aligned_cols=87  Identities=18%  Similarity=0.221  Sum_probs=76.8

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCc-hHHHHHHHHhhcCCCC-------cccccceEEeCCcCCCCCHHHHHHHHHHcC-
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSG-SRLAQRLIFGNSNYGD-------LRKYLSGFFDTAVGNKRETPSYVEITNSLG-  473 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~-~~~~~~~~l~~l~~~g-------l~~~fd~i~~~~~~~KP~p~~~~~~~~~l~-  473 (526)
                      +|||+.++|+.|+++|++++|+||+ ........++.+   +       +.++|+.++..  ..||+|++|+++++++| 
T Consensus        30 ~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~---~~~~~i~~l~~~f~~~~~~--~~~pkp~~~~~a~~~lg~  104 (128)
T TIGR01681        30 TIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIF---EDFGIIFPLAEYFDPLTIG--YWLPKSPRLVEIALKLNG  104 (128)
T ss_pred             HHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhc---cccccchhhHhhhhhhhhc--CCCcHHHHHHHHHHHhcC
Confidence            7899999999999999999999999 888888888888   6       78888877632  24699999999999999 


Q ss_pred             -CCCCCcEEEEecCHhhHHHHHH
Q 009774          474 -VDKPSEILFVTDVYQEATAAKA  495 (526)
Q Consensus       474 -~~~p~~~l~VgDs~~Di~~A~~  495 (526)
                       +. |++|+||||+..|+...++
T Consensus       105 ~~~-p~~~l~igDs~~n~~~~~~  126 (128)
T TIGR01681       105 VLK-PKSILFVDDRPDNNEEVDY  126 (128)
T ss_pred             CCC-cceEEEECCCHhHHHHHHh
Confidence             97 9999999999999877654

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=99.53  E-value=9.6e-14  Score=133.45  Aligned_cols=94  Identities=14%  Similarity=0.104  Sum_probs=78.5

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc---ceEEe--CCcCCCCCHHHH----------
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL---SGFFD--TAVGNKRETPSY----------  465 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f---d~i~~--~~~~~KP~p~~~----------  465 (526)
                      ..++||+.++|+.|+++|++++|+|++....++.+++.+   +....|   +..++  .....||+|..+          
T Consensus        69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~---~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K  145 (214)
T TIGR03333        69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGI---VEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCK  145 (214)
T ss_pred             CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhh---CCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCH
Confidence            479999999999999999999999999999999999987   443443   23332  234568888876          


Q ss_pred             HHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCC
Q 009774          466 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGL  498 (526)
Q Consensus       466 ~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~  498 (526)
                      ..++++++.. +++|+||||+.+|+.+|+.||+
T Consensus       146 ~~~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~  177 (214)
T TIGR03333       146 PSLIRKLSEP-NDYHIVIGDSVTDVEAAKQSDL  177 (214)
T ss_pred             HHHHHHHhhc-CCcEEEEeCCHHHHHHHHhCCe
Confidence            4788888886 9999999999999999999998

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=99.53  E-value=1.7e-14  Score=132.54  Aligned_cols=85  Identities=20%  Similarity=0.308  Sum_probs=77.4

Q ss_pred             HHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHh
Q 009774          409 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQ  488 (526)
Q Consensus       409 ~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~  488 (526)
                      ..++.|+++|++++|+||++...++..++.+   ++..+|+.+       ||+|+.|+.++++++++ |++|++|||+.+
T Consensus        41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~l---gi~~~f~~~-------kpkp~~~~~~~~~l~~~-~~ev~~iGD~~n  109 (169)
T TIGR02726        41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEEL---KIKRFHEGI-------KKKTEPYAQMLEEMNIS-DAEVCYVGDDLV  109 (169)
T ss_pred             HHHHHHHHCCCEEEEEECCCcHHHHHHHHHC---CCcEEEecC-------CCCHHHHHHHHHHcCcC-HHHEEEECCCHH
Confidence            4677888999999999999999999999999   898887643       89999999999999997 999999999999


Q ss_pred             hHHHHHHcCCcEEEEe
Q 009774          489 EATAAKAAGLEVVISI  504 (526)
Q Consensus       489 Di~~A~~aG~~~i~v~  504 (526)
                      |+.+++.+|+..+.-+
T Consensus       110 Di~~~~~ag~~~am~n  125 (169)
T TIGR02726       110 DLSMMKRVGLAVAVGD  125 (169)
T ss_pred             HHHHHHHCCCeEECcC
Confidence            9999999999877544

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=99.52  E-value=1.5e-14  Score=131.65  Aligned_cols=85  Identities=13%  Similarity=0.182  Sum_probs=76.7

Q ss_pred             HHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhh
Q 009774          410 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE  489 (526)
Q Consensus       410 ~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~D  489 (526)
                      +|++|+++|++++|+||.+...+...++.+   |+..+|+.       .||+|+.+++++++++++ |++|+||||+.+|
T Consensus        36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~---gi~~~~~~-------~~~k~~~~~~~~~~~~~~-~~~~~~vGDs~~D  104 (154)
T TIGR01670        36 GIRCALKSGIEVAIITGRKAKLVEDRCKTL---GITHLYQG-------QSNKLIAFSDILEKLALA-PENVAYIGDDLID  104 (154)
T ss_pred             HHHHHHHCCCEEEEEECCCCHHHHHHHHHc---CCCEEEec-------ccchHHHHHHHHHHcCCC-HHHEEEECCCHHH
Confidence            899999999999999999999999999999   88877653       388999999999999997 9999999999999


Q ss_pred             HHHHHHcCCcEEEEeCC
Q 009774          490 ATAAKAAGLEVVISIRP  506 (526)
Q Consensus       490 i~~A~~aG~~~i~v~~~  506 (526)
                      +.+++++|+. +.+...
T Consensus       105 ~~~~~~ag~~-~~v~~~  120 (154)
T TIGR01670       105 WPVMEKVGLS-VAVADA  120 (154)
T ss_pred             HHHHHHCCCe-EecCCc
Confidence            9999999997 555543

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=99.52  E-value=2.3e-13  Score=130.08  Aligned_cols=89  Identities=26%  Similarity=0.335  Sum_probs=79.0

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE-eCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      .+++|++.++|+.|+++|++++++|+.+......+.+.+   |+.   +.++ .... .||++.+|..++++++++ +++
T Consensus       126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~l---gi~---~~~v~a~~~-~kP~~k~~~~~i~~l~~~-~~~  197 (215)
T PF00702_consen  126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQL---GIF---DSIVFARVI-GKPEPKIFLRIIKELQVK-PGE  197 (215)
T ss_dssp             EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHT---TSC---SEEEEESHE-TTTHHHHHHHHHHHHTCT-GGG
T ss_pred             CcchhhhhhhhhhhhccCcceeeeecccccccccccccc---ccc---ccccccccc-ccccchhHHHHHHHHhcC-CCE
Confidence            478999999999999999999999999999999999999   873   3222 2211 799999999999999997 999


Q ss_pred             EEEEecCHhhHHHHHHcC
Q 009774          480 ILFVTDVYQEATAAKAAG  497 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~aG  497 (526)
                      |+||||+.+|+.++++||
T Consensus       198 v~~vGDg~nD~~al~~Ag  215 (215)
T PF00702_consen  198 VAMVGDGVNDAPALKAAG  215 (215)
T ss_dssp             EEEEESSGGHHHHHHHSS
T ss_pred             EEEEccCHHHHHHHHhCc
Confidence            999999999999999997

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=99.50  E-value=8.6e-14  Score=123.29  Aligned_cols=90  Identities=13%  Similarity=0.201  Sum_probs=79.3

Q ss_pred             CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 009774          405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVT  484 (526)
Q Consensus       405 pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~Vg  484 (526)
                      |.+.+-+..++++|+++.|+||+++..+....+++   |+.    .++   ...||-+..|.+++++++++ |++|+|||
T Consensus        49 pe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l---~v~----fi~---~A~KP~~~~fr~Al~~m~l~-~~~vvmVG  117 (175)
T COG2179          49 PELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL---GVP----FIY---RAKKPFGRAFRRALKEMNLP-PEEVVMVG  117 (175)
T ss_pred             HHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc---CCc----eee---cccCccHHHHHHHHHHcCCC-hhHEEEEc
Confidence            45556677889999999999999999999889988   543    332   56799999999999999997 99999999


Q ss_pred             cCH-hhHHHHHHcCCcEEEEeC
Q 009774          485 DVY-QEATAAKAAGLEVVISIR  505 (526)
Q Consensus       485 Ds~-~Di~~A~~aG~~~i~v~~  505 (526)
                      |.. .||.+++.+||++|.|..
T Consensus       118 DqL~TDVlggnr~G~~tIlV~P  139 (175)
T COG2179         118 DQLFTDVLGGNRAGMRTILVEP  139 (175)
T ss_pred             chhhhhhhcccccCcEEEEEEE
Confidence            999 899999999999999975

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=99.48  E-value=3e-13  Score=137.89  Aligned_cols=100  Identities=16%  Similarity=0.121  Sum_probs=86.8

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCc---------------hHHHHHHHHhhcCCCCcccccceEE-e------CCcCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSG---------------SRLAQRLIFGNSNYGDLRKYLSGFF-D------TAVGN  458 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~---------------~~~~~~~~l~~l~~~gl~~~fd~i~-~------~~~~~  458 (526)
                      .++|||+.++|++|+++|++++|+||+               +......+++.+   ++.  |+.++ +      .....
T Consensus        29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~---gl~--fd~i~i~~~~~sd~~~~r  103 (354)
T PRK05446         29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQ---GIK--FDEVLICPHFPEDNCSCR  103 (354)
T ss_pred             ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHc---CCc--eeeEEEeCCcCcccCCCC
Confidence            479999999999999999999999996               344566677887   773  77654 2      34577


Q ss_pred             CCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          459 KRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       459 KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      ||+|++|..++++++++ |++|+||||+.+|+++|+++||++|++++.
T Consensus       104 KP~p~~l~~a~~~l~v~-~~~svmIGDs~sDi~aAk~aGi~~I~v~~~  150 (354)
T PRK05446        104 KPKTGLVEEYLAEGAID-LANSYVIGDRETDVQLAENMGIKGIRYARE  150 (354)
T ss_pred             CCCHHHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHCCCeEEEEECC
Confidence            99999999999999997 999999999999999999999999999764

>KOG3699 consensus Cytoskeletal protein Adducin [Signal transduction mechanisms; Cytoskeleton]

Probab=99.46  E-value=1.8e-13  Score=142.32  Aligned_cols=157  Identities=15%  Similarity=0.155  Sum_probs=116.2

Q ss_pred             CCCCCCCCCCEEEEeCCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCccccc
Q 009774           77 VQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRIT  155 (526)
Q Consensus        77 ~~~~~l~~~div~vd~dg~~~~g~~~~p~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~  155 (526)
                      ..+.++|.+.+++|+..|++++.+..+-..    + .+-+.+|.+||.+| ||+||||.|.+...|.+.+.++  .+|++
T Consensus        87 ~~~he~tas~l~kv~~~g~iv~qgs~~~~v----n-~sgf~lhsai~~a~p~vrc~ihi~t~~~aavs~mk~g--llp~s  159 (598)
T KOG3699|consen   87 LLYHEITASSLVKVNIQGEIVDQGSTNLGV----N-QSGFFLHSAIYAARPDVRCIIHIHTSAVAAVSSMKCG--LLPLS  159 (598)
T ss_pred             hhhhhcccccceeecccchhhhcccccccc----c-ccccchhhhhhccCCceeEEEEeccchHHHHHHhhhc--ccccc
Confidence            778899999999999999999754222211    1 34589999999999 9999999999999999998773  45555


Q ss_pred             HHHHHhhhcCCcccCccceeeecCCCCchHHH--HHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHH
Q 009774          156 HMEMIKGIKGHGYYDELVVPIIENTAYENELT--DSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDA  233 (526)
Q Consensus       156 ~~~~~~~~~g~~~~~~~~vpv~~~~~~~~~la--~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~  233 (526)
                      +..+.  + |       .|.+.+|.+.-.+-.  ..+...|+.   +++++|+|||++++|+|++|||+.+..+.-+|++
T Consensus       160 ~~a~~--l-g-------~~~~~dy~~~~e~~~~~~~~~~~lg~---~kvl~lrN~g~~~~g~t~eeA~~~~~~~~~ace~  226 (598)
T KOG3699|consen  160 QEALV--L-G-------EVAYYDYQGILEDEEERIPLQKNLGP---KKVLVLRNHGVVSVGETVEEAFYYIFNLVLACEI  226 (598)
T ss_pred             ccccc--c-c-------ceeeeecccccccchhhhhHHhhcCc---cceEEEecccccccchhHHHHHHHhhcchhhhhh
Confidence            54332  2 3       377777765322222  234445553   3999999999999999999999999999999999


Q ss_pred             HHHHHhCCCCC-CCCCCCccc
Q 009774          234 AIKLHQLGLDW-STPNHGPTR  253 (526)
Q Consensus       234 ~~~a~~~g~~~-~~~~~~~~~  253 (526)
                      ++.+.+-|-.. .+++.+..+
T Consensus       227 qv~~~a~g~dnl~~~~~~~~~  247 (598)
T KOG3699|consen  227 QVSASAGGLDNLILLEEEKYK  247 (598)
T ss_pred             hhhhcccCccccccCcHhhhh
Confidence            99966656443 334553333

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=99.45  E-value=1.3e-12  Score=124.19  Aligned_cols=97  Identities=7%  Similarity=0.106  Sum_probs=82.4

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccce-EE--eC----------CcCCCCCHHHHHHH
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSG-FF--DT----------AVGNKRETPSYVEI  468 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~-i~--~~----------~~~~KP~p~~~~~~  468 (526)
                      .++|++.++|+.++++|++++|+||++...++.+++++   |+..+|.. +.  ++          ...+++++..++..
T Consensus        87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~l---g~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~  163 (202)
T TIGR01490        87 ILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARIL---GIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAEL  163 (202)
T ss_pred             hccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHc---CCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHH
Confidence            68999999999999999999999999999999999999   88877755 21  11          11235567778999


Q ss_pred             HHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774          469 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI  502 (526)
Q Consensus       469 ~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~  502 (526)
                      +++.+++ +++|++||||.+|+..++.+|..++.
T Consensus       164 ~~~~~~~-~~~~~~~gDs~~D~~~~~~a~~~~~v  196 (202)
T TIGR01490       164 LAEEQID-LKDSYAYGDSISDLPLLSLVGHPYVV  196 (202)
T ss_pred             HHHcCCC-HHHcEeeeCCcccHHHHHhCCCcEEe
Confidence            9999997 99999999999999999999987654

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=99.45  E-value=1.8e-12  Score=120.40  Aligned_cols=92  Identities=13%  Similarity=0.094  Sum_probs=76.4

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--e-C-----------CcCCCCCHHHHH
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D-T-----------AVGNKRETPSYV  466 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~-~-----------~~~~KP~p~~~~  466 (526)
                      ..++||+.++|+.++++|++++|+|++....++.+++++   |+..+|...+  + +           ......++..+.
T Consensus        72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~---g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~  148 (177)
T TIGR01488        72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKL---GIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLK  148 (177)
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc---CCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHH
Confidence            458899999999999999999999999999999999999   8887776544  1 1           111233467888


Q ss_pred             HHHHHcCCCCCCcEEEEecCHhhHHHHHHc
Q 009774          467 EITNSLGVDKPSEILFVTDVYQEATAAKAA  496 (526)
Q Consensus       467 ~~~~~l~~~~p~~~l~VgDs~~Di~~A~~a  496 (526)
                      ..+++++++ +++|++|||+.+|+.+++.+
T Consensus       149 ~~~~~~~~~-~~~~~~iGDs~~D~~~~~~a  177 (177)
T TIGR01488       149 ELLEESKIT-LKKIIAVGDSVNDLPMLKLA  177 (177)
T ss_pred             HHHHHhCCC-HHHEEEEeCCHHHHHHHhcC
Confidence            889999997 99999999999999998754

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>PRK10444 UMP phosphatase; Provisional

Probab=99.42  E-value=2.9e-13  Score=132.71  Aligned_cols=71  Identities=18%  Similarity=0.059  Sum_probs=59.8

Q ss_pred             CcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCH-hhHHHHHHcCCcEEEEeCC-CCCCCC---CCCCCeEecCCCCC
Q 009774          455 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRP-GNGPLP---ENHGFKTINSFAEI  526 (526)
Q Consensus       455 ~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~-~~~~~~---~~~~~~~i~~l~eL  526 (526)
                      ...+||+|++|..++++++++ |++|+||||+. +|+.+|+++|++++++.+| ......   ...++++++|+.||
T Consensus       170 ~~~gKP~~~~~~~~~~~~~~~-~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el  245 (248)
T PRK10444        170 FYVGKPSPWIIRAALNKMQAH-SEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI  245 (248)
T ss_pred             cccCCCCHHHHHHHHHHcCCC-cccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence            345799999999999999997 99999999997 8999999999999999988 332222   23458999998775

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=99.41  E-value=5.8e-13  Score=134.74  Aligned_cols=102  Identities=14%  Similarity=0.050  Sum_probs=93.1

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccc-ccceEE--e-------CCcCCCCCHHHHHHHHHH
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFF--D-------TAVGNKRETPSYVEITNS  471 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~-~fd~i~--~-------~~~~~KP~p~~~~~~~~~  471 (526)
                      .++|++.++|+.|+++|++++++||.+....+..++.+   ++.+ +|+.++  +       .....||+|+++..++++
T Consensus       187 ~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l---~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~  263 (300)
T PHA02530        187 KPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL---RQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWE  263 (300)
T ss_pred             CCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH---HHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHH
Confidence            68999999999999999999999999999999999999   8886 899887  3       234679999999999999


Q ss_pred             cCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          472 LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       472 l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      ++.++|++|+||||+..|+++|+++||.+|+|.||
T Consensus       264 ~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g  298 (300)
T PHA02530        264 KIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG  298 (300)
T ss_pred             HhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence            98832799999999999999999999999999886

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=99.40  E-value=3.6e-13  Score=126.14  Aligned_cols=82  Identities=12%  Similarity=0.221  Sum_probs=73.4

Q ss_pred             HHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHh
Q 009774          409 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQ  488 (526)
Q Consensus       409 ~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~  488 (526)
                      ..++.|+++|++++|+||.+...+...++.+   |+..+|+       ..+++++.++++++++|++ |++|+||||+.+
T Consensus        55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~l---gl~~~f~-------g~~~k~~~l~~~~~~~gl~-~~ev~~VGDs~~  123 (183)
T PRK09484         55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTL---GITHLYQ-------GQSNKLIAFSDLLEKLAIA-PEQVAYIGDDLI  123 (183)
T ss_pred             HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHc---CCceeec-------CCCcHHHHHHHHHHHhCCC-HHHEEEECCCHH
Confidence            4677788899999999999999999999999   8877665       3467789999999999997 999999999999


Q ss_pred             hHHHHHHcCCcEE
Q 009774          489 EATAAKAAGLEVV  501 (526)
Q Consensus       489 Di~~A~~aG~~~i  501 (526)
                      |+.+|+++|+.++
T Consensus       124 D~~~a~~aG~~~~  136 (183)
T PRK09484        124 DWPVMEKVGLSVA  136 (183)
T ss_pred             HHHHHHHCCCeEe
Confidence            9999999999854

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=99.39  E-value=8.5e-13  Score=129.78  Aligned_cols=121  Identities=17%  Similarity=0.129  Sum_probs=85.2

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCCcE
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSEI  480 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~~~  480 (526)
                      .|+.....+..|+ +|.+ .++||.+.......--....+.+...+....  +.....||+|++|..++++++++ |++|
T Consensus       122 ~y~~l~~a~~~l~-~g~~-~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~-~~~~  198 (249)
T TIGR01457       122 DYEKFATATLAIR-KGAH-FIGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTE-REET  198 (249)
T ss_pred             CHHHHHHHHHHHH-CCCe-EEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCC-cccE
Confidence            4566777777775 5776 8889987653311000011113333333333  33456799999999999999997 9999


Q ss_pred             EEEecCH-hhHHHHHHcCCcEEEEeCCCC-CCCCC---CCCCeEecCCCCC
Q 009774          481 LFVTDVY-QEATAAKAAGLEVVISIRPGN-GPLPE---NHGFKTINSFAEI  526 (526)
Q Consensus       481 l~VgDs~-~Di~~A~~aG~~~i~v~~~~~-~~~~~---~~~~~~i~~l~eL  526 (526)
                      +||||+. +|+.+|+++|++++++.++.. .....   ..++++++++.|+
T Consensus       199 ~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~  249 (249)
T TIGR01457       199 LMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW  249 (249)
T ss_pred             EEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence            9999997 899999999999999999832 22221   3458999999875

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR01686 FkbH FkbH-like domain

Probab=99.36  E-value=3.1e-12  Score=130.48  Aligned_cols=90  Identities=13%  Similarity=0.106  Sum_probs=83.0

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhh----cCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN----SNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~----l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      +|||+.++|+.|+++|++++|+||++...+...+++    +   ++.++|+.+..   ..||+|+.++.+++++|+. |+
T Consensus        32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~---~~~~~f~~~~~---~~~pk~~~i~~~~~~l~i~-~~  104 (320)
T TIGR01686        32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFI---LQAEDFDARSI---NWGPKSESLRKIAKKLNLG-TD  104 (320)
T ss_pred             cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCcccc---CcHHHeeEEEE---ecCchHHHHHHHHHHhCCC-cC
Confidence            679999999999999999999999999999999998    7   88889988753   3799999999999999997 99


Q ss_pred             cEEEEecCHhhHHHHHHcCCc
Q 009774          479 EILFVTDVYQEATAAKAAGLE  499 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~  499 (526)
                      +|+||||++.|+.++++++-.
T Consensus       105 ~~vfidD~~~d~~~~~~~lp~  125 (320)
T TIGR01686       105 SFLFIDDNPAERANVKITLPV  125 (320)
T ss_pred             cEEEECCCHHHHHHHHHHCCC
Confidence            999999999999999998764

The C-terminal portion of this domain is unique to this family (by BLAST).

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=99.34  E-value=3.4e-12  Score=136.42  Aligned_cols=90  Identities=20%  Similarity=0.335  Sum_probs=77.6

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchH------------HHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHH
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSR------------LAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEI  468 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~------------~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~  468 (526)
                      +|||+.+.|+.|++.||+++|+||.+.            ..+..+++.+   |+.  |+.++  +....+||+|.++.++
T Consensus       198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~l---gip--fdviia~~~~~~RKP~pGm~~~a  272 (526)
T TIGR01663       198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKL---GVP--FQVFIAIGAGFYRKPLTGMWDHL  272 (526)
T ss_pred             cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHc---CCc--eEEEEeCCCCCCCCCCHHHHHHH
Confidence            689999999999999999999999877            3467788888   774  88776  3456789999999999


Q ss_pred             HHHcC----CCCCCcEEEEecCHhhHHHHHHcCC
Q 009774          469 TNSLG----VDKPSEILFVTDVYQEATAAKAAGL  498 (526)
Q Consensus       469 ~~~l~----~~~p~~~l~VgDs~~Di~~A~~aG~  498 (526)
                      +++++    ++ +++|+||||+..|+.+|+++|-
T Consensus       273 ~~~~~~~~~Id-~~~S~~VGDaagr~~~g~~ag~  305 (526)
T TIGR01663       273 KEEANDGTEIQ-EDDCFFVGDAAGRPANGKAAGK  305 (526)
T ss_pred             HHhcCcccCCC-HHHeEEeCCcccchHHHHhcCC
Confidence            99995    87 9999999999988888777765

Note that the EC number for the kinase function is: 2.7.1.78

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.34  E-value=1.3e-12  Score=117.99  Aligned_cols=93  Identities=18%  Similarity=0.160  Sum_probs=82.4

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccc-ccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~-~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      +.++||+.++|+.|+ ++++++|+||++...++.+++++   ++.. +|+.++  +++...||+   |++++++++++ |
T Consensus        44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l---~~~~~~f~~i~~~~d~~~~KP~---~~k~l~~l~~~-p  115 (148)
T smart00577       44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLL---DPKKYFGYRRLFRDECVFVKGK---YVKDLSLLGRD-L  115 (148)
T ss_pred             EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHh---CcCCCEeeeEEECccccccCCe---EeecHHHcCCC-h
Confidence            468999999999999 57999999999999999999999   7865 458877  456777886   99999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEE
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                      ++|+||||++.|+.+|+++|+..-
T Consensus       116 ~~~i~i~Ds~~~~~aa~~ngI~i~  139 (148)
T smart00577      116 SNVIIIDDSPDSWPFHPENLIPIK  139 (148)
T ss_pred             hcEEEEECCHHHhhcCccCEEEec
Confidence            999999999999999999988653

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=99.33  E-value=2.6e-11  Score=115.26  Aligned_cols=98  Identities=14%  Similarity=0.081  Sum_probs=79.9

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eC-------CcCCCCCHHHHHHHHHH
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DT-------AVGNKRETPSYVEITNS  471 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~-------~~~~KP~p~~~~~~~~~  471 (526)
                      ++++||+.++|+.|+++| +++|+||+.....+.+++.+   |+..+|...+  ++       ....||.+..+.+.+++
T Consensus        67 i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~l---gi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~  142 (203)
T TIGR02137        67 LKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQL---GFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKS  142 (203)
T ss_pred             CCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHc---CCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHh
Confidence            469999999999999975 99999999999999999999   9988887322  21       11346777777776665


Q ss_pred             cCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          472 LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       472 l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      .+    .+|++|||+.+|+..++.+|+..++...+
T Consensus       143 ~~----~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~  173 (203)
T TIGR02137       143 LY----YRVIAAGDSYNDTTMLSEAHAGILFHAPE  173 (203)
T ss_pred             hC----CCEEEEeCCHHHHHHHHhCCCCEEecCCH
Confidence            44    37999999999999999999998887654

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>PLN02645 phosphoglycolate phosphatase

Probab=99.33  E-value=1.9e-12  Score=131.52  Aligned_cols=115  Identities=10%  Similarity=0.044  Sum_probs=83.9

Q ss_pred             HHHHHHHHHCCCeEEEEeCchHHH-HHHHHhhcCCCCcccccceEE--eC---CcCCCCCHHHHHHHHHHcCCCCCCcEE
Q 009774          408 PEALEKWHSLGTKVYIYSSGSRLA-QRLIFGNSNYGDLRKYLSGFF--DT---AVGNKRETPSYVEITNSLGVDKPSEIL  481 (526)
Q Consensus       408 ~~~L~~L~~~G~~l~vvTn~~~~~-~~~~l~~l~~~gl~~~fd~i~--~~---~~~~KP~p~~~~~~~~~l~~~~p~~~l  481 (526)
                      ......|+.++-.++|+||.+... ....+...   |...+|+.+.  +.   ...+||+|.+|..++++++++ +++|+
T Consensus       176 ~~a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~---g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~-~~~~~  251 (311)
T PLN02645        176 QYATLCIRENPGCLFIATNRDAVTHLTDAQEWA---GAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIE-KSQIC  251 (311)
T ss_pred             HHHHHHHhcCCCCEEEEeCCCCCCCCCCCCCcc---chHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCC-cccEE
Confidence            334556654322599999998743 22233344   6777788776  22   123599999999999999997 99999


Q ss_pred             EEecCH-hhHHHHHHcCCcEEEEeCC-CCCCCC-----CCCCCeEecCCCCC
Q 009774          482 FVTDVY-QEATAAKAAGLEVVISIRP-GNGPLP-----ENHGFKTINSFAEI  526 (526)
Q Consensus       482 ~VgDs~-~Di~~A~~aG~~~i~v~~~-~~~~~~-----~~~~~~~i~~l~eL  526 (526)
                      ||||++ +||.+|+++|+++|+|.+| ++....     ...++++++++.||
T Consensus       252 ~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l  303 (311)
T PLN02645        252 MVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDF  303 (311)
T ss_pred             EEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHH
Confidence            999998 9999999999999999988 332221     13358999887654

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=99.31  E-value=3.8e-12  Score=124.68  Aligned_cols=69  Identities=29%  Similarity=0.352  Sum_probs=57.2

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCCcEEEEecCH-hhHHHHHHcCCcEEEEeCCCC-CCCC---CCCCCeEecCCCCC
Q 009774          457 GNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRPGN-GPLP---ENHGFKTINSFAEI  526 (526)
Q Consensus       457 ~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~-~~~~---~~~~~~~i~~l~eL  526 (526)
                      .+||.|.+|..+++.++.+ +++|+||||+. +||.+|+++||.+++|..|-+ ....   +..++++++|+.|+
T Consensus       188 ~GKP~~~i~~~al~~~~~~-~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~  261 (269)
T COG0647         188 IGKPSPAIYEAALEKLGLD-RSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAEL  261 (269)
T ss_pred             cCCCCHHHHHHHHHHhCCC-cccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHH
Confidence            3599999999999999997 99999999999 899999999999999999833 2222   23347888877653

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.26  E-value=1.3e-10  Score=111.20  Aligned_cols=98  Identities=18%  Similarity=0.216  Sum_probs=84.8

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCC---c-------CCCCCHHHHHHH
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTA---V-------GNKRETPSYVEI  468 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~---~-------~~KP~p~~~~~~  468 (526)
                      .+++||+.++++.++++|++++|+|.+.....+.+.+.+   |+...+...+  ++.   +       ..+-+-.....+
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~l---g~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~  152 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERL---GIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALREL  152 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHh---CCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHH
Confidence            579999999999999999999999999999999999999   9988887766  221   1       123356777889


Q ss_pred             HHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774          469 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI  502 (526)
Q Consensus       469 ~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~  502 (526)
                      ++.+|++ +++++.+|||.+|+..-..+|...++
T Consensus       153 ~~~~g~~-~~~~~a~gDs~nDlpml~~ag~~ia~  185 (212)
T COG0560         153 AAELGIP-LEETVAYGDSANDLPMLEAAGLPIAV  185 (212)
T ss_pred             HHHcCCC-HHHeEEEcCchhhHHHHHhCCCCeEe
Confidence            9999997 99999999999999999999988765

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=99.25  E-value=5e-11  Score=109.48  Aligned_cols=99  Identities=20%  Similarity=0.245  Sum_probs=83.8

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCch---------------HHHHHHHHhhcCCCCcccccceEE-------eCCcCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGS---------------RLAQRLIFGNSNYGDLRKYLSGFF-------DTAVGNK  459 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~---------------~~~~~~~l~~l~~~gl~~~fd~i~-------~~~~~~K  459 (526)
                      ++.||+.+.|..|++.||+++|+||.+               ...+...++..   |.  .||.++       +.+..+|
T Consensus        31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~---gv--~id~i~~Cph~p~~~c~cRK  105 (181)
T COG0241          31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQ---GV--KIDGILYCPHHPEDNCDCRK  105 (181)
T ss_pred             ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHc---CC--ccceEEECCCCCCCCCcccC
Confidence            588999999999999999999999964               11233344444   54  588887       2367889


Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      |.|.+|..++++++++ +++.++|||+.+|+++|.++|++.+.+.++
T Consensus       106 P~~gm~~~~~~~~~iD-~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~  151 (181)
T COG0241         106 PKPGMLLSALKEYNID-LSRSYVVGDRLTDLQAAENAGIKGVLVLTG  151 (181)
T ss_pred             CChHHHHHHHHHhCCC-ccceEEecCcHHHHHHHHHCCCCceEEEcC
Confidence            9999999999999998 999999999999999999999998888876

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=99.24  E-value=9.9e-12  Score=98.70  Aligned_cols=69  Identities=25%  Similarity=0.291  Sum_probs=59.8

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCCcEEEEecC-HhhHHHHHHcCCcEEEEeCCC-CCCCC---CCCCCeEecCCCCC
Q 009774          457 GNKRETPSYVEITNSLGVDKPSEILFVTDV-YQEATAAKAAGLEVVISIRPG-NGPLP---ENHGFKTINSFAEI  526 (526)
Q Consensus       457 ~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs-~~Di~~A~~aG~~~i~v~~~~-~~~~~---~~~~~~~i~~l~eL  526 (526)
                      .+||+|.+|..++++++++ |++|+||||+ ..||.+|+++|+.+|+|.+|. .....   ...+++++++|.|+
T Consensus         2 ~gKP~p~~~~~a~~~~~~~-~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~   75 (75)
T PF13242_consen    2 CGKPSPGMLEQALKRLGVD-PSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA   75 (75)
T ss_dssp             CSTTSHHHHHHHHHHHTSG-GGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred             CCCCcHHHHHHHHHHcCCC-HHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence            4799999999999999997 9999999999 699999999999999999983 33322   24559999999875

...

>PTZ00445 p36-lilke protein; Provisional

Probab=99.22  E-value=4.2e-11  Score=111.30  Aligned_cols=100  Identities=14%  Similarity=0.158  Sum_probs=78.5

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchHHH---------------HHHHHhhcCCCCcccccceEE-------eC------
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSRLA---------------QRLIFGNSNYGDLRKYLSGFF-------DT------  454 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~---------------~~~~l~~l~~~gl~~~fd~i~-------~~------  454 (526)
                      +.|+...++++|++.|++++|||=++...               ++..++..   +-.-....++       +.      
T Consensus        76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s---~~~~~i~~~~~yyp~~w~~p~~y~~  152 (219)
T PTZ00445         76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKS---KCDFKIKKVYAYYPKFWQEPSDYRP  152 (219)
T ss_pred             CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhc---CccceeeeeeeeCCcccCChhhhhh
Confidence            55778889999999999999999987643               45555543   2222222222       11      


Q ss_pred             CcCCCCCHHH--H--HHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          455 AVGNKRETPS--Y--VEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       455 ~~~~KP~p~~--~--~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      .+..||+|++  |  ++++++.|++ |++|+||+|+..++++|++.|+.++.+..+
T Consensus       153 ~gl~KPdp~iK~yHle~ll~~~gl~-peE~LFIDD~~~NVeaA~~lGi~ai~f~~~  207 (219)
T PTZ00445        153 LGLDAPMPLDKSYHLKQVCSDFNVN-PDEILFIDDDMNNCKNALKEGYIALHVTGN  207 (219)
T ss_pred             hcccCCCccchHHHHHHHHHHcCCC-HHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence            3556999999  9  9999999997 999999999999999999999999998754

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=99.19  E-value=3.9e-10  Score=110.86  Aligned_cols=93  Identities=15%  Similarity=0.180  Sum_probs=81.6

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceE------E--eCCcCCCCCH---------
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGF------F--DTAVGNKRET---------  462 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i------~--~~~~~~KP~p---------  462 (526)
                      .+.+.||+.++|+.|+++|++++|+|++....++..++.+   |+.+.+..+      +  +....+||.|         
T Consensus       119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~l---gl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~  195 (277)
T TIGR01544       119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQA---GVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNH  195 (277)
T ss_pred             CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHc---CCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHH
Confidence            4679999999999999999999999999999999999999   887777777      3  2344568888         


Q ss_pred             HHHHHHHHHcC--CCCCCcEEEEecCHhhHHHHHHc
Q 009774          463 PSYVEITNSLG--VDKPSEILFVTDVYQEATAAKAA  496 (526)
Q Consensus       463 ~~~~~~~~~l~--~~~p~~~l~VgDs~~Di~~A~~a  496 (526)
                      ..++.+++.++  .. +++|++|||+.+|+.+|..+
T Consensus       196 ~v~~~~~~~~~~~~~-~~~vI~vGDs~~Dl~ma~g~  230 (277)
T TIGR01544       196 DVALRNTEYFNQLKD-RSNIILLGDSQGDLRMADGV  230 (277)
T ss_pred             HHHHHHHHHhCccCC-cceEEEECcChhhhhHhcCC
Confidence            78888999998  76 99999999999999997766

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=99.18  E-value=8.9e-11  Score=107.30  Aligned_cols=100  Identities=21%  Similarity=0.308  Sum_probs=73.9

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEe-CchHHHHHHHHhhcCCCCcc----------cccceEEeCCcCCCCCHHHHHHH
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYS-SGSRLAQRLIFGNSNYGDLR----------KYLSGFFDTAVGNKRETPSYVEI  468 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvT-n~~~~~~~~~l~~l~~~gl~----------~~fd~i~~~~~~~KP~p~~~~~~  468 (526)
                      .+.+||++.++|+.|+++|++++++| +...+.++..|+.+   ++.          ++|+..- ...+  .+...|..+
T Consensus        43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l---~i~~~~~~~~~~~~~F~~~e-I~~g--sK~~Hf~~i  116 (169)
T PF12689_consen   43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLL---EIDDADGDGVPLIEYFDYLE-IYPG--SKTTHFRRI  116 (169)
T ss_dssp             EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHT---T-C----------CCECEEE-ESSS---HHHHHHHH
T ss_pred             EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhc---CCCccccccccchhhcchhh-eecC--chHHHHHHH
Confidence            34799999999999999999999999 45677889999999   888          8887732 2222  557899999


Q ss_pred             HHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          469 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       469 ~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      .++.|++ .++++|++|...+++...+.|+.++++.+|
T Consensus       117 ~~~tgI~-y~eMlFFDDe~~N~~~v~~lGV~~v~v~~G  153 (169)
T PF12689_consen  117 HRKTGIP-YEEMLFFDDESRNIEVVSKLGVTCVLVPDG  153 (169)
T ss_dssp             HHHH----GGGEEEEES-HHHHHHHHTTT-EEEE-SSS
T ss_pred             HHhcCCC-hhHEEEecCchhcceeeEecCcEEEEeCCC
Confidence            9999997 999999999999999999999999999886

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PRK08238 hypothetical protein; Validated

Probab=99.15  E-value=5.1e-10  Score=119.27  Aligned_cols=94  Identities=13%  Similarity=0.185  Sum_probs=78.1

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      +++||+.++|++++++|++++++||+++...+.+++++   |+   ||.++  +.....||+++.- .+.+.++   .++
T Consensus        72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~l---Gl---Fd~Vigsd~~~~~kg~~K~~-~l~~~l~---~~~  141 (479)
T PRK08238         72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHL---GL---FDGVFASDGTTNLKGAAKAA-ALVEAFG---ERG  141 (479)
T ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc---CC---CCEEEeCCCccccCCchHHH-HHHHHhC---ccC
Confidence            57899999999999999999999999999999999999   76   88888  4455667766543 3445554   347


Q ss_pred             EEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          480 ILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      ++|+||+.+|+..++.+| +.+.|+.+
T Consensus       142 ~~yvGDS~~Dlp~~~~A~-~av~Vn~~  167 (479)
T PRK08238        142 FDYAGNSAADLPVWAAAR-RAIVVGAS  167 (479)
T ss_pred             eeEecCCHHHHHHHHhCC-CeEEECCC
Confidence            999999999999999999 77777754

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=99.10  E-value=5.4e-11  Score=116.58  Aligned_cols=97  Identities=11%  Similarity=0.111  Sum_probs=81.0

Q ss_pred             CCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceE--E--eCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          404 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGF--F--DTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       404 ~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i--~--~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      ||++.++|+.|+++|+++ |+||.+.......+..+   +...+|..+  .  +....+||+|++|..++++++..++++
T Consensus       140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~---~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~  215 (242)
T TIGR01459       140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRY---GAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNR  215 (242)
T ss_pred             HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEe---cccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCccc
Confidence            689999999999899997 88999988776666666   666666654  2  334578999999999999999752579


Q ss_pred             EEEEecCH-hhHHHHHHcCCcEEEEe
Q 009774          480 ILFVTDVY-QEATAAKAAGLEVVISI  504 (526)
Q Consensus       480 ~l~VgDs~-~Di~~A~~aG~~~i~v~  504 (526)
                      |+||||+. +|+.+|+++|+.+++|.
T Consensus       216 ~~~vGD~~~~Di~~a~~~G~~~i~v~  241 (242)
T TIGR01459       216 MLMVGDSFYTDILGANRLGIDTALVL  241 (242)
T ss_pred             EEEECCCcHHHHHHHHHCCCeEEEEe
Confidence            99999995 99999999999999985

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=99.01  E-value=6.6e-10  Score=108.91  Aligned_cols=89  Identities=10%  Similarity=0.088  Sum_probs=72.7

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchHHHHH--HHHhhcCCCCccc-ccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQR--LIFGNSNYGDLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~--~~l~~l~~~gl~~-~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      +|||+.++|++|+++|++++++||+++....  .+++++   |+.. +|+.++.+....   .+.+..+++++++. |++
T Consensus        25 ~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~---gl~~~~~~~Ii~s~~~~---~~~l~~~~~~~~~~-~~~   97 (242)
T TIGR01459        25 TYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSL---GINADLPEMIISSGEIA---VQMILESKKRFDIR-NGI   97 (242)
T ss_pred             cCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHC---CCCccccceEEccHHHH---HHHHHhhhhhccCC-Cce
Confidence            7899999999999999999999999887665  678888   9987 899988332111   14677788889997 999


Q ss_pred             EEEEecCHhhHHHHHHcCC
Q 009774          480 ILFVTDVYQEATAAKAAGL  498 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~aG~  498 (526)
                      |++|||+..|+......|.
T Consensus        98 ~~~vGd~~~d~~~~~~~~~  116 (242)
T TIGR01459        98 IYLLGHLENDIINLMQCYT  116 (242)
T ss_pred             EEEeCCcccchhhhcCCCc
Confidence            9999999988887765554

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=99.00  E-value=7.5e-09  Score=105.06  Aligned_cols=104  Identities=16%  Similarity=0.096  Sum_probs=84.5

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCC-----CCcccccceEEeC-C------------------cC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY-----GDLRKYLSGFFDT-A------------------VG  457 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~-----~gl~~~fd~i~~~-~------------------~~  457 (526)
                      .++||+.++|++|+++|++++|+||++...++.+++.+-.     .++.++||.++.. .                  +.
T Consensus       184 ~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~  263 (343)
T TIGR02244       184 LRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGS  263 (343)
T ss_pred             ccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCc
Confidence            5789999999999999999999999999999999999521     2489999988821 1                  01


Q ss_pred             CCCCH------------HHHHHHHHHcCCCCCCcEEEEecCH-hhHHHHH-HcCCcEEEEeCC
Q 009774          458 NKRET------------PSYVEITNSLGVDKPSEILFVTDVY-QEATAAK-AAGLEVVISIRP  506 (526)
Q Consensus       458 ~KP~p------------~~~~~~~~~l~~~~p~~~l~VgDs~-~Di~~A~-~aG~~~i~v~~~  506 (526)
                      .|+..            .......+.++++ +++|+||||+. .|+.+|+ .+||++++|.+.
T Consensus       264 ~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~-~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pE  325 (343)
T TIGR02244       264 LKWGEVDGLEPGKVYSGGSLKQFHELLKWR-GKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPE  325 (343)
T ss_pred             ccCCccccccCCCeEeCCCHHHHHHHHCCC-CCcEEEECCcchHHHHhhHHhcCcEEEEEchh
Confidence            12221            1234578889997 99999999999 8999998 899999999875

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=98.99  E-value=4.3e-09  Score=101.35  Aligned_cols=103  Identities=17%  Similarity=0.159  Sum_probs=79.9

Q ss_pred             cCccCCCHHHHHHHH--HHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeC------Cc----------CCC--
Q 009774          400 EGEVFDDVPEALEKW--HSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT------AV----------GNK--  459 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L--~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~------~~----------~~K--  459 (526)
                      .+++.||+.++++.+  ++.|+.+.|+|+++..+.+.+|++.   |+...|+.|+.+      .+          ..+  
T Consensus        69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~---gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C  145 (234)
T PF06888_consen   69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHH---GLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLC  145 (234)
T ss_pred             cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhC---CCccccceEEeCCceecCCceEEEeCccCCCCCcC
Confidence            457899999999999  4579999999999999999999999   999999988821      10          111  


Q ss_pred             C----CHHHHHHHHHH---cCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          460 R----ETPSYVEITNS---LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       460 P----~p~~~~~~~~~---l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      |    +-......++.   -|+. -++++||||+.+|+-++.+.+-.=+...|.
T Consensus       146 ~~NmCK~~il~~~~~~~~~~g~~-~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~  198 (234)
T PF06888_consen  146 PPNMCKGKILERLLQEQAQRGVP-YDRVIYIGDGRNDFCPALRLRPRDVVFPRK  198 (234)
T ss_pred             CCccchHHHHHHHHHHHhhcCCC-cceEEEECCCCCCcCcccccCCCCEEecCC
Confidence            2    23445555555   3675 789999999999999999988755555543

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=98.98  E-value=1.3e-09  Score=99.48  Aligned_cols=93  Identities=19%  Similarity=0.215  Sum_probs=67.3

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCch---H-----------HHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHH
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGS---R-----------LAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYV  466 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~---~-----------~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~  466 (526)
                      +.|+|.+.|++|++.||+++|+||..   .           ..+..+++.+   ++.  +..++  .....+||.+.+++
T Consensus        30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l---~ip--~~~~~a~~~d~~RKP~~GM~~  104 (159)
T PF08645_consen   30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKEL---GIP--IQVYAAPHKDPCRKPNPGMWE  104 (159)
T ss_dssp             C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHC---TS---EEEEECGCSSTTSTTSSHHHH
T ss_pred             cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHc---CCc--eEEEecCCCCCCCCCchhHHH
Confidence            44689999999999999999999982   1           2344556666   554  22222  23467899999999


Q ss_pred             HHHHHcCC----CCCCcEEEEecC-----------HhhHHHHHHcCCcEE
Q 009774          467 EITNSLGV----DKPSEILFVTDV-----------YQEATAAKAAGLEVV  501 (526)
Q Consensus       467 ~~~~~l~~----~~p~~~l~VgDs-----------~~Di~~A~~aG~~~i  501 (526)
                      .+++.++.    + .++++||||+           -.|.+-|.++|++..
T Consensus       105 ~~~~~~~~~~~id-~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~  153 (159)
T PF08645_consen  105 FALKDYNDGVEID-LANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY  153 (159)
T ss_dssp             HHCCCTSTT--S--CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred             HHHHhcccccccc-ccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence            99999975    7 8999999996           579999999999854

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=98.97  E-value=2.5e-09  Score=104.40  Aligned_cols=50  Identities=24%  Similarity=0.325  Sum_probs=46.0

Q ss_pred             cCCCCCHHHHHHHHHHcCCCCCCcE-EEEecCH-hhHHHHHHcCCcEEEEeCC
Q 009774          456 VGNKRETPSYVEITNSLGVDKPSEI-LFVTDVY-QEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       456 ~~~KP~p~~~~~~~~~l~~~~p~~~-l~VgDs~-~Di~~A~~aG~~~i~v~~~  506 (526)
                      ...||+|.+|..++++++++ ++++ +||||+. +||.+|+++|+++++|.+|
T Consensus       185 ~~~KP~~~~~~~~~~~~~~~-~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G  236 (236)
T TIGR01460       185 VVGKPSPAIYRAALNLLQAR-PERRDVMVGDNLRTDILGAKNAGFDTLLVLTG  236 (236)
T ss_pred             eecCCCHHHHHHHHHHhCCC-CccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence            36799999999999999997 8887 9999998 8999999999999999874

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=98.94  E-value=4.3e-09  Score=95.92  Aligned_cols=90  Identities=16%  Similarity=0.134  Sum_probs=64.1

Q ss_pred             CCHHHHHHHHHHCCC--eEEEEeCch-------HHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcC--
Q 009774          405 DDVPEALEKWHSLGT--KVYIYSSGS-------RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLG--  473 (526)
Q Consensus       405 pgv~~~L~~L~~~G~--~l~vvTn~~-------~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~--  473 (526)
                      |.+.+.++++++.+.  ++.|+||+.       ...++.+-+.+   |+.    .+.  ....||  ..+..+++.++  
T Consensus        62 ~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~l---gIp----vl~--h~~kKP--~~~~~i~~~~~~~  130 (168)
T PF09419_consen   62 PEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKAL---GIP----VLR--HRAKKP--GCFREILKYFKCQ  130 (168)
T ss_pred             HHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhh---CCc----EEE--eCCCCC--ccHHHHHHHHhhc
Confidence            444455666666654  599999983       55666666777   542    111  124577  55666666664  


Q ss_pred             ---CCCCCcEEEEecCH-hhHHHHHHcCCcEEEEeCC
Q 009774          474 ---VDKPSEILFVTDVY-QEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       474 ---~~~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~  506 (526)
                         .. |+++++|||.. .||.+|...|+.+||+..|
T Consensus       131 ~~~~~-p~eiavIGDrl~TDVl~gN~~G~~tilv~~g  166 (168)
T PF09419_consen  131 KVVTS-PSEIAVIGDRLFTDVLMGNRMGSYTILVTDG  166 (168)
T ss_pred             cCCCC-chhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence               34 99999999999 8999999999999999876

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>PRK11590 hypothetical protein; Provisional

Probab=98.89  E-value=1.1e-07  Score=91.15  Aligned_cols=95  Identities=11%  Similarity=0.038  Sum_probs=68.2

Q ss_pred             CccCCCHHHHH-HHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE----eCCcC-------CCCCHHHHHHH
Q 009774          401 GEVFDDVPEAL-EKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF----DTAVG-------NKRETPSYVEI  468 (526)
Q Consensus       401 ~~l~pgv~~~L-~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~----~~~~~-------~KP~p~~~~~~  468 (526)
                      ..+|||+.++| +.|+++|++++|+||++...++.+++.+   ++.. .+.++    +....       +.. .+=..++
T Consensus        94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l---~~~~-~~~~i~t~l~~~~tg~~~g~~c~g-~~K~~~l  168 (211)
T PRK11590         94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDT---PWLP-RVNLIASQMQRRYGGWVLTLRCLG-HEKVAQL  168 (211)
T ss_pred             CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHc---cccc-cCceEEEEEEEEEccEECCccCCC-hHHHHHH
Confidence            46799999999 6789899999999999999999999998   5422 23333    11111       111 1222444


Q ss_pred             HHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774          469 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       469 ~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                      -+.++.+ ...+.+-|||.+|+..-.-+|=..+
T Consensus       169 ~~~~~~~-~~~~~aY~Ds~~D~pmL~~a~~~~~  200 (211)
T PRK11590        169 ERKIGTP-LRLYSGYSDSKQDNPLLYFCQHRWR  200 (211)
T ss_pred             HHHhCCC-cceEEEecCCcccHHHHHhCCCCEE
Confidence            4555775 8889999999999999888886544

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=98.87  E-value=2.4e-08  Score=98.22  Aligned_cols=83  Identities=11%  Similarity=0.105  Sum_probs=62.4

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHH---HHHHHHhhcCCCCcccc-cceEE-eCCcCCCCCHHHHHHHHHHcCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIFGNSNYGDLRKY-LSGFF-DTAVGNKRETPSYVEITNSLGVD  475 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~---~~~~~l~~l~~~gl~~~-fd~i~-~~~~~~KP~p~~~~~~~~~l~~~  475 (526)
                      ..++||+.++|+.|+++|++++++||.+..   .....++.+   |+..+ ++.++ ..  ..++++..+..+.+..++ 
T Consensus       117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~---Gi~~~~~d~lllr~--~~~~K~~rr~~I~~~y~I-  190 (266)
T TIGR01533       117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRF---GFPQADEEHLLLKK--DKSSKESRRQKVQKDYEI-  190 (266)
T ss_pred             CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHc---CcCCCCcceEEeCC--CCCCcHHHHHHHHhcCCE-
Confidence            468999999999999999999999998744   344667777   88654 45555 22  235566777777775554 


Q ss_pred             CCCcEEEEecCHhhHHHH
Q 009774          476 KPSEILFVTDVYQEATAA  493 (526)
Q Consensus       476 ~p~~~l~VgDs~~Di~~A  493 (526)
                          +++|||+..|+...
T Consensus       191 ----vl~vGD~~~Df~~~  204 (266)
T TIGR01533       191 ----VLLFGDNLLDFDDF  204 (266)
T ss_pred             ----EEEECCCHHHhhhh
Confidence                79999999999653

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=98.85  E-value=1.9e-09  Score=98.72  Aligned_cols=68  Identities=25%  Similarity=0.313  Sum_probs=55.0

Q ss_pred             cCCCCCHHHHHHHHHHcCCCCCCcEEEEecCH-hhHHHHHHcCCcEEEEeCCCCCC----CCCCCCCeEecCCC
Q 009774          456 VGNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRPGNGP----LPENHGFKTINSFA  524 (526)
Q Consensus       456 ~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~~----~~~~~~~~~i~~l~  524 (526)
                      ..+||.|..|..+++.+|++ |++|+||||.. .|+-+|.++||+.|.|..|.-.+    .....++.+.++|.
T Consensus       178 vvGKP~~~fFe~al~~~gv~-p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~  250 (262)
T KOG3040|consen  178 VVGKPSPFFFESALQALGVD-PEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFA  250 (262)
T ss_pred             EecCCCHHHHHHHHHhcCCC-hHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHH
Confidence            45799999999999999998 99999999999 79999999999999999873322    12222366666654

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=98.78  E-value=1.1e-08  Score=101.81  Aligned_cols=113  Identities=12%  Similarity=0.063  Sum_probs=71.9

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCch-----HHHHHHHHhhcCCCCcccc--cceEEeCCcCCCCCHHHHHHHHHHcCCC
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGS-----RLAQRLIFGNSNYGDLRKY--LSGFFDTAVGNKRETPSYVEITNSLGVD  475 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~-----~~~~~~~l~~l~~~gl~~~--fd~i~~~~~~~KP~p~~~~~~~~~l~~~  475 (526)
                      .++++.++++.++..+..+.++++.+     ....+.+.+.+   ++...  ....++.....-.++..++.+++.+|++
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~  214 (272)
T PRK10530        138 TFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHEL---GLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWS  214 (272)
T ss_pred             ceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhc---CceEEEecCceEEEecCCCChHHHHHHHHHHcCCC
Confidence            46778888888887777777777754     22333344444   43311  1112232233333567899999999997


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecC
Q 009774          476 KPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS  522 (526)
Q Consensus       476 ~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~  522 (526)
                       +++|++|||+.+|+..++.+|+..   ..+...+.....+++++.+
T Consensus       215 -~~e~i~~GD~~NDi~m~~~ag~~v---amgna~~~lk~~Ad~v~~~  257 (272)
T PRK10530        215 -MKNVVAFGDNFNDISMLEAAGLGV---AMGNADDAVKARADLVIGD  257 (272)
T ss_pred             -HHHeEEeCCChhhHHHHHhcCceE---EecCchHHHHHhCCEEEec
Confidence             999999999999999999999733   3332222333334666654

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=98.76  E-value=2e-07  Score=87.41  Aligned_cols=85  Identities=14%  Similarity=0.151  Sum_probs=61.0

Q ss_pred             CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc--ceEEeCCc--------CCC---CCHHHHHHH---
Q 009774          405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--SGFFDTAV--------GNK---RETPSYVEI---  468 (526)
Q Consensus       405 pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f--d~i~~~~~--------~~K---P~p~~~~~~---  468 (526)
                      |++.++|+.++++|++++|+|.++...++.+++.+   ++...+  ..-+....        ..+   -+...+..+   
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~---~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~  168 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERL---GIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIR  168 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHT---TSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc---CCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHH
Confidence            44449999999999999999999999999999988   666422  11111000        000   134556666   


Q ss_pred             HHHcCCCCCCcEEEEecCHhhHHHHH
Q 009774          469 TNSLGVDKPSEILFVTDVYQEATAAK  494 (526)
Q Consensus       469 ~~~l~~~~p~~~l~VgDs~~Di~~A~  494 (526)
                      ... +.. +..+++||||.+|+.+++
T Consensus       169 ~~~-~~~-~~~~~~iGDs~~D~~~lr  192 (192)
T PF12710_consen  169 DEE-DID-PDRVIAIGDSINDLPMLR  192 (192)
T ss_dssp             HHH-THT-CCEEEEEESSGGGHHHHH
T ss_pred             hhc-CCC-CCeEEEEECCHHHHHHhC
Confidence            444 786 899999999999998865

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=98.74  E-value=8.4e-09  Score=90.69  Aligned_cols=83  Identities=18%  Similarity=0.309  Sum_probs=73.2

Q ss_pred             HHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHh
Q 009774          409 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQ  488 (526)
Q Consensus       409 ~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~  488 (526)
                      --++.|.+.|++++|+|......++...+.+   |+...|..+       +-+...|..+++++++. +++|.||||...
T Consensus        42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~L---GI~~~~qG~-------~dK~~a~~~L~~~~~l~-~e~~ayiGDD~~  110 (170)
T COG1778          42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDL---GIKHLYQGI-------SDKLAAFEELLKKLNLD-PEEVAYVGDDLV  110 (170)
T ss_pred             HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHc---CCceeeech-------HhHHHHHHHHHHHhCCC-HHHhhhhcCccc
Confidence            4677888899999999999999999999999   887655444       55678899999999998 999999999999


Q ss_pred             hHHHHHHcCCcEEE
Q 009774          489 EATAAKAAGLEVVI  502 (526)
Q Consensus       489 Di~~A~~aG~~~i~  502 (526)
                      |+..-.++|+.+.-
T Consensus       111 Dlpvm~~vGls~a~  124 (170)
T COG1778         111 DLPVMEKVGLSVAV  124 (170)
T ss_pred             cHHHHHHcCCcccc
Confidence            99999999997653

>TIGR01684 viral_ppase viral phosphatase

Probab=98.68  E-value=4.8e-08  Score=95.96  Aligned_cols=56  Identities=13%  Similarity=0.172  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHH
Q 009774          405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETP  463 (526)
Q Consensus       405 pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~  463 (526)
                      ||+.++|++|+++|++++|+||++++.+...++.+   |+..+|+.++  ++....||+|+
T Consensus       149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~l---GLd~YFdvIIs~Gdv~~~kp~~e  206 (301)
T TIGR01684       149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKV---KLDRYFDIIISGGHKAEEYSTMS  206 (301)
T ss_pred             HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHc---CCCcccCEEEECCccccCCCCcc
Confidence            89999999999999999999999999999999999   9999999888  34566677664

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=98.67  E-value=2.7e-06  Score=81.44  Aligned_cols=96  Identities=10%  Similarity=0.076  Sum_probs=66.5

Q ss_pred             CccCCCHHHHHH-HHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE----eCCcCCC---C---CHHHHHHHH
Q 009774          401 GEVFDDVPEALE-KWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF----DTAVGNK---R---ETPSYVEIT  469 (526)
Q Consensus       401 ~~l~pgv~~~L~-~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~----~~~~~~K---P---~p~~~~~~~  469 (526)
                      ..+||++.++|+ .++++|++++|+||++...++.+.+..   ++..- +.++    +...+++   |   -++=..++-
T Consensus        93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~---~~~~~-~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~  168 (210)
T TIGR01545        93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS---NFIHR-LNLIASQIERGNGGWVLPLRCLGHEKVAQLE  168 (210)
T ss_pred             CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc---ccccc-CcEEEEEeEEeCCceEcCccCCChHHHHHHH
Confidence            368999999996 889899999999999999999999886   33221 2222    1101111   1   112223344


Q ss_pred             HHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774          470 NSLGVDKPSEILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       470 ~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                      +.++.+ .+.+.+-|||.+|+..-.-+|-..+
T Consensus       169 ~~~~~~-~~~~~aYsDS~~D~pmL~~a~~~~~  199 (210)
T TIGR01545       169 QKIGSP-LKLYSGYSDSKQDNPLLAFCEHRWR  199 (210)
T ss_pred             HHhCCC-hhheEEecCCcccHHHHHhCCCcEE
Confidence            555655 7789999999999999888887554

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=98.63  E-value=1.1e-06  Score=80.21  Aligned_cols=88  Identities=20%  Similarity=0.261  Sum_probs=68.0

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccc--ccceEE-----------eC-----CcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK--YLSGFF-----------DT-----AVGNKRE  461 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~--~fd~i~-----------~~-----~~~~KP~  461 (526)
                      ...+-||++++...|+++|.+++++|++-+..+..+-+.|   |+..  .|...+           +.     ..++|  
T Consensus        86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~L---gi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggK--  160 (227)
T KOG1615|consen   86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQL---GIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGK--  160 (227)
T ss_pred             CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHh---CCcHhhhhhheeeeccCCcccccccCCccccCCcc--
Confidence            4578999999999999999999999999999999999988   7764  222211           11     12344  


Q ss_pred             HHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHH
Q 009774          462 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKA  495 (526)
Q Consensus       462 p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~  495 (526)
                      ++.+..+.+  +.. -+.++||||..+|+++..-
T Consensus       161 a~~i~~lrk--~~~-~~~~~mvGDGatDlea~~p  191 (227)
T KOG1615|consen  161 AEVIALLRK--NYN-YKTIVMVGDGATDLEAMPP  191 (227)
T ss_pred             HHHHHHHHh--CCC-hheeEEecCCccccccCCc
Confidence            466777776  775 7799999999999987655

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=98.60  E-value=2.3e-08  Score=91.63  Aligned_cols=96  Identities=14%  Similarity=0.106  Sum_probs=82.7

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccc-ccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~-~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      +...||+.++|+.|.+. |.++|.|++++.+++.+++.+   +... +|+.++  +++...+|.   |.+.++.+|.+ +
T Consensus        41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~l---dp~~~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~-~  112 (162)
T TIGR02251        41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDIL---DRGGKVISRRLYRESCVFTNGK---YVKDLSLVGKD-L  112 (162)
T ss_pred             EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHH---CcCCCEEeEEEEccccEEeCCC---EEeEchhcCCC-h
Confidence            35789999999999987 999999999999999999999   7664 788777  444445655   78889999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEe
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISI  504 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~  504 (526)
                      ++|++|||++.++..+.++|+......
T Consensus       113 ~~vIiVDD~~~~~~~~~~NgI~i~~f~  139 (162)
T TIGR02251       113 SKVIIIDNSPYSYSLQPDNAIPIKSWF  139 (162)
T ss_pred             hhEEEEeCChhhhccCccCEeecCCCC
Confidence            999999999999999999999876554

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=98.58  E-value=8.5e-08  Score=104.69  Aligned_cols=110  Identities=17%  Similarity=0.182  Sum_probs=84.9

Q ss_pred             cCccCCCHHHHHHHHHHCCC-eEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGT-KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~-~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      ...++||+.++|++|+++|+ +++++||.+....+..++++   |+.++|..+       .|++.  ..++++++.+ ++
T Consensus       360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~l---gi~~~f~~~-------~p~~K--~~~i~~l~~~-~~  426 (536)
T TIGR01512       360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVAREL---GIDEVHAEL-------LPEDK--LEIVKELREK-YG  426 (536)
T ss_pred             eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHc---CChhhhhcc-------CcHHH--HHHHHHHHhc-CC
Confidence            34789999999999999999 99999999999999999999   898776544       23222  4577777776 88


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEEEEeCC-CCCCCCCCCCCeEe--cCCCC
Q 009774          479 EILFVTDVYQEATAAKAAGLEVVISIRP-GNGPLPENHGFKTI--NSFAE  525 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i~v~~~-~~~~~~~~~~~~~i--~~l~e  525 (526)
                      +++||||+.+|+.+++++|+   .+.++ ...+.....+|.++  +++.+
T Consensus       427 ~v~~vGDg~nD~~al~~A~v---gia~g~~~~~~~~~~ad~vl~~~~l~~  473 (536)
T TIGR01512       427 PVAMVGDGINDAPALAAADV---GIAMGASGSDVAIETADVVLLNDDLSR  473 (536)
T ss_pred             EEEEEeCCHHHHHHHHhCCE---EEEeCCCccHHHHHhCCEEEECCCHHH
Confidence            99999999999999999995   55555 22222223347777  56554

.

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=98.55  E-value=1.6e-07  Score=103.07  Aligned_cols=106  Identities=14%  Similarity=0.141  Sum_probs=80.3

Q ss_pred             cCccCCCHHHHHHHHHHCC-CeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLG-TKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G-~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      +..++||+.++|++|+++| ++++++||.+....+.+++++   |+.++|..+.     .++++    .++++++.. ++
T Consensus       382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~l---gi~~~f~~~~-----p~~K~----~~v~~l~~~-~~  448 (556)
T TIGR01525       382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAEL---GIDEVHAELL-----PEDKL----AIVKELQEE-GG  448 (556)
T ss_pred             cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHh---CCCeeeccCC-----HHHHH----HHHHHHHHc-CC
Confidence            3479999999999999999 999999999999999999999   8877665431     11222    355555556 88


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEec
Q 009774          479 EILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTIN  521 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~  521 (526)
                      +|+||||+.+|+.+++++|   +.+.++...+.....+|.++.
T Consensus       449 ~v~~vGDg~nD~~al~~A~---vgia~g~~~~~~~~~Ad~vi~  488 (556)
T TIGR01525       449 VVAMVGDGINDAPALAAAD---VGIAMGAGSDVAIEAADIVLL  488 (556)
T ss_pred             EEEEEECChhHHHHHhhCC---EeEEeCCCCHHHHHhCCEEEe
Confidence            9999999999999999999   566655222111223466665

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>COG4996 Predicted phosphatase [General function prediction only]

Probab=98.49  E-value=3.3e-07  Score=77.96  Aligned_cols=79  Identities=19%  Similarity=0.204  Sum_probs=64.7

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHH---HHHHc-----
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVE---ITNSL-----  472 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~---~~~~l-----  472 (526)
                      +.|||.+.++|+.+|..|+-++.+|=+....+-..++.+   ++.+||+.++     .+|+|.-++.   ++..+     
T Consensus        40 v~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral---~~~~yFhy~V-----iePhP~K~~ML~~llr~i~~er~  111 (164)
T COG4996          40 VHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRAL---DLLQYFHYIV-----IEPHPYKFLMLSQLLREINTERN  111 (164)
T ss_pred             EEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHh---chhhhEEEEE-----ecCCChhHHHHHHHHHHHHHhhc
Confidence            479999999999999999999999998888888899999   9999999987     3555544443   33333     


Q ss_pred             -CCCCCCcEEEEecCHh
Q 009774          473 -GVDKPSEILFVTDVYQ  488 (526)
Q Consensus       473 -~~~~p~~~l~VgDs~~  488 (526)
                       .++ |++++|++|+.-
T Consensus       112 ~~ik-P~~Ivy~DDR~i  127 (164)
T COG4996         112 QKIK-PSEIVYLDDRRI  127 (164)
T ss_pred             cccC-cceEEEEecccc
Confidence             466 999999999873

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=98.47  E-value=1.3e-06  Score=81.22  Aligned_cols=103  Identities=14%  Similarity=0.091  Sum_probs=74.9

Q ss_pred             cCccCCCHHHHHHHHHHCCC-eEEEEeCchHHHHHHHHhhcCCCCcccccceEEe------CCc------C-----CCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGT-KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD------TAV------G-----NKRE  461 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~-~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~------~~~------~-----~KP~  461 (526)
                      .++..||+.++++.+++.|. .+.|||.++...++.+++++   ++.++|+.|+.      ..+      +     ++--
T Consensus        82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~---~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~C  158 (256)
T KOG3120|consen   82 SIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAA---GIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLC  158 (256)
T ss_pred             cCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHc---cHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcC
Confidence            45788999999999999986 99999999999999999999   99999999882      111      0     0101


Q ss_pred             H-H-----HHHHH-H--HHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          462 T-P-----SYVEI-T--NSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       462 p-~-----~~~~~-~--~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      | .     ...++ +  -+-|+. -++.+||||+.+|+-+-...-..-+...|.
T Consensus       159 PsNmCKg~Vl~~~~~s~~~~gv~-yer~iYvGDG~nD~CP~l~Lr~~D~ampRk  211 (256)
T KOG3120|consen  159 PSNMCKGLVLDELVASQLKDGVR-YERLIYVGDGANDFCPVLRLRACDVAMPRK  211 (256)
T ss_pred             chhhhhhHHHHHHHHHHhhcCCc-eeeEEEEcCCCCCcCcchhcccCceecccC
Confidence            1 1     11111 1  223665 789999999999998877765544444443

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.44  E-value=7.5e-07  Score=87.70  Aligned_cols=80  Identities=16%  Similarity=0.167  Sum_probs=63.2

Q ss_pred             CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEe-CCcCC-------------------------
Q 009774          405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD-TAVGN-------------------------  458 (526)
Q Consensus       405 pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~-~~~~~-------------------------  458 (526)
                      |++.++|++|+++|++++|+||++++.+...++.+   |+..+|+.+++ .....                         
T Consensus       151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~l---gL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~  227 (303)
T PHA03398        151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKET---KLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDV  227 (303)
T ss_pred             hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHc---CCCccccEEEECCCcccccccceeecccceeEEecCceeEeC
Confidence            88999999999999999999999999999999999   99999997772 11111                         


Q ss_pred             ------CCCHHHHHHHHHHcCCCCCCcEEEEecCH
Q 009774          459 ------KRETPSYVEITNSLGVDKPSEILFVTDVY  487 (526)
Q Consensus       459 ------KP~p~~~~~~~~~l~~~~p~~~l~VgDs~  487 (526)
                            ...|.+.+..+++.|+.--..+-.|+|-.
T Consensus       228 ~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~  262 (303)
T PHA03398        228 TDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK  262 (303)
T ss_pred             CcccCCCCCCeehHHHHHHcCcceeccEEEeccCc
Confidence                  23577788888888875235666777765

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=98.41  E-value=1.4e-06  Score=84.49  Aligned_cols=79  Identities=16%  Similarity=0.216  Sum_probs=55.2

Q ss_pred             eEEEEeCchHHHHHHHHhhcCCCCcc--cccce-EEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHc
Q 009774          420 KVYIYSSGSRLAQRLIFGNSNYGDLR--KYLSG-FFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAA  496 (526)
Q Consensus       420 ~l~vvTn~~~~~~~~~l~~l~~~gl~--~~fd~-i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~a  496 (526)
                      .+.+.++.+.+.....++.+   +..  -.... .++-......++..+..+++.+|++ ++++++|||+.+|+...+.+
T Consensus       117 ~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~a  192 (230)
T PRK01158        117 EVALRRTVPVEEVRELLEEL---GLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGID-PEEVAAIGDSENDLEMFEVA  192 (230)
T ss_pred             eeeecccccHHHHHHHHHHc---CCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhc
Confidence            34555666666666666665   321  00011 1133344556688999999999997 99999999999999999999


Q ss_pred             CCcEEE
Q 009774          497 GLEVVI  502 (526)
Q Consensus       497 G~~~i~  502 (526)
                      |+..+.
T Consensus       193 g~~vam  198 (230)
T PRK01158        193 GFGVAV  198 (230)
T ss_pred             CceEEe
Confidence            987554

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.38  E-value=1e-05  Score=80.76  Aligned_cols=88  Identities=10%  Similarity=0.007  Sum_probs=59.5

Q ss_pred             HHHHHHCCCeEEEE---eCchHHHHHHHHhhcCCCCcc----cccceEEeCCcCCCCCHHHHHHHHHHcCCCCC-CcEEE
Q 009774          411 LEKWHSLGTKVYIY---SSGSRLAQRLIFGNSNYGDLR----KYLSGFFDTAVGNKRETPSYVEITNSLGVDKP-SEILF  482 (526)
Q Consensus       411 L~~L~~~G~~l~vv---Tn~~~~~~~~~l~~l~~~gl~----~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p-~~~l~  482 (526)
                      ++.++..++...++   ++.........++..   ++.    .+|..+.   ... .+.....++++.+|++ + +++++
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~ei~---~~~-~Kg~al~~l~~~~~i~-~~~~v~~  212 (273)
T PRK00192        141 ARLAKDREFSEPFLWNGSEAAKERFEEALKRL---GLKVTRGGRFLHLL---GGG-DKGKAVRWLKELYRRQ-DGVETIA  212 (273)
T ss_pred             HHHHHhcccCCceeecCchHHHHHHHHHHHHc---CCEEEECCeEEEEe---CCC-CHHHHHHHHHHHHhcc-CCceEEE
Confidence            34455556665555   444444455555554   554    2222222   233 4556899999999997 9 99999


Q ss_pred             EecCHhhHHHHHHcCCcEEEEeCC
Q 009774          483 VTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       483 VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      |||+.+|+..++.+|+.++.-+-.
T Consensus       213 ~GDs~NDi~m~~~ag~~vam~NA~  236 (273)
T PRK00192        213 LGDSPNDLPMLEAADIAVVVPGPD  236 (273)
T ss_pred             EcCChhhHHHHHhCCeeEEeCCCC
Confidence            999999999999999887765543

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=98.32  E-value=1e-06  Score=96.64  Aligned_cols=105  Identities=10%  Similarity=0.076  Sum_probs=76.6

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      ..+++||+.++|++|+++|++++++||.+....+.+++.+   |+.     ++...   +|++.  ..+++++..+ +++
T Consensus       403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~l---gi~-----~~~~~---~p~~K--~~~v~~l~~~-~~~  468 (562)
T TIGR01511       403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL---GIN-----VRAEV---LPDDK--AALIKELQEK-GRV  468 (562)
T ss_pred             cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHc---CCc-----EEccC---ChHHH--HHHHHHHHHc-CCE
Confidence            3468999999999999999999999999999999999999   884     22211   23221  3445555556 899


Q ss_pred             EEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEec
Q 009774          480 ILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTIN  521 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~  521 (526)
                      |+||||+.+|+.+++++|+   .+.++...+.....+|.++.
T Consensus       469 v~~VGDg~nD~~al~~A~v---gia~g~g~~~a~~~Advvl~  507 (562)
T TIGR01511       469 VAMVGDGINDAPALAQADV---GIAIGAGTDVAIEAADVVLM  507 (562)
T ss_pred             EEEEeCCCccHHHHhhCCE---EEEeCCcCHHHHhhCCEEEe
Confidence            9999999999999999996   34444212222223466663

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=98.28  E-value=8.5e-07  Score=83.62  Aligned_cols=102  Identities=22%  Similarity=0.291  Sum_probs=60.6

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHH-------HHHHHHh-hcCCCCcccccceEEeCCcCCCCCHHHHHHHHHH
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRL-------AQRLIFG-NSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNS  471 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~-------~~~~~l~-~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~  471 (526)
                      ..+|.||+.++|++|.+.|+.+.++|..+..       .....++ ++   +...+-+.++.   ..|-          .
T Consensus        71 ~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf---~~i~~~~~~~~---~~K~----------~  134 (191)
T PF06941_consen   71 NLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHF---PFIPYDNLIFT---GDKT----------L  134 (191)
T ss_dssp             T--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHH---THHHHCCEEEE---SSGG----------G
T ss_pred             CCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHc---CCCchheEEEe---cCCC----------e
Confidence            4579999999999999999888888877543       2223333 33   22221122222   1221          1


Q ss_pred             cCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCC
Q 009774          472 LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE  525 (526)
Q Consensus       472 l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e  525 (526)
                      ++.+     ++|+|++..+..+...|+.+|++..+.|....   ....++|..|
T Consensus       135 v~~D-----vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~---~~~Rv~~W~e  180 (191)
T PF06941_consen  135 VGGD-----VLIDDRPHNLEQFANAGIPVILFDQPYNRDES---NFPRVNNWEE  180 (191)
T ss_dssp             C--S-----EEEESSSHHHSS-SSESSEEEEE--GGGTT-----TSEEE-STTS
T ss_pred             Eecc-----EEecCChHHHHhccCCCceEEEEcCCCCCCCC---CCccCCCHHH
Confidence            2333     89999999999999999999999988665433   3677777766

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=98.27  E-value=8.8e-06  Score=78.47  Aligned_cols=79  Identities=15%  Similarity=0.106  Sum_probs=56.3

Q ss_pred             eEEEEeCchHHHHHHHHhhcCCCCccccc---ceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHc
Q 009774          420 KVYIYSSGSRLAQRLIFGNSNYGDLRKYL---SGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAA  496 (526)
Q Consensus       420 ~l~vvTn~~~~~~~~~l~~l~~~gl~~~f---d~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~a  496 (526)
                      ...+.+..+.+.....++.+   +..-.+   ...++-.....++...+.++++.+|++ ++++++|||+.+|+...+.+
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~a  184 (225)
T TIGR01482       109 LVKMRYGIDVDTVREIIKEL---GLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIK-PGETLVCGDSENDIDLFEVP  184 (225)
T ss_pred             eEEEeecCCHHHHHHHHHhc---CceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCC-HHHEEEECCCHhhHHHHHhc
Confidence            34455555566666677776   432111   112233445566778899999999997 99999999999999999999


Q ss_pred             CCcEEE
Q 009774          497 GLEVVI  502 (526)
Q Consensus       497 G~~~i~  502 (526)
                      |..+..
T Consensus       185 g~~vam  190 (225)
T TIGR01482       185 GFGVAV  190 (225)
T ss_pred             CceEEc
Confidence            996554

catalyze the same reaction as SPP.

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=98.24  E-value=1.1e-05  Score=73.09  Aligned_cols=91  Identities=16%  Similarity=0.081  Sum_probs=65.8

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE----------------eC--CcCCCCCH
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF----------------DT--AVGNKRET  462 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~----------------~~--~~~~KP~p  462 (526)
                      +.+.||.+++.+..++++++++|+|++-......+++.+-.-.-....|.+.                ++  .+..||. 
T Consensus        72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~-  150 (220)
T COG4359          72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSS-  150 (220)
T ss_pred             cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcch-
Confidence            4688999999999999999999999999999999999872100112222221                11  2333442 


Q ss_pred             HHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCC
Q 009774          463 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGL  498 (526)
Q Consensus       463 ~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~  498 (526)
                           ....+.-. ++.++|+||+.+|+.+|+..-.
T Consensus       151 -----vI~~l~e~-~e~~fy~GDsvsDlsaaklsDl  180 (220)
T COG4359         151 -----VIHELSEP-NESIFYCGDSVSDLSAAKLSDL  180 (220)
T ss_pred             -----hHHHhhcC-CceEEEecCCcccccHhhhhhh
Confidence                 34455554 8999999999999999998764

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=98.20  E-value=1.9e-06  Score=87.99  Aligned_cols=71  Identities=17%  Similarity=0.081  Sum_probs=55.8

Q ss_pred             cCCCCCHHHHHHHHHHc--------CCC----CCCcEEEEecCH-hhHHHHHHcCCcEEEEeCC-CCCCCC--CCCCCeE
Q 009774          456 VGNKRETPSYVEITNSL--------GVD----KPSEILFVTDVY-QEATAAKAAGLEVVISIRP-GNGPLP--ENHGFKT  519 (526)
Q Consensus       456 ~~~KP~p~~~~~~~~~l--------~~~----~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~-~~~~~~--~~~~~~~  519 (526)
                      ..+||+|.+|..+++.+        +++    ++++++||||++ +||.+|+++||.+++|.+| ......  ...++++
T Consensus       230 ~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~v  309 (321)
T TIGR01456       230 TLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLI  309 (321)
T ss_pred             EcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEE
Confidence            35899999999999888        432    257999999999 8999999999999999887 222221  2235899


Q ss_pred             ecCCCCC
Q 009774          520 INSFAEI  526 (526)
Q Consensus       520 i~~l~eL  526 (526)
                      ++|+.|+
T Consensus       310 v~~l~e~  316 (321)
T TIGR01456       310 VNDVFDA  316 (321)
T ss_pred             ECCHHHH
Confidence            9998764

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=98.17  E-value=3.8e-06  Score=70.58  Aligned_cols=83  Identities=11%  Similarity=0.058  Sum_probs=51.6

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchHH---HHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~---~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      ++||+.++|++|+++|+++.++||++..   .....++.+   |+.-.-+.++.+       .......+++. -. ...
T Consensus        15 ~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~---Gi~~~~~~i~ts-------~~~~~~~l~~~-~~-~~~   82 (101)
T PF13344_consen   15 PIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKL---GIPVDEDEIITS-------GMAAAEYLKEH-KG-GKK   82 (101)
T ss_dssp             E-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHT---TTT--GGGEEEH-------HHHHHHHHHHH-TT-SSE
T ss_pred             cCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhc---CcCCCcCEEECh-------HHHHHHHHHhc-CC-CCE
Confidence            7799999999999999999999999733   344456777   777555566522       12233344442 22 458


Q ss_pred             EEEEecCHhhHHHHHHcCC
Q 009774          480 ILFVTDVYQEATAAKAAGL  498 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~aG~  498 (526)
                      +++||-. ...+..+++|+
T Consensus        83 v~vlG~~-~l~~~l~~~G~  100 (101)
T PF13344_consen   83 VYVLGSD-GLREELREAGF  100 (101)
T ss_dssp             EEEES-H-HHHHHHHHTTE
T ss_pred             EEEEcCH-HHHHHHHHcCC
Confidence            8888853 45555666664

...

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=98.14  E-value=1.4e-06  Score=85.18  Aligned_cols=101  Identities=13%  Similarity=0.199  Sum_probs=73.6

Q ss_pred             CCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE-----eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          404 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-----DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       404 ~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~-----~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      |+.....+.+|++-++ +.++||.+.-.-  ......+.|-..+...+.     +....+||.+.++..++++.+++ |+
T Consensus       167 y~KL~kA~~yLqnP~c-lflatn~D~~~p--~~~~~~ipG~G~~v~av~~~t~R~P~v~GKP~~~m~~~l~~~~~i~-ps  242 (306)
T KOG2882|consen  167 YPKLMKALNYLQNPGC-LFLATNRDATTP--PTPGVEIPGAGSFVAAVKFATGRQPIVLGKPSTFMFEYLLEKFNID-PS  242 (306)
T ss_pred             HHHHHHHHHHhCCCCc-EEEeccCccccC--CCCCeeccCCccHHHHHHHHhcCCCeecCCCCHHHHHHHHHHcCCC-cc
Confidence            4566778888888777 778899765321  111111112223233332     12346799999999999999998 99


Q ss_pred             cEEEEecCH-hhHHHHHHcCCcEEEEeCCCC
Q 009774          479 EILFVTDVY-QEATAAKAAGLEVVISIRPGN  508 (526)
Q Consensus       479 ~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~  508 (526)
                      +|+||||+. +||.-+++.|++++++-.|.+
T Consensus       243 Rt~mvGDRL~TDIlFG~~~G~~TLLvltGv~  273 (306)
T KOG2882|consen  243 RTCMVGDRLDTDILFGKNCGFKTLLVLSGVT  273 (306)
T ss_pred             eEEEEcccchhhhhHhhccCcceEEEecCcC
Confidence            999999999 899999999999999998844

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.12  E-value=3.7e-06  Score=96.72  Aligned_cols=86  Identities=16%  Similarity=0.255  Sum_probs=73.9

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      ..+++||+.++|++|+++|++++++|+.+....+.+.+.+   |+.++|..+.         |+.-..++++++.+ +++
T Consensus       648 ~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~l---gi~~~~~~~~---------p~~K~~~i~~l~~~-~~~  714 (834)
T PRK10671        648 RDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEA---GIDEVIAGVL---------PDGKAEAIKRLQSQ-GRQ  714 (834)
T ss_pred             cCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---CCCEEEeCCC---------HHHHHHHHHHHhhc-CCE
Confidence            3478999999999999999999999999999999999999   8876554332         23345688888887 999


Q ss_pred             EEEEecCHhhHHHHHHcCC
Q 009774          480 ILFVTDVYQEATAAKAAGL  498 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~aG~  498 (526)
                      ++||||+.+|+.+++++|+
T Consensus       715 v~~vGDg~nD~~al~~Agv  733 (834)
T PRK10671        715 VAMVGDGINDAPALAQADV  733 (834)
T ss_pred             EEEEeCCHHHHHHHHhCCe
Confidence            9999999999999999999

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=98.05  E-value=2.4e-05  Score=75.05  Aligned_cols=80  Identities=18%  Similarity=0.218  Sum_probs=57.5

Q ss_pred             eEEEEeCchHHHHHHHHhhcCCCCcccccceEE-eCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCC
Q 009774          420 KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGL  498 (526)
Q Consensus       420 ~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~  498 (526)
                      .+.++++.........++..   ++..++.... +-......+...++.+++.+|++ ++++++|||+.+|+...+.+|+
T Consensus       109 ~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~-~~~~i~iGDs~ND~~ml~~ag~  184 (215)
T TIGR01487       109 LVIMREGKDVDEVREIIKER---GLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIK-PEEVAAIGDSENDIDLFRVVGF  184 (215)
T ss_pred             EEEecCCccHHHHHHHHHhC---CeEEEecCceEEEecCCCChHHHHHHHHHHhCCC-HHHEEEECCCHHHHHHHHhCCC
Confidence            44556666666667677766   5554333212 32333344556899999999997 9999999999999999999998


Q ss_pred             cEEEE
Q 009774          499 EVVIS  503 (526)
Q Consensus       499 ~~i~v  503 (526)
                      ....-
T Consensus       185 ~vam~  189 (215)
T TIGR01487       185 KVAVA  189 (215)
T ss_pred             eEEcC
Confidence            76654

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=97.94  E-value=7.9e-06  Score=79.19  Aligned_cols=97  Identities=11%  Similarity=0.025  Sum_probs=59.2

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHH---HHHHHhhcCCCCcccccceEE-e-CCcCC---CCCHHHHHHHHHHcC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLA---QRLIFGNSNYGDLRKYLSGFF-D-TAVGN---KRETPSYVEITNSLG  473 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~---~~~~l~~l~~~gl~~~fd~i~-~-~~~~~---KP~p~~~~~~~~~l~  473 (526)
                      ++.||+.++++.++++|++|+++||-+...   ...-|+..   |+..+-..++ . .....   +..-..-+..+++-|
T Consensus       115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~---G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~G  191 (229)
T PF03767_consen  115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKA---GFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKG  191 (229)
T ss_dssp             EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHH---TTSTBSCGEEEEESSTSS------SHHHHHHHHHTT
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHc---CCCccchhccccccccccccccccchHHHHHHHHcC
Confidence            588999999999999999999999987653   33345555   7654322333 1 11111   111122233333435


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHc---CCcEEEEe
Q 009774          474 VDKPSEILFVTDVYQEATAAKAA---GLEVVISI  504 (526)
Q Consensus       474 ~~~p~~~l~VgDs~~Di~~A~~a---G~~~i~v~  504 (526)
                      ..   =+++|||..+|+.+++..   |-+.+.+.
T Consensus       192 y~---Ii~~iGD~~~D~~~~~~~~~~~~r~f~lP  222 (229)
T PF03767_consen  192 YR---IIANIGDQLSDFSGAKTAGARAERWFKLP  222 (229)
T ss_dssp             EE---EEEEEESSGGGCHCTHHHHHHHTTEEE-T
T ss_pred             Cc---EEEEeCCCHHHhhcccccccccceEEEcC
Confidence            54   478899999999995544   34455443

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>TIGR01675 plant-AP plant acid phosphatase

Probab=97.89  E-value=5.3e-05  Score=72.77  Aligned_cols=95  Identities=12%  Similarity=0.070  Sum_probs=60.8

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHH---HHHHHhhcCCCCcccccceEE--eCCcCCCCC----HHHHHHHHHH
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLA---QRLIFGNSNYGDLRKYLSGFF--DTAVGNKRE----TPSYVEITNS  471 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~---~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~----p~~~~~~~~~  471 (526)
                      .++.|++.++++.|+++|++++++|+-+...   ...-|...   |+..+ +.++  ......|+.    .+.+.++. +
T Consensus       119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~---G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~-~  193 (229)
T TIGR01675       119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINA---GFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLM-E  193 (229)
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHc---CCCCc-CeeeecCCCCCCchHhHHHHHHHHHHH-h
Confidence            3688999999999999999999999998766   44455556   76654 5554  212223322    12222222 2


Q ss_pred             cCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEe
Q 009774          472 LGVDKPSEILFVTDVYQEATAAKAAGLEVVISI  504 (526)
Q Consensus       472 l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~  504 (526)
                      -|-.   =+..|||..+|+.+. -+|.++.-+.
T Consensus       194 ~GYr---Iv~~iGDq~sDl~G~-~~~~RtFKLP  222 (229)
T TIGR01675       194 EGYR---IWGNIGDQWSDLLGS-PPGRRTFKLP  222 (229)
T ss_pred             CCce---EEEEECCChHHhcCC-CccCceeeCC
Confidence            2332   456789999999664 4555665443

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=97.86  E-value=2.4e-05  Score=90.43  Aligned_cols=116  Identities=16%  Similarity=0.117  Sum_probs=89.4

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEe--C----------------CcCCCCCHH
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD--T----------------AVGNKRETP  463 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~--~----------------~~~~KP~p~  463 (526)
                      +++||+.++++.|++.|+++.++|+.+......+.+.+   |+...++.+++  +                ....++.|+
T Consensus       528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~---Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~  604 (884)
T TIGR01522       528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRL---GMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPE  604 (884)
T ss_pred             cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHH
Confidence            68999999999999999999999999999999999999   88876655431  0                123456777


Q ss_pred             HHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCC-CCCCCCCCeEe--cCCC
Q 009774          464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLPENHGFKTI--NSFA  524 (526)
Q Consensus       464 ~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~-~~~~~~~~~~i--~~l~  524 (526)
                      --..+.+.+.-. .+.+.||||+.+|+.+.++|++   ++..+.+. +.....+|.++  ++|.
T Consensus       605 ~K~~iv~~lq~~-g~~v~mvGDGvND~pAl~~AdV---Gia~g~~g~~va~~aaDivl~dd~~~  664 (884)
T TIGR01522       605 HKMKIVKALQKR-GDVVAMTGDGVNDAPALKLADI---GVAMGQTGTDVAKEAADMILTDDDFA  664 (884)
T ss_pred             HHHHHHHHHHHC-CCEEEEECCCcccHHHHHhCCe---eEecCCCcCHHHHHhcCEEEcCCCHH
Confidence            778888888886 8899999999999999999995   55554221 12223447777  4454

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=97.83  E-value=0.00011  Score=71.95  Aligned_cols=102  Identities=13%  Similarity=0.160  Sum_probs=63.8

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHH----HHHHHcCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYV----EITNSLGV  474 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~----~~~~~l~~  474 (526)
                      .++.|++.++++.|+++|+++.++||-+.......++.|...|+..+ +.++  +.....+.+--.|.    .-+.+-|-
T Consensus       144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~eGY  222 (275)
T TIGR01680       144 APALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQEGY  222 (275)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHcCc
Confidence            46889999999999999999999999987654444444433377654 4444  22112222222222    12223334


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          475 DKPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       475 ~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      .   =+..|||..+|+.+....+.++.-+.++
T Consensus       223 r---Iv~~iGDq~sDl~G~~~g~~RtFKLPNP  251 (275)
T TIGR01680       223 N---IVGIIGDQWNDLKGEHRGAIRSFKLPNP  251 (275)
T ss_pred             e---EEEEECCCHHhccCCCccCcceecCCCc
Confidence            3   5677899999997666333577766654

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>KOG3699 consensus Cytoskeletal protein Adducin [Signal transduction mechanisms; Cytoskeleton]

Probab=97.82  E-value=1.6e-05  Score=83.91  Aligned_cols=175  Identities=18%  Similarity=0.208  Sum_probs=115.5

Q ss_pred             HcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCC-CCCCCCCCCchHHHHH
Q 009774           43 TLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPY-PHKPPKCSDCAPLFMK  121 (526)
Q Consensus        43 ~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~-~~~p~~~S~E~~lH~~  121 (526)
                      ..+|..++.+++.||+.+-   -.-.-++++|.+..+.+.+..+..++|.+|....+.-..-- ..+    +.-...|.+
T Consensus       363 ~~~~ne~s~~~~pVrIedP---~qfvp~~~NP~Evle~rnkIreqnr~D~ksAGPQSqlL~~V~~e~----s~~~~~~Sa  435 (598)
T KOG3699|consen  363 KEDWNEGSASHTPVRIEDP---NQFVPLLINPKEVLEMRNKIREQNRQDVKSAGPQSQLLASVTAEK----SRSLSTHSA  435 (598)
T ss_pred             eccccccccCCceeeccCC---CCccccccCHHHHHHHHhhHHHhhhccccccCCCcceecceeccc----ccccchhhh
Confidence            3478899999999998751   11235999999999999999999999998764433100000 000    111347999


Q ss_pred             HHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCC-cccCccceeeecCCCCchHHHHHHHHHHhhCCC
Q 009774          122 AYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGH-GYYDELVVPIIENTAYENELTDSLAKAIDAYPK  199 (526)
Q Consensus       122 iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~vpv~~~~~~~~~la~~i~~~l~~~~~  199 (526)
                      |++.+ +++||+|.|.+...+-++......++   ..+...  .+. .+++..+++.-   ++..  +    +.+   +.
T Consensus       436 i~~~r~e~k~v~h~~~~pnpf~~ltd~eL~EY---kqever--k~~~~~~d~d~~~~d---~~e~--a----kd~---~~  498 (598)
T KOG3699|consen  436 IHQVRPEVKCVCHRHYPPNPFVSLTDHELLEY---KQEVER--KGKGVYHDYDGILSD---PGEQ--A----KDL---AD  498 (598)
T ss_pred             hhhcCCcccceeecccCCCcccccCchhhhhh---hhhhhc--cCccccccccccccc---cccc--c----ccc---cc
Confidence            99999 99999999999987776665421111   222221  111 12222223321   1111  1    222   33


Q ss_pred             CeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 009774          200 ATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD  243 (526)
Q Consensus       200 ~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~  243 (526)
                      .+ ++++|||+.+.|++++ |...+...|-+|+.+.....++.+
T Consensus       499 ~p-v~~~nh~i~Tq~~~V~-aa~~~sl~~~a~~~q~s~as~~~~  540 (598)
T KOG3699|consen  499 SP-VILRNHGIMTQGESVE-AAYLLSLMELACETQLSIASATAP  540 (598)
T ss_pred             CC-cccccccceecccccc-cchhhHHHHHHHHhhhhhccccCC
Confidence            56 9999999999999999 888888999999999877666654

>smart00775 LNS2 LNS2 domain

Probab=97.79  E-value=0.00015  Score=65.98  Aligned_cols=94  Identities=9%  Similarity=0.096  Sum_probs=55.9

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchHHHHH---HHHhhcCCC--CcccccceEE-eC----------CcCCCC---CHH
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQR---LIFGNSNYG--DLRKYLSGFF-DT----------AVGNKR---ETP  463 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~---~~l~~l~~~--gl~~~fd~i~-~~----------~~~~KP---~p~  463 (526)
                      ..|++.+++++|+++|+++.++|+.+.....   ..++.+.-.  ++..  ..++ ..          ....+|   +.+
T Consensus        28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~--g~li~~~g~~~~~~~~e~i~~~~~~~K~~  105 (157)
T smart00775       28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH--GPVLLSPDRLFAALHREVISKKPEVFKIA  105 (157)
T ss_pred             CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC--ceEEEcCCcchhhhhcccccCCHHHHHHH
Confidence            4589999999999999999999999877653   455552000  1211  1222 11          112333   223


Q ss_pred             HHHHHHHHcCCCCCCcE-EEEecCHhhHHHHHHcCCc
Q 009774          464 SYVEITNSLGVDKPSEI-LFVTDVYQEATAAKAAGLE  499 (526)
Q Consensus       464 ~~~~~~~~l~~~~p~~~-l~VgDs~~Di~~A~~aG~~  499 (526)
                      ....+.+.+.-. .-.. +-+||+.+|+.+-+++|+.
T Consensus       106 ~l~~i~~~~~~~-~~~f~~~~gn~~~D~~~y~~~gi~  141 (157)
T smart00775      106 CLRDIKSLFPPQ-GNPFYAGFGNRITDVISYSAVGIP  141 (157)
T ss_pred             HHHHHHHhcCCC-CCCEEEEeCCCchhHHHHHHcCCC
Confidence            333344333211 1223 3367788999999999994

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=97.77  E-value=8.1e-05  Score=78.68  Aligned_cols=105  Identities=17%  Similarity=0.187  Sum_probs=75.0

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCC------CcccccceEE-eCC----------------cC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYG------DLRKYLSGFF-DTA----------------VG  457 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~------gl~~~fd~i~-~~~----------------~~  457 (526)
                      +..-|.+..+|++||+.|.++.++||++-.+....++.+-..      .+.++||.|+ +..                ..
T Consensus       182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~  261 (448)
T PF05761_consen  182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTET  261 (448)
T ss_dssp             EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTT
T ss_pred             ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCC
Confidence            345689999999999999999999999999999999988555      6999999988 111                00


Q ss_pred             CC--C-------------CHHHHHHHHHHcCCCCCCcEEEEecCH-hhHHHHHHc-CCcEEEEeCC
Q 009774          458 NK--R-------------ETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAA-GLEVVISIRP  506 (526)
Q Consensus       458 ~K--P-------------~p~~~~~~~~~l~~~~p~~~l~VgDs~-~Di~~A~~a-G~~~i~v~~~  506 (526)
                      ++  .             .-.....+++.+|.. ..+++||||+. .||...+.. |++|+.|.+.
T Consensus       262 g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~-g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E  326 (448)
T PF05761_consen  262 GKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWR-GKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE  326 (448)
T ss_dssp             SSEECS---SS--TC-EEEE--HHHHHHHCT---GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred             CccccccccccccCCCEeecCCHHHHHHHHccC-CCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence            11  1             112345577888997 99999999999 899988888 9999999764

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=97.72  E-value=0.00021  Score=70.17  Aligned_cols=53  Identities=15%  Similarity=0.162  Sum_probs=46.3

Q ss_pred             eCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          453 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       453 ~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      +.....+++....+.+++.+|++ +++|++|||+.+|+...+.+|..++.+.+.
T Consensus       160 di~~~~~~K~~al~~l~~~~~i~-~~~~i~~GD~~ND~~ml~~~~~~~va~~na  212 (249)
T TIGR01485       160 DILPQGSGKGQALQYLLQKLAME-PSQTLVCGDSGNDIELFEIGSVRGVIVSNA  212 (249)
T ss_pred             EEEeCCCChHHHHHHHHHHcCCC-ccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence            33556788889999999999997 999999999999999999988888888664

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=97.62  E-value=0.00014  Score=65.47  Aligned_cols=92  Identities=15%  Similarity=0.196  Sum_probs=62.1

Q ss_pred             CCCHHHHHHHHHHCCCeEEEEeCchHHHHHHH----HhhcCCCCcccccceEEeCCcCCCCCHHHHHH--HHHHcCCCCC
Q 009774          404 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLI----FGNSNYGDLRKYLSGFFDTAVGNKRETPSYVE--ITNSLGVDKP  477 (526)
Q Consensus       404 ~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~----l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~--~~~~l~~~~p  477 (526)
                      -+-+.+++..=.++|-+++.+|+.+.-..+..    .+.+   .+...-..+   ..+.||.|..|.+  .++.-++.  
T Consensus       116 KevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F---~i~~m~pv~---f~Gdk~k~~qy~Kt~~i~~~~~~--  187 (237)
T COG3700         116 KEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNF---HITNMNPVI---FAGDKPKPGQYTKTQWIQDKNIR--  187 (237)
T ss_pred             HHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhc---ccCCCccee---eccCCCCcccccccHHHHhcCce--
Confidence            34456667766778999999999875533322    2333   343222222   3455776666655  45555554  


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                         ++-|||-+||.+|+++|++.|-+-|-
T Consensus       188 ---IhYGDSD~Di~AAkeaG~RgIRilRA  213 (237)
T COG3700         188 ---IHYGDSDNDITAAKEAGARGIRILRA  213 (237)
T ss_pred             ---EEecCCchhhhHHHhcCccceeEEec
Confidence               89999999999999999999998875

>PLN02645 phosphoglycolate phosphatase

Probab=97.53  E-value=0.00051  Score=69.91  Aligned_cols=90  Identities=17%  Similarity=0.215  Sum_probs=69.4

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHH---HHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~---~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      .++||+.++|++|+++|++++++||++..   .....++.+   |+...++.++.+.       ......+++.+.. ..
T Consensus        44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~l---Gi~~~~~~I~ts~-------~~~~~~l~~~~~~-~~  112 (311)
T PLN02645         44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESL---GLNVTEEEIFSSS-------FAAAAYLKSINFP-KD  112 (311)
T ss_pred             ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHC---CCCCChhhEeehH-------HHHHHHHHhhccC-CC
Confidence            48899999999999999999999999833   333455667   8877777776332       2445666677774 66


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEEE
Q 009774          479 EILFVTDVYQEATAAKAAGLEVVI  502 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i~  502 (526)
                      +.+||+++..+.+.++++|+.++.
T Consensus       113 ~~V~viG~~~~~~~l~~~Gi~~~~  136 (311)
T PLN02645        113 KKVYVIGEEGILEELELAGFQYLG  136 (311)
T ss_pred             CEEEEEcCHHHHHHHHHCCCEEec
Confidence            678898889999999999998764

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=97.51  E-value=0.00017  Score=81.80  Aligned_cols=83  Identities=20%  Similarity=0.226  Sum_probs=66.5

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcE
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI  480 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~  480 (526)
                      .+++||+.+++++|+++|++++++|+.+....+.+.+.+   |+..++    +.....|++      ++++++ . +..+
T Consensus       567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~l---gi~~~~----~~~p~~K~~------~v~~l~-~-~~~v  631 (741)
T PRK11033        567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGEL---GIDFRA----GLLPEDKVK------AVTELN-Q-HAPL  631 (741)
T ss_pred             cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc---CCCeec----CCCHHHHHH------HHHHHh-c-CCCE
Confidence            378999999999999999999999999999999999999   885322    111222322      445555 3 5689


Q ss_pred             EEEecCHhhHHHHHHcCC
Q 009774          481 LFVTDVYQEATAAKAAGL  498 (526)
Q Consensus       481 l~VgDs~~Di~~A~~aG~  498 (526)
                      +||||+.+|..+.+++++
T Consensus       632 ~mvGDgiNDapAl~~A~v  649 (741)
T PRK11033        632 AMVGDGINDAPAMKAASI  649 (741)
T ss_pred             EEEECCHHhHHHHHhCCe
Confidence            999999999999999994

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=97.50  E-value=0.00022  Score=64.85  Aligned_cols=78  Identities=18%  Similarity=0.185  Sum_probs=60.4

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcc-ccc-ceEE--eCCcCCCCCHHHHHHHH-HHcCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KYL-SGFF--DTAVGNKRETPSYVEIT-NSLGV  474 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~-~~f-d~i~--~~~~~~KP~p~~~~~~~-~~l~~  474 (526)
                      .++++||+.++|+.|++. |+++|+||+++.++..+++.+   +.. .+| +.++  +++.  .    .+.+-+ .-++.
T Consensus        56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~l---dp~~~~F~~ri~~rd~~~--~----~~~KdL~~i~~~  125 (156)
T TIGR02250        56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLI---DPDGKYFGDRIISRDESG--S----PHTKSLLRLFPA  125 (156)
T ss_pred             EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHh---CcCCCeeccEEEEeccCC--C----CccccHHHHcCC
Confidence            347899999999999965 999999999999999999999   777 478 5555  3322  1    122334 34577


Q ss_pred             CCCCcEEEEecCHh
Q 009774          475 DKPSEILFVTDVYQ  488 (526)
Q Consensus       475 ~~p~~~l~VgDs~~  488 (526)
                      + .+.+++|+|++.
T Consensus       126 d-~~~vvivDd~~~  138 (156)
T TIGR02250       126 D-ESMVVIIDDRED  138 (156)
T ss_pred             C-cccEEEEeCCHH
Confidence            6 899999999984

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=97.30  E-value=0.0012  Score=65.05  Aligned_cols=46  Identities=15%  Similarity=0.293  Sum_probs=39.7

Q ss_pred             cCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774          456 VGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI  502 (526)
Q Consensus       456 ~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~  502 (526)
                      ...--+-...+.+++.++++ ++++++|||+.+|+...+.+|+..+.
T Consensus       184 ~~~~~K~~~i~~~~~~~~~~-~~~~~~~GD~~nD~~m~~~~~~~~a~  229 (256)
T TIGR00099       184 AKGVSKGSALQSLAEALGIS-LEDVIAFGDGMNDIEMLEAAGYGVAM  229 (256)
T ss_pred             CCCCChHHHHHHHHHHcCCC-HHHEEEeCCcHHhHHHHHhCCceeEe
Confidence            33444578899999999997 99999999999999999999987554

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=97.22  E-value=0.00085  Score=57.61  Aligned_cols=111  Identities=14%  Similarity=0.177  Sum_probs=82.5

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEE
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL  481 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l  481 (526)
                      ++|+.+.+.++.|++. +.++|.|....-......+..   |+.-  +.++     .--+|+.=.++++.|+-. -+.|+
T Consensus        30 klf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~---gi~~--~rv~-----a~a~~e~K~~ii~eLkk~-~~k~v   97 (152)
T COG4087          30 KLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFV---GIPV--ERVF-----AGADPEMKAKIIRELKKR-YEKVV   97 (152)
T ss_pred             EEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHc---CCce--eeee-----cccCHHHHHHHHHHhcCC-CcEEE
Confidence            7999999999999999 999999998888877777777   6432  2222     233556667788888874 89999


Q ss_pred             EEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCC
Q 009774          482 FVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA  524 (526)
Q Consensus       482 ~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~  524 (526)
                      ||||..+|+.+-+++-+-.+-+..++-+...-..+|.++.+..
T Consensus        98 mVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~  140 (152)
T COG4087          98 MVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIA  140 (152)
T ss_pred             EecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHH
Confidence            9999999999999998876666655443332233366665543

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=97.17  E-value=0.0083  Score=59.00  Aligned_cols=102  Identities=17%  Similarity=0.270  Sum_probs=75.3

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceE----------------------E-eC--CcC
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGF----------------------F-DT--AVG  457 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i----------------------~-~~--~~~  457 (526)
                      .-+++.++++.|+++|+++..+|..+.......++.|...|+.  |+..                      + +.  ...
T Consensus        82 ie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~--fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~  159 (252)
T PF11019_consen   82 IESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID--FSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTG  159 (252)
T ss_pred             cchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC--ccccccccCcceecccccCCCCCCceeecCeEEeC
Confidence            3479999999999999999999999988777666655433543  1111                      0 00  112


Q ss_pred             CCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHH----HHHHcCCcEEEEeCCC
Q 009774          458 NKRETPSYVEITNSLGVDKPSEILFVTDVYQEAT----AAKAAGLEVVISIRPG  507 (526)
Q Consensus       458 ~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~----~A~~aG~~~i~v~~~~  507 (526)
                      .-++-+.+...+.++|.. |+.++||+|+...+.    ++++.|+..+++.+.+
T Consensus       160 ~~~KG~~L~~fL~~~~~~-pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~  212 (252)
T PF11019_consen  160 GQDKGEVLKYFLDKINQS-PKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTG  212 (252)
T ss_pred             CCccHHHHHHHHHHcCCC-CCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcc
Confidence            345568999999999997 999999999996654    4566799888887763

The function is not known.

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=97.13  E-value=0.00071  Score=78.72  Aligned_cols=114  Identities=15%  Similarity=0.141  Sum_probs=79.6

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc----ceEEe------------------CCcCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL----SGFFD------------------TAVGNK  459 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f----d~i~~------------------~~~~~K  459 (526)
                      +|+|++.++++.|++.|+++.++|+.+......+.+.+   |+...=    ...++                  .....+
T Consensus       537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~---gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar  613 (917)
T TIGR01116       537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRI---GIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSR  613 (917)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHc---CCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEe
Confidence            68999999999999999999999999999999999999   774310    01111                  011223


Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecC
Q 009774          460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS  522 (526)
Q Consensus       460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~  522 (526)
                      -.|+-=.++.+.++-. .+.+.|+||+.+|+.+.++|++. |.+.. ++. .....+|+++.+
T Consensus       614 ~~P~~K~~iV~~lq~~-g~~va~iGDG~ND~~alk~AdVG-ia~g~-g~~-~ak~aAD~vl~d  672 (917)
T TIGR01116       614 VEPSHKSELVELLQEQ-GEIVAMTGDGVNDAPALKKADIG-IAMGS-GTE-VAKEASDMVLAD  672 (917)
T ss_pred             cCHHHHHHHHHHHHhc-CCeEEEecCCcchHHHHHhCCee-EECCC-CcH-HHHHhcCeEEcc
Confidence            3344446677777765 88999999999999999999993 32222 221 222334777765

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=97.11  E-value=0.00082  Score=66.87  Aligned_cols=35  Identities=11%  Similarity=0.292  Sum_probs=27.1

Q ss_pred             HHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774          467 EITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI  502 (526)
Q Consensus       467 ~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~  502 (526)
                      .+++.+|++ +++++.|||+.+|+..-+.+|...+.
T Consensus       195 ~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~vAm  229 (272)
T PRK15126        195 VLSQHLGLS-LADCMAFGDAMNDREMLGSVGRGFIM  229 (272)
T ss_pred             HHHHHhCCC-HHHeEEecCCHHHHHHHHHcCCceec
Confidence            455666786 88899999999999988888874443

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=97.10  E-value=0.00086  Score=66.41  Aligned_cols=41  Identities=20%  Similarity=0.301  Sum_probs=34.1

Q ss_pred             HHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEe
Q 009774          463 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISI  504 (526)
Q Consensus       463 ~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~  504 (526)
                      ...+.+++.+|++ +++++.|||+.+|+..=+.+|...+.-+
T Consensus       192 ~al~~l~~~lgi~-~~~v~afGD~~ND~~Ml~~ag~gvam~N  232 (264)
T COG0561         192 YALQRLAKLLGIK-LEEVIAFGDSTNDIEMLEVAGLGVAMGN  232 (264)
T ss_pred             HHHHHHHHHhCCC-HHHeEEeCCccccHHHHHhcCeeeeccC
Confidence            3556678889997 9999999999999999999988766543

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=97.08  E-value=0.0012  Score=65.51  Aligned_cols=17  Identities=24%  Similarity=0.344  Sum_probs=15.0

Q ss_pred             CCceEEEEecccccccc
Q 009774          282 LFPRCIVLDIEGTTTPI  298 (526)
Q Consensus       282 ~~ikaVlFD~DGTL~d~  298 (526)
                      |++|.|+|||||||++.
T Consensus         1 m~~kli~~DlDGTLl~~   17 (270)
T PRK10513          1 MAIKLIAIDMDGTLLLP   17 (270)
T ss_pred             CceEEEEEecCCcCcCC
Confidence            46899999999999874

>PRK10976 putative hydrolase; Provisional

Probab=96.99  E-value=0.0013  Score=65.22  Aligned_cols=36  Identities=17%  Similarity=0.258  Sum_probs=29.5

Q ss_pred             HHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774          466 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI  502 (526)
Q Consensus       466 ~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~  502 (526)
                      +.+++.+|++ +++++.|||+.+|+..-+.+|...+.
T Consensus       196 ~~l~~~lgi~-~~~viafGD~~NDi~Ml~~ag~~vAm  231 (266)
T PRK10976        196 EAVAKKLGYS-LKDCIAFGDGMNDAEMLSMAGKGCIM  231 (266)
T ss_pred             HHHHHHcCCC-HHHeEEEcCCcccHHHHHHcCCCeee
Confidence            3455677886 99999999999999999999986554

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=96.93  E-value=0.0035  Score=59.67  Aligned_cols=85  Identities=15%  Similarity=0.133  Sum_probs=56.7

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHH-HHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLA-QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~-~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      ..+.||+.++|+...++|.++..+||...+. ....++.+...|+...-..-+---...|++..-++.+-+    . -+-
T Consensus       121 sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk~~k~Ke~R~~~v~k----~-~~i  195 (274)
T COG2503         121 SKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKKDKKSKEVRRQAVEK----D-YKI  195 (274)
T ss_pred             cccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEeeCCCcHHHHHHHHhh----c-cce
Confidence            3689999999999999999999999998876 555555443225553333221001234555555555555    2 347


Q ss_pred             EEEEecCHhhH
Q 009774          480 ILFVTDVYQEA  490 (526)
Q Consensus       480 ~l~VgDs~~Di  490 (526)
                      +++|||+..|-
T Consensus       196 Vm~vGDNl~DF  206 (274)
T COG2503         196 VMLVGDNLDDF  206 (274)
T ss_pred             eeEecCchhhh
Confidence            89999998764

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=96.92  E-value=0.0029  Score=64.69  Aligned_cols=85  Identities=15%  Similarity=0.148  Sum_probs=53.3

Q ss_pred             cCCCHHHHHHHHHHC----CCeEEEEeCch---HHH-HHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCC
Q 009774          403 VFDDVPEALEKWHSL----GTKVYIYSSGS---RLA-QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGV  474 (526)
Q Consensus       403 l~pgv~~~L~~L~~~----G~~l~vvTn~~---~~~-~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~  474 (526)
                      ++|++.++|+.|+++    |+++.++||+.   ... .+.+.+.+   |+.---+.++.+.       ......++..  
T Consensus        17 ~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~l---G~~~~~~~i~~s~-------~~~~~ll~~~--   84 (321)
T TIGR01456        17 PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLL---GVDVSPLQVIQSH-------SPYKSLVNKY--   84 (321)
T ss_pred             ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHc---CCCCCHHHHHhhh-------HHHHHHHHHc--
Confidence            457778888889888    99999999996   333 44444777   6643333333221       1234444443  


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774          475 DKPSEILFVTDVYQEATAAKAAGLEVVI  502 (526)
Q Consensus       475 ~~p~~~l~VgDs~~Di~~A~~aG~~~i~  502 (526)
                      . . .++.||.+. -.+.+..+|+..+.
T Consensus        85 ~-~-~v~viG~~~-~~~~l~~~G~~~vv  109 (321)
T TIGR01456        85 E-K-RILAVGTGS-VRGVAEGYGFQNVV  109 (321)
T ss_pred             C-C-ceEEEeChH-HHHHHHHcCCcccc
Confidence            2 2 678888654 46666789987664

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.90  E-value=0.0017  Score=64.33  Aligned_cols=37  Identities=16%  Similarity=0.180  Sum_probs=30.9

Q ss_pred             HHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccc
Q 009774          407 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK  446 (526)
Q Consensus       407 v~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~  446 (526)
                      +.+.|++|+++|++++++|+.+...+..+.+.+   ++..
T Consensus        23 a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~L---gl~~   59 (302)
T PRK12702         23 ARQALAALERRSIPLVLYSLRTRAQLEHLCRQL---RLEH   59 (302)
T ss_pred             HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHh---CCCC
Confidence            447788889999999999999998888888888   6654

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.76  E-value=0.0029  Score=62.95  Aligned_cols=38  Identities=13%  Similarity=0.023  Sum_probs=31.3

Q ss_pred             HHHHHHHcCC---CCCCcEEEEecCHhhHHHHHHcCCcEEEE
Q 009774          465 YVEITNSLGV---DKPSEILFVTDVYQEATAAKAAGLEVVIS  503 (526)
Q Consensus       465 ~~~~~~~l~~---~~p~~~l~VgDs~~Di~~A~~aG~~~i~v  503 (526)
                      .+.+++.+|+   + +++++.|||+.+|+..=+.+|...+.-
T Consensus       192 l~~l~~~lgi~~~~-~~~viafGDs~NDi~Ml~~ag~gvAM~  232 (271)
T PRK03669        192 ANWLIATYQQLSGT-RPTTLGLGDGPNDAPLLDVMDYAVVVK  232 (271)
T ss_pred             HHHHHHHHHhhcCC-CceEEEEcCCHHHHHHHHhCCEEEEec
Confidence            4556777888   8 999999999999999999999755543

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=96.76  E-value=0.0076  Score=58.95  Aligned_cols=80  Identities=19%  Similarity=0.176  Sum_probs=62.9

Q ss_pred             CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeC---Cc----C--------------------
Q 009774          405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT---AV----G--------------------  457 (526)
Q Consensus       405 pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~---~~----~--------------------  457 (526)
                      |.+.+.|..||++|+-+++=|-++++.++..++.+   +|.++||.++..   .+    .                    
T Consensus       145 ~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~---~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv  221 (297)
T PF05152_consen  145 PAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKEL---KLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDV  221 (297)
T ss_pred             hHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHh---CCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeC
Confidence            66778899999999999999999999999999999   999999999821   00    0                    


Q ss_pred             -----CCCCHHHHHHHHHHcCCCCCCcEEEEecCH
Q 009774          458 -----NKRETPSYVEITNSLGVDKPSEILFVTDVY  487 (526)
Q Consensus       458 -----~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~  487 (526)
                           -...|.+.+..+++.|+.--..+-.|+|-.
T Consensus       222 ~~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~  256 (297)
T PF05152_consen  222 TNVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK  256 (297)
T ss_pred             CcCCCCCCCCeehHHHHHHcCCceeeeEEEeccCc
Confidence                 123577888888888885235666777765

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=96.70  E-value=0.003  Score=61.15  Aligned_cols=34  Identities=29%  Similarity=0.285  Sum_probs=26.0

Q ss_pred             CHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhc
Q 009774          406 DVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS  439 (526)
Q Consensus       406 gv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l  439 (526)
                      .+.++|++|+++|++++++|+.+.......++.+
T Consensus        19 ~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~l   52 (225)
T TIGR02461        19 PAREALEELKDLGFPIVFVSSKTRAEQEYYREEL   52 (225)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc
Confidence            3456777788888888888888877777777777

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PTZ00174 phosphomannomutase; Provisional

Probab=96.70  E-value=0.0032  Score=61.79  Aligned_cols=19  Identities=21%  Similarity=0.366  Sum_probs=16.5

Q ss_pred             CCCceEEEEeccccccccc
Q 009774          281 GLFPRCIVLDIEGTTTPIS  299 (526)
Q Consensus       281 ~~~ikaVlFD~DGTL~d~~  299 (526)
                      .|.+|.|+|||||||++..
T Consensus         2 ~~~~klia~DlDGTLL~~~   20 (247)
T PTZ00174          2 EMKKTILLFDVDGTLTKPR   20 (247)
T ss_pred             CCCCeEEEEECcCCCcCCC
Confidence            4779999999999999754

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=96.63  E-value=0.02  Score=51.48  Aligned_cols=91  Identities=19%  Similarity=0.209  Sum_probs=64.4

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcc-cccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEE
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL  481 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~-~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l  481 (526)
                      +-.++...|..++++ .+++.+|....+..+....-+   ... -.+|.+.-.....|      ..+.+..+++     +
T Consensus        73 ~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~~l---~~q~ih~~~l~i~g~h~K------V~~vrth~id-----l  137 (194)
T COG5663          73 LAQLVKQVLPSLKEE-HRLIYITARKADLTRITYAWL---FIQNIHYDHLEIVGLHHK------VEAVRTHNID-----L  137 (194)
T ss_pred             HHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHHHH---HHhccchhhhhhhccccc------chhhHhhccC-----c
Confidence            446888999999987 589999998887766554444   111 12344331122334      4567788887     8


Q ss_pred             EEecCH-hhHHHHHHcCCcEEEEeCCCC
Q 009774          482 FVTDVY-QEATAAKAAGLEVVISIRPGN  508 (526)
Q Consensus       482 ~VgDs~-~Di~~A~~aG~~~i~v~~~~~  508 (526)
                      ++.|+. +-+..|+++|++.+.++.+.+
T Consensus       138 f~ed~~~na~~iAk~~~~~vilins~yn  165 (194)
T COG5663         138 FFEDSHDNAGQIAKNAGIPVILINSPYN  165 (194)
T ss_pred             cccccCchHHHHHHhcCCcEEEecCccc
Confidence            999998 788999999999999998744

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=96.41  E-value=0.014  Score=55.92  Aligned_cols=77  Identities=13%  Similarity=0.047  Sum_probs=51.6

Q ss_pred             CCeEEE-EeCchHHHHHHHHhhcCCCCcc----cccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHH
Q 009774          418 GTKVYI-YSSGSRLAQRLIFGNSNYGDLR----KYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATA  492 (526)
Q Consensus       418 G~~l~v-vTn~~~~~~~~~l~~l~~~gl~----~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~  492 (526)
                      ++.+.+ .++.........++..   ++.    .+|..+.. ....|+  .....+++.+|++ +++|++|||+.+|+..
T Consensus       138 ~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~ei~~-~~~~Kg--~al~~l~~~lgi~-~~~vi~~GD~~NDi~m  210 (221)
T TIGR02463       138 SVPLLWRDSDSRMPRFTALLADL---GLAIVQGNRFSHVLG-ASSSKG--KAANWLKATYNQP-DVKTLGLGDGPNDLPL  210 (221)
T ss_pred             CccEEecCchhHHHHHHHHHHHc---CCeEEecCCeeEEec-CCCCHH--HHHHHHHHHhCCC-CCcEEEECCCHHHHHH
Confidence            333333 3444555555566655   554    33333331 122344  5689999999997 9999999999999999


Q ss_pred             HHHcCCcEE
Q 009774          493 AKAAGLEVV  501 (526)
Q Consensus       493 A~~aG~~~i  501 (526)
                      .+.+|...+
T Consensus       211 l~~ag~~va  219 (221)
T TIGR02463       211 LEVADYAVV  219 (221)
T ss_pred             HHhCCceEE
Confidence            999997654

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=96.27  E-value=0.0055  Score=53.42  Aligned_cols=29  Identities=28%  Similarity=0.282  Sum_probs=24.0

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchHHH
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSRLA  431 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~  431 (526)
                      +.+++.+.|++|+++|+.++++|..+...
T Consensus        25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~   53 (126)
T TIGR01689        25 PILAVIEKLRHYKALGFEIVISSSRNMRT   53 (126)
T ss_pred             cCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence            45677788999999999999999887654

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=96.26  E-value=0.0075  Score=57.92  Aligned_cols=36  Identities=14%  Similarity=0.137  Sum_probs=31.4

Q ss_pred             HHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcc
Q 009774          407 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR  445 (526)
Q Consensus       407 v~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~  445 (526)
                      ..++|++|+++|++++++||.+...+...++.+   ++.
T Consensus        21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l---~~~   56 (221)
T TIGR02463        21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKAL---GLT   56 (221)
T ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---CCC
Confidence            447788889999999999999999999999998   664

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=96.21  E-value=0.007  Score=60.29  Aligned_cols=101  Identities=11%  Similarity=0.078  Sum_probs=74.7

Q ss_pred             CCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE-e-C---Cc--CCCC----CHH----H----
Q 009774          404 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-D-T---AV--GNKR----ETP----S----  464 (526)
Q Consensus       404 ~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~-~-~---~~--~~KP----~p~----~----  464 (526)
                      -|....+|++|+++|.++.++||+|-..+..-++.+-...+.++||.++ . .   ..  ..||    +.+    .    
T Consensus       242 ~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv  321 (510)
T KOG2470|consen  242 NPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKV  321 (510)
T ss_pred             cHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhh
Confidence            4778899999999999999999999999998888887778999999887 1 1   11  1112    111    1    


Q ss_pred             -------------HHHHHHHcCCCCCCcEEEEecCH-hhHHHHH-HcCCcEEEEeC
Q 009774          465 -------------YVEITNSLGVDKPSEILFVTDVY-QEATAAK-AAGLEVVISIR  505 (526)
Q Consensus       465 -------------~~~~~~~l~~~~p~~~l~VgDs~-~Di~~A~-~aG~~~i~v~~  505 (526)
                                   ....++--|-. ..+++|+||++ +|+..-. +.|+++-.+..
T Consensus       322 ~klekgkiYy~G~l~~flelt~Wr-G~~VlYFGDHlySDLad~tlkhgWRTgAII~  376 (510)
T KOG2470|consen  322 DKLEKGKIYYQGNLKSFLELTGWR-GPRVLYFGDHLYSDLADLTLKHGWRTGAIIP  376 (510)
T ss_pred             hhcccCceeeeccHHHHHHHhccC-CCeeEEecCcchhhhhhhHhhcccccccchH
Confidence                         11233444564 78999999999 8998776 89998876654

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=96.16  E-value=0.013  Score=65.22  Aligned_cols=88  Identities=14%  Similarity=0.228  Sum_probs=68.9

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEE
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL  481 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l  481 (526)
                      ++.||+.+.+++|++.|+++.++|..+......+.+.+   |+.++|.       ..+|  +-=..+.+++.-. ...+.
T Consensus       446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~l---GI~~v~a-------~~~P--edK~~~v~~lq~~-g~~Va  512 (675)
T TIGR01497       446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEA---GVDDFIA-------EATP--EDKIALIRQEQAE-GKLVA  512 (675)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc---CCCEEEc-------CCCH--HHHHHHHHHHHHc-CCeEE
Confidence            68899999999999999999999999999999999999   8864332       2233  2223344444443 56799


Q ss_pred             EEecCHhhHHHHHHcCCcEEE
Q 009774          482 FVTDVYQEATAAKAAGLEVVI  502 (526)
Q Consensus       482 ~VgDs~~Di~~A~~aG~~~i~  502 (526)
                      |+||..+|..+-+++++....
T Consensus       513 mvGDG~NDapAL~~AdvGiAm  533 (675)
T TIGR01497       513 MTGDGTNDAPALAQADVGVAM  533 (675)
T ss_pred             EECCCcchHHHHHhCCEeEEe
Confidence            999999999999999876543

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>PLN02887 hydrolase family protein

Probab=96.08  E-value=0.01  Score=65.19  Aligned_cols=35  Identities=31%  Similarity=0.455  Sum_probs=29.2

Q ss_pred             HHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774          467 EITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI  502 (526)
Q Consensus       467 ~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~  502 (526)
                      .+++.+|++ +++++.|||+.+|+..-+.+|...+.
T Consensus       514 ~L~e~lGI~-~eeviAFGDs~NDIeMLe~AG~gVAM  548 (580)
T PLN02887        514 MLLNHLGVS-PDEIMAIGDGENDIEMLQLASLGVAL  548 (580)
T ss_pred             HHHHHcCCC-HHHEEEEecchhhHHHHHHCCCEEEe
Confidence            345677887 99999999999999999999985544

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=96.01  E-value=0.011  Score=57.14  Aligned_cols=37  Identities=22%  Similarity=0.353  Sum_probs=29.3

Q ss_pred             HHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774          464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       464 ~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                      ..+.+++.+|++ +++++.|||+.+|+..-+.+|...+
T Consensus       190 ai~~l~~~~~i~-~~~~~~~GD~~ND~~Ml~~~~~~~a  226 (254)
T PF08282_consen  190 AIKYLLEYLGIS-PEDIIAFGDSENDIEMLELAGYSVA  226 (254)
T ss_dssp             HHHHHHHHHTTS-GGGEEEEESSGGGHHHHHHSSEEEE
T ss_pred             HHHHHhhhcccc-cceeEEeecccccHhHHhhcCeEEE
Confidence            445566777886 8899999999999999988887644

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=95.93  E-value=0.37  Score=52.08  Aligned_cols=88  Identities=14%  Similarity=0.104  Sum_probs=51.5

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhh-cCCCCcccc--------cceEEeCCcCCC-C--CHHHHHHHHH
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN-SNYGDLRKY--------LSGFFDTAVGNK-R--ETPSYVEITN  470 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~-l~~~gl~~~--------fd~i~~~~~~~K-P--~p~~~~~~~~  470 (526)
                      ++|.+.+   .++++|.. +|+|.+++..++.+++. +   |++..        .++.+....... +  -.+-...+.+
T Consensus       111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~L---Gid~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~  183 (497)
T PLN02177        111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFL---GADKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLK  183 (497)
T ss_pred             cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcC---CCCEEEecccEECcCCEEeeeecCCCCCccHHHHHHHHH
Confidence            4555544   44567754 99999999999999975 6   54422        122220000000 1  0112333445


Q ss_pred             HcCCCCCCcEEEEecCHhhHHHHHHcCCc
Q 009774          471 SLGVDKPSEILFVTDVYQEATAAKAAGLE  499 (526)
Q Consensus       471 ~l~~~~p~~~l~VgDs~~Di~~A~~aG~~  499 (526)
                      .+|.+ ... +..|||.+|..--..++=.
T Consensus       184 ~~g~~-~~~-~aYgDS~sD~plL~~a~e~  210 (497)
T PLN02177        184 EFGDA-LPD-LGLGDRETDHDFMSICKEG  210 (497)
T ss_pred             HhCCC-Cce-EEEECCccHHHHHHhCCcc
Confidence            56653 334 8999999999888877743

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=95.90  E-value=0.019  Score=64.21  Aligned_cols=84  Identities=24%  Similarity=0.288  Sum_probs=67.1

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEE
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL  481 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l  481 (526)
                      .+.|++.+.+++||++|+++.++|+-++...+.+.+.+   |+++++-..       +|+-  =....+++.-. -..+.
T Consensus       537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~l---GId~v~Ael-------lPed--K~~~V~~l~~~-g~~Va  603 (713)
T COG2217         537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKEL---GIDEVRAEL-------LPED--KAEIVRELQAE-GRKVA  603 (713)
T ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---ChHhheccC-------CcHH--HHHHHHHHHhc-CCEEE
Confidence            68899999999999999999999999999999999999   886654443       3321  23455555554 57899


Q ss_pred             EEecCHhhHHHHHHcCC
Q 009774          482 FVTDVYQEATAAKAAGL  498 (526)
Q Consensus       482 ~VgDs~~Di~~A~~aG~  498 (526)
                      ||||..||..+=..|-+
T Consensus       604 mVGDGINDAPALA~AdV  620 (713)
T COG2217         604 MVGDGINDAPALAAADV  620 (713)
T ss_pred             EEeCCchhHHHHhhcCe
Confidence            99999999977776654

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=95.89  E-value=0.023  Score=63.45  Aligned_cols=85  Identities=12%  Similarity=0.199  Sum_probs=68.4

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEE
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL  481 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l  481 (526)
                      ++.||+.+.+++||+.|+++.++|+-+......+.+.+   |+.++|..       .+|  +-=.++.+.+.-. .+-+.
T Consensus       441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~el---GI~~v~A~-------~~P--edK~~iV~~lQ~~-G~~Va  507 (673)
T PRK14010        441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEA---GVDRFVAE-------CKP--EDKINVIREEQAK-GHIVA  507 (673)
T ss_pred             CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCceEEcC-------CCH--HHHHHHHHHHHhC-CCEEE
Confidence            68899999999999999999999999999999999999   88653322       233  3334455555554 56799


Q ss_pred             EEecCHhhHHHHHHcCCc
Q 009774          482 FVTDVYQEATAAKAAGLE  499 (526)
Q Consensus       482 ~VgDs~~Di~~A~~aG~~  499 (526)
                      |+||..||..+=++|.+-
T Consensus       508 MtGDGvNDAPALa~ADVG  525 (673)
T PRK14010        508 MTGDGTNDAPALAEANVG  525 (673)
T ss_pred             EECCChhhHHHHHhCCEE
Confidence            999999999999999774

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=95.68  E-value=0.021  Score=56.28  Aligned_cols=39  Identities=10%  Similarity=0.059  Sum_probs=30.5

Q ss_pred             HHHHHHHcCCCC--CCcEEEEecCHhhHHHHHHcCCcEEEEe
Q 009774          465 YVEITNSLGVDK--PSEILFVTDVYQEATAAKAAGLEVVISI  504 (526)
Q Consensus       465 ~~~~~~~l~~~~--p~~~l~VgDs~~Di~~A~~aG~~~i~v~  504 (526)
                      .+++++.+++ +  ++++++|||+.+|+...+.+|...+.-+
T Consensus       181 i~~l~~~~~i-~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~N  221 (256)
T TIGR01486       181 ANALKQFYNQ-PGGAIKVVGLGDSPNDLPLLEVVDLAVVVPG  221 (256)
T ss_pred             HHHHHHHHhh-cCCCceEEEEcCCHhhHHHHHHCCEEEEeCC
Confidence            3455666676 5  7889999999999999999998766544

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=95.67  E-value=0.028  Score=62.80  Aligned_cols=87  Identities=14%  Similarity=0.192  Sum_probs=68.3

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEE
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL  481 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l  481 (526)
                      ++.||+.+.+++||+.|+++.++|+.+....+.+.+.+   |+.++|-       ..+|  +-=..+.+++.-. .+-+.
T Consensus       445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el---GId~v~A-------~~~P--edK~~iV~~lQ~~-G~~Va  511 (679)
T PRK01122        445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA---GVDDFLA-------EATP--EDKLALIRQEQAE-GRLVA  511 (679)
T ss_pred             cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCcEEEc-------cCCH--HHHHHHHHHHHHc-CCeEE
Confidence            67899999999999999999999999999999999999   8865322       1233  2234445555554 56799


Q ss_pred             EEecCHhhHHHHHHcCCcEE
Q 009774          482 FVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       482 ~VgDs~~Di~~A~~aG~~~i  501 (526)
                      |+||..+|..+-++|.+-..
T Consensus       512 MtGDGvNDAPALa~ADVGIA  531 (679)
T PRK01122        512 MTGDGTNDAPALAQADVGVA  531 (679)
T ss_pred             EECCCcchHHHHHhCCEeEE
Confidence            99999999999999876443

>PLN02423 phosphomannomutase

Probab=95.50  E-value=0.085  Score=51.70  Aligned_cols=31  Identities=19%  Similarity=0.079  Sum_probs=27.4

Q ss_pred             CCCCcEEEEec----CHhhHHHHHHcCCcEEEEeCC
Q 009774          475 DKPSEILFVTD----VYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       475 ~~p~~~l~VgD----s~~Di~~A~~aG~~~i~v~~~  506 (526)
                      + +++++.+||    +.+|++.-+.-|+.++-|..+
T Consensus       199 ~-~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~  233 (245)
T PLN02423        199 D-FDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSP  233 (245)
T ss_pred             C-cCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCH
Confidence            7 999999999    689999988889999888654

>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]

Probab=95.47  E-value=0.054  Score=55.13  Aligned_cols=95  Identities=18%  Similarity=0.241  Sum_probs=64.5

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHH--------H----HHHHHhhcCCCCcccccceEEe--CCcCCCCCHHHHHH
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRL--------A----QRLIFGNSNYGDLRKYLSGFFD--TAVGNKRETPSYVE  467 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~--------~----~~~~l~~l~~~gl~~~fd~i~~--~~~~~KP~p~~~~~  467 (526)
                      .++|.+..=|+.|.+.||++++.||....        .    .+.+...+   ++.  |.....  ....+||-..++..
T Consensus       104 ~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl---~vP--i~~~~A~~~~~yRKP~tGMwe~  178 (422)
T KOG2134|consen  104 ILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANL---GVP--IQLLAAIIKGKYRKPSTGMWEF  178 (422)
T ss_pred             eeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhc---CCc--eEEeeeccCCcccCcchhHHHH
Confidence            37788899999999999999999998522        2    22223333   322  222221  23568999999999


Q ss_pred             HHHHcCCC---CCCcEEEEecC---------------HhhHHHHHHcCCcEE
Q 009774          468 ITNSLGVD---KPSEILFVTDV---------------YQEATAAKAAGLEVV  501 (526)
Q Consensus       468 ~~~~l~~~---~p~~~l~VgDs---------------~~Di~~A~~aG~~~i  501 (526)
                      .++.++-.   .-..+.||||.               ..|+.-|.++|+...
T Consensus       179 ~~~~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~  230 (422)
T KOG2134|consen  179 LKRLENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFK  230 (422)
T ss_pred             HHHHhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCccC
Confidence            88776532   04566788873               357889999999765

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=95.30  E-value=0.032  Score=61.54  Aligned_cols=31  Identities=16%  Similarity=0.040  Sum_probs=22.5

Q ss_pred             HHHHHHHHCCCeEEEEeCchHHHHHHHHhhc
Q 009774          409 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNS  439 (526)
Q Consensus       409 ~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l  439 (526)
                      +.|++|+++|++++++|+.+...+...++.+
T Consensus       440 eAL~~L~ekGI~~VIATGRs~~~i~~l~~~L  470 (694)
T PRK14502        440 DALRLLKDKELPLVFCSAKTMGEQDLYRNEL  470 (694)
T ss_pred             HHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc
Confidence            5566777777777777777777766666666

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=95.21  E-value=0.14  Score=51.26  Aligned_cols=88  Identities=16%  Similarity=0.253  Sum_probs=59.8

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCch---HHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~---~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      .++||+.++|++|+++|++++++||++   +......++.+   |+....+.++.       ........+++.... +.
T Consensus        18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~---G~~~~~~~i~t-------s~~~~~~~l~~~~~~-~~   86 (279)
T TIGR01452        18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARL---GFNGLAEQLFS-------SALCAARLLRQPPDA-PK   86 (279)
T ss_pred             eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc---CCCCChhhEec-------HHHHHHHHHHhhCcC-CC
Confidence            488999999999999999999999965   33333466777   77544444441       123344556665554 67


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEE
Q 009774          479 EILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                      ++++||+. ......+..|+..+
T Consensus        87 ~v~~iG~~-~~~~~l~~~g~~~~  108 (279)
T TIGR01452        87 AVYVIGEE-GLRAELDAAGIRLA  108 (279)
T ss_pred             EEEEEcCH-HHHHHHHHCCCEEe
Confidence            89999985 33445567788754

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=95.05  E-value=0.014  Score=53.04  Aligned_cols=82  Identities=23%  Similarity=0.242  Sum_probs=56.4

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCc-ccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDL-RKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl-~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      +.+.||+.++|+.|.+. |.++|.|++....++.+++.+   .- ..+|+.++  +.+...+.   .+.+-++.++-+ .
T Consensus        35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~l---dp~~~~~~~~~~r~~~~~~~~---~~~KdL~~l~~~-~  106 (159)
T PF03031_consen   35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDAL---DPNGKLFSRRLYRDDCTFDKG---SYIKDLSKLGRD-L  106 (159)
T ss_dssp             EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHH---TTTTSSEEEEEEGGGSEEETT---EEE--GGGSSS--G
T ss_pred             EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhh---hhhcccccccccccccccccc---ccccchHHHhhc-c
Confidence            35789999999999775 999999999999999999998   44 46788777  22221111   112566677876 8


Q ss_pred             CcEEEEecCHhhH
Q 009774          478 SEILFVTDVYQEA  490 (526)
Q Consensus       478 ~~~l~VgDs~~Di  490 (526)
                      +++++|+|++.-.
T Consensus       107 ~~vvivDD~~~~~  119 (159)
T PF03031_consen  107 DNVVIVDDSPRKW  119 (159)
T ss_dssp             GGEEEEES-GGGG
T ss_pred             ccEEEEeCCHHHe
Confidence            9999999998643

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>TIGR00685 T6PP trehalose-phosphatase

Probab=95.03  E-value=0.027  Score=55.09  Aligned_cols=59  Identities=7%  Similarity=-0.077  Sum_probs=46.4

Q ss_pred             HHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHc-------CCcEEEEeCCCCCCCCCCCCCeEecCCCC
Q 009774          462 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAA-------GLEVVISIRPGNGPLPENHGFKTINSFAE  525 (526)
Q Consensus       462 p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~a-------G~~~i~v~~~~~~~~~~~~~~~~i~~l~e  525 (526)
                      ...+..++++++.. +++++||||+.+|+.+++.+       |..++.+..+.    ....+++++++..|
T Consensus       169 g~a~~~~~~~~~~~-~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~----~~~~A~~~~~~~~~  234 (244)
T TIGR00685       169 GEIVKRLLWHQPGS-GISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS----KKTVAKFHLTGPQQ  234 (244)
T ss_pred             HHHHHHHHHhcccC-CCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC----cCCCceEeCCCHHH
Confidence            48899999999997 99999999999999999999       77788876431    12223677776554

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=95.02  E-value=0.036  Score=63.28  Aligned_cols=95  Identities=17%  Similarity=0.100  Sum_probs=69.3

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc--------------------ceEE-eCCcCCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--------------------SGFF-DTAVGNKR  460 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f--------------------d~i~-~~~~~~KP  460 (526)
                      ++.|++.+++++|++.|+++.++|+.+....+.+.+.+   |+.+..                    +.++ +.....+=
T Consensus       442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l---GI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~  518 (755)
T TIGR01647       442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRL---GLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEV  518 (755)
T ss_pred             CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence            68899999999999999999999999999999999999   885410                    0000 00011222


Q ss_pred             CHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 009774          461 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV  500 (526)
Q Consensus       461 ~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~  500 (526)
                      .|+-=..+.+.+.-. .+.+.|+||..+|..+-++|.+-.
T Consensus       519 ~Pe~K~~iV~~lq~~-G~~VamvGDGvNDapAL~~AdVGI  557 (755)
T TIGR01647       519 FPEHKYEIVEILQKR-GHLVGMTGDGVNDAPALKKADVGI  557 (755)
T ss_pred             CHHHHHHHHHHHHhc-CCEEEEEcCCcccHHHHHhCCeeE
Confidence            333334455555554 668999999999999999987753

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=95.00  E-value=0.031  Score=54.87  Aligned_cols=44  Identities=14%  Similarity=0.194  Sum_probs=35.2

Q ss_pred             CHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          461 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       461 ~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      +-....+++++++++ +++++.+|||.+|+..- ..+..+|.|.+.
T Consensus       166 K~~Al~~L~~~~~~~-~~~vl~aGDSgND~~mL-~~~~~~vvV~Na  209 (247)
T PF05116_consen  166 KGAALRYLMERWGIP-PEQVLVAGDSGNDLEML-EGGDHGVVVGNA  209 (247)
T ss_dssp             HHHHHHHHHHHHT---GGGEEEEESSGGGHHHH-CCSSEEEE-TTS
T ss_pred             HHHHHHHHHHHhCCC-HHHEEEEeCCCCcHHHH-cCcCCEEEEcCC
Confidence            457899999999997 99999999999999765 777888888654

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=94.85  E-value=0.2  Score=45.30  Aligned_cols=102  Identities=12%  Similarity=0.127  Sum_probs=59.9

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchHHHH---HHHHhhcCCCCcccccce--EEe--C------CcCCCCCHHHHHH-H
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQ---RLIFGNSNYGDLRKYLSG--FFD--T------AVGNKRETPSYVE-I  468 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~---~~~l~~l~~~gl~~~fd~--i~~--~------~~~~KP~p~~~~~-~  468 (526)
                      ..||+.++.+.++++||++.-+|+.+.-..   +..|+...-.|. .+=+.  ++.  .      ...-.++|+.|.. +
T Consensus        28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~-~lP~Gpv~~sP~~l~~al~rEvi~~~p~~fK~~~  106 (157)
T PF08235_consen   28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGH-NLPDGPVLLSPDSLFSALHREVISKDPEEFKIAC  106 (157)
T ss_pred             hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCc-cCCCCCEEECCcchhhhhhccccccChHHHHHHH
Confidence            349999999999999999999999985543   333443311111 11111  111  0      1122456777766 3


Q ss_pred             HHHc-CCCC-CCcEEE--EecCHhhHHHHHHcCCc--EEEEeC
Q 009774          469 TNSL-GVDK-PSEILF--VTDVYQEATAAKAAGLE--VVISIR  505 (526)
Q Consensus       469 ~~~l-~~~~-p~~~l~--VgDs~~Di~~A~~aG~~--~i~v~~  505 (526)
                      |+.+ ..-+ ...-++  .|++.+|+.+-+++|+.  .|++..
T Consensus       107 L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip~~rIF~I~  149 (157)
T PF08235_consen  107 LRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIPKSRIFIIN  149 (157)
T ss_pred             HHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCChhhEEEEC
Confidence            3444 2211 123333  57999999999999994  355543

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=94.76  E-value=0.047  Score=51.57  Aligned_cols=44  Identities=20%  Similarity=0.220  Sum_probs=39.6

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774          457 GNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       457 ~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                      ...+++..++.++++++++ ++++++|||+.+|+..++.+|+..+
T Consensus       160 ~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~~~~~~~~~va  203 (204)
T TIGR01484       160 AGVDKGSALQALLKELNGK-RDEILAFGDSGNDEEMFEVAGLAVA  203 (204)
T ss_pred             CCCChHHHHHHHHHHhCCC-HHHEEEEcCCHHHHHHHHHcCCceE
Confidence            4577889999999999997 9999999999999999999998654

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=94.52  E-value=0.057  Score=51.03  Aligned_cols=12  Identities=25%  Similarity=0.509  Sum_probs=9.4

Q ss_pred             EEEecccccccc
Q 009774          287 IVLDIEGTTTPI  298 (526)
Q Consensus       287 VlFD~DGTL~d~  298 (526)
                      |+||+||||++.
T Consensus         2 i~~D~DgTL~~~   13 (204)
T TIGR01484         2 LFFDLDGTLLDP   13 (204)
T ss_pred             EEEeCcCCCcCC
Confidence            678888888864

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=94.40  E-value=0.059  Score=62.68  Aligned_cols=93  Identities=18%  Similarity=0.165  Sum_probs=68.7

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEe------------------CCcCCCCCHH
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD------------------TAVGNKRETP  463 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~------------------~~~~~KP~p~  463 (526)
                      ++.|++.+++++|++.|+++.++|+-+......+.+.+   |+..  +.++.                  .....+=.|+
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l---GI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe  624 (902)
T PRK10517        550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEV---GLDA--GEVLIGSDIETLSDDELANLAERTTLFARLTPM  624 (902)
T ss_pred             cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc---CCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHH
Confidence            67899999999999999999999999999999999999   8852  11110                  0111222333


Q ss_pred             HHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 009774          464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV  500 (526)
Q Consensus       464 ~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~  500 (526)
                      -=.++.+.+.-. .+-+.|+||..+|..+-++|.+-.
T Consensus       625 ~K~~IV~~Lq~~-G~vVam~GDGvNDaPALk~ADVGI  660 (902)
T PRK10517        625 HKERIVTLLKRE-GHVVGFMGDGINDAPALRAADIGI  660 (902)
T ss_pred             HHHHHHHHHHHC-CCEEEEECCCcchHHHHHhCCEEE
Confidence            334455555544 567999999999999999987643

>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=94.37  E-value=0.33  Score=43.10  Aligned_cols=96  Identities=14%  Similarity=0.164  Sum_probs=62.0

Q ss_pred             ccCCCHHHHHHHHHHC-C-CeEEEEeCchHH-------HHHHHHh-hcCCCCcccccceEEeCCcCCCC--CHHHHHHHH
Q 009774          402 EVFDDVPEALEKWHSL-G-TKVYIYSSGSRL-------AQRLIFG-NSNYGDLRKYLSGFFDTAVGNKR--ETPSYVEIT  469 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~-G-~~l~vvTn~~~~-------~~~~~l~-~l~~~gl~~~fd~i~~~~~~~KP--~p~~~~~~~  469 (526)
                      ..+|.-..-+++++.. | .-++++||+...       .+...++ ..   |+.     ++ .....||  ..+.+.+..
T Consensus        61 ~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~---gIp-----Vl-RHs~kKP~ct~E~~~y~~  131 (190)
T KOG2961|consen   61 AIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKI---GIP-----VL-RHSVKKPACTAEEVEYHF  131 (190)
T ss_pred             ccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhh---CCc-----eE-eecccCCCccHHHHHHHh
Confidence            4667777777888764 3 669999997422       1111222 11   221     11 1122355  445566544


Q ss_pred             HHcCCCCCCcEEEEecCH-hhHHHHHHcCCcEEEEeCC
Q 009774          470 NSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       470 ~~l~~~~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~  506 (526)
                      ..-.+..+++++||||++ .||.-|...|-.+||+.++
T Consensus       132 ~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~g  169 (190)
T KOG2961|consen  132 GNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPG  169 (190)
T ss_pred             CCcccCChhHeEEEccchhhhHhhhhhccceeEEeccc
Confidence            433333399999999999 8999999999999999987

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=94.35  E-value=0.26  Score=46.60  Aligned_cols=94  Identities=16%  Similarity=-0.019  Sum_probs=53.5

Q ss_pred             CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccc----ccceEEeCCcCCCC-CHHHHHHHHHHcCCCCCCc
Q 009774          405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK----YLSGFFDTAVGNKR-ETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       405 pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~----~fd~i~~~~~~~KP-~p~~~~~~~~~l~~~~p~~  479 (526)
                      |--...|..+++  |...|++-+........-.++...|+.-    .|-.+.+... +|- ..+..+..-++++..  .-
T Consensus       137 pre~aaLa~~rE--yseti~~rs~d~~~~~~~~~L~e~glt~v~garf~~v~~as~-gKg~Aa~~ll~~y~rl~~~--r~  211 (274)
T COG3769         137 PREQAALAMLRE--YSETIIWRSSDERMAQFTARLNERGLTFVHGARFWHVLDASA-GKGQAANWLLETYRRLGGA--RT  211 (274)
T ss_pred             ChHHhHHHHHHH--hhhheeecccchHHHHHHHHHHhcCceEEeccceEEEecccc-CccHHHHHHHHHHHhcCce--eE
Confidence            334445555555  6778888777664444444443336652    2223333322 232 233444444555553  24


Q ss_pred             EEEEecCHhhHHHHHHcCCcEEEEe
Q 009774          480 ILFVTDVYQEATAAKAAGLEVVISI  504 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~aG~~~i~v~  504 (526)
                      ++-+||+++|+ .-...++.++.|.
T Consensus       212 t~~~GDg~nD~-Pl~ev~d~AfiV~  235 (274)
T COG3769         212 TLGLGDGPNDA-PLLEVMDYAFIVK  235 (274)
T ss_pred             EEecCCCCCcc-cHHHhhhhheeec
Confidence            89999999998 5667788777765

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=94.32  E-value=0.069  Score=61.96  Aligned_cols=94  Identities=14%  Similarity=0.151  Sum_probs=68.2

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEe-----------------C-CcCCCCCHH
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD-----------------T-AVGNKRETP  463 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~-----------------~-~~~~KP~p~  463 (526)
                      ++.|++.+.+++|++.|+++.++|+.+......+.+.+   |+..  +.++.                 . ....+=.|+
T Consensus       515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~l---GI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe  589 (867)
T TIGR01524       515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEV---GIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPM  589 (867)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc---CCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHH
Confidence            68899999999999999999999999999999999999   8852  11110                 0 111112233


Q ss_pred             HHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774          464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       464 ~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                      -=.++.+.+.-. .+.+.|+||..+|..+-++|.+-..
T Consensus       590 ~K~~iV~~lq~~-G~vVam~GDGvNDapALk~AdVGIA  626 (867)
T TIGR01524       590 QKSRIIGLLKKA-GHTVGFLGDGINDAPALRKADVGIS  626 (867)
T ss_pred             HHHHHHHHHHhC-CCEEEEECCCcccHHHHHhCCEEEE
Confidence            333444444443 5679999999999999999987644

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=94.20  E-value=0.13  Score=53.40  Aligned_cols=98  Identities=12%  Similarity=0.102  Sum_probs=79.5

Q ss_pred             ccCCC--HHHHHHHHHHCCCeEEEEeCc--hHHHHHHHHhhcCCCCcccccceEE-e-CCcCCCCCHHHHHHHHHHcCCC
Q 009774          402 EVFDD--VPEALEKWHSLGTKVYIYSSG--SRLAQRLIFGNSNYGDLRKYLSGFF-D-TAVGNKRETPSYVEITNSLGVD  475 (526)
Q Consensus       402 ~l~pg--v~~~L~~L~~~G~~l~vvTn~--~~~~~~~~l~~l~~~gl~~~fd~i~-~-~~~~~KP~p~~~~~~~~~l~~~  475 (526)
                      .|||.  ..++.+.+.+.|.++.++|..  |.+..+..+..+   |..-+=-.++ + .....|-.-..|..+++.-+++
T Consensus        97 vLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~---g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd  173 (635)
T COG5610          97 VLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSF---GPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVD  173 (635)
T ss_pred             EeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhc---CCCccCceeeecceeehhcccchHHHHHHhhcCCC
Confidence            56664  478999999999999999998  677788888887   6543222234 3 3455688889999999999998


Q ss_pred             CCCcEEEEecCH-hhHHHHHHcCCcEEEE
Q 009774          476 KPSEILFVTDVY-QEATAAKAAGLEVVIS  503 (526)
Q Consensus       476 ~p~~~l~VgDs~-~Di~~A~~aG~~~i~v  503 (526)
                       |...++|||+. .|+..+++.|+.|...
T Consensus       174 -~~~w~H~GDN~~aD~l~pk~LgI~Tlf~  201 (635)
T COG5610         174 -PKKWIHCGDNWVADYLKPKNLGISTLFY  201 (635)
T ss_pred             -hhheEEecCchhhhhcCccccchhHHHH
Confidence             99999999998 7999999999988765

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=93.95  E-value=0.081  Score=61.58  Aligned_cols=92  Identities=14%  Similarity=0.148  Sum_probs=68.9

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE------------------eCCcCCCCCHH
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------------------DTAVGNKRETP  463 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~------------------~~~~~~KP~p~  463 (526)
                      ++.|++.+++++|++.|+++.++|+-+......+.+.+   |+..  +.++                  ......+=.|+
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~l---GI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe  624 (903)
T PRK15122        550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREV---GLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPL  624 (903)
T ss_pred             ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHH
Confidence            68899999999999999999999999999999999999   8852  1111                  00111222344


Q ss_pred             HHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCc
Q 009774          464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLE  499 (526)
Q Consensus       464 ~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~  499 (526)
                      -=.++.+.+.-. .+-+.|+||..+|..+=++|-+-
T Consensus       625 ~K~~iV~~Lq~~-G~vVamtGDGvNDaPALk~ADVG  659 (903)
T PRK15122        625 QKSRVLKALQAN-GHTVGFLGDGINDAPALRDADVG  659 (903)
T ss_pred             HHHHHHHHHHhC-CCEEEEECCCchhHHHHHhCCEE
Confidence            444555555554 66799999999999999998775

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=93.88  E-value=0.066  Score=51.98  Aligned_cols=48  Identities=17%  Similarity=0.138  Sum_probs=41.2

Q ss_pred             eCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774          453 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       453 ~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                      +.....++++...+.+++++|++ +++|++|||+.+|+...+.+|....
T Consensus       152 ei~~~~~~K~~al~~l~~~~g~~-~~~~i~~GD~~nD~~ml~~~~~~ia  199 (236)
T TIGR02471       152 DVLPLRASKGLALRYLSYRWGLP-LEQILVAGDSGNDEEMLRGLTLGVV  199 (236)
T ss_pred             EEeeCCCChHHHHHHHHHHhCCC-HHHEEEEcCCccHHHHHcCCCcEEE
Confidence            33456678889999999999997 9999999999999999999886554

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=93.83  E-value=0.11  Score=61.07  Aligned_cols=95  Identities=15%  Similarity=0.053  Sum_probs=67.9

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE-----------------e-CCcCCCCCHH
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-----------------D-TAVGNKRETP  463 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~-----------------~-~~~~~KP~p~  463 (526)
                      ++.|++.+++++|++.|+++.++|+-+...+..+.+.+   |+.+.=..++                 . .....+=.|+
T Consensus       579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~---GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe  655 (941)
T TIGR01517       579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNC---GILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPL  655 (941)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHc---CCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHH
Confidence            68899999999999999999999999999999999999   7752111111                 0 0111122233


Q ss_pred             HHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 009774          464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV  500 (526)
Q Consensus       464 ~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~  500 (526)
                      -=..+.+.+.-. .+.+.|+||..+|..+=++|-+-.
T Consensus       656 ~K~~iV~~lq~~-g~vVam~GDGvNDapALk~AdVGI  691 (941)
T TIGR01517       656 DKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGF  691 (941)
T ss_pred             HHHHHHHHHHHC-CCEEEEECCCCchHHHHHhCCcce
Confidence            334444455444 567999999999999999987644

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=93.73  E-value=0.18  Score=56.65  Aligned_cols=83  Identities=19%  Similarity=0.251  Sum_probs=64.5

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeC-CcCCCCCHHHHHHHHHHcCCCCCCcE
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT-AVGNKRETPSYVEITNSLGVDKPSEI  480 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~-~~~~KP~p~~~~~~~~~l~~~~p~~~  480 (526)
                      ++.||+..++..||+.|++++++|+.+...++...+.+   |    ++.++.+ .+..|      ....+++.-. ...+
T Consensus       723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~V---G----i~~V~aev~P~~K------~~~Ik~lq~~-~~~V  788 (951)
T KOG0207|consen  723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQV---G----IDNVYAEVLPEQK------AEKIKEIQKN-GGPV  788 (951)
T ss_pred             ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhh---C----cceEEeccCchhh------HHHHHHHHhc-CCcE
Confidence            67899999999999999999999999999999999999   7    5666633 22222      2344455554 5689


Q ss_pred             EEEecCHhhHHHHHHcCC
Q 009774          481 LFVTDVYQEATAAKAAGL  498 (526)
Q Consensus       481 l~VgDs~~Di~~A~~aG~  498 (526)
                      .||||..+|--+-..|.+
T Consensus       789 aMVGDGINDaPALA~AdV  806 (951)
T KOG0207|consen  789 AMVGDGINDAPALAQADV  806 (951)
T ss_pred             EEEeCCCCccHHHHhhcc
Confidence            999999999866665544

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=93.59  E-value=0.15  Score=60.35  Aligned_cols=96  Identities=14%  Similarity=0.103  Sum_probs=69.7

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc---------c-eEEe--C---------------
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL---------S-GFFD--T---------------  454 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f---------d-~i~~--~---------------  454 (526)
                      ++.|++.++++.|++.|+++.++|+.+......+.+.+   |+.+..         + .+++  +               
T Consensus       646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~---Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~  722 (1053)
T TIGR01523       646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEV---GIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKAL  722 (1053)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc---CCCCccccccccccccceeeehHHhhhcCHHHHHHHhhc
Confidence            68899999999999999999999999999999999999   774310         1 1110  0               


Q ss_pred             -CcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774          455 -AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       455 -~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                       ....+=.|+-=..+.+.+.-. .+.+.|+||..+|..+-+.|.+-..
T Consensus       723 ~~V~ar~sP~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdVGIA  769 (1053)
T TIGR01523       723 CLVIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPSLKMANVGIA  769 (1053)
T ss_pred             CeEEEecCHHHHHHHHHHHHhc-CCeeEEeCCCcchHHHHHhCCccEe
Confidence             011222333334455555554 5679999999999999999987544

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=93.56  E-value=0.14  Score=50.80  Aligned_cols=39  Identities=13%  Similarity=0.017  Sum_probs=28.6

Q ss_pred             HHHHHHHcCCCCCCcEEEEecCHhhHHHHHHc---CCcEEEEe
Q 009774          465 YVEITNSLGVDKPSEILFVTDVYQEATAAKAA---GLEVVISI  504 (526)
Q Consensus       465 ~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~a---G~~~i~v~  504 (526)
                      ..++++.+++. .+++++|||+.+|+.+-+.+   |..+|.+.
T Consensus       179 l~~ll~~~~~~-~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg  220 (266)
T PRK10187        179 IAAFMQEAPFA-GRTPVFVGDDLTDEAGFAVVNRLGGISVKVG  220 (266)
T ss_pred             HHHHHHhcCCC-CCeEEEEcCCccHHHHHHHHHhcCCeEEEEC
Confidence            34456666776 78999999999998887777   44556553

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=92.92  E-value=0.41  Score=52.03  Aligned_cols=82  Identities=17%  Similarity=0.251  Sum_probs=65.1

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEE
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL  481 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l  481 (526)
                      ++.|++.++++.|++.|+++.++|..+......+-+.+   |+       +     ..=.|+--..+.+.+.-. ...+.
T Consensus       347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~l---gi-------~-----~~~~p~~K~~~v~~l~~~-g~~v~  410 (499)
T TIGR01494       347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKEL---GI-------F-----ARVTPEEKAALVEALQKK-GRVVA  410 (499)
T ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---Cc-------e-----eccCHHHHHHHHHHHHHC-CCEEE
Confidence            68899999999999999999999999999999999988   65       1     112333334555555443 56899


Q ss_pred             EEecCHhhHHHHHHcCCc
Q 009774          482 FVTDVYQEATAAKAAGLE  499 (526)
Q Consensus       482 ~VgDs~~Di~~A~~aG~~  499 (526)
                      ||||..+|..+-+.+++-
T Consensus       411 ~vGDg~nD~~al~~Advg  428 (499)
T TIGR01494       411 MTGDGVNDAPALKKADVG  428 (499)
T ss_pred             EECCChhhHHHHHhCCCc
Confidence            999999999998888754

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=92.02  E-value=0.2  Score=59.05  Aligned_cols=96  Identities=17%  Similarity=0.141  Sum_probs=69.0

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc------------------------ceEEe--C-
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL------------------------SGFFD--T-  454 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f------------------------d~i~~--~-  454 (526)
                      +|.|++.+.+++|+++|+++.++|+.+......+.+.+   |+.+--                        ..+++  + 
T Consensus       568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~---gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l  644 (997)
T TIGR01106       568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV---GIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDL  644 (997)
T ss_pred             CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCCCCCccchhhhhhhccccccccccccccceEEEhHHh
Confidence            67899999999999999999999999999999999988   663210                        01111  0 


Q ss_pred             -----------------CcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774          455 -----------------AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       455 -----------------~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                                       ....+-.|+-=..+.+.+.-. ..-+.|+||+.+|+.+-++|.+-..
T Consensus       645 ~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~~~GDG~ND~paLk~AdVGia  707 (997)
T TIGR01106       645 KDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVA  707 (997)
T ss_pred             hhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHhhCCccee
Confidence                             012233444444455555544 5679999999999999998887543

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=91.48  E-value=0.52  Score=49.56  Aligned_cols=85  Identities=11%  Similarity=0.158  Sum_probs=69.8

Q ss_pred             CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--e----CCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D----TAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       405 pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~----~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      -...+.+..|+++|+-++|+|-++...++..++..+        |.++  +    ....+-|+.+-.+++++++++- -+
T Consensus       258 k~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp--------~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg-~d  328 (574)
T COG3882         258 KTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP--------DMILKEEDFAVFQINWDPKAENIRKIAKKLNLG-LD  328 (574)
T ss_pred             HHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC--------CeEeeHhhhhhheecCCcchhhHHHHHHHhCCC-cc
Confidence            334478999999999999999999888887777762        3344  1    2456899999999999999997 99


Q ss_pred             cEEEEecCHhhHHHHHHcCC
Q 009774          479 EILFVTDVYQEATAAKAAGL  498 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~  498 (526)
                      ..+||+|++...+--++-+=
T Consensus       329 SmvFiDD~p~ErE~vk~~~~  348 (574)
T COG3882         329 SMVFIDDNPAERELVKRELP  348 (574)
T ss_pred             ceEEecCCHHHHHHHHhcCc
Confidence            99999999988877777764

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=89.97  E-value=0.43  Score=46.21  Aligned_cols=25  Identities=8%  Similarity=-0.061  Sum_probs=18.6

Q ss_pred             HHCCCeEEEEeCchHHHHHHHHhhc
Q 009774          415 HSLGTKVYIYSSGSRLAQRLIFGNS  439 (526)
Q Consensus       415 ~~~G~~l~vvTn~~~~~~~~~l~~l  439 (526)
                      +++|++++++|+.+...+..+++.+
T Consensus        27 ~~~gi~~viaTGR~~~~v~~~~~~l   51 (236)
T TIGR02471        27 SGDAVGFGIATGRSVESAKSRYAKL   51 (236)
T ss_pred             cCCCceEEEEeCCCHHHHHHHHHhC
Confidence            5567777777777777777777766

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>PLN03017 trehalose-phosphatase

Probab=89.48  E-value=0.59  Score=48.28  Aligned_cols=18  Identities=17%  Similarity=0.122  Sum_probs=13.7

Q ss_pred             cEEEEecCHhhHHHHHHc
Q 009774          479 EILFVTDVYQEATAAKAA  496 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~a  496 (526)
                      -.+||||...|-.+-+.+
T Consensus       304 ~pvyiGDD~TDEDaF~~L  321 (366)
T PLN03017        304 FPVYIGDDRTDEDAFKML  321 (366)
T ss_pred             eEEEeCCCCccHHHHHHH
Confidence            379999999877666655

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=89.47  E-value=1.3  Score=51.82  Aligned_cols=100  Identities=19%  Similarity=0.182  Sum_probs=73.1

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccc--eEEe-CC-----------------cCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS--GFFD-TA-----------------VGNKR  460 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd--~i~~-~~-----------------~~~KP  460 (526)
                      .+|.|++.++++.|++.|+++.++|+-+...+..+.+.+   |+...-+  .+++ ..                 ...+=
T Consensus       546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~---Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARv  622 (917)
T COG0474         546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKEC---GIEAEAESALVIDGAELDALSDEELAELVEELSVFARV  622 (917)
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHc---CCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEc
Confidence            378999999999999999999999999999999999999   7664432  1321 11                 11223


Q ss_pred             CHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEe
Q 009774          461 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISI  504 (526)
Q Consensus       461 ~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~  504 (526)
                      .|+.=.++.+.+.=. ..-+.|+||..||+-+=++|-+-.....
T Consensus       623 sP~qK~~IV~~lq~~-g~vVamtGDGvNDapALk~ADVGIamg~  665 (917)
T COG0474         623 SPEQKARIVEALQKS-GHVVAMTGDGVNDAPALKAADVGIAMGG  665 (917)
T ss_pred             CHHHHHHHHHHHHhC-CCEEEEeCCCchhHHHHHhcCccEEecc
Confidence            344334444555544 5679999999999999999987664443

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=89.02  E-value=0.73  Score=45.22  Aligned_cols=102  Identities=13%  Similarity=0.104  Sum_probs=64.4

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCch---HHHHHHHHhhcCCCCcccccceEEeCC-------cCCCCC-------HHH
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFGNSNYGDLRKYLSGFFDTA-------VGNKRE-------TPS  464 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~---~~~~~~~l~~l~~~gl~~~fd~i~~~~-------~~~KP~-------p~~  464 (526)
                      .++|++.++|++|+++|++++++||++   .......++.+   |+....+.++.+.       ...++.       .+.
T Consensus        17 ~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~---g~~~~~~~iit~~~~~~~~l~~~~~~~~v~~lg~~~   93 (249)
T TIGR01457        17 ERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASF---DIPATLETVFTASMATADYMNDLKLEKTVYVIGEEG   93 (249)
T ss_pred             eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc---CCCCChhhEeeHHHHHHHHHHhcCCCCEEEEEcChh
Confidence            477999999999999999999999944   55666778888   8876667777220       011121       123


Q ss_pred             HHHHHHHcCCC---CCCcEEEEecC----HhhHHHH---HHcCCcEEEEeCC
Q 009774          465 YVEITNSLGVD---KPSEILFVTDV----YQEATAA---KAAGLEVVISIRP  506 (526)
Q Consensus       465 ~~~~~~~l~~~---~p~~~l~VgDs----~~Di~~A---~~aG~~~i~v~~~  506 (526)
                      +...++..|+.   ...+.|+||..    +.++..|   .+.|+..+..+..
T Consensus        94 l~~~l~~~g~~~~~~~~~~Vvvg~~~~~~y~~l~~a~~~l~~g~~~i~tN~D  145 (249)
T TIGR01457        94 LKEAIKEAGYVEDKEKPDYVVVGLDRQIDYEKFATATLAIRKGAHFIGTNGD  145 (249)
T ss_pred             HHHHHHHcCCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCeEEEECCC
Confidence            55666776743   12356777743    2344333   2558885555543

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=88.99  E-value=1.2  Score=43.25  Aligned_cols=85  Identities=8%  Similarity=0.095  Sum_probs=50.9

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHH---HHHhh-cCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQR---LIFGN-SNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~---~~l~~-l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      .++|++.+.|+.|+++|+++.++||++.....   ..+.. +   |+.-..+.++.+      . ......+++.. . .
T Consensus        14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~---g~~~~~~~iits------~-~~~~~~l~~~~-~-~   81 (236)
T TIGR01460        14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLL---GVDVSPDQIITS------G-SVTKDLLRQRF-E-G   81 (236)
T ss_pred             ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhc---CCCCCHHHeeeH------H-HHHHHHHHHhC-C-C
Confidence            47899999999999999999999988733222   33333 5   665445555521      1 11222222221 2 3


Q ss_pred             CcEEEEecCHhhHHHHHHcCCc
Q 009774          478 SEILFVTDVYQEATAAKAAGLE  499 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~  499 (526)
                      ..++++|. ....+..+..|+.
T Consensus        82 ~~v~v~G~-~~~~~~l~~~g~~  102 (236)
T TIGR01460        82 EKVYVIGV-GELRESLEGLGFR  102 (236)
T ss_pred             CEEEEECC-HHHHHHHHHcCCc
Confidence            46777775 3444555666754

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=88.47  E-value=24  Score=33.83  Aligned_cols=38  Identities=8%  Similarity=-0.024  Sum_probs=31.9

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhc
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS  439 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l  439 (526)
                      .++.||+.++++.|.++ ++-+|+|.+-.++.++..+.+
T Consensus        82 a~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~i  119 (315)
T COG4030          82 AKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMI  119 (315)
T ss_pred             cccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhc
Confidence            46899999999999987 677788888888888887777

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=88.37  E-value=0.72  Score=45.54  Aligned_cols=44  Identities=18%  Similarity=0.376  Sum_probs=38.3

Q ss_pred             CCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774          458 NKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI  502 (526)
Q Consensus       458 ~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~  502 (526)
                      .-.+......+++.+|++ +++++.|||+.+|+..-+.+|...+.
T Consensus       194 gvsKg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~vAm  237 (270)
T PRK10513        194 RVNKGTGVKSLAEHLGIK-PEEVMAIGDQENDIAMIEYAGVGVAM  237 (270)
T ss_pred             CCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhCCceEEe
Confidence            344467899999999997 99999999999999999999985554

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=88.20  E-value=0.52  Score=46.49  Aligned_cols=48  Identities=10%  Similarity=0.059  Sum_probs=37.3

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHH---HHHHHhhcCCCCcccccceEE
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLA---QRLIFGNSNYGDLRKYLSGFF  452 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~---~~~~l~~l~~~gl~~~fd~i~  452 (526)
                      .++|++.++|++|+++|++++++||++...   ....++.+   |+.--.+.++
T Consensus        21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~---g~~~~~~~i~   71 (257)
T TIGR01458        21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRL---GFDISEDEVF   71 (257)
T ss_pred             CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHc---CCCCCHHHeE
Confidence            388999999999999999999999976553   45566666   7654445555

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR01658 EYA-cons_domain eyes absent protein conserved domain

Probab=88.19  E-value=1.7  Score=41.91  Aligned_cols=83  Identities=16%  Similarity=0.087  Sum_probs=63.7

Q ss_pred             CCeEEEEeCchHHHHHHHHhhcCCCCcccccc--eEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHH
Q 009774          418 GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS--GFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKA  495 (526)
Q Consensus       418 G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd--~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~  495 (526)
                      ++-=++||++.--..-.++=-+   +|.++|.  .|++....+|  ...|+++.+++|-. ...-++|||....-.+|+.
T Consensus       175 ~~vNvLVTs~qLVPaLaKcLLy---~L~~~f~ieNIYSa~kvGK--~~cFe~I~~Rfg~p-~~~f~~IGDG~eEe~aAk~  248 (274)
T TIGR01658       175 NCINVLVTSGQLIPSLAKCLLF---RLDTIFRIENVYSSIKVGK--LQCFKWIKERFGHP-KVRFCAIGDGWEECTAAQA  248 (274)
T ss_pred             ceeEEEEEcCccHHHHHHHHHh---ccCCccccccccchhhcch--HHHHHHHHHHhCCC-CceEEEeCCChhHHHHHHh
Confidence            3456788888766655555555   6666665  3555555556  58899999999995 8899999999999999999


Q ss_pred             cCCcEEEEeCC
Q 009774          496 AGLEVVISIRP  506 (526)
Q Consensus       496 aG~~~i~v~~~  506 (526)
                      .++.++-+...
T Consensus       249 l~wPFw~I~~h  259 (274)
T TIGR01658       249 MNWPFVKIDLH  259 (274)
T ss_pred             cCCCeEEeecC
Confidence            99999988754

This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.

>PLN02580 trehalose-phosphatase

Probab=88.19  E-value=0.8  Score=47.71  Aligned_cols=35  Identities=20%  Similarity=0.096  Sum_probs=27.9

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhh
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN  438 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~  438 (526)
                      +-|++.++|+.|.+. .+++|||+.+.+.++..+.-
T Consensus       142 ~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l~~  176 (384)
T PLN02580        142 MSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELVGL  176 (384)
T ss_pred             CCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHhCC
Confidence            457788888888887 58999999998888777653

>PRK10976 putative hydrolase; Provisional

Probab=87.95  E-value=0.54  Score=46.36  Aligned_cols=15  Identities=20%  Similarity=0.313  Sum_probs=9.0

Q ss_pred             ceEEEEecccccccc
Q 009774          284 PRCIVLDIEGTTTPI  298 (526)
Q Consensus       284 ikaVlFD~DGTL~d~  298 (526)
                      +|.|+|||||||++.
T Consensus         2 ikli~~DlDGTLl~~   16 (266)
T PRK10976          2 YQVVASDLDGTLLSP   16 (266)
T ss_pred             ceEEEEeCCCCCcCC
Confidence            566666666666654

>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice

Probab=87.58  E-value=2.9  Score=40.68  Aligned_cols=92  Identities=13%  Similarity=0.129  Sum_probs=53.0

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcc-cccceEE-----eCC----cCCCCCHHHHHH--
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KYLSGFF-----DTA----VGNKRETPSYVE--  467 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~-~~fd~i~-----~~~----~~~KP~p~~~~~--  467 (526)
                      .+.+.+|+.++++.|+++++|+.|+|.+-.+.+...+++.   +.. +-+..+-     ++.    +..-|---.|.+  
T Consensus        88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~---~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~  164 (246)
T PF05822_consen   88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQA---GVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNE  164 (246)
T ss_dssp             ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHT---T--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHH
T ss_pred             chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHc---CCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCc
Confidence            4579999999999999999999999999999999999887   432 2211111     211    111121111222  


Q ss_pred             -HH------HHcCCCCCCcEEEEecCHhhHHHHHHc
Q 009774          468 -IT------NSLGVDKPSEILFVTDVYQEATAAKAA  496 (526)
Q Consensus       468 -~~------~~l~~~~p~~~l~VgDs~~Di~~A~~a  496 (526)
                       ++      +.  +..-.+++..|||..|+..|..+
T Consensus       165 ~~l~~~~~~~~--~~~R~NvlLlGDslgD~~Ma~G~  198 (246)
T PF05822_consen  165 SALEDSPYFKQ--LKKRTNVLLLGDSLGDLHMADGV  198 (246)
T ss_dssp             HHHTTHHHHHC--TTT--EEEEEESSSGGGGTTTT-
T ss_pred             ccccCchHHHH--hccCCcEEEecCccCChHhhcCC
Confidence             11      22  22256899999999999988766

The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.

>PLN02151 trehalose-phosphatase

Probab=87.56  E-value=0.91  Score=46.72  Aligned_cols=14  Identities=43%  Similarity=0.757  Sum_probs=11.9

Q ss_pred             eEEEEecccccccc
Q 009774          285 RCIVLDIEGTTTPI  298 (526)
Q Consensus       285 kaVlFD~DGTL~d~  298 (526)
                      .+++||+||||++.
T Consensus        99 ~ll~lDyDGTL~PI  112 (354)
T PLN02151         99 IVMFLDYDGTLSPI  112 (354)
T ss_pred             eEEEEecCccCCCC
Confidence            58899999999863

>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=87.49  E-value=0.85  Score=47.01  Aligned_cols=102  Identities=15%  Similarity=0.138  Sum_probs=76.8

Q ss_pred             CCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE-eC----------------------------
Q 009774          404 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DT----------------------------  454 (526)
Q Consensus       404 ~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~-~~----------------------------  454 (526)
                      .+-.+..|..+|+.|.++.++||+.-.+....+..+-..++..+||.++ ..                            
T Consensus       200 d~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~  279 (424)
T KOG2469|consen  200 DGTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNT  279 (424)
T ss_pred             cCccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccC
Confidence            3445559999999999999999999888887777663337888888776 21                            


Q ss_pred             ---CcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCH-hhHH-HHHHcCCcEEEEeCC
Q 009774          455 ---AVGNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEAT-AAKAAGLEVVISIRP  506 (526)
Q Consensus       455 ---~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~-~Di~-~A~~aG~~~i~v~~~  506 (526)
                         ..+.++.+..-..+++.+++. ..+++||||+. .||- .-+.-|.+++++...
T Consensus       280 ~p~e~~~~ySggs~~~~~~~l~~~-g~diLy~gdHi~~dvl~skk~~~wrt~lv~pe  335 (424)
T KOG2469|consen  280 GPLEQGGVYSGGSLKTVETSMKVK-GKDILYGGDHIWGDVLVSKKRRGWRTVLVAPE  335 (424)
T ss_pred             CcchhcccCCcchHHHHHHHhccc-ccceeecccceeeeEEecceecceEEEEEehh
Confidence               012244556778899999997 99999999998 5654 445668888888764

>PLN02499 glycerol-3-phosphate acyltransferase

Probab=87.30  E-value=3  Score=44.71  Aligned_cols=28  Identities=14%  Similarity=0.082  Sum_probs=24.7

Q ss_pred             HHHHHHHCCCeEEEEeCchHHHHHHHHhh
Q 009774          410 ALEKWHSLGTKVYIYSSGSRLAQRLIFGN  438 (526)
Q Consensus       410 ~L~~L~~~G~~l~vvTn~~~~~~~~~l~~  438 (526)
                      .++..+..| +++|+|.+++..++..++.
T Consensus       101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake  128 (498)
T PLN02499        101 AWKVFSSCD-KRVVVTRMPRVMVERFAKE  128 (498)
T ss_pred             HHHHHHcCC-eEEEEeCCHHHHHHHHHHH
Confidence            566667788 9999999999999999998

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=87.10  E-value=1.7  Score=42.66  Aligned_cols=13  Identities=31%  Similarity=0.411  Sum_probs=8.9

Q ss_pred             EEEeccccccccc
Q 009774          287 IVLDIEGTTTPIS  299 (526)
Q Consensus       287 VlFD~DGTL~d~~  299 (526)
                      |+|||||||++..
T Consensus         2 i~~DlDGTll~~~   14 (256)
T TIGR01486         2 IFTDLDGTLLDPH   14 (256)
T ss_pred             EEEcCCCCCcCCC
Confidence            6677777777654

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=87.03  E-value=3.2  Score=49.54  Aligned_cols=41  Identities=7%  Similarity=0.134  Sum_probs=38.2

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcc
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR  445 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~  445 (526)
                      ++.|++.++++.|++.|+++.++|+.+...+..+.+.+   |+.
T Consensus       656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~---gii  696 (1054)
T TIGR01657       656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVAREC---GIV  696 (1054)
T ss_pred             CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCC
Confidence            68899999999999999999999999999999999988   774

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>PRK10444 UMP phosphatase; Provisional

Probab=86.74  E-value=0.56  Score=46.04  Aligned_cols=105  Identities=10%  Similarity=0.086  Sum_probs=59.9

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCC------cCCCC-------CHHHHHHH
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTA------VGNKR-------ETPSYVEI  468 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~------~~~KP-------~p~~~~~~  468 (526)
                      .++|++.++|++|+++|.++.++||++........+++...|+.---+.++.+.      ...++       -...+...
T Consensus        17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~~L~~~~~~~v~~~g~~~l~~~   96 (248)
T PRK10444         17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVIGEGALIHE   96 (248)
T ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHHHHHHHHHHhCCCCEEEEEcCHHHHHH
Confidence            488999999999999999999999998754444444332227643344555210      00011       11223444


Q ss_pred             HHHcCCC---CCCcEEEEecCHh----hHHHHH---HcCCcEEEEeCC
Q 009774          469 TNSLGVD---KPSEILFVTDVYQ----EATAAK---AAGLEVVISIRP  506 (526)
Q Consensus       469 ~~~l~~~---~p~~~l~VgDs~~----Di~~A~---~aG~~~i~v~~~  506 (526)
                      ++..|+.   +..++++||...+    .+..|.   +.|...+..+..
T Consensus        97 l~~~g~~~~~~~~~~Vvvg~~~~~~~~~l~~a~~~l~~g~~~i~~n~D  144 (248)
T PRK10444         97 LYKAGFTITDINPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD  144 (248)
T ss_pred             HHHCcCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC
Confidence            5554542   1336788886542    222232   447777766543

>KOG1618 consensus Predicted phosphatase [General function prediction only]

Probab=86.51  E-value=1.9  Score=43.17  Aligned_cols=86  Identities=12%  Similarity=0.094  Sum_probs=51.4

Q ss_pred             cCCCHHHHHHHHHHC----CCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCC-cCCCCCHHHHHHHHHHcCCC
Q 009774          403 VFDDVPEALEKWHSL----GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTA-VGNKRETPSYVEITNSLGVD  475 (526)
Q Consensus       403 l~pgv~~~L~~L~~~----G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~-~~~KP~p~~~~~~~~~l~~~  475 (526)
                      +.|++.+.|+.|.+.    .++..++||+.--......+.+     +...+.-+  +++ ...-|    |+... +  ..
T Consensus        52 ~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~l-----S~~Lgv~Vs~dqviqSHsP----~r~l~-~--~~  119 (389)
T KOG1618|consen   52 PIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQEL-----SALLGVEVSADQVIQSHSP----FRLLV-E--YH  119 (389)
T ss_pred             CCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHH-----HHhhCCccCHHHHHhhcCh----HHHHh-h--hh
Confidence            557788888888877    7999999999644333333322     22222222  221 12222    44443 3  33


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774          476 KPSEILFVTDVYQEATAAKAAGLEVVI  502 (526)
Q Consensus       476 ~p~~~l~VgDs~~Di~~A~~aG~~~i~  502 (526)
                       -++++.+|+. +-.+.|...|.+.|.
T Consensus       120 -~k~vLv~G~~-~vr~vAegyGFk~Vv  144 (389)
T KOG1618|consen  120 -YKRVLVVGQG-SVREVAEGYGFKNVV  144 (389)
T ss_pred             -hceEEEecCC-cHHHHhhccCcccee
Confidence             5599999964 445678889997664

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=86.36  E-value=1.1  Score=50.99  Aligned_cols=24  Identities=13%  Similarity=-0.061  Sum_probs=20.3

Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCC
Q 009774          474 VDKPSEILFVTDVYQEATAAKAAGL  498 (526)
Q Consensus       474 ~~~p~~~l~VgDs~~Di~~A~~aG~  498 (526)
                      ++ ++.++++||+.+|...-+.++.
T Consensus       669 ~~-~d~vl~~GD~~nDe~Mf~~~~~  692 (726)
T PRK14501        669 GP-YDFVLAIGDDTTDEDMFRALPE  692 (726)
T ss_pred             CC-CCEEEEECCCCChHHHHHhccc
Confidence            44 6799999999999999998753

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]

Probab=85.18  E-value=2.7  Score=47.34  Aligned_cols=95  Identities=17%  Similarity=0.174  Sum_probs=72.8

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccce----EE-----eCC-------------cCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSG----FF-----DTA-------------VGNK  459 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~----i~-----~~~-------------~~~K  459 (526)
                      +|.|++.+.++.+++.|+++.++|+.+...+..+.++.   |+...=+.    .+     |+.             ...+
T Consensus       584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~i---Gi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR  660 (972)
T KOG0202|consen  584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREI---GIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFAR  660 (972)
T ss_pred             CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHh---CCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEe
Confidence            68999999999999999999999999999999999999   66543331    11     110             0123


Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 009774          460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV  500 (526)
Q Consensus       460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~  500 (526)
                      -.|+.=.++.+.|.-. .+=+.|-||..+|.-+-+.|.+-.
T Consensus       661 ~~P~HK~kIVeaLq~~-geivAMTGDGVNDApALK~AdIGI  700 (972)
T KOG0202|consen  661 AEPQHKLKIVEALQSR-GEVVAMTGDGVNDAPALKKADIGI  700 (972)
T ss_pred             cCchhHHHHHHHHHhc-CCEEEecCCCccchhhhhhcccce
Confidence            3555566777777775 778999999999999999887643

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=84.98  E-value=1  Score=43.45  Aligned_cols=43  Identities=9%  Similarity=0.036  Sum_probs=33.1

Q ss_pred             cCCCCCHHHHHHHHHHcC--CCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774          456 VGNKRETPSYVEITNSLG--VDKPSEILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       456 ~~~KP~p~~~~~~~~~l~--~~~p~~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                      ...|+..  ...+++.++  ++ +++|++|||+.+|+...+.+|+..+
T Consensus       179 ~~sK~~a--l~~l~~~~~~~~~-~~~~i~~GD~~nD~~ml~~ag~~v~  223 (225)
T TIGR02461       179 GSDKGKA--IKRLLDLYKLRPG-AIESVGLGDSENDFPMFEVVDLAFL  223 (225)
T ss_pred             CCCHHHH--HHHHHHHhccccC-cccEEEEcCCHHHHHHHHhCCCcEe
Confidence            4556544  555666665  46 7899999999999999999998654

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=84.89  E-value=1.8  Score=42.80  Aligned_cols=17  Identities=41%  Similarity=0.507  Sum_probs=14.1

Q ss_pred             CceEEEEeccccccccc
Q 009774          283 FPRCIVLDIEGTTTPIS  299 (526)
Q Consensus       283 ~ikaVlFD~DGTL~d~~  299 (526)
                      .-++++||+||||.+..
T Consensus        17 ~~~~~~lDyDGTl~~i~   33 (266)
T COG1877          17 RKRLLFLDYDGTLTEIV   33 (266)
T ss_pred             cceEEEEeccccccccc
Confidence            45799999999998743

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=84.71  E-value=1.5  Score=50.75  Aligned_cols=27  Identities=15%  Similarity=0.183  Sum_probs=22.6

Q ss_pred             HHcCCCCCCcEEEEecCHhhHHHHHHcC
Q 009774          470 NSLGVDKPSEILFVTDVYQEATAAKAAG  497 (526)
Q Consensus       470 ~~l~~~~p~~~l~VgDs~~Di~~A~~aG  497 (526)
                      +.+|.. ++.+++|||+.+|..+-+.++
T Consensus       775 ~~~g~~-~d~vl~~GDD~nDedMF~~~~  801 (854)
T PLN02205        775 QERGML-PDFVLCIGDDRSDEDMFEVIT  801 (854)
T ss_pred             HhcCCC-cccEEEEcCCccHHHHHHHhh
Confidence            345886 999999999999998887775

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=84.50  E-value=1.4  Score=42.35  Aligned_cols=13  Identities=31%  Similarity=0.424  Sum_probs=11.1

Q ss_pred             EEEeccccccccc
Q 009774          287 IVLDIEGTTTPIS  299 (526)
Q Consensus       287 VlFD~DGTL~d~~  299 (526)
                      |+||+||||++..
T Consensus         1 i~~DlDGTLl~~~   13 (254)
T PF08282_consen    1 IFSDLDGTLLNSD   13 (254)
T ss_dssp             EEEECCTTTCSTT
T ss_pred             cEEEECCceecCC
Confidence            7899999999854

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=84.35  E-value=2.9  Score=41.67  Aligned_cols=93  Identities=13%  Similarity=0.074  Sum_probs=57.6

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHH---HhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLI---FGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~---l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      .+.||+.+.|+.|++.|.++.++||++...-+..   ++.+   |+..     +......-|.-.+..++-++. .. .+
T Consensus        38 ~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~l---G~~~-----v~e~~i~ssa~~~a~ylk~~~-~~-~k  107 (306)
T KOG2882|consen   38 KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKL---GFNS-----VKEENIFSSAYAIADYLKKRK-PF-GK  107 (306)
T ss_pred             CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHh---Cccc-----cCcccccChHHHHHHHHHHhC-cC-CC
Confidence            5889999999999999999999999976544444   4455   5442     111111233333444443333 43 67


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEEEEeC
Q 009774          479 EILFVTDVYQEATAAKAAGLEVVISIR  505 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i~v~~  505 (526)
                      .++.+|-.. =-+..+++|+.......
T Consensus       108 ~Vyvig~~g-i~~eL~~aG~~~~g~~~  133 (306)
T KOG2882|consen  108 KVYVIGEEG-IREELDEAGFEYFGGGP  133 (306)
T ss_pred             eEEEecchh-hhHHHHHcCceeecCCC
Confidence            888888543 12345677876665443

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=83.79  E-value=1.2  Score=44.13  Aligned_cols=17  Identities=24%  Similarity=0.360  Sum_probs=13.1

Q ss_pred             CceEEEEeccccccccc
Q 009774          283 FPRCIVLDIEGTTTPIS  299 (526)
Q Consensus       283 ~ikaVlFD~DGTL~d~~  299 (526)
                      |+|.|+|||||||++..
T Consensus         1 m~kli~~DlDGTLl~~~   17 (272)
T PRK15126          1 MARLAAFDMDGTLLMPD   17 (272)
T ss_pred             CccEEEEeCCCcCcCCC
Confidence            47888888888888753

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=83.49  E-value=1.5  Score=43.51  Aligned_cols=43  Identities=14%  Similarity=0.153  Sum_probs=37.9

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL  448 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f  448 (526)
                      ..|.+.++|++|+++|++++++|+.+...+...++.+   ++..+|
T Consensus        22 ~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l---~l~~~~   64 (273)
T PRK00192         22 SYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKEL---GLEDPF   64 (273)
T ss_pred             CcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc---CCCCCE
Confidence            5578899999999999999999999999999999998   776543

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=83.48  E-value=4.9  Score=37.86  Aligned_cols=87  Identities=14%  Similarity=0.038  Sum_probs=56.3

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccc--cc--eEEeCC----------c--CCCCCHHHHH
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY--LS--GFFDTA----------V--GNKRETPSYV  466 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~--fd--~i~~~~----------~--~~KP~p~~~~  466 (526)
                      ..|++.++|+.+.+ .|.++|.|.+....++.+++.+   ++...  +.  .+.+..          +  ..|+-.    
T Consensus        46 kRP~l~eFL~~~~~-~feIvVwTAa~~~ya~~~l~~l---~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~----  117 (195)
T TIGR02245        46 MRPYLHEFLTSAYE-DYDIVIWSATSMKWIEIKMTEL---GVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLG----  117 (195)
T ss_pred             eCCCHHHHHHHHHh-CCEEEEEecCCHHHHHHHHHHh---cccCCccceEEEEeccccceeeEeeccCcEEEeecH----
Confidence            45999999999998 5999999999999999999987   44211  11  111211          1  134422    


Q ss_pred             HHHHHcC--CCCCCcEEEEecCHhhHHHHHHcCC
Q 009774          467 EITNSLG--VDKPSEILFVTDVYQEATAAKAAGL  498 (526)
Q Consensus       467 ~~~~~l~--~~~p~~~l~VgDs~~Di~~A~~aG~  498 (526)
                      .+-..++  .+ .+++++|+|++.-...--..|+
T Consensus       118 ~lw~~l~~~~~-~~ntiiVDd~p~~~~~~P~N~i  150 (195)
T TIGR02245       118 VIWALLPEFYS-MKNTIMFDDLRRNFLMNPQNGL  150 (195)
T ss_pred             HhhhhcccCCC-cccEEEEeCCHHHHhcCCCCcc
Confidence            2222443  35 7899999999965433333344

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]

Probab=83.40  E-value=2.9  Score=39.00  Aligned_cols=89  Identities=18%  Similarity=0.169  Sum_probs=0.0

Q ss_pred             CCCCCceEEEEeccccccccccccccchhhHHhhHHhhhhhhcCChhhHHHHHHHHHHhHHhhhhccCCccCCCCCCCch
Q 009774          279 GSGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGK  358 (526)
Q Consensus       279 ~~~~~ikaVlFD~DGTL~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (526)
                      ..++.--.++||+||||.....                                                          
T Consensus         6 ~~r~~~~l~lfdvdgtLt~~r~----------------------------------------------------------   27 (252)
T KOG3189|consen    6 AARDEETLCLFDVDGTLTPPRQ----------------------------------------------------------   27 (252)
T ss_pred             hhcCCceEEEEecCCccccccc----------------------------------------------------------


Q ss_pred             HHHHHHHHHHHHHHHhhhhcchhhHhhhHHHHHHhhhcccccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhh
Q 009774          359 EEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN  438 (526)
Q Consensus       359 ~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~  438 (526)
                                                                 ...|.+.++|+.||+. +.+++|-.+.-..+..-+ -
T Consensus        28 -------------------------------------------~~~~e~~~~l~~lr~~-v~ig~VggsDl~k~~eql-G   62 (252)
T KOG3189|consen   28 -------------------------------------------KVTPEMLEFLQKLRKK-VTIGFVGGSDLSKQQEQL-G   62 (252)
T ss_pred             -------------------------------------------cCCHHHHHHHHHHhhh-eEEEEeecHHHHHHHHHh-c


Q ss_pred             cCCCCcccccceEE-eC--CcCCCCCHHHHHHHHHHcC
Q 009774          439 SNYGDLRKYLSGFF-DT--AVGNKRETPSYVEITNSLG  473 (526)
Q Consensus       439 l~~~gl~~~fd~i~-~~--~~~~KP~p~~~~~~~~~l~  473 (526)
                      -   .+.+.||.++ ++  +...--.+..-+.+...+|
T Consensus        63 ~---~Vl~~fDY~F~ENGl~~yk~gk~~~~Qsi~~~LG   97 (252)
T KOG3189|consen   63 D---NVLEEFDYVFSENGLVAYKGGKLLSKQSIINHLG   97 (252)
T ss_pred             h---hHHhhhcccccCCCeeEeeCCcchhHHHHHHHHh

>PLN02887 hydrolase family protein

Probab=83.36  E-value=3.5  Score=45.56  Aligned_cols=32  Identities=13%  Similarity=0.003  Sum_probs=21.6

Q ss_pred             CCceEEEEeccccccccccccccchhhHHhhHHhh
Q 009774          282 LFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKH  316 (526)
Q Consensus       282 ~~ikaVlFD~DGTL~d~~~~~~~~~~~~~~~~~~~  316 (526)
                      +++|.|+|||||||++...   .+-+...+.+..+
T Consensus       306 ~~iKLIa~DLDGTLLn~d~---~Is~~t~eAI~kl  337 (580)
T PLN02887        306 PKFSYIFCDMDGTLLNSKS---QISETNAKALKEA  337 (580)
T ss_pred             cCccEEEEeCCCCCCCCCC---ccCHHHHHHHHHH
Confidence            5799999999999998642   2333444444443

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=82.40  E-value=2.9  Score=41.40  Aligned_cols=20  Identities=30%  Similarity=0.208  Sum_probs=14.9

Q ss_pred             CCCCceEEEEeccccccccc
Q 009774          280 SGLFPRCIVLDIEGTTTPIS  299 (526)
Q Consensus       280 ~~~~ikaVlFD~DGTL~d~~  299 (526)
                      +...++.|++||||||++..
T Consensus         3 ~~~~~~lI~~DlDGTLL~~~   22 (271)
T PRK03669          3 SLQDPLLIFTDLDGTLLDSH   22 (271)
T ss_pred             CcCCCeEEEEeCccCCcCCC
Confidence            45677888888888888753

>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3

Probab=81.85  E-value=7.1  Score=38.20  Aligned_cols=76  Identities=9%  Similarity=-0.046  Sum_probs=51.0

Q ss_pred             CCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHc
Q 009774          417 LGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAA  496 (526)
Q Consensus       417 ~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~a  496 (526)
                      .-+++++||..+.....+.++.|.  .|.-.+|..+--.+..|      -.+|+.++-.     +|++|...-++.|. .
T Consensus       185 ~piRtalVTAR~apah~RvI~TLr--~Wgv~vDEafFLgG~~K------~~vL~~~~ph-----IFFDDQ~~H~~~a~-~  250 (264)
T PF06189_consen  185 SPIRTALVTARSAPAHERVIRTLR--SWGVRVDEAFFLGGLPK------GPVLKAFRPH-----IFFDDQDGHLESAS-K  250 (264)
T ss_pred             CceEEEEEEcCCCchhHHHHHHHH--HcCCcHhHHHHhCCCch------hHHHHhhCCC-----EeecCchhhhhHhh-c
Confidence            458899999988777777877762  22222333221112223      2355566655     89999999999998 8


Q ss_pred             CCcEEEEeCC
Q 009774          497 GLEVVISIRP  506 (526)
Q Consensus       497 G~~~i~v~~~  506 (526)
                      ++.++.|.++
T Consensus       251 ~vps~hVP~g  260 (264)
T PF06189_consen  251 VVPSGHVPYG  260 (264)
T ss_pred             CCCEEeccCC
Confidence            8899998876

1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm

>KOG3128 consensus Uncharacterized conserved protein [Function unknown]

Probab=80.95  E-value=3.2  Score=40.26  Aligned_cols=93  Identities=11%  Similarity=0.066  Sum_probs=58.2

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE------eC----CcCCCCCHHHH-----
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------DT----AVGNKRETPSY-----  465 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~------~~----~~~~KP~p~~~-----  465 (526)
                      +.+.+|..++++.|+++++|+.|.|.+-....+..++...  ++.+ +..++      +.    .+..+|-...|     
T Consensus       137 i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~--~~~p-n~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~  213 (298)
T KOG3128|consen  137 IALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKL--VLHP-NVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSS  213 (298)
T ss_pred             HHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHh--ccCc-cHHhhhhhhhhcccchhhhhhHHHHHHHccchH
Confidence            3577899999999999999999999998777776666542  2222 22222      11    11223322222     


Q ss_pred             --HHHHHHcCC-CCCCcEEEEecCHhhHHHHHHc
Q 009774          466 --VEITNSLGV-DKPSEILFVTDVYQEATAAKAA  496 (526)
Q Consensus       466 --~~~~~~l~~-~~p~~~l~VgDs~~Di~~A~~a  496 (526)
                        +...+.+.. +....+++.|||..|+..|-.+
T Consensus       214 v~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv  247 (298)
T KOG3128|consen  214 VLQNESEYFHQLAGRVNVILLGDSIGDLHMADGV  247 (298)
T ss_pred             HHHhhhHHHhhccCCceEEEeccccccchhhcCC
Confidence              222333332 1257899999999999887654

>COG4850 Uncharacterized conserved protein [Function unknown]

Probab=80.67  E-value=8.3  Score=38.81  Aligned_cols=87  Identities=17%  Similarity=0.186  Sum_probs=58.3

Q ss_pred             ccCCCHHHHHHHHHHCC-CeEEEEeCchHHHHHHHHhh-----cCCCCcc-----cccceEEeCCcCCCCCHHHHHHHHH
Q 009774          402 EVFDDVPEALEKWHSLG-TKVYIYSSGSRLAQRLIFGN-----SNYGDLR-----KYLSGFFDTAVGNKRETPSYVEITN  470 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G-~~l~vvTn~~~~~~~~~l~~-----l~~~gl~-----~~fd~i~~~~~~~KP~p~~~~~~~~  470 (526)
                      +++|||....+.|.+.| .++.-+||++......+-+.     ++.+.+.     ..||.++.+....|-.  ....++.
T Consensus       196 ~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sga~rK~~--~l~nil~  273 (373)
T COG4850         196 QVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIESGAARKGQ--SLRNILR  273 (373)
T ss_pred             CCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCCCchhHhhcCCcccccccchhhhccc--HHHHHHH
Confidence            69999999999999987 89999999997754433222     2222211     2345555444445543  3555777


Q ss_pred             HcCCCCCCcEEEEecCH-hhHHHH
Q 009774          471 SLGVDKPSEILFVTDVY-QEATAA  493 (526)
Q Consensus       471 ~l~~~~p~~~l~VgDs~-~Di~~A  493 (526)
                      ++.=.   +.+.||||- .|.+.-
T Consensus       274 ~~p~~---kfvLVGDsGE~DpeIY  294 (373)
T COG4850         274 RYPDR---KFVLVGDSGEHDPEIY  294 (373)
T ss_pred             hCCCc---eEEEecCCCCcCHHHH
Confidence            77554   899999997 776643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	526
1yns_A	261	Crystal Structure Of Human Enolase-Phosphatase E1 A		2e-56
1zs9_A	261	Crystal Structure Of Human Enolase-Phosphatase E1 L		4e-55
2g80_A	253	Crystal Structure Of Utr4 Protein (Unknown Transcri		8e-28
2irp_A	208	Crystal Structure Of The L-fuculose-1-phosphate Ald		4e-10
1e46_P	215	L-Fuculose 1-Phosphate Aldolase From Escherichia Co		5e-04
1e47_P	215	L-Fuculose 1-Phosphate Aldolase From Escherichia Co		8e-04
1e48_P	215	L-Fuculose 1-Phosphate Aldolase From Escherichia Co		8e-04

>pdb|1YNS|A Chain A, Crystal Structure Of Human Enolase-Phosphatase E1 And Its Complex With A Substrate Analog Length = 261

Iteration: 1
 Score =  217 bits (552), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 113/246 (45%), Positives = 160/246 (65%), Gaps = 9/246 (3%)
Query: 287 IVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVA 346
           I+LDIEGTTTPI+FV ++LFPY  +NV ++L   ++  E Q D+ LLR Q E+D    + 
Sbjct: 13  ILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDAH--LD 70
Query: 347 GAVPIPPGDAGK----EEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGE 402
           GAVPIP          +++I A+V NV   +  DRK TALKQLQGH+WR  F +  ++ E
Sbjct: 71  GAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMKAE 130
Query: 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRET 462
            F DV  A+ KW   G KVYIYSSGS  AQ+L+FG+S  GD+ + + G FDT +G+K E+
Sbjct: 131 FFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVES 190
Query: 463 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG--FKTI 520
            SY +I +S+G    + ILF+TDV +EA+AA+ A + V + +RPGN  L ++    +  I
Sbjct: 191 ESYRKIADSIGC-STNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 249
Query: 521 NSFAEI 526
            SF+E+
Sbjct: 250 TSFSEL 255

>pdb|1ZS9|A Chain A, Crystal Structure Of Human Enolase-Phosphatase E1 Length = 261

Iteration: 1
 Score =  212 bits (540), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 113/246 (45%), Positives = 156/246 (63%), Gaps = 9/246 (3%)
Query: 287 IVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVA 346
           I+LDIEGTTTPI+FV ++LFPY  +NV ++L   ++  E Q D+ LLR Q E+D    + 
Sbjct: 13  ILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDAH--LD 70
Query: 347 GAVPIPPGDAGK----EEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGE 402
           GAVPIP          ++ I A+V NV      DRK TALKQLQGH WR  F +   + E
Sbjct: 71  GAVPIPAASGNGVDDLQQXIQAVVDNVCWQXSLDRKTTALKQLQGHXWRAAFTAGRXKAE 130
Query: 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRET 462
            F DV  A+ KW   G KVYIYSSGS  AQ+L+FG+S  GD+ + + G FDT +G+K E+
Sbjct: 131 FFADVVPAVRKWREAGXKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVES 190
Query: 463 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG--FKTI 520
            SY +I +S+G    + ILF+TDV +EA+AA+ A + V + +RPGN  L ++    +  I
Sbjct: 191 ESYRKIADSIGC-STNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 249
Query: 521 NSFAEI 526
            SF+E+
Sbjct: 250 TSFSEL 255

>pdb|2G80|A Chain A, Crystal Structure Of Utr4 Protein (Unknown Transcript 4 Protein) (Yel038w) From Saccharomyces Cerevisiae At 2.28 A Resolution Length = 253

Iteration: 1
 Score =  121 bits (304), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 125/245 (51%), Gaps = 38/245 (15%)
Query: 288 VLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAG 347
           +LDIEGT  PISFV E LFPY  + V +   V  DT ++   +  + SQ   D K+    
Sbjct: 35  LLDIEGTVCPISFVKETLFPYFTNKVPQL--VQQDTRDSP--VSNILSQFHIDNKE---- 86
Query: 348 AVPIPPGDAGKEEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDV 407
                            L A++  ++  D K   LKQLQG++W  G+ES +++  V+ D 
Sbjct: 87  ----------------QLQAHILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADA 130
Query: 408 PEALEKWHSLGTKVYIYSSGSRLAQRLIFG--------NSNYGDLRKYLSGFFD-TAVGN 458
            + +++      +V+IYSSGS  AQ+L+FG          +  DL  Y+ G+FD    G 
Sbjct: 131 IDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGK 186
Query: 459 KRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFK 518
           K ET SY  I   +G  K SE+LF++D   E  AA   G+   ++ RPGN P+P+   ++
Sbjct: 187 KTETQSYANILRDIGA-KASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQ 245
Query: 519 TINSF 523
              +F
Sbjct: 246 VYKNF 250

>pdb|2IRP|A Chain A, Crystal Structure Of The L-fuculose-1-phosphate Aldolase (aq_1979) From Aquifex Aeolicus Vf5 Length = 208

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 34  ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN 93
           I E  R  ++ GWV  T G+I+ KV        ++ I ++ SG  K ++ PED+ ++   
Sbjct: 16  IIEAGRILHSRGWVPATSGNISAKV-------SEEYIAITASGKHKGKLTPEDILLIDYE 68
Query: 94  GTTLXXXXXXXXXXXXXXCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEF- 152
           G  +                   P         +  AV+H+H   + +++++    K+F 
Sbjct: 69  GRPVGGGKPSAETLLHTTVYKLFP---------EVNAVVHTHSPNATVISIVE--KKDFV 117
Query: 153 RITHMEMIKGIKG-HGYYDELVVPIIENTAYENELTDSLAKAIDAYPKAT----AVLVRN 207
            +   E++K     H +  ++ +PI  N     +    LAK ++ Y K +      L+R 
Sbjct: 118 ELEDYELLKAFPDIHTHEVKIKIPIFPN----EQNIPLLAKEVENYFKTSEDKYGFLIRG 173
Query: 208 HGIYVWGDSWINAKTQAECYHYLFDAAIKL 237
           HG+Y WG S   A    E   ++F+  +KL
Sbjct: 174 HGLYTWGRSXEEALIHTEALEFIFECELKL 203

>pdb|1E46|P Chain P, L-Fuculose 1-Phosphate Aldolase From Escherichia Coli Mutant E73s Length = 215

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 34  ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN 93
           I + C     LG   GT G+++++  D         +L++P+G+  E++    +  + GN
Sbjct: 10  IIDTCLEMTRLGLNQGTAGNVSVRYQDG--------MLITPTGIPYEKLTESHIVFIDGN 61
Query: 94  GTTLXXXXXXXXXXXXXXCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMIN 146
           G                  S      M AY+ R DA AV+H+H +    V+++N
Sbjct: 62  G----------KHEEGKLPSSSWRFHMAAYQSRPDANAVVHNHAVHCTAVSILN 105

>pdb|1E47|P Chain P, L-Fuculose 1-Phosphate Aldolase From Escherichia Coli Mutant E73q Length = 215

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 34  ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN 93
           I + C     LG   GT G+++++  D         +L++P+G+  E++    +  + GN
Sbjct: 10  IIDTCLEMTRLGLNQGTAGNVSVRYQDG--------MLITPTGIPYEKLTESHIVFIDGN 61
Query: 94  GTTLXXXXXXXXXXXXXXCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMIN 146
           G                  S      M AY+ R DA AV+H+H +    V+++N
Sbjct: 62  G----------KHEEGKLPSSQWRFHMAAYQSRPDANAVVHNHAVHCTAVSILN 105

>pdb|1E48|P Chain P, L-Fuculose 1-Phosphate Aldolase From Escherichia Coli Mutant E73qY113FY209F Length = 215

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 34  ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN 93
           I + C     LG   GT G+++++  D         +L++P+G+  E++    +  + GN
Sbjct: 10  IIDTCLEMTRLGLNQGTAGNVSVRYQDG--------MLITPTGIPYEKLTESHIVFIDGN 61
Query: 94  GTTLXXXXXXXXXXXXXXCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMIN 146
           G                  S      M AY+ R DA AV+H+H +    V+++N
Sbjct: 62  G----------KHEEGKLPSSQWRFHMAAYQSRPDANAVVHNHAVHCTAVSILN 105

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	526
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	1e-87
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	7e-74
2irp_A	208	Putative aldolase class 2 protein AQ_1979; aldehyd	8e-68
2fk5_A	200	Fuculose-1-phosphate aldolase; class II aldolase,	2e-26
1k0w_A	231	L-ribulose 5 phosphate 4-epimerase; aldolase, isom	3e-24
1e4c_P	215	L-fuculose 1-phosphate aldolase; aldolase (class I	7e-21
2opi_A	212	L-fuculose-1-phosphate aldolase; L-fuculose-1-phos	1e-20
1pvt_A	238	Sugar-phosphate aldolase; structural genomics, PSI	3e-19
2v9l_A	274	Rhamnulose-1-phosphate aldolase; entropy index, me	8e-13
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-11
2z7b_A	270	MLR6791 protein; class II aldolase superfamily, ly	9e-09
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	7e-06
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	2e-05
3m4r_A	222	Uncharacterized protein; short chain dehydrogenase	2e-05
3ocr_A	273	Class II aldolase/adducin domain protein; PSI-2, m	1e-04
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	1e-04
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	3e-04
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	3e-04
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	6e-04
2zg6_A	220	Putative uncharacterized protein ST2620, probable	8e-04

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261

 Score =  269 bits (689), Expect = 1e-87
 Identities = 110/246 (44%), Positives = 158/246 (64%), Gaps = 5/246 (2%)

Query: 285 RCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQG 344
             I+LDIEGTTTPI+FV ++LFPY  +NV ++L   ++  E Q D+ LLR Q E+D    
Sbjct: 11  TVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDAHLD 70

Query: 345 VAGAVPIPPGDAG--KEEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGE 402
            A  +P   G+     +++I A+V NV   +  DRK TALKQLQGH+WR  F +  ++ E
Sbjct: 71  GAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMKAE 130

Query: 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRET 462
            F DV  A+ KW   G KVYIYSSGS  AQ+L+FG+S  GD+ + + G FDT +G+K E+
Sbjct: 131 FFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVES 190

Query: 463 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG--FKTI 520
            SY +I +S+G    + ILF+TDV +EA+AA+ A + V + +RPGN  L ++    +  I
Sbjct: 191 ESYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 249

Query: 521 NSFAEI 526
            SF+E+
Sbjct: 250 TSFSEL 255

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 Length = 253

 Score =  233 bits (596), Expect = 7e-74
 Identities = 75/251 (29%), Positives = 118/251 (47%), Gaps = 38/251 (15%)

Query: 285 RCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQG 344
              +LDIEGT  PISFV E LFPY  + V + +      +   + +              
Sbjct: 32  STYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFH---------- 81

Query: 345 VAGAVPIPPGDAGKEEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVF 404
                          +    L A++  ++  D K   LKQLQG++W  G+ES +++  V+
Sbjct: 82  --------------IDNKEQLQAHILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVY 127

Query: 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN--------SNYGDLRKYLSGFFDT-A 455
            D  + +++      +V+IYSSGS  AQ+L+FG          +  DL  Y+ G+FD   
Sbjct: 128 ADAIDFIKRKK----RVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINT 183

Query: 456 VGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENH 515
            G K ET SY  I   +G    SE+LF++D   E  AA   G+   ++ RPGN P+P+  
Sbjct: 184 SGKKTETQSYANILRDIGAK-ASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQ 242

Query: 516 GFKTINSFAEI 526
            ++   +F  +
Sbjct: 243 KYQVYKNFETL 253

>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus} Length = 208

 Score =  216 bits (552), Expect = 8e-68
 Identities = 48/216 (22%), Positives = 86/216 (39%), Gaps = 20/216 (9%)

Query: 28  KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDM 87
            E    I E  R  ++ GWV  T G+I+ KV ++        I ++ SG  K ++ PED+
Sbjct: 10  SEKVEEIIEAGRILHSRGWVPATSGNISAKVSEE-------YIAITASGKHKGKLTPEDI 62

Query: 88  YVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMIN 146
            ++   G  +    P          S    L    Y+   +  AV+H+H   + +++++ 
Sbjct: 63  LLIDYEGRPVGGGKP----------SAETLLHTTVYKLFPEVNAVVHTHSPNATVISIVE 112

Query: 147 PMSKEFRITHMEMIKGIKG-HGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLV 205
                  +   E++K     H +  ++ +PI  N      L   +             L+
Sbjct: 113 K-KDFVELEDYELLKAFPDIHTHEVKIKIPIFPNEQNIPLLAKEVENYFKTSEDKYGFLI 171

Query: 206 RNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 241
           R HG+Y WG S   A    E   ++F+  +KL    
Sbjct: 172 RGHGLYTWGRSMEEALIHTEALEFIFECELKLLSFH 207

>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A Length = 200

 Score =  105 bits (264), Expect = 2e-26
 Identities = 34/199 (17%), Positives = 70/199 (35%), Gaps = 34/199 (17%)

Query: 34  ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN 93
             ++    +  G +S T G+ +++             L++ SGVQK R+ PED+  +   
Sbjct: 9   FRQVGEDLFAQGLISATAGNFSVRTKG--------GFLITKSGVQKARLTPEDLLEVPLE 60

Query: 94  GTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFR 153
           G      S            + + +  + Y +  A A++H+H   +  ++         R
Sbjct: 61  GPIPEGAS-----------VE-SVVHREVYRRTGARALVHAHPRVAVALSFHL---SRLR 105

Query: 154 ITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAI-DAYPKATAVLVRNHGIYV 212
              +E              +  +          T+  A ++ +A  +  A L+R HG + 
Sbjct: 106 PLDLEG----------QHYLKEVPVLAPKTVSATEEAALSVAEALREHRACLLRGHGAFA 155

Query: 213 WGDSWINAKTQAECYHYLF 231
            G      +   E Y  + 
Sbjct: 156 VGLKEAPEEALLEAYGLMT 174

>1k0w_A L-ribulose 5 phosphate 4-epimerase; aldolase, isomerase; 2.10A {Escherichia coli} SCOP: c.74.1.1 PDB: 1jdi_A Length = 231

 Score =  100 bits (250), Expect = 3e-24
 Identities = 42/220 (19%), Positives = 76/220 (34%), Gaps = 22/220 (10%)

Query: 27  VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPED 86
           +++ +  + E          V+ T G+++    +        + ++ PSGV    M  +D
Sbjct: 2   LEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRER------GVFVIKPSGVDYSIMTADD 55

Query: 87  MYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMI 145
           M V+S     +   + KP        SD  P     Y+     G ++H+H   S   T+ 
Sbjct: 56  MVVVSIETGEVVEGAKKP-------SSDT-PTHRLLYQAFPSIGGIVHTH---SRHATIW 104

Query: 146 NPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAID----AYPKAT 201
               +    T         G       +     N  YE E  + + +  +       +  
Sbjct: 105 AQAGQSIPATGTTHANYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMP 164

Query: 202 AVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 241
            VLV +HG + WG +  +A   A     +    I   QL 
Sbjct: 165 GVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLA 204

>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P Length = 215

 Score = 90.0 bits (224), Expect = 7e-21
 Identities = 38/191 (19%), Positives = 74/191 (38%), Gaps = 33/191 (17%)

Query: 28  KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDM 87
            +    I + C     LG   GT G+++++  D         +L++P+G+  E++    +
Sbjct: 4   NKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQD--------GMLITPTGIPYEKLTESHI 55

Query: 88  YVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMIN 146
             + GNG              P   S+     M AY+ R DA AV+H+H   +   T ++
Sbjct: 56  VFIDGNGKHEE-------GKLPQ--SE-WRFHMAAYQSRPDANAVVHNH---AVHCTAVS 102

Query: 147 PMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAI-DAYPKATAVLV 205
            +++     H  +              +P      Y    T  L++ +  A     A L+
Sbjct: 103 ILNRSIPAIHYMIAAAGGNS-------IPCAP---YATFGTRELSEHVALALKNRKATLL 152

Query: 206 RNHGIYVWGDS 216
           ++HG+     +
Sbjct: 153 QHHGLIACEVN 163

>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron} Length = 212

 Score = 89.2 bits (222), Expect = 1e-20
 Identities = 34/200 (17%), Positives = 72/200 (36%), Gaps = 30/200 (15%)

Query: 28  KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDM 87
            E   L       +     +  + G+++ ++ +          L+S +G     +  E +
Sbjct: 4   DEHIELFLAQAHRYGDAKLMLCSSGNLSWRIGE--------EALISGTGSWVPTLAKEKV 55

Query: 88  YVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMIN 146
            + +    T ++        KP    + +   +    +R D   V+H     +  ++ + 
Sbjct: 56  SICNIASGTPTN------GVKPS--ME-STFHLGVLRERPDVNVVLHFQSEYATAISCMK 106

Query: 147 PMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAI-DAYPKATAVLV 205
                F +T  E+   +          +P+I    Y    +  LAKA+ +A  K  +VL+
Sbjct: 107 NKPTNFNVTA-EIPCHVGSE-------IPVIP---YYRPGSPELAKAVVEAMLKHNSVLL 155

Query: 206 RNHGIYVWGDSWINAKTQAE 225
            NHG  V G  +     +A 
Sbjct: 156 TNHGQVVCGKDFDQVYERAT 175

>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1 Length = 238

 Score = 86.0 bits (213), Expect = 3e-19
 Identities = 29/215 (13%), Positives = 70/215 (32%), Gaps = 38/215 (17%)

Query: 26  AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDD--------------SIPKPQQLIL 71
            ++ET   I ++       G      G+I++++ +                   P+  +L
Sbjct: 2   HMRETIREIQKVAYWLAIKGLSEANAGNISVRLDERPEGYEVKSVNEYGFDYDGPEMYLL 61

Query: 72  MSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR----- 126
           ++ +G +   +  +D  +   +              KP   +   P  +  + K      
Sbjct: 62  ITATGSRMREVYEDDSKICLLHVLPGKHYEILHGNGKP---TSEFPTHLMIHAKFKEMNP 118

Query: 127 DAGAVIHSHGIESCLVTMINPMSKEFR----ITHMEMIKGIKGHGYYDELVVPIIENTAY 182
           +  A++H+H +    +  +    +       I    +I   +G        + ++E   +
Sbjct: 119 EKKAIVHTHPLNLLTLMNLEEFQELLPKMMKIHPEVLIFFPQG--------ISVVE---F 167

Query: 183 ENELTDSLAKAI-DAYPKATAVLVRNHGIYVWGDS 216
           E   +  L     +      AVL   HG+  +G  
Sbjct: 168 EKPGSVELGLKTVEKSEGKDAVLWDKHGVVAFGKD 202

>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A Length = 274

 Score = 67.7 bits (165), Expect = 8e-13
 Identities = 30/240 (12%), Positives = 68/240 (28%), Gaps = 45/240 (18%)

Query: 19  QAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPK------------- 65
           Q       V+     + +     +  GW    GG++T+++ D  I               
Sbjct: 2   QNITYSWFVQG----MIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIP 57

Query: 66  --------PQQLILMSPSGVQKERM--EPED---MYVLSGNGTTLSSPSPKPYPHKPPKC 112
                        +++ SG     +  +P     +  +  +G              P   
Sbjct: 58  LSQPMPLLANTPFIVTGSGKFFRNVQLDPAANLGIVKVDSDGAGYHILWGLTNEAVPT-- 115

Query: 113 SDCAPLFMKAYEKR------DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGH 166
           S+  P    ++ +R          ++H H      +T +           +      +G 
Sbjct: 116 SEL-PAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQL-----WEGS 169

Query: 167 GYYDELVVPIIENTAYENELTDSLAKAI-DAYPKATAVLVRNHGIYVWGDSWINAKTQAE 225
                +    +    +    TD++ +A      K + VL   HG++  G +        +
Sbjct: 170 TECLVVFPDGVGILPWMVPGTDAIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLID 229

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 64.9 bits (157), Expect = 4e-11
 Identities = 80/605 (13%), Positives = 174/605 (28%), Gaps = 177/605 (29%)

Query: 19  QAYLEGRAVKET-----RVLISELCRHF----------YTLGWVSGTGGSITIKVHDDSI 63
            A+++    K+       +L  E   H             L W   +     ++   + +
Sbjct: 27  DAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEV 86

Query: 64  PKPQQLILMSPSGVQKERMEPE---DMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFM 120
            +     LMSP  ++ E+ +P     MY+   +     +     Y     +      L  
Sbjct: 87  LRINYKFLMSP--IKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYL--KLRQ 142

Query: 121 KAYEKRDAGAVIHSHGI----ESCLVTMINPMSKEFRITHMEMIKGI----KGHGYYDEL 172
              E R A  V+   G+    ++ +   +      +++    M   I      +    E 
Sbjct: 143 ALLELRPAKNVL-IDGVLGSGKTWVALDV---CLSYKVQCK-MDFKIFWLNLKNCNSPET 197

Query: 173 VVPIIENTAYE-------------------NELTDSLAKAIDA--YPKATAVLVRNHGIY 211
           V+ +++   Y+                   + +   L + + +  Y     VL  N    
Sbjct: 198 VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL-LN---- 252

Query: 212 VWGDSW-INAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL--GLGSNGNVNTS 268
           V  ++   NA          F+ + K+    L   T     TR  ++   L +    + S
Sbjct: 253 VQ-NAKAWNA----------FNLSCKI----L--LT-----TRFKQVTDFLSAATTTHIS 290

Query: 269 AKAVTEG--SDYGSGLFPRCIVLDIEG------TTTP--ISFVSEVL--FP--------Y 308
               +     D    L  + +    +       TT P  +S ++E +             
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHV 350

Query: 309 ARDNVGKHLSVTYDTAETQDDIKLLRSQV--EDDLKQGVAGAVPIPP-------GDAGKE 359
             D +   +  + +  E  +  K+                    IP         D  K 
Sbjct: 351 NCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPS--------AHIPTILLSLIWFDVIKS 402

Query: 360 EV--IAALVANVDAMIKADRK--ITALKQLQGHIWRTGFESNELEGEVFD--DVPEALEK 413
           +V  +   +    ++++   K    ++  +   +         L   + D  ++P+  + 
Sbjct: 403 DVMVVVNKLHK-YSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDS 461

Query: 414 WHSLGTKV--YIYS------SGSRLAQ-----RLIFGNSNY------------------- 441
              +   +  Y YS            +     R++F +  +                   
Sbjct: 462 DDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSIL 521

Query: 442 ---GDLRKYLSGFFDTAVGNKRETPSYVEITNSLG--VDKPSEILFV---TDVYQEATAA 493
                L+ Y     D         P Y  + N++   + K  E L     TD+ + A  A
Sbjct: 522 NTLQQLKFYKPYICD-------NDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMA 574

Query: 494 KAAGL 498
           +   +
Sbjct: 575 EDEAI 579

>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti} Length = 270

 Score = 55.5 bits (134), Expect = 9e-09
 Identities = 31/198 (15%), Positives = 66/198 (33%), Gaps = 38/198 (19%)

Query: 28  KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDM 87
           ++    +    +     G +  T G I+ +      P+      +    +    +  +D+
Sbjct: 39  RKVFEELVTATKILLNEGIM-DTFGHISARD-----PEDPASFFL-AQKLAPSLITVDDI 91

Query: 88  YVLSGNGTTLSSPSPKP--YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIE----SC 140
              + +G T  +       Y H             + Y+ R D   V+H+H         
Sbjct: 92  QRFNLDGETSDNRPSYLERYIH------------SEIYKTRPDVQCVLHTHSPAVLPYCF 139

Query: 141 LVTMINPMSKEFRITHMEMIKGIKGHGYYD--ELVVPIIENTAYENELTDSLAKAIDAYP 198
           + T + P      +THM    G +    Y+  +      +      ++   +A+++    
Sbjct: 140 VDTPLRP------VTHMGAFIG-ESVPVYEIRDKHGDETDLFGGSPDVCADIAESLG--- 189

Query: 199 KATAVLVRNHGIYVWGDS 216
             T VL+  HG+   G S
Sbjct: 190 SQTVVLMARHGVVNVGKS 207

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234

 Score = 46.4 bits (110), Expect = 7e-06
 Identities = 28/151 (18%), Positives = 52/151 (34%), Gaps = 24/151 (15%)

Query: 388 HIWRTGFESNELEGEVFDDVPEALEKWHSLGT-KVYIYSSGSRLAQRLIFGNSNYGDLRK 446
            I   G    ++  E+   V E L+     G  K+ + + G  L Q      S       
Sbjct: 91  QIVDLGKSLLKMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSG------ 144

Query: 447 YLSGFFDTA-VGNKRETPSYVEITNSLGVDKPSEILFV-----TDVYQEATAAKAAGLEV 500
            LS +FD   V + +    Y+ + + L +  PSE+L V     +D+        + G   
Sbjct: 145 -LSPYFDHIEVMSDKTEKEYLRLLSILQIA-PSELLMVGNSFKSDI----QPVLSLGGYG 198

Query: 501 V-----ISIRPGNGPLPENHGFKTINSFAEI 526
           V     +  +        +   K +    ++
Sbjct: 199 VHIPFEVMWKHEVTETFAHERLKQVKRLDDL 229

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137

 Score = 43.6 bits (103), Expect = 2e-05
 Identities = 17/107 (15%), Positives = 30/107 (28%), Gaps = 16/107 (14%)

Query: 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFFDTAVG--- 457
           E        L      G    I S+                 +R+   +G  D  +    
Sbjct: 18  EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAP--------IRELETNGVVDKVLLSGE 69

Query: 458 ---NKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 501
               K E  ++    +++ +    + + V D       A  AGL  V
Sbjct: 70  LGVEKPEEAAFQAAADAIDLP-MRDCVLVDDSILNVRGAVEAGLVGV 115

>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum} Length = 222

 Score = 44.7 bits (104), Expect = 2e-05
 Identities = 23/202 (11%), Positives = 60/202 (29%), Gaps = 17/202 (8%)

Query: 45  GWVSGTGGSITIKVHD-DSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPK 103
             V   GG+ ++K  + D   +   ++ +  SG     ++      +  +   L++    
Sbjct: 32  DLVLHGGGNTSVKTTERDHAGRIISVLRVKNSGSNLGTIDSRGFTGIRMDDA-LAAAKID 90

Query: 104 PYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGI 163
               +         +   +         +H+      ++            +H + I  I
Sbjct: 91  KMTDEAMVDYLKKSMVNPSEPSPSVETFLHAFLPYKFVMH-----------SHADAILSI 139

Query: 164 KGHGYYDELVVPIIENTAYENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWIN 219
                  + +  I+ N      +      A +           +++R HG+  +GD+   
Sbjct: 140 TNTDLPSDQIAKILGNVVVLPYIPPGFTLAKEVMNCFKKGIDGIVLRKHGLLTFGDTGKE 199

Query: 220 AKTQAECYHYLFDAAIKLHQLG 241
           A  +        +  I+    G
Sbjct: 200 AYDRHINIVSRAENFIREKTDG 221

>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV} Length = 273

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 34/242 (14%), Positives = 74/242 (30%), Gaps = 51/242 (21%)

Query: 1   MATLAVNGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHD 60
           ++ L +  G   +     +  +      E RV ++   R      W        + +V  
Sbjct: 6   VSALPLQPGTTPSGGGSVRDRVS-PQEWEVRVKLAAAYRLAALKRWTDHIYTHFSARV-- 62

Query: 61  DSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP------HKPPKCSD 114
              P P +  L++  G+  + +   ++  +  +GT +  P+           H       
Sbjct: 63  ---PGPDEHFLINAFGLLFDEITASNLVKVDIDGTIVDDPTGLGINYAGYVIHSA----- 114

Query: 115 CAPLFMKAYEKR-DAGAVIHSHGIE----SCLVTMINPMSKEFRITHMEMIKGIKGHGYY 169
                   +  R D  AV+H+H  +    S     + P+S+                 + 
Sbjct: 115 -------IHAARHDLQAVLHTHTRDGIAVSAQKDGLLPISQH-------------SIAFS 154

Query: 170 DELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHY 229
             +     E  A +    + L   +      + +++RNHG+   G       +       
Sbjct: 155 GRVAYHGYEGIALDLSERERLVADLG---DKSVMILRNHGLLTGG------VSVEHAIQQ 205

Query: 230 LF 231
           L 
Sbjct: 206 LH 207

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 18/121 (14%), Positives = 38/121 (31%), Gaps = 30/121 (24%)

Query: 395 ESNELEGEVFDDVPEALEKWHSLGTKVYIYSS-GSRLAQRLI--FGNSNYGDLRKYLSGF 451
                E +V+D +   L      G  + + +S  +  +++++  F           L+ +
Sbjct: 79  AKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFK----------LAFY 128

Query: 452 FDTAVGNKRETPSYV-------EITNSLGVDKPSEILFV----TDVYQEATAAKAAGLEV 500
           FD  VG+                   SL +    + + +     DV      A    L  
Sbjct: 129 FDAIVGS-SLDGKLSTKEDVIRYAMESLNIK-SDDAIMIGDREYDV----IGALKNNLPS 182

Query: 501 V 501
           +
Sbjct: 183 I 183

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 32/146 (21%), Positives = 46/146 (31%), Gaps = 24/146 (16%)

Query: 394 FESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLA---QRLIFGNSNYGDLRKYLSG 450
              N  E  V +   EAL+     G K  +  +         RL+            L  
Sbjct: 91  AILNVDESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFG-------LME 143

Query: 451 FFDTAVG------NKRETPS---YVEITNSLGVDKPSEILFVTDVYQE-ATAAKAAGLEV 500
           F D           K   P    + ++ NS  V KP E L + D Y E    A+  G+  
Sbjct: 144 FIDKTFFADEVLSYK---PRKEMFEKVLNSFEV-KPEESLHIGDTYAEDYQGARKVGMWA 199

Query: 501 VISIRPGNGPLPENHGFKTINSFAEI 526
           V   + G+           I S A +
Sbjct: 200 VWINQEGDKVRKLEERGFEIPSIANL 225

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 19/135 (14%)

Query: 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT-----AV 456
           +V D   + L +  + G ++ + S+  R  + ++      G     L   FD      A 
Sbjct: 106 QVLDGAEDTLRECRTRGLRLAVISNFDRRLEGIL---GGLG-----LREHFDFVLTSEAA 157

Query: 457 G-NKRETPSYVEITNSLGVDKPSEILFVTDVYQE-ATAAKAAGLEVVISIRPGNGPLPEN 514
           G  K +   + E      + +P     V D Y       +A G+   + + P        
Sbjct: 158 GWPKPDPRIFQEALRLAHM-EPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVR 216

Query: 515 HGFK---TINSFAEI 526
                   + S A +
Sbjct: 217 DSVPKEHILPSLAHL 231

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240

 Score = 40.7 bits (96), Expect = 6e-04
 Identities = 17/121 (14%), Positives = 45/121 (37%), Gaps = 29/121 (23%)

Query: 395 ESNELEGEVFDDVPEALEKWHSLGTKVYIYSS-GSRLAQRLI--FGNSNYGDLRKYLSGF 451
           +    E ++++++ E LE  +  G  + + +S  +  A+ ++  F           +  +
Sbjct: 103 DKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFD----------IDRY 152

Query: 452 FDTAVGNKRETPSYV-------EITNSLGVDKPSEILFV----TDVYQEATAAKAAGLEV 500
           F    G+     + V        + +   V    +++ V     D+      AK  G++ 
Sbjct: 153 FKYIAGS-NLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDI----IGAKKIGIDS 207

Query: 501 V 501
           +
Sbjct: 208 I 208

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220

 Score = 40.1 bits (94), Expect = 8e-04
 Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 37/139 (26%)

Query: 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRE 461
            ++DD  E LE   S G K+ + S+ S   + L+     +      L  +FD        
Sbjct: 95  FLYDDTLEFLEGLKSNGYKLALVSNASPRVKTLL---EKFD-----LKKYFDALA----- 141

Query: 462 TPSYVEITNSLGVDKPS-------------EILFVTDVYQE-ATAAKAAGLEVVISIRPG 507
                 ++  +   KP+               + V D+Y+     AK + ++ ++ +   
Sbjct: 142 ------LSYEIKAVKPNPKIFGFALAKVGYPAVHVGDIYELDYIGAKRSYVDPIL-LDRY 194

Query: 508 NGPLPENHGFKTINSFAEI 526
           +           + +  E 
Sbjct: 195 DFYPDVRD---RVKNLREA 210

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	526
1e4c_P	215	L-fuculose 1-phosphate aldolase; aldolase (class I	100.0
2irp_A	208	Putative aldolase class 2 protein AQ_1979; aldehyd	100.0
3ocr_A	273	Class II aldolase/adducin domain protein; PSI-2, m	100.0
2opi_A	212	L-fuculose-1-phosphate aldolase; L-fuculose-1-phos	100.0
1k0w_A	231	L-ribulose 5 phosphate 4-epimerase; aldolase, isom	100.0
2fk5_A	200	Fuculose-1-phosphate aldolase; class II aldolase,	100.0
2v9l_A	274	Rhamnulose-1-phosphate aldolase; entropy index, me	100.0
2z7b_A	270	MLR6791 protein; class II aldolase superfamily, ly	100.0
1pvt_A	238	Sugar-phosphate aldolase; structural genomics, PSI	100.0
3m4r_A	222	Uncharacterized protein; short chain dehydrogenase	100.0
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.97
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.96
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.95
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.94
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.94
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.94
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.93
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.92
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.92
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.92
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.92
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.92
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.91
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.91
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.91
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.91
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.91
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.91
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.91
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.91
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.9
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.9
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.9
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.9
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.9
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.9
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.9
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.9
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.9
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.89
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.89
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.89
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.89
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.89
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.89
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.89
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.89
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.89
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.89
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.89
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.89
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.89
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.88
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.88
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.88
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.88
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.88
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.87
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.87
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.87
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.87
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.86
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.86
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.86
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.86
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.85
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.85
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.85
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.84
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.84
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.84
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.84
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.83
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.83
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.83
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.81
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.81
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	99.8
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.79
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.78
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.78
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.78
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.78
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.78
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.75
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.75
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.75
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.75
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.73
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.73
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.73
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.72
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.72
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	99.69
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.69
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.68
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.66
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.65
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.65
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	99.64
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.63
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.63
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.62
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	99.62
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.61
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.6
3mmz_A	176	Putative HAD family hydrolase; structural genomics	99.6
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	99.59
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	99.58
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	99.57
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.57
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	99.34
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.56
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.56
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.56
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.56
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	99.55
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.51
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	99.5
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	99.47
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	99.45
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	99.42
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	99.38
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	99.23
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	99.22
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	99.17
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	99.03
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	99.03
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	99.01
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	99.01
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	99.0
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	98.98
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	98.97
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	98.97
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	98.94
3dao_A	283	Putative phosphatse; structural genomics, joint ce	98.92
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	98.91
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	98.9
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	98.84
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	98.83
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	98.81
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	98.76
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	98.71
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	98.59
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	98.4
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	98.39
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	98.37
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	98.32
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	98.31
4gxt_A	385	A conserved functionally unknown protein; structur	98.13
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	98.02
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	97.88
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	97.79
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	97.66
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	97.58
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	97.47
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	97.34
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	97.27
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	97.16
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	97.15
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	97.05
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	96.96
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	96.72
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	96.46
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	95.63
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	95.58
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	95.32
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	94.8
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	94.45
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	94.13
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	94.08
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	93.98
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	93.67
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	93.28
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	93.08
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	92.65
3geb_A	274	EYES absent homolog 2; hydrolase, activator, alter	91.11
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	87.61
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	86.45

>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P

Probab=100.00  E-value=2.8e-44  Score=343.71  Aligned_cols=204  Identities=22%  Similarity=0.320  Sum_probs=178.5

Q ss_pred             ccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCC
Q 009774           25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP  104 (526)
Q Consensus        25 ~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p  104 (526)
                      |+.+++|++|++++|+++++||+.+++||||+|+++        .|||||||.+|++|+++||++||+||++++|.  +|
T Consensus         1 m~~~~~r~~l~~~~r~l~~~gl~~~~~GNiS~R~~~--------~~lItpsG~~~~~l~~~dlv~vd~~G~~~~g~--~p   70 (215)
T 1e4c_P            1 MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQD--------GMLITPTGIPYEKLTESHIVFIDGNGKHEEGK--LP   70 (215)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTTSCCTTCCEEEEEETT--------EEEECCTTCCGGGCCGGGCEEECTTCCBCTTC--CC
T ss_pred             CCHHHHHHHHHHHHHHHHHCcCCCCCCCeEEEEeCC--------cEEEeCCCCCcccCCHHHEEEEcCCCCCCCCC--CC
Confidence            567789999999999999999999999999999987        79999999999999999999999999999875  35


Q ss_pred             CCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-CC
Q 009774          105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AY  182 (526)
Q Consensus       105 ~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~  182 (526)
                              |+|+.+|..||++| |++||+|+||+|+++||+.+..   ++..++ +...++|.      .||+++|. ++
T Consensus        71 --------Sse~~lH~~iy~~rpdv~aVvHtHs~~~~a~s~~~~~---l~~~~~-~~~~~~~~------~ip~~~y~~~g  132 (215)
T 1e4c_P           71 --------QSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSILNRS---IPAIHY-MIAAAGGN------SIPCAPYATFG  132 (215)
T ss_dssp             --------CTTHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCC---BCSSSG-GGGGGTSS------CBCEECCCCTT
T ss_pred             --------ChHHHHHHHHHHhCCCCCEEEEcCcHHHHHHHHhCCC---CCcccH-HHHHhCCC------CcceeeCCCCC
Confidence                    99999999999999 9999999999999999999853   433332 33334321      49999995 68


Q ss_pred             chHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccccc
Q 009774          183 ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLGL  259 (526)
Q Consensus       183 ~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~~~  259 (526)
                      +.++++.+++.|++   .++|||+|||+++||+|+++|+.+++.+|++|++++.++++|.+....++++++++...+
T Consensus       133 ~~~la~~i~~~l~~---~~avll~nHG~~~~G~~~~eA~~~~~~lE~~a~~~~~a~~~g~~~~~l~~~~~~~~~~~~  206 (215)
T 1e4c_P          133 TRELSEHVALALKN---RKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVVLEKF  206 (215)
T ss_dssp             CHHHHHHHHHHTSS---CSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCSSCCCCCHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHhcc---CCEEEEcCCCcEEEeCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Confidence            89999999999976   599999999999999999999999999999999999999999885556666877776533

>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}

Probab=100.00  E-value=7.3e-44  Score=339.37  Aligned_cols=198  Identities=24%  Similarity=0.446  Sum_probs=175.2

Q ss_pred             cHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCC
Q 009774           26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPY  105 (526)
Q Consensus        26 ~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~  105 (526)
                      +.+++|++|++++|+++++||+.+++||||+|++++       .|||||||.++++|+++||++||+||+++ +. .+| 
T Consensus         8 ~~~~~r~~l~~~~r~l~~~gl~~~~~GNiS~R~~~~-------~~~ItpsG~~~~~l~~~dlv~vd~~g~~v-~~-~~p-   77 (208)
T 2irp_A            8 KFSEKVEEIIEAGRILHSRGWVPATSGNISAKVSEE-------YIAITASGKHKGKLTPEDILLIDYEGRPV-GG-GKP-   77 (208)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCSGGGCCEEEEECSSS-------EEEEECTTSCGGGCCGGGEEEEETTSCBT-TS-CCC-
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCeEEEEeCCC-------EEEEecCCCCcccCCcccEEEEcCCCCCC-CC-CCC-
Confidence            456789999999999999999999999999999884       89999999999999999999999999998 43 355 


Q ss_pred             CCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCc-cceeeecCCCCc
Q 009774          106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDE-LVVPIIENTAYE  183 (526)
Q Consensus       106 ~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~vpv~~~~~~~  183 (526)
                             |+|+.+|..||++| |++||+|+||+|+++||+.+.. .++|+..+++.+.++|..+++. ..||+++|.+++
T Consensus        78 -------Sse~~lH~~iy~~rpdv~aVvHtHs~~a~a~s~~~~~-~~lp~~~~~~~~~~~g~~~~~~~~~vp~~~~~~g~  149 (208)
T 2irp_A           78 -------SAETLLHTTVYKLFPEVNAVVHTHSPNATVISIVEKK-DFVELEDYELLKAFPDIHTHEVKIKIPIFPNEQNI  149 (208)
T ss_dssp             -------CHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHCCS-SEEECCCHHHHTTCTTCCCSCSSCEEEEECCCSCH
T ss_pred             -------CccHHHHHHHHHhCCCCCEEEecCCHHHHHHHhhcCC-CCCCccHHHHHHHhCCccccccccceeeecCCCCH
Confidence                   99999999999999 9999999999999999998753 3577667777776655433321 259999998899


Q ss_pred             hHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCC
Q 009774          184 NELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG  241 (526)
Q Consensus       184 ~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g  241 (526)
                      .++++.++++|++++..++|||+|||+++||+|+++|+.+++.+|++|++++.++++|
T Consensus       150 ~~La~~i~~~l~~~~~~~avll~nHG~~~~G~~~~eA~~~~~~lE~~a~~~~~~~~~g  207 (208)
T 2irp_A          150 PLLAKEVENYFKTSEDKYGFLIRGHGLYTWGRSMEEALIHTEALEFIFECELKLLSFH  207 (208)
T ss_dssp             HHHHHHHHHHHHHCSCCSCEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHhcCCCceEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            9999999999987655679999999999999999999999999999999999999887

>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}

Probab=100.00  E-value=4.6e-43  Score=345.12  Aligned_cols=212  Identities=17%  Similarity=0.163  Sum_probs=179.9

Q ss_pred             hhccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCC
Q 009774           23 EGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSP  102 (526)
Q Consensus        23 ~~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~  102 (526)
                      .+.+++++|++|++++|.++++||+.+++||||+|++++     .+.|||||||++|++|+++||++||+||++++|...
T Consensus        27 ~~~~e~~~R~~la~~~r~l~~~G~~~~~~GNiS~R~~~~-----~~~flItPsG~~~~~lt~~dlv~vdldG~~v~g~~~  101 (273)
T 3ocr_A           27 VSPQEWEVRVKLAAAYRLAALKRWTDHIYTHFSARVPGP-----DEHFLINAFGLLFDEITASNLVKVDIDGTIVDDPTG  101 (273)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTCCBTTBCCEEEECSSS-----SCEEEECCTTCCGGGCCGGGCEEEETTCCEEECTTS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCccCCCcEEEEEecCC-----CCEEEEeCCCCChhhCCccCEEEEeCCCCCccCCCC
Confidence            346788999999999999999999999999999999863     258999999999999999999999999999997311


Q ss_pred             CCCCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-
Q 009774          103 KPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-  180 (526)
Q Consensus       103 ~p~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-  180 (526)
                      .      .+||+|+.+|..||++| |++||+|+||+|++++|+++....  ++. ++....+ |       .||+++|. 
T Consensus       102 ~------~~psse~~iH~~Iy~~rpdv~aVvHtHs~~a~a~s~~~~~l~--p~~-~~~~~~~-g-------~v~~~~y~~  164 (273)
T 3ocr_A          102 L------GINYAGYVIHSAIHAARHDLQAVLHTHTRDGIAVSAQKDGLL--PIS-QHSIAFS-G-------RVAYHGYEG  164 (273)
T ss_dssp             C------CCCTTTTHHHHHHHHHCTTCCEEEEECCHHHHHHHTSTTCSC--SCS-HHHHTTT-T-------TEEEECCCC
T ss_pred             C------CCCChHHHHHHHHHHhCCCCcEEEEcCChHHHHHHHccCCCC--Ccc-HHHHHhC-C-------CEEEECCCC
Confidence            0      12399999999999999 999999999999999999975322  333 3343322 2       39999995 


Q ss_pred             CC-chHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCC-CCCCCCCCCcccccccc
Q 009774          181 AY-ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG-LDWSTPNHGPTRNFKLG  258 (526)
Q Consensus       181 ~~-~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g-~~~~~~~~~~~~~~~~~  258 (526)
                      ++ +.++++.+++.|++   .++|||+|||+++||+|+++||.+++.+|++|++++.++++| .+...+++++++++...
T Consensus       165 ~~~~~el~~~i~~~l~~---~~avlL~nHG~~~~G~tl~eA~~~~~~lE~~a~i~l~a~~~G~~~~~~l~~~~~~~~~~~  241 (273)
T 3ocr_A          165 IALDLSERERLVADLGD---KSVMILRNHGLLTGGVSVEHAIQQLHALEYACNIQIAAQSAGNAELVFPPREVIAKVEEQ  241 (273)
T ss_dssp             SSCCHHHHHHHHHHHTT---CSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHGGGCGGGCCCCCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhCc---CCEEEEcCCceEEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Confidence            44 78999999999986   599999999999999999999999999999999999999999 45556677688877664


Q ss_pred             c
Q 009774          259 L  259 (526)
Q Consensus       259 ~  259 (526)
                      +
T Consensus       242 ~  242 (273)
T 3ocr_A          242 A  242 (273)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=1.3e-42  Score=331.31  Aligned_cols=201  Identities=15%  Similarity=0.187  Sum_probs=169.6

Q ss_pred             cHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeC-CCCcccCCCCCC
Q 009774           26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSG-NGTTLSSPSPKP  104 (526)
Q Consensus        26 ~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~-dg~~~~g~~~~p  104 (526)
                      .+++.|++|++++|+++++||+.+++||||+|+++        .|||||||.++++|+++||++||+ ||++++|.  +|
T Consensus         2 ~~~~~r~~l~~~~r~l~~~gl~~~~~GNiS~R~~~--------~~lItpsG~~~~~l~~~dlv~vd~~~G~~~~g~--~p   71 (212)
T 2opi_A            2 ITDEHIELFLAQAHRYGDAKLMLCSSGNLSWRIGE--------EALISGTGSWVPTLAKEKVSICNIASGTPTNGV--KP   71 (212)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSSCTTCCEEEEEETT--------EEEEEBTTCCGGGCCGGGEEEEETTTCCBSSSC--CB
T ss_pred             ccHHHHHHHHHHHHHHHHCCCCCCCCCeEEEEeCC--------eEEEeCCCCChhHCCCCcEEEEECCCCCCCCCC--CC
Confidence            34678999999999999999999999999999987        699999999999999999999999 99999874  45


Q ss_pred             CCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCC---CCcccccHHHHHhhhcCCcccCccceeeecCC
Q 009774          105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPM---SKEFRITHMEMIKGIKGHGYYDELVVPIIENT  180 (526)
Q Consensus       105 ~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~  180 (526)
                              |+|+.+|+.||++| |++||+|+||+|+++||+.+..   ...+|..  .+  .+++       .||++||.
T Consensus        72 --------Sse~~lH~~iy~~rpdv~aVvHtHs~~~~a~s~~~~~~~~~~~lp~~--~~--~~g~-------~v~~~~y~  132 (212)
T 2opi_A           72 --------SMESTFHLGVLRERPDVNVVLHFQSEYATAISCMKNKPTNFNVTAEI--PC--HVGS-------EIPVIPYY  132 (212)
T ss_dssp             --------CTTHHHHHHHHHHCTTCCEEEEECCHHHHHHHHBSSCCSCCCCSTHH--HH--HTCS-------CCCEECCC
T ss_pred             --------ChhHHHHHHHHHhCCCCCEEEEeCcHHHHHHHhcCccccccccCchH--HH--HhCC-------CeEEEcCC
Confidence                    99999999999999 9999999999999999998731   0234332  12  2332       39999996


Q ss_pred             -CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccccc
Q 009774          181 -AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLGL  259 (526)
Q Consensus       181 -~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~~~  259 (526)
                       +++.++++.+++.|++   .++|||+|||+++||+|+++|+.+++.+|++|++++.+  .|.+ ...++++++++....
T Consensus       133 ~~g~~~la~~i~~~l~~---~~avll~nHG~~~~G~t~~eA~~~~~~lE~~a~~~~~a--~g~~-~~l~~~~~~~~~~~~  206 (212)
T 2opi_A          133 RPGSPELAKAVVEAMLK---HNSVLLTNHGQVVCGKDFDQVYERATFFEMACRIIVQS--GGDY-SVLTPEEIEDLEIYV  206 (212)
T ss_dssp             CTTCHHHHHHHHHHTSS---CSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHT--TTCC-CCCCHHHHHHCC---
T ss_pred             CCCcHHHHHHHHHHhcc---CCEEEEcCCCcEEEcCCHHHHHHHHHHHHHHHHHHHHh--cCCC-CCCCHHHHHHHHHHh
Confidence             7899999999999986   58999999999999999999999999999999999998  4544 346666887776644


Q ss_pred             CC
Q 009774          260 GS  261 (526)
Q Consensus       260 ~~  261 (526)
                      .+
T Consensus       207 ~~  208 (212)
T 2opi_A          207 LG  208 (212)
T ss_dssp             --
T ss_pred             CC
Confidence            43

>1k0w_A L-ribulose 5 phosphate 4-epimerase; aldolase, isomerase; 2.10A {Escherichia coli} SCOP: c.74.1.1 PDB: 1jdi_A

Probab=100.00  E-value=6e-42  Score=331.29  Aligned_cols=202  Identities=20%  Similarity=0.254  Sum_probs=167.6

Q ss_pred             HHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCC-CCcccCCCCCCCC
Q 009774           28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN-GTTLSSPSPKPYP  106 (526)
Q Consensus        28 ~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~d-g~~~~g~~~~p~~  106 (526)
                      +++|++|++++|+++++||+.+++||||+|++++      +.|||||||.++++|+++||++||++ |++++|. .+|  
T Consensus         3 ~~~r~~l~~~~r~l~~~gl~~~~~GNiS~R~~~~------~~~~ItpsG~~~~~l~~~dlv~vd~~~G~~v~g~-~~p--   73 (231)
T 1k0w_A            3 EDLKRQVLEANLALPKHNLVTLTWGNVSAVDRER------GVFVIKPSGVDYSIMTADDMVVVSIETGEVVEGA-KKP--   73 (231)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCTTCCEEEEEETTT------TEEEECBSSCCTTTCCGGGCEEEETTTCCEEECS-SCB--
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCceEEEEeCCC------CEEEEeCCCCChhhCCHhHEEEEECCCCCCCCCC-CCC--
Confidence            5789999999999999999999999999999763      49999999999999999999999999 9999875 345  


Q ss_pred             CCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCccccc-HHHHHhhhcCCcccCccceee--------
Q 009774          107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRIT-HMEMIKGIKGHGYYDELVVPI--------  176 (526)
Q Consensus       107 ~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~vpv--------  176 (526)
                            |+|+.+|..||++| |++||+|+||+|+++||+++.   .+|.. .+. ...+.|       .||+        
T Consensus        74 ------Sse~~lH~~iy~~rpdv~aVvHtHs~~a~a~s~~~~---~l~~~~~~~-~~~~~g-------~vp~~~~~~~~~  136 (231)
T 1k0w_A           74 ------SSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQ---SIPATGTTH-ANYFYG-------TIPCTRKMTDAE  136 (231)
T ss_dssp             ------CTTHHHHHHHHHHCTTCCEEEECCCHHHHHHHHHTC---CBCCCSHHH-HTTCSS-------CBCBCCCCCHHH
T ss_pred             ------ChhHHHHHHHHHhCCCCCEEEEeCcHHHHHHHHhCC---CCCCccHHH-HHHhCC-------Cceeeccccccc
Confidence                  99999999999999 999999999999999999975   34433 332 332323       3888        


Q ss_pred             --ecCC-CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccc
Q 009774          177 --IENT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTR  253 (526)
Q Consensus       177 --~~~~-~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~  253 (526)
                        +||. +++.++++.+.+.+.+..+.++|||+|||+++||+|+++|+.+++.+|++|++++.++++|+.....++++++
T Consensus       137 i~~~y~~~g~~~La~~~~~~~~~~l~~~avll~nHG~~~~G~~~~eA~~~~~~lE~~a~~~~~a~~~g~~~~~l~~~~~~  216 (231)
T 1k0w_A          137 INGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLN  216 (231)
T ss_dssp             HHSSHHHHHHHHHHHHHHHTTCCTTTCCEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCCCHHHHH
T ss_pred             cccCcCCCChHHHHHHHHHhhhccccCCEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHH
Confidence              5664 4566777776554332234699999999999999999999999999999999999999999754555555666


Q ss_pred             cc
Q 009774          254 NF  255 (526)
Q Consensus       254 ~~  255 (526)
                      +.
T Consensus       217 ~~  218 (231)
T 1k0w_A          217 KH  218 (231)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A

Probab=100.00  E-value=1.9e-41  Score=319.76  Aligned_cols=187  Identities=20%  Similarity=0.275  Sum_probs=165.9

Q ss_pred             HHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCCC
Q 009774           28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPH  107 (526)
Q Consensus        28 ~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~~  107 (526)
                      +++|++|++++|+++++||+.+++||||+|+++        .|||||||.+|++|+++||++||+||+++ +   +|   
T Consensus         3 ~~~r~~l~~~~r~l~~~Gl~~~~~GNiS~R~~~--------~~lItpsG~~~~~l~~~dlv~vd~~G~~~-~---~p---   67 (200)
T 2fk5_A            3 ARLYAAFRQVGEDLFAQGLISATAGNFSVRTKG--------GFLITKSGVQKARLTPEDLLEVPLEGPIP-E---GA---   67 (200)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTCCEEEEECSS--------EEEEEBTTCCGGGCCGGGEEEEESSSCCC-T---TB---
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC--------EEEEeCCCCCcccCCcccEEEEeCCCCCc-c---CC---
Confidence            568999999999999999999999999999944        89999999999999999999999999988 2   45   


Q ss_pred             CCCCCCCchHHHHHHHHhcCcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeee-cCC-CCchH
Q 009774          108 KPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPII-ENT-AYENE  185 (526)
Q Consensus       108 ~p~~~S~E~~lH~~iy~~~dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~-~~~-~~~~~  185 (526)
                           |+|+.+|..|||+.|++||+|+||+|+++||+.+.   .++...++... +.|       .||++ ||. +++.+
T Consensus        68 -----SsE~~~H~~iy~~pdv~aVvHtHs~~a~a~s~~~~---~l~~~~~~~~~-~~~-------~ip~~~~y~~~g~~e  131 (200)
T 2fk5_A           68 -----SVESVVHREVYRRTGARALVHAHPRVAVALSFHLS---RLRPLDLEGQH-YLK-------EVPVLAPKTVSATEE  131 (200)
T ss_dssp             -----CTTHHHHHHHHHHSCCSEEEEECCHHHHHHHTTCS---EECCSSHHHHH-HTS-------CEEEECCSCCSSSHH
T ss_pred             -----ChhHHHHHHHHhCCCCCEEEecCCHHHHHHHhcCC---CCCCccHHHHH-hCC-------CceEecCCCCCCcHH
Confidence                 99999999999987899999999999999999975   34444454433 223       39999 885 68999


Q ss_pred             HHHHHHHHHhhCCCCeEEEEcCCcceeec------CCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC
Q 009774          186 LTDSLAKAIDAYPKATAVLVRNHGIYVWG------DSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPN  248 (526)
Q Consensus       186 la~~i~~~l~~~~~~~~vll~nHG~~~~G------~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~  248 (526)
                      +++.+++.|++   .++|||+|||+++||      +|+++|+.+++.+|++|++++.++++|++.++..
T Consensus       132 la~~i~~~l~~---~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~  197 (200)
T 2fk5_A          132 AALSVAEALRE---HRACLLRGHGAFAVGLKEAPEEALLEAYGLMTTLEESAQILLYHRLWQGAGPALG  197 (200)
T ss_dssp             HHHHHHHHHHH---CSEEEETTTEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC-
T ss_pred             HHHHHHHHhCc---CCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccc
Confidence            99999999987   489999999999999      9999999999999999999999999998766543

>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A

Probab=100.00  E-value=1.1e-40  Score=329.63  Aligned_cols=215  Identities=14%  Similarity=0.165  Sum_probs=174.0

Q ss_pred             hccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCC---------------------CCCccEEEEeccCCCCCCC
Q 009774           24 GRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSI---------------------PKPQQLILMSPSGVQKERM   82 (526)
Q Consensus        24 ~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~---------------------~~~~~~~litpsG~~~~~l   82 (526)
                      .+.++++|++|++++|.|+++||+.+++||||+|++++++                     .-.++.|||||||.+|++|
T Consensus         3 ~~~~~~~~~~l~~~~r~l~~~Gl~~~~~GNiS~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lItpSG~~~~~l   82 (274)
T 2v9l_A            3 NITYSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIPLSQPMPLLANTPFIVTGSGKFFRNV   82 (274)
T ss_dssp             CGGGSHHHHHHHHHHHHHHHTTCCCTTCEEEEEECCHHHHGGGGGGSCSSCEEEECSSCCGGGTTCEEEEEBTTCCGGGT
T ss_pred             chhHHHHHHHHHHHHHHHHHCCCccCCCceEEEEcCCCCcccccccccccccccccccccccccCcEEEEeCCCCCHHHh
Confidence            3556689999999999999999999999999999976200                     0011389999999999999


Q ss_pred             --CCCC---EEEEeCCCC---cc---cCCCCCCCCCCCCCCCCchHHHHHHHHh-----c-CcceEEecCChHHHHHHhh
Q 009774           83 --EPED---MYVLSGNGT---TL---SSPSPKPYPHKPPKCSDCAPLFMKAYEK-----R-DAGAVIHSHGIESCLVTMI  145 (526)
Q Consensus        83 --~~~d---iv~vd~dg~---~~---~g~~~~p~~~~p~~~S~E~~lH~~iy~~-----~-dv~aVvH~H~~~~~a~a~~  145 (526)
                        +|+|   +++||.+|+   ++   ++. .+|        |+|+.+|+.||+.     | |++||+|+||+|++++|+.
T Consensus        83 ~~~p~d~~~iv~vd~dG~~~~~v~~~~~~-~~P--------SsE~~~H~~iy~~r~~~~rpd~~aVvHtHs~~~~a~s~~  153 (274)
T 2v9l_A           83 QLDPAANLGIVKVDSDGAGYHILWGLTNE-AVP--------TSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYV  153 (274)
T ss_dssp             TTCHHHHEEEEEECTTSSEEEEEEECTTT-CCB--------CTTHHHHHHHHHHHHHHTTTCCCEEEEECCHHHHHHTTT
T ss_pred             cCCHhhCCcEEEEeCCCCeeeeeeccCCC-CCC--------CHHHHHHHHHHHhcccccCCCCeEEEECCcHHHHHHHcc
Confidence              8998   999999998   55   443 344        9999999999997     8 9999999999999999998


Q ss_pred             cCCCC--cccccHH----HHHhhhcCCcccCccceeeecCC-CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHH
Q 009774          146 NPMSK--EFRITHM----EMIKGIKGHGYYDELVVPIIENT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWI  218 (526)
Q Consensus       146 ~~~~~--~~~~~~~----~~~~~~~g~~~~~~~~vpv~~~~-~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~  218 (526)
                      +. .+  .++...+    ++...+++       .||++||. |++.++++.+++.|++   .++|||+|||+++||+|++
T Consensus       154 ~~-l~~~~~~~~~~~~~~e~~~~~g~-------~v~v~~y~~~g~~ela~~i~~~l~~---~~avll~nHG~~~~G~~~~  222 (274)
T 2v9l_A          154 LE-NDTAVFTRQLWEGSTECLVVFPD-------GVGILPWMVPGTDAIGQATAQEMQK---HSLVLWPFHGVFGSGPTLD  222 (274)
T ss_dssp             SC-CCHHHHHHHHHHTSTTHHHHCTT-------CEEECCCCCSSSHHHHHHHHHHHTT---CSEEEETTTEEEEEESSHH
T ss_pred             Cc-cccccccchhhhcchHHHHHcCC-------ceeEecCCCCCCHHHHHHHHHHHcc---CCEEEEcCCCceEecCCHH
Confidence            74 22  1211111    11222221       39999995 7899999999999986   5999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccccccc
Q 009774          219 NAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLG  258 (526)
Q Consensus       219 eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~~  258 (526)
                      +||.+++.+|++|++++.++++|++...+++++++++...
T Consensus       223 eA~~~~e~lE~~a~i~~~a~~~g~~~~~l~~e~~~~~~~~  262 (274)
T 2v9l_A          223 ETFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKR  262 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTSCSSCCCCC-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            9999999999999999999999975555666688877653

>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}

Probab=100.00  E-value=2.1e-40  Score=326.18  Aligned_cols=215  Identities=16%  Similarity=0.128  Sum_probs=167.8

Q ss_pred             CcccchhhHHHHhhcc---HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCE
Q 009774           11 GAAAATHTQAYLEGRA---VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDM   87 (526)
Q Consensus        11 ~~~~~~~~~~~~~~~~---~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~di   87 (526)
                      ++|+|.+-...|..-+   .+++|++|++++|.++++||+.+ +||||+|++++     .+.||||||| .+++|+++||
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~~r~l~~~Gl~~~-~GNiSvR~~~~-----~~~~lItpsg-~~~~l~~~dl   91 (270)
T 2z7b_A           19 GSAAAVLEENLYFQGSFTMRRKVFEELVTATKILLNEGIMDT-FGHISARDPED-----PASFFLAQKL-APSLITVDDI   91 (270)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHTTCCCS-SCEEEEECTTC-----TTEEEEECSS-CGGGCCGGGE
T ss_pred             hhcccccchhhhhhccHHHHHHHHHHHHHHHHHHHHCCCcCC-ceeEEEEecCC-----CCEEEEeCCC-ChhhCCcccE
Confidence            4566655554444422   37889999999999999999997 89999999873     2589999998 6899999999


Q ss_pred             EEEeCCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCC
Q 009774           88 YVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGH  166 (526)
Q Consensus        88 v~vd~dg~~~~g~~~~p~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~  166 (526)
                      ++||+||+ ++|. .+|        |+|+.+|..||++| |++||+|+||+|+++||+.+...+++  . ++. ..+++ 
T Consensus        92 v~vd~dG~-~~g~-~~p--------SsE~~lH~~Iy~~rpdv~aVvHtHs~~a~a~s~~~~~l~~~--~-~~~-~~~g~-  156 (270)
T 2z7b_A           92 QRFNLDGE-TSDN-RPS--------YLERYIHSEIYKTRPDVQCVLHTHSPAVLPYCFVDTPLRPV--T-HMG-AFIGE-  156 (270)
T ss_dssp             EEEETTSC-CSCC-SCC--------CTTHHHHHHHHHHCTTCCEEEEECCTTTGGGGSSSSCCCCC--S-GGG-GGGCS-
T ss_pred             EEECCCCC-cCCC-CCC--------ChhHHHHHHHHHhCCCCeEEEeeCCHHHHHHHhcCCCCCCc--c-HHH-HHhCC-
Confidence            99999999 5443 344        99999999999999 99999999999999999987533222  2 222 22322 


Q ss_pred             cccCccceeeecCC----------CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHH
Q 009774          167 GYYDELVVPIIENT----------AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIK  236 (526)
Q Consensus       167 ~~~~~~~vpv~~~~----------~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~  236 (526)
                            .||+++|.          +++.++++.+++.|++   .++|||+|||+++||+|+++|+.+++.+|++|++++.
T Consensus       157 ------~vpv~~y~~~~g~~~~~~~~s~ela~~ia~~l~~---~~avLL~nHG~~~~G~tl~eA~~~~~~lE~~a~i~l~  227 (270)
T 2z7b_A          157 ------SVPVYEIRDKHGDETDLFGGSPDVCADIAESLGS---QTVVLMARHGVVNVGKSVREVVFRAFYLEQEAAALTA  227 (270)
T ss_dssp             ------CCCEECTHHHHCSCSCCCCCSHHHHHHHHHHHTT---SSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------CCceecccccCCcccccccCCHHHHHHHHHHhcc---CCEEEEcCCceEEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence                  39999863          3478999999999986   5899999999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCCCccccccc
Q 009774          237 LHQLGLDWSTPNHGPTRNFKL  257 (526)
Q Consensus       237 a~~~g~~~~~~~~~~~~~~~~  257 (526)
                      ++++|.+. ..++++++++..
T Consensus       228 a~~~G~~~-~l~~e~~~~~~~  247 (270)
T 2z7b_A          228 GLKIGNVK-YLSPGEIKTAGK  247 (270)
T ss_dssp             HHTTSCCC-CCCHHHHHHHTT
T ss_pred             HHhcCCCc-CCCHHHHHHHHH
Confidence            99999874 455557777655

>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1

Probab=100.00  E-value=8e-40  Score=317.67  Aligned_cols=202  Identities=17%  Similarity=0.237  Sum_probs=163.8

Q ss_pred             HHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCC--------------CCCccEEEEeccCCCCCCCC--CCCEEEEe
Q 009774           28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSI--------------PKPQQLILMSPSGVQKERME--PEDMYVLS   91 (526)
Q Consensus        28 ~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~--------------~~~~~~~litpsG~~~~~l~--~~div~vd   91 (526)
                      +++|++|++++|+|+++||+.+++||||+|+++++.              +.+.-.|||||||.+|++++  ++|+++|+
T Consensus         4 ~~~~~~l~~~~r~l~~~Gl~~~~~GNiS~R~~~~~~~~~~~~~~~~~~~~~~~~l~~lItpsG~~~~~l~~p~~dl~~v~   83 (238)
T 1pvt_A            4 RETIREIQKVAYWLAIKGLSEANAGNISVRLDERPEGYEVKSVNEYGFDYDGPEMYLLITATGSRMREVYEDDSKICLLH   83 (238)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSBTTBEEEEEEESSCCSSCCCCEEEEEEEEECSCCEEEEEEBTTCCHHHHTTCGGGEEEEE
T ss_pred             HHHHHHHHHHHHHHHHcCCcCCCCceEEEEcCCCcccccccccccccccccCcceEEEEcCCCCCHHhccCCcccEEEEE
Confidence            578999999999999999999999999999988410              00000799999999999999  79988888


Q ss_pred             CC----CCcccCCCCCCCCCCCCCCCCchHHHHHHHHh----c-CcceEEecCChHHHHHHhhcCCCCcc----cccHHH
Q 009774           92 GN----GTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEK----R-DAGAVIHSHGIESCLVTMINPMSKEF----RITHME  158 (526)
Q Consensus        92 ~d----g~~~~g~~~~p~~~~p~~~S~E~~lH~~iy~~----~-dv~aVvH~H~~~~~a~a~~~~~~~~~----~~~~~~  158 (526)
                      +|    |++++|.+ +|        |+|+.+|+.||+.    | |++||+|+||+|+++||+++. .+++    +....+
T Consensus        84 ~d~~~~g~~v~g~~-~P--------SsE~~~H~~iy~~~~~~rpd~~aVvHtHs~~~~a~s~~~~-l~~~~~~l~~~~~~  153 (238)
T 1pvt_A           84 VLPGKHYEILHGNG-KP--------TSEFPTHLMIHAKFKEMNPEKKAIVHTHPLNLLTLMNLEE-FQELLPKMMKIHPE  153 (238)
T ss_dssp             ECSEEEEEEEECSS-CB--------CTTHHHHHHHHHHHHHSCTTCCEEEEECCHHHHHHTTSGG-GTTTHHHHTTSSHH
T ss_pred             ecCCCCcceeCCCC-CC--------ChHHHHHHHHHHhhhccCCCceEEEecCcHHHHHHHhccc-chhhhccccccchH
Confidence            77    56887653 45        9999999999994    7 999999999999999999864 1211    111123


Q ss_pred             HHhhhcCCcccCccceeeecCC-CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHH
Q 009774          159 MIKGIKGHGYYDELVVPIIENT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKL  237 (526)
Q Consensus       159 ~~~~~~g~~~~~~~~vpv~~~~-~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a  237 (526)
                      ....+++       .||++||. |++.++++++++.|++   .++|||+|||+++||+|+++||.+++.+|++|++++.+
T Consensus       154 ~~~~~~~-------~v~~~~y~~~g~~ela~~i~~~l~~---~~avll~nHG~~~~G~~~~eA~~~~~~lE~~a~~~~~a  223 (238)
T 1pvt_A          154 VLIFFPQ-------GISVVEFEKPGSVELGLKTVEKSEG---KDAVLWDKHGVVAFGKDVAEAYDRVEILEKAAEILLRV  223 (238)
T ss_dssp             HHHHCSS-------CCEEECCCSTTCHHHHHHHHHHTSS---CSEEEETTSCEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCC-------CceEecCCCCCcHHHHHHHHHHhcc---CCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3322322       39999995 7899999999999975   59999999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCC
Q 009774          238 HQLGLDWSTPNH  249 (526)
Q Consensus       238 ~~~g~~~~~~~~  249 (526)
                      +++|++....++
T Consensus       224 ~~~g~~~~~l~~  235 (238)
T 1pvt_A          224 LSLGRNPTGVPE  235 (238)
T ss_dssp             HTTTCSCCC---
T ss_pred             HHcCCCCCCCCc
Confidence            999976555544

>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}

Probab=100.00  E-value=6.6e-37  Score=292.99  Aligned_cols=182  Identities=15%  Similarity=0.122  Sum_probs=145.5

Q ss_pred             HHHHHHHHHHHH-HcCCccccCCceEEEeCCCC-CCCCccEEEEeccCCCCCCCCCCCEEEEeCC---------------
Q 009774           31 RVLISELCRHFY-TLGWVSGTGGSITIKVHDDS-IPKPQQLILMSPSGVQKERMEPEDMYVLSGN---------------   93 (526)
Q Consensus        31 r~~l~~~~r~l~-~~gl~~~~~GNiSvR~~~~~-~~~~~~~~litpsG~~~~~l~~~div~vd~d---------------   93 (526)
                      .++++..++++. ++||+.+++||||+|+++.+ ...+.+.|||||||++|++|+++||++||++               
T Consensus        17 L~~~v~~~~~lg~~~~l~~~t~GNiSvR~~~~~~~g~~~~~~~ItpSG~~~~~l~~~dlv~vdl~~l~~~~~~~~~~~~~   96 (222)
T 3m4r_A           17 IDEVVYGSRLIGSDPDLVLHGGGNTSVKTTERDHAGRIISVLRVKNSGSNLGTIDSRGFTGIRMDDALAAAKIDKMTDEA   96 (222)
T ss_dssp             HHHHHHHHHHHHTCTTTCC-CCCEEEEEEEEECTTSCEEEEEEEEBTTSCGGGCCGGGEEEEEHHHHHHGGGCSCCCHHH
T ss_pred             HHHHHHHHHHhcccCCeeecCCCeEEEEeCCCccccCcCCEEEEeCCCCChhhCCHHHeEEEchhhhccccccccccchh
Confidence            456788888884 68999999999999997510 0111248999999999999999999999999               


Q ss_pred             ------CCcccCCCCCCCCCCCCCCCCchHHHHHHHHhcCcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCc
Q 009774           94 ------GTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHG  167 (526)
Q Consensus        94 ------g~~~~g~~~~p~~~~p~~~S~E~~lH~~iy~~~dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~  167 (526)
                            |+++++.+.+|        |+|+.+|..||+    +||+|+||+|+++||+++.   .++.    +...+ |  
T Consensus        97 ~~~~~~g~~v~~~~~~p--------SsE~~lH~~iy~----~aVvHtHs~~a~a~s~~~~---~l~~----~~~~~-g--  154 (222)
T 3m4r_A           97 MVDYLKKSMVNPSEPSP--------SVETFLHAFLPY----KFVMHSHADAILSITNTDL---PSDQ----IAKIL-G--  154 (222)
T ss_dssp             HHHHHHHTBSSTTSCCB--------CTTHHHHHTSCS----SEEEEECCHHHHHHHTSSC---CHHH----HHHHH-C--
T ss_pred             hccccCCccccCCCCCc--------chhHHHHHHHHh----CEEEEeCCHHHHHHHhCCC---cHHH----HHHHh-C--
Confidence                  78887653344        999999999998    7999999999999999875   3332    12222 2  


Q ss_pred             ccCccceeeecCC-CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 009774          168 YYDELVVPIIENT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL  242 (526)
Q Consensus       168 ~~~~~~vpv~~~~-~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~  242 (526)
                           .||++||. +++ ++++.+++.|+++  .+++||+|||+++||+|+++||.+++.+|++|++++.++++|.
T Consensus       155 -----~v~~~~y~~~g~-ela~~i~~~l~~~--~~avlL~nHG~~~~G~t~~eA~~~~~~lE~~a~~~l~a~~~G~  222 (222)
T 3m4r_A          155 -----NVVVLPYIPPGF-TLAKEVMNCFKKG--IDGIVLRKHGLLTFGDTGKEAYDRHINIVSRAENFIREKTDGK  222 (222)
T ss_dssp             -----SEEEECCCCSSH-HHHHHHHHHCCTT--CSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHC------
T ss_pred             -----CceecCCcCCcH-HHHHHHHHHHhcC--CCEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence                 29999985 566 9999999999853  4899999999999999999999999999999999999998874

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.97  E-value=3.1e-30  Score=254.18  Aligned_cols=241  Identities=46%  Similarity=0.760  Sum_probs=179.5

Q ss_pred             CCceEEEEeccccccccccccccchhhHHhhHHhhhhhhcCChhhHHHHHHHHHHhHHhhhhccCCccCCCC----CCCc
Q 009774          282 LFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPP----GDAG  357 (526)
Q Consensus       282 ~~ikaVlFD~DGTL~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  357 (526)
                      |++|+|+|||||||+|+++++..+++++.+.+..++...+........+..++.......  ...+....+.    +...
T Consensus         8 m~ikaviFDlDGTL~ds~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~l~~~~g~~~--~~~~~~~~~~~~~~~~~~   85 (261)
T 1yns_A            8 AEVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDA--HLDGAVPIPAASGNGVDD   85 (261)
T ss_dssp             TTCCEEEECCBTTTBCHHHHHHTHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHTT--TSTTCCCCCCCSCSSHHH
T ss_pred             cCCCEEEEecCCCccchhhHhhcchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcccc--ccccccccchhhcccccc
Confidence            479999999999999999888888999999999888777665544444444544322211  1111111010    0011


Q ss_pred             hHHHHHHHHHHHHHHHhhhhcchhhHhhhHHHHHHhhhcccccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHh
Q 009774          358 KEEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFG  437 (526)
Q Consensus       358 ~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~  437 (526)
                      ++.....+..++..++..+.+...++.+....|...|........++||+.++|+.|+++|++++|+||++...++.+++
T Consensus        86 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~  165 (261)
T 1yns_A           86 LQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFG  165 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHTTSCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHH
T ss_pred             cccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHhCCcccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHH
Confidence            22334555665555555555555566777777888887666667899999999999999999999999999999999998


Q ss_pred             hcCCCCcccccceEE-eCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCC--CC
Q 009774          438 NSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLP--EN  514 (526)
Q Consensus       438 ~l~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~--~~  514 (526)
                      ++...++.++|+.++ .+.. .||+|++|+++++++|++ |++|+||||+..|+.+|+++||.+|++.+++.....  ..
T Consensus       166 ~~~~~~l~~~fd~i~~~~~~-~KP~p~~~~~~~~~lg~~-p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~  243 (261)
T 1yns_A          166 HSTEGDILELVDGHFDTKIG-HKVESESYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEK  243 (261)
T ss_dssp             TBTTBCCGGGCSEEECGGGC-CTTCHHHHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHH
T ss_pred             hhcccChHhhccEEEecCCC-CCCCHHHHHHHHHHhCcC-cccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCccccccc
Confidence            663347999999998 4355 999999999999999997 999999999999999999999999999886443221  12


Q ss_pred             CCCeEecCCCCC
Q 009774          515 HGFKTINSFAEI  526 (526)
Q Consensus       515 ~~~~~i~~l~eL  526 (526)
                      .++.+++|+.||
T Consensus       244 ~~~~~i~~l~el  255 (261)
T 1yns_A          244 TYYSLITSFSEL  255 (261)
T ss_dssp             HHSCEESSGGGC
T ss_pred             CCCEEECCHHHh
Confidence            247899999876

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.96  E-value=1.1e-28  Score=242.01  Aligned_cols=216  Identities=36%  Similarity=0.625  Sum_probs=157.2

Q ss_pred             CCceEEEEeccccccccccccccchhhHHhhHHhhhhhhcCChhhHHHHHHHHHHhHHhhhhccCCccCCCCCCCchHHH
Q 009774          282 LFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEV  361 (526)
Q Consensus       282 ~~ikaVlFD~DGTL~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (526)
                      +++|+|+|||||||+|+.++...+++.+.+.+..++...+........+.    .              ..  ..+.+.+
T Consensus        29 ~~ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~--------------~~--g~~~~~~   88 (253)
T 2g80_A           29 DNYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILS----Q--------------FH--IDNKEQL   88 (253)
T ss_dssp             CCCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHHHHHHH----T--------------TC--CCCHHHH
T ss_pred             CCCcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhcCcHHHHHHHH----H--------------hh--hccHHHH
Confidence            45899999999999999876666667777777777765543322111111    0              00  0123333


Q ss_pred             HHHHHHHHHHHHhhhhcchhhHhhhHHHHHHhhhcccccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCC
Q 009774          362 IAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY  441 (526)
Q Consensus       362 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~  441 (526)
                      .+.+..    ++.........+.+....|+..|.......+++||+.++|+.    |++++|+||++...++.+++++..
T Consensus        89 ~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~  160 (253)
T 2g80_A           89 QAHILE----LVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQD  160 (253)
T ss_dssp             HHHHHH----HHHTTCCCHHHHHHHHHHHHHHHHTTSCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCC
T ss_pred             HHHHHH----HHhcccchHHHHHHHHHHHHHHHHhCcccCCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcc
Confidence            333333    333222223345555567888887666667899999999998    899999999999999998887632


Q ss_pred             C--------CcccccceEEeCCc-CCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCC
Q 009774          442 G--------DLRKYLSGFFDTAV-GNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLP  512 (526)
Q Consensus       442 ~--------gl~~~fd~i~~~~~-~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~  512 (526)
                      +        ++.++|+.+++... +.||+|++|+++++++|++ |++|+||||+..|+.+|+++||.+|++.+.+.....
T Consensus       161 g~~~~~~~l~l~~~~~~~f~~~~~g~KP~p~~~~~a~~~lg~~-p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~~~~  239 (253)
T 2g80_A          161 PNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRDIGAK-ASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVP  239 (253)
T ss_dssp             TTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCC
T ss_pred             cccccccccchHhhcceEEeeeccCCCCCHHHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCCCcc
Confidence            2        68888998885433 5699999999999999997 999999999999999999999999999986543322


Q ss_pred             CCCCCeEecCCCCC
Q 009774          513 ENHGFKTINSFAEI  526 (526)
Q Consensus       513 ~~~~~~~i~~l~eL  526 (526)
                      ...++.+|+||.||
T Consensus       240 ~~~~~~~i~~l~eL  253 (253)
T 2g80_A          240 DGQKYQVYKNFETL  253 (253)
T ss_dssp             SSCCSCEESCSTTC
T ss_pred             cccCCCccCChhhC
Confidence            22358899999986

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.95  E-value=2.5e-27  Score=225.19  Aligned_cols=102  Identities=25%  Similarity=0.272  Sum_probs=96.1

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      .+++||+.++|+.|+++|++++++||++...+...++.+   |+.++||.++  +..+..||+|++|+.+++++|++ |+
T Consensus        83 ~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~---~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~-p~  158 (216)
T 3kbb_A           83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRL---DLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVV-PE  158 (216)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT---TCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCC-GG
T ss_pred             cccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhc---CCCccccccccccccCCCcccHHHHHHHHHhhCCC-cc
Confidence            468999999999999999999999999999999999999   9999999998  55788999999999999999997 99


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEEE-EeCC
Q 009774          479 EILFVTDVYQEATAAKAAGLEVVI-SIRP  506 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i~-v~~~  506 (526)
                      +|+||||+..|+.+|+++||++|+ +.++
T Consensus       159 e~l~VgDs~~Di~aA~~aG~~~i~~v~~g  187 (216)
T 3kbb_A          159 KVVVFEDSKSGVEAAKSAGIERIYGVVHS  187 (216)
T ss_dssp             GEEEEECSHHHHHHHHHTTCCCEEEECCS
T ss_pred             ceEEEecCHHHHHHHHHcCCcEEEEecCC
Confidence            999999999999999999999996 5665

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.94  E-value=2.3e-26  Score=224.63  Aligned_cols=117  Identities=13%  Similarity=0.120  Sum_probs=102.0

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|+++|+++++.||+..  ....++++   |+.++||.++  ++....||+|++|+.+++++|++ |
T Consensus       114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L~~~---gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~-p  187 (250)
T 4gib_A          114 SNDILPGIESLLIDVKSNNIKIGLSSASKN--AINVLNHL---GISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVN-P  187 (250)
T ss_dssp             GGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHH---TCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCC-G
T ss_pred             ccccchhHHHHHHHHHhcccccccccccch--hhhHhhhc---ccccccceeecccccCCCCCcHHHHHHHHHHhCCC-h
Confidence            346899999999999999999999887754  45678999   9999999998  55788999999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      ++|+||||++.|+++|+++||++|++.+...   . ..++++|+++.||
T Consensus       188 ~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~---~-~~ad~vi~~l~eL  232 (250)
T 4gib_A          188 QNCIGIEDASAGIDAINSANMFSVGVGNYEN---L-KKANLVVDSTNQL  232 (250)
T ss_dssp             GGEEEEESSHHHHHHHHHTTCEEEEESCTTT---T-TTSSEEESSGGGC
T ss_pred             HHeEEECCCHHHHHHHHHcCCEEEEECChhH---h-ccCCEEECChHhC
Confidence            9999999999999999999999999965422   1 2348999999886

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.94  E-value=2e-26  Score=218.74  Aligned_cols=121  Identities=12%  Similarity=0.188  Sum_probs=106.6

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE-eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      ...++||+.++|+.|++ |++++|+||++...++.+++++   |+.++|+.++ .+ ...||+|++|+++++++|++ |+
T Consensus        82 ~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~---gl~~~f~~i~~~~-~~~Kp~p~~~~~~~~~lg~~-p~  155 (210)
T 2ah5_A           82 EAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNL---EIHHFFDGIYGSS-PEAPHKADVIHQALQTHQLA-PE  155 (210)
T ss_dssp             SCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHT---TCGGGCSEEEEEC-SSCCSHHHHHHHHHHHTTCC-GG
T ss_pred             CCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhc---CchhheeeeecCC-CCCCCChHHHHHHHHHcCCC-cc
Confidence            35799999999999999 9999999999999999999999   9999999988 44 77899999999999999997 99


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEEEEeCCCC-CCCC-CCCCCeEecCCCCC
Q 009774          479 EILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLP-ENHGFKTINSFAEI  526 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~-~~~~-~~~~~~~i~~l~eL  526 (526)
                      +|+||||+.+|+.+|+++|+.+|++.++.. .... ...++++++++.||
T Consensus       156 ~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el  205 (210)
T 2ah5_A          156 QAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEV  205 (210)
T ss_dssp             GEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHH
T ss_pred             cEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHH
Confidence            999999999999999999999999998733 2222 22358899998764

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.94  E-value=1.3e-25  Score=218.49  Aligned_cols=102  Identities=17%  Similarity=0.177  Sum_probs=93.8

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      ..++||+.++|+.|+++|++++++||+..  ...+++++   |+.++||.++  +++...||+|++|+++++++|++ |+
T Consensus        94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~---gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~-p~  167 (243)
T 4g9b_A           94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAAL---ELREFFTFCADASQLKNSKPDPEIFLAACAGLGVP-PQ  167 (243)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHT---TCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSC-GG
T ss_pred             ccccccHHHHHHhhhcccccceecccccc--hhhhhhhh---hhccccccccccccccCCCCcHHHHHHHHHHcCCC-hH
Confidence            36899999999999999999999999865  45678999   9999999998  56788999999999999999997 99


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEEEEeCCCC
Q 009774          479 EILFVTDVYQEATAAKAAGLEVVISIRPGN  508 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~  508 (526)
                      +|+||||+..|+.+|+++||++|+|.++.+
T Consensus       168 e~l~VgDs~~di~aA~~aG~~~I~V~~g~~  197 (243)
T 4g9b_A          168 ACIGIEDAQAGIDAINASGMRSVGIGAGLT  197 (243)
T ss_dssp             GEEEEESSHHHHHHHHHHTCEEEEESTTCC
T ss_pred             HEEEEcCCHHHHHHHHHcCCEEEEECCCCC
Confidence            999999999999999999999999998743

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.93  E-value=1.9e-24  Score=209.93  Aligned_cols=123  Identities=20%  Similarity=0.241  Sum_probs=108.9

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|+++|++++|+||++...++.+++.+   |+.++|+.++  +.....||+|++|..+++++|++ |
T Consensus       112 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~---gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~  187 (243)
T 2hsz_A          112 ISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAF---GIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLY-P  187 (243)
T ss_dssp             SCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT---TCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCC-G
T ss_pred             cCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHc---CchheEEEEEecccCCCCCcCHHHHHHHHHHhCcC-h
Confidence            4579999999999999999999999999999999999999   9999999988  44677899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCCC-CCCC-CCCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLP-ENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~-~~~~-~~~~~~~i~~l~eL  526 (526)
                      ++|+||||+.+|+.+|+++|+.++++.++.. .... ...++++++++.||
T Consensus       188 ~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el  238 (243)
T 2hsz_A          188 KQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADI  238 (243)
T ss_dssp             GGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGG
T ss_pred             hhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHH
Confidence            9999999999999999999999999998733 2222 23458999998875

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.92  E-value=5.2e-24  Score=204.09  Aligned_cols=121  Identities=17%  Similarity=0.181  Sum_probs=108.9

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++|++.++|+.|+ +|++++++||++....+..++.+   ++.++|+.++  +.....||+|++|+.+++++|++ |
T Consensus       105 ~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~-~  179 (240)
T 3qnm_A          105 KSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSA---GVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSE-L  179 (240)
T ss_dssp             CCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHH---TCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCC-G
T ss_pred             cCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHc---ChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCC-c
Confidence            4579999999999999 89999999999999999999999   9999999988  45778899999999999999997 9


Q ss_pred             CcEEEEecCH-hhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          478 SEILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      ++|++|||++ +|+.+|+++|+.+++++++.. ......++++++|+.|+
T Consensus       180 ~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~-~~~~~~~d~vi~sl~e~  228 (240)
T 3qnm_A          180 RESLMIGDSWEADITGAHGVGMHQAFYNVTER-TVFPFQPTYHIHSLKEL  228 (240)
T ss_dssp             GGEEEEESCTTTTHHHHHHTTCEEEEECCSCC-CCCSSCCSEEESSTHHH
T ss_pred             ccEEEECCCchHhHHHHHHcCCeEEEEcCCCC-CCcCCCCceEECCHHHH
Confidence            9999999996 999999999999999999854 23334569999999874

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.92  E-value=3.3e-24  Score=210.73  Aligned_cols=122  Identities=20%  Similarity=0.310  Sum_probs=106.5

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ..+++||+.++|+.|++ +++++|+||++...++.+++.+   |+..+|+.++  ++....||+|++|+.+++++|++ |
T Consensus       119 ~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~-~  193 (260)
T 2gfh_A          119 HMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEAC---ACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQ-P  193 (260)
T ss_dssp             TCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHH---TCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCC-G
T ss_pred             cCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhc---CHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCC-h
Confidence            45799999999999998 5999999999999999999999   9999999987  45677899999999999999997 9


Q ss_pred             CcEEEEecC-HhhHHHHHHcCC-cEEEEeCCCCCCC-CCCCCCeEecCCCCC
Q 009774          478 SEILFVTDV-YQEATAAKAAGL-EVVISIRPGNGPL-PENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs-~~Di~~A~~aG~-~~i~v~~~~~~~~-~~~~~~~~i~~l~eL  526 (526)
                      ++|+||||+ .+|+.+|+++|| .+|++.+++.... ....++++++++.||
T Consensus       194 ~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el  245 (260)
T 2gfh_A          194 GDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL  245 (260)
T ss_dssp             GGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGH
T ss_pred             hhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHH
Confidence            999999996 899999999999 7999987643322 233458999998874

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.92  E-value=3e-25  Score=214.84  Aligned_cols=123  Identities=11%  Similarity=0.154  Sum_probs=106.4

Q ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774          399 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK  476 (526)
Q Consensus       399 ~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~  476 (526)
                      ....++||+.++|+.|+++|++++|+||++...++..++.+   ++. +|+.++  +.....||+|++|+++++++|++ 
T Consensus       107 ~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~---~l~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~-  181 (240)
T 2hi0_A          107 IKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEEL---FPG-SFDFALGEKSGIRRKPAPDMTSECVKVLGVP-  181 (240)
T ss_dssp             SSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHH---STT-TCSEEEEECTTSCCTTSSHHHHHHHHHHTCC-
T ss_pred             hcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc---CCc-ceeEEEecCCCCCCCCCHHHHHHHHHHcCCC-
Confidence            34579999999999999999999999999999999999999   888 999988  45678999999999999999997 


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCC-CCC-CCCCCeEecCCCCC
Q 009774          477 PSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLP-ENHGFKTINSFAEI  526 (526)
Q Consensus       477 p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~-~~~-~~~~~~~i~~l~eL  526 (526)
                      |++|++|||+.+|+.+|+++|+.+|++.++... ... ...++++++++.||
T Consensus       182 ~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~el  233 (240)
T 2hi0_A          182 RDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKL  233 (240)
T ss_dssp             GGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHHH
T ss_pred             HHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHHH
Confidence            999999999999999999999999999887322 221 12347888887653

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.92  E-value=1.9e-24  Score=202.95  Aligned_cols=120  Identities=19%  Similarity=0.210  Sum_probs=108.8

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      .++||+.++|+.|+++|++++++||++...++..++.+   ++.++|+.++  +.....||+|+.|..+++++|++ |++
T Consensus        89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~-~~~  164 (214)
T 3e58_A           89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEEN---RLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQ-ASR  164 (214)
T ss_dssp             HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCC-GGG
T ss_pred             CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHc---CcHhheeeEeecccccCCCCChHHHHHHHHHcCCC-hHH
Confidence            68999999999999999999999999999999999999   9999999988  45778899999999999999997 999


Q ss_pred             EEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          480 ILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      |++|||+.+|+.+|+++|+.++++++++..... ..++++++++.||
T Consensus       165 ~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~-~~a~~~~~~~~el  210 (214)
T 3e58_A          165 ALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQ-SAAKGLLDSLTDV  210 (214)
T ss_dssp             EEEEECSHHHHHHHHHTTCEEEEECCSSSCCCC-TTSSEEESSGGGG
T ss_pred             eEEEeccHhhHHHHHHCCCEEEEECCCCccchh-ccHHHHHHHHHHH
Confidence            999999999999999999999999987443322 4458999999875

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.92  E-value=1.9e-23  Score=200.13  Aligned_cols=121  Identities=15%  Similarity=0.201  Sum_probs=109.4

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcC-CCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLG-VDKP  477 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~-~~~p  477 (526)
                      ..++||+.++|+.|+++ ++++++||++...++..++.+   |+..+|+.++  +.....||+|++|+.+++++| ++ |
T Consensus       102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~-~  176 (238)
T 3ed5_A          102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDS---GLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFS-A  176 (238)
T ss_dssp             CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHT---TCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCC-G
T ss_pred             CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHc---ChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCC-h
Confidence            57999999999999999 999999999999999999999   9999999988  457789999999999999999 97 9


Q ss_pred             CcEEEEecCH-hhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          478 SEILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      ++|++|||+. +|+.+|+++|+.+|++.++.........++++++++.||
T Consensus       177 ~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el  226 (238)
T 3ed5_A          177 EHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEEL  226 (238)
T ss_dssp             GGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGH
T ss_pred             hHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHH
Confidence            9999999998 999999999999999998754444444569999999875

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.91  E-value=2.8e-24  Score=206.50  Aligned_cols=123  Identities=20%  Similarity=0.234  Sum_probs=109.1

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|+++|++++++||++...++..++.+   |+.++|+.++  +.....||+|++|+.+++++|++ |
T Consensus       102 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~-~  177 (237)
T 4ex6_A          102 PRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELT---GLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIP-P  177 (237)
T ss_dssp             GGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHH---TGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCC-G
T ss_pred             CCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc---CchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCC-H
Confidence            3469999999999999999999999999999999999999   9999999998  45778999999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCC-CCCC-CCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLPE-NHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~-~~~~-~~~~~~i~~l~eL  526 (526)
                      ++|++|||+.+|+.+|+++|+.+|++.++.+. .... ..++++++++.||
T Consensus       178 ~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el  228 (237)
T 4ex6_A          178 ERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAA  228 (237)
T ss_dssp             GGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHH
T ss_pred             HHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHH
Confidence            99999999999999999999999999988432 2222 2458999988764

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.91  E-value=9.5e-24  Score=204.95  Aligned_cols=123  Identities=14%  Similarity=0.167  Sum_probs=108.2

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhh-cCCCCcccccceEE--e--CCcCCCCCHHHHHHHHHHcCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN-SNYGDLRKYLSGFF--D--TAVGNKRETPSYVEITNSLGV  474 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~-l~~~gl~~~fd~i~--~--~~~~~KP~p~~~~~~~~~l~~  474 (526)
                      ...++||+.++|+.|+++|++++|+||++.......+.. +   ++.++|+.++  +  .....||+|++|+.+++++|+
T Consensus       110 ~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~---~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi  186 (250)
T 3l5k_A          110 TAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHK---EFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSP  186 (250)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCH---HHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSS
T ss_pred             cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhcc---CHHhheeeEEecchhhccCCCCChHHHHHHHHHcCC
Confidence            467999999999999999999999999998877776644 6   8899999988  4  567899999999999999999


Q ss_pred             CCC--CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          475 DKP--SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       475 ~~p--~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      + |  ++|++|||+.+|+.+|+++|+.++++.++.........++++++++.||
T Consensus       187 ~-~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el  239 (250)
T 3l5k_A          187 P-PAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDF  239 (250)
T ss_dssp             C-CCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGC
T ss_pred             C-CCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHh
Confidence            7 8  9999999999999999999999999999854444445569999999886

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.91  E-value=7.1e-24  Score=202.82  Aligned_cols=123  Identities=20%  Similarity=0.212  Sum_probs=109.2

Q ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774          399 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK  476 (526)
Q Consensus       399 ~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~  476 (526)
                      ....++||+.++|+.|+++|++++|+||++...++..++.+   |+.++|+.++  +.....||+|++|..+++++|++ 
T Consensus        80 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~-  155 (222)
T 2nyv_A           80 VYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDIL---NLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEE-  155 (222)
T ss_dssp             SSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT---TCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCC-
T ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---CCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCC-
Confidence            35689999999999999999999999999999999999999   9999999998  45677899999999999999997 


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          477 PSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       477 p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      |++|+||||+.+|+.+|+++|+.+|++.++...... ..++++++++.||
T Consensus       156 ~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el  204 (222)
T 2nyv_A          156 PEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDL  204 (222)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHH
T ss_pred             chhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHH
Confidence            999999999999999999999999999987433222 4458999998764

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.91  E-value=1.4e-23  Score=200.18  Aligned_cols=123  Identities=28%  Similarity=0.269  Sum_probs=110.3

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|+++|++++++||++....+..++.+   ++..+|+.++  +.....||+|+.|..+++++|++ |
T Consensus        94 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~-~  169 (230)
T 3um9_A           94 SLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNS---GLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLG-E  169 (230)
T ss_dssp             SCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH---TCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCC-G
T ss_pred             cCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHC---CChhhcceeEehhhcccCCCChHHHHHHHHHhCCC-c
Confidence            4579999999999999999999999999999999999999   9999999988  45778899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCC-CCCCCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGP-LPENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~-~~~~~~~~~i~~l~eL  526 (526)
                      ++|++|||+.+|+.+|+++|+.+++++++++.. .....++++++|+.||
T Consensus       170 ~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  219 (230)
T 3um9_A          170 SEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVL  219 (230)
T ss_dssp             GGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHH
T ss_pred             ccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHH
Confidence            999999999999999999999999999985443 3334558999998764

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.91  E-value=1.7e-23  Score=201.92  Aligned_cols=122  Identities=29%  Similarity=0.328  Sum_probs=110.0

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      ..++||+.++|+.|+++|++++++||++...++..++.+   |+..+|+.++  +.....||+|++|+.+++++|++ |+
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~~  179 (240)
T 2no4_A          104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKAS---KLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVN-PN  179 (240)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCC-GG
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhc---CcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCC-cc
Confidence            579999999999999999999999999999999999999   9999999988  45778899999999999999997 99


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCC-CeEecCCCCC
Q 009774          479 EILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG-FKTINSFAEI  526 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~-~~~i~~l~eL  526 (526)
                      +|++|||+.+|+.+|+++|+.++++.++...+.....+ +++++++.||
T Consensus       180 ~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~el  228 (240)
T 2no4_A          180 EVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSEL  228 (240)
T ss_dssp             GEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESSGGGH
T ss_pred             cEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeCCHHHH
Confidence            99999999999999999999999999885433334456 8899998874

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.91  E-value=1.2e-23  Score=198.46  Aligned_cols=121  Identities=14%  Similarity=0.156  Sum_probs=107.7

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|+++ ++++|+||++...++..++.+   |+.++|+.++  +.....||+|+.|..+++++|++ |
T Consensus        81 ~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~-~  155 (209)
T 2hdo_A           81 QIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSY---PFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVA-P  155 (209)
T ss_dssp             GCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTS---GGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCC-G
T ss_pred             cCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHc---ChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCC-c
Confidence            457999999999999999 999999999999999999999   9999999988  44677899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCCC-CCCCCCCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLPENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~-~~~~~~~~~~~i~~l~eL  526 (526)
                      ++|++|||+.+|+.+|+++|+.+++++++.. ...... ++++++++.||
T Consensus       156 ~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~~~el  204 (209)
T 2hdo_A          156 QNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQKPLDI  204 (209)
T ss_dssp             GGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESSGGGG
T ss_pred             ccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCCHHHH
Confidence            9999999999999999999999999998732 333333 68999998875

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.91  E-value=2.9e-23  Score=198.58  Aligned_cols=123  Identities=16%  Similarity=0.192  Sum_probs=110.4

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|+++|++++++||++....+..++.+   |+.++|+.++  +.....||+|++|..+++++|++ |
T Consensus        97 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~-~  172 (233)
T 3umb_A           97 CLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSA---GMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVP-A  172 (233)
T ss_dssp             SCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTT---TCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSC-G
T ss_pred             cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHC---CcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCC-c
Confidence            3579999999999999999999999999999999999999   9999999988  45778899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCC-CCCCCCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLPENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~-~~~~~~~~~~i~~l~eL  526 (526)
                      ++|++|||+.+|+.+|+++|+.++++.++++. +.....++++++|+.||
T Consensus       173 ~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el  222 (233)
T 3umb_A          173 AQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDL  222 (233)
T ss_dssp             GGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHH
T ss_pred             ccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHH
Confidence            99999999999999999999999999998544 33344569999998764

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.90  E-value=4.2e-24  Score=204.02  Aligned_cols=124  Identities=15%  Similarity=0.088  Sum_probs=109.1

Q ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774          399 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK  476 (526)
Q Consensus       399 ~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~  476 (526)
                      ....++||+.++|+.|+++|++++++||++...++..++.+   ++..+|+.++  +.....||+|+.|+.+++++|++ 
T Consensus        88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~-  163 (233)
T 3s6j_A           88 HQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKAL---KLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAP-  163 (233)
T ss_dssp             GGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTT---TCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCC-
T ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhc---chhhhhheeeccccCCCCCCChHHHHHHHHHhCCC-
Confidence            34679999999999999999999999999999999999999   9999999988  45777999999999999999997 


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCcEEEEeCCCC-CCCCCC-CCCeEecCCCCC
Q 009774          477 PSEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLPEN-HGFKTINSFAEI  526 (526)
Q Consensus       477 p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~-~~~~~~-~~~~~i~~l~eL  526 (526)
                      |++|++|||+.+|+.+|+++|+.+|++.++.+ ...... .++++++++.||
T Consensus       164 ~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el  215 (233)
T 3s6j_A          164 IDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDL  215 (233)
T ss_dssp             GGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHH
T ss_pred             HHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHH
Confidence            99999999999999999999999999998733 222222 258899888764

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.90  E-value=2.5e-23  Score=198.97  Aligned_cols=122  Identities=15%  Similarity=0.169  Sum_probs=108.8

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++|++.++|+.|+++ ++++++||++....+..++.+   |+..+|+.++  +.....||+|++|..+++++|++ |
T Consensus        98 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~---~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~-~  172 (234)
T 3u26_A           98 YGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDAL---GIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVK-G  172 (234)
T ss_dssp             HCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCC-G
T ss_pred             hCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHc---CcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCC-c
Confidence            347999999999999999 999999999999999999999   9999999988  44677899999999999999997 9


Q ss_pred             CcEEEEecCH-hhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          478 SEILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      ++|++|||+. +|+.+|+++|+.++++.+++........++++++|+.||
T Consensus       173 ~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el  222 (234)
T 3u26_A          173 EEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV  222 (234)
T ss_dssp             GGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHH
T ss_pred             hhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCCHHHH
Confidence            9999999998 999999999999999999855443333558999998764

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.90  E-value=2.5e-23  Score=201.79  Aligned_cols=120  Identities=16%  Similarity=0.165  Sum_probs=103.8

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++|++.++|+.|++. ++++++||++...+...++.+   |+.  |+.++  +.....||+|++|+++++++|++ |
T Consensus       118 ~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~---g~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~-~  190 (254)
T 3umc_A          118 RLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHA---GLP--WDMLLCADLFGHYKPDPQVYLGACRLLDLP-P  190 (254)
T ss_dssp             SCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHH---TCC--CSEECCHHHHTCCTTSHHHHHHHHHHHTCC-G
T ss_pred             cCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHc---CCC--cceEEeecccccCCCCHHHHHHHHHHcCCC-h
Confidence            457899999999999986 999999999999999999999   775  89887  45678999999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCC-----CCCCCC--CCCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRP-----GNGPLP--ENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~-----~~~~~~--~~~~~~~i~~l~eL  526 (526)
                      ++|++|||+.+|+.+|+++|+.+++++++     +..+..  ...++++++|+.||
T Consensus       191 ~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el  246 (254)
T 3umc_A          191 QEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDL  246 (254)
T ss_dssp             GGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHH
T ss_pred             HHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHH
Confidence            99999999999999999999999999943     222233  33459999998764

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.90  E-value=6.1e-23  Score=195.94  Aligned_cols=118  Identities=16%  Similarity=0.196  Sum_probs=103.6

Q ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774          399 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK  476 (526)
Q Consensus       399 ~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~  476 (526)
                      ....++||+.++|+.|+++ ++++++||++..     ++.+   ++.++|+.++  +.....||+|++|+.+++++|++ 
T Consensus       102 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~-  171 (230)
T 3vay_A          102 HQVQIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRL---GLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVD-  171 (230)
T ss_dssp             TCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGS---TTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCC-
T ss_pred             ccCccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhc---CcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCC-
Confidence            3567999999999999998 999999999865     6777   9999999988  44778899999999999999997 


Q ss_pred             CCcEEEEecCH-hhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          477 PSEILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       477 p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      |++|++|||+. +|+.+|+++|+.++++.+++........++++++++.||
T Consensus       172 ~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el  222 (230)
T 3vay_A          172 ASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQL  222 (230)
T ss_dssp             GGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGH
T ss_pred             chheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHH
Confidence            99999999998 999999999999999999854433344559999999875

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.90  E-value=4.8e-24  Score=208.20  Aligned_cols=124  Identities=19%  Similarity=0.198  Sum_probs=108.5

Q ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccce-EE--eCCc-CCCCCHHHHHHHHHHcCC
Q 009774          399 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSG-FF--DTAV-GNKRETPSYVEITNSLGV  474 (526)
Q Consensus       399 ~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~-i~--~~~~-~~KP~p~~~~~~~~~l~~  474 (526)
                      ....++||+.++|+.|+++|++++|+||++...++..++.+   |+.++|+. ++  +... ..||+|++|+.+++++|+
T Consensus       107 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi  183 (259)
T 4eek_A          107 TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVA---GLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGI  183 (259)
T ss_dssp             TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHT---TCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTC
T ss_pred             ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhc---ChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCC
Confidence            34579999999999999999999999999999999999999   99999999 77  4566 899999999999999999


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCC-----CCC-CCCCCeEecCCCCC
Q 009774          475 DKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-----PLP-ENHGFKTINSFAEI  526 (526)
Q Consensus       475 ~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~-----~~~-~~~~~~~i~~l~eL  526 (526)
                      + |++|++|||+.+|+.+|+++|+.+|++.++...     ... ...++++++++.||
T Consensus       184 ~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el  240 (259)
T 4eek_A          184 L-PERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAEL  240 (259)
T ss_dssp             C-GGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHH
T ss_pred             C-HHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHH
Confidence            7 999999999999999999999999999987332     111 12348999988764

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.90  E-value=4.1e-23  Score=197.80  Aligned_cols=123  Identities=25%  Similarity=0.304  Sum_probs=108.7

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|+++|++++++||++...++..++.+   ++..+|+.++  +.....||+|++|+.+++++|++ |
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~  168 (232)
T 1zrn_A           93 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHA---GLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLD-R  168 (232)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSC-G
T ss_pred             cCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhc---ChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCC-c
Confidence            3579999999999999999999999999999999999999   9999999988  44677899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCC-CCCCCCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLPENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~-~~~~~~~~~~i~~l~eL  526 (526)
                      ++|++|||+.+|+.+|+++|+.++++.++++. +.....++++++++.||
T Consensus       169 ~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  218 (232)
T 1zrn_A          169 SAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV  218 (232)
T ss_dssp             GGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHH
T ss_pred             ccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHH
Confidence            99999999999999999999999999987443 22333458899887653

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.90  E-value=4.5e-23  Score=202.58  Aligned_cols=121  Identities=18%  Similarity=0.215  Sum_probs=105.8

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      ..++||+.++|+.|+++|++++|+||++.. +..+++.+   |+.++|+.++  +.....||+|++|+.+++++|++ |+
T Consensus       105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~---gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~-~~  179 (263)
T 3k1z_A          105 WQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGL---GLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHME-PV  179 (263)
T ss_dssp             EEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHT---TCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCC-GG
T ss_pred             ceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhC---CcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCC-HH
Confidence            479999999999999999999999998875 57889999   9999999998  45778999999999999999997 99


Q ss_pred             cEEEEecCH-hhHHHHHHcCCcEEEEeCCCCCCC---CCCCCCeEecCCCCC
Q 009774          479 EILFVTDVY-QEATAAKAAGLEVVISIRPGNGPL---PENHGFKTINSFAEI  526 (526)
Q Consensus       479 ~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~~~---~~~~~~~~i~~l~eL  526 (526)
                      +|+||||++ +|+.+|+++|+.+++++++.....   ....++++++++.||
T Consensus       180 ~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el  231 (263)
T 3k1z_A          180 VAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHL  231 (263)
T ss_dssp             GEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGH
T ss_pred             HEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHH
Confidence            999999997 999999999999999998853321   112348999998874

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.90  E-value=1.4e-22  Score=193.80  Aligned_cols=121  Identities=20%  Similarity=0.192  Sum_probs=102.3

Q ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHH---HHHcC
Q 009774          399 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEI---TNSLG  473 (526)
Q Consensus       399 ~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~---~~~l~  473 (526)
                      ....++||+.++|+.|++ |++++++||++.......++.+     ..+|+.++  ++....||+|++|..+   ++++|
T Consensus        96 ~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l-----~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lg  169 (240)
T 3smv_A           96 KNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKL-----GVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAG  169 (240)
T ss_dssp             GGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTT-----CSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTT
T ss_pred             hcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhc-----CCccCEEEEccccCCCCCCHHHHHHHHHHHHhcC
Confidence            355799999999999999 8999999999999888888765     47899988  4577889999999999   89999


Q ss_pred             CCCCCcEEEEecCH-hhHHHHHHcCCcEEEEeCC------CCC--CCCCCCCCeEecCCCCC
Q 009774          474 VDKPSEILFVTDVY-QEATAAKAAGLEVVISIRP------GNG--PLPENHGFKTINSFAEI  526 (526)
Q Consensus       474 ~~~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~------~~~--~~~~~~~~~~i~~l~eL  526 (526)
                      ++ |++|++|||+. +|+.+|+++|+.+++++++      ++.  ......++++++|+.||
T Consensus       170 i~-~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el  230 (240)
T 3smv_A          170 IE-KKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEM  230 (240)
T ss_dssp             CC-GGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHH
T ss_pred             CC-chhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHH
Confidence            97 99999999997 9999999999999999875      222  22234459999998764

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.90  E-value=1.8e-22  Score=192.19  Aligned_cols=121  Identities=19%  Similarity=0.251  Sum_probs=104.3

Q ss_pred             ccCccCCCHHHHHHHHHHCC-CeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          399 LEGEVFDDVPEALEKWHSLG-TKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       399 ~~~~l~pgv~~~L~~L~~~G-~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ....++||+.++|+.|+++| ++++++||++.......++.+   ++.++|+.++.   ..||+|+.|+.+++++|++ |
T Consensus       102 ~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~---~~~~~f~~~~~---~~kpk~~~~~~~~~~lgi~-~  174 (234)
T 3ddh_A          102 MPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERS---GLSPYFDHIEV---MSDKTEKEYLRLLSILQIA-P  174 (234)
T ss_dssp             CCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHH---TCGGGCSEEEE---ESCCSHHHHHHHHHHHTCC-G
T ss_pred             ccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHh---CcHhhhheeee---cCCCCHHHHHHHHHHhCCC-c
Confidence            34579999999999999999 999999999999999999999   99999999873   4699999999999999997 9


Q ss_pred             CcEEEEecCH-hhHHHHHHcCCcEEEEeCC----CCCCCCCCCC-CeEecCCCCC
Q 009774          478 SEILFVTDVY-QEATAAKAAGLEVVISIRP----GNGPLPENHG-FKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~----~~~~~~~~~~-~~~i~~l~eL  526 (526)
                      ++|++|||+. +|+.+|+++|+.++++.++    .........+ +++++|+.||
T Consensus       175 ~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el  229 (234)
T 3ddh_A          175 SELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDL  229 (234)
T ss_dssp             GGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGH
T ss_pred             ceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHH
Confidence            9999999997 9999999999999999554    2222223334 8999999875

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.89  E-value=4.5e-23  Score=202.40  Aligned_cols=123  Identities=15%  Similarity=0.085  Sum_probs=108.4

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccc-cceEE--eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFF--DTAVGNKRETPSYVEITNSLGVDK  476 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~-fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~  476 (526)
                      ...++||+.++|+.|+++|++++++||++....+..++.+   ++.++ |+.++  +.....||+|.+|..+++++|++ 
T Consensus       109 ~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~-  184 (277)
T 3iru_A          109 RSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAA---KEQGYTPASTVFATDVVRGRPFPDMALKVALELEVG-  184 (277)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH---HHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCS-
T ss_pred             cCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhc---CcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCC-
Confidence            3579999999999999999999999999999999999999   88888 89888  45777899999999999999997 


Q ss_pred             C-CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCC------------------------CCC-CCCCCeEecCCCCC
Q 009774          477 P-SEILFVTDVYQEATAAKAAGLEVVISIRPGNG------------------------PLP-ENHGFKTINSFAEI  526 (526)
Q Consensus       477 p-~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~------------------------~~~-~~~~~~~i~~l~eL  526 (526)
                      | ++|++|||+.+|+.+|+++|+.+|+|.++.+.                        ... ...++++++++.||
T Consensus       185 ~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el  260 (277)
T 3iru_A          185 HVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVIDSVADL  260 (277)
T ss_dssp             CGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEESSGGGT
T ss_pred             CCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEecCHHHH
Confidence            9 99999999999999999999999999998431                        111 12358999999886

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.89  E-value=7.4e-23  Score=197.79  Aligned_cols=121  Identities=16%  Similarity=0.160  Sum_probs=103.8

Q ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774          399 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK  476 (526)
Q Consensus       399 ~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~  476 (526)
                      ....++|++.++|+.|+++ ++++++||++....+..++.+   |+.  |+.++  +.....||+|..|..+++++|++ 
T Consensus       113 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~---~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~-  185 (254)
T 3umg_A          113 HVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNA---GIP--WDVIIGSDINRKYKPDPQAYLRTAQVLGLH-  185 (254)
T ss_dssp             GSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHH---TCC--CSCCCCHHHHTCCTTSHHHHHHHHHHTTCC-
T ss_pred             hhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhC---CCC--eeEEEEcCcCCCCCCCHHHHHHHHHHcCCC-
Confidence            3457899999999999997 999999999999999999999   775  88877  45678999999999999999997 


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCcEEEEeCCC-----CCCCC--CCCCCeEecCCCCC
Q 009774          477 PSEILFVTDVYQEATAAKAAGLEVVISIRPG-----NGPLP--ENHGFKTINSFAEI  526 (526)
Q Consensus       477 p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~-----~~~~~--~~~~~~~i~~l~eL  526 (526)
                      |++|++|||+.+|+.+|+++|+.++++++++     .....  ...++++++|+.||
T Consensus       186 ~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el  242 (254)
T 3umg_A          186 PGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDL  242 (254)
T ss_dssp             GGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHH
T ss_pred             hHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHH
Confidence            9999999999999999999999999999432     22222  23448999998764

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.89  E-value=1.8e-23  Score=199.17  Aligned_cols=123  Identities=14%  Similarity=0.142  Sum_probs=109.1

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|+++|++++++||++...++..++.+   ++.++|+.++  +.....||+|+.|+.+++++|++ |
T Consensus        84 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~-~  159 (226)
T 3mc1_A           84 ENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHF---KLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIK-S  159 (226)
T ss_dssp             SCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHT---TCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCC-G
T ss_pred             cCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh---CCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcC-c
Confidence            4579999999999999999999999999999999999999   9999999988  55778899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCC-CCC-CCCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLP-ENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~-~~~-~~~~~~~i~~l~eL  526 (526)
                      ++|++|||+.+|+.+|+++|+.+|++.++... ... ...++++++|+.||
T Consensus       160 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el  210 (226)
T 3mc1_A          160 DDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDEL  210 (226)
T ss_dssp             GGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHH
T ss_pred             ccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHH
Confidence            99999999999999999999999999987432 222 23458999988764

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.89  E-value=1.5e-22  Score=195.47  Aligned_cols=122  Identities=16%  Similarity=0.172  Sum_probs=106.6

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      ..++||+.++|+.|+++|++++|+||++...++..++.+   |+..+|+.++  +.....||+|++|+++++++|++ |+
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~-~~  168 (241)
T 2hoq_A           93 LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRL---ELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVK-PE  168 (241)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHT---TCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCC-GG
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHc---CcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCC-cc
Confidence            468999999999999999999999999999999999999   9999999988  45677899999999999999997 99


Q ss_pred             cEEEEecCH-hhHHHHHHcCCcEEEEeCCCCCC-CC--CCCCCeEecCCCCC
Q 009774          479 EILFVTDVY-QEATAAKAAGLEVVISIRPGNGP-LP--ENHGFKTINSFAEI  526 (526)
Q Consensus       479 ~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~~-~~--~~~~~~~i~~l~eL  526 (526)
                      +|++|||+. +|+.+|+++|+.++++.++.... ..  ...++++++++.||
T Consensus       169 ~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el  220 (241)
T 2hoq_A          169 EALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESL  220 (241)
T ss_dssp             GEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHH
T ss_pred             cEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHH
Confidence            999999998 99999999999999997663221 11  12458899998764

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.89  E-value=2.8e-23  Score=195.64  Aligned_cols=121  Identities=15%  Similarity=0.174  Sum_probs=107.5

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc--ceEE-eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--SGFF-DTAVGNKRETPSYVEITNSLGVDK  476 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f--d~i~-~~~~~~KP~p~~~~~~~~~l~~~~  476 (526)
                      ...++||+.++|+.|+++|++++++||++...++..++.+   |+.++|  +.++ .+....||+|+.|+.+++++|++ 
T Consensus        68 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~-  143 (205)
T 3m9l_A           68 GSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAI---GLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVS-  143 (205)
T ss_dssp             EEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT---TCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCC-
T ss_pred             cCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHc---CchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCC-
Confidence            3479999999999999999999999999999999999999   999999  7787 34577899999999999999997 


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          477 PSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       477 p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      |++|++|||+.+|+.+|+++|+.+|++.++...  ....++++++|+.||
T Consensus       144 ~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~--~~~~ad~v~~~~~el  191 (205)
T 3m9l_A          144 PSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNP--WPELTDWHARDCAQL  191 (205)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEECSSSSCS--CGGGCSEECSSHHHH
T ss_pred             HHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCc--ccccCCEEeCCHHHH
Confidence            999999999999999999999999999987532  223458999988764

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.89  E-value=1.2e-22  Score=194.35  Aligned_cols=120  Identities=16%  Similarity=0.177  Sum_probs=104.7

Q ss_pred             cccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCC
Q 009774          398 ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVD  475 (526)
Q Consensus       398 ~~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~  475 (526)
                      .....++||+.++|+.|+++|++++++||++....+..++.+   |+.++|+.++  +.....||+|+.|+.+++++|++
T Consensus        99 ~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~  175 (231)
T 3kzx_A           99 SDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHK---NLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIE  175 (231)
T ss_dssp             CCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT---TCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCC
T ss_pred             cccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHC---CchhheeeEEcccccCCCCCChHHHHHHHHHcCCC
Confidence            345689999999999999999999999999999999999999   9999999988  45778999999999999999997


Q ss_pred             CCC-cEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          476 KPS-EILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       476 ~p~-~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                       |+ +|++|||+.+|+.+|+++|+.+|++.++..     ..++.+++++.||
T Consensus       176 -~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~-----~~~~~~~~~~~el  221 (231)
T 3kzx_A          176 -PSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI-----IKDILSFKNFYDI  221 (231)
T ss_dssp             -CSTTEEEEESSHHHHHHHHHTTCEEEEECC----------CCEEESSHHHH
T ss_pred             -cccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC-----CCCceeeCCHHHH
Confidence             98 999999999999999999999999965532     2236788887664

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.89  E-value=3.5e-22  Score=190.73  Aligned_cols=121  Identities=22%  Similarity=0.282  Sum_probs=107.0

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCch---HHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK  476 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~---~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~  476 (526)
                      .++|++.++|+.|+++|++++++||++   ...++..++.+   ++.++|+.++  +.....||+|++|..+++++|++ 
T Consensus        99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~-  174 (235)
T 2om6_A           99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERF---GLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVK-  174 (235)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHT---TCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCC-
T ss_pred             CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhC---CcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCC-
Confidence            469999999999999999999999999   88888999999   9999999988  45677899999999999999997 


Q ss_pred             CCcEEEEecCH-hhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          477 PSEILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       477 p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      |++|++|||+. +|+.+|+++|+.++++++++........++++++++.||
T Consensus       175 ~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el  225 (235)
T 2om6_A          175 PEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANL  225 (235)
T ss_dssp             GGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGH
T ss_pred             ccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHH
Confidence            99999999999 999999999999999998853333223357889998874

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.89  E-value=4.5e-23  Score=197.50  Aligned_cols=115  Identities=14%  Similarity=0.131  Sum_probs=92.7

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      .++||+.++|+.|+++|++++|+||++.  ....++.+   |+.++|+.++  +.....||+|++|+.+++++|++ |++
T Consensus        92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~---gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~-~~~  165 (233)
T 3nas_A           92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRL---AIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVS-PAD  165 (233)
T ss_dssp             GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHT---TCTTTCSEECCC---------CCHHHHHHHHHTSC-GGG
T ss_pred             CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHc---CcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCC-HHH
Confidence            4899999999999999999999999865  67789999   9999999988  45678899999999999999997 999


Q ss_pred             EEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          480 ILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      |++|||+.+|+.+|+++|+.++++++...   .. .++++++++.||
T Consensus       166 ~i~vGDs~~Di~~a~~aG~~~~~~~~~~~---~~-~ad~v~~s~~el  208 (233)
T 3nas_A          166 CAAIEDAEAGISAIKSAGMFAVGVGQGQP---ML-GADLVVRQTSDL  208 (233)
T ss_dssp             EEEEECSHHHHHHHHHTTCEEEECC-----------CSEECSSGGGC
T ss_pred             EEEEeCCHHHHHHHHHcCCEEEEECCccc---cc-cCCEEeCChHhC
Confidence            99999999999999999999999976422   22 458999998875

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.89  E-value=1.4e-23  Score=202.94  Aligned_cols=122  Identities=13%  Similarity=0.087  Sum_probs=103.9

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc--ceEE--eCCcCCCCCHHHHHHHHHHcCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--SGFF--DTAVGNKRETPSYVEITNSLGVD  475 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f--d~i~--~~~~~~KP~p~~~~~~~~~l~~~  475 (526)
                      ...++||+.++|+.|+++|++++++||++.......++.    ++.++|  +.++  +.....||+|++|+.+++++|++
T Consensus       107 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~----~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~  182 (243)
T 3qxg_A          107 EAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH----NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLK  182 (243)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH----HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCC
T ss_pred             cCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH----hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCC
Confidence            457999999999999999999999999998777666664    577899  8888  45778899999999999999997


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCC-CC-CCCCCeEecCCCCC
Q 009774          476 KPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGP-LP-ENHGFKTINSFAEI  526 (526)
Q Consensus       476 ~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~-~~-~~~~~~~i~~l~eL  526 (526)
                       |++|++|||+.+|+.+|+++|+.+|++.++.... .. ...++++++++.||
T Consensus       183 -~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el  234 (243)
T 3qxg_A          183 -ADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTL  234 (243)
T ss_dssp             -GGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHH
T ss_pred             -HHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHH
Confidence             9999999999999999999999999999874322 11 12358999998764

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.89  E-value=6.9e-23  Score=191.47  Aligned_cols=122  Identities=19%  Similarity=0.196  Sum_probs=106.0

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchH---HHHHHHHhhcCCCCcccccceEEe--CC----cCCCCCHHHHHHHHHH
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSR---LAQRLIFGNSNYGDLRKYLSGFFD--TA----VGNKRETPSYVEITNS  471 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~---~~~~~~l~~l~~~gl~~~fd~i~~--~~----~~~KP~p~~~~~~~~~  471 (526)
                      ++++||+.++|+.|+++|++++|+||++.   ..+...++.+   |+..+|+.++.  +.    ...||+|++|+.++++
T Consensus        33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~---gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~  109 (189)
T 3ib6_A           33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNF---GIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNA  109 (189)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHT---TCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHH
T ss_pred             ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhc---CchhheEEEEEccccccccCCCCcCHHHHHHHHHH
Confidence            36999999999999999999999999987   8888999999   99999999983  33    6789999999999999


Q ss_pred             cCCCCCCcEEEEecC-HhhHHHHHHcCCcEEEEeCCCCC---CCCCC-CCCeEec--CCCCC
Q 009774          472 LGVDKPSEILFVTDV-YQEATAAKAAGLEVVISIRPGNG---PLPEN-HGFKTIN--SFAEI  526 (526)
Q Consensus       472 l~~~~p~~~l~VgDs-~~Di~~A~~aG~~~i~v~~~~~~---~~~~~-~~~~~i~--~l~eL  526 (526)
                      +|++ |++|+||||+ ..|+.+|+++||.+|++.+++..   ..... .++.+++  ++.||
T Consensus       110 ~~~~-~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l  170 (189)
T 3ib6_A          110 LQID-KTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADV  170 (189)
T ss_dssp             HTCC-GGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGH
T ss_pred             cCCC-cccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhH
Confidence            9997 9999999999 69999999999999999988542   22222 4588888  88764

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.89  E-value=2.4e-22  Score=195.82  Aligned_cols=121  Identities=21%  Similarity=0.230  Sum_probs=106.7

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|+  |++++|+||++...++..++.+   |+..+|+.++  +.....||+|++|+.+++++|++ |
T Consensus        91 ~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~---gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~  164 (253)
T 1qq5_A           91 RLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANA---GLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVT-P  164 (253)
T ss_dssp             SCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCC-G
T ss_pred             cCCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHC---CchhhccEEEEccccCCCCCCHHHHHHHHHHcCCC-H
Confidence            3579999999999999  8999999999999999999999   9999999988  45678999999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeC-----------------------CCC-CCCCCCCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIR-----------------------PGN-GPLPENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~-----------------------~~~-~~~~~~~~~~~i~~l~eL  526 (526)
                      ++|+||||+.+|+.+|+++|+.++++++                       +.. .+.....++++++|+.||
T Consensus       165 ~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  237 (253)
T 1qq5_A          165 AEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDL  237 (253)
T ss_dssp             GGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGH
T ss_pred             HHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHH
Confidence            9999999999999999999999999998                       322 222233458999999874

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.89  E-value=3e-23  Score=200.13  Aligned_cols=122  Identities=14%  Similarity=0.109  Sum_probs=102.1

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc--ceEE--eCCcCCCCCHHHHHHHHHHcCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--SGFF--DTAVGNKRETPSYVEITNSLGVD  475 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f--d~i~--~~~~~~KP~p~~~~~~~~~l~~~  475 (526)
                      ...++||+.++|+.|+++|++++++||++.......++.    ++.++|  +.++  +.....||+|++|+.+++++|++
T Consensus       106 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~----~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~  181 (247)
T 3dv9_A          106 KAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH----NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFK  181 (247)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH----HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCC
T ss_pred             cCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh----hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCC
Confidence            457999999999999999999999999998877777765    577899  8788  45778999999999999999997


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCC-CC-CCCCCeEecCCCCC
Q 009774          476 KPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGP-LP-ENHGFKTINSFAEI  526 (526)
Q Consensus       476 ~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~-~~-~~~~~~~i~~l~eL  526 (526)
                       |++|++|||+.+|+.+|+++|+.+|++.++.... .. ...++++++++.||
T Consensus       182 -~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el  233 (247)
T 3dv9_A          182 -PNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDF  233 (247)
T ss_dssp             -GGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHH
T ss_pred             -hhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHH
Confidence             9999999999999999999999999999874322 21 22458999988764

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.89  E-value=4.8e-23  Score=198.56  Aligned_cols=123  Identities=15%  Similarity=0.183  Sum_probs=109.6

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCC-
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK-  476 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~-  476 (526)
                      ...++||+.++|+.|+++|++++++||++...++..++.+   |+.++|+.++  +.....||+|++|..+++++|+ + 
T Consensus       108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~-~~  183 (240)
T 3sd7_A          108 ENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYF---DIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNV-KD  183 (240)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT---TCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTC-CC
T ss_pred             ccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHc---CcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCC-CC
Confidence            4579999999999999999999999999999999999999   9999999988  5577899999999999999999 7 


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCC-CCC-CCCCCeEecCCCCC
Q 009774          477 PSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLP-ENHGFKTINSFAEI  526 (526)
Q Consensus       477 p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~-~~~-~~~~~~~i~~l~eL  526 (526)
                      |++|++|||+.+|+.+|+++|+.++++.++... ... ...++++++++.||
T Consensus       184 ~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el  235 (240)
T 3sd7_A          184 KDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESI  235 (240)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTH
T ss_pred             CCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHH
Confidence            999999999999999999999999999987432 222 23458999999875

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.88  E-value=1.1e-21  Score=185.89  Aligned_cols=122  Identities=20%  Similarity=0.202  Sum_probs=108.7

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      ..++|++.++|+.|++.|++++++||.+....+..++.+   ++..+|+.++  +.....||+|..|.++++++|++ |+
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~-~~  168 (226)
T 1te2_A           93 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMF---DLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVD-PL  168 (226)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSC-GG
T ss_pred             CCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhc---CcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCC-HH
Confidence            468999999999999999999999999999999999999   9999999988  44667899999999999999997 99


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCC-CCCCCCeEecCCCCC
Q 009774          479 EILFVTDVYQEATAAKAAGLEVVISIRPGNGPL-PENHGFKTINSFAEI  526 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~-~~~~~~~~i~~l~eL  526 (526)
                      +|++|||+.+|+.+|+.+|+.++++.++++... ....++++++++.||
T Consensus       169 ~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el  217 (226)
T 1te2_A          169 TCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL  217 (226)
T ss_dssp             GEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGC
T ss_pred             HeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHH
Confidence            999999999999999999999999999854332 234458999999876

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.88  E-value=1.3e-21  Score=190.09  Aligned_cols=119  Identities=11%  Similarity=0.089  Sum_probs=102.0

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      ...++||+.++|+.|+ +|++++++||++...++..++.+   ++.++|+.++.   ..||+|+.|..+++++|++ |++
T Consensus       110 ~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~---~l~~~f~~i~~---~~kp~~~~~~~~~~~l~~~-~~~  181 (251)
T 2pke_A          110 PVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQS---GLSDLFPRIEV---VSEKDPQTYARVLSEFDLP-AER  181 (251)
T ss_dssp             CCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHH---SGGGTCCCEEE---ESCCSHHHHHHHHHHHTCC-GGG
T ss_pred             cCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHc---CcHHhCceeee---eCCCCHHHHHHHHHHhCcC-chh
Confidence            4579999999999999 89999999999999999999999   99999998874   3699999999999999997 999


Q ss_pred             EEEEecCH-hhHHHHHHcCCcEEEEeCCCCCC----C-C-CCCCCe-EecCCCCC
Q 009774          480 ILFVTDVY-QEATAAKAAGLEVVISIRPGNGP----L-P-ENHGFK-TINSFAEI  526 (526)
Q Consensus       480 ~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~~----~-~-~~~~~~-~i~~l~eL  526 (526)
                      |++|||+. +|+.+|+++|+.++++.++....    . . ...+++ +|+++.||
T Consensus       182 ~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el  236 (251)
T 2pke_A          182 FVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGW  236 (251)
T ss_dssp             EEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGGH
T ss_pred             EEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHH
Confidence            99999999 99999999999999998763211    1 1 233477 89998874

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.88  E-value=9.4e-22  Score=194.76  Aligned_cols=123  Identities=11%  Similarity=0.156  Sum_probs=104.2

Q ss_pred             cCccCCCHHHHHHHHHHCCC--eEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCC----cCCCCCHHHHHHHHHH
Q 009774          400 EGEVFDDVPEALEKWHSLGT--KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTA----VGNKRETPSYVEITNS  471 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~--~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~----~~~KP~p~~~~~~~~~  471 (526)
                      ...++||+.++|+.|+++|+  +++|+||++....+..++.+   |+.++|+.++  +..    ...||+|++|+.++++
T Consensus       140 ~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~---gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~  216 (282)
T 3nuq_A          140 ILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLL---GIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKE  216 (282)
T ss_dssp             TCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHH---TCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHH
T ss_pred             ccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhC---CcccccceEEEeccCCCcccCCCcCHHHHHHHHHH
Confidence            45799999999999999999  99999999999999999999   9999999988  222    4579999999999999


Q ss_pred             cCCCCC-CcEEEEecCHhhHHHHHHcCC-cEEEEeCCCCCCC--CCCCCCeEecCCCCC
Q 009774          472 LGVDKP-SEILFVTDVYQEATAAKAAGL-EVVISIRPGNGPL--PENHGFKTINSFAEI  526 (526)
Q Consensus       472 l~~~~p-~~~l~VgDs~~Di~~A~~aG~-~~i~v~~~~~~~~--~~~~~~~~i~~l~eL  526 (526)
                      +|++ | ++|++|||+.+|+.+|+++|+ .++++.++.....  ....++++++|+.||
T Consensus       217 lgi~-~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el  274 (282)
T 3nuq_A          217 SGLA-RYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILEL  274 (282)
T ss_dssp             HTCC-CGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGG
T ss_pred             cCCC-CcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHH
Confidence            9997 9 999999999999999999999 5566655533221  123448999999875

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.88  E-value=9.3e-22  Score=184.56  Aligned_cols=118  Identities=21%  Similarity=0.317  Sum_probs=103.9

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      ..++||+.+ |+.|+++ ++++|+||++...++..++.+   |+.++|+.++  +.....||+|++|..+++++|   |+
T Consensus        73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~---~~  144 (201)
T 2w43_A           73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERN---GLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG---AK  144 (201)
T ss_dssp             CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT---CS
T ss_pred             cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHC---CcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC---CC
Confidence            579999999 9999999 999999999999999999999   9999999988  456778999999999999999   68


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEEEEeCCCCC-CCCCCCCCeEecCCCCC
Q 009774          479 EILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLPENHGFKTINSFAEI  526 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~-~~~~~~~~~~i~~l~eL  526 (526)
                      +|+||||+.+|+.+|+++|+.++++.++++. +.....++++++++.||
T Consensus       145 ~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  193 (201)
T 2w43_A          145 EAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKEL  193 (201)
T ss_dssp             CCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHH
T ss_pred             cEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHH
Confidence            9999999999999999999999999997443 22333458899988764

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.88  E-value=3.3e-22  Score=191.18  Aligned_cols=123  Identities=15%  Similarity=0.115  Sum_probs=105.0

Q ss_pred             cCccCCCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCC-cCCCCCHHHHHHHHHHcC--
Q 009774          400 EGEVFDDVPEALEKWHSL-GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTA-VGNKRETPSYVEITNSLG--  473 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~-G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~-~~~KP~p~~~~~~~~~l~--  473 (526)
                      ...++||+.++|+.|+++ |++++|+||++...++..++.+   ++.++|+.++  +.. ...||.|.+|..+++++|  
T Consensus        91 ~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~  167 (234)
T 2hcf_A           91 DITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLP---GIDHYFPFGAFADDALDRNELPHIALERARRMTGAN  167 (234)
T ss_dssp             GEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTT---TCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCC
T ss_pred             CCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHC---CchhhcCcceecCCCcCccchHHHHHHHHHHHhCCC
Confidence            347899999999999999 9999999999999999999999   9999999766  333 345789999999999999  


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCC-CC-CCCCCeEecCCCCC
Q 009774          474 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGP-LP-ENHGFKTINSFAEI  526 (526)
Q Consensus       474 ~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~-~~-~~~~~~~i~~l~eL  526 (526)
                      ++ |++|++|||+.+|+.+|+++|+.++++.++.... .. ...++++++++.||
T Consensus       168 ~~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el  221 (234)
T 2hcf_A          168 YS-PSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAET  221 (234)
T ss_dssp             CC-GGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCH
T ss_pred             CC-cccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhH
Confidence            87 9999999999999999999999999999874322 12 12258899998875

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.87  E-value=3.9e-22  Score=187.75  Aligned_cols=99  Identities=9%  Similarity=-0.014  Sum_probs=86.3

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      +++||+.++|+.|+++|++++|+||++.....   +.+   +  .+|+.++  ++....||+|++|+++++++++.++++
T Consensus        36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~---~~~---~--~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~  107 (196)
T 2oda_A           36 QLTPGAQNALKALRDQGMPCAWIDELPEALST---PLA---A--PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEG  107 (196)
T ss_dssp             SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHH---HHH---T--TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTT
T ss_pred             CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHH---Hhc---C--ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCcc
Confidence            58999999999999999999999999988663   333   3  4678877  456788999999999999999962389


Q ss_pred             EEEEecCHhhHHHHHHcCCcEEEEeCCCC
Q 009774          480 ILFVTDVYQEATAAKAAGLEVVISIRPGN  508 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~aG~~~i~v~~~~~  508 (526)
                      |+||||+.+|+.+|+++||.+|++.++..
T Consensus       108 ~v~VGDs~~Di~aA~~aG~~~i~v~~g~~  136 (196)
T 2oda_A          108 CVLISGDPRLLQSGLNAGLWTIGLASCGP  136 (196)
T ss_dssp             CEEEESCHHHHHHHHHHTCEEEEESSSST
T ss_pred             EEEEeCCHHHHHHHHHCCCEEEEEccCCc
Confidence            99999999999999999999999999843

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.87  E-value=8.4e-23  Score=194.93  Aligned_cols=114  Identities=22%  Similarity=0.253  Sum_probs=91.8

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|+++|++++|+||++.. .+..++.+   |+.++|+.++  +.....||+|++|..+++++|++ |
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l~~~---gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~  167 (220)
T 2zg6_A           93 EAFLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKF---DLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYP-A  167 (220)
T ss_dssp             EEEECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHHHHH---TCGGGCSEEC-----------CCHHHHHHHHHCSS-E
T ss_pred             CceECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHhc---CcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCC-e
Confidence            4579999999999999999999999999874 78889999   9999999998  45677899999999999999997 7


Q ss_pred             CcEEEEecCHh-hHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCC
Q 009774          478 SEILFVTDVYQ-EATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE  525 (526)
Q Consensus       478 ~~~l~VgDs~~-Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e  525 (526)
                         +||||+.. |+.+|+++|+.++++.+++.....    +.+++++.|
T Consensus       168 ---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~~~~----~~~i~~l~e  209 (220)
T 2zg6_A          168 ---VHVGDIYELDYIGAKRSYVDPILLDRYDFYPDV----RDRVKNLRE  209 (220)
T ss_dssp             ---EEEESSCCCCCCCSSSCSEEEEEBCTTSCCTTC----CSCBSSHHH
T ss_pred             ---EEEcCCchHhHHHHHHCCCeEEEECCCCCCCCc----ceEECCHHH
Confidence               99999998 999999999999999876432221    456777655

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.87  E-value=2.4e-22  Score=185.60  Aligned_cols=119  Identities=15%  Similarity=0.140  Sum_probs=99.5

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchH---------------HHHHHHHhhcCCCCcccccceEE-------eCCcCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRKYLSGFF-------DTAVGNK  459 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~---------------~~~~~~l~~l~~~gl~~~fd~i~-------~~~~~~K  459 (526)
                      +++||+.++|++|+++|++++|+||++.               ..++..++.+   |  .+|+.++       +.....|
T Consensus        27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~---g--~~~~~~~~~~~~~~~~~~~~K  101 (179)
T 3l8h_A           27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQM---G--GVVDAIFMCPHGPDDGCACRK  101 (179)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHT---T--CCCCEEEEECCCTTSCCSSST
T ss_pred             eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhC---C--CceeEEEEcCCCCCCCCCCCC
Confidence            5899999999999999999999999986               5667778887   6  4566655       2356789


Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCC-C---CCCCCeEecCCCCC
Q 009774          460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPL-P---ENHGFKTINSFAEI  526 (526)
Q Consensus       460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~-~---~~~~~~~i~~l~eL  526 (526)
                      |+|++|+++++++|++ |++|+||||+.+|+.+|+++||.+|++.++..... .   ...++++++++.||
T Consensus       102 P~~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el  171 (179)
T 3l8h_A          102 PLPGMYRDIARRYDVD-LAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAV  171 (179)
T ss_dssp             TSSHHHHHHHHHHTCC-CTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHH
T ss_pred             CCHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHH
Confidence            9999999999999997 99999999999999999999999999999843211 1   23458999998764

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.87  E-value=2.1e-21  Score=186.05  Aligned_cols=101  Identities=17%  Similarity=0.249  Sum_probs=92.6

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHH------hhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIF------GNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLG  473 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l------~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~  473 (526)
                      .++||+.++|+.|+++ ++++|+||++....+.++      +.+   ++.++|+.++  +.....||+|++|+.+++++|
T Consensus       112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~---~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g  187 (229)
T 4dcc_A          112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTF---KVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAG  187 (229)
T ss_dssp             CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTB---CHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHT
T ss_pred             hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccC---CHHHhCCEEEeecccCCCCCCHHHHHHHHHHcC
Confidence            4789999999999998 999999999999888665      556   9999999998  457789999999999999999


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCC
Q 009774          474 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG  507 (526)
Q Consensus       474 ~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~  507 (526)
                      ++ |++|+||||+.+|+.+|+++|+.+++++++.
T Consensus       188 ~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~  220 (229)
T 4dcc_A          188 ID-PKETFFIDDSEINCKVAQELGISTYTPKAGE  220 (229)
T ss_dssp             CC-GGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred             CC-HHHeEEECCCHHHHHHHHHcCCEEEEECCHH
Confidence            97 9999999999999999999999999998863

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.86  E-value=2.1e-21  Score=181.72  Aligned_cols=101  Identities=20%  Similarity=0.207  Sum_probs=94.8

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      ..++||+.++|+.|+++| +++|+||++...+...++.+   |+.++|+.++  +.....||+|++|..+++++|++ |+
T Consensus        85 ~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~---~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~~  159 (200)
T 3cnh_A           85 SQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTF---GLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVR-PE  159 (200)
T ss_dssp             CCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHH---TGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCC-GG
T ss_pred             CccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhC---CHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCC-HH
Confidence            358999999999999999 99999999999999999999   9999999988  44677899999999999999997 99


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          479 EILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      +|+||||+.+|+.+|+++|+.++++.++
T Consensus       160 ~~~~vgD~~~Di~~a~~aG~~~~~~~~~  187 (200)
T 3cnh_A          160 EAVMVDDRLQNVQAARAVGMHAVQCVDA  187 (200)
T ss_dssp             GEEEEESCHHHHHHHHHTTCEEEECSCH
T ss_pred             HeEEeCCCHHHHHHHHHCCCEEEEECCc
Confidence            9999999999999999999999999875

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.86  E-value=6.3e-21  Score=180.47  Aligned_cols=123  Identities=16%  Similarity=0.184  Sum_probs=107.5

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++|++.++|+.|+++|++++++||.+....+..++.+   ++..+|+.++  +.....||+|..|..+++++|++ |
T Consensus        87 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~-~  162 (225)
T 3d6j_A           87 NTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNH---MPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKAC-P  162 (225)
T ss_dssp             GCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTS---SCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCC-G
T ss_pred             cCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHc---CchhheeeeeehhhcCCCCCChHHHHHHHHHhCCC-h
Confidence            3468999999999999999999999999999999999999   8999999888  44667899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCC-CCCCCC-CCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLPENH-GFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~-~~~~~~-~~~~i~~l~eL  526 (526)
                      ++|++|||+.+|+.+|+.+|+.++++.++.+. ...... ++++++++.||
T Consensus       163 ~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el  213 (225)
T 3d6j_A          163 EEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQL  213 (225)
T ss_dssp             GGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGG
T ss_pred             HHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHH
Confidence            99999999999999999999999999987433 233222 58899988775

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.86  E-value=2.1e-21  Score=190.06  Aligned_cols=105  Identities=17%  Similarity=0.175  Sum_probs=95.7

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc-ceEE--eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFF--DTAVGNKRETPSYVEITNSLGVDK  476 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f-d~i~--~~~~~~KP~p~~~~~~~~~l~~~~  476 (526)
                      ...++||+.++|+.|+++|++++++||++....+..++.+   ++..+| +.++  +.....||+|+.|..+++++|++ 
T Consensus       101 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~-  176 (267)
T 1swv_A          101 YASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEA---ALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVY-  176 (267)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHH---HHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCC-
T ss_pred             ccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHc---CCcccChHheecCCccCCCCCCHHHHHHHHHHhCCC-
Confidence            4578999999999999999999999999999989899998   888886 7777  45677899999999999999997 


Q ss_pred             C-CcEEEEecCHhhHHHHHHcCCcEEEEeCCCC
Q 009774          477 P-SEILFVTDVYQEATAAKAAGLEVVISIRPGN  508 (526)
Q Consensus       477 p-~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~  508 (526)
                      | ++|++|||+.+|+.+|+.+|+.++++.++..
T Consensus       177 ~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~  209 (267)
T 1swv_A          177 PMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSS  209 (267)
T ss_dssp             SGGGEEEEESSHHHHHHHHHTTSEEEEECTTCT
T ss_pred             CCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCC
Confidence            8 9999999999999999999999999998844

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.86  E-value=6.1e-21  Score=177.71  Aligned_cols=116  Identities=14%  Similarity=0.243  Sum_probs=104.5

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++|++.++|+.|+++|++++++||++..... .++.+   ++.++|+.++  +.....||+|+.|..+++++|++ |
T Consensus        83 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~---~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~-~  157 (207)
T 2go7_A           83 QVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDL---GVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLN-S  157 (207)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHH---TCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCC-G
T ss_pred             cceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHc---CchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCC-c
Confidence            4578999999999999999999999999998888 99999   8999999888  44667899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      ++|++|||+.+|+.+|+++|+.++++.++. .     .++++++++.||
T Consensus       158 ~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~-----~a~~v~~~~~el  200 (207)
T 2go7_A          158 DNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y-----EGNHRIQALADI  200 (207)
T ss_dssp             GGEEEEESSHHHHHHHHHHTCEEEESSCCS-C-----TTEEECSSTTHH
T ss_pred             ccEEEECCCHHHHHHHHHCCCeEEEEecCC-C-----CCCEEeCCHHHH
Confidence            999999999999999999999999998765 2     357888888764

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.85  E-value=1.1e-21  Score=185.12  Aligned_cols=100  Identities=14%  Similarity=0.258  Sum_probs=93.6

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhh------cCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN------SNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLG  473 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~------l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~  473 (526)
                      .++|++.++|+.|++ |++++++||++.......++.      +   ++..+|+.++  +.....||+|++|..+++++|
T Consensus        89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~---~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~  164 (211)
T 2i6x_A           89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGR---TLDSFFDKVYASCQMGKYKPNEDIFLEMIADSG  164 (211)
T ss_dssp             EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCC---CGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHC
T ss_pred             ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhcccccc---CHHHHcCeEEeecccCCCCCCHHHHHHHHHHhC
Confidence            689999999999999 999999999999998888888      7   8999999988  446789999999999999999


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          474 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       474 ~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      ++ |++|++|||+.+|+.+|+++|+.+++++++
T Consensus       165 ~~-~~~~~~igD~~~Di~~a~~aG~~~~~~~~~  196 (211)
T 2i6x_A          165 MK-PEETLFIDDGPANVATAERLGFHTYCPDNG  196 (211)
T ss_dssp             CC-GGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred             CC-hHHeEEeCCCHHHHHHHHHcCCEEEEECCH
Confidence            97 999999999999999999999999999876

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.85  E-value=2.7e-21  Score=182.94  Aligned_cols=116  Identities=16%  Similarity=0.224  Sum_probs=100.6

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      ..++|++.++|+.|+++|++++++||.  ...+..++.+   ++.++|+.++  +.....||+|+.|+.+++++|++ |+
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~---~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~-~~  163 (221)
T 2wf7_A           90 ADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERM---NLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVA-PS  163 (221)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHT---TCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCC-GG
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHc---ChHHHcceEeccccCCCCCCChHHHHHHHHHcCCC-hh
Confidence            468999999999999999999999998  4556788888   8999999988  45778899999999999999997 99


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          479 EILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      +|++|||+.+|+.+|+++|+.+++++...   ... .++++++++.|+
T Consensus       164 ~~i~iGD~~nDi~~a~~aG~~~~~~~~~~---~~~-~a~~v~~~~~el  207 (221)
T 2wf7_A          164 ESIGLEDSQAGIQAIKDSGALPIGVGRPE---DLG-DDIVIVPDTSHY  207 (221)
T ss_dssp             GEEEEESSHHHHHHHHHHTCEEEEESCHH---HHC-SSSEEESSGGGC
T ss_pred             HeEEEeCCHHHHHHHHHCCCEEEEECCHH---Hhc-cccchhcCHHhC
Confidence            99999999999999999999999996431   122 457888888775

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.85  E-value=1.1e-21  Score=184.22  Aligned_cols=102  Identities=18%  Similarity=0.272  Sum_probs=92.7

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhh-cCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN-SNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~-l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ..++||+.++|+.|+++|++++++||++....+..++. +   |+..+|+.++  +.....||+|++|..+++++|++ |
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~---~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~  165 (206)
T 2b0c_A           90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYP---EIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFS-P  165 (206)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCH---HHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCC-G
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhcc---ChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCC-H
Confidence            36899999999999999999999999988776666666 6   8889999988  34677899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      ++|+||||+.+|+.+|+++|+.+++++++
T Consensus       166 ~~~~~vgD~~~Di~~a~~aG~~~~~~~~~  194 (206)
T 2b0c_A          166 SDTVFFDDNADNIEGANQLGITSILVKDK  194 (206)
T ss_dssp             GGEEEEESCHHHHHHHHTTTCEEEECCST
T ss_pred             HHeEEeCCCHHHHHHHHHcCCeEEEecCC
Confidence            99999999999999999999999999875

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.84  E-value=5.3e-21  Score=189.09  Aligned_cols=122  Identities=18%  Similarity=0.162  Sum_probs=105.7

Q ss_pred             cCccCCCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCC--
Q 009774          400 EGEVFDDVPEALEKWHSL-GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGV--  474 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~-G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~--  474 (526)
                      ...++||+.++|+.|+++ |++++++||++....+..++.+   ++. +|+.++  +.....||+|+.|+.+++++|+  
T Consensus       112 ~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~---~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~  187 (275)
T 2qlt_A          112 HSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDIL---KIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFPI  187 (275)
T ss_dssp             TCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHH---TCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCC
T ss_pred             CCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHc---CCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCCc
Confidence            357899999999999999 9999999999999999999998   776 488777  4567789999999999999999  


Q ss_pred             -----CCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCC-CCCCCeEecCCCCC
Q 009774          475 -----DKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLP-ENHGFKTINSFAEI  526 (526)
Q Consensus       475 -----~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~-~~~~~~~i~~l~eL  526 (526)
                           + |++|++|||+.+|+.+|+++|+.++++.++.+.... ...++++++++.||
T Consensus       188 ~~~~~~-~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el  244 (275)
T 2qlt_A          188 NEQDPS-KSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESI  244 (275)
T ss_dssp             CSSCGG-GSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGE
T ss_pred             cccCCC-cceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHc
Confidence                 9 999999999999999999999999999987543322 22358888888764

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.84  E-value=3.2e-20  Score=171.82  Aligned_cols=98  Identities=17%  Similarity=0.267  Sum_probs=89.6

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      .++|++.++|+.|+++|++++++||.+. ..+..++.+   ++.++|+.++  +.....||+|+.|+.+++++|+ +  +
T Consensus        82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~---~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~-~--~  154 (190)
T 2fi1_A           82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKT---SIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI-S--S  154 (190)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHT---TCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC-S--S
T ss_pred             ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHc---CCHhheeeeeeccccCCCCCCHHHHHHHHHHcCC-C--e
Confidence            4899999999999999999999999875 567788998   9999999988  4567789999999999999999 3  9


Q ss_pred             EEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          480 ILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      |++|||+.+|+.+|+++|+.+++++++
T Consensus       155 ~~~iGD~~~Di~~a~~aG~~~~~~~~~  181 (190)
T 2fi1_A          155 GLVIGDRPIDIEAGQAAGLDTHLFTSI  181 (190)
T ss_dssp             EEEEESSHHHHHHHHHTTCEEEECSCH
T ss_pred             EEEEcCCHHHHHHHHHcCCeEEEECCC
Confidence            999999999999999999999999875

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.84  E-value=7.6e-21  Score=180.88  Aligned_cols=119  Identities=20%  Similarity=0.231  Sum_probs=100.6

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCch---------------HHHHHHHHhhcCCCCcccccceEE-e------------
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGS---------------RLAQRLIFGNSNYGDLRKYLSGFF-D------------  453 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~---------------~~~~~~~l~~l~~~gl~~~fd~i~-~------------  453 (526)
                      +++||+.++|++|+++|++++|+||++               ...++..++.+   |+.  |+.++ .            
T Consensus        50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~---gl~--f~~~~~~~~~~~~~~~~~~  124 (211)
T 2gmw_A           50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADR---DVD--LDGIYYCPHHPQGSVEEFR  124 (211)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHT---TCC--CSEEEEECCBTTCSSGGGB
T ss_pred             cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHc---CCc--eEEEEECCcCCCCcccccC
Confidence            589999999999999999999999999               47788889998   876  77765 2            


Q ss_pred             -CCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcE-EEEeCCCCCCC-CCCCCCeEecCCCCC
Q 009774          454 -TAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV-VISIRPGNGPL-PENHGFKTINSFAEI  526 (526)
Q Consensus       454 -~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~-i~v~~~~~~~~-~~~~~~~~i~~l~eL  526 (526)
                       .....||+|++|+.++++++++ |++|+||||+.+|+.+|+++|+.+ |++.++..... ....++++++++.||
T Consensus       125 ~~~~~~KP~p~~~~~~~~~lgi~-~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el  199 (211)
T 2gmw_A          125 QVCDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADL  199 (211)
T ss_dssp             SCCSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGH
T ss_pred             ccCcCCCCCHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHH
Confidence             2456899999999999999997 999999999999999999999999 99988743221 112358899998874

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.84  E-value=9.7e-21  Score=203.10  Aligned_cols=101  Identities=16%  Similarity=0.188  Sum_probs=89.2

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCc------hHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHH
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSG------SRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNS  471 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~------~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~  471 (526)
                      ...++||+.++|+.|+++|++++|+||+      ........+.     ++.++||.++  ++....||+|++|++++++
T Consensus        98 ~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~-----~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~  172 (555)
T 3i28_A           98 ARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC-----ELKMHFDFLIESCQVGMVKPEPQIYKFLLDT  172 (555)
T ss_dssp             HCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH-----HHHTTSSEEEEHHHHTCCTTCHHHHHHHHHH
T ss_pred             hcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh-----hhhhheeEEEeccccCCCCCCHHHHHHHHHH
Confidence            3579999999999999999999999998      4444444433     6778999998  5578899999999999999


Q ss_pred             cCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          472 LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       472 l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      +|++ |++|+||||+.+|+.+|+++||.++++.++
T Consensus       173 lg~~-p~~~~~v~D~~~di~~a~~aG~~~~~~~~~  206 (555)
T 3i28_A          173 LKAS-PSEVVFLDDIGANLKPARDLGMVTILVQDT  206 (555)
T ss_dssp             HTCC-GGGEEEEESCHHHHHHHHHHTCEEEECSSH
T ss_pred             cCCC-hhHEEEECCcHHHHHHHHHcCCEEEEECCC
Confidence            9997 999999999999999999999999999864

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.83  E-value=1.3e-20  Score=179.42  Aligned_cols=119  Identities=18%  Similarity=0.309  Sum_probs=101.8

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc-ceEE--eCCcCC--CCCHHHHHHHHHHcCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFF--DTAVGN--KRETPSYVEITNSLGVD  475 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f-d~i~--~~~~~~--KP~p~~~~~~~~~l~~~  475 (526)
                      ..++|++.++|+.|+.   +++++||++...++..++.+   ++..+| +.++  +.....  ||+|..|+++++++|++
T Consensus        86 ~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~---~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~  159 (229)
T 2fdr_A           86 VKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKV---GLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVS  159 (229)
T ss_dssp             CCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHT---TCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCC
T ss_pred             CccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhC---ChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCC
Confidence            4689999999999884   89999999999999999999   999999 8877  345677  99999999999999997


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCC-C----CCCCC-CCeEecCCCCC
Q 009774          476 KPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-P----LPENH-GFKTINSFAEI  526 (526)
Q Consensus       476 ~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~-~----~~~~~-~~~~i~~l~eL  526 (526)
                       |++|++|||+.+|+.+|+++|+.++++.++... +    ..... ++++++++.||
T Consensus       160 -~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el  215 (229)
T 2fdr_A          160 -PDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDL  215 (229)
T ss_dssp             -GGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGH
T ss_pred             -hhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHH
Confidence             999999999999999999999999999987432 0    11112 58899988774

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.83  E-value=2.8e-21  Score=185.83  Aligned_cols=118  Identities=15%  Similarity=0.106  Sum_probs=96.1

Q ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          399 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       399 ~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      ....++||+.++|+.|+++| +++|+||++...++..++.+   |+.++|+.++.. .  +++|..+..+++  +++ |+
T Consensus        93 ~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~---gl~~~f~~~~~~-~--~~K~~~~~~~~~--~~~-~~  162 (231)
T 2p11_A           93 FASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARS---GLWDEVEGRVLI-Y--IHKELMLDQVME--CYP-AR  162 (231)
T ss_dssp             GGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHT---THHHHTTTCEEE-E--SSGGGCHHHHHH--HSC-CS
T ss_pred             HhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHc---CcHHhcCeeEEe-c--CChHHHHHHHHh--cCC-Cc
Confidence            34679999999999999999 99999999999999999999   999999876531 2  334667777766  897 99


Q ss_pred             cEEEEecCHh---hHHHHHHcCCcEEEEeCCCC-CC--CC-CC-CCCeEecCCCCC
Q 009774          479 EILFVTDVYQ---EATAAKAAGLEVVISIRPGN-GP--LP-EN-HGFKTINSFAEI  526 (526)
Q Consensus       479 ~~l~VgDs~~---Di~~A~~aG~~~i~v~~~~~-~~--~~-~~-~~~~~i~~l~eL  526 (526)
                      +|+||||+.+   |+.+|+++||.+|++.++.. ..  .. .. .++++++++.||
T Consensus       163 ~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el  218 (231)
T 2p11_A          163 HYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDL  218 (231)
T ss_dssp             EEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGG
T ss_pred             eEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHH
Confidence            9999999998   99999999999999998732 11  11 11 258899998875

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.83  E-value=1.4e-20  Score=177.99  Aligned_cols=114  Identities=17%  Similarity=0.160  Sum_probs=97.2

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE------------eCCcCCCCCHHHHHHH
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------------DTAVGNKRETPSYVEI  468 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~------------~~~~~~KP~p~~~~~~  468 (526)
                      ..++||+.++|+.|+++|++++++||++...++..++.+   |+..+|+.++            +.....||+|+.|+.+
T Consensus        74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~---gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~  150 (217)
T 3m1y_A           74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLL---HLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVL  150 (217)
T ss_dssp             CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHH---TCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHH
T ss_pred             CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHc---CcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHH
Confidence            579999999999999999999999999999999999999   9999999875            1234579999999999


Q ss_pred             HHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecC
Q 009774          469 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS  522 (526)
Q Consensus       469 ~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~  522 (526)
                      ++++|++ |++|++|||+.+|+.+|+++|+.+++ +.   .+.....+++++++
T Consensus       151 ~~~~g~~-~~~~i~vGDs~~Di~~a~~aG~~~~~-~~---~~~l~~~ad~v~~~  199 (217)
T 3m1y_A          151 QRLLNIS-KTNTLVVGDGANDLSMFKHAHIKIAF-NA---KEVLKQHATHCINE  199 (217)
T ss_dssp             HHHHTCC-STTEEEEECSGGGHHHHTTCSEEEEE-SC---CHHHHTTCSEEECS
T ss_pred             HHHcCCC-HhHEEEEeCCHHHHHHHHHCCCeEEE-Cc---cHHHHHhcceeecc
Confidence            9999997 99999999999999999999998877 22   12222334666654

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.81  E-value=1.3e-20  Score=165.17  Aligned_cols=100  Identities=13%  Similarity=0.050  Sum_probs=92.0

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCCcE
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSEI  480 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~~~  480 (526)
                      ++||+.++|++|+++|++++|+||++....+..++.+   ++..+|+.++  +.....||+|++|..++++++++ |++|
T Consensus        19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~-~~~~   94 (137)
T 2pr7_A           19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIREL---ETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLP-MRDC   94 (137)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHH---HHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCC-GGGE
T ss_pred             cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHC---ChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCC-cccE
Confidence            4477889999999999999999999998888889999   8999999998  34677899999999999999997 9999


Q ss_pred             EEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          481 LFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       481 l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      +||||+..|+.+|+++|+.++++.++
T Consensus        95 ~~vgD~~~di~~a~~~G~~~i~~~~~  120 (137)
T 2pr7_A           95 VLVDDSILNVRGAVEAGLVGVYYQQF  120 (137)
T ss_dssp             EEEESCHHHHHHHHHHTCEEEECSCH
T ss_pred             EEEcCCHHHHHHHHHCCCEEEEeCCh
Confidence            99999999999999999999999875

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.81  E-value=4e-20  Score=176.48  Aligned_cols=119  Identities=10%  Similarity=0.091  Sum_probs=95.3

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcc--cccceEE----------eCCc----CCCCCHHH
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR--KYLSGFF----------DTAV----GNKRETPS  464 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~--~~fd~i~----------~~~~----~~KP~p~~  464 (526)
                      .+++||+.++|+.|+++|++++|+||++...++.+++++   |+.  .+|+.++          ....    ..||+|++
T Consensus        85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~---gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~  161 (225)
T 1nnl_A           85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKL---NIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKV  161 (225)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT---TCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHc---CCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHH
Confidence            579999999999999999999999999999999999999   887  4777653          1111    13688899


Q ss_pred             HHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          465 YVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       465 ~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      |+++++++|++   +|+||||+.+|+.+|+++|+ +|++............++++++++.||
T Consensus       162 ~~~~~~~~~~~---~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el  219 (225)
T 1nnl_A          162 IKLLKEKFHFK---KIIMIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVEL  219 (225)
T ss_dssp             HHHHHHHHCCS---CEEEEESSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred             HHHHHHHcCCC---cEEEEeCcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHH
Confidence            99999999985   89999999999999999999 887754322111122348899998875

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=99.80  E-value=2e-19  Score=185.44  Aligned_cols=123  Identities=18%  Similarity=0.182  Sum_probs=106.0

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccc--eEE--eCCc-----------CCCCCHHH
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS--GFF--DTAV-----------GNKRETPS  464 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd--~i~--~~~~-----------~~KP~p~~  464 (526)
                      ..+++||+.++|+.|+++|++++|+||++...++.+++++   |+.++|+  .++  ++..           ..||+|++
T Consensus       213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~l---gL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~  289 (384)
T 1qyi_A          213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENL---GLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFS  289 (384)
T ss_dssp             BSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH---TCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHH
T ss_pred             CCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHc---CChHhcCCCEEEecccccccccccccccCCCCCCHHH
Confidence            3578999999999999999999999999999999999999   9999999  677  3332           38999999


Q ss_pred             HHHHHHHcC--------------CCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCC----CCC-CCCCCeEecCCCC
Q 009774          465 YVEITNSLG--------------VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG----PLP-ENHGFKTINSFAE  525 (526)
Q Consensus       465 ~~~~~~~l~--------------~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~----~~~-~~~~~~~i~~l~e  525 (526)
                      |+.++++++              ++ |++|+||||+..|+.+|+++||.+|++.++...    ... ...++++++++.|
T Consensus       290 ~~~a~~~lg~~~~~~~~~~~~~~v~-p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~e  368 (384)
T 1qyi_A          290 YIAALYGNNRDKYESYINKQDNIVN-KDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGE  368 (384)
T ss_dssp             HHHHHHCCCGGGHHHHHHCCTTCSC-TTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGG
T ss_pred             HHHHHHHcCCccccccccccccCCC-CcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECCHHH
Confidence            999999999              87 999999999999999999999999999987421    111 1234899999887


Q ss_pred             C
Q 009774          526 I  526 (526)
Q Consensus       526 L  526 (526)
                      |
T Consensus       369 L  369 (384)
T 1qyi_A          369 L  369 (384)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.79  E-value=1.7e-19  Score=166.64  Aligned_cols=100  Identities=13%  Similarity=0.085  Sum_probs=87.5

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCc---------------hHHHHHHHHhhcCCCCcccccceEE-e------CCcCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSG---------------SRLAQRLIFGNSNYGDLRKYLSGFF-D------TAVGNK  459 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~---------------~~~~~~~~l~~l~~~gl~~~fd~i~-~------~~~~~K  459 (526)
                      +++||+.++|+.|+++|++++|+||+               +...++.+++.+   |+.  |+.++ +      .....|
T Consensus        42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~---gl~--fd~v~~s~~~~~~~~~~~K  116 (176)
T 2fpr_A           42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQ---GVQ--FDEVLICPHLPADECDCRK  116 (176)
T ss_dssp             CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHT---TCC--EEEEEEECCCGGGCCSSST
T ss_pred             cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHc---CCC--eeEEEEcCCCCcccccccC
Confidence            58999999999999999999999999               677888899999   886  88875 3      356789


Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCC
Q 009774          460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG  507 (526)
Q Consensus       460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~  507 (526)
                      |+|++|+.++++++++ |++|+||||+..|+.+|+++||.+|++.++.
T Consensus       117 P~p~~~~~~~~~~gi~-~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~  163 (176)
T 2fpr_A          117 PKVKLVERYLAEQAMD-RANSYVIGDRATDIQLAENMGINGLRYDRET  163 (176)
T ss_dssp             TSCGGGGGGC----CC-GGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred             CCHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHcCCeEEEEcCCc
Confidence            9999999999999997 9999999999999999999999999998863

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.78  E-value=1.1e-18  Score=176.23  Aligned_cols=99  Identities=14%  Similarity=0.154  Sum_probs=89.9

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEe--C----------CcCCCCCHHHHHH
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD--T----------AVGNKRETPSYVE  467 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~--~----------~~~~KP~p~~~~~  467 (526)
                      .++++||+.++|+.|+++|++++|+||++...++.+++.+   |+..+|+.++.  +          ....||+|++|+.
T Consensus       177 ~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~l---gl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~  253 (317)
T 4eze_A          177 RMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARY---QLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVD  253 (317)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHH---TCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHH
T ss_pred             CCEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHc---CCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHH
Confidence            3479999999999999999999999999999999999999   99999987751  1          2355999999999


Q ss_pred             HHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774          468 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI  502 (526)
Q Consensus       468 ~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~  502 (526)
                      +++++|++ |++|+||||+.+|+.+|+++|+.+++
T Consensus       254 ~~~~lgv~-~~~~i~VGDs~~Di~aa~~AG~~va~  287 (317)
T 4eze_A          254 LAARLNIA-TENIIACGDGANDLPMLEHAGTGIAW  287 (317)
T ss_dssp             HHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             HHHHcCCC-cceEEEEeCCHHHHHHHHHCCCeEEe
Confidence            99999997 99999999999999999999997776

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.78  E-value=1e-19  Score=178.39  Aligned_cols=121  Identities=13%  Similarity=0.143  Sum_probs=96.4

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHH--HHH-HHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLA--QRL-IFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGV  474 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~--~~~-~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~  474 (526)
                      ...+||++.++|+.|+ +|+++ |+||++...  ... ..+..   ++..+|+.++  +.....||+|++|+.+++++|+
T Consensus       124 ~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~---~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~  198 (264)
T 1yv9_A          124 TELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAG---SVVTFVETATQTKPVYIGKPKAIIMERAIAHLGV  198 (264)
T ss_dssp             TTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHH---HHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCS
T ss_pred             CCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCc---HHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCC
Confidence            3468999999999997 89998 999987742  111 12222   5777888877  3456789999999999999999


Q ss_pred             CCCCcEEEEecCH-hhHHHHHHcCCcEEEEeCCCC-CCCCCC---CCCeEecCCCCC
Q 009774          475 DKPSEILFVTDVY-QEATAAKAAGLEVVISIRPGN-GPLPEN---HGFKTINSFAEI  526 (526)
Q Consensus       475 ~~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~-~~~~~~---~~~~~i~~l~eL  526 (526)
                      + |++|+||||++ +|+.+|+++|+.+|+|.++.. ......   .++++++++.||
T Consensus       199 ~-~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el  254 (264)
T 1yv9_A          199 E-KEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW  254 (264)
T ss_dssp             C-GGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred             C-HHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHH
Confidence            7 99999999995 999999999999999999833 323322   459999999875

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.78  E-value=3.9e-18  Score=163.32  Aligned_cols=97  Identities=10%  Similarity=0.066  Sum_probs=84.6

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE---e---------CCcCCCCCHHHHHHHH
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF---D---------TAVGNKRETPSYVEIT  469 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~---~---------~~~~~KP~p~~~~~~~  469 (526)
                      .++||+.++|+.|+++|++++|+||++...++.+++.+   |+..+|...+   +         .....+++++.++.++
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~  168 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAF---GVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWL  168 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT---TCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHH
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc---CCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHH
Confidence            57999999999999999999999999999999999999   8876665443   1         1223467788999999


Q ss_pred             HHcC---CCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774          470 NSLG---VDKPSEILFVTDVYQEATAAKAAGLEVVI  502 (526)
Q Consensus       470 ~~l~---~~~p~~~l~VgDs~~Di~~A~~aG~~~i~  502 (526)
                      +++|   ++ |++|++||||.+|+.+++.+|+.++.
T Consensus       169 ~~~~~~~~~-~~~~~~vGDs~~D~~~~~~ag~~~~~  203 (232)
T 3fvv_A          169 AGMGLALGD-FAESYFYSDSVNDVPLLEAVTRPIAA  203 (232)
T ss_dssp             HHTTCCGGG-SSEEEEEECCGGGHHHHHHSSEEEEE
T ss_pred             HHcCCCcCc-hhheEEEeCCHhhHHHHHhCCCeEEE
Confidence            9999   97 99999999999999999999988765

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.78  E-value=1.6e-19  Score=172.35  Aligned_cols=118  Identities=14%  Similarity=0.070  Sum_probs=97.3

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchH---------------HHHHHHHhhcCCCCcccccceEE-e------------
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRKYLSGFF-D------------  453 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~---------------~~~~~~l~~l~~~gl~~~fd~i~-~------------  453 (526)
                      +++||+.++|++|+++|++++|+||++.               ..++..++.+   |+.  |+.++ .            
T Consensus        56 ~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~---gl~--~~~~~~~~~~~~g~~~~~~  130 (218)
T 2o2x_A           56 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREE---GVF--VDMVLACAYHEAGVGPLAI  130 (218)
T ss_dssp             CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHT---TCC--CSEEEEECCCTTCCSTTCC
T ss_pred             eECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHc---CCc--eeeEEEeecCCCCceeecc
Confidence            5889999999999999999999999998               6788889988   764  66554 2            


Q ss_pred             -CCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcE-EEEeCCCCCC-CCCCCCCeEecCCCC
Q 009774          454 -TAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV-VISIRPGNGP-LPENHGFKTINSFAE  525 (526)
Q Consensus       454 -~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~-i~v~~~~~~~-~~~~~~~~~i~~l~e  525 (526)
                       .....||+|.+|+.++++++++ |++|+||||+.+|+.+|+++|+.+ +++.++.... .....++++++++.|
T Consensus       131 ~~~~~~KP~~~~~~~~~~~~~i~-~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~e  204 (218)
T 2o2x_A          131 PDHPMRKPNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGD  204 (218)
T ss_dssp             SSCTTSTTSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHH
T ss_pred             cCCccCCCCHHHHHHHHHHcCCC-HHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHH
Confidence             2456899999999999999997 999999999999999999999999 9999873322 212233666666654

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.78  E-value=5.2e-19  Score=164.69  Aligned_cols=101  Identities=17%  Similarity=0.195  Sum_probs=92.1

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCch-HHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGS-RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~-~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      ...++||+.++|+.|+++|++++|+||++ ...++..++.+   |+..+|+.++.   ..+|+|+.|+.+++++|++ |+
T Consensus        66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~---gl~~~f~~~~~---~~~~k~~~~~~~~~~~~~~-~~  138 (187)
T 2wm8_A           66 DVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELF---DLFRYFVHREI---YPGSKITHFERLQQKTGIP-FS  138 (187)
T ss_dssp             EECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHT---TCTTTEEEEEE---SSSCHHHHHHHHHHHHCCC-GG
T ss_pred             ccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHc---CcHhhcceeEE---EeCchHHHHHHHHHHcCCC-hH
Confidence            34689999999999999999999999999 78899999999   99999998752   2368899999999999997 99


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEEEEeCCC
Q 009774          479 EILFVTDVYQEATAAKAAGLEVVISIRPG  507 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i~v~~~~  507 (526)
                      +|+||||+.+|+.+|+++|+.+|++.++.
T Consensus       139 ~~~~igD~~~Di~~a~~aG~~~i~v~~g~  167 (187)
T 2wm8_A          139 QMIFFDDERRNIVDVSKLGVTCIHIQNGM  167 (187)
T ss_dssp             GEEEEESCHHHHHHHHTTTCEEEECSSSC
T ss_pred             HEEEEeCCccChHHHHHcCCEEEEECCCC
Confidence            99999999999999999999999999874

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.75  E-value=4.2e-18  Score=160.21  Aligned_cols=120  Identities=13%  Similarity=0.105  Sum_probs=94.4

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcc--cccceEE--eC------CcCCCCCHHHHHHHHHH
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR--KYLSGFF--DT------AVGNKRETPSYVEITNS  471 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~--~~fd~i~--~~------~~~~KP~p~~~~~~~~~  471 (526)
                      .++||+.++|+.|+++|++++|+||++...++..++.+   |+.  .+|...+  +.      ....||+|..+..++.+
T Consensus        82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  158 (219)
T 3kd3_A           82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYL---NIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDK  158 (219)
T ss_dssp             TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHH---TCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHH
T ss_pred             cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHc---CCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHH
Confidence            58999999999999999999999999999999999999   773  4555322  21      24578888777776655


Q ss_pred             -cCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC-CCCCC-CCCCCCeEecCCCCC
Q 009774          472 -LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP-GNGPL-PENHGFKTINSFAEI  526 (526)
Q Consensus       472 -l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~-~~~~~-~~~~~~~~i~~l~eL  526 (526)
                       +|++ |++|++|||+.+|+.++ ++|+.++++.++ ++... ....++++++++.||
T Consensus       159 ~~~~~-~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el  214 (219)
T 3kd3_A          159 AKGLI-DGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVAEL  214 (219)
T ss_dssp             HGGGC-CSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHH
T ss_pred             HhCCC-CCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHH
Confidence             5997 99999999999999998 689998888876 33221 122348899888764

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.75  E-value=2.3e-18  Score=166.21  Aligned_cols=115  Identities=12%  Similarity=0.092  Sum_probs=89.0

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcC--------CCCCHHH-HH---
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVG--------NKRETPS-YV---  466 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~--------~KP~p~~-~~---  466 (526)
                      .+++||+.++|+.|+++|++++|+||++...++.+++     ++.++ +.++  +....        .||+|.. |.   
T Consensus        76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~-----~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~  149 (236)
T 2fea_A           76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE-----GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCG  149 (236)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT-----TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCS
T ss_pred             CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh-----cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccC
Confidence            4799999999999999999999999999998888887     45454 7777  22222        7999984 55   


Q ss_pred             ----HHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCC-CC-CCCeEecCCCC
Q 009774          467 ----EITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLP-EN-HGFKTINSFAE  525 (526)
Q Consensus       467 ----~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~-~~-~~~~~i~~l~e  525 (526)
                          .++++++++ |++|+||||+.+|+.+|+++|+.++.  ++. .... .. .++.+++++.|
T Consensus       150 ~~K~~~~~~~~~~-~~~~~~vGDs~~Di~~a~~aG~~~~~--~~~-~~~~~~~~~~~~~~~~~~e  210 (236)
T 2fea_A          150 CCKPSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFAR--DYL-LNECREQNLNHLPYQDFYE  210 (236)
T ss_dssp             SCHHHHHHHHCCT-TCEEEEEECCGGGHHHHHTCSEEEEC--HHH-HHHHHHTTCCEECCSSHHH
T ss_pred             CcHHHHHHHHhcc-CCeEEEEeCChHHHHHHHhCCeeeec--hHH-HHHHHHCCCCeeecCCHHH
Confidence                899999997 99999999999999999999998863  221 1111 11 14677777655

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.75  E-value=3e-19  Score=171.71  Aligned_cols=122  Identities=15%  Similarity=0.047  Sum_probs=97.0

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEE---------------------------------EEeCchHHHHHHHHhhcCCCC-cc
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVY---------------------------------IYSSGSRLAQRLIFGNSNYGD-LR  445 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~---------------------------------vvTn~~~~~~~~~l~~l~~~g-l~  445 (526)
                      ...++|++.++|+.|+++|++++                                 ++||.+ ......++.+   + +.
T Consensus        85 ~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~~~~~~~---~~~~  160 (250)
T 2c4n_A           85 KKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGRGFYPAC---GALC  160 (250)
T ss_dssp             CEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSSTTCBCH---HHHH
T ss_pred             CEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCCCeeecc---hHHH
Confidence            34688999999999999999999                                 999987 3333333444   4 55


Q ss_pred             cccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecC-HhhHHHHHHcCCcEEEEeCCCCC-CCCC---CCCCe
Q 009774          446 KYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDV-YQEATAAKAAGLEVVISIRPGNG-PLPE---NHGFK  518 (526)
Q Consensus       446 ~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs-~~Di~~A~~aG~~~i~v~~~~~~-~~~~---~~~~~  518 (526)
                      .+|+.+.  +.....||+|..|..+++++|++ |++|++|||+ .+|+.+|+.+|+.++++.++... +...   ..+++
T Consensus       161 ~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~-~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~  239 (250)
T 2c4n_A          161 AGIEKISGRKPFYVGKPSPWIIRAALNKMQAH-SEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSW  239 (250)
T ss_dssp             HHHHHHHCCCCEECSTTSTHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSE
T ss_pred             HHHHHHhCCCceEeCCCCHHHHHHHHHHcCCC-cceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCE
Confidence            5666554  34567899999999999999997 9999999999 69999999999999999987433 2222   34589


Q ss_pred             EecCCCCC
Q 009774          519 TINSFAEI  526 (526)
Q Consensus       519 ~i~~l~eL  526 (526)
                      +++++.||
T Consensus       240 v~~~~~el  247 (250)
T 2c4n_A          240 IYPSVAEI  247 (250)
T ss_dssp             EESSGGGC
T ss_pred             EECCHHHh
Confidence            99998875

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.75  E-value=1.3e-17  Score=156.79  Aligned_cols=98  Identities=12%  Similarity=0.076  Sum_probs=85.9

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccc-eEE-e-CCc--CC-CCCHHHHHHHHHHcC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS-GFF-D-TAV--GN-KRETPSYVEITNSLG  473 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd-~i~-~-~~~--~~-KP~p~~~~~~~~~l~  473 (526)
                      ..+++||+.++|+.|+++ ++++|+||++....+.+++.+   |+..+|+ .+. . +..  .. ||+|+.|..++++++
T Consensus        67 ~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~---gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~  142 (206)
T 1rku_A           67 TLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQL---GFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFK  142 (206)
T ss_dssp             TCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHT---TCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHH
T ss_pred             hcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHc---CCcceecceeEEcCCceEEeeecCCCchHHHHHHHHH
Confidence            357899999999999999 999999999999999999999   9999995 444 2 221  22 599999999999999


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774          474 VDKPSEILFVTDVYQEATAAKAAGLEVVI  502 (526)
Q Consensus       474 ~~~p~~~l~VgDs~~Di~~A~~aG~~~i~  502 (526)
                      +. |++|+||||+.+|+.+|+++|+.+++
T Consensus       143 ~~-~~~~~~iGD~~~Di~~a~~aG~~~~~  170 (206)
T 1rku_A          143 SL-YYRVIAAGDSYNDTTMLSEAHAGILF  170 (206)
T ss_dssp             HT-TCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred             hc-CCEEEEEeCChhhHHHHHhcCccEEE
Confidence            97 99999999999999999999998663

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.73  E-value=8.7e-19  Score=166.75  Aligned_cols=96  Identities=13%  Similarity=0.122  Sum_probs=80.0

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE---e--CCcCCCCCHHHHHHHHHHcCCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF---D--TAVGNKRETPSYVEITNSLGVDK  476 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~---~--~~~~~KP~p~~~~~~~~~l~~~~  476 (526)
                      .++|++.++|+.|+++|++++|+||++....+..++.     +.++|+.++   +  .....||+|++|+++++++|+  
T Consensus        88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~-----l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~--  160 (211)
T 2b82_A           88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT-----LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI--  160 (211)
T ss_dssp             EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH-----HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE--
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-----HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC--
Confidence            3678999999999999999999999986654444443     335666653   1  234589999999999999988  


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCcEEEEeCCC
Q 009774          477 PSEILFVTDVYQEATAAKAAGLEVVISIRPG  507 (526)
Q Consensus       477 p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~  507 (526)
                         |+||||+..|+.+|+++||.+|++.++.
T Consensus       161 ---~l~VGDs~~Di~aA~~aG~~~i~v~~g~  188 (211)
T 2b82_A          161 ---RIFYGDSDNDITAARDVGARGIRILRAS  188 (211)
T ss_dssp             ---EEEEESSHHHHHHHHHTTCEEEECCCCT
T ss_pred             ---EEEEECCHHHHHHHHHCCCeEEEEecCC
Confidence               9999999999999999999999999873

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.73  E-value=1.5e-17  Score=174.44  Aligned_cols=98  Identities=17%  Similarity=0.162  Sum_probs=88.6

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE------------eCCcCCCCCHHHHHHH
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------------DTAVGNKRETPSYVEI  468 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~------------~~~~~~KP~p~~~~~~  468 (526)
                      .+++||+.++|+.|+++|++++|+||+....++.+++.+   |+..+|+..+            +.....||+|+.|+++
T Consensus       255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~l---gl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~  331 (415)
T 3p96_A          255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEEL---MLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREF  331 (415)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT---TCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHH
T ss_pred             CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHc---CccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHH
Confidence            479999999999999999999999999999999999999   8988877543            1233479999999999


Q ss_pred             HHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774          469 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI  502 (526)
Q Consensus       469 ~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~  502 (526)
                      ++++|++ |++|+||||+.+|+.+|+++|+.+++
T Consensus       332 ~~~~gi~-~~~~i~vGD~~~Di~~a~~aG~~va~  364 (415)
T 3p96_A          332 AQRAGVP-MAQTVAVGDGANDIDMLAAAGLGIAF  364 (415)
T ss_dssp             HHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             HHHcCcC-hhhEEEEECCHHHHHHHHHCCCeEEE
Confidence            9999997 99999999999999999999998776

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.73  E-value=7.1e-19  Score=171.24  Aligned_cols=119  Identities=14%  Similarity=0.109  Sum_probs=97.0

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccc---eEE--eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS---GFF--DTAVGNKRETPSYVEITNSLGVDK  476 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd---~i~--~~~~~~KP~p~~~~~~~~~l~~~~  476 (526)
                      .++|++.++|+.|+ +|+++ ++||.+.......+..+   ++..+|+   .++  +.....||+|++|+.+++++|++ 
T Consensus       122 ~~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~-  195 (259)
T 2ho4_A          122 FHYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLAL---GPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCA-  195 (259)
T ss_dssp             CBHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEE---CSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCC-
T ss_pred             CCHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCccc---CCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCC-
Confidence            37899999999999 89999 99999876555556666   7888887   333  34567899999999999999997 


Q ss_pred             CCcEEEEecCH-hhHHHHHHcCCcEEEEeCCC-CCCCC---CCCCCeEecCCCCC
Q 009774          477 PSEILFVTDVY-QEATAAKAAGLEVVISIRPG-NGPLP---ENHGFKTINSFAEI  526 (526)
Q Consensus       477 p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~-~~~~~---~~~~~~~i~~l~eL  526 (526)
                      |++|++|||+. +|+.+|+++|+.+|++.++. .....   ...++++++++.||
T Consensus       196 ~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l  250 (259)
T 2ho4_A          196 PEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHA  250 (259)
T ss_dssp             GGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHH
T ss_pred             hHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHH
Confidence            99999999999 99999999999999999873 22221   23458899988763

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.72  E-value=2.3e-19  Score=168.54  Aligned_cols=105  Identities=19%  Similarity=0.228  Sum_probs=88.8

Q ss_pred             cCccCCCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHhhcCCCCccc-ccceEEeCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSL-GTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~-G~~l~vvTn~~~~~~~~~l~~l~~~gl~~-~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|+++ |++++|+||++...++..++++   ++.+ +|+                ..++++++++ |
T Consensus        73 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~---~l~~~~f~----------------~~~~~~l~~~-~  132 (197)
T 1q92_A           73 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKY---AWVEKYFG----------------PDFLEQIVLT-R  132 (197)
T ss_dssp             TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHH---HHHHHHHC----------------GGGGGGEEEC-S
T ss_pred             cCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHh---chHHHhch----------------HHHHHHhccC-C
Confidence            467999999999999999 9999999999998888889998   8887 886                6688999997 9


Q ss_pred             CcEEEEecCHhh----HHHHH-HcCCcEEEEeCCCCCCCCCCCCCeEecCCC
Q 009774          478 SEILFVTDVYQE----ATAAK-AAGLEVVISIRPGNGPLPENHGFKTINSFA  524 (526)
Q Consensus       478 ~~~l~VgDs~~D----i~~A~-~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~  524 (526)
                      ++|+||||+..|    +.+|+ ++||.+|++.++.+...........++++.
T Consensus       133 ~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~  184 (197)
T 1q92_A          133 DKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWA  184 (197)
T ss_dssp             CSTTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTT
T ss_pred             ccEEEECcccccCCchhhhcccCCCceEEEecCcccccccccccchhhhhHH
Confidence            999999999988    99999 999999999987443221111255788884

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.72  E-value=2.6e-17  Score=154.25  Aligned_cols=118  Identities=17%  Similarity=0.181  Sum_probs=92.7

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eC----------CcCCCCCHHHHHHH
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DT----------AVGNKRETPSYVEI  468 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~----------~~~~KP~p~~~~~~  468 (526)
                      ..++|++.++|+.|+++|++++++||++....+..++.+   ++..+|+..+  ..          ....+++|+.+..+
T Consensus        75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~  151 (211)
T 1l7m_A           75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKL---GLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKI  151 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHH---TCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHc---CCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHH
Confidence            467899999999999999999999999988888888888   7777776543  11          12245678999999


Q ss_pred             HHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecC--CCCC
Q 009774          469 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS--FAEI  526 (526)
Q Consensus       469 ~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~--l~eL  526 (526)
                      ++++|++ |++|++|||+.+|+.+|+++|+.+ ++. .  .+.....+++++++  +.||
T Consensus       152 ~~~lgi~-~~~~~~iGD~~~Di~~~~~ag~~~-~~~-~--~~~~~~~a~~v~~~~~~~~l  206 (211)
T 1l7m_A          152 AKIEGIN-LEDTVAVGDGANDISMFKKAGLKI-AFC-A--KPILKEKADICIEKRDLREI  206 (211)
T ss_dssp             HHHHTCC-GGGEEEEECSGGGHHHHHHCSEEE-EES-C--CHHHHTTCSEEECSSCGGGG
T ss_pred             HHHcCCC-HHHEEEEecChhHHHHHHHCCCEE-EEC-C--CHHHHhhcceeecchhHHHH
Confidence            9999997 999999999999999999999964 343 1  11222334788877  7664

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=99.69  E-value=2.5e-18  Score=170.60  Aligned_cols=116  Identities=11%  Similarity=0.094  Sum_probs=95.0

Q ss_pred             CHHHHHHHHHHCCCeEEEEeCchHHHH--H--HHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHc----CCC
Q 009774          406 DVPEALEKWHSLGTKVYIYSSGSRLAQ--R--LIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSL----GVD  475 (526)
Q Consensus       406 gv~~~L~~L~~~G~~l~vvTn~~~~~~--~--~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l----~~~  475 (526)
                      ...++++.|+++|++ +|+||++....  .  ..++..   ++..+|+.++  +.....||+|++|+.+++++    |++
T Consensus       149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~---~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~  224 (284)
T 2hx1_A          149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIG---GVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEIS  224 (284)
T ss_dssp             HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHH---HHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCC
T ss_pred             cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCC---hHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCC
Confidence            567777799999999 99999987654  2  123455   7888999887  34667899999999999999    997


Q ss_pred             CCCcEEEEecCH-hhHHHHHHcCCcEEEEeCCCC-CCCCC-------CCCCeEecCCCCC
Q 009774          476 KPSEILFVTDVY-QEATAAKAAGLEVVISIRPGN-GPLPE-------NHGFKTINSFAEI  526 (526)
Q Consensus       476 ~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~-~~~~~-------~~~~~~i~~l~eL  526 (526)
                       |++|+||||++ +|+.+|+++||.+|++.++.. .....       ..++++++++.||
T Consensus       225 -~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el  283 (284)
T 2hx1_A          225 -KREILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE  283 (284)
T ss_dssp             -GGGEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred             -cceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence             99999999996 999999999999999999833 22222       3459999999986

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.69  E-value=7.8e-19  Score=164.28  Aligned_cols=107  Identities=11%  Similarity=0.124  Sum_probs=87.5

Q ss_pred             cCccCCCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSL-GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~-G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      ..+++||+.++|+.|+++ |++++|+||++...++..++.+   |+   |+.++..            .+++++|++ |+
T Consensus        71 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~---gl---f~~i~~~------------~~~~~~~~~-~~  131 (193)
T 2i7d_A           71 DLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKY---RW---VEQHLGP------------QFVERIILT-RD  131 (193)
T ss_dssp             TCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHH---HH---HHHHHCH------------HHHTTEEEC-SC
T ss_pred             cCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHh---Cc---hhhhcCH------------HHHHHcCCC-cc
Confidence            457999999999999999 9999999999998888899998   77   7766521            278999997 99


Q ss_pred             cEEEEecCHhh----HHHHH-HcCCcEEEEeCCCCCCCCCCCCCeEecCCCC
Q 009774          479 EILFVTDVYQE----ATAAK-AAGLEVVISIRPGNGPLPENHGFKTINSFAE  525 (526)
Q Consensus       479 ~~l~VgDs~~D----i~~A~-~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e  525 (526)
                      +|+||||+..|    +.+|+ ++||.+|++.++.+...........++++.|
T Consensus       132 ~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~  183 (193)
T 2i7d_A          132 KTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHLVLPPTRRRLLSWSD  183 (193)
T ss_dssp             GGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGGGTTCCCCTTSCEECSTTS
T ss_pred             cEEEECCchhhCcHHHhhcccccccceEEEEeccCcccccccchHHHhhHHH
Confidence            99999999988    99999 9999999998874332211112457888843

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.68  E-value=7.8e-18  Score=152.70  Aligned_cols=109  Identities=11%  Similarity=0.094  Sum_probs=87.6

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEE
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILF  482 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~  482 (526)
                      +.|++.++|+.|+++|++++|+||++....+..++.+   |+..+|+.       .||+|+.|..++++++++ |++|+|
T Consensus        37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~---gl~~~~~~-------~kp~~~~~~~~~~~~~~~-~~~~~~  105 (162)
T 2p9j_A           37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKEL---GVEEIYTG-------SYKKLEIYEKIKEKYSLK-DEEIGF  105 (162)
T ss_dssp             EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHT---TCCEEEEC-------C--CHHHHHHHHHHTTCC-GGGEEE
T ss_pred             ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHc---CCHhhccC-------CCCCHHHHHHHHHHcCCC-HHHEEE
Confidence            3466779999999999999999999999999999999   88776653       699999999999999997 999999


Q ss_pred             EecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCC
Q 009774          483 VTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE  525 (526)
Q Consensus       483 VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e  525 (526)
                      |||+.+|+.+|+++|+.+++. ++  .+.....++++++++.+
T Consensus       106 vGD~~~Di~~a~~ag~~~~~~-~~--~~~~~~~a~~v~~~~~~  145 (162)
T 2p9j_A          106 IGDDVVDIEVMKKVGFPVAVR-NA--VEEVRKVAVYITQRNGG  145 (162)
T ss_dssp             EECSGGGHHHHHHSSEEEECT-TS--CHHHHHHCSEECSSCSS
T ss_pred             ECCCHHHHHHHHHCCCeEEec-Cc--cHHHHhhCCEEecCCCC
Confidence            999999999999999987643 22  11111234777777654

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.66  E-value=2.8e-16  Score=164.57  Aligned_cols=96  Identities=13%  Similarity=0.253  Sum_probs=84.7

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCch------------HHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHH
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGS------------RLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEI  468 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~------------~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~  468 (526)
                      ++||+.++|+.|+++|++++|+||++            ...+...++.+   |+.  |+.++  +.....||+|++|+.+
T Consensus        88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~l---gl~--fd~i~~~~~~~~~KP~p~~~~~a  162 (416)
T 3zvl_A           88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKL---GVP--FQVLVATHAGLNRKPVSGMWDHL  162 (416)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHH---TSC--CEEEEECSSSTTSTTSSHHHHHH
T ss_pred             hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHc---CCC--EEEEEECCCCCCCCCCHHHHHHH
Confidence            78999999999999999999999976            22367788888   774  88887  4577899999999999


Q ss_pred             HHHcC----CCCCCcEEEEecCH-----------------hhHHHHHHcCCcEEEEe
Q 009774          469 TNSLG----VDKPSEILFVTDVY-----------------QEATAAKAAGLEVVISI  504 (526)
Q Consensus       469 ~~~l~----~~~p~~~l~VgDs~-----------------~Di~~A~~aG~~~i~v~  504 (526)
                      ++++|    ++ |++|+||||+.                 .|+.+|+++|+.++...
T Consensus       163 ~~~l~~~~~v~-~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~pe  218 (416)
T 3zvl_A          163 QEQANEGIPIS-VEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATPE  218 (416)
T ss_dssp             HHHSSTTCCCC-GGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECHH
T ss_pred             HHHhCCCCCCC-HHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCcH
Confidence            99998    97 99999999997                 89999999999987543

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.65  E-value=9.7e-17  Score=149.08  Aligned_cols=113  Identities=15%  Similarity=0.063  Sum_probs=90.1

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE-eC--CcCCCCCHHHHHHHHHHcCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DT--AVGNKRETPSYVEITNSLGVDK  476 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~-~~--~~~~KP~p~~~~~~~~~l~~~~  476 (526)
                      ...++||+.++|+.|+++|++++|+||++....+.. +.+   |+..+|+.+. .+  ....+|.|.....+++++  + 
T Consensus        77 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~-  149 (201)
T 4ap9_A           77 KVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KEL---GDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--R-  149 (201)
T ss_dssp             GCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTT---SSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--T-
T ss_pred             hCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHc---CchhheeeEEeeCCceECCcCCccCHHHHHHhc--C-
Confidence            347999999999999999999999999999888888 888   8888766555 22  222567766667788888  7 


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          477 PSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       477 p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      |++|++|||+.+|+.+|+++|+. +++.+...      .++++++|+.||
T Consensus       150 ~~~~i~iGD~~~Di~~~~~ag~~-v~~~~~~~------~ad~v~~~~~el  192 (201)
T 4ap9_A          150 DGFILAMGDGYADAKMFERADMG-IAVGREIP------GADLLVKDLKEL  192 (201)
T ss_dssp             TSCEEEEECTTCCHHHHHHCSEE-EEESSCCT------TCSEEESSHHHH
T ss_pred             cCcEEEEeCCHHHHHHHHhCCce-EEECCCCc------cccEEEccHHHH
Confidence            99999999999999999999996 55544322      447888887653

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.65  E-value=6.3e-16  Score=157.24  Aligned_cols=99  Identities=20%  Similarity=0.225  Sum_probs=89.5

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE------------eCCcCCCCCHHHHHH
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------------DTAVGNKRETPSYVE  467 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~------------~~~~~~KP~p~~~~~  467 (526)
                      ..+++||+.++|+.|+++|++++|+||+.....+.+++.+   |+..+|+..+            +.....||+|+.|+.
T Consensus       176 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~l---gl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~  252 (335)
T 3n28_A          176 TLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQL---SLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLT  252 (335)
T ss_dssp             TCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHH---TCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHH
T ss_pred             hCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHc---CCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHH
Confidence            3579999999999999999999999999999999999999   8988888654            134456999999999


Q ss_pred             HHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774          468 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI  502 (526)
Q Consensus       468 ~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~  502 (526)
                      +++++|++ |++|++|||+.+|+.+|+++|+.+++
T Consensus       253 ~~~~lgi~-~~~~v~vGDs~nDi~~a~~aG~~va~  286 (335)
T 3n28_A          253 LAQQYDVE-IHNTVAVGDGANDLVMMAAAGLGVAY  286 (335)
T ss_dssp             HHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             HHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEEe
Confidence            99999997 99999999999999999999998776

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=99.64  E-value=4e-17  Score=160.20  Aligned_cols=118  Identities=14%  Similarity=0.115  Sum_probs=94.1

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHH--HHHHhh-cCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQ--RLIFGN-SNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVD  475 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~--~~~l~~-l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~  475 (526)
                      ..+||++.++|+.|+ +|+++ |+||++....  ...+.. .   ++..+|+.++  +.....||+|++|+.++++  ++
T Consensus       129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~---~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~  201 (263)
T 1zjj_A          129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAG---SIIAALKVATNVEPIIIGKPNEPMYEVVREM--FP  201 (263)
T ss_dssp             TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHH---HHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--ST
T ss_pred             CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcH---HHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CC
Confidence            467899999999999 89998 9999987543  222332 3   6777888877  3456789999999999999  87


Q ss_pred             CCCcEEEEecCH-hhHHHHHHcCCcEEEEeCCCCC-CCCC---CCCCeEecCCCCC
Q 009774          476 KPSEILFVTDVY-QEATAAKAAGLEVVISIRPGNG-PLPE---NHGFKTINSFAEI  526 (526)
Q Consensus       476 ~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~-~~~~---~~~~~~i~~l~eL  526 (526)
                       |++|+||||++ +|+.+|+++|+.++++.++... ....   ..++++++++.||
T Consensus       202 -~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el  256 (263)
T 1zjj_A          202 -GEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYEL  256 (263)
T ss_dssp             -TCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGG
T ss_pred             -cccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHH
Confidence             99999999996 9999999999999999987432 1111   2458999998875

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=99.63  E-value=2.3e-16  Score=149.83  Aligned_cols=100  Identities=13%  Similarity=0.131  Sum_probs=83.2

Q ss_pred             HHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhh
Q 009774          410 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE  489 (526)
Q Consensus       410 ~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~D  489 (526)
                      +|+.|+++|++++|+||.+....+..++.+   |+..+|+.+       ||+|+.++.+++++|++ |++|+||||+.+|
T Consensus        84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~l---gi~~~f~~~-------k~K~~~l~~~~~~lg~~-~~~~~~vGDs~nD  152 (211)
T 3ij5_A           84 GIRCLITSDIDVAIITGRRAKLLEDRANTL---GITHLYQGQ-------SDKLVAYHELLATLQCQ-PEQVAYIGDDLID  152 (211)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHH---TCCEEECSC-------SSHHHHHHHHHHHHTCC-GGGEEEEECSGGG
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHHHHc---CCchhhccc-------CChHHHHHHHHHHcCcC-cceEEEEcCCHHH
Confidence            899999999999999999999999999999   887777654       89999999999999997 9999999999999


Q ss_pred             HHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCC
Q 009774          490 ATAAKAAGLEVVISIRPGNGPLPENHGFKTINSF  523 (526)
Q Consensus       490 i~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l  523 (526)
                      +.+++++|+.++..+   ..+.....+++++.+.
T Consensus       153 i~~~~~ag~~~a~~~---~~~~~~~~Ad~v~~~~  183 (211)
T 3ij5_A          153 WPVMAQVGLSVAVAD---AHPLLLPKAHYVTRIK  183 (211)
T ss_dssp             HHHHTTSSEEEECTT---SCTTTGGGSSEECSSC
T ss_pred             HHHHHHCCCEEEeCC---ccHHHHhhCCEEEeCC
Confidence            999999998765322   1222223346666654

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.63  E-value=1.3e-16  Score=144.80  Aligned_cols=82  Identities=18%  Similarity=0.209  Sum_probs=76.1

Q ss_pred             HHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhh
Q 009774          410 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE  489 (526)
Q Consensus       410 ~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~D  489 (526)
                      +|+.|+++|++++|+||.+....+..++++   |+..+|+..       ||+|+.|..++++++++ |++|+||||+.+|
T Consensus        39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~---gl~~~~~~~-------kpk~~~~~~~~~~~~~~-~~~~~~vGD~~~D  107 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKL---KVDYLFQGV-------VDKLSAAEELCNELGIN-LEQVAYIGDDLND  107 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSCCHHHHHHHHHT---TCSEEECSC-------SCHHHHHHHHHHHHTCC-GGGEEEECCSGGG
T ss_pred             HHHHHHHCCCEEEEEeCCChHHHHHHHHHc---CCCEeeccc-------CChHHHHHHHHHHcCCC-HHHEEEECCCHHH
Confidence            799999999999999999999999999999   887766653       99999999999999997 9999999999999


Q ss_pred             HHHHHHcCCcEEE
Q 009774          490 ATAAKAAGLEVVI  502 (526)
Q Consensus       490 i~~A~~aG~~~i~  502 (526)
                      +.+|+++|+.++.
T Consensus       108 i~~~~~ag~~~~~  120 (164)
T 3e8m_A          108 AKLLKRVGIAGVP  120 (164)
T ss_dssp             HHHHTTSSEEECC
T ss_pred             HHHHHHCCCeEEc
Confidence            9999999997765

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.62  E-value=2.9e-17  Score=161.36  Aligned_cols=120  Identities=13%  Similarity=0.121  Sum_probs=92.8

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHH---HHhhcCCCCcccccceEE--eC-CcCCCCCHHHHHHHHHHcCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRL---IFGNSNYGDLRKYLSGFF--DT-AVGNKRETPSYVEITNSLGV  474 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~---~l~~l~~~gl~~~fd~i~--~~-~~~~KP~p~~~~~~~~~l~~  474 (526)
                      ..++|++.++|+.| +.|+++ ++||.+......   .++..   ++..+|+.++  +. ....||+|..|..+++++|+
T Consensus       136 ~~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi  210 (271)
T 1vjr_A          136 TLTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAG---SIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGV  210 (271)
T ss_dssp             TCCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHH---HHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTC
T ss_pred             CcCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCcccccc---HHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCC
Confidence            35789999999999 789998 999986542211   22333   5666777665  44 66789999999999999999


Q ss_pred             CCCCcEEEEecCH-hhHHHHHHcCCcEEEEeCCCCCC-CCC---CCCCeEecCCCCC
Q 009774          475 DKPSEILFVTDVY-QEATAAKAAGLEVVISIRPGNGP-LPE---NHGFKTINSFAEI  526 (526)
Q Consensus       475 ~~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~~-~~~---~~~~~~i~~l~eL  526 (526)
                      + |++|++|||++ +|+.+|+++|+.++++.++.... ...   ..++++++++.||
T Consensus       211 ~-~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el  266 (271)
T 1vjr_A          211 P-KERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGEL  266 (271)
T ss_dssp             C-GGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHH
T ss_pred             C-CceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHH
Confidence            7 99999999995 99999999999999999974321 111   2458899988764

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=99.62  E-value=4.2e-17  Score=163.77  Aligned_cols=121  Identities=14%  Similarity=0.135  Sum_probs=97.3

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHH--H-HHHhhcCCCC-cccccceEE--eCCcCCCCCHHHHHHHHHHcCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQ--R-LIFGNSNYGD-LRKYLSGFF--DTAVGNKRETPSYVEITNSLGV  474 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~--~-~~l~~l~~~g-l~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~  474 (526)
                      ..+||++.++|+.|+++|+ ++++||.+....  . ..+..+   | +..+|+.++  +.....||+|.+|..+++++|+
T Consensus       155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~---g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi  230 (306)
T 2oyc_A          155 HFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGT---GSLAAAVETASGRQALVVGKPSPYMFECITENFSI  230 (306)
T ss_dssp             TCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECH---HHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCC
T ss_pred             CCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCC---cHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCC
Confidence            4578999999999999999 999999986543  1 233334   4 667787776  4467789999999999999999


Q ss_pred             CCCCcEEEEecCH-hhHHHHHHcCCcEEEEeCCCCCC-CC---------CCCCCeEecCCCCC
Q 009774          475 DKPSEILFVTDVY-QEATAAKAAGLEVVISIRPGNGP-LP---------ENHGFKTINSFAEI  526 (526)
Q Consensus       475 ~~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~~-~~---------~~~~~~~i~~l~eL  526 (526)
                      + |++|+||||++ +|+.+|+++|+.++++.++.... ..         ...++++++++.||
T Consensus       231 ~-~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el  292 (306)
T 2oyc_A          231 D-PARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADL  292 (306)
T ss_dssp             C-GGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGG
T ss_pred             C-hHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHH
Confidence            7 99999999997 99999999999999999974321 11         12458999998875

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.61  E-value=2.1e-16  Score=146.23  Aligned_cols=106  Identities=10%  Similarity=0.122  Sum_probs=86.3

Q ss_pred             CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 009774          405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVT  484 (526)
Q Consensus       405 pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~Vg  484 (526)
                      +...++|+.|+++|++++++||.+...++..++.+   |+..+|+       ..||+|+.|..++++++++ |++|+|||
T Consensus        38 ~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~l---gl~~~~~-------~~k~k~~~~~~~~~~~~~~-~~~~~~vG  106 (180)
T 1k1e_A           38 VRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADL---GIKLFFL-------GKLEKETACFDLMKQAGVT-AEQTAYIG  106 (180)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHH---TCCEEEE-------SCSCHHHHHHHHHHHHTCC-GGGEEEEE
T ss_pred             cchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHc---CCceeec-------CCCCcHHHHHHHHHHcCCC-HHHEEEEC
Confidence            44558999999999999999999999999999999   8877663       3599999999999999997 99999999


Q ss_pred             cCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCC
Q 009774          485 DVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA  524 (526)
Q Consensus       485 Ds~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~  524 (526)
                      |+.+|+.+++++|+.++..+ +  .+.....+++++.+..
T Consensus       107 D~~~Di~~~~~ag~~~~~~~-~--~~~~~~~ad~v~~~~~  143 (180)
T 1k1e_A          107 DDSVDLPAFAACGTSFAVAD-A--PIYVKNAVDHVLSTHG  143 (180)
T ss_dssp             CSGGGHHHHHHSSEEEECTT-S--CHHHHTTSSEECSSCT
T ss_pred             CCHHHHHHHHHcCCeEEeCC-c--cHHHHhhCCEEecCCC
Confidence            99999999999999877532 1  1112223467776653

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.60  E-value=3.6e-16  Score=145.95  Aligned_cols=81  Identities=10%  Similarity=0.130  Sum_probs=75.2

Q ss_pred             HHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhh
Q 009774          410 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE  489 (526)
Q Consensus       410 ~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~D  489 (526)
                      +|+.|+++|++++|+||.+...++.+++.+   |+.++|+.+       +++|+.++.+++++|++ |++|+||||+.+|
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~l---gl~~~f~~~-------~~K~~~~~~~~~~~g~~-~~~~~~vGD~~nD  122 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKTAIVERRAKSL---GIEHLFQGR-------EDKLVVLDKLLAELQLG-YEQVAYLGDDLPD  122 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHH---TCSEEECSC-------SCHHHHHHHHHHHHTCC-GGGEEEEECSGGG
T ss_pred             HHHHHHHCCCEEEEEECcChHHHHHHHHHc---CCHHHhcCc-------CChHHHHHHHHHHcCCC-hhHEEEECCCHHH
Confidence            899999999999999999999999999999   888777764       77789999999999997 9999999999999


Q ss_pred             HHHHHHcCCcEE
Q 009774          490 ATAAKAAGLEVV  501 (526)
Q Consensus       490 i~~A~~aG~~~i  501 (526)
                      +.+++++|+.++
T Consensus       123 i~~~~~ag~~~~  134 (189)
T 3mn1_A          123 LPVIRRVGLGMA  134 (189)
T ss_dssp             HHHHHHSSEEEE
T ss_pred             HHHHHHCCCeEE
Confidence            999999998754

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=99.60  E-value=1.2e-15  Score=140.73  Aligned_cols=81  Identities=15%  Similarity=0.229  Sum_probs=73.1

Q ss_pred             HHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhh
Q 009774          410 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE  489 (526)
Q Consensus       410 ~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~D  489 (526)
                      +|+.|+++|++++|+||++...++.+++.+   |+. +|+.       .||+|+.++.++++++++ |++|+||||+.+|
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~l---gi~-~~~~-------~~~k~~~l~~~~~~~~~~-~~~~~~vGD~~nD  114 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQNPVVAARARKL---KIP-VLHG-------IDRKDLALKQWCEEQGIA-PERVLYVGNDVND  114 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCCHHHHHHHHHH---TCC-EEES-------CSCHHHHHHHHHHHHTCC-GGGEEEEECSGGG
T ss_pred             HHHHHHHCCCeEEEEECcChHHHHHHHHHc---CCe-eEeC-------CCChHHHHHHHHHHcCCC-HHHEEEEcCCHHH
Confidence            899999999999999999999999999999   776 3322       399999999999999997 9999999999999


Q ss_pred             HHHHHHcCCcEEE
Q 009774          490 ATAAKAAGLEVVI  502 (526)
Q Consensus       490 i~~A~~aG~~~i~  502 (526)
                      +.+++++|+.++.
T Consensus       115 ~~~~~~ag~~v~~  127 (176)
T 3mmz_A          115 LPCFALVGWPVAV  127 (176)
T ss_dssp             HHHHHHSSEEEEC
T ss_pred             HHHHHHCCCeEEC
Confidence            9999999976553

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=99.59  E-value=3.8e-15  Score=146.06  Aligned_cols=71  Identities=10%  Similarity=0.055  Sum_probs=60.8

Q ss_pred             CcCCCCCHHHHHHHHHHcCCCCCCcEEEEecC-HhhHHHHHHcCCcEEEEeCC-CCCCCCCC---CCCeEecCCCCC
Q 009774          455 AVGNKRETPSYVEITNSLGVDKPSEILFVTDV-YQEATAAKAAGLEVVISIRP-GNGPLPEN---HGFKTINSFAEI  526 (526)
Q Consensus       455 ~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs-~~Di~~A~~aG~~~i~v~~~-~~~~~~~~---~~~~~i~~l~eL  526 (526)
                      ....||+|.+|..+++++|++ |++|++|||+ .+|+.+|+++|+.+|++.++ +.......   .++++++++.||
T Consensus       178 ~~~~Kp~~~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l  253 (264)
T 3epr_A          178 VFIGKPNAIIMNKALEILNIP-RNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEW  253 (264)
T ss_dssp             EECSTTSHHHHHHHHHHHTSC-GGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEESCGGGC
T ss_pred             ccCCCCCHHHHHHHHHHhCcC-cccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHH
Confidence            356799999999999999997 9999999999 59999999999999999998 33333322   469999999886

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.58  E-value=2.4e-15  Score=147.35  Aligned_cols=71  Identities=23%  Similarity=0.208  Sum_probs=59.6

Q ss_pred             CcCCCCCHHHHHHHHHHcCCCCCCcEEEEecC-HhhHHHHHHcCCcEEEEeCCC-CCCCCCC---CCCeEecCCCCC
Q 009774          455 AVGNKRETPSYVEITNSLGVDKPSEILFVTDV-YQEATAAKAAGLEVVISIRPG-NGPLPEN---HGFKTINSFAEI  526 (526)
Q Consensus       455 ~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs-~~Di~~A~~aG~~~i~v~~~~-~~~~~~~---~~~~~i~~l~eL  526 (526)
                      ....||+|..|..+++++|++ |++|++|||+ .+|+.+|+++|+.++++.++. ..+....   .++++++++.||
T Consensus       179 ~~~~kp~~~~~~~~~~~lgi~-~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el  254 (266)
T 3pdw_A          179 VFIGKPESIIMEQAMRVLGTD-VSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEW  254 (266)
T ss_dssp             EECSTTSSHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESSGGGG
T ss_pred             cccCCCCHHHHHHHHHHcCCC-hhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHH
Confidence            456899999999999999997 9999999999 699999999999999999983 3333333   369999999885

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=99.57  E-value=6.2e-15  Score=144.53  Aligned_cols=71  Identities=23%  Similarity=0.223  Sum_probs=59.4

Q ss_pred             CcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCH-hhHHHHHHcCCcEEEEeCCCCC-CCCC-------CCCCeEecCCCC
Q 009774          455 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRPGNG-PLPE-------NHGFKTINSFAE  525 (526)
Q Consensus       455 ~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~-~~~~-------~~~~~~i~~l~e  525 (526)
                      ....||+|.+|..+++++|++ |++|++|||++ +|+.+|+++|+.+++|.++... ....       ..++++++++.|
T Consensus       183 ~~~~kp~~~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~e  261 (268)
T 3qgm_A          183 VVVGKPSEVIMREALDILGLD-AKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKD  261 (268)
T ss_dssp             EECSTTSHHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHH
T ss_pred             eecCCCCHHHHHHHHHHhCCC-chhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHH
Confidence            345799999999999999997 99999999995 9999999999999999998433 2222       245899999876


Q ss_pred             C
Q 009774          526 I  526 (526)
Q Consensus       526 L  526 (526)
                      |
T Consensus       262 l  262 (268)
T 3qgm_A          262 M  262 (268)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.57  E-value=5.9e-15  Score=137.43  Aligned_cols=100  Identities=12%  Similarity=0.138  Sum_probs=83.4

Q ss_pred             HHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhh
Q 009774          410 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE  489 (526)
Q Consensus       410 ~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~D  489 (526)
                      +|+.|+++|++++|+||.+....+..++.+   |+..+|+.       .||+|+.|..+++++|++ |++|+||||+.+|
T Consensus        61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~l---gl~~~~~~-------~kpk~~~~~~~~~~~g~~-~~~~~~iGD~~~D  129 (188)
T 2r8e_A           61 GIRCALTSDIEVAIITGRKAKLVEDRCATL---GITHLYQG-------QSNKLIAFSDLLEKLAIA-PENVAYVGDDLID  129 (188)
T ss_dssp             HHHHHHTTTCEEEEECSSCCHHHHHHHHHH---TCCEEECS-------CSCSHHHHHHHHHHHTCC-GGGEEEEESSGGG
T ss_pred             HHHHHHHCCCeEEEEeCCChHHHHHHHHHc---CCceeecC-------CCCCHHHHHHHHHHcCCC-HHHEEEECCCHHH
Confidence            899999999999999999999999999999   87765543       599999999999999997 9999999999999


Q ss_pred             HHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCC
Q 009774          490 ATAAKAAGLEVVISIRPGNGPLPENHGFKTINSF  523 (526)
Q Consensus       490 i~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l  523 (526)
                      +.+|+++|+.+++.+  + .+.....+++++++.
T Consensus       130 i~~a~~ag~~~~~~~--~-~~~~~~~ad~v~~~~  160 (188)
T 2r8e_A          130 WPVMEKVGLSVAVAD--A-HPLLIPRADYVTRIA  160 (188)
T ss_dssp             HHHHTTSSEEEECTT--S-CTTTGGGSSEECSSC
T ss_pred             HHHHHHCCCEEEecC--c-CHHHHhcCCEEEeCC
Confidence            999999999876432  1 122223347777775

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=99.34  E-value=2e-16  Score=155.48  Aligned_cols=111  Identities=18%  Similarity=0.231  Sum_probs=91.6

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      ..+++||+.++|+.|+++|++++++||.+...++.+++.+   |+.++|+.++         |+.+..++++++.+ |++
T Consensus       134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~---gl~~~f~~~~---------p~~k~~~~~~l~~~-~~~  200 (263)
T 2yj3_A          134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKEL---NIQEYYSNLS---------PEDKVRIIEKLKQN-GNK  200 (263)
Confidence            3479999999999999999999999999999999999999   9998888775         55678899999997 999


Q ss_pred             EEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEe--cCCCCC
Q 009774          480 ILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTI--NSFAEI  526 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i--~~l~eL  526 (526)
                      |+||||+.+|+.+|+++|+...|   +.........+++++  +++.+|
T Consensus       201 ~~~VGD~~~D~~aa~~Agv~va~---g~~~~~~~~~ad~v~~~~~l~~l  246 (263)
T 2yj3_A          201 VLMIGDGVNDAAALALADVSVAM---GNGVDISKNVADIILVSNDIGTL  246 (263)
Confidence            99999999999999999975443   311112223347777  777764

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.56  E-value=8.8e-16  Score=149.64  Aligned_cols=119  Identities=13%  Similarity=0.145  Sum_probs=86.4

Q ss_pred             cCCCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHhhcCCCCcccccceE---E--eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774          403 VFDDVPEALEKWHSL-GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGF---F--DTAVGNKRETPSYVEITNSLGVDK  476 (526)
Q Consensus       403 l~pgv~~~L~~L~~~-G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i---~--~~~~~~KP~p~~~~~~~~~l~~~~  476 (526)
                      .++++.+.++.|+++ |+++ ++||.+.......+...   ++..+|+.+   +  +.....||+|..|..+++++|++ 
T Consensus       132 ~~~~~~~~l~~l~~~~~~~~-i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~-  206 (271)
T 2x4d_A          132 SYQNMNNAFQVLMELEKPVL-ISLGKGRYYAATSGLML---DVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVE-  206 (271)
T ss_dssp             CHHHHHHHHHHHHHCSSCCE-EEECCCSEEEETTEEEE---CHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCC-
T ss_pred             CHHHHHHHHHHHHhcCCCeE-EEEcCCcccccCCCccc---ChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCC-
Confidence            356788888888887 8888 77776543322222333   444444322   1  33556899999999999999997 


Q ss_pred             CCcEEEEecCH-hhHHHHHHcCCcEEEEeCCCC-CCC-C--CCCCCeEecCCCCC
Q 009774          477 PSEILFVTDVY-QEATAAKAAGLEVVISIRPGN-GPL-P--ENHGFKTINSFAEI  526 (526)
Q Consensus       477 p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~-~~~-~--~~~~~~~i~~l~eL  526 (526)
                      |++|++|||+. +|+.+|+++|+.++++.++.. ... .  ...++++++++.||
T Consensus       207 ~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el  261 (271)
T 2x4d_A          207 AHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEA  261 (271)
T ss_dssp             GGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHH
T ss_pred             cceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHH
Confidence            99999999998 999999999999999998732 221 1  13358999988763

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=99.56  E-value=2.2e-15  Score=141.27  Aligned_cols=83  Identities=12%  Similarity=0.199  Sum_probs=75.4

Q ss_pred             HHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHh
Q 009774          409 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQ  488 (526)
Q Consensus       409 ~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~  488 (526)
                      ..|+.|+++|++++|+||++...++.+++.+   |+..+|+.+       ||+|..++.++++++++ |++|+||||+.+
T Consensus        59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~l---gi~~~~~~~-------k~k~~~~~~~~~~~~~~-~~~~~~vGD~~n  127 (195)
T 3n07_A           59 YGVKALMNAGIEIAIITGRRSQIVENRMKAL---GISLIYQGQ-------DDKVQAYYDICQKLAIA-PEQTGYIGDDLI  127 (195)
T ss_dssp             HHHHHHHHTTCEEEEECSSCCHHHHHHHHHT---TCCEEECSC-------SSHHHHHHHHHHHHCCC-GGGEEEEESSGG
T ss_pred             HHHHHHHHCCCEEEEEECcCHHHHHHHHHHc---CCcEEeeCC-------CCcHHHHHHHHHHhCCC-HHHEEEEcCCHH
Confidence            3589999999999999999999999999999   887766543       99999999999999997 999999999999


Q ss_pred             hHHHHHHcCCcEEE
Q 009774          489 EATAAKAAGLEVVI  502 (526)
Q Consensus       489 Di~~A~~aG~~~i~  502 (526)
                      |+.+++++|+.++.
T Consensus       128 Di~~~~~ag~~va~  141 (195)
T 3n07_A          128 DWPVMEKVALRVCV  141 (195)
T ss_dssp             GHHHHTTSSEEEEC
T ss_pred             HHHHHHHCCCEEEE
Confidence            99999999987653

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.56  E-value=5.3e-14  Score=139.83  Aligned_cols=109  Identities=16%  Similarity=0.185  Sum_probs=88.1

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      ..+++||+.++|+.|+++|++++|+||++...++.+++.+   |+..+|+.++       |.  ....++++++. + ++
T Consensus       161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~---gl~~~f~~i~-------~~--~K~~~~~~l~~-~-~~  226 (287)
T 3a1c_A          161 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL---NLDLVIAEVL-------PH--QKSEEVKKLQA-K-EV  226 (287)
T ss_dssp             ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH---TCSEEECSCC-------TT--CHHHHHHHHTT-T-CC
T ss_pred             ccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh---CCceeeeecC-------hH--HHHHHHHHHhc-C-Ce
Confidence            3579999999999999999999999999999999999999   8888887664       22  23789999999 5 99


Q ss_pred             EEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEe--cCCCC
Q 009774          480 ILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTI--NSFAE  525 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i--~~l~e  525 (526)
                      |+||||+.+|+.+|+++|+. +.+..+ . +.....+++++  +++.+
T Consensus       227 ~~~vGDs~~Di~~a~~ag~~-v~~~~~-~-~~~~~~ad~v~~~~~~~~  271 (287)
T 3a1c_A          227 VAFVGDGINDAPALAQADLG-IAVGSG-S-DVAVESGDIVLIRDDLRD  271 (287)
T ss_dssp             EEEEECTTTCHHHHHHSSEE-EEECCC-S-CCSSCCSSEEESSSCTHH
T ss_pred             EEEEECCHHHHHHHHHCCee-EEeCCC-C-HHHHhhCCEEEeCCCHHH
Confidence            99999999999999999997 444322 1 22223458888  77765

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.56  E-value=3.4e-15  Score=139.58  Aligned_cols=81  Identities=17%  Similarity=0.323  Sum_probs=75.3

Q ss_pred             HHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhh
Q 009774          410 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE  489 (526)
Q Consensus       410 ~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~D  489 (526)
                      .|+.|+++|++++|+||++...++..++.+   |+..+|+.+       ||+|+.|+.++++++++ |++|+||||+.+|
T Consensus        54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~l---gl~~~~~~~-------kpk~~~~~~~~~~~~~~-~~~~~~vGD~~~D  122 (191)
T 3n1u_A           54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQL---GITHYYKGQ-------VDKRSAYQHLKKTLGLN-DDEFAYIGDDLPD  122 (191)
T ss_dssp             HHHHHHHTTCEEEEECSCCSHHHHHHHHHH---TCCEEECSC-------SSCHHHHHHHHHHHTCC-GGGEEEEECSGGG
T ss_pred             HHHHHHHCCCeEEEEeCcChHHHHHHHHHc---CCccceeCC-------CChHHHHHHHHHHhCCC-HHHEEEECCCHHH
Confidence            588999999999999999999999999999   888776654       99999999999999997 9999999999999


Q ss_pred             HHHHHHcCCcEE
Q 009774          490 ATAAKAAGLEVV  501 (526)
Q Consensus       490 i~~A~~aG~~~i  501 (526)
                      +.+++++|+.++
T Consensus       123 i~~~~~ag~~~~  134 (191)
T 3n1u_A          123 LPLIQQVGLGVA  134 (191)
T ss_dssp             HHHHHHSSEEEE
T ss_pred             HHHHHHCCCEEE
Confidence            999999999874

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.51  E-value=7.7e-15  Score=144.11  Aligned_cols=105  Identities=15%  Similarity=0.173  Sum_probs=79.8

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      .++||+.++|+.|+++|++++|+||.+...++.+++.+   |+.++|+.++  +.....||.|+.             -+
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~---gl~~~f~~~~~~~k~~~~k~~~~~-------------~~  207 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEEL---GLDDYFAEVLPHEKAEKVKEVQQK-------------YV  207 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH---TCSEEECSCCGGGHHHHHHHHHTT-------------SC
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc---CChhHhHhcCHHHHHHHHHHHHhc-------------CC
Confidence            68999999999999999999999999999999999999   9999998887  223334554433             37


Q ss_pred             EEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEe--cCCCC
Q 009774          480 ILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTI--NSFAE  525 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i--~~l~e  525 (526)
                      |++|||+.+|+.+++++|+   .+.++...+.....+++++  +++.+
T Consensus       208 ~~~vGD~~nDi~~~~~Ag~---~va~~~~~~~~~~~a~~~~~~~~~~~  252 (280)
T 3skx_A          208 TAMVGDGVNDAPALAQADV---GIAIGAGTDVAVETADIVLVRNDPRD  252 (280)
T ss_dssp             EEEEECTTTTHHHHHHSSE---EEECSCCSSSCCCSSSEECSSCCTHH
T ss_pred             EEEEeCCchhHHHHHhCCc---eEEecCCcHHHHhhCCEEEeCCCHHH
Confidence            9999999999999999995   4444422222222335555  65543

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=99.50  E-value=1e-13  Score=127.77  Aligned_cols=99  Identities=10%  Similarity=0.115  Sum_probs=70.2

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCc---hH--HHHHHHHhh-cCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSG---SR--LAQRLIFGN-SNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLG  473 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~---~~--~~~~~~l~~-l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~  473 (526)
                      ..+++||+.++|+.|+++ ++++|+||+   +.  ......++. +   +...+|+.+++....             .+ 
T Consensus        67 ~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f---~~~~~~~~i~~~~~~-------------~l-  128 (180)
T 3bwv_A           67 NLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYF---PFLDPQHFVFCGRKN-------------II-  128 (180)
T ss_dssp             SCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHC---TTSCGGGEEECSCGG-------------GB-
T ss_pred             cCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHc---CCCCcccEEEeCCcC-------------ee-
Confidence            457999999999999985 999999999   32  222334444 5   566777887732110             11 


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          474 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       474 ~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                          ++|+|||||+.|+.  .++| .+|++.++.+..   ..++++++++.||
T Consensus       129 ----~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~---~~~~~~i~~~~el  171 (180)
T 3bwv_A          129 ----LADYLIDDNPKQLE--IFEG-KSIMFTASHNVY---EHRFERVSGWRDV  171 (180)
T ss_dssp             ----CCSEEEESCHHHHH--HCSS-EEEEECCGGGTT---CCSSEEECSHHHH
T ss_pred             ----cccEEecCCcchHH--HhCC-CeEEeCCCcccC---CCCceecCCHHHH
Confidence                47999999999985  5689 999998764322   2347888887663

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=99.47  E-value=9.5e-14  Score=135.80  Aligned_cols=97  Identities=19%  Similarity=0.138  Sum_probs=76.6

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCch---HHHHHHHHhhcCCCCcc--cccceEEeCCcCCCCCHHHHHHHHHHcCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFGNSNYGDLR--KYLSGFFDTAVGNKRETPSYVEITNSLGVD  475 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~---~~~~~~~l~~l~~~gl~--~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~  475 (526)
                      .+++||+.++|+.|+++|++++|+||.+   .......++.+   |+.  .+|+.++......||.+  +..++ ..+..
T Consensus       100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~---Gl~~v~~~~vi~~~~~~~K~~~--~~~~~-~~~~~  173 (258)
T 2i33_A          100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERV---GAPQATKEHILLQDPKEKGKEK--RRELV-SQTHD  173 (258)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHH---TCSSCSTTTEEEECTTCCSSHH--HHHHH-HHHEE
T ss_pred             CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHc---CCCcCCCceEEECCCCCCCcHH--HHHHH-HhCCC
Confidence            3689999999999999999999999998   66677788888   887  77887774333356655  33333 34554


Q ss_pred             CCCcEEEEecCHhhHHHHH-------H---------cCCcEEEEeCC
Q 009774          476 KPSEILFVTDVYQEATAAK-------A---------AGLEVVISIRP  506 (526)
Q Consensus       476 ~p~~~l~VgDs~~Di~~A~-------~---------aG~~~i~v~~~  506 (526)
                         .|+||||+.+|+.+|+       +         +|+++|.+.++
T Consensus       174 ---~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~  217 (258)
T 2i33_A          174 ---IVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNP  217 (258)
T ss_dssp             ---EEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCC
T ss_pred             ---ceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCC
Confidence               5999999999999993       4         89999999876

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=99.45  E-value=1e-13  Score=137.55  Aligned_cols=96  Identities=8%  Similarity=-0.008  Sum_probs=81.9

Q ss_pred             ccCCCHHHHHHHHHHC-CCeEEEEeCc---------------------hHHHHHHHHhhcCCCCcccccceE--------
Q 009774          402 EVFDDVPEALEKWHSL-GTKVYIYSSG---------------------SRLAQRLIFGNSNYGDLRKYLSGF--------  451 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~-G~~l~vvTn~---------------------~~~~~~~~l~~l~~~gl~~~fd~i--------  451 (526)
                      .+++++.++|+.|+++ |+++++.|+.                     ........++.+   |+..+|+.+        
T Consensus       122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---g~~~~~~~~~~~~~~~~  198 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEY---GVSVNINRCNPLAGDPE  198 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHH---TEEEEEEECCGGGTCCT
T ss_pred             CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHc---CCCEEEEEccccccCCC
Confidence            3668999999999998 9999999987                     566677788888   888777653        


Q ss_pred             ---E-eCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774          452 ---F-DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       452 ---~-~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                         . +.....||++..++++++++|++ |++|++|||+.+|+.+++.+|+.++
T Consensus       199 ~~~~~~~~~~~~~k~~~~~~~~~~~~~~-~~~~~~~GDs~~D~~~~~~ag~~~~  251 (289)
T 3gyg_A          199 DSYDVDFIPIGTGKNEIVTFMLEKYNLN-TERAIAFGDSGNDVRMLQTVGNGYL  251 (289)
T ss_dssp             TEEEEEEEESCCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHTTSSEEEE
T ss_pred             CceEEEEEeCCCCHHHHHHHHHHHcCCC-hhhEEEEcCCHHHHHHHHhCCcEEE
Confidence               2 55667899999999999999997 9999999999999999999995543

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=99.42  E-value=1.8e-13  Score=136.72  Aligned_cols=100  Identities=12%  Similarity=0.002  Sum_probs=85.3

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHH---HHHHHhh--------cCCCCcccccceEE-eCCcCCCCCHHHHHHH
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLA---QRLIFGN--------SNYGDLRKYLSGFF-DTAVGNKRETPSYVEI  468 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~---~~~~l~~--------l~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~  468 (526)
                      ..+|||+.++|+.|+++|++++|+||++...   ....++.        +   |+  +|+.++ ......||+|+++..+
T Consensus       187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~---~~--~~~~~~~~~~~~~kp~p~~~~~~  261 (301)
T 1ltq_A          187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIA---GV--PLVMQCQREQGDTRKDDVVKEEI  261 (301)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTT---CC--CCSEEEECCTTCCSCHHHHHHHH
T ss_pred             cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhccccccccc---CC--CchheeeccCCCCcHHHHHHHHH
Confidence            4699999999999999999999999998543   3456666        7   77  488877 2223569999999999


Q ss_pred             HHHcCCCCCCc-EEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          469 TNSLGVDKPSE-ILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       469 ~~~l~~~~p~~-~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      +++++.. +.+ |+||||+..|+.+|+++||.+|.|.||
T Consensus       262 ~~~~~~~-~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G  299 (301)
T 1ltq_A          262 FWKHIAP-HFDVKLAIDDRTQVVEMWRRIGVECWQVASG  299 (301)
T ss_dssp             HHHHTTT-TCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred             HHHHhcc-ccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence            9999886 644 799999999999999999999999987

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=99.38  E-value=2.4e-13  Score=124.14  Aligned_cols=78  Identities=15%  Similarity=0.204  Sum_probs=67.1

Q ss_pred             HHHHHHHCCCeEEEEeCchHHHHHHHHh--hcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCH
Q 009774          410 ALEKWHSLGTKVYIYSSGSRLAQRLIFG--NSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVY  487 (526)
Q Consensus       410 ~L~~L~~~G~~l~vvTn~~~~~~~~~l~--~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~  487 (526)
                      .|+.|+++|++++|+||.  ...+..++  .+   ++. +    +   ...+++|+.+..++++++++ |++|+||||+.
T Consensus        44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~l---gi~-~----~---~g~~~K~~~l~~~~~~~gi~-~~~~~~vGD~~  109 (168)
T 3ewi_A           44 GISLLKKSGIEVRLISER--ACSKQTLSALKL---DCK-T----E---VSVSDKLATVDEWRKEMGLC-WKEVAYLGNEV  109 (168)
T ss_dssp             HHHHHHHTTCEEEEECSS--CCCHHHHHTTCC---CCC-E----E---CSCSCHHHHHHHHHHHTTCC-GGGEEEECCSG
T ss_pred             HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCC---CcE-E----E---ECCCChHHHHHHHHHHcCcC-hHHEEEEeCCH
Confidence            689999999999999999  56777888  55   543 2    2   23478899999999999997 99999999999


Q ss_pred             hhHHHHHHcCCcEE
Q 009774          488 QEATAAKAAGLEVV  501 (526)
Q Consensus       488 ~Di~~A~~aG~~~i  501 (526)
                      +|+.+++.+|+.++
T Consensus       110 nDi~~~~~ag~~~a  123 (168)
T 3ewi_A          110 SDEECLKRVGLSAV  123 (168)
T ss_dssp             GGHHHHHHSSEEEE
T ss_pred             hHHHHHHHCCCEEE
Confidence            99999999998855

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=99.23  E-value=5.5e-11  Score=114.00  Aligned_cols=111  Identities=14%  Similarity=0.093  Sum_probs=78.3

Q ss_pred             CCHHHHHHHHH-HC-CCeE-----------EEEe-CchHHHHHHHHhhcCCCCcccccceE-----EeCCcCCCCCHHHH
Q 009774          405 DDVPEALEKWH-SL-GTKV-----------YIYS-SGSRLAQRLIFGNSNYGDLRKYLSGF-----FDTAVGNKRETPSY  465 (526)
Q Consensus       405 pgv~~~L~~L~-~~-G~~l-----------~vvT-n~~~~~~~~~l~~l~~~gl~~~fd~i-----~~~~~~~KP~p~~~  465 (526)
                      +.+.++++.++ +. |+.+           ++++ +.+.+..+..++.+   +  +.|+.+     ++.....||++..+
T Consensus        84 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~ei~~~~~~K~~~~  158 (231)
T 1wr8_A           84 DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINEL---N--LNLVAVDSGFAIHVKKPWINKGSGI  158 (231)
T ss_dssp             SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHT---T--CSCEEEECSSCEEEECTTCCHHHHH
T ss_pred             HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhc---C--CcEEEEecCcEEEEecCCCChHHHH
Confidence            66667777666 44 5443           6677 65677777777776   3  345544     13345679999999


Q ss_pred             HHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCC
Q 009774          466 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA  524 (526)
Q Consensus       466 ~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~  524 (526)
                      +.+++++|++ |++|++|||+.+|+.+++.+|+. +.+.++  .+.....+++++++..
T Consensus       159 ~~~~~~~~~~-~~~~~~iGD~~nD~~~~~~ag~~-v~~~~~--~~~~~~~a~~v~~~~~  213 (231)
T 1wr8_A          159 EKASEFLGIK-PKEVAHVGDGENDLDAFKVVGYK-VAVAQA--PKILKENADYVTKKEY  213 (231)
T ss_dssp             HHHHHHHTSC-GGGEEEEECSGGGHHHHHHSSEE-EECTTS--CHHHHTTCSEECSSCH
T ss_pred             HHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCCe-EEecCC--CHHHHhhCCEEecCCC
Confidence            9999999997 99999999999999999999997 444332  1122223467776643

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=99.22  E-value=2.4e-11  Score=119.57  Aligned_cols=112  Identities=12%  Similarity=0.053  Sum_probs=69.2

Q ss_pred             CHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE------eCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          406 DVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------DTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       406 gv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~------~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      .+.++++.++...+++.++++..  ......+.+.. .+.+.|+.+.      +.....++++..++.+++++|++ |++
T Consensus       140 ~~~~~~~~~~~~~~ki~~~~~~~--~~~~~~~~l~~-~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~-~~~  215 (279)
T 4dw8_A          140 ETNDFLTDITLPVAKCLIVGDAG--KLIPVESELCI-RLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMT-REE  215 (279)
T ss_dssp             ECSCHHHHSCSCCSCEEEESCHH--HHHHHHHHHHH-HTTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCC-GGG
T ss_pred             cHHHHHHhhcCCceEEEEeCCHH--HHHHHHHHHHH-HhcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCC-HHH
Confidence            44455666666777777766432  22223332200 0122344333      33455678899999999999997 999


Q ss_pred             EEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCC
Q 009774          480 ILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA  524 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~  524 (526)
                      |++|||+.+|+.+++.+|+   .+..+...+.....+++++.+..
T Consensus       216 ~i~~GD~~NDi~m~~~ag~---~vam~na~~~~k~~A~~v~~~~~  257 (279)
T 4dw8_A          216 VIAIGDGYNDLSMIKFAGM---GVAMGNAQEPVKKAADYITLTND  257 (279)
T ss_dssp             EEEEECSGGGHHHHHHSSE---EEECTTSCHHHHHHCSEECCCGG
T ss_pred             EEEECCChhhHHHHHHcCc---EEEcCCCcHHHHHhCCEEcCCCC
Confidence            9999999999999999994   44444332222223466665543

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=99.17  E-value=3.6e-12  Score=129.99  Aligned_cols=70  Identities=16%  Similarity=0.076  Sum_probs=55.1

Q ss_pred             cCCCCCHHHHHHHHHHc----------------------CC-----CCCCcEEEEecCH-hhHHHHHHcCCcEEEEeCCC
Q 009774          456 VGNKRETPSYVEITNSL----------------------GV-----DKPSEILFVTDVY-QEATAAKAAGLEVVISIRPG  507 (526)
Q Consensus       456 ~~~KP~p~~~~~~~~~l----------------------~~-----~~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~  507 (526)
                      ..+||+|.+|..+++.+                      |+     + +++|+||||++ +||.+|+++||.+|+|.++.
T Consensus       243 ~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~  321 (352)
T 3kc2_A          243 TLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSP-FHAVFMVGDNPASDIIGAQNYGWNSCLVKTGV  321 (352)
T ss_dssp             ECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTT-SSEEEEEESCTTTHHHHHHHHTCEEEECSSSS
T ss_pred             EecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCC-cceEEEEecCcHHHHHHHHHcCCEEEEEccCC
Confidence            46899999999987764                      22     4 79999999999 69999999999999999873


Q ss_pred             -CCCC--CCCCCCeEecCCCCC
Q 009774          508 -NGPL--PENHGFKTINSFAEI  526 (526)
Q Consensus       508 -~~~~--~~~~~~~~i~~l~eL  526 (526)
                       ....  ....++++++++.||
T Consensus       322 ~~~~~~~~~~~pd~vi~~l~el  343 (352)
T 3kc2_A          322 YNEGDDLKECKPTLIVNDVFDA  343 (352)
T ss_dssp             CCTTCCCTTCCCSEECSSHHHH
T ss_pred             CCcccccccCCCCEEECCHHHH
Confidence             3222  133458999998764

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.03  E-value=1.1e-09  Score=108.05  Aligned_cols=96  Identities=10%  Similarity=0.152  Sum_probs=67.8

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE------eCCcCCCCCHHHHHHHHHHcCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------DTAVGNKRETPSYVEITNSLGV  474 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~------~~~~~~KP~p~~~~~~~~~l~~  474 (526)
                      ..++++..++++.+....+++.+.++ .... ...++.+.  ...+.+..+.      +......+++..++.+++++|+
T Consensus       141 ~~~~~~~~~~~~~~~~~~~ki~~~~~-~~~~-~~~~~~l~--~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi  216 (290)
T 3dnp_A          141 VQFVESLSDLLMDEPVSAPVIEVYTE-HDIQ-HDITETIT--KAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGL  216 (290)
T ss_dssp             EEECSCHHHHHHHSCCCCSEEEEECC-GGGH-HHHHHHHH--HHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTC
T ss_pred             ccccCCHHHHHhcCCCCceEEEEeCC-HHHH-HHHHHHHH--hhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCC
Confidence            35678899999998888889865444 3322 22333210  1122233333      3345567789999999999999


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774          475 DKPSEILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       475 ~~p~~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                      + |++|++|||+.+|+..++.+|+.++
T Consensus       217 ~-~~~~i~~GD~~NDi~m~~~ag~~va  242 (290)
T 3dnp_A          217 S-MDDVVAIGHQYDDLPMIELAGLGVA  242 (290)
T ss_dssp             C-GGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             C-HHHEEEECCchhhHHHHHhcCCEEE
Confidence            7 9999999999999999999997444

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=99.03  E-value=1.2e-10  Score=113.12  Aligned_cols=83  Identities=11%  Similarity=0.078  Sum_probs=63.6

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchH----HHHHHHHhhcCCCCcccccc-eEE-eCCcCCCCCHHHHHHHHHHcCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSR----LAQRLIFGNSNYGDLRKYLS-GFF-DTAVGNKRETPSYVEITNSLGV  474 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~----~~~~~~l~~l~~~gl~~~fd-~i~-~~~~~~KP~p~~~~~~~~~l~~  474 (526)
                      .+++||+.++|+.|+++|++++++||.+.    ......|+.+   |+..+++ .++ ....   ++....+..+.+.|.
T Consensus       100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~l---Gi~~~~~~~Lilr~~~---~~K~~~r~~l~~~Gy  173 (262)
T 3ocu_A          100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRL---GFNGVEESAFYLKKDK---SAKAARFAEIEKQGY  173 (262)
T ss_dssp             CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHH---TCSCCSGGGEEEESSC---SCCHHHHHHHHHTTE
T ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHc---CcCcccccceeccCCC---CChHHHHHHHHhcCC
Confidence            46999999999999999999999999965    5777889999   9987773 333 3222   222344555555577


Q ss_pred             CCCCcEEEEecCHhhHHH
Q 009774          475 DKPSEILFVTDVYQEATA  492 (526)
Q Consensus       475 ~~p~~~l~VgDs~~Di~~  492 (526)
                      .   -+++|||+.+|+.+
T Consensus       174 ~---iv~~vGD~~~Dl~~  188 (262)
T 3ocu_A          174 E---IVLYVGDNLDDFGN  188 (262)
T ss_dssp             E---EEEEEESSGGGGCS
T ss_pred             C---EEEEECCChHHhcc
Confidence            6   59999999999998

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=99.01  E-value=2.2e-10  Score=110.99  Aligned_cols=83  Identities=12%  Similarity=0.113  Sum_probs=65.8

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchH----HHHHHHHhhcCCCCcccccc-eEE-eCCcCCCCCHHHHHHHHHHcCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSR----LAQRLIFGNSNYGDLRKYLS-GFF-DTAVGNKRETPSYVEITNSLGV  474 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~----~~~~~~l~~l~~~gl~~~fd-~i~-~~~~~~KP~p~~~~~~~~~l~~  474 (526)
                      .+++||+.++|+.|+++|++++++||.+.    +.....|+.+   |+..+++ .++ ...   +++....+..+.+.|.
T Consensus       100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~l---Gi~~~~~~~Lilr~~---~~~K~~~r~~L~~~gy  173 (260)
T 3pct_A          100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRL---GFTGVNDKTLLLKKD---KSNKSVRFKQVEDMGY  173 (260)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHH---TCCCCSTTTEEEESS---CSSSHHHHHHHHTTTC
T ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHc---CcCccccceeEecCC---CCChHHHHHHHHhcCC
Confidence            47999999999999999999999999965    4778889999   9987775 333 222   3444566666666677


Q ss_pred             CCCCcEEEEecCHhhHHH
Q 009774          475 DKPSEILFVTDVYQEATA  492 (526)
Q Consensus       475 ~~p~~~l~VgDs~~Di~~  492 (526)
                      .   -+++|||+..|+.+
T Consensus       174 ~---iv~~iGD~~~Dl~~  188 (260)
T 3pct_A          174 D---IVLFVGDNLNDFGD  188 (260)
T ss_dssp             E---EEEEEESSGGGGCG
T ss_pred             C---EEEEECCChHHcCc
Confidence            6   59999999999998

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=99.01  E-value=2.6e-09  Score=112.46  Aligned_cols=102  Identities=17%  Similarity=0.210  Sum_probs=84.2

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhc-CC----------CCcccccceEEeCCcCCCCCHHH-----
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS-NY----------GDLRKYLSGFFDTAVGNKRETPS-----  464 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l-~~----------~gl~~~fd~i~~~~~~~KP~p~~-----  464 (526)
                      +..-|++..+|++||+.| ++.++||++...+...++.+ +.          ..+.++||.++.  ...||..-.     
T Consensus       245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~--~A~KP~FF~~~~pf  321 (555)
T 2jc9_A          245 VVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILV--DARKPLFFGEGTVL  321 (555)
T ss_dssp             BCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEE--SCCTTGGGTTCCCE
T ss_pred             cCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEE--eCCCCCcccCCCcc
Confidence            456689999999999999 99999999999999998887 31          358899999662  223443221     


Q ss_pred             -----------------------------HHHHHHHcCCCCCCcEEEEecCH-hhHHHHH-HcCCcEEEEeCC
Q 009774          465 -----------------------------YVEITNSLGVDKPSEILFVTDVY-QEATAAK-AAGLEVVISIRP  506 (526)
Q Consensus       465 -----------------------------~~~~~~~l~~~~p~~~l~VgDs~-~Di~~A~-~aG~~~i~v~~~  506 (526)
                                                   +..+++.+|++ +++++||||+. .||..++ ..|+++++|...
T Consensus       322 r~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~-g~eVLYVGDhIftDIl~~kk~~GWrTiLViPE  393 (555)
T 2jc9_A          322 RQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAK-GKDILYIGDHIFGDILKSKKRQGWRTFLVIPE  393 (555)
T ss_dssp             EEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCC-GGGEEEEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred             eEeecCCCccccccccccccCCceeccCCHHHHHHHhCCC-CCeEEEECCEehHhHHhHHhhcCeEEEEEEec
Confidence                                         58899999997 99999999999 8999997 899999999864

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=99.00  E-value=5.6e-10  Score=109.63  Aligned_cols=42  Identities=24%  Similarity=0.373  Sum_probs=35.7

Q ss_pred             CCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 009774          458 NKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV  500 (526)
Q Consensus       458 ~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~  500 (526)
                      ...++..++.+++.+|++ |++|++|||+.+|+..++.+|+.+
T Consensus       195 ~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag~~v  236 (279)
T 3mpo_A          195 RASKGGTLSELVDQLGLT-ADDVMTLGDQGNDLTMIKYAGLGV  236 (279)
T ss_dssp             SCCHHHHHHHHHHHTTCC-GGGEEEC--CCTTHHHHHHSTEEC
T ss_pred             CCChHHHHHHHHHHcCCC-HHHEEEECCchhhHHHHHhcCcee
Confidence            344789999999999997 999999999999999999999543

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=98.98  E-value=1.1e-09  Score=106.83  Aligned_cols=66  Identities=9%  Similarity=0.088  Sum_probs=49.9

Q ss_pred             CcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCC
Q 009774          455 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA  524 (526)
Q Consensus       455 ~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~  524 (526)
                      ....++++..++++++++|++ |++|++|||+.+|+..++.+|+...   .+...+.....+++++.+..
T Consensus       195 ~~~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag~~va---m~na~~~~k~~A~~v~~~~~  260 (274)
T 3fzq_A          195 IQKDFHKGKAIKRLQERLGVT-QKETICFGDGQNDIVMFQASDVTIA---MKNSHQQLKDIATSICEDIF  260 (274)
T ss_dssp             EETTCSHHHHHHHHHHHHTCC-STTEEEECCSGGGHHHHHTCSEEEE---ETTSCHHHHHHCSEEECCGG
T ss_pred             eeCCCCHHHHHHHHHHHcCCC-HHHEEEECCChhHHHHHHhcCceEE---ecCccHHHHHhhhheeCCCc
Confidence            456788899999999999997 9999999999999999999995433   33222222233467766654

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=98.97  E-value=7.7e-11  Score=114.97  Aligned_cols=67  Identities=12%  Similarity=0.086  Sum_probs=50.5

Q ss_pred             CcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCC
Q 009774          455 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE  525 (526)
Q Consensus       455 ~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e  525 (526)
                      ....+|++..++.+++++|++ |++|++|||+.+|+.+++.+|+.+++   +...+.....+++++++..|
T Consensus       182 ~~~~~~K~~~~~~~~~~~~~~-~~~~~~iGD~~nD~~~~~~ag~~v~~---~n~~~~~~~~a~~v~~~~~~  248 (261)
T 2rbk_A          182 TAKGDTKQKGIDEIIRHFGIK-LEETMSFGDGGNDISMLRHAAIGVAM---GQAKEDVKAAADYVTAPIDE  248 (261)
T ss_dssp             ESTTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHHSSEECCCGGG
T ss_pred             cCCCCChHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCceEEe---cCccHHHHhhCCEEeccCch
Confidence            346789999999999999997 99999999999999999999985443   32221222234677776654

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=98.97  E-value=8.4e-10  Score=105.63  Aligned_cols=42  Identities=10%  Similarity=0.114  Sum_probs=38.1

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCc
Q 009774          457 GNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLE  499 (526)
Q Consensus       457 ~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~  499 (526)
                      ...+++...+.++++++++ ++++++|||+.+|+.+++.+|+.
T Consensus       150 ~~~~K~~~l~~l~~~~~~~-~~~~~~iGD~~nD~~m~~~ag~~  191 (227)
T 1l6r_A          150 RGEDKAFAVNKLKEMYSLE-YDEILVIGDSNNDMPMFQLPVRK  191 (227)
T ss_dssp             TTCSHHHHHHHHHHHTTCC-GGGEEEECCSGGGHHHHTSSSEE
T ss_pred             CCCCHHHHHHHHHHHhCcC-HHHEEEECCcHHhHHHHHHcCce
Confidence            3467788899999999997 99999999999999999999985

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=98.94  E-value=6.9e-10  Score=110.81  Aligned_cols=66  Identities=6%  Similarity=-0.071  Sum_probs=47.9

Q ss_pred             CcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCC
Q 009774          455 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA  524 (526)
Q Consensus       455 ~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~  524 (526)
                      .....+++...+.+++++|++ |++|++|||+.+|+..++.+|+..+   .+...+.....+++++.+..
T Consensus       223 ~~~~~~K~~al~~l~~~lgi~-~~e~i~~GDs~NDi~m~~~ag~~va---m~na~~~~k~~Ad~v~~~~~  288 (304)
T 3l7y_A          223 ITKGLHKGWALQQLLKRWNFT-SDHLMAFGDGGNDIEMLKLAKYSYA---MANAPKNVKAAANYQAKSND  288 (304)
T ss_dssp             EETTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHCTEEEE---CTTSCHHHHHHCSEECCCGG
T ss_pred             EcCCCCHHHHHHHHHHHhCcC-HHHEEEECCCHHHHHHHHhcCCeEE---cCCcCHHHHHhccEEcCCCC
Confidence            344566788999999999997 9999999999999999999995433   33222222233366665543

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=98.92  E-value=3e-09  Score=104.96  Aligned_cols=83  Identities=11%  Similarity=0.105  Sum_probs=57.7

Q ss_pred             HHH-HCCCeEEEE--eCchHHHHHHHHhhcCCCCcccccceEE------eCCcCCCCCHHHHHHHHHHcCCCCCCcEEEE
Q 009774          413 KWH-SLGTKVYIY--SSGSRLAQRLIFGNSNYGDLRKYLSGFF------DTAVGNKRETPSYVEITNSLGVDKPSEILFV  483 (526)
Q Consensus       413 ~L~-~~G~~l~vv--Tn~~~~~~~~~l~~l~~~gl~~~fd~i~------~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~V  483 (526)
                      .+. +..+++.++  ++......+.+.+.+   +  +.|..+.      +......+++...+.+++.+|++ ++++++|
T Consensus       160 ~l~~~~~~ki~i~~~~~~~~~~~~~l~~~~---~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~-~~e~ia~  233 (283)
T 3dao_A          160 RLDRNDIIKFTVFHPDKCEELCTPVFIPAW---N--KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLL-PDEVCCF  233 (283)
T ss_dssp             GCCCSCCCEEEEECSSCHHHHHTTTHHHHH---T--TTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCC-GGGEEEE
T ss_pred             HcCccCceEEEEEcChHHHHHHHHHHHHHh---c--CCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCC-HHHEEEE
Confidence            344 668899998  333333333344444   2  2233333      22345566889999999999997 9999999


Q ss_pred             ecCHhhHHHHHHcCCcEE
Q 009774          484 TDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       484 gDs~~Di~~A~~aG~~~i  501 (526)
                      ||+.+|+..++.+|+..+
T Consensus       234 GD~~NDi~ml~~ag~~va  251 (283)
T 3dao_A          234 GDNLNDIEMLQNAGISYA  251 (283)
T ss_dssp             ECSGGGHHHHHHSSEEEE
T ss_pred             CCCHHHHHHHHhCCCEEE
Confidence            999999999999995443

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=98.91  E-value=8e-11  Score=109.99  Aligned_cols=93  Identities=14%  Similarity=0.107  Sum_probs=83.9

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      +.++||+.++|++|++. |+++|+||+++..++.+++.+   ++..+|+.++  +++...|   +.|.+.++++|.+ ++
T Consensus        67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~l---d~~~~f~~~l~rd~~~~~k---~~~lK~L~~Lg~~-~~  138 (195)
T 2hhl_A           67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLL---DRWGVFRARLFRESCVFHR---GNYVKDLSRLGRE-LS  138 (195)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHH---CCSSCEEEEECGGGCEEET---TEEECCGGGSSSC-GG
T ss_pred             EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHh---CCcccEEEEEEcccceecC---CceeeeHhHhCCC-hh
Confidence            46899999999999998 999999999999999999999   8888999888  4454445   5689999999997 99


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEE
Q 009774          479 EILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                      +|++|||++.++.++.++|+.++
T Consensus       139 ~~vivDDs~~~~~~~~~ngi~i~  161 (195)
T 2hhl_A          139 KVIIVDNSPASYIFHPENAVPVQ  161 (195)
T ss_dssp             GEEEEESCGGGGTTCGGGEEECC
T ss_pred             HEEEEECCHHHhhhCccCccEEe
Confidence            99999999999999999999764

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=98.90  E-value=4.5e-09  Score=102.44  Aligned_cols=68  Identities=18%  Similarity=0.133  Sum_probs=49.7

Q ss_pred             eCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCC
Q 009774          453 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA  524 (526)
Q Consensus       453 ~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~  524 (526)
                      +......+++...+.+++++|++ +++|++|||+.+|+..++.+|+..+   -+...+.....++++..+..
T Consensus       187 ei~~~~~~K~~~l~~l~~~lgi~-~~~~ia~GD~~NDi~m~~~ag~~va---m~na~~~~k~~Ad~v~~~~~  254 (268)
T 3r4c_A          187 DVNVAGTSKATGLSLFADYYRVK-VSEIMACGDGGNDIPMLKAAGIGVA---MGNASEKVQSVADFVTDTVD  254 (268)
T ss_dssp             EEEETTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEE---CTTSCHHHHHTCSEECCCTT
T ss_pred             EEeeCCCCHHHHHHHHHHHcCCC-HHHEEEECCcHHhHHHHHhCCCeEE---eCCCcHHHHHhcCEeeCCCC
Confidence            33455667789999999999997 9999999999999999999996533   33222222233466666544

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=98.84  E-value=2.1e-09  Score=105.40  Aligned_cols=82  Identities=11%  Similarity=0.131  Sum_probs=61.6

Q ss_pred             HHHHCCCeEEEEeCchHHHHHHHHhhcCCCC--cccccceEE------eCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 009774          413 KWHSLGTKVYIYSSGSRLAQRLIFGNSNYGD--LRKYLSGFF------DTAVGNKRETPSYVEITNSLGVDKPSEILFVT  484 (526)
Q Consensus       413 ~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~g--l~~~fd~i~------~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~Vg  484 (526)
                      .+++.++++.++|+...  ....++.+   +  +.+.|+.+.      +.....++++..++.+++.+|++ +++|++||
T Consensus       141 ~~~~~~~ki~i~~~~~~--~~~~~~~l---~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~-~~~~~~~G  214 (271)
T 1rlm_A          141 EIDDVLFKFSLNLPDEQ--IPLVIDKL---HVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLS-PQNVVAIG  214 (271)
T ss_dssp             GCCSCEEEEEEECCGGG--HHHHHHHH---HHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCC-GGGEEEEE
T ss_pred             hCCCceEEEEEEcCHHH--HHHHHHHH---HHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCC-HHHEEEEC
Confidence            34567889999988754  33334433   2  334455444      22456789999999999999997 99999999


Q ss_pred             cCHhhHHHHHHcCCcE
Q 009774          485 DVYQEATAAKAAGLEV  500 (526)
Q Consensus       485 Ds~~Di~~A~~aG~~~  500 (526)
                      |+.+|+.+++.+|+..
T Consensus       215 D~~nD~~m~~~ag~~v  230 (271)
T 1rlm_A          215 DSGNDAEMLKMARYSF  230 (271)
T ss_dssp             CSGGGHHHHHHCSEEE
T ss_pred             CcHHHHHHHHHcCCeE
Confidence            9999999999999853

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=98.83  E-value=3.3e-10  Score=104.64  Aligned_cols=92  Identities=14%  Similarity=0.105  Sum_probs=82.3

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      +.++||+.++|++|++. |+++|+||++..+++.+++.+   +...+|+.++  +++...|   ..|.+.++++|.+ ++
T Consensus        54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~l---d~~~~f~~~~~rd~~~~~k---~~~~k~L~~Lg~~-~~  125 (181)
T 2ght_A           54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLL---DKWGAFRARLFRESCVFHR---GNYVKDLSRLGRD-LR  125 (181)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHH---CTTCCEEEEECGGGSEEET---TEEECCGGGTCSC-GG
T ss_pred             EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHH---CCCCcEEEEEeccCceecC---CcEeccHHHhCCC-cc
Confidence            46899999999999998 999999999999999999999   8888999888  4444333   5689999999997 99


Q ss_pred             cEEEEecCHhhHHHHHHcCCcE
Q 009774          479 EILFVTDVYQEATAAKAAGLEV  500 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~  500 (526)
                      +|++|||++.++.++.++|+..
T Consensus       126 ~~vivdDs~~~~~~~~~ngi~i  147 (181)
T 2ght_A          126 RVLILDNSPASYVFHPDNAVPV  147 (181)
T ss_dssp             GEEEECSCGGGGTTCTTSBCCC
T ss_pred             eEEEEeCCHHHhccCcCCEeEe
Confidence            9999999999999999999984

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=98.81  E-value=7.6e-09  Score=100.37  Aligned_cols=61  Identities=10%  Similarity=0.085  Sum_probs=45.4

Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCC
Q 009774          460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA  524 (526)
Q Consensus       460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~  524 (526)
                      .+...++.+++.+|++ +++|++|||+.+|+..++.+|+.++.   +...+.....++++..+..
T Consensus       183 ~K~~~l~~l~~~lgi~-~~~~ia~GDs~NDi~ml~~ag~~vam---~na~~~~k~~A~~v~~~~~  243 (258)
T 2pq0_A          183 SKAEGIRMMIEKLGID-KKDVYAFGDGLNDIEMLSFVGTGVAM---GNAHEEVKRVADFVTKPVD  243 (258)
T ss_dssp             CHHHHHHHHHHHHTCC-GGGEEEECCSGGGHHHHHHSSEEEEE---TTCCHHHHHTCSEEECCGG
T ss_pred             ChHHHHHHHHHHhCCC-HHHEEEECCcHHhHHHHHhCCcEEEe---CCCcHHHHHhCCEEeCCCC
Confidence            3456789999999997 99999999999999999999996553   2222222233467766654

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=98.76  E-value=1.4e-08  Score=102.73  Aligned_cols=112  Identities=16%  Similarity=0.084  Sum_probs=70.4

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc-ceEEe------------------CCcCCCCC-
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFFD------------------TAVGNKRE-  461 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f-d~i~~------------------~~~~~KP~-  461 (526)
                      .++|++.++|+.|++ |++++++|+..........+.+   ++.+.+ .....                  .....+++ 
T Consensus       103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~  178 (332)
T 1y8a_A          103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMI---GVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGE  178 (332)
T ss_dssp             CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHT---TCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred             CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhh---hhhhhhcccccchhhhccccccceeEEecCHHHHhhhhH
Confidence            578999999999999 9999999999877766666666   442222 11000                  00001221 


Q ss_pred             --------------HHHHH----------HHHHHcCCCCCCc----EEEEecCHhhHHHHHHc----CCcEEEEeCCCCC
Q 009774          462 --------------TPSYV----------EITNSLGVDKPSE----ILFVTDVYQEATAAKAA----GLEVVISIRPGNG  509 (526)
Q Consensus       462 --------------p~~~~----------~~~~~l~~~~p~~----~l~VgDs~~Di~~A~~a----G~~~i~v~~~~~~  509 (526)
                                    |..|.          +.....+++ +++    |++|||+.+|+.+++.+    |+..+ + +.  .
T Consensus       179 ~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~-~~~~~~~via~GDs~NDi~ml~~A~~~~g~~va-m-na--~  253 (332)
T 1y8a_A          179 ELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYC-ESKGIDFPVVVGDSISDYKMFEAARGLGGVAIA-F-NG--N  253 (332)
T ss_dssp             HHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHH-HHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEE-E-SC--C
T ss_pred             HHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccC-hhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEE-e-cC--C
Confidence                          23343          211112776 889    99999999999999999    99754 4 32  1


Q ss_pred             CCCCCCCCeEecC
Q 009774          510 PLPENHGFKTINS  522 (526)
Q Consensus       510 ~~~~~~~~~~i~~  522 (526)
                      +.....+++++.+
T Consensus       254 ~~lk~~Ad~v~~~  266 (332)
T 1y8a_A          254 EYALKHADVVIIS  266 (332)
T ss_dssp             HHHHTTCSEEEEC
T ss_pred             HHHHhhCcEEecC
Confidence            1122234666655

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=98.71  E-value=3.4e-08  Score=97.39  Aligned_cols=86  Identities=13%  Similarity=0.114  Sum_probs=57.1

Q ss_pred             HHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE------eCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecC
Q 009774          413 KWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDV  486 (526)
Q Consensus       413 ~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~------~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs  486 (526)
                      .+...++...++++.+......+.+.+.. .+.+.+..++      +......+++...+++++.+|++ ++++++|||+
T Consensus       157 ~~~~~~i~ki~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~-~~~~ia~GD~  234 (285)
T 3pgv_A          157 ELDPQGISKVFFTCEDHEHLLPLEQAMNA-RWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYT-LSDCIAFGDG  234 (285)
T ss_dssp             CSCCSSEEEEEEECSCHHHHHHHHHHHHH-HHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCC-GGGEEEEECS
T ss_pred             HcCCCCceEEEEeCCCHHHHHHHHHHHHH-HhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCC-HHHEEEECCc
Confidence            34455666677776554444433333200 0112233332      33345566789999999999997 9999999999


Q ss_pred             HhhHHHHHHcCCcE
Q 009774          487 YQEATAAKAAGLEV  500 (526)
Q Consensus       487 ~~Di~~A~~aG~~~  500 (526)
                      .+|+..++.+|+.+
T Consensus       235 ~NDi~ml~~ag~~v  248 (285)
T 3pgv_A          235 MNDAEMLSMAGKGC  248 (285)
T ss_dssp             GGGHHHHHHSSEEE
T ss_pred             HhhHHHHHhcCCEE
Confidence            99999999999543

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=98.59  E-value=3.7e-08  Score=97.34  Aligned_cols=60  Identities=13%  Similarity=0.021  Sum_probs=44.7

Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCC
Q 009774          460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSF  523 (526)
Q Consensus       460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l  523 (526)
                      .+...++.+++.+|++ +++|++|||+.+|+.+++.+|+ ++.+.++.  +.....+++++.+.
T Consensus       216 ~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~m~~~ag~-~va~~~~~--~~~~~~a~~v~~~~  275 (288)
T 1nrw_A          216 SKGQALKRLAKQLNIP-LEETAAVGDSLNDKSMLEAAGK-GVAMGNAR--EDIKSIADAVTLTN  275 (288)
T ss_dssp             SHHHHHHHHHHHTTCC-GGGEEEEESSGGGHHHHHHSSE-EEECTTCC--HHHHHHCSEECCCG
T ss_pred             ChHHHHHHHHHHhCCC-HHHEEEEcCCHHHHHHHHHcCc-EEEEcCCC--HHHHhhCceeecCC
Confidence            4567799999999997 9999999999999999999999 56664321  11112235666554

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=98.40  E-value=1.4e-07  Score=92.97  Aligned_cols=46  Identities=20%  Similarity=0.291  Sum_probs=39.5

Q ss_pred             cCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEE
Q 009774          456 VGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVIS  503 (526)
Q Consensus       456 ~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v  503 (526)
                      ...-+++..+..+++.+|++ +++|++|||+.+|+..++.+|+ ++.+
T Consensus       194 ~~~~~K~~~l~~l~~~~~~~-~~~~~~~GD~~nD~~m~~~ag~-~va~  239 (282)
T 1rkq_A          194 DKRVNKGTGVKSLADVLGIK-PEEIMAIGDQENDIAMIEYAGV-GVAV  239 (282)
T ss_dssp             ETTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSE-EEEC
T ss_pred             CCCCCCHHHHHHHHHHhCCC-HHHEEEECCcHHHHHHHHHCCc-EEEe
Confidence            33456778899999999997 9999999999999999999998 4443

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=98.39  E-value=1.2e-05  Score=83.77  Aligned_cols=102  Identities=18%  Similarity=0.236  Sum_probs=80.2

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcC------CCCcccccceEEeCCcCCCC---------------
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN------YGDLRKYLSGFFDTAVGNKR---------------  460 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~------~~gl~~~fd~i~~~~~~~KP---------------  460 (526)
                      ..-|.+..+|++||+.|.++.++||++-.+....++.+-      ...+.++||.|+..  ..||               
T Consensus       186 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~--A~KP~FF~~~~~~~~v~~~  263 (470)
T 4g63_A          186 IREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITL--ANKPRFFYDNLRFLSVNPE  263 (470)
T ss_dssp             ECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEES--CCTTHHHHSCCCEEEECTT
T ss_pred             hCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEEC--CCCCCcccCCCcceEEECC
Confidence            345889999999999999999999999999998888763      34789999998721  1111               


Q ss_pred             -----------C-----HHHHHHHHHHcCCCCCCcEEEEecCH-hhHHHHHH-cCCcEEEEeCC
Q 009774          461 -----------E-----TPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKA-AGLEVVISIRP  506 (526)
Q Consensus       461 -----------~-----p~~~~~~~~~l~~~~p~~~l~VgDs~-~Di~~A~~-aG~~~i~v~~~  506 (526)
                                 .     -.-...+++.+|.. ..+|+||||+. .||..++. .|++|+.|...
T Consensus       264 ~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~-g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E  326 (470)
T 4g63_A          264 NGTMTNVHGPIVPGVYQGGNAKKFTEDLGVG-GDEILYIGDHIYGDILRLKKDCNWRTALVVEE  326 (470)
T ss_dssp             TCCEEECCSSCCSEEEEECCHHHHHHHTTCC-GGGEEEEESCCCSCHHHHHHSCCCEEEEECTT
T ss_pred             CCcccccccccCCceeecCcHHHHHHHhCCC-CCeEEEECCchHHHHHhhhhccCCeEEEEhHH
Confidence                       0     11234567788997 99999999999 89887775 59999999865

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=98.37  E-value=1.1e-07  Score=92.34  Aligned_cols=45  Identities=13%  Similarity=0.051  Sum_probs=40.1

Q ss_pred             CcCCCCCHHHHHHHHHHcCCCCC--CcEEEEecCHhhHHHHHHcCCcEE
Q 009774          455 AVGNKRETPSYVEITNSLGVDKP--SEILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       455 ~~~~KP~p~~~~~~~~~l~~~~p--~~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                      ... ++++...+++++++|++ +  ++|++|||+.+|+..++.+|+..+
T Consensus       172 ~~~-~~K~~~l~~l~~~~~i~-~~~~~~~~~GD~~nD~~m~~~ag~~va  218 (259)
T 3zx4_A          172 AKG-ADKGRAVARLRALWPDP-EEARFAVGLGDSLNDLPLFRAVDLAVY  218 (259)
T ss_dssp             ESS-CCHHHHHHHHHHTCSSH-HHHTSEEEEESSGGGHHHHHTSSEEEE
T ss_pred             cCC-CCHHHHHHHHHHHhCCC-CCCceEEEEeCCHHHHHHHHhCCCeEE
Confidence            344 78899999999999997 8  999999999999999999997543

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=98.32  E-value=7.1e-06  Score=81.26  Aligned_cols=94  Identities=17%  Similarity=0.118  Sum_probs=65.8

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE------eC------------CcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------DT------------AVGNKRE  461 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~------~~------------~~~~KP~  461 (526)
                      ..++.||+.++++.|+++|++++++|++.....+.+++.+   |+...-..++      ++            ....|+.
T Consensus       139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~---g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~  215 (297)
T 4fe3_A          139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQA---GVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHD  215 (297)
T ss_dssp             CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHT---TCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHH
T ss_pred             CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHc---CCCcccceEEeeeEEEcccceeEeccccccchhhccc
Confidence            4579999999999999999999999999999999999999   7654332333      11            0112332


Q ss_pred             HHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcC
Q 009774          462 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAG  497 (526)
Q Consensus       462 p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG  497 (526)
                      |..=......+.-. .++++||||+.+|+.+++.+.
T Consensus       216 ~~~k~~~~~~~~~~-~~~v~~vGDGiNDa~m~k~l~  250 (297)
T 4fe3_A          216 GALKNTDYFSQLKD-NSNIILLGDSQGDLRMADGVA  250 (297)
T ss_dssp             HHHTCHHHHHHTTT-CCEEEEEESSGGGGGTTTTCS
T ss_pred             HHHHHHHHHHhhcc-CCEEEEEeCcHHHHHHHhCcc
Confidence            22111122233333 678999999999999877544

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=98.31  E-value=1.1e-06  Score=85.70  Aligned_cols=45  Identities=18%  Similarity=0.158  Sum_probs=39.5

Q ss_pred             CcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 009774          455 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV  500 (526)
Q Consensus       455 ~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~  500 (526)
                      .....+++..+..+++.+|++ |++|++|||+.+|+.+++.+|+..
T Consensus       185 ~~~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~~~~~ag~~v  229 (268)
T 1nf2_A          185 VPKNVDKGKALRFLRERMNWK-KEEIVVFGDNENDLFMFEEAGLRV  229 (268)
T ss_dssp             ECTTCCHHHHHHHHHHHHTCC-GGGEEEEECSHHHHHHHTTCSEEE
T ss_pred             eCCCCChHHHHHHHHHHcCCC-HHHeEEEcCchhhHHHHHHcCCEE
Confidence            344556788999999999997 999999999999999999999843

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=98.13  E-value=2.1e-05  Score=80.84  Aligned_cols=99  Identities=12%  Similarity=0.105  Sum_probs=66.4

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc--ceEE------e-C------C------cCCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--SGFF------D-T------A------VGNKR  460 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f--d~i~------~-~------~------~~~KP  460 (526)
                      +++|++.++++.|+++|++++|||.+..+.++.+.+.+   |+..-+  +.++      + +      .      ....-
T Consensus       221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~l---g~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~g  297 (385)
T 4gxt_A          221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDT---NNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREG  297 (385)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCT---TSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHH
T ss_pred             eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHh---CcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCc
Confidence            47999999999999999999999999999999999988   542111  1111      0 0      0      01111


Q ss_pred             CHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcC-Cc-EEEEeC
Q 009774          461 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAG-LE-VVISIR  505 (526)
Q Consensus       461 ~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG-~~-~i~v~~  505 (526)
                      ++...+..++. ... ...++++|||.+|+..-.+.+ .. .+.+++
T Consensus       298 K~~~i~~~~~~-~~~-~~~i~a~GDs~~D~~ML~~~~~~~~~liinr  342 (385)
T 4gxt_A          298 KVQTINKLIKN-DRN-YGPIMVGGDSDGDFAMLKEFDHTDLSLIIHR  342 (385)
T ss_dssp             HHHHHHHHTCC-TTE-ECCSEEEECSGGGHHHHHHCTTCSEEEEECC
T ss_pred             hHHHHHHHHHh-cCC-CCcEEEEECCHhHHHHHhcCccCceEEEEcC
Confidence            34444444322 233 457999999999999998754 33 344554

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=98.02  E-value=6.4e-06  Score=81.88  Aligned_cols=42  Identities=7%  Similarity=0.061  Sum_probs=38.0

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCc
Q 009774          457 GNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLE  499 (526)
Q Consensus       457 ~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~  499 (526)
                      ..-+++..+..+++.+|++ +++|++|||+.+|+..++.+|+.
T Consensus       221 ~~~~K~~~l~~l~~~~~~~-~~~~~~~GD~~nD~~m~~~ag~~  262 (301)
T 2b30_A          221 LGHDKYTGINYLLKHYNIS-NDQVLVVGDAENDIAMLSNFKYS  262 (301)
T ss_dssp             TTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHSCSEE
T ss_pred             CCCCcHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCCe
Confidence            3456788999999999997 99999999999999999999984

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=97.88  E-value=1e-05  Score=82.42  Aligned_cols=78  Identities=14%  Similarity=0.085  Sum_probs=62.8

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccc-ccc-eEE--eCCcCCCCCHHHHHHHHHHc-CC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLS-GFF--DTAVGNKRETPSYVEITNSL-GV  474 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~-~fd-~i~--~~~~~~KP~p~~~~~~~~~l-~~  474 (526)
                      .+.+.||+.++|+.+. ++|.++|.|++...++..+++.+   +... +|+ .++  +.++.      .|.+-++++ |.
T Consensus        73 ~v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl~~L---Dp~~~~f~~ri~sr~~~g~------~~~KdL~~L~~~  142 (372)
T 3ef0_A           73 YIKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKII---DPTGKLFQDRVLSRDDSGS------LAQKSLRRLFPC  142 (372)
T ss_dssp             EEEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHH---CTTSCSSSSCEECTTTSSC------SSCCCGGGTCSS
T ss_pred             EEEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHHHHh---ccCCceeeeEEEEecCCCC------cceecHHHhcCC
Confidence            4578999999999999 57999999999999999999999   6666 787 455  22321      345556666 89


Q ss_pred             CCCCcEEEEecCHh
Q 009774          475 DKPSEILFVTDVYQ  488 (526)
Q Consensus       475 ~~p~~~l~VgDs~~  488 (526)
                      + +++|++|+|++.
T Consensus       143 d-l~~viiiDd~~~  155 (372)
T 3ef0_A          143 D-TSMVVVIDDRGD  155 (372)
T ss_dssp             C-CTTEEEEESCSG
T ss_pred             C-CceEEEEeCCHH
Confidence            7 999999999984

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=97.79  E-value=5e-05  Score=83.45  Aligned_cols=102  Identities=17%  Similarity=0.175  Sum_probs=74.1

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEE
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL  481 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l  481 (526)
                      ++.|++.+++++|+++|+++.++|+.+....+.+.+.+   |+..+|..+.     .+.+    ..+++++.- . ++++
T Consensus       457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~l---gi~~~~~~~~-----P~~K----~~~v~~l~~-~-~~v~  522 (645)
T 3j08_A          457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL---NLDLVIAEVL-----PHQK----SEEVKKLQA-K-EVVA  522 (645)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH---TCSEEECSCC-----TTCH----HHHHHHHTT-T-CCEE
T ss_pred             CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc---CCCEEEEeCC-----HHhH----HHHHHHHhh-C-CeEE
Confidence            68899999999999999999999999999999999999   8764433221     1222    334455544 2 6999


Q ss_pred             EEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEe
Q 009774          482 FVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTI  520 (526)
Q Consensus       482 ~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i  520 (526)
                      ||||+.+|+.+.+.+|+   .+..+...+.....+|.++
T Consensus       523 ~vGDg~ND~~al~~A~v---giamg~g~~~a~~~AD~vl  558 (645)
T 3j08_A          523 FVGDGINDAPALAQADL---GIAVGSGSDVAVESGDIVL  558 (645)
T ss_dssp             EEECSSSCHHHHHHSSE---EEEECCCSCCSSCCSSSEE
T ss_pred             EEeCCHhHHHHHHhCCE---EEEeCCCcHHHHHhCCEEE
Confidence            99999999999999994   3333322222233447776

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=97.66  E-value=5.9e-05  Score=66.09  Aligned_cols=37  Identities=8%  Similarity=-0.053  Sum_probs=28.6

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchHH---HHHHHHhhc
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIFGNS  439 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~---~~~~~l~~l  439 (526)
                      +.|++.++|++|+++|++++++|+.+..   .....++.+
T Consensus        25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~   64 (142)
T 2obb_A           25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRAR   64 (142)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTT
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHc
Confidence            4478999999999999999999998743   334445555

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=97.58  E-value=0.00027  Score=67.91  Aligned_cols=45  Identities=13%  Similarity=0.011  Sum_probs=38.5

Q ss_pred             CCCCHHHHHHHHHHcCC-CCCCcEEEEecCHhhHHHHHHcCCcEEEEe
Q 009774          458 NKRETPSYVEITNSLGV-DKPSEILFVTDVYQEATAAKAAGLEVVISI  504 (526)
Q Consensus       458 ~KP~p~~~~~~~~~l~~-~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~  504 (526)
                      .-.+......+++.+++ + ++++++|||+.+|+...+.+|+. |.+.
T Consensus       177 g~sKg~al~~l~~~~~~~~-~~~viafGD~~NDi~Ml~~ag~~-va~g  222 (249)
T 2zos_A          177 NSDKGKAAKILLDFYKRLG-QIESYAVGDSYNDFPMFEVVDKV-FIVG  222 (249)
T ss_dssp             SCCHHHHHHHHHHHHHTTS-CEEEEEEECSGGGHHHHTTSSEE-EEES
T ss_pred             CCChHHHHHHHHHHhccCC-CceEEEECCCcccHHHHHhCCcE-EEeC
Confidence            44556789999999998 8 99999999999999999999985 4443

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=97.47  E-value=0.00033  Score=77.93  Aligned_cols=102  Identities=16%  Similarity=0.149  Sum_probs=73.9

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEE
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL  481 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l  481 (526)
                      ++.|++.+.++.|+++|+++.++|+.+....+.+.+.+   |+...|..+   ..  +.+    ..+++.+.-  .++++
T Consensus       535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~l---gi~~~~~~~---~P--~~K----~~~v~~l~~--~~~v~  600 (723)
T 3j09_A          535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL---NLDLVIAEV---LP--HQK----SEEVKKLQA--KEVVA  600 (723)
T ss_dssp             CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH---TCSEEECSC---CT--TCH----HHHHHHHTT--TCCEE
T ss_pred             CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc---CCcEEEccC---CH--HHH----HHHHHHHhc--CCeEE
Confidence            68899999999999999999999999999999999999   875433222   11  112    334445544  26899


Q ss_pred             EEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEe
Q 009774          482 FVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTI  520 (526)
Q Consensus       482 ~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i  520 (526)
                      ||||+.+|+.+.+.||+   .+.-+...+.....+|.++
T Consensus       601 ~vGDg~ND~~al~~A~v---giamg~g~~~a~~~AD~vl  636 (723)
T 3j09_A          601 FVGDGINDAPALAQADL---GIAVGSGSDVAVESGDIVL  636 (723)
T ss_dssp             EEECSSTTHHHHHHSSE---EEECCCCSCCSSCCSSEEC
T ss_pred             EEECChhhHHHHhhCCE---EEEeCCCcHHHHHhCCEEE
Confidence            99999999999999994   4444322222333447777

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=97.34  E-value=3.2e-05  Score=72.13  Aligned_cols=91  Identities=11%  Similarity=0.028  Sum_probs=73.0

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcc-cccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~-~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      ...||+.++|+.+. ++|.++|.|++...+++.+++.+   +.. .+|+..+  +.+...   +..|.+.++.+|.+ ++
T Consensus        59 ~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~L---Dp~~~~f~~rl~R~~c~~~---~g~y~KdL~~Lgrd-l~  130 (204)
T 3qle_A           59 AKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKL---DPIHAFVSYNLFKEHCVYK---DGVHIKDLSKLNRD-LS  130 (204)
T ss_dssp             EECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHT---STTCSSEEEEECGGGSEEE---TTEEECCGGGSCSC-GG
T ss_pred             EeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHh---CCCCCeEEEEEEecceeEE---CCeeeecHHHhCCC-hH
Confidence            57899999999999 57999999999999999999999   665 5788766  333221   23377888999997 99


Q ss_pred             cEEEEecCHhhHHHHHHcCCcE
Q 009774          479 EILFVTDVYQEATAAKAAGLEV  500 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~  500 (526)
                      +|++|+|++.........|+..
T Consensus       131 ~vIiIDDsp~~~~~~p~N~I~I  152 (204)
T 3qle_A          131 KVIIIDTDPNSYKLQPENAIPM  152 (204)
T ss_dssp             GEEEEESCTTTTTTCGGGEEEC
T ss_pred             HEEEEECCHHHHhhCccCceEe
Confidence            9999999998776555665544

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=97.27  E-value=0.00045  Score=67.36  Aligned_cols=44  Identities=14%  Similarity=0.007  Sum_probs=35.3

Q ss_pred             CHHHHHHHHHHcC-CCCCCc--EEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          461 ETPSYVEITNSLG-VDKPSE--ILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       461 ~p~~~~~~~~~l~-~~~p~~--~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      +......+++.+| ++ +++  +++|||+.+|+...+.+|+. |.+.++
T Consensus       190 K~~~l~~l~~~~~~~~-~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~  236 (275)
T 1xvi_A          190 KDQAANWIIATYQQLS-GKRPTTLGLGDGPNDAPLLEVMDYA-VIVKGL  236 (275)
T ss_dssp             HHHHHHHHHHHHHHHH-SSCCEEEEEESSGGGHHHHHTSSEE-EECCCC
T ss_pred             HHHHHHHHHHHhhhcc-cccCcEEEECCChhhHHHHHhCCce-EEecCC
Confidence            4555666777888 86 889  99999999999999999984 666554

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=97.16  E-value=0.00032  Score=60.11  Aligned_cols=27  Identities=30%  Similarity=0.375  Sum_probs=23.2

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchH
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSR  429 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~  429 (526)
                      +.|++.++|++|+++|++++++|+.+.
T Consensus        25 ~~~~~~~~l~~l~~~Gi~~~iaTGR~~   51 (126)
T 1xpj_A           25 PRLDVIEQLREYHQLGFEIVISTARNM   51 (126)
T ss_dssp             BCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred             CCHHHHHHHHHHHhCCCeEEEEeCCCh
Confidence            456777899999999999999999875

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=97.15  E-value=9.5e-05  Score=73.81  Aligned_cols=93  Identities=13%  Similarity=0.078  Sum_probs=68.0

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc--ce-EE-eCCc----CCCCCHHHHHHHHHHc--
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--SG-FF-DTAV----GNKRETPSYVEITNSL--  472 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f--d~-i~-~~~~----~~KP~p~~~~~~~~~l--  472 (526)
                      ..||+.++|+.+.+ .|.++|.|++...++..+++.+   +....+  .. ++ +.+.    ..+.....|.+-++.+  
T Consensus       165 ~RP~l~eFL~~l~~-~yeivIfTas~~~ya~~vld~L---d~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~  240 (320)
T 3shq_A          165 MRPYLHEFLTSAYE-DYDIVIWSATSMRWIEEKMRLL---GVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWA  240 (320)
T ss_dssp             BCTTHHHHHHHHHH-HEEEEEECSSCHHHHHHHHHHT---TCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHH
T ss_pred             eCCCHHHHHHHHHh-CCEEEEEcCCcHHHHHHHHHHh---CCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhc
Confidence            56999999999996 5999999999999999999999   555443  22 22 3221    1122233466667777  


Q ss_pred             ---CCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 009774          473 ---GVDKPSEILFVTDVYQEATAAKAAGLEV  500 (526)
Q Consensus       473 ---~~~~p~~~l~VgDs~~Di~~A~~aG~~~  500 (526)
                         |.+ ++++++|+|++.-.......|+..
T Consensus       241 ~~p~rd-l~~tIiIDdsp~~~~~~p~NgI~I  270 (320)
T 3shq_A          241 LYKQYN-SSNTIMFDDIRRNFLMNPKSGLKI  270 (320)
T ss_dssp             HCTTCC-GGGEEEEESCGGGGTTSGGGEEEC
T ss_pred             ccCCCC-hhHEEEEeCChHHhccCcCceEEe
Confidence               887 999999999997776666666543

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=97.05  E-value=0.00053  Score=76.19  Aligned_cols=85  Identities=14%  Similarity=0.209  Sum_probs=69.6

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEE
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL  481 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l  481 (526)
                      ++.|++.+.+++|+++|+++.++|+.+....+.+.+.+   |+.++|..+         .|+--..+++.+.-. .+.++
T Consensus       554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~l---gi~~v~a~~---------~P~~K~~~v~~l~~~-g~~V~  620 (736)
T 3rfu_A          554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTL---GIKKVVAEI---------MPEDKSRIVSELKDK-GLIVA  620 (736)
T ss_dssp             CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHH---TCCCEECSC---------CHHHHHHHHHHHHHH-SCCEE
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCCEEEEec---------CHHHHHHHHHHHHhc-CCEEE
Confidence            67899999999999999999999999999999999999   876433222         234445556666555 78899


Q ss_pred             EEecCHhhHHHHHHcCCc
Q 009774          482 FVTDVYQEATAAKAAGLE  499 (526)
Q Consensus       482 ~VgDs~~Di~~A~~aG~~  499 (526)
                      ||||+.+|+.+-+.+|+.
T Consensus       621 ~vGDG~ND~paL~~AdvG  638 (736)
T 3rfu_A          621 MAGDGVNDAPALAKADIG  638 (736)
T ss_dssp             EEECSSTTHHHHHHSSEE
T ss_pred             EEECChHhHHHHHhCCEE
Confidence            999999999999999954

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=96.96  E-value=0.00081  Score=64.54  Aligned_cols=18  Identities=28%  Similarity=0.506  Sum_probs=15.8

Q ss_pred             CCceEEEEeccccccccc
Q 009774          282 LFPRCIVLDIEGTTTPIS  299 (526)
Q Consensus       282 ~~ikaVlFD~DGTL~d~~  299 (526)
                      |++|+|+|||||||++..
T Consensus         2 M~~kli~~DlDGTLl~~~   19 (246)
T 3f9r_A            2 MKRVLLLFDVDGTLTPPR   19 (246)
T ss_dssp             CCSEEEEECSBTTTBSTT
T ss_pred             CCceEEEEeCcCCcCCCC
Confidence            679999999999999853

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=96.72  E-value=0.0022  Score=74.02  Aligned_cols=96  Identities=13%  Similarity=0.060  Sum_probs=71.8

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccc----eEEe--CC----------------cCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS----GFFD--TA----------------VGNK  459 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd----~i~~--~~----------------~~~K  459 (526)
                      ++.|++.++++.|+++|+++.++|+.+......+.+.+   |+....+    .++.  +.                ....
T Consensus       603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~l---gi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r  679 (995)
T 3ar4_A          603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRI---GIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFAR  679 (995)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH---TSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEES
T ss_pred             CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHc---CcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEE
Confidence            68899999999999999999999999999999999999   7765332    1221  00                0111


Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774          460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                      -.|+--..+++.+.-. .+.++||||+.+|+.+.++|++...
T Consensus       680 ~~P~~K~~~v~~l~~~-g~~v~~~GDG~ND~~alk~Advgia  720 (995)
T 3ar4_A          680 VEPSHKSKIVEYLQSY-DEITAMTGDGVNDAPALKKAEIGIA  720 (995)
T ss_dssp             CCSSHHHHHHHHHHTT-TCCEEEEECSGGGHHHHHHSTEEEE
T ss_pred             eCHHHHHHHHHHHHHC-CCEEEEEcCCchhHHHHHHCCeEEE
Confidence            1133345566666665 6799999999999999999998544

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=96.46  E-value=0.0066  Score=60.73  Aligned_cols=38  Identities=24%  Similarity=0.364  Sum_probs=36.0

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhc
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS  439 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l  439 (526)
                      .+||++.++++.|+++|++++|||.++.+.++.+.+.+
T Consensus       143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~  180 (327)
T 4as2_A          143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP  180 (327)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence            68999999999999999999999999999999998875

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=95.63  E-value=0.012  Score=55.81  Aligned_cols=30  Identities=10%  Similarity=-0.109  Sum_probs=19.9

Q ss_pred             CCCCCCcEEEEec----CHhhHHHHHHcCCcEEEE
Q 009774          473 GVDKPSEILFVTD----VYQEATAAKAAGLEVVIS  503 (526)
Q Consensus       473 ~~~~p~~~l~VgD----s~~Di~~A~~aG~~~i~v  503 (526)
                      |++ +++++.|||    +.+|+..-+.+|...+.+
T Consensus       198 ~i~-~~~viafGD~~~~~~ND~~Ml~~a~~ag~av  231 (246)
T 2amy_A          198 NDG-YKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV  231 (246)
T ss_dssp             TSC-CSEEEEEECSCC---CCCHHHHCTTEEEEEC
T ss_pred             CCC-HHHEEEECCCCCCCCCcHHHHHhCCcceEEe
Confidence            454 678888888    788888888777655544

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=95.58  E-value=0.0083  Score=56.96  Aligned_cols=22  Identities=18%  Similarity=0.215  Sum_probs=19.1

Q ss_pred             EEEEecCHhhHHHHHHc--CCcEE
Q 009774          480 ILFVTDVYQEATAAKAA--GLEVV  501 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~a--G~~~i  501 (526)
                      ++.|||+.+|+..-+.+  |....
T Consensus       174 via~GD~~ND~~Ml~~a~~g~~va  197 (239)
T 1u02_A          174 AIIAGDDATDEAAFEANDDALTIK  197 (239)
T ss_dssp             EEEEESSHHHHHHHHTTTTSEEEE
T ss_pred             eEEEeCCCccHHHHHHhhCCcEEE
Confidence            89999999999999998  76443

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=95.32  E-value=0.022  Score=65.74  Aligned_cols=97  Identities=16%  Similarity=0.156  Sum_probs=69.6

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccc------------------------cceEEe--C-
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY------------------------LSGFFD--T-  454 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~------------------------fd~i~~--~-  454 (526)
                      ++.|++.+++++|+++|+++.++|+.+......+.+.+   |+...                        +..+++  + 
T Consensus       599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~l---gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l  675 (1028)
T 2zxe_A          599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV---GIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDL  675 (1028)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH---TSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHH
T ss_pred             CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHc---CCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHh
Confidence            68899999999999999999999999999999999988   66521                        011110  0 


Q ss_pred             -----------------CcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774          455 -----------------AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI  502 (526)
Q Consensus       455 -----------------~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~  502 (526)
                                       ....+-.|+--..+.+.+.-. .+.++||||+.+|+.+-+.|++....
T Consensus       676 ~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-g~~V~~iGDG~ND~paLk~AdvGIAm  739 (1028)
T 2zxe_A          676 KDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAM  739 (1028)
T ss_dssp             TTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             hhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhC-CCEEEEEcCCcchHHHHHhCCceEEe
Confidence                             012233344444444444333 56899999999999999999986543

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=94.80  E-value=0.027  Score=54.11  Aligned_cols=31  Identities=6%  Similarity=-0.240  Sum_probs=25.9

Q ss_pred             cCCCCCCcEEEEec----CHhhHHHHHHcCCcEEEE
Q 009774          472 LGVDKPSEILFVTD----VYQEATAAKAAGLEVVIS  503 (526)
Q Consensus       472 l~~~~p~~~l~VgD----s~~Di~~A~~aG~~~i~v  503 (526)
                      +|++ +++++.|||    +.+|+..-+.+|...+.+
T Consensus       206 ~gi~-~~~viafGDs~~~~~NDi~Ml~~~~~~g~av  240 (262)
T 2fue_A          206 DQDS-FDTIHFFGNETSPGGNDFEIFADPRTVGHSV  240 (262)
T ss_dssp             TTSC-CSEEEEEESCCSTTSTTHHHHHSTTSEEEEC
T ss_pred             HCCC-HHHEEEECCCCCCCCCCHHHHhcCccCcEEe
Confidence            4665 889999999    889999999988766666

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=94.45  E-value=0.026  Score=64.09  Aligned_cols=95  Identities=12%  Similarity=0.079  Sum_probs=67.1

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc-c------------------eEEe--C-CcCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-S------------------GFFD--T-AVGNK  459 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f-d------------------~i~~--~-~~~~K  459 (526)
                      ++.|++.+++++|++.|+++.++|+.+......+.+.+   |+.... +                  ..+.  . .....
T Consensus       535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~l---GI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~  611 (920)
T 1mhs_A          535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQL---GLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVF  611 (920)
T ss_dssp             CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHH---TSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCC
T ss_pred             cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHc---CCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeC
Confidence            68899999999999999999999999999999999999   775311 0                  0000  0 11223


Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774          460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI  502 (526)
Q Consensus       460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~  502 (526)
                      |.  -=..+.+.+.-. .+.+.|+||+.+|..+-++|++....
T Consensus       612 P~--~K~~iV~~Lq~~-g~~Vam~GDGvNDapaLk~AdvGIAm  651 (920)
T 1mhs_A          612 PQ--HKYNVVEILQQR-GYLVAMTGDGVNDAPSLKKADTGIAV  651 (920)
T ss_dssp             ST--HHHHHHHHHHTT-TCCCEECCCCGGGHHHHHHSSEEEEE
T ss_pred             HH--HHHHHHHHHHhC-CCeEEEEcCCcccHHHHHhCCcCccc
Confidence            32  112233333333 46899999999999999999975543

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=94.13  E-value=0.028  Score=53.35  Aligned_cols=47  Identities=15%  Similarity=0.154  Sum_probs=40.0

Q ss_pred             CcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEE
Q 009774          455 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVIS  503 (526)
Q Consensus       455 ~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v  503 (526)
                      ....-+++..+..+++.+|++ ++++++|||+.+|+..++.+|+. +.+
T Consensus       157 ~~~~~~K~~~l~~l~~~~~~~-~~~~~~~GD~~nD~~m~~~~g~~-va~  203 (244)
T 1s2o_A          157 LPQRSNKGNATQYLQQHLAME-PSQTLVCGDSGNDIGLFETSARG-VIV  203 (244)
T ss_dssp             EETTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHTSSSEE-EEC
T ss_pred             ccCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHhccCcE-EEE
Confidence            344556788999999999997 99999999999999999998874 444

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=94.08  E-value=0.021  Score=64.75  Aligned_cols=96  Identities=14%  Similarity=0.060  Sum_probs=66.0

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccc-c-------------------ceEEe-CCcCCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-L-------------------SGFFD-TAVGNKR  460 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~-f-------------------d~i~~-~~~~~KP  460 (526)
                      ++.|++.+++++|++.|+++.++|+.+......+.+.+   |+... +                   +.++. ......-
T Consensus       488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~l---Gi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv  564 (885)
T 3b8c_A          488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL---GMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGV  564 (885)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTT---TCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECC
T ss_pred             ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHh---CCccccCCcceeeccccccccchhHHHHHHhhCcEEEEE
Confidence            67899999999999999999999999999999999999   77421 0                   00000 0011122


Q ss_pred             CHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774          461 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       461 ~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                      .|+-=..+.+.+.-. .+.+.|+||+.+|..+-++|++...
T Consensus       565 ~P~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdvGIA  604 (885)
T 3b8c_A          565 FPEHKYEIVKKLQER-KHIVGMTGDGVNDAPALKKADIGIA  604 (885)
T ss_dssp             CHHHHHHHHHHHHHT-TCCCCBCCCSSTTHHHHHHSSSCCC
T ss_pred             CHHHHHHHHHHHHHC-CCeEEEEcCCchhHHHHHhCCEeEE
Confidence            232222233333323 4589999999999999999987543

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=93.98  E-value=0.064  Score=61.95  Aligned_cols=96  Identities=17%  Similarity=0.140  Sum_probs=67.2

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccc------------------------eEEeC---
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS------------------------GFFDT---  454 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd------------------------~i~~~---  454 (526)
                      ++.|++.+++++|+++|+++.++|+.+......+.+.+   |+...-.                        .+.+.   
T Consensus       604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~l---gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l  680 (1034)
T 3ixz_A          604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASV---GIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQL  680 (1034)
T ss_pred             CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc---CCCCCCchHHHHHHHhhCccchhccccccceeEEecHhh
Confidence            68899999999999999999999999999999999988   6632100                        01100   


Q ss_pred             -----------------CcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774          455 -----------------AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       455 -----------------~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                                       ....+-.|+--..+.+.+.-. .+.++++||+.+|+.+-+.||+-..
T Consensus       681 ~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~-g~~V~a~GDG~ND~~mLk~A~vGIA  743 (1034)
T 3ixz_A          681 KDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRL-GAIVAVTGDGVNDSPALKKADIGVA  743 (1034)
T ss_pred             hhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHc-CCEEEEECCcHHhHHHHHHCCeeEE
Confidence                             011122233333344444443 5579999999999999999997544

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=93.67  E-value=0.033  Score=57.48  Aligned_cols=78  Identities=14%  Similarity=0.089  Sum_probs=60.1

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccc-ccce-EE--eCCcCCCCCHHHHHHHHHHc-CC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSG-FF--DTAVGNKRETPSYVEITNSL-GV  474 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~-~fd~-i~--~~~~~~KP~p~~~~~~~~~l-~~  474 (526)
                      .+.+.||+.++|+++. +.|.++|.|.+...++..+++.+   +... +|.. ++  +.++.      .|.+=++++ |.
T Consensus        81 ~V~~RPgl~eFL~~ls-~~yEivIfTas~~~YA~~Vl~~L---Dp~~~~f~~Rl~sRd~cg~------~~~KdL~~ll~r  150 (442)
T 3ef1_A           81 YIKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKII---DPTGKLFQDRVLSRDDSGS------LAQKSLRRLFPC  150 (442)
T ss_dssp             EEEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHH---CTTSTTTTTCEECTTTSSC------SSCCCGGGTCSS
T ss_pred             EEEeCCCHHHHHHHHh-CCcEEEEEcCCCHHHHHHHHHHh---ccCCccccceEEEecCCCC------ceeeehHHhcCC
Confidence            3468899999999999 46999999999999999999999   5555 6776 54  33322      122334444 88


Q ss_pred             CCCCcEEEEecCHh
Q 009774          475 DKPSEILFVTDVYQ  488 (526)
Q Consensus       475 ~~p~~~l~VgDs~~  488 (526)
                      + .+.+++|+|++.
T Consensus       151 d-l~~vvIIDd~p~  163 (442)
T 3ef1_A          151 D-TSMVVVIDDRGD  163 (442)
T ss_dssp             C-CTTEEEEESCSG
T ss_pred             C-cceEEEEECCHH
Confidence            6 999999999984

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=93.28  E-value=0.18  Score=50.71  Aligned_cols=86  Identities=17%  Similarity=0.161  Sum_probs=59.7

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCch---HHHHHHHHh-hcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFG-NSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~---~~~~~~~l~-~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      .++||+.++|+.|+++|+++.++||++   .......+. .+   |+.-..+.++.+....+-    |.   +    . .
T Consensus        29 ~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~l---gi~~~~~~i~ts~~~~~~----~~---~----~-~   93 (352)
T 3kc2_A           29 KPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKL---DVDVSPLQIIQSHTPYKS----LV---N----K-Y   93 (352)
T ss_dssp             EECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHH---TSCCCGGGEECTTGGGGG----GT---T----T-C
T ss_pred             eeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhc---CCCCChhhEeehHHHHHH----HH---h----c-C
Confidence            488999999999999999999999985   233334444 67   887666777733221110    11   1    3 4


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEE
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVIS  503 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v  503 (526)
                      ..+++||-. .-.+.++++|++.+..
T Consensus        94 ~~v~viG~~-~l~~~l~~~G~~~v~~  118 (352)
T 3kc2_A           94 SRILAVGTP-SVRGVAEGYGFQDVVH  118 (352)
T ss_dssp             SEEEEESST-THHHHHHHHTCSEEEE
T ss_pred             CEEEEECCH-HHHHHHHhCCCeEecc
Confidence            578888854 5566788999998864

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=93.08  E-value=0.04  Score=53.30  Aligned_cols=19  Identities=26%  Similarity=0.225  Sum_probs=15.9

Q ss_pred             CCCCceEEEEecccccccc
Q 009774          280 SGLFPRCIVLDIEGTTTPI  298 (526)
Q Consensus       280 ~~~~ikaVlFD~DGTL~d~  298 (526)
                      ..|.+|.|+|||||||++.
T Consensus         5 ~~m~~~li~~DlDGTLl~~   23 (275)
T 1xvi_A            5 SIQQPLLVFSDLDGTLLDS   23 (275)
T ss_dssp             -CCCCEEEEEECTTTTSCS
T ss_pred             cccCceEEEEeCCCCCCCC
Confidence            3477899999999999985

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=92.65  E-value=0.06  Score=51.99  Aligned_cols=100  Identities=10%  Similarity=0.054  Sum_probs=66.3

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeC---chHHHHHHHHhhcCCCCcc-cccceEEeCC-------cCCCCCHHHH-----
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSS---GSRLAQRLIFGNSNYGDLR-KYLSGFFDTA-------VGNKRETPSY-----  465 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn---~~~~~~~~~l~~l~~~gl~-~~fd~i~~~~-------~~~KP~p~~~-----  465 (526)
                      .++|++.+.|++|+++|++++++||   .+.......++.+   |+. ..++.++...       ...+|. ..|     
T Consensus        30 ~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~l---g~~~~~~~~ii~~~~~~~~~l~~~~~~-~v~~~lg~  105 (284)
T 2hx1_A           30 GLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKL---GLFSITADKIISSGMITKEYIDLKVDG-GIVAYLGT  105 (284)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHT---TCTTCCGGGEEEHHHHHHHHHHHHCCS-EEEEEESC
T ss_pred             eeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHC---CcCCCCHhhEEcHHHHHHHHHHhhcCC-cEEEEecC
Confidence            3779999999999999999999998   4556666778888   887 6677776221       112343 344     


Q ss_pred             ---HHHHHHcCCC------------CCCcEEEEecCHh--------hHH-HHHHcCCcEEEEeCC
Q 009774          466 ---VEITNSLGVD------------KPSEILFVTDVYQ--------EAT-AAKAAGLEVVISIRP  506 (526)
Q Consensus       466 ---~~~~~~l~~~------------~p~~~l~VgDs~~--------Di~-~A~~aG~~~i~v~~~  506 (526)
                         ...++.+|+.            ++-+++++++...        ++. .-++.|+. +.+++.
T Consensus       106 ~~l~~~l~~~G~~~~~~~~~~~~~~~~~~avv~~~~~~~~~~~~~~~l~~~L~~~g~~-~i~tn~  169 (284)
T 2hx1_A          106 ANSANYLVSDGIKMLPVSAIDDSNIGEVNALVLLDDEGFNWFHDLNKTVNLLRKRTIP-AIVANT  169 (284)
T ss_dssp             HHHHHTTCBTTEEEEEGGGCCTTTGGGEEEEEECCSSSSCHHHHHHHHHHHHHHCCCC-EEEECC
T ss_pred             HHHHHHHHHCCCeeccCCCCCcccCCCCCEEEEeCCCCcCccccHHHHHHHHhcCCCe-EEEECC
Confidence               6677777762            0346777876442        222 23467999 555554

>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A

Probab=91.11  E-value=1.7  Score=40.88  Aligned_cols=91  Identities=11%  Similarity=0.070  Sum_probs=69.8

Q ss_pred             HHHHHHHHHC-CCeEEEEeCchHHHHHHHHhhcCCCCcccccc--eEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 009774          408 PEALEKWHSL-GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS--GFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVT  484 (526)
Q Consensus       408 ~~~L~~L~~~-G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd--~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~Vg  484 (526)
                      ...|.....+ ++--++||+..--..-.++=-+   ++..+|.  .|++....+  +...|.++.+++|-  .-.-++||
T Consensus       165 ~k~L~~i~sr~~~vNVLVTs~qLVPaLaK~LLy---gL~~~fpieNIYSa~kiG--KesCFerI~~RFG~--k~~yvvIG  237 (274)
T 3geb_A          165 LKALNLINSRPNCVNVLVTTTQLIPALAKVLLY---GLGSVFPIENIYSATKTG--KESCFERIMQRFGR--KAVYVVIG  237 (274)
T ss_dssp             HHHHHHHHHSTTEEEEEEESSCHHHHHHHHHHT---TCTTTSCGGGEEETTTTC--HHHHHHHHHHHHCT--TSEEEEEE
T ss_pred             HHHHHhhccCCceeEEEEecCchHHHHHHHHHh---hcccceecccccchhhcC--HHHHHHHHHHHhCC--CceEEEEC
Confidence            3445555543 6778899999887776677667   7777776  466555544  46899999999984  57888999


Q ss_pred             cCHhhHHHHHHcCCcEEEEeC
Q 009774          485 DVYQEATAAKAAGLEVVISIR  505 (526)
Q Consensus       485 Ds~~Di~~A~~aG~~~i~v~~  505 (526)
                      |....-++|+..+++.+-+..
T Consensus       238 DG~eEe~AAk~~n~PFwrI~~  258 (274)
T 3geb_A          238 DGVEEEQGAKKHNMPFWRISC  258 (274)
T ss_dssp             SSHHHHHHHHHTTCCEEECCS
T ss_pred             CCHHHHHHHHHcCCCeEEeec
Confidence            999999999999999987654

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=87.61  E-value=0.54  Score=44.64  Aligned_cols=84  Identities=14%  Similarity=0.086  Sum_probs=53.7

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchH---HHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSR---LAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~---~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      ++|++.++|++|+++|++++++||.+.   ......++.+   |+....+.++...       ......+++. .. ..+
T Consensus        18 ~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~l---g~~~~~~~i~~~~-------~~~~~~l~~~-~~-~~~   85 (263)
T 1zjj_A           18 AIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKM---GIDVSSSIIITSG-------LATRLYMSKH-LD-PGK   85 (263)
T ss_dssp             ECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTT---TCCCCGGGEEEHH-------HHHHHHHHHH-SC-CCC
T ss_pred             eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHC---CCCCChhhEEecH-------HHHHHHHHHh-CC-CCE
Confidence            569999999999999999999999864   3333445556   7765556665321       1233333333 22 457


Q ss_pred             EEEEecCHhhHHHHHHcCCc
Q 009774          480 ILFVTDVYQEATAAKAAGLE  499 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~aG~~  499 (526)
                      +++||+. .....+++.|+.
T Consensus        86 v~viG~~-~l~~~l~~~G~~  104 (263)
T 1zjj_A           86 IFVIGGE-GLVKEMQALGWG  104 (263)
T ss_dssp             EEEESCH-HHHHHHHHHTSC
T ss_pred             EEEEcCH-HHHHHHHHcCCe
Confidence            7777763 455566666663

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=86.45  E-value=0.26  Score=46.52  Aligned_cols=17  Identities=12%  Similarity=0.024  Sum_probs=13.9

Q ss_pred             CceEEEEeccccccccc
Q 009774          283 FPRCIVLDIEGTTTPIS  299 (526)
Q Consensus       283 ~ikaVlFD~DGTL~d~~  299 (526)
                      |...|+|||||||++..
T Consensus         2 ~~~li~~DlDGTLl~~~   18 (244)
T 1s2o_A            2 RQLLLISDLDNTWVGDQ   18 (244)
T ss_dssp             CSEEEEECTBTTTBSCH
T ss_pred             CCeEEEEeCCCCCcCCH
Confidence            33499999999999854

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	526
d1zs9a1	253	c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien	6e-38
d2g80a1	225	c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast	5e-30
d1pvta_	232	c.74.1.1 (A:) Putative sugar-phosphate aldolase {T	2e-25
d1k0wa_	223	c.74.1.1 (A:) L-ribulose-5-phosphate 4-epimerase {	9e-25
d1ojra_	274	c.74.1.1 (A:) L-rhamnulose-1-phosphate aldolase {E	3e-18
d1e4cp_	206	c.74.1.1 (P:) L-fuculose-1-phosphate aldolase {Esc	6e-18
d1qyia_	380	c.108.1.13 (A:) Hypothetical protein MW1667 (SA154	4e-04
d1zd3a1	225	c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal	0.002

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

 Score =  138 bits (346), Expect = 6e-38
 Identities = 110/246 (44%), Positives = 158/246 (64%), Gaps = 5/246 (2%)

Query: 285 RCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQG 344
             I+LDIEGTTTPI+FV ++LFPY  +NV ++L   ++  E Q D+ LLR Q E+D    
Sbjct: 8   TVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDAHLD 67

Query: 345 VAGAVPIPPGDAGKE--EVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGE 402
            A  +P   G+   +  ++I A+V NV   +  DRK TALKQLQGH+WR  F +  ++ E
Sbjct: 68  GAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMKAE 127

Query: 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRET 462
            F DV  A+ KW   G KVYIYSSGS  AQ+L+FG+S  GD+ + + G FDT +G+K E+
Sbjct: 128 FFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVES 187

Query: 463 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG--FKTI 520
            SY +I +S+G    + ILF+TDV +EA+AA+ A + V + +RPGN  L ++    +  I
Sbjct: 188 ESYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 246

Query: 521 NSFAEI 526
            SF+E+
Sbjct: 247 TSFSEL 252

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  115 bits (287), Expect = 5e-30
 Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 28/246 (11%)

Query: 285 RCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQG 344
              +LDIEGT  PISFV E LFPY  + V + +      +   + +       ++ L   
Sbjct: 4   STYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQL--- 60

Query: 345 VAGAVPIPPGDAGKEEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVF 404
                                 A++  ++  D K   LKQLQG++W  G+ES +++  V+
Sbjct: 61  ---------------------QAHILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVY 99

Query: 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQ----RLIFGNSNYGDLRKYLSGFFDTAVGNKR 460
            D  + +++   +           +L             +  DL  Y+ G+FD     K+
Sbjct: 100 ADAIDFIKRKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKK 159

Query: 461 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTI 520
                          K SE+LF++D   E  AA   G+   ++ RPGN P+P+   ++  
Sbjct: 160 TETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVY 219

Query: 521 NSFAEI 526
            +F  +
Sbjct: 220 KNFETL 225

>d1pvta_ c.74.1.1 (A:) Putative sugar-phosphate aldolase {Thermotoga maritima [TaxId: 2336]} Length = 232

class: Alpha and beta proteins (a/b)
fold: AraD/HMP-PK domain-like
superfamily: AraD/HMP-PK domain-like
family: AraD-like aldolase/epimerase
domain: Putative sugar-phosphate aldolase
species: Thermotoga maritima [TaxId: 2336]

 Score =  102 bits (254), Expect = 2e-25
 Identities = 32/230 (13%), Positives = 77/230 (33%), Gaps = 22/230 (9%)

Query: 28  KETRVLISELCRHFYTLGWVSGTGGSITIKVHDD--------------SIPKPQQLILMS 73
           +ET   I ++       G      G+I++++ +                   P+  +L++
Sbjct: 4   RETIREIQKVAYWLAIKGLSEANAGNISVRLDERPEGYEVKSVNEYGFDYDGPEMYLLIT 63

Query: 74  PSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR--DAGAV 131
            +G +   +  +D  +   +              KP        +    +++   +  A+
Sbjct: 64  ATGSRMREVYEDDSKICLLHVLPGKHYEILHGNGKPTSEFPTHLMIHAKFKEMNPEKKAI 123

Query: 132 IHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLA 191
           +H+H +    +  +    +E     M++   +         VV   +  + E  L     
Sbjct: 124 VHTHPLNLLTLMNLEE-FQELLPKMMKIHPEVLIFFPQGISVVEFEKPGSVELGL----- 177

Query: 192 KAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 241
           K ++      AVL   HG+  +G     A  + E      +  +++  LG
Sbjct: 178 KTVEKSEGKDAVLWDKHGVVAFGKDVAEAYDRVEILEKAAEILLRVLSLG 227

>d1k0wa_ c.74.1.1 (A:) L-ribulose-5-phosphate 4-epimerase {Escherichia coli [TaxId: 562]} Length = 223

class: Alpha and beta proteins (a/b)
fold: AraD/HMP-PK domain-like
superfamily: AraD/HMP-PK domain-like
family: AraD-like aldolase/epimerase
domain: L-ribulose-5-phosphate 4-epimerase
species: Escherichia coli [TaxId: 562]

 Score =  100 bits (249), Expect = 9e-25
 Identities = 36/216 (16%), Positives = 70/216 (32%), Gaps = 14/216 (6%)

Query: 27  VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPED 86
           +++ +  + E          V+ T G+++    +        + ++ PSGV    M  +D
Sbjct: 2   LEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERG------VFVIKPSGVDYSIMTADD 55

Query: 87  MYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMIN 146
           M V+S     +   + KP               +        G ++H+H   + +     
Sbjct: 56  MVVVSIETGEVVEGAKKPSSD-------TPTHRLLYQAFPSIGGIVHTHSRHATIWAQAG 108

Query: 147 PMSKEFRITHMEMIKG-IKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLV 205
                   TH     G I       +  +         N + ++  K      +   VLV
Sbjct: 109 QSIPATGTTHANYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLV 168

Query: 206 RNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 241
            +HG + WG +  +A   A     +    I   QL 
Sbjct: 169 HSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLA 204

>d1ojra_ c.74.1.1 (A:) L-rhamnulose-1-phosphate aldolase {Escherichia coli [TaxId: 562]} Length = 274

class: Alpha and beta proteins (a/b)
fold: AraD/HMP-PK domain-like
superfamily: AraD/HMP-PK domain-like
family: AraD-like aldolase/epimerase
domain: L-rhamnulose-1-phosphate aldolase
species: Escherichia coli [TaxId: 562]

 Score = 82.6 bits (203), Expect = 3e-18
 Identities = 30/242 (12%), Positives = 70/242 (28%), Gaps = 43/242 (17%)

Query: 34  ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQ---------------------LILM 72
           + +     +  GW    GG++T+++ D  I                            ++
Sbjct: 13  MIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIPLSQPMPLLANTPFIV 72

Query: 73  SPSGVQKERMEPEDM-----YVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR- 126
           + SG     ++ +         +  +G              P   +   P    ++ +R 
Sbjct: 73  TGSGKFFRNVQLDPAANLGIVKVDSDGAGYHILWGLTNEAVP---TSELPAHFLSHCERI 129

Query: 127 -----DAGAVIHSHGIESCLVTMI-NPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT 180
                    ++H H      +T +    +  F     E              ++P     
Sbjct: 130 KATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQLWEGSTECLVVFPDGVGILP----- 184

Query: 181 AYENELTDSLAKAI-DAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQ 239
            +    TD++ +A      K + VL   HG++  G +        +         +K++ 
Sbjct: 185 -WMVPGTDAIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDTAEKSAQVLVKVYS 243

Query: 240 LG 241
           +G
Sbjct: 244 MG 245

>d1e4cp_ c.74.1.1 (P:) L-fuculose-1-phosphate aldolase {Escherichia coli [TaxId: 562]} Length = 206

class: Alpha and beta proteins (a/b)
fold: AraD/HMP-PK domain-like
superfamily: AraD/HMP-PK domain-like
family: AraD-like aldolase/epimerase
domain: L-fuculose-1-phosphate aldolase
species: Escherichia coli [TaxId: 562]

 Score = 80.3 bits (197), Expect = 6e-18
 Identities = 33/215 (15%), Positives = 64/215 (29%), Gaps = 31/215 (14%)

Query: 28  KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDM 87
            +    I + C     LG   GT G+++++  D         +L++P+G+  E++    +
Sbjct: 4   NKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQDG--------MLITPTGIPYEKLTESHI 55

Query: 88  YVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMIN 146
                               +           M AY+ R DA AV+H+H +    V+++N
Sbjct: 56  VF----------IDGNGKHEEGKLPQSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSILN 105

Query: 147 PMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVR 206
                                 Y       +                  A     A L++
Sbjct: 106 RSIPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVAL------------ALKNRKATLLQ 153

Query: 207 NHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 241
           +HG+     +   A   A     L    +    + 
Sbjct: 154 HHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAIT 188

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

 Score = 40.6 bits (94), Expect = 4e-04
 Identities = 24/168 (14%), Positives = 48/168 (28%), Gaps = 32/168 (19%)

Query: 390 WRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLI---FGNSNYGDLRK 446
           ++TG+   E+     D+V   L      G ++ I +        +     G   Y +   
Sbjct: 203 FKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADF 262

Query: 447 YLSG-----------------------FFDTAVGNKRETPSYVEITNSLGVDKPSEILFV 483
             +                        +     GN R+            V+   ++  V
Sbjct: 263 IATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVN-KDDVFIV 321

Query: 484 TDVYQEATAAKAAGLEVV-----ISIRPGNGPLPENHGFKTINSFAEI 526
            D   +  +A+  G   +     +  +   G L  +H    IN   E+
Sbjct: 322 GDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGEL 369

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (85), Expect = 0.002
 Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 12/152 (7%)

Query: 381 ALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 440
            +   +    +  F+      ++   + +A       G    I ++     +    G + 
Sbjct: 78  KVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQ 137

Query: 441 YGDLRKYLSGFFDTAVG------NKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAK 494
              L   L   FD  +        K E   Y  + ++L    PSE++F+ D+      A+
Sbjct: 138 ---LMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKAS-PSEVVFLDDIGANLKPAR 193

Query: 495 AAGLEVVISIRPGNGP--LPENHGFKTINSFA 524
             G+  ++          L +  G + +N+ A
Sbjct: 194 DLGMVTILVQDTDTALKELEKVTGIQLLNTPA 225

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	526
d1e4cp_	206	L-fuculose-1-phosphate aldolase {Escherichia coli	100.0
d1ojra_	274	L-rhamnulose-1-phosphate aldolase {Escherichia col	100.0
d1pvta_	232	Putative sugar-phosphate aldolase {Thermotoga mari	100.0
d1k0wa_	223	L-ribulose-5-phosphate 4-epimerase {Escherichia co	100.0
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	100.0
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	99.95
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.95
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.95
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.94
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.94
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.94
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.93
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.93
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.93
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.93
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.92
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.92
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.91
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.91
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.9
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.87
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.86
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.85
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.8
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.8
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.78
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.74
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	99.74
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	99.67
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.66
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	99.65
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	99.61
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	99.59
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	99.52
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	99.48
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	99.46
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	99.14
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	98.87
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	98.78
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	98.76
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	98.6
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	98.4
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	98.38
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	98.33
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	98.31
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	98.3
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	98.16
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	98.09
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	97.99
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	97.98
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	97.61
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	97.6
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	97.08
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	97.03
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	96.73
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	96.63
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	96.62
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	96.24
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	95.08
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	94.85
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	92.3
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	87.54
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	86.74
d1y8aa1	308	Hypothetical protein AF1437 {Archaeon Archaeoglobu	85.52
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	84.15

>d1e4cp_ c.74.1.1 (P:) L-fuculose-1-phosphate aldolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: AraD/HMP-PK domain-like
superfamily: AraD/HMP-PK domain-like
family: AraD-like aldolase/epimerase
domain: L-fuculose-1-phosphate aldolase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.1e-43  Score=332.71  Aligned_cols=201  Identities=20%  Similarity=0.296  Sum_probs=176.9

Q ss_pred             ccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCC
Q 009774           25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP  104 (526)
Q Consensus        25 ~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p  104 (526)
                      |+.+++|++|+++||+|+++||+.+++||||+|+++        .|||||||.++++++++|++.||++|++++|.  +|
T Consensus         1 m~~~~l~~~l~~~~r~l~~~Gl~~g~~GniS~R~~d--------~~lIt~sG~~~~~l~~~dlv~v~~~g~~~~g~--~p   70 (206)
T d1e4cp_           1 MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQD--------GMLITPTGIPYEKLTESHIVFIDGNGKHEEGK--LP   70 (206)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTTSCCTTCCEEEEEETT--------EEEECCTTCCGGGCCGGGCEEECTTCCBCTTC--CC
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEeCC--------cEEEeCCCCChhhCCHHhcccccccccccccc--cc
Confidence            567899999999999999999999999999999977        89999999999999999999999999998874  45


Q ss_pred             CCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-CC
Q 009774          105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AY  182 (526)
Q Consensus       105 ~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~  182 (526)
                              |+|+.+|..||+.| |++||+|+||+|++++|+....   ++....+....+++       .+++++|. |+
T Consensus        71 --------s~e~~~H~~iy~~rpdv~avvH~H~~~~~a~s~~~~~---~~~~~~~~~~~~~~-------~~~~~~y~~~g  132 (206)
T d1e4cp_          71 --------QSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSILNRS---IPAIHYMIAAAGGN-------SIPCAPYATFG  132 (206)
T ss_dssp             --------CTTHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCC---BCSSSGGGGGGTSS-------CBCEECCCCTT
T ss_pred             --------chhHHHHHHHHHhccCcceEEEecCcceeeehhhcCC---CCchhHHHHHHcCC-------ceeecCCcCCc
Confidence                    89999999999999 9999999999999999999753   32222222222222       48889985 68


Q ss_pred             chHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccccc
Q 009774          183 ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK  256 (526)
Q Consensus       183 ~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~  256 (526)
                      +.++++.+++++++   .+++||+|||+++||+|+++||.+++.+|++|++++.++++|++.+.+++++++++.
T Consensus       133 ~~~~~~~~~~~l~~---~~~~ll~nHG~~~~G~s~~eA~~~~~~lE~~a~~~l~a~~~G~~~~~l~~ee~~~~~  203 (206)
T d1e4cp_         133 TRELSEHVALALKN---RKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVVL  203 (206)
T ss_dssp             CHHHHHHHHHHTSS---CSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCSSCCCCCHHHHHHHH
T ss_pred             chhHHHHHHHHHhc---CCceeecCcccEEEcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHH
Confidence            99999999999986   499999999999999999999999999999999999999999998888887777653

>d1ojra_ c.74.1.1 (A:) L-rhamnulose-1-phosphate aldolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: AraD/HMP-PK domain-like
superfamily: AraD/HMP-PK domain-like
family: AraD-like aldolase/epimerase
domain: L-rhamnulose-1-phosphate aldolase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8e-42  Score=335.45  Aligned_cols=216  Identities=13%  Similarity=0.138  Sum_probs=174.9

Q ss_pred             hhccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCC---------------------CCCccEEEEeccCCCCCC
Q 009774           23 EGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSI---------------------PKPQQLILMSPSGVQKER   81 (526)
Q Consensus        23 ~~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~---------------------~~~~~~~litpsG~~~~~   81 (526)
                      .......++++|++++|.+|++||+.+++||||||++++++                     .-.+++|||||||.++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~gGNiSvR~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~g~~~lITpSG~~~~~   81 (274)
T d1ojra_           2 QNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIPLSQPMPLLANTPFIVTGSGKFFRN   81 (274)
T ss_dssp             CCGGGSHHHHHHHHHHHHHHHHTCCCTTCCEEEEECCHHHHGGGGGGSCSSCEEEECSSCCGGGTTCEEEEEBTTCCGGG
T ss_pred             cccchHHHHHHHHHHHHHHHHcCCcccCCCeEEEEcCccccccccccccccccccccccccccccCCeEEEeCCCcccCc
Confidence            34556678999999999999999999999999999864210                     001358999999999999


Q ss_pred             CCCCC-----EEEEeCCCCccc------CCCCCCCCCCCCCCCCchHHHHHHHHhc------CcceEEecCChHHHHHHh
Q 009774           82 MEPED-----MYVLSGNGTTLS------SPSPKPYPHKPPKCSDCAPLFMKAYEKR------DAGAVIHSHGIESCLVTM  144 (526)
Q Consensus        82 l~~~d-----iv~vd~dg~~~~------g~~~~p~~~~p~~~S~E~~lH~~iy~~~------dv~aVvH~H~~~~~a~a~  144 (526)
                      ++++|     |++||.||++++      |. .+|        |+|+.||+.|||.|      |++||+|+||+|++++|+
T Consensus        82 l~~~d~~~~~iv~vd~dG~~~~~~~~~~~~-~kP--------SsE~~lH~~iyr~R~~~~~Pdv~aVvHtH~~~~~alS~  152 (274)
T d1ojra_          82 VQLDPAANLGIVKVDSDGAGYHILWGLTNE-AVP--------TSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTY  152 (274)
T ss_dssp             TTTCHHHHEEEEEECTTSSEEEEEEECTTT-CCB--------CTTHHHHHHHHHHHHHHTTTCCCEEEEECCHHHHHHTT
T ss_pred             CCcchhcccceEEECCCCCEEecccccCCC-CCC--------chHHHHHHHHHHHHhhccCCCceEEEEeCCchHHHHHh
Confidence            99997     899999999863      32 244        99999999999974      999999999999999999


Q ss_pred             hcCCCCcc-----cccHHHHHhhhcCCcccCccceeeecCC-CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHH
Q 009774          145 INPMSKEF-----RITHMEMIKGIKGHGYYDELVVPIIENT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWI  218 (526)
Q Consensus       145 ~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~  218 (526)
                      ++......     +....+....+++       .||++||. |++.++++.+++++++   .++|||+|||+++||+|+.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~i~~~py~~pgs~ela~~v~~~l~d---~~avLL~nHGvv~~G~sl~  222 (274)
T d1ojra_         153 VLENDTAVFTRQLWEGSTECLVVFPD-------GVGILPWMVPGTDAIGQATAQEMQK---HSLVLWPFHGVFGSGPTLD  222 (274)
T ss_dssp             TSCSCHHHHHHHHHHTSTTHHHHCTT-------CEEECCCCCSSSHHHHHHHHHHHTT---CSEEEETTTEEEEEESSHH
T ss_pred             ccccchhhhhccccccccceeEEecC-------ccceecCcCCCCHHHHHHHHHHcCC---CeEEEeeccCCeEecCCHH
Confidence            86532111     0000111111222       49999995 6999999999999986   5999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 009774          219 NAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL  257 (526)
Q Consensus       219 eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~  257 (526)
                      +||.+++.+|++|++++.++++|+.....+++++++++.
T Consensus       223 eA~~~~e~lE~~A~i~l~a~~~G~~~~~l~~eei~~l~~  261 (274)
T d1ojra_         223 ETFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGK  261 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCSSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            999999999999999999999998766666778888765

>d1pvta_ c.74.1.1 (A:) Putative sugar-phosphate aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: AraD/HMP-PK domain-like
superfamily: AraD/HMP-PK domain-like
family: AraD-like aldolase/epimerase
domain: Putative sugar-phosphate aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3e-39  Score=310.37  Aligned_cols=199  Identities=17%  Similarity=0.239  Sum_probs=165.9

Q ss_pred             HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCC--------------CCCccEEEEeccCCCCCCCCCCCEEEEeC
Q 009774           27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSI--------------PKPQQLILMSPSGVQKERMEPEDMYVLSG   92 (526)
Q Consensus        27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~--------------~~~~~~~litpsG~~~~~l~~~div~vd~   92 (526)
                      .++++++|++++|+|+++||+.+++||||+|+++++.              ....+.|||||||.++++|+++|+++|++
T Consensus         3 ~~e~~~el~~~~~~l~~~Gl~~~~~GNiS~R~~~~~~~~~~~~~~~~~~~~~~~~~~~lItpsG~~~~~l~~~d~~~~~l   82 (232)
T d1pvta_           3 MRETIREIQKVAYWLAIKGLSEANAGNISVRLDERPEGYEVKSVNEYGFDYDGPEMYLLITATGSRMREVYEDDSKICLL   82 (232)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSSBTTBEEEEEEESSCCSSCCCCEEEEEEEEECSCCEEEEEEBTTCCHHHHTTCGGGEEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCccccccccccccccccCcCCEEEEeCCCCcHhhCCHhHceEEEE
Confidence            5788999999999999999999999999999987431              22345799999999999999999888776


Q ss_pred             C------CCcccCCCCCCCCCCCCCCCCchHHHHHHHHh----c-CcceEEecCChHHHHHHhhcCCCCccc---ccHHH
Q 009774           93 N------GTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEK----R-DAGAVIHSHGIESCLVTMINPMSKEFR---ITHME  158 (526)
Q Consensus        93 d------g~~~~g~~~~p~~~~p~~~S~E~~lH~~iy~~----~-dv~aVvH~H~~~~~a~a~~~~~~~~~~---~~~~~  158 (526)
                      +      |++++|. .||        |+|+.+|..||++    | |++||+|+||+|++++++.......++   ....+
T Consensus        83 ~~~~~~~~~~~~G~-~kP--------SsE~~~H~~iy~~~~~~rPdv~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~e  153 (232)
T d1pvta_          83 HVLPGKHYEILHGN-GKP--------TSEFPTHLMIHAKFKEMNPEKKAIVHTHPLNLLTLMNLEEFQELLPKMMKIHPE  153 (232)
T ss_dssp             EECSEEEEEEEECS-SCB--------CTTHHHHHHHHHHHHHSCTTCCEEEEECCHHHHHHTTSGGGTTTHHHHTTSSHH
T ss_pred             ecccCCCCceecCC-CCc--------CccchhhHHHHHHHHhcCCCceEEEEcCCHHHHHHHhcccccccchhhhhhhhh
Confidence            4      5677876 355        9999999999986    7 999999999999999998764322221   11233


Q ss_pred             HHhhhcCCcccCccceeeecCC-CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHH
Q 009774          159 MIKGIKGHGYYDELVVPIIENT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKL  237 (526)
Q Consensus       159 ~~~~~~g~~~~~~~~vpv~~~~-~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a  237 (526)
                      ....+++       .||++||. |++.++++.+++.+++   .+++||+|||+++||+|+++|+.+++.+|++||+++.+
T Consensus       154 ~~~~~~~-------~i~v~~y~~pg~~ela~~~~~~l~~---~~~vll~nHGv~~~G~s~~eA~~~~~~lE~~a~~~l~a  223 (232)
T d1pvta_         154 VLIFFPQ-------GISVVEFEKPGSVELGLKTVEKSEG---KDAVLWDKHGVVAFGKDVAEAYDRVEILEKAAEILLRV  223 (232)
T ss_dssp             HHHHCSS-------CCEEECCCSTTCHHHHHHHHHHTSS---CSEEEETTSCEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hheeecC-------ceeecccccchhHHHHHHHHHhhCC---CCEEEECCCCcEEEcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3332222       49999995 7899999999999986   59999999999999999999999999999999999999


Q ss_pred             HhCCCCC
Q 009774          238 HQLGLDW  244 (526)
Q Consensus       238 ~~~g~~~  244 (526)
                      +++|..+
T Consensus       224 ~~~G~~p  230 (232)
T d1pvta_         224 LSLGRNP  230 (232)
T ss_dssp             HTTTCSC
T ss_pred             HHcCCCC
Confidence            9999753

>d1k0wa_ c.74.1.1 (A:) L-ribulose-5-phosphate 4-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: AraD/HMP-PK domain-like
superfamily: AraD/HMP-PK domain-like
family: AraD-like aldolase/epimerase
domain: L-ribulose-5-phosphate 4-epimerase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.7e-38  Score=300.95  Aligned_cols=200  Identities=19%  Similarity=0.253  Sum_probs=164.0

Q ss_pred             HHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCC-CcccCCCCCCCC
Q 009774           28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNG-TTLSSPSPKPYP  106 (526)
Q Consensus        28 ~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg-~~~~g~~~~p~~  106 (526)
                      +++|++|++++++|+++||+.+++||||+|++++      +.|||||||.++++++++||++||++| ++++|. .+|  
T Consensus         3 ~~l~~~~~~a~~~l~~~glv~~~~GNiSvr~~~~------~~~~It~sG~~~~~l~~~d~~~vd~~~~~~~~g~-~~~--   73 (223)
T d1k0wa_           3 EDLKRQVLEANLALPKHNLVTLTWGNVSAVDRER------GVFVIKPSGVDYSIMTADDMVVVSIETGEVVEGA-KKP--   73 (223)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCTTCCEEEEEETTT------TEEEECBSSCCTTTCCGGGCEEEETTTCCEEECS-SCB--
T ss_pred             HHHHHHHHHHHHHHHHCcCccCCCCeEEEEecCC------CEEEEeCCCCChhhCChhHeEEEEcccccccccc-ccc--
Confidence            5799999999999999999999999999999763      599999999999999999999999875 566665 344  


Q ss_pred             CCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecC------
Q 009774          107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIEN------  179 (526)
Q Consensus       107 ~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~------  179 (526)
                            |+|+.+|..||+.+ |++||+|+||++++++++........   ..+....+.+.       +++.++      
T Consensus        74 ------s~e~~~H~~i~~~~pd~~aviH~H~~~~~a~s~~~~~~~~~---~~~~~~~~~~~-------~~~~~~~~~~~~  137 (223)
T d1k0wa_          74 ------SSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPAT---GTTHANYFYGT-------IPCTRKMTDAEI  137 (223)
T ss_dssp             ------CTTHHHHHHHHHHCTTCCEEEECCCHHHHHHHHHTCCBCCC---SHHHHTTCSSC-------BCBCCCCCHHHH
T ss_pred             ------cchhhHHHHHHhhCCCcccccccCCcceehhhhhccccccc---hHHHHHHhCCc-------eeeecccccccc
Confidence                  89999999999999 99999999999999999987532222   22222223221       333332      


Q ss_pred             -CCCchHHHHHHHHHHhhC----CCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc
Q 009774          180 -TAYENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPT  252 (526)
Q Consensus       180 -~~~~~~la~~i~~~l~~~----~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~  252 (526)
                       .++..++++.+++.+++.    ++.++|||+|||+++||+|+++||.+++.+|++|++++.|+++|++.+..+++.+
T Consensus       138 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~vll~nHG~~~~G~s~~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~e~~  215 (223)
T d1k0wa_         138 NGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLL  215 (223)
T ss_dssp             HSSHHHHHHHHHHHHHHHTTCCTTTCCEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCCCHHHH
T ss_pred             ccccchhhHHHHHHHHHHhhhhccCCCEEEEeCceeEEecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHH
Confidence             245678888999988763    4568999999999999999999999999999999999999999987665555443

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-32  Score=261.96  Aligned_cols=239  Identities=47%  Similarity=0.768  Sum_probs=190.9

Q ss_pred             CCceEEEEeccccccccccccccchhhHHhhHHhhhhhhcCChhhHHHHHHHHHHhHHhhhhccCCccCCCCCCC-ch--
Q 009774          282 LFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDA-GK--  358 (526)
Q Consensus       282 ~~ikaVlFD~DGTL~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--  358 (526)
                      ..|++||||+||||+|+.++++.++|++.+.+.+++.+++..+.....+..++..........  +..+...... ..  
T Consensus         5 ~~i~~vlfD~dGTl~~~~~v~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   82 (253)
T d1zs9a1           5 AEVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDAHLD--GAVPIPAASGNGVDD   82 (253)
T ss_dssp             TTCCEEEECCBTTTBCHHHHHHTHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHTTTST--TCCCCCCCSCSSHHH
T ss_pred             CCCCEEEEeCcCCCccchhhhhhhhHHHHHHHHHHHHHhcCChhHHHHHHHHHHhhhhhhhhh--hhhhhhhhhhcchhh
Confidence            579999999999999999999999999999999999999888877777777666544433222  2222222211 11  


Q ss_pred             -HHHHHHHHHHHHHHHhhhhcchhhHhhhHHHHHHhhhcccccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHh
Q 009774          359 -EEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFG  437 (526)
Q Consensus       359 -~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~  437 (526)
                       ....+....++..+.....+.....++....|+..|........+|||+.++|++|+++|++++|+||++...++.+++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~  162 (253)
T d1zs9a1          83 LQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFG  162 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHH
T ss_pred             HHHhHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHhhhcccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHH
Confidence             2233444555555666667777778888889999998887788999999999999999999999999999999999999


Q ss_pred             hcCCCCcccccceE---EeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCC
Q 009774          438 NSNYGDLRKYLSGF---FDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPEN  514 (526)
Q Consensus       438 ~l~~~gl~~~fd~i---~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~  514 (526)
                      .+   ++.++|+..   +++....||+|++|+.+++++|++ |++|+||||+..|+.+|+++||++|+|.++++....+.
T Consensus       163 ~~---~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~-p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~  238 (253)
T d1zs9a1         163 HS---TEGDILELVDGHFDTKIGHKVESESYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDD  238 (253)
T ss_dssp             TB---TTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHH
T ss_pred             Hc---CcchhhhhcceeeccccccCCCcHHHHHHHHHhCCC-cCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchh
Confidence            99   776666643   355677899999999999999998 99999999999999999999999999999866544332


Q ss_pred             --CCCeEecCCCCC
Q 009774          515 --HGFKTINSFAEI  526 (526)
Q Consensus       515 --~~~~~i~~l~eL  526 (526)
                        .++.+|+||.||
T Consensus       239 ~~~~~~~i~sl~EL  252 (253)
T d1zs9a1         239 EKTYYSLITSFSEL  252 (253)
T ss_dssp             HHHHSCEESSGGGC
T ss_pred             hcCCCcEECChHHh
Confidence              227899999997

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=3e-28  Score=229.89  Aligned_cols=215  Identities=35%  Similarity=0.610  Sum_probs=164.0

Q ss_pred             CceEEEEeccccccccccccccchhhHHhhHHhhhhhhcCChhhHHHHHHHHHHhHHhhhhccCCccCCCCCCCchHHHH
Q 009774          283 FPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVI  362 (526)
Q Consensus       283 ~ikaVlFD~DGTL~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (526)
                      ++++||||+||||+|++++++.++|++.+.+.+++..++...........++                    ....    
T Consensus         2 ~~~~~lfD~dGTl~d~~~v~d~lfp~~~~~~~~~l~~~~~~~~~~~~~~~~~--------------------~~~~----   57 (225)
T d2g80a1           2 NYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFH--------------------IDNK----   57 (225)
T ss_dssp             CCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHHHHHHHTTC--------------------CCCH----
T ss_pred             CCCEEEEcCCCCCcccHhhhhhhhHHHHHHHHHHHHHhcCChHHHHHHHHhh--------------------hhhH----
Confidence            5799999999999999988999999999999999887765544322222110                    1112    


Q ss_pred             HHHHHHHHHHHhhhhcchhhHhhhHHHHHHhhhcccccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhh----
Q 009774          363 AALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN----  438 (526)
Q Consensus       363 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~----  438 (526)
                      +.+...+..+...+........+....|+..|........+++++.+++..    +.++++.|+............    
T Consensus        58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  133 (225)
T d2g80a1          58 EQLQAHILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDP  133 (225)
T ss_dssp             HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHTTSCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCT
T ss_pred             HHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhHHHHHhh----HHhhhhhhhccchhhhhhhhhhhhh
Confidence            223333444555555566667777788888888777677788888777754    456889999887765544321    


Q ss_pred             ----cCCCCcccccceEE-eCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCC
Q 009774          439 ----SNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPE  513 (526)
Q Consensus       439 ----l~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~  513 (526)
                          +...++.++|+.++ ++....||+|++|+.+++++|++ |++|+||||+..|+.+|+++||++|||+|+++.+..+
T Consensus       134 ~~~~l~~~~l~~~Fd~v~~~~~~~~KP~p~~f~~~~~~lg~~-p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~~~~~  212 (225)
T d2g80a1         134 NAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRDIGAK-ASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPD  212 (225)
T ss_dssp             TCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCS
T ss_pred             HHHHHHhcCCccccceeeeccccCCCCChhHhHHHHHhcccC-chhceeecCCHHHHHHHHHcCCEEEEEeCCCCCCCcc
Confidence                12238999999998 44556799999999999999997 9999999999999999999999999999987776666


Q ss_pred             CCCCeEecCCCCC
Q 009774          514 NHGFKTINSFAEI  526 (526)
Q Consensus       514 ~~~~~~i~~l~eL  526 (526)
                      ..++.+|++|.||
T Consensus       213 ~~~~~~i~~~~eL  225 (225)
T d2g80a1         213 GQKYQVYKNFETL  225 (225)
T ss_dssp             SCCSCEESCSTTC
T ss_pred             cCCCCccCChhhC
Confidence            6668899999997

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=1.7e-27  Score=224.76  Aligned_cols=122  Identities=20%  Similarity=0.226  Sum_probs=109.7

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      .+++||+.++|+.|+++|++++|+||++...+..+++.+   |+.++|+.++  ++....||+|++|+.+++++|++ |+
T Consensus        87 ~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~---~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~-~~  162 (218)
T d1te2a_          87 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMF---DLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVD-PL  162 (218)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSC-GG
T ss_pred             ccccchHHHHHHHhhhccccccccccccccccccccccc---cccccccccccccccccchhhHHHHHHHHHHcCCC-ch
Confidence            358999999999999999999999999999999999999   9999999998  45788999999999999999997 99


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCC-CCCCCeEecCCCCC
Q 009774          479 EILFVTDVYQEATAAKAAGLEVVISIRPGNGPLP-ENHGFKTINSFAEI  526 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~-~~~~~~~i~~l~eL  526 (526)
                      +|+||||+..|+.+|+++||.+|+|.++...... ...++++|+|+.||
T Consensus       163 ~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el  211 (218)
T d1te2a_         163 TCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL  211 (218)
T ss_dssp             GEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGC
T ss_pred             hcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhC
Confidence            9999999999999999999999999876433332 23448999999986

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.95  E-value=1.6e-27  Score=223.42  Aligned_cols=130  Identities=14%  Similarity=0.136  Sum_probs=112.3

Q ss_pred             HhhhcccccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHH
Q 009774          392 TGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEIT  469 (526)
Q Consensus       392 ~~y~~~~~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~  469 (526)
                      +.+.....+++++||+.++|+.|++ +++++|+||++...++.+++++   ++.++|+.++  +.....||+|++|+.++
T Consensus        72 ~~~~~~~~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~KP~p~~~~~~~  147 (207)
T d2hdoa1          72 DVMASHYDQIELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSY---PFMMRMAVTISADDTPKRKPDPLPLLTAL  147 (207)
T ss_dssp             HHHTTCGGGCEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTS---GGGGGEEEEECGGGSSCCTTSSHHHHHHH
T ss_pred             hhhcccccccccccchhhhhhhhcc-cccccccccccccccccccccc---cccccccccccccccccchhhhhhhcccc
Confidence            3344444567899999999999986 6999999999999999999999   9999999998  55788999999999999


Q ss_pred             HHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          470 NSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       470 ~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      +++|++ |++|+||||+.+|+.+|+++||.+|++.+|..........++.++++.||
T Consensus       148 ~~~~~~-~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dl  203 (207)
T d2hdoa1         148 EKVNVA-PQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDI  203 (207)
T ss_dssp             HHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGG
T ss_pred             cceeee-ccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHHHH
Confidence            999997 99999999999999999999999999998744433223348889998875

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.94  E-value=1.8e-26  Score=217.81  Aligned_cols=124  Identities=20%  Similarity=0.220  Sum_probs=111.3

Q ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774          399 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK  476 (526)
Q Consensus       399 ~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~  476 (526)
                      ...+++||+.++|+.|+++|++++++||++...++.+++.+   |+.++|+.++  +..+..||+|++|..++++++++ 
T Consensus        92 ~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~---gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~-  167 (224)
T d2hsza1          92 NISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAF---GIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLY-  167 (224)
T ss_dssp             SSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT---TCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCC-
T ss_pred             cccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhc---CchhhccccccccccccccccchhhHHHHHHhhhh-
Confidence            34579999999999999999999999999999999999999   9999999998  45788899999999999999997 


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCC-CCC-CCCCCeEecCCCCC
Q 009774          477 PSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLP-ENHGFKTINSFAEI  526 (526)
Q Consensus       477 p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~-~~~-~~~~~~~i~~l~eL  526 (526)
                      |++|+||||+..|+.+|+++|+.+|++.++... ... +..++++++|+.||
T Consensus       168 ~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL  219 (224)
T d2hsza1         168 PKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADI  219 (224)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGG
T ss_pred             hhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHH
Confidence            999999999999999999999999999998433 222 23358999999886

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.94  E-value=1e-26  Score=221.56  Aligned_cols=121  Identities=15%  Similarity=0.162  Sum_probs=108.6

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      ..++||+.++|+.|++ |++++++||++...++.+++.+   |+.++||.++  ++.+..||+|++|..+++++|++ |+
T Consensus        99 ~~~~p~~~~~L~~l~~-~~~i~i~Sn~~~~~~~~~l~~~---gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~-p~  173 (230)
T d1x42a1          99 GELYPEVVEVLKSLKG-KYHVGMITDSDTEYLMAHLDAL---GIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVK-GE  173 (230)
T ss_dssp             CCBCTTHHHHHHHHBT-TBEEEEEESSCHHHHHHHHHHH---TCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCC-GG
T ss_pred             CcccccHHHHHHHhhc-cCceeeeeccccccchhhhccc---ccccccccccccccccccchhhHHHHHHHhhhccc-cc
Confidence            4689999999999975 7999999999999999999999   9999999998  45778899999999999999997 99


Q ss_pred             cEEEEecCH-hhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          479 EILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       479 ~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      +|+||||+. +|+.+|+++||++|++++++........++++|+|+.||
T Consensus       174 ~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el  222 (230)
T d1x42a1         174 EAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV  222 (230)
T ss_dssp             GEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHH
T ss_pred             ccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHH
Confidence            999999996 799999999999999998865544444558999999875

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.94  E-value=5.6e-26  Score=214.16  Aligned_cols=124  Identities=26%  Similarity=0.313  Sum_probs=111.2

Q ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774          399 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK  476 (526)
Q Consensus       399 ~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~  476 (526)
                      ....++|++.++|+.|+++|++++++||++...++..+++.   ++..+||.++  ++.+..||+|++|+.+++++|++ 
T Consensus        90 ~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~---~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~-  165 (220)
T d1zrna_          90 LRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHA---GLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLD-  165 (220)
T ss_dssp             GGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSC-
T ss_pred             ccccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhc---cccccccceeeeeeeeccccHHHHHHHHHHHhCCC-
Confidence            34579999999999999999999999999999999999999   9999999998  45778899999999999999997 


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCC-CCCCCCCCeEecCCCCC
Q 009774          477 PSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLPENHGFKTINSFAEI  526 (526)
Q Consensus       477 p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~-~~~~~~~~~~i~~l~eL  526 (526)
                      |++|+||||+..|+.+|+++||++||+++++.. ......++++|+||.||
T Consensus       166 p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el  216 (220)
T d1zrna_         166 RSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV  216 (220)
T ss_dssp             GGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHH
T ss_pred             CceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHH
Confidence            999999999999999999999999999987443 33344569999998774

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.93  E-value=2.5e-26  Score=222.45  Aligned_cols=106  Identities=16%  Similarity=0.140  Sum_probs=97.1

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc-ceEE--eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFF--DTAVGNKRETPSYVEITNSLGVDK  476 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f-d~i~--~~~~~~KP~p~~~~~~~~~l~~~~  476 (526)
                      ...++||+.++|+.|+++|++++|+||++...++.+++++   |+.++| |.++  ++....||+|++|..+++++|+.|
T Consensus        97 ~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~---~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p  173 (257)
T d1swva_          97 YASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEA---ALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYP  173 (257)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHH---HHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCS
T ss_pred             cCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHH---hhcccccccccccccccccccChHHHHHHHHHhCCCC
Confidence            3479999999999999999999999999999999999999   999987 6666  457788999999999999999962


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCcEEEEeCCCC
Q 009774          477 PSEILFVTDVYQEATAAKAAGLEVVISIRPGN  508 (526)
Q Consensus       477 p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~  508 (526)
                      +++|+||||+..|+.+|+++||.+|+|.+|.+
T Consensus       174 ~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~  205 (257)
T d1swva_         174 MNHMIKVGDTVSDMKEGRNAGMWTVGVILGSS  205 (257)
T ss_dssp             GGGEEEEESSHHHHHHHHHTTSEEEEECTTCT
T ss_pred             cceEEEEeCChhhHHHHHHCCCEEEEEccCCC
Confidence            59999999999999999999999999999854

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.93  E-value=1.6e-25  Score=208.97  Aligned_cols=123  Identities=11%  Similarity=0.219  Sum_probs=104.4

Q ss_pred             HhhhcccccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHH
Q 009774          392 TGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEIT  469 (526)
Q Consensus       392 ~~y~~~~~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~  469 (526)
                      ..+........++||+.++|+.|+++|++++|+||++.. ...+++++   |+.+||+.++  +.....||+|++|+.++
T Consensus        72 ~~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~-~~~~l~~~---gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~  147 (204)
T d2go7a1          72 QSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNN-AFTILKDL---GVESYFTEILTSQSGFVRKPSPEAATYLL  147 (204)
T ss_dssp             HHHTTCGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHHH---TCGGGEEEEECGGGCCCCTTSSHHHHHHH
T ss_pred             HHHHhhcccCcccchHHhhhhcccccccchhhhcccchh-hhhhhhhc---ccccccccccccccccccchhHHHHHHHH
Confidence            334444556789999999999999999999999998875 45689999   9999999999  45778999999999999


Q ss_pred             HHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCC
Q 009774          470 NSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE  525 (526)
Q Consensus       470 ~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e  525 (526)
                      ++++++ |++|+||||+.+|+.+|+++||.+|++.++...      +++.++++.|
T Consensus       148 ~~~~~~-p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~~~------~~~~~~~~~d  196 (204)
T d2go7a1         148 DKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFLESTYE------GNHRIQALAD  196 (204)
T ss_dssp             HHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESSCCSCT------TEEECSSTTH
T ss_pred             HHhCCC-CceEEEEeCCHHHHHHHHHcCCeEEEEcCCCCC------cCeecCCHHH
Confidence            999997 999999999999999999999999999876322      2455666544

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=3.8e-25  Score=212.44  Aligned_cols=122  Identities=20%  Similarity=0.311  Sum_probs=105.0

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++||+.++|+.|++ |++++|+||++...++..++.+   |+.++||.++  ++.+..||+|++|..+++++|++ |
T Consensus       107 ~~~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~---gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~-~  181 (247)
T d2gfha1         107 HMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEAC---ACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQ-P  181 (247)
T ss_dssp             TCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHH---TCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCC-G
T ss_pred             cCccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhc---cccccccccccccccccchhhhhhHHHHHHHhhcC-H
Confidence            45799999999999984 7999999999999999999999   9999999988  45778999999999999999997 9


Q ss_pred             CcEEEEecCH-hhHHHHHHcCCcEE-EEeCCCCCCC-CCCCCCeEecCCCCC
Q 009774          478 SEILFVTDVY-QEATAAKAAGLEVV-ISIRPGNGPL-PENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~-~Di~~A~~aG~~~i-~v~~~~~~~~-~~~~~~~~i~~l~eL  526 (526)
                      ++|+||||++ +|+.+|+++||+++ ++++.+.... ....++++|+++.||
T Consensus       182 ~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL  233 (247)
T d2gfha1         182 GDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL  233 (247)
T ss_dssp             GGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGH
T ss_pred             HhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHH
Confidence            9999999998 79999999999855 5555443332 333458999999875

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.93  E-value=2.8e-25  Score=212.69  Aligned_cols=121  Identities=21%  Similarity=0.242  Sum_probs=106.2

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ...++|++.++|++|+  +++++++||++...+...++++   ++.++||.++  ++.+..||+|++|.++++++|++ |
T Consensus        91 ~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~---~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~-p  164 (245)
T d1qq5a_          91 RLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANA---GLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVT-P  164 (245)
T ss_dssp             SCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCC-G
T ss_pred             ccccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhc---ccccccccccccccccccCccHHHHHHHHHHhCCC-h
Confidence            4578999999999996  5799999999999999999999   9999999998  55788899999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCCCC------------------------CCCCCCCCCeEecCCCCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRPGN------------------------GPLPENHGFKTINSFAEI  526 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~------------------------~~~~~~~~~~~i~~l~eL  526 (526)
                      ++|+||||+..||.+|+++||++|||+|++.                        .......+|++|+|+.||
T Consensus       165 ~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el  237 (245)
T d1qq5a_         165 AEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDL  237 (245)
T ss_dssp             GGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGH
T ss_pred             hhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECCHHHH
Confidence            9999999999999999999999999987531                        122233468999999875

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.92  E-value=3.9e-25  Score=207.03  Aligned_cols=122  Identities=12%  Similarity=0.216  Sum_probs=107.6

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE  479 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~  479 (526)
                      ...++||+.++|+.|+.+ ++++++||++....+.+++++   |+..+||.++......||+|++|..+++++|++ |++
T Consensus        82 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~---gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~-~~~  156 (210)
T d2ah5a1          82 EAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQDMAKNL---EIHHFFDGIYGSSPEAPHKADVIHQALQTHQLA-PEQ  156 (210)
T ss_dssp             SCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHHHHHHHT---TCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCC-GGG
T ss_pred             cccchhHHHHHHhhhhcc-cchhhcccccchhhhHHHHhh---cccccccccccccccccccccccchhhhhhhcc-ccc
Confidence            457999999999999976 589999999999999999999   999999999955556799999999999999997 999


Q ss_pred             EEEEecCHhhHHHHHHcCCcEEEEeCC-CCCCCC-CCCCCeEecCCCCC
Q 009774          480 ILFVTDVYQEATAAKAAGLEVVISIRP-GNGPLP-ENHGFKTINSFAEI  526 (526)
Q Consensus       480 ~l~VgDs~~Di~~A~~aG~~~i~v~~~-~~~~~~-~~~~~~~i~~l~eL  526 (526)
                      |+||||+.+|+.+|+++||++|+|.+| +..+.. ...++++++|+.||
T Consensus       157 ~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el  205 (210)
T d2ah5a1         157 AIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEV  205 (210)
T ss_dssp             EEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHH
T ss_pred             ceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHH
Confidence            999999999999999999999999987 333332 23458999999875

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.92  E-value=3.3e-25  Score=209.29  Aligned_cols=101  Identities=19%  Similarity=0.289  Sum_probs=93.3

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP  477 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p  477 (526)
                      ..+++||+.++|+.|+++|++++++||+..  ....++.+   ++.++|+.++  ++.+.+||+|++|+++++++|++ |
T Consensus        89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~---~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~-~  162 (221)
T d1o08a_          89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERM---NLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVA-P  162 (221)
T ss_dssp             GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHT---TCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTTCC-G
T ss_pred             cccccCCceeccccccccccceEEEeecch--hhHHHHhh---ccccccccccccccccccccChHHHHHHHHHcCCC-C
Confidence            457999999999999999999999999864  46788988   9999999988  45778999999999999999997 9


Q ss_pred             CcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          478 SEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      ++||||||+..|+++|+++||.+|+|.++
T Consensus       163 ~~~l~VgD~~~di~~A~~aG~~~i~v~~~  191 (221)
T d1o08a_         163 SESIGLEDSQAGIQAIKDSGALPIGVGRP  191 (221)
T ss_dssp             GGEEEEESSHHHHHHHHHHTCEEEEESCH
T ss_pred             ceEEEEecCHHHHHHHHHcCCEEEEECCh
Confidence            99999999999999999999999999886

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.91  E-value=6.4e-24  Score=195.81  Aligned_cols=102  Identities=17%  Similarity=0.248  Sum_probs=91.9

Q ss_pred             cccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCC
Q 009774          398 ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVD  475 (526)
Q Consensus       398 ~~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~  475 (526)
                      .....++||+.++|+.|+++|++++|+||++....+ .++++   ++.++||.++  ++....||+|++|+.++++++++
T Consensus        75 ~~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~~-~l~~~---~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~  150 (187)
T d2fi1a1          75 LEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLE-ILEKT---SIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS  150 (187)
T ss_dssp             TTSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHT---TCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS
T ss_pred             hhcCcccchhHHHHHHHHhhhccccccccCccchhh-hhhhh---ccccccccccccccccccCCCHHHHHHHHHHcCCC
Confidence            345689999999999999999999999999876654 68899   9999999999  45778999999999999999886


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          476 KPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       476 ~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                         +|+||||+..|+.+|+++|+++|+++++
T Consensus       151 ---~~l~vgDs~~Di~aA~~aG~~~i~v~~~  178 (187)
T d2fi1a1         151 ---SGLVIGDRPIDIEAGQAAGLDTHLFTSI  178 (187)
T ss_dssp             ---SEEEEESSHHHHHHHHHTTCEEEECSCH
T ss_pred             ---CeEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence               4999999999999999999999999864

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.91  E-value=2.4e-24  Score=204.53  Aligned_cols=123  Identities=14%  Similarity=0.134  Sum_probs=107.3

Q ss_pred             cCccCCCHHHHHHHHHHCC-CeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHc---C
Q 009774          400 EGEVFDDVPEALEKWHSLG-TKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSL---G  473 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G-~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l---~  473 (526)
                      ...++||+.++|+.|+++| ++++|+||++...+...++.+   |+.++||.++  ++....||.|.++...++.+   +
T Consensus        89 ~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~---gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~  165 (228)
T d2hcfa1          89 DITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLP---GIDHYFPFGAFADDALDRNELPHIALERARRMTGAN  165 (228)
T ss_dssp             GEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTT---TCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCC
T ss_pred             CceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhh---cccccccccccccccccccchhHHHHHHhhhhcccC
Confidence            3479999999999999987 899999999999999999999   9999999988  55778899999988877776   8


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCC-CCCCCC-CCCCeEecCCCCC
Q 009774          474 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG-NGPLPE-NHGFKTINSFAEI  526 (526)
Q Consensus       474 ~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~-~~~~~~-~~~~~~i~~l~eL  526 (526)
                      ++ |++|+||||+++|+.+|+++||.+|+|.++. +...+. ..++++++|+.||
T Consensus       166 ~~-p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el  219 (228)
T d2hcfa1         166 YS-PSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAET  219 (228)
T ss_dssp             CC-GGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCH
T ss_pred             CC-hhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHHH
Confidence            87 9999999999999999999999999999873 333222 2359999999885

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.90  E-value=1e-23  Score=198.99  Aligned_cols=120  Identities=18%  Similarity=0.272  Sum_probs=102.1

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE---eC--CcCCCCCHHHHHHHHHHcCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF---DT--AVGNKRETPSYVEITNSLGV  474 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~---~~--~~~~KP~p~~~~~~~~~l~~  474 (526)
                      ...++||+.++|++|+.   +.+++||+....+...++++   ++.++|+.++   +.  ....||+|++|+++++++|+
T Consensus        83 ~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~  156 (222)
T d2fdra1          83 DVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKV---GLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGV  156 (222)
T ss_dssp             HCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHT---TCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTC
T ss_pred             ccchhhhHHHHhhhccc---cceeeeecchhhhhhhhccc---ccccccceeecccccccccccccCHHHHHHHHHhhCC
Confidence            35799999999999875   56899999999999999999   9999999765   22  45689999999999999999


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCC------CCCCCeEecCCCCC
Q 009774          475 DKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLP------ENHGFKTINSFAEI  526 (526)
Q Consensus       475 ~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~------~~~~~~~i~~l~eL  526 (526)
                      + |++|+||||+..|+.+|+++||.+|++.++......      +..++.+|+|+.||
T Consensus       157 ~-p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL  213 (222)
T d2fdra1         157 S-PDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDL  213 (222)
T ss_dssp             C-GGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGH
T ss_pred             C-CceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHH
Confidence            7 999999999999999999999999999988432211      11258999999875

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.2e-22  Score=188.50  Aligned_cols=103  Identities=16%  Similarity=0.132  Sum_probs=90.0

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHH----HHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRL----AQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLG  473 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~----~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~  473 (526)
                      ...++|++.++|+.|+++|++++++||....    ..+......   ++.++||.++  ++....||+|++|+++++++|
T Consensus        97 ~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~---~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~  173 (225)
T d1zd3a1          97 ARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC---ELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLK  173 (225)
T ss_dssp             HCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH---HHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHT
T ss_pred             cCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhc---ChHhhccEEEeccccccchhHHHHHHHHhhhcc
Confidence            3468999999999999999999999997544    233344455   7889999998  457888999999999999999


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          474 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       474 ~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      ++ |++|+||||+..|+.+|+++||++|+++++
T Consensus       174 ~~-p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~  205 (225)
T d1zd3a1         174 AS-PSEVVFLDDIGANLKPARDLGMVTILVQDT  205 (225)
T ss_dssp             CC-GGGEEEEESCHHHHHHHHHTTCEEEECSSH
T ss_pred             cC-ccceeEEecCHHHHHHHHHcCCEEEEECCc
Confidence            97 999999999999999999999999999875

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=4.4e-22  Score=179.70  Aligned_cols=101  Identities=20%  Similarity=0.240  Sum_probs=90.4

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchH-HHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSR-LAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~-~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      .+.+|||+.++|+.|+++|++++|+||++. ...+..++.+   ++..+|+.+.   ...||+|++|..+++++|++ |+
T Consensus        44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~---~~~~~~~~~~---~~~kp~~~~~~~~~~~~~~~-~~  116 (164)
T d1u7pa_          44 NIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELF---DLGKYFIQRE---IYPGSKVTHFERLHHKTGVP-FS  116 (164)
T ss_dssp             EECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHT---TCGGGCSEEE---ESSSCHHHHHHHHHHHHCCC-GG
T ss_pred             ccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcc---cccccceeee---cccCCChHHHHHHHHHhCCC-hH
Confidence            347999999999999999999999998765 4566678888   8888888775   45799999999999999997 99


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEEEEeCCC
Q 009774          479 EILFVTDVYQEATAAKAAGLEVVISIRPG  507 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i~v~~~~  507 (526)
                      +|+||||+..|+++|+++||.+|+|.+|-
T Consensus       117 ~~l~igD~~~di~aA~~aG~~~i~v~~G~  145 (164)
T d1u7pa_         117 QMVFFDDENRNIIDVGRLGVTCIHIRDGM  145 (164)
T ss_dssp             GEEEEESCHHHHHHHHTTTCEEEECSSCC
T ss_pred             HEEEEcCCHHHHHHHHHcCCEEEEECCCC
Confidence            99999999999999999999999998873

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=2.2e-22  Score=189.24  Aligned_cols=104  Identities=14%  Similarity=0.144  Sum_probs=92.4

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCch----HHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGS----RLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLG  473 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~----~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~  473 (526)
                      ...++|++.++|+.|+++|++++++||+.    ....+..+...   ++.++||.++  +.....||+|++|+.++++++
T Consensus        95 ~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~---~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~  171 (222)
T d1cr6a1          95 ARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMC---ELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLK  171 (222)
T ss_dssp             TCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHH---HHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHT
T ss_pred             cCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhc---ChHhhhceeeehhhccCCCCChHHHHHHHHHhC
Confidence            35799999999999999999999999853    33455566777   8999999998  457788999999999999999


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCC
Q 009774          474 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG  507 (526)
Q Consensus       474 ~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~  507 (526)
                      ++ |++|+||||+..|+++|+++||++|+|.++.
T Consensus       172 v~-p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~  204 (222)
T d1cr6a1         172 AK-PNEVVFLDDFGSNLKPARDMGMVTILVHNTA  204 (222)
T ss_dssp             SC-TTSEEEEESSSTTTHHHHHHTCEEEECCSSS
T ss_pred             CC-cceEEEEECCHHHHHHHHHcCCEEEEECCcc
Confidence            97 9999999999999999999999999998763

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=4.7e-21  Score=175.08  Aligned_cols=104  Identities=17%  Similarity=0.253  Sum_probs=93.2

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      ..+++++.+++..++.+|++++++||++.......+..+.  ++.++|+.++  +..+..||+|++|+.+++++|++ |+
T Consensus        83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~--~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~-~~  159 (197)
T d2b0ca1          83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYP--EIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFS-PS  159 (197)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCH--HHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCC-GG
T ss_pred             cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcc--cchhhccceeecccccccccchHHHHHHHHhcCCC-CC
Confidence            4689999999999999999999999998877666666542  7889999998  45788899999999999999997 99


Q ss_pred             cEEEEecCHhhHHHHHHcCCcEEEEeCCC
Q 009774          479 EILFVTDVYQEATAAKAAGLEVVISIRPG  507 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~~~i~v~~~~  507 (526)
                      +|+||||+..|+++|+++||++|+++++.
T Consensus       160 ~~l~vgDs~~di~~A~~aG~~ti~v~~~~  188 (197)
T d2b0ca1         160 DTVFFDDNADNIEGANQLGITSILVKDKT  188 (197)
T ss_dssp             GEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred             eEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence            99999999999999999999999998763

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=2.1e-20  Score=167.77  Aligned_cols=99  Identities=14%  Similarity=0.120  Sum_probs=77.4

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCch--------H-------HHHHHHHhhcCCCCcccccceEE-------eCCcCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGS--------R-------LAQRLIFGNSNYGDLRKYLSGFF-------DTAVGNK  459 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~--------~-------~~~~~~l~~l~~~gl~~~fd~i~-------~~~~~~K  459 (526)
                      .++||+.++|+.|+++|++++++||.+        .       ......++..   ++.  ++.++       +....+|
T Consensus        30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~---~~~--~~~i~~~~~~~~~~~~~~K  104 (161)
T d2fpwa1          30 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQ---GVQ--FDEVLICPHLPADECDCRK  104 (161)
T ss_dssp             CBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHT---TCC--EEEEEEECCCGGGCCSSST
T ss_pred             eECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhcccc---ccc--cceeeeccccccccccccc
Confidence            589999999999999999999999975        1       1233344444   443  33333       2356679


Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      |+|.+|++++++++++ |++|+||||+..|+.+|+++||++|+++++
T Consensus       105 P~p~~~~~~~~~~~id-~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~  150 (161)
T d2fpwa1         105 PKVKLVERYLAEQAMD-RANSYVIGDRATDIQLAENMGINGLRYDRE  150 (161)
T ss_dssp             TSSGGGGGGC----CC-GGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred             cccHHHHHHHHhcCCC-hhcEEEECCCHHHHHHHHHcCCeEEEECCC
Confidence            9999999999999998 999999999999999999999999999775

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=2e-19  Score=164.90  Aligned_cols=119  Identities=22%  Similarity=0.285  Sum_probs=88.0

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHH---------------HHHHHhhcCCCCcccccceEE--------------
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLA---------------QRLIFGNSNYGDLRKYLSGFF--------------  452 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~---------------~~~~l~~l~~~gl~~~fd~i~--------------  452 (526)
                      +++||+.++|+.|+++|++++++||.+...               ....+...   ++  .++.++              
T Consensus        27 ~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~cp~~p~~~~~~~~  101 (182)
T d2gmwa1          27 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADR---DV--DLDGIYYCPHHPQGSVEEFR  101 (182)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHT---TC--CCSEEEEECCBTTCSSGGGB
T ss_pred             eECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhh---cc--cccceeeccccccccccccc
Confidence            589999999999999999999999987421               11122222   22  122222              


Q ss_pred             eCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcE-EEEeCCCCC-CCCCCCCCeEecCCCCC
Q 009774          453 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV-VISIRPGNG-PLPENHGFKTINSFAEI  526 (526)
Q Consensus       453 ~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~-i~v~~~~~~-~~~~~~~~~~i~~l~eL  526 (526)
                      ..+..+||+|.+++.++++++++ |++|+||||+.+|+++|++||+.+ +++.++... ...+..++++++++.||
T Consensus       102 ~~~~~rKP~p~m~~~~~~~~~i~-~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl  176 (182)
T d2gmwa1         102 QVCDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADL  176 (182)
T ss_dssp             SCCSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGH
T ss_pred             ccccccCCccccccchhhhcccc-cccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHH
Confidence            12456799999999999999998 999999999999999999999976 555555322 22223358999999874

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.74  E-value=2.2e-18  Score=161.21  Aligned_cols=100  Identities=17%  Similarity=0.140  Sum_probs=79.6

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchH------------HH---HHHHHhhcCCCCcccccceEE-e------------
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSR------------LA---QRLIFGNSNYGDLRKYLSGFF-D------------  453 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~------------~~---~~~~l~~l~~~gl~~~fd~i~-~------------  453 (526)
                      +++||+.++|++|+++||+++|+||.+.            ..   +...++..   |+  +++.++ +            
T Consensus        48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~---g~--~~~~~~~~~~~~~~~~~~~~  122 (209)
T d2o2xa1          48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREE---GV--FVDMVLACAYHEAGVGPLAI  122 (209)
T ss_dssp             CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHT---TC--CCSEEEEECCCTTCCSTTCC
T ss_pred             EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhc---cc--ccceEEEecccccccccccc
Confidence            5899999999999999999999999652            11   22223333   32  234443 1            


Q ss_pred             -CCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCC
Q 009774          454 -TAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG  507 (526)
Q Consensus       454 -~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~  507 (526)
                       ++..+||+|.++.+++++++++ |++|+||||+.+|+++|++|||.++++.++.
T Consensus       123 ~~~~~rKP~p~ml~~a~~~~~i~-~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~  176 (209)
T d2o2xa1         123 PDHPMRKPNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQGWLVDGE  176 (209)
T ss_dssp             SSCTTSTTSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSEEEEETCC
T ss_pred             cccccccccchhhhHhHHHhCCC-ccceEEeCCCHHHHHHHHHCCCcEEEEeCCC
Confidence             1234699999999999999998 9999999999999999999999999998873

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=99.74  E-value=4.3e-18  Score=163.71  Aligned_cols=69  Identities=20%  Similarity=0.099  Sum_probs=59.5

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCCcEEEEecCH-hhHHHHHHcCCcEEEEeCC-CCCCCCC---CCCCeEecCCCCC
Q 009774          457 GNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRP-GNGPLPE---NHGFKTINSFAEI  526 (526)
Q Consensus       457 ~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~-~~~~~~~---~~~~~~i~~l~eL  526 (526)
                      ..||+|.+|..+++++|++ |++|+||||++ +||.+|+++||++|+|.+| ......+   ..+|++++|+.||
T Consensus       174 ~~KP~p~~~~~a~~~lgi~-p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL  247 (250)
T d2c4na1         174 VGKPSPWIIRAALNKMQAH-SEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI  247 (250)
T ss_dssp             CSTTSTHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred             cccchhhhHhhhhhhhcCC-chheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHh
Confidence            4699999999999999997 99999999998 5999999999999999988 3333332   2359999999986

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=99.67  E-value=3.1e-17  Score=158.44  Aligned_cols=69  Identities=16%  Similarity=0.204  Sum_probs=58.6

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCCcEEEEecCH-hhHHHHHHcCCcEEEEeCCCCC-CC---CCCCCCeEecCCCCC
Q 009774          457 GNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRPGNG-PL---PENHGFKTINSFAEI  526 (526)
Q Consensus       457 ~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~-~~---~~~~~~~~i~~l~eL  526 (526)
                      ..||+|.+|..+++++|++ |++|+||||++ +||.+|+++||++|||.+|... ..   .+..+|++++|+.||
T Consensus       183 ~~KP~p~~~~~a~~~l~~~-~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL  256 (261)
T d1vjra_         183 AGKPNPLVVDVISEKFGVP-KERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGEL  256 (261)
T ss_dssp             CSTTSTHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHH
T ss_pred             cCCCcHHHHHHHHhhhccC-chhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHH
Confidence            3699999999999999997 99999999997 6999999999999999888332 21   233459999998875

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.66  E-value=2.5e-16  Score=148.04  Aligned_cols=94  Identities=14%  Similarity=0.137  Sum_probs=81.7

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccce---EEe------------CCcCCCCCHHHH
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSG---FFD------------TAVGNKRETPSY  465 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~---i~~------------~~~~~KP~p~~~  465 (526)
                      ++++||+.++|+.|+++|++++++||+....++.+++++   ++.++|..   .++            .....||+|...
T Consensus        74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l---~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  150 (226)
T d2feaa1          74 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGI---VEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCK  150 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTT---SCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCH
T ss_pred             cchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHc---CCccceeeeeEEEeCCcceeccccccccccccCCHHHH
Confidence            469999999999999999999999999999999999999   88777743   111            122357788889


Q ss_pred             HHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCC
Q 009774          466 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGL  498 (526)
Q Consensus       466 ~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~  498 (526)
                      ..++++++++ +++|+|||||.+|+.+|++||+
T Consensus       151 ~~~~~~~~~~-~~~~i~iGDs~~Dl~~a~~A~~  182 (226)
T d2feaa1         151 PSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDL  182 (226)
T ss_dssp             HHHHHHHCCT-TCEEEEEECCGGGHHHHHTCSE
T ss_pred             HHHHHHhcCC-CceEEEEeCchhhHHHHHHCCE
Confidence            9999999997 9999999999999999999996

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=99.65  E-value=3.7e-17  Score=157.39  Aligned_cols=119  Identities=16%  Similarity=0.042  Sum_probs=77.5

Q ss_pred             HHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 009774          407 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSEILFVT  484 (526)
Q Consensus       407 v~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~Vg  484 (526)
                      ....+..+..++.+..|+||...............+.+...+....  +....+||+|++|.++++++|++ |++|+|||
T Consensus       126 ~~~~~~~~~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gKP~p~~~~~al~~l~i~-~~~~~mIG  204 (253)
T d1wvia_         126 EKLTLATLAIQKGAVFIGTNPDLNIPTERGLLPGAGAILFLLEKATRVKPIIIGKPEAVIMNKALDRLGVK-RHEAIMVG  204 (253)
T ss_dssp             HHHHHHHHHHHTTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHHHTSC-GGGEEEEE
T ss_pred             HHHHHHhhhhhhccccccCCCCceeEcCCcccccCCcchhcccccccceeEEeccCCcccceehhhhcccc-ccceEEEc
Confidence            3344444555566788999975422111000010000111111111  12334599999999999999997 99999999


Q ss_pred             cCH-hhHHHHHHcCCcEEEEeCC-CCCCCC---CCCCCeEecCCCCC
Q 009774          485 DVY-QEATAAKAAGLEVVISIRP-GNGPLP---ENHGFKTINSFAEI  526 (526)
Q Consensus       485 Ds~-~Di~~A~~aG~~~i~v~~~-~~~~~~---~~~~~~~i~~l~eL  526 (526)
                      |++ +||.+|+++||++|+|.+| .+....   ...||++++|+.|+
T Consensus       205 Ds~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~  251 (253)
T d1wvia_         205 DNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEW  251 (253)
T ss_dssp             SCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred             CChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHc
Confidence            998 5999999999999999987 333322   22359999999986

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.61  E-value=2.2e-16  Score=151.67  Aligned_cols=71  Identities=14%  Similarity=0.190  Sum_probs=60.1

Q ss_pred             CcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCH-hhHHHHHHcCCcEEEEeCC-CCCC---CCCCCCCeEecCCCCC
Q 009774          455 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRP-GNGP---LPENHGFKTINSFAEI  526 (526)
Q Consensus       455 ~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~-~~~~---~~~~~~~~~i~~l~eL  526 (526)
                      ....||+|.+|.++++++|++ |++|+||||++ +||.+|+++||++|+|.+| ....   .....||++++|+.|+
T Consensus       176 ~~~~KP~~~~~~~~~~~~gi~-~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~  251 (253)
T d1yv9a1         176 VYIGKPKAIIMERAIAHLGVE-KEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW  251 (253)
T ss_dssp             EECSTTSHHHHHHHHHHHCSC-GGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred             eeecccchhHHHHHHHHhCCC-ccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHc
Confidence            456899999999999999997 99999999998 6999999999999999887 2222   2223359999999986

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.2e-15  Score=143.38  Aligned_cols=117  Identities=13%  Similarity=0.108  Sum_probs=81.8

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccc--cceEE--e-C---CcCCCC--------CHHH
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY--LSGFF--D-T---AVGNKR--------ETPS  464 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~--fd~i~--~-~---~~~~KP--------~p~~  464 (526)
                      ..++||+.++++.|+++|++++|+|++....++.+++.+   |+..+  |..-+  + +   .+..++        +...
T Consensus        81 ~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~l---gi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~  157 (217)
T d1nnla_          81 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKL---NIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKV  157 (217)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT---TCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHH
T ss_pred             cccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHh---CCcccceeeeeeeeeehhccccceeeeeeeccchHHHH
Confidence            468999999999999999999999999999999999999   88643  11111  1 1   011122        2234


Q ss_pred             HHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCC--CCCCCeEecCCCCC
Q 009774          465 YVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLP--ENHGFKTINSFAEI  526 (526)
Q Consensus       465 ~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~--~~~~~~~i~~l~eL  526 (526)
                      ...++++  .+ +++|++|||+.+|+.+++.+|+.+ .+.  ++....  ...++..|+||.||
T Consensus       158 v~~~~~~--~~-~~~~~~vGDs~~Di~~~~~ag~~v-a~~--~~~~~~~~~~~ad~~i~~f~el  215 (217)
T d1nnla_         158 IKLLKEK--FH-FKKIIMIGDGATDMEACPPADAFI-GFG--GNVIRQQVKDNAKWYITDFVEL  215 (217)
T ss_dssp             HHHHHHH--HC-CSCEEEEESSHHHHTTTTTSSEEE-EEC--SSCCCHHHHHHCSEEESCGGGG
T ss_pred             HHHHHhc--cC-ccccEEEEeCHhhHHHHHhCCceE-EEC--CCHHHHHHHHhCCCEeCCHHHh
Confidence            4444443  54 679999999999999999999753 333  222111  12247889999886

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.52  E-value=6.5e-15  Score=129.33  Aligned_cols=104  Identities=13%  Similarity=-0.003  Sum_probs=75.3

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHH---HHHHhhcCC--CC-cccccceEE-eCCcCCCCCHHHHHHHHHHcCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQ---RLIFGNSNY--GD-LRKYLSGFF-DTAVGNKRETPSYVEITNSLGV  474 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~---~~~l~~l~~--~g-l~~~fd~i~-~~~~~~KP~p~~~~~~~~~l~~  474 (526)
                      .++|++.++|+.|+++|++++++||.+....   ...++....  .. ....++..+ ......+|++.....++.++..
T Consensus        36 ~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~~~  115 (149)
T d1ltqa1          36 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIA  115 (149)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHHTT
T ss_pred             ccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHhcc
Confidence            5899999999999999999999999863211   111211100  00 112334444 3455667888888889988888


Q ss_pred             CCCCc-EEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          475 DKPSE-ILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       475 ~~p~~-~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                      + +.+ +++|||++.|+++|+++|++++.|.+|
T Consensus       116 ~-~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G  147 (149)
T d1ltqa1         116 P-HFDVKLAIDDRTQVVEMWRRIGVECWQVASG  147 (149)
T ss_dssp             T-TCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred             C-CCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence            6 555 567899999999999999999999886

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.48  E-value=8.2e-14  Score=127.94  Aligned_cols=115  Identities=16%  Similarity=0.150  Sum_probs=91.6

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eC----------CcCCCCCHHHHHHH
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DT----------AVGNKRETPSYVEI  468 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~----------~~~~KP~p~~~~~~  468 (526)
                      ..+++++.+.++.++.+|+.++++|++.........+..   +...+|...+  +.          ....++.+......
T Consensus        74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (210)
T d1j97a_          74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKL---GLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKI  150 (210)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHH---TCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhcc---chhhhhhhhhccccccccccccccccccccccchhhhH
Confidence            468999999999999999999999999999988888888   6666666554  11          23457788999999


Q ss_pred             HHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCC
Q 009774          469 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSF  523 (526)
Q Consensus       469 ~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l  523 (526)
                      ++.++++ |+++++|||+.+|+.+++.||+..+ + .+  .+.....+++++++.
T Consensus       151 ~~~~~~~-~~~~i~iGDs~nDi~m~~~ag~~va-~-na--~~~lk~~Ad~vi~~~  200 (210)
T d1j97a_         151 AKIEGIN-LEDTVAVGDGANDISMFKKAGLKIA-F-CA--KPILKEKADICIEKR  200 (210)
T ss_dssp             HHHHTCC-GGGEEEEESSGGGHHHHHHCSEEEE-E-SC--CHHHHTTCSEEECSS
T ss_pred             HHHhccc-ccceEEecCCcChHHHHHHCCCCEE-E-CC--CHHHHHhCCEEEcCC
Confidence            9999997 9999999999999999999998654 3 22  122223457888753

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.46  E-value=1.9e-14  Score=146.41  Aligned_cols=122  Identities=18%  Similarity=0.185  Sum_probs=101.5

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccce--EE--e-----------CCcCCCCCHHHH
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSG--FF--D-----------TAVGNKRETPSY  465 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~--i~--~-----------~~~~~KP~p~~~  465 (526)
                      ++|+||+.++|+.|+++|++++++||.+...++.+++++   |+.++|+.  ++  +           .....||+|++|
T Consensus       214 i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~l---gl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~  290 (380)
T d1qyia_         214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENL---GLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSY  290 (380)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH---TCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHH
T ss_pred             ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCcccCCcceEEecchhhhhhhhccccccccCCChHHH
Confidence            356779999999999999999999999999999999999   99999985  22  1           135679999999


Q ss_pred             HHHHHHc--------------CCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCC----CC-CCCCCeEecCCCCC
Q 009774          466 VEITNSL--------------GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGP----LP-ENHGFKTINSFAEI  526 (526)
Q Consensus       466 ~~~~~~l--------------~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~----~~-~~~~~~~i~~l~eL  526 (526)
                      ..++..+              +++ |++|+||||+.+|+.+|+++|+.+|+|.+|....    .. +..+|++++|+.||
T Consensus       291 ~~~~~~~~~~~~~k~~iv~~~~~~-~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el  369 (380)
T d1qyia_         291 IAALYGNNRDKYESYINKQDNIVN-KDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGEL  369 (380)
T ss_dssp             HHHHHCCCGGGHHHHHHCCTTCSC-TTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGH
T ss_pred             HHHHHHcCCCHHHHHHHHHHhCCC-CCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHH
Confidence            9998655              465 8999999999999999999999999999873221    11 12459999998874

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.14  E-value=8e-11  Score=107.15  Aligned_cols=93  Identities=13%  Similarity=0.264  Sum_probs=73.9

Q ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCchH--------H----HHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHH
Q 009774          403 VFDDVPEALEKWHSLGTKVYIYSSGSR--------L----AQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEI  468 (526)
Q Consensus       403 l~pgv~~~L~~L~~~G~~l~vvTn~~~--------~----~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~  468 (526)
                      ++|++.+.|+.|+++||.++|+||.+.        +    ..+.+++.+   +..  ++.++  .....+||.|.++..+
T Consensus        51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l---~~~--~~i~~~~~~~~~RKP~~GM~~~~  125 (195)
T d1yj5a1          51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKL---GVP--FQVLVATHAGLNRKPVSGMWDHL  125 (195)
T ss_dssp             SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHH---TSC--CEEEEECSSSSSSTTSTHHHHHH
T ss_pred             ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHc---CCC--ccEEEecCccccCCCccHHHHHH
Confidence            579999999999999999999999852        2    234455555   432  23333  3466789999999999


Q ss_pred             HHHcC----CCCCCcEEEEecCH-----------------hhHHHHHHcCCcEE
Q 009774          469 TNSLG----VDKPSEILFVTDVY-----------------QEATAAKAAGLEVV  501 (526)
Q Consensus       469 ~~~l~----~~~p~~~l~VgDs~-----------------~Di~~A~~aG~~~i  501 (526)
                      +++.+    ++ .++++||||..                 +|++.|.++|++..
T Consensus       126 ~~~~n~~~~id-~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~  178 (195)
T d1yj5a1         126 QEQANEGIPIS-VEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA  178 (195)
T ss_dssp             HHTSSSSCCCC-GGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred             HHHhcccccCC-cCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence            99975    76 89999999954                 89999999999965

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.87  E-value=7.8e-09  Score=93.58  Aligned_cols=98  Identities=11%  Similarity=0.034  Sum_probs=76.7

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eC----CcCCCCCHHHHHHHHHHcC
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DT----AVGNKRETPSYVEITNSLG  473 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~----~~~~KP~p~~~~~~~~~l~  473 (526)
                      ....+++....+..++ .+++.+++|.+...........+   +...++...+  ..    .....+.+......++.++
T Consensus        67 ~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (206)
T d1rkua_          67 TLKPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQL---GFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFK  142 (206)
T ss_dssp             TCCCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHT---TCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHH
T ss_pred             hccccchHHHHHHHhh-cCceEEEeccCchHHHHHHHHHh---CCchhhcceeeeecccccccccccchhhHHHHHHHhc
Confidence            3467889988888776 57999999999999888888888   6655555444  11    1223444556678899999


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774          474 VDKPSEILFVTDVYQEATAAKAAGLEVVI  502 (526)
Q Consensus       474 ~~~p~~~l~VgDs~~Di~~A~~aG~~~i~  502 (526)
                      ++ +++|++|||+.+|+...+.||+....
T Consensus       143 i~-~~eviaiGDg~NDi~Ml~~Ag~gIAm  170 (206)
T d1rkua_         143 SL-YYRVIAAGDSYNDTTMLSEAHAGILF  170 (206)
T ss_dssp             HT-TCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred             cc-ccceEEecCCccCHHHHHhCCccEEE
Confidence            97 99999999999999999999997665

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=98.78  E-value=1.3e-08  Score=93.76  Aligned_cols=44  Identities=20%  Similarity=0.237  Sum_probs=40.2

Q ss_pred             CcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCc
Q 009774          455 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLE  499 (526)
Q Consensus       455 ~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~  499 (526)
                      .....+++..++.++++++++ |+++++|||+.+|+...+.+|..
T Consensus       147 ~~~~~~K~~al~~l~~~~~i~-~~~~~~iGD~~NDi~ml~~ag~~  190 (230)
T d1wr8a_         147 KKPWINKGSGIEKASEFLGIK-PKEVAHVGDGENDLDAFKVVGYK  190 (230)
T ss_dssp             ECTTCCHHHHHHHHHHHHTSC-GGGEEEEECSGGGHHHHHHSSEE
T ss_pred             eeCCcCcchhhcccccccccc-hhheeeeecCccHHHHHHHCCeE
Confidence            456678899999999999997 99999999999999999999974

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=98.76  E-value=1.9e-08  Score=91.47  Aligned_cols=94  Identities=12%  Similarity=0.119  Sum_probs=66.5

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHH---HHHHHH-hhcCCCCcc--cccceEEeCCcCCCCCHHHHHHHHHHcCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIF-GNSNYGDLR--KYLSGFFDTAVGNKRETPSYVEITNSLGVD  475 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~---~~~~~l-~~l~~~gl~--~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~  475 (526)
                      .+.||+.++|+.++++|++++.|||....   ....-| +.+   |+.  +.-+.++......|..   -+..++++++ 
T Consensus        86 ~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~l---G~p~~~~~~vll~~~~~~K~~---rr~~Ik~y~I-  158 (209)
T d2b82a1          86 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNF---HIPATNMNPVIFAGDKPGQNT---KSQWLQDKNI-  158 (209)
T ss_dssp             EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHT---TCCTTTBCCCEECCCCTTCCC---SHHHHHHTTE-
T ss_pred             CcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHc---CCCcccccceEeeCCCCCchH---HHHHHHHcCe-
Confidence            57899999999999999999999997643   222333 446   553  2233344222223333   2344467776 


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774          476 KPSEILFVTDVYQEATAAKAAGLEVVISIRP  506 (526)
Q Consensus       476 ~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~  506 (526)
                          .+++||+.+|+.+|+++|+++|-+.+.
T Consensus       159 ----~l~~GD~l~Df~aA~eagi~~iRi~r~  185 (209)
T d2b82a1         159 ----RIFYGDSDNDITAARDVGARGIRILRA  185 (209)
T ss_dssp             ----EEEEESSHHHHHHHHHTTCEEEECCCC
T ss_pred             ----EEEecCCHHHHhHHHHcCCCceEeecc
Confidence                589999999999999999999999776

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.60  E-value=4.8e-08  Score=90.42  Aligned_cols=40  Identities=10%  Similarity=0.116  Sum_probs=35.5

Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 009774          460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV  500 (526)
Q Consensus       460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~  500 (526)
                      .+....+.+++++|++ +++|++|||+.+|+.....+|...
T Consensus       151 ~K~~ai~~l~~~~~i~-~~~v~~~GDs~nD~~m~~~a~~~v  190 (225)
T d1l6ra_         151 DKAFAVNKLKEMYSLE-YDEILVIGDSNNDMPMFQLPVRKA  190 (225)
T ss_dssp             SHHHHHHHHHHHTTCC-GGGEEEECCSGGGHHHHTSSSEEE
T ss_pred             chHHHHHHHhhhhccc-hhheeeecCCcchHHHHHHCCeEE
Confidence            3467788899999997 999999999999999999999643

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=98.40  E-value=1.9e-06  Score=86.89  Aligned_cols=105  Identities=15%  Similarity=0.162  Sum_probs=80.3

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcC------CCCcccccceEE-eCC------------------
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN------YGDLRKYLSGFF-DTA------------------  455 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~------~~gl~~~fd~i~-~~~------------------  455 (526)
                      +..-|.+..+|++||++|.++.++||++-.+.+..++.+-      ...+.++||.|+ +..                  
T Consensus       184 v~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~  263 (458)
T d2bdea1         184 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN  263 (458)
T ss_dssp             EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTT
T ss_pred             hcCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCC
Confidence            3456889999999999999999999999999888888763      347889999987 210                  


Q ss_pred             c-------CCCCC---HHHHHHHHHHcCCCCCCcEEEEecCH-hhHHHHH-HcCCcEEEEeCC
Q 009774          456 V-------GNKRE---TPSYVEITNSLGVDKPSEILFVTDVY-QEATAAK-AAGLEVVISIRP  506 (526)
Q Consensus       456 ~-------~~KP~---p~~~~~~~~~l~~~~p~~~l~VgDs~-~Di~~A~-~aG~~~i~v~~~  506 (526)
                      +       ..||.   -.....+.+-+|.. ..++|||||+. .||...+ ..|++|+.|...
T Consensus       264 g~l~~~~~~~~~~vY~gGn~~~l~~llg~~-g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E  325 (458)
T d2bdea1         264 GTMTNVHGPIVPGVYQGGNAKKFTEDLGVG-GDEILYIGDHIYGDILRLKKDCNWRTALVVEE  325 (458)
T ss_dssp             CCEEECCSCCCSEEEEECCHHHHHHHTTCC-GGGEEEEESSCCSCHHHHHHHHCSEEEEECTT
T ss_pred             CccccCCccccCCccccCCHHHHHHHhCCC-CCcEEEECCccchhhhhhhhhcCCceEEehHH
Confidence            0       00110   11234577788997 89999999999 8977775 579999999865

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=98.38  E-value=1.2e-07  Score=84.79  Aligned_cols=81  Identities=15%  Similarity=0.257  Sum_probs=67.4

Q ss_pred             HHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhh
Q 009774          410 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE  489 (526)
Q Consensus       410 ~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~D  489 (526)
                      .++.|++.|+.++++|.......+...+.+   ++..    ++   ...+++...+..++++++++ +++|+||||..+|
T Consensus        40 gi~~l~~~gi~~~iis~~~~~~v~~~~~~l---~~~~----~~---~~~~~K~~~l~~~~~~~~i~-~~~v~~vGDd~nD  108 (177)
T d1k1ea_          40 GIKMLMDADIQVAVLSGRDSPILRRRIADL---GIKL----FF---LGKLEKETACFDLMKQAGVT-AEQTAYIGDDSVD  108 (177)
T ss_dssp             HHHHHHHTTCEEEEEESCCCHHHHHHHHHH---TCCE----EE---ESCSCHHHHHHHHHHHHTCC-GGGEEEEECSGGG
T ss_pred             HHHHHhhhcEEEEEecCCchhHHHHHHhhh---cccc----cc---cccccHHHHHHHHHHHhcCC-cceeEEecCCccH
Confidence            577888999999999999888888888887   5433    22   23466677889999999997 9999999999999


Q ss_pred             HHHHHHcCCcEE
Q 009774          490 ATAAKAAGLEVV  501 (526)
Q Consensus       490 i~~A~~aG~~~i  501 (526)
                      +..-+.+|+..+
T Consensus       109 l~~l~~~g~sia  120 (177)
T d1k1ea_         109 LPAFAACGTSFA  120 (177)
T ss_dssp             HHHHHHSSEEEE
T ss_pred             HHHHhhCCeEEE
Confidence            999999997554

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=98.33  E-value=6.7e-07  Score=84.51  Aligned_cols=39  Identities=23%  Similarity=0.423  Sum_probs=34.4

Q ss_pred             CHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 009774          461 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV  500 (526)
Q Consensus       461 ~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~  500 (526)
                      +-...+.+++.++++ ++++++|||+.+|+...+.+|...
T Consensus       198 K~~al~~l~~~~~i~-~~~ii~~GD~~ND~~ml~~~~~~~  236 (271)
T d1rkqa_         198 KGTGVKSLADVLGIK-PEEIMAIGDQENDIAMIEYAGVGV  236 (271)
T ss_dssp             HHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEE
T ss_pred             cccccceehhhcccc-hhcEEEEeCcHhHHHHHHhCCcEE
Confidence            346788899999997 999999999999999999999544

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.31  E-value=1.5e-06  Score=83.31  Aligned_cols=94  Identities=16%  Similarity=0.161  Sum_probs=64.2

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE------eCC---cC-CCCCH------H
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------DTA---VG-NKRET------P  463 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~------~~~---~~-~KP~p------~  463 (526)
                      .+.+.||+.++++.|+++|++++|+|++-...++.+++++   |+...=..++      +..   .. ..|-+      .
T Consensus       133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~l---g~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~  209 (291)
T d2bdua1         133 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQA---GVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHD  209 (291)
T ss_dssp             CCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHT---TCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHH
T ss_pred             CCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHc---CCCccCceEEeeEEEEeCCeeEeeccCCccccccCcc
Confidence            4579999999999999999999999999999999999999   6643111222      110   00 11111      2


Q ss_pred             HHHHHHH--HcCCCCCCcEEEEecCHhhHHHHHHcC
Q 009774          464 SYVEITN--SLGVDKPSEILFVTDVYQEATAAKAAG  497 (526)
Q Consensus       464 ~~~~~~~--~l~~~~p~~~l~VgDs~~Di~~A~~aG  497 (526)
                      .......  ...-. .+++++|||+.+|+.+|..+.
T Consensus       210 ~~~~~~~~~~~~~~-~~~vI~iGDs~~Dl~Ma~g~~  244 (291)
T d2bdua1         210 GALKNTDYFSQLKD-NSNIILLGDSQGDLRMADGVA  244 (291)
T ss_dssp             HHHTTHHHHHHTTT-CCEEEEEESSSGGGGTTTTCS
T ss_pred             hhhhhHHHHhccCC-cCcEEEEeCCHhHHHHHhCCc
Confidence            2222222  22223 578999999999999888764

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=98.30  E-value=1.4e-06  Score=82.90  Aligned_cols=39  Identities=21%  Similarity=0.258  Sum_probs=35.1

Q ss_pred             CHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 009774          461 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV  500 (526)
Q Consensus       461 ~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~  500 (526)
                      +-...+++++.+|++ ++++++|||+.+|+...+.+|...
T Consensus       214 K~~ai~~l~~~~gi~-~~~vi~~GD~~ND~~Ml~~a~~sv  252 (285)
T d1nrwa_         214 KGQALKRLAKQLNIP-LEETAAVGDSLNDKSMLEAAGKGV  252 (285)
T ss_dssp             HHHHHHHHHHHTTCC-GGGEEEEESSGGGHHHHHHSSEEE
T ss_pred             hhhHHHHHHhhcccC-cccEEEEeCCHHHHHHHHhCCeEE
Confidence            467789999999997 999999999999999999999544

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=5.3e-06  Score=74.70  Aligned_cols=107  Identities=20%  Similarity=0.113  Sum_probs=68.2

Q ss_pred             cCccCCCHHHHHHHHHHCC-CeEEEEeCchHH------HHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHc
Q 009774          400 EGEVFDDVPEALEKWHSLG-TKVYIYSSGSRL------AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSL  472 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G-~~l~vvTn~~~~------~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l  472 (526)
                      .++++||+.++|++|++.| +.+.++|..+..      .....+++.-  +-......++.   ..|            .
T Consensus        72 ~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~--~~~~~~~~~~t---~~K------------~  134 (195)
T d1q92a_          72 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYF--GPDFLEQIVLT---RDK------------T  134 (195)
T ss_dssp             TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHH--CGGGGGGEEEC---SCS------------T
T ss_pred             hCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhc--CCCCccEEEEc---ccc------------c
Confidence            4689999999999999864 568889987532      2223344430  11111122221   123            1


Q ss_pred             CCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774          473 GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI  526 (526)
Q Consensus       473 ~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  526 (526)
                      .+. .  -++|+|++..+....++|+.+|+.+.+.+...........+.+..|+
T Consensus       135 ~~~-~--d~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~~~~~~Rv~~W~e~  185 (195)
T d1q92a_         135 VVS-A--DLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADD  185 (195)
T ss_dssp             TSC-C--SEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSC
T ss_pred             eec-C--eEEecCcHHHHHHHhcCCCeEEEECCCcccCCCCCCCceeeCCHHHH
Confidence            232 2  28999999999999999999999988766543222235778877763

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=98.09  E-value=2.4e-06  Score=80.48  Aligned_cols=40  Identities=13%  Similarity=0.209  Sum_probs=35.9

Q ss_pred             CHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774          461 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       461 ~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                      +-...+.+++.+|++ ++++++|||+.+|+..-..+|...+
T Consensus       191 K~~al~~l~~~lgi~-~~~vi~~GD~~ND~~Ml~~ag~~va  230 (269)
T d1rlma_         191 KANGISRLLKRWDLS-PQNVVAIGDSGNDAEMLKMARYSFA  230 (269)
T ss_dssp             HHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHCSEEEE
T ss_pred             HHHHHHHHhhhhccc-cccEEEEcCCcchHHHHHhCCeEEE
Confidence            456788999999997 9999999999999999999987665

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=97.99  E-value=7.1e-06  Score=77.39  Aligned_cols=41  Identities=7%  Similarity=0.092  Sum_probs=35.4

Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774          460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV  501 (526)
Q Consensus       460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i  501 (526)
                      -+......+++.++++ ++++++|||+.+|+.....+|..++
T Consensus       207 ~K~~~l~~l~~~~~i~-~~~vi~~GD~~ND~~Ml~~a~~~va  247 (283)
T d2b30a1         207 DKYTGINYLLKHYNIS-NDQVLVVGDAENDIAMLSNFKYSFA  247 (283)
T ss_dssp             CHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHSCSEEEE
T ss_pred             hhHHHHHHHhhhcccc-cceEEEecCChhhHHHHHhCCcEEE
Confidence            4566788899999997 9999999999999999999996443

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.98  E-value=1.3e-05  Score=75.05  Aligned_cols=43  Identities=16%  Similarity=0.153  Sum_probs=37.0

Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEe
Q 009774          460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISI  504 (526)
Q Consensus       460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~  504 (526)
                      .+-...+.+++++|++ ++++++|||+.+|+..-+.+|.. +.+.
T Consensus       186 sK~~al~~l~~~~~i~-~~~~~a~GD~~ND~~Ml~~a~~s-vav~  228 (260)
T d2rbka1         186 TKQKGIDEIIRHFGIK-LEETMSFGDGGNDISMLRHAAIG-VAMG  228 (260)
T ss_dssp             SHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEE-EECT
T ss_pred             CHHHHHHHHHHhcccc-HhheeEecCCcccHHHHHhCCeE-EEeC
Confidence            3556789999999997 99999999999999999999984 4443

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.61  E-value=0.00021  Score=60.01  Aligned_cols=85  Identities=18%  Similarity=0.181  Sum_probs=67.7

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEE
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL  481 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l  481 (526)
                      ++.|++.+.++.|++.|+++.++|..+......+.+.+   |+..+|-.         -.|+--....+++.-  ...+.
T Consensus        21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~l---gI~~v~~~---------~~p~~k~~~v~~~q~--~~~v~   86 (135)
T d2b8ea1          21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL---NLDLVIAE---------VLPHQKSEEVKKLQA--KEVVA   86 (135)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH---TCSEEECS---------CCHHHHHHHHHHHTT--TSCEE
T ss_pred             CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhh---hhhhhccc---------cchhHHHHHHHHHHc--CCEEE
Confidence            58899999999999999999999999999999999999   87543221         123444455566655  35899


Q ss_pred             EEecCHhhHHHHHHcCCcE
Q 009774          482 FVTDVYQEATAAKAAGLEV  500 (526)
Q Consensus       482 ~VgDs~~Di~~A~~aG~~~  500 (526)
                      ||||..+|..+-+.+++..
T Consensus        87 ~vGDg~nD~~aL~~Advgi  105 (135)
T d2b8ea1          87 FVGDGINDAPALAQADLGI  105 (135)
T ss_dssp             EEECSSSSHHHHHHSSEEE
T ss_pred             EEeCCCCcHHHHHhCCeee
Confidence            9999999999999998653

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=97.60  E-value=1.9e-05  Score=74.24  Aligned_cols=40  Identities=18%  Similarity=0.183  Sum_probs=35.5

Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 009774          460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV  500 (526)
Q Consensus       460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~  500 (526)
                      -+-...+.+++.++++ ++++++|||+.+|+..-..+|..+
T Consensus       190 ~K~~ai~~l~~~~~i~-~~~vva~GD~~ND~~ml~~~~~sv  229 (267)
T d1nf2a_         190 DKGKALRFLRERMNWK-KEEIVVFGDNENDLFMFEEAGLRV  229 (267)
T ss_dssp             CHHHHHHHHHHHHTCC-GGGEEEEECSHHHHHHHTTCSEEE
T ss_pred             chhHHHHHHHHhhccC-cccEEEEcCCcchHHHHHhCCcEE
Confidence            3467789999999997 999999999999999999999743

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.08  E-value=0.00028  Score=64.32  Aligned_cols=39  Identities=13%  Similarity=0.008  Sum_probs=30.7

Q ss_pred             HHHHHHHc-CCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeC
Q 009774          465 YVEITNSL-GVDKPSEILFVTDVYQEATAAKAAGLEVVISIR  505 (526)
Q Consensus       465 ~~~~~~~l-~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~  505 (526)
                      ...+++.+ ++. +++++.|||+.+|+..-..+|.. |.+.+
T Consensus       184 l~~l~~~~~~~~-~~~~~a~GD~~ND~~Ml~~a~~~-va~~N  223 (243)
T d1wzca1         184 AKILLDFYKRLG-QIESYAVGDSYNDFPMFEVVDKV-FIVGS  223 (243)
T ss_dssp             HHHHHHHHHTTS-CEEEEEEECSGGGHHHHTTSSEE-EEESS
T ss_pred             HHHHHHHhcCCC-cccEEEEcCCHhHHHHHHcCCcE-EEeCC
Confidence            34567777 486 89999999999999999999954 44443

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.03  E-value=0.00034  Score=57.49  Aligned_cols=36  Identities=11%  Similarity=0.006  Sum_probs=29.4

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHh
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFG  437 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~  437 (526)
                      .|+|++.++|+.|+++|+.+.+.|..+........+
T Consensus        21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~   56 (122)
T d2obba1          21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIE   56 (122)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHH
Confidence            377999999999999999999999997665444333

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=96.73  E-value=0.0023  Score=55.50  Aligned_cols=95  Identities=13%  Similarity=0.082  Sum_probs=66.9

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceE----Ee------------------CCcCCC
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGF----FD------------------TAVGNK  459 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i----~~------------------~~~~~K  459 (526)
                      +|.|++.++++.|++.|+++.++|+-+......+.+.+   |+...-..+    +.                  .....+
T Consensus        20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~---Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar   96 (168)
T d1wpga2          20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRI---GIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFAR   96 (168)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT---TSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEES
T ss_pred             CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHc---CCCCCccccccccccccccchhhHHHHhhhhhhhhhhhc
Confidence            68899999999999999999999999999999999999   764321111    10                  011112


Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 009774          460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV  500 (526)
Q Consensus       460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~  500 (526)
                      =.|+-=..+.+.+.-. ...+.||||..+|..+-+.|.+-.
T Consensus        97 ~~p~~K~~lv~~l~~~-g~~Va~vGDG~nD~~AL~~AdvGI  136 (168)
T d1wpga2          97 VEPSHKSKIVEYLQSY-DEITAMTGDGVNDAPALKKAEIGI  136 (168)
T ss_dssp             CCHHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEE
T ss_pred             cchhHHHHHHHHHHhc-ccceeEEecCCCCHHHHHhCCEEE
Confidence            2233333344444443 457999999999999999998543

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=96.63  E-value=0.0016  Score=53.30  Aligned_cols=27  Identities=30%  Similarity=0.362  Sum_probs=24.6

Q ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCch
Q 009774          402 EVFDDVPEALEKWHSLGTKVYIYSSGS  428 (526)
Q Consensus       402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~  428 (526)
                      .|.+++.+.|+.|++.|+++.+.|...
T Consensus        24 ~P~~~~Ie~l~~l~~~G~~Iii~TaR~   50 (124)
T d1xpja_          24 LPRLDVIEQLREYHQLGFEIVISTARN   50 (124)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCC
Confidence            477899999999999999999999884

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=96.62  E-value=0.0018  Score=57.91  Aligned_cols=34  Identities=18%  Similarity=0.059  Sum_probs=28.4

Q ss_pred             HHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEe
Q 009774          469 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISI  504 (526)
Q Consensus       469 ~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~  504 (526)
                      ++++|++ +++++.|||+.+|+..-+.+|. +|.|.
T Consensus       196 ~~~l~i~-~~~~iafGD~~NDl~Ml~~a~~-~vaV~  229 (232)
T d1xvia_         196 YQQLSGK-RPTTLGLGDGPNDAPLLEVMDY-AVIVK  229 (232)
T ss_dssp             HHHHHSS-CCEEEEEESSGGGHHHHHTSSE-EEECC
T ss_pred             HHHcCCC-hhcEEEEcCCHhHHHHHHhCCe-EEEEe
Confidence            3467897 9999999999999999999996 55553

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.0018  Score=58.20  Aligned_cols=32  Identities=9%  Similarity=-0.115  Sum_probs=24.8

Q ss_pred             CCCCCCcEEEEec----CHhhHHHHHHcCCcEEEEeC
Q 009774          473 GVDKPSEILFVTD----VYQEATAAKAAGLEVVISIR  505 (526)
Q Consensus       473 ~~~~p~~~l~VgD----s~~Di~~A~~aG~~~i~v~~  505 (526)
                      +.+ +++++.|||    +.+|+..-+.+|..++.++.
T Consensus       195 ~~~-~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~  230 (243)
T d2amya1         195 NDG-YKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA  230 (243)
T ss_dssp             TSC-CSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred             CCC-cceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC
Confidence            355 889999999    56999999999976776654

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.08  E-value=0.0039  Score=54.60  Aligned_cols=90  Identities=13%  Similarity=0.099  Sum_probs=65.2

Q ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774          401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS  478 (526)
Q Consensus       401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~  478 (526)
                      +.+.||+.++|+.+.+. |.++|.|.+.+++++.+++.+   .-...|...+  +.+...++   .+.+-++.+|-+ .+
T Consensus        54 v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il~~l---dp~~~~~~~~~r~~c~~~~~---~~~KdL~~l~~~-l~  125 (181)
T d1ta0a_          54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLL---DKWGAFRARLFRESCVFHRG---NYVKDLSRLGRD-LR  125 (181)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHH---CSSCCEEEEECGGGSEEETT---EEECCGGGSCSC-GG
T ss_pred             EecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHHHHh---ccCCceeEEEEeeeeeecCC---cccccHhhcCCC-HH
Confidence            35789999999999986 999999999999999999998   5555565555  22222121   133456677886 89


Q ss_pred             cEEEEecCHhhHHHHHHcCC
Q 009774          479 EILFVTDVYQEATAAKAAGL  498 (526)
Q Consensus       479 ~~l~VgDs~~Di~~A~~aG~  498 (526)
                      ++++|+|++.-...-...|+
T Consensus       126 ~vvivDd~~~~~~~~~~N~I  145 (181)
T d1ta0a_         126 RVLILDNSPASYVFHPDNAV  145 (181)
T ss_dssp             GEEEECSCGGGGTTCGGGBC
T ss_pred             HeEEEcCChhhhhcCccCee
Confidence            99999999865433333444

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.85  E-value=0.0087  Score=53.32  Aligned_cols=31  Identities=6%  Similarity=-0.117  Sum_probs=25.4

Q ss_pred             CCCCCcEEEEecCH----hhHHHHHHcCCcEEEEeC
Q 009774          474 VDKPSEILFVTDVY----QEATAAKAAGLEVVISIR  505 (526)
Q Consensus       474 ~~~p~~~l~VgDs~----~Di~~A~~aG~~~i~v~~  505 (526)
                      .+ +++++.|||+.    +|++.-..+|..++.+.+
T Consensus       196 ~~-~~ev~afGD~~~~G~ND~eml~~a~~~~~av~n  230 (244)
T d2fuea1         196 DS-FDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS  230 (244)
T ss_dssp             SC-CSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred             CC-hhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCC
Confidence            44 78999999985    999999999977776654

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=92.30  E-value=0.034  Score=50.03  Aligned_cols=39  Identities=15%  Similarity=0.187  Sum_probs=33.6

Q ss_pred             CHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 009774          461 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV  500 (526)
Q Consensus       461 ~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~  500 (526)
                      +-.....+++.+|++ +++|+++||+.+|+..-+.+|..+
T Consensus       163 K~~a~~~l~~~~gi~-~~~~v~~GD~~ND~~Ml~~~~~~v  201 (244)
T d1s2oa1         163 KGNATQYLQQHLAME-PSQTLVCGDSGNDIGLFETSARGV  201 (244)
T ss_dssp             HHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHTSSSEEE
T ss_pred             hhHHHHHHHHhccCC-hhhEEEEcCCCCCHHHHhhCCcEE
Confidence            345678899999997 999999999999999999998543

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=87.54  E-value=0.15  Score=44.40  Aligned_cols=44  Identities=16%  Similarity=0.148  Sum_probs=28.6

Q ss_pred             CCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCC
Q 009774          477 PSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE  525 (526)
Q Consensus       477 p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e  525 (526)
                      .+++++|||+.+|+..-..+|.. +.+..+ +.   +..+.+.+++..|
T Consensus       170 ~~~~i~~GDs~ND~~Mf~~~~~~-~av~~g-~~---~~~A~~~~~~~~e  213 (229)
T d1u02a_         170 ERPAIIAGDDATDEAAFEANDDA-LTIKVG-EG---ETHAKFHVADYIE  213 (229)
T ss_dssp             TSCEEEEESSHHHHHHHHTTTTS-EEEEES-SS---CCCCSEEESSHHH
T ss_pred             cccceeecCCCChHHHHhccCCe-EEEEeC-CC---CccCeEEcCCHHH
Confidence            56899999999999999888763 233322 11   1233566666443

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=86.74  E-value=0.22  Score=43.43  Aligned_cols=15  Identities=20%  Similarity=0.255  Sum_probs=12.2

Q ss_pred             eEEEEeccccccccc
Q 009774          285 RCIVLDIEGTTTPIS  299 (526)
Q Consensus       285 kaVlFD~DGTL~d~~  299 (526)
                      -.|+|||||||++..
T Consensus         5 ~li~~DlDGTLl~~~   19 (232)
T d1xvia_           5 LLVFSDLDGTLLDSH   19 (232)
T ss_dssp             EEEEEECTTTTSCSS
T ss_pred             EEEEEECCCCccCCc
Confidence            378889999999754

>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: AF1437-like
domain: Hypothetical protein AF1437
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.52  E-value=0.3  Score=43.64  Aligned_cols=39  Identities=10%  Similarity=-0.002  Sum_probs=35.0

Q ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhc
Q 009774          400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS  439 (526)
Q Consensus       400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l  439 (526)
                      .+.+.||+.++|+.|.+. .+-+|+|.+-.++.+++.+++
T Consensus        79 ~~~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~  117 (308)
T d1y8aa1          79 SAKFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMI  117 (308)
T ss_dssp             HCCBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHT
T ss_pred             ceeecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhc
Confidence            346999999999999987 899999999999999998888

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=84.15  E-value=0.31  Score=43.21  Aligned_cols=62  Identities=6%  Similarity=-0.037  Sum_probs=32.2

Q ss_pred             HHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHH-HHHHcCCcEEEEeCC
Q 009774          430 LAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEAT-AAKAAGLEVVISIRP  506 (526)
Q Consensus       430 ~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~-~A~~aG~~~i~v~~~  506 (526)
                      ..++.+++.+   |+..--...+.+.   .-|-.+|.    .     ....+.||+....++ .|...+....++...
T Consensus       165 ~a~~~l~~~~---gi~~~~~v~~GD~---~ND~~Ml~----~-----~~~~vav~na~~~lk~~a~~~~~~~~~~~~~  227 (244)
T d1s2oa1         165 NATQYLQQHL---AMEPSQTLVCGDS---GNDIGLFE----T-----SARGVIVRNAQPELLHWYDQWGDSRHYRAQS  227 (244)
T ss_dssp             HHHHHHHHHT---TCCGGGEEEEECS---GGGHHHHT----S-----SSEEEECTTCCHHHHHHHHHHCCTTEEECSS
T ss_pred             HHHHHHHHhc---cCChhhEEEEcCC---CCCHHHHh----h-----CCcEEEeCCCCHHHHHHhhcccccceEEcCC
Confidence            3567777887   7754222222221   22333332    1     346788887665554 445566665666543