Citrus Sinensis ID: 009861

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520---
MDSGNFVLQDDQVGISLWESFKHPTDTFLAGMYMGENLSSTSWAGQDDPKPGNFTFKMDQGENQYQITKPFIWYWRSAELQDVFSPDEIIPYQILYLLSNFSQSVNPAGKKSVHNNLTVTPMDYSRMRLIMNCTGEIQCWIEDKVKGWSLIWWEPRDPCSVIHSCGTFGSCNSNYERECQFLRGFGPVSPEHWNSGDFSGSRTGKTALCGGKDMFLRLKMTKIWKTDSNLPVNNETECLKECLSSCRCQAYSYEESDNTRRDNPSDGGTCWIWTEELNDLQQGFSNGSRDLCVRVAASDLGQINFMAPIGTYSVTGIYPDSRNFSIQLKGADNYRRNPNGTFHLNQSLPFYFIALANLGNSTFYFSYKNAYEVEIGWNPPPEPTRTSPRDCEDWPHSTCKLTDNGETRCLCNETFRWDGNALKCIQRKNGNYSLKGHDICATGKNVPVEKGRIGFPSNGWPDRAENKPGGDSTQQVDAFNGRKKQQWTLIFGVTIASGIILSCIIIYFYTRRKRIHPLCTLFY
cccccEEEEEcccccEEEEcccccccccccccccccccEEEEcccccccccccEEEEEEccccEEEEEEccEEEEEccccccccccccccccccccccccEEEEEcccccEEEEEEEEEcccccEEEEEEEcccEEEEEEEccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccEEEEcccHHHcccccccccccEEEEEEccccccccccccEEEEEEEEEEHHHHHHHHHHHccccccccccccccccccccEEEEEHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEEEcccccEEcccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEcHHHHHHHHHHHEEEccccccccccccc
cccccEEEEccccccEEEEcccccccccccccccccccEEcccccccccccccEEEEEcccccEEEEEcccEEEEEccccccEEEccccccccccEEEEEEEccccEEEEEEEEEcccccccEEEEEEEccccEEEEEEEcccccccEEEEEEccccccccHcccccccEcccccccccccccccccccHHHHcccccccccEEccEcccccccEEEccccccccccEEEEcccHHHHHHHHHHccccEEEEEccEEcccccccccccEEEEEcccHHHHHHHHHcccccEEEEEcHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHcccccccEEEEEcccccccccccccccccccccccccccccccEEEEccccEcccccHHHHHHHHccccccccccEEEccccccccccccccccccccccccccccccccHEHHccccccHHHHHHHHHHHHHHHHHHHHHHEHHHHHHcccccccEccc
mdsgnfvlqddqvGISLwesfkhptdtflagmymgenlsstswagqddpkpgnftfkmdqgenqyqitkpFIWYWrsaelqdvfspdeiipYQILYLLSNfsqsvnpagkksvhnnltvtpmdYSRMRLIMNCTGEIQCWIedkvkgwsliwweprdpcsvihscgtfgscnsnYERECQFlrgfgpvspehwnsgdfsgsrtgktalcggkdMFLRLKMTKIwktdsnlpvnneTECLKECLsscrcqaysyeesdntrrdnpsdggtcwIWTEELNDLQqgfsngsrdLCVRVAAsdlgqinfmapigtysvtgiypdsrnfsiqlkgadnyrrnpngtfhlnqslPFYFIALANlgnstfyfSYKNAYeveigwnpppeptrtsprdcedwphstckltdngetrclcnetfrwdgnALKCIQrkngnyslkghdicatgknvpvekgrigfpsngwpdraenkpggdstqqVDAFNGRKKQQWTLIFGVTIASGIILSCIIIYFYtrrkrihplctlfy
MDSGNFVLQDDQVGISLWESFKHPTDTFLAGMYMGENLSSTSWAGQDDPKPGNFTFKMDQGENQYQITKPFIWYWRSAELQDVFSPDEIIPYQILYLLSNFSQSVNpagkksvhnnltVTPMDYSRMRLIMNCTGEIQCWIEDKVKGWSLIWWEPRDPCSVIHSCGTFGSCNSNYERECQFLRGFGPVSPEHWNSGDFSGSRTGKTALCGGKDMFLRLKMTKiwktdsnlpvnNETECLKECLSSCRCQAYsyeesdntrrdnpSDGGTCWIWTEELNDLQQGFSNGSRDLCVRVAASDLGQINFMAPIGTYSVTGIYPDSRNFSIQLKGADNYRRNPNGTFHLNQSLPFYFIALANLGNSTFYFSYKNAYEVEIGWNPPPEPTRTSPRDCEDWPHStckltdngetrcLCNETFRWDGNALKCIQRKngnyslkghdicATGKNVPVEKGRIGFPSNGWPDRAENKPGGDSTQQVDAFNGRKKQQWTLIFGVTIASGIILSCIIIYFYTRRKRIHPLCTLFY
MDSGNFVLQDDQVGISLWESFKHPTDTFLAGMYMGENLSSTSWAGQDDPKPGNFTFKMDQGENQYQITKPFIWYWRSAELQDVFSPDEIIPYQILYLLSNFSQSVNPAGKKSVHNNLTVTPMDYSRMRLIMNCTGEIQCWIEDKVKGWSLIWWEPRDPCSVIHSCGTFGSCNSNYERECQFLRGFGPVSPEHWNSGDFSGSRTGKTALCGGKDMFLRLKMTKIWKTDSNLPVNNETECLKECLSSCRCQAYSYEESDNTRRDNPSDGGTCWIWTEELNDLQQGFSNGSRDLCVRVAASDLGQINFMAPIGTYSVTGIYPDSRNFSIQLKGADNYRRNPNGTFHLNQSLPFYFIALANLGNSTFYFSYKNAYEVEIGWNPPPEPTRTSPRDCEDWPHSTCKLTDNGETRCLCNETFRWDGNALKCIQRKNGNYSLKGHDICATGKNVPVEKGRIGFPSNGWPDRAENKPGGDSTQQVDAFNGRKKQQWTLIFGVTiasgiilsciiiYFYTRRKRIHPLCTLFY
*****FVLQDDQVGISLWESFKHPTDTFLAGMYMGENL*****************F****GENQYQITKPFIWYWRSAELQDVFSPDEIIPYQILYLLSNFSQSVNPAGKKSVHNNLTVTPMDYSRMRLIMNCTGEIQCWIEDKVKGWSLIWWEPRDPCSVIHSCGTFGSCNSNYERECQFLRGFGPVSPEHWNSGDFSGSRTGKTALCGGKDMFLRLKMTKIWKTDSNLPVNNETECLKECLSSCRCQAYSY**************GTCWIWTEELNDLQQGFSNGSRDLCVRVAASDLGQINFMAPIGTYSVTGIYPDSRNFSIQLKGADNYRRNPNGTFHLNQSLPFYFIALANLGNSTFYFSYKNAYEVEIGWN***************WPHSTCKLTDNGETRCLCNETFRWDGNALKCIQRKNGNYSLKGHDICATGKNVPVEKGRIG****************************KKQQWTLIFGVTIASGIILSCIIIYFYTRRKRIHPLCTLF*
MDSGNFVLQDDQVGISLWESFKHPTDTFLAGMYMGENLSSTSWAGQDDPKPGNFTFKMDQGENQYQITKPFIWYWRSAELQDVFSPDEIIPYQILYLLSNFSQSVNPAGKKSVHNNLTVTPMDYSRMRLIMNCTGEIQCWIEDKVKGWSLIWWEPRDPCSVIHSCGTFGSCNSNYERECQFLRGFGPVSPEHWNSGDFSGSRTGKTALCGGKDMFLRLKMTKIWKTDSNLPVNNETECLKECLSSCRCQAYSYEESDNTRRDNPSDGGTCWIWTEELNDLQQGFSNGSRDLCVRVAASDLGQINFMAPIGTYSVTGIYPDSRNFSIQLK*********************YFIALANLGNSTFYFSYKNAYEVEIGWNPPPEPTRTSPRDCEDWPHST*******ETRCLCNETFRWDGNALK******************TGKNVPVEKGRIGFPSNGW***************VDAFNGRKKQQWTLIFGVTIASGIILSCIIIYFYTRRKRIHPLCTLFY
MDSGNFVLQDDQVGISLWESFKHPTDTFLAGMYMGENLSSTSWAGQDDPKPGNFTFKMDQGENQYQITKPFIWYWRSAELQDVFSPDEIIPYQILYLLSNFSQSVNPAGKKSVHNNLTVTPMDYSRMRLIMNCTGEIQCWIEDKVKGWSLIWWEPRDPCSVIHSCGTFGSCNSNYERECQFLRGFGPVSPEHWNSGDFSGSRTGKTALCGGKDMFLRLKMTKIWKTDSNLPVNNETECLKECLSSCRCQAY*************SDGGTCWIWTEELNDLQQGFSNGSRDLCVRVAASDLGQINFMAPIGTYSVTGIYPDSRNFSIQLKGADNYRRNPNGTFHLNQSLPFYFIALANLGNSTFYFSYKNAYEVEIGWNPPP*************PHSTCKLTDNGETRCLCNETFRWDGNALKCIQRKNGNYSLKGHDICATGKNVPVEKGRIGFPSNGWPDRAE*********QVDAFNGRKKQQWTLIFGVTIASGIILSCIIIYFYTRRKRIHPLCTLFY
**SGNFVLQDDQVGISLWESFKHPTDTFLAGMYMGENLSSTSWAGQDDPKPGNFTFKMDQGENQYQITKPFIWYWRSAELQDVFSPDEIIPYQILYLLSNFSQSVNPAGKKSVHNNLTVTPMDYSRMRLIMNCTGEIQCWIEDKVKGWSLIWWEPRDPCSVIHSCGTFGSCNSNYERECQFLRGFGPVSPEHWNSGDFSGSRTGKTALCGGKDMFLRLKMTKIWKTDSNLPVNNETECLKECLSSCRCQAYSYEESDNTRRDNPSDGGTCWIWTEELNDLQQGFSNGSRDLCVRVAASDLGQINFMAPIGTYSVTGIYPDSRNFSIQLKGADNYRRNPN*****NQSLPFYFIALANLGNSTFYFSYKNAYEVEIGWNPPPEPTRTSPRDCEDWPHSTCKLTDNGETRCLCNETFRWDGNALKCIQRKNGNYSLKGHDICATGKNVPVEKGRIGFPSNGWPDR******GDSTQQVDAFNGRKKQQWTLIFGVTIASGIILSCIIIYFYTRRKRIHPLCTLFY
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
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MDSGNFVLQDDQVGISLWESFKHPTDTFLAGMYMGENLSSTSWAGQDDPKPGNFTFKMDQGENQYQITKPFIWYWRSAELQDVFSPDEIIPYQILYLLSNFSQSVNPAGKKSVHNNLTVTPMDYSRMRLIMNCTGEIQCWIEDKVKGWSLIWWEPRDPCSVIHSCGTFGSCNSNYERECQFLRGFGPVSPEHWNSGDFSGSRTGKTALCGGKDMFLRLKMTKIWKTDSNLPVNNETECLKECLSSCRCQAYSYEESDNTRRDNPSDGGTCWIWTEELNDLQQGFSNGSRDLCVRVAASDLGQINFMAPIGTYSVTGIYPDSRNFSIQLKGADNYRRNPNGTFHLNQSLPFYFIALANLGNSTFYFSYKNAYEVEIGWNPPPEPTRTSPRDCEDWPHSTCKLTDNGETRCLCNETFRWDGNALKCIQRKNGNYSLKGHDICATGKNVPVEKGRIGFPSNGWPDRAENKPGGDSTQQVDAFNGRKKQQWTLIFGVTIASGIILSCIIIYFYTRRKRIHPLCTLFY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query523 2.2.26 [Sep-21-2011]
Q9ZR08 852 G-type lectin S-receptor- no no 0.548 0.336 0.437 8e-62
Q39086 843 Receptor-like serine/thre no no 0.529 0.328 0.338 5e-32
O81905 850 Receptor-like serine/thre no no 0.525 0.323 0.347 6e-32
P0DH86 853 G-type lectin S-receptor- no no 0.541 0.331 0.306 8e-31
P0DH87546 Putative inactive G-type no no 0.548 0.525 0.306 1e-30
O64477 828 G-type lectin S-receptor- no no 0.525 0.332 0.308 6e-30
Q09092 857 Putative serine/threonine N/A no 0.548 0.334 0.284 3e-26
P22553435 S-locus-specific glycopro N/A no 0.544 0.655 0.304 3e-26
O81832 783 G-type lectin S-receptor- no no 0.525 0.351 0.305 4e-26
P17840435 S-locus-specific glycopro N/A no 0.531 0.639 0.280 7e-26
>sp|Q9ZR08|Y4230_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS=Arabidopsis thaliana GN=At4g03230 PE=3 SV=3 Back     alignment and function desciption
 Score =  238 bits (607), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 136/311 (43%), Positives = 189/311 (60%), Gaps = 24/311 (7%)

Query: 1   MDSGNFVL-QDDQVGISLWESFKHPTDTFLAGMYMGENLSSTSWAGQDDPKPGNFTFKMD 59
           MD+GN VL  D      +W+SF++PTDTFL GM M EN++ +SW   +DP  GNFTF+MD
Sbjct: 134 MDNGNLVLISDGNEANVVWQSFQNPTDTFLPGMRMDENMTLSSWRSFNDPSHGNFTFQMD 193

Query: 60  QGEN-QYQITKPFIWYWRSAELQDVFSPDEIIPYQILYLLSNFSQSVNPAGKKSVHNNLT 118
           Q E+ Q+ I K  + YW+S         DE+ PY I Y LSNF+++V      +VHN  +
Sbjct: 194 QEEDKQFIIWKRSMRYWKSGISGKFIGSDEM-PYAISYFLSNFTETV------TVHNA-S 245

Query: 119 VTPM---DYSRMRLIMNCTGEIQCWIEDKVKGWSLIWWEPRDPCSVIHSCGTFGSCNSNY 175
           V P+    Y+  R  M+ +G+ Q +  D  + W+ IW EPRD CSV ++CG FGSCNS  
Sbjct: 246 VPPLFTSLYTNTRFTMSSSGQAQYFRLDGERFWAQIWAEPRDECSVYNACGNFGSCNSKN 305

Query: 176 ERECQFLRGFGPVSPEHWNSGDFSGSRTGKTALCGGK-----DMFLRLKMTKIWKTDSNL 230
           E  C+ L GF P   E W  GDFSG  + ++ +CG       DMFL L + ++   DS  
Sbjct: 306 EEMCKCLPGFRPNFLEKWVKGDFSGGCSRESRICGKDGVVVGDMFLNLSVVEVGSPDSQF 365

Query: 231 PVNNETECLKECLSSCRCQAYSYEESDNTRRDNPSDGGTCWIWTEELNDLQQGFSNGSRD 290
             +NE EC  ECL++C+CQAYSYEE D  + +       CWIW E+LN+L++G+  GSR+
Sbjct: 366 DAHNEKECRAECLNNCQCQAYSYEEVDILQSNTK-----CWIWLEDLNNLKEGYL-GSRN 419

Query: 291 LCVRVAASDLG 301
           + +RVA  D+G
Sbjct: 420 VFIRVAVPDIG 430

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1
>sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1 Back     alignment and function description
>sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1 Back     alignment and function description
>sp|P0DH86|SRK_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=SRK PE=2 SV=1 Back     alignment and function description
>sp|P0DH87|PSRK_ARATH Putative inactive G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=PSEUDOSRKA PE=5 SV=1 Back     alignment and function description
>sp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana GN=At2g19130 PE=2 SV=1 Back     alignment and function description
>sp|Q09092|SRK6_BRAOE Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=2 Back     alignment and function description
>sp|P22553|SLSG2_BRAOA S-locus-specific glycoprotein BS29-2 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1 Back     alignment and function description
>sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=3 SV=4 Back     alignment and function description
>sp|P17840|SLSG3_BRAOL S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query523
147780897 1000 hypothetical protein VITISV_007503 [Viti 0.791 0.414 0.415 1e-85
356544860 991 PREDICTED: G-type lectin S-receptor-like 0.801 0.422 0.398 2e-85
359485737 1379 PREDICTED: G-type lectin S-receptor-like 0.772 0.292 0.410 8e-85
449453474 1030 PREDICTED: G-type lectin S-receptor-like 0.812 0.412 0.392 1e-79
359485739 1585 PREDICTED: G-type lectin S-receptor-like 0.791 0.261 0.404 2e-79
449493195 1010 PREDICTED: G-type lectin S-receptor-like 0.812 0.420 0.392 2e-79
334186339 1010 S-locus lectin protein kinase-like prote 0.787 0.407 0.379 6e-78
147866295 915 hypothetical protein VITISV_007487 [Viti 0.757 0.432 0.385 2e-75
224146689 999 predicted protein [Populus trichocarpa] 0.797 0.417 0.374 1e-68
255563425 1553 serine-threonine protein kinase, plant-t 0.560 0.188 0.463 6e-66
>gi|147780897|emb|CAN72645.1| hypothetical protein VITISV_007503 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  323 bits (828), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 198/476 (41%), Positives = 258/476 (54%), Gaps = 62/476 (13%)

Query: 1   MDSGNFVLQDDQVGISLWESFKHPTDTFLAGMYMGENLSSTSWAGQDDPKPGNFTFKMDQ 60
           MDSGN VL D++ G+ LWESF +PTDTFL GM M ENL+ TSW G DDP PGNFTFK+DQ
Sbjct: 135 MDSGNLVLSDNRSGVILWESFHNPTDTFLPGMKMDENLTLTSWRGSDDPAPGNFTFKLDQ 194

Query: 61  -GENQYQITKPFIWYWRSAELQDVFSPDEIIPYQILYLLSNFSQSVNPAGKKSVHN-NLT 118
             E+QY I    + +W S + +   +PDE +P  IL LLSNFS++  P      +N  L 
Sbjct: 195 DNEDQYNIQDLIVSHWSSEDSKG--TPDE-MPGSILNLLSNFSKTGKPTSPSKFYNRTLE 251

Query: 119 VTPMDYSRM-RLIMNCTGEIQCWIEDKVKGWSLIWWEPRDPCSVIHSCGTFGSCNSNYER 177
           +    Y    RL+M+ +GEI+ ++       S  WW P+D CSV  +CG FGSCN+NY  
Sbjct: 252 ILSSRYKNTSRLVMSSSGEIRYYLNP--NRLSPDWWAPQDRCSVSKACGKFGSCNTNYAL 309

Query: 178 ECQFLRGFGPVSPEHWNSGDFSGSRTGKTALC---GGKDMFLRLKMTKIWKTDS--NLPV 232
            C+ L GF P SP+ W + +FS   T K+ +C     KDMFL LKM K+ K DS  N   
Sbjct: 310 MCKCLPGFKPASPDKWKTEEFSSGCTRKSPICEENSSKDMFLSLKMMKVRKPDSRINADP 369

Query: 233 NNETECLKECLSSCRCQAYSYEESDNTRRDNPSDGGTCWIWTEELNDLQQGFSNGSRDLC 292
           N+   C K CL  C+CQAY+  E+   +    +D   C IWTE+L DLQ+ ++  + +L 
Sbjct: 370 NDSDPCRKACLEKCQCQAYA--ETYIKQERGVADALECLIWTEDLTDLQEEYAFDAYNLS 427

Query: 293 VRVAASDL---------------------------------------GQINFMAPIGTYS 313
           VRVA SD+                                       GQ+ F  P G Y 
Sbjct: 428 VRVAISDIKPTVRNCETCGSNMIPYPLSTGSKCGDPMYFNFECNSTTGQVQFKVPGGAYR 487

Query: 314 VTGIYPDSRNFSIQLKGADNYRRNPNGTFHLNQSLPFYFI-ALANLGNSTF--YFSYKNA 370
           VT I P++  F IQLK AD   R    +       PF  I     +G   F    S KN+
Sbjct: 488 VTSINPETLXFVIQLKEADCXSR----SLIPPLDPPFRIIDXCKEVGTDHFGSEMSLKNS 543

Query: 371 YEVEIGWNPPPEPTRTSPRDCEDWPHSTCKLTDNGETRCLCNETFRWDGNALKCIQ 426
            EVEI W+PP EP  TS  DC+DWP+STC  T +G  RC CNE F+W+ ++L C Q
Sbjct: 544 IEVEISWDPPSEPACTSSADCKDWPNSTCG-TRDGMRRCFCNENFKWNSSSLNCTQ 598

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356544860|ref|XP_003540865.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230-like [Glycine max] Back     alignment and taxonomy information
>gi|359485737|ref|XP_003633326.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449453474|ref|XP_004144482.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359485739|ref|XP_002262617.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449493195|ref|XP_004159218.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|334186339|ref|NP_192232.5| S-locus lectin protein kinase-like protein [Arabidopsis thaliana] gi|332656895|gb|AEE82295.1| S-locus lectin protein kinase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|147866295|emb|CAN79929.1| hypothetical protein VITISV_007487 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224146689|ref|XP_002326099.1| predicted protein [Populus trichocarpa] gi|222862974|gb|EEF00481.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255563425|ref|XP_002522715.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223538065|gb|EEF39677.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query523
TAIR|locus:2141181 850 RK3 "receptor kinase 3" [Arabi 0.529 0.325 0.346 1.7e-36
TAIR|locus:2018546 843 RK1 "receptor kinase 1" [Arabi 0.529 0.328 0.335 3.3e-35
TAIR|locus:2059103 828 AT2G19130 [Arabidopsis thalian 0.531 0.335 0.305 1.2e-30
TAIR|locus:2018506 847 RK2 "receptor kinase 2" [Arabi 0.537 0.331 0.329 4.6e-27
TAIR|locus:2141176 849 B120 [Arabidopsis thaliana (ta 0.531 0.327 0.321 6e-27
TAIR|locus:2131684 783 AT4G27290 [Arabidopsis thalian 0.531 0.355 0.320 1.1e-26
TAIR|locus:2137010 849 AT4G11900 [Arabidopsis thalian 0.529 0.326 0.308 1.5e-25
UNIPROTKB|O49974 848 KIK1 "Serine/threonine-protein 0.529 0.326 0.300 9.3e-25
TAIR|locus:2200908 842 AT1G61610 [Arabidopsis thalian 0.573 0.356 0.294 2.6e-24
TAIR|locus:2197729 805 SD1-29 "S-domain-1 29" [Arabid 0.558 0.362 0.289 3.4e-21
TAIR|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 402 (146.6 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 112/323 (34%), Positives = 167/323 (51%)

Query:     1 MDSGNFVLQDDQVGIS---LWESFKHPTDTFLAGMYMGENLSS------TSWAGQDDPKP 51
             +D+GNFVL+D +       LW+SF  PTDT L  M +G +  +       SW   DDP  
Sbjct:   133 LDNGNFVLRDSKNSAPDGVLWQSFDFPTDTLLPEMKLGWDAKTGFNRFIRSWKSPDDPSS 192

Query:    52 GNFTFKMDQGENQYQITKPFIW-----YWRSAELQDV-FSP-DEIIPYQILYLLSNFSQS 104
             G+F+FK++  E   +I   F+W      +RS     + FS   E+ P++  Y++ NF+ S
Sbjct:   193 GDFSFKLET-EGFPEI---FLWNRESRMYRSGPWNGIRFSGVPEMQPFE--YMVFNFTTS 246

Query:   105 VNPAGKKSVHNNLTVTPMD-YSRMRLIMNCTGEIQ--CWIEDKVKGWSLIWWEPRDPCSV 161
                  K+ V  +  +T  D YSR+ +  + +G +Q   WIE   + W+  W+ P+D C  
Sbjct:   247 -----KEEVTYSFRITKSDVYSRLSI--SSSGLLQRFTWIET-AQNWNQFWYAPKDQCDE 298

Query:   162 IHSCGTFGSCNSNYERECQFLRGFGPVSPEHWNSGDFSGSRTGKTAL-CGGKDMFLRLKM 220
                CG +G C+SN    C  ++GF P +P+ W   D S     KT L CGG D F+RLK 
Sbjct:   299 YKECGVYGYCDSNTSPVCNCIKGFKPRNPQVWGLRDGSDGCVRKTLLSCGGGDGFVRLKK 358

Query:   221 TKIWKTDSNLPVNNET---ECLKECLSSCRCQAYSYEESDNTRRDNPSDGGTCWIWTEEL 277
              K+  T +   V+      EC ++CL  C C A++     NT  D    G  C  WT EL
Sbjct:   359 MKLPDT-TTASVDRGIGVKECEQKCLRDCNCTAFA-----NT--DIRGSGSGCVTWTGEL 410

Query:   278 NDLQQGFSNGSRDLCVRVAASDL 300
              D++  ++ G +DL VR+AA+DL
Sbjct:   411 FDIRN-YAKGGQDLYVRLAATDL 432
GO:0004672 "protein kinase activity" evidence=IEA
GO:0004674 "protein serine/threonine kinase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005886 "plasma membrane" evidence=ISM;IDA
GO:0006468 "protein phosphorylation" evidence=IEA
GO:0016301 "kinase activity" evidence=ISS
GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA
GO:0030246 "carbohydrate binding" evidence=IEA
GO:0048544 "recognition of pollen" evidence=IEA
GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS
GO:0005773 "vacuole" evidence=IDA
GO:0031625 "ubiquitin protein ligase binding" evidence=IPI
GO:0009506 "plasmodesma" evidence=IDA
GO:0046777 "protein autophosphorylation" evidence=RCA
TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059103 AT2G19130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018506 RK2 "receptor kinase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137010 AT4G11900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|O49974 KIK1 "Serine/threonine-protein kinase" [Zea mays (taxid:4577)] Back     alignment and assigned GO terms
TAIR|locus:2200908 AT1G61610 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2197729 SD1-29 "S-domain-1 29" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
AT4G03230
ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding; FUNCTIONS IN- in 6 functions; INVOLVED IN- protein amino acid phosphorylation, recognition of pollen; LOCATED IN- cellular_component unknown; EXPRESSED IN- 9 plant structures; EXPRESSED DURING- 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s- Curculin-like (mannose- [...] (1006 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query523
cd0109884 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain 8e-16
pfam01453109 pfam01453, B_lectin, D-mannose binding lectin 6e-12
pfam0827666 pfam08276, PAN_2, PAN-like domain 8e-12
pfam00954110 pfam00954, S_locus_glycop, S-locus glycoprotein fa 2e-10
smart0047378 smart00473, PAN_AP, divergent subfamily of APPLE d 1e-04
>gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins Back     alignment and domain information 
 Score = 72.1 bits (177), Expect = 8e-16
 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 14/91 (15%)

Query: 209 CGGK---DMFLRLKMTKIWKTDSNLPVNNETECLKECLSSCRCQAYSYEESDNTRRDNPS 265
           CGG    D FL+L   K+    S +   +  EC + CLS+C C AY+Y            
Sbjct: 5   CGGDGSTDGFLKLPDVKLPDNASAITAISLEECREACLSNCSCTAYAYNN---------- 54

Query: 266 DGGTCWIWTEELNDLQQGFSNGSRDLCVRVA 296
             G C +W   LN+L+   S+G   L +R+A
Sbjct: 55  GSGGCLLWNGLLNNLRS-LSSGGGTLYLRLA 84

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization. Length = 84
>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin Back     alignment and domain information
>gnl|CDD|219774 pfam08276, PAN_2, PAN-like domain Back     alignment and domain information
>gnl|CDD|201524 pfam00954, S_locus_glycop, S-locus glycoprotein family Back     alignment and domain information
>gnl|CDD|214680 smart00473, PAN_AP, divergent subfamily of APPLE domains Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 523
PF00954110 S_locus_glycop: S-locus glycoprotein family; Inter 99.88
PF0827666 PAN_2: PAN-like domain; InterPro: IPR013227 PAN do 99.49
PF01453114 B_lectin: D-mannose binding lectin; InterPro: IPR0 99.39
cd0109884 PAN_AP_plant Plant PAN/APPLE-like domain; present 99.36
cd0012980 PAN_APPLE PAN/APPLE-like domain; present in N-term 99.32
smart0047378 PAN_AP divergent subfamily of APPLE domains. Apple 98.21
cd0110073 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d 96.77
smart00108114 B_lectin Bulb-type mannose-specific lectin. 93.52
cd00028116 B_lectin Bulb-type mannose-specific lectin. The do 92.09
cd00028116 B_lectin Bulb-type mannose-specific lectin. The do 91.92
smart00108114 B_lectin Bulb-type mannose-specific lectin. 90.98
PF01453114 B_lectin: D-mannose binding lectin; InterPro: IPR0 89.51
PF0002479 PAN_1: PAN domain This Prosite entry concerns appl 89.08
PF0827771 PAN_3: PAN-like domain; InterPro: IPR006583 PAN do 83.34
smart0060594 CW CW domain. 82.46
PF0764542 EGF_CA: Calcium-binding EGF domain; InterPro: IPR0 81.0
smart0022379 APPLE APPLE domain. Four-fold repeat in plasma kal 80.21
>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation Back     alignment and domain information 
Probab=99.88  E-value=1.2e-22  Score=178.85  Aligned_cols=105  Identities=31%  Similarity=0.600  Sum_probs=84.8

Q ss_pred             eecCCCCCCCCCCcccccceeee----eeeeEEecCCCCceeEEEEEEEcCCCceEEEEEEccCCcEEEEEeecCCC-eE
Q 009861           75 WRSAELQDVFSPDEIIPYQILYL----LSNFSQSVNPAGKKSVHNNLTVTPMDYSRMRLIMNCTGEIQCWIEDKVKG-WS  149 (523)
Q Consensus        75 W~sG~w~g~~~~~~~i~~~~~~~----l~n~s~~~~~~~~~~v~~~~s~~~~~~~~~Rl~Ld~dG~Lr~y~w~~~s~-W~  149 (523)
                      ||+|+|+|.      .+.+++.+    ++++.++.+   ..++++++.+...+ .++|++||++|+||+|.|.+..+ |.
T Consensus         1 wrsG~WnG~------~f~g~p~~~~~~~~~~~fv~~---~~e~~~t~~~~~~s-~~~r~~ld~~G~l~~~~w~~~~~~W~   70 (110)
T PF00954_consen    1 WRSGPWNGQ------RFSGIPEMSSNSLYNYSFVSN---NEEVYYTYSLSNSS-VLSRLVLDSDGQLQRYIWNESTQSWS   70 (110)
T ss_pred             CCccccCCe------EECCcccccccceeEEEEEEC---CCeEEEEEecCCCc-eEEEEEEeeeeEEEEEEEecCCCcEE
Confidence            899999997      33333322    344444433   35668888755444 58999999999999999998887 99


Q ss_pred             EEEeecCCCCCCCcCCCCCcccCCCCCCcccccCCCCCCC
Q 009861          150 LIWWEPRDPCSVIHSCGTFGSCNSNYERECQFLRGFGPVS  189 (523)
Q Consensus       150 ~~w~ap~d~Cdv~g~CG~~GiC~~~~~~~CsC~pGF~p~s  189 (523)
                      +.|.+|.++||+|++||+||+|+.+..+.|+||+||+|++
T Consensus        71 ~~~~~p~d~Cd~y~~CG~~g~C~~~~~~~C~Cl~GF~P~n  110 (110)
T PF00954_consen   71 VFWSAPKDQCDVYGFCGPNGICNSNNSPKCSCLPGFEPKN  110 (110)
T ss_pred             EEEEecccCCCCccccCCccEeCCCCCCceECCCCcCCCc
Confidence            9999999999999999999999988888999999999974

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen
>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] Back     alignment and domain information
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity Back     alignment and domain information
>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins Back     alignment and domain information
>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins Back     alignment and domain information
>smart00473 PAN_AP divergent subfamily of APPLE domains Back     alignment and domain information
>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins Back     alignment and domain information
>smart00108 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>cd00028 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>cd00028 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>smart00108 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity Back     alignment and domain information
>PF00024 PAN_1: PAN domain This Prosite entry concerns apple domains, a subset of PAN domains; InterPro: IPR003014 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] Back     alignment and domain information
>PF08277 PAN_3: PAN-like domain; InterPro: IPR006583 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] Back     alignment and domain information
>smart00605 CW CW domain Back     alignment and domain information
>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins Back     alignment and domain information
>smart00223 APPLE APPLE domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query523
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 99.76
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 99.66
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 98.64
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 98.56
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 98.55
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 98.52
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 97.76
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 97.76
4h3o_A105 Lectin; cadmium, plant protein; 2.17A {Allium sati 97.59
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 97.58
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 97.57
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 97.49
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 97.31
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 97.28
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 96.88
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 96.46
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 96.37
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 96.27
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 96.14
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 96.09
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 95.77
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 95.68
4h3o_A105 Lectin; cadmium, plant protein; 2.17A {Allium sati 93.92
2ll3_A82 Micronemal protein 4; cell adhesion; NMR {Toxoplas 82.69
3ssb_I32 IMPI alpha, inducible metalloproteinase inhibitor 82.02
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Back     alignment and structure
Probab=99.76  E-value=5.1e-19  Score=178.19  Aligned_cols=133  Identities=16%  Similarity=0.184  Sum_probs=88.8

Q ss_pred             CCccCEEEEeCCCCceeeeeCCCCccccCCCcc----ccCcceEEeecCCCCCCCceEEEEecCCCceeEEec-CCEEEe
Q 009861            1 MDSGNFVLQDDQVGISLWESFKHPTDTFLAGMY----MGENLSSTSWAGQDDPKPGNFTFKMDQGENQYQITK-PFIWYW   75 (523)
Q Consensus         1 LDsGNLVL~d~~~~~vLWQSFDhPTDTLLPGqk----L~~~~~LtSwkS~~DPS~G~fsl~ld~g~~~l~l~~-~~~~YW   75 (523)
                      ||+|||||++   +.+||||  ||||||||||+    |..+++|   ++.+||++|.|+|+|+.+. .++|++ +..+||
T Consensus       117 ~d~GNlVl~~---~~~lWqS--~ptdtlLpg~~~~~~l~~g~~L---~S~~dps~G~fsl~l~~dG-nlvLy~~~~~~yW  187 (276)
T 3m7h_A          117 QDDGNIVLVD---SLALWNG--TPAIPLVPGAIDSLLLAPGSEL---VQGVVYGAGASKLVFQGDG-NLVAYGPNGAATW  187 (276)
T ss_dssp             CTTSCEEEEE---EEEEEES--CTTSCCCCSCTTCEEECSSEEE---CTTCEEEETTEEEEECTTS-CEEEECTTSSEEE
T ss_pred             eCCCCEEecC---CceeeCc--ccccccccccccccccccCccc---ccCCCCCCceEEEeecCCc-eEEEEeCCCeEEE
Confidence            6999999998   6789999  99999999999    7778888   5678999999999998322 456655 468999


Q ss_pred             ecCCCCCCCCCCcccccceeeeeeeeEEecCCCCceeEEEEEEEcCCCceEEEEEEccCCcEEEEEeecCCC-eEEEEee
Q 009861           76 RSAELQDVFSPDEIIPYQILYLLSNFSQSVNPAGKKSVHNNLTVTPMDYSRMRLIMNCTGEIQCWIEDKVKG-WSLIWWE  154 (523)
Q Consensus        76 ~sG~w~g~~~~~~~i~~~~~~~l~n~s~~~~~~~~~~v~~~~s~~~~~~~~~Rl~Ld~dG~Lr~y~w~~~s~-W~~~w~a  154 (523)
                      ++++|+....  .......    .++..... .+ ..+..+.+  ... ..+|++|+.||+|++|.|   .. |..++..
T Consensus       188 ~Sgt~~~~~~--~l~l~~d----GnLvl~d~-~~-~~vWsS~t--~~~-~~~rl~Ld~dGnLvly~~---~~~Wqsf~~~  253 (276)
T 3m7h_A          188 NAGTQGKGAV--RAVFQGD----GNLVVYGA-GN-AVLWHSHT--GGH-ASAVLRLQANGSIAILDE---KPVWARFGFQ  253 (276)
T ss_dssp             ECCCTTTTCC--EEEECTT----SCEEEECT-TS-CEEEECSC--TTC-TTCEEEECTTSCEEEEEE---EEEEESSSCC
T ss_pred             ECCCCCCccE--EEEEcCC----CeEEEEeC-CC-cEEEEecC--CCC-CCEEEEEcCCccEEEEcC---CCeEEccCcc
Confidence            9999875310  0011100    01111111 01 12222221  111 247999999999999998   23 7666665


Q ss_pred             cC
Q 009861          155 PR  156 (523)
Q Consensus       155 p~  156 (523)
                      |.
T Consensus       254 P~  255 (276)
T 3m7h_A          254 PT  255 (276)
T ss_dssp             TT
T ss_pred             CC
Confidence            53
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Back     alignment and structure
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Back     alignment and structure
>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M* Back     alignment and structure
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query523
d1dlpa2120 Fetuin-binding protein Scafet precursor {Bluebell 98.46
d1xd5a_112 Gastrodianin (antifungal protein) {Gastrodia elata 98.4
d1b2pa_119 Lectin (agglutinin) {Bluebell (Scilla campanulata) 97.93
d1jpca_108 Lectin (agglutinin) {Snowdrop (Galanthus nivalis) 97.79
d1kj1a_109 Lectin (agglutinin) {Garlic (Allium sativum) [TaxI 97.53
d1dlpa2120 Fetuin-binding protein Scafet precursor {Bluebell 97.27
d1dlpa1115 Fetuin-binding protein Scafet precursor {Bluebell 97.14
d1b2pa_119 Lectin (agglutinin) {Bluebell (Scilla campanulata) 96.06
d1jpca_108 Lectin (agglutinin) {Snowdrop (Galanthus nivalis) 96.05
d1dlpa1115 Fetuin-binding protein Scafet precursor {Bluebell 95.67
d1xd5a_112 Gastrodianin (antifungal protein) {Gastrodia elata 95.61
d1kj1a_109 Lectin (agglutinin) {Garlic (Allium sativum) [TaxI 95.11
d1emoa239 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 85.58
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=98.46  E-value=8.5e-08  Score=82.75  Aligned_cols=60  Identities=12%  Similarity=0.175  Sum_probs=45.3

Q ss_pred             cCEEEEeCCCCceee--eeCCCCccccCCCccccCcceEEeecCCCCCCCceEEEEecCCCceeEEecCCEEEeecCCC
Q 009861            4 GNFVLQDDQVGISLW--ESFKHPTDTFLAGMYMGENLSSTSWAGQDDPKPGNFTFKMDQGENQYQITKPFIWYWRSAEL   80 (523)
Q Consensus         4 GNLVL~d~~~~~vLW--QSFDhPTDTLLPGqkL~~~~~LtSwkS~~DPS~G~fsl~ld~g~~~l~l~~~~~~YW~sG~w   80 (523)
                      ||+|+++ +.+.+||  +|+++|++||.++|.|.               .|.|+|.|+.+. .|+|++...+||.+...
T Consensus         1 g~~v~~~-~~n~il~~~~~~~~~~~~l~~~q~l~---------------~g~y~L~~q~DG-NLvL~~~~~~vW~s~t~   62 (120)
T d1dlpa2           1 GSVVVAN-NGNSILYSTQGNDNHPQTLHATQSLQ---------------LSPYRLSMETDC-NLVLFDRDDRVWSTNTA   62 (120)
T ss_dssp             SCCCCSS-CCCEECCCC--CCCCCCEECSSCCCB---------------CSSCEEEEETTT-EEEEEBTTBCCSCCCCC
T ss_pred             CcEEEEe-CCCeEEEcCCCCCCcccEEcCCCeeE---------------cCCEEEEEcCCC-cEEEecCCcEEEEEccc
Confidence            7788877 4667777  78999999999999985               467999998333 36777777889987753
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Back     information, alignment and structure
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Back     information, alignment and structure
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Back     information, alignment and structure
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Back     information, alignment and structure
>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure