Citrus Sinensis ID: 009877


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520---
MHGLSRLGSARSTTSSPPSSPRFRHGRNKNIAGSRVGSGGGKQNLVEKLVVVLISAVFKRKGVLLVAPLLYISVMLLYMSSFGFDVVDLKSVVVVRERAPPGSVYRSPQVFQKLWPFMQAEAIANNTLMTAWNSKVHQPWKPCADRSNSNAELPKSNGFLIIEANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPEDILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKREMDIARERSWRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKTIKPDKRKLALLFDRPNIRYIAIQLLQF
cccccccccccccccccccccccccccccccccccccccccccccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHcccccEEEccccHHHHHHcccccccEEEEcccccccHHHHHHHHHHHHHHcccEEEccccccccccccccccccHHHHccccccccHHHHHHHHHHHHHHHHccccccccEEEEEccccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHcccccccEEEEEccEEcccccccHHHHHHccccccccccccHHHHHHHcccccccccccEEEEEcccEEEEcccccHHHHHcccHHccccccccEEcccHHHHHHHHcccccccccccEEcc
ccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEccccccccccccHHHHHHHcHHHcccccccccHHHHcccccccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHEEcccccccccccccccHHHHccHHHHHHHHHHHcEHHHcccHHHHHHccccccccccccccccccHHHHHHHHHHHHHHccEEEEcccHHHHHccccHHHHHHEEHHHHHHHHccHHHHHHHHHHHHHHHHccccccccEEEEEEEEcccEEEEEcccccccHHHHHHHHHHHHHcccccEcccccEEcHHHHHHcccccccHHHHHHHHHHcccccccEEEEEEcccccccHHHHHHHHHccccccccccccHHHHHHccccHHHHHHHHHEEEccccEEEEcccccHHHHHHHHHHHHcccccccccccHHHHHHHHccccccHHHEEEccc
mhglsrlgsarsttssppssprfrhgrnkniagsrvgsgggkqNLVEKLVVVLISAVFKRKGVLLVAPLLYISVMLLYMSsfgfdvvdlKSVVVVrerappgsvyrspqvfQKLWPFMQAEAIANNTLMTawnskvhqpwkpcadrsnsnaelpksngFLIIEangglnqqrLSICDAVAVAGLLNATLVIPIFHlnsvwrdssnfgdifdedFFMHALRSNVNVVKELPEDILQQFDHNISSIVNLrvkgwsspthyLQKVLPKLqhlgavriapfsnrlaqgvpsniqgLRCLANFEALRFSEPIRMLAEKMVDRMVknssqsggkyVSVHLRFETDMVAfscceydggeeeKREMDIARERSWRgkfrkrgrvirpganrvdgkcpltpleVGMMlrgmgfdntTSVYVAAGKIykaekyvaplrqmfprletkdtlatpeELAAFKGHSSRLAALDYTVCLHSEVFVttqggnfphflmghrrylygghaktikpdkrklallfdrpNIRYIAIQLLQF
mhglsrlgsarsttssppssprfrhgrnkniagsrvgsgggkqnLVEKLVVVLISAVFKRKGVLLVAPLLYISVMLLYMSSFGFDVVDLKSVVVVRErappgsvyrspqvFQKLWPFMQAEAIANNTLMTAWNSKVHQPWKPCADRSNSNAELPKSNGFLIIEANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPEDILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEydggeeekremdiarerswrgkfrkrgrvirpganrvdgkcplTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKTIKPDKRKLALLFDRPNIRYIAIQLLQF
MHGLSRLGSARsttssppsspRFRHGRNKNIAGSRVGSGGGKQNLVEKLVVVLISAVFKRKGVLLVAPLLYISVMLLYMSSFGFDvvdlksvvvvRERAPPGSVYRSPQVFQKLWPFMQAEAIANNTLMTAWNSKVHQPWKPCADRSNSNAELPKSNGFLIIEANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPEDILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKREMDIARERSWRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKTIKPDKRKLALLFDRPNIRYIAIQLLQF
*******************************************NLVEKLVVVLISAVFKRKGVLLVAPLLYISVMLLYMSSFGFDVVDLKSVVVVRERAPPGSVYRSPQVFQKLWPFMQAEAIANNTLMTAWNSKVHQPWKPC*************NGFLIIEANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPEDILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVDR*********GKYVSVHLRFETDMVAFSCCEYDG***************WRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKTIKPDKRKLALLFDRPNIRYIAIQLL**
*************************************************VVVLISAVFKRKGVLLVAPLLYISVMLLYMSSFGFDV***************************************************QPW****************NGFLIIEANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPEDILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVDRMV*******GKYVSVHLRFETDMVAFSCCEYDGGEEEKREMDIARERSWRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKTIKPDKRKLALLFDRPNIRYIAIQLLQF
************************HGRNKNIAGSRVGSGGGKQNLVEKLVVVLISAVFKRKGVLLVAPLLYISVMLLYMSSFGFDVVDLKSVVVVRERAPPGSVYRSPQVFQKLWPFMQAEAIANNTLMTAWNSKVHQPWKPCADRSNSNAELPKSNGFLIIEANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPEDILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKREMDIARERSWRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKTIKPDKRKLALLFDRPNIRYIAIQLLQF
*******************************************NLVEKLVVVLISAVFKRKGVLLVAPLLYISVMLLYMSSFGFDVVDLKSVVVVRERAPPGSVYRSPQVFQKLWPFMQAEAIANNTLMTAWNSKVHQPWKPCADRSNSNAELPKSNGFLIIEANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPEDILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKREMDIARERSWRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKTIKPDKRKLALLFDRPNIRYIAIQLLQF
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MHGLSRLGSARSTTSSPPSSPRFRHGRNKNIAGSRVGSGGGKQNLVEKLVVVLISAVFKRKGVLLVAPLLYISVMLLYMSSFGFDVVDLKSVVVVRERAPPGSVYRSPQVFQKLWPFMQAEAIANNTLMTAWNSKVHQPWKPCADRSNSNAELPKSNGFLIIEANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPEDILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKREMDIARERSWRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKTIKPDKRKLALLFDRPNIRYIAIQLLQF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query523 2.2.26 [Sep-21-2011]
Q8W486519 Uncharacterized protein A no no 0.692 0.697 0.383 2e-65
>sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1 Back     alignment and function desciption
 Score =  250 bits (638), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 146/381 (38%), Positives = 222/381 (58%), Gaps = 19/381 (4%)

Query: 132 WNSKVHQPWKPC-ADRSNSNAELPKSNGFLIIEANGGLNQQRLSICDAVAVAGLLNATLV 190
           W S     W+P  A RS+      ++NG+L +  NGGLNQQR +IC+AV  A ++NATLV
Sbjct: 63  WESAKSGGWRPSSAPRSDWPPPTKETNGYLRVRCNGGLNQQRSAICNAVLAARIMNATLV 122

Query: 191 IPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPEDILQQFDHNISSIVNLRVK 250
           +P    NS W D S F  I+D + F+  L+ +V +V ++P D+ +           +R  
Sbjct: 123 LPELDANSFWHDDSGFQGIYDVEHFIETLKYDVKIVGKIP-DVHKNGKTKKIKAFQIRPP 181

Query: 251 GWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPS-NIQGLRCLANFEALRFSEPIRM 309
             +    YL   L  ++   A+ + PFS+RLA+ + +   Q LRC  N+ ALRF   I  
Sbjct: 182 RDAPIEWYLTTALKAMREHSAIYLTPFSHRLAEEIDNPEYQRLRCRVNYHALRFKPHIMK 241

Query: 310 LAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKREMDIARERSWRGK 369
           L+E +VD++     +S G ++S+HLRFE DM+AF+ C      EE++ +   R+ ++  K
Sbjct: 242 LSESIVDKL-----RSQGHFMSIHLRFEMDMLAFAGCFDIFNPEEQKILRKYRKENFADK 296

Query: 370 FRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQ 429
                R+I     R  GKCPLTP EVG++LR M FDN+T +Y+AAG+++  E+++ P R 
Sbjct: 297 -----RLIY-NERRAIGKCPLTPEEVGLILRAMRFDNSTRIYLAAGELFGGEQFMKPFRT 350

Query: 430 MFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGG--NFPHFLMGHRR 487
           +FPRL+   ++   EEL+A        +A+DY VCL S++F+ T  G  NF + L+GHR 
Sbjct: 351 LFPRLDNHSSVDPSEELSA-TSQGLIGSAVDYMVCLLSDIFMPTYDGPSNFANNLLGHR- 408

Query: 488 YLYGGHAKTIKPDKRKLALLF 508
            LY G   TI+PD++ LA +F
Sbjct: 409 -LYYGFRTTIRPDRKALAPIF 428





Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query523
356507704 683 PREDICTED: DUF246 domain-containing prot 0.971 0.743 0.779 0.0
449447613573 PREDICTED: DUF246 domain-containing prot 0.982 0.897 0.766 0.0
356515426566 PREDICTED: DUF246 domain-containing prot 0.971 0.897 0.773 0.0
359493257582 PREDICTED: DUF246 domain-containing prot 0.984 0.884 0.755 0.0
255585812587 conserved hypothetical protein [Ricinus 0.984 0.877 0.769 0.0
224146358584 predicted protein [Populus trichocarpa] 0.906 0.811 0.808 0.0
297846612569 hypothetical protein ARALYDRAFT_473680 [ 0.975 0.896 0.734 0.0
15293043568 putative growth regulator protein [Arabi 0.973 0.896 0.734 0.0
18399706568 O-fucosyltransferase-like protein [Arabi 0.973 0.896 0.734 0.0
357455475577 DUF246 domain-containing protein [Medica 0.885 0.802 0.765 0.0
>gi|356507704|ref|XP_003522604.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] Back     alignment and taxonomy information
 Score =  832 bits (2148), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/517 (77%), Positives = 448/517 (86%), Gaps = 9/517 (1%)

Query: 1   MHGLSRLGSARSTTSSPPSSPRFRHGRNKNIAGSRVGSGGGKQNLVEKLVVVLISAVFKR 60
           MHG SRLG A     SPPSSPRFRHGR+K+ +           N +EKLV +L+SAVF+R
Sbjct: 118 MHGYSRLGGA---ARSPPSSPRFRHGRSKSSSWCSSKE----SNSMEKLVFILMSAVFRR 170

Query: 61  KGVLLVAPLLYISVMLLYMSSFGFDVVDLKS-VVVVRERAPPGSVYRSPQVFQKLWPFMQ 119
           +G+LL APLLYIS MLLYM S   DVV +K+ VV+V +RAPPGSVYRSPQ+FQ LWPFM+
Sbjct: 171 RGLLLFAPLLYISGMLLYMGSLSIDVVSIKNGVVLVHKRAPPGSVYRSPQLFQNLWPFME 230

Query: 120 AE-AIANNTLMTAWNSKVHQPWKPCADRSNSNAELPKSNGFLIIEANGGLNQQRLSICDA 178
           A+     N LM AW  K  + WKPCA+RS    ELPKSNGFLIIEANGGLNQQRLSICDA
Sbjct: 231 ADNGTTLNVLMRAWTKKELREWKPCANRSVPEIELPKSNGFLIIEANGGLNQQRLSICDA 290

Query: 179 VAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPEDILQQFD 238
           VAVAGLLNATL+IPIFHLNSVWRDSSNFGDIFDE+FF+ +L + V+VV+ELP+DILQ+FD
Sbjct: 291 VAVAGLLNATLLIPIFHLNSVWRDSSNFGDIFDENFFIQSLGNRVHVVRELPDDILQRFD 350

Query: 239 HNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPSNIQGLRCLANF 298
           +NIS+IVNLRVKGWSS  HYLQKVLP+L  +GAVRIAPFSNRLAQ VPS IQGLRC ANF
Sbjct: 351 NNISNIVNLRVKGWSSSAHYLQKVLPQLLEMGAVRIAPFSNRLAQAVPSKIQGLRCFANF 410

Query: 299 EALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKREM 358
            ALRFSEPIR LAE MVDRMVK SS SGGKYVSVHLRFE DMVAFSCCEYDGGEEEK EM
Sbjct: 411 GALRFSEPIRTLAESMVDRMVKYSSHSGGKYVSVHLRFEEDMVAFSCCEYDGGEEEKHEM 470

Query: 359 DIARERSWRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIY 418
           DIARERSWRGKFR++ R+I+PGANRVDG+CPLTPLEVGMMLRGMGFDNTTSVYVAAGKIY
Sbjct: 471 DIARERSWRGKFRRKHRIIKPGANRVDGRCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIY 530

Query: 419 KAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNF 478
           K +KY+APL+QMFPRL+TK+TLATPEELA F GHS+RLAALDYTVCLHSEVFVTTQGGNF
Sbjct: 531 KEQKYMAPLKQMFPRLQTKNTLATPEELAQFMGHSTRLAALDYTVCLHSEVFVTTQGGNF 590

Query: 479 PHFLMGHRRYLYGGHAKTIKPDKRKLALLFDRPNIRY 515
           PHFLMGHRRY+YGGHAKTIKPDKR+LALLFD PNIR+
Sbjct: 591 PHFLMGHRRYMYGGHAKTIKPDKRRLALLFDNPNIRW 627




Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449447613|ref|XP_004141562.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] gi|449506825|ref|XP_004162859.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356515426|ref|XP_003526401.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] Back     alignment and taxonomy information
>gi|359493257|ref|XP_002272758.2| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255585812|ref|XP_002533585.1| conserved hypothetical protein [Ricinus communis] gi|223526544|gb|EEF28803.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|224146358|ref|XP_002325978.1| predicted protein [Populus trichocarpa] gi|222862853|gb|EEF00360.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297846612|ref|XP_002891187.1| hypothetical protein ARALYDRAFT_473680 [Arabidopsis lyrata subsp. lyrata] gi|297337029|gb|EFH67446.1| hypothetical protein ARALYDRAFT_473680 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15293043|gb|AAK93632.1| putative growth regulator protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|18399706|ref|NP_564461.1| O-fucosyltransferase-like protein [Arabidopsis thaliana] gi|23297509|gb|AAN12984.1| putative growth regulator [Arabidopsis thaliana] gi|332193681|gb|AEE31802.1| O-fucosyltransferase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357455475|ref|XP_003598018.1| DUF246 domain-containing protein [Medicago truncatula] gi|355487066|gb|AES68269.1| DUF246 domain-containing protein [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query523
TAIR|locus:2014666568 AT1G35510 [Arabidopsis thalian 0.973 0.896 0.711 1.6e-196
TAIR|locus:2049527567 AT2G01480 [Arabidopsis thalian 0.927 0.855 0.576 5.1e-154
TAIR|locus:2006852562 AT1G14970 [Arabidopsis thalian 0.904 0.841 0.557 3.2e-145
TAIR|locus:504956200589 AT1G38131 [Arabidopsis thalian 0.793 0.704 0.603 1.7e-137
TAIR|locus:1005716710470 AT1G38065 "AT1G38065" [Arabido 0.703 0.782 0.650 1.3e-132
TAIR|locus:2029984611 AT1G29200 [Arabidopsis thalian 0.393 0.337 0.407 2e-80
TAIR|locus:2168297504 AT5G65470 [Arabidopsis thalian 0.384 0.398 0.426 4.1e-77
TAIR|locus:2079281557 AT3G26370 [Arabidopsis thalian 0.703 0.660 0.404 5e-76
TAIR|locus:2121793551 RHS17 "root hair specific 17" 0.766 0.727 0.396 1.7e-75
TAIR|locus:2121909519 AT4G24530 [Arabidopsis thalian 0.369 0.371 0.466 6.7e-75
TAIR|locus:2014666 AT1G35510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1903 (674.9 bits), Expect = 1.6e-196, P = 1.6e-196
 Identities = 373/524 (71%), Positives = 427/524 (81%)

Query:     1 MHGLSRLGSARXXXXXXX------XXXRFRHGRNKNIAGSRVGSGGGKQNLVEKLVVVLI 54
             MHGLSRLG+                  R RH R K++AG     G  KQ L E+LV +L 
Sbjct:     1 MHGLSRLGNGSSNGRINIPSPSPPSSPRIRHTRGKSLAG-----GVYKQGLGERLVFLLF 55

Query:    55 SAVFKRKGVLLVAPLLYISVMLLYMSSFGFDXXXXXXXXXX-RERAPPGSVYRSPQVFQK 113
             S VF+RKGVLL+APLLYI+ MLL+M SFGF              R  PGSVYRSP+VF++
Sbjct:    56 SIVFRRKGVLLLAPLLYIAGMLLFMGSFGFTVLDLGHGVEIVYRRGSPGSVYRSPKVFKR 115

Query:   114 LWPFMQAEA--IANNTLMTAWNSKVHQPWKPCADRSNSNAELPKSNGFLIIEANGGLNQQ 171
             LWP M+A+    ++N LM AW  +V   WKPC   +N +A    SNG+ IIEANGGLNQQ
Sbjct:   116 LWPVMEADVNGSSHNVLMEAWKPRVKSVWKPCIS-TNVSAAGSNSNGYFIIEANGGLNQQ 174

Query:   172 RLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPE 231
             RLSICDAVAVAGLLNATLVIPIFHLNSVWRDSS FGDIFDEDFF++AL  NVNVVKELP+
Sbjct:   175 RLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSKFGDIFDEDFFIYALSKNVNVVKELPK 234

Query:   232 DILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPSNIQG 291
             D+L+++++NISSIVNLR+K WSSP +YLQKVLP+L  LGAVR+APFSNRLA  VP++IQG
Sbjct:   235 DVLERYNYNISSIVNLRLKAWSSPAYYLQKVLPQLLRLGAVRVAPFSNRLAHAVPAHIQG 294

Query:   292 LRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGG 351
             LRCLANFEALRF+EPIR+LAEKMVDRMV  S +SGGKYVSVHLRFE DMVAFSCCEYD G
Sbjct:   295 LRCLANFEALRFAEPIRLLAEKMVDRMVTKSVESGGKYVSVHLRFEMDMVAFSCCEYDFG 354

Query:   352 EEEKREMDIARERSWRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVY 411
             + EK EMD+ARER W+GKFR+RGRVIRPGANR+DGKCPLTPLEVGMMLRGMGF+N+T VY
Sbjct:   355 QAEKLEMDMARERGWKGKFRRRGRVIRPGANRIDGKCPLTPLEVGMMLRGMGFNNSTLVY 414

Query:   412 VAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFV 471
             VAAG IYKA+KY+APLRQMFP L+TKDTLATPEELA FKGHSSRLAALDYTVCLHSEVFV
Sbjct:   415 VAAGNIYKADKYMAPLRQMFPLLQTKDTLATPEELAPFKGHSSRLAALDYTVCLHSEVFV 474

Query:   472 TTQGGNFPHFLMGHRRYLYGGHAKTIKPDKRKLALLFDRPNIRY 515
             +TQGGNFPHFL+GHRRYLY GHA+TIKPDKRKL  L D+P+IR+
Sbjct:   475 STQGGNFPHFLIGHRRYLYKGHAETIKPDKRKLVQLLDKPSIRW 518




GO:0005794 "Golgi apparatus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM
TAIR|locus:2049527 AT2G01480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2006852 AT1G14970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504956200 AT1G38131 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:1005716710 AT1G38065 "AT1G38065" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029984 AT1G29200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168297 AT5G65470 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079281 AT3G26370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121793 RHS17 "root hair specific 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121909 AT4G24530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00038663001
SubName- Full=Chromosome chr18 scaffold_96, whole genome shotgun sequence; (572 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query523
cd11299290 cd11299, O-FucT_plant, GDP-fucose protein O-fucosy 1e-149
pfam10250315 pfam10250, O-FucT, GDP-fucose protein O-fucosyltra 1e-110
cd11296206 cd11296, O-FucT_like, GDP-fucose protein O-fucosyl 1e-12
>gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily Back     alignment and domain information
 Score =  428 bits (1103), Expect = e-149
 Identities = 167/336 (49%), Positives = 211/336 (62%), Gaps = 48/336 (14%)

Query: 159 FLIIEANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHA 218
           +L++ ANGGLNQQR  ICDAVAVA LLNATLV+P    NSVW DSS FGDI+D D F+ +
Sbjct: 1   YLLVSANGGLNQQRSQICDAVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKS 60

Query: 219 LRSNVNVVKELPEDILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFS 278
           L+ +V VVK+LPE++  +       I   RV   SSP++YL++VLP L+  G +R+APF 
Sbjct: 61  LKDDVRVVKKLPEELASKKPE----ITVKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPFD 116

Query: 279 NRLA-QGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFE 337
           +RLA   +P  IQ LRC  NF ALRF   I  L +K+VDR+ +     GG ++++HLRFE
Sbjct: 117 SRLANDLLPPEIQRLRCRVNFHALRFVPEIEELGDKLVDRLREA----GGPFLALHLRFE 172

Query: 338 TDMVAFSCCEYDGGEEEKREMDIARERSWRGKFRKRGRVIRPGANRVDGKCPLTPLEVGM 397
            DM+AFS C                                       GKCPLTP EVG+
Sbjct: 173 KDMLAFSGC---------------------------------------GKCPLTPEEVGL 193

Query: 398 MLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLA 457
           +LR +GF  +T +Y+AAG+IY  E+ + PLR +FP L TK+TLAT EELA F GHSSRLA
Sbjct: 194 LLRALGFPRSTRIYLAAGEIYGGERRLDPLRSIFPNLYTKETLATAEELAPFSGHSSRLA 253

Query: 458 ALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGH 493
           ALDY VCL S+VFV T GGNF   + GHRRYL    
Sbjct: 254 ALDYIVCLESDVFVPTYGGNFAKAVAGHRRYLGHRK 289


Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290

>gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase Back     alignment and domain information
>gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 523
PF10250351 O-FucT: GDP-fucose protein O-fucosyltransferase; I 100.0
KOG3849386 consensus GDP-fucose protein O-fucosyltransferase 97.54
PF05830321 NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 95.06
>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats Back     alignment and domain information
Probab=100.00  E-value=1.5e-56  Score=451.31  Aligned_cols=306  Identities=37%  Similarity=0.635  Sum_probs=208.1

Q ss_pred             ecCchhHHHHHHHHHHHHHHHhcCeEeccccccCccccCCCC-----CCCCCChHHHHHHhcccchhcccCchHHHhhhc
Q 009877          164 ANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSN-----FGDIFDEDFFMHALRSNVNVVKELPEDILQQFD  238 (523)
Q Consensus       164 ~nGGLNQqR~~IcdaVavAriLNATLVlP~l~~~s~W~D~S~-----F~dIFD~dhFI~sL~~dVrIVk~LP~~~~~~~~  238 (523)
                      |.||+||||.++++||++|++||+|||||.+.....|+|.++     |+++||+++|++.++++|.+.+.+|..+.....
T Consensus         6 ~~GGfnNQr~~~~~a~~~A~~LnRTLVLPp~~~~~~~~~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~~~~~~~~~   85 (351)
T PF10250_consen    6 CMGGFNNQRMGFENAVVFAKALNRTLVLPPFIKHYHWKDQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFLPKHWDEVFR   85 (351)
T ss_dssp             -SSSHHHHHHHHHHHHHHHHHHT-EEE--EEEEESSSS----EEEEEHHHHB-HHHHTTTS--EE-HHHHHHHHS-GGG-
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhCCEEEcCCccccccccccccccccChhhhccHHHHHHHhhCceehheeccchhccccc
Confidence            899999999999999999999999999999999999999988     999999999999999999999999876544221


Q ss_pred             ccc-------------------------cceeeccccc-CCChhhHHhhhhhhhhhc------ceEEEcCCccccccC-C
Q 009877          239 HNI-------------------------SSIVNLRVKG-WSSPTHYLQKVLPKLQHL------GAVRIAPFSNRLAQG-V  285 (523)
Q Consensus       239 ~~~-------------------------~~~~~~~~~~-~s~~~yY~~~vlP~l~k~------~Vi~l~~f~~rLa~~-l  285 (523)
                      ...                         .......... |+.+.+|.++++|.+.++      +++.|.++...+..+ .
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  165 (351)
T PF10250_consen   86 LQYCWSPWESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDNYL  165 (351)
T ss_dssp             EEEESS-B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--GG
T ss_pred             hhhcccccccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccchhccc
Confidence            100                         0112222333 788999999999999887      999999999999876 7


Q ss_pred             CCccccccceecccccccchhHHHHHHHHHHHHhhcccCCCCceEEEeecccchhhhhccccCCCChhHHHHHHHHHHhh
Q 009877          286 PSNIQGLRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKREMDIARERS  365 (523)
Q Consensus       286 P~diQrLRCrvnf~ALrF~~~I~~lg~~lV~Rmr~~s~~~~g~yiAlHLRfE~DMlAfsgC~~~~~~~E~~eL~~~R~~~  365 (523)
                      +.++|+        +|+|+++|+++|++++++|+.    .+++|||+|||+|+||  +++|.+++   ++..|..+|.. 
T Consensus       166 ~~~~~r--------~l~~~~~i~~~a~~~i~~~~~----~~~~yiavHlR~~~D~--~~~C~~~~---~~~~~~~~~~~-  227 (351)
T PF10250_consen  166 DRDLQR--------YLRFSPEIRELADKFIKRLLA----GGGPYIAVHLRRGKDW--FSACEFKG---ERHLLASPRCW-  227 (351)
T ss_dssp             GGGGGG--------G--B-HHHHHHHHHHHHHH--------SSEEEEEE--SHHH--HHHHCT-T-------TTTHHHH-
T ss_pred             CccceE--------EEecCHHHHHHHHHHHHHhhc----ccCceEEEeecccCch--HhhcccCC---chHHHHHhHhh-
Confidence            788887        999999999999999999993    4689999999999999  88999955   66777777754 


Q ss_pred             hccccccCCcccCCcccccCCCCCCCHHHHHHHHhhcCCCCCcEEEEeeccccCccccchhHHhhCCCccccccCCCHHH
Q 009877          366 WRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEE  445 (523)
Q Consensus       366 wk~k~~~~~~~i~~~~~R~~G~CPLTPeEvgl~LralGf~~~T~IYlAsGeiyGg~~~m~pL~~~FPnl~tKe~L~s~eE  445 (523)
                       ..+      .+++.+.+..+.||++|++++.+++++|+.+.|.||||++++|||++.|.+|+++||++++|+++.+.+|
T Consensus       228 -~~~------~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~  300 (351)
T PF10250_consen  228 -GKK------SINPEKKRRNGCCPSTPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLKNMFPNVVTKDDLLSHEE  300 (351)
T ss_dssp             --GG------GTT-----HHHHS--HHHHHHHHHHHHHHHT-SEEEEEESS-----------HHHHHHHHGGGT--EE--
T ss_pred             -ccc------cccchhhhhcCCCCChHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHHHHhhhhEeccccCCHHH
Confidence             222      5678889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhccccchhhhheeeeeccceeeecCCCChhhhhhhhhhcccCCcccc
Q 009877          446 LAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKT  496 (523)
Q Consensus       446 L~pf~~~ss~lAALDYiVcl~SDVFv~t~~GNfa~~V~GhR~y~~~G~~kT  496 (523)
                      +++|.+  +++|+||++||++||+||+|..++|+.+|+++|+|.+..++||
T Consensus       301 ~~~~~~--~~~a~vD~~i~~~s~~Figt~~Stfs~~i~~~R~~~g~~~~~~  349 (351)
T PF10250_consen  301 LEPLND--DQLAMVDQEICSRSDVFIGTCGSTFSSNIARERHYRGKPKRKS  349 (351)
T ss_dssp             S-------S--HHHHHHHHHHSSEEEE-TT-HHHHHHHHHHHHSSSS---E
T ss_pred             hhhccc--cchhHHHHHHHhcCCEEEecCcchhHHHhhcccCcCCCCCCCC
Confidence            999986  8999999999999999999998899999999999984444344



Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.

>KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query523
3zy2_A362 Putative GDP-fucose protein O-fucosyltransferase; 3e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-04
>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Length = 362 Back     alignment and structure
 Score = 45.1 bits (106), Expect = 3e-05
 Identities = 26/172 (15%), Positives = 54/172 (31%), Gaps = 34/172 (19%)

Query: 301 LRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKREMDI 360
           LR+S  I   A+K +   +         +V+VHLR + D V    CE+      +     
Sbjct: 191 LRWSSRITEQAKKFISANL------AKPFVAVHLRNDADWVRV--CEHIDTTTNRPLFAS 242

Query: 361 ARERSWRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLR-GMGFDNTTSVYVAAGKIYK 419
            +            + I          C  +  ++   +   +G     SV+VA+     
Sbjct: 243 EQCLGEGHHLGTLTKEI----------CSPSKQQILEQIVEKVGSIGAKSVFVAS----D 288

Query: 420 AEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFV 471
            +  +  + +     E +     P+                  +   +++FV
Sbjct: 289 KDHMIDEINEALKPYEIEAHRQEPD-----------DMYTSLAIMGRADLFV 329


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query523
4ap5_A408 GDP-fucose protein O-fucosyltransferase 2; GT-B, G 99.58
3zy2_A362 Putative GDP-fucose protein O-fucosyltransferase; 99.12
2hhc_A330 NODZ, nodulation fucosyltransferase NODZ; glycosyl 97.45
2de0_X526 Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran 97.36
>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* Back     alignment and structure
Probab=99.58  E-value=9.4e-15  Score=151.25  Aligned_cols=304  Identities=17%  Similarity=0.269  Sum_probs=167.0

Q ss_pred             CCCCcEEEEEec-C-chhHHHHHHHHHHHHHHHhcCe----EeccccccCccccCCC------CCCCCCChHHHHHHhcc
Q 009877          154 PKSNGFLIIEAN-G-GLNQQRLSICDAVAVAGLLNAT----LVIPIFHLNSVWRDSS------NFGDIFDEDFFMHALRS  221 (523)
Q Consensus       154 ~~snGYL~V~~n-G-GLNQqR~~IcdaVavAriLNAT----LVlP~l~~~s~W~D~S------~F~dIFD~dhFI~sL~~  221 (523)
                      ...++||+-..| | |.|.||...-.|.+.|+.||.|    ||||-...---|+-.+      .|++.||++++    +.
T Consensus        19 ~~~~rYl~y~~~~g~Gfn~qrd~f~~~a~~a~~Lnrt~~~~LVLPPw~~~~h~~~~~~~~~~ipf~~fFDv~~L----~~   94 (408)
T 4ap5_A           19 ASRRRYLLYDVNPPEGFNLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSL----NK   94 (408)
T ss_dssp             -CCCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTTSCEEEEECCBCCSCGGGSTTSCCCSBCGGGTBCHHHH----HT
T ss_pred             ccccceEEecCCCCCcccHHHHHHHHHHHHHHHHhCcCCcEEEeCCCcccccccCCcccceeccHHHhcCHHHH----Hh
Confidence            467899998864 5 8999999999999999999999    9999664333355432      59999999864    55


Q ss_pred             cchhcccCchHHHhhhcccc-cceeecc--ccc-----C-----------------------CChhhHHhhhhhhhhhcc
Q 009877          222 NVNVVKELPEDILQQFDHNI-SSIVNLR--VKG-----W-----------------------SSPTHYLQKVLPKLQHLG  270 (523)
Q Consensus       222 dVrIVk~LP~~~~~~~~~~~-~~~~~~~--~~~-----~-----------------------s~~~yY~~~vlP~l~k~~  270 (523)
                      .|+|+..  +++++..+... ..+....  ...     |                       .++.|=...+  ......
T Consensus        95 ~vpVI~m--eeFl~~~~~~~~~~v~~l~~~~~~~~~~~~~~k~~~~~c~~~~~~~~~~~~~~~gpfw~~~~v--~~~~~~  170 (408)
T 4ap5_A           95 NIPVIEY--EQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFWGYEET--RGLNVS  170 (408)
T ss_dssp             TSCEEEH--HHHHHHSSSSEEEEEEEEECCTTCCCTTCCCCCEEEECCSSCCSCEECTTSCEECCGGGCTTC--EEEEEE
T ss_pred             hCCeeEH--HHHHHHhCCCCCcceeeccccHhhcccccccchhhhhhhhhccccccccccCccCCccccccc--ccCCce
Confidence            6677643  44443221110 0000000  000     0                       0111100000  001111


Q ss_pred             eEEEcCCcccccc----CCCCc---cccc-cceec----------ccccccchhHHHHHHHHHHHHhhcccCCCCceEEE
Q 009877          271 AVRIAPFSNRLAQ----GVPSN---IQGL-RCLAN----------FEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSV  332 (523)
Q Consensus       271 Vi~l~~f~~rLa~----~lP~d---iQrL-RCrvn----------f~ALrF~~~I~~lg~~lV~Rmr~~s~~~~g~yiAl  332 (523)
                      -+.+.+..+.+..    ..|..   +.+. .+.+.          -..|+|.+.|.+.|++.++..-.      ++|+++
T Consensus       171 c~~~~~~~~~~~~~~~~~~~~~s~~v~~~e~~l~~~~~~~~~~~~~r~l~~s~~l~~~a~~fi~~~L~------~~~~~~  244 (408)
T 4ap5_A          171 CLSVQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTRRSMVFARHLREVGDEFRSRHLN------STDDAD  244 (408)
T ss_dssp             EEEECSBGGGGHHHHHHCTTCSEEEEESGGGSBCSSTTSHHHHHHHHTCCBCHHHHHHHHHHHHHHHC------CCTTTT
T ss_pred             eEEEeecchhhhhhhhhcCChhhhhhhhcccCCccccchHhhhhHHHHhhhhHHHHHHHHHHHHHHhC------ccccee
Confidence            1222222222110    00100   0000 01111          13689999999999998887652      366677


Q ss_pred             eecccchhhhhccccCCCChhHHHHHHHHHHhhhccccccCCcccCCcccccCC-CCCCCHHHHHHHHhhcCCCCCcEEE
Q 009877          333 HLRFETDMVAFSCCEYDGGEEEKREMDIARERSWRGKFRKRGRVIRPGANRVDG-KCPLTPLEVGMMLRGMGFDNTTSVY  411 (523)
Q Consensus       333 HLRfE~DMlAfsgC~~~~~~~E~~eL~~~R~~~wk~k~~~~~~~i~~~~~R~~G-~CPLTPeEvgl~LralGf~~~T~IY  411 (523)
                      |+|.+.|+...  |.......         ...+..-+.|++     +-..... .||-.++-+..+.+.|-=.+-+.||
T Consensus       245 h~r~~~dw~~~--~~~~~~~~---------~~~y~~~H~Rr~-----d~~~~~~~~~ps~~~~~~~i~~~~~~~~~~~Vy  308 (408)
T 4ap5_A          245 RIPFQEDWMKM--KVKLGSAL---------GGPYLGVHLRRK-----DFIWGHRQDVPSLEGAVRKIRSLMKTHRLDKVF  308 (408)
T ss_dssp             TCCCCSSGGGC--CCCTTCBC---------CEEEEEEEECCT-----TTTTTTCSSSCCHHHHHHHHHHHHHHHTCSCEE
T ss_pred             ecccchhHhhh--hccccccc---------CCCccccccccc-----cchhhhhccCCCHHHHHHHHHHHHHhcCCCEEE
Confidence            77776666553  32211100         000111111111     0001111 2333222223333323222445899


Q ss_pred             EeeccccCccccchhHHhhCCCccccccCCCHHHHhhhhccccchhhhheeeeeccceeeecCCCChhhhhhhhhhcccC
Q 009877          412 VAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYG  491 (523)
Q Consensus       412 lAsGeiyGg~~~m~pL~~~FPnl~tKe~L~s~eEL~pf~~~ss~lAALDYiVcl~SDVFv~t~~GNfa~~V~GhR~y~~~  491 (523)
                      ||+-+   .+..+..|++.+|.++.-..  ..+++..+.  ...+|.||-+||.+||+||+|..++|+..|.=.|-++  
T Consensus       309 iATD~---~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~--d~~~a~idq~Ic~~a~~FiGt~~StfS~~I~~eR~~~--  379 (408)
T 4ap5_A          309 VATDA---VRKEYEELKKLLPEMVRFEP--TWEELELYK--DGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREIL--  379 (408)
T ss_dssp             EEECC---CHHHHHHHHHHCTTEECCCC--CHHHHHHHH--HHHHHHHHHHHHHTEEEEEBCTTCHHHHHHHHHHHHH--
T ss_pred             EeCCC---chhHHHHHHHhCCCcEEecC--cchhhhccC--cchhhHHHHHHHHhCCeeEeCCcCchhHHHHHHHHhc--
Confidence            99875   24457889999998764332  345666664  4567999999999999999999999999999999987  


Q ss_pred             Ccccc
Q 009877          492 GHAKT  496 (523)
Q Consensus       492 G~~kT  496 (523)
                      |+.+.
T Consensus       380 G~~~~  384 (408)
T 4ap5_A          380 GLDPK  384 (408)
T ss_dssp             TBCGG
T ss_pred             CCCCC
Confidence            87643



>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Back     alignment and structure
>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* Back     alignment and structure
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00