Citrus Sinensis ID: 009877
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 523 | ||||||
| 356507704 | 683 | PREDICTED: DUF246 domain-containing prot | 0.971 | 0.743 | 0.779 | 0.0 | |
| 449447613 | 573 | PREDICTED: DUF246 domain-containing prot | 0.982 | 0.897 | 0.766 | 0.0 | |
| 356515426 | 566 | PREDICTED: DUF246 domain-containing prot | 0.971 | 0.897 | 0.773 | 0.0 | |
| 359493257 | 582 | PREDICTED: DUF246 domain-containing prot | 0.984 | 0.884 | 0.755 | 0.0 | |
| 255585812 | 587 | conserved hypothetical protein [Ricinus | 0.984 | 0.877 | 0.769 | 0.0 | |
| 224146358 | 584 | predicted protein [Populus trichocarpa] | 0.906 | 0.811 | 0.808 | 0.0 | |
| 297846612 | 569 | hypothetical protein ARALYDRAFT_473680 [ | 0.975 | 0.896 | 0.734 | 0.0 | |
| 15293043 | 568 | putative growth regulator protein [Arabi | 0.973 | 0.896 | 0.734 | 0.0 | |
| 18399706 | 568 | O-fucosyltransferase-like protein [Arabi | 0.973 | 0.896 | 0.734 | 0.0 | |
| 357455475 | 577 | DUF246 domain-containing protein [Medica | 0.885 | 0.802 | 0.765 | 0.0 |
| >gi|356507704|ref|XP_003522604.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/517 (77%), Positives = 448/517 (86%), Gaps = 9/517 (1%)
Query: 1 MHGLSRLGSARSTTSSPPSSPRFRHGRNKNIAGSRVGSGGGKQNLVEKLVVVLISAVFKR 60
MHG SRLG A SPPSSPRFRHGR+K+ + N +EKLV +L+SAVF+R
Sbjct: 118 MHGYSRLGGA---ARSPPSSPRFRHGRSKSSSWCSSKE----SNSMEKLVFILMSAVFRR 170
Query: 61 KGVLLVAPLLYISVMLLYMSSFGFDVVDLKS-VVVVRERAPPGSVYRSPQVFQKLWPFMQ 119
+G+LL APLLYIS MLLYM S DVV +K+ VV+V +RAPPGSVYRSPQ+FQ LWPFM+
Sbjct: 171 RGLLLFAPLLYISGMLLYMGSLSIDVVSIKNGVVLVHKRAPPGSVYRSPQLFQNLWPFME 230
Query: 120 AE-AIANNTLMTAWNSKVHQPWKPCADRSNSNAELPKSNGFLIIEANGGLNQQRLSICDA 178
A+ N LM AW K + WKPCA+RS ELPKSNGFLIIEANGGLNQQRLSICDA
Sbjct: 231 ADNGTTLNVLMRAWTKKELREWKPCANRSVPEIELPKSNGFLIIEANGGLNQQRLSICDA 290
Query: 179 VAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPEDILQQFD 238
VAVAGLLNATL+IPIFHLNSVWRDSSNFGDIFDE+FF+ +L + V+VV+ELP+DILQ+FD
Sbjct: 291 VAVAGLLNATLLIPIFHLNSVWRDSSNFGDIFDENFFIQSLGNRVHVVRELPDDILQRFD 350
Query: 239 HNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPSNIQGLRCLANF 298
+NIS+IVNLRVKGWSS HYLQKVLP+L +GAVRIAPFSNRLAQ VPS IQGLRC ANF
Sbjct: 351 NNISNIVNLRVKGWSSSAHYLQKVLPQLLEMGAVRIAPFSNRLAQAVPSKIQGLRCFANF 410
Query: 299 EALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKREM 358
ALRFSEPIR LAE MVDRMVK SS SGGKYVSVHLRFE DMVAFSCCEYDGGEEEK EM
Sbjct: 411 GALRFSEPIRTLAESMVDRMVKYSSHSGGKYVSVHLRFEEDMVAFSCCEYDGGEEEKHEM 470
Query: 359 DIARERSWRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIY 418
DIARERSWRGKFR++ R+I+PGANRVDG+CPLTPLEVGMMLRGMGFDNTTSVYVAAGKIY
Sbjct: 471 DIARERSWRGKFRRKHRIIKPGANRVDGRCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIY 530
Query: 419 KAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNF 478
K +KY+APL+QMFPRL+TK+TLATPEELA F GHS+RLAALDYTVCLHSEVFVTTQGGNF
Sbjct: 531 KEQKYMAPLKQMFPRLQTKNTLATPEELAQFMGHSTRLAALDYTVCLHSEVFVTTQGGNF 590
Query: 479 PHFLMGHRRYLYGGHAKTIKPDKRKLALLFDRPNIRY 515
PHFLMGHRRY+YGGHAKTIKPDKR+LALLFD PNIR+
Sbjct: 591 PHFLMGHRRYMYGGHAKTIKPDKRRLALLFDNPNIRW 627
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449447613|ref|XP_004141562.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] gi|449506825|ref|XP_004162859.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356515426|ref|XP_003526401.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|359493257|ref|XP_002272758.2| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255585812|ref|XP_002533585.1| conserved hypothetical protein [Ricinus communis] gi|223526544|gb|EEF28803.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224146358|ref|XP_002325978.1| predicted protein [Populus trichocarpa] gi|222862853|gb|EEF00360.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|297846612|ref|XP_002891187.1| hypothetical protein ARALYDRAFT_473680 [Arabidopsis lyrata subsp. lyrata] gi|297337029|gb|EFH67446.1| hypothetical protein ARALYDRAFT_473680 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|15293043|gb|AAK93632.1| putative growth regulator protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|18399706|ref|NP_564461.1| O-fucosyltransferase-like protein [Arabidopsis thaliana] gi|23297509|gb|AAN12984.1| putative growth regulator [Arabidopsis thaliana] gi|332193681|gb|AEE31802.1| O-fucosyltransferase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|357455475|ref|XP_003598018.1| DUF246 domain-containing protein [Medicago truncatula] gi|355487066|gb|AES68269.1| DUF246 domain-containing protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 523 | ||||||
| TAIR|locus:2014666 | 568 | AT1G35510 [Arabidopsis thalian | 0.973 | 0.896 | 0.711 | 1.6e-196 | |
| TAIR|locus:2049527 | 567 | AT2G01480 [Arabidopsis thalian | 0.927 | 0.855 | 0.576 | 5.1e-154 | |
| TAIR|locus:2006852 | 562 | AT1G14970 [Arabidopsis thalian | 0.904 | 0.841 | 0.557 | 3.2e-145 | |
| TAIR|locus:504956200 | 589 | AT1G38131 [Arabidopsis thalian | 0.793 | 0.704 | 0.603 | 1.7e-137 | |
| TAIR|locus:1005716710 | 470 | AT1G38065 "AT1G38065" [Arabido | 0.703 | 0.782 | 0.650 | 1.3e-132 | |
| TAIR|locus:2029984 | 611 | AT1G29200 [Arabidopsis thalian | 0.393 | 0.337 | 0.407 | 2e-80 | |
| TAIR|locus:2168297 | 504 | AT5G65470 [Arabidopsis thalian | 0.384 | 0.398 | 0.426 | 4.1e-77 | |
| TAIR|locus:2079281 | 557 | AT3G26370 [Arabidopsis thalian | 0.703 | 0.660 | 0.404 | 5e-76 | |
| TAIR|locus:2121793 | 551 | RHS17 "root hair specific 17" | 0.766 | 0.727 | 0.396 | 1.7e-75 | |
| TAIR|locus:2121909 | 519 | AT4G24530 [Arabidopsis thalian | 0.369 | 0.371 | 0.466 | 6.7e-75 |
| TAIR|locus:2014666 AT1G35510 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1903 (674.9 bits), Expect = 1.6e-196, P = 1.6e-196
Identities = 373/524 (71%), Positives = 427/524 (81%)
Query: 1 MHGLSRLGSARXXXXXXX------XXXRFRHGRNKNIAGSRVGSGGGKQNLVEKLVVVLI 54
MHGLSRLG+ R RH R K++AG G KQ L E+LV +L
Sbjct: 1 MHGLSRLGNGSSNGRINIPSPSPPSSPRIRHTRGKSLAG-----GVYKQGLGERLVFLLF 55
Query: 55 SAVFKRKGVLLVAPLLYISVMLLYMSSFGFDXXXXXXXXXX-RERAPPGSVYRSPQVFQK 113
S VF+RKGVLL+APLLYI+ MLL+M SFGF R PGSVYRSP+VF++
Sbjct: 56 SIVFRRKGVLLLAPLLYIAGMLLFMGSFGFTVLDLGHGVEIVYRRGSPGSVYRSPKVFKR 115
Query: 114 LWPFMQAEA--IANNTLMTAWNSKVHQPWKPCADRSNSNAELPKSNGFLIIEANGGLNQQ 171
LWP M+A+ ++N LM AW +V WKPC +N +A SNG+ IIEANGGLNQQ
Sbjct: 116 LWPVMEADVNGSSHNVLMEAWKPRVKSVWKPCIS-TNVSAAGSNSNGYFIIEANGGLNQQ 174
Query: 172 RLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPE 231
RLSICDAVAVAGLLNATLVIPIFHLNSVWRDSS FGDIFDEDFF++AL NVNVVKELP+
Sbjct: 175 RLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSKFGDIFDEDFFIYALSKNVNVVKELPK 234
Query: 232 DILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPSNIQG 291
D+L+++++NISSIVNLR+K WSSP +YLQKVLP+L LGAVR+APFSNRLA VP++IQG
Sbjct: 235 DVLERYNYNISSIVNLRLKAWSSPAYYLQKVLPQLLRLGAVRVAPFSNRLAHAVPAHIQG 294
Query: 292 LRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGG 351
LRCLANFEALRF+EPIR+LAEKMVDRMV S +SGGKYVSVHLRFE DMVAFSCCEYD G
Sbjct: 295 LRCLANFEALRFAEPIRLLAEKMVDRMVTKSVESGGKYVSVHLRFEMDMVAFSCCEYDFG 354
Query: 352 EEEKREMDIARERSWRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVY 411
+ EK EMD+ARER W+GKFR+RGRVIRPGANR+DGKCPLTPLEVGMMLRGMGF+N+T VY
Sbjct: 355 QAEKLEMDMARERGWKGKFRRRGRVIRPGANRIDGKCPLTPLEVGMMLRGMGFNNSTLVY 414
Query: 412 VAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFV 471
VAAG IYKA+KY+APLRQMFP L+TKDTLATPEELA FKGHSSRLAALDYTVCLHSEVFV
Sbjct: 415 VAAGNIYKADKYMAPLRQMFPLLQTKDTLATPEELAPFKGHSSRLAALDYTVCLHSEVFV 474
Query: 472 TTQGGNFPHFLMGHRRYLYGGHAKTIKPDKRKLALLFDRPNIRY 515
+TQGGNFPHFL+GHRRYLY GHA+TIKPDKRKL L D+P+IR+
Sbjct: 475 STQGGNFPHFLIGHRRYLYKGHAETIKPDKRKLVQLLDKPSIRW 518
|
|
| TAIR|locus:2049527 AT2G01480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2006852 AT1G14970 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:504956200 AT1G38131 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:1005716710 AT1G38065 "AT1G38065" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2029984 AT1G29200 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2168297 AT5G65470 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2079281 AT3G26370 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2121793 RHS17 "root hair specific 17" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2121909 AT4G24530 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00038663001 | SubName- Full=Chromosome chr18 scaffold_96, whole genome shotgun sequence; (572 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 523 | |||
| cd11299 | 290 | cd11299, O-FucT_plant, GDP-fucose protein O-fucosy | 1e-149 | |
| pfam10250 | 315 | pfam10250, O-FucT, GDP-fucose protein O-fucosyltra | 1e-110 | |
| cd11296 | 206 | cd11296, O-FucT_like, GDP-fucose protein O-fucosyl | 1e-12 |
| >gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily | Back alignment and domain information |
|---|
Score = 428 bits (1103), Expect = e-149
Identities = 167/336 (49%), Positives = 211/336 (62%), Gaps = 48/336 (14%)
Query: 159 FLIIEANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHA 218
+L++ ANGGLNQQR ICDAVAVA LLNATLV+P NSVW DSS FGDI+D D F+ +
Sbjct: 1 YLLVSANGGLNQQRSQICDAVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKS 60
Query: 219 LRSNVNVVKELPEDILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFS 278
L+ +V VVK+LPE++ + I RV SSP++YL++VLP L+ G +R+APF
Sbjct: 61 LKDDVRVVKKLPEELASKKPE----ITVKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPFD 116
Query: 279 NRLA-QGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFE 337
+RLA +P IQ LRC NF ALRF I L +K+VDR+ + GG ++++HLRFE
Sbjct: 117 SRLANDLLPPEIQRLRCRVNFHALRFVPEIEELGDKLVDRLREA----GGPFLALHLRFE 172
Query: 338 TDMVAFSCCEYDGGEEEKREMDIARERSWRGKFRKRGRVIRPGANRVDGKCPLTPLEVGM 397
DM+AFS C GKCPLTP EVG+
Sbjct: 173 KDMLAFSGC---------------------------------------GKCPLTPEEVGL 193
Query: 398 MLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLA 457
+LR +GF +T +Y+AAG+IY E+ + PLR +FP L TK+TLAT EELA F GHSSRLA
Sbjct: 194 LLRALGFPRSTRIYLAAGEIYGGERRLDPLRSIFPNLYTKETLATAEELAPFSGHSSRLA 253
Query: 458 ALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGH 493
ALDY VCL S+VFV T GGNF + GHRRYL
Sbjct: 254 ALDYIVCLESDVFVPTYGGNFAKAVAGHRRYLGHRK 289
|
Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290 |
| >gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 523 | |||
| PF10250 | 351 | O-FucT: GDP-fucose protein O-fucosyltransferase; I | 100.0 | |
| KOG3849 | 386 | consensus GDP-fucose protein O-fucosyltransferase | 97.54 | |
| PF05830 | 321 | NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 | 95.06 |
| >PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-56 Score=451.31 Aligned_cols=306 Identities=37% Similarity=0.635 Sum_probs=208.1
Q ss_pred ecCchhHHHHHHHHHHHHHHHhcCeEeccccccCccccCCCC-----CCCCCChHHHHHHhcccchhcccCchHHHhhhc
Q 009877 164 ANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSN-----FGDIFDEDFFMHALRSNVNVVKELPEDILQQFD 238 (523)
Q Consensus 164 ~nGGLNQqR~~IcdaVavAriLNATLVlP~l~~~s~W~D~S~-----F~dIFD~dhFI~sL~~dVrIVk~LP~~~~~~~~ 238 (523)
|.||+||||.++++||++|++||+|||||.+.....|+|.++ |+++||+++|++.++++|.+.+.+|..+.....
T Consensus 6 ~~GGfnNQr~~~~~a~~~A~~LnRTLVLPp~~~~~~~~~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~~~~~~~~~ 85 (351)
T PF10250_consen 6 CMGGFNNQRMGFENAVVFAKALNRTLVLPPFIKHYHWKDQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFLPKHWDEVFR 85 (351)
T ss_dssp -SSSHHHHHHHHHHHHHHHHHHT-EEE--EEEEESSSS----EEEEEHHHHB-HHHHTTTS--EE-HHHHHHHHS-GGG-
T ss_pred CCCCHHHHHHHHHHHHHHHHHhCCEEEcCCccccccccccccccccChhhhccHHHHHHHhhCceehheeccchhccccc
Confidence 899999999999999999999999999999999999999988 999999999999999999999999876544221
Q ss_pred ccc-------------------------cceeeccccc-CCChhhHHhhhhhhhhhc------ceEEEcCCccccccC-C
Q 009877 239 HNI-------------------------SSIVNLRVKG-WSSPTHYLQKVLPKLQHL------GAVRIAPFSNRLAQG-V 285 (523)
Q Consensus 239 ~~~-------------------------~~~~~~~~~~-~s~~~yY~~~vlP~l~k~------~Vi~l~~f~~rLa~~-l 285 (523)
... .......... |+.+.+|.++++|.+.++ +++.|.++...+..+ .
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 165 (351)
T PF10250_consen 86 LQYCWSPWESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDNYL 165 (351)
T ss_dssp EEEESS-B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--GG
T ss_pred hhhcccccccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccchhccc
Confidence 100 0112222333 788999999999999887 999999999999876 7
Q ss_pred CCccccccceecccccccchhHHHHHHHHHHHHhhcccCCCCceEEEeecccchhhhhccccCCCChhHHHHHHHHHHhh
Q 009877 286 PSNIQGLRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKREMDIARERS 365 (523)
Q Consensus 286 P~diQrLRCrvnf~ALrF~~~I~~lg~~lV~Rmr~~s~~~~g~yiAlHLRfE~DMlAfsgC~~~~~~~E~~eL~~~R~~~ 365 (523)
+.++|+ +|+|+++|+++|++++++|+. .+++|||+|||+|+|| +++|.+++ ++..|..+|..
T Consensus 166 ~~~~~r--------~l~~~~~i~~~a~~~i~~~~~----~~~~yiavHlR~~~D~--~~~C~~~~---~~~~~~~~~~~- 227 (351)
T PF10250_consen 166 DRDLQR--------YLRFSPEIRELADKFIKRLLA----GGGPYIAVHLRRGKDW--FSACEFKG---ERHLLASPRCW- 227 (351)
T ss_dssp GGGGGG--------G--B-HHHHHHHHHHHHHH--------SSEEEEEE--SHHH--HHHHCT-T-------TTTHHHH-
T ss_pred CccceE--------EEecCHHHHHHHHHHHHHhhc----ccCceEEEeecccCch--HhhcccCC---chHHHHHhHhh-
Confidence 788887 999999999999999999993 4689999999999999 88999955 66777777754
Q ss_pred hccccccCCcccCCcccccCCCCCCCHHHHHHHHhhcCCCCCcEEEEeeccccCccccchhHHhhCCCccccccCCCHHH
Q 009877 366 WRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEE 445 (523)
Q Consensus 366 wk~k~~~~~~~i~~~~~R~~G~CPLTPeEvgl~LralGf~~~T~IYlAsGeiyGg~~~m~pL~~~FPnl~tKe~L~s~eE 445 (523)
..+ .+++.+.+..+.||++|++++.+++++|+.+.|.||||++++|||++.|.+|+++||++++|+++.+.+|
T Consensus 228 -~~~------~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 300 (351)
T PF10250_consen 228 -GKK------SINPEKKRRNGCCPSTPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLKNMFPNVVTKDDLLSHEE 300 (351)
T ss_dssp --GG------GTT-----HHHHS--HHHHHHHHHHHHHHHT-SEEEEEESS-----------HHHHHHHHGGGT--EE--
T ss_pred -ccc------cccchhhhhcCCCCChHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHHHHhhhhEeccccCCHHH
Confidence 222 5678889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhccccchhhhheeeeeccceeeecCCCChhhhhhhhhhcccCCcccc
Q 009877 446 LAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKT 496 (523)
Q Consensus 446 L~pf~~~ss~lAALDYiVcl~SDVFv~t~~GNfa~~V~GhR~y~~~G~~kT 496 (523)
+++|.+ +++|+||++||++||+||+|..++|+.+|+++|+|.+..++||
T Consensus 301 ~~~~~~--~~~a~vD~~i~~~s~~Figt~~Stfs~~i~~~R~~~g~~~~~~ 349 (351)
T PF10250_consen 301 LEPLND--DQLAMVDQEICSRSDVFIGTCGSTFSSNIARERHYRGKPKRKS 349 (351)
T ss_dssp S-------S--HHHHHHHHHHSSEEEE-TT-HHHHHHHHHHHHSSSS---E
T ss_pred hhhccc--cchhHHHHHHHhcCCEEEecCcchhHHHhhcccCcCCCCCCCC
Confidence 999986 8999999999999999999998899999999999984444344
|
Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A. |
| >KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 523 | |||
| 3zy2_A | 362 | Putative GDP-fucose protein O-fucosyltransferase; | 3e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-04 |
| >3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Length = 362 | Back alignment and structure |
|---|
Score = 45.1 bits (106), Expect = 3e-05
Identities = 26/172 (15%), Positives = 54/172 (31%), Gaps = 34/172 (19%)
Query: 301 LRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKREMDI 360
LR+S I A+K + + +V+VHLR + D V CE+ +
Sbjct: 191 LRWSSRITEQAKKFISANL------AKPFVAVHLRNDADWVRV--CEHIDTTTNRPLFAS 242
Query: 361 ARERSWRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLR-GMGFDNTTSVYVAAGKIYK 419
+ + I C + ++ + +G SV+VA+
Sbjct: 243 EQCLGEGHHLGTLTKEI----------CSPSKQQILEQIVEKVGSIGAKSVFVAS----D 288
Query: 420 AEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFV 471
+ + + + E + P+ + +++FV
Sbjct: 289 KDHMIDEINEALKPYEIEAHRQEPD-----------DMYTSLAIMGRADLFV 329
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 523 | |||
| 4ap5_A | 408 | GDP-fucose protein O-fucosyltransferase 2; GT-B, G | 99.58 | |
| 3zy2_A | 362 | Putative GDP-fucose protein O-fucosyltransferase; | 99.12 | |
| 2hhc_A | 330 | NODZ, nodulation fucosyltransferase NODZ; glycosyl | 97.45 | |
| 2de0_X | 526 | Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran | 97.36 |
| >4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=9.4e-15 Score=151.25 Aligned_cols=304 Identities=17% Similarity=0.269 Sum_probs=167.0
Q ss_pred CCCCcEEEEEec-C-chhHHHHHHHHHHHHHHHhcCe----EeccccccCccccCCC------CCCCCCChHHHHHHhcc
Q 009877 154 PKSNGFLIIEAN-G-GLNQQRLSICDAVAVAGLLNAT----LVIPIFHLNSVWRDSS------NFGDIFDEDFFMHALRS 221 (523)
Q Consensus 154 ~~snGYL~V~~n-G-GLNQqR~~IcdaVavAriLNAT----LVlP~l~~~s~W~D~S------~F~dIFD~dhFI~sL~~ 221 (523)
...++||+-..| | |.|.||...-.|.+.|+.||.| ||||-...---|+-.+ .|++.||++++ +.
T Consensus 19 ~~~~rYl~y~~~~g~Gfn~qrd~f~~~a~~a~~Lnrt~~~~LVLPPw~~~~h~~~~~~~~~~ipf~~fFDv~~L----~~ 94 (408)
T 4ap5_A 19 ASRRRYLLYDVNPPEGFNLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSL----NK 94 (408)
T ss_dssp -CCCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTTSCEEEEECCBCCSCGGGSTTSCCCSBCGGGTBCHHHH----HT
T ss_pred ccccceEEecCCCCCcccHHHHHHHHHHHHHHHHhCcCCcEEEeCCCcccccccCCcccceeccHHHhcCHHHH----Hh
Confidence 467899998864 5 8999999999999999999999 9999664333355432 59999999864 55
Q ss_pred cchhcccCchHHHhhhcccc-cceeecc--ccc-----C-----------------------CChhhHHhhhhhhhhhcc
Q 009877 222 NVNVVKELPEDILQQFDHNI-SSIVNLR--VKG-----W-----------------------SSPTHYLQKVLPKLQHLG 270 (523)
Q Consensus 222 dVrIVk~LP~~~~~~~~~~~-~~~~~~~--~~~-----~-----------------------s~~~yY~~~vlP~l~k~~ 270 (523)
.|+|+.. +++++..+... ..+.... ... | .++.|=...+ ......
T Consensus 95 ~vpVI~m--eeFl~~~~~~~~~~v~~l~~~~~~~~~~~~~~k~~~~~c~~~~~~~~~~~~~~~gpfw~~~~v--~~~~~~ 170 (408)
T 4ap5_A 95 NIPVIEY--EQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFWGYEET--RGLNVS 170 (408)
T ss_dssp TSCEEEH--HHHHHHSSSSEEEEEEEEECCTTCCCTTCCCCCEEEECCSSCCSCEECTTSCEECCGGGCTTC--EEEEEE
T ss_pred hCCeeEH--HHHHHHhCCCCCcceeeccccHhhcccccccchhhhhhhhhccccccccccCccCCccccccc--ccCCce
Confidence 6677643 44443221110 0000000 000 0 0111100000 001111
Q ss_pred eEEEcCCcccccc----CCCCc---cccc-cceec----------ccccccchhHHHHHHHHHHHHhhcccCCCCceEEE
Q 009877 271 AVRIAPFSNRLAQ----GVPSN---IQGL-RCLAN----------FEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSV 332 (523)
Q Consensus 271 Vi~l~~f~~rLa~----~lP~d---iQrL-RCrvn----------f~ALrF~~~I~~lg~~lV~Rmr~~s~~~~g~yiAl 332 (523)
-+.+.+..+.+.. ..|.. +.+. .+.+. -..|+|.+.|.+.|++.++..-. ++|+++
T Consensus 171 c~~~~~~~~~~~~~~~~~~~~~s~~v~~~e~~l~~~~~~~~~~~~~r~l~~s~~l~~~a~~fi~~~L~------~~~~~~ 244 (408)
T 4ap5_A 171 CLSVQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTRRSMVFARHLREVGDEFRSRHLN------STDDAD 244 (408)
T ss_dssp EEEECSBGGGGHHHHHHCTTCSEEEEESGGGSBCSSTTSHHHHHHHHTCCBCHHHHHHHHHHHHHHHC------CCTTTT
T ss_pred eEEEeecchhhhhhhhhcCChhhhhhhhcccCCccccchHhhhhHHHHhhhhHHHHHHHHHHHHHHhC------ccccee
Confidence 1222222222110 00100 0000 01111 13689999999999998887652 366677
Q ss_pred eecccchhhhhccccCCCChhHHHHHHHHHHhhhccccccCCcccCCcccccCC-CCCCCHHHHHHHHhhcCCCCCcEEE
Q 009877 333 HLRFETDMVAFSCCEYDGGEEEKREMDIARERSWRGKFRKRGRVIRPGANRVDG-KCPLTPLEVGMMLRGMGFDNTTSVY 411 (523)
Q Consensus 333 HLRfE~DMlAfsgC~~~~~~~E~~eL~~~R~~~wk~k~~~~~~~i~~~~~R~~G-~CPLTPeEvgl~LralGf~~~T~IY 411 (523)
|+|.+.|+... |....... ...+..-+.|++ +-..... .||-.++-+..+.+.|-=.+-+.||
T Consensus 245 h~r~~~dw~~~--~~~~~~~~---------~~~y~~~H~Rr~-----d~~~~~~~~~ps~~~~~~~i~~~~~~~~~~~Vy 308 (408)
T 4ap5_A 245 RIPFQEDWMKM--KVKLGSAL---------GGPYLGVHLRRK-----DFIWGHRQDVPSLEGAVRKIRSLMKTHRLDKVF 308 (408)
T ss_dssp TCCCCSSGGGC--CCCTTCBC---------CEEEEEEEECCT-----TTTTTTCSSSCCHHHHHHHHHHHHHHHTCSCEE
T ss_pred ecccchhHhhh--hccccccc---------CCCccccccccc-----cchhhhhccCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 77776666553 32211100 000111111111 0001111 2333222223333323222445899
Q ss_pred EeeccccCccccchhHHhhCCCccccccCCCHHHHhhhhccccchhhhheeeeeccceeeecCCCChhhhhhhhhhcccC
Q 009877 412 VAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYG 491 (523)
Q Consensus 412 lAsGeiyGg~~~m~pL~~~FPnl~tKe~L~s~eEL~pf~~~ss~lAALDYiVcl~SDVFv~t~~GNfa~~V~GhR~y~~~ 491 (523)
||+-+ .+..+..|++.+|.++.-.. ..+++..+. ...+|.||-+||.+||+||+|..++|+..|.=.|-++
T Consensus 309 iATD~---~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~--d~~~a~idq~Ic~~a~~FiGt~~StfS~~I~~eR~~~-- 379 (408)
T 4ap5_A 309 VATDA---VRKEYEELKKLLPEMVRFEP--TWEELELYK--DGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREIL-- 379 (408)
T ss_dssp EEECC---CHHHHHHHHHHCTTEECCCC--CHHHHHHHH--HHHHHHHHHHHHHTEEEEEBCTTCHHHHHHHHHHHHH--
T ss_pred EeCCC---chhHHHHHHHhCCCcEEecC--cchhhhccC--cchhhHHHHHHHHhCCeeEeCCcCchhHHHHHHHHhc--
Confidence 99875 24457889999998764332 345666664 4567999999999999999999999999999999987
Q ss_pred Ccccc
Q 009877 492 GHAKT 496 (523)
Q Consensus 492 G~~kT 496 (523)
|+.+.
T Consensus 380 G~~~~ 384 (408)
T 4ap5_A 380 GLDPK 384 (408)
T ss_dssp TBCGG
T ss_pred CCCCC
Confidence 87643
|
| >3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* | Back alignment and structure |
|---|
| >2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* | Back alignment and structure |
|---|
| >2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00