Citrus Sinensis ID: 009867


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520---
MEGVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPVGQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPREGSNIDEEEVLRFCKKNVAAFKVPKRVFITNELPKTASGKIQRRIVSEHFLAQVSAAKVPKFGA
cccccHHHHHHHHHHccccccEEEEcccccccHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHccEEEcccccccHHHHHHHHcccccEEEEEcccccHHHHHHHHHccccEEEEEEccccccHHHHHcccccccccccccccccccEEEEEccccccccccHHHHcHHHHHHHHHHHHHHHccccccEEEEEccHHHHHHHHHHHHHHHHcccEEEEcccccccHHHHHHHHHHccccEEEccHHHHHHHHHccccccccccccccEEEEccccccHHHHHHHHHHHcccEEEcccccccccccccccccccccccccccccccccEEEEEccccccccccccEEEEEEcccccHHHcccHHHHHHHcccccccccccEEEcccccEEEEcccccEEEccccccccHHHHHHHHHcccEEEEEEEEcccccccccEEEEEEEcccccccHHHHHHHHHHcccccccccEEEEEccccccccccccHHHHHHHHHHHHcccccccccc
cccccHHHHHHHHHHHccccEEEEEccccEEcHHHHHHHHHHHHHHHHHcccccccEEEEEEcccHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHccccEEEEEcHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHccccccccccccccccEEEEEEEcccccccccEEEcHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHHcccEEEEcccccccHHHHHHHHHHcccEEEcccHHHHHHHHHccccccccccHHcEEEEEccccccHHHHHHHHHHcccEEEEcccccccccEEEEccccccccccccccccccccEEEEEccccccccccccEEEEEEcccccccccccHHHHHHHHccccEEEEEEEEEcccccEEEEEEHHHcEEEccEEEcHHHHHHHHcccccEEEEEEEEEEEcccEEEEEEEEEEcccccccHHHHHHHHHHHcHHccccHHEEEHHHccccccccEcHHHcccHHHHHHHHcccccccc
MEGVTLIGLLNQVIDQfsskralsvsgkfdltYSRIHELVERAASRLVAAGInagdvvaltfpntVEFVIMFLAVIRARATaaplnaaytpdefeFYLSDseskllltpaeGNAAAQAAASKLNISHATATLLDADSELTLSLahsesdtnaiskltndpsdVALFLhtsgttsrpkgvpltqnnlaASVSNIKSVYKLtesdstvivLPLFHVHGMLAGLLSSFAAGAavtlpaagrfsaSTFWQDMIKYNAtwytavptiHQIVLDrhvakpepvypklrfIRSCSASLAPVILSRLEeafgapvlEAYAMTEAThlmssnplpedgphkpgsvgrpvgqeiaildeigvpqeggakgevcirgpnvtkgyknnpeanksAFLFGwfhtgdigyfdsdgYLHLVGRIKELINrggekispievDAVLLSHPDIAQAvafgvpddkygeeincaiipregsnideEEVLRFCKKNvaafkvpkrvfitnelpktasgkiQRRIVSEHFLAQvsaakvpkfga
MEGVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSgttsrpkgvpltqnnlAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPVGQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPREGSNIDEEEVLRFCKKnvaafkvpkrvfitnelpktasgkiqRRIVSEHFlaqvsaakvpkfga
MEGVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRarataaplnaaYTPDEFEFYLSDSESKLLLTPAEGNaaaqaaaSKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMlagllssfaagaavtlpaaGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPVGQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPREGSNIDEEEVLRFCKKNVAAFKVPKRVFITNELPKTASGKIQRRIVSEHFLAQVSAAKVPKFGA
***VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSD*****L**********************************************************LFL******************LAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTE***************************EIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKN**EANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPREGSNIDEEEVLRFCKKNVAAFKVPKRVFITNELPKTASGKIQRRIVSEHFLAQV**********
*EGVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAH***********TNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPVGQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPREGSNIDEEEVLRFCKKNVAAFKVPKRVFITNELPKTASGKIQRRIVS*****************
MEGVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPVGQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPREGSNIDEEEVLRFCKKNVAAFKVPKRVFITNELPKTASGKIQRRIVSEHFLAQVSAAKVPKFGA
**GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPVGQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPREGSNIDEEEVLRFCKKNVAAFKVPKRVFITNELPKTASGKIQRRIVSEHFLAQVS*********
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MEGVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPVGQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPREGSNIDEEEVLRFCKKNVAAFKVPKRVFITNELPKTASGKIQRRIVSEHFLAQVSAAKVPKFGA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query523 2.2.26 [Sep-21-2011]
Q9SMT7514 4-coumarate--CoA ligase-l yes no 0.978 0.996 0.807 0.0
O74976512 Putative peroxisomal-coen yes no 0.950 0.970 0.490 1e-133
P38137543 Peroxisomal-coenzyme A sy yes no 0.850 0.819 0.462 1e-114
Q0K844509 Probable sulfoacetate--Co yes no 0.858 0.882 0.360 3e-76
O07610513 Long-chain-fatty-acid--Co yes no 0.933 0.951 0.308 1e-70
O53306503 Long-chain-fatty-acid--Co no no 0.891 0.926 0.323 2e-62
Q65FT5478 2-succinylbenzoate--CoA l no no 0.871 0.953 0.338 2e-58
A8ALR6517 Probable crotonobetaine/c yes no 0.887 0.897 0.320 1e-57
B4EY25518 Probable crotonobetaine/c yes no 0.931 0.940 0.314 1e-56
Q5KVX9490 2-succinylbenzoate--CoA l no no 0.881 0.940 0.323 2e-56
>sp|Q9SMT7|4CLLA_ARATH 4-coumarate--CoA ligase-like 10 OS=Arabidopsis thaliana GN=4CLL10 PE=2 SV=1 Back     alignment and function desciption
 Score =  827 bits (2136), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/513 (80%), Positives = 459/513 (89%), Gaps = 1/513 (0%)

Query: 1   MEGVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVA-AGINAGDVVA 59
           M+  TL GLL  V  +F  +RALSVSGKF+LT++R+H+L+ERAASRLV+ AGI  GDVVA
Sbjct: 1   MDSDTLSGLLENVAKKFPDRRALSVSGKFNLTHARLHDLIERAASRLVSDAGIKPGDVVA 60

Query: 60  LTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAA 119
           LTFPNTVEFVIMFLAVIRARATAAPLNAAYT +EFEFYLSDS+SKLLLT  EGNA AQ A
Sbjct: 61  LTFPNTVEFVIMFLAVIRARATAAPLNAAYTAEEFEFYLSDSDSKLLLTSKEGNAPAQEA 120

Query: 120 ASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGV 179
           ASKL ISH TATLLDA S+L LS+A S+S  ++ ++L N P D ALFLHTSGTTSRPKGV
Sbjct: 121 ASKLKISHVTATLLDAGSDLVLSVADSDSVVDSATELVNHPDDGALFLHTSGTTSRPKGV 180

Query: 180 PLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRF 239
           PLTQ NLA+SV NIK+VYKLTESDSTVIVLPLFHVHG+LAGLLSS  AGAAVTLPAAGRF
Sbjct: 181 PLTQLNLASSVKNIKAVYKLTESDSTVIVLPLFHVHGLLAGLLSSLGAGAAVTLPAAGRF 240

Query: 240 SASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRL 299
           SA+TFW DM KYNATWYTAVPTIHQI+LDRH + PE  YPKLRFIRSCSASLAPVILSRL
Sbjct: 241 SATTFWPDMKKYNATWYTAVPTIHQIILDRHASHPETEYPKLRFIRSCSASLAPVILSRL 300

Query: 300 EEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPVGQEIAILDEIGVPQEGGAK 359
           EEAFGAPVLEAYAMTEATHLMSSNPLPE+GPHKPGSVG+PVGQE+AIL+E G  QE   K
Sbjct: 301 EEAFGAPVLEAYAMTEATHLMSSNPLPEEGPHKPGSVGKPVGQEMAILNEKGEIQEPNNK 360

Query: 360 GEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGEK 419
           GEVCIRGPNVTKGYKNNPEANK+ F FGWFHTGDIGYFD+DGYLHLVGRIKELINRGGEK
Sbjct: 361 GEVCIRGPNVTKGYKNNPEANKAGFEFGWFHTGDIGYFDTDGYLHLVGRIKELINRGGEK 420

Query: 420 ISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPREGSNIDEEEVLRFCKKNVAA 479
           ISPIEVDAVLL+HPD++Q VAFGVPD+KYGEEINCA+IPREG+ + EE++  FCKKN+AA
Sbjct: 421 ISPIEVDAVLLTHPDVSQGVAFGVPDEKYGEEINCAVIPREGTTVTEEDIKAFCKKNLAA 480

Query: 480 FKVPKRVFITNELPKTASGKIQRRIVSEHFLAQ 512
           FKVPKRVFIT+ LPKTASGKIQRRIV++HFL +
Sbjct: 481 FKVPKRVFITDNLPKTASGKIQRRIVAQHFLEK 513





Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 2EC: .EC: 1EC: .EC: -
>sp|O74976|FAT2_SCHPO Putative peroxisomal-coenzyme A synthetase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1827.03c PE=1 SV=1 Back     alignment and function description
>sp|P38137|FAT2_YEAST Peroxisomal-coenzyme A synthetase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PCS60 PE=1 SV=1 Back     alignment and function description
>sp|Q0K844|SAUT_CUPNH Probable sulfoacetate--CoA ligase OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauT PE=2 SV=1 Back     alignment and function description
>sp|O07610|LCFB_BACSU Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis (strain 168) GN=lcfB PE=2 SV=2 Back     alignment and function description
>sp|O53306|FAC13_MYCTU Long-chain-fatty-acid--CoA ligase FadD13 OS=Mycobacterium tuberculosis GN=fadD13 PE=1 SV=1 Back     alignment and function description
>sp|Q65FT5|MENE_BACLD 2-succinylbenzoate--CoA ligase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=menE PE=3 SV=1 Back     alignment and function description
>sp|A8ALR6|CAIC_CITK8 Probable crotonobetaine/carnitine-CoA ligase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=caiC PE=3 SV=1 Back     alignment and function description
>sp|B4EY25|CAIC_PROMH Probable crotonobetaine/carnitine-CoA ligase OS=Proteus mirabilis (strain HI4320) GN=caiC PE=3 SV=1 Back     alignment and function description
>sp|Q5KVX9|MENE_GEOKA 2-succinylbenzoate--CoA ligase OS=Geobacillus kaustophilus (strain HTA426) GN=menE PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query523
302143864523 unnamed protein product [Vitis vinifera] 1.0 1.0 0.839 0.0
225470747524 PREDICTED: putative peroxisomal-coenzyme 1.0 0.998 0.839 0.0
399630432529 4-hydroxycinnamoyl-CoA ligase 2 [Coffea 1.0 0.988 0.792 0.0
395146536512 acyl CoA ligase [Linum usitatissimum] 0.969 0.990 0.838 0.0
255539437521 AMP dependent CoA ligase, putative [Rici 0.996 1.0 0.824 0.0
224137016524 acyl:coa ligase [Populus trichocarpa] gi 1.0 0.998 0.824 0.0
16797908523 putative acyl-CoA synthetase [Capsicum a 1.0 1.0 0.785 0.0
380042376526 acyl-activating enzyme 8 [Cannabis sativ 0.994 0.988 0.777 0.0
225426389525 PREDICTED: putative peroxisomal-coenzyme 0.978 0.975 0.789 0.0
297819514514 AMP-dependent synthetase and ligase fami 0.978 0.996 0.807 0.0
>gi|302143864|emb|CBI22725.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  895 bits (2313), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/523 (83%), Positives = 483/523 (92%)

Query: 1   MEGVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVAL 60
           ME +TL GLL QV  +F S+RALSVSGKFDLTY+R+H+LVE AAS ++A G+ AGDVVAL
Sbjct: 1   MESLTLTGLLKQVAGEFPSRRALSVSGKFDLTYARLHQLVEGAASLILAGGVKAGDVVAL 60

Query: 61  TFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAA 120
           TFPNTVEFVIMFLAVIR RATAAPLN+AYT DEFEFYLSDSESKLLLT  EGN AAQAAA
Sbjct: 61  TFPNTVEFVIMFLAVIRVRATAAPLNSAYTADEFEFYLSDSESKLLLTSQEGNEAAQAAA 120

Query: 121 SKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVP 180
           SKL I+HATA+L +A++++ LSL HSE D ++++KL N+PSDVALFLHTSGTTSRPKGVP
Sbjct: 121 SKLKITHATASLTEAEAQVNLSLIHSEPDPHSVAKLVNEPSDVALFLHTSGTTSRPKGVP 180

Query: 181 LTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFS 240
           L+Q NLA+SV NIKSVYKLTESDSTVIVLPLFHVHG+LAGLLSS  AGAAVTLPAAGRFS
Sbjct: 181 LSQLNLASSVQNIKSVYKLTESDSTVIVLPLFHVHGLLAGLLSSLGAGAAVTLPAAGRFS 240

Query: 241 ASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLE 300
           ASTFW DM+KY+ATWYTAVPTIHQI+LDRH++KPEPVYPKLRFIRSCSASLAP I++RLE
Sbjct: 241 ASTFWSDMLKYDATWYTAVPTIHQIILDRHLSKPEPVYPKLRFIRSCSASLAPAIMARLE 300

Query: 301 EAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPVGQEIAILDEIGVPQEGGAKG 360
           EAFGAPVLEAYAMTEATHLM+SNPLPE+GPHKPGSVGRPVGQE+AILDE GV QE    G
Sbjct: 301 EAFGAPVLEAYAMTEATHLMASNPLPENGPHKPGSVGRPVGQEMAILDENGVQQEANVSG 360

Query: 361 EVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGEKI 420
           EVCIRGPNVTKGYKNNPEANKSAF FGWFHTGD+G+FD DGYLHLVGRIKELINRGGEKI
Sbjct: 361 EVCIRGPNVTKGYKNNPEANKSAFQFGWFHTGDLGFFDPDGYLHLVGRIKELINRGGEKI 420

Query: 421 SPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPREGSNIDEEEVLRFCKKNVAAF 480
           SPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPREGS+IDE EV RFCKKN+AAF
Sbjct: 421 SPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPREGSDIDEAEVTRFCKKNLAAF 480

Query: 481 KVPKRVFITNELPKTASGKIQRRIVSEHFLAQVSAAKVPKFGA 523
           KVPK+VFIT+ LPKTA+GKIQRRIV+EHFLAQ+S AKVPKFGA
Sbjct: 481 KVPKKVFITDSLPKTATGKIQRRIVAEHFLAQISTAKVPKFGA 523




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225470747|ref|XP_002267459.1| PREDICTED: putative peroxisomal-coenzyme A synthetase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|399630432|gb|AFP49809.1| 4-hydroxycinnamoyl-CoA ligase 2 [Coffea arabica] Back     alignment and taxonomy information
>gi|395146536|gb|AFN53690.1| acyl CoA ligase [Linum usitatissimum] Back     alignment and taxonomy information
>gi|255539437|ref|XP_002510783.1| AMP dependent CoA ligase, putative [Ricinus communis] gi|223549898|gb|EEF51385.1| AMP dependent CoA ligase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224137016|ref|XP_002322473.1| acyl:coa ligase [Populus trichocarpa] gi|222869469|gb|EEF06600.1| acyl:coa ligase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|16797908|gb|AAL29212.1|AF354454_1 putative acyl-CoA synthetase [Capsicum annuum] Back     alignment and taxonomy information
>gi|380042376|gb|AFD33352.1| acyl-activating enzyme 8 [Cannabis sativa] Back     alignment and taxonomy information
>gi|225426389|ref|XP_002272145.1| PREDICTED: putative peroxisomal-coenzyme A synthetase [Vitis vinifera] gi|297742535|emb|CBI34684.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297819514|ref|XP_002877640.1| AMP-dependent synthetase and ligase family protein [Arabidopsis lyrata subsp. lyrata] gi|297323478|gb|EFH53899.1| AMP-dependent synthetase and ligase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query523
TAIR|locus:2101368514 AAE3 "ACYL-ACTIVATING ENZYME 3 0.975 0.992 0.745 4.4e-203
POMBASE|SPCC1827.03c512 SPCC1827.03c "acetyl-CoA ligas 0.954 0.974 0.460 3.6e-112
DICTYBASE|DDB_G0279561542 DDB_G0279561 "AMP-dependent sy 0.711 0.686 0.517 2.5e-104
UNIPROTKB|G4N0E5522 MGG_06199 "Peroxisomal-coenzym 0.925 0.927 0.452 8.6e-104
ASPGD|ASPL0000073499506 fatD [Emericella nidulans (tax 0.933 0.964 0.443 3.3e-102
SGD|S000000426543 PCS60 "Peroxisomal protein tha 0.655 0.631 0.527 2.5e-100
TIGR_CMR|BA_4763563 BA_4763 "long-chain-fatty-acid 0.701 0.651 0.343 1.8e-64
TIGR_CMR|CHY_0437556 CHY_0437 "long-chain-fatty-aci 0.680 0.640 0.342 2.9e-64
TIGR_CMR|CHY_1731546 CHY_1731 "long-chain-fatty-aci 0.948 0.908 0.325 3.8e-62
TIGR_CMR|BA_1091510 BA_1091 "long-chain-fatty-acid 0.896 0.919 0.314 3.4e-61
TAIR|locus:2101368 AAE3 "ACYL-ACTIVATING ENZYME 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1965 (696.8 bits), Expect = 4.4e-203, P = 4.4e-203
 Identities = 381/511 (74%), Positives = 425/511 (83%)

Query:     1 MEGVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVA-AGINAGDVVA 59
             M+  TL GLL  V  +F  +RALSVSGKF+LT++R+H+L+ERAASRLV+ AGI  GDVVA
Sbjct:     1 MDSDTLSGLLENVAKKFPDRRALSVSGKFNLTHARLHDLIERAASRLVSDAGIKPGDVVA 60

Query:    60 LTFPNTVEFVIMFLAVIRXXXXXXXXXXXYTPDEFEFYLSDSESKLLLTPAEGNXXXXXX 119
             LTFPNTVEFVIMFLAVIR           YT +EFEFYLSDS+SKLLLT  EGN      
Sbjct:    61 LTFPNTVEFVIMFLAVIRARATAAPLNAAYTAEEFEFYLSDSDSKLLLTSKEGNAPAQEA 120

Query:   120 XSKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGV 179
              SKL ISH TATLLDA S+L LS+A S+S  ++ ++L N P D ALFLHTSGTTSRPKGV
Sbjct:   121 ASKLKISHVTATLLDAGSDLVLSVADSDSVVDSATELVNHPDDGALFLHTSGTTSRPKGV 180

Query:   180 PLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMXXXXXXXXXXXXXXXXXXXGRF 239
             PLTQ NLA+SV NIK+VYKLTESDSTVIVLPLFHVHG+                   GRF
Sbjct:   181 PLTQLNLASSVKNIKAVYKLTESDSTVIVLPLFHVHGLLAGLLSSLGAGAAVTLPAAGRF 240

Query:   240 SASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRL 299
             SA+TFW DM KYNATWYTAVPTIHQI+LDRH + PE  YPKLRFIRSCSASLAPVILSRL
Sbjct:   241 SATTFWPDMKKYNATWYTAVPTIHQIILDRHASHPETEYPKLRFIRSCSASLAPVILSRL 300

Query:   300 EEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPVGQEIAILDEIGVPQEGGAK 359
             EEAFGAPVLEAYAMTEATHLMSSNPLPE+GPHKPGSVG+PVGQE+AIL+E G  QE   K
Sbjct:   301 EEAFGAPVLEAYAMTEATHLMSSNPLPEEGPHKPGSVGKPVGQEMAILNEKGEIQEPNNK 360

Query:   360 GEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGEK 419
             GEVCIRGPNVTKGYKNNPEANK+ F FGWFHTGDIGYFD+DGYLHLVGRIKELINRGGEK
Sbjct:   361 GEVCIRGPNVTKGYKNNPEANKAGFEFGWFHTGDIGYFDTDGYLHLVGRIKELINRGGEK 420

Query:   420 ISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPREGSNIDEEEVLRFCKKNVAA 479
             ISPIEVDAVLL+HPD++Q VAFGVPD+KYGEEINCA+IPREG+ + EE++  FCKKN+AA
Sbjct:   421 ISPIEVDAVLLTHPDVSQGVAFGVPDEKYGEEINCAVIPREGTTVTEEDIKAFCKKNLAA 480

Query:   480 FKVPKRVFITNELPKTASGKIQRRIVSEHFL 510
             FKVPKRVFIT+ LPKTASGKIQRRIV++HFL
Sbjct:   481 FKVPKRVFITDNLPKTASGKIQRRIVAQHFL 511




GO:0005739 "mitochondrion" evidence=ISM
GO:0016208 "AMP binding" evidence=ISS
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0009507 "chloroplast" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005737 "cytoplasm" evidence=IDA
GO:0010030 "positive regulation of seed germination" evidence=IMP
GO:0010214 "seed coat development" evidence=IMP
GO:0033611 "oxalate catabolic process" evidence=IDA
GO:0050203 "oxalate-CoA ligase activity" evidence=IDA
GO:0050832 "defense response to fungus" evidence=IMP
GO:0010167 "response to nitrate" evidence=RCA
GO:0015706 "nitrate transport" evidence=RCA
GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA
POMBASE|SPCC1827.03c SPCC1827.03c "acetyl-CoA ligase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0279561 DDB_G0279561 "AMP-dependent synthetase and ligase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|G4N0E5 MGG_06199 "Peroxisomal-coenzyme A synthetase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
ASPGD|ASPL0000073499 fatD [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
SGD|S000000426 PCS60 "Peroxisomal protein that binds AMP and mRNA" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4763 BA_4763 "long-chain-fatty-acid--CoA ligase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_0437 CHY_0437 "long-chain-fatty-acid--CoA ligase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1731 CHY_1731 "long-chain-fatty-acid--CoA ligase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|BA_1091 BA_1091 "long-chain-fatty-acid--CoA ligase, putative" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A7ZVY7CAIC_ECOHS6, ., 2, ., 1, ., -0.31600.93300.9439yesno
B7L4G0CAIC_ECO556, ., 2, ., 1, ., -0.31600.93300.9439yesno
Q57TJ0CAIC_SALCH6, ., 2, ., 1, ., -0.32310.88140.8916yesno
Q9SMT74CLLA_ARATH6, ., 2, ., 1, ., -0.80700.97890.9961yesno
B5R1R0CAIC_SALEP6, ., 2, ., 1, ., -0.32300.88710.8974yesno
Q5PIL0CAIC_SALPA6, ., 2, ., 1, ., -0.33120.88140.8916yesno
A7ZHC8CAIC_ECO246, ., 2, ., 1, ., -0.31600.93300.9439yesno
Q0K844SAUT_CUPNH6, ., 2, ., 1, ., -0.36060.85850.8821yesno
B5YYD1CAIC_ECO5E6, ., 2, ., 1, ., -0.31220.93300.9439yesno
B5FHG5CAIC_SALDC6, ., 2, ., 1, ., -0.32710.88140.8916yesno
B7M0D4CAIC_ECO8A6, ., 2, ., 1, ., -0.31600.93300.9439yesno
Q8ZRX4CAIC_SALTY6, ., 2, ., 1, ., -0.32710.88710.8974yesno
B7LWM8CAIC_ESCF36, ., 2, ., 1, ., -0.31600.93300.9439yesno
B1IRD9CAIC_ECOLC6, ., 2, ., 1, ., -0.31930.93110.9419yesno
Q83MG9CAIC_SHIFL6, ., 2, ., 1, ., -0.31600.93300.9439yesno
C0Q4L3CAIC_SALPC6, ., 2, ., 1, ., -0.32310.88140.8916yesno
B7MNP4CAIC_ECO816, ., 2, ., 1, ., -0.31800.93300.9439yesno
B7UI83CAIC_ECO276, ., 2, ., 1, ., -0.30750.94260.9535yesno
B4T6J6CAIC_SALNS6, ., 2, ., 1, ., -0.32920.88140.8916yesno
B6HYY8CAIC_ECOSE6, ., 2, ., 1, ., -0.31350.93110.9419yesno
B4EY25CAIC_PROMH6, ., 2, ., 1, ., -0.31460.93110.9401yesno
P38137FAT2_YEAST6, ., -, ., -, ., -0.46250.85080.8195yesno
Q8FLA5CAIC_ECOL66, ., 2, ., 1, ., -0.31330.94260.9535yesno
B4TWR4CAIC_SALSV6, ., 2, ., 1, ., -0.32920.88140.8916yesno
B5BL55CAIC_SALPK6, ., 2, ., 1, ., -0.33120.88140.8916yesno
B5F750CAIC_SALA46, ., 2, ., 1, ., -0.32230.89100.9013yesno
B4TIH0CAIC_SALHS6, ., 2, ., 1, ., -0.32710.88710.8974yesno
Q3Z5X2CAIC_SHISS6, ., 2, ., 1, ., -0.31600.93300.9439yesno
A8ALR6CAIC_CITK86, ., 2, ., 1, ., -0.32090.88710.8974yesno
O74976FAT2_SCHPO6, ., -, ., -, ., -0.49020.95020.9707yesno
O07610LCFB_BACSU6, ., 2, ., 1, ., 30.30840.93300.9512yesno
A9MYJ6CAIC_SALPB6, ., 2, ., 1, ., -0.32440.88520.8955yesno
B1LFX0CAIC_ECOSM6, ., 2, ., 1, ., -0.31530.93690.9477yesno
B7N7R2CAIC_ECOLU6, ., 2, ., 1, ., -0.31600.93300.9439yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.2.10.766
4th Layer6.2.1.7LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00009148001
SubName- Full=Chromosome undetermined scaffold_222, whole genome shotgun sequence; (523 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query523
cd05926345 cd05926, FACL_fum10p_like, Subfamily of fatty acid 0.0
COG0318534 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/ 1e-153
cd05936468 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain 1e-142
PRK05852534 PRK05852, PRK05852, acyl-CoA synthetase; Validated 1e-133
cd05917347 cd05917, FACL_like_2, Uncharacterized subfamily of 1e-123
PRK06187521 PRK06187, PRK06187, long-chain-fatty-acid--CoA lig 1e-120
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 1e-118
pfam00501412 pfam00501, AMP-binding, AMP-binding enzyme 1e-117
cd04433338 cd04433, AFD_class_I, Adenylate forming domain, Cl 1e-117
PRK07656513 PRK07656, PRK07656, long-chain-fatty-acid--CoA lig 1e-116
cd05941430 cd05941, MCS, Malonyl-CoA synthetase (MCS) 1e-113
cd05929342 cd05929, BACL_like, Bacterial Bile acid CoA ligase 1e-111
cd05911487 cd05911, Firefly_Luc_like, Firefly luciferase of l 1e-105
cd05904504 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) 1e-105
cd05903437 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA li 1e-102
cd05935430 cd05935, LC_FACS_like, Putative long-chain fatty a 2e-98
PRK08316523 PRK08316, PRK08316, acyl-CoA synthetase; Validated 2e-95
cd05912407 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase 4e-95
PRK03640483 PRK03640, PRK03640, O-succinylbenzoic acid--CoA li 3e-94
cd05920483 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP l 2e-91
COG0365528 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fat 1e-90
PRK05605573 PRK05605, PRK05605, long-chain-fatty-acid--CoA lig 2e-90
PRK06839496 PRK06839, PRK06839, acyl-CoA synthetase; Validated 4e-88
cd05959506 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 7e-88
PRK07514504 PRK07514, PRK07514, malonyl-CoA synthase; Validate 1e-85
cd05922350 cd05922, FACL_like_6, Uncharacterized subfamily of 5e-85
cd05907456 cd05907, VL_LC_FACS_like, Long-chain fatty acid Co 1e-82
cd12118520 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synt 5e-81
PRK08008517 PRK08008, caiC, putative crotonobetaine/carnitine- 3e-80
PRK07529632 PRK07529, PRK07529, AMP-binding domain protein; Va 1e-78
PRK08314546 PRK08314, PRK08314, long-chain-fatty-acid--CoA lig 2e-78
TIGR01923436 TIGR01923, menE, O-succinylbenzoate-CoA ligase 6e-78
cd12119517 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synth 8e-78
PLN02246537 PLN02246, PLN02246, 4-coumarate--CoA ligase 2e-77
PRK07470528 PRK07470, PRK07470, acyl-CoA synthetase; Validated 2e-77
cd05919436 cd05919, BCL_like, Benzoate CoA ligase (BCL) and s 2e-77
PRK06710563 PRK06710, PRK06710, long-chain-fatty-acid--CoA lig 2e-76
PRK08315559 PRK08315, PRK08315, AMP-binding domain protein; Va 6e-76
PRK06145497 PRK06145, PRK06145, acyl-CoA synthetase; Validated 2e-75
PRK12583558 PRK12583, PRK12583, acyl-CoA synthetase; Provision 2e-75
PRK06087547 PRK06087, PRK06087, short chain acyl-CoA synthetas 2e-75
cd05944359 cd05944, FACL_like_4, Uncharacterized subfamily of 6e-73
PRK13295547 PRK13295, PRK13295, cyclohexanecarboxylate-CoA lig 1e-71
PRK08276502 PRK08276, PRK08276, long-chain-fatty-acid--CoA lig 5e-70
PRK07787471 PRK07787, PRK07787, acyl-CoA synthetase; Validated 2e-69
PRK09088488 PRK09088, PRK09088, acyl-CoA synthetase; Validated 2e-69
PRK06155542 PRK06155, PRK06155, crotonobetaine/carnitine-CoA l 2e-69
PRK07786542 PRK07786, PRK07786, long-chain-fatty-acid--CoA lig 3e-69
cd05931547 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) 1e-66
COG1022613 COG1022, FAA1, Long-chain acyl-CoA synthetases (AM 1e-66
TIGR03098517 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-form 2e-66
PRK06188524 PRK06188, PRK06188, acyl-CoA synthetase; Validated 2e-66
PRK12406509 PRK12406, PRK12406, long-chain-fatty-acid--CoA lig 2e-66
cd05971439 cd05971, MACS_like_3, Uncharacterized subfamily of 3e-66
cd05972430 cd05972, MACS_like, Medium-chain acyl-CoA syntheta 5e-65
PRK05677562 PRK05677, PRK05677, long-chain-fatty-acid--CoA lig 3e-64
TIGR03208538 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate 3e-63
cd05973440 cd05973, MACS_like_2, Uncharacterized subfamily of 5e-63
COG1021542 COG1021, EntE, Peptide arylation enzymes [Secondar 8e-62
cd05945447 cd05945, DltA, D-alanine:D-alanyl carrier protein 8e-62
cd05969443 cd05969, MACS_like_4, Uncharacterized subfamily of 8e-61
PRK08162545 PRK08162, PRK08162, acyl-CoA synthetase; Validated 8e-61
PRK07059557 PRK07059, PRK07059, Long-chain-fatty-acid--CoA lig 9e-61
PLN02574560 PLN02574, PLN02574, 4-coumarate--CoA ligase-like 2e-60
PRK06178567 PRK06178, PRK06178, acyl-CoA synthetase; Validated 4e-60
PRK07788549 PRK07788, PRK07788, acyl-CoA synthetase; Validated 3e-59
TIGR02275526 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP 4e-59
PRK04319570 PRK04319, PRK04319, acetyl-CoA synthetase; Provisi 1e-58
PRK08974560 PRK08974, PRK08974, long-chain-fatty-acid--CoA lig 3e-58
TIGR03205541 TIGR03205, pimA, dicarboxylate--CoA ligase PimA 4e-57
TIGR01733409 TIGR01733, AA-adenyl-dom, amino acid adenylation d 5e-56
PLN02330546 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 8e-56
cd05970537 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA s 2e-55
PRK08751560 PRK08751, PRK08751, putative long-chain fatty acyl 4e-55
cd05930445 cd05930, A_NRPS, The adenylation domain of nonribo 4e-55
cd05909489 cd05909, AAS_C, C-terminal domain of the acyl-acyl 7e-55
TIGR02262508 TIGR02262, benz_CoA_lig, benzoate-CoA ligase famil 8e-55
cd05927539 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty 1e-53
cd05923495 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) 6e-53
PRK12492562 PRK12492, PRK12492, long-chain-fatty-acid--CoA lig 1e-52
cd05940444 cd05940, FATP_FACS, Fatty acid transport proteins 2e-52
cd05932504 cd05932, LC_FACS_bac, Bacterial long-chain fatty a 6e-51
PRK07867529 PRK07867, PRK07867, acyl-CoA synthetase; Validated 8e-51
cd12114476 cd12114, A_NRPS_TlmIV_like, The adenylation domain 1e-50
cd05967607 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) 1e-50
PRK07798533 PRK07798, PRK07798, acyl-CoA synthetase; Validated 1e-50
PLN02860563 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase 1e-49
cd05974433 cd05974, MACS_like_1, Uncharacterized subfamily of 3e-49
PRK13388540 PRK13388, PRK13388, acyl-CoA synthetase; Provision 4e-48
cd12117474 cd12117, A_NRPS_Srf_like, The adenylation domain o 6e-48
cd05918447 cd05918, A_NRPS_SidN3_like, The adenylation (A) do 6e-48
PRK13382537 PRK13382, PRK13382, acyl-CoA synthetase; Provision 6e-48
PRK10946536 PRK10946, entE, enterobactin synthase subunit E; P 7e-48
PRK06018542 PRK06018, PRK06018, putative acyl-CoA synthetase; 1e-47
cd05966602 cd05966, ACS, Acetyl-CoA synthetase (also known as 3e-47
PRK13391511 PRK13391, PRK13391, acyl-CoA synthetase; Provision 6e-47
PRK06164540 PRK06164, PRK06164, acyl-CoA synthetase; Validated 1e-46
cd05968474 cd05968, AACS_like, Uncharacterized acyl-CoA synth 6e-45
PRK07008539 PRK07008, PRK07008, long-chain-fatty-acid--CoA lig 7e-45
TIGR02188625 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase 7e-45
PLN03102579 PLN03102, PLN03102, acyl-activating enzyme; Provis 2e-44
cd05906560 cd05906, A_NRPS_TubE_like, The adenylation domain 2e-44
PLN02479567 PLN02479, PLN02479, acetate-CoA ligase 3e-44
cd12116438 cd12116, A_NRPS_Ta1_like, The adenylation domain o 3e-42
cd12115449 cd12115, A_NRPS_Sfm_like, The adenylation domain o 5e-41
PRK07638487 PRK07638, PRK07638, acyl-CoA synthetase; Validated 6e-41
cd05958487 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) 7e-41
cd05928530 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-Co 2e-40
PRK13390501 PRK13390, PRK13390, acyl-CoA synthetase; Provision 6e-40
PRK086331146 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanola 1e-39
COG1020642 COG1020, EntF, Non-ribosomal peptide synthetase mo 1e-39
PRK13383516 PRK13383, PRK13383, acyl-CoA synthetase; Provision 3e-39
cd05924365 cd05924, FACL_like_5, Uncharacterized subfamily of 1e-37
PRK08279600 PRK08279, PRK08279, long-chain-acyl-CoA synthetase 2e-37
cd05908499 cd05908, A_NRPS_MycA_like, The adenylation domain 4e-37
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 9e-36
cd05914448 cd05914, FACL_like_3, Uncharacterized subfamily of 1e-35
PRK09192579 PRK09192, PRK09192, acyl-CoA synthetase; Validated 1e-34
cd05915509 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetase 2e-33
cd05937468 cd05937, FATP_chFAT1_like, Uncharacterized subfami 4e-33
PRK123165163 PRK12316, PRK12316, peptide synthase; Provisional 1e-32
PLN02654666 PLN02654, PLN02654, acetate-CoA ligase 1e-32
cd05910455 cd05910, FACL_like_1, Uncharacterized subfamily of 2e-32
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 5e-32
PRK07768545 PRK07768, PRK07768, long-chain-fatty-acid--CoA lig 7e-32
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 2e-31
PLN02736651 PLN02736, PLN02736, long-chain acyl-CoA synthetase 5e-31
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 1e-30
PRK07445452 PRK07445, PRK07445, O-succinylbenzoic acid--CoA li 5e-30
PRK10252 1296 PRK10252, entF, enterobactin synthase subunit F; P 9e-30
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 2e-29
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 1e-28
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 2e-28
PRK07824358 PRK07824, PRK07824, O-succinylbenzoic acid--CoA li 2e-28
PRK09029458 PRK09029, PRK09029, O-succinylbenzoic acid--CoA li 8e-28
PRK10524629 PRK10524, prpE, propionyl-CoA synthetase; Provisio 2e-27
TIGR02316628 TIGR02316, propion_prpE, propionate--CoA ligase 4e-27
PRK06060 705 PRK06060, PRK06060, acyl-CoA synthetase; Validated 4e-27
PRK00174637 PRK00174, PRK00174, acetyl-CoA synthetase; Provisi 4e-27
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 1e-26
PRK068141140 PRK06814, PRK06814, acylglycerophosphoethanolamine 4e-26
cd05933594 cd05933, ACSBG_like, Bubblegum-like very long-chai 8e-26
PRK08043718 PRK08043, PRK08043, bifunctional acyl-[acyl carrie 1e-25
PRK06334539 PRK06334, PRK06334, long chain fatty acid--[acyl-c 3e-25
cd05921559 cd05921, FCS, Feruloyl-CoA synthetase (FCS) 7e-25
PRK08308414 PRK08308, PRK08308, acyl-CoA synthetase; Validated 8e-24
cd05938535 cd05938, hsFATP2a_ACSVL_like, Fatty acid transport 1e-23
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 2e-23
TIGR01734502 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phospho 4e-23
PLN02387696 PLN02387, PLN02387, long-chain-fatty-acid-CoA liga 1e-22
cd05939474 cd05939, hsFATP4_like, Fatty acid transport protei 1e-22
PRK05857540 PRK05857, PRK05857, acyl-CoA synthetase; Validated 6e-22
PRK09274552 PRK09274, PRK09274, peptide synthase; Provisional 7e-21
PRK05620576 PRK05620, PRK05620, long-chain-fatty-acid--CoA lig 1e-20
PTZ00216700 PTZ00216, PTZ00216, acyl-CoA synthetase; Provision 2e-20
PRK04813503 PRK04813, PRK04813, D-alanine--poly(phosphoribitol 4e-20
PRK08180614 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewe 1e-19
PRK05851525 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-c 3e-18
PLN02861660 PLN02861, PLN02861, long-chain-fatty-acid-CoA liga 3e-18
PRK12476612 PRK12476, PRK12476, putative fatty-acid--CoA ligas 9e-17
PRK12582624 PRK12582, PRK12582, acyl-CoA synthetase; Provision 1e-16
PTZ00237647 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisi 6e-16
PLN02614666 PLN02614, PLN02614, long-chain acyl-CoA synthetase 1e-15
PLN02430660 PLN02430, PLN02430, long-chain-fatty-acid-CoA liga 6e-15
PRK07769631 PRK07769, PRK07769, long-chain-fatty-acid--CoA lig 4e-12
PRK056914334 PRK05691, PRK05691, peptide synthase; Validated 9e-12
PRK05850578 PRK05850, PRK05850, acyl-CoA synthetase; Validated 6e-11
cd05905556 cd05905, Dip2, Disco-interacting protein 2 (Dip2) 7e-10
pfam1319343 pfam13193, DUF4009, Domain of unknown function (DU 8e-09
PLN03051499 PLN03051, PLN03051, acyl-activating enzyme; Provis 6e-08
PRK05850578 PRK05850, PRK05850, acyl-CoA synthetase; Validated 3e-07
PLN03052728 PLN03052, PLN03052, acetate--CoA ligase; Provision 3e-07
cd05943616 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoac 5e-06
PRK00174637 PRK00174, PRK00174, acetyl-CoA synthetase; Provisi 2e-05
TIGR02372386 TIGR02372, 4_coum_CoA_lig, 4-coumarate--CoA ligase 8e-05
PRK03584655 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Pr 9e-05
TIGR03443 1389 TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh 3e-04
TIGR01217652 TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase 4e-04
TIGR03443 1389 TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh 6e-04
cd05943616 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoac 8e-04
PLN03052728 PLN03052, PLN03052, acetate--CoA ligase; Provision 0.001
PTZ00342746 PTZ00342, PTZ00342, acyl-CoA synthetase; Provision 0.001
PRK07868994 PRK07868, PRK07868, acyl-CoA synthetase; Validated 0.001
>gnl|CDD|213292 cd05926, FACL_fum10p_like, Subfamily of fatty acid CoA ligase (FACL) similar to Fum10p of Gibberella moniliformis Back     alignment and domain information
 Score =  572 bits (1476), Expect = 0.0
 Identities = 208/348 (59%), Positives = 249/348 (71%), Gaps = 3/348 (0%)

Query: 160 PSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLA 219
           P D AL LHTSGTT RPKGVPLT  NL AS  NI   +KLT SD  + V+PLFH+HG++ 
Sbjct: 1   PDDPALILHTSGTTGRPKGVPLTHKNLLASARNIAKSHKLTPSDRCLNVMPLFHIHGLIV 60

Query: 220 GLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYP 279
            LL++  AG +V  P   +FSAS FW D+ KY  TWY+AVPTIHQI+L      P    P
Sbjct: 61  SLLATLLAGGSVVCPP--KFSASKFWDDIAKYRVTWYSAVPTIHQILLKTAKPNPGKPPP 118

Query: 280 KLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRP 339
           +LRFIRS SA L P +L RLE+ FG PVLEAY MTEA H ++SNPLP     KPGSVGRP
Sbjct: 119 RLRFIRSASAPLPPAVLDRLEKRFGVPVLEAYGMTEAAHQIASNPLPP-LVRKPGSVGRP 177

Query: 340 VGQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDS 399
            G E+AILD+ G P   G +GE+ IRGPNVT GY NNPEAN+ AF  GWF TGD+GY D 
Sbjct: 178 AGVEVAILDDDGRPLPPGQEGEIVIRGPNVTAGYLNNPEANREAFRDGWFRTGDLGYLDE 237

Query: 400 DGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPR 459
           DGYL L GRIKELINRGGEKISP EV+ VLL HP +A+AV FGVPD+ YGEE+  A++ R
Sbjct: 238 DGYLFLTGRIKELINRGGEKISPREVEEVLLRHPAVAEAVVFGVPDELYGEEVAAAVVLR 297

Query: 460 EGSNIDEEEVLRFCKKNVAAFKVPKRVFITNELPKTASGKIQRRIVSE 507
             S +  EE+  F +K +AAFKVPK++   + LPK A+GKIQRR ++E
Sbjct: 298 ADSKVTIEELRDFARKRLAAFKVPKKILFVDALPKGATGKIQRRKLAE 345


FACL catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, followed by the formation of a fatty acyl-CoA. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Fum10p is a fatty acid CoA ligase involved in the synthesis of fumonisin, a polyketide mycotoxin, in Gibberella moniliformis. Length = 345

>gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|213302 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD Back     alignment and domain information
>gnl|CDD|235625 PRK05852, PRK05852, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213284 cd05917, FACL_like_2, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|235730 PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|215954 pfam00501, AMP-binding, AMP-binding enzyme Back     alignment and domain information
>gnl|CDD|213270 cd04433, AFD_class_I, Adenylate forming domain, Class I Back     alignment and domain information
>gnl|CDD|236072 PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) Back     alignment and domain information
>gnl|CDD|213295 cd05929, BACL_like, Bacterial Bile acid CoA ligases and similar proteins Back     alignment and domain information
>gnl|CDD|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|213272 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|213271 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase) Back     alignment and domain information
>gnl|CDD|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase Back     alignment and domain information
>gnl|CDD|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213280 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE) Back     alignment and domain information
>gnl|CDD|235146 PRK03640, PRK03640, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213287 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|223442 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|235531 PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|168698 PRK06839, PRK06839, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213312 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase) Back     alignment and domain information
>gnl|CDD|181011 PRK07514, PRK07514, malonyl-CoA synthase; Validated Back     alignment and domain information
>gnl|CDD|213289 cd05922, FACL_like_6, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213275 cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases Back     alignment and domain information
>gnl|CDD|213326 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles and Arabidopsis Back     alignment and domain information
>gnl|CDD|181195 PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|236043 PRK07529, PRK07529, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|236235 PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|162605 TIGR01923, menE, O-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|213327 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|215137 PLN02246, PLN02246, 4-coumarate--CoA ligase Back     alignment and domain information
>gnl|CDD|180988 PRK07470, PRK07470, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate forming enzymes Back     alignment and domain information
>gnl|CDD|180666 PRK06710, PRK06710, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|236236 PRK08315, PRK08315, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|102207 PRK06145, PRK06145, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|237145 PRK12583, PRK12583, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|180393 PRK06087, PRK06087, short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|213309 cd05944, FACL_like_4, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|171961 PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|236215 PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|236096 PRK07787, PRK07787, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|181644 PRK09088, PRK09088, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235719 PRK06155, PRK06155, crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|169098 PRK07786, PRK07786, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) Back     alignment and domain information
>gnl|CDD|223953 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|211788 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-forming), exosortase A-associated Back     alignment and domain information
>gnl|CDD|235731 PRK06188, PRK06188, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|183506 PRK12406, PRK12406, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213318 cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|168170 PRK05677, PRK05677, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|132252 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>gnl|CDD|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|223952 COG1021, EntE, Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|213310 cd05945, DltA, D-alanine:D-alanyl carrier protein ligase (DltA) Back     alignment and domain information
>gnl|CDD|213316 cd05969, MACS_like_4, Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS) Back     alignment and domain information
>gnl|CDD|236169 PRK08162, PRK08162, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235923 PRK07059, PRK07059, Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|215312 PLN02574, PLN02574, 4-coumarate--CoA ligase-like Back     alignment and domain information
>gnl|CDD|235724 PRK06178, PRK06178, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236097 PRK07788, PRK07788, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|233807 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|235279 PRK04319, PRK04319, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236359 PRK08974, PRK08974, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|132249 TIGR03205, pimA, dicarboxylate--CoA ligase PimA Back     alignment and domain information
>gnl|CDD|233550 TIGR01733, AA-adenyl-dom, amino acid adenylation domain Back     alignment and domain information
>gnl|CDD|215189 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>gnl|CDD|213317 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA synthetase (MACS) of AAE_MA like Back     alignment and domain information
>gnl|CDD|181546 PRK08751, PRK08751, putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|213277 cd05909, AAS_C, C-terminal domain of the acyl-acyl carrier protein synthetase (also called 2-acylglycerophosphoethanolamine acyltransferase, Aas) Back     alignment and domain information
>gnl|CDD|233803 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family Back     alignment and domain information
>gnl|CDD|213293 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS) Back     alignment and domain information
>gnl|CDD|213290 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) Back     alignment and domain information
>gnl|CDD|171539 PRK12492, PRK12492, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213306 cd05940, FATP_FACS, Fatty acid transport proteins (FATP) play dual roles as fatty acid transporters and its activation enzymes Back     alignment and domain information
>gnl|CDD|213298 cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase Back     alignment and domain information
>gnl|CDD|236120 PRK07867, PRK07867, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes Back     alignment and domain information
>gnl|CDD|213314 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) Back     alignment and domain information
>gnl|CDD|236100 PRK07798, PRK07798, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|215464 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|213321 cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|237374 PRK13388, PRK13388, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213325 cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C) Back     alignment and domain information
>gnl|CDD|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|172019 PRK13382, PRK13382, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236803 PRK10946, entE, enterobactin synthase subunit E; Provisional Back     alignment and domain information
>gnl|CDD|235673 PRK06018, PRK06018, putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213313 cd05966, ACS, Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme) Back     alignment and domain information
>gnl|CDD|184022 PRK13391, PRK13391, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|235722 PRK06164, PRK06164, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213315 cd05968, AACS_like, Uncharacterized acyl-CoA synthetase subfamily similar to Acetoacetyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|235908 PRK07008, PRK07008, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|233770 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase Back     alignment and domain information
>gnl|CDD|215576 PLN03102, PLN03102, acyl-activating enzyme; Provisional Back     alignment and domain information
>gnl|CDD|213274 cd05906, A_NRPS_TubE_like, The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) synthesizing toxins and antitumor agents Back     alignment and domain information
>gnl|CDD|178097 PLN02479, PLN02479, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|213324 cd12116, A_NRPS_Ta1_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including salinosporamide A polyketide synthase Back     alignment and domain information
>gnl|CDD|213323 cd12115, A_NRPS_Sfm_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Saframycin A gene cluster from Streptomyces lavendulae Back     alignment and domain information
>gnl|CDD|236071 PRK07638, PRK07638, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213311 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) Back     alignment and domain information
>gnl|CDD|213294 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|139538 PRK13390, PRK13390, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236315 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|223951 COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|139531 PRK13383, PRK13383, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213291 cd05924, FACL_like_5, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|236217 PRK08279, PRK08279, long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213276 cd05908, A_NRPS_MycA_like, The adenylation domain of nonribosomal peptide synthetases (NRPS) similar to mycosubtilin synthase subunit A (MycA) Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|213282 cd05914, FACL_like_3, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|236403 PRK09192, PRK09192, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213283 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|213303 cd05937, FATP_chFAT1_like, Uncharacterized subfamily of bifunctional fatty acid transporter/very-long-chain acyl-CoA synthetase in fungi Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|215353 PLN02654, PLN02654, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|213278 cd05910, FACL_like_1, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|236091 PRK07768, PRK07768, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|178337 PLN02736, PLN02736, long-chain acyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|236019 PRK07445, PRK07445, O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|236668 PRK10252, entF, enterobactin synthase subunit F; Provisional Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|236108 PRK07824, PRK07824, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|236363 PRK09029, PRK09029, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|182517 PRK10524, prpE, propionyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|131369 TIGR02316, propion_prpE, propionate--CoA ligase Back     alignment and domain information
>gnl|CDD|180374 PRK06060, PRK06060, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|234677 PRK00174, PRK00174, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|235865 PRK06814, PRK06814, acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|213299 cd05933, ACSBG_like, Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS) Back     alignment and domain information
>gnl|CDD|181207 PRK08043, PRK08043, bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|180533 PRK06334, PRK06334, long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|213288 cd05921, FCS, Feruloyl-CoA synthetase (FCS) Back     alignment and domain information
>gnl|CDD|236231 PRK08308, PRK08308, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213304 cd05938, hsFATP2a_ACSVL_like, Fatty acid transport proteins (FATP) including hsFATP2, hsFATP5, and hsFATP6, and similar proteins Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|233551 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>gnl|CDD|215217 PLN02387, PLN02387, long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>gnl|CDD|213305 cd05939, hsFATP4_like, Fatty acid transport proteins (FATP), including FATP4 and FATP1, and similar proteins Back     alignment and domain information
>gnl|CDD|180293 PRK05857, PRK05857, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236443 PRK09274, PRK09274, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|180167 PRK05620, PRK05620, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|240316 PTZ00216, PTZ00216, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|235313 PRK04813, PRK04813, D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>gnl|CDD|236175 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>gnl|CDD|180289 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|178452 PLN02861, PLN02861, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|171527 PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|237144 PRK12582, PRK12582, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|240325 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|166255 PLN02614, PLN02614, long-chain acyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|178049 PLN02430, PLN02430, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|181109 PRK07769, PRK07769, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|235624 PRK05850, PRK05850, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213273 cd05905, Dip2, Disco-interacting protein 2 (Dip2) Back     alignment and domain information
>gnl|CDD|221971 pfam13193, DUF4009, Domain of unknown function (DUF4009) Back     alignment and domain information
>gnl|CDD|215552 PLN03051, PLN03051, acyl-activating enzyme; Provisional Back     alignment and domain information
>gnl|CDD|235624 PRK05850, PRK05850, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|215553 PLN03052, PLN03052, acetate--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213308 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS) Back     alignment and domain information
>gnl|CDD|234677 PRK00174, PRK00174, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|131425 TIGR02372, 4_coum_CoA_lig, 4-coumarate--CoA ligase, photoactive yellow protein activation family Back     alignment and domain information
>gnl|CDD|235134 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase Back     alignment and domain information
>gnl|CDD|233316 TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase Back     alignment and domain information
>gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase Back     alignment and domain information
>gnl|CDD|213308 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS) Back     alignment and domain information
>gnl|CDD|215553 PLN03052, PLN03052, acetate--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|240370 PTZ00342, PTZ00342, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236121 PRK07868, PRK07868, acyl-CoA synthetase; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 523
KOG1176537 consensus Acyl-CoA synthetase [Lipid transport and 100.0
KOG1177596 consensus Long chain fatty acid acyl-CoA ligase [L 100.0
COG0365528 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid l 100.0
COG0318534 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid l 100.0
PRK07788549 acyl-CoA synthetase; Validated 100.0
COG1021542 EntE Peptide arylation enzymes [Secondary metaboli 100.0
PRK07529632 AMP-binding domain protein; Validated 100.0
PTZ00237647 acetyl-CoA synthetase; Provisional 100.0
PLN02654666 acetate-CoA ligase 100.0
PLN02860563 o-succinylbenzoate-CoA ligase 100.0
PRK05852534 acyl-CoA synthetase; Validated 100.0
TIGR02316628 propion_prpE propionate--CoA ligase. This family c 100.0
TIGR02188625 Ac_CoA_lig_AcsA acetate--CoA ligase. This model de 100.0
PRK13295547 cyclohexanecarboxylate-CoA ligase; Reviewed 100.0
PRK06334539 long chain fatty acid--[acyl-carrier-protein] liga 100.0
PRK00174637 acetyl-CoA synthetase; Provisional 100.0
PLN02736651 long-chain acyl-CoA synthetase 100.0
PRK13382537 acyl-CoA synthetase; Provisional 100.0
PRK05677562 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06839496 acyl-CoA synthetase; Validated 100.0
PRK07656513 long-chain-fatty-acid--CoA ligase; Validated 100.0
PLN02574560 4-coumarate--CoA ligase-like 100.0
PLN02246537 4-coumarate--CoA ligase 100.0
PRK06155542 crotonobetaine/carnitine-CoA ligase; Provisional 100.0
PRK04319570 acetyl-CoA synthetase; Provisional 100.0
PRK07470528 acyl-CoA synthetase; Validated 100.0
PRK08314546 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06187521 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK05605573 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08316523 acyl-CoA synthetase; Validated 100.0
PRK10524629 prpE propionyl-CoA synthetase; Provisional 100.0
PLN02614666 long-chain acyl-CoA synthetase 100.0
PRK06060 705 acyl-CoA synthetase; Validated 100.0
PRK07786542 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK09274552 peptide synthase; Provisional 100.0
PRK12583558 acyl-CoA synthetase; Provisional 100.0
PRK08315559 AMP-binding domain protein; Validated 100.0
PRK06145497 acyl-CoA synthetase; Validated 100.0
PRK06087547 short chain acyl-CoA synthetase; Reviewed 100.0
PRK07514504 malonyl-CoA synthase; Validated 100.0
PRK03640483 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK07638487 acyl-CoA synthetase; Validated 100.0
TIGR02275527 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Prot 100.0
PRK06188524 acyl-CoA synthetase; Validated 100.0
PLN03102579 acyl-activating enzyme; Provisional 100.0
PLN02330546 4-coumarate--CoA ligase-like 1 100.0
TIGR03208538 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. 100.0
PRK05857540 acyl-CoA synthetase; Validated 100.0
PLN02861660 long-chain-fatty-acid-CoA ligase 100.0
TIGR01217652 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym 100.0
PRK03584655 acetoacetyl-CoA synthetase; Provisional 100.0
PRK09088488 acyl-CoA synthetase; Validated 100.0
PRK08043718 bifunctional acyl-[acyl carrier protein] synthetas 100.0
PLN03052728 acetate--CoA ligase; Provisional 100.0
PRK08008517 caiC putative crotonobetaine/carnitine-CoA ligase; 100.0
PRK07769631 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07008539 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07867529 acyl-CoA synthetase; Validated 100.0
PRK06164540 acyl-CoA synthetase; Validated 100.0
TIGR03098515 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosor 100.0
PRK06178567 acyl-CoA synthetase; Validated 100.0
PTZ00342746 acyl-CoA synthetase; Provisional 100.0
PRK13388540 acyl-CoA synthetase; Provisional 100.0
PRK10946536 entE enterobactin synthase subunit E; Provisional 100.0
PRK12492562 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK06710563 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 100.0
PRK08279600 long-chain-acyl-CoA synthetase; Validated 100.0
PRK07059557 Long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK05620576 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR03443 1389 alpha_am_amid L-aminoadipate-semialdehyde dehydrog 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK086331146 2-acyl-glycerophospho-ethanolamine acyltransferase 100.0
PRK13383516 acyl-CoA synthetase; Provisional 100.0
PLN02387696 long-chain-fatty-acid-CoA ligase family protein 100.0
PRK06018542 putative acyl-CoA synthetase; Provisional 100.0
PRK12476612 putative fatty-acid--CoA ligase; Provisional 100.0
TIGR02262508 benz_CoA_lig benzoate-CoA ligase family. Character 100.0
PRK05851525 long-chain-fatty-acid--[acyl-carrier-protein] liga 100.0
PRK08180614 feruloyl-CoA synthase; Reviewed 100.0
TIGR03205541 pimA dicarboxylate--CoA ligase PimA. PimA, a membe 100.0
PRK08751560 putative long-chain fatty acyl CoA ligase; Provisi 100.0
PRK08974560 long-chain-fatty-acid--CoA ligase; Validated 100.0
COG1022613 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) 100.0
TIGR01734502 D-ala-DACP-lig D-alanine--poly(phosphoribitol) lig 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PLN02430660 long-chain-fatty-acid-CoA ligase 100.0
PRK07787471 acyl-CoA synthetase; Validated 100.0
PTZ00216700 acyl-CoA synthetase; Provisional 100.0
PRK07798533 acyl-CoA synthetase; Validated 100.0
PRK13390501 acyl-CoA synthetase; Provisional 100.0
KOG1175626 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PLN02479567 acetate-CoA ligase 100.0
PRK04813503 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK08162545 acyl-CoA synthetase; Validated 100.0
PRK07445452 O-succinylbenzoic acid--CoA ligase; Reviewed 100.0
PRK12582624 acyl-CoA synthetase; Provisional 100.0
PRK056914334 peptide synthase; Validated 100.0
PRK13391511 acyl-CoA synthetase; Provisional 100.0
PRK12406509 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK068141140 acylglycerophosphoethanolamine acyltransferase; Pr 100.0
PRK08276502 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK09192579 acyl-CoA synthetase; Validated 100.0
PRK09029458 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK05691 4334 peptide synthase; Validated 100.0
PRK07868994 acyl-CoA synthetase; Validated 100.0
KOG1256691 consensus Long-chain acyl-CoA synthetases (AMP-for 100.0
PRK05850578 acyl-CoA synthetase; Validated 100.0
PLN03051499 acyl-activating enzyme; Provisional 100.0
TIGR01923436 menE O-succinylbenzoate-CoA ligase. This model rep 100.0
KOG1179649 consensus Very long-chain acyl-CoA synthetase/fatt 100.0
PRK07768545 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08308414 acyl-CoA synthetase; Validated 100.0
KOG1180678 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PF00501417 AMP-binding: AMP-binding enzyme; InterPro: IPR0008 100.0
TIGR01733408 AA-adenyl-dom amino acid adenylation domain. This 100.0
PRK07824358 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PTZ00297 1452 pantothenate kinase; Provisional 100.0
COG1020642 EntF Non-ribosomal peptide synthetase modules and 100.0
TIGR02372386 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv 100.0
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 100.0
KOG36281363 consensus Predicted AMP-binding protein [General f 100.0
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 100.0
KOG1178 1032 consensus Non-ribosomal peptide synthetase/alpha-a 100.0
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 99.97
TIGR03089227 conserved hypothetical protein TIGR03089. This pro 99.94
PRK09188365 serine/threonine protein kinase; Provisional 99.86
KOG3628 1363 consensus Predicted AMP-binding protein [General f 99.85
TIGR02304430 aden_form_hyp probable adenylate-forming enzyme. M 99.84
PF1319373 AMP-binding_C: AMP-binding enzyme C-terminal domai 99.31
PF04443365 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR 99.24
PF03321528 GH3: GH3 auxin-responsive promoter; InterPro: IPR0 99.03
PLN02249597 indole-3-acetic acid-amido synthetase 98.48
PLN02247606 indole-3-acetic acid-amido synthetase 98.25
PLN02620612 indole-3-acetic acid-amido synthetase 98.25
PF1453596 AMP-binding_C_2: AMP-binding enzyme C-terminal dom 97.57
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 95.06
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 87.44
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 87.18
TIGR03089227 conserved hypothetical protein TIGR03089. This pro 80.64
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=4.9e-81  Score=609.73  Aligned_cols=493  Identities=38%  Similarity=0.590  Sum_probs=429.6

Q ss_pred             hcCCc-eeEEECC--cccccHHHHHHHHHHHHHHHHHcC--CCCCCEEEEECCCCHHHHHHHHHHHHhcCEEeeCCCCCC
Q 009867           16 QFSSK-RALSVSG--KFDLTYSRIHELVERAASRLVAAG--INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYT   90 (523)
Q Consensus        16 ~~p~~-~a~~~~~--~~~~Ty~el~~~~~~~A~~L~~~g--~~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~l~~~~~   90 (523)
                      .++++ +.++...  ++.+||+|+++++.++|..|.++|  +++||+|++++||++++..+++||+++|+++.+++|.+.
T Consensus        28 ~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~  107 (537)
T KOG1176|consen   28 VYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLT  107 (537)
T ss_pred             ccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccC
Confidence            34444 6666554  379999999999999999999875  789999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhCCceEEEecccchhHHHHHHhhcccccceeeeecCCcccc-----cc-cccccccccccccCCCCCCCeE
Q 009867           91 PDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELT-----LS-LAHSESDTNAISKLTNDPSDVA  164 (523)
Q Consensus        91 ~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~  164 (523)
                      ..++.+.++.+++++++++.+..+.+.................+......     .. ................+.+|++
T Consensus       108 ~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~~  187 (537)
T KOG1176|consen  108 ASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLPDGIRPVSEDDTA  187 (537)
T ss_pred             HHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCCcccccCCCCCeE
Confidence            99999999999999999999999888777655442211111110000000     00 0000000000003445679999


Q ss_pred             EEEEeeCCCCCCcceeechHHHHHHHHHHHHHhccCCCceEEEEcChhhHHHHHHHHHHhhhcCcEEEeCCCCCCChhHH
Q 009867          165 LFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTF  244 (523)
Q Consensus       165 ~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~  244 (523)
                      +++|||||||.||||.+||++++...........++..++.++.+|++|.+|+...+.+.+..|++++...  .+++..+
T Consensus       188 ~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~--~f~~~~~  265 (537)
T KOG1176|consen  188 AILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLR--KFDAELF  265 (537)
T ss_pred             EEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECC--CCCHHHH
Confidence            99999999999999999999999988777777778889999999999999999997777888888888877  7799999


Q ss_pred             HHHHHhcCccEEeechHHHHHHHhcccCCCCCCCCCcceEEeccCCCCHHHHHHHHHHhC-CceeccccccccccccccC
Q 009867          245 WQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFG-APVLEAYAMTEATHLMSSN  323 (523)
Q Consensus       245 ~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~-~~v~~~yG~tE~~~~~~~~  323 (523)
                      ++.+++|++|++.++|.++..+++.+. ....++++++.+.+||++++++..+++.+.++ ..+.+.||+||+++.++.+
T Consensus       266 ~~~i~kykvt~~~~vP~~~~~l~~~p~-~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~  344 (537)
T KOG1176|consen  266 LDLIEKYKVTHLFLVPPVLNMLAKSPI-VKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSN  344 (537)
T ss_pred             HHHHHHhCEEEEEcChHHHHHHhcCCc-cCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeec
Confidence            999999999999999999999999873 33467999999999999999999999999997 8899999999999888888


Q ss_pred             CCCCCCCCCCCCcccc-CCcEEEEECCCCCccCCCceeEEEEeCCCcccccCCChhhhhhhccC-CeeeeCceeeEcCCC
Q 009867          324 PLPEDGPHKPGSVGRP-VGQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLF-GWFHTGDIGYFDSDG  401 (523)
Q Consensus       324 ~~~~~~~~~~~~~g~~-~~~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-~~~~TGD~~~~~~~g  401 (523)
                      ...+.  ...+++|++ ++..+.+.+++|+.++.++.||||++|+.++.||+++|+.|++.|.+ |||+|||+|++|+||
T Consensus       345 ~~~~e--~k~~svG~~~~g~~~~v~~e~g~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG  422 (537)
T KOG1176|consen  345 DWGPE--RKPGSVGRLLPGVRVKVLDETGVSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDG  422 (537)
T ss_pred             CCCcc--CcccccCccccceEEEeeCCCCCCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCC
Confidence            75443  578999999 58889999999999999999999999999999999999999999976 999999999999999


Q ss_pred             cEEEecccccceecCCcccChHHHHHHHhcCCCceeeEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCcCCC
Q 009867          402 YLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPREGSNIDEEEVLRFCKKNVAAFK  481 (523)
Q Consensus       402 ~~~~~GR~~~~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~  481 (523)
                      ++++.+|++|+||.+|++|+|.|||++|.+||.|.|++||+.+++..|+.+.++|+.+++...+++++.+++++++++|+
T Consensus       423 ~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~lte~di~~~v~k~l~~y~  502 (537)
T KOG1176|consen  423 YLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGSTLTEKDIIEYVRKKLPAYK  502 (537)
T ss_pred             eEEEecchhhheeeCCEEeCHHHHHHHHHhCCCccEEEEEcccccccCCcceEEEEecCCCcCCHHHHHHHHHhhCChhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcEEEEeCCcCCCCCccccHHHHHHHHHHhh
Q 009867          482 VPKRVFITNELPKTASGKIQRRIVSEHFLAQV  513 (523)
Q Consensus       482 ~p~~i~~~~~lp~t~~GK~~r~~l~~~~~~~~  513 (523)
                      +|..++++++||+|++||++|+.|++++.+.-
T Consensus       503 ~~~~V~Fvd~lPKs~~GKi~R~~lr~~~~~~~  534 (537)
T KOG1176|consen  503 LPGGVVFVDELPKTPNGKILRRKLRDIAKKLG  534 (537)
T ss_pred             ccCeEEEeccCCCCCcchHHHHHHHHHHHhcc
Confidence            99999999999999999999999999998753



>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism] Back     alignment and domain information
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK07788 acyl-CoA synthetase; Validated Back     alignment and domain information
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK07529 AMP-binding domain protein; Validated Back     alignment and domain information
>PTZ00237 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02654 acetate-CoA ligase Back     alignment and domain information
>PLN02860 o-succinylbenzoate-CoA ligase Back     alignment and domain information
>PRK05852 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR02316 propion_prpE propionate--CoA ligase Back     alignment and domain information
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase Back     alignment and domain information
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PRK00174 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02736 long-chain acyl-CoA synthetase Back     alignment and domain information
>PRK13382 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06839 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PLN02574 4-coumarate--CoA ligase-like Back     alignment and domain information
>PLN02246 4-coumarate--CoA ligase Back     alignment and domain information
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>PRK04319 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07470 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08316 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK10524 prpE propionyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02614 long-chain acyl-CoA synthetase Back     alignment and domain information
>PRK06060 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK09274 peptide synthase; Provisional Back     alignment and domain information
>PRK12583 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08315 AMP-binding domain protein; Validated Back     alignment and domain information
>PRK06145 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06087 short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>PRK07514 malonyl-CoA synthase; Validated Back     alignment and domain information
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK07638 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>PRK06188 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN03102 acyl-activating enzyme; Provisional Back     alignment and domain information
>PLN02330 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>PRK05857 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02861 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase Back     alignment and domain information
>PRK03584 acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK09088 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>PLN03052 acetate--CoA ligase; Provisional Back     alignment and domain information
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07867 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06164 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated Back     alignment and domain information
>PRK06178 acyl-CoA synthetase; Validated Back     alignment and domain information
>PTZ00342 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK13388 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK10946 entE enterobactin synthase subunit E; Provisional Back     alignment and domain information
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>PRK08279 long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK13383 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02387 long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>PRK06018 putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK12476 putative fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family Back     alignment and domain information
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PRK08180 feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>TIGR03205 pimA dicarboxylate--CoA ligase PimA Back     alignment and domain information
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PLN02430 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PRK07787 acyl-CoA synthetase; Validated Back     alignment and domain information
>PTZ00216 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07798 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK13390 acyl-CoA synthetase; Provisional Back     alignment and domain information
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PLN02479 acetate-CoA ligase Back     alignment and domain information
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK08162 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>PRK12582 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK13391 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK09192 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK07868 acyl-CoA synthetase; Validated Back     alignment and domain information
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism] Back     alignment and domain information
>PRK05850 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN03051 acyl-activating enzyme; Provisional Back     alignment and domain information
>TIGR01923 menE O-succinylbenzoate-CoA ligase Back     alignment and domain information
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism] Back     alignment and domain information
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08308 acyl-CoA synthetase; Validated Back     alignment and domain information
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ] Back     alignment and domain information
>TIGR01733 AA-adenyl-dom amino acid adenylation domain Back     alignment and domain information
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>TIGR03089 conserved hypothetical protein TIGR03089 Back     alignment and domain information
>PRK09188 serine/threonine protein kinase; Provisional Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme Back     alignment and domain information
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B Back     alignment and domain information
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria Back     alignment and domain information
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin Back     alignment and domain information
>PLN02249 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02247 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02620 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>TIGR03089 conserved hypothetical protein TIGR03089 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query523
3r44_A517 Mycobacterium Tuberculosis Fatty Acyl Coa Synthetas 5e-57
4fuq_A503 Crystal Structure Of Apo Matb From Rhodopseudomonas 1e-51
3ivr_A509 Crystal Structure Of Putative Long-Chain-Fatty-Acid 7e-49
4fut_A503 Crystal Structure Of Atp Bound Matb From Rhodopseud 2e-44
3a9u_A536 Crystal Structures And Enzymatic Mechanisms Of A Po 4e-44
4gxq_A506 Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimer 2e-41
3g7s_A549 Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Li 3e-41
4gxr_A503 Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Len 8e-41
3qya_A582 Crystal Structure Of A Red-Emitter Mutant Of Lampyr 4e-39
2d1s_A548 Crystal Structure Of The Thermostable Japanese Fire 4e-39
2d1q_A548 Crystal Structure Of The Thermostable Japanese Fire 5e-39
3tsy_A 979 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr 6e-39
2d1t_A548 Crystal Structure Of The Thermostable Japanese Fire 7e-39
3nyq_A505 Malonyl-Coa Ligase Ternary Product Complex With Met 7e-38
1ba3_A550 Firefly Luciferase In Complex With Bromoform Length 9e-36
3iep_A551 Firefly Luciferase Apo Structure (P41 Form) Length 9e-36
4g36_A555 Photinus Pyralis Luciferase In The Adenylate-Formin 1e-35
4g37_A555 Structure Of Cross-Linked Firefly Luciferase In Sec 2e-35
2v7b_A529 Crystal Structures Of A Benzoate Coa Ligase From Bu 2e-35
1ult_A541 Crystal Structure Of Tt0168 From Thermus Thermophil 3e-34
3t5b_A396 Crystal Structure Of N-Terminal Domain Of Facl13 Fr 8e-34
3rg2_A617 Structure Of A Two-Domain Nrps Fusion Protein Conta 1e-33
3o82_A544 Structure Of Base N-Terminal Domain From Acinetobac 2e-33
3etc_A580 2.1 A Structure Of Acyl-Adenylate Synthetase From M 4e-33
2p2f_A652 Acetyl-coa Synthetase, Wild-type With Acetate, Amp, 2e-29
2p2b_A652 Acetyl-coa Synthetase, V386a Mutation Length = 652 2e-29
2p2m_A652 Acetyl-Coa Synthetase, R194a Mutation Length = 652 2e-29
1pg3_A652 Acetyl Coa Synthetase, Acetylated On Lys609 Length 2e-29
2p2q_A652 Acetyl-Coa Synthetase, R584e Mutation Length = 652 3e-29
2qvz_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303A MUTATIO 5e-29
2p20_A652 Acetyl-Coa Synthetase, R584a Mutation Length = 652 6e-29
3ipl_A501 Crystal Structure Of O-Succinylbenzoic Acid-Coa Lig 9e-29
2p2j_A652 Acetyl-Coa Synthetase, K609a Mutation Length = 652 9e-29
1mdb_A539 Crystal Structure Of Dhbe In Complex With Dhb-adeny 1e-28
3cw8_X504 4-chlorobenzoyl-coa Ligase/synthetase, Bound To 4cb 1e-28
2qvx_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303G MUTATIO 2e-28
1t5d_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE BOUND TO 4-Chl 2e-28
3dlp_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, MUTANT D402P, 3e-28
1t5h_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE UNLIGANDED, SE 5e-27
1md9_A539 Crystal Structure Of Dhbe In Complex With Dhb And A 1e-26
1ry2_A663 Crystal Structure Of Yeast Acetyl-Coenzyme A Synthe 3e-24
3b7w_A570 Crystal Structure Of Human Acyl-Coa Synthetase Medi 1e-21
2wd9_A569 Crystal Structure Of Human Acyl-coa Synthetase Medi 1e-21
1amu_A563 Phenylalanine Activating Domain Of Gramicidin Synth 3e-20
3e7w_A511 Crystal Structure Of Dlta: Implications For The Rea 2e-17
3pbk_A583 Structural And Functional Studies Of Fatty Acyl-Ade 5e-17
2vsq_A 1304 Structure Of Surfactin A Synthetase C (Srfa-C), A N 7e-17
4gr5_A570 Crystal Structure Of Slgn1deltaasub In Complex With 2e-14
3vnq_A544 Co-crystal Structure Of Nrps Adenylation Protein Cy 2e-14
3l8c_A521 Structure Of Probable D-Alanine--Poly(Phosphoribito 5e-14
3fcc_A512 Crystal Structure Of Dlta Protein In Complex With A 4e-13
3dhv_A512 Crystal Structure Of Dlta Protein In Complex With D 4e-13
3kxw_A590 The Crystal Structure Of Fatty Acid Amp Ligase From 2e-10
4gr4_A469 Crystal Structure Of Slgn1deltaasub Length = 469 9e-07
3ite_A562 The Third Adenylation Domain Of The Fungal Sidn Non 1e-05
4dg8_A620 Structure Of Pa1221, An Nrps Protein Containing Ade 4e-05
>pdb|3R44|A Chain A, Mycobacterium Tuberculosis Fatty Acyl Coa Synthetase Length = 517 Back     alignment and structure

Iteration: 1

Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 148/489 (30%), Positives = 244/489 (49%), Gaps = 23/489 (4%) Query: 31 LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRXXXXXXXXXXXYT 90 +TY++++ L R A L A GI GD VAL PN+VEF +F + Sbjct: 44 MTYAQMNALANRCADVLTALGIAKGDRVALLMPNSVEFCCLFYGAAKLGAVAVPINTRLA 103 Query: 91 PDEFEFYLSDSESKLLLTPAEGNXXXXXXXSKLNISHATATLLDADSELTLSLAHSESDT 150 E F LSDS SK+++ A ++ + + ADS L L + +D Sbjct: 104 APEVSFILSDSGSKVVIYGAPSAPVIDAIRAQADPPGTVTDWIGADS-LAERLRSAAADE 162 Query: 151 NAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLP 210 A+ +D ++TSGTT PKGV T ++ ++ S+ S + D ++ LP Sbjct: 163 PAVECGGDDN---LFIMYTSGTTGHPKGVVHTHESVHSAASSWASTIDVRYRDRLLLPLP 219 Query: 211 LFHVHGMXXXXXXXXXXXXXXXXXXXGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRH 270 +FHV + +F A+ W +++ AVP I + R Sbjct: 220 MFHVAALTTVIFSAMRGVTLISMP---QFDATKVWSLIVEERVCIGGAVPAILNFM--RQ 274 Query: 271 VAK-PEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEA----THLMSSNPL 325 V + E P R+ + A + P L ++ A V++ YA+TE+ T L+S Sbjct: 275 VPEFAELDAPDFRYFITGGAPM-PEALIKIYAAKNIEVVQGYALTESCGGGTLLLS---- 329 Query: 326 PEDGPHKPGSVGRP-VGQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF 384 ED K GS GR + ++A+ + GV +E G +GEV I+ + K Y N PEA + AF Sbjct: 330 -EDALRKAGSAGRATMFTDVAVRGDDGVIREHG-EGEVVIKSDILLKEYWNRPEATRDAF 387 Query: 385 LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVP 444 GWF TGDIG D +GYL++ R+K++I GGE + P E+++V++ P +++ G+P Sbjct: 388 DNGWFRTGDIGEIDDEGYLYIKDRLKDMIISGGENVYPAEIESVIIGVPGVSEVAVIGLP 447 Query: 445 DDKYGEEINCAIIPREGSNIDEEEVLRFCKKNVAAFKVPKRVFITNELPKTASGKIQRRI 504 D+K+G EI AI+ + + + E++++ +C +A +K+PK+V +P+ +GKI + + Sbjct: 448 DEKWG-EIAAAIVVADQNEVSEQQIVEYCGTRLARYKLPKKVIFAEAIPRNPTGKILKTV 506 Query: 505 VSEHFLAQV 513 + E + A V Sbjct: 507 LREQYSATV 515
>pdb|4FUQ|A Chain A, Crystal Structure Of Apo Matb From Rhodopseudomonas Palustris Length = 503 Back     alignment and structure
>pdb|3IVR|A Chain A, Crystal Structure Of Putative Long-Chain-Fatty-Acid Coa Ligase From Rhodopseudomonas Palustris Cga009 Length = 509 Back     alignment and structure
>pdb|4FUT|A Chain A, Crystal Structure Of Atp Bound Matb From Rhodopseudomonas Palustris Length = 503 Back     alignment and structure
>pdb|3A9U|A Chain A, Crystal Structures And Enzymatic Mechanisms Of A Populus Tomentosa 4- Coumarate--Coa Ligase Length = 536 Back     alignment and structure
>pdb|4GXQ|A Chain A, Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimera B1 Length = 506 Back     alignment and structure
>pdb|3G7S|A Chain A, Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Ligase (Fadd1) From Archaeoglobus Fulgidus Length = 549 Back     alignment and structure
>pdb|4GXR|A Chain A, Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Length = 503 Back     alignment and structure
>pdb|3QYA|A Chain A, Crystal Structure Of A Red-Emitter Mutant Of Lampyris Turkestanicus Luciferase Length = 582 Back     alignment and structure
>pdb|2D1S|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Complexed With High-Energy Intermediate Analogue Length = 548 Back     alignment and structure
>pdb|2D1Q|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Complexed With Mgatp Length = 548 Back     alignment and structure
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 Back     alignment and structure
>pdb|2D1T|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Red-Color Emission S286n Mutant Complexed With High-Energy Intermediate Analogue Length = 548 Back     alignment and structure
>pdb|3NYQ|A Chain A, Malonyl-Coa Ligase Ternary Product Complex With Methylmalonyl-Coa And Amp Bound Length = 505 Back     alignment and structure
>pdb|1BA3|A Chain A, Firefly Luciferase In Complex With Bromoform Length = 550 Back     alignment and structure
>pdb|3IEP|A Chain A, Firefly Luciferase Apo Structure (P41 Form) Length = 551 Back     alignment and structure
>pdb|4G36|A Chain A, Photinus Pyralis Luciferase In The Adenylate-Forming Conformation Bound To Dlsa Length = 555 Back     alignment and structure
>pdb|4G37|A Chain A, Structure Of Cross-Linked Firefly Luciferase In Second Catalytic Conformation Length = 555 Back     alignment and structure
>pdb|2V7B|A Chain A, Crystal Structures Of A Benzoate Coa Ligase From Burkholderia Xenovorans Lb400 Length = 529 Back     alignment and structure
>pdb|1ULT|A Chain A, Crystal Structure Of Tt0168 From Thermus Thermophilus Hb8 Length = 541 Back     alignment and structure
>pdb|3T5B|A Chain A, Crystal Structure Of N-Terminal Domain Of Facl13 From Mycobacterium Tuberculosis Length = 396 Back     alignment and structure
>pdb|3RG2|A Chain A, Structure Of A Two-Domain Nrps Fusion Protein Containing The Ente Adenylation Domain And Entb Aryl-Carrier Protein From Enterobactin Biosynthesis Length = 617 Back     alignment and structure
>pdb|3O82|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter Baumannii Bound To 5'-O-[n-(2,3-Dihydroxybenzoyl)sulfamoyl] Adenosine Length = 544 Back     alignment and structure
>pdb|3ETC|A Chain A, 2.1 A Structure Of Acyl-Adenylate Synthetase From Methanosarcina Acetivorans Containing A Link Between Lys256 And Cys298 Length = 580 Back     alignment and structure
>pdb|2P2F|A Chain A, Acetyl-coa Synthetase, Wild-type With Acetate, Amp, And Coa Bound Length = 652 Back     alignment and structure
>pdb|2P2B|A Chain A, Acetyl-coa Synthetase, V386a Mutation Length = 652 Back     alignment and structure
>pdb|2P2M|A Chain A, Acetyl-Coa Synthetase, R194a Mutation Length = 652 Back     alignment and structure
>pdb|1PG3|A Chain A, Acetyl Coa Synthetase, Acetylated On Lys609 Length = 652 Back     alignment and structure
>pdb|2P2Q|A Chain A, Acetyl-Coa Synthetase, R584e Mutation Length = 652 Back     alignment and structure
>pdb|2QVZ|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303A MUTATION, BOUND TO 3- Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|2P20|A Chain A, Acetyl-Coa Synthetase, R584a Mutation Length = 652 Back     alignment and structure
>pdb|3IPL|A Chain A, Crystal Structure Of O-Succinylbenzoic Acid-Coa Ligase From Staphylococcus Aureus Subsp. Aureus Mu50 Length = 501 Back     alignment and structure
>pdb|2P2J|A Chain A, Acetyl-Coa Synthetase, K609a Mutation Length = 652 Back     alignment and structure
>pdb|1MDB|A Chain A, Crystal Structure Of Dhbe In Complex With Dhb-adenylate Length = 539 Back     alignment and structure
>pdb|3CW8|X Chain X, 4-chlorobenzoyl-coa Ligase/synthetase, Bound To 4cba-adenylate Length = 504 Back     alignment and structure
>pdb|2QVX|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303G MUTATION, BOUND TO 3- Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|1T5D|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE BOUND TO 4-Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|3DLP|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, MUTANT D402P, BOUND To 4cb Length = 504 Back     alignment and structure
>pdb|1T5H|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE UNLIGANDED, SELENOMETHIONINE Length = 504 Back     alignment and structure
>pdb|1MD9|A Chain A, Crystal Structure Of Dhbe In Complex With Dhb And Amp Length = 539 Back     alignment and structure
>pdb|1RY2|A Chain A, Crystal Structure Of Yeast Acetyl-Coenzyme A Synthetase In Complex With Amp Length = 663 Back     alignment and structure
>pdb|3B7W|A Chain A, Crystal Structure Of Human Acyl-Coa Synthetase Medium-Chain Family Member 2a, With L64p Mutation Length = 570 Back     alignment and structure
>pdb|2WD9|A Chain A, Crystal Structure Of Human Acyl-coa Synthetase Medium-chain Family Member 2a (l64p Mutation) In Complex With Ibuprofen Length = 569 Back     alignment and structure
>pdb|1AMU|A Chain A, Phenylalanine Activating Domain Of Gramicidin Synthetase 1 In A Complex With Amp And Phenylalanine Length = 563 Back     alignment and structure
>pdb|3E7W|A Chain A, Crystal Structure Of Dlta: Implications For The Reaction Mechanism Of Non-Ribosomal Peptide Synthetase (Nrps) Adenylation Domains Length = 511 Back     alignment and structure
>pdb|3PBK|A Chain A, Structural And Functional Studies Of Fatty Acyl-Adenylate Ligases From E. Coli And L. Pneumophila Length = 583 Back     alignment and structure
>pdb|2VSQ|A Chain A, Structure Of Surfactin A Synthetase C (Srfa-C), A Nonribosomal Peptide Synthetase Termination Module Length = 1304 Back     alignment and structure
>pdb|4GR5|A Chain A, Crystal Structure Of Slgn1deltaasub In Complex With Ampcpp Length = 570 Back     alignment and structure
>pdb|3VNQ|A Chain A, Co-crystal Structure Of Nrps Adenylation Protein Cytc1 With Atp From Streptomyces Length = 544 Back     alignment and structure
>pdb|3L8C|A Chain A, Structure Of Probable D-Alanine--Poly(Phosphoribitol) Ligase Subunit-1 From Streptococcus Pyogenes Length = 521 Back     alignment and structure
>pdb|3FCC|A Chain A, Crystal Structure Of Dlta Protein In Complex With Atp And Magnesium Length = 512 Back     alignment and structure
>pdb|3DHV|A Chain A, Crystal Structure Of Dlta Protein In Complex With D-Alanine Adenylate Length = 512 Back     alignment and structure
>pdb|3KXW|A Chain A, The Crystal Structure Of Fatty Acid Amp Ligase From Legionella Pneumophila Length = 590 Back     alignment and structure
>pdb|4GR4|A Chain A, Crystal Structure Of Slgn1deltaasub Length = 469 Back     alignment and structure
>pdb|3ITE|A Chain A, The Third Adenylation Domain Of The Fungal Sidn Non- Ribosomal Peptide Synthetase Length = 562 Back     alignment and structure
>pdb|4DG8|A Chain A, Structure Of Pa1221, An Nrps Protein Containing Adenylation And Pcp Domains Length = 620 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query523
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 1e-174
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 1e-168
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 1e-160
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 1e-159
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 1e-158
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 1e-154
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 1e-154
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 1e-153
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 1e-153
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 1e-151
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 1e-149
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 1e-146
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 1e-142
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 1e-140
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 1e-133
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 2e-99
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 5e-96
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 4e-93
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 3e-80
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 3e-72
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 1e-55
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 3e-42
3fce_A512 D-alanine--poly(phosphoribitol) ligase subunit 1; 4e-42
1pg4_A652 Acetyl-COA synthetase; AMP-forming, adenylate-form 3e-41
3l8c_A521 D-alanine--poly(phosphoribitol) ligase subunit 1; 1e-40
1amu_A563 GRSA, gramicidin synthetase 1; peptide synthetase, 4e-40
3e7w_A511 D-alanine--poly(phosphoribitol) ligase subunit 1; 4e-39
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 3e-37
4dg8_A620 PA1221; ANL superfamily, adenylation domain, pepti 6e-34
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 3e-31
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 2e-16
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-09
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 5e-07
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 6e-07
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 2e-06
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Length = 505 Back     alignment and structure
 Score =  500 bits (1290), Expect = e-174
 Identities = 152/508 (29%), Positives = 225/508 (44%), Gaps = 40/508 (7%)

Query: 5   TLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPN 64
               L        + + AL    +  LTY+   EL   A     A  I     VA+    
Sbjct: 24  LFPALSPAPTGAPADRPALRFGER-SLTYA---ELAAAAG--ATAGRIGGAGRVAVWATP 77

Query: 65  TVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLN 124
            +E  +  +A + A   A PLN      E    LSDS   L+L P +        A    
Sbjct: 78  AMETGVAVVAALLAGVAAVPLNPKSGDKELAHILSDSAPSLVLAPPDAELPPALGA---- 133

Query: 125 ISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQN 184
                   +D D     ++    +D            D AL ++TSGTT  PKG  + + 
Sbjct: 134 -----LERVDVDVRARGAVPEDGAD----------DGDPALVVYTSGTTGPPKGAVIPRR 178

Query: 185 NLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTF 244
            LA ++  +   ++ T  D  V  LPLFHVHG++ G+L     G +V     GRFS    
Sbjct: 179 ALATTLDALADAWQWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRH--LGRFSTEGA 236

Query: 245 WQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVY--PKLRFIRSCSASLAPVILSRLEEA 302
               +   AT    VPT++  + +   A PE        R + S SA+L      R+  A
Sbjct: 237 A-RELNDGATMLFGVPTMYHRIAETLPADPELAKALAGARLLVSGSAALPVHDHERIAAA 295

Query: 303 FGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIG---VPQEGGA 358
            G  V+E Y MTE T + +S     DG  + G+VG P+ G E+ +++E G      +G +
Sbjct: 296 TGRRVIERYGMTE-TLMNTSVRA--DGEPRAGTVGVPLPGVELRLVEEDGTPIAALDGES 352

Query: 359 KGEVCIRGPNVTKGYKNNPEANKSAFL-FGWFHTGDIGYFDSDGYLHLVGR-IKELINRG 416
            GE+ +RGPN+   Y N P+A  +AF   G+F TGD+   D DGY+ +VGR   +LI  G
Sbjct: 353 VGEIQVRGPNLFTEYLNRPDATAAAFTEDGFFRTGDMAVRDPDGYVRIVGRKATDLIKSG 412

Query: 417 GEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPRE-GSNIDEEEVLRFCKK 475
           G KI   E++  LL HP++ +A   G PD   GE I   I+P +  +      +      
Sbjct: 413 GYKIGAGEIENALLEHPEVREAAVTGEPDPDLGERIVAWIVPADPAAPPALGTLADHVAA 472

Query: 476 NVAAFKVPKRVFITNELPKTASGKIQRR 503
            +A  K P+ V   + +P+   GKI +R
Sbjct: 473 RLAPHKRPRVVRYLDAVPRNDMGKIMKR 500


>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* Length = 503 Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} Length = 509 Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Length = 517 Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Length = 501 Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} PDB: 3o82_A* 3o84_A* Length = 544 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Length = 617 Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Length = 539 Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Length = 549 Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Length = 504 Back     alignment and structure
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Length = 536 Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Length = 529 Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A 1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A Length = 550 Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Length = 548 Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Length = 570 Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Length = 580 Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Length = 541 Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Length = 1304 Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Length = 512 Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Length = 652 Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Length = 521 Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Length = 563 Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Length = 511 Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Length = 562 Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Length = 620 Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Length = 663 Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Length = 369 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Length = 437 Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Length = 443 Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Length = 436 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query523
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 100.0
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 100.0
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 100.0
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 100.0
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 100.0
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 100.0
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 100.0
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 100.0
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 100.0
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 100.0
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 100.0
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 100.0
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 100.0
1pg4_A652 Acetyl-COA synthetase; AMP-forming, adenylate-form 100.0
3fce_A512 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 100.0
3e7w_A511 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 100.0
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 100.0
1amu_A563 GRSA, gramicidin synthetase 1; peptide synthetase, 100.0
4dg8_A620 PA1221; ANL superfamily, adenylation domain, pepti 100.0
4gr5_A570 Non-ribosomal peptide synthetase; MBTH-like domain 100.0
3l8c_A521 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 100.0
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 100.0
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 100.0
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 100.0
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 100.0
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 100.0
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 100.0
4gs5_A358 Acyl-COA synthetase (AMP-forming)/AMP-acid ligase 100.0
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 100.0
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 99.97
3gxs_A109 Phenylacetate-coenzyme A ligase; APC62324.1, struc 99.51
3lax_A109 Phenylacetate-coenzyme A ligase; structural genomi 99.5
4b2g_A609 GH3-1 auxin conjugating enzyme; signaling protein, 99.09
4eql_A581 4-substituted benzoates-glutamate ligase GH3.12; f 99.06
4epl_A581 Jasmonic acid-amido synthetase JAR1; ANL adenylati 99.04
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 93.07
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 92.14
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 92.07
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 84.35
3rix_A 550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 80.32
3g7s_A 549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 80.31
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Back     alignment and structure
Probab=100.00  E-value=1e-81  Score=642.14  Aligned_cols=503  Identities=31%  Similarity=0.466  Sum_probs=435.3

Q ss_pred             CCCHHHHHHHHHhhcCCceeEEECC-cccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhcCE
Q 009867            3 GVTLIGLLNQVIDQFSSKRALSVSG-KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT   81 (523)
Q Consensus         3 ~~ti~~~l~~~a~~~p~~~a~~~~~-~~~~Ty~el~~~~~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~~   81 (523)
                      .+|+.++|.++++++|+++|+++.+ ++++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|++
T Consensus        21 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~la~~~~Gav  100 (536)
T 3ni2_A           21 NLPLHSYVLENLSNHSSKPCLINGANGDVYTYADVELTARRVASGLNKIGIQQGDVIMLFLPSSPEFVLAFLGASHRGAI  100 (536)
T ss_dssp             SCCHHHHHTTTGGGSTTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCE
T ss_pred             CCcHHHHHHHHhhcCCCceEEEECCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCE
Confidence            4799999999999999999999863 478999999999999999999999999999999999999999999999999999


Q ss_pred             EeeCCCCCCHHHHHHHHhhCCceEEEecccchhHHHHHHhhcccccceeeeecCCcccccccccc-cccccccccCCCCC
Q 009867           82 AAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHS-ESDTNAISKLTNDP  160 (523)
Q Consensus        82 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  160 (523)
                      ++|++|.++.+++.+++++++++++|++......+............   ..+........+.+. .......+.....+
T Consensus       101 ~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (536)
T 3ni2_A          101 ITAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFARESDVKVM---CVDSAPDGCLHFSELTQADENEAPQVDISP  177 (536)
T ss_dssp             EEECCTTCCHHHHHHHHHHHTEEEEEECGGGTHHHHHHHHHHTCEEE---ESSCCCTTCEETHHHHTSCGGGCCCCCCCT
T ss_pred             EeccCCCCCHHHHHHHHHhcCCEEEEEChHHHHHHHHHHhhcCceEE---EecCCCCCccCHHHHhhccccccccCCCCc
Confidence            99999999999999999999999999998877766655444332211   111111111111111 11111222334578


Q ss_pred             CCeEEEEEeeCCCCCCcceeechHHHHHHHHHHHH----HhccCCCceEEEEcChhhHHHHHHHHHHhhhcCcEEEeCCC
Q 009867          161 SDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS----VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAA  236 (523)
Q Consensus       161 ~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~  236 (523)
                      +++++++|||||||.||+|.++|+++.+.+.....    .+++.+++++++.+|++|.+++...++.++..|+++++.+ 
T Consensus       178 ~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v~~~-  256 (536)
T 3ni2_A          178 DDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLYFHSEDVILCVLPMFHIYALNSIMLCGLRVGAPILIMP-  256 (536)
T ss_dssp             TSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHHCSSSCSSCCCTTCCEEECSCTTSHHHHHHTHHHHHHHTCCEEECS-
T ss_pred             cCEEEEEcCCCccccchHHHhhHHHHHHHHHHHHhhccccccCCCCCEEEEecChHHHHHHHHHHHHHHhcCCEEEEcC-
Confidence            99999999999999999999999999887766543    3467889999999999999999887899999999999987 


Q ss_pred             CCCChhHHHHHHHhcCccEEeechHHHHHHHhcccCCCCCCCCCcceEEeccCCCCHHHHHHHHHHh-CCceeccccccc
Q 009867          237 GRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTE  315 (523)
Q Consensus       237 ~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~v~~~yG~tE  315 (523)
                       .+++..+++.++++++|++.++|+++..+++...... ..++++|.+++||+++++++.+.+++.| ++++++.||+||
T Consensus       257 -~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~-~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE  334 (536)
T 3ni2_A          257 -KFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDLDK-HDLSSLRMIKSGGAPLGKELEDTVRAKFPQARLGQGYGMTE  334 (536)
T ss_dssp             -SCCHHHHHHHHHHHTCCEEEECHHHHHHHHTCSCGGG-SCCTTCCEEEEESSCCCHHHHHHHHHHCTTSEEEEEEECGG
T ss_pred             -CCCHHHHHHHHHHhCCeEEEccHHHHHHHHhCccccc-CCCccceEEEECCCCCCHHHHHHHHHHCCCCCccccccccc
Confidence             6789999999999999999999999999988754333 4578999999999999999999999999 899999999999


Q ss_pred             cccccccCCC--CCCCCCCCCCcccc-CCcEEEEEC-CCCCccCCCceeEEEEeCCCcccccCCChhhhhhhc-cCCeee
Q 009867          316 ATHLMSSNPL--PEDGPHKPGSVGRP-VGQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF-LFGWFH  390 (523)
Q Consensus       316 ~~~~~~~~~~--~~~~~~~~~~~g~~-~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~~~~~  390 (523)
                      ++.+++.+..  ........+++|+| ++++++++| ++|.+++.|+.|||+++|++++.||+++++.+++.| .+|||+
T Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~~~~~g~~~  414 (536)
T 3ni2_A          335 AGPVLAMCLAFAKEPFDIKPGACGTVVRNAEMKIVDPETGASLPRNQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWLH  414 (536)
T ss_dssp             GSSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTTCCBCCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEE
T ss_pred             cchhhhcccccCCccccCCCCCeeEeCCCcEEEEEeCCCCcCCCCCCccEEEEeCcccchhhcCChhHHHhhccCCCceE
Confidence            9977654421  12234466789999 799999999 779999999999999999999999999999999999 689999


Q ss_pred             eCceeeEcCCCcEEEecccccceecCCcccChHHHHHHHhcCCCceeeEEEeecCCCCCceeEEEEEeCCCCCCCHHHHH
Q 009867          391 TGDIGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPREGSNIDEEEVL  470 (523)
Q Consensus       391 TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~  470 (523)
                      |||+|++++||.+++.||+||+||++|++|+|.+||++|.++|+|.+++|++.+++..++.++++++..++...+.++++
T Consensus       415 TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~Vv~~~~~~~g~~~~a~vv~~~~~~~~~~~l~  494 (536)
T 3ni2_A          415 TGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVKSEKSQATEDEIK  494 (536)
T ss_dssp             EEEEEEECTTSCEEEEEECSCCEEETTEEECHHHHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHH
T ss_pred             cccEEEEcCCceEEEEecccceEEECCEEECHHHHHHHHHhCCCcceEEEEeeecCCCCceeEEEEEecCCCCCCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999998888999999999888888899999


Q ss_pred             HHHHhcCcCCCCCcEEEEeCCcCCCCCccccHHHHHHHHHH
Q 009867          471 RFCKKNVAAFKVPKRVFITNELPKTASGKIQRRIVSEHFLA  511 (523)
Q Consensus       471 ~~~~~~l~~~~~p~~i~~~~~lp~t~~GK~~r~~l~~~~~~  511 (523)
                      ++++++|+.|++|..++++++||+|++||++|++|++++.+
T Consensus       495 ~~l~~~l~~~~~p~~i~~v~~lP~t~~GKi~R~~L~~~~~~  535 (536)
T 3ni2_A          495 QYISKQVIFYKRIKRVFFIEAIPKAPSGKILRKNLKEKLAG  535 (536)
T ss_dssp             HHHHTTSCGGGCCSEEEECSCCCBCTTSCBCHHHHHTC---
T ss_pred             HHHHHhccCCccccEEEEEecCCCCCCCCeeHHHHHHHhcc
Confidence            99999999999999999999999999999999999988754



>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A* Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0 Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A* Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Back     alignment and structure
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Back     alignment and structure
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans} Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Back     alignment and structure
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus} Back     alignment and structure
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera} Back     alignment and structure
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A* Back     alignment and structure
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana} Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 523
d1pg4a_643 e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en 1e-129
d1v25a_534 e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0 1e-115
d1ry2a_640 e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast 1e-109
d1lcia_541 e.23.1.1 (A:) Luciferase {Firefly (Photinus pyrali 1e-107
d1amua_514 e.23.1.1 (A:) Phenylalanine activating domain of g 1e-101
d1mdba_536 e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B 3e-95
d3cw9a1503 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alc 3e-92
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]
 Score =  389 bits (1000), Expect = e-129
 Identities = 131/523 (25%), Positives = 210/523 (40%), Gaps = 35/523 (6%)

Query: 31  LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYT 90
           ++Y  +H  V R A+ L+  GI  GDVVA+  P   E  +  LA  R  A  + +   ++
Sbjct: 104 ISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFS 163

Query: 91  PDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDT 150
           P+     + DS S+L++T  EG  A ++   K N+  A         E  + L  + SD 
Sbjct: 164 PEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDI 223

Query: 151 NAISKL------------------TNDPSDVALFLHTSGTTSRPKGVPLTQ-NNLAASVS 191
           +                         +  D    L+TSG+T +PKGV  T    L  + +
Sbjct: 224 DWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAT 283

Query: 192 NIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLP--AAGRFSASTFWQDMI 249
             K V+     D       +  V G    L    A GA   +        + +   Q + 
Sbjct: 284 TFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVD 343

Query: 250 KYNATWYTAVPTIHQIVLDRHVAKPEPV-YPKLRFIRSCSASLAPVILSRLEEAFG---A 305
           K+        PT  + ++       E      LR + S    + P       +  G    
Sbjct: 344 KHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKC 403

Query: 306 PVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCI 364
           PV++ +  TE    M + PLP     K GS  RP  G + A++D  G PQEG  +G + I
Sbjct: 404 PVVDTWWQTETGGFMIT-PLPGAIELKAGSATRPFFGVQPALVDNEGHPQEGATEGNLVI 462

Query: 365 RG--PNVTKGYKNNPEANKSAFLF---GWFHTGDIGYFDSDGYLHLVGRIKELINRGGEK 419
               P   +    + E  +  +       + +GD    D DGY  + GR+ +++N  G +
Sbjct: 463 TDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHR 522

Query: 420 ISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPREGSNIDEE---EVLRFCKKN 476
           +   E+++ L++HP IA+A   G+P    G+ I   +    G     E   EV  + +K 
Sbjct: 523 LGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEEPSPELYAEVRNWVRKE 582

Query: 477 VAAFKVPKRVFITNELPKTASGKIQRRIVSEHFLAQVSAAKVP 519
           +     P  +  T+ LPKT SGKI RRI+ +      S     
Sbjct: 583 IGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGDTSNLGDT 625


>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Length = 534 Back     information, alignment and structure
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Length = 541 Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Length = 503 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query523
d1pg4a_643 Acetyl-CoA synthetase {Salmonella enterica [TaxId: 100.0
d1lcia_541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 100.0
d1ry2a_640 Acetyl-CoA synthetase {Baker's yeast (Saccharomyce 100.0
d1v25a_534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 100.0
d1mdba_536 Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtil 100.0
d1amua_514 Phenylalanine activating domain of gramicidin synt 100.0
d3cw9a1503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 100.0
d1lcia_ 541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 87.79
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]
Probab=100.00  E-value=1.9e-78  Score=626.04  Aligned_cols=507  Identities=25%  Similarity=0.377  Sum_probs=420.5

Q ss_pred             CHH-HHHHHHHhhcCCceeEEECC-----cccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHh
Q 009867            5 TLI-GLLNQVIDQFSSKRALSVSG-----KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRA   78 (523)
Q Consensus         5 ti~-~~l~~~a~~~p~~~a~~~~~-----~~~~Ty~el~~~~~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~   78 (523)
                      |+. .+|+++++.+||++|+++.+     .+++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++
T Consensus        72 N~~~n~ldrh~~~~~d~~Ali~~~~~~~~~~~~TY~eL~~~v~~~A~~L~~~Gv~~Gd~V~i~~~n~~e~iv~~lA~~~~  151 (643)
T d1pg4a_          72 NLAANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARI  151 (643)
T ss_dssp             CHHHHHTGGGHHHHTTSEEEEEECSSTTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhCCCCEEEEEEecCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecccchHHHHHHHHHHHh
Confidence            444 36667888899999999642     268999999999999999999999999999999999999999999999999


Q ss_pred             cCEEeeCCCCCCHHHHHHHHhhCCceEEEecccch---------hHHHHHHhhcc---cccceeeeecCCcccccc----
Q 009867           79 RATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGN---------AAAQAAASKLN---ISHATATLLDADSELTLS----  142 (523)
Q Consensus        79 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~----  142 (523)
                      |++++|+++.++.+++.+++++++++++|+++...         ...........   +...+. ...........    
T Consensus       152 Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~-~~~~~~~~~~~~~~~  230 (643)
T d1pg4a_         152 GAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIV-LKRTGSDIDWQEGRD  230 (643)
T ss_dssp             TCEEEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEE-ECSSCCCCCCCBTTE
T ss_pred             CeEEEecCCCCCHHHHHHHHHhcCCCEEEEcchhhhhccccchhhhHHHHHhccccccceEEEE-eccCCcccccccccc
Confidence            99999999999999999999999999999986532         11112111111   111111 11111000000    


Q ss_pred             --ccc-ccccccccccCCCCCCCeEEEEEeeCCCCCCcceeechHHHHHHH-HHHHHHhccCCCceEEEEcChhhHHHHH
Q 009867          143 --LAH-SESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASV-SNIKSVYKLTESDSTVIVLPLFHVHGML  218 (523)
Q Consensus       143 --~~~-~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~g~~  218 (523)
                        ... .............+++++++++|||||||.||+|+++|.+++... ......+++.++|++++.+|++|.+++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~  310 (643)
T d1pg4a_         231 LWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHS  310 (643)
T ss_dssp             EEHHHHHTTSCSCCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHH
T ss_pred             hhhhhhhcccCcccCCCCCCCCCeEEEEeCCCcccCCCEEEEccHHHHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHH
Confidence              000 011112223334567899999999999999999999999976554 4456667899999999999999999988


Q ss_pred             HHHHHhhhcCcEEEeCCCC--CCChhHHHHHHHhcCccEEeechHHHHHHHhcccC-CCCCCCCCcceEEeccCCCCHHH
Q 009867          219 AGLLSSFAAGAAVTLPAAG--RFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVA-KPEPVYPKLRFIRSCSASLAPVI  295 (523)
Q Consensus       219 ~~~~~~l~~g~~~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~-~~~~~~~~l~~i~~~g~~~~~~~  295 (523)
                      ..++++|..|+++++.++.  ..++..+++.++++++|+++++|++++.|++.... ....++++||.+.++|+++++++
T Consensus       311 ~~l~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~dl~sLr~i~~~G~pl~~~~  390 (643)
T d1pg4a_         311 YLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEA  390 (643)
T ss_dssp             HTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEESSCCCHHH
T ss_pred             HHHHHHHHhCCEEEEecCCCCCCCHHHHHHHHHHHCCcEEEehHHHHHHHHhCcchhccccCCCceEEEEEEeCCCCHHH
Confidence            8788999999999986532  34788999999999999999999999999877543 23346889999999999999999


Q ss_pred             HHHHHHHhC---CceeccccccccccccccCCCCCCCCCCCCCcccc-CCcEEEEECCCCCccCCCceeEEEEeC--CCc
Q 009867          296 LSRLEEAFG---APVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRP-VGQEIAILDEIGVPQEGGAKGEVCIRG--PNV  369 (523)
Q Consensus       296 ~~~~~~~~~---~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~i~d~~~~~~~~g~~Gel~v~~--~~~  369 (523)
                      .+++.+.++   +++++.||+||++++++... ........+++|+| +|++++++|++|++++.|+.|||+|+|  |++
T Consensus       391 ~~~~~~~~g~~~~~i~~~yG~TE~g~~~~~~~-~~~~~~~~gs~G~p~~g~~v~ivd~~g~~~~~g~~Gel~v~~~~p~~  469 (643)
T d1pg4a_         391 WEWYWKKIGKEKCPVVDTWWQTETGGFMITPL-PGAIELKAGSATRPFFGVQPALVDNEGHPQEGATEGNLVITDSWPGQ  469 (643)
T ss_dssp             HHHHHHHTTTTCSCEEEEBCCGGGSSCSBCCC-TTTCCBCTTCCBSBCTTCCEEEECTTCCBCCSSEEEEEEECSCCTTC
T ss_pred             HHHHHHHhCCCCceEEEeechhhccceEEecC-CCccCCCCCccccccCCCEEEEECCCCCCCCCCceEEEEEecCCCcc
Confidence            999999984   77999999999997766543 23334567889999 799999999999999999999999999  468


Q ss_pred             ccccCCChhhhhhhc---cCCeeeeCceeeEcCCCcEEEecccccceecCCcccChHHHHHHHhcCCCceeeEEEeecCC
Q 009867          370 TKGYKNNPEANKSAF---LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDD  446 (523)
Q Consensus       370 ~~gy~~~~~~~~~~~---~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~  446 (523)
                      +.||+++++.+...+   .+|||+|||+|++|++|.+++.||+||+||++|++|+|.+||++|.++|+|.+++|++++++
T Consensus       470 ~~~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~ik~~G~ri~p~eIE~~l~~~p~V~eaaVvg~~d~  549 (643)
T d1pg4a_         470 ARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHA  549 (643)
T ss_dssp             CCEETTCHHHHHHHHHSSSTTSEEEEEEEEECTTSCEEEEEESSSEEEETTEEEEHHHHHHHHHHSTTEEEEEEEEEEET
T ss_pred             cccccCChhhchhhhcccCCCeEEcCCEEEECCCceEEEecccccEEEECCEEECHHHHHHHHHhCCCcceEEEEEEECC
Confidence            899999988766654   47899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceeEEEEEeCCCCCCCH---HHHHHHHHhcCcCCCCCcEEEEeCCcCCCCCccccHHHHHHHHHHhh
Q 009867          447 KYGEEINCAIIPREGSNIDE---EEVLRFCKKNVAAFKVPKRVFITNELPKTASGKIQRRIVSEHFLAQV  513 (523)
Q Consensus       447 ~~~~~~~~~v~~~~~~~~~~---~~l~~~~~~~l~~~~~p~~i~~~~~lp~t~~GK~~r~~l~~~~~~~~  513 (523)
                      ..++.++++|++.++...+.   ++|+++++++|++|++|+.|+++++||+|++||++|+.|++++..+.
T Consensus       550 ~~ge~~~a~Vv~~~~~~~~~~~~~~i~~~~~~~L~~~~vP~~i~~v~~lP~T~sGKi~R~~Lr~~~~~~~  619 (643)
T d1pg4a_         550 IKGQAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGDT  619 (643)
T ss_dssp             TTEEEEEEEEEECTTCCCCHHHHHHHHHHHHHHTCGGGCCSEEEECSCCCBCTTSCBCHHHHHHHHHTC-
T ss_pred             CCCeEEEEEEEECCCCCCCHHHHHHHHHHHHhhCCcccCccEEEEECCCCCCCCcCccHHHHHHHhcCCc
Confidence            88899999999998876665   47999999999999999999999999999999999999999987643



>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure