Citrus Sinensis ID: 009890
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 523 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SCV4 | 852 | Beta-galactosidase 8 OS=A | yes | no | 0.950 | 0.583 | 0.826 | 0.0 | |
| Q10NX8 | 858 | Beta-galactosidase 6 OS=O | no | no | 0.950 | 0.579 | 0.759 | 0.0 | |
| P45582 | 832 | Beta-galactosidase OS=Asp | N/A | no | 0.927 | 0.582 | 0.668 | 0.0 | |
| Q9SCW1 | 847 | Beta-galactosidase 1 OS=A | no | no | 0.969 | 0.598 | 0.642 | 0.0 | |
| P48980 | 835 | Beta-galactosidase OS=Sol | N/A | no | 0.931 | 0.583 | 0.653 | 0.0 | |
| Q9SCV9 | 856 | Beta-galactosidase 3 OS=A | no | no | 0.975 | 0.595 | 0.609 | 0.0 | |
| Q6Z6K4 | 729 | Beta-galactosidase 4 OS=O | no | no | 0.927 | 0.665 | 0.624 | 0.0 | |
| Q5Z7L0 | 715 | Beta-galactosidase 9 OS=O | no | no | 0.923 | 0.675 | 0.627 | 0.0 | |
| A2X2H7 | 729 | Beta-galactosidase 4 OS=O | N/A | no | 0.927 | 0.665 | 0.624 | 0.0 | |
| Q9SCV3 | 887 | Beta-galactosidase 9 OS=A | no | no | 0.984 | 0.580 | 0.594 | 0.0 |
| >sp|Q9SCV4|BGAL8_ARATH Beta-galactosidase 8 OS=Arabidopsis thaliana GN=BGAL8 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/497 (82%), Positives = 446/497 (89%)
Query: 25 ANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEP 84
ANVTYDHRA+VI GKR+VLISGSIHYPRSTPEMWP+LIQKSKDGGLDVIETYVFW+ HEP
Sbjct: 30 ANVTYDHRALVIDGKRKVLISGSIHYPRSTPEMWPELIQKSKDGGLDVIETYVFWSGHEP 89
Query: 85 VRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDN 144
+N+YNFEGRYDLVKFVKL A+AGLY HLRIGPYVCAEWN+GGFP+WLHF+PGI+FRTDN
Sbjct: 90 EKNKYNFEGRYDLVKFVKLAAKAGLYVHLRIGPYVCAEWNYGGFPVWLHFVPGIKFRTDN 149
Query: 145 EPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAG 204
EPFK EMQRFT KIVD+MKQEKLYASQGGPIILSQIENEYGNIDSAYGAA KSYIKW+A
Sbjct: 150 EPFKEEMQRFTTKIVDLMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAAKSYIKWSAS 209
Query: 205 MALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNNKPKMWTENWSGWFLSFGGA 264
MALSLDTGVPW MCQQ+DAPDP+INTCNGFYCDQFTPNSNNKPKMWTENWSGWFL FG
Sbjct: 210 MALSLDTGVPWNMCQQTDAPDPMINTCNGFYCDQFTPNSNNKPKMWTENWSGWFLGFGDP 269
Query: 265 VPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLI 324
PYRPVEDLAFAVARF+QRGGTFQNYYMYHGGTNFDRTSGGP ISTSYDYDAP+DEYGL+
Sbjct: 270 SPYRPVEDLAFAVARFYQRGGTFQNYYMYHGGTNFDRTSGGPLISTSYDYDAPIDEYGLL 329
Query: 325 RQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVYKTGSGLCSAFLANIGTNSD 384
RQPKWGHL+DLHKAIKLCE AL+ATDPT SLG NLEA VYKT SG C+AFLAN+ T SD
Sbjct: 330 RQPKWGHLRDLHKAIKLCEDALIATDPTITSLGSNLEAAVYKTESGSCAAFLANVDTKSD 389
Query: 385 VTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSFSRQSLQVAADSSDAIGSG 444
TV FNG SY LPAWSVSILPDCKNV FNTAKINS T +F+RQSL+ SS +GS
Sbjct: 390 ATVTFNGKSYNLPAWSVSILPDCKNVAFNTAKINSATESTAFARQSLKPDGGSSAELGSQ 449
Query: 445 WSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLSTNIKADEPLLEDGSKTVLHV 504
WSYI EP+GISK DAF KPGLLEQINTTAD+SDYLWYSL T+IK DE L++GSK VLH+
Sbjct: 450 WSYIKEPIGISKADAFLKPGLLEQINTTADKSDYLWYSLRTDIKGDETFLDEGSKAVLHI 509
Query: 505 QSLGHALHAFINGKLVG 521
+SLG ++AFINGKL G
Sbjct: 510 ESLGQVVYAFINGKLAG 526
|
Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 3 |
| >sp|Q10NX8|BGAL6_ORYSJ Beta-galactosidase 6 OS=Oryza sativa subsp. japonica GN=Os03g0255100 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/504 (75%), Positives = 433/504 (85%), Gaps = 7/504 (1%)
Query: 22 SFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNL 81
S ANVTYDHRAVVI G RRVL+SGSIHYPRSTP+MWP LIQKSKDGGLDVIETYVFW++
Sbjct: 28 SRAANVTYDHRAVVIDGVRRVLVSGSIHYPRSTPDMWPGLIQKSKDGGLDVIETYVFWDI 87
Query: 82 HEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFR 141
HE VR QY+FEGR DLV+FVK VA+AGLY HLRIGPYVCAEWN+GGFP+WLHF+PGI+FR
Sbjct: 88 HEAVRGQYDFEGRKDLVRFVKAVADAGLYVHLRIGPYVCAEWNYGGFPVWLHFVPGIKFR 147
Query: 142 TDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKW 201
TDNE FKAEMQRFT K+VD MK LYASQGGPIILSQIENEYGNIDSAYGAAGK+Y++W
Sbjct: 148 TDNEAFKAEMQRFTEKVVDTMKGAGLYASQGGPIILSQIENEYGNIDSAYGAAGKAYMRW 207
Query: 202 AAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNNKPKMWTENWSGWFLSF 261
AAGMA+SLDTGVPWVMCQQSDAPDP+INTCNGFYCDQFTPNS +KPKMWTENWSGWFLSF
Sbjct: 208 AAGMAVSLDTGVPWVMCQQSDAPDPLINTCNGFYCDQFTPNSKSKPKMWTENWSGWFLSF 267
Query: 262 GGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEY 321
GGAVPYRP EDLAFAVARF+QRGGTFQNYYMYHGGTNF R++GGPFI+TSYDYDAP+DEY
Sbjct: 268 GGAVPYRPAEDLAFAVARFYQRGGTFQNYYMYHGGTNFGRSTGGPFIATSYDYDAPIDEY 327
Query: 322 GLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVYKTG-SGLCSAFLANIG 380
G++RQPKWGHL+D+HKAIKLCE AL+A +P+Y SLG N EATVY+T + +C+AFLAN+
Sbjct: 328 GMVRQPKWGHLRDVHKAIKLCEPALIAAEPSYSSLGQNTEATVYQTADNSICAAFLANVD 387
Query: 381 TNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSFSR--QSLQVAADS- 437
SD TVKFNGN+Y LPAWSVSILPDCKNVV NTA+INS S+Q DS
Sbjct: 388 AQSDKTVKFNGNTYKLPAWSVSILPDCKNVVLNTAQINSQVTTSEMRSLGSSIQDTDDSL 447
Query: 438 --SDAIGSGWSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLSTNIKADEPLLE 495
+ +GWSY EPVGI+K++A TKPGL+EQINTTAD SD+LWYS S +K DEP L
Sbjct: 448 ITPELATAGWSYAIEPVGITKENALTKPGLMEQINTTADASDFLWYSTSIVVKGDEPYL- 506
Query: 496 DGSKTVLHVQSLGHALHAFINGKL 519
+GS++ L V SLGH L +INGKL
Sbjct: 507 NGSQSNLLVNSLGHVLQIYINGKL 530
|
Releases galactose by hydrolysis of plant cell wall galactose-containing polysaccharides such as galacto-xyloglucan, pectic galactan and galactan (in vitro). Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|P45582|BGAL_ASPOF Beta-galactosidase OS=Asparagus officinalis PE=2 SV=1 | Back alignment and function description |
|---|
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/497 (66%), Positives = 386/497 (77%), Gaps = 12/497 (2%)
Query: 25 ANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEP 84
A+VTYDH++V+I G+RR+LISGSIHYPRSTPEMWPDLIQK+KDGGLDVI+TYVFWN HEP
Sbjct: 25 ASVTYDHKSVIINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEP 84
Query: 85 VRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDN 144
QY F GRYDLV+F+KLV +AGLYAHLRIGPYVCAEWNFGGFP+WL ++PGI FRTDN
Sbjct: 85 SPGQYYFGGRYDLVRFLKLVKQAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGIHFRTDN 144
Query: 145 EPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAG 204
PFKA M +FT KIV MMK E LY +QGGPIILSQIENEYG ++ GAAGKSY WAA
Sbjct: 145 GPFKAAMGKFTEKIVSMMKAEGLYETQGGPIILSQIENEYGPVEYYDGAAGKSYTNWAAK 204
Query: 205 MALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNNKPKMWTENWSGWFLSFGGA 264
MA+ L+TGVPWVMC+Q DAPDP+INTCNGFYCD F+PN +NKPKMWTE W+GWF FGGA
Sbjct: 205 MAVGLNTGVPWVMCKQDDAPDPVINTCNGFYCDYFSPNKDNKPKMWTEAWTGWFTGFGGA 264
Query: 265 VPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLI 324
VP RP ED+AFAVARF Q+GG+F NYYMYHGGTNF RT+GGPFISTSYDYDAP+DEYGL+
Sbjct: 265 VPQRPAEDMAFAVARFIQKGGSFINYYMYHGGTNFGRTAGGPFISTSYDYDAPIDEYGLL 324
Query: 325 RQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVYKTGSGLCSAFLANIGTNSD 384
RQPKWGHL+DLHKAIKLCE ALV+ +PT SLG N E+ VY++ S C+AFLAN +
Sbjct: 325 RQPKWGHLRDLHKAIKLCEPALVSGEPTITSLGQNQESYVYRSKSS-CAAFLANFNSRYY 383
Query: 385 VTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSFSRQSLQVAADSSDAIGSG 444
TV FNG Y LP WSVSILPDCK VFNTA++ + T + Q L G
Sbjct: 384 ATVTFNGMHYNLPPWSVSILPDCKTTVFNTARVGAQTT--TMKMQYLG---------GFS 432
Query: 445 WSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLSTNIKADEPLLEDGSKTVLHV 504
W E D+ FTK GL+EQ++TT D+SDYLWY+ +I +E L+ G L V
Sbjct: 433 WKAYTEDTDALNDNTFTKDGLVEQLSTTWDRSDYLWYTTYVDIAKNEEFLKTGKYPYLTV 492
Query: 505 QSLGHALHAFINGKLVG 521
S GHA+H FING+L G
Sbjct: 493 MSAGHAVHVFINGQLSG 509
|
Asparagus officinalis (taxid: 4686) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q9SCW1|BGAL1_ARATH Beta-galactosidase 1 OS=Arabidopsis thaliana GN=BGAL1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/521 (64%), Positives = 388/521 (74%), Gaps = 14/521 (2%)
Query: 1 MASKEILLLVLCWGFVVLATTSFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPD 60
MA+ L L+ GF+V + + +V+YD RA+ I GKRR+LISGSIHYPRSTPEMWPD
Sbjct: 14 MAAVSALFLL---GFLVCSVS---GSVSYDSRAITINGKRRILISGSIHYPRSTPEMWPD 67
Query: 61 LIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVC 120
LI+K+K+GGLDVI+TYVFWN HEP +Y FEG YDLVKFVKLV ++GLY HLRIGPYVC
Sbjct: 68 LIRKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFVKLVQQSGLYLHLRIGPYVC 127
Query: 121 AEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQI 180
AEWNFGGFP+WL +IPGI FRTDN PFKA+MQRFT KIV+MMK E+L+ SQGGPIILSQI
Sbjct: 128 AEWNFGGFPVWLKYIPGISFRTDNGPFKAQMQRFTTKIVNMMKAERLFESQGGPIILSQI 187
Query: 181 ENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFT 240
ENEYG ++ GA G+SY WAA MA+ L TGVPWVMC+Q DAPDPIIN CNGFYCD F+
Sbjct: 188 ENEYGPMEYELGAPGRSYTNWAAKMAVGLGTGVPWVMCKQDDAPDPIINACNGFYCDYFS 247
Query: 241 PNSNNKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFD 300
PN KPKMWTE W+GWF FGG VPYRP ED+AF+VARF Q+GG+F NYYMYHGGTNF
Sbjct: 248 PNKAYKPKMWTEAWTGWFTKFGGPVPYRPAEDMAFSVARFIQKGGSFINYYMYHGGTNFG 307
Query: 301 RTSGGPFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNL 360
RT+GGPFI+TSYDYDAPLDEYGL RQPKWGHLKDLH+AIKLCE ALV+ +PT LG
Sbjct: 308 RTAGGPFIATSYDYDAPLDEYGLERQPKWGHLKDLHRAIKLCEPALVSGEPTRMPLGNYQ 367
Query: 361 EATVYKTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSV 420
EA VYK+ SG CSAFLAN S V F N Y LP WS+SILPDCKN V+NTA++ +
Sbjct: 368 EAHVYKSKSGACSAFLANYNPKSYAKVSFGNNHYNLPPWSISILPDCKNTVYNTARVGAQ 427
Query: 421 TLVPSFSRQSLQVAADSSDAIGSGWSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLW 480
T R + G W NE D++FT GL+EQINTT D SDYLW
Sbjct: 428 TSRMKMVRVPVHG--------GLSWQAYNEDPSTYIDESFTMVGLVEQINTTRDTSDYLW 479
Query: 481 YSLSTNIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVG 521
Y + A+E L +G L V S GHA+H FING+L G
Sbjct: 480 YMTDVKVDANEGFLRNGDLPTLTVLSAGHAMHVFINGQLSG 520
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|P48980|BGAL_SOLLC Beta-galactosidase OS=Solanum lycopersicum PE=1 SV=1 | Back alignment and function description |
|---|
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/497 (65%), Positives = 377/497 (75%), Gaps = 10/497 (2%)
Query: 25 ANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEP 84
A+V+YDH+A+++ G+R++LISGSIHYPRSTPEMWPDLIQK+K+GG+DVI+TYVFWN HEP
Sbjct: 22 ASVSYDHKAIIVNGQRKILISGSIHYPRSTPEMWPDLIQKAKEGGVDVIQTYVFWNGHEP 81
Query: 85 VRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDN 144
+Y FE RYDLVKF+K+V EAGLY HLRIGPY CAEWNFGGFP+WL ++PGI FRT+N
Sbjct: 82 EEGKYYFEERYDLVKFIKVVQEAGLYVHLRIGPYACAEWNFGGFPVWLKYVPGISFRTNN 141
Query: 145 EPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAG 204
EPFKA MQ+FT KIVDMMK EKLY +QGGPIILSQIENEYG ++ G GK Y +WAA
Sbjct: 142 EPFKAAMQKFTTKIVDMMKAEKLYETQGGPIILSQIENEYGPMEWELGEPGKVYSEWAAK 201
Query: 205 MALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNNKPKMWTENWSGWFLSFGGA 264
MA+ L TGVPW+MC+Q D PDPIINTCNGFYCD FTPN NKPKMWTE W+ WF FGG
Sbjct: 202 MAVDLGTGVPWIMCKQDDVPDPIINTCNGFYCDYFTPNKANKPKMWTEAWTAWFTEFGGP 261
Query: 265 VPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLI 324
VPYRP ED+AFAVARF Q GG+F NYYMYHGGTNF RTSGGPFI+TSYDYDAPLDE+G +
Sbjct: 262 VPYRPAEDMAFAVARFIQTGGSFINYYMYHGGTNFGRTSGGPFIATSYDYDAPLDEFGSL 321
Query: 325 RQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVYKTGSGLCSAFLANIGTNSD 384
RQPKWGHLKDLH+AIKLCE ALV+ DPT SLG EA V+K+ SG C+AFLAN +S
Sbjct: 322 RQPKWGHLKDLHRAIKLCEPALVSVDPTVTSLGNYQEARVFKSESGACAAFLANYNQHSF 381
Query: 385 VTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSFSRQSLQVAADSSDAIGSG 444
V F Y LP WS+SILPDCKN V+NTA++ + QS Q+ + + G
Sbjct: 382 AKVAFGNMHYNLPPWSISILPDCKNTVYNTARVGA---------QSAQMKM-TPVSRGFS 431
Query: 445 WSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLSTNIKADEPLLEDGSKTVLHV 504
W NE +DD FT GLLEQIN T D SDYLWY I E L G+ L V
Sbjct: 432 WESFNEDAASHEDDTFTVVGLLEQINITRDVSDYLWYMTDIEIDPTEGFLNSGNWPWLTV 491
Query: 505 QSLGHALHAFINGKLVG 521
S GHALH F+NG+L G
Sbjct: 492 FSAGHALHVFVNGQLAG 508
|
Involved in cell wall degradation. Degrades polysaccharides containing beta-(1-->4)-linked galactans, acting as an exo-(1-->4)-beta-D-galactanase. Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q9SCV9|BGAL3_ARATH Beta-galactosidase 3 OS=Arabidopsis thaliana GN=BGAL3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/520 (60%), Positives = 380/520 (73%), Gaps = 10/520 (1%)
Query: 3 SKEILLLVLCWGFVVLATTSFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLI 62
S L+L C GF++L VTYD +A++I G+RR+L SGSIHYPRSTP+MW DLI
Sbjct: 9 SASRLILWFCLGFLILGVGFVQCGVTYDRKALLINGQRRILFSGSIHYPRSTPDMWEDLI 68
Query: 63 QKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAE 122
QK+KDGG+DVIETYVFWNLHEP +Y+FEGR DLV+FVK + +AGLYAHLRIGPYVCAE
Sbjct: 69 QKAKDGGIDVIETYVFWNLHEPSPGKYDFEGRNDLVRFVKTIHKAGLYAHLRIGPYVCAE 128
Query: 123 WNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIEN 182
WNFGGFP+WL ++PGI FRTDNEPFK M+ FT +IV++MK E L+ SQGGPIILSQIEN
Sbjct: 129 WNFGGFPVWLKYVPGISFRTDNEPFKRAMKGFTERIVELMKSENLFESQGGPIILSQIEN 188
Query: 183 EYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPN 242
EYG GA G +Y+ WAA MA++ +TGVPWVMC++ DAPDP+INTCNGFYCD F PN
Sbjct: 189 EYGRQGQLLGAEGHNYMTWAAKMAIATETGVPWVMCKEDDAPDPVINTCNGFYCDSFAPN 248
Query: 243 SNNKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRT 302
KP +WTE WSGWF FGG + +RPV+DLAF VARF Q+GG+F NYYMYHGGTNF RT
Sbjct: 249 KPYKPLIWTEAWSGWFTEFGGPMHHRPVQDLAFGVARFIQKGGSFVNYYMYHGGTNFGRT 308
Query: 303 SGGPFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEA 362
+GGPF++TSYDYDAP+DEYGLIRQPK+GHLK+LH+AIK+CE ALV+ DP S+G +A
Sbjct: 309 AGGPFVTTSYDYDAPIDEYGLIRQPKYGHLKELHRAIKMCEKALVSADPVVTSIGNKQQA 368
Query: 363 TVYKTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTL 422
VY SG CSAFLAN T S V FN Y LP WS+SILPDC+N VFNTAK+
Sbjct: 369 HVYSAESGDCSAFLANYDTESAARVLFNNVHYNLPPWSISILPDCRNAVFNTAKVGV--- 425
Query: 423 VPSFSRQSLQVAADSSDAIGSGW-SYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWY 481
Q+ Q+ +D W SY+ + + FT GLLEQIN T D SDYLWY
Sbjct: 426 ------QTSQMEMLPTDTKNFQWESYLEDLSSLDDSSTFTTHGLLEQINVTRDTSDYLWY 479
Query: 482 SLSTNIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVG 521
S +I E L G L +QS GHA+H F+NG+L G
Sbjct: 480 MTSVDIGDSESFLHGGELPTLIIQSTGHAVHIFVNGQLSG 519
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q6Z6K4|BGAL4_ORYSJ Beta-galactosidase 4 OS=Oryza sativa subsp. japonica GN=Os02g0219200 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/498 (62%), Positives = 375/498 (75%), Gaps = 13/498 (2%)
Query: 25 ANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEP 84
A V+YD R++VI G+RR+L+SGSIHYPRSTPEMWP LIQK+KDGGLDVI+TYVFWN HEP
Sbjct: 36 AAVSYDRRSLVINGRRRILLSGSIHYPRSTPEMWPGLIQKAKDGGLDVIQTYVFWNGHEP 95
Query: 85 VRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDN 144
V+ QY F RYDLV+FVKLV +AGLY HLRIGPYVCAEWNFGGFP+WL ++PG+ FRTDN
Sbjct: 96 VQGQYYFSDRYDLVRFVKLVKQAGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGVSFRTDN 155
Query: 145 EPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAG 204
PFKAEMQ+F KIV MMK E L+ QGGPII+SQ+ENE+G ++S G+ K Y WAA
Sbjct: 156 GPFKAEMQKFVEKIVSMMKSEGLFEWQGGPIIMSQVENEFGPMESVGGSGAKPYANWAAK 215
Query: 205 MALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNNKPKMWTENWSGWFLSFGGA 264
MA+ +TGVPWVMC+Q DAPDP+INTCNGFYCD F+PN N KP MWTE W+GWF SFGG
Sbjct: 216 MAVGTNTGVPWVMCKQDDAPDPVINTCNGFYCDYFSPNKNYKPSMWTEAWTGWFTSFGGG 275
Query: 265 VPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLI 324
VP+RPVEDLAFAVARF Q+GG+F NYYMYHGGTNF RT+GGPFI+TSYDYDAP+DE+GL+
Sbjct: 276 VPHRPVEDLAFAVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPIDEFGLL 335
Query: 325 RQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVYKTGSGLCSAFLANIGTNSD 384
RQPKWGHL+DLH+AIK E LV+ DPT S+G +A V+K +G C+AFL+N N+
Sbjct: 336 RQPKWGHLRDLHRAIKQAEPVLVSADPTIESIGSYEKAYVFKAKNGACAAFLSNYHMNTA 395
Query: 385 VTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSFSRQSLQVAADSSDAIGSG 444
V V+FNG Y LPAWS+SILPDCK VFNTA + TL+P + +
Sbjct: 396 VKVRFNGQQYNLPAWSISILPDCKTAVFNTATVKEPTLMPKM-----------NPVVRFA 444
Query: 445 WSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLSTNIKADEPLLEDGSKTVLHV 504
W +E D AFTK GL+EQ++ T D+SDYLWY+ NI ++ L G L V
Sbjct: 445 WQSYSEDTNSLSDSAFTKDGLVEQLSMTWDKSDYLWYTTYVNIGTND--LRSGQSPQLTV 502
Query: 505 QSLGHALHAFINGKLVGE 522
S GH++ F+NGK G
Sbjct: 503 YSAGHSMQVFVNGKSYGS 520
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q5Z7L0|BGAL9_ORYSJ Beta-galactosidase 9 OS=Oryza sativa subsp. japonica GN=Os06g0573600 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/494 (62%), Positives = 375/494 (75%), Gaps = 11/494 (2%)
Query: 28 TYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRN 87
TYDHR++ I G+RR+LISGSIHYPRSTPEMWPDLIQK+KDGGLDVI+TYVFWN HEPV+
Sbjct: 23 TYDHRSLTINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPVQG 82
Query: 88 QYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPF 147
QY F RYDLV+FVKLV +AGLY +LRIGPYVCAEWN+GGFP+WL ++PGI FRTDN PF
Sbjct: 83 QYYFSDRYDLVRFVKLVKQAGLYVNLRIGPYVCAEWNYGGFPVWLKYVPGISFRTDNGPF 142
Query: 148 KAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMAL 207
KA MQ F KIV MMK E L+ QGGPIIL+Q+ENEYG ++S G+ KSY+ WAA MA+
Sbjct: 143 KAAMQTFVEKIVSMMKSEGLFEWQGGPIILAQVENEYGPMESVMGSGAKSYVDWAAKMAV 202
Query: 208 SLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNNKPKMWTENWSGWFLSFGGAVPY 267
+ + GVPW+MC+Q DAPDP+INTCNGFYCD FTPNS NKP MWTE WSGWF +FGG VP
Sbjct: 203 ATNAGVPWIMCKQDDAPDPVINTCNGFYCDDFTPNSKNKPSMWTEAWSGWFTAFGGTVPQ 262
Query: 268 RPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLIRQP 327
RPVEDLAFAVARF Q+GG+F NYYMYHGGTNFDRT+GGPFI+TSYDYDAP+DEYGL+RQP
Sbjct: 263 RPVEDLAFAVARFIQKGGSFINYYMYHGGTNFDRTAGGPFIATSYDYDAPIDEYGLLRQP 322
Query: 328 KWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVYKTGSGLCSAFLANIGTNSDVTV 387
KWGHL +LHKAIK E ALVA DPT ++G +A V+++ SG C+AFL+N T++ V
Sbjct: 323 KWGHLTNLHKAIKQAETALVAGDPTVQNIGNYEKAYVFRSSSGDCAAFLSNFHTSAAARV 382
Query: 388 KFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSFSRQSLQVAADSSDAIGSGWSY 447
FNG Y LPAWS+S+LPDC+ V+NTA + + + A + A G W
Sbjct: 383 AFNGRRYDLPAWSISVLPDCRTAVYNTATVTAAS-----------SPAKMNPAGGFTWQS 431
Query: 448 INEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLSTNIKADEPLLEDGSKTVLHVQSL 507
E + AFTK GL+EQ++ T D+SDYLWY+ NI + E L+ G L V S
Sbjct: 432 YGEATNSLDETAFTKDGLVEQLSMTWDKSDYLWYTTYVNIDSGEQFLKSGQWPQLTVYSA 491
Query: 508 GHALHAFINGKLVG 521
GH++ F+NG+ G
Sbjct: 492 GHSVQVFVNGQYFG 505
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|A2X2H7|BGAL4_ORYSI Beta-galactosidase 4 OS=Oryza sativa subsp. indica GN=OsI_006270 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/498 (62%), Positives = 375/498 (75%), Gaps = 13/498 (2%)
Query: 25 ANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEP 84
A V+YD R++VI G+RR+L+SGSIHYPRSTPEMWP LIQK+KDGGLDVI+TYVFWN HEP
Sbjct: 36 AAVSYDRRSLVINGRRRILLSGSIHYPRSTPEMWPGLIQKAKDGGLDVIQTYVFWNGHEP 95
Query: 85 VRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDN 144
V+ QY F RYDLV+FVKLV +AGLY HLRIGPYVCAEWNFGGFP+WL ++PG+ FRTDN
Sbjct: 96 VQGQYYFSDRYDLVRFVKLVKQAGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGVSFRTDN 155
Query: 145 EPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAG 204
PFKAEMQ+F KIV MMK E L+ QGGPII+SQ+ENE+G ++S G+ K Y WAA
Sbjct: 156 GPFKAEMQKFVEKIVSMMKSEGLFEWQGGPIIMSQVENEFGPMESVGGSGAKPYANWAAK 215
Query: 205 MALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNNKPKMWTENWSGWFLSFGGA 264
MA+ +TGVPWVMC+Q DAPDP+INTCNGFYCD F+PN N KP MWTE W+GWF SFGG
Sbjct: 216 MAVRTNTGVPWVMCKQDDAPDPVINTCNGFYCDYFSPNKNYKPSMWTEAWTGWFTSFGGG 275
Query: 265 VPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLI 324
VP+RPVEDLAFAVARF Q+GG+F NYYMYHGGTNF RT+GGPFI+TSYDYDAP+DE+GL+
Sbjct: 276 VPHRPVEDLAFAVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPIDEFGLL 335
Query: 325 RQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVYKTGSGLCSAFLANIGTNSD 384
RQPKWGHL+DLH+AIK E LV+ DPT S+G +A V+K +G C+AFL+N N+
Sbjct: 336 RQPKWGHLRDLHRAIKQAEPVLVSADPTIESIGSYEKAYVFKAKNGACAAFLSNYHMNTA 395
Query: 385 VTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSFSRQSLQVAADSSDAIGSG 444
V V+FNG Y LPAWS+SILPDCK VFNTA + TL+P + +
Sbjct: 396 VKVRFNGQQYNLPAWSISILPDCKTAVFNTATVKEPTLMPKM-----------NPVVRFA 444
Query: 445 WSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLSTNIKADEPLLEDGSKTVLHV 504
W +E D AFTK GL+EQ++ T D+SDYLWY+ NI ++ L G L V
Sbjct: 445 WQSYSEDTNSLSDSAFTKDGLVEQLSMTWDKSDYLWYTTYVNIGTND--LRSGQSPQLTV 502
Query: 505 QSLGHALHAFINGKLVGE 522
S GH++ F+NGK G
Sbjct: 503 YSAGHSMQVFVNGKSYGS 520
|
Oryza sativa subsp. indica (taxid: 39946) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q9SCV3|BGAL9_ARATH Beta-galactosidase 9 OS=Arabidopsis thaliana GN=BGAL9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/533 (59%), Positives = 391/533 (73%), Gaps = 18/533 (3%)
Query: 7 LLLVLCWGFVVLATTSFGA-NVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKS 65
L++ L F +L+ + F NV+YDHRA++I GKRR+L+S IHYPR+TPEMW DLI KS
Sbjct: 17 LIIALLVYFPILSGSYFKPFNVSYDHRALIIAGKRRMLVSAGIHYPRATPEMWSDLIAKS 76
Query: 66 KDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNF 125
K+GG DV++TYVFWN HEPV+ QYNFEGRYDLVKFVKL+ +GLY HLRIGPYVCAEWNF
Sbjct: 77 KEGGADVVQTYVFWNGHEPVKGQYNFEGRYDLVKFVKLIGSSGLYLHLRIGPYVCAEWNF 136
Query: 126 GGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185
GGFP+WL IPGI+FRTDNEPFK EMQ+F KIVD+M++ KL+ QGGPII+ QIENEYG
Sbjct: 137 GGFPVWLRDIPGIEFRTDNEPFKKEMQKFVTKIVDLMREAKLFCWQGGPIIMLQIENEYG 196
Query: 186 NIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNN 245
+++ +YG GK Y+KWAA MAL L GVPWVMC+Q+DAP+ II+ CNG+YCD F PNS
Sbjct: 197 DVEKSYGQKGKDYVKWAASMALGLGAGVPWVMCKQTDAPENIIDACNGYYCDGFKPNSRT 256
Query: 246 KPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGG 305
KP +WTE+W GW+ +GG++P+RP EDLAFAVARF+QRGG+FQNYYMY GGTNF RTSGG
Sbjct: 257 KPVLWTEDWDGWYTKWGGSLPHRPAEDLAFAVARFYQRGGSFQNYYMYFGGTNFGRTSGG 316
Query: 306 PFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATD-PTYPSLGPNLEATV 364
PF TSYDYDAPLDEYGL +PKWGHLKDLH AIKLCE ALVA D P Y LG EA +
Sbjct: 317 PFYITSYDYDAPLDEYGLRSEPKWGHLKDLHAAIKLCEPALVAADAPQYRKLGSKQEAHI 376
Query: 365 Y----KTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSV 420
Y +TG +C+AFLANI + VKFNG SY LP WSVSILPDC++V FNTAK+ +
Sbjct: 377 YHGDGETGGKVCAAFLANIDEHKSAHVKFNGQSYTLPPWSVSILPDCRHVAFNTAKVGAQ 436
Query: 421 TLV-------PSFSRQSLQ---VAADSSDAIGSGWSYINEPVGISKDDAFTKPGLLEQIN 470
T V PS S+ V D+ I W + EP+GI ++ FT GLLE +N
Sbjct: 437 TSVKTVESARPSLGSMSILQKVVRQDNVSYISKSWMALKEPIGIWGENNFTFQGLLEHLN 496
Query: 471 TTADQSDYLWYSLSTNIKADEPLL--EDGSKTVLHVQSLGHALHAFINGKLVG 521
T D+SDYLW+ ++ D+ ++G + + + S+ L F+N +L G
Sbjct: 497 VTKDRSDYLWHKTRISVSEDDISFWKKNGPNSTVSIDSMRDVLRVFVNKQLAG 549
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 523 | ||||||
| 255578884 | 842 | beta-galactosidase, putative [Ricinus co | 0.988 | 0.614 | 0.865 | 0.0 | |
| 224106752 | 849 | predicted protein [Populus trichocarpa] | 0.967 | 0.595 | 0.856 | 0.0 | |
| 359478691 | 846 | PREDICTED: beta-galactosidase 8-like [Vi | 0.986 | 0.609 | 0.821 | 0.0 | |
| 56201401 | 851 | beta-galactosidase [Raphanus sativus] | 0.978 | 0.601 | 0.813 | 0.0 | |
| 356550171 | 840 | PREDICTED: beta-galactosidase 8-like iso | 0.977 | 0.608 | 0.814 | 0.0 | |
| 6686888 | 852 | putative beta-galactosidase [Arabidopsis | 0.950 | 0.583 | 0.826 | 0.0 | |
| 30683905 | 852 | beta-galactosidase 8 [Arabidopsis thalia | 0.950 | 0.583 | 0.826 | 0.0 | |
| 356539454 | 838 | PREDICTED: beta-galactosidase 8-like [Gl | 0.984 | 0.614 | 0.800 | 0.0 | |
| 334184536 | 846 | beta-galactosidase 8 [Arabidopsis thalia | 0.950 | 0.587 | 0.826 | 0.0 | |
| 297822423 | 846 | beta-glactosidase 8 [Arabidopsis lyrata | 0.977 | 0.604 | 0.804 | 0.0 |
| >gi|255578884|ref|XP_002530296.1| beta-galactosidase, putative [Ricinus communis] gi|223530194|gb|EEF32103.1| beta-galactosidase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 939 bits (2426), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/521 (86%), Positives = 477/521 (91%), Gaps = 4/521 (0%)
Query: 1 MASKEILLLVLCWGFVVLATTSFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPD 60
M KEIL++ VVLA TSF ANVTYDHRA++I GKRRVLISGSIHYPRSTPEMWP
Sbjct: 1 MGRKEILVVFFF--SVVLAETSFAANVTYDHRALLIDGKRRVLISGSIHYPRSTPEMWPG 58
Query: 61 LIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVC 120
LIQKSKDGGLDVIETYVFWN HEPVRNQYNFEGRYDLVKFVKLVAEAGLY H+RIGPYVC
Sbjct: 59 LIQKSKDGGLDVIETYVFWNGHEPVRNQYNFEGRYDLVKFVKLVAEAGLYVHIRIGPYVC 118
Query: 121 AEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQI 180
AEWN+GGFPLWLHFIPGI+FRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQI
Sbjct: 119 AEWNYGGFPLWLHFIPGIKFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQI 178
Query: 181 ENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFT 240
ENEYGNIDSA+G A K+YI WAAGMA+SLDTGVPWVMCQQ+DAPDP+INTCNGFYCDQFT
Sbjct: 179 ENEYGNIDSAFGPAAKTYINWAAGMAISLDTGVPWVMCQQADAPDPVINTCNGFYCDQFT 238
Query: 241 PNSNNKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFD 300
PNS NKPKMWTENWSGWF SFGGAVPYRPVEDLAFAVARF+Q GTFQNYYMYHGGTNF
Sbjct: 239 PNSKNKPKMWTENWSGWFQSFGGAVPYRPVEDLAFAVARFYQLSGTFQNYYMYHGGTNFG 298
Query: 301 RTSGGPFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNL 360
RT+GGPFISTSYDYDAPLDEYGL+RQPKWGHLKD+HKAIKLCE AL+ATDPT SLG NL
Sbjct: 299 RTTGGPFISTSYDYDAPLDEYGLLRQPKWGHLKDVHKAIKLCEEALIATDPTTTSLGSNL 358
Query: 361 EATVYKTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSV 420
EATVYKTGS LC+AFLANI T +D TV FNGNSY LPAWSVSILPDCKNV NTAKINSV
Sbjct: 359 EATVYKTGS-LCAAFLANIAT-TDKTVTFNGNSYNLPAWSVSILPDCKNVALNTAKINSV 416
Query: 421 TLVPSFSRQSLQVAADSSDAIGSGWSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLW 480
T+VPSF+RQSL DSS AIGSGWS+INEPVGISK+DAF K GLLEQINTTAD+SDYLW
Sbjct: 417 TIVPSFARQSLVGDVDSSKAIGSGWSWINEPVGISKNDAFVKSGLLEQINTTADKSDYLW 476
Query: 481 YSLSTNIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVG 521
YSLSTNIK DEP LEDGS+TVLHV+SLGHALHAFINGKL G
Sbjct: 477 YSLSTNIKGDEPFLEDGSQTVLHVESLGHALHAFINGKLAG 517
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224106752|ref|XP_002314274.1| predicted protein [Populus trichocarpa] gi|222850682|gb|EEE88229.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 922 bits (2383), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/507 (85%), Positives = 465/507 (91%), Gaps = 1/507 (0%)
Query: 15 FVVLATTSFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIE 74
+ LATTS+G NVTYDHRA++I GKRRVL+SGSIHYPRST EMW DLIQKSKDGGLDVIE
Sbjct: 20 LLTLATTSYGVNVTYDHRALLIDGKRRVLVSGSIHYPRSTVEMWADLIQKSKDGGLDVIE 79
Query: 75 TYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134
TYVFWN HEPV+NQYNFEGRYDLVKF+KLV EAGLYAHLRIGPYVCAEWN+GGFPLWLHF
Sbjct: 80 TYVFWNAHEPVQNQYNFEGRYDLVKFIKLVGEAGLYAHLRIGPYVCAEWNYGGFPLWLHF 139
Query: 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAA 194
+PGI+FRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDS+YG A
Sbjct: 140 VPGIKFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSSYGPA 199
Query: 195 GKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNNKPKMWTENW 254
KSYI WAA MA+SLDTGVPWVMCQQ+DAPDPIINTCNGFYCDQFTPNS NKPKMWTENW
Sbjct: 200 AKSYINWAASMAVSLDTGVPWVMCQQADAPDPIINTCNGFYCDQFTPNSKNKPKMWTENW 259
Query: 255 SGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDY 314
SGWFLSFGGAVPYRPVEDLAFAVARF+Q GGTFQNYYMYHGGTNF R++GGPFISTSYDY
Sbjct: 260 SGWFLSFGGAVPYRPVEDLAFAVARFYQLGGTFQNYYMYHGGTNFGRSTGGPFISTSYDY 319
Query: 315 DAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVYKTGSGLCSA 374
DAPLDEYGL RQPKWGHLKDLHK+IKLCE ALVATDP SLG NLEATVYKTG+GLCSA
Sbjct: 320 DAPLDEYGLTRQPKWGHLKDLHKSIKLCEEALVATDPVTSSLGQNLEATVYKTGTGLCSA 379
Query: 375 FLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSFSRQSLQVA 434
FLAN GT SD TV FNGNSY LP WSVSILPDCKNV NTAKINS+T++P+F QSL
Sbjct: 380 FLANFGT-SDKTVNFNGNSYNLPGWSVSILPDCKNVALNTAKINSMTVIPNFVHQSLIGD 438
Query: 435 ADSSDAIGSGWSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLSTNIKADEPLL 494
ADS+D +GS WS+I EPVGISK+DAF KPGLLEQINTTAD+SDYLWYSLST IK +EP L
Sbjct: 439 ADSADTLGSSWSWIYEPVGISKNDAFVKPGLLEQINTTADKSDYLWYSLSTVIKDNEPFL 498
Query: 495 EDGSKTVLHVQSLGHALHAFINGKLVG 521
EDGS+TVLHV+SLGHALHAF+NGKL G
Sbjct: 499 EDGSQTVLHVESLGHALHAFVNGKLAG 525
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359478691|ref|XP_002285084.2| PREDICTED: beta-galactosidase 8-like [Vitis vinifera] gi|297746241|emb|CBI16297.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/516 (82%), Positives = 464/516 (89%)
Query: 7 LLLVLCWGFVVLATTSFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSK 66
+ VL +ATTSF + VTYDHRA+VI GKRRVLISGSIHYPRSTP+MWPDLIQKSK
Sbjct: 6 FVFVLVSLLGAIATTSFASTVTYDHRALVIDGKRRVLISGSIHYPRSTPDMWPDLIQKSK 65
Query: 67 DGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFG 126
DGGLDVIETYVFWNLHEPVR QY+F+GR DLVKFVK VAEAGLY HLRIGPYVCAEWN+G
Sbjct: 66 DGGLDVIETYVFWNLHEPVRRQYDFKGRNDLVKFVKTVAEAGLYVHLRIGPYVCAEWNYG 125
Query: 127 GFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186
GFPLWLHFIPGIQFRTDN PFK EMQ FTAKIVDMMK+E LYASQGGPIILSQIENEYGN
Sbjct: 126 GFPLWLHFIPGIQFRTDNGPFKEEMQIFTAKIVDMMKKENLYASQGGPIILSQIENEYGN 185
Query: 187 IDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNNK 246
IDSAYG+A KSYI+WAA MA SLDTGVPWVMCQQ+DAPDP+INTCNGFYCDQFTPNS K
Sbjct: 186 IDSAYGSAAKSYIQWAASMATSLDTGVPWVMCQQADAPDPMINTCNGFYCDQFTPNSVKK 245
Query: 247 PKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGP 306
PKMWTENW+GWFLSFGGAVPYRPVED+AFAVARFFQ GGTFQNYYMYHGGTNF RT+GGP
Sbjct: 246 PKMWTENWTGWFLSFGGAVPYRPVEDIAFAVARFFQLGGTFQNYYMYHGGTNFGRTTGGP 305
Query: 307 FISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVYK 366
FI+TSYDYDAP+DEYGL+RQPKWGHLKDLHKAIKLCEAAL+ATDPT SLG NLEA+VYK
Sbjct: 306 FIATSYDYDAPIDEYGLLRQPKWGHLKDLHKAIKLCEAALIATDPTITSLGTNLEASVYK 365
Query: 367 TGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSF 426
TG+G C+AFLAN+ TNSD TV F+GNSY LPAWSVSILPDCKNV NTA+INS+ ++P F
Sbjct: 366 TGTGSCAAFLANVRTNSDATVNFSGNSYHLPAWSVSILPDCKNVALNTAQINSMAVMPRF 425
Query: 427 SRQSLQVAADSSDAIGSGWSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLSTN 486
+QSL+ DSSD SGWS+++EPVGISK++AFTK GLLEQIN TAD+SDYLWYSLST
Sbjct: 426 MQQSLKNDIDSSDGFQSGWSWVDEPVGISKNNAFTKLGLLEQINITADKSDYLWYSLSTE 485
Query: 487 IKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVGE 522
I+ DEP LEDGS+TVLHV+SLGHALHAFINGKL G
Sbjct: 486 IQGDEPFLEDGSQTVLHVESLGHALHAFINGKLAGS 521
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|56201401|dbj|BAD20774.2| beta-galactosidase [Raphanus sativus] | Back alignment and taxonomy information |
|---|
Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/516 (81%), Positives = 457/516 (88%), Gaps = 4/516 (0%)
Query: 6 ILLLVLCWGFVVLATTSFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKS 65
+ LLVL V++ + A+VTYDHRA+VI GKR++LISGSIHYPRSTPEMWPDLIQKS
Sbjct: 16 VSLLVL----VMMTAAATAASVTYDHRALVIDGKRKILISGSIHYPRSTPEMWPDLIQKS 71
Query: 66 KDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNF 125
KDGGLDVIETYVFWN HEP +N+YNFEGRYDLVKFVKL A+AGLY HLRIGPY CAEWN+
Sbjct: 72 KDGGLDVIETYVFWNGHEPEKNKYNFEGRYDLVKFVKLAAKAGLYVHLRIGPYACAEWNY 131
Query: 126 GGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185
GGFP+WLHF+PGI+FRTDNEPFKAEMQRFTAKIVD+MKQEKLYASQGGPIILSQIENEYG
Sbjct: 132 GGFPVWLHFVPGIKFRTDNEPFKAEMQRFTAKIVDLMKQEKLYASQGGPIILSQIENEYG 191
Query: 186 NIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNN 245
NIDS+YGAAGKSY+KW+A MALSLDTGVPW MCQQ DAPDPIINTCNGFYCDQFTPNSNN
Sbjct: 192 NIDSSYGAAGKSYMKWSASMALSLDTGVPWNMCQQGDAPDPIINTCNGFYCDQFTPNSNN 251
Query: 246 KPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGG 305
KPKMWTENWSGWFL FG PYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNF+RTSGG
Sbjct: 252 KPKMWTENWSGWFLGFGEPSPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFERTSGG 311
Query: 306 PFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVY 365
P ISTSYDYDAP+DEYGL+RQPKWGHL+DLHKAIKLCE AL+ATDP SLG NLEA VY
Sbjct: 312 PLISTSYDYDAPIDEYGLLRQPKWGHLRDLHKAIKLCEDALIATDPKITSLGSNLEAAVY 371
Query: 366 KTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPS 425
KT +G C+AFLANIGT SD TV FNG SY LPAWSVSILPDCKNV FNTAKINS T +
Sbjct: 372 KTSTGSCAAFLANIGTKSDATVTFNGKSYRLPAWSVSILPDCKNVAFNTAKINSATESTA 431
Query: 426 FSRQSLQVAADSSDAIGSGWSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLST 485
F+RQSL+ ADSS +GS WSYI EPVGISK DAF KPGLLEQINTTAD+SDYLWYSL
Sbjct: 432 FARQSLKPNADSSAELGSQWSYIKEPVGISKADAFVKPGLLEQINTTADKSDYLWYSLRM 491
Query: 486 NIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVG 521
+IK DE L++GSK VLHVQS+G ++AFINGKL G
Sbjct: 492 DIKGDETFLDEGSKAVLHVQSIGQLVYAFINGKLAG 527
|
Source: Raphanus sativus Species: Raphanus sativus Genus: Raphanus Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356550171|ref|XP_003543462.1| PREDICTED: beta-galactosidase 8-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/517 (81%), Positives = 463/517 (89%), Gaps = 6/517 (1%)
Query: 7 LLLVLCWGFVVLATTSFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSK 66
++LVL W + + T F ANV YDHRA+VI GKRRVLISGSIHYPRSTPEMWPDLIQKSK
Sbjct: 6 IVLVLFWLLCIHSPTLFCANVEYDHRALVIDGKRRVLISGSIHYPRSTPEMWPDLIQKSK 65
Query: 67 DGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFG 126
DGGLDVIETYVFWNL+EPVR QY+F+GR DLVKFVK VA AGLY HLRIGPYVCAEWN+G
Sbjct: 66 DGGLDVIETYVFWNLNEPVRGQYDFDGRKDLVKFVKTVAAAGLYVHLRIGPYVCAEWNYG 125
Query: 127 GFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186
GFPLWLHFIPGI+FRTDNEPFKAEM+RFTAKIVDM+K+E LYASQGGP+ILSQIENEYGN
Sbjct: 126 GFPLWLHFIPGIKFRTDNEPFKAEMKRFTAKIVDMIKEENLYASQGGPVILSQIENEYGN 185
Query: 187 IDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNNK 246
IDSAYGAAGKSYIKWAA MA SLDTGVPWVMCQQ+DAPDPIINTCNGFYCDQFTPNSN K
Sbjct: 186 IDSAYGAAGKSYIKWAATMATSLDTGVPWVMCQQADAPDPIINTCNGFYCDQFTPNSNTK 245
Query: 247 PKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGP 306
PKMWTENWSGWFL FGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGP
Sbjct: 246 PKMWTENWSGWFLPFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGP 305
Query: 307 FISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVYK 366
FI+TSYDYDAP+DEYG+IRQPKWGHLK++HKAIKLCE AL+ATDPT SLGPNLEA VYK
Sbjct: 306 FIATSYDYDAPIDEYGIIRQPKWGHLKEVHKAIKLCEEALIATDPTITSLGPNLEAAVYK 365
Query: 367 TGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSF 426
TGS +C+AFLAN+ T SDVTV F+GNSY LPAWSVSILPDCKNVV NTAKINS + + SF
Sbjct: 366 TGS-VCAAFLANVDTKSDVTVNFSGNSYHLPAWSVSILPDCKNVVLNTAKINSASAISSF 424
Query: 427 SRQSLQVAADSSDAIGSGWSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLSTN 486
+ +SL+ SS+A +GWS+I+EPVGISK D+F + GLLEQINTTAD+SDYLWYSLS +
Sbjct: 425 TTESLKEDIGSSEASSTGWSWISEPVGISKADSFPQTGLLEQINTTADKSDYLWYSLSID 484
Query: 487 IKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVGEE 523
K D GS+TVLH++SLGHALHAFINGKL G +
Sbjct: 485 YKGDA-----GSQTVLHIESLGHALHAFINGKLAGSQ 516
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|6686888|emb|CAB64744.1| putative beta-galactosidase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/497 (82%), Positives = 446/497 (89%)
Query: 25 ANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEP 84
ANVTYDHRA+VI GKR+VLISGSIHYPRSTPEMWP+LIQKSKDGGLDVIETYVFW+ HEP
Sbjct: 30 ANVTYDHRALVIDGKRKVLISGSIHYPRSTPEMWPELIQKSKDGGLDVIETYVFWSGHEP 89
Query: 85 VRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDN 144
+N+YNFEGRYDLVKFVKL A+AGLY HLRIGPYVCAEWN+GGFP+WLHF+PGI+FRTDN
Sbjct: 90 EKNKYNFEGRYDLVKFVKLAAKAGLYVHLRIGPYVCAEWNYGGFPVWLHFVPGIKFRTDN 149
Query: 145 EPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAG 204
EPFK EMQRFT KIVD+MKQEKLYASQGGPIILSQIENEYGNIDSAYGAA KSYIKW+A
Sbjct: 150 EPFKEEMQRFTTKIVDLMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAAKSYIKWSAS 209
Query: 205 MALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNNKPKMWTENWSGWFLSFGGA 264
MALSLDTGVPW MCQQ+DAPDP+INTCNGFYCDQFTPNSNNKPKMWTENWSGWFL FG
Sbjct: 210 MALSLDTGVPWNMCQQTDAPDPMINTCNGFYCDQFTPNSNNKPKMWTENWSGWFLGFGDP 269
Query: 265 VPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLI 324
PYRPVEDLAFAVARF+QRGGTFQNYYMYHGGTNFDRTSGGP ISTSYDYDAP+DEYGL+
Sbjct: 270 SPYRPVEDLAFAVARFYQRGGTFQNYYMYHGGTNFDRTSGGPLISTSYDYDAPIDEYGLL 329
Query: 325 RQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVYKTGSGLCSAFLANIGTNSD 384
RQPKWGHL+DLHKAIKLCE AL+ATDPT SLG NLEA VYKT SG C+AFLAN+ T SD
Sbjct: 330 RQPKWGHLRDLHKAIKLCEDALIATDPTITSLGSNLEAAVYKTESGSCAAFLANVDTKSD 389
Query: 385 VTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSFSRQSLQVAADSSDAIGSG 444
TV FNG SY LPAWSVSILPDCKNV FNTAKINS T +F+RQSL+ SS +GS
Sbjct: 390 ATVTFNGKSYNLPAWSVSILPDCKNVAFNTAKINSATESTAFARQSLKPDGGSSAELGSQ 449
Query: 445 WSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLSTNIKADEPLLEDGSKTVLHV 504
WSYI EP+GISK DAF KPGLLEQINTTAD+SDYLWYSL T+IK DE L++GSK VLH+
Sbjct: 450 WSYIKEPIGISKADAFLKPGLLEQINTTADKSDYLWYSLRTDIKGDETFLDEGSKAVLHI 509
Query: 505 QSLGHALHAFINGKLVG 521
+SLG ++AFINGKL G
Sbjct: 510 ESLGQVVYAFINGKLAG 526
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30683905|ref|NP_850121.1| beta-galactosidase 8 [Arabidopsis thaliana] gi|152013364|sp|Q9SCV4.2|BGAL8_ARATH RecName: Full=Beta-galactosidase 8; Short=Lactase 8; AltName: Full=Protein AR782; Flags: Precursor gi|330253033|gb|AEC08127.1| beta-galactosidase 8 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/497 (82%), Positives = 446/497 (89%)
Query: 25 ANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEP 84
ANVTYDHRA+VI GKR+VLISGSIHYPRSTPEMWP+LIQKSKDGGLDVIETYVFW+ HEP
Sbjct: 30 ANVTYDHRALVIDGKRKVLISGSIHYPRSTPEMWPELIQKSKDGGLDVIETYVFWSGHEP 89
Query: 85 VRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDN 144
+N+YNFEGRYDLVKFVKL A+AGLY HLRIGPYVCAEWN+GGFP+WLHF+PGI+FRTDN
Sbjct: 90 EKNKYNFEGRYDLVKFVKLAAKAGLYVHLRIGPYVCAEWNYGGFPVWLHFVPGIKFRTDN 149
Query: 145 EPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAG 204
EPFK EMQRFT KIVD+MKQEKLYASQGGPIILSQIENEYGNIDSAYGAA KSYIKW+A
Sbjct: 150 EPFKEEMQRFTTKIVDLMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAAKSYIKWSAS 209
Query: 205 MALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNNKPKMWTENWSGWFLSFGGA 264
MALSLDTGVPW MCQQ+DAPDP+INTCNGFYCDQFTPNSNNKPKMWTENWSGWFL FG
Sbjct: 210 MALSLDTGVPWNMCQQTDAPDPMINTCNGFYCDQFTPNSNNKPKMWTENWSGWFLGFGDP 269
Query: 265 VPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLI 324
PYRPVEDLAFAVARF+QRGGTFQNYYMYHGGTNFDRTSGGP ISTSYDYDAP+DEYGL+
Sbjct: 270 SPYRPVEDLAFAVARFYQRGGTFQNYYMYHGGTNFDRTSGGPLISTSYDYDAPIDEYGLL 329
Query: 325 RQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVYKTGSGLCSAFLANIGTNSD 384
RQPKWGHL+DLHKAIKLCE AL+ATDPT SLG NLEA VYKT SG C+AFLAN+ T SD
Sbjct: 330 RQPKWGHLRDLHKAIKLCEDALIATDPTITSLGSNLEAAVYKTESGSCAAFLANVDTKSD 389
Query: 385 VTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSFSRQSLQVAADSSDAIGSG 444
TV FNG SY LPAWSVSILPDCKNV FNTAKINS T +F+RQSL+ SS +GS
Sbjct: 390 ATVTFNGKSYNLPAWSVSILPDCKNVAFNTAKINSATESTAFARQSLKPDGGSSAELGSQ 449
Query: 445 WSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLSTNIKADEPLLEDGSKTVLHV 504
WSYI EP+GISK DAF KPGLLEQINTTAD+SDYLWYSL T+IK DE L++GSK VLH+
Sbjct: 450 WSYIKEPIGISKADAFLKPGLLEQINTTADKSDYLWYSLRTDIKGDETFLDEGSKAVLHI 509
Query: 505 QSLGHALHAFINGKLVG 521
+SLG ++AFINGKL G
Sbjct: 510 ESLGQVVYAFINGKLAG 526
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356539454|ref|XP_003538213.1| PREDICTED: beta-galactosidase 8-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/522 (80%), Positives = 461/522 (88%), Gaps = 7/522 (1%)
Query: 1 MASKEILLLVLCWGFVVLATTSFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPD 60
M +IL + L W F V A +SF ANVTYDHRA+VI GKRRVL+SGSIHYPRSTPEMWPD
Sbjct: 1 MRGTQILFVGLLWFFCVYAPSSFCANVTYDHRALVIDGKRRVLVSGSIHYPRSTPEMWPD 60
Query: 61 LIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVC 120
LIQKSKDGGLDVIETYVFWNLHEPV+ QYNFEGR DLVKFVK VA AGLY HLRIGPY C
Sbjct: 61 LIQKSKDGGLDVIETYVFWNLHEPVQGQYNFEGRADLVKFVKAVAAAGLYVHLRIGPYAC 120
Query: 121 AEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQI 180
AEWN+GGFPLWLHFIPGIQFRTDN+PF+AEM+RFT KIVDMMKQE LYASQGGPIILSQ+
Sbjct: 121 AEWNYGGFPLWLHFIPGIQFRTDNKPFEAEMKRFTVKIVDMMKQESLYASQGGPIILSQV 180
Query: 181 ENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFT 240
ENEYGNID+AYG A KSYIKWAA MA SLDTGVPWVMCQQ+DAPDPIINTCNGFYCDQFT
Sbjct: 181 ENEYGNIDAAYGPAAKSYIKWAASMATSLDTGVPWVMCQQADAPDPIINTCNGFYCDQFT 240
Query: 241 PNSNNKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFD 300
PNSN KPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARF+QRGGTFQNYYMYHGGTNF
Sbjct: 241 PNSNAKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFYQRGGTFQNYYMYHGGTNFG 300
Query: 301 RTSGGPFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNL 360
RT+GGPFISTSYDYDAP+D+YG+IRQPKWGHLKD+HKAIKLCE AL+ATDPT S GPN+
Sbjct: 301 RTTGGPFISTSYDYDAPIDQYGIIRQPKWGHLKDVHKAIKLCEEALIATDPTITSPGPNI 360
Query: 361 EATVYKTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSV 420
EA VYKTGS +C+AFLANI T SD TV FNGNSY LPAWSVSILPDCKNVV NTAKINS
Sbjct: 361 EAAVYKTGS-ICAAFLANIAT-SDATVTFNGNSYHLPAWSVSILPDCKNVVLNTAKINSA 418
Query: 421 TLVPSFSRQSLQVAADSSDAIGSGWSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLW 480
+++ SF+ +S + S D GSGWS+I+EP+GISK D+F+K GLLEQINTTAD+SDYLW
Sbjct: 419 SMISSFTTESFKEEVGSLDDSGSGWSWISEPIGISKSDSFSKFGLLEQINTTADKSDYLW 478
Query: 481 YSLSTNIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVGE 522
YS+S +++ D GS+TVLH++SLGHALHAFINGK+ G
Sbjct: 479 YSISIDVEGDS-----GSQTVLHIESLGHALHAFINGKIAGS 515
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334184536|ref|NP_001189624.1| beta-galactosidase 8 [Arabidopsis thaliana] gi|330253034|gb|AEC08128.1| beta-galactosidase 8 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/497 (82%), Positives = 446/497 (89%)
Query: 25 ANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEP 84
ANVTYDHRA+VI GKR+VLISGSIHYPRSTPEMWP+LIQKSKDGGLDVIETYVFW+ HEP
Sbjct: 24 ANVTYDHRALVIDGKRKVLISGSIHYPRSTPEMWPELIQKSKDGGLDVIETYVFWSGHEP 83
Query: 85 VRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDN 144
+N+YNFEGRYDLVKFVKL A+AGLY HLRIGPYVCAEWN+GGFP+WLHF+PGI+FRTDN
Sbjct: 84 EKNKYNFEGRYDLVKFVKLAAKAGLYVHLRIGPYVCAEWNYGGFPVWLHFVPGIKFRTDN 143
Query: 145 EPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAG 204
EPFK EMQRFT KIVD+MKQEKLYASQGGPIILSQIENEYGNIDSAYGAA KSYIKW+A
Sbjct: 144 EPFKEEMQRFTTKIVDLMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAAKSYIKWSAS 203
Query: 205 MALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNNKPKMWTENWSGWFLSFGGA 264
MALSLDTGVPW MCQQ+DAPDP+INTCNGFYCDQFTPNSNNKPKMWTENWSGWFL FG
Sbjct: 204 MALSLDTGVPWNMCQQTDAPDPMINTCNGFYCDQFTPNSNNKPKMWTENWSGWFLGFGDP 263
Query: 265 VPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLI 324
PYRPVEDLAFAVARF+QRGGTFQNYYMYHGGTNFDRTSGGP ISTSYDYDAP+DEYGL+
Sbjct: 264 SPYRPVEDLAFAVARFYQRGGTFQNYYMYHGGTNFDRTSGGPLISTSYDYDAPIDEYGLL 323
Query: 325 RQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVYKTGSGLCSAFLANIGTNSD 384
RQPKWGHL+DLHKAIKLCE AL+ATDPT SLG NLEA VYKT SG C+AFLAN+ T SD
Sbjct: 324 RQPKWGHLRDLHKAIKLCEDALIATDPTITSLGSNLEAAVYKTESGSCAAFLANVDTKSD 383
Query: 385 VTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSFSRQSLQVAADSSDAIGSG 444
TV FNG SY LPAWSVSILPDCKNV FNTAKINS T +F+RQSL+ SS +GS
Sbjct: 384 ATVTFNGKSYNLPAWSVSILPDCKNVAFNTAKINSATESTAFARQSLKPDGGSSAELGSQ 443
Query: 445 WSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLSTNIKADEPLLEDGSKTVLHV 504
WSYI EP+GISK DAF KPGLLEQINTTAD+SDYLWYSL T+IK DE L++GSK VLH+
Sbjct: 444 WSYIKEPIGISKADAFLKPGLLEQINTTADKSDYLWYSLRTDIKGDETFLDEGSKAVLHI 503
Query: 505 QSLGHALHAFINGKLVG 521
+SLG ++AFINGKL G
Sbjct: 504 ESLGQVVYAFINGKLAG 520
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297822423|ref|XP_002879094.1| beta-glactosidase 8 [Arabidopsis lyrata subsp. lyrata] gi|297324933|gb|EFH55353.1| beta-glactosidase 8 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/516 (80%), Positives = 456/516 (88%), Gaps = 5/516 (0%)
Query: 6 ILLLVLCWGFVVLATTSFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKS 65
ILLL+L +++A T+ NVTYDHRA+VI GKR+VLISGSIHYPRSTPEMWP+LI+KS
Sbjct: 10 ILLLIL---QIMMAATA--VNVTYDHRALVIDGKRKVLISGSIHYPRSTPEMWPELIKKS 64
Query: 66 KDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNF 125
KDGGLDVIETYVFW+ HEP +N+YNFEGRYDLVKFVKLV EAGLY HLRIGPYVCAEWN+
Sbjct: 65 KDGGLDVIETYVFWSGHEPEKNKYNFEGRYDLVKFVKLVEEAGLYVHLRIGPYVCAEWNY 124
Query: 126 GGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185
GGFP+WLHF+PGI+FRTDNEPFK EMQRFT KIVD+MKQEKLYASQGGPIILSQIENEYG
Sbjct: 125 GGFPVWLHFVPGIKFRTDNEPFKEEMQRFTTKIVDLMKQEKLYASQGGPIILSQIENEYG 184
Query: 186 NIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNN 245
NIDSAYGAA K YIKW+A MALSLDTGVPW MCQQ+DAPDP+INTCNGFYCDQFTPNSN+
Sbjct: 185 NIDSAYGAAAKIYIKWSASMALSLDTGVPWNMCQQADAPDPMINTCNGFYCDQFTPNSNS 244
Query: 246 KPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGG 305
KPKMWTENWSGWFL FG PYRPVEDLAFAVARF+QRGGTFQNYYMYHGGTNFDRTSGG
Sbjct: 245 KPKMWTENWSGWFLGFGDPSPYRPVEDLAFAVARFYQRGGTFQNYYMYHGGTNFDRTSGG 304
Query: 306 PFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVY 365
P ISTSYDYDAP+DEYGL+RQPKWGHL+DLHKAIKLCE AL+ATDPT SLG NLEA VY
Sbjct: 305 PLISTSYDYDAPIDEYGLLRQPKWGHLRDLHKAIKLCEDALIATDPTISSLGSNLEAAVY 364
Query: 366 KTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPS 425
KT SG C+AFLAN+GT SD TV FNG SY LPAWSVSILPDCKNV FNTAKINS T +
Sbjct: 365 KTASGSCAAFLANVGTKSDATVSFNGESYHLPAWSVSILPDCKNVAFNTAKINSATEPTA 424
Query: 426 FSRQSLQVAADSSDAIGSGWSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLST 485
F+RQSL+ SS +GS WSYI EP+GISK DAF KPGLLEQINTTAD+SDYLWYSL
Sbjct: 425 FARQSLKPDGGSSAELGSEWSYIKEPIGISKADAFLKPGLLEQINTTADKSDYLWYSLRM 484
Query: 486 NIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVG 521
+IK DE L++GSK VLH++SLG ++AFINGKL G
Sbjct: 485 DIKGDETFLDEGSKAVLHIESLGQVVYAFINGKLAG 520
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 523 | ||||||
| TAIR|locus:2056623 | 852 | BGAL8 "beta-galactosidase 8" [ | 0.977 | 0.599 | 0.812 | 5.4e-237 | |
| TAIR|locus:2091496 | 847 | BGAL1 "beta galactosidase 1" [ | 0.967 | 0.597 | 0.647 | 5.8e-185 | |
| TAIR|locus:2115310 | 856 | BGAL3 "beta-galactosidase 3" [ | 0.967 | 0.591 | 0.612 | 2.1e-178 | |
| TAIR|locus:2120830 | 728 | BGAL12 "beta-galactosidase 12" | 0.959 | 0.689 | 0.626 | 5.1e-177 | |
| TAIR|locus:2046452 | 887 | BGAL9 "beta galactosidase 9" [ | 0.927 | 0.546 | 0.622 | 1.2e-175 | |
| TAIR|locus:2085131 | 727 | BGAL2 "beta-galactosidase 2" [ | 0.959 | 0.690 | 0.620 | 1.6e-175 | |
| TAIR|locus:2028265 | 732 | BGAL5 "beta-galactosidase 5" [ | 0.927 | 0.662 | 0.626 | 2.4e-172 | |
| TAIR|locus:2170282 | 724 | BGAL4 "beta-galactosidase 4" [ | 0.957 | 0.691 | 0.607 | 1.2e-170 | |
| TAIR|locus:2163951 | 741 | BGAL10 "beta-galactosidase 10" | 0.978 | 0.690 | 0.554 | 6.3e-163 | |
| TAIR|locus:2180439 | 826 | BGAL7 "beta-galactosidase 7" [ | 0.948 | 0.600 | 0.557 | 2e-159 |
| TAIR|locus:2056623 BGAL8 "beta-galactosidase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2285 (809.4 bits), Expect = 5.4e-237, P = 5.4e-237
Identities = 419/516 (81%), Positives = 458/516 (88%)
Query: 6 ILLLVLCWGFVVLATTSFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKS 65
ILLL+L +V+A T+ ANVTYDHRA+VI GKR+VLISGSIHYPRSTPEMWP+LIQKS
Sbjct: 16 ILLLILV---IVVAATA--ANVTYDHRALVIDGKRKVLISGSIHYPRSTPEMWPELIQKS 70
Query: 66 KDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNF 125
KDGGLDVIETYVFW+ HEP +N+YNFEGRYDLVKFVKL A+AGLY HLRIGPYVCAEWN+
Sbjct: 71 KDGGLDVIETYVFWSGHEPEKNKYNFEGRYDLVKFVKLAAKAGLYVHLRIGPYVCAEWNY 130
Query: 126 GGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185
GGFP+WLHF+PGI+FRTDNEPFK EMQRFT KIVD+MKQEKLYASQGGPIILSQIENEYG
Sbjct: 131 GGFPVWLHFVPGIKFRTDNEPFKEEMQRFTTKIVDLMKQEKLYASQGGPIILSQIENEYG 190
Query: 186 NIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNN 245
NIDSAYGAA KSYIKW+A MALSLDTGVPW MCQQ+DAPDP+INTCNGFYCDQFTPNSNN
Sbjct: 191 NIDSAYGAAAKSYIKWSASMALSLDTGVPWNMCQQTDAPDPMINTCNGFYCDQFTPNSNN 250
Query: 246 KPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGG 305
KPKMWTENWSGWFL FG PYRPVEDLAFAVARF+QRGGTFQNYYMYHGGTNFDRTSGG
Sbjct: 251 KPKMWTENWSGWFLGFGDPSPYRPVEDLAFAVARFYQRGGTFQNYYMYHGGTNFDRTSGG 310
Query: 306 PFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVY 365
P ISTSYDYDAP+DEYGL+RQPKWGHL+DLHKAIKLCE AL+ATDPT SLG NLEA VY
Sbjct: 311 PLISTSYDYDAPIDEYGLLRQPKWGHLRDLHKAIKLCEDALIATDPTITSLGSNLEAAVY 370
Query: 366 KTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPS 425
KT SG C+AFLAN+ T SD TV FNG SY LPAWSVSILPDCKNV FNTAKINS T +
Sbjct: 371 KTESGSCAAFLANVDTKSDATVTFNGKSYNLPAWSVSILPDCKNVAFNTAKINSATESTA 430
Query: 426 FSRQSLQVAADSSDAIGSGWSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLST 485
F+RQSL+ SS +GS WSYI EP+GISK DAF KPGLLEQINTTAD+SDYLWYSL T
Sbjct: 431 FARQSLKPDGGSSAELGSQWSYIKEPIGISKADAFLKPGLLEQINTTADKSDYLWYSLRT 490
Query: 486 NIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVG 521
+IK DE L++GSK VLH++SLG ++AFINGKL G
Sbjct: 491 DIKGDETFLDEGSKAVLHIESLGQVVYAFINGKLAG 526
|
|
| TAIR|locus:2091496 BGAL1 "beta galactosidase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1794 (636.6 bits), Expect = 5.8e-185, P = 5.8e-185
Identities = 338/522 (64%), Positives = 390/522 (74%)
Query: 1 MASKEILLLVLCWGFVVLATTSFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPD 60
MA+ L L+ GF+V S +V+YD RA+ I GKRR+LISGSIHYPRSTPEMWPD
Sbjct: 14 MAAVSALFLL---GFLVC---SVSGSVSYDSRAITINGKRRILISGSIHYPRSTPEMWPD 67
Query: 61 LIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVC 120
LI+K+K+GGLDVI+TYVFWN HEP +Y FEG YDLVKFVKLV ++GLY HLRIGPYVC
Sbjct: 68 LIRKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFVKLVQQSGLYLHLRIGPYVC 127
Query: 121 AEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQI 180
AEWNFGGFP+WL +IPGI FRTDN PFKA+MQRFT KIV+MMK E+L+ SQGGPIILSQI
Sbjct: 128 AEWNFGGFPVWLKYIPGISFRTDNGPFKAQMQRFTTKIVNMMKAERLFESQGGPIILSQI 187
Query: 181 ENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFT 240
ENEYG ++ GA G+SY WAA MA+ L TGVPWVMC+Q DAPDPIIN CNGFYCD F+
Sbjct: 188 ENEYGPMEYELGAPGRSYTNWAAKMAVGLGTGVPWVMCKQDDAPDPIINACNGFYCDYFS 247
Query: 241 PNSNNKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFD 300
PN KPKMWTE W+GWF FGG VPYRP ED+AF+VARF Q+GG+F NYYMYHGGTNF
Sbjct: 248 PNKAYKPKMWTEAWTGWFTKFGGPVPYRPAEDMAFSVARFIQKGGSFINYYMYHGGTNFG 307
Query: 301 RTSGGPFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNL 360
RT+GGPFI+TSYDYDAPLDEYGL RQPKWGHLKDLH+AIKLCE ALV+ +PT LG
Sbjct: 308 RTAGGPFIATSYDYDAPLDEYGLERQPKWGHLKDLHRAIKLCEPALVSGEPTRMPLGNYQ 367
Query: 361 EATVYKTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSV 420
EA VYK+ SG CSAFLAN S V F N Y LP WS+SILPDCKN V+NTA++ +
Sbjct: 368 EAHVYKSKSGACSAFLANYNPKSYAKVSFGNNHYNLPPWSISILPDCKNTVYNTARVGAQ 427
Query: 421 TLVPSFSRQSL-QVAADSSDAIGSGWSYINEPVGISKDDAFTKPGLLEQINTTADQSDYL 479
T SR + +V G W NE D++FT GL+EQINTT D SDYL
Sbjct: 428 T-----SRMKMVRVPVHG----GLSWQAYNEDPSTYIDESFTMVGLVEQINTTRDTSDYL 478
Query: 480 WYSLSTNIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVG 521
WY + A+E L +G L V S GHA+H FING+L G
Sbjct: 479 WYMTDVKVDANEGFLRNGDLPTLTVLSAGHAMHVFINGQLSG 520
|
|
| TAIR|locus:2115310 BGAL3 "beta-galactosidase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1732 (614.8 bits), Expect = 2.1e-178, P = 2.1e-178
Identities = 316/516 (61%), Positives = 379/516 (73%)
Query: 7 LLLVLCWGFVVLATTSFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSK 66
L+L C GF++L VTYD +A++I G+RR+L SGSIHYPRSTP+MW DLIQK+K
Sbjct: 13 LILWFCLGFLILGVGFVQCGVTYDRKALLINGQRRILFSGSIHYPRSTPDMWEDLIQKAK 72
Query: 67 DGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFG 126
DGG+DVIETYVFWNLHEP +Y+FEGR DLV+FVK + +AGLYAHLRIGPYVCAEWNFG
Sbjct: 73 DGGIDVIETYVFWNLHEPSPGKYDFEGRNDLVRFVKTIHKAGLYAHLRIGPYVCAEWNFG 132
Query: 127 GFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186
GFP+WL ++PGI FRTDNEPFK M+ FT +IV++MK E L+ SQGGPIILSQIENEYG
Sbjct: 133 GFPVWLKYVPGISFRTDNEPFKRAMKGFTERIVELMKSENLFESQGGPIILSQIENEYGR 192
Query: 187 IDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNNK 246
GA G +Y+ WAA MA++ +TGVPWVMC++ DAPDP+INTCNGFYCD F PN K
Sbjct: 193 QGQLLGAEGHNYMTWAAKMAIATETGVPWVMCKEDDAPDPVINTCNGFYCDSFAPNKPYK 252
Query: 247 PKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGP 306
P +WTE WSGWF FGG + +RPV+DLAF VARF Q+GG+F NYYMYHGGTNF RT+GGP
Sbjct: 253 PLIWTEAWSGWFTEFGGPMHHRPVQDLAFGVARFIQKGGSFVNYYMYHGGTNFGRTAGGP 312
Query: 307 FISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVYK 366
F++TSYDYDAP+DEYGLIRQPK+GHLK+LH+AIK+CE ALV+ DP S+G +A VY
Sbjct: 313 FVTTSYDYDAPIDEYGLIRQPKYGHLKELHRAIKMCEKALVSADPVVTSIGNKQQAHVYS 372
Query: 367 TGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSF 426
SG CSAFLAN T S V FN Y LP WS+SILPDC+N VFNTAK+
Sbjct: 373 AESGDCSAFLANYDTESAARVLFNNVHYNLPPWSISILPDCRNAVFNTAKVGV------- 425
Query: 427 SRQSLQVAADSSDAIGSGW-SYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLST 485
Q+ Q+ +D W SY+ + + FT GLLEQIN T D SDYLWY S
Sbjct: 426 --QTSQMEMLPTDTKNFQWESYLEDLSSLDDSSTFTTHGLLEQINVTRDTSDYLWYMTSV 483
Query: 486 NIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVG 521
+I E L G L +QS GHA+H F+NG+L G
Sbjct: 484 DIGDSESFLHGGELPTLIIQSTGHAVHIFVNGQLSG 519
|
|
| TAIR|locus:2120830 BGAL12 "beta-galactosidase 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1719 (610.2 bits), Expect = 5.1e-177, P = 5.1e-177
Identities = 324/517 (62%), Positives = 387/517 (74%)
Query: 6 ILLLVLCWGFVVLATTSFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKS 65
ILL +LC ++ S A VTYD +AV+I G+RR+L+SGSIHYPRSTPEMWPDLIQK+
Sbjct: 11 ILLGILCCSSLIC---SVKAIVTYDRKAVIINGQRRILLSGSIHYPRSTPEMWPDLIQKA 67
Query: 66 KDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNF 125
KDGGLDVI+TYVFWN HEP QY FE RYDLVKF+K+V +AGLY HLRIGPYVCAEWNF
Sbjct: 68 KDGGLDVIQTYVFWNGHEPSPGQYYFEDRYDLVKFIKVVQQAGLYVHLRIGPYVCAEWNF 127
Query: 126 GGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185
GGFP+WL ++PG+ FRTDNEPFKA MQ+FT KIV MMK+EKL+ +QGGPIILSQIENEYG
Sbjct: 128 GGFPVWLKYVPGMVFRTDNEPFKAAMQKFTEKIVRMMKEEKLFETQGGPIILSQIENEYG 187
Query: 186 NIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNN 245
I+ GA GK+Y KW A MA L TGVPW+MC+Q DAP+ IINTCNGFYC+ F PNS+N
Sbjct: 188 PIEWEIGAPGKAYTKWVAEMAQGLSTGVPWIMCKQDDAPNSIINTCNGFYCENFKPNSDN 247
Query: 246 KPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGG 305
KPKMWTENW+GWF FGGAVPYRP ED+A +VARF Q GG+F NYYMYHGGTNFDRT+G
Sbjct: 248 KPKMWTENWTGWFTEFGGAVPYRPAEDIALSVARFIQNGGSFINYYMYHGGTNFDRTAG- 306
Query: 306 PFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVY 365
FI+TSYDYDAPLDEYGL R+PK+ HLK LHK IKLCE ALV+ DPT SLG EA V+
Sbjct: 307 EFIATSYDYDAPLDEYGLPREPKYSHLKRLHKVIKLCEPALVSADPTVTSLGDKQEAHVF 366
Query: 366 KTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPS 425
K+ S C+AFL+N T+S V F G++Y LP WSVSILPDCK +NTAK+ T
Sbjct: 367 KSKSS-CAAFLSNYNTSSAARVLFGGSTYDLPPWSVSILPDCKTEYYNTAKVQVRT---- 421
Query: 426 FSRQSLQVAADSSDAIGSGWSYINEPVGISKDDA-FTKPGLLEQINTTADQSDYLWYSLS 484
S+ + ++ S W NE + + D+ F++ GL+EQI+ T D++DY WY
Sbjct: 422 ---SSIHMKMVPTNTPFS-WGSYNEEIPSANDNGTFSQDGLVEQISITRDKTDYFWYLTD 477
Query: 485 TNIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVG 521
I DE L G +L + S GHALH F+NG+L G
Sbjct: 478 ITISPDEKFLT-GEDPLLTIGSAGHALHVFVNGQLAG 513
|
|
| TAIR|locus:2046452 BGAL9 "beta galactosidase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1706 (605.6 bits), Expect = 1.2e-175, P = 1.2e-175
Identities = 312/501 (62%), Positives = 377/501 (75%)
Query: 7 LLLVLCWGFVVLATTSFGA-NVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKS 65
L++ L F +L+ + F NV+YDHRA++I GKRR+L+S IHYPR+TPEMW DLI KS
Sbjct: 17 LIIALLVYFPILSGSYFKPFNVSYDHRALIIAGKRRMLVSAGIHYPRATPEMWSDLIAKS 76
Query: 66 KDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNF 125
K+GG DV++TYVFWN HEPV+ QYNFEGRYDLVKFVKL+ +GLY HLRIGPYVCAEWNF
Sbjct: 77 KEGGADVVQTYVFWNGHEPVKGQYNFEGRYDLVKFVKLIGSSGLYLHLRIGPYVCAEWNF 136
Query: 126 GGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185
GGFP+WL IPGI+FRTDNEPFK EMQ+F KIVD+M++ KL+ QGGPII+ QIENEYG
Sbjct: 137 GGFPVWLRDIPGIEFRTDNEPFKKEMQKFVTKIVDLMREAKLFCWQGGPIIMLQIENEYG 196
Query: 186 NIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNN 245
+++ +YG GK Y+KWAA MAL L GVPWVMC+Q+DAP+ II+ CNG+YCD F PNS
Sbjct: 197 DVEKSYGQKGKDYVKWAASMALGLGAGVPWVMCKQTDAPENIIDACNGYYCDGFKPNSRT 256
Query: 246 KPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGG 305
KP +WTE+W GW+ +GG++P+RP EDLAFAVARF+QRGG+FQNYYMY GGTNF RTSGG
Sbjct: 257 KPVLWTEDWDGWYTKWGGSLPHRPAEDLAFAVARFYQRGGSFQNYYMYFGGTNFGRTSGG 316
Query: 306 PFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATD-PTYPSLGPNLEATV 364
PF TSYDYDAPLDEYGL +PKWGHLKDLH AIKLCE ALVA D P Y LG EA +
Sbjct: 317 PFYITSYDYDAPLDEYGLRSEPKWGHLKDLHAAIKLCEPALVAADAPQYRKLGSKQEAHI 376
Query: 365 Y----KTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSV 420
Y +TG +C+AFLANI + VKFNG SY LP WSVSILPDC++V FNTAK+ +
Sbjct: 377 YHGDGETGGKVCAAFLANIDEHKSAHVKFNGQSYTLPPWSVSILPDCRHVAFNTAKVGAQ 436
Query: 421 TLV-------PSFSRQS-LQ--VAADSSDAIGSGWSYINEPVGISKDDAFTKPGLLEQIN 470
T V PS S LQ V D+ I W + EP+GI ++ FT GLLE +N
Sbjct: 437 TSVKTVESARPSLGSMSILQKVVRQDNVSYISKSWMALKEPIGIWGENNFTFQGLLEHLN 496
Query: 471 TTADQSDYLWYSLSTNIKADE 491
T D+SDYLW+ ++ D+
Sbjct: 497 VTKDRSDYLWHKTRISVSEDD 517
|
|
| TAIR|locus:2085131 BGAL2 "beta-galactosidase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1705 (605.2 bits), Expect = 1.6e-175, P = 1.6e-175
Identities = 320/516 (62%), Positives = 390/516 (75%)
Query: 6 ILLLVLCWGFVVLATTSFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKS 65
I+L +LC+ ++ +T A VTYDH+A++I G+RR+LISGSIHYPRSTPEMWPDLI+K+
Sbjct: 11 IILAILCFSSLIHSTE---AVVTYDHKALIINGQRRILISGSIHYPRSTPEMWPDLIKKA 67
Query: 66 KDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNF 125
K+GGLDVI+TYVFWN HEP Y F+ RYDLVKF KLV +AGLY LRIGPYVCAEWNF
Sbjct: 68 KEGGLDVIQTYVFWNGHEPSPGNYYFQDRYDLVKFTKLVHQAGLYLDLRIGPYVCAEWNF 127
Query: 126 GGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185
GGFP+WL ++PG+ FRTDNEPFK MQ+FT KIVDMMK+EKL+ +QGGPIILSQIENEYG
Sbjct: 128 GGFPVWLKYVPGMVFRTDNEPFKIAMQKFTKKIVDMMKEEKLFETQGGPIILSQIENEYG 187
Query: 186 NIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNN 245
+ GAAGK+Y KW A MAL L TGVPW+MC+Q DAP PII+TCNGFYC+ F PNS+N
Sbjct: 188 PMQWEMGAAGKAYSKWTAEMALGLSTGVPWIMCKQEDAPYPIIDTCNGFYCEGFKPNSDN 247
Query: 246 KPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGG 305
KPK+WTENW+GWF FGGA+P RPVED+AF+VARF Q GG+F NYYMY+GGTNFDRT+G
Sbjct: 248 KPKLWTENWTGWFTEFGGAIPNRPVEDIAFSVARFIQNGGSFMNYYMYYGGTNFDRTAG- 306
Query: 306 PFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVY 365
FI+TSYDYDAP+DEYGL+R+PK+ HLK+LHK IKLCE ALV+ DPT SLG E V+
Sbjct: 307 VFIATSYDYDAPIDEYGLLREPKYSHLKELHKVIKLCEPALVSVDPTITSLGDKQEIHVF 366
Query: 366 KTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPS 425
K+ + C+AFL+N T+S V F G Y LP WSVSILPDCK +NTAKI + T++
Sbjct: 367 KSKTS-CAAFLSNYDTSSAARVMFRGFPYDLPPWSVSILPDCKTEYYNTAKIRAPTILMK 425
Query: 426 FSRQSLQVAADSSDAIGSGWSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLST 485
S + + +S + GS S NE G F K GL+EQI+ T D++DY WY
Sbjct: 426 MIPTSTKFSWESYNE-GSPSS--NE-AG-----TFVKDGLVEQISMTRDKTDYFWYFTDI 476
Query: 486 NIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVG 521
I +DE L+ G +L + S GHALH F+NG L G
Sbjct: 477 TIGSDESFLKTGDNPLLTIFSAGHALHVFVNGLLAG 512
|
|
| TAIR|locus:2028265 BGAL5 "beta-galactosidase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1675 (594.7 bits), Expect = 2.4e-172, P = 2.4e-172
Identities = 314/501 (62%), Positives = 366/501 (73%)
Query: 25 ANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEP 84
++VTYD +A+VI G RR+L+SGSIHYPRSTPEMW DLI+K+KDGGLDVI+TYVFWN HEP
Sbjct: 29 SSVTYDKKAIVINGHRRILLSGSIHYPRSTPEMWEDLIKKAKDGGLDVIDTYVFWNGHEP 88
Query: 85 VRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDN 144
YNFEGRYDLV+F+K + E GLY HLRIGPYVCAEWNFGGFP+WL ++ GI FRTDN
Sbjct: 89 SPGTYNFEGRYDLVRFIKTIQEVGLYVHLRIGPYVCAEWNFGGFPVWLKYVDGISFRTDN 148
Query: 145 EPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAG 204
PFK+ MQ FT KIV MMK+ + +ASQGGPIILSQIENE+ G AG SY+ WAA
Sbjct: 149 GPFKSAMQGFTEKIVQMMKEHRFFASQGGPIILSQIENEFEPDLKGLGPAGHSYVNWAAK 208
Query: 205 MALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNNKPKMWTENWSGWFLSFGGA 264
MA+ L+TGVPWVMC++ DAPDPIINTCNGFYCD FTPN KP MWTE WSGWF FGG
Sbjct: 209 MAVGLNTGVPWVMCKEDDAPDPIINTCNGFYCDYFTPNKPYKPTMWTEAWSGWFTEFGGT 268
Query: 265 VPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLI 324
VP RPVEDLAF VARF Q+GG++ NYYMYHGGTNF RT+GGPFI+TSYDYDAP+DEYGL+
Sbjct: 269 VPKRPVEDLAFGVARFIQKGGSYINYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLV 328
Query: 325 RQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVYKTGSGLCSAFLANIGTNSD 384
++PK+ HLK LH+AIK CEAALV++DP LG EA V+ G G C AFL N N+
Sbjct: 329 QEPKYSHLKQLHQAIKQCEAALVSSDPHVTKLGNYEEAHVFTAGKGSCVAFLTNYHMNAP 388
Query: 385 VTVKFNGNSYLLPAWSVSILPDCKNVVFNTA----KINSVTLVPSFSRQSLQVAADSSDA 440
V FN Y LPAWS+SILPDC+NVVFNTA K + V +VPS S L A +
Sbjct: 389 AKVVFNNRHYTLPAWSISILPDCRNVVFNTATVAAKTSHVQMVPSGS--ILYSVARYDED 446
Query: 441 IGSGWSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLSTNIKADEPLLEDGSKT 500
I + Y N T GLLEQ+N T D +DYLWY+ S +IKA E L G
Sbjct: 447 IAT---YGNR-------GTITARGLLEQVNVTRDTTDYLWYTTSVDIKASESFLRGGKWP 496
Query: 501 VLHVQSLGHALHAFINGKLVG 521
L V S GHA+H F+NG G
Sbjct: 497 TLTVDSAGHAVHVFVNGHFYG 517
|
|
| TAIR|locus:2170282 BGAL4 "beta-galactosidase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1659 (589.1 bits), Expect = 1.2e-170, P = 1.2e-170
Identities = 314/517 (60%), Positives = 379/517 (73%)
Query: 6 ILLLVLCWGFVVLATTSFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKS 65
I L +LC + + A+V+YD +AV+I G+RR+L+SGSIHYPRSTPEMWP LIQK+
Sbjct: 11 IFLAILC---CLSLSCIVKASVSYDRKAVIINGQRRILLSGSIHYPRSTPEMWPGLIQKA 67
Query: 66 KDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNF 125
K+GGLDVIETYVFWN HEP QY F RYDLVKF+KLV +AGLY +LRIGPYVCAEWNF
Sbjct: 68 KEGGLDVIETYVFWNGHEPSPGQYYFGDRYDLVKFIKLVHQAGLYVNLRIGPYVCAEWNF 127
Query: 126 GGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185
GGFP+WL F+PG+ FRTDNEPFKA M++FT KIV MMK EKL+ +QGGPIIL+QIENEYG
Sbjct: 128 GGFPVWLKFVPGMAFRTDNEPFKAAMKKFTEKIVWMMKAEKLFQTQGGPIILAQIENEYG 187
Query: 186 NIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNN 245
++ GA GK+Y KW A MAL L TGVPW+MC+Q DAP PII+TCNG+YC+ F PNS N
Sbjct: 188 PVEWEIGAPGKAYTKWVAQMALGLSTGVPWIMCKQEDAPGPIIDTCNGYYCEDFKPNSIN 247
Query: 246 KPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGG 305
KPKMWTENW+GW+ FGGAVPYRPVED+A++VARF Q+GG+ NYYMYHGGTNFDRT+G
Sbjct: 248 KPKMWTENWTGWYTDFGGAVPYRPVEDIAYSVARFIQKGGSLVNYYMYHGGTNFDRTAG- 306
Query: 306 PFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVY 365
F+++SYDYDAPLDEYGL R+PK+ HLK LHKAIKL E AL++ D T SLG EA V+
Sbjct: 307 EFMASSYDYDAPLDEYGLPREPKYSHLKALHKAIKLSEPALLSADATVTSLGAKQEAYVF 366
Query: 366 KTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPS 425
+ S C+AFL+N NS V F G Y LP WSVSILPDCK V+NTAK+N+ PS
Sbjct: 367 WSKSS-CAAFLSNKDENSAARVLFRGFPYDLPPWSVSILPDCKTEVYNTAKVNA----PS 421
Query: 426 FSRQSLQVAADSSDAIGSGWSYINEPVGISKD-DAFTKPGLLEQINTTADQSDYLWYSLS 484
R + S W NE + + F + GL+EQI+ T D+SDY WY
Sbjct: 422 VHRNMVPTGTKFS------WGSFNEATPTANEAGTFARNGLVEQISMTWDKSDYFWYITD 475
Query: 485 TNIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVG 521
I + E L+ G +L V S GHALH F+NG+L G
Sbjct: 476 ITIGSGETFLKTGDSPLLTVMSAGHALHVFVNGQLSG 512
|
|
| TAIR|locus:2163951 BGAL10 "beta-galactosidase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1586 (563.4 bits), Expect = 6.3e-163, P = 6.3e-163
Identities = 289/521 (55%), Positives = 377/521 (72%)
Query: 1 MASKEILLLVLCWGFVVLATTSFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPD 60
+AS IL++++ F+ + ANV+YDHR++ IG +R+++IS +IHYPRS P MWP
Sbjct: 9 IASTAILVVMV---FLFSWRSIEAANVSYDHRSLTIGNRRQLIISAAIHYPRSVPAMWPS 65
Query: 61 LIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVC 120
L+Q +K+GG + IE+YVFWN HEP +Y F GRY++VKF+K+V +AG++ LRIGP+V
Sbjct: 66 LVQTAKEGGCNAIESYVFWNGHEPSPGKYYFGGRYNIVKFIKIVQQAGMHMILRIGPFVA 125
Query: 121 AEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQI 180
AEWN+GG P+WLH++PG FR DNEP+K M+ FT IV+++KQEKL+A QGGPIILSQ+
Sbjct: 126 AEWNYGGVPVWLHYVPGTVFRADNEPWKHYMESFTTYIVNLLKQEKLFAPQGGPIILSQV 185
Query: 181 ENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFT 240
ENEYG + YG GK Y +W+A MA+S + GVPW+MCQQ DAP +I+TCNGFYCDQFT
Sbjct: 186 ENEYGYYEKDYGEGGKRYAQWSASMAVSQNIGVPWMMCQQWDAPPTVISTCNGFYCDQFT 245
Query: 241 PNSNNKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFD 300
PN+ +KPK+WTENW GWF +FGG P+RP ED+A++VARFF +GG+ NYYMYHGGTNF
Sbjct: 246 PNTPDKPKIWTENWPGWFKTFGGRDPHRPAEDVAYSVARFFGKGGSVHNYYMYHGGTNFG 305
Query: 301 RTSGGPFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNL 360
RTSGGPFI+TSYDY+AP+DEYGL R PKWGHLKDLHKAI L E L++ + +LG +L
Sbjct: 306 RTSGGPFITTSYDYEAPIDEYGLPRLPKWGHLKDLHKAIMLSENLLISGEHQNFTLGHSL 365
Query: 361 EATVYKTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSV 420
EA VY SG C+AFL+N+ +D V F SY LPAWSVSILPDCK VFNTAK+ S
Sbjct: 366 EADVYTDSSGTCAAFLSNLDDKNDKAVMFRNTSYHLPAWSVSILPDCKTEVFNTAKVTSK 425
Query: 421 TLVPSFSRQSLQVAADSSDAIGSGWSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLW 480
+ S+ + + D + G W +E GI F K L++ INTT D +DYLW
Sbjct: 426 S-----SKVEM-LPEDLKSSSGLKWEVFSEKPGIWGAADFVKNELVDHINTTKDTTDYLW 479
Query: 481 YSLSTNIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVG 521
Y+ S + +E L+ GS VL ++S GH LH FIN + +G
Sbjct: 480 YTTSITVSENEAFLKKGSSPVLFIESKGHTLHVFINKEYLG 520
|
|
| TAIR|locus:2180439 BGAL7 "beta-galactosidase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1553 (551.7 bits), Expect = 2.0e-159, P = 2.0e-159
Identities = 287/515 (55%), Positives = 363/515 (70%)
Query: 15 FVVLATTSFGAN--VTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDV 72
F+++ + S + V++D RA+ I GKRR+L+SGSIHYPRST +MWPDLI K+KDGGLD
Sbjct: 14 FILITSLSLAKSTIVSHDERAITINGKRRILLSGSIHYPRSTADMWPDLINKAKDGGLDA 73
Query: 73 IETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWL 132
IETYVFWN HEP R +Y+F G D+V+F+K + +AGLY+ LRIGPYVCAEWN+GGFP+WL
Sbjct: 74 IETYVFWNAHEPKRREYDFSGNLDVVRFIKTIQDAGLYSVLRIGPYVCAEWNYGGFPVWL 133
Query: 133 HFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYG 192
H +P ++FRT N F EMQ FT KIV MMK+EKL+ASQGGPIIL+QIENEYGN+ S+YG
Sbjct: 134 HNMPNMKFRTVNPSFMNEMQNFTTKIVKMMKEEKLFASQGGPIILAQIENEYGNVISSYG 193
Query: 193 AAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNNKPKMWTE 252
A GK+YI W A MA SLD GVPW+MCQQ +AP P++ TCNGFYCDQ+ P + + PKMWTE
Sbjct: 194 AEGKAYIDWCANMANSLDIGVPWLMCQQPNAPQPMLETCNGFYCDQYEPTNPSTPKMWTE 253
Query: 253 NWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSY 312
NW+GWF ++GG PYR EDLAF+VARFFQ GGTFQNYYMYHGGTNF R +GGP+I+TSY
Sbjct: 254 NWTGWFKNWGGKHPYRTAEDLAFSVARFFQTGGTFQNYYMYHGGTNFGRVAGGPYITTSY 313
Query: 313 DYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVYKTGSGLC 372
DY APLDE+G + QPKWGHLK LH +K E +L + + LG +++AT+Y T G
Sbjct: 314 DYHAPLDEFGNLNQPKWGHLKQLHTVLKSMEKSLTYGNISRIDLGNSIKATIYTTKEG-S 372
Query: 373 SAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSFSRQSLQ 432
S F+ N+ +D V F G Y +PAWSVS+LPDC +NTAK+N+ T +
Sbjct: 373 SCFIGNVNATADALVNFKGKDYHVPAWSVSVLPDCDKEAYNTAKVNTQTSI--------- 423
Query: 433 VAADSSDAIGSGWSYINEPVG--ISKD--DAFTKPGLLEQINTTADQSDYLWYSLSTNIK 488
+ DSS W++ E I K D K GL++Q + T D SDYLWY ++
Sbjct: 424 MTEDSSKPERLEWTWRPESAQKMILKGSGDLIAK-GLVDQKDVTNDASDYLWYMTRLHLD 482
Query: 489 ADEPLLEDGSKTVLHVQSLGHALHAFINGKLVGEE 523
+PL L V S H LHA++NGK VG +
Sbjct: 483 KKDPLWS--RNMTLRVHSNAHVLHAYVNGKYVGNQ 515
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SCV4 | BGAL8_ARATH | 3, ., 2, ., 1, ., 2, 3 | 0.8269 | 0.9502 | 0.5833 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| gw1.IX.4803.1 | hypothetical protein (828 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| POPTRKOR1 | endo-1,4-beta-glucanase (619 aa) | • | 0.435 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 523 | |||
| PLN03059 | 840 | PLN03059, PLN03059, beta-galactosidase; Provisiona | 0.0 | |
| pfam01301 | 318 | pfam01301, Glyco_hydro_35, Glycosyl hydrolases fam | 1e-173 | |
| COG1874 | 673 | COG1874, LacA, Beta-galactosidase [Carbohydrate tr | 2e-23 | |
| pfam02449 | 376 | pfam02449, Glyco_hydro_42, Beta-galactosidase | 2e-06 |
| >gnl|CDD|166698 PLN03059, PLN03059, beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Score = 747 bits (1930), Expect = 0.0
Identities = 332/516 (64%), Positives = 382/516 (74%), Gaps = 10/516 (1%)
Query: 6 ILLLVLCWGFVVLATTSFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKS 65
LLL L + + A+V+YDHRA +I G+RR+LISGSIHYPRSTPEMWPDLIQK+
Sbjct: 9 FLLLFLLFLLSSSWVSHGSASVSYDHRAFIINGQRRILISGSIHYPRSTPEMWPDLIQKA 68
Query: 66 KDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNF 125
KDGGLDVI+TYVFWN HEP Y FE RYDLVKF+K+V AGLY HLRIGPY+CAEWNF
Sbjct: 69 KDGGLDVIQTYVFWNGHEPSPGNYYFEDRYDLVKFIKVVQAAGLYVHLRIGPYICAEWNF 128
Query: 126 GGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185
GGFP+WL ++PGI+FRTDN PFKA MQ+FT KIVDMMK EKL+ QGGPIILSQIENEYG
Sbjct: 129 GGFPVWLKYVPGIEFRTDNGPFKAAMQKFTEKIVDMMKSEKLFEPQGGPIILSQIENEYG 188
Query: 186 NIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNN 245
++ GA GK+Y KWAA MA+ L TGVPWVMC+Q DAPDP+I+TCNGFYC+ F PN +
Sbjct: 189 PVEWEIGAPGKAYTKWAADMAVKLGTGVPWVMCKQEDAPDPVIDTCNGFYCENFKPNKDY 248
Query: 246 KPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGG 305
KPKMWTE W+GW+ FGGAVP RP EDLAF+VARF Q GG+F NYYMYHGGTNF RT+GG
Sbjct: 249 KPKMWTEAWTGWYTEFGGAVPNRPAEDLAFSVARFIQNGGSFINYYMYHGGTNFGRTAGG 308
Query: 306 PFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVY 365
PFI+TSYDYDAPLDEYGL R+PKWGHL+DLHKAIKLCE ALV+ DPT SLG N EA V+
Sbjct: 309 PFIATSYDYDAPLDEYGLPREPKWGHLRDLHKAIKLCEPALVSVDPTVTSLGSNQEAHVF 368
Query: 366 KTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPS 425
K+ S C+AFLAN T V V F Y LP WSVSILPDCK VFNTA++ +
Sbjct: 369 KSKS-ACAAFLANYDTKYSVKVTFGNGQYDLPPWSVSILPDCKTAVFNTARLGA------ 421
Query: 426 FSRQSLQVAADSSDAIGSGWSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLST 485
QS Q+ + + S SY E DD T GL EQIN T D +DYLWY
Sbjct: 422 ---QSSQMKMNPVGSTFSWQSYNEETASAYTDDTTTMDGLWEQINVTRDATDYLWYMTEV 478
Query: 486 NIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVG 521
+I DE L+ G VL + S GHALH FING+L G
Sbjct: 479 HIDPDEGFLKTGQYPVLTIFSAGHALHVFINGQLAG 514
|
Length = 840 |
| >gnl|CDD|216423 pfam01301, Glyco_hydro_35, Glycosyl hydrolases family 35 | Back alignment and domain information |
|---|
Score = 490 bits (1263), Expect = e-173
Identities = 173/320 (54%), Positives = 203/320 (63%), Gaps = 19/320 (5%)
Query: 35 VIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGR 94
+I G+R LISGSIHY R PEMWPD +QK+K GL+ IETYVFWNLHEP QY+F G
Sbjct: 3 LIDGQRFRLISGSIHYFRIPPEMWPDRLQKAKALGLNTIETYVFWNLHEPEPGQYDFSGI 62
Query: 95 YDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRF 154
DLVKF+KL EAGLY LR GPY+CAEW+FGG P WL +PGI+ RT + PF + R+
Sbjct: 63 LDLVKFIKLAQEAGLYVILRPGPYICAEWDFGGLPAWLLRVPGIRLRTSDPPFLEAVDRY 122
Query: 155 TAKIVDMMKQEKLYASQGGPIILSQIENEYG--NIDSAYGAA-GKSYIKWAAGMALSLDT 211
++ MK L A+ GGPIIL QIENEYG +D AY A K Y +W A MA+ T
Sbjct: 123 LTALLPKMK--PLQATNGGPIILVQIENEYGSYGVDKAYLQALRKLYREWGADMAVLFTT 180
Query: 212 GVPWVMCQQ-SDAPDPIINTCNGFYCDQ--------FTPNSNNKPKMWTENWSGWFLSFG 262
PW MC Q D PDP+I T NGF C P S N P MW+E W+GWF +G
Sbjct: 181 DGPWGMCLQCGDLPDPVIYTTNGFGCGANPTSIFGLLRPFSPNGPLMWSEFWTGWFDHWG 240
Query: 263 GAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFIS---TSYDYDAPLD 319
G +RP EDLAF+V RF RG N YM+HGGTNF T+G F TSYDYDAPLD
Sbjct: 241 GPHHHRPAEDLAFSVERFLARGS-SVNLYMFHGGTNFGFTNGANFYGPQTTSYDYDAPLD 299
Query: 320 EYGLIRQPKWGHLKDLHKAI 339
E G PK+G L+DL A
Sbjct: 300 EAGDPT-PKYGALRDLIAAY 318
|
Length = 318 |
| >gnl|CDD|224786 COG1874, LacA, Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 2e-23
Identities = 80/367 (21%), Positives = 128/367 (34%), Gaps = 94/367 (25%)
Query: 27 VTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIET-YVFWNLHEPV 85
V+YD + + G+R +L G + R E W D ++K K GL+ + Y WNLHEP
Sbjct: 1 VSYDGYSFIRDGRRILLYGGDYYPERWPRETWMDDLRKMKALGLNTVRIGYFAWNLHEPE 60
Query: 86 RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGP-YVCAEWNFGGFPLWLH--------FIP 136
+++F D + F++ +AGLY LR GP W +P L
Sbjct: 61 EGKFDFTWL-DEI-FLERAYKAGLYVILRTGPTGAPPAWLAKKYPEILAVDENGRVRSDG 118
Query: 137 GIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG----------- 185
+ P + + +I+ ++ E+LY G +I Q +NEYG
Sbjct: 119 ARENICPVSPV---YREYLDRILQQIR-ERLY-GNGPAVITWQNDNEYGGHPCYCDYCQA 173
Query: 186 --------------NIDSAYGAAGKS--YIKWAAGMALSLDTGVPWVMCQQSDAPDPIIN 229
N++ A+G + S Y + M+ + + P P
Sbjct: 174 AFRLWLKKGYGSLDNLNEAWGTSFWSHTYKDFDEIMSPNP----------FGELPLP--- 220
Query: 230 TCNGFYCD--QFTPNSNNK-PKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGT 286
G Y D +F + + E +F P RPV A + F
Sbjct: 221 ---GLYLDYRRFESEQILEFVREEGEAIKAYF-------PNRPVTPNLLAAFKKFDAYKW 270
Query: 287 FQ--------NYYMYHGGTNFDRT---------SGGPFI-------STSYDYDAPLDEYG 322
+ NY +H G +F + G PF ++ L G
Sbjct: 271 EKVLDFASWDNYPAWHRGRDFTKFIHDLFRNGKQGQPFWLMEQLPSVVNWALYNKLKRPG 330
Query: 323 LIRQPKW 329
+R P
Sbjct: 331 ALRLPSL 337
|
Length = 673 |
| >gnl|CDD|217042 pfam02449, Glyco_hydro_42, Beta-galactosidase | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 2e-06
Identities = 34/159 (21%), Positives = 58/159 (36%), Gaps = 37/159 (23%)
Query: 49 HYPRSTPEMWPDLIQKSKDGGLDVIETYVF-WNLHEPVRNQYNFEGRYDLVKFVKLVAEA 107
+P T W + I+ K+ G++V+ +F W EP +Y+F L + + L+A+A
Sbjct: 6 QWPEET---WEEDIRLMKEAGVNVVRLGIFAWAKLEPEEGKYDFGW---LDEIIDLLAKA 59
Query: 108 GLYAHLRIGPYVCAEWNFGGFPLWL----------------HFIPGIQFRTDNEPFKAEM 151
G+ L P WL + P
Sbjct: 60 GIKVILATPT--------AAPPAWLAKKHPEILPVDADGRRRGFGSRHHYCPSSPV---Y 108
Query: 152 QRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSA 190
+ + A+IV+ + + Y +I I+NEYG S
Sbjct: 109 REYAARIVEAL--AERYG-DHPALIGWHIDNEYGCHVSE 144
|
This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. Length = 376 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 523 | |||
| PLN03059 | 840 | beta-galactosidase; Provisional | 100.0 | |
| KOG0496 | 649 | consensus Beta-galactosidase [Carbohydrate transpo | 100.0 | |
| PF01301 | 319 | Glyco_hydro_35: Glycosyl hydrolases family 35; Int | 100.0 | |
| COG1874 | 673 | LacA Beta-galactosidase [Carbohydrate transport an | 100.0 | |
| PF02449 | 374 | Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 | 99.81 | |
| PF02836 | 298 | Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM | 99.47 | |
| PRK10150 | 604 | beta-D-glucuronidase; Provisional | 99.22 | |
| PRK10340 | 1021 | ebgA cryptic beta-D-galactosidase subunit alpha; R | 99.1 | |
| PRK09525 | 1027 | lacZ beta-D-galactosidase; Reviewed | 99.09 | |
| PF00150 | 281 | Cellulase: Cellulase (glycosyl hydrolase family 5) | 99.04 | |
| COG3250 | 808 | LacZ Beta-galactosidase/beta-glucuronidase [Carboh | 98.95 | |
| smart00633 | 254 | Glyco_10 Glycosyl hydrolase family 10. | 98.37 | |
| PF03198 | 314 | Glyco_hydro_72: Glucanosyltransferase; InterPro: I | 98.32 | |
| TIGR03356 | 427 | BGL beta-galactosidase. | 98.0 | |
| PLN02705 | 681 | beta-amylase | 97.89 | |
| PF13364 | 111 | BetaGal_dom4_5: Beta-galactosidase jelly roll doma | 97.89 | |
| PLN02905 | 702 | beta-amylase | 97.88 | |
| PF13204 | 289 | DUF4038: Protein of unknown function (DUF4038); PD | 97.83 | |
| PLN02801 | 517 | beta-amylase | 97.81 | |
| PLN02161 | 531 | beta-amylase | 97.8 | |
| PLN00197 | 573 | beta-amylase; Provisional | 97.75 | |
| PLN02803 | 548 | beta-amylase | 97.74 | |
| PF07745 | 332 | Glyco_hydro_53: Glycosyl hydrolase family 53; Inte | 97.43 | |
| PF01373 | 402 | Glyco_hydro_14: Glycosyl hydrolase family 14; Inte | 97.36 | |
| PF00331 | 320 | Glyco_hydro_10: Glycosyl hydrolase family 10; Inte | 97.32 | |
| PF00232 | 455 | Glyco_hydro_1: Glycosyl hydrolase family 1; InterP | 97.19 | |
| PRK15014 | 477 | 6-phospho-beta-glucosidase BglA; Provisional | 97.03 | |
| PF02055 | 496 | Glyco_hydro_30: O-Glycosyl hydrolase family 30; In | 96.94 | |
| PF14488 | 166 | DUF4434: Domain of unknown function (DUF4434) | 96.84 | |
| PRK09852 | 474 | cryptic 6-phospho-beta-glucosidase; Provisional | 96.84 | |
| COG3693 | 345 | XynA Beta-1,4-xylanase [Carbohydrate transport and | 96.78 | |
| smart00812 | 384 | Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydro | 96.76 | |
| COG2730 | 407 | BglC Endoglucanase [Carbohydrate transport and met | 96.69 | |
| PLN02998 | 497 | beta-glucosidase | 96.64 | |
| COG3867 | 403 | Arabinogalactan endo-1,4-beta-galactosidase [Carbo | 96.62 | |
| PRK13511 | 469 | 6-phospho-beta-galactosidase; Provisional | 96.59 | |
| PRK09593 | 478 | arb 6-phospho-beta-glucosidase; Reviewed | 96.57 | |
| TIGR01233 | 467 | lacG 6-phospho-beta-galactosidase. This enzyme is | 96.53 | |
| PLN02814 | 504 | beta-glucosidase | 96.49 | |
| PRK09589 | 476 | celA 6-phospho-beta-glucosidase; Reviewed | 96.46 | |
| PF02837 | 167 | Glyco_hydro_2_N: Glycosyl hydrolases family 2, sug | 96.45 | |
| PLN02849 | 503 | beta-glucosidase | 96.32 | |
| COG2723 | 460 | BglB Beta-glucosidase/6-phospho-beta-glucosidase/b | 95.94 | |
| PF14871 | 132 | GHL6: Hypothetical glycosyl hydrolase 6 | 95.69 | |
| KOG2230 | 867 | consensus Predicted beta-mannosidase [Carbohydrate | 95.26 | |
| COG3934 | 587 | Endo-beta-mannanase [Carbohydrate transport and me | 94.07 | |
| TIGR01515 | 613 | branching_enzym alpha-1,4-glucan:alpha-1,4-glucan | 94.06 | |
| TIGR00542 | 279 | hxl6Piso_put hexulose-6-phosphate isomerase, putat | 93.73 | |
| PF01229 | 486 | Glyco_hydro_39: Glycosyl hydrolases family 39; Int | 93.31 | |
| PRK05402 | 726 | glycogen branching enzyme; Provisional | 92.66 | |
| PRK14706 | 639 | glycogen branching enzyme; Provisional | 92.27 | |
| smart00642 | 166 | Aamy Alpha-amylase domain. | 91.1 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 90.76 | |
| PRK13210 | 284 | putative L-xylulose 5-phosphate 3-epimerase; Revie | 90.72 | |
| PRK12568 | 730 | glycogen branching enzyme; Provisional | 89.97 | |
| PRK09936 | 296 | hypothetical protein; Provisional | 89.92 | |
| cd00019 | 279 | AP2Ec AP endonuclease family 2; These endonuclease | 89.42 | |
| PF01120 | 346 | Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00 | 89.37 | |
| PLN02447 | 758 | 1,4-alpha-glucan-branching enzyme | 88.77 | |
| PF01261 | 213 | AP_endonuc_2: Xylose isomerase-like TIM barrel; In | 88.65 | |
| PF05913 | 357 | DUF871: Bacterial protein of unknown function (DUF | 87.33 | |
| PRK14705 | 1224 | glycogen branching enzyme; Provisional | 87.02 | |
| PRK12313 | 633 | glycogen branching enzyme; Provisional | 86.99 | |
| PF14307 | 345 | Glyco_tran_WbsX: Glycosyltransferase WbsX | 86.67 | |
| TIGR02631 | 382 | xylA_Arthro xylose isomerase, Arthrobacter type. T | 86.49 | |
| TIGR03234 | 254 | OH-pyruv-isom hydroxypyruvate isomerase. This enzy | 86.19 | |
| PRK09441 | 479 | cytoplasmic alpha-amylase; Reviewed | 85.91 | |
| PF13200 | 316 | DUF4015: Putative glycosyl hydrolase domain | 85.27 | |
| PRK13209 | 283 | L-xylulose 5-phosphate 3-epimerase; Reviewed | 84.96 | |
| PF00128 | 316 | Alpha-amylase: Alpha amylase, catalytic domain; In | 84.85 | |
| PRK09997 | 258 | hydroxypyruvate isomerase; Provisional | 84.78 | |
| PRK09856 | 275 | fructoselysine 3-epimerase; Provisional | 84.38 | |
| TIGR01531 | 1464 | glyc_debranch glycogen debranching enzymye. glycog | 83.18 | |
| PRK01060 | 281 | endonuclease IV; Provisional | 82.68 | |
| cd06593 | 308 | GH31_xylosidase_YicI YicI alpha-xylosidase is a gl | 81.89 | |
| PF07172 | 95 | GRP: Glycine rich protein family; InterPro: IPR010 | 81.48 | |
| cd06595 | 292 | GH31_xylosidase_XylS-like This family represents a | 81.34 | |
| PF02065 | 394 | Melibiase: Melibiase; InterPro: IPR000111 O-Glycos | 81.28 | |
| PRK09989 | 258 | hypothetical protein; Provisional | 81.06 | |
| COG1649 | 418 | Uncharacterized protein conserved in bacteria [Fun | 80.88 | |
| cd06592 | 303 | GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact | 80.62 | |
| PRK10150 | 604 | beta-D-glucuronidase; Provisional | 80.49 | |
| PF13199 | 559 | Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: | 80.27 |
| >PLN03059 beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-153 Score=1270.55 Aligned_cols=507 Identities=65% Similarity=1.154 Sum_probs=476.0
Q ss_pred hHHHHHHHHHHHHHhhcCCeeEEEecceEEECCEEEEEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCC
Q 009890 6 ILLLVLCWGFVVLATTSFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPV 85 (523)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vt~d~~~l~idGk~~~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~ 85 (523)
+++++++.+++.........+|+||+++|+|||||++|+||+|||||+||++|+|+|+||||+|+|+|+||||||+|||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~d~~~f~idG~p~~i~sG~iHY~R~~p~~W~d~L~k~Ka~GlNtV~tYV~Wn~HEp~ 88 (840)
T PLN03059 9 FLLLFLLFLLSSSWVSHGSASVSYDHRAFIINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPS 88 (840)
T ss_pred hhHHHHHHHhhhhhhccceeEEEEeCCEEEECCEEEEEEEeCcccCcCCHHHHHHHHHHHHHcCCCeEEEEecccccCCC
Confidence 34444443433322223567899999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhc
Q 009890 86 RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQE 165 (523)
Q Consensus 86 ~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~ 165 (523)
||+|||+|++||++||++|+++||||||||||||||||++||||.||+++|+|++||+||+|+++|++|+++|+++|+++
T Consensus 89 ~G~~dF~G~~DL~~Fl~la~e~GLyvilRpGPYIcAEw~~GGlP~WL~~~~~i~~Rs~d~~fl~~v~~~~~~l~~~l~~~ 168 (840)
T PLN03059 89 PGNYYFEDRYDLVKFIKVVQAAGLYVHLRIGPYICAEWNFGGFPVWLKYVPGIEFRTDNGPFKAAMQKFTEKIVDMMKSE 168 (840)
T ss_pred CCeeeccchHHHHHHHHHHHHcCCEEEecCCcceeeeecCCCCchhhhcCCCcccccCCHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCceEeccccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEccCCCCCCccccCCCCcccCCCCCCCCC
Q 009890 166 KLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNN 245 (523)
Q Consensus 166 ~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~~~~~p~~vi~~~ng~~~~~~~~~~~~ 245 (523)
+|++++||||||+|||||||++...++.++++||+||++|++++|++|||+||++.+++++++++|||.+|+.|.++++.
T Consensus 169 ~l~~~~GGPIImvQIENEYGs~~~~~~~~d~~Yl~~l~~~~~~~Gi~VPl~t~dg~~~~~~v~~t~Ng~~~~~f~~~~~~ 248 (840)
T PLN03059 169 KLFEPQGGPIILSQIENEYGPVEWEIGAPGKAYTKWAADMAVKLGTGVPWVMCKQEDAPDPVIDTCNGFYCENFKPNKDY 248 (840)
T ss_pred ceeecCCCcEEEEEecccccceecccCcchHHHHHHHHHHHHHcCCCcceEECCCCCCCccceecCCCchhhhcccCCCC
Confidence 99999999999999999999987778888999999999999999999999999998889999999999999999998888
Q ss_pred CCceEeeeccccccccCCCCCCCCHHHHHHHHHHHHhcCCeeeeeeeeccCCCCCCCCCCCcccccccCCCCCCcCCCCC
Q 009890 246 KPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLIR 325 (523)
Q Consensus 246 ~P~~~tE~~~Gwf~~wG~~~~~r~~~d~~~~~~~~~~~g~s~~nyYM~hGGTNfG~~~G~~~~~TSYDy~Api~E~G~~~ 325 (523)
+|+||+|+|+|||++||++++.|+++|+++.++++|++|+|++|||||||||||||++|+++++|||||||||+|+|+++
T Consensus 249 ~P~m~tE~w~GWf~~wG~~~~~r~~~d~a~~~~~~l~~g~S~~N~YMfhGGTNFG~~~Ga~~~~TSYDYdAPL~E~G~~t 328 (840)
T PLN03059 249 KPKMWTEAWTGWYTEFGGAVPNRPAEDLAFSVARFIQNGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLPR 328 (840)
T ss_pred CCcEEeccCchhHhhcCCCCCcCCHHHHHHHHHHHHHcCCeeEEeeeccCcCCcccccCCCccccccccCCccccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ChhHHHHHHHHHHHHHhhhcccCCCCCCCCCCCCceEEEEEcCCCceEEEEEeCCCCeeEEEEECCeEEEecCeeEEEcC
Q 009890 326 QPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVYKTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILP 405 (523)
Q Consensus 326 ~pKy~~lk~lh~~i~~~~~~L~~~~~~~~~lg~~~~~~v~~~~~~~~~~Fl~N~~~~~~~~V~f~~~~~~lp~~svsIlp 405 (523)
+|||.|||+||+++++|+++|+..+|...+||++||+++|...+ .|++|+.|++++.+++|+|+|++|.||||||||||
T Consensus 329 ~pKy~~lr~l~~~~~~~~~~l~~~~p~~~~lg~~~ea~~y~~~~-~caaFl~n~~~~~~~~v~f~g~~y~lp~~Svsilp 407 (840)
T PLN03059 329 EPKWGHLRDLHKAIKLCEPALVSVDPTVTSLGSNQEAHVFKSKS-ACAAFLANYDTKYSVKVTFGNGQYDLPPWSVSILP 407 (840)
T ss_pred hhHHHHHHHHHHHHHhcCccccCCCCceeccCCceeEEEccCcc-chhhheeccCCCCceeEEECCcccccCccceeecc
Confidence 89999999999999999999999999999999999999998766 79999999999999999999999999999999999
Q ss_pred CCCeEEeecceecCcccceeeeeccccccccCCCCCCcceeEeecc-CCCCCCCccccchhhhhhhccCCCceeeEEEeE
Q 009890 406 DCKNVVFNTAKINSVTLVPSFSRQSLQVAADSSDAIGSGWSYINEP-VGISKDDAFTKPGLLEQINTTADQSDYLWYSLS 484 (523)
Q Consensus 406 ~~~~v~~~Ta~v~~q~~~~~~~~~~~~~~~~~~~~~~~~W~~~~E~-~~~~~~~~~~~~~llEq~~~T~D~sDYLWY~T~ 484 (523)
||++++||||++++|++.+++.+. ...++|++++|+ ++.+++..++.++|+||||+|+|+||||||+|+
T Consensus 408 d~~~~lfnta~v~~q~~~~~~~~~----------~~~~~w~~~~e~~~~~~~~~~~~~e~l~e~~n~t~d~~dYlwY~t~ 477 (840)
T PLN03059 408 DCKTAVFNTARLGAQSSQMKMNPV----------GSTFSWQSYNEETASAYTDDTTTMDGLWEQINVTRDATDYLWYMTE 477 (840)
T ss_pred cccceeeeccccccccceeecccc----------cccccceeecccccccccCCCcchhhHHHhhcccCCCCceEEEEEE
Confidence 999999999999999877755322 245799999999 566677889999999999999999999999999
Q ss_pred EEecCCCccccCCCeeEEEEeecCcEEEEEEcCeeeecC
Q 009890 485 TNIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVGEE 523 (523)
Q Consensus 485 v~i~~~~~~~~~~~~~~L~v~s~gh~lh~FVNg~~~G~~ 523 (523)
|+++.++..++++.+|+|+|.|.+|++||||||+++|++
T Consensus 478 i~~~~~~~~~~~~~~~~L~v~~~~d~~~vFVNg~~~Gt~ 516 (840)
T PLN03059 478 VHIDPDEGFLKTGQYPVLTIFSAGHALHVFINGQLAGTV 516 (840)
T ss_pred EeecCCccccccCCCceEEEcccCcEEEEEECCEEEEEE
Confidence 999988876788999999999999999999999999974
|
|
| >KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-133 Score=1075.45 Aligned_cols=440 Identities=67% Similarity=1.184 Sum_probs=422.0
Q ss_pred CeeEEEecceEEECCEEEEEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHH
Q 009890 24 GANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKL 103 (523)
Q Consensus 24 ~~~vt~d~~~l~idGk~~~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~l 103 (523)
.+.|+||+++|+|||+|++++||+|||||++|+||+|+|+|||++|+|+|+||||||.|||+||+|||+|+.||++||++
T Consensus 17 ~~~v~yd~~~~~idG~r~~~isGsIHY~R~~pe~W~~~i~k~k~~Gln~IqtYVfWn~Hep~~g~y~FsG~~DlvkFikl 96 (649)
T KOG0496|consen 17 SFNVTYDKRSLLIDGQRFILISGSIHYPRSTPEMWPDLIKKAKAGGLNVIQTYVFWNLHEPSPGKYDFSGRYDLVKFIKL 96 (649)
T ss_pred eeEEeccccceeecCCeeEEEEeccccccCChhhhHHHHHHHHhcCCceeeeeeecccccCCCCcccccchhHHHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccc
Q 009890 104 VAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENE 183 (523)
Q Consensus 104 a~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENE 183 (523)
|+++||||+||+||||||||++||+|.||+.+|++.+||+|++|+++|++|+++|+++|| +|+++|||||||+|||||
T Consensus 97 ~~~~GLyv~LRiGPyIcaEw~~GG~P~wL~~~pg~~~Rt~nepfk~~~~~~~~~iv~~mk--~L~~~qGGPIIl~QIENE 174 (649)
T KOG0496|consen 97 IHKAGLYVILRIGPYICAEWNFGGLPWWLRNVPGIVFRTDNEPFKAEMERWTTKIVPMMK--KLFASQGGPIILVQIENE 174 (649)
T ss_pred HHHCCeEEEecCCCeEEecccCCCcchhhhhCCceEEecCChHHHHHHHHHHHHHHHHHH--HHHhhcCCCEEEEEeech
Confidence 999999999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred ccccccccCcccHHHHHHHHHHHHhcCCCcceEEccCCCCCCccccCCCCccc-CCCC-CCCCCCCceEeeecccccccc
Q 009890 184 YGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYC-DQFT-PNSNNKPKMWTENWSGWFLSF 261 (523)
Q Consensus 184 yg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~~~~~p~~vi~~~ng~~~-~~~~-~~~~~~P~~~tE~~~Gwf~~w 261 (523)
||.+..++++.+++|++|.+.|+..++.+|||+||+|.|+|+++|++|||++| +.|. |++|++|+||||+|+|||++|
T Consensus 175 YG~~~~~~~~~~k~y~~w~a~m~~~l~~gvpw~mCk~~dapd~~in~cng~~c~~~f~~pn~~~kP~~wtE~wtgwf~~w 254 (649)
T KOG0496|consen 175 YGNYLRALGAEGKSYLKWAAVLATSLGTGVPWVMCKQDDAPDPGINTCNGFYCGDTFKRPNSPNKPLVWTENWTGWFTHW 254 (649)
T ss_pred hhHHHHHHHHHHHHhhccceEEEEecCCCCceeEecCCCCCCccccccCCccchhhhccCCCCCCCceecccccchhhhh
Confidence 99999889999999999999999999999999999999999999999999999 9998 999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeeeeeeeccCCCCCCCCCCCcccccccCCCCCCcCCCCCChhHHHHHHHHHHHHH
Q 009890 262 GGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKL 341 (523)
Q Consensus 262 G~~~~~r~~~d~~~~~~~~~~~g~s~~nyYM~hGGTNfG~~~G~~~~~TSYDy~Api~E~G~~~~pKy~~lk~lh~~i~~ 341 (523)
|++.+.|++||+++.+++|+++|+|++|||||||||||||||| ++++|||||||||| |..|+|||+|+|.+|..++.
T Consensus 255 Gg~~~~R~~e~ia~~va~fls~ggs~vNyYM~hGGTNFGrt~G-~~~atsy~~dap~d--gl~~~pk~ghlk~~hts~d~ 331 (649)
T KOG0496|consen 255 GGPHPCRPVEDIALSVARFLSKGGSSVNYYMYHGGTNFGRTNG-PFIATSYDYDAPLD--GLLRQPKYGHLKPLHTSYDY 331 (649)
T ss_pred CCCCCCCCHHHHHHHHHHHHhcCccceEEEEeecccCCCcccC-cccccccccccccc--hhhcCCCccccccchhhhhh
Confidence 9999999999999999999999999999999999999999998 99999999999999 99999999999999999999
Q ss_pred hhhcccCCCCCCCCCCCCceEEEEEcCCCceEEEEEeCCCCeeEEEEECCeEEEecCeeEEEcCCCCeEEeecceecCcc
Q 009890 342 CEAALVATDPTYPSLGPNLEATVYKTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVT 421 (523)
Q Consensus 342 ~~~~L~~~~~~~~~lg~~~~~~v~~~~~~~~~~Fl~N~~~~~~~~V~f~~~~~~lp~~svsIlp~~~~v~~~Ta~v~~q~ 421 (523)
|+|.+..++++..++|+.+++ |++||.|++...+..|.|++.+|.+|+|||||||||++++||||++.+|
T Consensus 332 ~ep~lv~gd~~~~kyg~~~~~---------C~~Fl~n~~~~~~~~v~f~~~~y~~~~~slsilpdck~~~~nta~~~~~- 401 (649)
T KOG0496|consen 332 CEPALVAGDITTAKYGNLREA---------CAAFLSNNNGAPAAPVPFNKPKYRLPPWSLSILPDCKTVVYNTAKVMAQ- 401 (649)
T ss_pred cCccccccCcccccccchhhH---------HHHHHhcCCCCCCCccccCCCccccCceeEEechhhcchhhhccccccc-
Confidence 999999999998898887765 9999999999999999999999999999999999999999999988543
Q ss_pred cceeeeeccccccccCCCCCCcceeEeeccCCCC-CCCccccchhhhhhhccCCCceeeEEEeEEEecCCCccccCCCee
Q 009890 422 LVPSFSRQSLQVAADSSDAIGSGWSYINEPVGIS-KDDAFTKPGLLEQINTTADQSDYLWYSLSTNIKADEPLLEDGSKT 500 (523)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~W~~~~E~~~~~-~~~~~~~~~llEq~~~T~D~sDYLWY~T~v~i~~~~~~~~~~~~~ 500 (523)
|+.+.||++.. ...++. .+|||+|+|+|+|| +|+++|+
T Consensus 402 -----------------------~~~~~e~~~~~~~~~~~~--~ll~~~~~t~d~sd----~t~~~i~------------ 440 (649)
T KOG0496|consen 402 -----------------------WISFTEPIPSEAVGQSFG--GLLEQTNLTKDKSD----TTSLKIP------------ 440 (649)
T ss_pred -----------------------cccccCCCccccccCcce--EEEEEEeeccccCC----CceEeec------------
Confidence 77788998864 334555 89999999999999 8887765
Q ss_pred EEEEeecCcEEEEEEcCeeeecC
Q 009890 501 VLHVQSLGHALHAFINGKLVGEE 523 (523)
Q Consensus 501 ~L~v~s~gh~lh~FVNg~~~G~~ 523 (523)
| |.||++||||||+|+|+.
T Consensus 441 -l---s~g~~~hVfvNg~~~G~~ 459 (649)
T KOG0496|consen 441 -L---SLGHALHVFVNGEFAGSL 459 (649)
T ss_pred -c---cccceEEEEECCEEeeeE
Confidence 2 899999999999999973
|
|
| >PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-92 Score=725.01 Aligned_cols=297 Identities=41% Similarity=0.782 Sum_probs=233.0
Q ss_pred eEEECCEEEEEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEE
Q 009890 33 AVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAH 112 (523)
Q Consensus 33 ~l~idGk~~~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vi 112 (523)
+|+|||||++|+|||+||+|+||++|+|+|+||||+|+|||+|||+||+|||+||+|||+|++||++||++|+|+||+||
T Consensus 1 ~~~~~g~~~~~~~Ge~hy~r~p~~~W~~~l~k~ka~G~n~v~~yv~W~~he~~~g~~df~g~~dl~~f~~~a~~~gl~vi 80 (319)
T PF01301_consen 1 SFLIDGKPFFILSGEFHYFRIPPEYWRDRLQKMKAAGLNTVSTYVPWNLHEPEEGQFDFTGNRDLDRFLDLAQENGLYVI 80 (319)
T ss_dssp CEEETTEEE-EEEEEE-GGGS-GGGHHHHHHHHHHTT-SEEEEE--HHHHSSBTTB---SGGG-HHHHHHHHHHTT-EEE
T ss_pred CeEECCEEEEEEEeeeccccCChhHHHHHHHHHHhCCcceEEEeccccccCCCCCcccccchhhHHHHHHHHHHcCcEEE
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccC
Q 009890 113 LRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYG 192 (523)
Q Consensus 113 lr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g 192 (523)
|||||||||||++||+|.||.+++++++||+|++|++++++|+++|+++++ ++++++||||||+|||||||..
T Consensus 81 lrpGpyi~aE~~~gG~P~Wl~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~--~~~~~~GGpII~vQvENEyg~~----- 153 (319)
T PF01301_consen 81 LRPGPYICAEWDNGGLPAWLLRKPDIRLRTNDPPFLEAVERWYRALAKIIK--PLQYTNGGPIIMVQVENEYGSY----- 153 (319)
T ss_dssp EEEES---TTBGGGG--GGGGGSTTS-SSSS-HHHHHHHHHHHHHHHHHHG--GGBGGGTSSEEEEEESSSGGCT-----
T ss_pred ecccceecccccchhhhhhhhccccccccccchhHHHHHHHHHHHHHHHHH--hhhhcCCCceehhhhhhhhCCC-----
Confidence 999999999999999999999998999999999999999999999999999 7899999999999999999943
Q ss_pred cccHHHHHHHHHHHHhcCCC-cceEEccCC--------CCCCccccCCCCcccCCC--------CCCCCCCCceEeeecc
Q 009890 193 AAGKSYIKWAAGMALSLDTG-VPWVMCQQS--------DAPDPIINTCNGFYCDQF--------TPNSNNKPKMWTENWS 255 (523)
Q Consensus 193 ~~~~~y~~~l~~~~~~~g~~-vP~~~~~~~--------~~p~~vi~~~ng~~~~~~--------~~~~~~~P~~~tE~~~ 255 (523)
.++++||+.|++++++.+++ ++.++|+.. ++|+..+.+|+++.|... ...+|++|.|++|+|+
T Consensus 154 ~~~~~Y~~~l~~~~~~~g~~~~~~~t~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~P~~~~E~~~ 233 (319)
T PF01301_consen 154 GTDRAYMEALKDAYRDWGIDPVLLYTTDGPWGSWLPDGGLPGADIYATDNFPPGDNPDEYFGDQRSFQPNQPLMCTEFWG 233 (319)
T ss_dssp SS-HHHHHHHHHHHHHTT-SSSBEEEEESSSHCCHCCC-TTTGSCEEEEEETTTSSHHHHHHHHHHHHTTS--EEEEEES
T ss_pred cccHhHHHHHHHHHHHhhCccceeeccCCCcccccccCCCCcceEEeccccCCCchHHHHHhhhhhcCCCCCeEEEEecc
Confidence 37899999999999999998 666666542 244444566667777431 2456889999999999
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHhcCCeeeeeeeeccCCCCCCCCCCCcc----cccccCCCCCCcCCCCCChhHHH
Q 009890 256 GWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFI----STSYDYDAPLDEYGLIRQPKWGH 331 (523)
Q Consensus 256 Gwf~~wG~~~~~r~~~d~~~~~~~~~~~g~s~~nyYM~hGGTNfG~~~G~~~~----~TSYDy~Api~E~G~~~~pKy~~ 331 (523)
|||++||++.+.+++++++..+++++++| +++||||+|||||||+++|+... +|||||+|||+|+|+++ |||.+
T Consensus 234 Gwf~~WG~~~~~~~~~~~~~~l~~~l~~g-~~~nyYM~hGGTNfG~~~ga~~~~~p~~TSYDY~ApI~E~G~~~-~Ky~~ 311 (319)
T PF01301_consen 234 GWFDHWGGPHYTRPAEDVAADLARMLSKG-NSLNYYMFHGGTNFGFWAGANYYGQPDITSYDYDAPIDEYGQLT-PKYYE 311 (319)
T ss_dssp S---BTTS--HHHHHHHHHHHHHHHHHHC-SEEEEEECE--B--TT-B-EETTTEEB-SB--TT-SB-TTS-B--HHHHH
T ss_pred ccccccCCCCccCCHHHHHHHHHHHHHhh-cccceeeccccCCccccccCCCCCCCCcccCCcCCccCcCCCcC-HHHHH
Confidence 99999999999999999999999999999 55899999999999999876554 49999999999999995 99999
Q ss_pred HHHHHHH
Q 009890 332 LKDLHKA 338 (523)
Q Consensus 332 lk~lh~~ 338 (523)
||+||.+
T Consensus 312 lr~l~~~ 318 (319)
T PF01301_consen 312 LRRLHQK 318 (319)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 9999975
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B .... |
| >COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=326.25 Aligned_cols=294 Identities=22% Similarity=0.316 Sum_probs=204.8
Q ss_pred EEEecceEEECCEEEEEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEE-ccccCcCCCCCceeeccCcchHHHHHHHHH
Q 009890 27 VTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIET-YVFWNLHEPVRNQYNFEGRYDLVKFVKLVA 105 (523)
Q Consensus 27 vt~d~~~l~idGk~~~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~t-YvfWn~HEp~~G~ydF~G~~dL~~fl~la~ 105 (523)
|++++..+++||+|++++||++||+|+|++.|.++|+|||++|+|+|++ |+.||.|||++|+|||+ .+|++ |+++|+
T Consensus 1 ~~~~~~~~~~dg~~~~l~gG~y~p~~~p~~~w~ddl~~mk~~G~N~V~ig~faW~~~eP~eG~fdf~-~~D~~-~l~~a~ 78 (673)
T COG1874 1 VSYDGYSFIRDGRRILLYGGDYYPERWPRETWMDDLRKMKALGLNTVRIGYFAWNLHEPEEGKFDFT-WLDEI-FLERAY 78 (673)
T ss_pred CcccccceeeCCceeEEeccccChHHCCHHHHHHHHHHHHHhCCCeeEeeeEEeeccCccccccCcc-cchHH-HHHHHH
Confidence 4678999999999999999999999999999999999999999999999 99999999999999999 88888 999999
Q ss_pred HcCCEEEEecCc-eeccccCCCCCCccccCCCCeee---------ecCChhHHHHHHHHHHHHHHHHHhcccccccCCce
Q 009890 106 EAGLYAHLRIGP-YVCAEWNFGGFPLWLHFIPGIQF---------RTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPI 175 (523)
Q Consensus 106 ~~GL~Vilr~GP-yi~aEw~~GG~P~WL~~~p~i~~---------Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpI 175 (523)
+.||+||||||| ..|.+|..+++|.||...+.-.. -.+++-|++++++.+++|.+++ +++||+|
T Consensus 79 ~~Gl~vil~t~P~g~~P~Wl~~~~PeiL~~~~~~~~~~~g~r~~~~~~~~~Yr~~~~~i~~~irer~------~~~~~~v 152 (673)
T COG1874 79 KAGLYVILRTGPTGAPPAWLAKKYPEILAVDENGRVRSDGARENICPVSPVYREYLDRILQQIRERL------YGNGPAV 152 (673)
T ss_pred hcCceEEEecCCCCCCchHHhcCChhheEecCCCcccCCCcccccccccHHHHHHHHHHHHHHHHHH------hccCCce
Confidence 999999999999 99999999999999986554222 2446678888777555554443 4789999
Q ss_pred EeccccccccccccccCcccHHHHHHHHHHHHh-cCCCcceEEccCC-CCCC-ccccCCCC-----ccc--CCCCCCCCC
Q 009890 176 ILSQIENEYGNIDSAYGAAGKSYIKWAAGMALS-LDTGVPWVMCQQS-DAPD-PIINTCNG-----FYC--DQFTPNSNN 245 (523)
Q Consensus 176 I~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~-~g~~vP~~~~~~~-~~p~-~vi~~~ng-----~~~--~~~~~~~~~ 245 (523)
|+||++||||++.+.++.|...+..||++.+-. ...+-+|=+.--+ +..+ ..|.+.+. ..- -++......
T Consensus 153 ~~w~~dneY~~~~~~~~~~~~~f~~wLk~~yg~l~~ln~~w~t~~ws~t~~~~~~i~~p~~~~e~~~~~~~ld~~~f~~e 232 (673)
T COG1874 153 ITWQNDNEYGGHPCYCDYCQAAFRLWLKKGYGSLDNLNEAWGTSFWSHTYKDFDEIMSPNPFGELPLPGLYLDYRRFESE 232 (673)
T ss_pred eEEEccCccCCccccccccHHHHHHHHHhCcchHHhhhhhhhhhhcccccccHHhhcCCCCccccCCccchhhHhhhhhh
Confidence 999999999996666677889999999988732 1223343221100 0000 00111110 000 000000000
Q ss_pred C----CceEeeeccccc-cccCCCCCCCC-HHHHHHHHHHHHhcCCeeeeeeeeccCCCCC------CCCCCC---c---
Q 009890 246 K----PKMWTENWSGWF-LSFGGAVPYRP-VEDLAFAVARFFQRGGTFQNYYMYHGGTNFD------RTSGGP---F--- 307 (523)
Q Consensus 246 ~----P~~~tE~~~Gwf-~~wG~~~~~r~-~~d~~~~~~~~~~~g~s~~nyYM~hGGTNfG------~~~G~~---~--- 307 (523)
+ +....|.+-+|| ..|..+.-... .+.-++.++..+..... -||||+|+|++|+ +.+|+. +
T Consensus 233 ~~~~~~~~~~~~~~~~~P~~pvt~nl~~~~~~~~~~~~~~~ld~~sw-dny~~~~~~~~~~~~~h~l~r~~~~~~~~~~m 311 (673)
T COG1874 233 QILEFVREEGEAIKAYFPNRPVTPNLLAAFKKFDAYKWEKVLDFASW-DNYPAWHRGRDFTKFIHDLFRNGKQGQPFWLM 311 (673)
T ss_pred hhHHHHHHHHHHHHHhCCCCCCChhHhhhhhhcchHHHHHhcChhhh-hhhhhhccccchhhhhHHHHHhhccCCceeec
Confidence 1 222333344444 22222211111 12223444555555544 7999999999999 443432 2
Q ss_pred ----ccccccCCCCCCcCCCCCChhH
Q 009890 308 ----ISTSYDYDAPLDEYGLIRQPKW 329 (523)
Q Consensus 308 ----~~TSYDy~Api~E~G~~~~pKy 329 (523)
..++|++.+.+.+.|.+|-|++
T Consensus 312 e~~P~~vn~~~~n~~~~~G~~~l~s~ 337 (673)
T COG1874 312 EQLPSVVNWALYNKLKRPGALRLPSL 337 (673)
T ss_pred cCCcchhhhhhccCCCCCcccccccc
Confidence 5799999999999999654544
|
|
| >PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.9e-20 Score=195.67 Aligned_cols=265 Identities=19% Similarity=0.271 Sum_probs=162.1
Q ss_pred eeCCCCCccchHHHHHHHHhCCCCEEEE-ccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCC
Q 009890 48 IHYPRSTPEMWPDLIQKSKDGGLDVIET-YVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFG 126 (523)
Q Consensus 48 iHy~R~~~~~W~d~l~k~Ka~GlN~V~t-YvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~G 126 (523)
.++..++++.|+++|++||++|+|+|++ .+.|+..||+||+|||+ .|+++|++|+++||+|||++. .+
T Consensus 2 y~pe~~~~e~~~~d~~~m~~~G~n~vri~~~~W~~lEP~eG~ydF~---~lD~~l~~a~~~Gi~viL~~~--------~~ 70 (374)
T PF02449_consen 2 YYPEQWPEEEWEEDLRLMKEAGFNTVRIGEFSWSWLEPEEGQYDFS---WLDRVLDLAAKHGIKVILGTP--------TA 70 (374)
T ss_dssp --GGGS-CCHHHHHHHHHHHHT-SEEEE-CCEHHHH-SBTTB---H---HHHHHHHHHHCTT-EEEEEEC--------TT
T ss_pred CCcccCCHHHHHHHHHHHHHcCCCEEEEEEechhhccCCCCeeecH---HHHHHHHHHHhccCeEEEEec--------cc
Confidence 3456789999999999999999999996 67799999999999999 899999999999999999985 56
Q ss_pred CCCccccC-CCCee----------------eecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccccc
Q 009890 127 GFPLWLHF-IPGIQ----------------FRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDS 189 (523)
Q Consensus 127 G~P~WL~~-~p~i~----------------~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~ 189 (523)
..|.||.+ .|++. +..++|.|+++++++++++++++++++ .||+|||+||++...+
T Consensus 71 ~~P~Wl~~~~Pe~~~~~~~g~~~~~g~~~~~~~~~p~yr~~~~~~~~~l~~~y~~~p-------~vi~~~i~NE~~~~~~ 143 (374)
T PF02449_consen 71 APPAWLYDKYPEILPVDADGRRRGFGSRQHYCPNSPAYREYARRFIRALAERYGDHP-------AVIGWQIDNEPGYHRC 143 (374)
T ss_dssp TS-HHHHCCSGCCC-B-TTTSBEECCCSTT-HCCHHHHHHHHHHHHHHHHHHHTTTT-------TEEEEEECCSTTCTS-
T ss_pred ccccchhhhcccccccCCCCCcCccCCccccchhHHHHHHHHHHHHHHHHhhccccc-------eEEEEEeccccCcCcC
Confidence 78999965 56542 124578999999999999999988554 7999999999987533
Q ss_pred ccCcccHHHHHHHHHHHHhc-------C-------------CCcceEEccCC----------------------------
Q 009890 190 AYGAAGKSYIKWAAGMALSL-------D-------------TGVPWVMCQQS---------------------------- 221 (523)
Q Consensus 190 ~~g~~~~~y~~~l~~~~~~~-------g-------------~~vP~~~~~~~---------------------------- 221 (523)
....+.++|.+||++++... | +..|.-+....
T Consensus 144 ~~~~~~~~f~~wLk~kY~ti~~LN~aWgt~~ws~~~~~f~~v~~P~~~~~~~~~~~~~D~~rF~~~~~~~~~~~~~~~ir 223 (374)
T PF02449_consen 144 YSPACQAAFRQWLKEKYGTIEALNRAWGTAFWSQRYSSFDEVPPPRPTSSPENPAQWLDWYRFQSDRVAEFFRWQADIIR 223 (374)
T ss_dssp -SHHHHHHHHHHHHHHHSSHHHHHHHHTTTGGG---SSGGG---S-S-SS---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHhCCHHHHHHHHcCCcccCccCcHHhcCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33457789999999998641 1 11232222000
Q ss_pred -CCCCccccC------CCCc-------ccCC------------CC---------------CCCCCCCceEeeeccccccc
Q 009890 222 -DAPDPIINT------CNGF-------YCDQ------------FT---------------PNSNNKPKMWTENWSGWFLS 260 (523)
Q Consensus 222 -~~p~~vi~~------~ng~-------~~~~------------~~---------------~~~~~~P~~~tE~~~Gwf~~ 260 (523)
..|+..|-+ ..+. .+|- .. ....++|.+.+|..+| -..
T Consensus 224 ~~~p~~~vt~n~~~~~~~~~d~~~~a~~~D~~~~d~Y~~~~~~~~~~~~~~~a~~~dl~R~~~~~kpf~v~E~~~g-~~~ 302 (374)
T PF02449_consen 224 EYDPDHPVTTNFMGSWFNGIDYFKWAKYLDVVSWDSYPDGSFDFYDDDPYSLAFNHDLMRSLAKGKPFWVMEQQPG-PVN 302 (374)
T ss_dssp HHSTT-EEE-EE-TT---SS-HHHHGGGSSSEEEEE-HHHHHTTTT--TTHHHHHHHHHHHHTTT--EEEEEE--S---S
T ss_pred HhCCCceEEeCccccccCcCCHHHHHhhCCcceeccccCcccCCCCCCHHHHHHHHHHHHhhcCCCceEeecCCCC-CCC
Confidence 011100000 0010 0110 00 1136799999999988 556
Q ss_pred cCCCCCCCCHHHHHHHHHHHHhcCCeeeeeeeeccCCCCCCCCCCCcccccccCCCCCCcCCCCCChhHHHHHHHHHHHH
Q 009890 261 FGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIK 340 (523)
Q Consensus 261 wG~~~~~r~~~d~~~~~~~~~~~g~s~~nyYM~hGGTNfG~~~G~~~~~TSYDy~Api~E~G~~~~pKy~~lk~lh~~i~ 340 (523)
|+.......+..+....-.-++.|+..+.|+-+ ..--+|.-.. -.+-|+-+|...+++|.+++++.+-|+
T Consensus 303 ~~~~~~~~~pg~~~~~~~~~~A~Ga~~i~~~~w-r~~~~g~E~~---------~~g~~~~dg~~~~~~~~e~~~~~~~l~ 372 (374)
T PF02449_consen 303 WRPYNRPPRPGELRLWSWQAIAHGADGILFWQW-RQSRFGAEQF---------HGGLVDHDGREPTRRYREVAQLGRELK 372 (374)
T ss_dssp SSSS-----TTHHHHHHHHHHHTT-S-EEEC-S-B--SSSTTTT---------S--SB-TTS--B-HHHHHHHHHHHHHH
T ss_pred CccCCCCCCCCHHHHHHHHHHHHhCCeeEeeec-cCCCCCchhh---------hcccCCccCCCCCcHHHHHHHHHHHHh
Confidence 766555555667766666778999998888776 2223332110 135677888444789999999998887
Q ss_pred H
Q 009890 341 L 341 (523)
Q Consensus 341 ~ 341 (523)
.
T Consensus 373 ~ 373 (374)
T PF02449_consen 373 K 373 (374)
T ss_dssp T
T ss_pred c
Confidence 4
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A. |
| >PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.47 E-value=2e-12 Score=132.16 Aligned_cols=191 Identities=21% Similarity=0.293 Sum_probs=128.0
Q ss_pred EEEecceEEECCEEEEEEEEEeeCCC------CCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHH
Q 009890 27 VTYDHRAVVIGGKRRVLISGSIHYPR------STPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKF 100 (523)
Q Consensus 27 vt~d~~~l~idGk~~~l~sG~iHy~R------~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~f 100 (523)
|.+.++.|.|||||++|.+...|... .+++.|..+|++||++|+|+||+ .|-|.+ .+|
T Consensus 1 vev~~~~~~lNGk~~~l~Gv~~h~~~~~~g~a~~~~~~~~d~~l~k~~G~N~iR~-----~h~p~~-----------~~~ 64 (298)
T PF02836_consen 1 VEVKDGGFYLNGKPIFLRGVNRHQDYPGLGRAMPDEAMERDLELMKEMGFNAIRT-----HHYPPS-----------PRF 64 (298)
T ss_dssp EEEETTEEEETTEEE-EEEEEE-S-BTTTBT---HHHHHHHHHHHHHTT-SEEEE-----TTS--S-----------HHH
T ss_pred CEEECCEEEECCEEEEEEEEeeCcCcccccccCCHHHHHHHHHHHHhcCcceEEc-----ccccCc-----------HHH
Confidence 67889999999999999999999633 47899999999999999999999 677755 899
Q ss_pred HHHHHHcCCEEEEecCce-eccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecc
Q 009890 101 VKLVAEAGLYAHLRIGPY-VCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQ 179 (523)
Q Consensus 101 l~la~~~GL~Vilr~GPy-i~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~Q 179 (523)
+++|.+.||.|+..+ |. -++.|..-|. ......||.+.+.+.+-+++++++.+.|| .||+|-
T Consensus 65 ~~~cD~~GilV~~e~-~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~v~~~~NHP-------SIi~W~ 127 (298)
T PF02836_consen 65 YDLCDELGILVWQEI-PLEGHGSWQDFGN---------CNYDADDPEFRENAEQELREMVRRDRNHP-------SIIMWS 127 (298)
T ss_dssp HHHHHHHT-EEEEE--S-BSCTSSSSTSC---------TSCTTTSGGHHHHHHHHHHHHHHHHTT-T-------TEEEEE
T ss_pred HHHHhhcCCEEEEec-cccccCccccCCc---------cccCCCCHHHHHHHHHHHHHHHHcCcCcC-------chheee
Confidence 999999999999876 22 1222221110 12456789999988888888888888665 899999
Q ss_pred ccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEccCC--CCCCccc-cCCCCcccC-----CCC----C--CCCC
Q 009890 180 IENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQS--DAPDPII-NTCNGFYCD-----QFT----P--NSNN 245 (523)
Q Consensus 180 IENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~~~--~~p~~vi-~~~ng~~~~-----~~~----~--~~~~ 245 (523)
+-||- ....+++.|.+++++.+..-|+...... ...+.++ +...+.|-. .+. . ..++
T Consensus 128 ~gNE~---------~~~~~~~~l~~~~k~~DptRpv~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 198 (298)
T PF02836_consen 128 LGNES---------DYREFLKELYDLVKKLDPTRPVTYASNGWDPYVDDIIFDIYSGWYNGYGDPEDFEKYLEDWYKYPD 198 (298)
T ss_dssp EEESS---------HHHHHHHHHHHHHHHH-TTSEEEEETGTSGGSTSSCEECSETTTSSSCCHHHHHHHHHHHHHHHCT
T ss_pred cCccC---------ccccchhHHHHHHHhcCCCCceeecccccccccccccccccccccCCcccHHHHHHHHHhccccCC
Confidence 99998 2457888999999999988887655441 1111111 111111110 111 1 3578
Q ss_pred CCceEeeecccccc
Q 009890 246 KPKMWTENWSGWFL 259 (523)
Q Consensus 246 ~P~~~tE~~~Gwf~ 259 (523)
+|.+.+|+....+.
T Consensus 199 kP~i~sEyg~~~~~ 212 (298)
T PF02836_consen 199 KPIIISEYGADAYN 212 (298)
T ss_dssp S-EEEEEESEBBSS
T ss_pred CCeEehhccccccc
Confidence 99999999765443
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A .... |
| >PRK10150 beta-D-glucuronidase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.7e-10 Score=127.46 Aligned_cols=160 Identities=15% Similarity=0.068 Sum_probs=115.8
Q ss_pred eeEEEecceEEECCEEEEEEEEEeeCCC------CCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHH
Q 009890 25 ANVTYDHRAVVIGGKRRVLISGSIHYPR------STPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLV 98 (523)
Q Consensus 25 ~~vt~d~~~l~idGk~~~l~sG~iHy~R------~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~ 98 (523)
.+|++++..|+|||+|+++.+.+.|... .+++.|..+|+.||++|+|+||+ .|-|.+ .
T Consensus 276 R~i~~~~~~f~lNG~pv~lrG~~~h~~~~~~G~a~~~~~~~~d~~l~K~~G~N~vR~-----sh~p~~-----------~ 339 (604)
T PRK10150 276 RSVAVKGGQFLINGKPFYFKGFGKHEDADIRGKGLDEVLNVHDHNLMKWIGANSFRT-----SHYPYS-----------E 339 (604)
T ss_pred EEEEEeCCEEEECCEEEEEEeeeccCCCCccCCcCCHHHHHHHHHHHHHCCCCEEEe-----ccCCCC-----------H
Confidence 4688999999999999999999998532 46788999999999999999999 566654 7
Q ss_pred HHHHHHHHcCCEEEEecCceeccccCCCCCCcccc--------CCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccc
Q 009890 99 KFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH--------FIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYAS 170 (523)
Q Consensus 99 ~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~--------~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~ 170 (523)
+|+++|.+.||+|+..+. . -|+..|.. ..+.......+|.+.+..++-+++++++.+
T Consensus 340 ~~~~~cD~~GllV~~E~p-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mv~r~~------- 404 (604)
T PRK10150 340 EMLDLADRHGIVVIDETP-A-------VGLNLSFGAGLEAGNKPKETYSEEAVNGETQQAHLQAIRELIARDK------- 404 (604)
T ss_pred HHHHHHHhcCcEEEEecc-c-------ccccccccccccccccccccccccccchhHHHHHHHHHHHHHHhcc-------
Confidence 899999999999998762 1 11222211 111111123456666666666666666555
Q ss_pred cCCceEeccccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEcc
Q 009890 171 QGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQ 219 (523)
Q Consensus 171 ~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~ 219 (523)
|...||+|-|-||.... ......+++.|.+.+++++..-|+..+.
T Consensus 405 NHPSIi~Ws~gNE~~~~----~~~~~~~~~~l~~~~k~~DptR~vt~~~ 449 (604)
T PRK10150 405 NHPSVVMWSIANEPASR----EQGAREYFAPLAELTRKLDPTRPVTCVN 449 (604)
T ss_pred CCceEEEEeeccCCCcc----chhHHHHHHHHHHHHHhhCCCCceEEEe
Confidence 44599999999997531 1234578888999999999888877654
|
|
| >PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.7e-09 Score=127.57 Aligned_cols=260 Identities=17% Similarity=0.155 Sum_probs=153.4
Q ss_pred eeEEEecceEEECCEEEEEEEEEeeCCC------CCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHH
Q 009890 25 ANVTYDHRAVVIGGKRRVLISGSIHYPR------STPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLV 98 (523)
Q Consensus 25 ~~vt~d~~~l~idGk~~~l~sG~iHy~R------~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~ 98 (523)
.+|+++++.|+|||+|+++.+...|... .+++.|+.+|+.||++|+|+||+ .|-|.. .
T Consensus 318 R~iei~~~~f~lNGkpi~lrGvnrh~~~p~~G~a~~~e~~~~dl~lmK~~g~NavR~-----sHyP~~-----------~ 381 (1021)
T PRK10340 318 RDIKVRDGLFWINNRYVKLHGVNRHDNDHRKGRAVGMDRVEKDIQLMKQHNINSVRT-----AHYPND-----------P 381 (1021)
T ss_pred EEEEEECCEEEECCEEEEEEEeecCCCCcccCccCCHHHHHHHHHHHHHCCCCEEEe-----cCCCCC-----------H
Confidence 4578889999999999999999988422 37889999999999999999999 466654 7
Q ss_pred HHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEec
Q 009890 99 KFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILS 178 (523)
Q Consensus 99 ~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~ 178 (523)
+|+++|.+.||+|+-.. |..|.-|.. . .+...-+++|.+.++..+-+++++.+.+ +...||+|
T Consensus 382 ~fydlcDe~GllV~dE~-~~e~~g~~~-------~--~~~~~~~~~p~~~~~~~~~~~~mV~Rdr-------NHPSIi~W 444 (1021)
T PRK10340 382 RFYELCDIYGLFVMAET-DVESHGFAN-------V--GDISRITDDPQWEKVYVDRIVRHIHAQK-------NHPSIIIW 444 (1021)
T ss_pred HHHHHHHHCCCEEEECC-cccccCccc-------c--cccccccCCHHHHHHHHHHHHHHHHhCC-------CCCEEEEE
Confidence 89999999999999876 333222211 0 0111224667776544433444544444 55699999
Q ss_pred cccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEccCCCCC--CccccCCCCcc--cCCCCCCCCCCCceEeeec
Q 009890 179 QIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAP--DPIINTCNGFY--CDQFTPNSNNKPKMWTENW 254 (523)
Q Consensus 179 QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~~~~~p--~~vi~~~ng~~--~~~~~~~~~~~P~~~tE~~ 254 (523)
-+.||-+. | . .++.+.+.+++++-.-|+. +.+.... ..|+....+.+ +..+....+.+|.+.+|+-
T Consensus 445 slGNE~~~-----g---~-~~~~~~~~~k~~DptR~v~-~~~~~~~~~~Dv~~~~Y~~~~~~~~~~~~~~~kP~i~~Ey~ 514 (1021)
T PRK10340 445 SLGNESGY-----G---C-NIRAMYHAAKALDDTRLVH-YEEDRDAEVVDVISTMYTRVELMNEFGEYPHPKPRILCEYA 514 (1021)
T ss_pred ECccCccc-----c---H-HHHHHHHHHHHhCCCceEE-eCCCcCccccceeccccCCHHHHHHHHhCCCCCcEEEEchH
Confidence 99999753 2 2 2467788888888777754 3332111 11221111111 1122233457999999984
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHH--Hh--------------cCCeeeeeeeeccCCCCCCCCCCCcccccccCCCCC
Q 009890 255 SGWFLSFGGAVPYRPVEDLAFAVARF--FQ--------------RGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPL 318 (523)
Q Consensus 255 ~Gwf~~wG~~~~~r~~~d~~~~~~~~--~~--------------~g~s~~nyYM~hGGTNfG~~~G~~~~~TSYDy~Api 318 (523)
.+ .|. .+ ...++.-..+.+. ++ .+... .-|+.+||- ||-+.. -.++--+.-+
T Consensus 515 ha----mgn-~~-g~~~~yw~~~~~~p~l~GgfiW~~~D~~~~~~~~~G-~~~~~ygGd-~g~~p~----~~~f~~~Glv 582 (1021)
T PRK10340 515 HA----MGN-GP-GGLTEYQNVFYKHDCIQGHYVWEWCDHGIQAQDDNG-NVWYKYGGD-YGDYPN----NYNFCIDGLI 582 (1021)
T ss_pred hc----cCC-CC-CCHHHHHHHHHhCCceeEEeeeecCcccccccCCCC-CEEEEECCC-CCCCCC----CcCcccceeE
Confidence 21 121 00 0112222111110 00 00000 124445553 553311 1222234667
Q ss_pred CcCCCCCChhHHHHHHHHHHHH
Q 009890 319 DEYGLIRQPKWGHLKDLHKAIK 340 (523)
Q Consensus 319 ~E~G~~~~pKy~~lk~lh~~i~ 340 (523)
+.+|.+ .|.+..+|.+.+-++
T Consensus 583 ~~dr~p-~p~~~e~k~~~~pv~ 603 (1021)
T PRK10340 583 YPDQTP-GPGLKEYKQVIAPVK 603 (1021)
T ss_pred CCCCCC-ChhHHHHHHhcceEE
Confidence 888887 599999998887776
|
|
| >PRK09525 lacZ beta-D-galactosidase; Reviewed | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.6e-09 Score=125.94 Aligned_cols=150 Identities=19% Similarity=0.181 Sum_probs=109.0
Q ss_pred eeEEEecceEEECCEEEEEEEEEeeCC------CCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHH
Q 009890 25 ANVTYDHRAVVIGGKRRVLISGSIHYP------RSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLV 98 (523)
Q Consensus 25 ~~vt~d~~~l~idGk~~~l~sG~iHy~------R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~ 98 (523)
.+|++++..|+|||+|+++.+...|.. +.+++.++.+|+.||++|+|+||+ .|-|.. .
T Consensus 334 R~iei~~~~f~LNGkpi~lrGvn~h~~~p~~G~a~t~e~~~~di~lmK~~g~NaVR~-----sHyP~~-----------p 397 (1027)
T PRK09525 334 RKVEIENGLLKLNGKPLLIRGVNRHEHHPEHGQVMDEETMVQDILLMKQHNFNAVRC-----SHYPNH-----------P 397 (1027)
T ss_pred EEEEEECCEEEECCEEEEEEEeEccccCcccCccCCHHHHHHHHHHHHHCCCCEEEe-----cCCCCC-----------H
Confidence 457888889999999999999999842 358899999999999999999999 466544 7
Q ss_pred HHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEec
Q 009890 99 KFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILS 178 (523)
Q Consensus 99 ~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~ 178 (523)
+|+++|.+.||+|+-... . | ..|-.|.. .-.+||.|++++.+=+++++.+.+ +...||+|
T Consensus 398 ~fydlcDe~GilV~dE~~-~---e-~hg~~~~~--------~~~~dp~~~~~~~~~~~~mV~Rdr-------NHPSIi~W 457 (1027)
T PRK09525 398 LWYELCDRYGLYVVDEAN-I---E-THGMVPMN--------RLSDDPRWLPAMSERVTRMVQRDR-------NHPSIIIW 457 (1027)
T ss_pred HHHHHHHHcCCEEEEecC-c---c-ccCCcccc--------CCCCCHHHHHHHHHHHHHHHHhCC-------CCCEEEEE
Confidence 899999999999998762 2 1 11111210 013577777665554555555555 45699999
Q ss_pred cccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEcc
Q 009890 179 QIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQ 219 (523)
Q Consensus 179 QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~ 219 (523)
-+.||-+. + .....+.+.+++++-.-|+....
T Consensus 458 SlgNE~~~-----g----~~~~~l~~~~k~~DptRpV~y~~ 489 (1027)
T PRK09525 458 SLGNESGH-----G----ANHDALYRWIKSNDPSRPVQYEG 489 (1027)
T ss_pred eCccCCCc-----C----hhHHHHHHHHHhhCCCCcEEECC
Confidence 99999753 2 22456777788888888876653
|
|
| >PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.04 E-value=3.1e-09 Score=105.67 Aligned_cols=161 Identities=17% Similarity=0.198 Sum_probs=112.4
Q ss_pred CCEEEEEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEccccCcCC-CCCce-eeccCcchHHHHHHHHHHcCCEEEEe
Q 009890 37 GGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHE-PVRNQ-YNFEGRYDLVKFVKLVAEAGLYAHLR 114 (523)
Q Consensus 37 dGk~~~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HE-p~~G~-ydF~G~~dL~~fl~la~~~GL~Vilr 114 (523)
+|+++.+.+-+.|... +..-++.+++||+.|+|+||+.+.|...+ |.|+. ++=+.-..|+++|+.|+++||+|||.
T Consensus 4 ~G~~v~~~G~n~~w~~--~~~~~~~~~~~~~~G~n~VRi~v~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gi~vild 81 (281)
T PF00150_consen 4 NGKPVNWRGFNTHWYN--PSITEADFDQLKALGFNTVRIPVGWEAYQEPNPGYNYDETYLARLDRIVDAAQAYGIYVILD 81 (281)
T ss_dssp TSEBEEEEEEEETTSG--GGSHHHHHHHHHHTTESEEEEEEESTSTSTTSTTTSBTHHHHHHHHHHHHHHHHTT-EEEEE
T ss_pred CCCeEEeeeeecccCC--CCCHHHHHHHHHHCCCCEEEeCCCHHHhcCCCCCccccHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 7999999999999321 22778999999999999999999995555 67664 66666678999999999999999987
Q ss_pred cCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccc--cC
Q 009890 115 IGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSA--YG 192 (523)
Q Consensus 115 ~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~--~g 192 (523)
+= + .|.|...... -...+...+...++++.|++++|+ ..+|++++|=||....... +.
T Consensus 82 ~h----~------~~~w~~~~~~---~~~~~~~~~~~~~~~~~la~~y~~-------~~~v~~~el~NEP~~~~~~~~w~ 141 (281)
T PF00150_consen 82 LH----N------APGWANGGDG---YGNNDTAQAWFKSFWRALAKRYKD-------NPPVVGWELWNEPNGGNDDANWN 141 (281)
T ss_dssp EE----E------STTCSSSTST---TTTHHHHHHHHHHHHHHHHHHHTT-------TTTTEEEESSSSGCSTTSTTTTS
T ss_pred ec----c------Cccccccccc---cccchhhHHHHHhhhhhhccccCC-------CCcEEEEEecCCccccCCccccc
Confidence 62 1 2667433211 112333445555667777777763 3479999999999864321 10
Q ss_pred ----cccHHHHHHHHHHHHhcCCCcceEEcc
Q 009890 193 ----AAGKSYIKWAAGMALSLDTGVPWVMCQ 219 (523)
Q Consensus 193 ----~~~~~y~~~l~~~~~~~g~~vP~~~~~ 219 (523)
..-.++++.+.+..|+.+.+.+++...
T Consensus 142 ~~~~~~~~~~~~~~~~~Ir~~~~~~~i~~~~ 172 (281)
T PF00150_consen 142 AQNPADWQDWYQRAIDAIRAADPNHLIIVGG 172 (281)
T ss_dssp HHHTHHHHHHHHHHHHHHHHTTSSSEEEEEE
T ss_pred cccchhhhhHHHHHHHHHHhcCCcceeecCC
Confidence 112456677777788888887766544
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A .... |
| >COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.95 E-value=9.4e-09 Score=117.89 Aligned_cols=120 Identities=20% Similarity=0.273 Sum_probs=99.1
Q ss_pred eeEEEecceEEECCEEEEEEEEEeeCCC-----C-CccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHH
Q 009890 25 ANVTYDHRAVVIGGKRRVLISGSIHYPR-----S-TPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLV 98 (523)
Q Consensus 25 ~~vt~d~~~l~idGk~~~l~sG~iHy~R-----~-~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~ 98 (523)
.+|++++..|.|||||+++-+..-|.+- . ..+.-.++|++||++|+|+|||. |-|.. .
T Consensus 284 R~iei~~~~~~iNGkpvf~kGvnrHe~~~~~G~~~~~~~~~~dl~lmk~~n~N~vRts-----HyP~~-----------~ 347 (808)
T COG3250 284 RTVEIKDGLLLINGKPVFIRGVNRHEDDPILGRVTDEDAMERDLKLMKEANMNSVRTS-----HYPNS-----------E 347 (808)
T ss_pred EEEEEECCeEEECCeEEEEeeeecccCCCccccccCHHHHHHHHHHHHHcCCCEEEec-----CCCCC-----------H
Confidence 5689999999999999999999999633 3 34448899999999999999994 88776 8
Q ss_pred HHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEec
Q 009890 99 KFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILS 178 (523)
Q Consensus 99 ~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~ 178 (523)
.|+++|.+.||+|+-.+ + .||.. .| +++.|++.+..=+++++++.|.|| .||+|
T Consensus 348 ~~ydLcDelGllV~~Ea-~---~~~~~--~~-------------~~~~~~k~~~~~i~~mver~knHP-------SIiiW 401 (808)
T COG3250 348 EFYDLCDELGLLVIDEA-M---IETHG--MP-------------DDPEWRKEVSEEVRRMVERDRNHP-------SIIIW 401 (808)
T ss_pred HHHHHHHHhCcEEEEec-c---hhhcC--CC-------------CCcchhHHHHHHHHHHHHhccCCC-------cEEEE
Confidence 99999999999999886 2 22221 11 788899998888888888888665 89999
Q ss_pred cccccccc
Q 009890 179 QIENEYGN 186 (523)
Q Consensus 179 QIENEyg~ 186 (523)
-+.||-|.
T Consensus 402 s~gNE~~~ 409 (808)
T COG3250 402 SLGNESGH 409 (808)
T ss_pred eccccccC
Confidence 99999874
|
|
| >smart00633 Glyco_10 Glycosyl hydrolase family 10 | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.1e-06 Score=88.45 Aligned_cols=117 Identities=25% Similarity=0.392 Sum_probs=89.5
Q ss_pred cCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHH
Q 009890 79 WNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKI 158 (523)
Q Consensus 79 Wn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i 158 (523)
|...||+||+|||+ .++++++.|+++||.| |..+.+ |.. ..|.|+...+ .+..++++++|++.+
T Consensus 3 W~~~ep~~G~~n~~---~~D~~~~~a~~~gi~v--~gH~l~---W~~-~~P~W~~~~~-------~~~~~~~~~~~i~~v 66 (254)
T smart00633 3 WDSTEPSRGQFNFS---GADAIVNFAKENGIKV--RGHTLV---WHS-QTPDWVFNLS-------KETLLARLENHIKTV 66 (254)
T ss_pred cccccCCCCccChH---HHHHHHHHHHHCCCEE--EEEEEe---ecc-cCCHhhhcCC-------HHHHHHHHHHHHHHH
Confidence 88999999999999 8999999999999998 333222 433 6899987533 345677788888888
Q ss_pred HHHHHhcccccccCCceEecccccccccccc------cc-CcccHHHHHHHHHHHHhcCCCcceEEccC
Q 009890 159 VDMMKQEKLYASQGGPIILSQIENEYGNIDS------AY-GAAGKSYIKWAAGMALSLDTGVPWVMCQQ 220 (523)
Q Consensus 159 ~~~ik~~~l~~~~gGpII~~QIENEyg~~~~------~~-g~~~~~y~~~l~~~~~~~g~~vP~~~~~~ 220 (523)
+.+++ |.|..|+|=||.-+... .+ ...|.+|+...-+.|++.+.++.++.++-
T Consensus 67 ~~ry~---------g~i~~wdV~NE~~~~~~~~~~~~~w~~~~G~~~i~~af~~ar~~~P~a~l~~Ndy 126 (254)
T smart00633 67 VGRYK---------GKIYAWDVVNEALHDNGSGLRRSVWYQILGEDYIEKAFRYAREADPDAKLFYNDY 126 (254)
T ss_pred HHHhC---------CcceEEEEeeecccCCCcccccchHHHhcChHHHHHHHHHHHHhCCCCEEEEecc
Confidence 87776 46889999999644210 11 22456899999999999999999998863
|
|
| >PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane | Back alignment and domain information |
|---|
Probab=98.32 E-value=6.7e-06 Score=84.78 Aligned_cols=156 Identities=15% Similarity=0.144 Sum_probs=90.3
Q ss_pred CCeeEEEecceEE--ECCEEEEEEEEEeeCCC-----------CCccchHHHHHHHHhCCCCEEEEccccCcCCCCCcee
Q 009890 23 FGANVTYDHRAVV--IGGKRRVLISGSIHYPR-----------STPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQY 89 (523)
Q Consensus 23 ~~~~vt~d~~~l~--idGk~~~l~sG~iHy~R-----------~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~y 89 (523)
.-..|+..++.|. .+|++|++.+-..-+.. ..++.|..++..||++|+|+||+|- ..|.
T Consensus 7 ~~~pI~ikG~kff~~~~g~~F~ikGVaYQp~~~~~~~~~~DPLad~~~C~rDi~~l~~LgiNtIRVY~----vdp~---- 78 (314)
T PF03198_consen 7 AVPPIEIKGNKFFYSKNGTRFFIKGVAYQPGGSSEPSNYIDPLADPEACKRDIPLLKELGINTIRVYS----VDPS---- 78 (314)
T ss_dssp TS--EEEETTEEEETTT--B--EEEEE----------SS--GGG-HHHHHHHHHHHHHHT-SEEEES-------TT----
T ss_pred cCCCEEEECCEeEECCCCCEEEEeeEEcccCCCCCCccCcCcccCHHHHHHhHHHHHHcCCCEEEEEE----eCCC----
Confidence 4467999999999 79999999876665422 2567899999999999999999984 2332
Q ss_pred eccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCCh--hHHHHHHHHHHHHHHHHHhccc
Q 009890 90 NFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNE--PFKAEMQRFTAKIVDMMKQEKL 167 (523)
Q Consensus 90 dF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~--~fl~~~~~~~~~i~~~ik~~~l 167 (523)
.|-+.++++.+++|+|||+-.+. | +..+..++| .|-...-.-+.++++.+++++
T Consensus 79 -----~nHd~CM~~~~~aGIYvi~Dl~~-----------p-------~~sI~r~~P~~sw~~~l~~~~~~vid~fa~Y~- 134 (314)
T PF03198_consen 79 -----KNHDECMSAFADAGIYVILDLNT-----------P-------NGSINRSDPAPSWNTDLLDRYFAVIDAFAKYD- 134 (314)
T ss_dssp -----S--HHHHHHHHHTT-EEEEES-B-----------T-------TBS--TTS------HHHHHHHHHHHHHHTT-T-
T ss_pred -----CCHHHHHHHHHhCCCEEEEecCC-----------C-------CccccCCCCcCCCCHHHHHHHHHHHHHhccCC-
Confidence 37899999999999999998852 2 222333445 444443344556677788554
Q ss_pred ccccCCceEecccccccccccc--ccCcccHHHHHHHHHHHHhcCC-CcceE
Q 009890 168 YASQGGPIILSQIENEYGNIDS--AYGAAGKSYIKWAAGMALSLDT-GVPWV 216 (523)
Q Consensus 168 ~~~~gGpII~~QIENEyg~~~~--~~g~~~~~y~~~l~~~~~~~g~-~vP~~ 216 (523)
+++++=+.||--+-.. .-.+.-|+.++.+|+-.++.+. .+|+=
T Consensus 135 ------N~LgFf~GNEVin~~~~t~aap~vKAavRD~K~Yi~~~~~R~IPVG 180 (314)
T PF03198_consen 135 ------NTLGFFAGNEVINDASNTNAAPYVKAAVRDMKAYIKSKGYRSIPVG 180 (314)
T ss_dssp ------TEEEEEEEESSS-STT-GGGHHHHHHHHHHHHHHHHHSSS----EE
T ss_pred ------ceEEEEecceeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcee
Confidence 8999999999864321 1112345556666666666666 45653
|
It includes Candida albicans (Yeast) pH-regulated protein, which is required for apical growth and plays a role in morphogenesis and Saccharomyces cerevisiae glycolipid anchored surface protein.; PDB: 2W61_A 2W62_A 2W63_A. |
| >TIGR03356 BGL beta-galactosidase | Back alignment and domain information |
|---|
Probab=98.00 E-value=1.4e-05 Score=86.48 Aligned_cols=97 Identities=16% Similarity=0.165 Sum_probs=81.1
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++|+.||++|+|++|+-|.|...+|. +|++|.+|-...+++|+.|.++||.+|+-. -.-.+|.||.+
T Consensus 54 ~~y~eDi~l~~~~G~~~~R~si~Wsri~p~g~~~~n~~~~~~y~~~i~~l~~~gi~pivtL--------~Hfd~P~~l~~ 125 (427)
T TIGR03356 54 HRYEEDVALMKELGVDAYRFSIAWPRIFPEGTGPVNPKGLDFYDRLVDELLEAGIEPFVTL--------YHWDLPQALED 125 (427)
T ss_pred HhHHHHHHHHHHcCCCeEEcccchhhcccCCCCCcCHHHHHHHHHHHHHHHHcCCeeEEee--------ccCCccHHHHh
Confidence 568999999999999999999999999999 799999888899999999999999988766 23468999986
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHh
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQ 164 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~ 164 (523)
..|. .++...++..+|.+.+++++++
T Consensus 126 ~gGw----~~~~~~~~f~~ya~~~~~~~~d 151 (427)
T TIGR03356 126 RGGW----LNRDTAEWFAEYAAVVAERLGD 151 (427)
T ss_pred cCCC----CChHHHHHHHHHHHHHHHHhCC
Confidence 6553 3466667777777777777763
|
|
| >PLN02705 beta-amylase | Back alignment and domain information |
|---|
Probab=97.89 E-value=3.2e-05 Score=85.19 Aligned_cols=115 Identities=20% Similarity=0.292 Sum_probs=80.5
Q ss_pred ccchHHHHHHHHhCCCCEEEEccccCcCCC-CCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCC-----CC
Q 009890 55 PEMWPDLIQKSKDGGLDVIETYVFWNLHEP-VRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFG-----GF 128 (523)
Q Consensus 55 ~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp-~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~G-----G~ 128 (523)
++.-...|+++|++|++.|.+-|.|...|. .|++|||+| -.+++++|+++||++.+-.-=--|+- +-| -|
T Consensus 267 ~~al~a~L~aLK~aGVdGVmvDVWWGiVE~~~P~~YdWsg---Y~~L~~mvr~~GLKlqvVmSFHqCGG-NVGD~~~IPL 342 (681)
T PLN02705 267 PEGVRQELSHMKSLNVDGVVVDCWWGIVEGWNPQKYVWSG---YRELFNIIREFKLKLQVVMAFHEYGG-NASGNVMISL 342 (681)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeeeeEeecCCCCcCCcHH---HHHHHHHHHHcCCeEEEEEEeeccCC-CCCCcccccC
Confidence 344678899999999999999999999998 699999996 56779999999999654432233443 223 38
Q ss_pred CccccC----CCCeeee------------------------cCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccc
Q 009890 129 PLWLHF----IPGIQFR------------------------TDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQI 180 (523)
Q Consensus 129 P~WL~~----~p~i~~R------------------------t~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QI 180 (523)
|.|+.+ .|+|.+. |--+.|.+.|+.|-..+.+.|. +|-|.-+||
T Consensus 343 P~WV~e~g~~nPDifftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~DFM~SFr~~F~~fl~--------~g~I~eI~V 414 (681)
T PLN02705 343 PQWVLEIGKDNQDIFFTDREGRRNTECLSWSIDKERVLKGRTGIEVYFDFMRSFRSEFDDLFV--------EGLITAVEI 414 (681)
T ss_pred CHHHHHhcccCCCceeecCCCCcccceeeeecCcccccCCCCHHHHHHHHHHHHHHHHHHhcc--------CCceeEEEe
Confidence 999975 5676331 1113455656555555544432 467888887
Q ss_pred c
Q 009890 181 E 181 (523)
Q Consensus 181 E 181 (523)
.
T Consensus 415 G 415 (681)
T PLN02705 415 G 415 (681)
T ss_pred c
Confidence 3
|
|
| >PF13364 BetaGal_dom4_5: Beta-galactosidase jelly roll domain; PDB: 1TG7_A 1XC6_A 3OGS_A 3OGV_A 3OGR_A 3OG2_A | Back alignment and domain information |
|---|
Probab=97.89 E-value=1.6e-05 Score=70.59 Aligned_cols=54 Identities=19% Similarity=0.353 Sum_probs=41.8
Q ss_pred chhhhhhhccCCCceeeEEEeEEEecCCCccccCCCeeE-EEEe-ecCcEEEEEEcCeeeec
Q 009890 463 PGLLEQINTTADQSDYLWYSLSTNIKADEPLLEDGSKTV-LHVQ-SLGHALHAFINGKLVGE 522 (523)
Q Consensus 463 ~~llEq~~~T~D~sDYLWY~T~v~i~~~~~~~~~~~~~~-L~v~-s~gh~lh~FVNg~~~G~ 522 (523)
..+++..+.+++.++|+||+|+|+.+..+. .-. |.+. +.+|.++|||||+++|+
T Consensus 21 ~~~~l~~~~~g~~~g~~~Yrg~F~~~~~~~------~~~~l~~~~g~~~~~~vwVNG~~~G~ 76 (111)
T PF13364_consen 21 TGPVLYASDYGFHAGYLWYRGTFTGTGQDT------SLTPLNIQGGNAFRASVWVNGWFLGS 76 (111)
T ss_dssp SSSSTCCGCGTSSSCEEEEEEEEETTTEEE------EEE-EEECSSTTEEEEEEETTEEEEE
T ss_pred CCceeccCccccCCCCEEEEEEEeCCCcce------eEEEEeccCCCceEEEEEECCEEeee
Confidence 345788899999999999999997443331 123 4454 77999999999999996
|
|
| >PLN02905 beta-amylase | Back alignment and domain information |
|---|
Probab=97.88 E-value=4.1e-05 Score=84.58 Aligned_cols=114 Identities=21% Similarity=0.407 Sum_probs=81.1
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCC-CCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCC-----CCC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEP-VRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFG-----GFP 129 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp-~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~G-----G~P 129 (523)
+.-...|+++|++|++.|.+-|.|...|. .|++|||+| -.+++++|+++||++.+-.-=--|+- +-| -||
T Consensus 286 ~al~a~L~aLK~aGVdGVmvDVWWGiVE~~gP~~YdWsg---Y~~L~~mvr~~GLKlqvVMSFHqCGG-NVGD~~~IPLP 361 (702)
T PLN02905 286 DGLLKQLRILKSINVDGVKVDCWWGIVEAHAPQEYNWNG---YKRLFQMVRELKLKLQVVMSFHECGG-NVGDDVCIPLP 361 (702)
T ss_pred HHHHHHHHHHHHcCCCEEEEeeeeeeeecCCCCcCCcHH---HHHHHHHHHHcCCeEEEEEEecccCC-CCCCcccccCC
Confidence 34567899999999999999999999998 699999996 56779999999999754432233433 222 389
Q ss_pred ccccC----CCCeeee------------------------cCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccc
Q 009890 130 LWLHF----IPGIQFR------------------------TDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIE 181 (523)
Q Consensus 130 ~WL~~----~p~i~~R------------------------t~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIE 181 (523)
.|+.+ .|+|.+. |--+.|.+.|+.|-..+.+.|. +|-|.-+||.
T Consensus 362 ~WV~e~g~~nPDifftDrsG~rn~EyLSlg~D~~pvl~GRTplq~Y~DFM~SFr~~F~~fl~--------~g~I~eI~VG 433 (702)
T PLN02905 362 HWVAEIGRSNPDIFFTDREGRRNPECLSWGIDKERILRGRTALEVYFDYMRSFRVEFDEFFE--------DGVISMVEVG 433 (702)
T ss_pred HHHHHhhhcCCCceEecCCCCccCceeeeecccccccCCCCHHHHHHHHHHHHHHHHHHHhc--------CCceEEEEec
Confidence 99975 5776331 1123466666666666555443 4678888873
|
|
| >PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.0003 Score=72.45 Aligned_cols=224 Identities=21% Similarity=0.278 Sum_probs=111.7
Q ss_pred cceEE-ECCEEEEEEEEEeeC---CCCCccchHHHHHHHHhCCCCEEEEccc--cCcC--------CCC----Cceeecc
Q 009890 31 HRAVV-IGGKRRVLISGSIHY---PRSTPEMWPDLIQKSKDGGLDVIETYVF--WNLH--------EPV----RNQYNFE 92 (523)
Q Consensus 31 ~~~l~-idGk~~~l~sG~iHy---~R~~~~~W~d~l~k~Ka~GlN~V~tYvf--Wn~H--------Ep~----~G~ydF~ 92 (523)
++.|. -||+||+.++ .-.+ .|...++|+.-|+..|+.|||+|++=++ |..+ .|- ++++||+
T Consensus 2 ~r~f~~~dG~Pff~lg-dT~W~~~~~~~~~e~~~yL~~r~~qgFN~iq~~~l~~~~~~~~~n~~~~~~~~~~~~~~~d~~ 80 (289)
T PF13204_consen 2 GRHFVYADGTPFFWLG-DTAWSLFHRLTREEWEQYLDTRKEQGFNVIQMNVLPQWDGYNTPNRYGFAPFPDEDPGQFDFT 80 (289)
T ss_dssp SSSEEETTS-B--EEE-EE-TTHHHH--HHHHHHHHHHHHHTT--EEEEES-SSSS-B----TTS-BS-SSTT------T
T ss_pred CceEecCCCCEEeehh-HHHHHHhhCCCHHHHHHHHHHHHHCCCCEEEEEeCCCcccccccccCCCcCCCCCCccccCCC
Confidence 46676 7999999998 4443 3568899999999999999999999776 4422 121 2237776
Q ss_pred Cc-----chHHHHHHHHHHcCCEEEEec---CceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHh
Q 009890 93 GR-----YDLVKFVKLVAEAGLYAHLRI---GPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQ 164 (523)
Q Consensus 93 G~-----~dL~~fl~la~~~GL~Vilr~---GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~ 164 (523)
.- ..|++.|+.+.+.||.+.|-| +||+-+-|-.| | ..+ =.+.+++|.+.|+++++.
T Consensus 81 ~~N~~YF~~~d~~i~~a~~~Gi~~~lv~~wg~~~~~~~Wg~~--~------~~m--------~~e~~~~Y~~yv~~Ry~~ 144 (289)
T PF13204_consen 81 RPNPAYFDHLDRRIEKANELGIEAALVPFWGCPYVPGTWGFG--P------NIM--------PPENAERYGRYVVARYGA 144 (289)
T ss_dssp T----HHHHHHHHHHHHHHTT-EEEEESS-HHHHH---------T------TSS---------HHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEEEECCcccccccccc--c------cCC--------CHHHHHHHHHHHHHHHhc
Confidence 53 469999999999999986543 23333334332 1 111 136788999999999996
Q ss_pred cccccccCCceEeccccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEcc--CC-CCCC-----cccc---CCCC
Q 009890 165 EKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQ--QS-DAPD-----PIIN---TCNG 233 (523)
Q Consensus 165 ~~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~--~~-~~p~-----~vi~---~~ng 233 (523)
.+ +|| |=|-||+ . ......++.+.+++..++.+-.- +++.- +. ..++ +=++ ...|
T Consensus 145 ~~-------Nvi-W~l~gd~-~----~~~~~~~~w~~~~~~i~~~dp~~-L~T~H~~~~~~~~~~~~~~~Wldf~~~Qsg 210 (289)
T PF13204_consen 145 YP-------NVI-WILGGDY-F----DTEKTRADWDAMARGIKENDPYQ-LITIHPCGRTSSPDWFHDEPWLDFNMYQSG 210 (289)
T ss_dssp -S-------SEE-EEEESSS-------TTSSHHHHHHHHHHHHHH--SS--EEEEE-BTEBTHHHHTT-TT--SEEEB--
T ss_pred CC-------CCE-EEecCcc-C----CCCcCHHHHHHHHHHHHhhCCCC-cEEEeCCCCCCcchhhcCCCcceEEEeecC
Confidence 53 466 7799999 1 12356677777777777765433 33222 11 1111 1011 1112
Q ss_pred cccC----------CCC-CCCCCCCceEeee-ccccccccCCCCCCCCHHHHHHHHHHHHhcCC
Q 009890 234 FYCD----------QFT-PNSNNKPKMWTEN-WSGWFLSFGGAVPYRPVEDLAFAVARFFQRGG 285 (523)
Q Consensus 234 ~~~~----------~~~-~~~~~~P~~~tE~-~~Gwf~~wG~~~~~r~~~d~~~~~~~~~~~g~ 285 (523)
-... ... ...|.||.+..|- +.|--..+.+.....+++|+-...=.-+-+|+
T Consensus 211 h~~~~~~~~~~~~~~~~~~~~p~KPvin~Ep~YEg~~~~~~~~~~~~~~~dvrr~aw~svlaGa 274 (289)
T PF13204_consen 211 HNRYDQDNWYYLPEEFDYRRKPVKPVINGEPCYEGIPYSRWGYNGRFSAEDVRRRAWWSVLAGA 274 (289)
T ss_dssp S--TT--THHHH--HHHHTSSS---EEESS---BT-BTTSS-TS-B--HHHHHHHHHHHHHCT-
T ss_pred CCcccchHHHHHhhhhhhhhCCCCCEEcCcccccCCCCCcCcccCCCCHHHHHHHHHHHHhcCC
Confidence 2110 111 4578999999996 34433322223344577887665444455565
|
|
| >PLN02801 beta-amylase | Back alignment and domain information |
|---|
Probab=97.81 E-value=5.2e-05 Score=82.34 Aligned_cols=81 Identities=25% Similarity=0.458 Sum_probs=62.9
Q ss_pred CccchHHHHHHHHhCCCCEEEEccccCcCCC-CCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCC-----C
Q 009890 54 TPEMWPDLIQKSKDGGLDVIETYVFWNLHEP-VRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFG-----G 127 (523)
Q Consensus 54 ~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp-~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~G-----G 127 (523)
.++.-+..|+++|++|++.|.+.|-|...|. .|++|||+| -.+++++|+++||++.+-.-=--|+- +-| -
T Consensus 35 ~~~~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsg---Y~~l~~mvr~~GLKlq~vmSFHqCGG-NVGD~~~Ip 110 (517)
T PLN02801 35 DEEGLEKQLKRLKEAGVDGVMVDVWWGIVESKGPKQYDWSA---YRSLFELVQSFGLKIQAIMSFHQCGG-NVGDAVNIP 110 (517)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeeeeeeccCCCCccCcHH---HHHHHHHHHHcCCeEEEEEEecccCC-CCCCccccc
Confidence 3555788999999999999999999999998 599999996 56779999999999754332233433 222 3
Q ss_pred CCccccC----CCCe
Q 009890 128 FPLWLHF----IPGI 138 (523)
Q Consensus 128 ~P~WL~~----~p~i 138 (523)
+|.|+.+ +|+|
T Consensus 111 LP~WV~~~g~~~pDi 125 (517)
T PLN02801 111 IPQWVRDVGDSDPDI 125 (517)
T ss_pred CCHHHHHhhccCCCc
Confidence 8999974 5776
|
|
| >PLN02161 beta-amylase | Back alignment and domain information |
|---|
Probab=97.80 E-value=7.2e-05 Score=81.22 Aligned_cols=82 Identities=22% Similarity=0.387 Sum_probs=62.7
Q ss_pred ccchHHHHHHHHhCCCCEEEEccccCcCCC-CCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCC-----CC
Q 009890 55 PEMWPDLIQKSKDGGLDVIETYVFWNLHEP-VRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFG-----GF 128 (523)
Q Consensus 55 ~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp-~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~G-----G~ 128 (523)
++.-...|+++|++|++.|.+-|-|...|. .|++|||+| -.+++++++++||++.+-.-=--|+- +-| -|
T Consensus 116 ~~al~~~L~~LK~~GVdGVmvDVWWGiVE~~~p~~YdWsg---Y~~l~~mvr~~GLKlq~vmSFHqCGG-NvGd~~~IpL 191 (531)
T PLN02161 116 LKALTVSLKALKLAGVHGIAVEVWWGIVERFSPLEFKWSL---YEELFRLISEAGLKLHVALCFHSNMH-LFGGKGGISL 191 (531)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeeeeeeecCCCCcCCcHH---HHHHHHHHHHcCCeEEEEEEecccCC-CCCCccCccC
Confidence 334567899999999999999999999998 799999996 56779999999999754432233333 222 28
Q ss_pred CccccC----CCCeee
Q 009890 129 PLWLHF----IPGIQF 140 (523)
Q Consensus 129 P~WL~~----~p~i~~ 140 (523)
|.|+.+ .|+|.+
T Consensus 192 P~WV~~~g~~~pDi~f 207 (531)
T PLN02161 192 PLWIREIGDVNKDIYY 207 (531)
T ss_pred CHHHHhhhccCCCceE
Confidence 999975 577643
|
|
| >PLN00197 beta-amylase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=7.5e-05 Score=81.73 Aligned_cols=82 Identities=23% Similarity=0.430 Sum_probs=63.7
Q ss_pred CccchHHHHHHHHhCCCCEEEEccccCcCCC-CCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCC-----C
Q 009890 54 TPEMWPDLIQKSKDGGLDVIETYVFWNLHEP-VRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFG-----G 127 (523)
Q Consensus 54 ~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp-~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~G-----G 127 (523)
.++.-...|+++|++|++.|.+-|.|...|. .|++|||+| -.+++++|+++||++.+-.-=--|+- +-| -
T Consensus 125 ~~~~l~~~L~~LK~~GVdGVmvDvWWGiVE~~~p~~YdWsg---Y~~L~~mvr~~GLKlq~VmSFHqCGG-NVGD~~~Ip 200 (573)
T PLN00197 125 RRKAMKASLQALKSAGVEGIMMDVWWGLVERESPGVYNWGG---YNELLEMAKRHGLKVQAVMSFHQCGG-NVGDSCTIP 200 (573)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeeeeeeccCCCCcCCcHH---HHHHHHHHHHcCCeEEEEEEecccCC-CCCCccccc
Confidence 3455788999999999999999999999998 799999996 56779999999999754432233433 222 3
Q ss_pred CCccccC----CCCee
Q 009890 128 FPLWLHF----IPGIQ 139 (523)
Q Consensus 128 ~P~WL~~----~p~i~ 139 (523)
||.|+.+ +|+|.
T Consensus 201 LP~WV~~~g~~dpDif 216 (573)
T PLN00197 201 LPKWVVEEVDKDPDLA 216 (573)
T ss_pred CCHHHHHhhccCCCce
Confidence 8999975 56763
|
|
| >PLN02803 beta-amylase | Back alignment and domain information |
|---|
Probab=97.74 E-value=8.5e-05 Score=81.07 Aligned_cols=81 Identities=22% Similarity=0.476 Sum_probs=62.4
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCC-CCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCC-----CCC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEP-VRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFG-----GFP 129 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp-~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~G-----G~P 129 (523)
+.-...|+++|++|++.|.+-|-|...|. .|++|||+| -.+++++|+++||++.+-.-=--|+- |-| -||
T Consensus 107 ~~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~p~~YdWsg---Y~~l~~mvr~~GLKlq~vmSFHqCGG-NVGD~~~IpLP 182 (548)
T PLN02803 107 RAMNASLMALRSAGVEGVMVDAWWGLVEKDGPMKYNWEG---YAELVQMVQKHGLKLQVVMSFHQCGG-NVGDSCSIPLP 182 (548)
T ss_pred HHHHHHHHHHHHcCCCEEEEEeeeeeeccCCCCcCCcHH---HHHHHHHHHHcCCeEEEEEEecccCC-CCCCcccccCC
Confidence 44577899999999999999999999999 599999996 56779999999999754432233433 222 389
Q ss_pred ccccC----CCCeee
Q 009890 130 LWLHF----IPGIQF 140 (523)
Q Consensus 130 ~WL~~----~p~i~~ 140 (523)
.|+.+ +|+|.+
T Consensus 183 ~WV~e~~~~~pDi~f 197 (548)
T PLN02803 183 PWVLEEMSKNPDLVY 197 (548)
T ss_pred HHHHHhhhcCCCceE
Confidence 99875 577643
|
|
| >PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00043 Score=72.70 Aligned_cols=142 Identities=19% Similarity=0.247 Sum_probs=81.0
Q ss_pred HHHHHHHHhCCCCEEEEccccCcCCCCC-ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCC
Q 009890 59 PDLIQKSKDGGLDVIETYVFWNLHEPVR-NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPG 137 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~tYvfWn~HEp~~-G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~ 137 (523)
.|.|+-+|+.|+|.||.=| .++|.. |..|.+ +..+..+-|+++||.|+|-+- |- .-|.--|- ...|.
T Consensus 27 ~d~~~ilk~~G~N~vRlRv---wv~P~~~g~~~~~---~~~~~akrak~~Gm~vlldfH-YS-D~WaDPg~----Q~~P~ 94 (332)
T PF07745_consen 27 KDLFQILKDHGVNAVRLRV---WVNPYDGGYNDLE---DVIALAKRAKAAGMKVLLDFH-YS-DFWADPGK----QNKPA 94 (332)
T ss_dssp --HHHHHHHTT--EEEEEE----SS-TTTTTTSHH---HHHHHHHHHHHTT-EEEEEE--SS-SS--BTTB-----B--T
T ss_pred CCHHHHHHhcCCCeEEEEe---ccCCcccccCCHH---HHHHHHHHHHHCCCeEEEeec-cc-CCCCCCCC----CCCCc
Confidence 6899999999999999988 556766 655555 666667777899999999873 11 11111110 00121
Q ss_pred eeeec-CChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccc-ccccCc--cc---HHHHHHHHHHHHhcC
Q 009890 138 IQFRT-DNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNI-DSAYGA--AG---KSYIKWAAGMALSLD 210 (523)
Q Consensus 138 i~~Rt-~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~-~~~~g~--~~---~~y~~~l~~~~~~~g 210 (523)
- -+. +-..-.+++..|++.+++.|++. |=.+=||||.||...- -+..|. .- .++++.-.+..|+.+
T Consensus 95 a-W~~~~~~~l~~~v~~yT~~vl~~l~~~------G~~pd~VQVGNEin~Gmlwp~g~~~~~~~~a~ll~ag~~AVr~~~ 167 (332)
T PF07745_consen 95 A-WANLSFDQLAKAVYDYTKDVLQALKAA------GVTPDMVQVGNEINNGMLWPDGKPSNWDNLAKLLNAGIKAVREVD 167 (332)
T ss_dssp T-CTSSSHHHHHHHHHHHHHHHHHHHHHT------T--ESEEEESSSGGGESTBTTTCTT-HHHHHHHHHHHHHHHHTHS
T ss_pred c-CCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCccEEEeCccccccccCcCCCccCHHHHHHHHHHHHHHHHhcC
Confidence 1 111 33567789999999999999965 4467799999998642 122221 11 233444456666655
Q ss_pred CCcceE-Ecc
Q 009890 211 TGVPWV-MCQ 219 (523)
Q Consensus 211 ~~vP~~-~~~ 219 (523)
..+.++ ++.
T Consensus 168 p~~kV~lH~~ 177 (332)
T PF07745_consen 168 PNIKVMLHLA 177 (332)
T ss_dssp STSEEEEEES
T ss_pred CCCcEEEEEC
Confidence 554433 444
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A .... |
| >PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00015 Score=77.31 Aligned_cols=74 Identities=22% Similarity=0.394 Sum_probs=51.9
Q ss_pred hHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccc----cCCCCCCccc
Q 009890 58 WPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAE----WNFGGFPLWL 132 (523)
Q Consensus 58 W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aE----w~~GG~P~WL 132 (523)
-+..|+++|++|++.|.+.|-|...|.. |++|||+| -+++.++|++.||++.+-.-=--|+- .-+=-||.|+
T Consensus 18 ~~~~L~~LK~~GV~GVmvdvWWGiVE~~~p~~ydWs~---Y~~l~~~vr~~GLk~~~vmsfH~cGgNvgD~~~IpLP~Wv 94 (402)
T PF01373_consen 18 LEAQLRALKSAGVDGVMVDVWWGIVEGEGPQQYDWSG---YRELFEMVRDAGLKLQVVMSFHQCGGNVGDDCNIPLPSWV 94 (402)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEHHHHTGSSTTB---HH---HHHHHHHHHHTT-EEEEEEE-S-BSSSTTSSSEB-S-HHH
T ss_pred HHHHHHHHHHcCCcEEEEEeEeeeeccCCCCccCcHH---HHHHHHHHHHcCCeEEEEEeeecCCCCCCCccCCcCCHHH
Confidence 4678999999999999999999999997 99999995 67889999999999765432222321 1111379999
Q ss_pred cC
Q 009890 133 HF 134 (523)
Q Consensus 133 ~~ 134 (523)
.+
T Consensus 95 ~~ 96 (402)
T PF01373_consen 95 WE 96 (402)
T ss_dssp HH
T ss_pred Hh
Confidence 63
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 14 GH14 from CAZY comprises enzymes with only one known activity; beta-amylase (3.2.1.2 from EC). A Glu residue has been proposed as a catalytic residue, but it is not known if it is the nucleophile or the proton donor. Beta-amylase [, ] is an enzyme that hydrolyses 1,4-alpha-glucosidic linkages in starch-type polysaccharide substrates so as to remove successive maltose units from the non-reducing ends of the chains. Beta-amylase is present in certain bacteria as well as in plants. Three highly conserved sequence regions are found in all known beta-amylases. The first of these regions is located in the N-terminal section of the enzymes and contains an aspartate which is known [] to be involved in the catalytic mechanism. The second, located in a more central location, is centred around a glutamate which is also involved [] in the catalytic mechanism. The 3D structure of a complex of soybean beta-amylase with an inhibitor (alpha-cyclodextrin) has been determined to 3.0A resolution by X-ray diffraction []. The enzyme folds into large and small domains: the large domain has a (beta alpha)8 super-secondary structural core, while the smaller is formed from two long loops extending from the beta-3 and beta-4 strands of the (beta alpha)8 fold []. The interface of the two domains, together with shorter loops from the (beta alpha)8 core, form a deep cleft, in which the inhibitor binds []. Two maltose molecules also bind in the cleft, one sharing a binding site with alpha-cyclodextrin, and the other sitting more deeply in the cleft [].; GO: 0016161 beta-amylase activity, 0000272 polysaccharide catabolic process; PDB: 1FA2_A 2DQX_A 1WDP_A 1UKP_C 1BYC_A 1BYA_A 1Q6C_A 1V3I_A 1BTC_A 1BYB_A .... |
| >PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00035 Score=72.91 Aligned_cols=157 Identities=19% Similarity=0.285 Sum_probs=109.4
Q ss_pred EEEEEeeCCCCCcc-chHHHHHHHHhCCCCEEEEc--cccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCcee
Q 009890 43 LISGSIHYPRSTPE-MWPDLIQKSKDGGLDVIETY--VFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYV 119 (523)
Q Consensus 43 l~sG~iHy~R~~~~-~W~d~l~k~Ka~GlN~V~tY--vfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi 119 (523)
.++..++..+...+ ...+ +-..-+|.|..- .-|...||.+|+|||+ ..+++++.|+++||.|--.+ -+
T Consensus 11 ~~G~av~~~~~~~~~~~~~----~~~~~Fn~~t~eN~~Kw~~~e~~~g~~~~~---~~D~~~~~a~~~g~~vrGH~--Lv 81 (320)
T PF00331_consen 11 PFGAAVNAQQLEDDPRYRE----LFAKHFNSVTPENEMKWGSIEPEPGRFNFE---SADAILDWARENGIKVRGHT--LV 81 (320)
T ss_dssp EEEEEEBGGGHTHHHHHHH----HHHHH-SEEEESSTTSHHHHESBTTBEE-H---HHHHHHHHHHHTT-EEEEEE--EE
T ss_pred CEEEEechhHcCCcHHHHH----HHHHhCCeeeeccccchhhhcCCCCccCcc---chhHHHHHHHhcCcceeeee--EE
Confidence 68888887766444 3444 334558888774 6799999999999999 89999999999999985332 11
Q ss_pred ccccCCCCCCccccCCCCeeeecC-ChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccccc---------
Q 009890 120 CAEWNFGGFPLWLHFIPGIQFRTD-NEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDS--------- 189 (523)
Q Consensus 120 ~aEw~~GG~P~WL~~~p~i~~Rt~-d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~--------- 189 (523)
|.. ..|.|+...+.. ... -+..++.++++++.++.++++. |.|..|-|=||-=.-..
T Consensus 82 ---W~~-~~P~w~~~~~~~--~~~~~~~~~~~l~~~I~~v~~~y~~~-------g~i~~WDVvNE~i~~~~~~~~~r~~~ 148 (320)
T PF00331_consen 82 ---WHS-QTPDWVFNLANG--SPDEKEELRARLENHIKTVVTRYKDK-------GRIYAWDVVNEAIDDDGNPGGLRDSP 148 (320)
T ss_dssp ---ESS-SS-HHHHTSTTS--SBHHHHHHHHHHHHHHHHHHHHTTTT-------TTESEEEEEES-B-TTSSSSSBCTSH
T ss_pred ---Ecc-cccceeeeccCC--CcccHHHHHHHHHHHHHHHHhHhccc-------cceEEEEEeeecccCCCccccccCCh
Confidence 333 789999864110 000 1237888888888888887732 79999999999743221
Q ss_pred ccCcccHHHHHHHHHHHHhcCCCcceEEccCC
Q 009890 190 AYGAAGKSYIKWAAGMALSLDTGVPWVMCQQS 221 (523)
Q Consensus 190 ~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~~~ 221 (523)
.+..-|.+|+..+-++|++...++.++.++-.
T Consensus 149 ~~~~lG~~yi~~aF~~A~~~~P~a~L~~NDy~ 180 (320)
T PF00331_consen 149 WYDALGPDYIADAFRAAREADPNAKLFYNDYN 180 (320)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred hhhcccHhHHHHHHHHHHHhCCCcEEEecccc
Confidence 12234678999999999999999999998854
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B .... |
| >PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.00029 Score=76.80 Aligned_cols=97 Identities=18% Similarity=0.228 Sum_probs=75.3
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC--CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV--RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH 133 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~--~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~ 133 (523)
..|+++|+.||++|+|+.|.-+-|...+|. +|++|-+|-.--+++|+.+.++||..++-. ..-.+|.||.
T Consensus 58 ~~y~eDi~l~~~lg~~~yRfsi~W~Ri~P~g~~g~~n~~~~~~Y~~~i~~l~~~gi~P~vtL--------~H~~~P~~l~ 129 (455)
T PF00232_consen 58 HRYKEDIALMKELGVNAYRFSISWSRIFPDGFEGKVNEEGLDFYRDLIDELLENGIEPIVTL--------YHFDLPLWLE 129 (455)
T ss_dssp HHHHHHHHHHHHHT-SEEEEE--HHHHSTTSSSSSS-HHHHHHHHHHHHHHHHTT-EEEEEE--------ESS--BHHHH
T ss_pred hhhhHHHHHHHhhccceeeeecchhheeecccccccCHhHhhhhHHHHHHHHhhccceeeee--------eeccccccee
Confidence 458999999999999999999999999999 699999999999999999999999988766 4567999998
Q ss_pred CCCCeeeecCChhHHHHHHHHHHHHHHHHHh
Q 009890 134 FIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQ 164 (523)
Q Consensus 134 ~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~ 164 (523)
+.-|- .|+...+...+|.+.+++.+.+
T Consensus 130 ~~ggw----~~~~~~~~F~~Ya~~~~~~~gd 156 (455)
T PF00232_consen 130 DYGGW----LNRETVDWFARYAEFVFERFGD 156 (455)
T ss_dssp HHTGG----GSTHHHHHHHHHHHHHHHHHTT
T ss_pred ecccc----cCHHHHHHHHHHHHHHHHHhCC
Confidence 74443 3466667777777777777774
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A .... |
| >PRK15014 6-phospho-beta-glucosidase BglA; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0017 Score=71.48 Aligned_cols=97 Identities=16% Similarity=0.154 Sum_probs=76.9
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC--CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV--RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH 133 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~--~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~ 133 (523)
..|+++|+.||++|+|+-|+-+-|.-..|. +|+.|-+|-.-.+++|+.+.++||..++-. -.=.+|.||.
T Consensus 69 hry~EDI~Lm~elG~~~yRfSIsWsRI~P~G~~~~~N~~gl~~Y~~lid~l~~~GI~P~vTL--------~H~dlP~~L~ 140 (477)
T PRK15014 69 GHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITL--------SHFEMPLHLV 140 (477)
T ss_pred cccHHHHHHHHHcCCCEEEecccceeeccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEe--------eCCCCCHHHH
Confidence 356999999999999999999999999997 567888888899999999999999988766 3457899997
Q ss_pred CC-CCeeeecCChhHHHHHHHHHHHHHHHHHh
Q 009890 134 FI-PGIQFRTDNEPFKAEMQRFTAKIVDMMKQ 164 (523)
Q Consensus 134 ~~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~ 164 (523)
+. -|- .|+...++-.+|.+.+++.+++
T Consensus 141 ~~yGGW----~n~~~~~~F~~Ya~~~f~~fgd 168 (477)
T PRK15014 141 QQYGSW----TNRKVVDFFVRFAEVVFERYKH 168 (477)
T ss_pred HhcCCC----CChHHHHHHHHHHHHHHHHhcC
Confidence 63 443 3455555566666666666653
|
|
| >PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0095 Score=65.91 Aligned_cols=333 Identities=18% Similarity=0.281 Sum_probs=164.2
Q ss_pred EEEEEEEEEeeC------CCCCccchHHHHHHH---HhCCCCEEEEccc--------cCcCCCCCceee---ccCcc-h-
Q 009890 39 KRRVLISGSIHY------PRSTPEMWPDLIQKS---KDGGLDVIETYVF--------WNLHEPVRNQYN---FEGRY-D- 96 (523)
Q Consensus 39 k~~~l~sG~iHy------~R~~~~~W~d~l~k~---Ka~GlN~V~tYvf--------Wn~HEp~~G~yd---F~G~~-d- 96 (523)
+++.=++|++=- .+.+++.=+.+|+.+ +-+|++.+|+.+- +.+-+ .|+.++ |+=.+ |
T Consensus 74 Q~i~GFGga~Tdasa~~l~~l~~~~r~~ll~~~F~~~G~g~s~~R~pIgssDfs~~~Yty~d-~~~D~~l~~Fs~~~~d~ 152 (496)
T PF02055_consen 74 QTIDGFGGAFTDASAYNLQKLSEEQRDELLRSLFSEDGIGYSLLRVPIGSSDFSTRPYTYDD-VPGDFNLSNFSIAREDK 152 (496)
T ss_dssp EE--EEEEE--HHHHHHHHTS-HHHHHHHHHHHHSTTTT---EEEEEES--SSSSS---ST--STTHTTTTT---HHHHH
T ss_pred eEEEEEeeeHHHHHHHHHHhCCHHHHHHHHHHHhhcCCceEEEEEeeccCcCCcCCcccccC-CCCCCccccCCccccch
Confidence 455567887731 223333222333332 4589999998773 22222 233222 22111 2
Q ss_pred --HHHHHHHHHHc--CCEEEEecCceeccccCCCCCCccccCCCCe----eeec-CChhHHHHHHHHHHHHHHHHHhccc
Q 009890 97 --LVKFVKLVAEA--GLYAHLRIGPYVCAEWNFGGFPLWLHFIPGI----QFRT-DNEPFKAEMQRFTAKIVDMMKQEKL 167 (523)
Q Consensus 97 --L~~fl~la~~~--GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i----~~Rt-~d~~fl~~~~~~~~~i~~~ik~~~l 167 (523)
+..+|+.|++. +|+++.-| |. .|.|++....+ .++. .++.|.+....|+.+.++.++++++
T Consensus 153 ~~~ip~ik~a~~~~~~lki~aSp-------WS---pP~WMKtn~~~~g~g~l~g~~~~~y~~~yA~Y~vkfi~aY~~~GI 222 (496)
T PF02055_consen 153 KYKIPLIKEALAINPNLKIFASP-------WS---PPAWMKTNGSMNGGGSLKGSLGDEYYQAYADYFVKFIQAYKKEGI 222 (496)
T ss_dssp TTHHHHHHHHHHHHTT-EEEEEE-------S------GGGBTTSSSCSS-BBSCGTTSHHHHHHHHHHHHHHHHHHCTT-
T ss_pred hhHHHHHHHHHHhCCCcEEEEec-------CC---CCHHHccCCcCcCCCccCCCCCchhHHHHHHHHHHHHHHHHHCCC
Confidence 34677777654 57777766 43 79999864322 2442 2456878888888888888886554
Q ss_pred ccccCCceEeccccccccccc--------cccC-cccHHHHH-HHHHHHHhcCC--CcceEEccC--CCCCC---ccccC
Q 009890 168 YASQGGPIILSQIENEYGNID--------SAYG-AAGKSYIK-WAAGMALSLDT--GVPWVMCQQ--SDAPD---PIINT 230 (523)
Q Consensus 168 ~~~~gGpII~~QIENEyg~~~--------~~~g-~~~~~y~~-~l~~~~~~~g~--~vP~~~~~~--~~~p~---~vi~~ 230 (523)
+|=++-+-||..... +.+. +..+.|++ .|....++.++ ++-+++++. .+.|+ .++..
T Consensus 223 ------~i~aiT~QNEP~~~~~~~~~~~s~~~t~~~~~~Fi~~~LgP~l~~~~~g~d~kI~~~D~n~~~~~~~~~~il~d 296 (496)
T PF02055_consen 223 ------PIWAITPQNEPDNGSDPNYPWPSMGWTPEEQADFIKNYLGPALRKAGLGKDVKILIYDHNRDNLPDYADTILND 296 (496)
T ss_dssp -------ESEEESSSSCCGGGSTT-SSC--B--HHHHHHHHHHTHHHHHHTSTT-TTSEEEEEEEEGGGTTHHHHHHHTS
T ss_pred ------CeEEEeccCCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEEEEecCCcccchhhhhhhcC
Confidence 899999999987421 1121 23456775 48888888877 777766653 22332 22221
Q ss_pred ------CC--Cccc--C-CC-------CCCCCCCCceEeeeccccccccCCCCCC---CCHHHHHHHHHHHHhcCCeeee
Q 009890 231 ------CN--GFYC--D-QF-------TPNSNNKPKMWTENWSGWFLSFGGAVPY---RPVEDLAFAVARFFQRGGTFQN 289 (523)
Q Consensus 231 ------~n--g~~~--~-~~-------~~~~~~~P~~~tE~~~Gwf~~wG~~~~~---r~~~d~~~~~~~~~~~g~s~~n 289 (523)
.. +++| . .. ....|++..+.||...|.. .|+..... ..++..+..+..-+..+.+ +
T Consensus 297 ~~A~~yv~GiA~HwY~g~~~~~~l~~~h~~~P~k~l~~TE~~~g~~-~~~~~~~~g~w~~~~~y~~~ii~~lnn~~~--g 373 (496)
T PF02055_consen 297 PEAAKYVDGIAFHWYGGDPSPQALDQVHNKFPDKFLLFTEACCGSW-NWDTSVDLGSWDRAERYAHDIIGDLNNWVS--G 373 (496)
T ss_dssp HHHHTTEEEEEEEETTCS-HCHHHHHHHHHSTTSEEEEEEEESS-S-TTS-SS-TTHHHHHHHHHHHHHHHHHTTEE--E
T ss_pred hhhHhheeEEEEECCCCCchhhHHHHHHHHCCCcEEEeeccccCCC-CcccccccccHHHHHHHHHHHHHHHHhhce--e
Confidence 11 2333 1 11 1246889999999875531 12211111 1233444444444555544 2
Q ss_pred eee------eccCCCCCCC-CCCCcccccccCCCCCCcCCCCCChhHHHHHHHHHHHHHhhhcccCCCCCCCCCCCCceE
Q 009890 290 YYM------YHGGTNFDRT-SGGPFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEA 362 (523)
Q Consensus 290 yYM------~hGGTNfG~~-~G~~~~~TSYDy~Api~E~G~~~~pKy~~lk~lh~~i~~~~~~L~~~~~~~~~lg~~~~~ 362 (523)
+-+ -.||-|++.- ..++.++.. +. +|+ .++|.|..|....+||+.-...+-.... .-+.+.++
T Consensus 374 w~~WNl~LD~~GGP~~~~n~~d~~iivd~-~~----~~~--~~~p~yY~~gHfSKFV~PGa~RI~st~~---~~~~~l~~ 443 (496)
T PF02055_consen 374 WIDWNLALDENGGPNWVGNFCDAPIIVDS-DT----GEF--YKQPEYYAMGHFSKFVRPGAVRIGSTSS---SSDSGLEA 443 (496)
T ss_dssp EEEEESEBETTS---TT---B--SEEEEG-GG----TEE--EE-HHHHHHHHHHTTS-TT-EEEEEEES---SSTTTEEE
T ss_pred eeeeeeecCCCCCCcccCCCCCceeEEEc-CC----CeE--EEcHHHHHHHHHhcccCCCCEEEEeecc---CCCCceeE
Confidence 211 2488887532 112222111 11 222 3579999999999998854433322111 11124677
Q ss_pred EEEEcCCCceEEEEEeCCCC-eeEEEEECC-------eEEEecCeeE
Q 009890 363 TVYKTGSGLCSAFLANIGTN-SDVTVKFNG-------NSYLLPAWSV 401 (523)
Q Consensus 363 ~v~~~~~~~~~~Fl~N~~~~-~~~~V~f~~-------~~~~lp~~sv 401 (523)
..|.+.+|.-++-|.|..+. ..++|++++ -.++|||.||
T Consensus 444 vAF~nPDGs~vvVv~N~~~~~~~~~v~v~~~~~~~~~~~~~lp~~s~ 490 (496)
T PF02055_consen 444 VAFLNPDGSIVVVVLNRGDSDQNFSVTVKDGSKGNNHFNVTLPPRSI 490 (496)
T ss_dssp EEEEETTSEEEEEEEE-SSS-EEEEEEEECTTTEE--EEEEEE-TTE
T ss_pred EEEECCCCCEEEEEEcCCCCccceEEEEecCCcceeEEEEEeCCCce
Confidence 77887777777777775543 334566652 3689999875
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A .... |
| >PF14488 DUF4434: Domain of unknown function (DUF4434) | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.014 Score=55.54 Aligned_cols=135 Identities=11% Similarity=0.119 Sum_probs=79.9
Q ss_pred CCCCccchHHHHHHHHhCCCCEEEEccccCcCC-----CC---CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccc
Q 009890 51 PRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHE-----PV---RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAE 122 (523)
Q Consensus 51 ~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HE-----p~---~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aE 122 (523)
-.++++.|+.+++.||+.|+|+|=. -|...+ |. ++.|.-....-|+.+|++|++.||+|.+..+-
T Consensus 15 ~~~~~~~W~~~~~~m~~~GidtlIl--q~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~Gl~~----- 87 (166)
T PF14488_consen 15 QNWTPAQWREEFRAMKAIGIDTLIL--QWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMKVFVGLYF----- 87 (166)
T ss_pred cCCCHHHHHHHHHHHHHcCCcEEEE--EEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCEEEEeCCC-----
Confidence 4689999999999999999999842 122111 11 22233333446999999999999999997741
Q ss_pred cCCCCCCccccCCCCeeeecCChhHH-HHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCcccHHHHHH
Q 009890 123 WNFGGFPLWLHFIPGIQFRTDNEPFK-AEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKW 201 (523)
Q Consensus 123 w~~GG~P~WL~~~p~i~~Rt~d~~fl-~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~ 201 (523)
-|.|-.. .|+... +.-++...+|..+..+ ....=+|=|=.|..... ....+..+.
T Consensus 88 -----~~~~w~~--------~~~~~~~~~~~~v~~el~~~yg~-------h~sf~GWYip~E~~~~~----~~~~~~~~~ 143 (166)
T PF14488_consen 88 -----DPDYWDQ--------GDLDWEAERNKQVADELWQRYGH-------HPSFYGWYIPYEIDDYN----WNAPERFAL 143 (166)
T ss_pred -----Cchhhhc--------cCHHHHHHHHHHHHHHHHHHHcC-------CCCCceEEEecccCCcc----cchHHHHHH
Confidence 1233321 222221 1112233334443333 34677888888887653 234556666
Q ss_pred HHHHHHhcCCCcceE
Q 009890 202 AAGMALSLDTGVPWV 216 (523)
Q Consensus 202 l~~~~~~~g~~vP~~ 216 (523)
|.+.+++..-+-|+.
T Consensus 144 l~~~lk~~s~~~Pv~ 158 (166)
T PF14488_consen 144 LGKYLKQISPGKPVM 158 (166)
T ss_pred HHHHHHHhCCCCCeE
Confidence 666666543355543
|
|
| >PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0027 Score=69.87 Aligned_cols=96 Identities=14% Similarity=0.137 Sum_probs=73.8
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC--CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV--RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH 133 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~--~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~ 133 (523)
..|+++++.||++|+|+.|+-+-|...+|. +++.|-+|-.-.+++|+.|.++||..++-. ..=.+|.||.
T Consensus 71 hry~eDi~l~~~lG~~~yR~si~WsRi~P~g~~~~~n~~~~~~Y~~~i~~l~~~gi~p~VtL--------~H~~~P~~l~ 142 (474)
T PRK09852 71 HRYKEDIALMAEMGFKVFRTSIAWSRLFPQGDELTPNQQGIAFYRSVFEECKKYGIEPLVTL--------CHFDVPMHLV 142 (474)
T ss_pred hhhHHHHHHHHHcCCCeEEeeceeeeeeeCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEe--------eCCCCCHHHH
Confidence 446999999999999999999999999997 566788888889999999999999987765 3457899997
Q ss_pred CC-CCeeeecCChhHHHHHHHHHHHHHHHHH
Q 009890 134 FI-PGIQFRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 134 ~~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
.. -|- .|+...++..+|.+.+++.++
T Consensus 143 ~~~GGW----~~~~~~~~F~~ya~~~~~~fg 169 (474)
T PRK09852 143 TEYGSW----RNRKMVEFFSRYARTCFEAFD 169 (474)
T ss_pred HhcCCC----CCHHHHHHHHHHHHHHHHHhc
Confidence 53 443 234444555555555555554
|
|
| >COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0087 Score=62.23 Aligned_cols=133 Identities=22% Similarity=0.309 Sum_probs=101.9
Q ss_pred HHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCC
Q 009890 65 SKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDN 144 (523)
Q Consensus 65 ~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d 144 (523)
.|+.+.=|=+.=.=|+..||++|.|+|+ --++..+.|+++||.+.-.+ .| |.. -.|.|+.... -.-
T Consensus 55 ~re~n~iTpenemKwe~i~p~~G~f~Fe---~AD~ia~FAr~h~m~lhGHt--Lv---W~~-q~P~W~~~~e-----~~~ 120 (345)
T COG3693 55 ARECNQITPENEMKWEAIEPERGRFNFE---AADAIANFARKHNMPLHGHT--LV---WHS-QVPDWLFGDE-----LSK 120 (345)
T ss_pred HhhhcccccccccccccccCCCCccCcc---chHHHHHHHHHcCCeeccce--ee---ecc-cCCchhhccc-----cCh
Confidence 6666666666667799999999999999 68999999999999764322 22 333 5788887522 134
Q ss_pred hhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccccc-------ccCcccHHHHHHHHHHHHhcCCCcceEE
Q 009890 145 EPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDS-------AYGAAGKSYIKWAAGMALSLDTGVPWVM 217 (523)
Q Consensus 145 ~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~-------~~g~~~~~y~~~l~~~~~~~g~~vP~~~ 217 (523)
+...+.|++++..++.+.| |-|+.|-|=||-=.-+. ..+-.+.+|+++.-+.|++.+-+--++.
T Consensus 121 ~~~~~~~e~hI~tV~~rYk---------g~~~sWDVVNE~vdd~g~~R~s~w~~~~~gpd~I~~aF~~AreadP~AkL~~ 191 (345)
T COG3693 121 EALAKMVEEHIKTVVGRYK---------GSVASWDVVNEAVDDQGSLRRSAWYDGGTGPDYIKLAFHIAREADPDAKLVI 191 (345)
T ss_pred HHHHHHHHHHHHHHHHhcc---------CceeEEEecccccCCCchhhhhhhhccCCccHHHHHHHHHHHhhCCCceEEe
Confidence 6788999999999999988 35999999999743211 1224688999999999999998888888
Q ss_pred ccC
Q 009890 218 CQQ 220 (523)
Q Consensus 218 ~~~ 220 (523)
++-
T Consensus 192 NDY 194 (345)
T COG3693 192 NDY 194 (345)
T ss_pred ecc
Confidence 875
|
|
| >smart00812 Alpha_L_fucos Alpha-L-fucosidase | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.92 Score=48.85 Aligned_cols=247 Identities=16% Similarity=0.215 Sum_probs=132.6
Q ss_pred CCCCccchHHHHHHHHhCCCCEEEE-------ccccCcCCCCCceeeccCcch-HHHHHHHHHHcCCEEEEecCceecc-
Q 009890 51 PRSTPEMWPDLIQKSKDGGLDVIET-------YVFWNLHEPVRNQYNFEGRYD-LVKFVKLVAEAGLYAHLRIGPYVCA- 121 (523)
Q Consensus 51 ~R~~~~~W~d~l~k~Ka~GlN~V~t-------YvfWn~HEp~~G~ydF~G~~d-L~~fl~la~~~GL~Vilr~GPyi~a- 121 (523)
.+..++.| .+.+|++|+.-|=. +-.|+..-..-..-+-.-.+| |..+.+.|+++||.+-+ |...
T Consensus 79 ~~fD~~~W---a~~~k~AGakY~vlTaKHHDGF~lw~S~~t~~n~~~~~pkrDiv~el~~A~rk~Glk~G~----Y~S~~ 151 (384)
T smart00812 79 EKFDPEEW---ADLFKKAGAKYVVLTAKHHDGFCLWDSKYSNWNAVDTGPKRDLVGELADAVRKRGLKFGL----YHSLF 151 (384)
T ss_pred hhCCHHHH---HHHHHHcCCCeEEeeeeecCCccccCCCCCCCcccCCCCCcchHHHHHHHHHHcCCeEEE----EcCHH
Confidence 34456656 56788888885542 223654432211112111456 66788999999997766 4443
Q ss_pred ccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCcccHH-HHH
Q 009890 122 EWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKS-YIK 200 (523)
Q Consensus 122 Ew~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~-y~~ 200 (523)
+|.. |.|....+.-..+.+.+.|.++++.|..+|.+.|.++ ||-|+|- +-..+ ..... -.+
T Consensus 152 DW~~---p~y~~~~~~~~~~~~~~~~~~y~~~~~~Ql~ELit~Y-------gpd~lWf-D~~~~-------~~~~~~~~~ 213 (384)
T smart00812 152 DWFN---PLYAGPTSSDEDPDNWPRFQEFVDDWLPQLRELVTRY-------KPDLLWF-DGGWE-------APDDYWRSK 213 (384)
T ss_pred HhCC---CccccccccccccccchhHHHHHHHHHHHHHHHHhcC-------CCceEEE-eCCCC-------CccchhcHH
Confidence 7764 5443211111133456788999988888888888743 2444442 11111 11111 144
Q ss_pred HHHHHHHhcCCCc-ceEEccCCCCCCccccCCCCcc--c-CCCCCCC-CCCCceEeeec-cccccccCC-CCCCCCHHHH
Q 009890 201 WAAGMALSLDTGV-PWVMCQQSDAPDPIINTCNGFY--C-DQFTPNS-NNKPKMWTENW-SGWFLSFGG-AVPYRPVEDL 273 (523)
Q Consensus 201 ~l~~~~~~~g~~v-P~~~~~~~~~p~~vi~~~ng~~--~-~~~~~~~-~~~P~~~tE~~-~Gwf~~wG~-~~~~r~~~d~ 273 (523)
.|.++++++..+. =.+.++... ... +. .|.+ | +...|.. ...|.-.+--. .+|+-+-+. ....++++++
T Consensus 214 ~l~~~~~~~qP~~~~vvvn~R~~-~~~--~~-~g~~~~~~e~~~p~~~~~~pwE~~~ti~~sWgy~~~~~~~~~ks~~~l 289 (384)
T smart00812 214 EFLAWLYNLSPVKDTVVVNDRWG-GTG--CK-HGGFYTDEERGAPGKLLPHPWETCTTIGKSWGYRRNESDSDYKSPKEL 289 (384)
T ss_pred HHHHHHHHhCCCCceEEEEcccc-ccC--CC-CCCcccCcccCCCCCCCCCCcccccccCCCCCcCCCCCcccCCCHHHH
Confidence 5666666655543 112232211 000 00 0111 1 1111111 11222111111 244433332 2336799999
Q ss_pred HHHHHHHHhcCCee-eeeeeeccCCCCCCCCCCCcccccccCCCCCCcCCCCCChhHHHHHHHHHHHHHhhhcccCCCCC
Q 009890 274 AFAVARFFQRGGTF-QNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPT 352 (523)
Q Consensus 274 ~~~~~~~~~~g~s~-~nyYM~hGGTNfG~~~G~~~~~TSYDy~Api~E~G~~~~pKy~~lk~lh~~i~~~~~~L~~~~~~ 352 (523)
...+....++||++ +|. | -+.+|.+.+..-..|+++...|+..++++..+.|.
T Consensus 290 i~~l~~~Vsk~GnlLLNV---------g-----------------P~~dG~ip~~~~~~L~~iG~Wl~~ngeaIy~tr~~ 343 (384)
T smart00812 290 IRDLVDIVSKGGNLLLNV---------G-----------------PKADGTIPEEEEERLLEIGKWLKVNGEAIYGTRPW 343 (384)
T ss_pred HHHHhhhcCCCceEEEcc---------C-----------------CCCCCCCCHHHHHHHHHHHHHHHhCCceeecCCCC
Confidence 99888999999884 332 2 34668887777889999999999999999877664
|
O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site PUBMED:. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. |
| >COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0057 Score=65.91 Aligned_cols=134 Identities=13% Similarity=0.110 Sum_probs=79.9
Q ss_pred EECCEEEEEEEEEeeCCCC-Cccch-----HHHHHHHHhCCCCEEEEccccCcCCCCC--ceeec--cCcchHHHHHHHH
Q 009890 35 VIGGKRRVLISGSIHYPRS-TPEMW-----PDLIQKSKDGGLDVIETYVFWNLHEPVR--NQYNF--EGRYDLVKFVKLV 104 (523)
Q Consensus 35 ~idGk~~~l~sG~iHy~R~-~~~~W-----~d~l~k~Ka~GlN~V~tYvfWn~HEp~~--G~ydF--~G~~dL~~fl~la 104 (523)
.+.+...+.+--..|-... ...-| ++.+..||.+|||+||+++.|..+++.. ..|-. .--.-|++.|+.|
T Consensus 46 ~~~~~~~~g~~lg~~~~~~~~~~~w~~~~~~~~~~~ik~~G~n~VRiPi~~~~~~~~~~~~p~~~~~~~~~~ld~~I~~a 125 (407)
T COG2730 46 QLVGVSWFGLNLGNHLAQGLLESHWGNFITEEDFDQIKSAGFNAVRIPIGYWALQATDGDNPYLIGLTQLKILDEAINWA 125 (407)
T ss_pred eeecccccceecCchhhcccchhccchhhhhhHHHHHHHcCCcEEEcccchhhhhccCCCCCCeecchHHHHHHHHHHHH
Confidence 3333333333333333332 45567 8999999999999999999954445542 22222 1112689999999
Q ss_pred HHcCCEEEEec----CceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccc
Q 009890 105 AEAGLYAHLRI----GPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQI 180 (523)
Q Consensus 105 ~~~GL~Vilr~----GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QI 180 (523)
++.||+|++-. |.-.|-| ..|... .. ....+.+++..+-++.|+.+++. .-.||++|+
T Consensus 126 ~~~gi~V~iD~H~~~~~~~~~~------~s~~~~--~~---~~~~~~~~~~~~~w~~ia~~f~~-------~~~VIg~~~ 187 (407)
T COG2730 126 KKLGIYVLIDLHGYPGGNNGHE------HSGYTS--DY---KEENENVEATIDIWKFIANRFKN-------YDTVIGFEL 187 (407)
T ss_pred HhcCeeEEEEecccCCCCCCcC------cccccc--cc---cccchhHHHHHHHHHHHHHhccC-------CCceeeeee
Confidence 99999999874 2111111 122211 00 01223344445555666666663 458999999
Q ss_pred cccccc
Q 009890 181 ENEYGN 186 (523)
Q Consensus 181 ENEyg~ 186 (523)
=||.-.
T Consensus 188 ~NEP~~ 193 (407)
T COG2730 188 INEPNG 193 (407)
T ss_pred ecCCcc
Confidence 999974
|
|
| >PLN02998 beta-glucosidase | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0018 Score=71.50 Aligned_cols=100 Identities=16% Similarity=0.172 Sum_probs=76.5
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++|+.||++|+|+-|+-+-|.-.+|. .|.+|-+|-.--+++|+.+.++||..++-. -.=.+|.||.+
T Consensus 82 hry~EDi~lmk~lG~~~YRfSIsWsRI~P~G~g~vN~~gl~~Y~~lid~L~~~GIeP~VTL--------~H~dlP~~L~~ 153 (497)
T PLN02998 82 HKYKEDVKLMADMGLEAYRFSISWSRLLPSGRGPINPKGLQYYNNLIDELITHGIQPHVTL--------HHFDLPQALED 153 (497)
T ss_pred HhhHHHHHHHHHcCCCeEEeeccHHhcCcCCCCCcCHHHHHHHHHHHHHHHHcCCceEEEe--------cCCCCCHHHHH
Confidence 457999999999999999999999999996 678898999999999999999999877655 23468999986
Q ss_pred C-CCeeeecCChhHHHHHHHHHHHHHHHHH
Q 009890 135 I-PGIQFRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 135 ~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
. -|-.=|..=..|.++++.-++++.+++|
T Consensus 154 ~yGGW~n~~~v~~F~~YA~~~~~~fgdrVk 183 (497)
T PLN02998 154 EYGGWLSQEIVRDFTAYADTCFKEFGDRVS 183 (497)
T ss_pred hhCCcCCchHHHHHHHHHHHHHHHhcCcCC
Confidence 3 5532222224455666555555555555
|
|
| >COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.016 Score=59.77 Aligned_cols=124 Identities=21% Similarity=0.230 Sum_probs=81.6
Q ss_pred hHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHH---HcCCEEEEecCceeccccCCCCCCccccC
Q 009890 58 WPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVA---EAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 58 W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~---~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
=.|.|+-+|+.|+|-||.-| |+.---.-|+=.=.|+.|+.+.+++++ ..||+|++..= | ++| =.=|+- ..
T Consensus 65 ~qD~~~iLK~~GvNyvRlRv-wndP~dsngn~yggGnnD~~k~ieiakRAk~~GmKVl~dFH-Y--SDf--waDPak-Q~ 137 (403)
T COG3867 65 RQDALQILKNHGVNYVRLRV-WNDPYDSNGNGYGGGNNDLKKAIEIAKRAKNLGMKVLLDFH-Y--SDF--WADPAK-QK 137 (403)
T ss_pred HHHHHHHHHHcCcCeEEEEE-ecCCccCCCCccCCCcchHHHHHHHHHHHHhcCcEEEeecc-c--hhh--ccChhh-cC
Confidence 37999999999999999977 554333345544457789999998875 67999999861 1 111 000110 01
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc-cccccCcc
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN-IDSAYGAA 194 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~-~~~~~g~~ 194 (523)
.|.-..--+-+.-++++-.|++..+..|++++. -+=|+||.||-.+ .-++.|+.
T Consensus 138 kPkaW~~l~fe~lk~avy~yTk~~l~~m~~eGi------~pdmVQVGNEtn~gflwp~Ge~ 192 (403)
T COG3867 138 KPKAWENLNFEQLKKAVYSYTKYVLTTMKKEGI------LPDMVQVGNETNGGFLWPDGEG 192 (403)
T ss_pred CcHHhhhcCHHHHHHHHHHHHHHHHHHHHHcCC------CccceEeccccCCceeccCCCC
Confidence 232111223455678888999999999997754 4569999999854 34445643
|
|
| >PRK13511 6-phospho-beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0023 Score=70.21 Aligned_cols=97 Identities=12% Similarity=0.108 Sum_probs=73.4
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++|+.||++|+|+-|+-+.|.-.+|. .|.+|-+|-.--+++|+.|.++||.-++-. -.=.+|.||.+
T Consensus 54 ~ry~eDi~L~~~lG~~~yRfSIsWsRI~P~G~g~vN~~gl~~Y~~lid~l~~~GI~P~VTL--------~H~dlP~~L~~ 125 (469)
T PRK13511 54 HRYPEDLKLAEEFGVNGIRISIAWSRIFPDGYGEVNPKGVEYYHRLFAECHKRHVEPFVTL--------HHFDTPEALHS 125 (469)
T ss_pred hhhHHHHHHHHHhCCCEEEeeccHhhcCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe--------cCCCCcHHHHH
Confidence 446999999999999999999999999997 578898998999999999999999877665 24468999986
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHH
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVD 160 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~ 160 (523)
.-|-.=|..=..|.++++..++++.+
T Consensus 126 ~GGW~n~~~v~~F~~YA~~~~~~fgd 151 (469)
T PRK13511 126 NGDWLNRENIDHFVRYAEFCFEEFPE 151 (469)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 54431121123355555555555544
|
|
| >PRK09593 arb 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0028 Score=69.82 Aligned_cols=100 Identities=14% Similarity=0.099 Sum_probs=75.1
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC--CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV--RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH 133 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~--~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~ 133 (523)
..|+++|+.||++|+|+-|+-+-|.-.+|. +|++|=+|-.--+++|+.+.++||..++-. -.=.+|.||.
T Consensus 73 hry~eDi~Lm~~lG~~aYRfSIsWsRI~P~G~~~~~N~~gl~~Y~~lId~L~~~GI~P~VTL--------~H~dlP~~L~ 144 (478)
T PRK09593 73 HHYKEDIALFAEMGFKTYRMSIAWTRIFPKGDELEPNEAGLQFYEDIFKECHKYGIEPLVTI--------THFDCPMHLI 144 (478)
T ss_pred HhhHHHHHHHHHcCCCEEEEecchhhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEe--------cccCCCHHHH
Confidence 457999999999999999999999999997 667888888889999999999999877655 2346899997
Q ss_pred CC-CCeeeecCChhHHHHHHHHHHHHHHHHH
Q 009890 134 FI-PGIQFRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 134 ~~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
+. -|-.=|..=..|.++++.-++++.++++
T Consensus 145 ~~~GGW~n~~~v~~F~~YA~~~~~~fgdrVk 175 (478)
T PRK09593 145 EEYGGWRNRKMVGFYERLCRTLFTRYKGLVK 175 (478)
T ss_pred hhcCCCCChHHHHHHHHHHHHHHHHhcCcCC
Confidence 64 4531222223455555555555555554
|
|
| >TIGR01233 lacG 6-phospho-beta-galactosidase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.007 Score=66.49 Aligned_cols=96 Identities=14% Similarity=0.107 Sum_probs=74.4
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++|+.||++|+|+-|+-+-|.-.+|. +|++|=+|-.--+++|+.|.++||..++-. ..=.+|.||.+
T Consensus 53 hry~eDi~L~~~lG~~~yRfSIsWsRI~P~g~~~~N~~gl~~Y~~lid~l~~~GI~P~VTL--------~H~dlP~~L~~ 124 (467)
T TIGR01233 53 HKYPVDLELAEEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTL--------HHFDTPEALHS 124 (467)
T ss_pred hhHHHHHHHHHHcCCCEEEEecchhhccCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEec--------cCCCCcHHHHH
Confidence 457999999999999999999999999996 678888888899999999999999977765 23468999987
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHH
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
..|- .|+...++-.+|.+.+++.++
T Consensus 125 ~GGW----~n~~~v~~F~~YA~~~f~~fg 149 (467)
T TIGR01233 125 NGDF----LNRENIEHFIDYAAFCFEEFP 149 (467)
T ss_pred cCCC----CCHHHHHHHHHHHHHHHHHhC
Confidence 6553 234444444455555554444
|
This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation. |
| >PLN02814 beta-glucosidase | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0026 Score=70.51 Aligned_cols=100 Identities=18% Similarity=0.171 Sum_probs=75.3
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++|+.||++|+|+-|+-+-|.-.+|. +|++|-+|-.--+++|+.|.++||..++-. -.=-+|.||.+
T Consensus 77 hry~EDI~L~k~lG~~ayRfSIsWsRI~P~G~g~~N~~Gl~fY~~lId~l~~~GI~P~VTL--------~H~dlP~~L~~ 148 (504)
T PLN02814 77 HKYKEDVKLMAEMGLESFRFSISWSRLIPNGRGLINPKGLLFYKNLIKELRSHGIEPHVTL--------YHYDLPQSLED 148 (504)
T ss_pred HhhHHHHHHHHHcCCCEEEEeccHhhcCcCCCCCCCHHHHHHHHHHHHHHHHcCCceEEEe--------cCCCCCHHHHH
Confidence 457999999999999999999999999996 688999999999999999999999877655 23358999986
Q ss_pred C-CCeeeecCChhHHHHHHHHHHHHHHHHH
Q 009890 135 I-PGIQFRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 135 ~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
. -|-.=|..=..|.++++.-++++.+++|
T Consensus 149 ~yGGW~n~~~i~~F~~YA~~~f~~fgdrVk 178 (504)
T PLN02814 149 EYGGWINRKIIEDFTAFADVCFREFGEDVK 178 (504)
T ss_pred hcCCcCChhHHHHHHHHHHHHHHHhCCcCC
Confidence 4 4431222223455555555555555554
|
|
| >PRK09589 celA 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.003 Score=69.46 Aligned_cols=100 Identities=16% Similarity=0.111 Sum_probs=75.8
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC--CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV--RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH 133 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~--~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~ 133 (523)
..|+++|+.||++|+|+-|+-+-|.-.+|. +|++|=+|-.--+++|+.|.++||.-++-. -.=.+|.||.
T Consensus 67 hry~eDi~Lm~~lG~~~yRfSIsWsRI~P~G~~~~~N~~gl~~Y~~lid~L~~~GI~P~VTL--------~H~dlP~~L~ 138 (476)
T PRK09589 67 HRYKEDIALFAEMGFKCFRTSIAWTRIFPQGDELEPNEEGLQFYDDLFDECLKQGIEPVVTL--------SHFEMPYHLV 138 (476)
T ss_pred HhhHHHHHHHHHcCCCEEEeccchhhcCcCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEe--------cCCCCCHHHH
Confidence 457999999999999999999999999997 566888888889999999999999877665 2446899997
Q ss_pred CC-CCeeeecCChhHHHHHHHHHHHHHHHHH
Q 009890 134 FI-PGIQFRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 134 ~~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
+. -|-.=|..=..|.++++.-++++.+++|
T Consensus 139 ~~yGGW~n~~~i~~F~~YA~~~f~~fgdrVk 169 (476)
T PRK09589 139 TEYGGWRNRKLIDFFVRFAEVVFTRYKDKVK 169 (476)
T ss_pred HhcCCcCChHHHHHHHHHHHHHHHHhcCCCC
Confidence 53 5532222223455555555555555555
|
|
| >PF02837 Glyco_hydro_2_N: Glycosyl hydrolases family 2, sugar binding domain; InterPro: IPR006104 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.01 Score=55.20 Aligned_cols=75 Identities=29% Similarity=0.434 Sum_probs=53.6
Q ss_pred cceeEeeccCCCCCCCccccchhhhhhhccCCCceeeEEEeEEEecCCCccccCCCeeEEEEeecCcEEEEEEcCeeeec
Q 009890 443 SGWSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLSTNIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVGE 522 (523)
Q Consensus 443 ~~W~~~~E~~~~~~~~~~~~~~llEq~~~T~D~sDYLWY~T~v~i~~~~~~~~~~~~~~L~v~s~gh~lh~FVNg~~~G~ 522 (523)
..|....-|-. +....+....+-.+...+...+.+.||.++|++.++. .+....|++.+..+...|||||+++|+
T Consensus 35 ~~w~~i~VP~~-~~~~~~~~~~~~~~~~~~~~~~~~~wYr~~f~lp~~~----~~~~~~L~f~gv~~~a~v~vNG~~vg~ 109 (167)
T PF02837_consen 35 SDWQPISVPGS-WEDDLLRAFVPENGDPELWDYSGYAWYRRTFTLPADW----KGKRVFLRFEGVDYAAEVYVNGKLVGS 109 (167)
T ss_dssp TTSEEEEESSE-GTCCTSSTBTTSTTGCCTSTCCSEEEEEEEEEESGGG----TTSEEEEEESEEESEEEEEETTEEEEE
T ss_pred CCCeEEeCCCE-eecCccceeccccccccccccCceEEEEEEEEeCchh----cCceEEEEeccceEeeEEEeCCeEEee
Confidence 36776654422 2112222222333566777889999999999997544 357889999999999999999999996
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. This domain has a jelly-roll fold [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3DEC_A 3OB8_A 3OBA_A 3CMG_A 3FN9_C 2VZU_A 2X09_A 2VZO_A 2X05_A 2VZV_B .... |
| >PLN02849 beta-glucosidase | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0042 Score=68.83 Aligned_cols=100 Identities=18% Similarity=0.207 Sum_probs=75.8
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++|+.||++|+|+-|+-+-|.-.+|. .|++|=+|-.--+++|+.+.++||.-++-. -.=-+|.||.+
T Consensus 79 hrY~eDI~Lm~~lG~~aYRfSIsWsRI~P~G~g~vN~~gl~fY~~lid~l~~~GI~P~VTL--------~H~dlP~~L~~ 150 (503)
T PLN02849 79 HKYKEDVKLMVETGLDAFRFSISWSRLIPNGRGSVNPKGLQFYKNFIQELVKHGIEPHVTL--------FHYDHPQYLED 150 (503)
T ss_pred HhHHHHHHHHHHcCCCeEEEeccHHhcCcCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEee--------cCCCCcHHHHH
Confidence 457999999999999999999999999996 478888898899999999999999977655 24468999986
Q ss_pred C-CCeeeecCChhHHHHHHHHHHHHHHHHH
Q 009890 135 I-PGIQFRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 135 ~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
. -|-.=|..=..|.++++.-++++.+++|
T Consensus 151 ~yGGW~nr~~v~~F~~YA~~~f~~fgDrVk 180 (503)
T PLN02849 151 DYGGWINRRIIKDFTAYADVCFREFGNHVK 180 (503)
T ss_pred hcCCcCCchHHHHHHHHHHHHHHHhcCcCC
Confidence 3 5532222223455555555555555555
|
|
| >COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.012 Score=64.23 Aligned_cols=100 Identities=19% Similarity=0.273 Sum_probs=74.5
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCCc--eeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVRN--QYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH 133 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G--~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~ 133 (523)
..++++|+.||++|+|+.|+-|-|...-|..+ +.|=.|-.--+++++.|.++|+.-++-. ..=-+|.||.
T Consensus 59 hrYkeDi~L~~emG~~~~R~SI~WsRIfP~g~~~e~N~~gl~fY~~l~del~~~gIep~vTL--------~Hfd~P~~L~ 130 (460)
T COG2723 59 HRYKEDIALAKEMGLNAFRTSIEWSRIFPNGDGGEVNEKGLRFYDRLFDELKARGIEPFVTL--------YHFDLPLWLQ 130 (460)
T ss_pred hhhHHHHHHHHHcCCCEEEeeeeEEEeecCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe--------cccCCcHHHh
Confidence 44689999999999999999999999999754 4888888889999999999999977765 3445899998
Q ss_pred CC-CCeeeecCChhHHHHHHHHHHHHHHHHH
Q 009890 134 FI-PGIQFRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 134 ~~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
+. .|-.=|..=..|.++.+.-+++.-+.+|
T Consensus 131 ~~ygGW~nR~~i~~F~~ya~~vf~~f~dkVk 161 (460)
T COG2723 131 KPYGGWENRETVDAFARYAATVFERFGDKVK 161 (460)
T ss_pred hccCCccCHHHHHHHHHHHHHHHHHhcCcce
Confidence 75 4543333333454544444444444444
|
|
| >PF14871 GHL6: Hypothetical glycosyl hydrolase 6 | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.063 Score=49.29 Aligned_cols=99 Identities=14% Similarity=0.121 Sum_probs=67.2
Q ss_pred HHHHHHHhCCCCEEEEccc----c-----CcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCc
Q 009890 60 DLIQKSKDGGLDVIETYVF----W-----NLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPL 130 (523)
Q Consensus 60 d~l~k~Ka~GlN~V~tYvf----W-----n~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~ 130 (523)
..++.+|++|+|+|.++.- | ..|.+.|+- ++.-|..+++.|++.||.|++|...- -.|+..--.|.
T Consensus 4 ~~~~~lk~~~v~si~i~a~~h~g~ayYPt~~~~~hp~L----~~Dllge~v~a~h~~Girv~ay~~~~-~d~~~~~~HPe 78 (132)
T PF14871_consen 4 QFVDTLKEAHVNSITIFAKCHGGYAYYPTKVGPRHPGL----KRDLLGEQVEACHERGIRVPAYFDFS-WDEDAAERHPE 78 (132)
T ss_pred HHHHHHHHhCCCEEEEEcccccEEEEccCCCCcCCCCC----CcCHHHHHHHHHHHCCCEEEEEEeee-cChHHHHhCCc
Confidence 4567899999999998542 2 345555544 22247999999999999999998655 44555556799
Q ss_pred cccCCCCee-------------eecCChhHHHHHHHHHHHHHHHHH
Q 009890 131 WLHFIPGIQ-------------FRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 131 WL~~~p~i~-------------~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
|+...++-+ .-.-|.+|++++.+-+++|++.+.
T Consensus 79 W~~~~~~G~~~~~~~~~~~~~~~~c~ns~Y~e~~~~~i~Ei~~~y~ 124 (132)
T PF14871_consen 79 WFVRDADGRPMRGERFGYPGWYTCCLNSPYREFLLEQIREILDRYD 124 (132)
T ss_pred eeeECCCCCCcCCCCcCCCCceecCCCccHHHHHHHHHHHHHHcCC
Confidence 997533211 112356788877777777766554
|
|
| >KOG2230 consensus Predicted beta-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.13 Score=57.16 Aligned_cols=150 Identities=16% Similarity=0.241 Sum_probs=101.5
Q ss_pred cceEEECCEEEEEEEEEeeCC-----CCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHH
Q 009890 31 HRAVVIGGKRRVLISGSIHYP-----RSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVA 105 (523)
Q Consensus 31 ~~~l~idGk~~~l~sG~iHy~-----R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~ 105 (523)
+..|.|||.|.++.+++.-++ |.+-+.-+-+|+.++++|+|+++.+ .. |.+.-+.|-++|.
T Consensus 327 nfyfkin~~pvflkg~nwip~s~f~dr~t~~~~~~LL~Sv~e~~MN~lRVW---GG-----------GvYEsd~FY~lad 392 (867)
T KOG2230|consen 327 NFYFKINDEPVFLKGTNWIPVSMFRDRENIAKTEFLLDSVAEVGMNMLRVW---GG-----------GVYESDYFYQLAD 392 (867)
T ss_pred eeEEEEcCcEEEeecCCccChHHHHhhHHHHHHHHHHHHHHHhCcceEEEe---cC-----------ccccchhHHHHhh
Confidence 357899999999998886542 2344555668999999999999984 32 3445689999999
Q ss_pred HcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccc--ccc
Q 009890 106 EAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQI--ENE 183 (523)
Q Consensus 106 ~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QI--ENE 183 (523)
+.||.|--.. =|.|| +=..|+.|+..++.=++.=+.+++.|+ .||.+-= |||
T Consensus 393 ~lGilVWQD~-MFACA------------------lYPt~~eFl~sv~eEV~yn~~Rls~Hp-------SviIfsgNNENE 446 (867)
T KOG2230|consen 393 SLGILVWQDM-MFACA------------------LYPTNDEFLSSVREEVRYNAMRLSHHP-------SVIIFSGNNENE 446 (867)
T ss_pred hccceehhhh-HHHhh------------------cccCcHHHHHHHHHHHHHHHHhhccCC-------eEEEEeCCCccH
Confidence 9999875433 13332 223578899999999988888888665 6777764 445
Q ss_pred ccccccccCc-------ccHHH----HHHHHHHHHhcCCCcceEEccC
Q 009890 184 YGNIDSAYGA-------AGKSY----IKWAAGMALSLDTGVPWVMCQQ 220 (523)
Q Consensus 184 yg~~~~~~g~-------~~~~y----~~~l~~~~~~~g~~vP~~~~~~ 220 (523)
-.-.+..|+. .-+.| .+-++++++.-.-..|.+|...
T Consensus 447 aAl~~nWy~~sf~~~~~~~kdyvlly~~~i~el~l~~~~srPfi~SSP 494 (867)
T KOG2230|consen 447 AALVQNWYGTSFERDRFESKDYVLLYANVIHELKLVSHSSRPFIVSSP 494 (867)
T ss_pred HHHHhhhhcccccccchhhhhhhHHHHHHHHHHHhhcCCCCCceecCC
Confidence 3322222331 12334 3445566666667789888653
|
|
| >COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.043 Score=59.80 Aligned_cols=157 Identities=14% Similarity=0.177 Sum_probs=106.8
Q ss_pred eEEECCEEEEEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEccccCcC-CCC---Cceeecc-CcchHHHHHHHHHHc
Q 009890 33 AVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLH-EPV---RNQYNFE-GRYDLVKFVKLVAEA 107 (523)
Q Consensus 33 ~l~idGk~~~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~H-Ep~---~G~ydF~-G~~dL~~fl~la~~~ 107 (523)
.|.++++++-.++..--++++..++-+++|..|+..|++++|..+ +. |+- +|.-+-. |..-++.|++.|.+.
T Consensus 3 ~F~Lg~n~wprIanikmw~~~~~~ei~~dle~a~~vg~k~lR~fi---LDgEdc~d~~G~~na~s~~~y~~~fla~a~~l 79 (587)
T COG3934 3 VFALGLNRWPRIANIKMWPAIGNREIKADLEPAGFVGVKDLRLFI---LDGEDCRDKEGYRNAGSNVWYAAWFLAPAGYL 79 (587)
T ss_pred eEEeccccchhhhhhhHHHHhhhhhhhcccccccCccceeEEEEE---ecCcchhhhhceecccccHHHHHHHhhhcccC
Confidence 377888888777776667777777888899999999999999974 55 662 3332222 234689999999999
Q ss_pred CCEEEEecCceeccccCCCCCC---ccccC-CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccc
Q 009890 108 GLYAHLRIGPYVCAEWNFGGFP---LWLHF-IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENE 183 (523)
Q Consensus 108 GL~Vilr~GPyi~aEw~~GG~P---~WL~~-~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENE 183 (523)
+|+|+++. |.+-=.+||-- .|--. .|+-.+ .|+.++..-++|+..+++-.|. ...|.+|-+-||
T Consensus 80 ~lkvlitl---ivg~~hmgg~Nw~Ipwag~~~pdn~i--yD~k~~~~~kkyvedlVk~yk~-------~ptI~gw~l~Ne 147 (587)
T COG3934 80 DLKVLITL---IVGLKHMGGTNWRIPWAGEQSPDNVI--YDPKFRGPGKKYVEDLVKPYKL-------DPTIAGWALRNE 147 (587)
T ss_pred cceEEEEE---eecccccCcceeEeecCCCCCccccc--cchhhcccHHHHHHHHhhhhcc-------ChHHHHHHhcCC
Confidence 99998775 44322345532 14321 233111 2566666667788888775554 458999999999
Q ss_pred ccccccccCcccHHHHHHHHHHHH
Q 009890 184 YGNIDSAYGAAGKSYIKWAAGMAL 207 (523)
Q Consensus 184 yg~~~~~~g~~~~~y~~~l~~~~~ 207 (523)
. -.. -...+..++.|+++|.-
T Consensus 148 ~-lv~--~p~s~N~f~~w~~emy~ 168 (587)
T COG3934 148 P-LVE--APISVNNFWDWSGEMYA 168 (587)
T ss_pred c-ccc--ccCChhHHHHHHHHHHH
Confidence 2 221 12467899999999974
|
|
| >TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.9 Score=51.74 Aligned_cols=167 Identities=17% Similarity=0.168 Sum_probs=85.1
Q ss_pred EeeCCCCCc-cchHHHH----HHHHhCCCCEEEE-ccccCcCCCCCcee----------eccCcchHHHHHHHHHHcCCE
Q 009890 47 SIHYPRSTP-EMWPDLI----QKSKDGGLDVIET-YVFWNLHEPVRNQY----------NFEGRYDLVKFVKLVAEAGLY 110 (523)
Q Consensus 47 ~iHy~R~~~-~~W~d~l----~k~Ka~GlN~V~t-YvfWn~HEp~~G~y----------dF~G~~dL~~fl~la~~~GL~ 110 (523)
|+|..-..+ --++..+ .-+|++|+|+|.+ .|+..-.... --| .|.+..||.+|++.|+++||.
T Consensus 143 e~hv~~~~~~g~~~~i~~~l~dyl~~LGvt~i~L~Pi~e~~~~~~-wGY~~~~y~~~~~~~Gt~~dlk~lV~~~H~~Gi~ 221 (613)
T TIGR01515 143 ELHLGSWRHGLSYRELADQLIPYVKELGFTHIELLPVAEHPFDGS-WGYQVTGYYAPTSRFGTPDDFMYFVDACHQAGIG 221 (613)
T ss_pred EEehhhccCCCCHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCC-CCCCcccCcccccccCCHHHHHHHHHHHHHCCCE
Confidence 566533322 2344433 5669999999998 6764311100 012 355567999999999999999
Q ss_pred EEEecCceecc-----ccCCCCCCccccCCCC---------eeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceE
Q 009890 111 AHLRIGPYVCA-----EWNFGGFPLWLHFIPG---------IQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPII 176 (523)
Q Consensus 111 Vilr~GPyi~a-----Ew~~GG~P~WL~~~p~---------i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII 176 (523)
|||-.=+-=++ -+.+.|.|.|....+. ..+-..+|.-++++...++..++...=.++-..--..++
T Consensus 222 VilD~V~NH~~~~~~~~~~~~~~~~y~~~~~~~~~~~~w~~~~~~~~~~~Vr~~l~~~~~~W~~ey~iDG~R~D~v~~~~ 301 (613)
T TIGR01515 222 VILDWVPGHFPKDDHGLAEFDGTPLYEHKDPRDGEHWDWGTLIFDYGRPEVRNFLVANALYWAEFYHIDGLRVDAVASML 301 (613)
T ss_pred EEEEecccCcCCccchhhccCCCcceeccCCccCcCCCCCCceecCCCHHHHHHHHHHHHHHHHHhCCcEEEEcCHHHhh
Confidence 99885321111 1122233333222110 123344555444444444444333221132221112333
Q ss_pred eccc--------cccccccccccCcccHHHHHHHHHHHHhcCCCcceEE
Q 009890 177 LSQI--------ENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVM 217 (523)
Q Consensus 177 ~~QI--------ENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~ 217 (523)
-++- .||++... ...+..|++.+.+.+++..-++-+|.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~---~~~~~~fl~~~~~~v~~~~p~~~lia 347 (613)
T TIGR01515 302 YLDYSRDEGEWSPNEDGGRE---NLEAVDFLRKLNQTVYEAFPGVVTIA 347 (613)
T ss_pred hhccccccccccccccCCcC---ChHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 2221 24443211 12357899999999988776664443
|
A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here. |
| >TIGR00542 hxl6Piso_put hexulose-6-phosphate isomerase, putative | Back alignment and domain information |
|---|
Probab=93.73 E-value=1.1 Score=45.18 Aligned_cols=132 Identities=16% Similarity=0.233 Sum_probs=77.9
Q ss_pred ccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEE-EecCceeccccCCCCCCcccc
Q 009890 55 PEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAH-LRIGPYVCAEWNFGGFPLWLH 133 (523)
Q Consensus 55 ~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vi-lr~GPyi~aEw~~GG~P~WL~ 133 (523)
..-|++.|+.+++.|++.|++.+ +.. ...++..+++ ..++..+.++++++||.|. +.+++ .+.+|
T Consensus 15 ~~~~~e~l~~~~~~G~~~VEl~~-~~~-~~~~~~~~~~-~~~~~~~~~~l~~~gl~i~~~~~~~-------~~~~~---- 80 (279)
T TIGR00542 15 GECWLERLQLAKTCGFDFVEMSV-DET-DDRLSRLDWS-REQRLALVNAIIETGVRIPSMCLSA-------HRRFP---- 80 (279)
T ss_pred CCCHHHHHHHHHHcCCCEEEEec-CCc-cchhhccCCC-HHHHHHHHHHHHHcCCCceeeecCC-------CccCc----
Confidence 46699999999999999999953 222 2223444554 3468899999999999875 44331 11111
Q ss_pred CCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccC---cccHHHHHHHHHHHHhcC
Q 009890 134 FIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYG---AAGKSYIKWAAGMALSLD 210 (523)
Q Consensus 134 ~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g---~~~~~y~~~l~~~~~~~g 210 (523)
+-..|+.-++...+.+++.++..+ .+ |.++|.+- ..++.. ..... ..-.+.++.+.+.|++.|
T Consensus 81 ------l~~~~~~~r~~~~~~~~~~i~~a~--~l----G~~~v~~~-~~~~~~-~~~~~~~~~~~~~~l~~l~~~A~~~G 146 (279)
T TIGR00542 81 ------LGSKDKAVRQQGLEIMEKAIQLAR--DL----GIRTIQLA-GYDVYY-EEHDEETRRRFREGLKEAVELAARAQ 146 (279)
T ss_pred ------CCCcCHHHHHHHHHHHHHHHHHHH--Hh----CCCEEEec-Cccccc-CcCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 112345556666677777777777 22 55666542 111100 00000 012355677788888888
Q ss_pred CCcc
Q 009890 211 TGVP 214 (523)
Q Consensus 211 ~~vP 214 (523)
+.+-
T Consensus 147 v~l~ 150 (279)
T TIGR00542 147 VTLA 150 (279)
T ss_pred CEEE
Confidence 7653
|
This family is conserved at better than 40 % identity among the four known examples from three species: Escherichia coli (SgbU and SgaU), Haemophilus influenzae, and Mycoplasma pneumoniae. The rarity of the family, high level of conservation, and proposed catabolic role suggests lateral transfer may be a part of the evolutionary history of this protein. |
| >PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=93.31 E-value=0.45 Score=52.52 Aligned_cols=69 Identities=20% Similarity=0.339 Sum_probs=44.4
Q ss_pred EEEeeCCCCCccchHHHHHHHH-hCCCCEEEEc-cc---cCcC-C-CCCc--eeeccCcchHHHHHHHHHHcCCEEEEec
Q 009890 45 SGSIHYPRSTPEMWPDLIQKSK-DGGLDVIETY-VF---WNLH-E-PVRN--QYNFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 45 sG~iHy~R~~~~~W~d~l~k~K-a~GlN~V~tY-vf---Wn~H-E-p~~G--~ydF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
-|+-|.....++.|+..|+.++ +.|+.-||+. +| .... + ...| .|||+ .||.++|...+.||+-.+.+
T Consensus 28 ~~~g~a~~~l~~~~q~~l~~~~~~~gf~yvR~h~l~~ddm~~~~~~~~~~~~~Ynf~---~lD~i~D~l~~~g~~P~vel 104 (486)
T PF01229_consen 28 VGSGRANLLLRADWQEQLRELQEELGFRYVRFHGLFSDDMMVYSESDEDGIPPYNFT---YLDQILDFLLENGLKPFVEL 104 (486)
T ss_dssp EEES-GGGGGBHHHHHHHHHHHCCS--SEEEES-TTSTTTT-EEEEETTEEEEE--H---HHHHHHHHHHHCT-EEEEEE
T ss_pred cCCCchHHHhhHHHHHHHHHHHhccCceEEEEEeeccCchhhccccccCCCCcCChH---HHHHHHHHHHHcCCEEEEEE
Confidence 3445555567888999999997 6899999974 22 1111 1 1223 39999 99999999999999988887
Q ss_pred C
Q 009890 116 G 116 (523)
Q Consensus 116 G 116 (523)
|
T Consensus 105 ~ 105 (486)
T PF01229_consen 105 G 105 (486)
T ss_dssp -
T ss_pred E
Confidence 6
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 39 GH39 from CAZY comprises enzymes with several known activities; alpha-L-iduronidase (3.2.1.76 from EC); beta-xylosidase (3.2.1.37 from EC). The most highly conserved regions in these enzymes are located in their N-terminal sections. These contain a glutamic acid residue which, on the basis of similarities with other families of glycosyl hydrolases [], probably acts as the proton donor in their catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BS9_D 2BFG_E 1W91_B 1UHV_D 1PX8_A. |
| >PRK05402 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=92.66 E-value=1.7 Score=50.59 Aligned_cols=51 Identities=25% Similarity=0.361 Sum_probs=36.9
Q ss_pred HHHHHhCCCCEEEE-ccc-------cCc-----CCCCCceeeccCcchHHHHHHHHHHcCCEEEEec
Q 009890 62 IQKSKDGGLDVIET-YVF-------WNL-----HEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 62 l~k~Ka~GlN~V~t-Yvf-------Wn~-----HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
|.-+|++|+|+|.. .|+ |.+ ..+.| .|.+..||.+|++.|+++||.|||-.
T Consensus 272 ~~ylk~LGv~~i~L~Pi~e~~~~~~~GY~~~~y~ai~~---~~Gt~~dfk~lV~~~H~~Gi~VilD~ 335 (726)
T PRK05402 272 IPYVKEMGFTHVELLPIAEHPFDGSWGYQPTGYYAPTS---RFGTPDDFRYFVDACHQAGIGVILDW 335 (726)
T ss_pred HHHHHHcCCCEEEECCcccCCCCCCCCCCcccCCCcCc---ccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 35569999999997 453 221 11111 25556799999999999999999984
|
|
| >PRK14706 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=92.27 E-value=2.1 Score=49.14 Aligned_cols=51 Identities=18% Similarity=0.200 Sum_probs=36.1
Q ss_pred HHHHHhCCCCEEEE-ccc-------cCcC-----CCCCceeeccCcchHHHHHHHHHHcCCEEEEec
Q 009890 62 IQKSKDGGLDVIET-YVF-------WNLH-----EPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 62 l~k~Ka~GlN~V~t-Yvf-------Wn~H-----Ep~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
+.-+|++|+|+|+. .|. |.+. .|.+ .|.+..|+.+|++.|+++||.|||-.
T Consensus 174 ~~ylk~lG~t~velmPv~e~~~~~~wGY~~~~~~~~~~---~~g~~~~~~~lv~~~H~~gi~VilD~ 237 (639)
T PRK14706 174 GEYVTYMGYTHVELLGVMEHPFDGSWGYQVTGYYAPTS---RLGTPEDFKYLVNHLHGLGIGVILDW 237 (639)
T ss_pred HHHHHHcCCCEEEccchhcCCCCCCCCcCccccccccc---ccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 35689999999996 231 3321 1111 23445799999999999999999874
|
|
| >smart00642 Aamy Alpha-amylase domain | Back alignment and domain information |
|---|
Probab=91.10 E-value=0.6 Score=44.30 Aligned_cols=65 Identities=15% Similarity=0.126 Sum_probs=43.5
Q ss_pred hHHHHHHHHhCCCCEEEEccccCcCC-------CCCcee-----eccCcchHHHHHHHHHHcCCEEEEecCceeccc
Q 009890 58 WPDLIQKSKDGGLDVIETYVFWNLHE-------PVRNQY-----NFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAE 122 (523)
Q Consensus 58 W~d~l~k~Ka~GlN~V~tYvfWn~HE-------p~~G~y-----dF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aE 122 (523)
+.+.|.-+|++|+|+|.+-=++..-+ -.+..| .|....++.++++.|+++||.||+-.=|-=++.
T Consensus 21 i~~~l~yl~~lG~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~NH~~~ 97 (166)
T smart00642 21 IIEKLDYLKDLGVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVINHTSD 97 (166)
T ss_pred HHHHHHHHHHCCCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECCCCCCC
Confidence 44556669999999998753322111 112222 455668999999999999999999875433333
|
|
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
Probab=90.76 E-value=1 Score=47.01 Aligned_cols=117 Identities=16% Similarity=0.186 Sum_probs=69.0
Q ss_pred CccchHHHHHHHHhCCCCEEEEccccC-------cCCCC-------CceeeccCcchHHHHHHHHHHcCCEEEEecCcee
Q 009890 54 TPEMWPDLIQKSKDGGLDVIETYVFWN-------LHEPV-------RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYV 119 (523)
Q Consensus 54 ~~~~W~d~l~k~Ka~GlN~V~tYvfWn-------~HEp~-------~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi 119 (523)
.++.-.+.|+++|++|+|+|=.=|-+. -.+|. +|. + -|..-|..+|+.|++.||.|+..+ .+-
T Consensus 17 ~~~~~~~~l~~l~~~~~N~V~~qVr~~gda~Y~S~~~p~s~~~~g~~~~-~-pg~DpL~~~I~eaHkrGlevHAW~-~~~ 93 (311)
T PF02638_consen 17 SKEQIDEMLDDLKSAGFNAVFVQVRPRGDALYPSDIEPWSGYLTGKQGK-D-PGFDPLEFMIEEAHKRGLEVHAWF-RVG 93 (311)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEEEeCcEEEecccccccccccCCCCCC-C-CCccHHHHHHHHHHHcCCEEEEEE-Eee
Confidence 667788999999999999997555432 22221 111 0 022259999999999999999776 111
Q ss_pred ccccC----CCCCCcccc-CCCCeeeec----CCh----hHHHHHHHHHHHHHHHHH-hcccccccCCceEecccc
Q 009890 120 CAEWN----FGGFPLWLH-FIPGIQFRT----DNE----PFKAEMQRFTAKIVDMMK-QEKLYASQGGPIILSQIE 181 (523)
Q Consensus 120 ~aEw~----~GG~P~WL~-~~p~i~~Rt----~d~----~fl~~~~~~~~~i~~~ik-~~~l~~~~gGpII~~QIE 181 (523)
..--. .-..|.|+. +.|+..... .+. |-..++++|+..++..+. ++ +|=++|++
T Consensus 94 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Eiv~~Y--------dvDGIhlD 161 (311)
T PF02638_consen 94 FNAPDVSHILKKHPEWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVKEIVKNY--------DVDGIHLD 161 (311)
T ss_pred cCCCchhhhhhcCchhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHHHHHhcC--------CCCeEEec
Confidence 11001 112577875 455532332 111 224677888777666554 33 35566766
|
|
| >PRK13210 putative L-xylulose 5-phosphate 3-epimerase; Reviewed | Back alignment and domain information |
|---|
Probab=90.72 E-value=2.9 Score=42.00 Aligned_cols=133 Identities=17% Similarity=0.219 Sum_probs=76.2
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEE-EecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAH-LRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vi-lr~GPyi~aEw~~GG~P~WL~~ 134 (523)
--|++.++.++++|++.|++.+. ..|+ .....+|+ ..++..+.++++++||.|. +.++ +.-.+
T Consensus 16 ~~~~e~~~~~~~~G~~~iEl~~~-~~~~-~~~~~~~~-~~~~~~l~~~l~~~Gl~i~~~~~~----------~~~~~--- 79 (284)
T PRK13210 16 LSWEERLVFAKELGFDFVEMSVD-ESDE-RLARLDWS-KEERLSLVKAIYETGVRIPSMCLS----------GHRRF--- 79 (284)
T ss_pred CCHHHHHHHHHHcCCCeEEEecC-Cccc-ccccccCC-HHHHHHHHHHHHHcCCCceEEecc----------cccCc---
Confidence 36999999999999999999642 2222 01122333 3478999999999999876 3222 11000
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccccc-ccCcccHHHHHHHHHHHHhcCCCc
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDS-AYGAAGKSYIKWAAGMALSLDTGV 213 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~-~~g~~~~~y~~~l~~~~~~~g~~v 213 (523)
.+.+.|+..++...+.++++++..+. | |.+.|-+.--..+..... ..-..-.+.++.+.++|++.|+.+
T Consensus 80 ----~~~~~d~~~r~~~~~~~~~~i~~a~~--l----G~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l 149 (284)
T PRK13210 80 ----PFGSRDPATRERALEIMKKAIRLAQD--L----GIRTIQLAGYDVYYEEKSEETRQRFIEGLAWAVEQAAAAQVML 149 (284)
T ss_pred ----CCCCCCHHHHHHHHHHHHHHHHHHHH--h----CCCEEEECCcccccccccHHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 12335566666666677777777773 2 445554321000000000 000112356788888898888765
Q ss_pred c
Q 009890 214 P 214 (523)
Q Consensus 214 P 214 (523)
-
T Consensus 150 ~ 150 (284)
T PRK13210 150 A 150 (284)
T ss_pred E
Confidence 3
|
|
| >PRK12568 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=89.97 E-value=6 Score=46.11 Aligned_cols=54 Identities=22% Similarity=0.310 Sum_probs=39.2
Q ss_pred HHHHHHhCCCCEEEE-ccc-------cCcC-----CCCCceeeccCcchHHHHHHHHHHcCCEEEEecCc
Q 009890 61 LIQKSKDGGLDVIET-YVF-------WNLH-----EPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGP 117 (523)
Q Consensus 61 ~l~k~Ka~GlN~V~t-Yvf-------Wn~H-----Ep~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GP 117 (523)
.|.-+|++|+|+|+. .|+ |.+. .|.+ .|.+..++.+|++.|+++||.|||-.=|
T Consensus 275 ll~ylk~LGvt~I~LmPi~e~~~~~~wGY~~~~~~a~~~---~~G~~~dfk~lV~~~H~~Gi~VIlD~V~ 341 (730)
T PRK12568 275 LIPYVQQLGFTHIELLPITEHPFGGSWGYQPLGLYAPTA---RHGSPDGFAQFVDACHRAGIGVILDWVS 341 (730)
T ss_pred HHHHHHHcCCCEEEECccccCCCCCCCCCCCCcCCccCc---ccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 457789999999996 342 4321 1111 3555679999999999999999998533
|
|
| >PRK09936 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=89.92 E-value=3.8 Score=42.52 Aligned_cols=59 Identities=24% Similarity=0.364 Sum_probs=47.4
Q ss_pred CCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCc-chHHHHHHHHHHcCCEEEEec
Q 009890 51 PRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGR-YDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 51 ~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~-~dL~~fl~la~~~GL~Vilr~ 115 (523)
.+++++.|+.+++.+|+.|++++= |-|..- |.=||.|. -.|.+.++.|++.||.|++..
T Consensus 33 ~~~~~~qWq~~~~~~~~~G~~tLi--vQWt~y----G~~~fg~~~g~La~~l~~A~~~Gl~v~vGL 92 (296)
T PRK09936 33 SQVTDTQWQGLWSQLRLQGFDTLV--VQWTRY----GDADFGGQRGWLAKRLAAAQQAGLKLVVGL 92 (296)
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEE--EEeeec----cCCCcccchHHHHHHHHHHHHcCCEEEEcc
Confidence 467999999999999999999874 455443 11188875 479999999999999999854
|
|
| >cd00019 AP2Ec AP endonuclease family 2; These endonucleases play a role in DNA repair | Back alignment and domain information |
|---|
Probab=89.42 E-value=3.7 Score=41.43 Aligned_cols=98 Identities=11% Similarity=0.168 Sum_probs=59.1
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHc-CCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEA-GLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~-GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
.-|++.|+.+|++|++.|++-+....-...+ .....++..+.++++++ ++.+.+- +||. +
T Consensus 10 ~~l~~~l~~a~~~G~d~vEl~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~i~~~-~~~~------------~-- 70 (279)
T cd00019 10 FGLENALKRAKEIGFDTVAMFLGNPRSWLSR----PLKKERAEKFKAIAEEGPSICLSVH-APYL------------I-- 70 (279)
T ss_pred ccHHHHHHHHHHcCCCEEEEEcCCCCccCCC----CCCHHHHHHHHHHHHHcCCCcEEEE-cCce------------e--
Confidence 6799999999999999999976432111111 11346899999999999 6665543 2321 0
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccc
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIEN 182 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIEN 182 (523)
.+...++.-++...+.+++.++..+. | |-+.|.+...+
T Consensus 71 ----~~~~~~~~~r~~~~~~~~~~i~~A~~--l----G~~~v~~~~g~ 108 (279)
T cd00019 71 ----NLASPDKEKREKSIERLKDEIERCEE--L----GIRLLVFHPGS 108 (279)
T ss_pred ----ccCCCCHHHHHHHHHHHHHHHHHHHH--c----CCCEEEECCCC
Confidence 12223444445555556666666662 2 44566555443
|
Cleave phosphodiester bonds at apurinic or apyrimidinic sites; the alignment also contains hexulose-6-phosphate isomerases, enzymes that catalyze the epimerization of D-arabino-6-hexulose 3-phosphate to D-fructose 6-phosphate, via cleaving the phosphoesterbond with the sugar. |
| >PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=89.37 E-value=32 Score=36.41 Aligned_cols=234 Identities=14% Similarity=0.127 Sum_probs=107.5
Q ss_pred HHHHHHHhCCCCEEEE-------ccccCcCCCCCceeeccCcch-HHHHHHHHHHcCCEEEEecCceec-cccCCCCCCc
Q 009890 60 DLIQKSKDGGLDVIET-------YVFWNLHEPVRNQYNFEGRYD-LVKFVKLVAEAGLYAHLRIGPYVC-AEWNFGGFPL 130 (523)
Q Consensus 60 d~l~k~Ka~GlN~V~t-------YvfWn~HEp~~G~ydF~G~~d-L~~fl~la~~~GL~Vilr~GPyi~-aEw~~GG~P~ 130 (523)
.-.+.+|++|+.-|=. +-.|...-..-..-+-.+.+| +..|.+.|+++||.+-+ |.+ ++|.....+.
T Consensus 95 qW~~~ak~aGakY~VlTakHHDGF~LW~S~~t~~~v~~~~~krDiv~El~~A~rk~Glk~G~----Y~S~~dw~~~~~~~ 170 (346)
T PF01120_consen 95 QWAKLAKDAGAKYVVLTAKHHDGFCLWPSKYTDYNVVNSGPKRDIVGELADACRKYGLKFGL----YYSPWDWHHPDYPP 170 (346)
T ss_dssp HHHHHHHHTT-SEEEEEEE-TT--BSS--TT-SSBGGGGGGTS-HHHHHHHHHHHTT-EEEE----EEESSSCCCTTTTS
T ss_pred HHHHHHHHcCCCEEEeehhhcCccccCCCCCCcccccCCCCCCCHHHHHHHHHHHcCCeEEE----EecchHhcCcccCC
Confidence 3467889999985532 223655433222222223456 66788999999998776 433 3665433332
Q ss_pred cccCCCCeeeecCChhHHHHHH-HHHHHHHHHHHhccc--ccccCCceEeccccccccccccccCcccHHHHHHHHHHHH
Q 009890 131 WLHFIPGIQFRTDNEPFKAEMQ-RFTAKIVDMMKQEKL--YASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMAL 207 (523)
Q Consensus 131 WL~~~p~i~~Rt~d~~fl~~~~-~~~~~i~~~ik~~~l--~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~ 207 (523)
-..... .......+.+.++++ .+..+|-+.+.+.++ ++-+||.- . .....-...+.++++
T Consensus 171 ~~~~~~-~~~~~~~~~~~~~~~~~~~~ql~EL~~~Y~~d~lWfDg~~~--------~--------~~~~~~~~~~~~~i~ 233 (346)
T PF01120_consen 171 DEEGDE-NGPADGPGNWQRYYNEYWLAQLRELLTRYKPDILWFDGGWP--------D--------PDEDWDSAELYNWIR 233 (346)
T ss_dssp SCHCHH-CC--HCCHHHHHHHHHHHHHHHHHHHHCSTESEEEEESTTS--------C--------CCTHHHHHHHHHHHH
T ss_pred CccCCc-ccccccchhhHhHhhhhhHHHHHHHHhCCCcceEEecCCCC--------c--------cccccCHHHHHHHHH
Confidence 211100 000112334444444 444555555553321 11122110 0 111222366777777
Q ss_pred hcCCCcceEEccCCCCCCccccCCCCccc-CCCCCC-CCCCCceEeeec-cccccccCCCCCCCCHHHHHHHHHHHHhcC
Q 009890 208 SLDTGVPWVMCQQSDAPDPIINTCNGFYC-DQFTPN-SNNKPKMWTENW-SGWFLSFGGAVPYRPVEDLAFAVARFFQRG 284 (523)
Q Consensus 208 ~~g~~vP~~~~~~~~~p~~vi~~~ng~~~-~~~~~~-~~~~P~~~tE~~-~Gwf~~wG~~~~~r~~~d~~~~~~~~~~~g 284 (523)
+++-++-+............ .+.+ +...+. ....|.-.+.-. .+||- =-.....++++.+...+....++|
T Consensus 234 ~~qp~~ii~~r~~~~~~~~~-----d~~~~E~~~~~~~~~~pwE~~~ti~~~W~y-~~~~~~~ks~~~li~~l~~~vs~n 307 (346)
T PF01120_consen 234 KLQPDVIINNRWGGNEQGDG-----DYNTPERGIPGEIQGRPWETCTTIGPSWGY-NTPDEKYKSADELIDILVDSVSRN 307 (346)
T ss_dssp HHSTTSEEECCCSSCSSCCB-----SCCEECTTBTTTEEESEEEEEEESSSSSS--CGGGCGS--HHHHHHHHHHHHTBT
T ss_pred HhCCeEEEecccCCCCCccc-----cccchhccCCCCCCCCCccccCcCCCCCcc-cCCCCCcCCHHHHHHHHHHHhccC
Confidence 77666533221111110000 0000 111111 111232222222 34442 011234568888888888889999
Q ss_pred Cee-eeeeeeccCCCCCCCCCCCcccccccCCCCCCcCCCCCChhHHHHHHHHHHHHHhhhcc
Q 009890 285 GTF-QNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAAL 346 (523)
Q Consensus 285 ~s~-~nyYM~hGGTNfG~~~G~~~~~TSYDy~Api~E~G~~~~pKy~~lk~lh~~i~~~~~~L 346 (523)
|++ +|. +.+.+|.+.++.-..||++...|+..+.++
T Consensus 308 gnlLLNi--------------------------gP~~dG~ip~~~~~~L~e~G~Wl~~ngeaI 344 (346)
T PF01120_consen 308 GNLLLNI--------------------------GPDPDGTIPEEQVERLREIGDWLKVNGEAI 344 (346)
T ss_dssp EEEEEEE-----------------------------TTSS--HHHHHHHHHHHHHHHHHGGGT
T ss_pred ceEEEec--------------------------CCCCCCCcCHHHHHHHHHHHHHHHhccccc
Confidence 884 443 234668887778889999999999887765
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Family 29 (GH29 from CAZY) encompasses alpha-L-fucosidases (3.2.1.51 from EC) [], which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration []. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain []. Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell []. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity []. ; GO: 0004560 alpha-L-fucosidase activity, 0005975 carbohydrate metabolic process; PDB: 3EYP_B 2ZX6_A 2ZWY_B 2ZX8_B 2WSP_A 2ZXA_A 2ZWZ_B 1ODU_B 1HL9_A 2ZX5_B .... |
| >PLN02447 1,4-alpha-glucan-branching enzyme | Back alignment and domain information |
|---|
Probab=88.77 E-value=11 Score=44.29 Aligned_cols=61 Identities=15% Similarity=0.186 Sum_probs=43.8
Q ss_pred cchHHHHHHHHhCCCCEEEEc-cc-------cCcCCC---CCceeeccCcchHHHHHHHHHHcCCEEEEecCc
Q 009890 56 EMWPDLIQKSKDGGLDVIETY-VF-------WNLHEP---VRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGP 117 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tY-vf-------Wn~HEp---~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GP 117 (523)
+.|++.|..+|++|+|+|++- |+ |.++-. .+ .-.|.+..+|.+|++.|+++||.|||-.=|
T Consensus 251 ~~~~~~L~ylk~LG~t~I~LmPi~e~~~~~~wGY~~~~~fa~-~~~~Gtp~dlk~LVd~aH~~GI~VilDvV~ 322 (758)
T PLN02447 251 EFADDVLPRIKALGYNAVQLMAIQEHAYYGSFGYHVTNFFAV-SSRSGTPEDLKYLIDKAHSLGLRVLMDVVH 322 (758)
T ss_pred HHHHHHHHHHHHcCCCEEEECCccccCCCCCCCcCcccCccc-ccccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 447888999999999999962 32 433211 01 113555678999999999999999988533
|
|
| >PF01261 AP_endonuc_2: Xylose isomerase-like TIM barrel; InterPro: IPR012307 This TIM alpha/beta barrel structure is found in xylose isomerase (P19148 from SWISSPROT) and in endonuclease IV (P12638 from SWISSPROT, 3 | Back alignment and domain information |
|---|
Probab=88.65 E-value=1.1 Score=41.96 Aligned_cols=125 Identities=15% Similarity=0.152 Sum_probs=73.5
Q ss_pred HHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeee
Q 009890 62 IQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFR 141 (523)
Q Consensus 62 l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~R 141 (523)
|+.++++|++.|+............ ..+++++.++++++||.++.--.+.. |.. +....+
T Consensus 1 l~~~~~~G~~~vE~~~~~~~~~~~~-------~~~~~~~~~~~~~~gl~i~~~~~~~~-----------~~~--~~~~~~ 60 (213)
T PF01261_consen 1 LEAAAEAGFDGVELRFDDGQPWDEK-------DDEAEELRRLLEDYGLKIASLHPPTN-----------FWS--PDEENG 60 (213)
T ss_dssp HHHHHHTTHSEEEEEHHHHSHHTHH-------HHHHHHHHHHHHHTTCEEEEEEEEES-----------SSC--TGTTST
T ss_pred ChHHHHcCCCEEEEecCCCcccccc-------hHHHHHHHHHHHHcCCeEEEEecccc-----------ccc--cccccc
Confidence 5789999999999976533222111 34799999999999999653221110 000 111123
Q ss_pred cCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccc--cccccccc-ccCcccHHHHHHHHHHHHhcCCCc
Q 009890 142 TDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIE--NEYGNIDS-AYGAAGKSYIKWAAGMALSLDTGV 213 (523)
Q Consensus 142 t~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIE--NEyg~~~~-~~g~~~~~y~~~l~~~~~~~g~~v 213 (523)
+.+++ .+...+.+.+.++..+. | |.+.|.+..- +....... ..-+.-.+.++.|.+++.+.|+.+
T Consensus 61 ~~~~~-r~~~~~~~~~~i~~a~~--l----g~~~i~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i 128 (213)
T PF01261_consen 61 SANDE-REEALEYLKKAIDLAKR--L----GAKYIVVHSGRYPSGPEDDTEENWERLAENLRELAEIAEEYGVRI 128 (213)
T ss_dssp TSSSH-HHHHHHHHHHHHHHHHH--H----TBSEEEEECTTESSSTTSSHHHHHHHHHHHHHHHHHHHHHHTSEE
T ss_pred Ccchh-hHHHHHHHHHHHHHHHH--h----CCCceeecCcccccccCCCHHHHHHHHHHHHHHHHhhhhhhcceE
Confidence 34444 77777788888888883 3 5566666644 22211100 000123456788888888888664
|
1.21.2 from EC). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae []. ; PDB: 3KWS_B 3DX5_A 3CQH_B 3CQI_A 3CQK_A 3CQJ_B 2G0W_B 1DXI_A 2ZDS_D 3TVA_B .... |
| >PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea | Back alignment and domain information |
|---|
Probab=87.33 E-value=0.9 Score=48.48 Aligned_cols=72 Identities=26% Similarity=0.268 Sum_probs=47.9
Q ss_pred EEEEeeCCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceecc
Q 009890 44 ISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCA 121 (523)
Q Consensus 44 ~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~a 121 (523)
+|=++++...+.+.....|++|++.|+..|=| ++|.|+...=+. ...+..+++.|++.||.|++-+.|=+..
T Consensus 2 lGiSvY~~~~~~~~~~~yi~~a~~~Gf~~iFT----SL~ipe~~~~~~--~~~~~~l~~~a~~~~~~v~~Disp~~l~ 73 (357)
T PF05913_consen 2 LGISVYPGQSSFEENKAYIEKAAKYGFKRIFT----SLHIPEDDPEDY--LERLKELLKLAKELGMEVIADISPKVLK 73 (357)
T ss_dssp EEEEE-CCCS-HHHHHHHHHHHHCTTEEEEEE----EE---------H--HHHHHHHHHHHHHCT-EEEEEE-CCHHH
T ss_pred cEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEC----CCCcCCCCHHHH--HHHHHHHHHHHHHCCCEEEEECCHHHHH
Confidence 45567777778889999999999999988777 678888532121 1378899999999999999999875443
|
The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A. |
| >PRK14705 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=87.02 E-value=13 Score=45.93 Aligned_cols=56 Identities=20% Similarity=0.198 Sum_probs=38.7
Q ss_pred HHHHHHHhCCCCEEEE-ccc-------cCcCC--CCCceeeccCcchHHHHHHHHHHcCCEEEEec
Q 009890 60 DLIQKSKDGGLDVIET-YVF-------WNLHE--PVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 60 d~l~k~Ka~GlN~V~t-Yvf-------Wn~HE--p~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
+.|.-+|++|+|+|+. .|+ |.+.- ...=.=.|.+-.|+..|++.|+++||.|||-.
T Consensus 770 ~lldYlk~LGvt~IeLmPv~e~p~~~swGY~~~~y~ap~~ryGt~~dfk~lVd~~H~~GI~VILD~ 835 (1224)
T PRK14705 770 ELVDYVKWLGFTHVEFMPVAEHPFGGSWGYQVTSYFAPTSRFGHPDEFRFLVDSLHQAGIGVLLDW 835 (1224)
T ss_pred HHHHHHHHhCCCEEEECccccCCCCCCCCCCccccCCcCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 3467889999999996 342 43210 00001134556799999999999999999874
|
|
| >PRK12313 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=86.99 E-value=8.9 Score=43.90 Aligned_cols=52 Identities=21% Similarity=0.365 Sum_probs=38.3
Q ss_pred HHHHHHhCCCCEEEE-ccc-------cCc-----CCCCCceeeccCcchHHHHHHHHHHcCCEEEEec
Q 009890 61 LIQKSKDGGLDVIET-YVF-------WNL-----HEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 61 ~l~k~Ka~GlN~V~t-Yvf-------Wn~-----HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
+|.-+|++|+|+|.. .|+ |.+ ..+.| .|.+..||.+|++.|+++||.|||-.
T Consensus 176 ll~yl~~LGv~~i~L~Pi~~~~~~~~~GY~~~~y~~i~~---~~Gt~~d~k~lv~~~H~~Gi~VilD~ 240 (633)
T PRK12313 176 LIPYVKEMGYTHVEFMPLMEHPLDGSWGYQLTGYFAPTS---RYGTPEDFMYLVDALHQNGIGVILDW 240 (633)
T ss_pred HHHHHHHcCCCEEEeCchhcCCCCCCCCCCCcCcCcCCC---CCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 357889999999995 453 321 11111 35566799999999999999999984
|
|
| >PF14307 Glyco_tran_WbsX: Glycosyltransferase WbsX | Back alignment and domain information |
|---|
Probab=86.67 E-value=7.3 Score=41.18 Aligned_cols=141 Identities=17% Similarity=0.233 Sum_probs=89.4
Q ss_pred CCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHH---HcCCEEEEecCceeccccCCCCCC
Q 009890 53 STPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVA---EAGLYAHLRIGPYVCAEWNFGGFP 129 (523)
Q Consensus 53 ~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~---~~GL~Vilr~GPyi~aEw~~GG~P 129 (523)
..|+..+..++.||+.||+.--.|--| |.|++-|++-++..- +.+|..+|. |.+-.|..
T Consensus 55 ~~p~v~~~Q~~lA~~~GI~gF~~~~Yw-----------f~gk~lLe~p~~~~l~~~~~d~pFcl~---WAN~~w~~---- 116 (345)
T PF14307_consen 55 RDPEVMEKQAELAKEYGIDGFCFYHYW-----------FNGKRLLEKPLENLLASKEPDFPFCLC---WANENWTR---- 116 (345)
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEEeee-----------cCCchHHHHHHHHHHhcCCCCCcEEEE---ECCChhhh----
Confidence 477888999999999999999988755 457777877776654 334544443 12222311
Q ss_pred ccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCcccHHHHHHHHHHHHhc
Q 009890 130 LWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSL 209 (523)
Q Consensus 130 ~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~ 209 (523)
.|-.....+.+-..... .+..+++++.|++.+++..++--+|-||+++=--.+. ++-++.++.+++.|++.
T Consensus 117 ~w~g~~~~~l~~q~y~~-~~d~~~~~~~l~~~F~D~rYikVdGKPv~~Iy~p~~~--------pd~~~~~~~wr~~a~~~ 187 (345)
T PF14307_consen 117 RWDGRNNEILIEQKYSG-EDDWKEHFRYLLPYFKDPRYIKVDGKPVFLIYRPGDI--------PDIKEMIERWREEAKEA 187 (345)
T ss_pred ccCCCCccccccccCCc-hhHHHHHHHHHHHHhCCCCceeECCEEEEEEECcccc--------cCHHHHHHHHHHHHHHc
Confidence 12222122211111110 1224667788889999887777789999987322221 24678999999999999
Q ss_pred CCCcceEEccC
Q 009890 210 DTGVPWVMCQQ 220 (523)
Q Consensus 210 g~~vP~~~~~~ 220 (523)
|+.-+.+....
T Consensus 188 G~~giyii~~~ 198 (345)
T PF14307_consen 188 GLPGIYIIAVQ 198 (345)
T ss_pred CCCceEEEEEe
Confidence 99866554443
|
|
| >TIGR02631 xylA_Arthro xylose isomerase, Arthrobacter type | Back alignment and domain information |
|---|
Probab=86.49 E-value=14 Score=39.78 Aligned_cols=91 Identities=14% Similarity=0.134 Sum_probs=53.3
Q ss_pred CccchHHHHHHHHhCCCCEEEEc----cccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEE-ecCceeccccCCCCC
Q 009890 54 TPEMWPDLIQKSKDGGLDVIETY----VFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHL-RIGPYVCAEWNFGGF 128 (523)
Q Consensus 54 ~~~~W~d~l~k~Ka~GlN~V~tY----vfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vil-r~GPyi~aEw~~GG~ 128 (523)
++....+.+++++++|++.|+.. ++|..-..+. ..++.++-+++++.||.|.. -++-+.+..+..|
T Consensus 30 ~~~~~~e~i~~la~~GfdgVE~~~~dl~P~~~~~~e~-------~~~~~~lk~~L~~~GL~v~~v~~nl~~~~~~~~g-- 100 (382)
T TIGR02631 30 TALDPVEAVHKLAELGAYGVTFHDDDLIPFGAPPQER-------DQIVRRFKKALDETGLKVPMVTTNLFSHPVFKDG-- 100 (382)
T ss_pred CCcCHHHHHHHHHHhCCCEEEecccccCCCCCChhHH-------HHHHHHHHHHHHHhCCeEEEeeccccCCccccCC--
Confidence 33456799999999999999964 2222111000 23578899999999999763 3321111111111
Q ss_pred CccccCCCCeeeecCChhHHHHHHHHHHHHHHHHH
Q 009890 129 PLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 129 P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
.+-+.|+..+++.-+.+++.++.-+
T Consensus 101 ----------~las~d~~vR~~ai~~~kraId~A~ 125 (382)
T TIGR02631 101 ----------GFTSNDRSVRRYALRKVLRNMDLGA 125 (382)
T ss_pred ----------CCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2334466666665555566666666
|
This model describes a D-xylose isomerase that is also active as a D-glucose isomerase. It is tetrameric and dependent on a divalent cation Mg2+, Co2+ or Mn2+ as characterized in Arthrobacter. Members of this family differ substantially from the D-xylose isomerases of family TIGR02630. |
| >TIGR03234 OH-pyruv-isom hydroxypyruvate isomerase | Back alignment and domain information |
|---|
Probab=86.19 E-value=10 Score=37.55 Aligned_cols=43 Identities=19% Similarity=0.245 Sum_probs=35.5
Q ss_pred chHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEE
Q 009890 57 MWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHL 113 (523)
Q Consensus 57 ~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vil 113 (523)
-+++.++++++.|++.|+....+ ..++..+.++++++||.+..
T Consensus 15 ~l~e~~~~~~e~G~~~vEl~~~~--------------~~~~~~l~~~l~~~gl~v~~ 57 (254)
T TIGR03234 15 PFLERFAAAAQAGFTGVEYLFPY--------------DWDAEALKARLAAAGLEQVL 57 (254)
T ss_pred CHHHHHHHHHHcCCCEEEecCCc--------------cCCHHHHHHHHHHcCCeEEE
Confidence 47899999999999999985422 13688899999999999864
|
This enzyme interconverts tartronate semi-aldehyde (TSA, aka 2-hydroxy 3-oxopropionate) and hydroxypyruvate. The E. coli enzyme has been characterized and found to be specific for TSA, contain no cofactors, and have a rather high Km for hydroxypyruvate of 12.5 mM. The gene is ofter found in association with glyoxalate carboligase (which produces TSA), but has been shown to have no effect on growth on glyoxalate when knocked out. This is consistent with the fact that the gene for tartronate semialdehyde reductase (glxR) is also associated and may have primary responsibility for the catabolism of TSA. |
| >PRK09441 cytoplasmic alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=85.91 E-value=1.3 Score=48.71 Aligned_cols=61 Identities=8% Similarity=0.202 Sum_probs=41.7
Q ss_pred ccchHH---HHHHHHhCCCCEEEE-ccccCc-----CCCCCce-e-------------eccCcchHHHHHHHHHHcCCEE
Q 009890 55 PEMWPD---LIQKSKDGGLDVIET-YVFWNL-----HEPVRNQ-Y-------------NFEGRYDLVKFVKLVAEAGLYA 111 (523)
Q Consensus 55 ~~~W~d---~l~k~Ka~GlN~V~t-YvfWn~-----HEp~~G~-y-------------dF~G~~dL~~fl~la~~~GL~V 111 (523)
.+.|.. .|.-+|++|+++|-+ .++-+. |--.+-- | .|....||.++++.|++.||+|
T Consensus 18 ~~~~~~I~~kldyl~~LGvtaIwl~P~~~~~~~~~~hgY~~~D~~~~~~~~~~~~id~~fGt~~dl~~Li~~~H~~Gi~v 97 (479)
T PRK09441 18 GKLWNRLAERAPELAEAGITAVWLPPAYKGTSGGYDVGYGVYDLFDLGEFDQKGTVRTKYGTKEELLNAIDALHENGIKV 97 (479)
T ss_pred ccHHHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCCeecccccccccccCCcCcCcCCHHHHHHHHHHHHHCCCEE
Confidence 355764 456679999999987 455432 2222211 1 2445678999999999999999
Q ss_pred EEec
Q 009890 112 HLRI 115 (523)
Q Consensus 112 ilr~ 115 (523)
|+-.
T Consensus 98 i~D~ 101 (479)
T PRK09441 98 YADV 101 (479)
T ss_pred EEEE
Confidence 9863
|
|
| >PF13200 DUF4015: Putative glycosyl hydrolase domain | Back alignment and domain information |
|---|
Probab=85.27 E-value=3 Score=43.84 Aligned_cols=113 Identities=20% Similarity=0.287 Sum_probs=70.2
Q ss_pred CccchHHHHHHHHhCCCCEEEEcc-------ccCcCCCCCceeecc-C-cchHHHHHHHHHHcCCEEEEecCceeccccC
Q 009890 54 TPEMWPDLIQKSKDGGLDVIETYV-------FWNLHEPVRNQYNFE-G-RYDLVKFVKLVAEAGLYAHLRIGPYVCAEWN 124 (523)
Q Consensus 54 ~~~~W~d~l~k~Ka~GlN~V~tYv-------fWn~HEp~~G~ydF~-G-~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~ 124 (523)
.++.-+..|+.+|+.|+|+|-+-| .+..-.|..-+..-. . ..|+.++++.++++|+|+|.|+=-|=- ..-
T Consensus 11 ~~~~~~~~~~~i~~t~lNavVIDvKdd~G~i~y~s~~~~~~~~ga~~~~i~D~~~l~~~l~e~gIY~IARIv~FkD-~~l 89 (316)
T PF13200_consen 11 SPERLDKLLDLIKRTELNAVVIDVKDDDGNITYDSQVPLAREIGAVKPYIKDLKALVKKLKEHGIYPIARIVVFKD-PVL 89 (316)
T ss_pred CHHHHHHHHHHHHhcCCceEEEEEecCCceEEecCCCchhhhcccccccccCHHHHHHHHHHCCCEEEEEEEEecC-hHH
Confidence 345678899999999999987643 344444433222111 2 269999999999999999999722110 000
Q ss_pred CCCCCccccC-CCCeeeecCC-----hhHHHHHHHHHHHHHHHHHhccc
Q 009890 125 FGGFPLWLHF-IPGIQFRTDN-----EPFKAEMQRFTAKIVDMMKQEKL 167 (523)
Q Consensus 125 ~GG~P~WL~~-~p~i~~Rt~d-----~~fl~~~~~~~~~i~~~ik~~~l 167 (523)
..--|.|-.. ..|-..|... .||.+++.+|.-.|++..++.++
T Consensus 90 a~~~pe~av~~~~G~~w~d~~~~~WvnP~~~evw~Y~i~IA~Eaa~~GF 138 (316)
T PF13200_consen 90 AEAHPEWAVKTKDGSVWRDNEGEAWVNPYSKEVWDYNIDIAKEAAKLGF 138 (316)
T ss_pred hhhChhhEEECCCCCcccCCCCCccCCCCCHHHHHHHHHHHHHHHHcCC
Confidence 0113444432 1121122211 26889999999999999986643
|
|
| >PRK13209 L-xylulose 5-phosphate 3-epimerase; Reviewed | Back alignment and domain information |
|---|
Probab=84.96 E-value=8 Score=38.95 Aligned_cols=127 Identities=18% Similarity=0.294 Sum_probs=74.6
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEE-EecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAH-LRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vi-lr~GPyi~aEw~~GG~P~WL~~ 134 (523)
--|.+.++.++++|++.|+..+. ..++ ....++++ ..++..+.++++++||.|. +.++.. ..+|
T Consensus 21 ~~~~e~~~~~~~~G~~~iEl~~~-~~~~-~~~~~~~~-~~~~~~l~~~l~~~gl~i~~~~~~~~-------~~~~----- 85 (283)
T PRK13209 21 ECWLEKLAIAKTAGFDFVEMSVD-ESDE-RLARLDWS-REQRLALVNALVETGFRVNSMCLSAH-------RRFP----- 85 (283)
T ss_pred CCHHHHHHHHHHcCCCeEEEecC-cccc-chhccCCC-HHHHHHHHHHHHHcCCceeEEecccc-------cccC-----
Confidence 35999999999999999999542 1111 01122333 2368899999999999875 332210 0011
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCc-------ccHHHHHHHHHHHH
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGA-------AGKSYIKWAAGMAL 207 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~-------~~~~y~~~l~~~~~ 207 (523)
+-+.|+.-++...+.+++.++..+ .| |.+.|.+. +.. ..++. .-.+.++.|.++|+
T Consensus 86 -----~~~~~~~~r~~~~~~~~~~i~~a~--~l----G~~~i~~~-----~~~-~~~~~~~~~~~~~~~~~l~~l~~~A~ 148 (283)
T PRK13209 86 -----LGSEDDAVRAQALEIMRKAIQLAQ--DL----GIRVIQLA-----GYD-VYYEQANNETRRRFIDGLKESVELAS 148 (283)
T ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHH--Hc----CCCEEEEC-----Ccc-ccccccHHHHHHHHHHHHHHHHHHHH
Confidence 112455556666677777777777 33 56666542 110 00111 11346777888888
Q ss_pred hcCCCcc
Q 009890 208 SLDTGVP 214 (523)
Q Consensus 208 ~~g~~vP 214 (523)
+.|+.+=
T Consensus 149 ~~GV~i~ 155 (283)
T PRK13209 149 RASVTLA 155 (283)
T ss_pred HhCCEEE
Confidence 8887653
|
|
| >PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=84.85 E-value=0.99 Score=44.90 Aligned_cols=56 Identities=20% Similarity=0.244 Sum_probs=38.7
Q ss_pred HHHHHHHhCCCCEEEEccccCcCC----CCCcee-----eccCcchHHHHHHHHHHcCCEEEEec
Q 009890 60 DLIQKSKDGGLDVIETYVFWNLHE----PVRNQY-----NFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 60 d~l~k~Ka~GlN~V~tYvfWn~HE----p~~G~y-----dF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
+.|.-+|++|+|+|.+-=++...+ -.+--| .|.+..++.++++.|++.||+|||-.
T Consensus 8 ~kLdyl~~lGv~~I~l~Pi~~~~~~~~gY~~~d~~~vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~ 72 (316)
T PF00128_consen 8 DKLDYLKDLGVNAIWLSPIFESPNGYHGYDPSDYYAVDPRFGTMEDFKELVDAAHKRGIKVILDV 72 (316)
T ss_dssp HTHHHHHHHTESEEEESS-EESSSSTTTTSESEEEEESTTTBHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCceecccccccccccccccceeeeccccccchhhhhhhhhhccccccceEEEee
Confidence 567788999999999853333211 111111 13445799999999999999999875
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A .... |
| >PRK09997 hydroxypyruvate isomerase; Provisional | Back alignment and domain information |
|---|
Probab=84.78 E-value=15 Score=36.61 Aligned_cols=42 Identities=21% Similarity=0.361 Sum_probs=34.7
Q ss_pred hHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEE
Q 009890 58 WPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHL 113 (523)
Q Consensus 58 W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vil 113 (523)
+++.|++++++|++.|++.. |. ..++..+.++++++||.+..
T Consensus 17 l~~~l~~~a~~Gf~~VEl~~------~~--------~~~~~~~~~~l~~~gl~~~~ 58 (258)
T PRK09997 17 FLARFEKAAQCGFRGVEFMF------PY--------DYDIEELKQVLASNKLEHTL 58 (258)
T ss_pred HHHHHHHHHHhCCCEEEEcC------CC--------CCCHHHHHHHHHHcCCcEEE
Confidence 68899999999999999932 11 13799999999999999864
|
|
| >PRK09856 fructoselysine 3-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=84.38 E-value=17 Score=36.34 Aligned_cols=130 Identities=13% Similarity=0.110 Sum_probs=71.3
Q ss_pred chHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCC
Q 009890 57 MWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIP 136 (523)
Q Consensus 57 ~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p 136 (523)
-+++.|+.++++|++.|++..-. .|+-.+ +++ ..++.++-++++++||.|.. .+|. .+++|..+.
T Consensus 14 ~l~~~l~~~~~~G~~~vEl~~~~-~~~~~~---~~~-~~~~~~l~~~~~~~gl~v~s-~~~~------~~~~~~~~~--- 78 (275)
T PRK09856 14 PIEHAFRDASELGYDGIEIWGGR-PHAFAP---DLK-AGGIKQIKALAQTYQMPIIG-YTPE------TNGYPYNMM--- 78 (275)
T ss_pred CHHHHHHHHHHcCCCEEEEccCC-cccccc---ccC-chHHHHHHHHHHHcCCeEEE-ecCc------ccCcCcccc---
Confidence 58999999999999999984211 011111 121 24688899999999998753 3321 123332221
Q ss_pred CeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccc-cc-ccccccCcccHHHHHHHHHHHHhcCCCc
Q 009890 137 GIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENE-YG-NIDSAYGAAGKSYIKWAAGMALSLDTGV 213 (523)
Q Consensus 137 ~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENE-yg-~~~~~~g~~~~~y~~~l~~~~~~~g~~v 213 (523)
..++.-+++..+.+++.++..+ .| |.+.|.+-.-.. +. .....+ +.-.+.++.|.+.|++.|+.+
T Consensus 79 -----~~~~~~r~~~~~~~~~~i~~a~--~l----Ga~~i~~~~~~~~~~~~~~~~~-~~~~~~l~~l~~~a~~~gv~l 145 (275)
T PRK09856 79 -----LGDEHMRRESLDMIKLAMDMAK--EM----NAGYTLISAAHAGYLTPPNVIW-GRLAENLSELCEYAENIGMDL 145 (275)
T ss_pred -----CCCHHHHHHHHHHHHHHHHHHH--Hh----CCCEEEEcCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHcCCEE
Confidence 1234444555556666666666 22 445544421111 00 000001 123356888888898887754
|
|
| >TIGR01531 glyc_debranch glycogen debranching enzymye | Back alignment and domain information |
|---|
Probab=83.18 E-value=4.4 Score=50.03 Aligned_cols=112 Identities=14% Similarity=0.239 Sum_probs=69.4
Q ss_pred eEEECCEEEEEEEEE---eeCCCC--CccchHHHHHHHHhCCCCEEEE-ccc-cCc-CCC--CCceee----c----cCc
Q 009890 33 AVVIGGKRRVLISGS---IHYPRS--TPEMWPDLIQKSKDGGLDVIET-YVF-WNL-HEP--VRNQYN----F----EGR 94 (523)
Q Consensus 33 ~l~idGk~~~l~sG~---iHy~R~--~~~~W~d~l~k~Ka~GlN~V~t-Yvf-Wn~-HEp--~~G~yd----F----~G~ 94 (523)
.|.|||++.+.+.+- -..+++ +-+.|++.|+.+|+.|+|+|-. .++ =.. ..| ..+++. | .|.
T Consensus 104 ~L~i~~~~~lPl~~i~iqTvlsK~mG~~~~w~~~L~~ik~lGyN~IhftPI~~~G~SnS~Ysi~Dyl~idP~~~~~~~~~ 183 (1464)
T TIGR01531 104 MLYINADKFLPLDSIALQTVLAKLLGPLSEWEPRLRVAKEKGYNMIHFTPLQELGGSNSCYSLYDQLQLNQHFKSQKDGK 183 (1464)
T ss_pred eeEECCCcccCcCceeeeeehhhhcCCHHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCccccchhhcChhhcccCCcH
Confidence 466777555554332 234554 6688999999999999999985 454 110 000 112222 3 366
Q ss_pred chHHHHHHHHHHc-CCEEEEecCceeccccCCCCC-CccccCCCCeeeecCChhHHHH
Q 009890 95 YDLVKFVKLVAEA-GLYAHLRIGPYVCAEWNFGGF-PLWLHFIPGIQFRTDNEPFKAE 150 (523)
Q Consensus 95 ~dL~~fl~la~~~-GL~Vilr~GPyi~aEw~~GG~-P~WL~~~p~i~~Rt~d~~fl~~ 150 (523)
.|+.++++.+++. ||.+|+-.= ||.=+. =.||.+.|..-+-..+.|+|+.
T Consensus 184 ~d~~~lV~~~h~~~Gm~~ilDvV------~NHTa~ds~Wl~eHPEa~Yn~~~sP~L~~ 235 (1464)
T TIGR01531 184 NDVQALVEKLHRDWNVLSITDIV------FNHTANNSPWLLEHPEAAYNCITSPHLRP 235 (1464)
T ss_pred HHHHHHHHHHHHhcCCEEEEEee------ecccccCCHHHHhChHhhcCCCCCchhhh
Confidence 7899999999986 999998751 333332 2488777764444444455443
|
glycogen debranching enzyme possesses two different catalytic activities; oligo-1,4--1,4-glucantransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). Site directed mutagenesis studies in S. cerevisiae indicate that the transferase and glucosidase activities are independent and located in different regions of the polypeptide chain. Proteins in this model belong to the larger alpha-amylase family. The model covers eukaryotic proteins with a seed composed of human, nematode and yeast sequences. Yeast seed sequence is well characterized. The model is quite rigorous; either query sequence yields large bit score or it fails to hit the model altogether. There doesn't appear to be any middle ground. |
| >PRK01060 endonuclease IV; Provisional | Back alignment and domain information |
|---|
Probab=82.68 E-value=14 Score=37.14 Aligned_cols=83 Identities=12% Similarity=0.227 Sum_probs=54.4
Q ss_pred hHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEE---EEecCceeccccCCCCCCccccC
Q 009890 58 WPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYA---HLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 58 W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~V---ilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
+++.|++++++|++.|++.+- +-|.-.++.++ ..++.++-+++++.||.+ .+ -+||.
T Consensus 14 ~~~~l~~~~~~G~d~vEl~~~-~p~~~~~~~~~---~~~~~~lk~~~~~~gl~~~~~~~-h~~~~--------------- 73 (281)
T PRK01060 14 LEGAVAEAAEIGANAFMIFTG-NPQQWKRKPLE---ELNIEAFKAACEKYGISPEDILV-HAPYL--------------- 73 (281)
T ss_pred HHHHHHHHHHcCCCEEEEECC-CCCCCcCCCCC---HHHHHHHHHHHHHcCCCCCceEE-ecceE---------------
Confidence 889999999999999999652 11211122222 126888999999999973 32 23432
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHH
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
+.+-+.|+..+++..+.+++.++..+
T Consensus 74 ---~nl~~~d~~~r~~s~~~~~~~i~~A~ 99 (281)
T PRK01060 74 ---INLGNPNKEILEKSRDFLIQEIERCA 99 (281)
T ss_pred ---ecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11334567777777777777777766
|
|
| >cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose | Back alignment and domain information |
|---|
Probab=81.89 E-value=2.6 Score=43.56 Aligned_cols=74 Identities=16% Similarity=0.206 Sum_probs=51.8
Q ss_pred eeCCCC---CccchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCc--chHHHHHHHHHHcCCEEEEecCceecc
Q 009890 48 IHYPRS---TPEMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGR--YDLVKFVKLVAEAGLYAHLRIGPYVCA 121 (523)
Q Consensus 48 iHy~R~---~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~--~dL~~fl~la~~~GL~Vilr~GPyi~a 121 (523)
+|+.|. +.+...+.++++|+.||.+=..++-..++... .|.|.|.-. -|..++++..++.|+++++.+=|+|+.
T Consensus 13 ~~~~~~~y~~~~~v~~~~~~~~~~~iP~d~~~lD~~w~~~~~~~~f~~d~~~FPd~~~~i~~l~~~G~~~~~~~~P~i~~ 92 (308)
T cd06593 13 LWLSRSFYYDEEEVNEFADGMRERNLPCDVIHLDCFWMKEFQWCDFEFDPDRFPDPEGMLSRLKEKGFKVCLWINPYIAQ 92 (308)
T ss_pred HHHHcccCCCHHHHHHHHHHHHHcCCCeeEEEEecccccCCcceeeEECcccCCCHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 344453 67778899999999996654444433333322 245665532 389999999999999999999888864
|
YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes. |
| >PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins | Back alignment and domain information |
|---|
Probab=81.48 E-value=1 Score=39.21 Aligned_cols=19 Identities=47% Similarity=0.502 Sum_probs=13.2
Q ss_pred CcchhhHHHHHHHHHHHHH
Q 009890 1 MASKEILLLVLCWGFVVLA 19 (523)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~ 19 (523)
|+||.+|++.++++++|++
T Consensus 1 MaSK~~llL~l~LA~lLli 19 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLLI 19 (95)
T ss_pred CchhHHHHHHHHHHHHHHH
Confidence 9999988877665544433
|
Some of them may be involved in resistance to environmental stress []. |
| >cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus | Back alignment and domain information |
|---|
Probab=81.34 E-value=13 Score=38.43 Aligned_cols=72 Identities=17% Similarity=0.223 Sum_probs=50.6
Q ss_pred eeCCCC---CccchHHHHHHHHhCCCCEEEEccccCcCCC--------CCceeeccCc--chHHHHHHHHHHcCCEEEEe
Q 009890 48 IHYPRS---TPEMWPDLIQKSKDGGLDVIETYVFWNLHEP--------VRNQYNFEGR--YDLVKFVKLVAEAGLYAHLR 114 (523)
Q Consensus 48 iHy~R~---~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp--------~~G~ydF~G~--~dL~~fl~la~~~GL~Vilr 114 (523)
+|..|. +.+.-++.++++|+.||-+=-+++-..+|.- .-+.|.|.-. -|..++++..++.|++|++.
T Consensus 14 ~~qsr~~y~s~~ev~~v~~~~r~~~iP~D~i~lD~dw~~~~~~~~~~~~~~~ft~d~~~FPdp~~mi~~Lh~~G~k~v~~ 93 (292)
T cd06595 14 NWWSRYWPYSDEEYLALMDRFKKHNIPLDVLVIDMDWHVTDIPSKYGSGWTGYSWNRKLFPDPEKLLQDLHDRGLKVTLN 93 (292)
T ss_pred hHhhCCcCCCHHHHHHHHHHHHHhCCCccEEEEecccccccccccccCCcceeEEChhcCCCHHHHHHHHHHCCCEEEEE
Confidence 455553 6677789999999999876555554333321 2356666532 48999999999999999988
Q ss_pred cCcee
Q 009890 115 IGPYV 119 (523)
Q Consensus 115 ~GPyi 119 (523)
+=|+|
T Consensus 94 v~P~~ 98 (292)
T cd06595 94 LHPAD 98 (292)
T ss_pred eCCCc
Confidence 75543
|
Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. |
| >PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=81.28 E-value=20 Score=38.91 Aligned_cols=164 Identities=12% Similarity=0.063 Sum_probs=88.1
Q ss_pred eCCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCC----ceeeccCc---chHHHHHHHHHHcCCEEEEecCceecc
Q 009890 49 HYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVR----NQYNFEGR---YDLVKFVKLVAEAGLYAHLRIGPYVCA 121 (523)
Q Consensus 49 Hy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~----G~ydF~G~---~dL~~fl~la~~~GL~Vilr~GPyi~a 121 (523)
+|+..+.+.-.+.++++++.|++.+.+-=-|....... |.|--.-. .-|..+++.+++.||..=|...|.+.+
T Consensus 51 ~~~d~~e~~i~~~a~~~~~~G~e~fviDDGW~~~r~~d~~~~GdW~~~~~kFP~Gl~~l~~~i~~~Gmk~GlW~ePe~v~ 130 (394)
T PF02065_consen 51 YYFDITEEKILELADAAAELGYEYFVIDDGWFGGRDDDNAGLGDWEPDPKKFPNGLKPLADYIHSLGMKFGLWFEPEMVS 130 (394)
T ss_dssp HTTG--HHHHHHHHHHHHHHT-SEEEE-SSSBCTESTTTSTTSBECBBTTTSTTHHHHHHHHHHHTT-EEEEEEETTEEE
T ss_pred cCcCCCHHHHHHHHHHHHHhCCEEEEEcCccccccCCCcccCCceeEChhhhCCcHHHHHHHHHHCCCeEEEEecccccc
Confidence 46667778888999999999999988877786542211 33322211 139999999999999999998887664
Q ss_pred c--cCCCCCCccccCCCCee---------eecCChhHHHHHHHHHHHHHHHHHhccccc-ccCCceEecccccccccccc
Q 009890 122 E--WNFGGFPLWLHFIPGIQ---------FRTDNEPFKAEMQRFTAKIVDMMKQEKLYA-SQGGPIILSQIENEYGNIDS 189 (523)
Q Consensus 122 E--w~~GG~P~WL~~~p~i~---------~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~-~~gGpII~~QIENEyg~~~~ 189 (523)
. --+-..|.|+...++.. +-..+|...+++... |.+.+++.++-+ +=..+.-+.+..+...
T Consensus 131 ~~S~l~~~hPdw~l~~~~~~~~~~r~~~vLD~~~pev~~~l~~~---i~~ll~~~gidYiK~D~n~~~~~~~~~~~---- 203 (394)
T PF02065_consen 131 PDSDLYREHPDWVLRDPGRPPTLGRNQYVLDLSNPEVRDYLFEV---IDRLLREWGIDYIKWDFNRDITEAGSPSL---- 203 (394)
T ss_dssp SSSCHCCSSBGGBTCCTTSE-ECBTTBEEB-TTSHHHHHHHHHH---HHHHHHHTT-SEEEEE-TS-TTS-SSTTS----
T ss_pred chhHHHHhCccceeecCCCCCcCcccceEEcCCCHHHHHHHHHH---HHHHHHhcCCCEEEeccccCCCCCCCCCc----
Confidence 3 11335799997755421 223345444444333 334455554321 2112222222222211
Q ss_pred ccCcccHHHHHH---HHHHHHhcCCCcceEEccCC
Q 009890 190 AYGAAGKSYIKW---AAGMALSLDTGVPWVMCQQS 221 (523)
Q Consensus 190 ~~g~~~~~y~~~---l~~~~~~~g~~vP~~~~~~~ 221 (523)
++...+|+.- +.+..++..-+|-+-.|...
T Consensus 204 --~~~~~~~~~~~y~l~~~L~~~~P~v~iE~CssG 236 (394)
T PF02065_consen 204 --PEGYHRYVLGLYRLLDRLRARFPDVLIENCSSG 236 (394)
T ss_dssp ---GHHHHHHHHHHHHHHHHHHHTTTSEEEE-BTT
T ss_pred --hHHHHHHHHHHHHHHHHHHHhCCCcEEEeccCC
Confidence 1234456553 34444556677777788754
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A .... |
| >PRK09989 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=81.06 E-value=15 Score=36.67 Aligned_cols=43 Identities=16% Similarity=0.328 Sum_probs=34.6
Q ss_pred chHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEE
Q 009890 57 MWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHL 113 (523)
Q Consensus 57 ~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vil 113 (523)
-.++.|++++++|++.|++..+|. .+...+.++++++||.|..
T Consensus 16 ~l~~~l~~~~~~Gfd~VEl~~~~~--------------~~~~~~~~~l~~~Gl~v~~ 58 (258)
T PRK09989 16 PFIERFAAARKAGFDAVEFLFPYD--------------YSTLQIQKQLEQNHLTLAL 58 (258)
T ss_pred CHHHHHHHHHHcCCCEEEECCccc--------------CCHHHHHHHHHHcCCcEEE
Confidence 468999999999999999954332 2467888889999999874
|
|
| >COG1649 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=80.88 E-value=7.9 Score=42.24 Aligned_cols=122 Identities=19% Similarity=0.291 Sum_probs=76.8
Q ss_pred CccchHHHHHHHHhCCCCEEEEcc-------------ccCcCCCCCceeecc-CcchHHHHHHHHHHcCCEEEEecCcee
Q 009890 54 TPEMWPDLIQKSKDGGLDVIETYV-------------FWNLHEPVRNQYNFE-GRYDLVKFVKLVAEAGLYAHLRIGPYV 119 (523)
Q Consensus 54 ~~~~W~d~l~k~Ka~GlN~V~tYv-------------fWn~HEp~~G~ydF~-G~~dL~~fl~la~~~GL~Vilr~GPyi 119 (523)
.+++-.+.|.+++++|+|||-.=| +|..-- ||..-=. |..-|...|++|++.||.|+.+.=||.
T Consensus 62 ~~~el~~~ld~l~~ln~NTv~~qV~~~G~~lypS~~~p~s~~~--~~~~~~~~g~DpLa~~I~~AHkr~l~v~aWf~~~~ 139 (418)
T COG1649 62 QRQELKDILDDLQKLNFNTVYPQVWNDGDALYPSAVLPWSDGL--PGVLGVDPGYDPLAFVIAEAHKRGLEVHAWFNPYR 139 (418)
T ss_pred cHHHHHHHHHHHHHcCCceeEEEEecCccccccccccccccCc--CcccCCCCCCChHHHHHHHHHhcCCeeeechhhcc
Confidence 677778999999999999986432 233222 3433212 333588889999999999999988877
Q ss_pred ccccCCC---CCCccccC-CCCeee-ecCC-------hhHHHHHHHHHHH-HHHHHHhcccccccCCceEecccccccc
Q 009890 120 CAEWNFG---GFPLWLHF-IPGIQF-RTDN-------EPFKAEMQRFTAK-IVDMMKQEKLYASQGGPIILSQIENEYG 185 (523)
Q Consensus 120 ~aEw~~G---G~P~WL~~-~p~i~~-Rt~d-------~~fl~~~~~~~~~-i~~~ik~~~l~~~~gGpII~~QIENEyg 185 (523)
-|--..- --|.|+.. .|+... |.+. .++.-+++.|+.. ++++++++ .|=++|++-=+.
T Consensus 140 ~a~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ldPg~Pevq~~i~~lv~evV~~Y--------dvDGIQfDd~fy 210 (418)
T COG1649 140 MAPPTSPLTKRHPHWLTTKRPGWVYVRHQGWGKRVWLDPGIPEVQDFITSLVVEVVRNY--------DVDGIQFDDYFY 210 (418)
T ss_pred cCCCCChhHhhCCCCcccCCCCeEEEecCCceeeeEeCCCChHHHHHHHHHHHHHHhCC--------CCCceecceeec
Confidence 6531111 13566654 244322 2221 2456778888877 55566644 466788766554
|
|
| >cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase | Back alignment and domain information |
|---|
Probab=80.62 E-value=12 Score=38.88 Aligned_cols=69 Identities=17% Similarity=0.320 Sum_probs=53.9
Q ss_pred CCCCccchHHHHHHHHhCCC--CEEEEccccCcCCCCCceeeccC--cchHHHHHHHHHHcCCEEEEecCceeccc
Q 009890 51 PRSTPEMWPDLIQKSKDGGL--DVIETYVFWNLHEPVRNQYNFEG--RYDLVKFVKLVAEAGLYAHLRIGPYVCAE 122 (523)
Q Consensus 51 ~R~~~~~W~d~l~k~Ka~Gl--N~V~tYvfWn~HEp~~G~ydF~G--~~dL~~fl~la~~~GL~Vilr~GPyi~aE 122 (523)
...+.+.-.+.++++++.|+ ++|-+-..|- ..-|.|.|.- .-|..++++..++.|+++++.+=|+|+.+
T Consensus 25 ~~~s~~~v~~~~~~~~~~~iP~d~i~iD~~w~---~~~g~f~~d~~~FPdp~~mi~~l~~~G~k~~l~i~P~i~~~ 97 (303)
T cd06592 25 ADINQETVLNYAQEIIDNGFPNGQIEIDDNWE---TCYGDFDFDPTKFPDPKGMIDQLHDLGFRVTLWVHPFINTD 97 (303)
T ss_pred cCcCHHHHHHHHHHHHHcCCCCCeEEeCCCcc---ccCCccccChhhCCCHHHHHHHHHHCCCeEEEEECCeeCCC
Confidence 34577888999999999995 5666666563 3456666653 34899999999999999999999999853
|
Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. |
| >PRK10150 beta-D-glucuronidase; Provisional | Back alignment and domain information |
|---|
Probab=80.49 E-value=2.6 Score=47.77 Aligned_cols=44 Identities=27% Similarity=0.407 Sum_probs=37.0
Q ss_pred CceeeEEEeEEEecCCCccccCCCeeEEEEeecCcEEEEEEcCeeeec
Q 009890 475 QSDYLWYSLSTNIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVGE 522 (523)
Q Consensus 475 ~sDYLWY~T~v~i~~~~~~~~~~~~~~L~v~s~gh~lh~FVNg~~~G~ 522 (523)
-.-..||.++|++.+. +.++...|+.+.......|||||++||.
T Consensus 63 ~~G~~WYrr~f~lp~~----~~gk~v~L~Fegv~~~a~V~lNG~~vg~ 106 (604)
T PRK10150 63 YVGDVWYQREVFIPKG----WAGQRIVLRFGSVTHYAKVWVNGQEVME 106 (604)
T ss_pred CcccEEEEEEEECCcc----cCCCEEEEEECcccceEEEEECCEEeee
Confidence 3445899999999743 2357899999999999999999999995
|
|
| >PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A | Back alignment and domain information |
|---|
Probab=80.27 E-value=37 Score=38.60 Aligned_cols=158 Identities=14% Similarity=0.122 Sum_probs=77.7
Q ss_pred cchHHHHHHHHhCCCCEEEEc-cccCcCCCCCcee--------eccCc----chHHHHHHHHHHcCCEEEEecCceeccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETY-VFWNLHEPVRNQY--------NFEGR----YDLVKFVKLVAEAGLYAHLRIGPYVCAE 122 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tY-vfWn~HEp~~G~y--------dF~G~----~dL~~fl~la~~~GL~Vilr~GPyi~aE 122 (523)
+.=++.|..|+..-||.|+.| ..|.+|.|.|+.= |+.|+ .-+...|+.|++.||.++.=--=|-+-+
T Consensus 118 ~~~~~~i~~L~~yHIN~~QFYDW~~rH~~Pl~~~~~~~~~~w~D~~~r~i~~~~Vk~yI~~ah~~Gmkam~Ynmiyaa~~ 197 (559)
T PF13199_consen 118 EDIEAEIDQLNRYHINGLQFYDWMYRHHKPLPGTNGQPDQTWTDWANRQISTSTVKDYINAAHKYGMKAMAYNMIYAANN 197 (559)
T ss_dssp HHHHHHHHHHHHTT--EEEETS--SBTTB-S-SSS-EEE-TT-TTT--EEEHHHHHHHHHHHHHTT-EEEEEEESSEEET
T ss_pred hhHHHHHHHHHhhCcCeEEEEeeccccCCcCCCCCCchhhhhhhhcCCEehHHHHHHHHHHHHHcCcceehhHhhhcccc
Confidence 456789999999999999999 8999999987433 34454 2478999999999999885432222222
Q ss_pred c--CCCCCCccccC-CCCe------ee-----------ecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccc
Q 009890 123 W--NFGGFPLWLHF-IPGI------QF-----------RTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIEN 182 (523)
Q Consensus 123 w--~~GG~P~WL~~-~p~i------~~-----------Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIEN 182 (523)
. ..|=.|.|-.. .++- .+ -..|+.++++.-.=+.+.++.+.=.+.+..+=|+.--+ .+
T Consensus 198 ~~~~~gv~~eW~ly~d~~~~~~~~~~l~~~w~s~lyl~dP~N~~WQ~yI~~q~~~~~~~~gFDG~hlDq~G~~~~~--~d 275 (559)
T PF13199_consen 198 NYEEDGVSPEWGLYKDDSHSNQDTYDLPDGWPSDLYLMDPGNPEWQNYIINQMNKAIQNFGFDGWHLDQLGNRGTV--YD 275 (559)
T ss_dssp T--S--SS-GGBEEESSSBTSB-EEEETT-E--EEEEB-TT-HHHHHHHHHHHHHHHHHHT--EEEEE-S--EEEE--GG
T ss_pred CcccccCCchhhhhhccCCCccceeecCcccccceEEecCCCHHHHHHHHHHHHHHHHccCCceEeeeccCCCCcc--cc
Confidence 2 35567788753 2221 11 12245555555444444444443333333333433222 11
Q ss_pred cccccccccCcccHHHHHHHHHHHHhcCCCcceEEcc
Q 009890 183 EYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQ 219 (523)
Q Consensus 183 Eyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~ 219 (523)
.-|... ..-...|...|.++-..+ .+-+++|+.
T Consensus 276 ~~G~~i---~~l~~~y~~Fi~~~K~~~-~~k~lv~N~ 308 (559)
T PF13199_consen 276 YDGNKI---YDLSDGYASFINAMKEAL-PDKYLVFNA 308 (559)
T ss_dssp TT---G---GECHHHHHHHHHHHHHHS-TTSEEEEB-
T ss_pred CCCCCc---hhhHHHHHHHHHHHHHhC-CCCceeeec
Confidence 112110 012346666666655444 667788765
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 523 | ||||
| 3d3a_A | 612 | Crystal Structure Of A Beta-Galactosidase From Bact | 6e-40 | ||
| 4e8c_A | 595 | Crystal Structure Of Streptococcal Beta-Galactosida | 1e-36 | ||
| 3thc_A | 654 | Crystal Structure Of Human Beta-Galactosidase In Co | 8e-36 | ||
| 1tg7_A | 971 | Native Structure Of Beta-Galactosidase From Penicil | 2e-27 | ||
| 3og2_A | 1003 | Native Crystal Structure Of Trichoderma Reesei Beta | 5e-24 |
| >pdb|3D3A|A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron Length = 612 | Back alignment and structure |
|
| >pdb|4E8C|A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose Length = 595 | Back alignment and structure |
|
| >pdb|3THC|A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose Length = 654 | Back alignment and structure |
|
| >pdb|1TG7|A Chain A, Native Structure Of Beta-Galactosidase From Penicillium Sp. Length = 971 | Back alignment and structure |
|
| >pdb|3OG2|A Chain A, Native Crystal Structure Of Trichoderma Reesei Beta-Galactosidase Length = 1003 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 523 | |||
| 3og2_A | 1003 | Beta-galactosidase; TIM barrel domain, glycoside h | 1e-152 | |
| 1tg7_A | 971 | Beta-galactosidase; TIM barrel domain, glycoside h | 1e-137 | |
| 3thd_A | 654 | Beta-galactosidase; TIM-barrel domain, glycosyl hy | 1e-128 | |
| 3d3a_A | 612 | Beta-galactosidase; protein structure initiative I | 1e-127 | |
| 4e8d_A | 595 | Glycosyl hydrolase, family 35; TIM barrel, beta-pr | 1e-119 | |
| 3u7v_A | 552 | Beta-galactosidase; structural genomics, PSI-biolo | 8e-57 | |
| 3tty_A | 675 | Beta-GAL, beta-galactosidase; TIM barrel, glycosid | 4e-09 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 7e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 |
| >3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* Length = 1003 | Back alignment and structure |
|---|
Score = 460 bits (1185), Expect = e-152
Identities = 119/557 (21%), Positives = 197/557 (35%), Gaps = 59/557 (10%)
Query: 19 ATTSFGANVTYDHRAVVIGGKRRVLISGSIHYPR-STPEMWPDLIQKSKDGGLDVIETYV 77
A VT+D ++ + G+R V+ SG +H R P ++ D+ K K G + + YV
Sbjct: 18 AKGPLQNIVTWDEHSLFVHGERVVIFSGEVHPFRLPVPSLYLDVFHKIKALGFNTVSFYV 77
Query: 78 FWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPG 137
W L E ++ +G + L F + +AG+Y R GPY+ AE + GGFP WL + G
Sbjct: 78 DWALLEGKPGRFRADGIFSLEPFFEAATKAGIYLLARPGPYINAEVSGGGFPGWLQRVKG 137
Query: 138 IQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKS 197
+ RTD + + A I ++ K + GGP+IL Q ENEY K
Sbjct: 138 -KLRTDAPDYLHATDNYVAHIASIIA--KAQITNGGPVILYQPENEYSGAAEGVLFPNKP 194
Query: 198 YIKWAAGMALSLDTGVPWVMC----QQSDAPDPIINTCNGFYCDQFTPNSN--------- 244
Y+++ A + VP + + AP + + + + D + +
Sbjct: 195 YMQYVIDQARNAGIIVPLINNDAFPGGTGAPGTGLGSVDIYGHDGYPLGFDCAHPSAWPD 254
Query: 245 ----------------NKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQR----- 283
+ P E G F FGG + + R F +
Sbjct: 255 NGLPTTWRQDHLNISPSTPFSLVEFQGGAFDPFGGWGFEQCSALVNHEFERVFYKNNMAA 314
Query: 284 GGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCE 343
G T N YM GGTN+ G P TSYDY A + E I + K+ LK + +K+
Sbjct: 315 GVTIFNIYMTFGGTNWGNL-GHPGGYTSYDYGASIREDRRIDREKYSELKLQGQFLKVSP 373
Query: 344 AALVATDP--TYPSLGPNLEATVYKTGSGLCSAFLANIGTNSD--------VTVKFNGNS 393
+ AT T + + + F N V + +
Sbjct: 374 GYITATPENATQGVYSDSQNIVITPLLAKESGDFFVVRHANYSSTDTASYTVKLPTSAGD 433
Query: 394 YLLPAWSVSILPDCKNVVFNTAKIN--SVTLVPSFSRQSLQVAADSSDAIGSGWSYINEP 451
+P S+ ++ + TL+ S + + + E
Sbjct: 434 LTIPQLGGSLTLTGRDSKIHVTDYPVGKFTLLYSTAEIFTWNEFAEKTVL-VLYGGAQEL 492
Query: 452 VGI-----SKDDAFTKPGLLEQINTTADQSDYLWYSLSTNIKADEPLLEDGSKTVLHVQS 506
K +E N T + L L + +++ GS + V
Sbjct: 493 HEFAVKNPFGSSKTAKAKKIEGSNVTIHTTSNLTVVLQWTASSARQVVQLGSLVIYMVDR 552
Query: 507 LGHALHAFINGKLVGEE 523
++ + + L G
Sbjct: 553 --NSAYNYWVPTLPGSG 567
|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Length = 971 | Back alignment and structure |
|---|
Score = 420 bits (1081), Expect = e-137
Identities = 120/529 (22%), Positives = 194/529 (36%), Gaps = 59/529 (11%)
Query: 27 VTYDHRAVVIGGKRRVLISGSIHYPR-STPEMWPDLIQKSKDGGLDVIETYVFWNLHEPV 85
VT+D ++ + G+R ++ SG +H R ++ D+ +K K G + + YV W L E
Sbjct: 6 VTWDEHSIFVNGERLMIFSGEVHPYRLPVASLYIDIFEKVKALGFNCVSFYVDWALLEGN 65
Query: 86 RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNE 145
Y+ EG +DL F EAG+Y R GPY+ AE + GGFP WL + GI RT +E
Sbjct: 66 PGHYSAEGIFDLQPFFDAAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVDGI-LRTSDE 124
Query: 146 PFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAY-GAAGKSYIKWAAG 204
+ + + I + K + GGPIIL Q ENEY Y G SY+++
Sbjct: 125 AYLKATDNYASNIAATIA--KAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIED 182
Query: 205 MALSLDTGVPWVMC----QQSDAPDPIINTCNGFYCDQFTP------------------- 241
A VP++ +AP + + D +
Sbjct: 183 HARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGNLPTYF 242
Query: 242 ------NSNNKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQR-----GGTFQNY 290
S + P E G F +GG + L R F + G F N
Sbjct: 243 HTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLNL 302
Query: 291 YMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVAT- 349
YM GGTN+ G P TSYDY + + E I + K+ LK L K+ LVA
Sbjct: 303 YMIFGGTNWGNL-GHPGGYTSYDYGSAISESRNITREKYSELKLLGNFAKVSPGYLVANP 361
Query: 350 ----DPTYPSLGPNLEATVYKTGSGLCSAFLAN-------IGTNSDVTVKFNGNSYLLPA 398
TY + + + S S F+ +TV + + +P
Sbjct: 362 GDLSTSTYTNTADLTVTPLLGSNSSASSFFVIRHSDYSSQASVEYKLTVPTSAGNLTIPQ 421
Query: 399 WSVSILPDCKNVVFNTAKINSVTLVPSFSRQSLQVAADSSDAIGSGWSYINEPVGISKDD 458
S+ ++ + + +S + ++ + G +
Sbjct: 422 LGGSLTLSGRDSKIHVTDYDVAGTNILYSTAEVFTWKKFNN---EKVLVLYGGPGEHHEF 478
Query: 459 AFTKPGLLEQINTTADQSDYLWYSLSTNIKADEPLLEDGSKTVLHVQSL 507
A + + ++ + + D ++ ++ V SL
Sbjct: 479 AVSGASSSSVVEGSSSGISSKKVGKALVVAWD----VSTARRIVQVGSL 523
|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* Length = 654 | Back alignment and structure |
|---|
Score = 388 bits (997), Expect = e-128
Identities = 115/420 (27%), Positives = 174/420 (41%), Gaps = 26/420 (6%)
Query: 20 TTSFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFW 79
T + Y + + G+ ISGSIHY R W D + K K GL+ I+TYV W
Sbjct: 4 ATQRMFEIDYSRDSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPW 63
Query: 80 NLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQ 139
N HEP QY F +D+ F++L E GL LR GPY+CAEW GG P WL I
Sbjct: 64 NFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESIL 123
Query: 140 FRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYI 199
R+ + + A + ++ ++ MK L GGP+I Q+ENEYG +Y A Y+
Sbjct: 124 LRSSDPDYLAAVDKWLGVLLPKMK--PLLYQNGGPVITVQVENEYG----SYFACDFDYL 177
Query: 200 KWAAGMAL-----------SLDTGVPWVMCQQSDAPDPIINTCNGF-YCDQFTPNSN--- 244
++ + ++ C ++ G D F
Sbjct: 178 RFLQKRFRHHLGDDVVLFTTDGAHKTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKCEP 237
Query: 245 NKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSG 304
P + +E ++GW +G E +A ++ RG + N YM+ GGTNF +G
Sbjct: 238 KGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASV-NLYMFIGGTNFAYWNG 296
Query: 305 G----PFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNL 360
TSYDYDAPL E G + + + + K K+ E + + P + L
Sbjct: 297 ANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTL 356
Query: 361 EATVYKTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSV 420
E + I + +T Y + ++ DC N ++ +N V
Sbjct: 357 EKLKTVGAALDILCPSGPIKSLYPLTFIQVKQHYGFVLYRTTLPQDCSNPAPLSSPLNGV 416
|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Length = 612 | Back alignment and structure |
|---|
Score = 383 bits (984), Expect = e-127
Identities = 137/549 (24%), Positives = 207/549 (37%), Gaps = 61/549 (11%)
Query: 24 GANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHE 83
++ G+ V+ + IHYPR E W I+ K G++ I YVFWN HE
Sbjct: 5 EGTFEVGKNTFLLNGEPFVVKAAEIHYPRIPKEYWEHRIKMCKALGMNTICLYVFWNFHE 64
Query: 84 PVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTD 143
P +Y+F G+ D+ F +L E G+Y +R GPYVCAEW GG P WL I+ R
Sbjct: 65 PEEGRYDFAGQKDIAAFCRLAQENGMYVIVRPGPYVCAEWEMGGLPWWLLKKKDIKLREQ 124
Query: 144 NEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAA 203
+ + ++ F ++ + L S+GG II+ Q+ENEYG K YI
Sbjct: 125 DPYYMERVKLFLNEVGKQLA--DLQISKGGNIIMVQVENEYG-----AFGIDKPYISEIR 177
Query: 204 GMALS-LDTGVPWVMCQ-----QSDAPDPIINTCN---GFYCDQ----FTPNSNNKPKMW 250
M TGVP C +++A D ++ T N G D+ + P M
Sbjct: 178 DMVKQAGFTGVPLFQCDWNSNFENNALDDLLWTINFGTGANIDEQFKRLKELRPDTPLMC 237
Query: 251 TENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPF--- 307
+E WSGWF +G R E+L + R +F + YM HGGT+F G F
Sbjct: 238 SEFWSGWFDHWGAKHETRSAEELVKGMKEMLDRNISF-SLYMTHGGTSFGHWGGANFPNF 296
Query: 308 --ISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVY 365
TSYDYDAP++E G + PK+ +++L L + P++
Sbjct: 297 SPTCTSYDYDAPINESGKVT-PKYLEVRNLLGNYLPEGETLPEIPDSIPTIAIPTIKMTE 355
Query: 366 KT---GSGLCSAFLANIGTNSDVTVKFNGNSYL--------LPAWSVSILPDCKNVVFNT 414
+ +I T + Y ++ D V N
Sbjct: 356 MAVLFDNLPHPKESEDIRTMEAFDQGWGSILYRTSLSASDKEQTLLITEAHDWAQVFLNG 415
Query: 415 AKI---------NSVTLVPSFSRQSLQVAADSSDAIGSGWSY-----INEPVGISKDDAF 460
K+ V L P L + ++ + G I E V + D
Sbjct: 416 KKLATLSRLKGEGVVKLPPLKEGDRLDILVEAMGRMNFGKGIYDWKGITEKVELQSDKGV 475
Query: 461 TKPGLLEQINTTADQSDYLWYSLSTNIKADEPL--------LEDGSKTVLHVQSLGHALH 512
+ D S A+ L + T L++ +
Sbjct: 476 ELVKDWQVYTIPVDYSFARDKQYKQQENAENQPAYYRSTFNLNELGDTFLNMMNWSKG-M 534
Query: 513 AFINGKLVG 521
++NG +G
Sbjct: 535 VWVNGHAIG 543
|
| >4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A Length = 595 | Back alignment and structure |
|---|
Score = 362 bits (931), Expect = e-119
Identities = 104/345 (30%), Positives = 156/345 (45%), Gaps = 26/345 (7%)
Query: 35 VIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGR 94
+ GK ++SG+IHY R PE W + K G + +ETYV WNLHEP +++FEG
Sbjct: 11 YLDGKSFKILSGAIHYFRVPPEDWYHSLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGD 70
Query: 95 YDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRF 154
DL KF+++ + GLYA +R P++CAEW FGG P WL ++ R+ + + + R+
Sbjct: 71 LDLEKFLQIAQDLGLYAIVRPSPFICAEWEFGGLPAWLL-TKNMRIRSSDPAYIEAVGRY 129
Query: 155 TAKIVDMMKQEKLYASQGGPIILSQIENEYG--NIDSAYGAAGKSYIKWAAGMALSLDTG 212
+++ + GG I++ Q+ENEYG D AY A + ++ +
Sbjct: 130 YDQLLPRLV--PRLLDNGGNILMMQVENEYGSYGEDKAYLRAIRQLMEECGVTCPLFTSD 187
Query: 213 VPWVMCQQSDA--PDPIINTCN---------GFYCDQFTPNSNNKPKMWTENWSGWFLSF 261
PW ++ + + T N + F + P M E W GWF +
Sbjct: 188 GPWRATLKAGTLIEEDLFVTGNFGSKAPYNFSQMQEFFDEHGKKWPLMCMEFWDGWFNRW 247
Query: 262 GGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGG-------PFISTSYDY 314
+ R ++LA AV ++G N YM+HGGTNF +G TSYDY
Sbjct: 248 KEPIITRDPKELADAVREVLEQGSI--NLYMFHGGTNFGFMNGCSARGTLDLPQVTSYDY 305
Query: 315 DAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPN 359
DA LDE G K+ +K + L L
Sbjct: 306 DALLDEEGNPT-AKYLAVKKMMATHFSEYPQLEPLYKESMELDAI 349
|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} Length = 552 | Back alignment and structure |
|---|
Score = 197 bits (502), Expect = 8e-57
Identities = 38/211 (18%), Positives = 77/211 (36%), Gaps = 20/211 (9%)
Query: 6 ILLLVLCWGFVVLATTSFGANVTYDHR-AVVIGGKRRVLISGSIHYPRSTPEMWPDLIQK 64
L+ A + VT D R A+++ G ++++ ++ + P +
Sbjct: 22 ALVCGPLASGAHAADAAMPQLVTKDGRHALMVDGAPFLMLAAQVNNSSAWPSQMAKVWPA 81
Query: 65 SKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRI-------GP 117
+ G + ++ + W EPV Q++F L ++ E + L P
Sbjct: 82 IEKVGANTVQVPIAWEQIEPVEGQFDFSY---LDLLLEQARERKVRLVLLWFGTWKNSSP 138
Query: 118 YVCAEW---NFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGP 174
EW + FP + G + + + K+ + V +M K +
Sbjct: 139 SYAPEWVKLDDKRFPRLIKD-DGERSYSMSPLAKSTLDADRKAFVALMTHLKAKDAAQKT 197
Query: 175 IILSQIENEYGNIDSAYGAAGKSYIKWAAGM 205
+I+ Q+ENE G YG+ + + A +
Sbjct: 198 VIMVQVENETG----TYGSV-RDFGPAAQKV 223
|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Length = 675 | Back alignment and structure |
|---|
Score = 58.4 bits (140), Expect = 4e-09
Identities = 26/164 (15%), Positives = 51/164 (31%), Gaps = 21/164 (12%)
Query: 36 IGGKRRVLISGSIHYP-RSTPEMWPDLIQKSKDGGLDVIETYVF-WNLHEPVRNQYNFEG 93
I K + G + P + + ++ G+DV VF W + Y+F
Sbjct: 2 INEKFPKIWYGGDYNPEQWDKATMEEDMRMFNLAGIDVATVNVFSWAKIQRDEVSYDFT- 60
Query: 94 RYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWL---------HFIPGIQFRTDN 144
L ++ + + +Y L W +P L F ++
Sbjct: 61 --WLDDIIERLTKENIYLCLATSTGAHPAWMAKKYPDVLRVDYEGRKRKFGGRHNSCPNS 118
Query: 145 EPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNID 188
++ + K+ + K I++ + NEYG
Sbjct: 119 PTYRKYAKILAGKLAERYKDHPQ-------IVMWHVSNEYGGYC 155
|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Length = 645 | Back alignment and structure |
|---|
Score = 54.1 bits (129), Expect = 7e-08
Identities = 30/167 (17%), Positives = 57/167 (34%), Gaps = 21/167 (12%)
Query: 46 GSIHYPRSTP-EMWPDLIQKSKDGGLDVIETYVF-WNLHEPVRNQYNFEGRYDLVKFVKL 103
G +YP P E W + ++ ++ GL + F W L EP + + L + +
Sbjct: 3 GVCYYPEHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEWG---WLDEAIAT 59
Query: 104 VAEAGLYAHLRIGPYVCAEWNFGGFPLWL---------HFIPGIQFRTDNEPFKAEMQRF 154
+A GL L +W +P L F + + ++ E +R
Sbjct: 60 LAAEGLKVVLGTPTATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRI 119
Query: 155 TAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKW 201
+ + + + Q +NEYG D+ + +
Sbjct: 120 VTLLAERYGGLE-------AVAGFQTDNEYGCHDTVRCYCPRCQEAF 159
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 2e-04
Identities = 37/225 (16%), Positives = 67/225 (29%), Gaps = 62/225 (27%)
Query: 8 LLVLCWGFVVLATTSFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKD 67
LL L W + D VV + L+ ST + P + + K
Sbjct: 391 LLSLIWF----------DVIKSDVMVVVNKLHKYSLVEK--QPKESTISI-PSIYLELKV 437
Query: 68 GGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHL-----RIGPYVCAE 122
+ LH + + YN +D + + Y+H+ I E
Sbjct: 438 KLENEYA------LHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEH---PE 488
Query: 123 WNFGGFPLW---LHFI-------------PG------IQFR------TDNEPFKAEMQRF 154
F + F+ G Q + DN+P + +R
Sbjct: 489 -RMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDP---KYERL 544
Query: 155 TAKIVDMMKQ--EKLYASQGGPIILSQIENEYGNI-DSAYGAAGK 196
I+D + + E L S+ ++ + E I + A+ +
Sbjct: 545 VNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 523 | |||
| 1tg7_A | 971 | Beta-galactosidase; TIM barrel domain, glycoside h | 100.0 | |
| 3og2_A | 1003 | Beta-galactosidase; TIM barrel domain, glycoside h | 100.0 | |
| 4e8d_A | 595 | Glycosyl hydrolase, family 35; TIM barrel, beta-pr | 100.0 | |
| 3thd_A | 654 | Beta-galactosidase; TIM-barrel domain, glycosyl hy | 100.0 | |
| 3d3a_A | 612 | Beta-galactosidase; protein structure initiative I | 100.0 | |
| 3u7v_A | 552 | Beta-galactosidase; structural genomics, PSI-biolo | 100.0 | |
| 3tty_A | 675 | Beta-GAL, beta-galactosidase; TIM barrel, glycosid | 99.91 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 99.9 | |
| 1vem_A | 516 | Beta-amylase; beta-alpha-barrels, optimum PH, hydr | 99.85 | |
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 99.82 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 99.75 | |
| 1yq2_A | 1024 | Beta-galactosidase; glycosyl hydrolase family 2, T | 99.69 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 99.65 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 99.63 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 99.61 | |
| 3cmg_A | 667 | Putative beta-galactosidase; structural genomics, | 99.52 | |
| 3fn9_A | 692 | Putative beta-galactosidase; structural genomics, | 99.51 | |
| 4awe_A | 387 | Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana | 99.51 | |
| 3gm8_A | 801 | Glycoside hydrolase family 2, candidate beta-GLYC; | 99.5 | |
| 3lpf_A | 605 | Beta-glucuronidase; alpha/beta barrel, sugar-bindi | 99.48 | |
| 3hn3_A | 613 | Beta-G1, beta-glucuronidase; lysosomal enzyme, aci | 99.48 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 99.47 | |
| 3vup_A | 351 | Beta-1,4-mannanase; TIM barrel, digestive fluid, H | 99.46 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 99.46 | |
| 4hty_A | 359 | Cellulase; (alpha/beta)8 barrel, family 5 endogluc | 99.46 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 99.3 | |
| 1jz7_A | 1023 | Lactase, beta-galactosidase, LACZ; TIM barrel (alp | 99.23 | |
| 2je8_A | 848 | Beta-mannosidase; glycoside hydrolase, hydrolase; | 99.23 | |
| 3bga_A | 1010 | Beta-galactosidase; NYSGXRC, protein structure ini | 99.22 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 99.2 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 99.2 | |
| 3oba_A | 1032 | Beta-galactosidase; TIM barrel, tetramer, GH2, gly | 99.19 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 99.15 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 99.15 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 99.12 | |
| 1xyz_A | 347 | 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola | 99.09 | |
| 1nq6_A | 302 | XYS1; glycoside hydrolase family 10, xylanase, xyl | 99.09 | |
| 3cui_A | 315 | EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine | 99.08 | |
| 2vzs_A | 1032 | CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, | 99.07 | |
| 1ur1_A | 378 | Endoxylanase; hydrolase, family 10, glycoside hydr | 99.07 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 99.06 | |
| 1i1w_A | 303 | Endo-1,4-beta-xylanase; xylan degradation, hydrola | 99.03 | |
| 1n82_A | 331 | Xylanase, intra-cellular xylanase; hydrolase; 1.45 | 98.99 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 98.99 | |
| 2dep_A | 356 | Xylanase B, thermostable celloxylanase; glycosidas | 98.97 | |
| 1ta3_B | 303 | Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), | 98.95 | |
| 1us2_A | 530 | Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca | 98.95 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 98.94 | |
| 1v0l_A | 313 | Endo-1,4-beta-xylanase A; glycoside hydrolase fami | 98.94 | |
| 2uwf_A | 356 | Endoxylanase, alkaline active endoxylanase; hydrol | 98.94 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 98.93 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 98.92 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 98.92 | |
| 2d1z_A | 436 | Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en | 98.85 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 98.84 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 98.84 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 98.84 | |
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 98.83 | |
| 1r85_A | 379 | Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A | 98.81 | |
| 1hjs_A | 332 | Beta-1,4-galactanase; 4-galactanases, family 53 gl | 98.73 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 98.73 | |
| 1w32_A | 348 | Endo-1,4-beta-xylanase A precursor; mutant, calciu | 98.73 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 98.71 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 98.71 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 98.69 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 98.69 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 98.67 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 98.67 | |
| 1vff_A | 423 | Beta-glucosidase; glycosyl hydrolase, membrane-bou | 98.66 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 98.64 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 98.64 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 98.62 | |
| 1qox_A | 449 | Beta-glucosidase; hydrolase, cellulose degradation | 98.61 | |
| 2o9p_A | 454 | Beta-glucosidase B; family 1 glycoside hydrolase; | 98.58 | |
| 1w91_A | 503 | Beta-xylosidase; MAD, seMet, tetramer, hydrolase; | 98.55 | |
| 2j78_A | 468 | Beta-glucosidase A; family 1, hydrolase, inhibitor | 98.52 | |
| 3ahx_A | 453 | Beta-glucosidase A; cellulases, glycosyl hydrolase | 98.52 | |
| 1wcg_A | 464 | Thioglucosidase, myrosinase; aphid, beta-glucosida | 98.48 | |
| 2e9l_A | 469 | Cytosolic beta-glucosidase; novel cytosolic neutra | 98.47 | |
| 3apg_A | 473 | Beta-glucosidase; TIM barrel, hydrolase, sugar bin | 98.43 | |
| 3fj0_A | 465 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase | 98.42 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 98.4 | |
| 1v08_A | 512 | Beta-glucosidase; glycoside hydrolase, dimboa-gluc | 98.4 | |
| 1qvb_A | 481 | Beta-glycosidase; TIM-barrel, thermostable, hydrol | 98.35 | |
| 3emz_A | 331 | Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba | 98.33 | |
| 1fob_A | 334 | Beta-1,4-galactanase; B/A barrel, glycosyl hydrola | 98.32 | |
| 1e4i_A | 447 | Beta-glucosidase; hydrolase, family 1 glycosyl hyd | 98.32 | |
| 2nt0_A | 497 | Glucosylceramidase; cerezyme, glucocerebrosidase, | 98.32 | |
| 1e4m_M | 501 | Myrosinase MA1; hydrolase, family 1 glycosyl hydro | 98.32 | |
| 1ug6_A | 431 | Beta-glycosidase; glucosidase, atomic resolution, | 98.31 | |
| 2wnw_A | 447 | Activated by transcription factor SSRB; hydrolase, | 98.3 | |
| 2dga_A | 565 | Beta-glucosidase; alpha/beta barrel, hydrolase; 1. | 98.3 | |
| 3ahy_A | 473 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 98.29 | |
| 2e3z_A | 465 | Beta-glucosidase; TIM barrel, glycoside hydrolase | 98.29 | |
| 1cbg_A | 490 | Cyanogenic beta-glucosidase; hydrolase (O-glycosyl | 98.27 | |
| 2xhy_A | 479 | BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, | 98.27 | |
| 1v02_A | 565 | Dhurrinase, dhurrinase-1; beta-glucosidase, dhurri | 98.27 | |
| 2jf7_A | 532 | Strictosidine-O-beta-D-glucosidase; alkaloid, hydr | 98.23 | |
| 3civ_A | 343 | Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. | 98.22 | |
| 1pbg_A | 468 | PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g | 98.21 | |
| 3u7b_A | 327 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 98.15 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 98.13 | |
| 4f8x_A | 335 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 98.13 | |
| 1fa2_A | 498 | Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.3 | 98.12 | |
| 3kzs_A | 463 | Glycosyl hydrolase family 5; structural genomics, | 98.12 | |
| 2y24_A | 383 | Xylanase; hydrolase, GH5 family, aldotetraouronic | 98.1 | |
| 3clw_A | 507 | Conserved exported protein; structural genomics, u | 98.1 | |
| 1wdp_A | 495 | Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.2 | 98.09 | |
| 3niy_A | 341 | Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 | 98.07 | |
| 2xfr_A | 535 | Beta-amylase; hydrolase, carbohydrate metabolism, | 98.06 | |
| 1uhv_A | 500 | Beta-xylosidase; family 39 glycoside hydrolase, xy | 98.01 | |
| 1gnx_A | 479 | Beta-glucosidase; hydrolase, glycosyltransferase, | 98.0 | |
| 4ekj_A | 500 | Beta-xylosidase; TIM-barrel fold, hemicellulase, h | 97.95 | |
| 3gnp_A | 488 | OS03G0212800 protein; beta-alpha barrel, glycosida | 97.77 | |
| 4hz8_A | 444 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba | 97.77 | |
| 4b3l_A | 479 | Beta-glucosidase; hydrolase, glycosidase, carbohyd | 97.73 | |
| 3f5l_A | 481 | Beta-glucosidase; beta-alpha-barrels, glycosidase, | 97.72 | |
| 4h41_A | 340 | Putative alpha-L-fucosidase; hydrolase, carbohydra | 97.51 | |
| 3ta9_A | 458 | Glycoside hydrolase family 1; TIM barrel, glucosid | 97.37 | |
| 3kl0_A | 401 | Glucuronoxylanase XYNC; alpha beta barrel, (beta/a | 97.21 | |
| 3gyc_A | 393 | Putative glycoside hydrolase; YP_001304622.1, stru | 97.2 | |
| 2zxd_A | 455 | Alpha-L-fucosidase, putative; TIM barrel, hydrolas | 97.2 | |
| 3ro8_A | 341 | Endo-1,4-beta-xylanase; glycosyl hydrolase family | 97.11 | |
| 4atd_A | 513 | Raucaffricine-O-beta-D-glucosidase; alkaloid, hydr | 97.07 | |
| 3ptm_A | 505 | Beta-glucosidase OS4BGlu12; beta-alpha barrel, gly | 97.06 | |
| 3qom_A | 481 | 6-phospho-beta-glucosidase; structural genomics, P | 97.05 | |
| 3vii_A | 487 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 96.97 | |
| 2w5f_A | 540 | Endo-1,4-beta-xylanase Y; cellulosome, glycosidase | 96.87 | |
| 3zr5_A | 656 | Galactocerebrosidase; hydrolase, GALC, glycosyl hy | 96.81 | |
| 4dde_A | 480 | 6-phospho-beta-glucosidase; structural genomics, P | 96.52 | |
| 2wvv_A | 450 | Alpha-L-fucosidase; alpha-L-fucose, hydrolase, gly | 96.47 | |
| 4a3y_A | 540 | Raucaffricine-O-beta-D-glucosidase; hydrolase, alk | 96.03 | |
| 4ha4_A | 489 | Beta-galactosidase; TIM barrel, beta-glycosidase, | 94.74 | |
| 1uwi_A | 489 | Beta-galactosidase; hydrolase, beta-glycosidase, g | 94.69 | |
| 3ngf_A | 269 | AP endonuclease, family 2; structural genomics, se | 94.07 | |
| 3k1d_A | 722 | 1,4-alpha-glucan-branching enzyme; mycobacterium t | 91.93 | |
| 2yfo_A | 720 | Alpha-galactosidase-sucrose kinase agask; hydrolas | 90.7 | |
| 4acy_A | 382 | Endo-alpha-mannosidase; hydrolase, endomannosidase | 90.34 | |
| 3mi6_A | 745 | Alpha-galactosidase; NESG, structural genomics, PS | 89.82 | |
| 4ad1_A | 380 | Glycosyl hydrolase family 71; glycoside hydrolase | 89.8 | |
| 3vni_A | 294 | Xylose isomerase domain protein TIM barrel; D-psic | 89.21 | |
| 1m7x_A | 617 | 1,4-alpha-glucan branching enzyme; alpha/beta barr | 89.05 | |
| 1ua7_A | 422 | Alpha-amylase; beta-alpha-barrels, acarbose, greek | 89.02 | |
| 3obe_A | 305 | Sugar phosphate isomerase/epimerase; structural ge | 88.77 | |
| 3vmn_A | 643 | Dextranase; TIM barrel, immunoglobrin fold, greek- | 88.58 | |
| 3kws_A | 287 | Putative sugar isomerase; structural genomics, joi | 88.52 | |
| 3zss_A | 695 | Putative glucanohydrolase PEP1A; alpha-glucan bios | 88.07 | |
| 3aam_A | 270 | Endonuclease IV, endoiv; DNA repair, base excision | 88.03 | |
| 2p0o_A | 372 | Hypothetical protein DUF871; structural genomics, | 87.35 | |
| 3ues_A | 478 | Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr | 87.11 | |
| 1ea9_C | 583 | Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A | 86.97 | |
| 4gqr_A | 496 | Pancreatic alpha-amylase; glycosyl hydrolase, diab | 86.96 | |
| 3dhu_A | 449 | Alpha-amylase; structural genomics, hydrolase, gly | 86.45 | |
| 3lpf_A | 605 | Beta-glucuronidase; alpha/beta barrel, sugar-bindi | 86.05 | |
| 3aal_A | 303 | Probable endonuclease 4; endoiv, DNA repair, base | 85.92 | |
| 3hn3_A | 613 | Beta-G1, beta-glucuronidase; lysosomal enzyme, aci | 85.66 | |
| 3cqj_A | 295 | L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barre | 85.49 | |
| 1qtw_A | 285 | Endonuclease IV; DNA repair enzyme, TIM barrel, tr | 84.36 | |
| 3ktc_A | 333 | Xylose isomerase; putative sugar isomerase, struct | 83.82 | |
| 1gcy_A | 527 | Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b | 83.8 | |
| 1k77_A | 260 | EC1530, hypothetical protein YGBM; TIM barrel, str | 83.63 | |
| 2qul_A | 290 | D-tagatose 3-epimerase; beta/alpha barrel, isomera | 83.43 | |
| 2z1k_A | 475 | (NEO)pullulanase; hydrolase, structural genomics, | 83.32 | |
| 2x7v_A | 287 | Probable endonuclease 4; DNA repair protein, metal | 82.92 | |
| 1g94_A | 448 | Alpha-amylase; beta-alpha-8-barrel, 3 domain struc | 82.91 | |
| 2hk0_A | 309 | D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00 | 82.76 | |
| 1x7f_A | 385 | Outer surface protein; structural genomics, unknow | 82.36 | |
| 2xn2_A | 732 | Alpha-galactosidase; hydrolase, glycosidase; HET: | 81.83 | |
| 1hvx_A | 515 | Alpha-amylase; hydrolase, glycosyltransferase, the | 81.56 | |
| 1wzl_A | 585 | Alpha-amylase II; pullulan, GH-13, alpha-amylase f | 81.55 | |
| 3fn9_A | 692 | Putative beta-galactosidase; structural genomics, | 81.4 | |
| 3qc0_A | 275 | Sugar isomerase; TIM barrel, structural genomics, | 81.4 | |
| 2aaa_A | 484 | Alpha-amylase; glycosidase; 2.10A {Aspergillus nig | 81.21 | |
| 3cmg_A | 667 | Putative beta-galactosidase; structural genomics, | 81.2 | |
| 2wc7_A | 488 | Alpha amylase, catalytic region; CD/PUL-hydrolyzin | 80.7 | |
| 1j0h_A | 588 | Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 | 80.53 | |
| 3edf_A | 601 | FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c | 80.52 | |
| 1qho_A | 686 | Alpha-amylase; glycoside hydrolase, starch degrada | 80.02 |
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-101 Score=885.08 Aligned_cols=486 Identities=27% Similarity=0.404 Sum_probs=392.2
Q ss_pred CeeEEEecceEEECCEEEEEEEEEeeCCCCC-ccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHH
Q 009890 24 GANVTYDHRAVVIGGKRRVLISGSIHYPRST-PEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVK 102 (523)
Q Consensus 24 ~~~vt~d~~~l~idGk~~~l~sG~iHy~R~~-~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~ 102 (523)
...|+||+++|+|||||++++||++||+|+| |++|+++|+|||++|+|+|++|||||.|||+||+|||+|++||++||+
T Consensus 3 ~~~v~~d~~~~~idG~p~~l~sG~~hy~r~p~~~~W~d~l~kmka~G~NtV~~yvfW~~hEP~~G~fdF~g~~dL~~fl~ 82 (971)
T 1tg7_A 3 QKYVTWDEHSIFVNGERLMIFSGEVHPYRLPVASLYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFD 82 (971)
T ss_dssp CSSEEECSSCEEETTEEECEEEEECCGGGSCCGGGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHH
T ss_pred cceEEEcCCEEEECCeEEEEEEEEECcccCCchHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCeecccchHHHHHHHH
Confidence 3579999999999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccc
Q 009890 103 LVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIEN 182 (523)
Q Consensus 103 la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIEN 182 (523)
+|+++||+|||||||||||||++||+|.||.++|+ .+|++||.|++++++|+++|+++++++ ++.+|||||||||||
T Consensus 83 ~a~e~Gl~ViLr~GPyi~aE~~~GG~P~WL~~~p~-~lR~~~p~y~~~~~~~~~~l~~~~~~~--~~~~ggpVI~~QveN 159 (971)
T 1tg7_A 83 AAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVDG-ILRTSDEAYLKATDNYASNIAATIAKA--QITNGGPIILYQPEN 159 (971)
T ss_dssp HHHHHTCEEEEECCSCCCTTBGGGGCCGGGGGCSS-CTTSSCHHHHHHHHHHHHHHHHHHHHT--BGGGTSSEEEECCSS
T ss_pred HHHHcCCEEEEecCCcccceecCCCcceeecccCC-EecCCCHHHHHHHHHHHHHHHHHHhhh--hhcCCCCEEEEeccc
Confidence 99999999999999999999999999999999887 699999999999999999999999955 457999999999999
Q ss_pred cccccc-cccCcccHHHHHHHHHHHHhcCCCcceEEccCC----CCCCcccc---------CCCCcccCC--------C-
Q 009890 183 EYGNID-SAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQS----DAPDPIIN---------TCNGFYCDQ--------F- 239 (523)
Q Consensus 183 Eyg~~~-~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~~~----~~p~~vi~---------~~ng~~~~~--------~- 239 (523)
|||+.+ +.++..+++||+||+++++++|++|||+||++. ..+..+.. ++.|++|.. |
T Consensus 160 Eyg~~~~~~~~~~~~~Y~~~l~~~~r~~g~~vPl~tn~~~~~~~~~~~~~~g~ldv~~~D~Yp~g~~~~~~~~~~~~~~~ 239 (971)
T 1tg7_A 160 EYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGNLP 239 (971)
T ss_dssp CCCCBCTTCCCCSCHHHHHHHHHHHHHTTCCSCBBCCBSSSSCTTCTTSCTTCCSBCEEEECTTCSCCSCTTCCCTTCSC
T ss_pred ccCcccccccchhHHHHHHHHHHHHHHhCCCeeEEEecCccccccccccccCceeEEecCCCccccccCCcccccccccc
Confidence 999753 334456999999999999999999999999974 22322111 223566721 1
Q ss_pred -------CCCCCCCCceEeeeccccccccCCCCCCCCHHHHHHHHH-----HHHhcCCeeeeeeeeccCCCCCCCCCCCc
Q 009890 240 -------TPNSNNKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVA-----RFFQRGGTFQNYYMYHGGTNFDRTSGGPF 307 (523)
Q Consensus 240 -------~~~~~~~P~~~tE~~~Gwf~~wG~~~~~r~~~d~~~~~~-----~~~~~g~s~~nyYM~hGGTNfG~~~G~~~ 307 (523)
...+|++|.|++|+|+|||++||+..++|++++.+.+++ ..++.|++++||||||||||||++ +++.
T Consensus 240 ~~~~d~~r~~~p~~P~~~~E~~~Gw~~~Wg~~~~~~~~~~~~~~~~~~~~~~~la~Ga~~vnyYm~~GGTNfG~~-~g~~ 318 (971)
T 1tg7_A 240 TYFHTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLNLYMIFGGTNWGNL-GHPG 318 (971)
T ss_dssp CCHHHHHHHHCTTSCCEEEEEESSCCCCTTCCCHHHHHHHTSHHHHHHHHHHHHTTTCSEEEEECSBCCBCCTTC-BCTT
T ss_pred hhHHHHhhccCCCCCEEEEecCCcCccCCCCCccccccccChHHHHHHHHHHHHHCCCCEEEEEEeecccCCccc-CCCC
Confidence 124578999999999999999999888777766644443 456789999999999999999999 4667
Q ss_pred ccccccCCCCCCcCCCCCChhHHHHHHHHHHHHHhhhcccCCCCCCC--------------CCCC--CceEEEE------
Q 009890 308 ISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYP--------------SLGP--NLEATVY------ 365 (523)
Q Consensus 308 ~~TSYDy~Api~E~G~~~~pKy~~lk~lh~~i~~~~~~L~~~~~~~~--------------~lg~--~~~~~v~------ 365 (523)
.+|||||+|||+|+|++++|||.++|+||++|+.+++ ++.+++... .+.+ ..++.+|
T Consensus 319 ~~tSYDy~Apl~E~G~~t~~ky~elr~l~~~l~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a~f~~~r~~~ 397 (971)
T 1tg7_A 319 GYTSYDYGSAISESRNITREKYSELKLLGNFAKVSPG-YLVANPGDLSTSTYTNTADLTVTPLLGSNSSASSFFVIRHSD 397 (971)
T ss_dssp SCSBCCTTCSBCTTCCCCSHHHHHHHHHHHHHHTCHH-HHTSEECCCBSSSSBSCTTEEEEEEECSSTTSCEEEEEEESS
T ss_pred cceeeccCceeCcCCCcchhHHHHHHHHHHHHHhChH-hhccCCccCccccccCCCceEEEEeecCCCCceEEEEEeccC
Confidence 8999999999999999955999999999999999987 443332211 1111 1111111
Q ss_pred ----------------------------------------------------------E--c-C----------------
Q 009890 366 ----------------------------------------------------------K--T-G---------------- 368 (523)
Q Consensus 366 ----------------------------------------------------------~--~-~---------------- 368 (523)
. . +
T Consensus 398 ~~~~~~~~~~l~v~ts~g~~~iP~~~g~i~l~gr~ski~~~d~~~g~~~l~ysTa~~~t~~~~~~~~v~vly~~~g~~~e 477 (971)
T 1tg7_A 398 YSSQASVEYKLTVPTSAGNLTIPQLGGSLTLSGRDSKIHVTDYDVAGTNILYSTAEVFTWKKFNNEKVLVLYGGPGEHHE 477 (971)
T ss_dssp TTCCCCEEECEEEEETTEEEEECSSSSCEEECTTCCEEEEEEEEETTEEEEEESSEEEEEEEETTEEEEEEEECTTCEEE
T ss_pred CCCCCceEEEEEEecCCCCEeccCCCCceEECCCceEEEecccccCCeEEEEeeeeeEEEEEECCceEEEEEcCCCCceE
Confidence 0 0 0
Q ss_pred ------C-----Cce-E---------EEEEeCCCCeeEE-EEECCe-----------EEEecC-----------------
Q 009890 369 ------S-----GLC-S---------AFLANIGTNSDVT-VKFNGN-----------SYLLPA----------------- 398 (523)
Q Consensus 369 ------~-----~~~-~---------~Fl~N~~~~~~~~-V~f~~~-----------~~~lp~----------------- 398 (523)
. ++| + .|+.|.+.....+ |+|++. .|-+|+
T Consensus 478 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~lld~~~A~~~w~p~~~~~~~~~~~~~~~~~~ 557 (971)
T 1tg7_A 478 FAVSGASSSSVVEGSSSGISSKKVGKALVVAWDVSTARRIVQVGSLKVFLLDRNSAYNYWVPQVPTKGTAPGYSNQETTA 557 (971)
T ss_dssp EEEETCCCCEEEESCCTTCEEEEETTEEEEEEECCSSCEEEEETTEEEEEEEHHHHTTEECCCCCSSSSCCCCCSHHHHH
T ss_pred EEEecCcceeeecCcccceeEeccCceEEEeeccCCceEEEEECCEEEEEechHhhheEecccccCccccCcccccccCC
Confidence 0 123 2 4555544433334 677755 677777
Q ss_pred -----------eeEEE-------------------c--C-CCCeEEeecceecCccccee-ee-eccc-cccccCCCCCC
Q 009890 399 -----------WSVSI-------------------L--P-DCKNVVFNTAKINSVTLVPS-FS-RQSL-QVAADSSDAIG 442 (523)
Q Consensus 399 -----------~svsI-------------------l--p-~~~~v~~~Ta~v~~q~~~~~-~~-~~~~-~~~~~~~~~~~ 442 (523)
||+|| + | +|++|+|||++|.+|++... ++ .... ......+....
T Consensus 558 ~~v~v~g~ylvrsasi~~~~l~l~gd~~~~t~~ev~~~p~~~~~v~~Ng~~v~~~~~~~g~~~~~~~~~~~~~~~P~l~~ 637 (971)
T 1tg7_A 558 SSIIVKAGYLVRSAYLDGNDLHIQADFNATTPIEVVGAPSGAKNLVINGKKTQTKVDKNGIWSASVAYTAPKVQLPSLKS 637 (971)
T ss_dssp TCCEEECSSEEEEEEEETTEEEEEEEBSSCEEEEEESCCTTCCEEEETTEEECCEECTTCCEEEEECCCCCCCCCCCGGG
T ss_pred ceEEEecCcEEEEEEEeCCEEEEEeecCCCceEEEEecCCCccEEEECCEEceeEEccCccEEEecCCCcccccccccCC
Confidence 99999 7 6 99999999999999988743 22 1100 00011111234
Q ss_pred cceeEeec---cCCCCCCCccccchhhhhhhc----c----CCCcee------eEEEeEEEecCCCccccCCCeeEEEEe
Q 009890 443 SGWSYINE---PVGISKDDAFTKPGLLEQINT----T----ADQSDY------LWYSLSTNIKADEPLLEDGSKTVLHVQ 505 (523)
Q Consensus 443 ~~W~~~~E---~~~~~~~~~~~~~~llEq~~~----T----~D~sDY------LWY~T~v~i~~~~~~~~~~~~~~L~v~ 505 (523)
++|+.+.| ..+.+++...+...+.||.|+ | +|.||| +||+|+|+++.++ ..|+++
T Consensus 638 l~Wk~~~~~pe~~~~~dDs~W~~~~l~~~~n~~~p~t~p~~~~~sdYGf~~G~lwYR~~F~~~~~~--------~~L~~~ 709 (971)
T 1tg7_A 638 LKWKSVDTLPEAKNTYDDSAWTSADHAYTNNSAHSLQTPTSLFASDYGYHTGALLFRGHFTANGKE--------KTFFVQ 709 (971)
T ss_dssp SCCEEEESCGGGSTTCCCTTSEECCCSSCCCTTCCCSSSSCCBGGGGTCCSSCEEEEEEEECCSCC--------CEEEEE
T ss_pred CCeEEeCCCccccCCCCCCCceECCCcccccccCCCCCCccCCCCccCccCceEEEEEEEECCCcc--------eEEEEE
Confidence 58999987 456678889999999999999 8 899999 9999999987654 389999
Q ss_pred ---ecCcEEEEEEcCeeeec
Q 009890 506 ---SLGHALHAFINGKLVGE 522 (523)
Q Consensus 506 ---s~gh~lh~FVNg~~~G~ 522 (523)
+.+|++||||||+|+|+
T Consensus 710 ~~gG~~~~~~VwvNG~~lGs 729 (971)
T 1tg7_A 710 TKGGTAYGHSIWINETYVGS 729 (971)
T ss_dssp EECSTTCCEEEEETTEEEEE
T ss_pred ecCcccceEEEEECCEEEee
Confidence 99999999999999997
|
| >3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-97 Score=838.69 Aligned_cols=391 Identities=27% Similarity=0.400 Sum_probs=328.7
Q ss_pred CCeeEEEecceEEECCEEEEEEEEEeeCCCCC-ccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHH
Q 009890 23 FGANVTYDHRAVVIGGKRRVLISGSIHYPRST-PEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFV 101 (523)
Q Consensus 23 ~~~~vt~d~~~l~idGk~~~l~sG~iHy~R~~-~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl 101 (523)
.+..|+||+++|+|||||++++||++||+|+| |++|+|+|+|||++|+|+|++|||||.|||+||+|||+|++||++||
T Consensus 22 ~~~~v~~d~~~~~idG~p~~i~sGeiHy~R~p~pe~W~d~l~kmKa~GlNtV~tYV~Wn~hEP~eG~fdFsg~~dL~~fl 101 (1003)
T 3og2_A 22 LQNIVTWDEHSLFVHGERVVIFSGEVHPFRLPVPSLYLDVFHKIKALGFNTVSFYVDWALLEGKPGRFRADGIFSLEPFF 101 (1003)
T ss_dssp SSSSEEECSSCEEETTEEECEEEEEECGGGCCCGGGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHH
T ss_pred CcceEEEcCCeEEECCEEEEEEEEEECCccCCCHHHHHHHHHHHHHcCCCEEEEecchhhcCCCCCEecccchhhHHHHH
Confidence 46789999999999999999999999999997 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccc
Q 009890 102 KLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIE 181 (523)
Q Consensus 102 ~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIE 181 (523)
++|+|+||+|||||||||||||++||+|.||.+.|+ ++|++||.|++++++|+++|+++++ ++++++||||||+|||
T Consensus 102 ~la~e~GL~VILRpGPYi~aEw~~GG~P~WL~~~~~-~lRt~~p~yl~~~~~~~~~l~~~~~--~~~~~~GGpII~~QVE 178 (1003)
T 3og2_A 102 EAATKAGIYLLARPGPYINAEVSGGGFPGWLQRVKG-KLRTDAPDYLHATDNYVAHIASIIA--KAQITNGGPVILYQPE 178 (1003)
T ss_dssp HHHHHHTCEEEEEEESCCCTTBGGGGCCGGGGGCCS-CTTSCCHHHHHHHHHHHHHHHHHHH--HTBGGGTSSEEEEEES
T ss_pred HHHHHcCCEEEecCCcceeeecCCCCccchhccCCC-eecCCCHHHHHHHHHHHHHHHHHHH--HhhccCCCCEEEEEcc
Confidence 999999999999999999999999999999998775 6999999999999999999999999 4556999999999999
Q ss_pred ccccccccccCcccHHHHHHHHHHHHhcCCCcceEEccCC----CCCCcccc---------CCCCcccCCCC--------
Q 009890 182 NEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQS----DAPDPIIN---------TCNGFYCDQFT-------- 240 (523)
Q Consensus 182 NEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~~~----~~p~~vi~---------~~ng~~~~~~~-------- 240 (523)
||||++.+.++.++++||+||++|++++|++|||+||++. .+|+.++. +|+|++|+++.
T Consensus 179 NEYG~~~~~~~~~d~~Ym~~L~~~~~~~Gi~VPl~t~d~~~~~~~~~g~~~g~vdiyg~d~yp~g~~c~~~~~w~~~~~~ 258 (1003)
T 3og2_A 179 NEYSGAAEGVLFPNKPYMQYVIDQARNAGIIVPLINNDAFPGGTGAPGTGLGSVDIYGHDGYPLGFDCAHPSAWPDNGLP 258 (1003)
T ss_dssp SCCCCBCTTSCSSCHHHHHHHHHHHHHTTCCSCBBCCBSSSCCTTCTTSCTTCCSBCEEEECTTCSCTTSTTCCCTTCSC
T ss_pred cccCcccccccCCCHHHHHHHHHHHHHcCCceEEEEcCCccccccCCCccccceeeeccccccCcccccCCcccccccch
Confidence 9999977666777999999999999999999999999986 34543322 35788885321
Q ss_pred --------CCCCCCCceEeeeccccccccCCCCCCCCHHHHHHHHHHH-----HhcCCeeeeeeeeccCCCCCCCCCCCc
Q 009890 241 --------PNSNNKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARF-----FQRGGTFQNYYMYHGGTNFDRTSGGPF 307 (523)
Q Consensus 241 --------~~~~~~P~~~tE~~~Gwf~~wG~~~~~r~~~d~~~~~~~~-----~~~g~s~~nyYM~hGGTNfG~~~G~~~ 307 (523)
+.+|++|+|++|||+|||++||+++++||+++++.+++++ ++.|++++||||||||||||+++ ++.
T Consensus 259 ~~~~~~~~~~~p~~P~~~~Ef~~GWfd~WG~~~~~~~~~~~~~~~~~~~~~~~l~~G~s~vN~YM~hGGTNFG~~~-~~~ 337 (1003)
T 3og2_A 259 TTWRQDHLNISPSTPFSLVEFQGGAFDPFGGWGFEQCSALVNHEFERVFYKNNMAAGVTIFNIYMTFGGTNWGNLG-HPG 337 (1003)
T ss_dssp CCHHHHHHHHCTTSCCEEEEEESSCCCCTTCCCHHHHHHHSSHHHHHHHHHHHHHTTCSEEEEEEEECCBCCTTCB-CTT
T ss_pred HHHHHHhhhcCCCCCeEEEeeccccccccCCCCCCCChhhhhHHHHHHHHHHHHhcCCceEEEEEeccccCccccC-CCC
Confidence 2478999999999999999999999999998888777554 56799999999999999999994 678
Q ss_pred ccccccCCCCCCcCCCCCChhHHHHHHHHHHHHHhhhcccCCCCCCCC---CCCCceEEEEE--cCCCceEEEEEeCCC-
Q 009890 308 ISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAALVATDPTYPS---LGPNLEATVYK--TGSGLCSAFLANIGT- 381 (523)
Q Consensus 308 ~~TSYDy~Api~E~G~~~~pKy~~lk~lh~~i~~~~~~L~~~~~~~~~---lg~~~~~~v~~--~~~~~~~~Fl~N~~~- 381 (523)
++|||||||||+|+|++++|||.+||.||.|++.+ ++|+.++|...+ .-++.+..++. +.+++.|.|+.+.+.
T Consensus 338 ~~TSYDYdAPL~E~G~~~t~Ky~~lK~l~~fl~~~-~~~l~~~~~~~~~~~~~~~~~i~~t~lr~~~~~~Fyvvrh~~~~ 416 (1003)
T 3og2_A 338 GYTSYDYGASIREDRRIDREKYSELKLQGQFLKVS-PGYITATPENATQGVYSDSQNIVITPLLAKESGDFFVVRHANYS 416 (1003)
T ss_dssp SCSBCCTTCSBCTTCCCCSHHHHHHHHHHHHHHTC-THHHHSEECCCBSSSSSSCSSEEEEEEECSSSCEEEEEEESSTT
T ss_pred ccccccCCCcccccCCcCchHHHHHHHHHHHHhcC-hHhhccccccCCCccccCCCceEEEEEecCCCceEEEEEccCCC
Confidence 89999999999999999889999999999999964 556555543222 22344555654 444567777744332
Q ss_pred ---CeeEEEEEC--CeEEEecC---------eeEEEcC-----CCCeEEeecceec
Q 009890 382 ---NSDVTVKFN--GNSYLLPA---------WSVSILP-----DCKNVVFNTAKIN 418 (523)
Q Consensus 382 ---~~~~~V~f~--~~~~~lp~---------~svsIlp-----~~~~v~~~Ta~v~ 418 (523)
..+++++++ .+.++||. +..-|++ ...+++|.||+|-
T Consensus 417 s~~~~~~~l~l~ts~G~~tiP~~~g~ltL~grdskI~vtdy~~g~~~L~YSTAevl 472 (1003)
T 3og2_A 417 STDTASYTVKLPTSAGDLTIPQLGGSLTLTGRDSKIHVTDYPVGKFTLLYSTAEIF 472 (1003)
T ss_dssp CCSCEEECEEECCTTCCEEECTTSCCEEECTTCEEEEEEEEEETTEEEEEESSEEE
T ss_pred CCCcceEEEEecCCCCcEEeCCCCCeEEECCccceEEeeccccCCeEEEEEccceE
Confidence 233334433 45556654 3333444 4678999999984
|
| >4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-95 Score=793.29 Aligned_cols=301 Identities=34% Similarity=0.631 Sum_probs=279.9
Q ss_pred eEEEecceEEECCEEEEEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHH
Q 009890 26 NVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVA 105 (523)
Q Consensus 26 ~vt~d~~~l~idGk~~~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~ 105 (523)
+++++ ++|+|||||++++||++||+|+|+++|+++|+|||++|+|+|++|||||.|||+||+|||+|++||++||++|+
T Consensus 3 ~F~i~-~~f~~dG~p~~i~~G~~Hy~r~p~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a~ 81 (595)
T 4e8d_A 3 RFEIR-DDFYLDGKSFKILSGAIHYFRVPPEDWYHSLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIAQ 81 (595)
T ss_dssp CEEES-SSEEETTEECCCEEEEECGGGSCGGGHHHHHHHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHH
T ss_pred eEEeC-CEEEECCEEEEEEEEEeChhhCCHHHHHHHHHHHHHcCCCEEEEeccHHHcCCCCCeecccchhhHHHHHHHHH
Confidence 56777 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccc
Q 009890 106 EAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185 (523)
Q Consensus 106 ~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg 185 (523)
++||+|||||||||||||++||+|.||.++| +++|++||.|++++++|+++|+++|+ ++++++||||||+|||||||
T Consensus 82 ~~Gl~VilrpGPYi~aEw~~GG~P~WL~~~p-~~lRt~~p~y~~~~~~~~~~l~~~l~--~~~~~~GgpVI~~QvENEyG 158 (595)
T 4e8d_A 82 DLGLYAIVRPSPFICAEWEFGGLPAWLLTKN-MRIRSSDPAYIEAVGRYYDQLLPRLV--PRLLDNGGNILMMQVENEYG 158 (595)
T ss_dssp HTTCEEEEECCSCCCTTBGGGGCCGGGGGSS-SCSSSSCHHHHHHHHHHHHHHGGGTG--GGBGGGTSCEEEEESSSSGG
T ss_pred HcCCEEEEecCCceecccCCCcCChhhccCC-ceeccCCHHHHHHHHHHHHHHHHHHH--HHhcccCCCEEEEEcccccc
Confidence 9999999999999999999999999999988 78999999999999999999999999 77889999999999999999
Q ss_pred ccccccCcccHHHHHHHHHHHHhcCCCcceEEccCCC-------CC--CccccCCC-Cccc-CCC------CCCCCCC-C
Q 009890 186 NIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSD-------AP--DPIINTCN-GFYC-DQF------TPNSNNK-P 247 (523)
Q Consensus 186 ~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~~~~-------~p--~~vi~~~n-g~~~-~~~------~~~~~~~-P 247 (523)
++ + ++++||+||+++++++|++|||+||++.. +. +.+++||| |.+| +.| .+++|++ |
T Consensus 159 ~~----~-~~~~Y~~~l~~~~~~~Gi~vpl~t~d~~~~~~~~~G~~~~~~~~~t~nfg~~~~~~~~~~~~~~~~~p~~~P 233 (595)
T 4e8d_A 159 SY----G-EDKAYLRAIRQLMEECGVTCPLFTSDGPWRATLKAGTLIEEDLFVTGNFGSKAPYNFSQMQEFFDEHGKKWP 233 (595)
T ss_dssp GT----C-CCHHHHHHHHHHHHHTTCCSCEEEEECSSHHHHHHHCCGGGTCEEEEEESSCHHHHHHHHHHHHHHTTCCCC
T ss_pred cc----C-CcHHHHHHHHHHHHHcCCcEEEEEccCcchhcccCCccCCCCeEEEeeCCCchhHhHHHHHHhhhcCCCCCC
Confidence 75 3 78999999999999999999999999853 22 67889998 7777 233 3556888 9
Q ss_pred ceEeeeccccccccCCCCCCCCHHHHHHHHHHHHhcCCeeeeeeeeccCCCCCCCCCCC----c---ccccccCCCCCCc
Q 009890 248 KMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGP----F---ISTSYDYDAPLDE 320 (523)
Q Consensus 248 ~~~tE~~~Gwf~~wG~~~~~r~~~d~~~~~~~~~~~g~s~~nyYM~hGGTNfG~~~G~~----~---~~TSYDy~Api~E 320 (523)
+|++|+|+|||++||+++++|+++|++..+++++++| ++||||||||||||+++|++ + .+|||||||||+|
T Consensus 234 ~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g--s~N~YM~hGGTNfG~~~Ga~~~~~~~~p~~TSYDYdApi~E 311 (595)
T 4e8d_A 234 LMCMEFWDGWFNRWKEPIITRDPKELADAVREVLEQG--SINLYMFHGGTNFGFMNGCSARGTLDLPQVTSYDYDALLDE 311 (595)
T ss_dssp CEEEEEECSCCCBTTSCCCCCCHHHHHHHHHHHHHHS--EEEEEEEECCBCCTTCBCEEEETTEEEEBCSBCCTTCSBCT
T ss_pred eEEEeeccccccccCCCCCCCCHHHHHHHHHHHHHcC--CceEEecccccCcccccCCCCCCCCCCCCCCccCCCCccCc
Confidence 9999999999999999999999999999999999999 58999999999999999875 2 4799999999999
Q ss_pred CCCCCChhHHHHHHHHHH
Q 009890 321 YGLIRQPKWGHLKDLHKA 338 (523)
Q Consensus 321 ~G~~~~pKy~~lk~lh~~ 338 (523)
+|++ +|||.+||++..-
T Consensus 312 ~G~~-t~Ky~~lr~~i~~ 328 (595)
T 4e8d_A 312 EGNP-TAKYLAVKKMMAT 328 (595)
T ss_dssp TSCB-CHHHHHHHHHHHH
T ss_pred CCCc-cHHHHHHHHHHHH
Confidence 9999 5999999987654
|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-94 Score=789.81 Aligned_cols=304 Identities=34% Similarity=0.603 Sum_probs=281.2
Q ss_pred cCCeeEEEecceEEECCEEEEEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHH
Q 009890 22 SFGANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFV 101 (523)
Q Consensus 22 ~~~~~vt~d~~~l~idGk~~~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl 101 (523)
...+.|+||+++|+|||||++++||++||+|+|+++|+++|+|||++|+|+|++||+||.|||+||+|||+|++||++||
T Consensus 6 ~r~~~v~~d~~~f~ldGkp~~i~sG~~Hy~r~p~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~DL~~fl 85 (654)
T 3thd_A 6 QRMFEIDYSRDSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFL 85 (654)
T ss_dssp CCCEEEETTTTEEEETTEEECCEEEECCGGGSCGGGHHHHHHHHHHTTCSEEEEECCHHHHCSBTTBCCCSGGGCHHHHH
T ss_pred CCcEEEEEcCCEEEECCEEEEEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCccCccchHHHHHHH
Confidence 36788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccc
Q 009890 102 KLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIE 181 (523)
Q Consensus 102 ~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIE 181 (523)
++|+++||+|||||||||||||++||+|.||.++|++.+|++||.|++++++|+++|+++|+ ++++++||||||||||
T Consensus 86 ~~a~~~GL~ViLr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~~p~y~~~~~~~~~~l~~~l~--~~~~~~ggpVI~~QvE 163 (654)
T 3thd_A 86 RLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESILLRSSDPDYLAAVDKWLGVLLPKMK--PLLYQNGGPVITVQVE 163 (654)
T ss_dssp HHHHHTTCEEEEECCSCCCTTBGGGGCCGGGGGSTTCCSSSCCHHHHHHHHHHHHHHHHHHG--GGBGGGTSSEEEEECS
T ss_pred HHHHHcCCEEEeccCCccccccCCCcCChHHhcCCCceEecCCHHHHHHHHHHHHHHHHHhh--hhhccCCCCEEEEEec
Confidence 99999999999999999999999999999999989999999999999999999999999999 7889999999999999
Q ss_pred ccccccccccCcccHHHHHHHHHHHHhc-CCCcceEEccCCCCCCccccCC---CCccc-CCCCCC-------------C
Q 009890 182 NEYGNIDSAYGAAGKSYIKWAAGMALSL-DTGVPWVMCQQSDAPDPIINTC---NGFYC-DQFTPN-------------S 243 (523)
Q Consensus 182 NEyg~~~~~~g~~~~~y~~~l~~~~~~~-g~~vP~~~~~~~~~p~~vi~~~---ng~~~-~~~~~~-------------~ 243 (523)
||||++ +.|+++||+||++++++. |++||+++|++ +.+.+.+| +|.+| .+|.++ +
T Consensus 164 NEyG~y----~~~d~~Ym~~l~~~~~~~~Gi~v~l~t~D~---~~~~~~~~g~~~g~~~t~~f~~~~~~~~~~~~~~~~~ 236 (654)
T 3thd_A 164 NEYGSY----FACDFDYLRFLQKRFRHHLGDDVVLFTTDG---AHKTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKCE 236 (654)
T ss_dssp SCGGGS----SCCCHHHHHHHHHHHHHHHCSSSEEEEEEE---SSHHHHHHHCBTTBEEEEECCTTSCHHHHHHHHHHHC
T ss_pred cccccc----ccccHHHHHHHHHHHHHhcCCceeeEeecC---CccccccCCCcCCcceecccCCCccHHHHHHHHHHhC
Confidence 999974 568999999999999995 99999999965 33333344 56666 445432 4
Q ss_pred CCCCceEeeeccccccccCCCCCCCCHHHHHHHHHHHHhcCCeeeeeeeeccCCCCCCCCCCC--c--ccccccCCCCCC
Q 009890 244 NNKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGP--F--ISTSYDYDAPLD 319 (523)
Q Consensus 244 ~~~P~~~tE~~~Gwf~~wG~~~~~r~~~d~~~~~~~~~~~g~s~~nyYM~hGGTNfG~~~G~~--~--~~TSYDy~Api~ 319 (523)
|++|+|++|||+|||++||++++.|++++++..++++++.|+| +||||+|||||||+|+|++ + ++|||||||||+
T Consensus 237 p~~P~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s-~N~YM~hGGTNfG~~~Ga~~~~~~~~TSYDYdApi~ 315 (654)
T 3thd_A 237 PKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGAS-VNLYMFIGGTNFAYWNGANSPYAAQPTSYDYDAPLS 315 (654)
T ss_dssp SSSCCEEEEEESSCCCCTTSCCCCCCHHHHHHHHHHHHHTTCE-EEEECSBCCBCCTTCBCEETTTEECCSBCCTTCSBC
T ss_pred CCCCeEEeccccccCCcCCCCCCCCCHHHHHHHHHHHHhcCCc-eEEEecccccccccccCCCCCCCCccccCcCCCccc
Confidence 8899999999999999999999999999999999999999988 6999999999999999876 4 799999999999
Q ss_pred cCCCCCChhHHHHHHHH
Q 009890 320 EYGLIRQPKWGHLKDLH 336 (523)
Q Consensus 320 E~G~~~~pKy~~lk~lh 336 (523)
|+|++ +|||.+||++.
T Consensus 316 E~G~~-t~Ky~~lr~li 331 (654)
T 3thd_A 316 EAGDL-TEKYFALRNII 331 (654)
T ss_dssp TTCCB-CHHHHHHHHHH
T ss_pred cccCc-cHHHHHHHHHH
Confidence 99999 59999999763
|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-90 Score=762.55 Aligned_cols=397 Identities=31% Similarity=0.585 Sum_probs=335.5
Q ss_pred CeeEEEecceEEECCEEEEEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHH
Q 009890 24 GANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKL 103 (523)
Q Consensus 24 ~~~vt~d~~~l~idGk~~~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~l 103 (523)
..+|++|+++|+|||||++++||++||+|+++++|+++|++||++|+|+|++||||+.|||+||+|||+|..++++||++
T Consensus 5 ~r~v~~~~~~f~lnGkp~~i~gg~~Hy~r~~~e~w~~dl~~mK~~G~N~Vrt~v~W~~hEP~~G~ydf~gl~~l~~fl~l 84 (612)
T 3d3a_A 5 EGTFEVGKNTFLLNGEPFVVKAAEIHYPRIPKEYWEHRIKMCKALGMNTICLYVFWNFHEPEEGRYDFAGQKDIAAFCRL 84 (612)
T ss_dssp CCCEEECSSSEEETTEEECCEEEEECGGGSCGGGHHHHHHHHHHHTCCEEEEECCHHHHCSSTTCCCCSGGGCHHHHHHH
T ss_pred cceEEEeCCEEEECCEEEEEEEEEecCccCCHHHHHHHHHHHHHcCCCEEEEcChHHhcCCCCCccChhHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccc
Q 009890 104 VAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENE 183 (523)
Q Consensus 104 a~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENE 183 (523)
|+++||+||||+||||||||++||+|.||...+++.+|++||.|++++++|+++|+++++ +++++++|||||||||||
T Consensus 85 a~e~GL~VIl~~gpyi~~ew~~gG~P~Wl~~~~~~~~r~~dp~y~~~~~~~~~~l~~r~~--~~~~~n~p~II~wqIeNE 162 (612)
T 3d3a_A 85 AQENGMYVIVRPGPYVCAEWEMGGLPWWLLKKKDIKLREQDPYYMERVKLFLNEVGKQLA--DLQISKGGNIIMVQVENE 162 (612)
T ss_dssp HHHTTCEEEEECCSCCCTTBGGGGCCGGGGGSTTCCSSSCCHHHHHHHHHHHHHHHHHHG--GGBGGGTSSEEEEECSSC
T ss_pred HHHCCCEEEEecCcccccccccCCCchhhccCCCceecCCCHHHHHHHHHHHHHHHHHHh--hhhhccCCCEEEEeeccc
Confidence 999999999999999999999999999999877888999999999999999999999999 688999999999999999
Q ss_pred ccccccccCcccHHHHHHHHHHHHhcCC-CcceEEccCC-----CCCCccccCCCCccc-----CCCC---CCCCCCCce
Q 009890 184 YGNIDSAYGAAGKSYIKWAAGMALSLDT-GVPWVMCQQS-----DAPDPIINTCNGFYC-----DQFT---PNSNNKPKM 249 (523)
Q Consensus 184 yg~~~~~~g~~~~~y~~~l~~~~~~~g~-~vP~~~~~~~-----~~p~~vi~~~ng~~~-----~~~~---~~~~~~P~~ 249 (523)
||++ + .++.|++++++++++.|+ +||+++|+.. ...+.+++++| |.| +.+. +.+|++|.|
T Consensus 163 yg~y----g-~~~~y~~~l~~~l~~~g~~~vp~~~~~~~~~~~~~~~~~~~~t~n-f~s~~~~~~~~~~~~~~~p~~P~~ 236 (612)
T 3d3a_A 163 YGAF----G-IDKPYISEIRDMVKQAGFTGVPLFQCDWNSNFENNALDDLLWTIN-FGTGANIDEQFKRLKELRPDTPLM 236 (612)
T ss_dssp GGGT----C-CCHHHHHHHHHHHHHHTCCSSCEEEEECTTTGGGTCCTTSEEEEE-EETTCCHHHHHHHHHHHCTTSCCE
T ss_pred cccc----C-chHHHHHHHHHHHHHcCCCchhheecccccccccCCCCCcccccc-cCCCccHHHHHHHHHHhccCCCce
Confidence 9974 3 478999999999999996 9999999863 23334556665 443 2232 568999999
Q ss_pred EeeeccccccccCCCCCCCCHHHHHHHHHHHHhcCCeeeeeeeeccCCCCCCCCCC--C-c--ccccccCCCCCCcCCCC
Q 009890 250 WTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGG--P-F--ISTSYDYDAPLDEYGLI 324 (523)
Q Consensus 250 ~tE~~~Gwf~~wG~~~~~r~~~d~~~~~~~~~~~g~s~~nyYM~hGGTNfG~~~G~--~-~--~~TSYDy~Api~E~G~~ 324 (523)
++|+|+|||++||++++.|++++++..+++++++|+| +||||||||||||+++|+ + | ++|||||||||+|+|++
T Consensus 237 ~~E~~~Gwf~~wg~~~~~~~~~~~~~~~~~~l~~g~s-~n~YM~hGGTNfG~~~ga~~~~~~~~~tSYDy~Apl~E~g~~ 315 (612)
T 3d3a_A 237 CSEFWSGWFDHWGAKHETRSAEELVKGMKEMLDRNIS-FSLYMTHGGTSFGHWGGANFPNFSPTCTSYDYDAPINESGKV 315 (612)
T ss_dssp EEEEECSCCCBTTSCCCCCCHHHHHHHHHHHHTTTCE-EEEECSBCCBCCTTCBCEETTTTEEBCSBCCTTCSBCTTSCC
T ss_pred eeccccCccccccCCCccCCHHHHHHHHHHHHHcCCc-eEeeeeecccCCCcccccCCCCccceeeeeccCCccCcCCCc
Confidence 9999999999999999999999999999999999999 599999999999999886 4 4 79999999999999999
Q ss_pred CChhHHHHHHHHHHHHHhhhcccCCCCCCCCCCCCceEEEEEcCCCceEEEEEeCCCCeeEEEEECCeEEEecCeeEEEc
Q 009890 325 RQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVYKTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSIL 404 (523)
Q Consensus 325 ~~pKy~~lk~lh~~i~~~~~~L~~~~~~~~~lg~~~~~~v~~~~~~~~~~Fl~N~~~~~~~~V~f~~~~~~lp~~svsIl 404 (523)
+|||.+||+|+.- .|..+.+.. .|..|.. .+.+|++++
T Consensus 316 -~~ky~~lr~~~~~------~~~~~~~~~--------------------~~p~~~~------------~~~~~~~~~--- 353 (612)
T 3d3a_A 316 -TPKYLEVRNLLGN------YLPEGETLP--------------------EIPDSIP------------TIAIPTIKM--- 353 (612)
T ss_dssp -CHHHHHHHHHHTT------SSCTTCCCC--------------------CCCCCCC------------BCCEEEEEC---
T ss_pred -cHHHHHHHHHHHH------hcccCCCcC--------------------CCCCCCc------------ccccccEEE---
Confidence 7999999998741 122211110 0111211 345555554
Q ss_pred CCCCeEEeecceecCcccceeeeeccccccccCCCCCCcceeEeeccCCCCCCCccccchhhhhhhccCCCceeeEEEeE
Q 009890 405 PDCKNVVFNTAKINSVTLVPSFSRQSLQVAADSSDAIGSGWSYINEPVGISKDDAFTKPGLLEQINTTADQSDYLWYSLS 484 (523)
Q Consensus 405 p~~~~v~~~Ta~v~~q~~~~~~~~~~~~~~~~~~~~~~~~W~~~~E~~~~~~~~~~~~~~llEq~~~T~D~sDYLWY~T~ 484 (523)
.+||++ |+.+.||+. ...+.++|||+.+. ||+||+|+
T Consensus 354 -------~~~~~l---------------------------~~~~~~~~~------~~~p~~~E~l~q~~---gy~lY~t~ 390 (612)
T 3d3a_A 354 -------TEMAVL---------------------------FDNLPHPKE------SEDIRTMEAFDQGW---GSILYRTS 390 (612)
T ss_dssp -------CEEEEG---------------------------GGGCCCCEE------ESSCCBGGGGTCCS---SEEEEEEE
T ss_pred -------eeeeeH---------------------------HHhCCCccc------CCCCCCHHHhCCCC---CeEEEEEE
Confidence 244433 222224332 12367799999987 49999999
Q ss_pred EEecCCCccccCCCeeEEEEeecCcEEEEEEcCeeeec
Q 009890 485 TNIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVGE 522 (523)
Q Consensus 485 v~i~~~~~~~~~~~~~~L~v~s~gh~lh~FVNg~~~G~ 522 (523)
|..+ +..++|+|.+.+|.+||||||+++|+
T Consensus 391 i~~~--------~~~~~L~i~~~~D~a~Vfvng~~~G~ 420 (612)
T 3d3a_A 391 LSAS--------DKEQTLLITEAHDWAQVFLNGKKLAT 420 (612)
T ss_dssp ECCB--------SSCEEEEEEEEESEEEEEETTEEEEE
T ss_pred ecCC--------CCCceEEecCCCeEEEEEECCEEEEE
Confidence 9753 24569999999999999999999996
|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-37 Score=329.84 Aligned_cols=171 Identities=18% Similarity=0.297 Sum_probs=145.3
Q ss_pred eeEEEecceEEECCEEEEEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHH
Q 009890 25 ANVTYDHRAVVIGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLV 104 (523)
Q Consensus 25 ~~vt~d~~~l~idGk~~~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la 104 (523)
.+|+.++.+|++||||++++||++|+++..+..+++.+++||++|+|+|++||+|+.|||+||+|||+ .|++||++|
T Consensus 42 ~~i~~~~~~f~lnGkPf~i~gg~~H~~~~y~r~~~~~W~~mKa~G~NtVr~~V~W~~hEP~~G~yDF~---~LD~~ldla 118 (552)
T 3u7v_A 42 LVTKDGRHALMVDGAPFLMLAAQVNNSSAWPSQMAKVWPAIEKVGANTVQVPIAWEQIEPVEGQFDFS---YLDLLLEQA 118 (552)
T ss_dssp EEEETTEEEEEETTEEECEEEEECCTTCCSGGGHHHHHHHHHHHTCSEEEEEEEHHHHCSBTTBCCCH---HHHHHHHHH
T ss_pred EEEECCeEEEEECCEEEEEEEEEeCCCCCchhhhHHHHHHHHHhCCCEEEEEehhhccCCCCCccChh---hHHHHHHHH
Confidence 44666677789999999999999996665556666666699999999999999999999999999999 599999999
Q ss_pred HHcCCEEEEecCceeccccCCCC---CCccccCCCCe--eeecCC-----------hhHHHHHHHHHHHHHHHHHhcccc
Q 009890 105 AEAGLYAHLRIGPYVCAEWNFGG---FPLWLHFIPGI--QFRTDN-----------EPFKAEMQRFTAKIVDMMKQEKLY 168 (523)
Q Consensus 105 ~~~GL~Vilr~GPyi~aEw~~GG---~P~WL~~~p~i--~~Rt~d-----------~~fl~~~~~~~~~i~~~ik~~~l~ 168 (523)
+++||+|||| ||+||++|| +|.||.++|++ ++|+.| |.|++++++|+++|+++|+++ +
T Consensus 119 ~e~GL~VIL~----i~aeW~~ggta~~P~WL~~d~~~~P~vrt~dG~~~~~~sp~~p~yl~a~r~~~~~l~~~La~r--~ 192 (552)
T 3u7v_A 119 RERKVRLVLL----WFGTWKNSSPSYAPEWVKLDDKRFPRLIKDDGERSYSMSPLAKSTLDADRKAFVALMTHLKAK--D 192 (552)
T ss_dssp HHTTCEEEEE----EEEEEETTBCTTSCHHHHTCTTTSCEEECTTSCEEEEECTTCHHHHHHHHHHHHHHHHHHHHH--H
T ss_pred HHCCCEEEEE----eccccccCCCcCCCchhhcCcccCceeECCCCcEeecCCCCcHHHHHHHHHHHHHHHHHHHHH--h
Confidence 9999999999 899999999 99999976654 568887 999999999999999999955 3
Q ss_pred cccCCceEecccccccccccc--ccC-cccHHHHHHHHHH
Q 009890 169 ASQGGPIILSQIENEYGNIDS--AYG-AAGKSYIKWAAGM 205 (523)
Q Consensus 169 ~~~gGpII~~QIENEyg~~~~--~~g-~~~~~y~~~l~~~ 205 (523)
.++|||||||||||||++.. .|. .+.+.|.+||++.
T Consensus 193 -~~~p~VI~wQIeNEyG~~g~~~~Y~~~~~~aFR~WL~~r 231 (552)
T 3u7v_A 193 -AAQKTVIMVQVENETGTYGSVRDFGPAAQKVFNGPAPAT 231 (552)
T ss_dssp -TTTCCEEEEEEEESCSBSSCSSCCSHHHHHHHHSBCCHH
T ss_pred -CCCCcEEEEEecccCCCCCCcchhhHHHHHHHHHHhhhc
Confidence 48999999999999997632 122 3455666666554
|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.3e-24 Score=237.60 Aligned_cols=287 Identities=15% Similarity=0.218 Sum_probs=199.6
Q ss_pred EEEEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEcc-ccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCce
Q 009890 40 RRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYV-FWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPY 118 (523)
Q Consensus 40 ~~~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYv-fWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPy 118 (523)
+.++++|++|+.+++++.|+++|++||++|+|+|++++ .|+.+||+||+|||+ +|+++|++|+++||+|||+++++
T Consensus 7 ~~~~~G~~y~pe~w~~~~~~~Dl~~mk~~G~n~vr~~if~W~~~eP~~g~~~f~---~ld~~i~~~~~~Gi~vil~~~~~ 83 (675)
T 3tty_A 7 PKIWYGGDYNPEQWDKATMEEDMRMFNLAGIDVATVNVFSWAKIQRDEVSYDFT---WLDDIIERLTKENIYLCLATSTG 83 (675)
T ss_dssp CSCEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEECSSCHHHHBSSSSCBCCH---HHHHHHHHHHHTTCEEEEECCTT
T ss_pred CCceEeeeCChhhCCHHHHHHHHHHHHHcCCCEEEEeeechhhhCCcCCccCHH---HHHHHHHHHHHCCCEEEEeCCCC
Confidence 46889999999999999999999999999999999997 799999999999998 99999999999999999999876
Q ss_pred eccccCCCCCCccccCCC-Ce--------eeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccccc
Q 009890 119 VCAEWNFGGFPLWLHFIP-GI--------QFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDS 189 (523)
Q Consensus 119 i~aEw~~GG~P~WL~~~p-~i--------~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~ 189 (523)
.+-+|-....|.||...+ |. ....++|.|++++++++++|++++++ .++||+|||+||||+. +
T Consensus 84 ~~P~Wl~~~~Pe~l~~d~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~-------~p~Vi~w~v~NE~g~~-~ 155 (675)
T 3tty_A 84 AHPAWMAKKYPDVLRVDYEGRKRKFGGRHNSCPNSPTYRKYAKILAGKLAERYKD-------HPQIVMWHVSNEYGGY-C 155 (675)
T ss_dssp SCCHHHHHHCGGGBCBCTTSCBCCSCSSSCBCTTCHHHHHHHHHHHHHHHHHTTT-------CTTEEEEECSSSCCCC-C
T ss_pred CCChhhhhcCCceeeecCCCcCcccCCccCCCCCCHHHHHHHHHHHHHHHHHhCC-------CCcEEEEEEccccCCC-c
Confidence 555554444455543221 11 13367899999999999999998874 4689999999999964 2
Q ss_pred ccCcccHHHHHHHHHHHHh-------cC-------------CCcceEEc---------cC----------C---------
Q 009890 190 AYGAAGKSYIKWAAGMALS-------LD-------------TGVPWVMC---------QQ----------S--------- 221 (523)
Q Consensus 190 ~~g~~~~~y~~~l~~~~~~-------~g-------------~~vP~~~~---------~~----------~--------- 221 (523)
.+..+.+.|.+||++++.. -| +..|-.+. .. .
T Consensus 156 y~~~~~~~Fr~wLk~kY~ti~~LN~aWgt~fWs~~y~~w~ei~~P~~~~~~~~~~~~~~p~~~lD~~rF~~~~~~~~~~~ 235 (675)
T 3tty_A 156 YCDNCEKQFRVWLKERYGTLEALNKAWNTSFWSHTFYDWDEIVAPNALSEEWSGNRTNFQGISLDYRRFQSDSLLECFKM 235 (675)
T ss_dssp CSHHHHHHHHHHHHHHHSSHHHHHHHTTTTGGGCCCSSGGGCCCCSTTTTEETTTEESCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcCHHHHHHHhCcccccCccCCHHHhcCCccccccccccccCChHHHHHHHHHHHHHHHHHHHH
Confidence 2345678899999987742 11 12221111 00 0
Q ss_pred -------CCCC-ccc-cC---CCCcc-------c-----CCCC-----------------CCCCCCCceEeeeccccccc
Q 009890 222 -------DAPD-PII-NT---CNGFY-------C-----DQFT-----------------PNSNNKPKMWTENWSGWFLS 260 (523)
Q Consensus 222 -------~~p~-~vi-~~---~ng~~-------~-----~~~~-----------------~~~~~~P~~~tE~~~Gwf~~ 260 (523)
..|+ +|. |. ..+.+ + |.+- .....+|.+.+|..+| ...
T Consensus 236 ~~d~iR~~~P~~pvt~N~~~~~~~~D~~~~a~~~Dvvs~D~Yp~~~~~~~~~a~~~dl~R~~~~g~p~~~mE~~~~-~~~ 314 (675)
T 3tty_A 236 ERDELKRWTPDIPVTTNLMGFYPELDYFKWAKEMDVVSWDNYPSMDTPFSFTAMAHNLMRGLKSGQPFMLMEQTPG-VQN 314 (675)
T ss_dssp HHHHHHHHCTTSCEECEECTTCTTSCHHHHHTTCSSCEEECCCCTTSCHHHHHHHHHHHHHTTTTCCEEEEECCSS-CCT
T ss_pred HHHHHHHhCCCCCEEEccccccCCcCHHHHhhcCCEEEECCCCCcCCCHHHHHHHHHHHHhhcCCCCeEEecCCCC-CCC
Confidence 0111 110 00 00110 0 1110 1233589999999887 346
Q ss_pred cCCCCCCCCHHHHHHHHHHHHhcCCeeeeeeeeccCCCCCCCCCCCcccccccCCCCCCcCCCCCChhHHHHHHHHHHHH
Q 009890 261 FGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIK 340 (523)
Q Consensus 261 wG~~~~~r~~~d~~~~~~~~~~~g~s~~nyYM~hGGTNfG~~~G~~~~~TSYDy~Api~E~G~~~~pKy~~lk~lh~~i~ 340 (523)
|..-.+...+..+.......++.|+..+.|+-++...+ | .-.| -.|.|+-+|...++.|.+++++.+.|+
T Consensus 315 w~~~~~~~~pg~~r~~~~~~~A~Ga~~v~~f~wr~~~~-g--------~E~~-h~g~~~~~g~~~~r~~~ev~~~~~~l~ 384 (675)
T 3tty_A 315 WQPYNSAKRPGVMRLWSYQAVAHGADTVMFFQLRRSVG-A--------CEKY-HGAVIEHVGHEHTRVFRECAELGKELQ 384 (675)
T ss_dssp TSSBCCCCCTTHHHHHHHHHHHTTEEEEEESCSBCCCS-G--------GGTT-SCCSBCTTCSSCSHHHHHHHHHHHHHH
T ss_pred CcCCCCCCCccHHHHHHHHHHhcccCeEeeeeccCCCC-c--------hhhh-hccccCCCCCCCchHHHHHHHHHHHHH
Confidence 76544444455665555567899999999988765321 1 1111 346788888876778999999999999
Q ss_pred HhhhcccC
Q 009890 341 LCEAALVA 348 (523)
Q Consensus 341 ~~~~~L~~ 348 (523)
..++.+..
T Consensus 385 ~l~~~~~~ 392 (675)
T 3tty_A 385 QLGDTILD 392 (675)
T ss_dssp HHTTTTTT
T ss_pred HhhhhhcC
Confidence 88655543
|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.1e-23 Score=229.58 Aligned_cols=271 Identities=14% Similarity=0.168 Sum_probs=194.0
Q ss_pred EEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEcc-ccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceecc
Q 009890 43 LISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYV-FWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCA 121 (523)
Q Consensus 43 l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYv-fWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~a 121 (523)
++++++|+.+++++.|+++|++||++|+|+|++++ .|+.+||+||+|||+ .|+++|++|+++||+||+++.
T Consensus 1 ~~G~~y~pe~w~~~~~~~dl~~mk~~G~N~vR~~if~W~~~eP~~g~~d~~---~ld~~ld~a~~~Gi~vil~~~----- 72 (645)
T 1kwg_A 1 MLGVCYYPEHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEWG---WLDEAIATLAAEGLKVVLGTP----- 72 (645)
T ss_dssp CEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTTBCCCH---HHHHHHHHHHTTTCEEEEECS-----
T ss_pred CCCCcCCcccCCHHHHHHHHHHHHHcCCCEEEEeeechhhcCCCCCccChH---HHHHHHHHHHHCCCEEEEeCC-----
Confidence 36889999999999999999999999999999996 699999999999998 899999999999999999874
Q ss_pred ccCCCCCCccccC-CCCee----------------eecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccc
Q 009890 122 EWNFGGFPLWLHF-IPGIQ----------------FRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEY 184 (523)
Q Consensus 122 Ew~~GG~P~WL~~-~p~i~----------------~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEy 184 (523)
.+++|.|+.. .|... ...++|.|++++++++++|+++++++ ++||+|||+||+
T Consensus 73 ---~~~~P~Wl~~~~P~~~~~~~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~~-------p~V~~w~i~NE~ 142 (645)
T 1kwg_A 73 ---TATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGGL-------EAVAGFQTDNEY 142 (645)
T ss_dssp ---TTSCCHHHHHHCGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTC-------TTEEEEECSSST
T ss_pred ---CCCCChhHhhcCCceeeeCCCCcCcccCccccCCCCCHHHHHHHHHHHHHHHHHhCCC-------CcEEEEEecCcC
Confidence 4566777643 33211 11468899999999999999998854 589999999999
Q ss_pred cccc--cccC-cc--------------------------------------------------------------cHHHH
Q 009890 185 GNID--SAYG-AA--------------------------------------------------------------GKSYI 199 (523)
Q Consensus 185 g~~~--~~~g-~~--------------------------------------------------------------~~~y~ 199 (523)
+... ..|+ .+ ..+|+
T Consensus 143 ~~~~~~~~y~~~~~~~f~~wL~~~y~~i~~ln~awgt~fws~~~~~w~~i~~P~~~~~~~~~~~~~d~~~F~~~~~~~~~ 222 (645)
T 1kwg_A 143 GCHDTVRCYCPRCQEAFRGWLEARYGTIEALNEAWGTAFWSQRYRSFAEVELPHLTVAEPNPSHLLDYYRFASDQVRAFN 222 (645)
T ss_dssp TTTTTSCCCSHHHHHHHHHHHHHHHSSHHHHHHHHTTTGGGCCCSSGGGCCCSCSCSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHhcCHHHHHHHhCccccccccCcHhhcCCCCccCCCCChHHHHHHHHHHHHHHHHHH
Confidence 8521 0111 11 23456
Q ss_pred HHHHHHHHhcCCCcceEEccCCCC-C-C-----ccccC--CC----CcccC-----C----CC-CCC-------------
Q 009890 200 KWAAGMALSLDTGVPWVMCQQSDA-P-D-----PIINT--CN----GFYCD-----Q----FT-PNS------------- 243 (523)
Q Consensus 200 ~~l~~~~~~~g~~vP~~~~~~~~~-p-~-----~vi~~--~n----g~~~~-----~----~~-~~~------------- 243 (523)
+++++.+++.+.++|++++..... + + +.++. ++ ++.+. . |. ...
T Consensus 223 ~~~~~~ir~~~p~~pvt~n~~~~~~~~d~~~~a~~lDv~~~d~Y~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~dl~r~ 302 (645)
T 1kwg_A 223 RLQVEILRAHAPGKFVTHNFMGFFTDLDAFALAQDLDFASWDSYPLGFTDLMPLPPEEKLRYARTGHPDVAAFHHDLYRG 302 (645)
T ss_dssp HHHHHHHHHHSTTCEEECEECTTCCSSCHHHHGGGSSSEEEEECHHHHHHHSCCCHHHHHHTTTTCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcEEEeECcCCCCcCHHHHHhcCcEEEECCCCccccccccccccccccccccCchhHHHHHHHHHHh
Confidence 666777777888888776642110 0 0 00110 00 00010 0 00 011
Q ss_pred -CCCCceEeeeccccccccCCCCCCCCHHHHHHHHHHHHhcCCeeeeeeeeccCCCCCCCCCCCcccccccCCCCCCcCC
Q 009890 244 -NNKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYG 322 (523)
Q Consensus 244 -~~~P~~~tE~~~Gwf~~wG~~~~~r~~~d~~~~~~~~~~~g~s~~nyYM~hGGTNfG~~~G~~~~~TSYDy~Api~E~G 322 (523)
..+|.+.+|+..|... |+...+...+..+.......++.|+..++|+-+.. .++...+|+++ +|+++|
T Consensus 303 ~~~kP~~i~E~~~~~~~-w~~~~~~~~pg~~r~~~~~~~a~Ga~~~~~f~w~~---------~~~~~E~~~~g-~l~~~g 371 (645)
T 1kwg_A 303 VGRGRFWVMEQQPGPVN-WAPHNPSPAPGMVRLWTWEALAHGAEVVSYFRWRQ---------APFAQEQMHAG-LHRPDS 371 (645)
T ss_dssp HTTTCEEEEEECCSCCS-SSSSCCCCCTTHHHHHHHHHHHTTCSCEEEECSBC---------CSSSTTTTSCC-SBCTTS
T ss_pred hcCCCEEEecCCCCCCC-CccCCCCCCccHHHHHHHHHHhcCCCEEEEeeecc---------CCCCccccccc-ccCCCC
Confidence 1499999999988654 88654444444444444566788988877754433 34445788888 899999
Q ss_pred CCCChhHHHHHHHHHHHHHhh
Q 009890 323 LIRQPKWGHLKDLHKAIKLCE 343 (523)
Q Consensus 323 ~~~~pKy~~lk~lh~~i~~~~ 343 (523)
.. +++|.+++++...|+..+
T Consensus 372 ~~-~~~~~e~~~~~~~l~~~~ 391 (645)
T 1kwg_A 372 AP-DQGFFEAKRVAEELAALA 391 (645)
T ss_dssp CB-CHHHHHHHHHHHHHHTCC
T ss_pred Cc-CHHHHHHHHHHHHHHhhc
Confidence 98 699999999999999765
|
| >1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A | Back alignment and structure |
|---|
Probab=99.85 E-value=5.6e-22 Score=215.48 Aligned_cols=142 Identities=13% Similarity=0.171 Sum_probs=110.3
Q ss_pred EEEEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCce
Q 009890 40 RRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPY 118 (523)
Q Consensus 40 ~~~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPy 118 (523)
.++.+.++.|....+++.|+++|++||++|+|+|++||.|+.|||+ ||+|||+ .+++||++|+++||+||+++++|
T Consensus 13 ~~vmlp~~~v~~~~~~~~w~~dl~~mk~~Gln~Vr~~V~W~~iEP~g~G~ydf~---~~d~~id~a~~~GL~viv~L~~h 89 (516)
T 1vem_A 13 AYLMAPLKKIPEVTNWETFENDLRWAKQNGFYAITVDFWWGDMEKNGDQQFDFS---YAQRFAQSVKNAGMKMIPIISTH 89 (516)
T ss_dssp EEEECCSSCGGGTSCHHHHHHHHHHHHHTTEEEEEEEEEHHHHTCSSTTCCCCH---HHHHHHHHHHHTTCEEEEEEECS
T ss_pred eEEEecccccCCCCCHHHHHHHHHHHHHcCCCEEEEecchhhccCCCCCccchH---HHHHHHHHHHHCCCEEEEEeccc
Confidence 4455666777777799999999999999999999999999999999 9999999 68999999999999999999999
Q ss_pred eccc----cCCCCCCccccCC-C--CeeeecCC----hhHH-----HHHHHHHHHHHHHHHhcccccccCCceEe-----
Q 009890 119 VCAE----WNFGGFPLWLHFI-P--GIQFRTDN----EPFK-----AEMQRFTAKIVDMMKQEKLYASQGGPIIL----- 177 (523)
Q Consensus 119 i~aE----w~~GG~P~WL~~~-p--~i~~Rt~d----~~fl-----~~~~~~~~~i~~~ik~~~l~~~~gGpII~----- 177 (523)
+|+| |.++++|.||.+. | ++.+++.+ +.++ ......+.++++.++++ + .+.++||+
T Consensus 90 ~c~g~~g~~~~~~lP~WL~~~~p~~di~~~d~~G~~~~~~~~~~~~~~~~~~y~~~~~~la~r--~-~~~~~vI~eI~vg 166 (516)
T 1vem_A 90 QCGGNVGDDCNVPIPSWVWNQKSDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFAAA--M-KPYKDVIAKIYLS 166 (516)
T ss_dssp CBSSSTTCCCCBCCCGGGGGGCSSSCSSEECTTCCEECSSCCTTCHHHHHHHHHHHHHHHHHH--T-GGGGGGBCCEEEC
T ss_pred ccCCCcCCCCCCCCCHHHHhcCCccceeeECCCCCCCcccccccccCccHHHHHHHHHHHHHH--H-ccCCCEEEEeecc
Confidence 9985 9999999999874 5 56555422 1111 11222223355555532 2 23348999
Q ss_pred -----------cccccccccc
Q 009890 178 -----------SQIENEYGNI 187 (523)
Q Consensus 178 -----------~QIENEyg~~ 187 (523)
+|||||||..
T Consensus 167 lG~~GelryPs~qv~NE~g~~ 187 (516)
T 1vem_A 167 GGPAGELRYPSYTTSDGTGYP 187 (516)
T ss_dssp CSGGGBSSCCCCCTTTTCCTT
T ss_pred ccccccccccccccccCcCCC
Confidence 9999999875
|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=5.1e-21 Score=201.03 Aligned_cols=185 Identities=16% Similarity=0.261 Sum_probs=130.6
Q ss_pred EecceEEECCEEEEEEEEEeeCCCC-CccchHHHHHHHHhCCCCEEEEcccc----------CcCCCCCceee-------
Q 009890 29 YDHRAVVIGGKRRVLISGSIHYPRS-TPEMWPDLIQKSKDGGLDVIETYVFW----------NLHEPVRNQYN------- 90 (523)
Q Consensus 29 ~d~~~l~idGk~~~l~sG~iHy~R~-~~~~W~d~l~k~Ka~GlN~V~tYvfW----------n~HEp~~G~yd------- 90 (523)
.++..|.+||||+.+.+..+||.+. ++++|++.|++||++|+|+||+++|| ..+||.||+||
T Consensus 15 ~~g~~F~ldGkp~~f~G~N~y~~~~~~~~~i~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~G~yd~~~~~~~ 94 (383)
T 3pzg_A 15 VPRGSHMLNGKEFRFIGSNNYYMHYKSNRMIDSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISN 94 (383)
T ss_dssp ------------CCEEEEECSCTTTSCHHHHHHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBTTBCSSCTTCSS
T ss_pred ccCCEEEECCEEEEEEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccCCCcccccccccc
Confidence 3567899999999999999999887 67789999999999999999999995 46899999999
Q ss_pred -ccCcchHHHHHHHHHHcCCEEEEecCceecccc-CCCCCCccccCCCC--eeeecCChhHHHHHHHHHHHHHHHHHhc-
Q 009890 91 -FEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEW-NFGGFPLWLHFIPG--IQFRTDNEPFKAEMQRFTAKIVDMMKQE- 165 (523)
Q Consensus 91 -F~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw-~~GG~P~WL~~~p~--i~~Rt~d~~fl~~~~~~~~~i~~~ik~~- 165 (523)
.++...|+++|++|+++||+|||.+ +.+| .+||.|.|+....+ .....+||.++++.++++++|++++...
T Consensus 95 ~~~~~~~LD~~i~~A~k~GI~viL~l----~~~w~~~GG~~~y~~~~g~~~~~~f~~dp~~~~~~~~~~~~l~~r~N~~t 170 (383)
T 3pzg_A 95 AQNGFERLDYTIAKAKELGIKLIIVL----VNNWDDFGGMNQYVRWFGGTHHDDFYRDERIKEEYKKYVSFLINHVNVYT 170 (383)
T ss_dssp CEEHHHHHHHHHHHHHHHTCEEEEEC----CBSSSTTSHHHHHHHHTTCCSTTHHHHCHHHHHHHHHHHHHHHTCBCTTT
T ss_pred hHHHHHHHHHHHHHHHHCCCEEEEEc----cccccccCCccchhhhcCCCccccccCCHHHHHHHHHHHHHHHhhhcccc
Confidence 5556699999999999999999998 4677 47888866543221 1122357889999999999998884321
Q ss_pred ccccccCCceEeccccccccccccccCcccHHHHHHHHHHHHhcCCCcceEE
Q 009890 166 KLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVM 217 (523)
Q Consensus 166 ~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~ 217 (523)
++.+++.++|++|||.||+++....-++.-.+|++.+.+.+|+.+-..|++.
T Consensus 171 G~~y~~~p~I~~w~l~NEp~~~~~~~~~~~~~w~~~~~~~IR~~Dp~~lVt~ 222 (383)
T 3pzg_A 171 GVPYREEPTIMAWELANELRCETDKSGNTLVEWVKEMSSYIKSLDPNHLVAV 222 (383)
T ss_dssp CCBGGGCTTEEEEESCBTCCCTTCTTSHHHHHHHHHHHHHHHHHCSSSEEEC
T ss_pred CcccCCCCcEEEEEecCCCCcccCccHHHHHHHHHHHHHHHHhhCCCceEEE
Confidence 2335667799999999999875321112223445555556667777777654
|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.75 E-value=4.8e-18 Score=175.17 Aligned_cols=188 Identities=16% Similarity=0.159 Sum_probs=139.3
Q ss_pred eeEEEecceEEECCEEEEEEEEEeeCCC------CCccchHHHHHHHHhCCCCEEEEccc----cCcCCCCCceeeccCc
Q 009890 25 ANVTYDHRAVVIGGKRRVLISGSIHYPR------STPEMWPDLIQKSKDGGLDVIETYVF----WNLHEPVRNQYNFEGR 94 (523)
Q Consensus 25 ~~vt~d~~~l~idGk~~~l~sG~iHy~R------~~~~~W~d~l~k~Ka~GlN~V~tYvf----Wn~HEp~~G~ydF~G~ 94 (523)
..|+.++..|++||||+++.+...|+.. .+++.|+++|+.||++|+|+||++++ |..+||.||+||.+..
T Consensus 5 g~v~v~g~~~~~nG~p~~~~G~n~~~~~~~~~~~~~~~~~~~dl~~~k~~G~N~vR~~~~~~~~w~~~~~~~g~~~~~~~ 84 (373)
T 1rh9_A 5 NFVYTDGTHFALNGKSLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMF 84 (373)
T ss_dssp CCCEEETTEEEETTEEECEEEEECTTHHHHHHSTTTTHHHHHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHH
T ss_pred CcEEEeCCEEEECCEEEEEEEEccccccccccCCccHHHHHHHHHHHHHCCCCEEEECeecCCCCccccCCCCccCHHHH
Confidence 4578899999999999999999998752 46889999999999999999999987 8899999999996666
Q ss_pred chHHHHHHHHHHcCCEEEEecCceeccccC-CCC---CCccccCCCCeee-----ecCChhHHHHHHHHHHHHHHHHHhc
Q 009890 95 YDLVKFVKLVAEAGLYAHLRIGPYVCAEWN-FGG---FPLWLHFIPGIQF-----RTDNEPFKAEMQRFTAKIVDMMKQE 165 (523)
Q Consensus 95 ~dL~~fl~la~~~GL~Vilr~GPyi~aEw~-~GG---~P~WL~~~p~i~~-----Rt~d~~fl~~~~~~~~~i~~~ik~~ 165 (523)
..|+++|++|+++||+||+.+ +..|. .|| .|.|+.. ++..+ -.+||.++++..+++++|++++...
T Consensus 85 ~~ld~~i~~a~~~Gi~vil~l----~~~~~~~gg~~~~~~w~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~n~~ 159 (373)
T 1rh9_A 85 QGLDFVISEAKKYGIHLIMSL----VNNWDAFGGKKQYVEWAVQ-RGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTI 159 (373)
T ss_dssp HHHHHHHHHHHHTTCEEEEEC----CBSSSSSSBHHHHHHHHHH-TTCCCCCGGGGGTCHHHHHHHHHHHHHHHHCBCTT
T ss_pred HHHHHHHHHHHHCCCEEEEEe----cccccccCChHHHHHHHhh-cCCCCCchhhcccCHHHHHHHHHHHHHHHhccCcc
Confidence 699999999999999999975 33443 466 4667642 22111 1347888888889999988881100
Q ss_pred -ccccccCCceEeccccccccccccccCcccHHHHHHHHHHHHhcCCCcceEE
Q 009890 166 -KLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVM 217 (523)
Q Consensus 166 -~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~ 217 (523)
+..+++.+.||+|||.||++......+..-.++++.+.+.+|+.+-..|+++
T Consensus 160 tg~~y~~~p~v~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~dp~~~v~~ 212 (373)
T 1rh9_A 160 TKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEI 212 (373)
T ss_dssp TCSBGGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHHHHCCSSEEEC
T ss_pred CCccccCCCcEEEEeeccCcCccCCCCHHHHHHHHHHHHHHHHhhCCCceEEe
Confidence 1112344589999999999864221112234456666667777787777654
|
| >1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 | Back alignment and structure |
|---|
Probab=99.69 E-value=8e-16 Score=178.93 Aligned_cols=262 Identities=16% Similarity=0.177 Sum_probs=176.0
Q ss_pred eeEEEecceEEECCEEEEEEEEEeeCC------CCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHH
Q 009890 25 ANVTYDHRAVVIGGKRRVLISGSIHYP------RSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLV 98 (523)
Q Consensus 25 ~~vt~d~~~l~idGk~~~l~sG~iHy~------R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~ 98 (523)
.+|++++..|+|||||+++.++..|.. ..+++.|+++|++||++|+|+||++ |.|.. .
T Consensus 312 R~ve~~~~~f~lNGkpi~l~Gvn~h~~~p~~G~~~~~e~~~~dl~lmK~~G~N~VR~~-----hyp~~-----------~ 375 (1024)
T 1yq2_A 312 RTVRIVGDQFLVNGRRVVFHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTS-----HYPPH-----------P 375 (1024)
T ss_dssp CCEEEETTEEEETTEECCEEEEEECCCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEET-----TSCCC-----------H
T ss_pred EEEEEeCCEEEECCceEEEEEEEccCCccccccCCCHHHHHHHHHHHHHcCCCEEEec-----CCCCC-----------H
Confidence 468899999999999999999999853 2588999999999999999999995 55532 7
Q ss_pred HHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEec
Q 009890 99 KFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILS 178 (523)
Q Consensus 99 ~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~ 178 (523)
+|+++|.++||+|+..+ |..|.- .+++.|.. ...++|.|+++..+.+++++++.+.| ++||+|
T Consensus 376 ~fydlcDe~Gi~V~~E~-~~~~~g---~~~~~w~~------~~~~~p~~~~~~~~~~~~mV~r~rNH-------PSIi~W 438 (1024)
T 1yq2_A 376 RLLDLADEMGFWVILEC-DLETHG---FEAGGWVE------NPSDVPAWRDALVDRMERTVERDKNH-------PSIVMW 438 (1024)
T ss_dssp HHHHHHHHHTCEEEEEC-SCBCGG---GTTTTTTT------CGGGCGGGHHHHHHHHHHHHHHHTTC-------TTEEEE
T ss_pred HHHHHHHHCCCEEEEcC-CcccCC---cccccccc------cCCCCHHHHHHHHHHHHHHHHHcCCC-------CeEEEE
Confidence 99999999999999987 432210 11344532 23478899998888888888888755 599999
Q ss_pred cccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEccCCCCC-CccccC--CCCcccCCCC-----C---------
Q 009890 179 QIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAP-DPIINT--CNGFYCDQFT-----P--------- 241 (523)
Q Consensus 179 QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~~~~~p-~~vi~~--~ng~~~~~~~-----~--------- 241 (523)
++.||.+. + .+++.+.+.+++++...|+......... ..|+.. .....|+.+. +
T Consensus 439 slgNE~~~-----g----~~~~~l~~~ik~~DptRpv~~~~~~~~~~~Dv~s~~Y~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (1024)
T 1yq2_A 439 SLGNESGT-----G----SNLAAMAAWAHARDSSRPVHYEGDYTGAYTDVYSRMYSSIPETDSIGRNDSHALLLGCDSAE 509 (1024)
T ss_dssp ECCSSCCC-----C----HHHHHHHHHHHHHCTTSCEECTTCTTCSSCSSEEEESCCHHHHHHHHCSSCCCCCTTCCHHH
T ss_pred ECCcCcch-----H----HHHHHHHHHHHHhCCCceEEeCCcccCCccceeccCCCCHHHHHHHHhcccccccccccchh
Confidence 99999864 2 4688899999999999887654322111 111110 0000111111 1
Q ss_pred --CCCCCCceEeeeccccccccCCCCCCCCHHHHHHHHHHH-HhcCCee-----e---------eeeeeccCCCCCCCCC
Q 009890 242 --NSNNKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARF-FQRGGTF-----Q---------NYYMYHGGTNFDRTSG 304 (523)
Q Consensus 242 --~~~~~P~~~tE~~~Gwf~~wG~~~~~r~~~d~~~~~~~~-~~~g~s~-----~---------nyYM~hGGTNfG~~~G 304 (523)
..+++|.+.+|+..+....+|+ .++.-..+.+. ...|+-. + .-||.+|| +||...
T Consensus 510 ~~~~~~kP~i~~Eygha~gn~~g~------~~~y~~~~~~~~~~~G~fiW~~~D~~~~~~~~~g~~~~~yGG-dfg~~p- 581 (1024)
T 1yq2_A 510 SARQRTKPFILCEYVHAMGNGPGA------MDQYEALVDKYPRLHGGFVWEWRDHGIRTRTAEGMEFFAYGG-DFGEVV- 581 (1024)
T ss_dssp HHHHTTSCEEEEEESCCCSSCCCC------HHHHHHHHHHCTTEEEEEESCSBCCCEEEECTTCCEEEECTT-TTCCSS-
T ss_pred hccCCCCceEEEeeccccCCCccC------HHHHHHHHHhCCcceEEEEeecccccceeECCCCCEEEeecC-ccCCCC-
Confidence 3457999999997655443332 23322211110 0012111 0 23555666 787542
Q ss_pred CCcccccccCCCCCCcCCCCCChhHHHHHHHHHHHH
Q 009890 305 GPFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIK 340 (523)
Q Consensus 305 ~~~~~TSYDy~Api~E~G~~~~pKy~~lk~lh~~i~ 340 (523)
.-..|.++..++++|.+ .|+|..+|.+...++
T Consensus 582 ---~d~~f~~~Glv~~dR~p-k~~~~e~k~~~~~i~ 613 (1024)
T 1yq2_A 582 ---HDSNFVMDGMVLSDSTP-TPGLYEFKQIVSPIR 613 (1024)
T ss_dssp ---CCGGGGCCCSBCTTSCB-CHHHHHHHHHTCSEE
T ss_pred ---CCCccccCCccCcCccc-CHHHHHHHHhhccee
Confidence 11247789999999998 599999998877764
|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.9e-16 Score=168.10 Aligned_cols=189 Identities=16% Similarity=0.138 Sum_probs=134.3
Q ss_pred eeEEEecceEEECCEEEEEEEEEeeCCC--------CCccchHHHHHHHHhCCCCEEEEc-------c---ccCcCCCCC
Q 009890 25 ANVTYDHRAVVIGGKRRVLISGSIHYPR--------STPEMWPDLIQKSKDGGLDVIETY-------V---FWNLHEPVR 86 (523)
Q Consensus 25 ~~vt~d~~~l~idGk~~~l~sG~iHy~R--------~~~~~W~d~l~k~Ka~GlN~V~tY-------v---fWn~HEp~~ 86 (523)
..|+.++..|++||||+++.+...|+.. .+++.|+++|+.||++|+|+||+. + .|...+|.|
T Consensus 23 gfv~v~g~~f~~nG~p~~~~G~N~~~~~~~~~~~~~~~~~~~~~dl~~~k~~G~N~vR~~~~d~~~~~~~~~~~~~~~~~ 102 (440)
T 1uuq_A 23 HFVRVNGGHFELQGKPYVITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGF 102 (440)
T ss_dssp CCCEEETTEEEETTEEECEEEEECTTHHHHTCSSTTCCHHHHHHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSST
T ss_pred CCEEeeCCEEEECCeEEEEEeEccCchhhhccCcccCCHHHHHHHHHHHHHcCCCEEEECcccCCCCCcccccccccCCC
Confidence 4488999999999999999999987522 267889999999999999999998 2 377889999
Q ss_pred ceeeccCcchHHHHHHHHHHcCCEEEEecCceecccc-CCCCCC---ccccCCCC-e--------------eeecCChhH
Q 009890 87 NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEW-NFGGFP---LWLHFIPG-I--------------QFRTDNEPF 147 (523)
Q Consensus 87 G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw-~~GG~P---~WL~~~p~-i--------------~~Rt~d~~f 147 (523)
|+||-++...|+++|++|+++||+|||-+- ..| ..||+| .|...... + ..-.+||.+
T Consensus 103 g~~~e~~~~~lD~~l~~a~~~Gi~vil~l~----~~~~~~Gg~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 178 (440)
T 1uuq_A 103 GNYDETLLQGLDYLLVELAKRDMTVVLYFN----NFWQWSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKA 178 (440)
T ss_dssp TCBCHHHHHHHHHHHHHHHHTTCEEEEECC----BSSSTTCHHHHHHHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHH
T ss_pred CccCHHHHHHHHHHHHHHHHCCCEEEEEcc----ccccccCCchhhHHHhccCCCCCCcccccccchhhhhhhhccCHHH
Confidence 999977777999999999999999999763 334 356665 45432100 0 011356788
Q ss_pred HHHHHHHHHHHHHHHHhc-ccccccCCceEeccccccccccccccCc-ccHHHHHHHHHH---HHhcCCCcceEE
Q 009890 148 KAEMQRFTAKIVDMMKQE-KLYASQGGPIILSQIENEYGNIDSAYGA-AGKSYIKWAAGM---ALSLDTGVPWVM 217 (523)
Q Consensus 148 l~~~~~~~~~i~~~ik~~-~l~~~~gGpII~~QIENEyg~~~~~~g~-~~~~y~~~l~~~---~~~~g~~vP~~~ 217 (523)
+++.++++++|+++.-.. ++.+++...||+|+|.||.+.....++. ....+.+|++++ .++.+-..|++.
T Consensus 179 ~~~~~~~~~~l~~R~N~~tg~~ykn~P~Ii~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~Ir~~Dp~~lV~~ 253 (440)
T 1uuq_A 179 QQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWVHAAAAYIKTLDAHHLVSS 253 (440)
T ss_dssp HHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCCSCSTTCCHHHHHHHHHHHHHHHHHHHHHCSSSEEEC
T ss_pred HHHHHHHHHHHHhccCCcCCcccCCCCceEEEeeccCcccccCcccccchHHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 888888888888770000 1112344589999999999864211221 345555565555 566777776654
|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1e-15 Score=164.25 Aligned_cols=187 Identities=13% Similarity=0.156 Sum_probs=137.3
Q ss_pred CeeEEEecceEEE-CCEEEEEEEEEeeCCC-----CCccchHHHH-HHHHhCCCCEEEEccccCcCCCCCceeeccCcch
Q 009890 24 GANVTYDHRAVVI-GGKRRVLISGSIHYPR-----STPEMWPDLI-QKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYD 96 (523)
Q Consensus 24 ~~~vt~d~~~l~i-dGk~~~l~sG~iHy~R-----~~~~~W~d~l-~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~d 96 (523)
+..+..+++.|.- +|+++++.+-..+..- ..+..|+++| +.||++|+|+||+.+.|..+||.||+||+++...
T Consensus 27 ~~~~~~~g~~i~d~~G~~~~l~GvN~~~~~~~~~~g~~~~~~~di~~~l~~~G~N~VRl~v~w~~~~p~~g~~~~~~l~~ 106 (481)
T 2osx_A 27 GSGTALTPSYLKDDDGRSLILRGFNTASSAKSAPDGMPQFTEADLAREYADMGTNFVRFLISWRSVEPAPGVYDQQYLDR 106 (481)
T ss_dssp ------CCCCCBCTTCCEECCEEEEECGGGGTCTTSCCSCCHHHHHHHHHHHCCCEEEEEECHHHHCSBTTBCCHHHHHH
T ss_pred CcccccCCCeEECCCCCEEEeeeEecCCCCCCCCCCCccccHHHHHHHHHHCCCCEEEEeCcHHHcCCCCCCcCHHHHHH
Confidence 3446777766654 6899988887776521 2367899999 9999999999999999999999999999998888
Q ss_pred HHHHHHHHHHcCCEEEEec-----Cceec------cccCCC--CCCccccCCCCeeee----------------------
Q 009890 97 LVKFVKLVAEAGLYAHLRI-----GPYVC------AEWNFG--GFPLWLHFIPGIQFR---------------------- 141 (523)
Q Consensus 97 L~~fl~la~~~GL~Vilr~-----GPyi~------aEw~~G--G~P~WL~~~p~i~~R---------------------- 141 (523)
|+++|+.|+++||+|||.+ ++|++ .=|++| |.|.|+....++..+
T Consensus 107 l~~~v~~a~~~Gi~vildlH~d~~~~~~~P~~~~~ng~~~gg~g~P~W~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~f~ 186 (481)
T 2osx_A 107 VEDRVGWYAERGYKVMLDMHQDVYSGAITPEGNSGNGAGAIGNGAPAWATYMDGLPVEPQPRWELYYIQPGVMRAFDNFW 186 (481)
T ss_dssp HHHHHHHHHHTTCEEEEEECCBSSCGGGSTTTCSBTTBCSSSBSSCGGGCCCTTCCCCCCSSGGGGGGSHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCEEEEEccccccccccccccccccccccCCCCCccceeccCCCCccccccchhhccchhhHHHHHHHh
Confidence 9999999999999999985 33331 112334 489999753332111
Q ss_pred ---cCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccC-----cccHHHHHHHHHHHHhcCCCc
Q 009890 142 ---TDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYG-----AAGKSYIKWAAGMALSLDTGV 213 (523)
Q Consensus 142 ---t~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g-----~~~~~y~~~l~~~~~~~g~~v 213 (523)
.+++.++++..+++++|++++|++ +.||+|||.||..... .++ ..-..|++.+.+.+|+.+-+.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~la~ryk~~-------p~Vi~~el~NEP~~~~-~~~~~~~~~~l~~~~~~~~~aIR~~dp~~ 258 (481)
T 2osx_A 187 NTTGKHPELVEHYAKAWRAVADRFADN-------DAVVAYDLMNEPFGGS-LQGPAFEAGPLAAMYQRTTDAIRQVDQDT 258 (481)
T ss_dssp TTTSSCTHHHHHHHHHHHHHHHHHTTC-------TTEEEEECCSSCCCTT-CCTHHHHTTHHHHHHHHHHHHHTTTCSSS
T ss_pred ccccCCHHHHHHHHHHHHHHHHHhcCC-------CcEEEEEeecCCCCCC-CCCccccHHHHHHHHHHHHHHHHhhCCCc
Confidence 256788999999999999999854 4899999999997632 111 122456677788888888887
Q ss_pred ceEEc
Q 009890 214 PWVMC 218 (523)
Q Consensus 214 P~~~~ 218 (523)
+++..
T Consensus 259 ~I~v~ 263 (481)
T 2osx_A 259 WVCVA 263 (481)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 76654
|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=3e-15 Score=151.80 Aligned_cols=179 Identities=14% Similarity=0.159 Sum_probs=129.9
Q ss_pred eeEEEecceEEECCEEEEEEEEEeeCCCC--CccchHHHHHHHHhCCCCEEEEccccCc----------CCCCCc---ee
Q 009890 25 ANVTYDHRAVVIGGKRRVLISGSIHYPRS--TPEMWPDLIQKSKDGGLDVIETYVFWNL----------HEPVRN---QY 89 (523)
Q Consensus 25 ~~vt~d~~~l~idGk~~~l~sG~iHy~R~--~~~~W~d~l~k~Ka~GlN~V~tYvfWn~----------HEp~~G---~y 89 (523)
..|+.+++.|++||+|+++.+...|++.. +++.|+++|+.||++|+|+||++++|.. .++.|+ .|
T Consensus 3 ~~v~~~g~~~~~nG~~~~~~G~n~~~~~~~~~~~~~~~~l~~~k~~G~N~vR~~~~~~~~~~P~~~~~~~~~~~~~~~~~ 82 (344)
T 1qnr_A 3 SFVTISGTQFNIDGKVGYFAGTNCYWCSFLTNHADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTI 82 (344)
T ss_dssp CCCEEETTEEEETTEESCEEEEECGGGGGCCCHHHHHHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEE
T ss_pred CcEEEECCEEEECCEEEEEEEEecccccccCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCCCCCceeeeecCCCCccc
Confidence 45788899999999999999999887654 6888999999999999999999987632 233333 56
Q ss_pred e--ccCcchHHHHHHHHHHcCCEEEEecCceecccc-CCCCCCcccc---CCCCeeeecCChhHHHHHHHHHHHHHHHHH
Q 009890 90 N--FEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEW-NFGGFPLWLH---FIPGIQFRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 90 d--F~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw-~~GG~P~WL~---~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
| -++...|+++|++|+++||+||+..- .-| ..||.|.|+. ..+. .-.++|.++++..+++++|+++++
T Consensus 83 ~~~~~~~~~ld~~i~~a~~~Gi~vild~~----~~w~~~g~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~r~~ 156 (344)
T 1qnr_A 83 NTGADGLQTLDYVVQSAEQHNLKLIIPFV----NNWSDYGGINAYVNAFGGNAT--TWYTNTAAQTQYRKYVQAVVSRYA 156 (344)
T ss_dssp CCSTTTTHHHHHHHHHHHHHTCEEEEESC----BSSSTTSHHHHHHHHHCSCTT--GGGGCHHHHHHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEEEec----cCccccCCHHHHHHHhCCChh--hhcCCHHHHHHHHHHHHHHHHHhC
Confidence 6 33455899999999999999999862 223 3566665542 1111 223578889999999999999988
Q ss_pred hcccccccCCceEeccccccccccccccCcccHHHHHHHHHHHHhcCCCcceEE
Q 009890 164 QEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVM 217 (523)
Q Consensus 164 ~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~ 217 (523)
++ +.||+|+|.||.....+. .+.-..+++.+++.+++.+-..|++.
T Consensus 157 ~~-------p~v~~w~l~NEp~~~~~~-~~~~~~~~~~~~~~ir~~dp~~~v~~ 202 (344)
T 1qnr_A 157 NS-------TAIFAWELGNEPRCNGCS-TDVIVQWATSVSQYVKSLDSNHLVTL 202 (344)
T ss_dssp TC-------TTEEEEESCBSCCCTTCC-THHHHHHHHHHHHHHHHHCSSSEEEC
T ss_pred CC-------CcEEEEEcccCcccCCCC-hHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 55 489999999999753210 11123455555566667777776554
|
| >3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.5e-13 Score=153.47 Aligned_cols=153 Identities=17% Similarity=0.213 Sum_probs=124.8
Q ss_pred eeEEEe-cceEEECCEEEEEEEEEeeCC------CCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchH
Q 009890 25 ANVTYD-HRAVVIGGKRRVLISGSIHYP------RSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDL 97 (523)
Q Consensus 25 ~~vt~d-~~~l~idGk~~~l~sG~iHy~------R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL 97 (523)
.+|+++ +..|.|||||+++.+++.|.. +.+++.|+++|+.||++|+|+||++ |.|.+
T Consensus 266 R~i~~~~~~~f~lNGk~~~l~G~n~h~~~~~~G~~~~~~~~~~dl~~~k~~G~N~vR~~-----h~p~~----------- 329 (667)
T 3cmg_A 266 RYYHTDPDKGFFLNGKHLPLHGVCRHQDRAEVGNALRPQHHEEDVALMREMGVNAIRLA-----HYPQA----------- 329 (667)
T ss_dssp CCEEEETTTEEEETTEECCCEEEECCSCBTTTBTCCCHHHHHHHHHHHHHTTCCEEEET-----TSCCC-----------
T ss_pred EEEEEeCCCcEEECCEEEEEEEEEcCcCccccccCCCHHHHHHHHHHHHHCCCCEEEec-----CCCCC-----------
Confidence 458888 688999999999999999864 4588999999999999999999995 66644
Q ss_pred HHHHHHHHHcCCEEEEecCceecc-ccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceE
Q 009890 98 VKFVKLVAEAGLYAHLRIGPYVCA-EWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPII 176 (523)
Q Consensus 98 ~~fl~la~~~GL~Vilr~GPyi~a-Ew~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII 176 (523)
.+|+++|.++||+|+..+ |++|. .|..+ ...++|.|++..++.+++++++.+.| +.||
T Consensus 330 ~~~~~~cD~~Gl~V~~e~-~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~v~r~rNH-------PSIi 388 (667)
T 3cmg_A 330 TYMYDLMDKHGIVTWAEI-PFVGPGGYADK-------------GFVDQASFRENGKQQLIELIRQHYNH-------PSIC 388 (667)
T ss_dssp HHHHHHHHHHTCEEEEEC-CCBCCTTSSSC-------------SCCCSHHHHHHHHHHHHHHHHHHTTC-------TTEE
T ss_pred HHHHHHHHHCCCEEEEcc-cccCcCccccc-------------cccCCHHHHHHHHHHHHHHHHHcCCC-------CEEE
Confidence 789999999999999988 65552 22211 12367899999999999998888755 5999
Q ss_pred eccccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEc
Q 009890 177 LSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMC 218 (523)
Q Consensus 177 ~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~ 218 (523)
+|.|.||.+.. +.....|++.|.+.+++++...|+...
T Consensus 389 ~W~~gNE~~~~----~~~~~~~~~~l~~~vk~~DptRpvt~~ 426 (667)
T 3cmg_A 389 FWGLFNELKEV----GDNPVEYVKELNALAKQEDPTRPTTSA 426 (667)
T ss_dssp EEEEEESCCSS----SSCCHHHHHHHHHHHHHHCTTSCEEEE
T ss_pred EEecccCCCcc----chhHHHHHHHHHHHHHHHCCCCcEEEe
Confidence 99999998753 234678999999999999988887654
|
| >3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.3e-13 Score=154.71 Aligned_cols=183 Identities=15% Similarity=0.083 Sum_probs=134.1
Q ss_pred eeEEEe-cceEEECCEEEEEEEEEeeCC------CCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchH
Q 009890 25 ANVTYD-HRAVVIGGKRRVLISGSIHYP------RSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDL 97 (523)
Q Consensus 25 ~~vt~d-~~~l~idGk~~~l~sG~iHy~------R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL 97 (523)
.+|+++ +..|.|||+|+++.+++.|.. +.+++.|+++|+.||++|+|+||+ .|.|.+
T Consensus 280 R~ie~~~~~~f~lNG~~i~l~G~n~h~~~~~~G~~~~~e~~~~dl~l~k~~G~N~iR~-----~h~p~~----------- 343 (692)
T 3fn9_A 280 RKYEIVAGKGFFLNGEKYSMYGVTRHQDWWGLGSALKNEHHDFDLAAIMDVGATTVRF-----AHYQQS----------- 343 (692)
T ss_dssp CCEEEETTTEEEETTEECCCEEEECCSCBTTTBTCCCHHHHHHHHHHHHHHTCCEEEE-----TTSCCC-----------
T ss_pred eEEEEECCCceEECCeeeeeeccccCCCcccccccccHHHHHHHHHHHHHCCCCEEEe-----cCCCCc-----------
Confidence 458888 468999999999999999974 468999999999999999999999 365554
Q ss_pred HHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEe
Q 009890 98 VKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIIL 177 (523)
Q Consensus 98 ~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~ 177 (523)
++|+++|.++||+|+..+ |+.|. .++|. ++.+++.+++++++.+.| +.||+
T Consensus 344 ~~~~dlcDe~Gi~V~~E~-~~~~~--------------------~~~~~-~~~~~~~~~~~v~r~rNH-------PSIi~ 394 (692)
T 3fn9_A 344 DYLYSRCDTLGLIIWAEI-PCVNR--------------------VTGYE-TENAQSQLRELIRQSFNH-------PSIYV 394 (692)
T ss_dssp HHHHHHHHHHTCEEEEEC-CCBSC--------------------CCSSC-HHHHHHHHHHHHHHHTTC-------TTEEE
T ss_pred HHHHHHHHHCCCEEEEcc-cccCC--------------------CCCHH-HHHHHHHHHHHHHHhcCC-------CcceE
Confidence 899999999999999876 33321 23444 666777777777777754 59999
Q ss_pred ccccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEccCC---CCC----Cccc--cCCCCcccC----------C
Q 009890 178 SQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQS---DAP----DPII--NTCNGFYCD----------Q 238 (523)
Q Consensus 178 ~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~~~---~~p----~~vi--~~~ng~~~~----------~ 238 (523)
|.+.||.+.. +.....|++.|.+.+++++...|+..+... +.+ ..++ +...|.|.. .
T Consensus 395 Ws~gNE~~~~----~~~~~~~~~~l~~~~k~~DptRpvt~~~~~~~~~~~~~~~~Dv~~~n~Y~gWY~~~~~~~~~~~~~ 470 (692)
T 3fn9_A 395 WGLHNEVYQP----HEYTAALTRSLHDLAKTEDPDRYTVSVNGYGHMDHPVNLNADIQGMNRYFGWYEKKIQDIKPWVEQ 470 (692)
T ss_dssp EEEEESCCSS----HHHHHHHHHHHHHHHHHHCTTSEEEEEESSSCTTCTTCSSSSEEEEECCBTTTBSCGGGHHHHHHH
T ss_pred EEeccccCcc----cccHHHHHHHHHHHHHHHCCCCCEEEeCCCccccccccccCCcccccccccccCCchHHHHHHHHH
Confidence 9999998752 234568999999999999999988765543 111 0111 122233321 1
Q ss_pred CCCCCCCCCceEeeeccc
Q 009890 239 FTPNSNNKPKMWTENWSG 256 (523)
Q Consensus 239 ~~~~~~~~P~~~tE~~~G 256 (523)
+....|++|.|.+|+..+
T Consensus 471 ~~~~~p~kPii~sEyG~~ 488 (692)
T 3fn9_A 471 LEKDYPYQKLMLTEYGAD 488 (692)
T ss_dssp HHHHCTTCCEEEEECCCC
T ss_pred HHHHhcCccEEEEEEcCC
Confidence 112458999999999653
|
| >4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} | Back alignment and structure |
|---|
Probab=99.51 E-value=5.1e-14 Score=139.60 Aligned_cols=180 Identities=14% Similarity=0.146 Sum_probs=127.7
Q ss_pred EEEecceEEECCEEEEEEEEEeeCCC-CCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeec--------------
Q 009890 27 VTYDHRAVVIGGKRRVLISGSIHYPR-STPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNF-------------- 91 (523)
Q Consensus 27 vt~d~~~l~idGk~~~l~sG~iHy~R-~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF-------------- 91 (523)
|+.++..|++||||+++.+...|+.. .+++..++.|+.||++|+|+||++++|....+.+..+..
T Consensus 7 v~~~g~~f~~nG~~~~~~G~N~~~~~~~~~~~~~~~l~~~~~~G~N~iR~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 86 (387)
T 4awe_A 7 VTTEGDHFKLDGKDFYFAGSNAYYFPFNDQPDIEKGMTAARAAGLTVFRTWGFNDKNRTYIPTGLPQYGNEGAGDPTNTV 86 (387)
T ss_dssp CEEETTEEEETTEECCEEEEECTTGGGSCHHHHHHHHHHHHHTTCCEEEEECCCEEESSCCTTCSSCCCCCTTCCTTCCC
T ss_pred EEEECCEEEECCEEEEEEEEccCcCCCCCHHHHHHHHHHHHhCCCCEEEeCcccCCCccCccccchhhhccccccccchh
Confidence 88999999999999999999988755 488899999999999999999999998877766543321
Q ss_pred -----------cCcchHHHHHHHHHHcCCEEEEecCceeccccC-CCCCCccccCC--CCeeeecCChhHHHHHHHHHHH
Q 009890 92 -----------EGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWN-FGGFPLWLHFI--PGIQFRTDNEPFKAEMQRFTAK 157 (523)
Q Consensus 92 -----------~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~-~GG~P~WL~~~--p~i~~Rt~d~~fl~~~~~~~~~ 157 (523)
+....++.++++|+++||+|++..- ..|. .||...+.... .....-.+|+.++++.+++++.
T Consensus 87 ~~~~~~~~~~~~~~~~~d~~~~~a~~~gi~v~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (387)
T 4awe_A 87 FQWFEADGTQTIDVSPFDKVVDSATKTGIKLIVALT----NNWADYGGMDVYTVNLGGKYHDDFYTVPKIKEAFKRYVKA 162 (387)
T ss_dssp SEEECTTSCEEECCGGGHHHHHHHHHHTCEEEEECC----BSSSTTCCHHHHHHHTTCCSTTHHHHCHHHHHHHHHHHHH
T ss_pred hhhcccCccchhhhhhHHHHHHHHHHcCCEEEEeec----ccccccCCCcccccccccccccccccCHHHHHHHHHHHHH
Confidence 1223689999999999999998762 1221 23322211110 1001223467788888889999
Q ss_pred HHHHHHhcccccccCCceEeccccccccccccccC--------ccc---HHHHHHHHHHHHhcCCCcceEE
Q 009890 158 IVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYG--------AAG---KSYIKWAAGMALSLDTGVPWVM 217 (523)
Q Consensus 158 i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g--------~~~---~~y~~~l~~~~~~~g~~vP~~~ 217 (523)
++++.|.+| .||+|+|-||+.......+ ... ..+++.+++..++.+...|++.
T Consensus 163 ~~~r~k~~p-------~I~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~Dp~~lv~~ 226 (387)
T 4awe_A 163 MVTRYRDSE-------AILAWELANEARCGADGTRNLPRSEKGCTTETVTGWIEEMSAYVKSLDGNHLVTW 226 (387)
T ss_dssp HHHHHTTCT-------TEEEEESCBSCCSCCCTTTSCCCCSSSCCHHHHHHHHHHHHHHHHHHCSSSEEEC
T ss_pred HHhhcCCCc-------ceeEeccCCCCCCCCCccccccccccccchHHHHHHHHHHHHHHHHhCCCCcEEE
Confidence 999888654 7999999999865321111 112 3455666677777887777654
|
| >3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.8e-13 Score=155.82 Aligned_cols=187 Identities=18% Similarity=0.154 Sum_probs=134.2
Q ss_pred eeEEEe-cceEEECCEEEEEEEEEeeCC------CCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchH
Q 009890 25 ANVTYD-HRAVVIGGKRRVLISGSIHYP------RSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDL 97 (523)
Q Consensus 25 ~~vt~d-~~~l~idGk~~~l~sG~iHy~------R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL 97 (523)
.+|+++ +..|+|||+|+++.+.+.|.. +.+++.|+++|+.||++|+|+||+ .|-|..
T Consensus 269 R~ie~~~~~~f~LNGk~i~lkGvn~h~d~~~~G~a~~~~~~~~dl~~~K~~G~N~iR~-----~h~p~~----------- 332 (801)
T 3gm8_A 269 RQLEFNPVSGFLLNGKSLKIKGVCDHHTVGAVGAAVPDDLLHYRLKLLKDMGCNAIRT-----SHNPFS----------- 332 (801)
T ss_dssp CCEEEETTTEEEETTEECCEEEEEECSCCGGGTTCCCHHHHHHHHHHHHHTTCCEEEE-----TTSCCC-----------
T ss_pred eEEEEecCCeeEECCEEeEEEccCcCCCCcccCccCCHHHHHHHHHHHHHCCCcEEEe-----cCCCCc-----------
Confidence 458888 679999999999999999975 568999999999999999999999 455543
Q ss_pred HHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEe
Q 009890 98 VKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIIL 177 (523)
Q Consensus 98 ~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~ 177 (523)
.+|+++|.++||+|+... +.+|..++.| ...++.|.+.+++-+++++++.+.|| .||+
T Consensus 333 ~~~~dlcDe~GilV~~E~----~~~w~~~~~~-----------~~~~~~~~~~~~~~~~~mv~r~rNHP-------SIi~ 390 (801)
T 3gm8_A 333 PAFYNLCDTMGIMVLNEG----LDGWNQPKAA-----------DDYGNYFDEWWQKDMTDFIKRDRNHP-------SIIM 390 (801)
T ss_dssp HHHHHHHHHHTCEEEEEC----CSSSSSCSST-----------TSGGGTHHHHHHHHHHHHHHHHTTCT-------TEEE
T ss_pred HHHHHHHHHCCCEEEECC----chhhcCCCCc-----------ccccHHHHHHHHHHHHHHHHhcCCCC-------eEEE
Confidence 899999999999999875 4566543322 11235677777777777877777554 8999
Q ss_pred ccccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEccCC-CCC--C---cc---cc--CCCCccc--CC---CCC
Q 009890 178 SQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQS-DAP--D---PI---IN--TCNGFYC--DQ---FTP 241 (523)
Q Consensus 178 ~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~~~-~~p--~---~v---i~--~~ng~~~--~~---~~~ 241 (523)
|++.||.. | ....+++.|.+++++++..-|....... +.. . .+ ++ ..|-... +. +..
T Consensus 391 Ws~gNE~~------g-~~~~~~~~l~~~~k~~DptRpvt~~~~~~~~~~~~~~~~~~~~~Dv~g~ny~~~~y~~~~~~~~ 463 (801)
T 3gm8_A 391 WSIGNEVT------G-ATPEIQHNLVSLFHQLDPDRPVTQGGTDPTRGMKTDYQKKFNYLDIIGFNGNGEEIGELEHFHK 463 (801)
T ss_dssp EEEEESCS------S-CCHHHHHHHHHHHHHHCTTSCEEEETCCC------------CCCSEEEECGGGGSTTHHHHHHH
T ss_pred EECccCCC------C-cHHHHHHHHHHHHHHHCCCCCEEEcccccccccccchhhcccccCEEEeccchhhhhhhHHHHH
Confidence 99999982 2 1258999999999999998887643221 100 0 11 11 1121000 11 224
Q ss_pred CCCCCCceEeeeccc
Q 009890 242 NSNNKPKMWTENWSG 256 (523)
Q Consensus 242 ~~~~~P~~~tE~~~G 256 (523)
..|++|.+.+|+..+
T Consensus 464 ~~p~kpi~~sE~~~~ 478 (801)
T 3gm8_A 464 NYPTLCAIATEVPHT 478 (801)
T ss_dssp HCTTSEEEESSCCBB
T ss_pred hCCCCcEEEEeCCCc
Confidence 568999999999754
|
| >3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A | Back alignment and structure |
|---|
Probab=99.48 E-value=1e-12 Score=145.23 Aligned_cols=161 Identities=15% Similarity=0.066 Sum_probs=123.4
Q ss_pred eeEEEecceEEECCEEEEEEEEEeeCCC------CCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHH
Q 009890 25 ANVTYDHRAVVIGGKRRVLISGSIHYPR------STPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLV 98 (523)
Q Consensus 25 ~~vt~d~~~l~idGk~~~l~sG~iHy~R------~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~ 98 (523)
.+|++++..|+|||+|+++.+...|... .+++.++++|+.||++|+|+||+ .|-|.. .
T Consensus 274 R~v~~~~~~f~lNG~~~~l~G~~~h~~~~~~g~~~~~~~~~~di~l~k~~g~N~vR~-----~hyp~~-----------~ 337 (605)
T 3lpf_A 274 RSVAVKGEQFLINHKPFYFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRT-----SHYPYA-----------E 337 (605)
T ss_dssp CCEEEETTEEEETTEECCEEEEEECSCCTTTTTCCCHHHHHHHHHHHHHHTCCEEEE-----CSSCCC-----------H
T ss_pred EEEEEcCCEEEECCEEEEEEeeecCcCcccccccCCHHHHHHHHHHHHHCCCcEEEe-----cCCCCc-----------H
Confidence 5688999999999999999999999754 46788999999999999999999 566654 7
Q ss_pred HHHHHHHHcCCEEEEecCcee------ccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccC
Q 009890 99 KFVKLVAEAGLYAHLRIGPYV------CAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQG 172 (523)
Q Consensus 99 ~fl~la~~~GL~Vilr~GPyi------~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~g 172 (523)
+|+++|.++||+|+... |.. +..|+.|..|..+... ..+++.++++..+-+++++++.+.||
T Consensus 338 ~~~~lcD~~Gi~V~~E~-~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~v~r~~NHP------ 405 (605)
T 3lpf_A 338 EMLDWADEHGIVVIDET-AAVGFNLSLGIGFEAGNKPKELYSE-----EAVNGETQQAHLQAIKELIARDKNHP------ 405 (605)
T ss_dssp HHHHHHHHHTCEEEEEC-SCBCCCSSCCCSCCCCCCCSCSSST-----TTSCHHHHHHHHHHHHHHHHHHTTCT------
T ss_pred HHHHHHHhcCCEEEEec-cccccccccccccccccCccccccc-----cccCHHHHHHHHHHHHHHHHHcCCCC------
Confidence 89999999999999876 221 1112222233221111 12478899888888888888888665
Q ss_pred CceEeccccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEc
Q 009890 173 GPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMC 218 (523)
Q Consensus 173 GpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~ 218 (523)
.||+|.+.||..... .....+++.|.+.+++++..-|+...
T Consensus 406 -SIi~Ws~gNE~~~~~----~~~~~~~~~l~~~~k~~DptRpvt~~ 446 (605)
T 3lpf_A 406 -SVVMWSIANEPDTRP----QGAREYFAPLAEATRKLDPTRPITCV 446 (605)
T ss_dssp -TEEEEEEEESCCCCS----TTHHHHHHHHHHHHHHHCSSSCEEEE
T ss_pred -eEEEEecCccccccc----chHHHHHHHHHHHHHHHCCCCcEEEe
Confidence 899999999986421 23457999999999999999887643
|
| >3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.5e-12 Score=143.90 Aligned_cols=151 Identities=15% Similarity=0.091 Sum_probs=121.3
Q ss_pred CeeEEEecceEEECCEEEEEEEEEeeCCC------CCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchH
Q 009890 24 GANVTYDHRAVVIGGKRRVLISGSIHYPR------STPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDL 97 (523)
Q Consensus 24 ~~~vt~d~~~l~idGk~~~l~sG~iHy~R------~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL 97 (523)
-.+|++++..|.|||+|+++.+...|... .+++.|..+|+.||++|+|+||+ .|.|.+
T Consensus 306 ~R~i~~~~~~f~lNG~~~~l~G~~~h~~~~~~g~~~~~~~~~~d~~~~k~~G~N~vR~-----~h~p~~----------- 369 (613)
T 3hn3_A 306 IRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRT-----SHYPYA----------- 369 (613)
T ss_dssp CCCEEECSSCEEETTEEECEEEEECCSCBTTTBTCCCHHHHHHHHHHHHHHTCCEEEC-----TTSCCC-----------
T ss_pred ceEEEEECCEEEECCEEeeeceeeecCCccccCccCCHHHHHHHHHHHHHcCCCEEEc-----cCCCCh-----------
Confidence 35688899999999999999999999742 47888999999999999999999 577655
Q ss_pred HHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEe
Q 009890 98 VKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIIL 177 (523)
Q Consensus 98 ~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~ 177 (523)
.+|+++|.++||+|+..+ | .|-...|. ..++.+++...+.+++++++.+.|| .||+
T Consensus 370 ~~~~~~cD~~Gi~V~~e~-~------------~~~~~~~~----~~~~~~~~~~~~~~~~~v~r~~nhP-------SIi~ 425 (613)
T 3hn3_A 370 EEVMQMCDRYGIVVIDEC-P------------GVGLALPQ----FFNNVSLHHHMQVMEEVVRRDKNHP-------AVVM 425 (613)
T ss_dssp HHHHHHHHHHTCEEEEEC-S------------CBCCCSGG----GCCHHHHHHHHHHHHHHHHHHTTCT-------TEEE
T ss_pred HHHHHHHHHCCCEEEEec-c------------cccccccc----ccChHHHHHHHHHHHHHHHHhCCCC-------eEEE
Confidence 489999999999999876 2 12111121 2457788888888888888888665 8999
Q ss_pred ccccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEc
Q 009890 178 SQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMC 218 (523)
Q Consensus 178 ~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~ 218 (523)
|.+.||.+... .....|++.+.+.+++++...|++++
T Consensus 426 W~~~NE~~~~~----~~~~~~~~~l~~~~k~~DptRpv~~~ 462 (613)
T 3hn3_A 426 WSVANEPASHL----ESAGYYLKMVIAHTKSLDPSRPVTFV 462 (613)
T ss_dssp EEEEESCCTTS----HHHHHHHHHHHHHHHHHCTTSCEEEE
T ss_pred EecccCccccc----chHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 99999987421 23568999999999999999998885
|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.47 E-value=4.1e-13 Score=136.55 Aligned_cols=171 Identities=11% Similarity=0.173 Sum_probs=119.6
Q ss_pred eeEEEecceEEECCEEEEEEEEEeeCC----CCC-------ccchHHHHHHHHhCCCCEEEEccccC-cCCC---CCce-
Q 009890 25 ANVTYDHRAVVIGGKRRVLISGSIHYP----RST-------PEMWPDLIQKSKDGGLDVIETYVFWN-LHEP---VRNQ- 88 (523)
Q Consensus 25 ~~vt~d~~~l~idGk~~~l~sG~iHy~----R~~-------~~~W~d~l~k~Ka~GlN~V~tYvfWn-~HEp---~~G~- 88 (523)
..|+.++..|.+||+|+++.+..+|.. +.. ++.|+++|+.||++|+|+||++++|. ..+| .+|.
T Consensus 3 ~~v~v~g~~~~~nG~~~~~~GvN~~w~~~~~~~~~~~~~~~~~~~~~d~~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~~ 82 (353)
T 2c0h_A 3 VRLSVSGTNLNYNGHHIFLSGANQAWVNYARDFGHNQYSKGKSTFESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYV 82 (353)
T ss_dssp CCEEEETTEEEETTEEECEEEEECCCSSTTCSSSTTCHHHHHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCE
T ss_pred ceEEEeCCEEEECCeEEEEEEEEHHhhhccccccCCccccchHHHHHHHHHHHHcCCCEEEEceecCCccCccccCCCcc
Confidence 568999999999999999999988532 222 55677899999999999999998754 4445 3332
Q ss_pred -----eeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCee----eecCChhHHHHHHHHHHHHH
Q 009890 89 -----YNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQ----FRTDNEPFKAEMQRFTAKIV 159 (523)
Q Consensus 89 -----ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~----~Rt~d~~fl~~~~~~~~~i~ 159 (523)
..|+ .+++++++|+++||+||+-. |+ .|... |+-. +-.+.+.+.+++++.+++|+
T Consensus 83 ~~~~~~~~~---~ld~~~~~a~~~Gi~vil~l-------~~-----~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~a 146 (353)
T 2c0h_A 83 TGIDNTLIS---DMRAYLHAAQRHNILIFFTL-------WN-----GAVKQ-STHYRLNGLMVDTRKLQSYIDHALKPMA 146 (353)
T ss_dssp EECCTTHHH---HHHHHHHHHHHTTCEEEEEE-------EE-----CSCCC-TTHHHHHHHHHCHHHHHHHHHHTHHHHH
T ss_pred ccCCHHHHH---HHHHHHHHHHHcCCEEEEEc-------cC-----ccccC-CCcccccceEeCHHHHHHHHHHHHHHHH
Confidence 2333 79999999999999999876 22 13221 2210 11233456666666778888
Q ss_pred HHHHhcccccccCCceEeccccccccccc--------cccC------------------cccHHHHHHHHHHHHhcCCCc
Q 009890 160 DMMKQEKLYASQGGPIILSQIENEYGNID--------SAYG------------------AAGKSYIKWAAGMALSLDTGV 213 (523)
Q Consensus 160 ~~ik~~~l~~~~gGpII~~QIENEyg~~~--------~~~g------------------~~~~~y~~~l~~~~~~~g~~v 213 (523)
+++|.++ .|++|+|-||..... ..|. ..-.++.+++.+.+|+.+...
T Consensus 147 ~ry~~~p-------~i~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~Ir~~dp~~ 219 (353)
T 2c0h_A 147 NALKNEK-------ALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEIGRFVNWQAAAIKEVDPGA 219 (353)
T ss_dssp HHHTTCT-------TEEEEEEEECGGGGBCCSCCCSSGGGCCGGGTTSCTTTTCSCBCHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHhCCCC-------cEEEEeccCCCCCccccccCCCccccccccccccccccccccCcHHHHHHHHHHHHHHHHhhCCCC
Confidence 8888554 799999999997531 0011 122456777888899988888
Q ss_pred ceEEc
Q 009890 214 PWVMC 218 (523)
Q Consensus 214 P~~~~ 218 (523)
|++..
T Consensus 220 ~V~~~ 224 (353)
T 2c0h_A 220 MVTVG 224 (353)
T ss_dssp CEEEE
T ss_pred eEEEC
Confidence 87754
|
| >3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.9e-13 Score=134.60 Aligned_cols=176 Identities=13% Similarity=0.097 Sum_probs=119.1
Q ss_pred eEEEecceEEECCEEEEEEEEEeeCCC-----------CCccchHHHHHHHHhCCCCEEEEccccCcCC--------CCC
Q 009890 26 NVTYDHRAVVIGGKRRVLISGSIHYPR-----------STPEMWPDLIQKSKDGGLDVIETYVFWNLHE--------PVR 86 (523)
Q Consensus 26 ~vt~d~~~l~idGk~~~l~sG~iHy~R-----------~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HE--------p~~ 86 (523)
+|+.++..|++||||+++.+...|... .+++.+++.|+.||++|+|+||+++++.... ...
T Consensus 1 rv~v~g~~f~~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~ 80 (351)
T 3vup_A 1 RLHIQNGHFVLNGQRVFLSGGNLPWMSYAYDFGDGQWQRNKNRIEPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVT 80 (351)
T ss_dssp CCEEETTEEEETTEEBCEEEEECCCSSTTCSSSTTHHHHHHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEE
T ss_pred CEEEECCEEEECCEEEEEEEEecCccccccccCcccCcCCHHHHHHHHHHHHHcCCcEEEECcccccccCcccccccccc
Confidence 478999999999999999999876432 1456788999999999999999999865433 111
Q ss_pred ce-eeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhc
Q 009890 87 NQ-YNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQE 165 (523)
Q Consensus 87 G~-ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~ 165 (523)
+. ++-+.-..+++|+++|.++||+||+-. +..|..++-+.+. ...-.+++...++++++++.|++++|.+
T Consensus 81 ~~~~~~~~~~~~d~~~~~a~~~Gi~vil~~----~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~v~r~kn~ 151 (351)
T 3vup_A 81 GPDKQGTMLDDMKDLLDTAKKYNILVFPCL----WNAAVNQDSHNRL-----DGLIKDQHKLQSYIDKALKPIVNHVKGH 151 (351)
T ss_dssp ESCSSSCHHHHHHHHHHHHHHTTCEEEEEE----EECSSCCCGGGHH-----HHHHHCHHHHHHHHHHTHHHHHHHTTTC
T ss_pred cccccHHHHHHHHHHHHHHHHCCCeEEEEe----cccccccCCCCcc-----ccccCCcHHHHHHHHHHHHHHHHHhcCC
Confidence 11 111223468999999999999999875 2222222211111 1122355667777888888998888866
Q ss_pred ccccccCCceEeccccccccccccccC--------------------------cccHHHHHHHHHHHHhcCCCcceEE
Q 009890 166 KLYASQGGPIILSQIENEYGNIDSAYG--------------------------AAGKSYIKWAAGMALSLDTGVPWVM 217 (523)
Q Consensus 166 ~l~~~~gGpII~~QIENEyg~~~~~~g--------------------------~~~~~y~~~l~~~~~~~g~~vP~~~ 217 (523)
+ .||+|.|-||......... ..-.++++.+++..++.+...|+..
T Consensus 152 p-------si~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~dp~~lv~~ 222 (351)
T 3vup_A 152 V-------ALGGWDLMNEPEGMMIPDKHNAEKCYDTTALKNSGAGWAGNKYLYQDILRFLNWQADAIKTTDPGALVTM 222 (351)
T ss_dssp T-------TBCCEEEEECGGGGBCCSCCCSSGGGCCGGGTTSSTTTTCSCBCHHHHHHHHHHHHHHHHHHSTTCCEEE
T ss_pred C-------ceEEEEecccccccccccccccccccccchhhcccccccccccchhhHHHHHHHHHHHhhccCCCCeeEe
Confidence 4 8999999999753211000 1123456667777778887777654
|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=2.1e-13 Score=149.14 Aligned_cols=154 Identities=14% Similarity=0.174 Sum_probs=112.5
Q ss_pred eeEEEecceEEE--CCEEEEEEEEEeeC-----C----C-----------CCccchHHHHHHHHhCCCCEEEEccccCcC
Q 009890 25 ANVTYDHRAVVI--GGKRRVLISGSIHY-----P----R-----------STPEMWPDLIQKSKDGGLDVIETYVFWNLH 82 (523)
Q Consensus 25 ~~vt~d~~~l~i--dGk~~~l~sG~iHy-----~----R-----------~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~H 82 (523)
..|++.+..|++ ||+|+++.+...|+ . + .+++.|.++++.||++|+|+||+| +.
T Consensus 34 r~I~VkG~~f~~~~NG~~f~lkGVny~p~~~~~~~~~G~~~~~~~~~d~l~~~e~~~rDi~LmK~~GiN~VRvy----~~ 109 (555)
T 2w61_A 34 PAIKIVGNKFFDSESGEQFFIKGIAYQLQRSEEELSNANGAFETSYIDALADPKICLRDIPFLKMLGVNTLRVY----AI 109 (555)
T ss_dssp CCEEEETTEEEETTTCCBCCEEEEECCCCCC------CTTTTCCSSCCGGGCHHHHHHHHHHHHHHTCSEEEEC----CC
T ss_pred ceEEEECCEEEECCCCeEEEEEEEECCCcccccccccCCccccccccccCCCHHHHHHHHHHHHHcCCCEEEEe----cc
Confidence 669999999999 99999999999998 1 1 257889999999999999999995 45
Q ss_pred CCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHH
Q 009890 83 EPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMM 162 (523)
Q Consensus 83 Ep~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~i 162 (523)
+|.++. ++++++|.++|||||+... . | ...+..++|.|.++..+.+++++++.
T Consensus 110 ~P~~~~---------d~~ldl~~~~GIyVIle~~--------~---p-------~~~i~~~~P~~~~~~~~r~~~~V~ry 162 (555)
T 2w61_A 110 DPTKSH---------DICMEALSAEGMYVLLDLS--------E---P-------DISINRENPSWDVHIFERYKSVIDAM 162 (555)
T ss_dssp CTTSCC---------HHHHHHHHHTTCEEEEESC--------B---T-------TBSCCTTSCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCh---------HHHHHHHHhcCCEEEEeCC--------C---C-------CcccccCCHHHHHHHHHHHHHHHHHc
Confidence 666643 7999999999999999752 0 1 00012257788888888888888888
Q ss_pred HhcccccccCCceEeccccccccccccccCccc----HHHHHHHHHHHHhcCCC-cceEEc
Q 009890 163 KQEKLYASQGGPIILSQIENEYGNIDSAYGAAG----KSYIKWAAGMALSLDTG-VPWVMC 218 (523)
Q Consensus 163 k~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~----~~y~~~l~~~~~~~g~~-vP~~~~ 218 (523)
+.|+ +||+|+|.||++.... . ... +..++.+++..++.+.. +|+-..
T Consensus 163 ~nhP-------~Vi~W~vGNE~~~~~~-~-~~~~~y~~aa~r~~~~~lk~~d~R~IpVgy~ 214 (555)
T 2w61_A 163 SSFP-------NLLGYFAGNQVTNDHT-N-TFASPFVKAAIRDAKEYISHSNHRKIPVGYS 214 (555)
T ss_dssp TTCT-------TEEEEEEEESSSCSTT-C-GGGHHHHHHHHHHHHHHHHHSSSCCCCEEEE
T ss_pred CCCC-------cEEEEEeCccccCCCc-c-chhhHHHHHHHHHHHHHHHhcCCCcceeecc
Confidence 8664 8999999999986311 1 111 23345555556655543 454443
|
| >4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=2.7e-13 Score=140.24 Aligned_cols=167 Identities=16% Similarity=0.092 Sum_probs=123.2
Q ss_pred eeEEEecceEE-ECCEEEEEEEEEeeCCCC---CccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHH
Q 009890 25 ANVTYDHRAVV-IGGKRRVLISGSIHYPRS---TPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKF 100 (523)
Q Consensus 25 ~~vt~d~~~l~-idGk~~~l~sG~iHy~R~---~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~f 100 (523)
..|+.+++.|+ .||+|+++.+.+.|.... ....++++|+.||++|+|+||+.+.|...++..++..|+ .|+++
T Consensus 50 ~~l~v~G~~~~d~nG~~~~l~Gvn~~~~~~~~~~g~~~~~di~~ik~~G~N~VRi~~~~~~~~~~~~~~~l~---~ld~~ 126 (359)
T 4hty_A 50 PLIKVEGNRFVDEQGKTIVFRGVNISDPDKIDKDKRFSKKHFEVIRSWGANVVRVPVHPRAWKERGVKGYLE---LLDQV 126 (359)
T ss_dssp CCCEEETTEEECTTCCEECCEEEEECCHHHHHHTTCCSHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHH---HHHHH
T ss_pred CcEEEeCCEEECCCCCEEEEEEEecCCcccCCCCCCcCHHHHHHHHhcCCCEEEEeccHHHhhccCCHHHHH---HHHHH
Confidence 34899999999 999999999999985321 223348899999999999999999998877766555554 79999
Q ss_pred HHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChh---HHHHHHHHHHHHHHHHHhcccccccCCceEe
Q 009890 101 VKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEP---FKAEMQRFTAKIVDMMKQEKLYASQGGPIIL 177 (523)
Q Consensus 101 l~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~---fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~ 177 (523)
|++|.++||+|||-.--+ |.+ ..+ + ..++. .+++..+++++|++++|.+ ..||+
T Consensus 127 v~~a~~~Gi~Vild~H~~----------~~~---~~~--~-~~~~~~~~~~~~~~~~~~~la~ryk~~-------p~Vi~ 183 (359)
T 4hty_A 127 VAWNNELGIYTILDWHSI----------GNL---KSE--M-FQNNSYHTTKGETFDFWRRVSERYNGI-------NSVAF 183 (359)
T ss_dssp HHHHHHTTCEEEEEECCE----------EET---TTT--E-ESSGGGCCCHHHHHHHHHHHHHHTTTC-------TTEEE
T ss_pred HHHHHHCCCEEEEEcCCC----------CCC---Ccc--c-ccCCcchhHHHHHHHHHHHHHHHhCCC-------CcEEE
Confidence 999999999999875211 111 011 1 12333 3678888999999988855 48999
Q ss_pred ccccccccccccccCc----ccHHHHHHHHHHHHhcCCCcceEE
Q 009890 178 SQIENEYGNIDSAYGA----AGKSYIKWAAGMALSLDTGVPWVM 217 (523)
Q Consensus 178 ~QIENEyg~~~~~~g~----~~~~y~~~l~~~~~~~g~~vP~~~ 217 (523)
++|-||........+. .-+.|++.+.+..|+.+...+++.
T Consensus 184 ~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I~v 227 (359)
T 4hty_A 184 YEIFNEPTVFNGRLGIATWAEWKAINEEAITIIQAHNPKAIALV 227 (359)
T ss_dssp EESCSEECCGGGTTCCCCHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EEeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence 9999998753221111 226788889999999988876554
|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A | Back alignment and structure |
|---|
Probab=99.30 E-value=3.5e-11 Score=123.03 Aligned_cols=171 Identities=14% Similarity=0.119 Sum_probs=124.8
Q ss_pred eeEEEecceEE-ECCEEEEEEEEEeeCCC----CCccc----hHHHHHHHHhCCCCEEEEccccCcCCCC--Cceeecc-
Q 009890 25 ANVTYDHRAVV-IGGKRRVLISGSIHYPR----STPEM----WPDLIQKSKDGGLDVIETYVFWNLHEPV--RNQYNFE- 92 (523)
Q Consensus 25 ~~vt~d~~~l~-idGk~~~l~sG~iHy~R----~~~~~----W~d~l~k~Ka~GlN~V~tYvfWn~HEp~--~G~ydF~- 92 (523)
..++.+++.|+ .||+++++.+...+... .++.. +++.|+.||++|+|+||+.+.|..++|. ||.+|..
T Consensus 4 ~~l~v~G~~~~d~~G~~~~l~GvN~~g~~~~~~~~~g~~~~~~~~~~~~~~~~G~n~vRi~~~~~~~~~~~~~~~~~~~~ 83 (358)
T 1ece_A 4 GYWHTSGREILDANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQ 83 (358)
T ss_dssp SCCEEETTEEECTTSCEECCEEEECCCBTTTTCSCTTTTTSCHHHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSS
T ss_pred CCEEEcCCEEEcCCCCEEEEEEEecCCcCccccCccchhhchHHHHHHHHHHcCCCEEEeeccHHHhcCCCCCccccccc
Confidence 45788888887 48999999988865322 23333 5899999999999999999999988874 6888764
Q ss_pred ---------CcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHH
Q 009890 93 ---------GRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 93 ---------G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
....|+++|+.|+++||+|||.+-- ..+. ++-|.|.. ++...++..+++++|++++|
T Consensus 84 ~np~~~g~~~~~~ld~~v~~a~~~Gi~vild~h~---~~~~-~~~~~w~~----------~~~~~~~~~~~~~~ia~r~~ 149 (358)
T 1ece_A 84 MNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHR---PDCS-GQSALWYT----------SSVSEATWISDLQALAQRYK 149 (358)
T ss_dssp SCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEE---SBTT-BCCSSSCC----------SSSCHHHHHHHHHHHHHHTT
T ss_pred cCccccCccHHHHHHHHHHHHHHCCCEEEEecCC---CCCC-CCCCCCcC----------CCccHHHHHHHHHHHHHHhc
Confidence 4456899999999999999987621 1111 12244532 23456778888899988888
Q ss_pred hcccccccCCceEeccccccccccccccC-----cccHHHHHHHHHHHHhcCCCcceEE
Q 009890 164 QEKLYASQGGPIILSQIENEYGNIDSAYG-----AAGKSYIKWAAGMALSLDTGVPWVM 217 (523)
Q Consensus 164 ~~~l~~~~gGpII~~QIENEyg~~~~~~g-----~~~~~y~~~l~~~~~~~g~~vP~~~ 217 (523)
.+ ..||+++|-||...... ++ ..-..+++.+.+..|+.+...+++.
T Consensus 150 ~~-------p~v~~~el~NEP~~~~~-w~~~~~~~~~~~~~~~~~~~Ir~~dp~~~v~v 200 (358)
T 1ece_A 150 GN-------PTVVGFDLHNEPHDPAC-WGCGDPSIDWRLAAERAGNAVLSVNPNLLIFV 200 (358)
T ss_dssp TC-------TTEEEEECSSCCCTTCB-SSCCCTTTBHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CC-------CcEEEEEcccCCCCccc-CCCCCCHHHHHHHHHHHHHHHHhhCCCeEEEE
Confidence 54 47999999999875321 11 1234668888899999888877665
|
| >1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... | Back alignment and structure |
|---|
Probab=99.23 E-value=3.4e-10 Score=131.90 Aligned_cols=150 Identities=17% Similarity=0.161 Sum_probs=116.9
Q ss_pred eeEEEecceEEECCEEEEEEEEEeeCC------CCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHH
Q 009890 25 ANVTYDHRAVVIGGKRRVLISGSIHYP------RSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLV 98 (523)
Q Consensus 25 ~~vt~d~~~l~idGk~~~l~sG~iHy~------R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~ 98 (523)
.+|+++++.|.|||||+++.+...|.. ..+++.|+.+|+.||++|+|+||+. |-|.. .
T Consensus 333 R~ie~~~~~f~lNGkpi~lrGvn~h~~~p~~G~~~~~e~~~~dl~lmK~~g~N~vR~~-----hyp~~-----------~ 396 (1023)
T 1jz7_A 333 REVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCS-----HYPNH-----------P 396 (1023)
T ss_dssp CCEEEETTEEEETTEECCEEEEECCCCBTTTBTCCCHHHHHHHHHHHHHTTCCEEECT-----TSCCC-----------H
T ss_pred EEEEEeCCEEEECCEEEEEEEeeccccCcccccCCCHHHHHHHHHHHHHcCCCEEEec-----CCCCC-----------H
Confidence 458889999999999999999999842 2588999999999999999999993 55432 6
Q ss_pred HHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEec
Q 009890 99 KFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILS 178 (523)
Q Consensus 99 ~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~ 178 (523)
+|+++|.++||+|+... |.. . .|+ |-.. .-.++|.+++++.+-+++++++.+.|| .||+|
T Consensus 397 ~~~dlcDe~Gi~V~~E~-~~~----~-~g~--~~~~-----~~~~~p~~~~~~~~~~~~mV~r~rNHP-------SIi~W 456 (1023)
T 1jz7_A 397 LWYTLCDRYGLYVVDEA-NIE----T-HGM--VPMN-----RLTDDPRWLPAMSERVTRMVQRDRNHP-------SVIIW 456 (1023)
T ss_dssp HHHHHHHHHTCEEEEEC-SCB----C-TTS--SSTT-----TTTTCGGGHHHHHHHHHHHHHHHTTCT-------TEEEE
T ss_pred HHHHHHHHCCCEEEECC-Ccc----c-CCc--cccC-----cCCCCHHHHHHHHHHHHHHHHHhCCCC-------EEEEE
Confidence 89999999999999876 211 1 121 2111 123678899988888888888888665 89999
Q ss_pred cccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEcc
Q 009890 179 QIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQ 219 (523)
Q Consensus 179 QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~ 219 (523)
.+.||.+. + .+++.+.+.+++++-.-|+....
T Consensus 457 slgNE~~~-----~----~~~~~l~~~ik~~DptRpv~~~~ 488 (1023)
T 1jz7_A 457 SLGNESGH-----G----ANHDALYRWIKSVDPSRPVQYEG 488 (1023)
T ss_dssp ECCSSCCC-----C----HHHHHHHHHHHHHCTTSCEECCT
T ss_pred ECccCCcc-----h----HHHHHHHHHHHHhCCCCeEEecC
Confidence 99999863 2 35677888899988888876543
|
| >2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=1.1e-10 Score=133.79 Aligned_cols=153 Identities=12% Similarity=0.182 Sum_probs=114.6
Q ss_pred eeEEEecc--------eEEECCEEEEEEEEEeeC-----CCCCccchHHHHHHHHhCCCCEEEEccccCc-CCCCCceee
Q 009890 25 ANVTYDHR--------AVVIGGKRRVLISGSIHY-----PRSTPEMWPDLIQKSKDGGLDVIETYVFWNL-HEPVRNQYN 90 (523)
Q Consensus 25 ~~vt~d~~--------~l~idGk~~~l~sG~iHy-----~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~-HEp~~G~yd 90 (523)
.+|+++.. .|.|||+|+++.+++.|+ .|.+++.|+++|+.||++|+|+||+ |.. |-| +
T Consensus 308 R~i~~~~~~d~~G~~f~f~lNG~~v~l~G~n~~~~~~~~~~~~~~~~~~~l~~~k~~g~N~iR~---wgg~~y~-~---- 379 (848)
T 2je8_A 308 RTIRVVNEKDKDGESFYFEVNGIPMFAKGANYIPQDALLPNVTTERYQTLFRDMKEANMNMVRI---WGGGTYE-N---- 379 (848)
T ss_dssp CCEEEECCEETTEECCEEEETTEEECEEEEEECCSCSSGGGCCHHHHHHHHHHHHHTTCCEEEE---CTTSCCC-C----
T ss_pred EEEEEEecCCCCCceEEEEECCEEeEEEeEeecCchhcccCCCHHHHHHHHHHHHHcCCcEEEe---CCCccCC-C----
Confidence 45777754 699999999999999986 4578999999999999999999999 632 212 2
Q ss_pred ccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccc
Q 009890 91 FEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYAS 170 (523)
Q Consensus 91 F~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~ 170 (523)
+.|+++|.++||+|+... |+.|+ .. ..++.|++.+++-+++++++.+.||
T Consensus 380 -------~~~~d~cD~~GilV~~e~-~~~~~------------~~------~~~~~~~~~~~~~~~~~v~r~~nHP---- 429 (848)
T 2je8_A 380 -------NLFYDLADENGILVWQDF-MFACT------------PY------PSDPTFLKRVEAEAVYNIRRLRNHA---- 429 (848)
T ss_dssp -------HHHHHHHHHHTCEEEEEC-SCBSS------------CC------CCCHHHHHHHHHHHHHHHHHHTTCT----
T ss_pred -------HHHHHHHHHcCCEEEECc-ccccC------------CC------CCCHHHHHHHHHHHHHHHHHhcCCC----
Confidence 479999999999998865 22221 01 2468899999999999999888665
Q ss_pred cCCceEeccccccccccccccCc--------cc-------HHHHHHHHHHHHhcCCCcceEEc
Q 009890 171 QGGPIILSQIENEYGNIDSAYGA--------AG-------KSYIKWAAGMALSLDTGVPWVMC 218 (523)
Q Consensus 171 ~gGpII~~QIENEyg~~~~~~g~--------~~-------~~y~~~l~~~~~~~g~~vP~~~~ 218 (523)
.||+|.+.||.......++. .. ..|.+.|.+++++++-+.|+...
T Consensus 430 ---Sii~W~~~NE~~~~~~~w~~~~~~~~~~~~~~~~~y~~~~~~~l~~~vk~~Dptr~v~~~ 489 (848)
T 2je8_A 430 ---SLAMWCGNNEILEALKYWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFDSDRFYVHS 489 (848)
T ss_dssp ---TEEEEESCBSHHHHHHHSCTTTTSCHHHHHHHHHHHHHHHTTHHHHHHHHHCTTSEEESS
T ss_pred ---cEEEEEccCCCcccccccccccccCccchhhhHHHHHHHHHHHHHHHHHHhCCCCeEEec
Confidence 89999999998531001110 00 22566789999999988887543
|
| >3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A | Back alignment and structure |
|---|
Probab=99.22 E-value=1.7e-10 Score=134.27 Aligned_cols=184 Identities=15% Similarity=0.186 Sum_probs=132.4
Q ss_pred eeEEEecceEEECCEEEEEEEEEeeCC-----CCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHH
Q 009890 25 ANVTYDHRAVVIGGKRRVLISGSIHYP-----RSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVK 99 (523)
Q Consensus 25 ~~vt~d~~~l~idGk~~~l~sG~iHy~-----R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~ 99 (523)
.+|++++..|.|||||+++.+...|.. ..+++.|+.+|+.||++|+|+||+. |-|.. .+
T Consensus 336 R~ie~~~~~f~lNGk~i~lrGvn~h~~~~~G~~~~~e~~~~dl~lmK~~G~N~IR~~-----hyp~~-----------~~ 399 (1010)
T 3bga_A 336 RTSEIKDGRFCINGVPVLVKGTNRHEHSQLGRTVSKELMEQDIRLMKQHNINMVRNS-----HYPTH-----------PY 399 (1010)
T ss_dssp CCEEEETTEEEETTEECCEEEEEECCCBTTBSCCCHHHHHHHHHHHHHTTCCEEEET-----TSCCC-----------HH
T ss_pred eEEEEeCCEEEECCceEEEECcccCCcccccCcCCHHHHHHHHHHHHHCCCCEEEeC-----CCCCC-----------HH
Confidence 458889999999999999999999964 2588999999999999999999993 54432 68
Q ss_pred HHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecc
Q 009890 100 FVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQ 179 (523)
Q Consensus 100 fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~Q 179 (523)
|+++|.++||+|+... |.-| .|+. |- ++ .-.++|.+.++..+-+++++++.+.|| .||+|.
T Consensus 400 ~ydlcDe~Gi~V~~E~-~~~~-----~g~~-~~---~~--~~~~~~~~~~~~~~~~~~mV~r~rNHP-------SIi~Ws 460 (1010)
T 3bga_A 400 WYQLCDRYGLYMIDEA-NIES-----HGMG-YG---PA--SLAKDSTWLTAHMDRTHRMYERSKNHP-------AIVIWS 460 (1010)
T ss_dssp HHHHHHHHTCEEEEEC-SCBC-----GGGC-SS---TT--CTTTCGGGHHHHHHHHHHHHHHHTTCT-------TEEEEE
T ss_pred HHHHHHHCCCEEEEcc-Cccc-----cCcc-cc---CC--cCCCCHHHHHHHHHHHHHHHHHhCCCC-------EEEEEE
Confidence 9999999999999876 3211 1111 10 01 123678898888888888888888665 899999
Q ss_pred ccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEccC-CCCCCccccCCCCccc-----CCCC-CCCCCCCceEee
Q 009890 180 IENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQ-SDAPDPIINTCNGFYC-----DQFT-PNSNNKPKMWTE 252 (523)
Q Consensus 180 IENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~~-~~~p~~vi~~~ng~~~-----~~~~-~~~~~~P~~~tE 252 (523)
+.||.+. + .+++.+.+.+++++-.-|+..... .+. ..+...-.|. +.+. +..+++|.+.+|
T Consensus 461 lgNE~~~-----g----~~~~~l~~~ik~~DptRpV~~~~~~~~~---~~Di~~~~Y~~~~~~~~~~~~~~~~kP~i~sE 528 (1010)
T 3bga_A 461 QGNEAGN-----G----INFERTYDWLKSVEKGRPVQYERAELNY---NTDIYCRMYRSVDEIKAYVGKKDIYRPFILCE 528 (1010)
T ss_dssp CCSSSCC-----S----HHHHHHHHHHHHHCSSSCEECGGGTTSS---SCSSBCCTTCCHHHHHHHHTSTTCCSCEEEEE
T ss_pred CccCcCc-----H----HHHHHHHHHHHHHCCCCcEEeCCCCccc---cccEeeccCCChHHHHhhhhccCCCCcEEEEE
Confidence 9999863 2 367788899999988888765543 111 1111100121 1121 245689999999
Q ss_pred ecc
Q 009890 253 NWS 255 (523)
Q Consensus 253 ~~~ 255 (523)
+..
T Consensus 529 yg~ 531 (1010)
T 3bga_A 529 YLH 531 (1010)
T ss_dssp ESC
T ss_pred ccc
Confidence 964
|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=2.6e-10 Score=113.90 Aligned_cols=156 Identities=15% Similarity=0.162 Sum_probs=116.0
Q ss_pred eeEEEecceEEECCEEEEEEEEEeeCCCC--C-cc-chHHHHHHHHh-CCCCEEEEccccCcCCCCCceee-c---cCcc
Q 009890 25 ANVTYDHRAVVIGGKRRVLISGSIHYPRS--T-PE-MWPDLIQKSKD-GGLDVIETYVFWNLHEPVRNQYN-F---EGRY 95 (523)
Q Consensus 25 ~~vt~d~~~l~idGk~~~l~sG~iHy~R~--~-~~-~W~d~l~k~Ka-~GlN~V~tYvfWn~HEp~~G~yd-F---~G~~ 95 (523)
..|+.+++.|+.||+|+++.+-..|.... . +. .=+++|+.||+ .|+|+||+.+.|. |.+|.|. + +...
T Consensus 3 ~~l~v~g~~i~~nG~~v~l~Gvn~~~~~~~~~~~~~~~~~di~~~~~~~G~N~vRi~~~~~---~~~~~~~~~~p~~~~~ 79 (293)
T 1tvn_A 3 EKLTVSGNQILAGGENTSFAGPSLFWSNTGWGAEKFYTAETVAKAKTEFNATLIRAAIGHG---TSTGGSLNFDWEGNMS 79 (293)
T ss_dssp CCEEEETTEEEETTEECCCEEEEECCCCTTSSCGGGCSHHHHHHHHHHHCCSEEEEEEECC---TTSTTSTTTCHHHHHH
T ss_pred CcEEecCCEEEeCCCEEEEEeeeecccccccCCCCCCCHHHHHHHHHhcCCCEEEEecccc---CCCCCccccChHHHHH
Confidence 35888999999999999999999985431 1 22 23789999994 9999999999884 5445442 1 1234
Q ss_pred hHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCce
Q 009890 96 DLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPI 175 (523)
Q Consensus 96 dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpI 175 (523)
.|+++|+.|.++||+|||-+- . . | + ..+.++..+++++|++++|.++ .|
T Consensus 80 ~ld~~v~~a~~~Gi~vild~h----~---~---~-------~-------~~~~~~~~~~~~~~a~r~~~~p-------~V 128 (293)
T 1tvn_A 80 RLDTVVNAAIAEDMYVIIDFH----S---H---E-------A-------HTDQATAVRFFEDVATKYGQYD-------NV 128 (293)
T ss_dssp HHHHHHHHHHHTTCEEEEEEE----C---S---C-------G-------GGCHHHHHHHHHHHHHHHTTCT-------TE
T ss_pred HHHHHHHHHHHCCCEEEEEcC----C---C---C-------c-------cccHHHHHHHHHHHHHHhCCCC-------eE
Confidence 789999999999999998651 1 1 1 1 1256788889999999888553 68
Q ss_pred EeccccccccccccccCcccHHHHHHHHHHHHhcCCCcceEE
Q 009890 176 ILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVM 217 (523)
Q Consensus 176 I~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~ 217 (523)
| ++|-||..... +...-++|.+.+.+..|+.+.+.|++.
T Consensus 129 ~-~el~NEP~~~~--~~~~~~~~~~~~~~~IR~~d~~~~i~v 167 (293)
T 1tvn_A 129 I-YEIYNEPLQIS--WVNDIKPYAETVIDKIRAIDPDNLIVV 167 (293)
T ss_dssp E-EECCSCCCSCC--TTTTHHHHHHHHHHHHHTTCCSCEEEE
T ss_pred E-EEccCCCCCCc--hHHHHHHHHHHHHHHHHhhCCCCEEEE
Confidence 7 99999987532 222456788999999999988887665
|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.20 E-value=3.8e-10 Score=112.47 Aligned_cols=156 Identities=15% Similarity=0.182 Sum_probs=115.9
Q ss_pred eeEEEecceEEECCEEEEEEEEEeeCCC--CCccc--hHHHHHHHH-hCCCCEEEEccccCcCCCCCceeecc---Ccch
Q 009890 25 ANVTYDHRAVVIGGKRRVLISGSIHYPR--STPEM--WPDLIQKSK-DGGLDVIETYVFWNLHEPVRNQYNFE---GRYD 96 (523)
Q Consensus 25 ~~vt~d~~~l~idGk~~~l~sG~iHy~R--~~~~~--W~d~l~k~K-a~GlN~V~tYvfWn~HEp~~G~ydF~---G~~d 96 (523)
..|+.+++.|+.||+|+++.+-..|..- +..+. -+++|+.|| ++|+|+||+.+.|. + +|.|-.. ....
T Consensus 3 ~~l~v~g~~~~~nG~~~~l~Gvn~~~~~~~~~~~~~~~~~d~~~l~~~~G~N~vR~~~~~~--~--~~~~~~~~~~~~~~ 78 (291)
T 1egz_A 3 EPLSVNGNKIYAGEKAKSFAGNSLFWSNNGWGGEKFYTADTVASLKKDWKSSIVRAAMGVQ--E--SGGYLQDPAGNKAK 78 (291)
T ss_dssp CCEEEETTEEEETTEECCCEEEEEEECCTTSSGGGGCSHHHHHHHHHTTCCCEEEEEEECS--S--TTSTTTCHHHHHHH
T ss_pred CcEEecCCEEEECCCEEEEEEEeecccccccCCCccCCHHHHHHHHHHcCCCEEEEecccc--c--cCCCcCCHHHHHHH
Confidence 4588899999999999999999988432 21122 368999999 89999999999995 2 2222111 1247
Q ss_pred HHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceE
Q 009890 97 LVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPII 176 (523)
Q Consensus 97 L~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII 176 (523)
|+++++.|.++||+|||-+- . .| .+.+.++..+++++|++++|.++ .||
T Consensus 79 ld~~v~~a~~~Gi~vild~h----~------~~--------------~~~~~~~~~~~~~~ia~r~~~~p-------~V~ 127 (291)
T 1egz_A 79 VERVVDAAIANDMYAIIGWH----S------HS--------------AENNRSEAIRFFQEMARKYGNKP-------NVI 127 (291)
T ss_dssp HHHHHHHHHHTTCEEEEEEE----C------SC--------------GGGGHHHHHHHHHHHHHHHTTST-------TEE
T ss_pred HHHHHHHHHHCCCEEEEEcC----C------CC--------------cchhHHHHHHHHHHHHHHhCCCC-------cEE
Confidence 89999999999999999751 1 11 13467888889999999888553 687
Q ss_pred eccccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEc
Q 009890 177 LSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMC 218 (523)
Q Consensus 177 ~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~ 218 (523)
++|-||..... +...-.+|.+.+.+..|+.+.+.|++..
T Consensus 128 -~el~NEP~~~~--~~~~~~~~~~~~~~~IR~~d~~~~i~v~ 166 (291)
T 1egz_A 128 -YEIYNEPLQVS--WSNTIKPYAEAVISAIRAIDPDNLIIVG 166 (291)
T ss_dssp -EECCSCCCSCC--TTTTHHHHHHHHHHHHHHHCSSSCEEEC
T ss_pred -EEecCCCCCCc--hHHHHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 99999997532 2234567888999999999888876653
|
| >3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A | Back alignment and structure |
|---|
Probab=99.19 E-value=8.1e-11 Score=137.09 Aligned_cols=260 Identities=15% Similarity=0.152 Sum_probs=163.9
Q ss_pred eeEEEecceEEECCEEEEEEEEEeeCC-----C-CCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHH
Q 009890 25 ANVTYDHRAVVIGGKRRVLISGSIHYP-----R-STPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLV 98 (523)
Q Consensus 25 ~~vt~d~~~l~idGk~~~l~sG~iHy~-----R-~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~ 98 (523)
.+|++++..|+|||||+++.+...|.. | .+++.|+.+|+.||++|+|+||+ .|-|.. .
T Consensus 338 R~iei~~~~f~lNGkpi~lkGvn~H~~~p~~G~a~~~e~~~~Di~lmK~~g~NaVRt-----sHyp~~-----------~ 401 (1032)
T 3oba_A 338 RQVELKDGNITVNGKDILFRGVNRHDHHPRFGRAVPLDFVVRDLILMKKFNINAVRN-----SHYPNH-----------P 401 (1032)
T ss_dssp CCEEEETTEEEETTEECCEEEEECCCCBTTTBTCCCHHHHHHHHHHHHHTTCCEEEC-----TTSCCC-----------T
T ss_pred EEEEEeCCEEEECCeEEEEeccCcCccCcccCcCCCHHHHHHHHHHHHHcCCcEEEe-----cCCCCh-----------H
Confidence 458889999999999999999999853 2 58899999999999999999999 466654 6
Q ss_pred HHHHHHHHcCCEEEEecCceeccccCCCCCCcccc-------CC---------CCeeeecCChhHHHHHHHHHHHHHHHH
Q 009890 99 KFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH-------FI---------PGIQFRTDNEPFKAEMQRFTAKIVDMM 162 (523)
Q Consensus 99 ~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~-------~~---------p~i~~Rt~d~~fl~~~~~~~~~i~~~i 162 (523)
+|+++|.+.||+|+... |.-| .|+-.|.. .. ++...-.++|.|++++.+-+++++++.
T Consensus 402 ~fydlCDe~Gi~V~dE~-~~e~-----hG~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~~~~mV~Rd 475 (1032)
T 3oba_A 402 KVYDLFDKLGFWVIDEA-DLET-----HGVQEPFNRHTNLEAEYPDTKNKLYDVNAHYLSDNPEYEVAYLDRASQLVLRD 475 (1032)
T ss_dssp THHHHHHHHTCEEEEEC-SCBC-----GGGGHHHHHHTTCCCCCTTTTHHHHTTTGGGTTTCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEcc-cccc-----CCccccccccccccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHh
Confidence 89999999999999875 2222 12211220 00 011122578899999888888888888
Q ss_pred HhcccccccCCceEeccccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEccCCCCC-CccccCCCCccc-----
Q 009890 163 KQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAP-DPIINTCNGFYC----- 236 (523)
Q Consensus 163 k~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~~~~~p-~~vi~~~ng~~~----- 236 (523)
+.|| .||+|.+.||.+. + ..++.+.+.+++++..-|.......+.. ..++.. .|.
T Consensus 476 rNHP-------SIi~WslgNE~~~-----g----~~~~~~~~~~k~~DptRpv~~e~~~~~~~~Di~s~---mY~~~~~i 536 (1032)
T 3oba_A 476 VNHP-------SIIIWSLGNEACY-----G----RNHKAMYKLIKQLDPTRLVHYEGDLNALSADIFSF---MYPTFEIM 536 (1032)
T ss_dssp TTCT-------TEEEEECCBSCCC-----C----HHHHHHHHHHHHHCTTSEEECTTCTTCTTCSSEEE---ESCCHHHH
T ss_pred cCCC-------eEEEEECccCCcc-----c----hhHHHHHHHHHHhCCCCcEEeccCcCcccceeeec---cCCCHHHH
Confidence 8665 8999999999863 2 3567788888888888776433222111 011110 111
Q ss_pred CCCCCCCC------CCCceEeeeccccccccCCCCCCCCHHHHHHHHHHH--Hhc---------C----------Ceeee
Q 009890 237 DQFTPNSN------NKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARF--FQR---------G----------GTFQN 289 (523)
Q Consensus 237 ~~~~~~~~------~~P~~~tE~~~Gwf~~wG~~~~~r~~~d~~~~~~~~--~~~---------g----------~s~~n 289 (523)
..+....+ ++|.|.+|+--+. |.. .-..++.-..+.+. ++- | ... .
T Consensus 537 ~~~~~~~~~~~~~~~kP~i~~Ey~Ham----gn~--~g~l~~yw~~~~~~p~~~GgfiWdw~Dq~~~~~~~~~~~~~G-~ 609 (1032)
T 3oba_A 537 ERWRKNHTDENGKFEKPLILCEYGHAM----GNG--PGSLKEYQELFYKEKFYQGGFIWEWANHGIEFEDVSTADGKL-H 609 (1032)
T ss_dssp HHHHHHHBCTTSCBSSCEEEEEESCCC----SSC--CCCHHHHHHHHHHCTTEEEEEESCSBCCCEEEEEECTTTSSE-E
T ss_pred HHHHhhCcccccccCCCEEEEeccccc----cCC--CCCHHHHHHHHHhCCCeeEEEEEecccccccccccccccCCC-c
Confidence 11111112 7999999996432 211 11233332222211 000 0 011 1
Q ss_pred eeeeccCCCCCCCCCCCcccccccC--CCCCCcCCCCCChhHHHHHHHHHHHH
Q 009890 290 YYMYHGGTNFDRTSGGPFISTSYDY--DAPLDEYGLIRQPKWGHLKDLHKAIK 340 (523)
Q Consensus 290 yYM~hGGTNfG~~~G~~~~~TSYDy--~Api~E~G~~~~pKy~~lk~lh~~i~ 340 (523)
-|+.+|| .||-. .+.+.| +.-+..++.+ .|++.++|.+.+-|+
T Consensus 610 ~~~~YGG-Dfgd~------p~d~nF~~dGlv~~DR~p-~p~~~e~k~v~qpv~ 654 (1032)
T 3oba_A 610 KAYAYGG-DFKEE------VHDGVFIMDGLCNSEHNP-TPGLVEYKKVIEPVH 654 (1032)
T ss_dssp EEEECTT-TTCCS------SCCGGGGCCCSBCTTSCB-CHHHHHHHHHTCSEE
T ss_pred EeEEECC-CCCCC------CCCCCcccCeeECCCCCc-ChhHHHHHHhcCcEE
Confidence 2445565 35522 233344 5677888888 699999998776655
|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=7.8e-10 Score=118.60 Aligned_cols=173 Identities=13% Similarity=0.148 Sum_probs=122.0
Q ss_pred CeeEEEecceEEE----CC--EEEEEEEEEe--eCC--CC----CccchHHHHHHHHhCCCCEEEEccccCcCCCC--Cc
Q 009890 24 GANVTYDHRAVVI----GG--KRRVLISGSI--HYP--RS----TPEMWPDLIQKSKDGGLDVIETYVFWNLHEPV--RN 87 (523)
Q Consensus 24 ~~~vt~d~~~l~i----dG--k~~~l~sG~i--Hy~--R~----~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~--~G 87 (523)
...++.++..|.. || +++.+.+-.. |-+ .. ....+++.++.||+.|+|+||+.+.|...+|. |+
T Consensus 38 ~~~l~v~G~~iv~~~~~~G~~~~v~l~GVN~~G~e~~~~~~~Gl~~~~~~~~i~~ik~~G~N~VRipi~~~~l~~~~~p~ 117 (458)
T 3qho_A 38 GIYYEVRGDTIYMINVTSGEETPIHLFGVNWFGFETPNHVVHGLWKRNWEDMLLQIKSLGFNAIRLPFCTESVKPGTQPI 117 (458)
T ss_dssp SEEEEEETTEEEEEETTTCCEEECCCEEEECCCTTSTTCSCTTTTTSCHHHHHHHHHHTTCCEEEEEEETGGGSTTCCCC
T ss_pred CCeEEEECCEEEEecCCCCCcceEEEEEEecCcccccccccCCCCCCCHHHHHHHHHHcCCCEEEEeeeHHHhCCCCCcc
Confidence 3458999999999 88 9998888874 211 22 23346899999999999999999999987764 23
Q ss_pred eeec---------cCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHH
Q 009890 88 QYNF---------EGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKI 158 (523)
Q Consensus 88 ~ydF---------~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i 158 (523)
..++ +....|+++|+.|+++||+|||-+=-+-+ ...-|.|... +...++..+++++|
T Consensus 118 ~~~~~~np~~~~~~~l~~ld~vV~~a~~~Gi~VIldlH~~~~----~~~~~~W~~~----------~~~~~~~~~~w~~l 183 (458)
T 3qho_A 118 GIDYSKNPDLRGLDSLQIMEKIIKKAGDLGIFVLLDYHRIGC----THIEPLWYTE----------DFSEEDFINTWIEV 183 (458)
T ss_dssp CCCTTTCGGGTTCCHHHHHHHHHHHHHHTTCEEEEEEEESSS----SSCCSSSCBT----------TBCHHHHHHHHHHH
T ss_pred ccccccCccccchHHHHHHHHHHHHHHHCCCEEEEecccCCC----ccCCCccCCc----------hhhHHHHHHHHHHH
Confidence 2221 22347999999999999999987621111 1113556442 12356777888999
Q ss_pred HHHHHhcccccccCCceEeccccccccccc-----------cccC-----cccHHHHHHHHHHHHhcCCCcceEE
Q 009890 159 VDMMKQEKLYASQGGPIILSQIENEYGNID-----------SAYG-----AAGKSYIKWAAGMALSLDTGVPWVM 217 (523)
Q Consensus 159 ~~~ik~~~l~~~~gGpII~~QIENEyg~~~-----------~~~g-----~~~~~y~~~l~~~~~~~g~~vP~~~ 217 (523)
++++|.+ ..||+++|-||..... ..++ ..=+.|++.+.+..|+.+.+.+++.
T Consensus 184 A~ryk~~-------p~Vi~~eL~NEP~~~~~~~~~~~~~~~~~W~~~~~~~~w~~~~~~ai~aIRa~dp~~lIiv 251 (458)
T 3qho_A 184 AKRFGKY-------WNVIGADLKNEPHSVTSPPAAYTDGTGATWGMGNPATDWNLAAERIGKAILKVAPHWLIFV 251 (458)
T ss_dssp HHHHTTS-------TTEEEEECSSCCCCSSCTTGGGTSSSSCBSSSSCTTTBHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHhCCC-------CCEEEEEccCCCCcccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 9998854 3799999999997421 1121 1235789999999999998876654
|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A | Back alignment and structure |
|---|
Probab=99.15 E-value=1.6e-10 Score=118.40 Aligned_cols=161 Identities=16% Similarity=0.107 Sum_probs=116.7
Q ss_pred CeeEEEecceEE-ECCEEEEEEEEEeeCCCC-CccchHHHHHHH-HhCCCCEEEEccccCcCCCCCcee-eccCcchHHH
Q 009890 24 GANVTYDHRAVV-IGGKRRVLISGSIHYPRS-TPEMWPDLIQKS-KDGGLDVIETYVFWNLHEPVRNQY-NFEGRYDLVK 99 (523)
Q Consensus 24 ~~~vt~d~~~l~-idGk~~~l~sG~iHy~R~-~~~~W~d~l~k~-Ka~GlN~V~tYvfWn~HEp~~G~y-dF~G~~dL~~ 99 (523)
...|...+..|+ .||+++++.+.+.|...+ ....=++.++.| |+.|+|+||+.+.|. .+|.+ |-+....|++
T Consensus 34 ~g~l~v~G~~l~d~nG~~v~l~Gvn~h~~~~~~~~~~~~~~~~l~~~~G~N~VRi~~~~~----~~~~~~~~~~~~~ld~ 109 (327)
T 3pzt_A 34 NGQLSIKGTQLVNRDGKAVQLKGISSHGLQWYGEYVNKDSLKWLRDDWGITVFRAAMYTA----DGGYIDNPSVKNKVKE 109 (327)
T ss_dssp CCSCEEETTEEECTTSCBCCCEEEEESCHHHHGGGCSHHHHHHHHHHTCCSEEEEEEESS----TTSTTTCGGGHHHHHH
T ss_pred CCcEEEeCCEEECCCCCEEEEEEEcCCchhhcCCCCCHHHHHHHHHhcCCCEEEEEeEEC----CCCcccCHHHHHHHHH
Confidence 345888999998 699999999999985432 112225678888 689999999998763 12222 3333458999
Q ss_pred HHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecc
Q 009890 100 FVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQ 179 (523)
Q Consensus 100 fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~Q 179 (523)
++++|.++||+|||.+-- ..|| +.+.+.+...+++++|++++|.+ ..|| ++
T Consensus 110 ~v~~a~~~Gi~VilD~H~------~~~~---------------~~~~~~~~~~~~w~~~a~r~k~~-------p~Vi-~e 160 (327)
T 3pzt_A 110 AVEAAKELGIYVIIDWHI------LNDG---------------NPNQNKEKAKEFFKEMSSLYGNT-------PNVI-YE 160 (327)
T ss_dssp HHHHHHHHTCEEEEEEEC------SSSC---------------STTTTHHHHHHHHHHHHHHHTTC-------TTEE-EE
T ss_pred HHHHHHHCCCEEEEEecc------CCCC---------------CchHHHHHHHHHHHHHHHHhCCC-------CcEE-EE
Confidence 999999999999987621 0111 12345677888899999998855 3688 99
Q ss_pred ccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEc
Q 009890 180 IENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMC 218 (523)
Q Consensus 180 IENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~ 218 (523)
|-||..... .+...-+.|++.+.+..|+.+...|++.-
T Consensus 161 l~NEp~~~~-~w~~~~~~~~~~~~~~IR~~dp~~~I~v~ 198 (327)
T 3pzt_A 161 IANEPNGDV-NWKRDIKPYAEEVISVIRKNDPDNIIIVG 198 (327)
T ss_dssp CCSCCCSSC-CTTTTHHHHHHHHHHHHHHHCSSSCEEEC
T ss_pred eccCCCCCc-ccHHHHHHHHHHHHHHHHhhCCCCEEEEe
Confidence 999997421 12335678999999999999998887653
|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=4.1e-10 Score=112.99 Aligned_cols=156 Identities=15% Similarity=0.143 Sum_probs=110.2
Q ss_pred eEEEecceEE-ECCEEEEEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEccc----cCcCCCCCceeeccCcchHHHH
Q 009890 26 NVTYDHRAVV-IGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVF----WNLHEPVRNQYNFEGRYDLVKF 100 (523)
Q Consensus 26 ~vt~d~~~l~-idGk~~~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvf----Wn~HEp~~G~ydF~G~~dL~~f 100 (523)
.++.+++.|+ .||+++++.+...+. .+.++.. +.|+.||++|+|+||+.+. |... +...|+++
T Consensus 3 ~l~v~G~~i~d~nG~~~~l~Gvn~~~-~w~~~~~-~~~~~lk~~G~N~VRi~~~~~~~w~~~----------~~~~ld~~ 70 (302)
T 1bqc_A 3 GLHVKNGRLYEANGQEFIIRGVSHPH-NWYPQHT-QAFADIKSHGANTVRVVLSNGVRWSKN----------GPSDVANV 70 (302)
T ss_dssp CSEEETTEEECTTSCBCCCEEEEECT-TTCTTCT-THHHHHHHTTCSEEEEEECCSSSSCCC----------CHHHHHHH
T ss_pred ceEEeCCEEECCCCCEEEEEEeeccc-ccCcchH-HHHHHHHHcCCCEEEEEccCCcccCCC----------CHHHHHHH
Confidence 4677888887 799999988877621 2222322 7899999999999999985 4321 22479999
Q ss_pred HHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccc
Q 009890 101 VKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQI 180 (523)
Q Consensus 101 l~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QI 180 (523)
|+.|+++||+|||..- .....++ + +++...++..+++++|++++|.+ .+||+++|
T Consensus 71 v~~a~~~Gi~Vild~h----~~~~~~~--------~------~~~~~~~~~~~~w~~ia~~~k~~-------~~vv~~el 125 (302)
T 1bqc_A 71 ISLCKQNRLICMLEVH----DTTGYGE--------Q------SGASTLDQAVDYWIELKSVLQGE-------EDYVLINI 125 (302)
T ss_dssp HHHHHHTTCEEEEEEG----GGTTTTT--------S------TTCCCHHHHHHHHHHTHHHHTTC-------TTTEEEEC
T ss_pred HHHHHHCCCEEEEEec----cCCCCCC--------C------CchhhHHHHHHHHHHHHHHhcCC-------CCEEEEEe
Confidence 9999999999999862 2111111 0 23456788888999999988854 37899999
Q ss_pred cccccccccccCcccHHHHHHHHHHHHhcCCCcceEEc
Q 009890 181 ENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMC 218 (523)
Q Consensus 181 ENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~ 218 (523)
-||.......-...-..|++.+.+..|+.+...|++.-
T Consensus 126 ~NEP~~~~~~~~~~w~~~~~~~~~~IR~~dp~~~i~v~ 163 (302)
T 1bqc_A 126 GNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVD 163 (302)
T ss_dssp SSSCCCSCHHHHTTHHHHHHHHHHHHHHTTCCSCEEEE
T ss_pred CCCCCCCCCcchhhHHHHHHHHHHHHHhcCCCcEEEEC
Confidence 99985421100011246788888888999888877654
|
| >1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.09 E-value=5.3e-11 Score=123.24 Aligned_cols=155 Identities=15% Similarity=0.270 Sum_probs=120.5
Q ss_pred EEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEE--ccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCcee
Q 009890 42 VLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIET--YVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYV 119 (523)
Q Consensus 42 ~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~t--YvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi 119 (523)
++++++++...++.+ ....+.|.+.++|.|.. -+-|...||+||+|||+ .++++++.|+++||.|+..+ -+
T Consensus 37 ~~~G~a~~~~~~~~~--~~~~~~~~~~~fn~vt~en~~kW~~~ep~~g~~~f~---~~D~~v~~a~~~gi~v~ght--lv 109 (347)
T 1xyz_A 37 IKIGTCVNYPFYNNS--DPTYNSILQREFSMVVCENEMKFDALQPRQNVFDFS---KGDQLLAFAERNGMQMRGHT--LI 109 (347)
T ss_dssp CEEEEEECTHHHHTC--CHHHHHHHHHHCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHTTCEEEEEE--EE
T ss_pred CEEEEEcCHHHcCcc--hHHHHHHHHhcCCEEEECCcccHHHhcCCCCcCChH---HHHHHHHHHHHCCCEEEEEe--ee
Confidence 478999876332221 25788888999999999 67799999999999998 89999999999999987554 11
Q ss_pred ccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccc-c------C
Q 009890 120 CAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSA-Y------G 192 (523)
Q Consensus 120 ~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~-~------g 192 (523)
|. ...|.|+... .-+.+.++++++++++.++.+++ |-|++|+|-||..+.... + .
T Consensus 110 ---W~-~q~P~W~~~~-----~~~~~~~~~~~~~~i~~v~~ry~---------g~v~~WdV~NE~~~~~g~~~r~s~~~~ 171 (347)
T 1xyz_A 110 ---WH-NQNPSWLTNG-----NWNRDSLLAVMKNHITTVMTHYK---------GKIVEWDVANECMDDSGNGLRSSIWRN 171 (347)
T ss_dssp ---CS-SSCCHHHHTS-----CCCHHHHHHHHHHHHHHHHHHTT---------TTCSEEEEEESCBCTTSSSBCCCHHHH
T ss_pred ---cc-ccCcHHHhcC-----CCCHHHHHHHHHHHHHHHHHHhC---------CeeEEEEeecccccCCCcccccChHHH
Confidence 32 2579999752 12567899999999999998887 349999999999763211 1 1
Q ss_pred cccHHHHHHHHHHHHhcCCCcceEEccCC
Q 009890 193 AAGKSYIKWAAGMALSLDTGVPWVMCQQS 221 (523)
Q Consensus 193 ~~~~~y~~~l~~~~~~~g~~vP~~~~~~~ 221 (523)
..+.+|++.+-+.|++.+-+.+++.++..
T Consensus 172 ~~G~~~i~~af~~Ar~~dP~a~L~~Ndyn 200 (347)
T 1xyz_A 172 VIGQDYLDYAFRYAREADPDALLFYNDYN 200 (347)
T ss_dssp HHCTTHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred hcCHHHHHHHHHHHHhhCCCCEEEeccCc
Confidence 13468999999999999999999988753
|
| >1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.2e-10 Score=117.93 Aligned_cols=150 Identities=16% Similarity=0.256 Sum_probs=116.9
Q ss_pred EEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEE--ccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCcee
Q 009890 42 VLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIET--YVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYV 119 (523)
Q Consensus 42 ~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~t--YvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi 119 (523)
+++++.++..+.+ ....+.+.+.++|.|.. -+-|...||+||+|||+ .++++++.|+++||.|...+ -+
T Consensus 13 ~~~G~a~~~~~~~----~~~~~~~~~~~fn~~t~en~~kW~~~ep~~g~~~~~---~~D~~v~~a~~~gi~v~gh~--lv 83 (302)
T 1nq6_A 13 RYFGAAVAANHLG----EAAYASTLDAQFGSVTPENEMKWDAVESSRNSFSFS---AADRIVSHAQSKGMKVRGHT--LV 83 (302)
T ss_dssp CEEEEEECGGGTT----SHHHHHHHHHHCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHHTCEEEEEE--EE
T ss_pred CEEEEEcChhhcC----CHHHHHHHHhcCCeEEEcCceeeccccCCCCcCCcH---HHHHHHHHHHHCCCEEEEEe--cc
Confidence 4678888765554 35677788889999998 57799999999999998 89999999999999986433 11
Q ss_pred ccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccc--cc------c
Q 009890 120 CAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNID--SA------Y 191 (523)
Q Consensus 120 ~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~--~~------~ 191 (523)
|. ...|.|+... +++.++++++++++.++.+++ |.|++|+|-||..+.. .. +
T Consensus 84 ---W~-~~~P~W~~~~-------~~~~~~~~~~~~i~~v~~ry~---------g~v~~WdV~NE~~~~~~~g~~r~s~~~ 143 (302)
T 1nq6_A 84 ---WH-SQLPGWVSPL-------AATDLRSAMNNHITQVMTHYK---------GKIHSWDVVNEAFQDGGSGARRSSPFQ 143 (302)
T ss_dssp ---ES-TTCCTTTTTS-------CHHHHHHHHHHHHHHHHHHTT---------TSCSEEEEEECCBCSSSCCCBCCCHHH
T ss_pred ---cC-CCCChhhhcC-------CHHHHHHHHHHHHHHHHHHcC---------CceEEEEeecCccccCCCCccccCHHH
Confidence 32 3589999631 567889999999999988877 3699999999987642 10 1
Q ss_pred CcccHHHHHHHHHHHHhcCCCcceEEccC
Q 009890 192 GAAGKSYIKWAAGMALSLDTGVPWVMCQQ 220 (523)
Q Consensus 192 g~~~~~y~~~l~~~~~~~g~~vP~~~~~~ 220 (523)
...+.+|+..+-+.|++..-+.+++.++-
T Consensus 144 ~~~g~~~~~~af~~Ar~~dP~a~L~~Ndy 172 (302)
T 1nq6_A 144 DKLGNGFIEEAFRTARTVDADAKLCYNDY 172 (302)
T ss_dssp HHHCTTHHHHHHHHHHHHCTTSEEEEEES
T ss_pred HhcCHHHHHHHHHHHHHhCCCCEEEeccc
Confidence 11245799999999999999989888764
|
| >3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=8.9e-11 Score=119.72 Aligned_cols=150 Identities=17% Similarity=0.256 Sum_probs=118.4
Q ss_pred EEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEE--ccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCcee
Q 009890 42 VLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIET--YVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYV 119 (523)
Q Consensus 42 ~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~t--YvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi 119 (523)
+++++.++..+++ ....+.+.+.++|.|.. -+-|...||+||+|||+ .++++++.|+++||.|...+ + +
T Consensus 13 ~~~G~a~~~~~~~----~~~~~~~~~~~fn~~t~en~~kW~~~ep~~g~~~~~---~~D~~~~~a~~~gi~v~ght-l-~ 83 (315)
T 3cui_A 13 RDFGFALDPNRLS----EAQYKAIADSEFNLVVAENAMKWDATEPSQNSFSFG---AGDRVASYAADTGKELYGHT-L-V 83 (315)
T ss_dssp CEEEEEECGGGGG----SHHHHHHHHHHCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHHTCEEEEEE-E-E
T ss_pred CeEEEEcChhhcC----CHHHHHHHHhcCCEEEECCcccHHHhCCCCCcCChH---HHHHHHHHHHHCCCEEEEEe-e-e
Confidence 5678888765443 35677888899999999 67799999999999998 89999999999999986554 1 1
Q ss_pred ccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccc-ccc------C
Q 009890 120 CAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNID-SAY------G 192 (523)
Q Consensus 120 ~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~-~~~------g 192 (523)
|. ...|.|+... +.+.++++++++++.++.+++ |.|++|||-||..+.. ..+ .
T Consensus 84 ---W~-~~~P~W~~~~-------~~~~~~~~~~~~i~~v~~ry~---------g~v~~WdV~NE~~~~~~g~~r~~~~~~ 143 (315)
T 3cui_A 84 ---WH-SQLPDWAKNL-------NGSAFESAMVNHVTKVADHFE---------GKVASWDVVNEAFADGGGRRQDSAFQQ 143 (315)
T ss_dssp ---ES-SSCCHHHHTC-------CHHHHHHHHHHHHHHHHHHHT---------TTCCEEEEEECCBCTTSSBCSSCHHHH
T ss_pred ---cC-CCCCHHHhcC-------CHHHHHHHHHHHHHHHHHHcC---------CceEEEEeecccccCCCCccccchHHH
Confidence 32 2489999531 557899999999999999887 2599999999997643 111 1
Q ss_pred cccHHHHHHHHHHHHhcCCCcceEEccC
Q 009890 193 AAGKSYIKWAAGMALSLDTGVPWVMCQQ 220 (523)
Q Consensus 193 ~~~~~y~~~l~~~~~~~g~~vP~~~~~~ 220 (523)
..+.+|++.+-+.|++.+.+.+++.++-
T Consensus 144 ~~g~~~i~~af~~Ar~~dP~a~l~~ndy 171 (315)
T 3cui_A 144 KLGNGYIETAFRAARAADPTAKLCINDY 171 (315)
T ss_dssp HHCTTHHHHHHHHHHHHCSSSEEEEEES
T ss_pred hccHHHHHHHHHHHHhhCCCCEEEECCc
Confidence 1346899999999999999999888764
|
| >2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=3.9e-09 Score=123.30 Aligned_cols=154 Identities=12% Similarity=0.076 Sum_probs=108.6
Q ss_pred eeEEE-----ecceEEECCEEEEEEEEEeeC---CCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcch
Q 009890 25 ANVTY-----DHRAVVIGGKRRVLISGSIHY---PRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYD 96 (523)
Q Consensus 25 ~~vt~-----d~~~l~idGk~~~l~sG~iHy---~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~d 96 (523)
.+|++ .+..|.|||||+++.+...|+ .|.+++.++.+|+.||++|+|+||+ .|-|.+
T Consensus 335 R~i~~~~~~~~~~~f~lNG~pi~l~G~n~~pd~~~~~~~e~~~~dl~~~k~~g~N~iR~-----~h~~~~---------- 399 (1032)
T 2vzs_A 335 RDVKATLNSSGGRQYSVNGKPLLIRGGGYTPDLFLRWNETAAADKLKYVLNLGLNTVRL-----EGHIEP---------- 399 (1032)
T ss_dssp CCEEEEECTTSCEEEEETTEEECEEEEECCCCTTCCCCHHHHHHHHHHHHHTTCCEEEE-----ESCCCC----------
T ss_pred EEEEEEEccCCCceEEECCEEEEEeccccCccccccCCHHHHHHHHHHHHHcCCCEEEC-----CCCCCc----------
Confidence 45677 368999999999999999986 2468999999999999999999999 566644
Q ss_pred HHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceE
Q 009890 97 LVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPII 176 (523)
Q Consensus 97 L~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII 176 (523)
++|+++|.+.||+|+-.. |. |+.|..+ ...+ .....-.|...+...+-+++++++.+.| ..||
T Consensus 400 -~~fydlcDelGilVw~e~-~~-~~~w~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~V~R~rNH-------PSIi 462 (1032)
T 2vzs_A 400 -DEFFDIADDLGVLTMPGW-EC-CDKWEGQ------VNGE-EKGEPWVESDYPIAKASMFSEAERLRDH-------PSVI 462 (1032)
T ss_dssp -HHHHHHHHHHTCEEEEEC-CS-SSGGGTT------TSTT-SSSCCCCTTHHHHHHHHHHHHHHHHTTC-------TTBC
T ss_pred -HHHHHHHHHCCCEEEEcc-cc-ccccccc------CCCC-CcccccChhHHHHHHHHHHHHHHHhcCC-------CeEE
Confidence 899999999999999875 33 3445321 0000 0000012333344444455556666655 5899
Q ss_pred eccccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEc
Q 009890 177 LSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMC 218 (523)
Q Consensus 177 ~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~ 218 (523)
+|-+.||-.. +..+.+.+.+.+++++-..|+...
T Consensus 463 ~Ws~gNE~~~--------~~~~~~~~~~~~k~~DptRpv~~~ 496 (1032)
T 2vzs_A 463 SFHIGSDFAP--------DRRIEQGYLDAMKAADFLLPVIPA 496 (1032)
T ss_dssp CEESCSSSCC--------CHHHHHHHHHHHHHTTCCSCEESC
T ss_pred EEEeccCCCc--------hHHHHHHHHHHHHHhCCCCeEEec
Confidence 9999999742 345666677788888888887654
|
| >1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=8.1e-11 Score=123.38 Aligned_cols=159 Identities=16% Similarity=0.173 Sum_probs=121.8
Q ss_pred EEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEE--ccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCcee
Q 009890 42 VLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIET--YVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYV 119 (523)
Q Consensus 42 ~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~t--YvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi 119 (523)
+++++.++...++.+ |+...+.+ +.++|.|.. -+-|...||+||+|||+ .++++++.|+++||.|...+ .+
T Consensus 35 f~~G~a~~~~~~~~~-~~~~~~l~-~~~fn~vt~eN~~kW~~~ep~~G~~~f~---~~D~~v~~a~~~gi~vrgHt--lv 107 (378)
T 1ur1_A 35 FLIGAALNATIASGA-DERLNTLI-AKEFNSITPENCMKWGVLRDAQGQWNWK---DADAFVAFGTKHNLHMVGHT--LV 107 (378)
T ss_dssp CEEEEEECHHHHTTC-CHHHHHHH-HHHCSEEEESSTTSHHHHBCTTCCBCCH---HHHHHHHHHHHTTCEEEEEE--EE
T ss_pred CEEEEEeCHHHhCcC-CHHHHHHH-HccCCeEEECCcccHHHhcCCCCccCch---HHHHHHHHHHHCCCEEEeec--cc
Confidence 678988876554332 56666666 559999999 57799999999999998 89999999999999986433 11
Q ss_pred ccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccc------cCc
Q 009890 120 CAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSA------YGA 193 (523)
Q Consensus 120 ~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~------~g~ 193 (523)
|. ...|.|+...++- -..+.+.++++++++++.++.+.+ |.|.+|+|-||..+.... +..
T Consensus 108 ---W~-~q~P~W~~~d~~g-~~~~~~~~~~~~~~~I~~v~~rY~---------g~i~~wdv~NE~~~~~g~~r~s~~~~~ 173 (378)
T 1ur1_A 108 ---WH-SQIHDEVFKNADG-SYISKAALQKKMEEHITTLAGRYK---------GKLAAWDVVNEAVGDDLKMRDSHWYKI 173 (378)
T ss_dssp ---CS-SSSCGGGTBCTTS-CBCCHHHHHHHHHHHHHHHHHHTT---------TTCSEEEEEECCBCTTSSBCCCHHHHH
T ss_pred ---cc-ccCchhhhcCCCC-CCCCHHHHHHHHHHHHHHHHHHhC---------CcceEEEeecccccCCCCccCChhhhh
Confidence 32 2489999864421 123557889999999999998877 479999999998763211 112
Q ss_pred ccHHHHHHHHHHHHhcCCCcceEEccCC
Q 009890 194 AGKSYIKWAAGMALSLDTGVPWVMCQQS 221 (523)
Q Consensus 194 ~~~~y~~~l~~~~~~~g~~vP~~~~~~~ 221 (523)
-|.+|+..+-+.|++.+.+..++.++-.
T Consensus 174 lG~d~i~~af~~Ar~~dP~a~L~~Ndyn 201 (378)
T 1ur1_A 174 MGDDFIYNAFTLANEVDPKAHLMYNDYN 201 (378)
T ss_dssp HTTHHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred ccHHHHHHHHHHHHHhCCCCEEEecccc
Confidence 3578999999999999999999988753
|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} | Back alignment and structure |
|---|
Probab=99.06 E-value=1e-09 Score=113.67 Aligned_cols=157 Identities=11% Similarity=0.062 Sum_probs=115.6
Q ss_pred eeEEEecceEE-ECCEEEEEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHH
Q 009890 25 ANVTYDHRAVV-IGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKL 103 (523)
Q Consensus 25 ~~vt~d~~~l~-idGk~~~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~l 103 (523)
..++.++..|. .||+++++.+-+ |-.-+-++...+.|+.||+.|+|+||+++.. .|.|+-+....|+++|+.
T Consensus 23 ~~l~V~G~~l~d~nG~~~~lrGvn-~~~~~~~~~~~~~i~~lk~~G~N~VRip~~~------~~~~~~~~l~~ld~~v~~ 95 (345)
T 3jug_A 23 SGFYVDGNTLYDANGQPFVMKGIN-HGHAWYKDTASTAIPAIAEQGANTIRIVLSD------GGQWEKDDIDTVREVIEL 95 (345)
T ss_dssp CCCEEETTEEECTTSCBCCCEEEE-ECGGGCGGGHHHHHHHHHHTTCSEEEEEECC------SSSSCCCCHHHHHHHHHH
T ss_pred CCeEEECCEEEccCCCEEEEeccc-ccccccChHHHHHHHHHHHcCCCEEEEEecC------CCccCHHHHHHHHHHHHH
Confidence 45999999998 899999999887 6322334445789999999999999999842 355655555689999999
Q ss_pred HHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccc
Q 009890 104 VAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENE 183 (523)
Q Consensus 104 a~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENE 183 (523)
|.++||||||.+--+ ++ .++...++...+++++|++++|.++ ++|++.|-||
T Consensus 96 a~~~GiyVIlDlH~~-----------------~g----~~~~~~~~~~~~~w~~iA~ryk~~~-------~~Vi~el~NE 147 (345)
T 3jug_A 96 AEQNKMVAVVEVHDA-----------------TG----RDSRSDLDRAVDYWIEMKDALIGKE-------DTVIINIANE 147 (345)
T ss_dssp HHTTTCEEEEEECTT-----------------TT----CCCHHHHHHHHHHHHHTHHHHTTCT-------TTEEEECCTT
T ss_pred HHHCCCEEEEEeccC-----------------CC----CCcHHHHHHHHHHHHHHHHHHcCCC-------CeEEEEecCC
Confidence 999999999987311 11 1233467888889999999998542 4556999999
Q ss_pred ccccccccC-cccHHHHHHHHHHHHhcCCCcceEEcc
Q 009890 184 YGNIDSAYG-AAGKSYIKWAAGMALSLDTGVPWVMCQ 219 (523)
Q Consensus 184 yg~~~~~~g-~~~~~y~~~l~~~~~~~g~~vP~~~~~ 219 (523)
.... .. ..-.++++.+.+..|+.+.+.|++...
T Consensus 148 P~~~---~~~~~w~~~~~~~i~~IR~~dp~~~Iiv~g 181 (345)
T 3jug_A 148 WYGS---WDGAAWADGYIDVIPKLRDAGLTHTLMVDA 181 (345)
T ss_dssp CCCS---SCHHHHHHHHHHHHHHHHHTTCCSCEEEEC
T ss_pred CCCC---CCHHHHHHHHHHHHHHHHhhCCCCEEEEeC
Confidence 8651 11 111356677888889999888777653
|
| >1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A | Back alignment and structure |
|---|
Probab=99.03 E-value=2.1e-10 Score=116.63 Aligned_cols=151 Identities=20% Similarity=0.297 Sum_probs=115.7
Q ss_pred EEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEE--ccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCcee
Q 009890 42 VLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIET--YVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYV 119 (523)
Q Consensus 42 ~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~t--YvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi 119 (523)
++++++++..+++.+...+ .| +.++|.|.. -+-|...||+||+|||+ .++++++.|+++||.|...+ -+
T Consensus 16 ~~~G~a~~~~~~~~~~~~~---~~-~~~fn~vt~en~~kW~~~ep~~g~~~f~---~~D~~v~~a~~~gi~v~ght--l~ 86 (303)
T 1i1w_A 16 VYFGVATDQNRLTTGKNAA---II-QANFGQVTPENSMKWDATEPSQGNFNFA---GADYLVNWAQQNGKLIRGHT--LV 86 (303)
T ss_dssp SEEEEEECHHHHTSTTHHH---HH-HHHCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHHTCEEEEEE--EE
T ss_pred CEEEEEcChhhcCCHHHHH---HH-HhhCCEEEECccccHHHhCCCCCccChh---hHHHHHHHHHHCCCEEEEee--cc
Confidence 4688888865554443333 33 669999998 57799999999999998 89999999999999986543 11
Q ss_pred ccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccccccc------Cc
Q 009890 120 CAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAY------GA 193 (523)
Q Consensus 120 ~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~------g~ 193 (523)
|. ...|.|+...+ +.+.++++++++++.++.+++ |.|++|+|-||..+....+ ..
T Consensus 87 ---W~-~q~P~W~~~~~------~~~~~~~~~~~~i~~v~~ry~---------g~v~~WdV~NE~~~~~g~~r~s~~~~~ 147 (303)
T 1i1w_A 87 ---WH-SQLPSWVSSIT------DKNTLTNVMKNHITTLMTRYK---------GKIRAWDVVNEAFNEDGSLRQTVFLNV 147 (303)
T ss_dssp ---CS-TTCCHHHHTCC------CHHHHHHHHHHHHHHHHHHTT---------TSCSEEEEEESCBCTTSSBCCCHHHHH
T ss_pred ---cc-CCCChHHhcCC------CHHHHHHHHHHHHHHHHHhcC---------CceeEEEeecCccCCCCCcccchHHHh
Confidence 43 35899997532 335688999999999998887 3599999999997532111 12
Q ss_pred ccHHHHHHHHHHHHhcCCCcceEEccC
Q 009890 194 AGKSYIKWAAGMALSLDTGVPWVMCQQ 220 (523)
Q Consensus 194 ~~~~y~~~l~~~~~~~g~~vP~~~~~~ 220 (523)
.+.+|++.+-+.|++.+.+.++++++-
T Consensus 148 ~g~~~i~~af~~Ar~~dP~a~L~~Ndy 174 (303)
T 1i1w_A 148 IGEDYIPIAFQTARAADPNAKLYINDY 174 (303)
T ss_dssp TCTTHHHHHHHHHHHHCTTSEEEEEES
T ss_pred cCHHHHHHHHHHHHHHCCCCeEEeccc
Confidence 356899999999999999999998864
|
| >1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A | Back alignment and structure |
|---|
Probab=98.99 E-value=5.1e-10 Score=115.12 Aligned_cols=155 Identities=14% Similarity=0.146 Sum_probs=118.9
Q ss_pred EEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEE--ccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCcee
Q 009890 42 VLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIET--YVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYV 119 (523)
Q Consensus 42 ~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~t--YvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi 119 (523)
+++++++++.+ |+...+.+ +.++|.|.. -+-|...||+||+|||+ .++++++.|+++||.|...+ -+
T Consensus 16 ~~~G~a~~~~~-----~~~~~~~~-~~~fn~vt~eN~~kW~~~ep~~g~~~f~---~~D~~v~~a~~~gi~v~ght--lv 84 (331)
T 1n82_A 16 FRIGAAVNPVT-----IEMQKQLL-IDHVNSITAENHMKFEHLQPEEGKFTFQ---EADRIVDFACSHRMAVRGHT--LV 84 (331)
T ss_dssp CEEEEEECHHH-----HHHTHHHH-HHHCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHTTCEEEEEE--EE
T ss_pred CEEEEEcChhh-----CHHHHHHH-HhcCCEEEECCcccHHHhCCCCCccChH---HHHHHHHHHHHCCCEEEEEe--ee
Confidence 67888887533 66666666 569999999 57799999999999998 89999999999999986443 11
Q ss_pred ccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccc--c------
Q 009890 120 CAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSA--Y------ 191 (523)
Q Consensus 120 ~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~--~------ 191 (523)
|. ...|.|+...++- -..+.+.++++++++++.++.+++ |.|++|+|-||..+.... +
T Consensus 85 ---W~-~q~P~W~~~~~~g-~~~~~~~~~~~~~~~i~~v~~rY~---------g~v~~wdv~NE~~~~~g~~~~r~s~~~ 150 (331)
T 1n82_A 85 ---WH-NQTPDWVFQDGQG-HFVSRDVLLERMKCHISTVVRRYK---------GKIYCWDVINEAVADEGDELLRPSKWR 150 (331)
T ss_dssp ---ES-SSCCGGGGBCSSS-SBCCHHHHHHHHHHHHHHHHHHHT---------TTCCEEEEEESCBCSSSSCSBCCCHHH
T ss_pred ---cC-CCCChhhccCCCC-CCCCHHHHHHHHHHHHHHHHHHhc---------CCceEEeeecccccCCCccccccchHH
Confidence 32 3589999864321 123557899999999999999887 379999999999753211 1
Q ss_pred CcccHHHHHHHHHHHHhcCCCcceEEccCC
Q 009890 192 GAAGKSYIKWAAGMALSLDTGVPWVMCQQS 221 (523)
Q Consensus 192 g~~~~~y~~~l~~~~~~~g~~vP~~~~~~~ 221 (523)
...+.+|++.+-+.|++.+.+..++.++-.
T Consensus 151 ~~~g~~~i~~af~~Ar~~dP~a~L~~Ndyn 180 (331)
T 1n82_A 151 QIIGDDFMEQAFLYAYEADPDALLFYNDYN 180 (331)
T ss_dssp HHHCTTHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred HhcCHHHHHHHHHHHHHHCCCCEEEEeccc
Confidence 123568999999999999999888887743
|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A | Back alignment and structure |
|---|
Probab=98.99 E-value=2e-09 Score=108.50 Aligned_cols=160 Identities=14% Similarity=0.162 Sum_probs=113.4
Q ss_pred eEEEecceEE-ECCEEEEEEEEEeeCCCCCccc-hHHHHHHHH-hCCCCEEEEccccCcCCCCCcee-eccCcchHHHHH
Q 009890 26 NVTYDHRAVV-IGGKRRVLISGSIHYPRSTPEM-WPDLIQKSK-DGGLDVIETYVFWNLHEPVRNQY-NFEGRYDLVKFV 101 (523)
Q Consensus 26 ~vt~d~~~l~-idGk~~~l~sG~iHy~R~~~~~-W~d~l~k~K-a~GlN~V~tYvfWn~HEp~~G~y-dF~G~~dL~~fl 101 (523)
.+..++..|. .||+++++.+-+.|-.-+.+.. =++.++.|| ++|+|+||+.+.|. .+|.. |=+....|+++|
T Consensus 11 ~l~v~G~~l~d~nG~~v~lrGvn~~~~~~~~~~~~~~~~~~l~~~~G~N~VRip~~~~----~~~~~~~~~~~~~ld~~v 86 (303)
T 7a3h_A 11 QLSISNGELVNERGEQVQLKGMSSHGLQWYGQFVNYESMKWLRDDWGINVFRAAMYTS----SGGYIDDPSVKEKVKEAV 86 (303)
T ss_dssp SCEEETTEEECTTSCBCCCEEEEESCHHHHGGGCSHHHHHHHHHHTCCCEEEEEEESS----TTSTTTCTTHHHHHHHHH
T ss_pred eEEEeCCEEECCCCCEEEEEEeccCccccccccCCHHHHHHHHHhcCCCEEEEEEEeC----CCCccCCHHHHHHHHHHH
Confidence 4777888888 6999999999998842221222 256788887 79999999999883 11211 212234799999
Q ss_pred HHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccc
Q 009890 102 KLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIE 181 (523)
Q Consensus 102 ~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIE 181 (523)
+.|.++||+|||-+-- . | + .+...+.+...+++++|++++|.++ .|| +.|-
T Consensus 87 ~~a~~~Gi~Vild~H~-------~---~-------~----~~~~~~~~~~~~~w~~ia~r~~~~~-------~Vi-~el~ 137 (303)
T 7a3h_A 87 EAAIDLDIYVIIDWHI-------L---S-------D----NDPNIYKEEAKDFFDEMSELYGDYP-------NVI-YEIA 137 (303)
T ss_dssp HHHHHHTCEEEEEEEC-------S---S-------S----CSTTTTHHHHHHHHHHHHHHHTTCT-------TEE-EECC
T ss_pred HHHHHCCCEEEEEecc-------c---C-------C----CCchHHHHHHHHHHHHHHHHhCCCC-------eEE-EEec
Confidence 9999999999987621 1 1 1 0112456777888999999988553 688 9999
Q ss_pred ccccccccccCcccHHHHHHHHHHHHhcCCCcceEEc
Q 009890 182 NEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMC 218 (523)
Q Consensus 182 NEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~ 218 (523)
||.......+...-+.|++.+.+..|+.+...|++..
T Consensus 138 NEP~~~~~~w~~~~~~~~~~~~~~IR~~dp~~~I~v~ 174 (303)
T 7a3h_A 138 NEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVG 174 (303)
T ss_dssp SCCCSTTCCTTTTHHHHHHHHHHHHHTTCSSSCEEEC
T ss_pred cCCCCCCcChHHHHHHHHHHHHHHHHhhCCCCEEEEe
Confidence 9987532222234568899999999999998887653
|
| >2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} | Back alignment and structure |
|---|
Probab=98.97 E-value=6.1e-10 Score=115.76 Aligned_cols=156 Identities=14% Similarity=0.224 Sum_probs=116.8
Q ss_pred EEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEE--ccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCcee
Q 009890 42 VLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIET--YVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYV 119 (523)
Q Consensus 42 ~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~t--YvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi 119 (523)
+++++++++.++++ +..+.| +.++|.|.. -+-|...||+||+|||+ .++++++.|+++||.|...+ -+
T Consensus 16 f~~G~a~~~~~~~~----~~~~l~-~~~fn~vt~en~~kW~~~ep~~g~~~f~---~~D~~v~~a~~~gi~v~ght--lv 85 (356)
T 2dep_A 16 FPIGAAIEPGYTTG----QIAELY-KKHVNMLVAENAMKPASLQPTEGNFQWA---DADRIVQFAKENGMELRFHT--LV 85 (356)
T ss_dssp CCEEEEECGGGSSH----HHHHHH-HHHCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHTTCEEEEEE--EE
T ss_pred CEEEEEcchhhcCH----HHHHHH-HhhCCEEEECCcccHHHhcCCCCccCch---HHHHHHHHHHHCCCEEEEee--cc
Confidence 57888887655532 233334 679999998 56799999999999998 89999999999999987554 11
Q ss_pred ccccCCCCCCccccCCC-Ceee---------ecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccc-
Q 009890 120 CAEWNFGGFPLWLHFIP-GIQF---------RTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNID- 188 (523)
Q Consensus 120 ~aEw~~GG~P~WL~~~p-~i~~---------Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~- 188 (523)
|. ...|.|+...+ +... ..+.+.++++++++++.++.+++ |.|.+|+|-||..+..
T Consensus 86 ---W~-~q~P~W~~~~~~g~~~~~g~r~~~~~~~~~~~~~~~~~~i~~v~~rY~---------g~v~~wdv~NE~~~~~~ 152 (356)
T 2dep_A 86 ---WH-NQTPDWFFLDKEGKPMVEETDPQKREENRKLLLQRLENYIRAVVLRYK---------DDIKSWDVVNEVIEPND 152 (356)
T ss_dssp ---ES-SSCCGGGGBCTTSSBGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHT---------TTCCEEEEEECCBCTTS
T ss_pred ---cc-ccCchhhhccCcCCccccccccccCCCCHHHHHHHHHHHHHHHHHHhC---------CceeEEEeecccccCCC
Confidence 43 46899997532 2100 12345688999999999998887 3699999999986532
Q ss_pred -ccc------CcccHHHHHHHHHHHHh-cCCCcceEEccC
Q 009890 189 -SAY------GAAGKSYIKWAAGMALS-LDTGVPWVMCQQ 220 (523)
Q Consensus 189 -~~~------g~~~~~y~~~l~~~~~~-~g~~vP~~~~~~ 220 (523)
..+ ...|.+|+..+-+.|++ .+-+..++.++-
T Consensus 153 ~g~~r~s~~~~~~G~~~i~~af~~Ar~~~dP~a~L~~Ndy 192 (356)
T 2dep_A 153 PGGMRNSPWYQITGTEYIEVAFRATREAGGSDIKLYINDY 192 (356)
T ss_dssp GGGBCCCHHHHHHTTHHHHHHHHHHHHHHCSSSEEEEEES
T ss_pred CCCccCChHHHhccHHHHHHHHHHHHHhcCCCcEEEeccc
Confidence 111 12356899999999999 999999998874
|
| >1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=98.95 E-value=4.9e-10 Score=114.02 Aligned_cols=151 Identities=17% Similarity=0.262 Sum_probs=114.3
Q ss_pred EEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEE--ccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCcee
Q 009890 42 VLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIET--YVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYV 119 (523)
Q Consensus 42 ~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~t--YvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi 119 (523)
++++++++..+++.+.. .+.+ +.++|.|.. -+-|...||+||+|||+ .++++++.|+++||.|...+ -+
T Consensus 15 ~~~G~a~~~~~~~~~~~---~~~~-~~~fn~vt~en~~kW~~~ep~~g~~~f~---~~D~~v~~a~~~gi~v~ght--lv 85 (303)
T 1ta3_B 15 SYFGTCSDQALLQNSQN---EAIV-ASQFGVITPENSMKWDALEPSQGNFGWS---GADYLVDYATQHNKKVRGHT--LV 85 (303)
T ss_dssp SEEEEEECHHHHHSHHH---HHHH-HHHCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHTTCEEEEEE--EE
T ss_pred CEEEEEcChhhcCCHHH---HHHH-HhhCCEEEECccccHHHhCCCCCccCch---HHHHHHHHHHHCCCEEEEee--cc
Confidence 46788887544332222 2233 679999998 67799999999999998 89999999999999987554 11
Q ss_pred ccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccccccc------Cc
Q 009890 120 CAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAY------GA 193 (523)
Q Consensus 120 ~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~------g~ 193 (523)
|. ...|.|+...+ +.+.++++++++++.++.+.+ |.|++|+|-||..+....+ ..
T Consensus 86 ---W~-~q~P~W~~~~~------~~~~~~~~~~~~i~~v~~rY~---------g~v~~Wdv~NE~~~~~g~~r~s~~~~~ 146 (303)
T 1ta3_B 86 ---WH-SQLPSWVSSIG------DANTLRSVMTNHINEVVGRYK---------GKIMHWDVVNEIFNEDGTFRNSVFYNL 146 (303)
T ss_dssp ---CS-SSCCHHHHTCC------CHHHHHHHHHHHHHHHHHHTT---------TSCSEEEEEESCBCTTSSBCCCHHHHH
T ss_pred ---cc-CCCChhhhcCC------CHHHHHHHHHHHHHHHHHhcC---------CcceEEEeecCcccCCCCcccchHHHh
Confidence 43 35899997532 335688999999999998877 3599999999986532111 12
Q ss_pred ccHHHHHHHHHHHHhcCCCcceEEccC
Q 009890 194 AGKSYIKWAAGMALSLDTGVPWVMCQQ 220 (523)
Q Consensus 194 ~~~~y~~~l~~~~~~~g~~vP~~~~~~ 220 (523)
.+.+|+..+-+.|++.+.+..++.++-
T Consensus 147 ~G~~~i~~af~~Ar~~dP~a~L~~Ndy 173 (303)
T 1ta3_B 147 LGEDFVRIAFETARAADPDAKLYINDY 173 (303)
T ss_dssp HTTHHHHHHHHHHHHHCTTSEEEEEES
T ss_pred ccHHHHHHHHHHHHHHCCCCEEEeccc
Confidence 356899999999999999999998864
|
| >1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A | Back alignment and structure |
|---|
Probab=98.95 E-value=1.6e-09 Score=117.85 Aligned_cols=160 Identities=19% Similarity=0.248 Sum_probs=123.6
Q ss_pred EEEEEEEeeCCCC-CccchH--HHHHHHHhCCCCEEEEc--cccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEec
Q 009890 41 RVLISGSIHYPRS-TPEMWP--DLIQKSKDGGLDVIETY--VFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 41 ~~l~sG~iHy~R~-~~~~W~--d~l~k~Ka~GlN~V~tY--vfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
-+++++++++..+ |++.|. ...+.+ +.+||.|..- +-|...||+||+|||+ .++++++.|+++||.|...+
T Consensus 174 ~f~~G~a~~~~~w~~~~~l~~~~~~~l~-~~~FN~vT~eNemKW~~iEP~~G~~~f~---~~D~ivd~a~~nGi~VrgHt 249 (530)
T 1us2_A 174 DFPIGVAVSNTDSATYNLLTNSREQAVV-KKHFNHLTAGNIMKMSYMQPTEGNFNFT---NADAFVDWATENNMTVHGHA 249 (530)
T ss_dssp SCCEEEEEBCTTCTTTBTTTCHHHHHHH-HHHCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEEeccccccchhhcCCHHHHHHH-HhhCCeEEECCcccHHHhcCCCCccCch---HHHHHHHHHHHCCCEEEEec
Confidence 3778999987644 555565 455555 6799999994 6699999999999998 89999999999999987554
Q ss_pred CceeccccCC-CCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccccc--ccC
Q 009890 116 GPYVCAEWNF-GGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDS--AYG 192 (523)
Q Consensus 116 GPyi~aEw~~-GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~--~~g 192 (523)
.+ |.. +..|.|+....+ +.+.++++++++++.++.+++.+ |.|.+|+|-||..+... .+.
T Consensus 250 --Lv---Whs~~q~P~Wv~~~~G-----s~~~l~~~~~~~I~~vv~rYk~~-------g~I~~WdV~NE~~~~~g~~~~r 312 (530)
T 1us2_A 250 --LV---WHSDYQVPNFMKNWAG-----SAEDFLAALDTHITTIVDHYEAK-------GNLVSWDVVNAAIDDNSPANFR 312 (530)
T ss_dssp --EE---CCCGGGSCHHHHTCCS-----CHHHHHHHHHHHHHHHHHHHHHH-------TCCCEEEEEESCBCSSSSCCBC
T ss_pred --cc---ccccccCchHHhcCCC-----CHHHHHHHHHHHHHHHHHHhCCC-------CceEEEEeecCcccCCcccccc
Confidence 11 322 358999985333 55789999999999999999854 57999999999865321 111
Q ss_pred --------cccH--HHHHHHHHHHHhcCCCcceEEccCC
Q 009890 193 --------AAGK--SYIKWAAGMALSLDTGVPWVMCQQS 221 (523)
Q Consensus 193 --------~~~~--~y~~~l~~~~~~~g~~vP~~~~~~~ 221 (523)
..|. +|+..+-+.|++.+.+..++.++-.
T Consensus 313 ~~~s~w~~~lG~~~d~i~~AF~~Ar~aDP~AkL~~NDYn 351 (530)
T 1us2_A 313 TTDSAFYVKSGNSSVYIERAFQTARAADPAVILYYNDYN 351 (530)
T ss_dssp CTTCHHHHHTTSCSHHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred ccCCHHHHHhCcHHHHHHHHHHHHHHHCCCCEEEecccc
Confidence 2344 8999999999999999999988753
|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A | Back alignment and structure |
|---|
Probab=98.94 E-value=6.8e-09 Score=103.76 Aligned_cols=154 Identities=10% Similarity=0.020 Sum_probs=108.3
Q ss_pred EEEecceEEE-CCEEEEEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHH
Q 009890 27 VTYDHRAVVI-GGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVA 105 (523)
Q Consensus 27 vt~d~~~l~i-dGk~~~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~ 105 (523)
++.+++.|+- ||+++++.+....+ .+.++..++.|+.||+.|+|+||+.+.+. +.|+-+....|+++++.|+
T Consensus 2 l~v~G~~i~d~~G~~~~lrGvn~~~-~w~~~~~~~~~~~i~~~G~N~VRi~~~~~------~~~~~~~~~~ld~~v~~a~ 74 (294)
T 2whl_A 2 FSVDGNTLYDANGQPFVMRGINHGH-AWYKDTASTAIPAIAEQGANTIRIVLSDG------GQWEKDDIDTIREVIELAE 74 (294)
T ss_dssp CEEETTEEECTTSCBCCCEEEEECG-GGCGGGHHHHHHHHHHTTCSEEEEEECCS------SSSCCCCHHHHHHHHHHHH
T ss_pred eEEECCEEECCCCCEEEEEEeeccc-ccCCcchHHHHHHHHHcCCCEEEEEecCC------CccCccHHHHHHHHHHHHH
Confidence 4567777874 89999988877522 34455577899999999999999988521 2333334458999999999
Q ss_pred HcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccc
Q 009890 106 EAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185 (523)
Q Consensus 106 ~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg 185 (523)
++||+|||.+-.+ |.+ ++....+...+++++|++++|.++ +.|++.|-||..
T Consensus 75 ~~Gi~Vild~H~~----------~~~-----------~~~~~~~~~~~~w~~ia~~y~~~~-------~~v~~el~NEP~ 126 (294)
T 2whl_A 75 QNKMVAVVEVHDA----------TGR-----------DSRSDLNRAVDYWIEMKDALIGKE-------DTVIINIANEWY 126 (294)
T ss_dssp TTTCEEEEEECTT----------TTC-----------CCHHHHHHHHHHHHHTHHHHTTCT-------TTEEEECCTTCC
T ss_pred HCCCEEEEEeccC----------CCC-----------CcchhHHHHHHHHHHHHHHHcCCC-------CeEEEEecCCCC
Confidence 9999999976321 111 122567788888899988888442 455799999986
Q ss_pred ccccccCc-ccHHHHHHHHHHHHhcCCCcceEEc
Q 009890 186 NIDSAYGA-AGKSYIKWAAGMALSLDTGVPWVMC 218 (523)
Q Consensus 186 ~~~~~~g~-~~~~y~~~l~~~~~~~g~~vP~~~~ 218 (523)
.. +.. .-..+.+.+.+..|+.+.+.|++..
T Consensus 127 ~~---~~~~~~~~~~~~~~~~IR~~d~~~~i~v~ 157 (294)
T 2whl_A 127 GS---WDGSAWADGYIDVIPKLRDAGLTHTLMVD 157 (294)
T ss_dssp CS---SCHHHHHHHHHHHHHHHHHTTCCSCEEEE
T ss_pred CC---CChHHHHHHHHHHHHHHHhcCCCcEEEEc
Confidence 41 211 1134556678888888888877654
|
| >1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A | Back alignment and structure |
|---|
Probab=98.94 E-value=8.4e-10 Score=112.86 Aligned_cols=150 Identities=16% Similarity=0.220 Sum_probs=118.9
Q ss_pred EEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEE--ccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCcee
Q 009890 42 VLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIET--YVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYV 119 (523)
Q Consensus 42 ~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~t--YvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi 119 (523)
++++++++..+++. ...+.+.+.++|.|.. -+-|...||++|+|||+ .++++++.|+++||.|...+ -+
T Consensus 14 ~~~G~a~~~~~~~~----~~~~~~~~~~fn~vt~eN~~kW~~~ep~~g~~~f~---~~D~~v~~a~~~gi~v~ght--lv 84 (313)
T 1v0l_A 14 RYFGTAIASGRLSD----STYTSIAGREFNMVTAENEMKIDATEPQRGQFNFS---SADRVYNWAVQNGKQVRGHT--LA 84 (313)
T ss_dssp CEEEEEECGGGTTC----HHHHHHHHHHCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHTTCEEEEEE--EE
T ss_pred CEEEEEeChhhcCC----HHHHHHHHhcCCEEEECCcccHHHhCCCCCccCch---HHHHHHHHHHHCCCEEEEEe--ec
Confidence 46788888766543 4567778889999999 47799999999999998 89999999999999986544 11
Q ss_pred ccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccccc-------ccC
Q 009890 120 CAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDS-------AYG 192 (523)
Q Consensus 120 ~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~-------~~g 192 (523)
|.. ..|.|+... +.+.++++++++++.++.+++ |.|.+|+|-||..+-.. .+.
T Consensus 85 ---W~~-q~P~W~~~~-------~~~~~~~~~~~~i~~v~~ry~---------g~i~~wdv~NE~~~~~g~~~~~~~~~~ 144 (313)
T 1v0l_A 85 ---WHS-QQPGWMQSL-------SGSALRQAMIDHINGVMAHYK---------GKIVQWDVVNEAFADGSSGARRDSNLQ 144 (313)
T ss_dssp ---CSS-SCCHHHHTC-------CHHHHHHHHHHHHHHHHHHTT---------TTCSEEEEEECCBCSSSSCCBCCSHHH
T ss_pred ---CcC-cCchhhhcC-------CHHHHHHHHHHHHHHHHHHcC---------CcceEEeeecccccCCCcccccCcHHH
Confidence 432 589999742 457889999999999998887 35999999999875321 112
Q ss_pred cccHHHHHHHHHHHHhcCCCcceEEccC
Q 009890 193 AAGKSYIKWAAGMALSLDTGVPWVMCQQ 220 (523)
Q Consensus 193 ~~~~~y~~~l~~~~~~~g~~vP~~~~~~ 220 (523)
..+.+|+..+-+.|++.+.+..++.++-
T Consensus 145 ~~G~~~i~~af~~Ar~~dP~a~L~~Ndy 172 (313)
T 1v0l_A 145 RSGNDWIEVAFRTARAADPSAKLCYNDY 172 (313)
T ss_dssp HTCTTHHHHHHHHHHHHCTTSEEEEEES
T ss_pred hhhHHHHHHHHHHHHhhCCCCEEEEecc
Confidence 2357899999999999999999998874
|
| >2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=9.9e-10 Score=114.22 Aligned_cols=157 Identities=15% Similarity=0.206 Sum_probs=118.1
Q ss_pred EEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEE--ccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCcee
Q 009890 42 VLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIET--YVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYV 119 (523)
Q Consensus 42 ~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~t--YvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi 119 (523)
++++++++..+++. ...++-+.++|.|.. -+-|...||+||+|||+ .++++++.|+++||.|...+ .+
T Consensus 19 f~~G~a~~~~~~~~-----~~~~l~~~~fn~vt~en~~kW~~~ep~~G~~~f~---~~D~~v~~a~~~gi~v~ght--lv 88 (356)
T 2uwf_A 19 FDIGAAVEPYQLEG-----RQAQILKHHYNSLVAENAMKPVSLQPREGEWNWE---GADKIVEFARKHNMELRFHT--LV 88 (356)
T ss_dssp CEEEEEECGGGSSH-----HHHHHHHHHCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHHTCEEEECC--SE
T ss_pred CeEEEEechhhcCH-----HHHHHHHhcCCEEEECCcccHHHhcCCCCccCch---HHHHHHHHHHHCCCEEEEee--cc
Confidence 67899998766544 233333679999999 67799999999999998 89999999999999986543 12
Q ss_pred ccccCCCCCCccccCC-CCeee---------ecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccccc
Q 009890 120 CAEWNFGGFPLWLHFI-PGIQF---------RTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDS 189 (523)
Q Consensus 120 ~aEw~~GG~P~WL~~~-p~i~~---------Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~ 189 (523)
|. ...|.|+... +|... ..+.+.++++++++++.++.+.+ |.|.+|+|-||..+...
T Consensus 89 ---W~-~q~P~W~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~rY~---------g~v~~wdv~NE~~~~~g 155 (356)
T 2uwf_A 89 ---WH-SQVPEWFFIDENGNRMVDETDPEKRKANKQLLLERMENHIKTVVERYK---------DDVTSWDVVNEVIDDDG 155 (356)
T ss_dssp ---ES-SSCCGGGGBCTTSCBGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHT---------TTCSEEEEEESCBCTTS
T ss_pred ---cc-ccCchhHhcCCCCcccccccccccCCCCHHHHHHHHHHHHHHHHHHcC---------CcceEEEeecccccCCC
Confidence 32 3589999753 33110 11345688899999999988887 47999999999975321
Q ss_pred c------cCcccHHHHHHHHHHHHh-cCCCcceEEccCC
Q 009890 190 A------YGAAGKSYIKWAAGMALS-LDTGVPWVMCQQS 221 (523)
Q Consensus 190 ~------~g~~~~~y~~~l~~~~~~-~g~~vP~~~~~~~ 221 (523)
. +...|.+|+..+-+.|++ .+.+..++.++-+
T Consensus 156 ~~r~s~~~~~~G~~~i~~af~~Ar~~~dP~a~L~~Ndyn 194 (356)
T 2uwf_A 156 GLRESEWYQITGTDYIKVAFETARKYGGEEAKLYINDYN 194 (356)
T ss_dssp SBCCCHHHHHHTTHHHHHHHHHHHHHHCTTCCEEEEESC
T ss_pred CcccchHHhhccHHHHHHHHHHHHhhCCCCCEEEecccc
Confidence 1 113456899999999999 9999999988753
|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=98.93 E-value=6.4e-09 Score=105.89 Aligned_cols=145 Identities=9% Similarity=-0.072 Sum_probs=106.0
Q ss_pred ccchHHHHHHHHhCCCCEEEEccccCcCCCC--CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccc
Q 009890 55 PEMWPDLIQKSKDGGLDVIETYVFWNLHEPV--RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWL 132 (523)
Q Consensus 55 ~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~--~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL 132 (523)
+..++++|+.||++|+|+||+.+.|..++|. ||+++=++...|+++|+.|+++||+|||-+-- .|.|.
T Consensus 35 ~~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~p~~~~~~~~~~ld~~v~~a~~~Gi~vildlh~----------~pg~~ 104 (341)
T 1vjz_A 35 GNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISLHR----------APGYS 104 (341)
T ss_dssp CCCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCEEEEEEEE----------ETTEE
T ss_pred CCCCHHHHHHHHHcCCCEEEeeCCHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEecC----------CCCcc
Confidence 4668999999999999999999999999986 67887666678999999999999999997621 12232
Q ss_pred cC----CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccC---cccHHHHHHHHHH
Q 009890 133 HF----IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYG---AAGKSYIKWAAGM 205 (523)
Q Consensus 133 ~~----~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g---~~~~~y~~~l~~~ 205 (523)
.. .+. .+ -.++.+.++..+++++|+++++.+ ...|++++|-||...... .+ ..-..|.+.+.+.
T Consensus 105 ~~~~~~~~~-~~-~~~~~~~~~~~~~~~~ia~ry~~~------~~~v~~~el~NEP~~~~~-~~~~~~~~~~~~~~~~~~ 175 (341)
T 1vjz_A 105 VNKEVEEKT-NL-WKDETAQEAFIHHWSFIARRYKGI------SSTHLSFNLINEPPFPDP-QIMSVEDHNSLIKRTITE 175 (341)
T ss_dssp SCTTSCCSS-CT-TTCHHHHHHHHHHHHHHHHHHTTS------CTTTEEEECSSCCCCCBT-TTBCHHHHHHHHHHHHHH
T ss_pred cccCCCccc-cc-cCCHHHHHHHHHHHHHHHHHHhcC------CCCeEEEEeccCCCCCCc-ccccHHHHHHHHHHHHHH
Confidence 11 000 01 135678888899999999998843 147999999999865321 11 1234567777777
Q ss_pred HHhcCCCcceEEc
Q 009890 206 ALSLDTGVPWVMC 218 (523)
Q Consensus 206 ~~~~g~~vP~~~~ 218 (523)
.|+.+.+.+++..
T Consensus 176 IR~~~~~~~I~v~ 188 (341)
T 1vjz_A 176 IRKIDPERLIIID 188 (341)
T ss_dssp HHHHCTTCCEEEE
T ss_pred HHhhCCCcEEEEc
Confidence 8888877776653
|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=1.2e-09 Score=109.76 Aligned_cols=154 Identities=13% Similarity=0.080 Sum_probs=111.3
Q ss_pred CCEEEEEEEEEee-CCC------CCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeecc--CcchHHHHHHHHHHc
Q 009890 37 GGKRRVLISGSIH-YPR------STPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFE--GRYDLVKFVKLVAEA 107 (523)
Q Consensus 37 dGk~~~l~sG~iH-y~R------~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~--G~~dL~~fl~la~~~ 107 (523)
||+++++.+-.++ ... +.....++.|+.||++|+|+||+.+.|..++|.++.|.+. ....++++++.|+++
T Consensus 7 ~g~~~~~~GvN~~~~~~~~~~~~w~~~~~~~d~~~l~~~G~n~vR~~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~ 86 (317)
T 3aof_A 7 ERNKILGRGINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKR 86 (317)
T ss_dssp HHHHHHCEEEECCSSTTSSSTTTTSCCCCTHHHHHHHHHTCSEEEECCCGGGGBCSSTTCCBCHHHHHHHHHHHHHHHHT
T ss_pred hhcccccccCcccccccCCCCCcCCCCCCHHHHHHHHHcCCCEEEEeccHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHC
Confidence 5677777777776 221 2223348899999999999999999999999876655532 234799999999999
Q ss_pred CCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccc
Q 009890 108 GLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNI 187 (523)
Q Consensus 108 GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~ 187 (523)
||+|||.+- .+|.|. .+++...++..+++++|+++++.+ ..|++++|-||....
T Consensus 87 Gi~vild~h----------~~~~~~---------~~~~~~~~~~~~~~~~ia~~~~~~-------~~v~~~el~NEP~~~ 140 (317)
T 3aof_A 87 GLAVVINIH----------HYEELM---------NDPEEHKERFLALWKQIADRYKDY-------PETLFFEILNAPHGN 140 (317)
T ss_dssp TCEEEEECC----------CCHHHH---------HCHHHHHHHHHHHHHHHHHHHTTS-------CTTEEEECCSSCCTT
T ss_pred CCEEEEEec----------CCcccc---------CCcHHHHHHHHHHHHHHHHHhcCC-------CCeEEEEeccCCCCC
Confidence 999998762 123232 134567888888999999988854 268999999998642
Q ss_pred ccccCcccHHHHHHHHHHHHhcCCCcceEEc
Q 009890 188 DSAYGAAGKSYIKWAAGMALSLDTGVPWVMC 218 (523)
Q Consensus 188 ~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~ 218 (523)
.. ...-.+|.+.+.+.+|+.+.+.+++..
T Consensus 141 ~~--~~~~~~~~~~~~~~iR~~~p~~~i~v~ 169 (317)
T 3aof_A 141 LT--PEKWNELLEEALKVIRSIDKKHTIIIG 169 (317)
T ss_dssp SC--HHHHHHHHHHHHHHHHHHCSSSCEEEC
T ss_pred CC--HHHHHHHHHHHHHHHHhhCCCCEEEEC
Confidence 10 012245677788888888888877664
|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A | Back alignment and structure |
|---|
Probab=98.92 E-value=4.8e-09 Score=106.64 Aligned_cols=140 Identities=10% Similarity=0.048 Sum_probs=101.3
Q ss_pred HHHHHHHHhCCCCEEEEccccCcCCCCC--ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCC
Q 009890 59 PDLIQKSKDGGLDVIETYVFWNLHEPVR--NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIP 136 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~tYvfWn~HEp~~--G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p 136 (523)
+++|+.||++|+|+||+.+.|..++|.+ |.++=++...|+++|+.|+++||+|||-+-.+-... |....+
T Consensus 31 ~~d~~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~Gi~vildlh~~~g~~--------~~~~~~ 102 (343)
T 1ceo_A 31 EKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHHAPGYR--------FQDFKT 102 (343)
T ss_dssp HHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEECCC----------------
T ss_pred HHHHHHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCCCEEEEEecCCCccc--------cCCCCc
Confidence 6889999999999999999999998876 788755556899999999999999998763211011 221100
Q ss_pred CeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCcccHHHHHHHHHHHHhcCCCcceE
Q 009890 137 GIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWV 216 (523)
Q Consensus 137 ~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~ 216 (523)
. .+ -.++...++..+++++|+++++.+ ..|++++|-||..... ...-..+++.+.+..|+.+.+.|++
T Consensus 103 ~-~~-~~~~~~~~~~~~~~~~ia~~~~~~-------~~v~~~el~NEP~~~~---~~~~~~~~~~~~~~IR~~~p~~~i~ 170 (343)
T 1ceo_A 103 S-TL-FEDPNQQKRFVDIWRFLAKRYINE-------REHIAFELLNQVVEPD---STRWNKLMLECIKAIREIDSTMWLY 170 (343)
T ss_dssp C-CT-TTCHHHHHHHHHHHHHHHHHTTTC-------CSSEEEECCSCCCCSS---SHHHHHHHHHHHHHHHHHCSSCCEE
T ss_pred c-cC-cCCHHHHHHHHHHHHHHHHHhcCC-------CCeEEEEeccCCCCcc---hHHHHHHHHHHHHHHHhhCCCCEEE
Confidence 0 01 135677888888999999888843 3699999999986531 1223466777888888888887766
Q ss_pred Ec
Q 009890 217 MC 218 (523)
Q Consensus 217 ~~ 218 (523)
..
T Consensus 171 v~ 172 (343)
T 1ceo_A 171 IG 172 (343)
T ss_dssp EE
T ss_pred Ee
Confidence 54
|
| >2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A | Back alignment and structure |
|---|
Probab=98.85 E-value=3.4e-09 Score=112.56 Aligned_cols=150 Identities=14% Similarity=0.186 Sum_probs=118.8
Q ss_pred EEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEE--ccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCcee
Q 009890 42 VLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIET--YVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYV 119 (523)
Q Consensus 42 ~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~t--YvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi 119 (523)
+++++.++..+++. ...+.|.+.+||.|.. -+-|...||+||+|||+ .++++++.|+++||.|...+- +
T Consensus 14 ~~~G~a~~~~~~~~----~~~~~~~~~~fn~~t~en~~kw~~~ep~~g~~~f~---~~D~~~~~a~~~gi~v~ghtl--v 84 (436)
T 2d1z_A 14 RYFGTAIASGKLGD----SAYTTIASREFNMVTAENEMKIDATEPQRGQFNFS---AGDRVYNWAVQNGKQVRGHTL--A 84 (436)
T ss_dssp CEEEEEECGGGTTC----HHHHHHHHHHCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHTTCEEEEEEE--E
T ss_pred CEEEEEeChhhcCC----HHHHHHHHHhCCeeeeccccccccccCCCCccChH---HHHHHHHHHHHCCCEEEEEEE--E
Confidence 46788888766543 4677788889999999 47799999999999998 899999999999999865441 1
Q ss_pred ccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccccc-------ccC
Q 009890 120 CAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDS-------AYG 192 (523)
Q Consensus 120 ~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~-------~~g 192 (523)
|. ...|.|+... +.+.++++++++++.++.+++ |.|.+|+|-||..+... .+.
T Consensus 85 ---W~-~q~P~W~~~~-------~~~~~~~~~~~~i~~v~~ry~---------g~v~~w~v~NE~~~~~~~g~~~~~~~~ 144 (436)
T 2d1z_A 85 ---WH-SQQPGWMQSL-------SGSTLRQAMIDHINGVMGHYK---------GKIAQWDVVSHAFSDDGSGGRRDSNLQ 144 (436)
T ss_dssp ---CS-TTCCHHHHTC-------CHHHHHHHHHHHHHHHHHHTT---------TTCSEEEEEESCBCSSSSCCBCCCTTG
T ss_pred ---eC-CCCchhhhcC-------CHHHHHHHHHHHHHHHHHhcC---------CceEEEEeecccccCCCCccccCchhh
Confidence 32 3579998742 457889999999999998887 47999999999864211 122
Q ss_pred cccHHHHHHHHHHHHhcCCCcceEEccC
Q 009890 193 AAGKSYIKWAAGMALSLDTGVPWVMCQQ 220 (523)
Q Consensus 193 ~~~~~y~~~l~~~~~~~g~~vP~~~~~~ 220 (523)
.-+.+|++.+-+.|++.+.++.++.++-
T Consensus 145 ~~g~~~i~~af~~Ar~~dP~a~l~~Ndy 172 (436)
T 2d1z_A 145 RTGNDWIEVAFRTARAADPAAKLCYNDY 172 (436)
T ss_dssp GGCTTHHHHHHHHHHHHCTTSEEEEEES
T ss_pred hcchHHHHHHHHHHHhhCCCCEEEEecc
Confidence 3457899999999999999999988875
|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=7.2e-09 Score=104.68 Aligned_cols=136 Identities=10% Similarity=0.057 Sum_probs=101.7
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCCc--eeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVRN--QYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH 133 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G--~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~ 133 (523)
..++++|+.||++|+|+||+.|.|..++|.++ .+|=++-..++++|+.|+++||+|||-+-- ++.
T Consensus 41 ~~~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vildlh~----------~~~--- 107 (320)
T 3nco_A 41 YIEDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHH----------FEE--- 107 (320)
T ss_dssp CCCHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCC----------CHH---
T ss_pred cCCHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcCC----------Ccc---
Confidence 35689999999999999999999999987644 444334568999999999999999997621 111
Q ss_pred CCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCcccHHHHHHHHHHHHhcCCCc
Q 009890 134 FIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGV 213 (523)
Q Consensus 134 ~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~v 213 (523)
+-.+.+.+.++..+++++|+++++.+ ..||+++|-||...... ...-..|++.+.+..|+.+...
T Consensus 108 ------~~~~~~~~~~~~~~~~~~ia~~~~~~-------~~vv~~~l~NEP~~~~~--~~~~~~~~~~~~~~IR~~dp~~ 172 (320)
T 3nco_A 108 ------LYQAPDKYGPVLVEIWKQVAQAFKDY-------PDKLFFEIFNEPAQNLT--PTKWNELYPKVLGEIRKTNPSR 172 (320)
T ss_dssp ------HHHCHHHHHHHHHHHHHHHHHHHTTS-------CTTEEEECCSCCCTTSC--HHHHHHHHHHHHHHHHHHCSSC
T ss_pred ------cccCcHHHHHHHHHHHHHHHHHHcCC-------CceEEEEeccCCCCCCC--HHHHHHHHHHHHHHHHhcCCCc
Confidence 11122457888888999999998854 36899999999864211 1123567888888888888888
Q ss_pred ceEEcc
Q 009890 214 PWVMCQ 219 (523)
Q Consensus 214 P~~~~~ 219 (523)
|++...
T Consensus 173 ~i~v~~ 178 (320)
T 3nco_A 173 IVIIDV 178 (320)
T ss_dssp CEEEEC
T ss_pred EEEECC
Confidence 876643
|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=98.84 E-value=1.5e-08 Score=106.88 Aligned_cols=149 Identities=9% Similarity=0.001 Sum_probs=100.4
Q ss_pred HHHHHHHHhCCCCEEEEccccCcCCCCCc-eeecc-CcchHHHHHHHHHHcCCEEEEecCcee--ccccCCCCCCccccC
Q 009890 59 PDLIQKSKDGGLDVIETYVFWNLHEPVRN-QYNFE-GRYDLVKFVKLVAEAGLYAHLRIGPYV--CAEWNFGGFPLWLHF 134 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G-~ydF~-G~~dL~~fl~la~~~GL~Vilr~GPyi--~aEw~~GG~P~WL~~ 134 (523)
+++|+.||++|+|+||+.|.|...+|.+| .|... ....|+++|+.|+++||+|||-+=..- ..-+++.|.. .
T Consensus 76 e~d~~~i~~~G~N~VRipi~~~~~~~~~~~py~~~~~l~~ld~vv~~a~~~Gi~VilDlH~~pG~qng~~~sG~~----~ 151 (408)
T 1h4p_A 76 EQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLR----D 151 (408)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSST----T
T ss_pred HHHHHHHHHCCCCEEEccCCHHHcccCCCCCCccccHHHHHHHHHHHHHHCCCEEEEECCCCCCccCCccCCCCC----C
Confidence 78999999999999999999888888766 34433 445799999999999999998651100 0001111210 0
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCcccH-HHHHHHHHHHHhc-CCC
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGK-SYIKWAAGMALSL-DTG 212 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~~-~y~~~l~~~~~~~-g~~ 212 (523)
+ ..-.++.+.++..+++++|+++++.+++ ...||+++|-||....... ...-+ .|++.+.+..|+. +..
T Consensus 152 -~---~~w~~~~~~~~~~~~w~~ia~ry~~~~y----~~~Vi~~el~NEP~~~~~~-~~~~~~~~~~~~~~~IR~~~~~~ 222 (408)
T 1h4p_A 152 -S---YKFLEDSNLAVTINVLNYILKKYSAEEY----LDIVIGIELINEPLGPVLD-MDKMKNDYLAPAYEYLRNNIKSD 222 (408)
T ss_dssp -C---CCTTSHHHHHHHHHHHHHHHHHTTSHHH----HTTEEEEESCSCCCGGGSC-HHHHHHHTHHHHHHHHHHTTCCC
T ss_pred -C---CCCCCHHHHHHHHHHHHHHHHHHcccCC----CCeEEEEEeccCCCCCCCC-HHHHHHHHHHHHHHHHHhhcCCC
Confidence 0 1113467788888999999988884410 0379999999999753110 01234 6667777778877 667
Q ss_pred cceEEccC
Q 009890 213 VPWVMCQQ 220 (523)
Q Consensus 213 vP~~~~~~ 220 (523)
.++++.++
T Consensus 223 ~~iii~dg 230 (408)
T 1h4p_A 223 QVIIIHDA 230 (408)
T ss_dssp CCEEEECT
T ss_pred CceEeeec
Confidence 77777643
|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=4.9e-09 Score=108.98 Aligned_cols=145 Identities=18% Similarity=0.184 Sum_probs=101.5
Q ss_pred ccchHHHHHHHHhCCCCEEEEccccC-cCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccc
Q 009890 55 PEMWPDLIQKSKDGGLDVIETYVFWN-LHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWL 132 (523)
Q Consensus 55 ~~~W~d~l~k~Ka~GlN~V~tYvfWn-~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL 132 (523)
+...+++|+.||++|+|+||+.|.|. ..+|. ++.+|.++-..++++|+.|+++||+|||-+--+ .+.. .-+.|+
T Consensus 68 ~~~~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~~Gi~vild~h~~---~~~~-~~g~w~ 143 (395)
T 2jep_A 68 PTVTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEGLYVIINIHGD---GYNS-VQGGWL 143 (395)
T ss_dssp CCCCHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCGG---GCTT-STTCCC
T ss_pred CcCcHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCCc---cccC-CCCccc
Confidence 45678999999999999999999995 45564 678887766789999999999999999876321 1111 113566
Q ss_pred cCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCc-------ccHHHHHHHHHH
Q 009890 133 HFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGA-------AGKSYIKWAAGM 205 (523)
Q Consensus 133 ~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~-------~~~~y~~~l~~~ 205 (523)
...+. +.+.+.++..+++++|+++++++ ..|++++|-||..... ++. .-..|.+.+.+.
T Consensus 144 ~~~~~-----~~~~~~~~~~~~~~~ia~~~~~~-------~~v~~~el~NEP~~~~--w~~~~~~~~~~~~~~~~~~~~a 209 (395)
T 2jep_A 144 LVNGG-----NQTAIKEKYKKVWQQIATKFSNY-------NDRLIFESMNEVFDGN--YGNPNSAYYTNLNAYNQIFVDT 209 (395)
T ss_dssp CTTCS-----CHHHHHHHHHHHHHHHHHHTTTC-------CTTEEEECCSSCSCSC--CSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCCcc-----cHHHHHHHHHHHHHHHHHHhCCC-------CCEEEEEeecCCCCCC--CCCCcHHHHHHHHHHHHHHHHH
Confidence 43221 22457788888999999888854 3789999999985421 221 123566677777
Q ss_pred HHhcCC---CcceEE
Q 009890 206 ALSLDT---GVPWVM 217 (523)
Q Consensus 206 ~~~~g~---~vP~~~ 217 (523)
.|+.|- ..+++.
T Consensus 210 IR~~~~~np~~~I~v 224 (395)
T 2jep_A 210 VRQTGGNNNARWLLV 224 (395)
T ss_dssp HHTSSGGGGTSCEEE
T ss_pred HHHhCCCCCCcEEEE
Confidence 777653 445554
|
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A | Back alignment and structure |
|---|
Probab=98.83 E-value=1.9e-08 Score=106.02 Aligned_cols=146 Identities=10% Similarity=-0.010 Sum_probs=102.2
Q ss_pred hHHHHHHHHhCCCCEEEEccccCcCCCCCce-eeccCcchHHHHHHHHHHcCCEEEEecC--c-eeccccCCCCC---Cc
Q 009890 58 WPDLIQKSKDGGLDVIETYVFWNLHEPVRNQ-YNFEGRYDLVKFVKLVAEAGLYAHLRIG--P-YVCAEWNFGGF---PL 130 (523)
Q Consensus 58 W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~-ydF~G~~dL~~fl~la~~~GL~Vilr~G--P-yi~aEw~~GG~---P~ 130 (523)
++++++.||++|+|+||+.|.|-..||.+|. |.-.....|+++|+.|+++||+|||-+= | ..++.+ ++|. +.
T Consensus 75 te~D~~~ik~~G~N~VRipi~~~~~~~~~~~py~~~~~~~ld~vV~~a~~~Gl~VILDlH~~pG~qng~~-~sG~~~~~~ 153 (399)
T 3n9k_A 75 TEQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFD-NSGLRDSYN 153 (399)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCCHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCG-GGSSTTCCC
T ss_pred cHHHHHHHHHcCCCEEEEcccHHHccCCCCCccchhHHHHHHHHHHHHHHCCCEEEEEecCCCccccccc-CCCCCCCCC
Confidence 3789999999999999999998888877663 4322234799999999999999998741 0 011111 1111 11
Q ss_pred cccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCcccHHHHHHHHHHHHhcC
Q 009890 131 WLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLD 210 (523)
Q Consensus 131 WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g 210 (523)
| .++.+.++..+++++|+++++.+.+ ...|++++|-||....... ...-+.|.+.+.+..|+.+
T Consensus 154 w-----------~~~~~~~~~~~~w~~iA~ry~~~~y----~~~V~~~el~NEP~~~~~~-~~~~~~~~~~a~~~IR~~~ 217 (399)
T 3n9k_A 154 F-----------QNGDNTQVTLNVLNTIFKKYGGNEY----SDVVIGIELLNEPLGPVLN-MDKLKQFFLDGYNSLRQTG 217 (399)
T ss_dssp T-----------TSTTHHHHHHHHHHHHHHHHSSGGG----TTTEEEEESCSCCCGGGSC-HHHHHHHHHHHHHHHHHTT
T ss_pred C-----------CCHHHHHHHHHHHHHHHHHhhcccC----CCceEEEEeccCCCCCCCC-HHHHHHHHHHHHHHHHhcC
Confidence 2 2234788888999999999985411 1379999999999753110 1234577888888889999
Q ss_pred CCcceEEccC
Q 009890 211 TGVPWVMCQQ 220 (523)
Q Consensus 211 ~~vP~~~~~~ 220 (523)
.+.+++..++
T Consensus 218 p~~~Iii~dg 227 (399)
T 3n9k_A 218 SVTPVIIHDA 227 (399)
T ss_dssp CCCCEEEECT
T ss_pred CCCeEEEeCC
Confidence 9988887654
|
| >1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A | Back alignment and structure |
|---|
Probab=98.81 E-value=5.2e-09 Score=109.71 Aligned_cols=158 Identities=20% Similarity=0.252 Sum_probs=118.1
Q ss_pred EEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEc--cccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCcee
Q 009890 42 VLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETY--VFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYV 119 (523)
Q Consensus 42 ~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tY--vfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi 119 (523)
+.++++++...++.+ ...+.| +.+||.|..- +-|...||+||+|||+ .++++++.|+++||.|...+- |
T Consensus 28 f~~G~a~~~~~~~~~---~~~~l~-~~~fn~vt~eNe~kW~~~ep~~G~~~f~---~~D~~v~~a~~~gi~vrghtl--v 98 (379)
T 1r85_A 28 FTIGAAVEPYQLQNE---KDVQML-KRHFNSIVAENVMKPISIQPEEGKFNFE---QADRIVKFAKANGMDIRFHTL--V 98 (379)
T ss_dssp CEEEEEECGGGGGCH---HHHHHH-HHHCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHTTCEEEEECS--C
T ss_pred CEEEEEcChhhcCCH---HHHHHH-HhhCCeEEECCcccHHHhcCCCCccCch---hHHHHHHHHHHCCCEEEEecc--c
Confidence 678999876554332 344445 5699999994 7799999999999998 899999999999999876641 1
Q ss_pred ccccCCCCCCccccCCC-Ceee---------ecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccccc
Q 009890 120 CAEWNFGGFPLWLHFIP-GIQF---------RTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDS 189 (523)
Q Consensus 120 ~aEw~~GG~P~WL~~~p-~i~~---------Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~ 189 (523)
|.. ..|.|+.... |-.. ..+.+.++++++++++.++.+++ |.|.+|+|-||..+...
T Consensus 99 ---W~~-q~P~W~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~rY~---------g~i~~wdV~NE~~~~~g 165 (379)
T 1r85_A 99 ---WHS-QVPQWFFLDKEGKPMVNETDPVKREQNKQLLLKRLETHIKTIVERYK---------DDIKYWDVVNEVVGDDG 165 (379)
T ss_dssp ---CST-TCCGGGGBCTTSSBGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHT---------TTCCEEEEEESCBCTTS
T ss_pred ---ccc-cCchhhhcCcCCccccccccccccCCCHHHHHHHHHHHHHHHHHHhC---------CCceEEEeecccccCCC
Confidence 432 4899997532 2111 12345688999999999998887 37999999999875321
Q ss_pred c------cCcccHHHHHHHHHHHHh-cCCCcceEEccCC
Q 009890 190 A------YGAAGKSYIKWAAGMALS-LDTGVPWVMCQQS 221 (523)
Q Consensus 190 ~------~g~~~~~y~~~l~~~~~~-~g~~vP~~~~~~~ 221 (523)
. +...|.+|+..+-+.|++ .+-++.+++++-.
T Consensus 166 ~~r~s~~~~~lG~~~i~~af~~Ar~~adP~a~L~~NDyn 204 (379)
T 1r85_A 166 KLRNSPWYQIAGIDYIKVAFQAARKYGGDNIKLYMNDYN 204 (379)
T ss_dssp SBCCCHHHHHHTTHHHHHHHHHHHHHHCTTSEEEEEESC
T ss_pred CccCchHHHhhhHHHHHHHHHHHHhhCCCCCEEEecccc
Confidence 1 112356899999999999 9999999887753
|
| >1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=2.7e-07 Score=94.90 Aligned_cols=132 Identities=19% Similarity=0.255 Sum_probs=88.8
Q ss_pred HHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCee
Q 009890 60 DLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQ 139 (523)
Q Consensus 60 d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~ 139 (523)
+.++.||+.|+|+||+++ | .+|.+|.+|++ .+++.++.|+++||+|++-+ .| ...|. -|..- ..|. .
T Consensus 31 d~~~ilk~~G~N~VRi~~-w--~~P~~g~~~~~---~~~~~~~~A~~~GlkV~ld~-Hy-sd~Wa---dPg~Q-~~p~-~ 97 (332)
T 1hjs_A 31 PLENILAANGVNTVRQRV-W--VNPADGNYNLD---YNIAIAKRAKAAGLGVYIDF-HY-SDTWA---DPAHQ-TMPA-G 97 (332)
T ss_dssp CHHHHHHHTTCCEEEEEE-C--SSCTTCTTSHH---HHHHHHHHHHHTTCEEEEEE-CC-SSSCC---BTTBC-BCCT-T
T ss_pred cHHHHHHHCCCCEEEEee-e--eCCCCCcCCHH---HHHHHHHHHHHCCCEEEEEe-cc-CCCcC---Ccccc-CCcc-c
Confidence 678999999999999998 5 78998888876 78888888999999999975 11 11121 23221 1222 1
Q ss_pred eecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccc-ccccC-----cccHHHHHHHHHHHHhcC
Q 009890 140 FRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNI-DSAYG-----AAGKSYIKWAAGMALSLD 210 (523)
Q Consensus 140 ~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~-~~~~g-----~~~~~y~~~l~~~~~~~g 210 (523)
...+.+.+.+++..+++.+++.+++ +|..+.++||.||..+- .+..| +.-.++++...+..|+..
T Consensus 98 W~~~~~~~~~~~~~yt~~vl~~l~~------~g~~~~~v~vGNEi~~g~~w~~g~~~~~~~~~~l~~~~~~avR~~~ 168 (332)
T 1hjs_A 98 WPSDIDNLSWKLYNYTLDAANKLQN------AGIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAWGIKDSS 168 (332)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHH------TTCCCSEEEESSSGGGEETBTTEETTCHHHHHHHHHHHHHHHHTSC
T ss_pred cccchHHHHHHHHHHHHHHHHHHHH------cCCCCCEEEEeecccccccCcCCCccCHHHHHHHHHHHHHHHHHhc
Confidence 2223366788889999999998884 45567789999998641 11111 122345555556666555
|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=98.73 E-value=4.5e-08 Score=101.47 Aligned_cols=143 Identities=10% Similarity=0.013 Sum_probs=103.5
Q ss_pred CccchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccc
Q 009890 54 TPEMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWL 132 (523)
Q Consensus 54 ~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL 132 (523)
.+..++++|+.||+.|+|+||+.|.|..++|. ++.+|-+....++++|+.|+++||+|||-+- ..|.|.
T Consensus 59 ~~~~~~~di~~i~~~G~n~vRipv~w~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vild~H----------~~~~w~ 128 (380)
T 1edg_A 59 GIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVILNTH----------HDVDKV 128 (380)
T ss_dssp CSCCCHHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTTCEEEEECC----------SCBCTT
T ss_pred CCcccHHHHHHHHHcCCCEEEecccHHhhcCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEeCC----------Cchhhh
Confidence 45577999999999999999999999999874 5777755556899999999999999999862 234565
Q ss_pred cC-CCCeeeecCChhHHHHH-HHHHHHHHHHHHhcccccccCCceEeccccccccccc--ccc----C--------cccH
Q 009890 133 HF-IPGIQFRTDNEPFKAEM-QRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNID--SAY----G--------AAGK 196 (523)
Q Consensus 133 ~~-~p~i~~Rt~d~~fl~~~-~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~--~~~----g--------~~~~ 196 (523)
.. .| -.+++...++. .+++++|++++|.+ ..|++++|-||..... ..+ . ..-.
T Consensus 129 ~~~~~----~~~~~~~~~~~~~~~w~~ia~~~~~~-------~~v~~~el~NEP~~~~~~~~W~~~~~~g~~~~~~~~l~ 197 (380)
T 1edg_A 129 KGYFP----SSQYMASSKKYITSVWAQIAARFANY-------DEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCIN 197 (380)
T ss_dssp TSBCS----SGGGHHHHHHHHHHHHHHHHHHTTTC-------CTTEEEECCSSCCCTTSTTTTSCCTTCHHHHHHHHHHH
T ss_pred cCCCC----ccccHHHHHHHHHHHHHHHHHHhCCC-------CCEEEEEecCCCCcCCCCcccccccCCCchHHHHHHHH
Confidence 42 11 12445677777 88888888888844 3789999999986532 112 1 0114
Q ss_pred HHHHHHHHHHHhcC---CCcceEE
Q 009890 197 SYIKWAAGMALSLD---TGVPWVM 217 (523)
Q Consensus 197 ~y~~~l~~~~~~~g---~~vP~~~ 217 (523)
+|++.+.+..|+.| -+.+++.
T Consensus 198 ~~~~~~~~~IR~~g~~np~~~Iiv 221 (380)
T 1edg_A 198 QLNQDFVNTVRATGGKNASRYLMC 221 (380)
T ss_dssp HHHHHHHHHHHHTCGGGGTSCEEE
T ss_pred HHHHHHHHHHHhcCCCCCCceEEE
Confidence 67777888888875 3445544
|
| >1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A | Back alignment and structure |
|---|
Probab=98.73 E-value=1.9e-08 Score=104.30 Aligned_cols=153 Identities=16% Similarity=0.198 Sum_probs=114.5
Q ss_pred EEEEEEeeCCCCCccchH--HHHHHHHhCCCCEEEE--ccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCc
Q 009890 42 VLISGSIHYPRSTPEMWP--DLIQKSKDGGLDVIET--YVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGP 117 (523)
Q Consensus 42 ~l~sG~iHy~R~~~~~W~--d~l~k~Ka~GlN~V~t--YvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GP 117 (523)
++++++++....+.+.|. ...+.+ +.++|.|.. -+-|...||++| |||+ .++++++.|+++||.|...+
T Consensus 9 f~~G~a~~~~~~~~~~~~~~~~~~~~-~~~fn~vt~en~~kW~~~ep~~G-~~f~---~~D~~v~~a~~~gi~v~ght-- 81 (348)
T 1w32_A 9 FPIGVAVAASGGNADIFTSSARQNIV-RAEFNQITAENIMKMSYMYSGSN-FSFT---NSDRLVSWAAQNGQTVHGHA-- 81 (348)
T ss_dssp SCEEEEEBCSSSTTBTTTCHHHHHHH-HHHCSEEEESSTTSGGGGEETTE-ECCH---HHHHHHHHHHHTTCEEEEEE--
T ss_pred CeEEEEccCcccchhhcCcHHHHHHH-HhhCCeEEECCccchhhhccCCC-CCch---HHHHHHHHHHHCCCEEEEEe--
Confidence 678888887222222332 233444 578999998 567999999999 9999 89999999999999987554
Q ss_pred eeccccCC-CCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccc-----c--
Q 009890 118 YVCAEWNF-GGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNID-----S-- 189 (523)
Q Consensus 118 yi~aEw~~-GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~-----~-- 189 (523)
-+ |-. +..|.|+... ++.++++++++++.++.+.+ |.|.+|+|-||..+.. .
T Consensus 82 l~---W~~~~q~P~W~~~~--------~~~~~~~~~~~i~~v~~rY~---------g~i~~wdv~NE~~~~~~~~~~g~~ 141 (348)
T 1w32_A 82 LV---WHPSYQLPNWASDS--------NANFRQDFARHIDTVAAHFA---------GQVKSWDVVNEALFDSADDPDGRG 141 (348)
T ss_dssp EE---CCCGGGCCTTCSTT--------CTTHHHHHHHHHHHHHHHTT---------TTCSEEEEEECCBCCGGGCTTCCC
T ss_pred ee---cCccccCchhhhcC--------CHHHHHHHHHHHHHHHHHhC---------CceeEEEeecccccCCccccCCcc
Confidence 11 322 3589999742 24589999999999998877 4799999999986532 1
Q ss_pred ---c------cCcc-cHHHHHHHHHHHHhcCCCcceEEccCC
Q 009890 190 ---A------YGAA-GKSYIKWAAGMALSLDTGVPWVMCQQS 221 (523)
Q Consensus 190 ---~------~g~~-~~~y~~~l~~~~~~~g~~vP~~~~~~~ 221 (523)
. +... +.+|+..+-+.|++.+.+..++.++-.
T Consensus 142 ~~~~~r~s~~~~~lgG~~~i~~aF~~Ar~adP~a~L~~NDyn 183 (348)
T 1w32_A 142 SANGYRQSVFYRQFGGPEYIDEAFRRARAADPTAELYYNDFN 183 (348)
T ss_dssp EETTEECCHHHHHHTSTHHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred cccccccchHHHhcCchHHHHHHHHHHHHhCCCCEEEecccc
Confidence 0 1112 678999999999999999999988753
|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=6.3e-08 Score=99.66 Aligned_cols=141 Identities=14% Similarity=0.185 Sum_probs=104.5
Q ss_pred ccchHHHHHHHHhCCCCEEEEccccCcCCCC--CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccc
Q 009890 55 PEMWPDLIQKSKDGGLDVIETYVFWNLHEPV--RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWL 132 (523)
Q Consensus 55 ~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~--~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL 132 (523)
|..=+++|+.||+.|+|+||+.|.|..++|. ++.+|-++-..|+++|+.|.++||+|||-+= ..|.|.
T Consensus 41 p~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vildlH----------~~~~w~ 110 (345)
T 3ndz_A 41 PMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLH----------HENEWL 110 (345)
T ss_dssp CCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCC----------SCTTTC
T ss_pred CCCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecC----------Cccccc
Confidence 3344889999999999999999999999886 6777766667899999999999999999762 234565
Q ss_pred cCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccc--cccCc-------ccHHHHHHHH
Q 009890 133 HFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNID--SAYGA-------AGKSYIKWAA 203 (523)
Q Consensus 133 ~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~--~~~g~-------~~~~y~~~l~ 203 (523)
.... .+.+...+...+++++|++++|.+ .+++++.|=||..... ..+.. .-++|.+.+.
T Consensus 111 ~~~~-----~~~~~~~~~~~~~w~~iA~~y~~~-------~~~v~~el~NEP~~~~~~~~W~~~~~~~~~~l~~~~~~~i 178 (345)
T 3ndz_A 111 KPFY-----ANEAQVKAQLTKVWTQIANNFKKY-------GDHLIFETMNEPRPVGASLQWTGGSYENREVVNRYNLTAV 178 (345)
T ss_dssp CCST-----TTHHHHHHHHHHHHHHHHHHTTTC-------CTTEEEESCSCCCCCSGGGTTSCCCHHHHHHHHHHHHHHH
T ss_pred cccc-----cchHHHHHHHHHHHHHHHHHHcCC-------CCceEEEeccCCCCCCcccccCCCCchhHHHHHHHHHHHH
Confidence 4321 245667888888999999998843 3688999999996431 11221 1236778888
Q ss_pred HHHHhcCCC---cceEE
Q 009890 204 GMALSLDTG---VPWVM 217 (523)
Q Consensus 204 ~~~~~~g~~---vP~~~ 217 (523)
+..|+.|-. .+++.
T Consensus 179 ~aIR~~g~~np~~~Iiv 195 (345)
T 3ndz_A 179 NAIRATGGNNATRYIMV 195 (345)
T ss_dssp HHHHHTCGGGGTSCEEE
T ss_pred HHHHhcCCCCCCcEEEE
Confidence 888888543 44554
|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=5.1e-08 Score=98.05 Aligned_cols=158 Identities=16% Similarity=0.119 Sum_probs=108.2
Q ss_pred eeEEEecceEE-ECCEEEEEEEEEeeCCCC-CccchHHHHHHHH-hCCCCEEEEccccCcCCCCCc-eeeccC-cchHHH
Q 009890 25 ANVTYDHRAVV-IGGKRRVLISGSIHYPRS-TPEMWPDLIQKSK-DGGLDVIETYVFWNLHEPVRN-QYNFEG-RYDLVK 99 (523)
Q Consensus 25 ~~vt~d~~~l~-idGk~~~l~sG~iHy~R~-~~~~W~d~l~k~K-a~GlN~V~tYvfWn~HEp~~G-~ydF~G-~~dL~~ 99 (523)
..++.+++.|. .||+++++.+-..|..-+ ++..=++.|+.++ ++|+|+||+.+.|.. +| ..|=++ ...|++
T Consensus 9 ~~l~v~G~~i~d~~G~~v~l~Gvn~~~~~w~~~~~~~~d~~~l~~~~G~N~vRi~~~~~~----~~~~~~~~~~l~~ld~ 84 (306)
T 2cks_A 9 GKVQVCGTQLCDEHGNPVQLRGMSTHGIQWFDHCLTDSSLDALAYDWKADIIRLSMYIQE----DGYETNPRGFTDRMHQ 84 (306)
T ss_dssp CSCEEETTEEECTTSCBCCCEEEECCCHHHHGGGCSHHHHHHHHHTSCCSEEEEEEESST----TSGGGCHHHHHHHHHH
T ss_pred CeEEEECCEEECCCCCEEEEEEEecCcccccCcCCCHHHHHHHHHHcCCCEEEEEeeecC----CCcccCHHHHHHHHHH
Confidence 45778888885 389999999998874221 1111156788775 699999999999952 12 122111 147899
Q ss_pred HHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecc
Q 009890 100 FVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQ 179 (523)
Q Consensus 100 fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~Q 179 (523)
+|+.|.++||+|||-+-- - .+| .+ ....++..+++++|++++|.++ .|| ++
T Consensus 85 ~v~~a~~~Gl~vild~h~----~--~~g-------~~--------~~~~~~~~~~~~~ia~~y~~~~-------~V~-~e 135 (306)
T 2cks_A 85 LIDMATARGLYVIVDWHI----L--TPG-------DP--------HYNLDRAKTFFAEIAQRHASKT-------NVL-YE 135 (306)
T ss_dssp HHHHHHTTTCEEEEEEEC----C--SSC-------CG--------GGGHHHHHHHHHHHHHHHTTCS-------SEE-EE
T ss_pred HHHHHHHCCCEEEEEecC----C--CCC-------Cc--------ccCHHHHHHHHHHHHHHhCCCC-------cEE-EE
Confidence 999999999999987621 0 011 01 1235677788899998888543 577 99
Q ss_pred ccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEc
Q 009890 180 IENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMC 218 (523)
Q Consensus 180 IENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~ 218 (523)
|-||.....+ ..-..|++.+.+..|+.+.+.|++.-
T Consensus 136 l~NEP~~~~~---~~~~~~~~~~~~~IR~~dp~~~i~v~ 171 (306)
T 2cks_A 136 IANEPNGVSW---ASIKSYAEEVIPVIRQRDPDSVIIVG 171 (306)
T ss_dssp CCSCCCSSCH---HHHHHHHHHHHHHHHHHCTTCCEEEC
T ss_pred cCCCCCCCCH---HHHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 9999865321 12357888899999999888776654
|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 | Back alignment and structure |
|---|
Probab=98.69 E-value=8.3e-08 Score=102.88 Aligned_cols=157 Identities=11% Similarity=0.042 Sum_probs=107.7
Q ss_pred CeeEEEecceEEE-CCEEEEEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHH
Q 009890 24 GANVTYDHRAVVI-GGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVK 102 (523)
Q Consensus 24 ~~~vt~d~~~l~i-dGk~~~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~ 102 (523)
...+..+++.|.- ||+++++.+-.. ...+.+..-++.|+.||+.|+|+||+.+.+. +.|+=+....|+++|+
T Consensus 7 ~~~l~v~G~~i~d~nG~~v~lrGvN~-~~~W~~~~~~~di~~ik~~G~N~VRipv~~g------~~~~~~~l~~ld~vv~ 79 (464)
T 1wky_A 7 NSGFYVSGTTLYDANGNPFVMRGINH-GHAWYKDQATTAIEGIANTGANTVRIVLSDG------GQWTKDDIQTVRNLIS 79 (464)
T ss_dssp -CCCEEETTEEECTTSCBCCCEEEEE-CGGGCGGGHHHHHHHHHTTTCSEEEEEECCS------SSSCCCCHHHHHHHHH
T ss_pred CCCeEEeCCEEECCCCCEEEEEEEEe-CcccCCcchHHHHHHHHHCCCCEEEEEcCCC------CccCHHHHHHHHHHHH
Confidence 3557888888885 899999888774 3233344567899999999999999988521 1222123347999999
Q ss_pred HHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccc
Q 009890 103 LVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIEN 182 (523)
Q Consensus 103 la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIEN 182 (523)
.|+++||+|||-+-. . ++ ..++..+++..+++++|++++|.+ .+.|++.|-|
T Consensus 80 ~a~~~Gl~VIlDlH~----------~-------~g----~~~~~~~~~~~~~w~~iA~ryk~~-------~~~Vi~eL~N 131 (464)
T 1wky_A 80 LAEDNNLVAVLEVHD----------A-------TG----YDSIASLNRAVDYWIEMRSALIGK-------EDTVIINIAN 131 (464)
T ss_dssp HHHHTTCEEEEEECT----------T-------TT----CCCHHHHHHHHHHHHHTGGGTTTC-------TTTEEEECCT
T ss_pred HHHHCCCEEEEEecC----------C-------CC----CCChHHHHHHHHHHHHHHHHHcCC-------CCeEEEEecc
Confidence 999999999997621 1 11 122356777778888887776643 2455799999
Q ss_pred cccccccccCc-ccHHHHHHHHHHHHhcCCCcceEEc
Q 009890 183 EYGNIDSAYGA-AGKSYIKWAAGMALSLDTGVPWVMC 218 (523)
Q Consensus 183 Eyg~~~~~~g~-~~~~y~~~l~~~~~~~g~~vP~~~~ 218 (523)
|.... +.. .-..+.+.+.+..|+.+...|++..
T Consensus 132 EP~~~---~~~~~w~~~~~~~i~aIR~~dp~~~I~v~ 165 (464)
T 1wky_A 132 EWFGS---WDGAAWADGYKQAIPRLRNAGLNNTLMID 165 (464)
T ss_dssp TCCCS---SCHHHHHHHHHHHHHHHHHTTCCSCEEEE
T ss_pred CCCCC---CCHHHHHHHHHHHHHHHHhcCCCCEEEEc
Confidence 98641 111 1134556678888888888877664
|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=98.69 E-value=8.4e-08 Score=103.31 Aligned_cols=160 Identities=17% Similarity=0.146 Sum_probs=110.1
Q ss_pred CCeeEEEecceEE-ECCEEEEEEEE--EeeCCCCCccchHHHHHHHHhCCCCEEEEccccCcC-CCCCceeeccC-cchH
Q 009890 23 FGANVTYDHRAVV-IGGKRRVLISG--SIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLH-EPVRNQYNFEG-RYDL 97 (523)
Q Consensus 23 ~~~~vt~d~~~l~-idGk~~~l~sG--~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~H-Ep~~G~ydF~G-~~dL 97 (523)
....+..+++.|. .||+| +.+- +.|...+.. +++++.||++|+|+||+++.|... -+.+|.++=.. ...|
T Consensus 8 ~~~~l~v~G~~ivd~~G~~--lrGv~~~~~w~~~~~---~~d~~~i~~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~l 82 (491)
T 2y8k_A 8 GRPRLNAARTTFVGDNGQP--LRGPYTSTEWTAAAP---YDQIARVKELGFNAVHLYAECFDPRYPAPGSKAPGYAVNEI 82 (491)
T ss_dssp CCCEECTTSSSEECTTSCB--CEEEEEECSSSCCCC---HHHHGGGGGGTCCEEEEEEEECCTTTTSTTCCCTTTTHHHH
T ss_pred CCceEEeCCCEEECCCCCE--eecccccCCcCCCCC---HHHHHHHHHcCCCEEEECceeecccccCCCccChhHHHHHH
Confidence 3355778888888 69999 4444 677654422 478999999999999999987432 22333332111 2379
Q ss_pred HHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEe
Q 009890 98 VKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIIL 177 (523)
Q Consensus 98 ~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~ 177 (523)
+++|+.|.++||+|||.... ++ ..+. ...++..+++++|++++|.++ .||
T Consensus 83 d~vv~~a~~~Gl~VIlD~H~--------~~------~~~~--------~~~~~~~~~w~~iA~ryk~~p-------~Vi- 132 (491)
T 2y8k_A 83 DKIVERTRELGLYLVITIGN--------GA------NNGN--------HNAQWARDFWKFYAPRYAKET-------HVL- 132 (491)
T ss_dssp HHHHHHHHHHTCEEEEEEEC--------TT------CTTC--------CCHHHHHHHHHHHHHHHTTCT-------TEE-
T ss_pred HHHHHHHHHCCCEEEEECCC--------CC------CCcc--------ccHHHHHHHHHHHHHHhCCCC-------ceE-
Confidence 99999999999999998631 11 0111 125778889999999988543 577
Q ss_pred ccccccccccccccCcc------cHHHHHHHHHHHHhcCCCcceEE
Q 009890 178 SQIENEYGNIDSAYGAA------GKSYIKWAAGMALSLDTGVPWVM 217 (523)
Q Consensus 178 ~QIENEyg~~~~~~g~~------~~~y~~~l~~~~~~~g~~vP~~~ 217 (523)
++|-||.......+.+. -.+|++.+.+..|+.+...|++.
T Consensus 133 ~el~NEP~~w~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I~v 178 (491)
T 2y8k_A 133 YEIHNEPVAWGPPYSSSTANPPGAVDMEIDVYRIIRTYAPETPVLL 178 (491)
T ss_dssp EECCSSCSSSCSCTTSTTSSSTTHHHHHHHHHHHHHHHCTTSCEEE
T ss_pred EEeecCCCCCCCccccccccHHHHHHHHHHHHHHHHhhCCCcEEEE
Confidence 99999996422122211 45778888888999898887776
|
| >1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=98.66 E-value=1.1e-08 Score=108.60 Aligned_cols=110 Identities=18% Similarity=0.262 Sum_probs=93.7
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFI 135 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~ 135 (523)
..|+++++.||++|+|++|+-+.|...+|.+|++|++|-..++++|+.|.++||.+++-+= .-++|.||.+.
T Consensus 50 ~~~~eDi~lm~~~G~~~~R~si~W~ri~P~~g~~n~~gl~~yd~lid~l~~~GI~pivtL~--------H~d~P~~l~~~ 121 (423)
T 1vff_A 50 ELYRDDIQLMTSLGYNAYRFSIEWSRLFPEENKFNEDAFMKYREIIDLLLTRGITPLVTLH--------HFTSPLWFMKK 121 (423)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCHHHHCSBTTBCCHHHHHHHHHHHHHHHHTTCEEEEEEE--------SSCCBHHHHHT
T ss_pred hccHHHHHHHHHcCCCEEEeecCHHHhCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcc--------CCcccHHHHhc
Confidence 3489999999999999999999999999999999999999999999999999999998762 44689999765
Q ss_pred CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccc
Q 009890 136 PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNI 187 (523)
Q Consensus 136 p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~ 187 (523)
.+. .++.+.++..+|.+.++++++ + |..|++-||+...
T Consensus 122 ggw----~~~~~~~~f~~ya~~~~~r~g---------d-V~~W~t~NEp~~~ 159 (423)
T 1vff_A 122 GGF----LREENLKHWEKYIEKVAELLE---------K-VKLVATFNEPMVY 159 (423)
T ss_dssp TGG----GSGGGHHHHHHHHHHHHHHTT---------T-CCEEEEEECHHHH
T ss_pred CCC----CCHHHHHHHHHHHHHHHHHhC---------C-CceEEEecCcchh
Confidence 332 467788888888888877775 3 8899999998743
|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=1.5e-07 Score=97.16 Aligned_cols=165 Identities=18% Similarity=0.086 Sum_probs=108.2
Q ss_pred CeeEEEecceEEE--CCEEEEEEEEEeeCCCC-CccchHHHHHHHH-hCCCCEEEEccccCcCCCCCceeeccCcchHHH
Q 009890 24 GANVTYDHRAVVI--GGKRRVLISGSIHYPRS-TPEMWPDLIQKSK-DGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVK 99 (523)
Q Consensus 24 ~~~vt~d~~~l~i--dGk~~~l~sG~iHy~R~-~~~~W~d~l~k~K-a~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~ 99 (523)
..-|+.+++..++ +|+++++.+-..|...+ ++..-++.++.|+ +.|+|+||+.+.|. + .+..+|=+....|++
T Consensus 18 ~~~~~v~G~~~lvd~~G~~~~lrGvn~~~~~~~~~~~~~~d~~~l~~~~G~N~VRip~~~~--~-~~~~~~~~~l~~ld~ 94 (364)
T 1g01_A 18 LQLVELNGQLTLAGEDGTPVQLRGMSTHGLQWFGEIVNENAFVALSNDWGSNMIRLAMYIG--E-NGYATNPEVKDLVYE 94 (364)
T ss_dssp CEEEEETTEEEEECTTSCBCCCEEEEESCHHHHGGGCSHHHHHHHHTTSCCSEEEEEEESS--S-SSTTTCTTHHHHHHH
T ss_pred CCcEEecCCeeEECCCCCEEEEEEEecCcccccCCccCHHHHHHHHHHCCCCEEEEEeeeC--C-CCCccCHHHHHHHHH
Confidence 3457788774566 59999999988875322 2223367899986 99999999999983 2 122444333457999
Q ss_pred HHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecc
Q 009890 100 FVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQ 179 (523)
Q Consensus 100 fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~Q 179 (523)
+|+.|+++||+|||-. |... . |-| ++...+...+++++|++++|.+ .+...|| +.
T Consensus 95 ~v~~a~~~Gi~VIld~----H~~~-~-g~~--------------~~~~~~~~~~~w~~ia~~y~~~----~~~~~Vi-~e 149 (364)
T 1g01_A 95 GIELAFEHDMYVIVDW----HVHA-P-GDP--------------RADVYSGAYDFFEEIADHYKDH----PKNHYII-WE 149 (364)
T ss_dssp HHHHHHHTTCEEEEEE----ECCS-S-SCT--------------TSGGGTTHHHHHHHHHHHHTTC----TTGGGEE-EE
T ss_pred HHHHHHHCCCEEEEEe----ccCC-C-CCC--------------ChHHHHHHHHHHHHHHHHhhcc----CCCCeEE-EE
Confidence 9999999999999875 2211 1 111 1112234567888898888822 0123576 99
Q ss_pred cccccccccc-ccC----c----ccHHHHHHHHHHHHhcCCCcceEE
Q 009890 180 IENEYGNIDS-AYG----A----AGKSYIKWAAGMALSLDTGVPWVM 217 (523)
Q Consensus 180 IENEyg~~~~-~~g----~----~~~~y~~~l~~~~~~~g~~vP~~~ 217 (523)
|-||...... .+| . .-+.|++.+.+..|+.+ +.+++.
T Consensus 150 l~NEP~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~IR~~~-~~~I~v 195 (364)
T 1g01_A 150 LANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKG-DNMILV 195 (364)
T ss_dssp CCSCCCSCCTTSCCCCSSHHHHHHHHHHHHHHHHHHHHHC-CCCEEE
T ss_pred cCCCCCcCcCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcC-CcEEEE
Confidence 9999854210 011 0 12457888888999999 887765
|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=2.7e-07 Score=95.71 Aligned_cols=135 Identities=14% Similarity=0.121 Sum_probs=94.9
Q ss_pred ccchHHHHHHHHhCCCCEEEEccccCcCCCC--CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccc
Q 009890 55 PEMWPDLIQKSKDGGLDVIETYVFWNLHEPV--RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWL 132 (523)
Q Consensus 55 ~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~--~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL 132 (523)
+...+++|+.||++|+|+||+.|.|..++|. ++.+|-++...++++|+.|.++||+|||-+-- .+ |+
T Consensus 61 ~~~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~Gi~vildlH~----------~~-~~ 129 (376)
T 3ayr_A 61 PKTTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILNLHH----------ET-WN 129 (376)
T ss_dssp CCCCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCS----------CS-SC
T ss_pred CcCcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCC----------cc-cc
Confidence 4556899999999999999999999988874 56666555568999999999999999998621 11 43
Q ss_pred cCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccccc--ccCc-------ccHHHHHHHH
Q 009890 133 HFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDS--AYGA-------AGKSYIKWAA 203 (523)
Q Consensus 133 ~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~--~~g~-------~~~~y~~~l~ 203 (523)
....+ ..+...+...+++++|++++|++ .++++++|=||...... .+.. .-.+|.+.+.
T Consensus 130 ~~~~~-----~~~~~~~~~~~~w~~ia~~~~~~-------~~~v~~el~NEP~~~~~~~~W~~~~~~~~~~l~~~~~~~~ 197 (376)
T 3ayr_A 130 HAFSE-----TLDTAKEILEKIWSQIAEEFKDY-------DEHLIFEGLNEPRKNDTPVEWTGGDQEGWDAVNAMNAVFL 197 (376)
T ss_dssp CSCTT-----THHHHHHHHHHHHHHHHHHTTTC-------CTTEEEECCSCCCCTTSTTTTTTCCHHHHHHHHHHHHHHH
T ss_pred ccccc-----chHHHHHHHHHHHHHHHHHHcCC-------CceeeEEeecCCCcCCCccccCCccHHHHHHHHHHHHHHH
Confidence 32111 22445666667777887777743 37899999999975321 1221 1235677777
Q ss_pred HHHHhcCCC
Q 009890 204 GMALSLDTG 212 (523)
Q Consensus 204 ~~~~~~g~~ 212 (523)
+..|+.|-.
T Consensus 198 ~aIR~~g~~ 206 (376)
T 3ayr_A 198 KTVRSAGGN 206 (376)
T ss_dssp HHHHTSSTT
T ss_pred HHHHHcCCC
Confidence 888877544
|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A | Back alignment and structure |
|---|
Probab=98.62 E-value=9.5e-08 Score=96.15 Aligned_cols=130 Identities=14% Similarity=0.172 Sum_probs=98.1
Q ss_pred HHHHHHHHhCCCCEEEEccccCcCCC-C-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCC
Q 009890 59 PDLIQKSKDGGLDVIETYVFWNLHEP-V-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIP 136 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~tYvfWn~HEp-~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p 136 (523)
+++|+.||++|+|+||+.+.|..++| . +|.+|.++-..++++|+.|.++||+|||-+=.+ |.|...
T Consensus 34 ~~di~~~~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~gi~vild~h~~----------~~~~g~-- 101 (305)
T 1h1n_A 34 PNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKGAYAVVDPHNY----------GRYYNS-- 101 (305)
T ss_dssp HHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEECCT----------TEETTE--
T ss_pred HHHHHHHHHCCCCEEEecccHHHcCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEecccc----------ccccCC--
Confidence 78999999999999999999999988 3 688998877889999999999999999986321 223211
Q ss_pred CeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCcccHHHHHHHHHHHHhcCC-Ccce
Q 009890 137 GIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDT-GVPW 215 (523)
Q Consensus 137 ~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~-~vP~ 215 (523)
.+.+ .++..+++++|+++++++ ..| ++++=||...... ..-..|++.+.+..|+.|. ..++
T Consensus 102 ---~~~~----~~~~~~~~~~ia~~~~~~-------~~V-~~~l~NEP~~~~~---~~w~~~~~~~~~~IR~~~~~~~~I 163 (305)
T 1h1n_A 102 ---IISS----PSDFETFWKTVASQFASN-------PLV-IFDTDNEYHDMDQ---TLVLNLNQAAIDGIRSAGATSQYI 163 (305)
T ss_dssp ---ECCC----HHHHHHHHHHHHHTSTTC-------TTE-EEECCSCCCSSCH---HHHHHHHHHHHHHHHHTTCCSSCE
T ss_pred ---cCCc----HHHHHHHHHHHHHHhCCC-------CeE-EEeccCCCCCCCH---HHHHHHHHHHHHHHHhcCCCccEE
Confidence 1111 566677888888877743 256 9999999965321 2335788888888888887 7766
Q ss_pred EEc
Q 009890 216 VMC 218 (523)
Q Consensus 216 ~~~ 218 (523)
+..
T Consensus 164 ~v~ 166 (305)
T 1h1n_A 164 FVE 166 (305)
T ss_dssp EEE
T ss_pred EEc
Confidence 653
|
| >1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=98.61 E-value=2.3e-08 Score=107.01 Aligned_cols=110 Identities=15% Similarity=0.073 Sum_probs=92.9
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++++.||++|+|++|+-+.|...+|. +|++|++|-..++++|+.|.++||.+++-. ..-.+|.||.+
T Consensus 58 ~~~~eDi~lm~~~G~~~~R~si~W~ri~P~G~g~~n~~Gl~~y~~~id~l~~~gI~p~vtL--------~h~d~P~~l~~ 129 (449)
T 1qox_A 58 HRVEEDVQLLKDLGVKVYRFSISWPRVLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTL--------YHWDLPQALQD 129 (449)
T ss_dssp SCHHHHHHHHHHHTCSEEEEECCHHHHSTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHHT
T ss_pred hhhHHHHHHHHhcCCCeEEecCcHHHhCcCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEe--------CCCcccHHHHh
Confidence 458999999999999999999999999999 999999999999999999999999999876 24579999987
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
..+- .++...+...+|.+.+++++++ -|..|++-||+..
T Consensus 130 ~ggw----~~r~~~~~f~~ya~~~~~~~gd---------~V~~W~t~NEp~~ 168 (449)
T 1qox_A 130 QGGW----GSRITIDAFAEYAELMFKELGG---------KIKQWITFNEPWC 168 (449)
T ss_dssp TTGG----GSTHHHHHHHHHHHHHHHHHTT---------TCCEEEEEECHHH
T ss_pred cCCC----CCchHHHHHHHHHHHHHHHhCC---------CCceEEEccCCcc
Confidence 5442 2455666667777777777763 3889999999975
|
| >2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=2.2e-08 Score=107.29 Aligned_cols=110 Identities=19% Similarity=0.181 Sum_probs=91.7
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFI 135 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~ 135 (523)
..|+++++.||++|+|++|+-+.|...||.+|++|++|-..++++|+.|.++||.+++-. ..-++|.||.+.
T Consensus 67 ~~~~eDi~lm~~~G~~~~R~sisWsRi~P~~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL--------~H~d~P~~L~~~ 138 (454)
T 2o9p_A 67 HHFKEDVQLMKQLGFLHYRFSVAWPRIMPAAGIINEEGLLFYEHLLDEIELAGLIPMLTL--------YHWDLPQWIEDE 138 (454)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECCHHHHCSSTTCCCHHHHHHHHHHHHHHHHHTCEEEEEE--------ESSCCBHHHHHT
T ss_pred HHHHHHHHHHHhcCCceEEecccHHhhCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe--------cCCCccHHHHhc
Confidence 358999999999999999999999999999999999999999999999999999999876 245789999865
Q ss_pred CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 136 PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 136 p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
.+- .++...+...+|.+.+++++++ -|..|++-||+..
T Consensus 139 ggw----~~r~~~~~F~~ya~~~~~~~gd---------~V~~W~t~NEp~~ 176 (454)
T 2o9p_A 139 GGW----TQRETIQHFKTYASVIMDRFGE---------RINWWNTINEPYC 176 (454)
T ss_dssp TGG----GSTHHHHHHHHHHHHHHHHSSS---------SCSEEEEEECHHH
T ss_pred CCC----CCcchHHHHHHHHHHHHHHhCC---------cceeEEEecCcce
Confidence 332 2355566666777777666652 3889999999875
|
| >1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=2.2e-06 Score=91.93 Aligned_cols=140 Identities=14% Similarity=0.106 Sum_probs=89.6
Q ss_pred CCccchHHHHHHHH-hCCCCEEEEccccCc------CCC--CCc--eeeccCcchHHHHHHHHHHcCCEEEEecCceecc
Q 009890 53 STPEMWPDLIQKSK-DGGLDVIETYVFWNL------HEP--VRN--QYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCA 121 (523)
Q Consensus 53 ~~~~~W~d~l~k~K-a~GlN~V~tYvfWn~------HEp--~~G--~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~a 121 (523)
.-++.|.+.|+.++ ++|++.||+.+.|.- .+| .+| +|+|. .+++|++.|+++||.+++..+
T Consensus 30 ~~r~~~~e~l~~~~~~~G~~~vR~~~~w~D~~~~~~~~~~~~~g~~~~n~~---~~D~~~~~~~~~Gi~p~v~l~----- 101 (503)
T 1w91_A 30 ALQKEYLDHLKLVQEKIGFRYIRGHGLLSDDVGIYREVEIDGEMKPFYNFT---YIDRIVDSYLALNIRPFIEFG----- 101 (503)
T ss_dssp GGBHHHHHHHHHHHHHTCCSEEECSCTTSTTTCCEEEEESSSSEEEEECCH---HHHHHHHHHHHTTCEEEEEEC-----
T ss_pred hhCHHHHHHHHHHHHhcCCeEEEeccCcCCCceEeecccccCCCceeeccH---HHHHHHHHHHHCCCEEEEEEc-----
Confidence 35677899999997 999999999999981 222 356 89997 799999999999999998763
Q ss_pred ccCCCCCCccccCCCCee--------eecCChhHHHHHHHHHHHHHHHHHhcccccccCCc-eE--eccccccccccccc
Q 009890 122 EWNFGGFPLWLHFIPGIQ--------FRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGP-II--LSQIENEYGNIDSA 190 (523)
Q Consensus 122 Ew~~GG~P~WL~~~p~i~--------~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGp-II--~~QIENEyg~~~~~ 190 (523)
..|.|+...++-. -+.+-..|.++++++++.+.++.+ +. |- .|++-||..... .
T Consensus 102 -----~~P~~~~~~~~~~~~w~~~~~~p~~~~~~~~~v~~~~~~~~~ryg---------~~~V~~W~wev~NEp~~~~-~ 166 (503)
T 1w91_A 102 -----FMPKALASGDQTVFYWKGNVTPPKDYNKWRDLIVAVVSHFIERYG---------IEEVRTWLFEVWNEPNLVN-F 166 (503)
T ss_dssp -----SBCGGGBSSCCEETTTTEECSCBSCHHHHHHHHHHHHHHHHHHHC---------HHHHHTSEEEECSCTTSTT-T
T ss_pred -----CCcHHHhCCCCceeecCCCCCCccCHHHHHHHHHHHHHHHHhhcC---------chhhceeeEEEeeCCCCcc-C
Confidence 3788987532110 111223455555544444443322 22 55 679999987531 1
Q ss_pred cC-cccHHHHHHHH---HHHHhcCCCcce
Q 009890 191 YG-AAGKSYIKWAA---GMALSLDTGVPW 215 (523)
Q Consensus 191 ~g-~~~~~y~~~l~---~~~~~~g~~vP~ 215 (523)
++ .....|.+..+ +.+++.+-++.+
T Consensus 167 ~~~~~~~~y~~~~~~~~~~ik~~~P~~~v 195 (503)
T 1w91_A 167 WKDANKQEYFKLYEVTARAVKSVDPHLQV 195 (503)
T ss_dssp SGGGCHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 11 13456776644 445555555544
|
| >2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... | Back alignment and structure |
|---|
Probab=98.52 E-value=7.1e-08 Score=103.67 Aligned_cols=109 Identities=15% Similarity=0.163 Sum_probs=92.8
Q ss_pred chHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCC
Q 009890 57 MWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFI 135 (523)
Q Consensus 57 ~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~ 135 (523)
.|+++|+.||++|+|++|+-+.|...+|. +|++|++|-..++++|+.|.++||.+++-+- .-++|.||.+.
T Consensus 82 ~~~eDi~lm~~~G~~~~R~si~W~Ri~P~G~g~~n~~gl~~yd~lid~l~~~GI~pivtL~--------H~d~P~~l~~~ 153 (468)
T 2j78_A 82 RWKEDIEIIEKLGVKAYRFSISWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIY--------HWDLPFALQLK 153 (468)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEE--------SSCCBHHHHTT
T ss_pred cCHHHHHHHHHcCCCEEEeccCHHHhCCCCCCCcCHHHHHHHHHHHHHHHhcCCEEEEEcc--------CCCCchhhhhc
Confidence 58999999999999999999999999999 9999999999999999999999999998772 45789999865
Q ss_pred CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 136 PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 136 p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
.+. .++...+...+|.+.+++++++ -|..|++=||...
T Consensus 154 ggw----~~~~~~~~F~~ya~~~~~~~gd---------~V~~W~t~NEp~~ 191 (468)
T 2j78_A 154 GGW----ANREIADWFAEYSRVLFENFGD---------RVKNWITLNEPWV 191 (468)
T ss_dssp TGG----GSTTHHHHHHHHHHHHHHHHTT---------TCCEEEEEECHHH
T ss_pred CCC----CChHHHHHHHHHHHHHHHHhCC---------ccceEEEccccch
Confidence 432 3455667777788888888773 4778999999864
|
| >3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} | Back alignment and structure |
|---|
Probab=98.52 E-value=6.1e-08 Score=103.81 Aligned_cols=110 Identities=14% Similarity=0.085 Sum_probs=92.4
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++++.||++|+|++|+-+.|...||. +|++|-.|-..++++|+.|.++||.+++-. ..-++|.||.+
T Consensus 59 ~~~~eDi~lm~~~G~~~~R~si~Wsri~P~G~g~~n~~G~~~y~~lid~l~~~GI~p~vtL--------~h~d~P~~l~~ 130 (453)
T 3ahx_A 59 HRYKEDVQLLKSLGIKSYRFSIAWPRIFPKGFGEINQKGIQFYRDLIDELIKNDIEPAITI--------YHWDLPQKLQD 130 (453)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCHHHHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHHT
T ss_pred HHHHHHHHHHHHhCCCeEecccCHHHhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe--------cCCCccHhHhh
Confidence 458999999999999999999999999999 999997777799999999999999999876 24689999987
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
..+- .++...+...+|.+.+++++++ -|..|++-||+..
T Consensus 131 ~ggw----~~r~~~~~f~~ya~~~~~~~gd---------~V~~W~t~NEp~~ 169 (453)
T 3ahx_A 131 IGGW----ANPQVADYYVDYANLLFREFGD---------RVKTWITHNEPWV 169 (453)
T ss_dssp TTGG----GSHHHHHHHHHHHHHHHHHHTT---------TCCEEEEEECHHH
T ss_pred CCCC----CCchHHHHHHHHHHHHHHHhCC---------ccceEEEccCcch
Confidence 5442 2455666677777777777763 3889999999975
|
| >1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=98.48 E-value=5.9e-08 Score=104.18 Aligned_cols=110 Identities=12% Similarity=0.122 Sum_probs=90.6
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCC--ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVR--NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH 133 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~--G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~ 133 (523)
..|+++++.||++|+|++|+-+.|...+|.+ |++|++|-...+++|+.+.++||.+++-+ ..-.+|.||.
T Consensus 59 ~~~~eDi~lm~~~G~~~~R~sisWsRi~P~g~~g~~n~~Gl~~y~~~id~l~~~GI~p~vtL--------~H~d~P~~L~ 130 (464)
T 1wcg_A 59 HKYKEDVAIIKDLNLKFYRFSISWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTM--------YHWDLPQYLQ 130 (464)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCHHHHSTTSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHH
T ss_pred HhhHHHHHHHHHhCCCeEEecccHHHhCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe--------CCCCCCcchh
Confidence 4589999999999999999999999999998 99999999999999999999999999876 2567899998
Q ss_pred CCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 134 FIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 134 ~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
+..+- -++...+.-.+|.+.+++++++ -|..|+.-||+..
T Consensus 131 ~~ggw----~~r~~~~~f~~ya~~~~~~~gd---------~V~~W~t~NEp~~ 170 (464)
T 1wcg_A 131 DLGGW----VNPIMSDYFKEYARVLFTYFGD---------RVKWWITFNEPIA 170 (464)
T ss_dssp HTTGG----GSTTHHHHHHHHHHHHHHHHTT---------TCCEEEEEECHHH
T ss_pred hcCCC----CChhHHHHHHHHHHHHHHHhCC---------cCcEEEEccccch
Confidence 74332 2334555556666667776662 3889999999874
|
| >2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X* | Back alignment and structure |
|---|
Probab=98.47 E-value=8.4e-08 Score=103.13 Aligned_cols=110 Identities=15% Similarity=0.123 Sum_probs=91.7
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCC--ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVR--NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH 133 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~--G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~ 133 (523)
..|+++++.||++|+|++|+-+-|...+|.+ |++|++|-...+++|+.+.++||.+++-. ..-.+|.||.
T Consensus 57 ~~~~eDi~lm~~~G~~~~R~sisWsRi~P~g~~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL--------~H~d~P~~l~ 128 (469)
T 2e9l_A 57 TLWEEDLKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTL--------YHFDLPQTLE 128 (469)
T ss_dssp TCHHHHHHHHHHHTCSEEEEECCHHHHSTTSSTTSCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHH
T ss_pred HHHHHHHHHHHHhCCCeEEccccHhhcccCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe--------CCCCCCcchh
Confidence 5589999999999999999999999999998 99999999999999999999999998876 2567899998
Q ss_pred CCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 134 FIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 134 ~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
+..+- .++...+...+|.+.+++++++ -|..|+.-||+..
T Consensus 129 ~~ggw----~~r~~~~~f~~ya~~~~~~~gd---------~V~~W~t~NEp~~ 168 (469)
T 2e9l_A 129 DQGGW----LSEAIIESFDKYAQFCFSTFGD---------RVKQWITINEANV 168 (469)
T ss_dssp HTTGG----GSTHHHHHHHHHHHHHHHHHTT---------TCCEEEEESCHHH
T ss_pred hcCCC----CCchHHHHHHHHHHHHHHHhcC---------cCCEEEEccCcch
Confidence 65332 2344556666677777777763 3889999999875
|
| >3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=98.43 E-value=1.7e-07 Score=100.72 Aligned_cols=114 Identities=18% Similarity=0.181 Sum_probs=92.3
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCCc---eee---------------------------ccCcchHHHHHHHHH
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVRN---QYN---------------------------FEGRYDLVKFVKLVA 105 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G---~yd---------------------------F~G~~dL~~fl~la~ 105 (523)
..|+++++.||++|+|++++-+-|...+|.+| ++| -+|-...+++|+.++
T Consensus 60 ~~y~eDi~l~~~lG~~~~R~si~WsRI~P~~g~~~~~n~~~~~~~~~~~~~~~~~~l~~l~~~an~~g~~~Y~~~id~l~ 139 (473)
T 3apg_A 60 HLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWK 139 (473)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCHHHHCCSCCTTSCCEEEECTTSCEEEEECCHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCCEEEEecchhhccccCCCCCCcccccccccccccccchhhHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999999 999 555668999999999
Q ss_pred HcCCEEEEecCceeccccCCCCCCccccCCCCeeee---------cCChhHHHHHHHHHHHHHHHHHhcccccccCCceE
Q 009890 106 EAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFR---------TDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPII 176 (523)
Q Consensus 106 ~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~R---------t~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII 176 (523)
++||.+++-. ....+|.||.+.+.+ .+ --++....+..+|.+.+++++++ -|.
T Consensus 140 ~~Gi~pivtL--------~H~~lP~wl~d~~~~-~~~~~~~~~~Gw~~~~~v~~F~~ya~~~~~~~gd---------~V~ 201 (473)
T 3apg_A 140 ERGKTFILNL--------YHWPLPLWIHDPIAV-RKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDD---------LVD 201 (473)
T ss_dssp TTTCEEEEES--------CCSCCCTTTBCHHHH-HHHCTTSSCBGGGSHHHHHHHHHHHHHHHHHHGG---------GCS
T ss_pred HCCCEEEEEe--------CCCCCCHHHHhCCCc-cccccCCccCCCCCccHHHHHHHHHHHHHHHhCC---------cce
Confidence 9999999987 356899999874311 11 12455666667777777777773 288
Q ss_pred ecccccccccc
Q 009890 177 LSQIENEYGNI 187 (523)
Q Consensus 177 ~~QIENEyg~~ 187 (523)
+|++-||++..
T Consensus 202 ~W~t~NEp~~~ 212 (473)
T 3apg_A 202 MWSTMNEPNVV 212 (473)
T ss_dssp EEEEEECHHHH
T ss_pred EEEEecCcchh
Confidence 99999999753
|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=98.40 E-value=8e-07 Score=91.73 Aligned_cols=138 Identities=9% Similarity=0.090 Sum_probs=101.1
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCC--CCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEP--VRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH 133 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp--~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~ 133 (523)
..=.+.++.||+.|+|+||+.|.|..++| .+|.+|-++...++++|+.|.++||+|||-+= ..|.|-.
T Consensus 43 ~~t~~m~~~i~~~G~N~vRipi~w~~~~~~~~~g~~~~~~l~~ld~vV~~a~~~Gi~vIlDlH----------~~~~~~g 112 (340)
T 3qr3_A 43 DGIGQMQHFVNEDGMTIFRLPVGWQYLVNNNLGGNLDSTSISKYDQLVQGCLSLGAYCIVDIH----------NYARWNG 112 (340)
T ss_dssp CHHHHHHHHHHHHCCCEEEEEECHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEEC----------STTEETT
T ss_pred ccHHHHHHHHHHCCCCEEEEEeeHHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEec----------CCcccCC
Confidence 34466778899999999999999999998 47888877777899999999999999999862 1111211
Q ss_pred CCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCcccHHHHHHHHHHHHhcCCC-
Q 009890 134 FIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTG- 212 (523)
Q Consensus 134 ~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~- 212 (523)
. .-.+++...+...+++++|++++|.+ ..|| +.|=||.-... ...=.+|.+.+.+..|+.|..
T Consensus 113 ~-----~~~~~~~~~~~~~~~w~~iA~ryk~~-------~~Vi-~el~NEP~~~~---~~~w~~~~~~~i~aIR~~~~~~ 176 (340)
T 3qr3_A 113 G-----IIGQGGPTNAQFTSLWSQLASKYASQ-------SRVW-FGIMNEPHDVN---INTWAATVQEVVTAIRNAGATS 176 (340)
T ss_dssp E-----ETTTTSSCHHHHHHHHHHHHHHHTTC-------TTEE-EECCSCCCSSC---HHHHHHHHHHHHHHHHHTTCCS
T ss_pred c-----ccCCCHHHHHHHHHHHHHHHHHhCCC-------CcEE-EEecCCCCCCC---HHHHHHHHHHHHHHHHhhCCCc
Confidence 1 11123445778888999999999843 2565 99999986431 123357788888889998888
Q ss_pred cceEEcc
Q 009890 213 VPWVMCQ 219 (523)
Q Consensus 213 vP~~~~~ 219 (523)
.+++...
T Consensus 177 ~~Iiv~g 183 (340)
T 3qr3_A 177 QFISLPG 183 (340)
T ss_dssp SCEEEEC
T ss_pred cEEEEeC
Confidence 6666543
|
| >1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A | Back alignment and structure |
|---|
Probab=98.40 E-value=1.3e-07 Score=102.58 Aligned_cols=113 Identities=16% Similarity=0.155 Sum_probs=90.6
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCC---ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVR---NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWL 132 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~---G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL 132 (523)
..|+++++.||++|+|++|+-+-|...+|.+ |++|-.|-..++++|+.+.++||.+++-. ..-.+|.||
T Consensus 78 ~~~~eDi~lm~~~G~~~~R~sisWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL--------~H~d~P~~L 149 (512)
T 1v08_A 78 HMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTI--------FHWDVPQAL 149 (512)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCHHHHSTTSSTTTCCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHH
T ss_pred HHHHHHHHHHHHhCCCeEecccCHhhhCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe--------CCCCCCHHH
Confidence 3699999999999999999999999999998 99997777799999999999999999876 255789999
Q ss_pred cCC-CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 133 HFI-PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 133 ~~~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
.+. ++-.-|. +-...+...+|.+.+++++++ -|..|++-||++.
T Consensus 150 ~~~yggw~~r~-~c~~~~~f~~ya~~~~~~~gd---------~V~~W~t~NEp~~ 194 (512)
T 1v08_A 150 EEKYGGFLDKS-HKSIVEDYTYFAKVCFDNFGD---------KVKNWLTFNDPQT 194 (512)
T ss_dssp HHHHCGGGCTT-SSHHHHHHHHHHHHHHHHHTT---------TCCEEEEEECHHH
T ss_pred HhhCCCCCCcc-ccchHHHHHHHHHHHHHHhCC---------cceEEEEcccchh
Confidence 864 5542221 114555566667777766662 3899999999874
|
| >1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=98.35 E-value=2.8e-07 Score=99.27 Aligned_cols=113 Identities=22% Similarity=0.187 Sum_probs=90.8
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCCc------------------eee------------ccCcchHHHHHHHHH
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVRN------------------QYN------------FEGRYDLVKFVKLVA 105 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G------------------~yd------------F~G~~dL~~fl~la~ 105 (523)
..|+++++.||++|+|++|+-+-|...+|.+| ++| -.|-...+++|+.+.
T Consensus 60 ~~y~eDi~lm~~~G~~~~R~sisWsRi~P~~g~~~~~~v~~~~~~~~~~~~~n~~~~~~l~~~~n~~g~~~Y~~~id~l~ 139 (481)
T 1qvb_A 60 NLNQNDHDLAEKLGVNTIRVGVEWSRIFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVNHYVEMYKDWV 139 (481)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCHHHHCSSCCTTSCCCEEECTTSCEEEECCCHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCccEeccchhhhCCCCCCCccccccccccccccccccccccchhhhhhhcHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999998 888 777778999999999
Q ss_pred HcCCEEEEecCceeccccCCCCCCccccCCCCeeee----------cCChhHHHHHHHHHHHHHHHHHhcccccccCCce
Q 009890 106 EAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFR----------TDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPI 175 (523)
Q Consensus 106 ~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~R----------t~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpI 175 (523)
++||.+++-+ ....+|.||.+. + ..| -.|+...++-.+|.+.+++++++ -|
T Consensus 140 ~~Gi~p~vtL--------~H~~lP~~L~~~-~-~~~~~~~~~~~gGw~n~~~~~~F~~ya~~~~~~~gd---------~V 200 (481)
T 1qvb_A 140 ERGRKLILNL--------YHWPLPLWLHNP-I-MVRRMGPDRAPSGWLNEESVVEFAKYAAYIAWKMGE---------LP 200 (481)
T ss_dssp TTTCEEEEES--------CCSCCBTTTBCH-H-HHHHHCGGGSCBGGGSTHHHHHHHHHHHHHHHHHTT---------SC
T ss_pred HCCCEEEEEe--------CCCCCCHHHHhc-C-CcccccccccCCCcCCchHHHHHHHHHHHHHHHhCC---------Cc
Confidence 9999999987 356799999862 2 011 02344566666777777777762 38
Q ss_pred Eecccccccccc
Q 009890 176 ILSQIENEYGNI 187 (523)
Q Consensus 176 I~~QIENEyg~~ 187 (523)
.+|++-||++..
T Consensus 201 ~~W~t~NEp~~~ 212 (481)
T 1qvb_A 201 VMWSTMNEPNVV 212 (481)
T ss_dssp SEEEEEECHHHH
T ss_pred cEEEEecccchh
Confidence 999999998753
|
| >3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=4.3e-07 Score=93.55 Aligned_cols=155 Identities=15% Similarity=0.188 Sum_probs=114.4
Q ss_pred EEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEE--ccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCcee
Q 009890 42 VLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIET--YVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYV 119 (523)
Q Consensus 42 ~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~t--YvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi 119 (523)
|+++.+++..+ +.+. +++-...+|.|.. -+-|...||+||+|||+ .++++++.|+++||.|...+ .+
T Consensus 15 F~~G~av~~~~-----l~~~-~~~~~~~Fn~~t~eN~mKW~~iep~~G~~~f~---~~D~~v~~a~~~gi~vrgHt--Lv 83 (331)
T 3emz_A 15 FKIGAAVHTRM-----LQTE-GEFIAKHYNSVTAENQMKFEEVHPREHEYTFE---AADEIVDFAVARGIGVRGHT--LV 83 (331)
T ss_dssp CEEEEEECHHH-----HHHH-HHHHHHHCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHTTTCEEEECC--SB
T ss_pred CeEEEEcChhh-----cCcH-HHHHHHhCCEEEECcccchhhhcCCCCccChh---HHHHHHHHHHHCCCEEeeee--ee
Confidence 57888886533 3333 4455567999888 67799999999999999 89999999999999985433 11
Q ss_pred ccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccc--------c
Q 009890 120 CAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSA--------Y 191 (523)
Q Consensus 120 ~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~--------~ 191 (523)
|- ...|.|+...+.- -..+.+..+++++++++.++.+++ |-|..|-|-||.-+.... +
T Consensus 84 ---Wh-~q~P~W~~~~~~g-~~~~~~~l~~~~~~~I~~v~~rYk---------g~i~~WDVvNE~~~~~~~~~~r~s~~~ 149 (331)
T 3emz_A 84 ---WH-NQTPAWMFEDASG-GTASREMMLSRLKQHIDTVVGRYK---------DQIYAWDVVNEAIEDKTDLIMRDTKWL 149 (331)
T ss_dssp ---CS-SSCCGGGGBCTTS-SBCCHHHHHHHHHHHHHHHHHHTT---------TTCSEEEEEECCBCSSTTCCBCCCHHH
T ss_pred ---cc-ccCcHhHhccccC-CCCCHHHHHHHHHHHHHHHHHHhC---------CCceEEEEeccccCCCCCccccCCchh
Confidence 32 3689999753210 011334678889999999988877 479999999997542211 1
Q ss_pred CcccHHHHHHHHHHHHhcCCCcceEEccCC
Q 009890 192 GAAGKSYIKWAAGMALSLDTGVPWVMCQQS 221 (523)
Q Consensus 192 g~~~~~y~~~l~~~~~~~g~~vP~~~~~~~ 221 (523)
..-|.+|+..+-+.|++.+.++.+++++-+
T Consensus 150 ~~lG~~~i~~aF~~Ar~adP~a~L~~NDyn 179 (331)
T 3emz_A 150 RLLGEDYLVQAFNMAHEADPNALLFYNDYN 179 (331)
T ss_dssp HHTCTTHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred hhcCHHHHHHHHHHHHhhCCCceEEecccc
Confidence 124678999999999999999999998753
|
| >1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A | Back alignment and structure |
|---|
Probab=98.32 E-value=1e-06 Score=90.56 Aligned_cols=109 Identities=21% Similarity=0.259 Sum_probs=82.6
Q ss_pred HHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCee
Q 009890 60 DLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQ 139 (523)
Q Consensus 60 d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~ 139 (523)
+.++.||+.|+|+||+.+ | .+|.+|.+|++ .+.+.++.|+++||.|+|-+ .| . +...-|.|... |+-.
T Consensus 31 ~~~~ilk~~G~n~vRlri-~--v~P~~g~~d~~---~~~~~~~~ak~~Gl~v~ld~-hy-s---d~wadP~~q~~-p~~W 98 (334)
T 1fob_A 31 ALETILADAGINSIRQRV-W--VNPSDGSYDLD---YNLELAKRVKAAGMSLYLDL-HL-S---DTWADPSDQTT-PSGW 98 (334)
T ss_dssp CHHHHHHHHTCCEEEEEE-C--SCCTTCTTCHH---HHHHHHHHHHHTTCEEEEEE-CC-S---SSCCBTTBCBC-CTTS
T ss_pred hHHHHHHHcCCCEEEEEE-E--ECCCCCccCHH---HHHHHHHHHHHCCCEEEEEe-cc-C---CCCCCcccccC-cccc
Confidence 679999999999999988 4 78999988877 78888888999999999975 22 1 22334777654 3211
Q ss_pred eecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 140 FRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 140 ~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
...+-+...+++.+|.+.+++.+++ +|-.+.++||-||...
T Consensus 99 ~~~~~~~~~~~~~~yt~~v~~~l~~------~g~~v~~v~vGNE~~~ 139 (334)
T 1fob_A 99 STTDLGTLKWQLYNYTLEVCNTFAE------NDIDIEIISIGNEIRA 139 (334)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHH------TTCCCSEEEESSSGGG
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHh------CCCCCCEEEEeecCcc
Confidence 2223356888999999999999984 3446789999999754
|
| >1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=3.2e-07 Score=98.07 Aligned_cols=110 Identities=17% Similarity=0.133 Sum_probs=90.8
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++++.||++|+|++|+-+.|...+|. +|++|-.|-...+++|+.|.++||.+++-. ..-.+|.||.+
T Consensus 58 h~y~eDi~lm~~~G~~~~R~si~W~Ri~P~G~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL--------~H~d~P~~l~~ 129 (447)
T 1e4i_A 58 HRYEEDIRLMKELGIRTYRFSVSWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTL--------YHWDLPQALQD 129 (447)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHHH
T ss_pred hccHHHHHHHHHcCCCeEEecCcHHHhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe--------CCCcccHHHHh
Confidence 348999999999999999999999999999 999998888899999999999999999876 24568999986
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
..+- .++...+...+|.+.+++++++ -|..|++=||+..
T Consensus 130 ~ggw----~~r~~~~~F~~ya~~~~~~~gd---------~V~~W~t~NEp~~ 168 (447)
T 1e4i_A 130 AGGW----GNRRTIQAFVQFAETMFREFHG---------KIQHWLTFNEPWC 168 (447)
T ss_dssp TTTT----SSTHHHHHHHHHHHHHHHHTBT---------TBCEEEEEECHHH
T ss_pred cCCC----CCchhHHHHHHHHHHHHHHhCC---------cceeEEEecCccc
Confidence 4432 2455666666777777777763 3889999999875
|
| >2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ... | Back alignment and structure |
|---|
Probab=98.32 E-value=2.9e-05 Score=84.02 Aligned_cols=334 Identities=14% Similarity=0.149 Sum_probs=194.1
Q ss_pred EEEEEEEEEeeC------CCCCccchHHHHHHH---HhCCCCEEEEccc--------cCcCC----CCCceeeccCc--c
Q 009890 39 KRRVLISGSIHY------PRSTPEMWPDLIQKS---KDGGLDVIETYVF--------WNLHE----PVRNQYNFEGR--Y 95 (523)
Q Consensus 39 k~~~l~sG~iHy------~R~~~~~W~d~l~k~---Ka~GlN~V~tYvf--------Wn~HE----p~~G~ydF~G~--~ 95 (523)
+.+.=++|++.- ..++++..+++|+.+ +.+|++.+|+-+- |...+ +.-+.|+++.+ .
T Consensus 76 Q~i~GFG~s~t~~~a~~l~~l~~~~r~~ll~~lF~~~Glglsi~R~~IG~~d~s~~~ysy~d~~~D~~l~~f~~~~d~~~ 155 (497)
T 2nt0_A 76 QKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTK 155 (497)
T ss_dssp EECCEEEEECCHHHHHHHHTSCHHHHHHHHHHHHSTTTTCCCEEEEEESCCSSSSSCCCSCCSTTCTTCTTCCCCHHHHT
T ss_pred eEEeEEeeehhHHHHHHHHhCCHHHHHHHHHHhcCCCCCceEEEEEeecCCCCCCCCccccCCCCCcccCCCCcCccchh
Confidence 455568888752 345777777776666 4589999999882 22322 22256776644 2
Q ss_pred hHHHHHHHHHHc---CCEEEEecCceeccccCCCCCCccccCCCC----eeeecC-ChhHHHHHHHHHHHHHHHHHhccc
Q 009890 96 DLVKFVKLVAEA---GLYAHLRIGPYVCAEWNFGGFPLWLHFIPG----IQFRTD-NEPFKAEMQRFTAKIVDMMKQEKL 167 (523)
Q Consensus 96 dL~~fl~la~~~---GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~----i~~Rt~-d~~fl~~~~~~~~~i~~~ik~~~l 167 (523)
....+|+.|++. +|+++.-| | ..|.|+..... -.++.. ++.|.+....|+.+.++.++++++
T Consensus 156 ~~i~~lk~A~~~~~~~lki~asp-------W---SpP~wMk~n~~~~ggG~L~~~~~~~~y~~yA~Ylvk~i~~y~~~Gi 225 (497)
T 2nt0_A 156 LKIPLIHRALQLAQRPVSLLASP-------W---TSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKL 225 (497)
T ss_dssp THHHHHHHHHHHCSSCCEEEEEE-------S---CCCGGGBTTCSSSSSCBBSSCTTSHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHhhCCCCcEEEEec-------C---CCcHHHhcCCCcCCCCccCCccchhHHHHHHHHHHHHHHHHHHcCC
Confidence 577899999886 58887765 3 47999985432 134432 334778888888888888886655
Q ss_pred ccccCCceEeccccccccccc--------cccC-cccHHHHH-HHHHHHHhcCC-CcceEEccCC--CCCC---cccc--
Q 009890 168 YASQGGPIILSQIENEYGNID--------SAYG-AAGKSYIK-WAAGMALSLDT-GVPWVMCQQS--DAPD---PIIN-- 229 (523)
Q Consensus 168 ~~~~gGpII~~QIENEyg~~~--------~~~g-~~~~~y~~-~l~~~~~~~g~-~vP~~~~~~~--~~p~---~vi~-- 229 (523)
+|=++-+-||..... +.+. +...++++ .|....++.|+ ++-++.++.. +.++ .++.
T Consensus 226 ------~i~~is~qNEP~~~~~~~~~~~s~~~t~~~~~~fik~~L~p~L~~~gl~~~kI~~~D~n~~~~~~~~~~~l~d~ 299 (497)
T 2nt0_A 226 ------QFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDP 299 (497)
T ss_dssp ------CCSEEESCSSGGGGGSTTCCSSCCBCCHHHHHHHHHHTHHHHHHTSTTTTSEEEEEEEEGGGTTHHHHHHHTSH
T ss_pred ------CeeEEeeccCCCcccCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhcCCCCceEEEecCCCCcchhHHHHHhcCh
Confidence 777777789986531 1111 12357777 78888888888 7778877743 2221 1121
Q ss_pred ----CCC--Cccc--CC-------CC---CCCCCCCceEeeecccc--ccccCCCCCCCCHHHHHHHHHHHHhcCCeeee
Q 009890 230 ----TCN--GFYC--DQ-------FT---PNSNNKPKMWTENWSGW--FLSFGGAVPYRPVEDLAFAVARFFQRGGTFQN 289 (523)
Q Consensus 230 ----~~n--g~~~--~~-------~~---~~~~~~P~~~tE~~~Gw--f~~wG~~~~~r~~~d~~~~~~~~~~~g~s~~n 289 (523)
... +++| +. +. ...|+++.+.||...|. ++.+.+...-..+++++..+..-+..+.+..-
T Consensus 300 ~a~~~v~~ia~H~Y~~~~~~~~~~l~~~~~~~p~k~lw~TE~~~~~~~~~~~~~~~~w~~a~~~a~~ii~~l~~~~~~~~ 379 (497)
T 2nt0_A 300 EAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWT 379 (497)
T ss_dssp HHHTTCCEEEEEEETTSCCCHHHHHHHHHHHCTTSEEEEEEEECCCSTTSCSCCTTCHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred hhHhhcceEEEEecCCCCCChHHHHHHHHHHCCCCcEEEecccCCCCCccCCCCcCcHHHHHHHHHHHHHHHhhcceeeE
Confidence 111 2222 11 11 23578999999987552 11111111112345566555555665543222
Q ss_pred eee----eccCCCCCCCCCCCcccccccCCCCC--Cc-CCCC-CChhHHHHHHHHHHHHHhhhcccCCCCCCCCCCCCce
Q 009890 290 YYM----YHGGTNFDRTSGGPFISTSYDYDAPL--DE-YGLI-RQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLE 361 (523)
Q Consensus 290 yYM----~hGGTNfG~~~G~~~~~TSYDy~Api--~E-~G~~-~~pKy~~lk~lh~~i~~~~~~L~~~~~~~~~lg~~~~ 361 (523)
+.. ..||.|||.. + -++|| ++ .|.+ .+|.|..+....+||+.-...+.... +...+..
T Consensus 380 ~Wnl~ld~~ggp~~~~n----~------~~~~i~v~~~~g~~~~~~~yY~~~hfSkfirPGa~rI~~~~----~~~~~l~ 445 (497)
T 2nt0_A 380 DWNLALNPEGGPNWVRN----F------VDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVA----SQKNDLD 445 (497)
T ss_dssp EEESEECTTSCCCSSCC----C------CCCSEEEEGGGTEEEECHHHHHHHHHHTTCCTTCEEEEEEE----SSCCSEE
T ss_pred eeeeeecCCCCCCCCCC----c------cCceEEEeCCCCeEEECHHHHHHHhhhcccCCCCEEEEecc----CCCCceE
Confidence 211 1477887631 0 11222 11 2322 36899999999999874333332110 1112356
Q ss_pred EEEEEcCCCceEEEEEeCCC-CeeEEEEEC-C--eEEEecCeeEE
Q 009890 362 ATVYKTGSGLCSAFLANIGT-NSDVTVKFN-G--NSYLLPAWSVS 402 (523)
Q Consensus 362 ~~v~~~~~~~~~~Fl~N~~~-~~~~~V~f~-~--~~~~lp~~svs 402 (523)
+..|.+.+|.-++-+.|..+ ...++|... + .+++|||.||.
T Consensus 446 ~~Af~npdg~~vvV~~N~~~~~~~~~v~~~~~~~~~~~lpa~Sv~ 490 (497)
T 2nt0_A 446 AVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIH 490 (497)
T ss_dssp EEEEECTTSCEEEEEEECSSSCEEEEEEETTTEEEEEEECTTEEE
T ss_pred EEEEECCCCCEEEEEEeCCCCCEEEEEEeCCCCEEEEEECCCeEE
Confidence 66787766666666677553 345566664 3 27899999984
|
| >1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=2.9e-07 Score=99.65 Aligned_cols=110 Identities=10% Similarity=0.090 Sum_probs=91.2
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCC---ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVR---NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWL 132 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~---G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL 132 (523)
..|+++++.||++|+|++|+-+-|...+|.+ |++|..|-...+++|+.+.++||.+++-. ..-.+|.||
T Consensus 77 ~~~~eDi~lm~~lG~~~~R~sisWsRi~P~g~~~g~~n~~G~~~y~~~id~l~~~GI~p~vtL--------~H~d~P~~L 148 (501)
T 1e4m_M 77 SYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTL--------FHWDLPQTL 148 (501)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCHHHHCTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHH
T ss_pred HHHHHHHHHHHHhCCCeEEccccHHhhccCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe--------CCCcCCHHH
Confidence 4699999999999999999999999999997 99998888899999999999999998876 256799999
Q ss_pred cCC-CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 133 HFI-PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 133 ~~~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
.+. ++- -++...+...+|.+.+++++++ -|..|+.-||+..
T Consensus 149 ~~~yggw----~~r~~~~~f~~ya~~~~~~~gd---------~V~~W~t~NEp~~ 190 (501)
T 1e4m_M 149 QDEYEGF----LDPQIIDDFKDYADLCFEEFGD---------SVKYWLTINQLYS 190 (501)
T ss_dssp HHHHCGG----GSTHHHHHHHHHHHHHHHHHTT---------TCCEEEEESCTTH
T ss_pred HHhcCCC----CCchHHHHHHHHHHHHHHHhCC---------CCCEEEEecCchh
Confidence 874 654 2344556666666677666662 3889999999875
|
| >1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A | Back alignment and structure |
|---|
Probab=98.31 E-value=4.1e-07 Score=96.86 Aligned_cols=110 Identities=15% Similarity=0.129 Sum_probs=91.6
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCC-ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVR-NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~-G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++|+.||++|+|++|+-+.|...+|.+ |++|-.|-..++++|+.|.++||.+++-+ ..-++|.||.+
T Consensus 57 ~~~~eDi~lm~~~G~~~~R~si~W~Ri~P~g~g~~n~~gl~~y~~~id~l~~~GI~p~vtL--------~H~d~P~~l~~ 128 (431)
T 1ug6_A 57 RRYEEDIALMQSLGVRAYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTL--------YHWDLPLALEE 128 (431)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHHT
T ss_pred hhhHHHHHHHHHcCCCEEEcccCHHHcccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe--------CCCCCCcchhh
Confidence 3489999999999999999999999999997 99997777799999999999999999876 25678999987
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
..+- .++...+...+|.+.+++++++ -|..|++=||+..
T Consensus 129 ~ggw----~~~~~~~~F~~ya~~~~~~~gd---------~V~~W~t~NEp~~ 167 (431)
T 1ug6_A 129 RGGW----RSRETAFAFAEYAEAVARALAD---------RVPFFATLNEPWC 167 (431)
T ss_dssp TTGG----GSHHHHHHHHHHHHHHHHHHTT---------TCCEEEEEECHHH
T ss_pred cCCC----CChHHHHHHHHHHHHHHHHhcC---------CCceEEEecCcch
Confidence 5332 3456667777777788777773 3789999999865
|
| >2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.30 E-value=4.5e-05 Score=81.42 Aligned_cols=329 Identities=10% Similarity=0.123 Sum_probs=185.6
Q ss_pred EEEEEEEEEee------CCCCCccchHHHHHHHH---hCCCCEEEEccc---cC-----cCC----CCCceeeccCcc-h
Q 009890 39 KRRVLISGSIH------YPRSTPEMWPDLIQKSK---DGGLDVIETYVF---WN-----LHE----PVRNQYNFEGRY-D 96 (523)
Q Consensus 39 k~~~l~sG~iH------y~R~~~~~W~d~l~k~K---a~GlN~V~tYvf---Wn-----~HE----p~~G~ydF~G~~-d 96 (523)
+.+.=++|++- ....+++..+++|+.+= .+|++.+|+-+- ++ +-+ |..+.|+++.+. .
T Consensus 43 Q~i~GfG~s~t~~~a~~l~~l~~~~r~~il~~lF~~~Glglsi~R~~IG~~d~s~~~ysy~d~~~d~~l~~f~~~~d~~~ 122 (447)
T 2wnw_A 43 QQIDGFGGSFTEGAGVVFNSMSEKTKAQFLSLYFSAQEHNYTLARMPIQSCDFSLGNYAYVDSSADLQQGRLSFSRDEAH 122 (447)
T ss_dssp EECCCEEEECCHHHHHHHHTSCHHHHHHHHHHHHCTTTTCCCEEEEEESCCSSSSSCCCSCCSHHHHHTTCCCCHHHHHH
T ss_pred eEEeEEEehhhHHHHHHHHhCCHHHHHHHHHHHhccCCCceEEEEEeecCCCCCCCcccccCCCCCCccccCCcccchhH
Confidence 33444777652 23457777777777662 479999999873 22 222 223556664322 3
Q ss_pred HHHHHHHHHHc--CCEEEEecCceeccccCCCCCCccccCCCCee-eecCChhHHHHHHHHHHHHHHHHHhcccccccCC
Q 009890 97 LVKFVKLVAEA--GLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQ-FRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGG 173 (523)
Q Consensus 97 L~~fl~la~~~--GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~-~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gG 173 (523)
+..+|+.|++. +|.++.-| | ..|.|+.....+. -..-.+.|.+....|+.+.++.++++++
T Consensus 123 ~~~~lk~A~~~~~~l~i~asp-------W---SpP~wMk~n~~~~~gg~L~~~~y~~yA~Ylvk~i~~y~~~Gi------ 186 (447)
T 2wnw_A 123 LIPLISGALRLNPHMKLMASP-------W---SPPAFMKTNNDMNGGGKLRRECYADWADIIINYLLEYRRHGI------ 186 (447)
T ss_dssp THHHHHHHHHHCTTCEEEEEE-------S---CCCGGGBTTSCSBSCCBBCGGGHHHHHHHHHHHHHHHHHTTC------
T ss_pred HHHHHHHHHHhCCCcEEEEec-------C---CCcHHhccCCCcCCCCcCCHHHHHHHHHHHHHHHHHHHHcCC------
Confidence 47799999984 57776655 3 4799998643221 0112356778888888888888886655
Q ss_pred ceEecccccccccccc----ccC-cccHHHHH-HHHHHHHhcCC-CcceEEccCCC--CC---Ccccc------CCC--C
Q 009890 174 PIILSQIENEYGNIDS----AYG-AAGKSYIK-WAAGMALSLDT-GVPWVMCQQSD--AP---DPIIN------TCN--G 233 (523)
Q Consensus 174 pII~~QIENEyg~~~~----~~g-~~~~~y~~-~l~~~~~~~g~-~vP~~~~~~~~--~p---~~vi~------~~n--g 233 (523)
+|=++-+-||...... .+. +...++++ .|....++.|+ ++-++.++... .+ ..++. ... +
T Consensus 187 ~i~~is~qNEP~~~~~~~s~~~t~~~~~~fik~~L~p~l~~~gl~~~kI~~~D~n~~~~~~~~~~il~d~~a~~~v~~ia 266 (447)
T 2wnw_A 187 NVQALSVQNEPVAVKTWDSCLYSVEEETAFAVQYLRPRLARQGMDEMEIYIWDHDKDGLVDWAELAFADEANYKGINGLA 266 (447)
T ss_dssp CCCEEESCSSTTCCCSSBCCBCCHHHHHHHHHHTHHHHHHHTTCTTCEEEEEEEEGGGHHHHHHHHTTSHHHHHHCCEEE
T ss_pred CeeEEeeeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEEeCCCccchhhHHHHHhcCHhHHhhCCEEE
Confidence 7778888899875311 111 22356776 78888888888 57777666432 11 11221 111 1
Q ss_pred ccc--CCC-C------CCCCCCCceEeeeccccccccCCCCCC-CCHHHHHHHHHHHHhcCCeeeeeeeec----cCCCC
Q 009890 234 FYC--DQF-T------PNSNNKPKMWTENWSGWFLSFGGAVPY-RPVEDLAFAVARFFQRGGTFQNYYMYH----GGTNF 299 (523)
Q Consensus 234 ~~~--~~~-~------~~~~~~P~~~tE~~~Gwf~~wG~~~~~-r~~~d~~~~~~~~~~~g~s~~nyYM~h----GGTNf 299 (523)
++| ..- . ...|+++.+.||...+- |....+. .+-++++..+..-+..+.+..-+.... ||.|+
T Consensus 267 ~H~Y~g~~~~~l~~~~~~~p~k~lw~TE~~~~~---~~~~~~~~g~w~~~a~~ii~~~~~~~~~~~~Wnl~ld~~ggpn~ 343 (447)
T 2wnw_A 267 FHWYTGDHFSQIQYLAQCLPDKKLLFSEGCVPM---ESDAGSQIRHWHTYLHDMIGNFKSGCSGFIDWNLLLNSEGGPNH 343 (447)
T ss_dssp EECTTCCCHHHHHHHHHHCTTSEEEEEECCCBC---CCSTTHHHHHHHHHHHHHHHHHHTTCCEEEEEESEEETTSCCCT
T ss_pred EEccCCCcHHHHHHHHHHCCCCeEEEeccccCC---cccCCCCCCcHHHHHHHHHHHHhcCCEEEEEhhhhhCcCCCCcc
Confidence 222 111 1 13478999999986431 2111000 011333444333345555433333222 77664
Q ss_pred -CCCCCCCcccccccCCCCCC---cCCCC-CChhHHHHHHHHHHHHHhhhcccCCCCCCCCCCCCceEEEEEcCCCceEE
Q 009890 300 -DRTSGGPFISTSYDYDAPLD---EYGLI-RQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVYKTGSGLCSA 374 (523)
Q Consensus 300 -G~~~G~~~~~TSYDy~Api~---E~G~~-~~pKy~~lk~lh~~i~~~~~~L~~~~~~~~~lg~~~~~~v~~~~~~~~~~ 374 (523)
|.+. +++|. +.|.+ .+|.|..+....+||+.-...+... .-.++..+..|.+.+|.-++
T Consensus 344 ~g~~~-----------~g~i~vd~~~g~~~~~~~yy~~~hfSkfirPGa~rI~~~-----~~~~~l~~~Af~~pdg~~vv 407 (447)
T 2wnw_A 344 QGNLC-----------EAPIQYDAQNDVLRRNHSWYGIGHFCRYVRPGARVMLSS-----SYDNLLEEVGFVNPDGERVL 407 (447)
T ss_dssp TCCCB-----------CCSEEEETTTTEEEECHHHHHHHHHHTTCCTTCEEEEEE-----ESCTTEEEEEEECTTSCEEE
T ss_pred CCCCc-----------CccEEEeCCCCeEEEChHHHHHHHHHhhcCCCCEEEEee-----cCCCCeEEEEEECCCCCEEE
Confidence 3221 22331 23322 4789999999999988533333211 11124566678776666666
Q ss_pred EEEeCCC-CeeEEEEECCe--EEEecCeeEE
Q 009890 375 FLANIGT-NSDVTVKFNGN--SYLLPAWSVS 402 (523)
Q Consensus 375 Fl~N~~~-~~~~~V~f~~~--~~~lp~~svs 402 (523)
-+.|..+ ...++|.+.++ +++||+.||.
T Consensus 408 Vv~N~~~~~~~~~~~~~g~~~~~~lpa~Sv~ 438 (447)
T 2wnw_A 408 VVYNRDVQERRCRVLDGDKEIALTLPPSGAS 438 (447)
T ss_dssp EEEECSSSCEEEEEEETTEEEEEEECTTCEE
T ss_pred EEEeCCCCCEEEEEEECCcEEEEEECCCeEE
Confidence 6677543 45567777765 7889999984
|
| >2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=2.9e-07 Score=100.84 Aligned_cols=110 Identities=15% Similarity=0.131 Sum_probs=90.5
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCC-ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVR-NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~-G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++|+.||++|+|++|+-+-|...+|.+ |++|-.|-...+++|+.+.++||.+++-+ ..-.+|.||.+
T Consensus 128 ~~y~eDi~lm~~lG~~~~RfsIsWsRI~P~g~g~~n~~Gl~~Y~~lid~l~~~GI~p~vtL--------~H~d~P~~L~~ 199 (565)
T 2dga_A 128 HLYEEDVKALKDMGMKVYRFSISWSRILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTI--------WHWDTPQALED 199 (565)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCHHHHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHHH
T ss_pred HHHHHHHHHHHHhCCCeEEecccHHHhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe--------CCCCCcHHHHH
Confidence 4689999999999999999999999999998 99997777799999999999999999876 25678999987
Q ss_pred C-CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 135 I-PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 135 ~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
. ++- .++...+...+|.+.+++++++ -|..|+.-||++.
T Consensus 200 ~yggw----~~r~~~~~F~~ya~~~~~~~gd---------~V~~W~t~NEp~~ 239 (565)
T 2dga_A 200 KYGGF----LNRQIVDDYKQFAEVCFKNFGD---------RVKNWFTFNEPHT 239 (565)
T ss_dssp HHCGG----GSTHHHHHHHHHHHHHHHHHTT---------TCCEEEEEECHHH
T ss_pred hcCCC----CCchHHHHHHHHHHHHHHHhCC---------CCceEEEeccchh
Confidence 4 553 2344555556666667776662 3889999999864
|
| >3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei} | Back alignment and structure |
|---|
Probab=98.29 E-value=2.7e-07 Score=99.35 Aligned_cols=111 Identities=18% Similarity=0.169 Sum_probs=90.1
Q ss_pred ccchHHHHHHHHhCCCCEEEEccccCcCCCCC---ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcc
Q 009890 55 PEMWPDLIQKSKDGGLDVIETYVFWNLHEPVR---NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLW 131 (523)
Q Consensus 55 ~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~---G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~W 131 (523)
-..|+++++.||++|+|++|+-+.|...+|.+ |++|-.|-...+++|+.+.++||.+++-. ..-.+|.|
T Consensus 61 Y~~y~eDi~lm~~lG~~~~R~sisWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL--------~H~d~P~~ 132 (473)
T 3ahy_A 61 YNRTAEDIALLKSLGAKSYRFSISWSRIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITL--------FHWDLPEG 132 (473)
T ss_dssp GGCHHHHHHHHHHHTCSEEEEECCHHHHSSSCSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHH
T ss_pred HHHHHHHHHHHHHhCCCeEEccccHHhhcCCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe--------CCCcCCHH
Confidence 35699999999999999999999999999998 89997777799999999999999999876 35679999
Q ss_pred ccCC-CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 132 LHFI-PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 132 L~~~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
|.+. +|- .+.+...+.-.+|.+.+++.+ ++ |..|++-||++.
T Consensus 133 L~~~yggw---~~~~~~~~~f~~ya~~~~~~~-dr---------V~~W~t~NEp~~ 175 (473)
T 3ahy_A 133 LHQRYGGL---LNRTEFPLDFENYARVMFRAL-PK---------VRNWITFNEPLC 175 (473)
T ss_dssp HHHHHCGG---GCTTHHHHHHHHHHHHHHHHC-TT---------CCEEEEEECHHH
T ss_pred HHhhcCCC---cCchhhHHHHHHHHHHHHHHh-Cc---------CCEEEecCchhh
Confidence 9864 553 222455555566666666666 43 789999999875
|
| >2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=4e-07 Score=97.77 Aligned_cols=112 Identities=13% Similarity=0.116 Sum_probs=90.8
Q ss_pred ccchHHHHHHHHhCCCCEEEEccccCcCCCCC---ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcc
Q 009890 55 PEMWPDLIQKSKDGGLDVIETYVFWNLHEPVR---NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLW 131 (523)
Q Consensus 55 ~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~---G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~W 131 (523)
-..|+++++.||++|+|++|+-+.|...+|.+ |++|-.|-...+++|+.+.++||.+++-. ....+|.|
T Consensus 61 Y~~y~eDi~lm~~~G~~~~R~sisWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL--------~H~d~P~~ 132 (465)
T 2e3z_A 61 YNRWREDVQLLKSYGVKAYRFSLSWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTL--------YHWDLPQA 132 (465)
T ss_dssp TTTHHHHHHHHHHTTCSEEEEECCHHHHSTTCSTTSCCCHHHHHHHHHHHHHHHHHTCEEEEEE--------ESSCCBHH
T ss_pred HHHhHHHHHHHHHhCCCceecccchHHhcCCCCcCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe--------CCCcCCHH
Confidence 35589999999999999999999999999998 99997777799999999999999998876 35678999
Q ss_pred ccCC-CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 132 LHFI-PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 132 L~~~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
|.+. .|- .+.+...+...+|.+.+++++++ -|..|++-||++.
T Consensus 133 L~~~yggw---~~~~~~~~~f~~ya~~~~~~~gd---------~V~~W~t~NEp~~ 176 (465)
T 2e3z_A 133 LDDRYGGW---LNKEEAIQDFTNYAKLCFESFGD---------LVQNWITFNEPWV 176 (465)
T ss_dssp HHHHHCGG---GSHHHHHHHHHHHHHHHHHHHTT---------TCCEEEEEECHHH
T ss_pred HHhhcCCC---CCCcchHHHHHHHHHHHHHHhCC---------CceEEEEccCchH
Confidence 9863 432 12155556666666777777762 3889999999875
|
| >1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=98.27 E-value=3.8e-07 Score=98.51 Aligned_cols=110 Identities=15% Similarity=0.093 Sum_probs=89.8
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCC---ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVR---NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWL 132 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~---G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL 132 (523)
..|+++++.||++|+|++|+-+.|...+|.+ |++|-.|-...+++|+.+.++||.+++-. ..-.+|.||
T Consensus 73 ~~~~eDi~lm~~~G~~~~R~sisWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL--------~H~d~P~~L 144 (490)
T 1cbg_A 73 HRYKEDIGIMKDMNLDAYRFSISWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTL--------FHWDVPQAL 144 (490)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCHHHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHH
T ss_pred HHHHHHHHHHHHhCCCeEEecccHHHhCCCCCcCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe--------CCCCCCHhH
Confidence 4699999999999999999999999999998 99997777799999999999999998876 256789999
Q ss_pred cCC-CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 133 HFI-PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 133 ~~~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
.+. .+- .|+...+...+|.+.+++++++ -|..|+.-||++.
T Consensus 145 ~~~yggw----~~~~~~~~f~~ya~~~~~~~gd---------~V~~W~t~NEp~~ 186 (490)
T 1cbg_A 145 EDEYRGF----LGRNIVDDFRDYAELCFKEFGD---------RVKHWITLNEPWG 186 (490)
T ss_dssp HHHHCGG----GSTTHHHHHHHHHHHHHHHHTT---------TCCEEEEEECHHH
T ss_pred HhhcCCc----CCchHHHHHHHHHHHHHHHhCC---------cceEEEEccCchh
Confidence 863 442 1233556666666777777763 3889999999864
|
| >2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.27 E-value=5.3e-07 Score=97.16 Aligned_cols=111 Identities=17% Similarity=0.138 Sum_probs=94.9
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC--CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV--RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH 133 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~--~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~ 133 (523)
..|+++|+.||++|+|++|+-+.|...+|. +|++|-.|-..++++|+.|.++||.+++-+- .-++|.||.
T Consensus 71 ~~~~eDi~lm~~~G~~~~R~sisW~Ri~P~G~~g~~n~~gl~~yd~lid~l~~~GI~pivtL~--------H~d~P~~l~ 142 (479)
T 2xhy_A 71 GHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLS--------HFEMPLHLV 142 (479)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCHHHHSSSSCCSSCCHHHHHHHHHHHHHHHHTTCEEEEEEE--------SSCCBHHHH
T ss_pred hhhHHHHHHHHHcCCCEEEeeCCHHHhCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcC--------CCCCCHHHH
Confidence 458999999999999999999999999998 7988887777999999999999999998772 457899998
Q ss_pred C-CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccc
Q 009890 134 F-IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNI 187 (523)
Q Consensus 134 ~-~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~ 187 (523)
+ .++. .|+.+.++..+|.+.+++++++ -|..|++=||....
T Consensus 143 ~~~ggw----~~~~~~~~F~~ya~~~~~~~gd---------~V~~w~t~NEp~~~ 184 (479)
T 2xhy_A 143 QQYGSW----TNRKVVDFFVRFAEVVFERYKH---------KVKYWMTFNEINNQ 184 (479)
T ss_dssp HHSCGG----GSTHHHHHHHHHHHHHHHHTTT---------TCCEEEEETTTTGG
T ss_pred hhcCCC----CCHHHHHHHHHHHHHHHHHhCC---------CCCcEEEecCcchh
Confidence 6 5553 4577888888888888888883 37799999999764
|
| >1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=4.4e-07 Score=99.50 Aligned_cols=109 Identities=17% Similarity=0.144 Sum_probs=90.2
Q ss_pred chHHHHHHHHhCCCCEEEEccccCcCCCCC---ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcccc
Q 009890 57 MWPDLIQKSKDGGLDVIETYVFWNLHEPVR---NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH 133 (523)
Q Consensus 57 ~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~---G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~ 133 (523)
.|+++++.||++|+|++|+-+-|...+|.+ |++|-.|-...+++|+.+.++||.+++-. ..-.+|.||.
T Consensus 131 ~y~eDi~lm~~lG~~~~R~sisWsRi~P~g~~~g~~n~~G~~~Y~~lid~l~~~GI~p~vtL--------~H~d~P~~L~ 202 (565)
T 1v02_A 131 MYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITI--------FHWDTPQALV 202 (565)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCHHHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHH
T ss_pred HHHHHHHHHHHhCCCeEEcccCHHHhCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe--------CCCCCCHHHH
Confidence 499999999999999999999999999998 99997777799999999999999998876 2567999997
Q ss_pred CC-CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 134 FI-PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 134 ~~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
+. ++- -++...+...+|.+.+++++++ -|..|+.-||+..
T Consensus 203 ~~yggw----~~r~~~~~f~~ya~~~~~~~gd---------~V~~W~t~NEp~~ 243 (565)
T 1v02_A 203 DAYGGF----LDERIIKDYTDFAKVCFEKFGK---------TVKNWLTFNEPET 243 (565)
T ss_dssp HHHCGG----GSTHHHHHHHHHHHHHHHHHTT---------TCCEEEEEECHHH
T ss_pred hhcCCC----CCchHHHHHHHHHHHHHHHhCC---------cceEEEEccCchh
Confidence 64 553 2344556666677777777763 3889999999864
|
| >2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A | Back alignment and structure |
|---|
Probab=98.23 E-value=4.8e-07 Score=98.56 Aligned_cols=109 Identities=16% Similarity=0.121 Sum_probs=90.4
Q ss_pred chHHHHHHHHhCCCCEEEEccccCcCCCCC---ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcccc
Q 009890 57 MWPDLIQKSKDGGLDVIETYVFWNLHEPVR---NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH 133 (523)
Q Consensus 57 ~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~---G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~ 133 (523)
.|+++|+.||++|+|++|+-+-|...+|.+ |++|-.|-...+++|+.+.++||.+++-. ....+|.||.
T Consensus 98 ~y~eDi~lm~~lG~~~~R~sisWsRi~P~g~~~g~~n~~G~~~Y~~lid~l~~~GI~p~vtL--------~H~d~P~~L~ 169 (532)
T 2jf7_A 98 MYKEDIKIMKQTGLESYRFSISWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTL--------FHWDLPQALE 169 (532)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCHHHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHH
T ss_pred HHHHHHHHHHHcCCCeEeccccHHHhccCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe--------CCCCCCHHHH
Confidence 499999999999999999999999999998 99997777799999999999999998876 3567999998
Q ss_pred CC-CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 134 FI-PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 134 ~~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
+. ++- -++...+...+|.+.+++++++ -|..|+.-||++.
T Consensus 170 ~~yggw----~~r~~~~~f~~ya~~~~~~~gd---------~V~~W~t~NEp~~ 210 (532)
T 2jf7_A 170 DEYGGF----LSHRIVDDFCEYAEFCFWEFGD---------KIKYWTTFNEPHT 210 (532)
T ss_dssp HHHCGG----GSTHHHHHHHHHHHHHHHHHGG---------GCSEEEEEECHHH
T ss_pred hhcCCC----CCchHHHHHHHHHHHHHHHhCC---------cCceEEEccCchh
Confidence 73 653 2344556666677777777763 3889999999874
|
| >3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} | Back alignment and structure |
|---|
Probab=98.22 E-value=9e-06 Score=84.02 Aligned_cols=156 Identities=7% Similarity=0.019 Sum_probs=99.9
Q ss_pred EEEEEEeeCCCC----CccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccC-----cchHHHHHHHHHHcCCEEE
Q 009890 42 VLISGSIHYPRS----TPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEG-----RYDLVKFVKLVAEAGLYAH 112 (523)
Q Consensus 42 ~l~sG~iHy~R~----~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G-----~~dL~~fl~la~~~GL~Vi 112 (523)
++.+-++|+... ..+.=++.|+.||+.|+|.|++.+.|+.-.+.-+.+.|.+ ...+..+++.|++.||.|+
T Consensus 35 ~i~Gis~~~~~~~~~~~~~~~~~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~ 114 (343)
T 3civ_A 35 FIRGMTFGFVGQHGTWGTDEARASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVC 114 (343)
T ss_dssp CEEEEEESTTCBTTGGGSHHHHHHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEE
T ss_pred ceeeEEeccccCCCCcCchhHHHHHHHHHHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEE
Confidence 455666664321 2222358999999999999999999988877776655542 4568999999999999999
Q ss_pred EecCceeccccCCCCCCccc---c-CCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccc
Q 009890 113 LRIGPYVCAEWNFGGFPLWL---H-FIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNID 188 (523)
Q Consensus 113 lr~GPyi~aEw~~GG~P~WL---~-~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~ 188 (523)
|.|.+.+ + . +.|- . ..|+. ..++...+....+.+.|. +++ .+ .+++.|++|||.||.....
T Consensus 115 l~p~i~~--~--~---g~w~g~i~~~~~~~---~~~~~w~~~f~~y~~~i~-~~a--~~--a~~~~V~~~~IGNE~~~~~ 179 (343)
T 3civ_A 115 LKPTVNC--R--D---GTWRGEIRFEKEHG---PDLESWEAWFGSYSDMMA-HYA--HV--AKRTGCEMFCVGCEMTTAE 179 (343)
T ss_dssp EEEEEEE--T--T---CCCGGGCCCSBSCC---TTSSBHHHHHHHHHHHHH-HHH--HH--HHHTTCSEEEEEESCTTTT
T ss_pred EEEEeec--c--C---CcccccccccCcCC---cchHHHHHHHHHHHHHHH-HHH--HH--ccCCCceEEEECCCCCCCC
Confidence 9875543 1 1 1331 1 11211 223333333334444332 222 11 1234689999999997642
Q ss_pred cccCcccHHHHHHHHHHHHhcCCCcceEEc
Q 009890 189 SAYGAAGKSYIKWAAGMALSLDTGVPWVMC 218 (523)
Q Consensus 189 ~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~ 218 (523)
...+|+..|.+.+|+..-+ |++..
T Consensus 180 -----~~~~~~~~Li~~vR~~~~g-~VTya 203 (343)
T 3civ_A 180 -----PHEAMWRETIARVRTEYDG-LVTYN 203 (343)
T ss_dssp -----TCHHHHHHHHHHHHHHCCS-EEEEE
T ss_pred -----chHHHHHHHHHHHHhhCCC-CEEEE
Confidence 3567899999999998765 76554
|
| >1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=7.8e-07 Score=95.63 Aligned_cols=109 Identities=15% Similarity=0.107 Sum_probs=88.5
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++++.||++|+|++|+-+.|...+|. +|++|-.|-...+++|+.+.++||.+++-. ..-++|.||.+
T Consensus 54 h~y~eDi~lm~~~G~~~~R~sisWsRi~P~G~g~~N~~gl~~y~~lid~l~~~GI~p~vtL--------~H~d~P~~L~~ 125 (468)
T 1pbg_A 54 HKYPVDLELAEEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTL--------HHFDTPEALHS 125 (468)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCHHHHSTTSSSSCCHHHHHHHHHHHHHHHHHTCEEEEEE--------ESSCCBHHHHH
T ss_pred ccCHHHHHHHHHhCCCEEEeccCHhhhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe--------CCCccCHHHHh
Confidence 458999999999999999999999999999 699998888899999999999999998876 25678999987
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
..+- .++...+...+|.+.++++++ . |..|+.-||...
T Consensus 126 ~ggw----~~r~~~~~F~~ya~~~~~~~g---------d-V~~W~t~NEp~~ 163 (468)
T 1pbg_A 126 NGDF----LNRENIEHFIDYAAFCFEEFP---------E-VNYWTTFNEIGP 163 (468)
T ss_dssp TTGG----GSTHHHHHHHHHHHHHHHHCT---------T-CCEEEEESCHHH
T ss_pred cCCC----CChHHHHHHHHHHHHHHHHhC---------C-CCEEEEecCchh
Confidence 5442 234455555556555555554 3 899999999875
|
| >3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} | Back alignment and structure |
|---|
Probab=98.15 E-value=2.4e-06 Score=87.89 Aligned_cols=152 Identities=19% Similarity=0.283 Sum_probs=110.5
Q ss_pred EEEEEeeCCCCCccchHHHHHHHHhCCCCEEEE--ccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceec
Q 009890 43 LISGSIHYPRSTPEMWPDLIQKSKDGGLDVIET--YVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVC 120 (523)
Q Consensus 43 l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~t--YvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~ 120 (523)
+++.++. ........+.++..+ -+|.|.. -+-|...||+||+|||+ ..+++++.|+++||.|.-.+ .+
T Consensus 16 ~~G~a~~--~~~~~~~~~~~~~~~--~Fn~~t~eN~mKW~~iep~~G~~~f~---~~D~~v~~a~~~gi~vrGHt--Lv- 85 (327)
T 3u7b_A 16 YFGTALT--VRNDQGEIDIINNKN--EIGSITPENAMKWEAIQPNRGQFNWG---PADQHAAAATSRGYELRCHT--LV- 85 (327)
T ss_dssp EEEEEEC--CCSCCHHHHHHTCTT--TCCEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHTTTCEEEEEE--EE-
T ss_pred EEEEecc--CccCHHHHHHHHhHh--hCCeEEECccccHHHhcCCCCccChH---HHHHHHHHHHHCCCEEEEee--ee-
Confidence 3677777 233334555554433 4666654 67799999999999999 79999999999999975322 11
Q ss_pred cccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccc------cCcc
Q 009890 121 AEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSA------YGAA 194 (523)
Q Consensus 121 aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~------~g~~ 194 (523)
|- ...|.|+...+ .+.+..++.++++++.++.+++ |-|..|.|-||.-+.... +..-
T Consensus 86 --Wh-~q~P~W~~~~~-----~~~~~l~~~~~~~I~~v~~rY~---------g~i~~WDVvNE~~~~~g~~r~~~~~~~~ 148 (327)
T 3u7b_A 86 --WH-SQLPSWVANGN-----WNNQTLQAVMRDHINAVMGRYR---------GKCTHWDVVNEALNEDGTYRDSVFLRVI 148 (327)
T ss_dssp --ES-TTCCHHHHTCC-----CCHHHHHHHHHHHHHHHHHHTT---------TTCSEEEEEECCBCTTSSBCCCHHHHHH
T ss_pred --cC-CcCcHHHhcCC-----CCHHHHHHHHHHHHHHHHHHhC---------CCceEEEEeccccCCCCCccccchhhhc
Confidence 32 35899997532 1346678899999999988887 468999999997542111 1123
Q ss_pred cHHHHHHHHHHHHhcCCCcceEEccCC
Q 009890 195 GKSYIKWAAGMALSLDTGVPWVMCQQS 221 (523)
Q Consensus 195 ~~~y~~~l~~~~~~~g~~vP~~~~~~~ 221 (523)
|.+|+..+-+.|++.+.++.+++++-+
T Consensus 149 G~~~i~~af~~Ar~~dP~a~L~~Ndyn 175 (327)
T 3u7b_A 149 GEAYIPIAFRMALAADPTTKLYYNDYN 175 (327)
T ss_dssp CTTHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred cHHHHHHHHHHHHhHCCCCeEEecccc
Confidence 568999999999999999999998753
|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=1.3e-05 Score=84.59 Aligned_cols=136 Identities=17% Similarity=0.287 Sum_probs=87.3
Q ss_pred HHHHHHHHhCCCCEEEEccccCcCCCC--------CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCC---
Q 009890 59 PDLIQKSKDGGLDVIETYVFWNLHEPV--------RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGG--- 127 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~tYvfWn~HEp~--------~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG--- 127 (523)
++.++.||+.|+|+||+.+ | .+|. +|.+|.+ .+.+.++.|+++||.|+|.+ -| ...|.-.|
T Consensus 51 ~d~~~ilk~~G~N~VRlrv-w--v~p~~~~g~~y~~g~~d~~---~~~~~a~~Ak~~GLkVlldf-Hy-sD~WadPg~Q~ 122 (399)
T 1ur4_A 51 QDIFKTLKEAGVNYVRVRI-W--NDPYDANGNGYGGGNNDLE---KAIQIGKRATANGMKLLADF-HY-SDFWADPAKQK 122 (399)
T ss_dssp CCHHHHHHHTTCCEEEEEE-C--SCCBCTTCCBCSTTCCCHH---HHHHHHHHHHHTTCEEEEEE-CS-SSSCCSSSCCC
T ss_pred chHHHHHHHCCCCEEEEee-e--cCCcccccCccCCCCCCHH---HHHHHHHHHHHCCCEEEEEe-cc-CCccCCccccc
Confidence 5789999999999999988 7 5555 2444444 56667779999999999975 11 11222111
Q ss_pred CC-ccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCc---ccHHHHHHHH
Q 009890 128 FP-LWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGA---AGKSYIKWAA 203 (523)
Q Consensus 128 ~P-~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~---~~~~y~~~l~ 203 (523)
.| .|.. .+.+.+.+++.+|.+.+++.++++ |..+-++||.||...-.. -+. .-.++++...
T Consensus 123 ~P~aW~~--------~~~~~l~~~~~~yt~~~l~~l~~~------g~~~~~vqvGNEi~~g~~-~~~~~~~la~ll~ag~ 187 (399)
T 1ur4_A 123 APKAWAN--------LNFEDKKTALYQYTKQSLKAMKAA------GIDIGMVQVGNETNGGLA-GETDWAKMSQLFNAGS 187 (399)
T ss_dssp CCGGGTT--------CCHHHHHHHHHHHHHHHHHHHHHT------TCCEEEEEESSSCSSCBT-TBCCHHHHHHHHHHHH
T ss_pred Ccccccc--------CCHHHHHHHHHHHHHHHHHHHHhc------CCCCcEEEEccccccccC-CcccHHHHHHHHHHHH
Confidence 01 2321 134567788889999999999854 556789999999754110 011 1234455556
Q ss_pred HHHHhcCCCcceEE
Q 009890 204 GMALSLDTGVPWVM 217 (523)
Q Consensus 204 ~~~~~~g~~vP~~~ 217 (523)
+..|+..-+.++++
T Consensus 188 ~aVR~v~p~~~V~i 201 (399)
T 1ur4_A 188 QAVRETDSNILVAL 201 (399)
T ss_dssp HHHHHHCTTSEEEE
T ss_pred HHHHHhCCCCeEEE
Confidence 66677766665443
|
| >4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} | Back alignment and structure |
|---|
Probab=98.13 E-value=7.7e-06 Score=84.36 Aligned_cols=152 Identities=16% Similarity=0.192 Sum_probs=113.1
Q ss_pred EEEEEeeCCC---CCccchHHHHHHHHhCCCCEEEE--ccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCc
Q 009890 43 LISGSIHYPR---STPEMWPDLIQKSKDGGLDVIET--YVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGP 117 (523)
Q Consensus 43 l~sG~iHy~R---~~~~~W~d~l~k~Ka~GlN~V~t--YvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GP 117 (523)
.++.+++... .......+.+.+ -+|.|.. -.-|...||+||+|||+ ..+++++.|+++||.|.-.+
T Consensus 15 ~fG~A~~~~~~~~~~~~~y~~~~~~----~Fn~~t~eN~mKW~~~ep~~G~~~f~---~aD~~v~~a~~~gi~vrGHt-- 85 (335)
T 4f8x_A 15 WFGTAADIPGTAETTDAAYLKVLKQ----NFGEITPANAMKFMYTETEQNVFNFT---EGEQFLEVAERFGSKVRCHN-- 85 (335)
T ss_dssp EEEEEECTTTSGGGGCHHHHHHHHH----HCSEEEESSTTSGGGTEEETTEECCH---HHHHHHHHHHHTTCEEEEEE--
T ss_pred eEEEEecCccccccCCHHHHHHHHH----hCCEEEECCccchHHhCCCCCccCcc---hhHHHHHHHHHCCCEEEEee--
Confidence 5778887652 334445555544 5888887 68899999999999999 89999999999999874322
Q ss_pred eeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccccccc------
Q 009890 118 YVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAY------ 191 (523)
Q Consensus 118 yi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~------ 191 (523)
.+ |- ...|.|+...+ .+.+..++.++++++.++.+++ |-|..|-|=||.-+-...+
T Consensus 86 Lv---Wh-~q~P~W~~~~~-----~~~~~l~~~~~~~I~~v~~rY~---------g~i~~WDVvNE~~~~~g~~r~s~~~ 147 (335)
T 4f8x_A 86 LV---WA-SQVSDFVTSKT-----WTAKELTAVMKNHIFKTVQHFG---------RRCYSWDVVNEALNGDGTFSSSVWY 147 (335)
T ss_dssp EE---CS-SSCCHHHHTSC-----CCHHHHHHHHHHHHHHHHHHHG---------GGCSEEEEEESCBCTTSSBCCCHHH
T ss_pred ec---cc-ccCcHHHhcCC-----CCHHHHHHHHHHHHHHHHHHhC---------CCceEEEEecCccCCCCccccCchh
Confidence 11 32 35899998421 1346788999999999999988 3689999999975421111
Q ss_pred CcccHHHHHHHHHHHHhc-----CCCcceEEccCC
Q 009890 192 GAAGKSYIKWAAGMALSL-----DTGVPWVMCQQS 221 (523)
Q Consensus 192 g~~~~~y~~~l~~~~~~~-----g~~vP~~~~~~~ 221 (523)
..-|.+|+...-++|++. +.++.+++++-+
T Consensus 148 ~~lG~~~i~~aF~~Ar~a~~~~~dP~a~L~~NDYn 182 (335)
T 4f8x_A 148 DTIGEEYFYLAFKYAQEALAQIGANDVKLYYNDYG 182 (335)
T ss_dssp HHHCTHHHHHHHHHHHHHHHHTTCTTSEEEEEESS
T ss_pred hhcCHHHHHHHHHHHHHhccccCCCCcEEEEeccc
Confidence 123678999999999998 899999998853
|
| >1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 | Back alignment and structure |
|---|
Probab=98.12 E-value=2.8e-06 Score=90.39 Aligned_cols=113 Identities=27% Similarity=0.511 Sum_probs=80.9
Q ss_pred CccchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEE--EEecCceeccccCCC----
Q 009890 54 TPEMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYA--HLRIGPYVCAEWNFG---- 126 (523)
Q Consensus 54 ~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~V--ilr~GPyi~aEw~~G---- 126 (523)
.++.-+..|+++|++|++.|.+.|.|...|+. |++|||+| -.+++++++++||++ |+.+ .-|+- |-|
T Consensus 32 ~~~~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsg---Y~~L~~mv~~~GLKlq~vmSF--HqCGg-NVGD~~~ 105 (498)
T 1fa2_A 32 DKEKVEDELKQVKAGGCDGVMVDVWWGIIEAKGPKQYDWSA---YRELFQLVKKCGLKIQAIMSF--HQCGG-NVGDAVF 105 (498)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEEHHHHTCSBTTBCCCHH---HHHHHHHHHHTTCEEEEEEEC--SCBCC-CTTCCCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHH---HHHHHHHHHHcCCeEEEEEEe--eecCC-CCCCccc
Confidence 34455788999999999999999999999997 99999996 677799999999997 5554 23321 111
Q ss_pred -CCCccccC----CCCeeee------------------------cCChhHHHHHHHHHHHHHHHHHhcccccccCCceEe
Q 009890 127 -GFPLWLHF----IPGIQFR------------------------TDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIIL 177 (523)
Q Consensus 127 -G~P~WL~~----~p~i~~R------------------------t~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~ 177 (523)
-+|.|+.+ +|+|.+. |-=+.|.+.|+.|-+.+.+.+. +|-|.-
T Consensus 106 IPLP~WV~~~~~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTpiq~Y~Dfm~SFr~~F~~~~~--------~~~I~e 177 (498)
T 1fa2_A 106 IPIPQWILQIGDKNPDIFYTNRAGNRNQEYLSLGVDNQRLFQGRTALEMYRDFMESFRDNMADFLK--------AGDIVD 177 (498)
T ss_dssp BCSCHHHHHHTTTCGGGEEECTTCCEEEEEECGGGTTCEEETTEEHHHHHHHHHHHHHHHSHHHHH--------HTCEEE
T ss_pred ccCCHHHHHhhccCCCceEECCCCCccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHhcc--------CCeeEE
Confidence 28999975 4666331 1113466777777666666653 356777
Q ss_pred ccc
Q 009890 178 SQI 180 (523)
Q Consensus 178 ~QI 180 (523)
+||
T Consensus 178 I~V 180 (498)
T 1fa2_A 178 IEV 180 (498)
T ss_dssp EEE
T ss_pred EEe
Confidence 776
|
| >3kzs_A Glycosyl hydrolase family 5; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.10A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.12 E-value=2.9e-05 Score=83.25 Aligned_cols=156 Identities=16% Similarity=0.183 Sum_probs=112.7
Q ss_pred CCeeEEEecceEEE-CCEEEEEEEEEeeC--CCCCccchHHHHHHHHhCCCCEEEEccc-----cCc--CCCCCceeecc
Q 009890 23 FGANVTYDHRAVVI-GGKRRVLISGSIHY--PRSTPEMWPDLIQKSKDGGLDVIETYVF-----WNL--HEPVRNQYNFE 92 (523)
Q Consensus 23 ~~~~vt~d~~~l~i-dGk~~~l~sG~iHy--~R~~~~~W~d~l~k~Ka~GlN~V~tYvf-----Wn~--HEp~~G~ydF~ 92 (523)
.+-+|+-+++.|.- ||+||+.++=-..- .|.+.+.|+.-|+..|+.|||+|++=++ ||. +.|-++.|||+
T Consensus 16 g~l~Vs~~~r~f~~~dG~PFf~lgDT~W~l~~~l~~~e~~~yL~~R~~qGFNvIq~~vl~~~p~~n~~g~~pf~~~~df~ 95 (463)
T 3kzs_A 16 GKLVVSEEGRYLKHENGTPFFWLGETGWLLPERLNRDEAEYYLEQCKRRGYNVIQVQTLNNVPSMNIYGQYSMTDGYNFK 95 (463)
T ss_dssp CCEEECTTSSCEEETTSCBCCEEEEECTTHHHHCCHHHHHHHHHHHHHTTCCEEEEESCSSSSCBCTTSCBSCSSTTCCT
T ss_pred CCeEEcCCCceEecCCCCeEEechhHHHHHhcCCCHHHHHHHHHHHHHCCCCEEEEEeecCCCCCCcCCCCCcCCCcccc
Confidence 44566668899999 99999999766532 3668899999999999999999999885 553 44455667776
Q ss_pred Cc---------chHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCC-CCeeeecCChhHHHHHHHHHHHHHHHH
Q 009890 93 GR---------YDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFI-PGIQFRTDNEPFKAEMQRFTAKIVDMM 162 (523)
Q Consensus 93 G~---------~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~-p~i~~Rt~d~~fl~~~~~~~~~i~~~i 162 (523)
.- ..+++.|++|.+.||++.|-| .|-..+ .++ + =.+.+++|.+.|++++
T Consensus 96 ~~n~pn~~~YF~h~d~~I~~a~~~Gi~~~Lv~--------------~Wg~~v~~~~-m------~~e~~~~Y~ryl~~Ry 154 (463)
T 3kzs_A 96 NINQKGVYGYWDHMDYIIRTAAKKGLYIGMVC--------------IWGSPVSHGE-M------NVDQAKAYGKFLAERY 154 (463)
T ss_dssp TCCCTTCCCHHHHHHHHHHHHHHTTCEEEEES--------------SCHHHHHTTS-C------CHHHHHHHHHHHHHHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHHHCCCeEEEEE--------------EeCCccccCC-C------CHHHHHHHHHHHHHHh
Confidence 32 358999999999999998744 232221 110 1 0477889999999999
Q ss_pred HhcccccccCCceEeccccccccccccccCcccHHHHHHHHHHHHhcCCCc
Q 009890 163 KQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGV 213 (523)
Q Consensus 163 k~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~v 213 (523)
+..+ +|| |-|-||+... ...++.+.+++..++.+-..
T Consensus 155 ~~~~-------Nii-W~lgGD~~~~------~~~~~w~~~~~~i~~~dp~~ 191 (463)
T 3kzs_A 155 KDEP-------NII-WFIGGDIRGD------VKTAEWEALATSIKAIDKNH 191 (463)
T ss_dssp TTCS-------SEE-EEEESSSCTT------SSHHHHHHHHHHHHHHCCSS
T ss_pred ccCC-------CCE-EEeCCCCCCc------cCHHHHHHHHHHHHhcCCCC
Confidence 9542 565 9999999753 24456677777777766443
|
| >2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=0.0004 Score=72.44 Aligned_cols=297 Identities=11% Similarity=0.101 Sum_probs=159.4
Q ss_pred EEEEEEEEeeC---CCCCccchHHHHHHHHh-CCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEec
Q 009890 40 RRVLISGSIHY---PRSTPEMWPDLIQKSKD-GGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 40 ~~~l~sG~iHy---~R~~~~~W~d~l~k~Ka-~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
.+.=++|.++- .+.+++..+..+..-+- +|++.+|+.+- ++.++|+.. ..+++.|++.|+.++.-|
T Consensus 13 ~i~GfG~~~s~a~~~~l~~~~r~~lF~~~~G~~g~s~~R~~ig-------~~~~~~~~~---~~~~k~A~~~~~~i~asp 82 (383)
T 2y24_A 13 IIQGFGGMSGVGWINDLTTEQINTAYGSGVGQIGLSIMRVRID-------PDSSKWNIQ---LPSARQAVSLGAKIMATP 82 (383)
T ss_dssp ECCEEEEECCBTTBCCCCHHHHHHHHCCSTTCCCCCEEEEEEC-------SSGGGGGGG---HHHHHHHHHTTCEEEEEE
T ss_pred eEEEeehhhhHHHHhhCCHHHHhcccCCCCCcccceEEEEecC-------Ccccccccc---hHHHHHHHhcCCeEEEec
Confidence 33346664431 23455555444432244 79999999884 345777732 678999999999877754
Q ss_pred CceeccccCCCCCCccccCCCCee-eecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCc-
Q 009890 116 GPYVCAEWNFGGFPLWLHFIPGIQ-FRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGA- 193 (523)
Q Consensus 116 GPyi~aEw~~GG~P~WL~~~p~i~-~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~- 193 (523)
| ..|.|+....... -..-.+.+.+...+|+.+.++.++++++ +|=++-+-||..... .|..
T Consensus 83 -------W---SpP~wMk~n~~~~~~g~L~~~~~~~yA~Yl~k~i~~y~~~Gi------~i~~is~qNEP~~~~-~~~~~ 145 (383)
T 2y24_A 83 -------W---SPPAYMKSNNSLINGGRLLPANYSAYTSHLLDFSKYMQTNGA------PLYAISIQNEPDWKP-DYESC 145 (383)
T ss_dssp -------S---CCCGGGBTTSSSBSCCBBCGGGHHHHHHHHHHHHHHHHHTTC------CCSEEESCSCTTCCC-SSBCC
T ss_pred -------C---CCcHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCC------CeEEecccccCCCCC-CCCcc
Confidence 3 4799998643211 0112356778888888888888886654 777888899987531 1211
Q ss_pred --ccHHHHHHHHHHHHhcCCCcceEEccCC--C--CCCcccc------CCC--Cccc--CCCC----CCCCCCCceEeee
Q 009890 194 --AGKSYIKWAAGMALSLDTGVPWVMCQQS--D--APDPIIN------TCN--GFYC--DQFT----PNSNNKPKMWTEN 253 (523)
Q Consensus 194 --~~~~y~~~l~~~~~~~g~~vP~~~~~~~--~--~p~~vi~------~~n--g~~~--~~~~----~~~~~~P~~~tE~ 253 (523)
...+..+.+++....++ .+-++.|+.. + .+++++. ... +++| .... ...++++...||.
T Consensus 146 ~~t~~~~~~fik~~~~~~~-~~kI~~~d~~~~d~~~~~~~l~d~~a~~~v~~i~~H~Y~~~~~~~~~~~~~~k~lw~TE~ 224 (383)
T 2y24_A 146 EWSGDEFKSYLKSQGSKFG-SLKVIVAESLGFNPALTDPVLKDSDASKYVSIIGGHLYGTTPKPYPLAQNAGKQLWMTEH 224 (383)
T ss_dssp BCCHHHHHHHHHHHGGGST-TSEEEEEEETTCCGGGTHHHHTCHHHHTTCCEEEEECTTSCCCCCHHHHHTTCEEEEEEE
T ss_pred CcCHHHHHHHHHHhhhhhc-CCEEEeecccccchhcchhhccCHhHHhhccEEEEecCCCCcccchhhhcCCCeEEEecc
Confidence 13334444444432222 1444544421 1 1112211 111 2222 1111 1235789999998
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHHHHhcCCeeeeeeeeccCCCCCCCCCCCcccccccCCCCCCcCCCCCChhHHHHH
Q 009890 254 WSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLIRQPKWGHLK 333 (523)
Q Consensus 254 ~~Gwf~~wG~~~~~r~~~d~~~~~~~~~~~g~s~~nyYM~hGGTNfG~~~G~~~~~TSYDy~Api~E~G~~~~pKy~~lk 333 (523)
..+-- .+ ...-..+++++..+...+..+.+ -|++.-.- |-..||++.|.+ ++.|..|+
T Consensus 225 ~~~~~--~~-~~~w~~~~~~a~~i~~~l~~~~~---~~~~W~~~---------------~~~Gli~~~G~~-~~~~y~~~ 282 (383)
T 2y24_A 225 YVDSK--QS-ANNWTSAIEVGTELNASMVSNYS---AYVWWYIR---------------RSYGLLTEDGKV-SKRGYVMS 282 (383)
T ss_dssp CSCTT--SC-TTCHHHHHHHHHHHHHHHHTTCS---EEEEEESB---------------STTSSBCTTSCB-CHHHHHHH
T ss_pred ccCCC--cc-cCchhHHHHHHHHHHHHHhcCcc---EEEEeecc---------------CCCCeecCCCeE-eeHHHHHH
Confidence 64210 00 00111245555555554554332 23432211 012378889988 58899999
Q ss_pred HHHHHHHHhhhcccCCCCCCCCCCCCceEEEEEcCCCceEEEEEeCCCC-eeEEEEEC
Q 009890 334 DLHKAIKLCEAALVATDPTYPSLGPNLEATVYKTGSGLCSAFLANIGTN-SDVTVKFN 390 (523)
Q Consensus 334 ~lh~~i~~~~~~L~~~~~~~~~lg~~~~~~v~~~~~~~~~~Fl~N~~~~-~~~~V~f~ 390 (523)
.+.+||+.-...+.... +..++..+..|.+.+|.-++-+.|..+. ..+++++.
T Consensus 283 hfSkfirPG~~ri~~~~----~~~~~l~~~Af~~pdg~~vvV~~N~~~~~~~~~~~l~ 336 (383)
T 2y24_A 283 QYARFVRPGALRIQATE----NPQSNVHLTAYKNTDGKMVIVAVNTNDSDQMLSLNIS 336 (383)
T ss_dssp HHHTTSCTTCEEEEECS----CSBTTEEEEEEECTTCCEEEEEEECSSSCEEEEEEEE
T ss_pred HHhcccCCCCEEEEecC----CCCCceEEEEEECCCCCEEEEEEeCCCCceeEEEEec
Confidence 88888875333332111 1112346666777666666666776543 33444443
|
| >3clw_A Conserved exported protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.10 E-value=0.00033 Score=75.74 Aligned_cols=136 Identities=11% Similarity=0.038 Sum_probs=92.8
Q ss_pred HhCCCCEEEEccc---c-----CcCCC----------CCceeeccCcchHHHHHHHHHHcCCE-EEEecCceeccccCCC
Q 009890 66 KDGGLDVIETYVF---W-----NLHEP----------VRNQYNFEGRYDLVKFVKLVAEAGLY-AHLRIGPYVCAEWNFG 126 (523)
Q Consensus 66 Ka~GlN~V~tYvf---W-----n~HEp----------~~G~ydF~G~~dL~~fl~la~~~GL~-Vilr~GPyi~aEw~~G 126 (523)
+.+|++.+|+.+- + ..+++ ..|+|||+.......||+.|++.|.. ++.-| |
T Consensus 61 ~Glgls~~R~~iG~~d~s~~~ys~~~~~~~~~~~f~~~d~~~d~~~d~~~~~~lk~A~~~~~~~i~asp-------W--- 130 (507)
T 3clw_A 61 IGMALTNWRVNIGAGSYENREAKEVDNSWNRTECFLSPDGKYDFTKQAGQQWFMKAARERGMNNFLFFT-------N--- 130 (507)
T ss_dssp CSCCCSCEEEECCCCTTTTTTSSCCSSSSSCCCCSBCTTSCBCTTSSHHHHHHHHHHHHTTCCCEEEEC-------S---
T ss_pred CCceeEEEEEeccCCCcccccccccCCcccccccccCCCCCcCcccchhHHHHHHHHHHcCCCeEEEeC-------C---
Confidence 4689999998761 1 22222 34789998766678999999998774 33333 3
Q ss_pred CCCccccCCCCeeee------cCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccc--ccc-c-----cccC
Q 009890 127 GFPLWLHFIPGIQFR------TDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEY--GNI-D-----SAYG 192 (523)
Q Consensus 127 G~P~WL~~~p~i~~R------t~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEy--g~~-~-----~~~g 192 (523)
..|.|+...... .. .-.+.|.+....|+.+.++.++++++ +|=++-+-||. ... . +.+.
T Consensus 131 SpP~wMk~ng~~-~~~~g~~~~L~~~~y~~yA~Ylvk~i~~y~~~Gi------~i~~is~qNEP~~~~~~~~~~es~~~t 203 (507)
T 3clw_A 131 SAPYFMTRSAST-VSTDQDCINLQNDKFDDFARFLVKSAQHFREQGF------HVNYISPNNEPNGQWHANSFQEGSFAT 203 (507)
T ss_dssp SCCGGGSSSSSS-SCCCSSSCSSCTTCHHHHHHHHHHHHHHHHHTTC------CEEEEECCSCTTSCGGGCCSSCCCCCC
T ss_pred CCcHHhccCCCc-cCCCCccccCChHHHHHHHHHHHHHHHHHHHcCC------ceeEeeeecCCccccccCCCcCCCCCC
Confidence 479999863221 11 02456777788888888888886544 88888888999 431 0 1111
Q ss_pred -cccHHHHHHHHHHHHhcCCCcceEEc
Q 009890 193 -AAGKSYIKWAAGMALSLDTGVPWVMC 218 (523)
Q Consensus 193 -~~~~~y~~~l~~~~~~~g~~vP~~~~ 218 (523)
+...++++.|+...++.|+++-++.|
T Consensus 204 ~~~~a~fik~L~p~l~~~g~~~kI~~~ 230 (507)
T 3clw_A 204 KADLYRMVEELDKAISEAQIDTKILIP 230 (507)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence 22468889999999999998887777
|
| >1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=3.3e-06 Score=89.90 Aligned_cols=143 Identities=22% Similarity=0.388 Sum_probs=94.5
Q ss_pred CccchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEE--EEecCceeccccCCC----
Q 009890 54 TPEMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYA--HLRIGPYVCAEWNFG---- 126 (523)
Q Consensus 54 ~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~V--ilr~GPyi~aEw~~G---- 126 (523)
.++.-+..|+++|++|++.|.+.|.|...|+. |++|||+| -.+++++++++||++ |+.+ .-|+- |-|
T Consensus 31 ~~~~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsg---Y~~l~~mv~~~GLKlq~vmSF--HqCGg-NVGD~~~ 104 (495)
T 1wdp_A 31 DPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRA---YRSLLQLVQECGLTLQAIMSF--HQCGG-NVGDIVN 104 (495)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHH---HHHHHHHHHHTTCEEEEEEEC--SCBCC-STTCSCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHH---HHHHHHHHHHcCCeEEEEEEe--eecCC-CCCCccc
Confidence 34455778999999999999999999999997 99999996 677799999999997 5554 22321 111
Q ss_pred -CCCccccC----CCCeeee------------------------cCChhHHHHHHHHHHHHHHHHHhcccccccCCceEe
Q 009890 127 -GFPLWLHF----IPGIQFR------------------------TDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIIL 177 (523)
Q Consensus 127 -G~P~WL~~----~p~i~~R------------------------t~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~ 177 (523)
-+|.|+.+ +|+|.+. |-=+.|.+.|+.|-+.+.+.+. ||-|.-
T Consensus 105 IPLP~WV~~~~~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTpiq~Y~Dfm~SFr~~F~~~~~--------~~~I~e 176 (495)
T 1wdp_A 105 IPIPQWVLDIGESNHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFRENMSDFLE--------SGLIID 176 (495)
T ss_dssp BCSCHHHHHHHHHCGGGEEECTTCCEEEEEECGGGTTCCCBTTBCHHHHHHHHHHHHHHHTHHHHH--------TTCEEE
T ss_pred ccCCHHHHHhhccCCCcEEECCCCCccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHhcc--------CCeeEE
Confidence 28999975 5776332 1113466666666666655553 567877
Q ss_pred ccccc----c--ccccc----ccc---C--cccHHHH-HHHHHHHHhcC
Q 009890 178 SQIEN----E--YGNID----SAY---G--AAGKSYI-KWAAGMALSLD 210 (523)
Q Consensus 178 ~QIEN----E--yg~~~----~~~---g--~~~~~y~-~~l~~~~~~~g 210 (523)
+||.= | |-++. +.| | +|-.+|| ..|++.|++.|
T Consensus 177 I~VGlGP~GELRYPSYp~~~gW~fPGiGEFQCYDky~~~~Lk~aA~~~G 225 (495)
T 1wdp_A 177 IEVGLGPAGELRYPSYPQSQGWEFPGIGEFQCYDKYLKADFKAAVARAG 225 (495)
T ss_dssp EEECCSGGGBSSCCCSCGGGTCCTTCCCCCCCCSHHHHHHHHHHHHHTT
T ss_pred EEeCccccccccCCCCccccCCCCCCcceeeechHHHHHHHHHHHHHhC
Confidence 77631 1 11110 011 1 2445665 56888888765
|
| >3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A | Back alignment and structure |
|---|
Probab=98.07 E-value=1.1e-05 Score=83.37 Aligned_cols=153 Identities=19% Similarity=0.326 Sum_probs=111.2
Q ss_pred EEEEEEe--eCCCC-CccchHHHHHHHHhCCCCEEEE--ccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecC
Q 009890 42 VLISGSI--HYPRS-TPEMWPDLIQKSKDGGLDVIET--YVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIG 116 (523)
Q Consensus 42 ~l~sG~i--Hy~R~-~~~~W~d~l~k~Ka~GlN~V~t--YvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~G 116 (523)
+.++.++ +.... ......+.+. .-+|.|.. -+-|...||+||+|||+ ..+++++.|+++||.|.-.+
T Consensus 31 f~~G~Av~~~~~~~~~~~~y~~~~~----~~Fn~~t~eN~mKW~~iep~~G~~~f~---~~D~~v~~a~~~gi~vrgHt- 102 (341)
T 3niy_A 31 IYIGFAAINNFWSLSDEEKYMEVAR----REFNILTPENQMKWDTIHPERDRYNFT---PAEKHVEFAEENNMIVHGHT- 102 (341)
T ss_dssp CEEEEEECTTGGGSTTHHHHHHHHH----HHCSEEEESSTTSHHHHCCBTTEEECH---HHHHHHHHHHHTTCEEEEEE-
T ss_pred CeEEEEeccCchhccCCHHHHHHHH----HhCCEEEECcccchHHhcCCCCccChH---HHHHHHHHHHHCCCeEEeee-
Confidence 4578888 54332 2233444443 35888877 78899999999999999 78999999999999975322
Q ss_pred ceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccccccc-----
Q 009890 117 PYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAY----- 191 (523)
Q Consensus 117 Pyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~----- 191 (523)
.+ |- -..|.|+... + .+.+..++.++++++.++.+++ |-|..|.|=||.-+-...+
T Consensus 103 -Lv---Wh-~q~P~W~~~~-~----~~~~~~~~~~~~~i~~v~~rY~---------g~i~~WDVvNE~~~~~g~~r~s~~ 163 (341)
T 3niy_A 103 -LV---WH-NQLPGWITGR-E----WTKEELLNVLEDHIKTVVSHFK---------GRVKIWDVVNEAVSDSGTYRESVW 163 (341)
T ss_dssp -EE---CS-SSCCHHHHTS-C----CCHHHHHHHHHHHHHHHHHHTT---------TTCCEEEEEECCBCTTSSBCCCHH
T ss_pred -cc---cc-ccCchhhhcC-C----CCHHHHHHHHHHHHHHHHHHcC---------CCccEEEEecccccccccccccch
Confidence 11 32 2589999731 1 1346678889999999988876 4699999999976422111
Q ss_pred -CcccHHHHHHHHHHHHhcCCCcceEEccCC
Q 009890 192 -GAAGKSYIKWAAGMALSLDTGVPWVMCQQS 221 (523)
Q Consensus 192 -g~~~~~y~~~l~~~~~~~g~~vP~~~~~~~ 221 (523)
..-|.+|+..+-+.|++.+.++.+++++-+
T Consensus 164 ~~~lG~~~i~~af~~Ar~~dP~a~L~~NDyn 194 (341)
T 3niy_A 164 YKTIGPEYIEKAFRWTKEADPDAILIYNDYS 194 (341)
T ss_dssp HHHHCTHHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred hhhcCHHHHHHHHHHHHHHCCCceEEeeccc
Confidence 123568999999999999999999998753
|
| >2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=4.8e-06 Score=89.11 Aligned_cols=113 Identities=23% Similarity=0.462 Sum_probs=81.5
Q ss_pred CccchHHHHHHHHhCCCCEEEEccccCcCCC-CCceeeccCcchHHHHHHHHHHcCCEE--EEecCceeccccCCC----
Q 009890 54 TPEMWPDLIQKSKDGGLDVIETYVFWNLHEP-VRNQYNFEGRYDLVKFVKLVAEAGLYA--HLRIGPYVCAEWNFG---- 126 (523)
Q Consensus 54 ~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp-~~G~ydF~G~~dL~~fl~la~~~GL~V--ilr~GPyi~aEw~~G---- 126 (523)
.++.-+..|+++|++|++.|.+.|.|...|+ .|++|||+| -.+++++++++||++ |+.+ .-|+- |-|
T Consensus 29 ~~~~l~a~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsg---Y~~L~~mvr~~GLKlq~vmSF--HqCGg-NVGD~~~ 102 (535)
T 2xfr_A 29 KGDELRAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYDWSA---YKQLFELVQKAGLKLQAIMSF--HQCGG-NVGDAVN 102 (535)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHH---HHHHHHHHHHTTCEEEEEEEC--SCBCC-STTCSCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHH---HHHHHHHHHHcCCeEEEEEEe--eecCC-CCCCccc
Confidence 3445578899999999999999999999998 799999995 677799999999997 5554 23321 111
Q ss_pred -CCCccccC----CCCeeeec--------------CC----------hhHHHHHHHHHHHHHHHHHhcccccccCCceEe
Q 009890 127 -GFPLWLHF----IPGIQFRT--------------DN----------EPFKAEMQRFTAKIVDMMKQEKLYASQGGPIIL 177 (523)
Q Consensus 127 -G~P~WL~~----~p~i~~Rt--------------~d----------~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~ 177 (523)
-+|.|+.+ +|+|.+.. |+ +.|.+.|+.|-+.+.+.+. +|-|.-
T Consensus 103 IPLP~WV~e~~~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTpiq~Y~DFM~SFr~~F~~~~~--------~~~I~e 174 (535)
T 2xfr_A 103 IPIPQWVRDVGTRDPDIFYTDGHGTRNIEYLTLGVDNQPLFHGRSAVQMYADYMTSFRENMKEFLD--------AGVIVD 174 (535)
T ss_dssp BCSCHHHHHHHHHCGGGEEECTTCCEEEEEECGGGTTCCCBTTBCHHHHHHHHHHHHHHHHHHHHH--------TTCEEE
T ss_pred ccCCHHHHHhhhcCCCceEEcCCCCccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHhcc--------CCeeEE
Confidence 28999975 57763321 11 3466777777666666654 467777
Q ss_pred ccc
Q 009890 178 SQI 180 (523)
Q Consensus 178 ~QI 180 (523)
+||
T Consensus 175 I~V 177 (535)
T 2xfr_A 175 IEV 177 (535)
T ss_dssp EEE
T ss_pred EEe
Confidence 776
|
| >1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A | Back alignment and structure |
|---|
Probab=98.01 E-value=1.1e-05 Score=86.49 Aligned_cols=145 Identities=14% Similarity=0.091 Sum_probs=90.8
Q ss_pred CCccchHHHHHHHH-hCCCCEEEEccccCc------CCC--CCc--eeeccCcchHHHHHHHHHHcCCEEEEecCceecc
Q 009890 53 STPEMWPDLIQKSK-DGGLDVIETYVFWNL------HEP--VRN--QYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCA 121 (523)
Q Consensus 53 ~~~~~W~d~l~k~K-a~GlN~V~tYvfWn~------HEp--~~G--~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~a 121 (523)
..++.|++.|+.++ ++|+++||+.+.|.- .+| ++| +|+|. .+++|++.|+++||.+++..+
T Consensus 30 ~~~~~~~e~l~~~~~~~G~~~vR~~~~w~~~~~~~~~~~~~~~g~~~~~~~---~~D~~~~~~~~~Gi~p~v~l~----- 101 (500)
T 1uhv_A 30 ALQKEYIETLKYVKENIDFKYIRGHGLLCDDVGIYREDVVGDEVKPFYNFT---YIDRIFDSFLEIGIRPFVEIG----- 101 (500)
T ss_dssp GGBHHHHHHHHHHHTTSCCCEEECSCTTSTTTCCEEEEEETTEEEEEECCH---HHHHHHHHHHHHTCEECEEEC-----
T ss_pred hhCHHHHHHHHHHHHhcCceEEEEecCcCCCceeeecccccCCCceEEehh---HHHHHHHHHHHCCCEEEEEEc-----
Confidence 34667889999998 999999999999983 222 367 89998 899999999999999887762
Q ss_pred ccCCCCCCccccCCCCeee----ecCChhHHHHHHHHHHHHHHHHHhcccccccCCc-eE--eccccccccccccccCcc
Q 009890 122 EWNFGGFPLWLHFIPGIQF----RTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGP-II--LSQIENEYGNIDSAYGAA 194 (523)
Q Consensus 122 Ew~~GG~P~WL~~~p~i~~----Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGp-II--~~QIENEyg~~~~~~g~~ 194 (523)
..|.|+...++-.+ ....|.-.....+++++++++++++ -|+. |- .|++-||........+..
T Consensus 102 -----~~P~~~~~~~~~~~~~~~~~~~p~~~~~w~~~~~~~~~~~~~r-----yg~~~V~~W~~~~~NEpn~~~~~~~~~ 171 (500)
T 1uhv_A 102 -----FMPKKLASGTQTVFYWEGNVTPPKDYEKWSDLVKAVLHHFISR-----YGIEEVLKWPFEIWNEPNLKEFWKDAD 171 (500)
T ss_dssp -----CCCTTTBSSCCEETTTTEECSCBSCHHHHHHHHHHHHHHHHHH-----HCHHHHTTCCEEESSCTTSTTTSGGGC
T ss_pred -----cChHHHhCCCCceeecCCCCCCCcCHHHHHHHHHHHHHHHHHh-----cCccceeeeeEEEeeCCCCcccCCCCC
Confidence 37999975432111 0223333344445555555555422 1233 54 468999987531001113
Q ss_pred cHHHHHHH---HHHHHhcCCCcce
Q 009890 195 GKSYIKWA---AGMALSLDTGVPW 215 (523)
Q Consensus 195 ~~~y~~~l---~~~~~~~g~~vP~ 215 (523)
...|.+.. ++.+++.+-++.+
T Consensus 172 ~~~y~~~~~~~~~~ik~~~P~~~v 195 (500)
T 1uhv_A 172 EKEYFKLYKVTAKAIKEVNENLKV 195 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSCE
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEE
Confidence 44564443 3444455555443
|
| >1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A | Back alignment and structure |
|---|
Probab=98.00 E-value=4.3e-06 Score=90.10 Aligned_cols=110 Identities=13% Similarity=0.108 Sum_probs=91.1
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCC-ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVR-NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~-G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++|+.||++|+|++|+-+.|...+|.+ |+.|-.|-...+++|+.|.++||.+++-. ..-++|.||.+
T Consensus 71 h~y~eDi~lm~~lG~~~yRfsIsWsRI~P~g~g~~n~~gl~~Y~~lid~l~~~GI~p~vtL--------~H~d~P~~L~~ 142 (479)
T 1gnx_A 71 HRWREDVALMAELGLGAYRFSLAWPRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATL--------YHWDLPQELEN 142 (479)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCHHHHSGGGSSSCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHHH
T ss_pred hcCHHHHHHHHHcCCCEEEecccHHHhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe--------CCCcccHHHHh
Confidence 4589999999999999999999999999996 88887777789999999999999998876 24678999987
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
..+- .++...+...+|.+.+++++++ -|..|..=||...
T Consensus 143 ~GGw----~~r~~v~~F~~ya~~~~~~~gd---------~V~~W~t~NEp~~ 181 (479)
T 1gnx_A 143 AGGW----PERATAERFAEYAAIAADALGD---------RVKTWTTLNEPWC 181 (479)
T ss_dssp TTCT----TSTHHHHHHHHHHHHHHHHHTT---------TCCEEEEEECHHH
T ss_pred cCCC----CCHHHHHHHHHHHHHHHHHhCC---------cceeEEEecCcch
Confidence 5442 3556667777777777777763 3889999999864
|
| >4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} | Back alignment and structure |
|---|
Probab=97.95 E-value=1.4e-05 Score=85.07 Aligned_cols=146 Identities=12% Similarity=0.067 Sum_probs=89.7
Q ss_pred CccchHHHHHHH-HhCCCCEEEEc-cc-----cCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCC
Q 009890 54 TPEMWPDLIQKS-KDGGLDVIETY-VF-----WNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFG 126 (523)
Q Consensus 54 ~~~~W~d~l~k~-Ka~GlN~V~tY-vf-----Wn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~G 126 (523)
..+.|++.|+.+ +++|+..||+. +| |-..|+.+++|||+ .+|++++.|.++||.+++.+|
T Consensus 39 l~~d~~~~l~~~~~~~g~~~vR~h~l~~d~~~~~~~~~g~~~y~~~---~~D~~~d~~~~~G~~p~~~l~---------- 105 (500)
T 4ekj_A 39 IREDSQAQLKTTVDELGFRYIRFHAIFHDVLGTVKVQDGKIVYDWT---KIDQLYDALLAKGIKPFIELG---------- 105 (500)
T ss_dssp TSHHHHHHHHHHHHHHCCCEEECSCTTCTTTTCEEEETTEEEECCH---HHHHHHHHHHHTTCEEEEEEC----------
T ss_pred cChHHHHHHHHHHHhcCceEEEECCccccccceeecCCCCeecchH---HHHHHHHHHHHCCCEEEEEEe----------
Confidence 456788888776 56899999974 22 33334455679998 899999999999999998874
Q ss_pred CCCccccCCCCeeee-------cCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCcccHHHH
Q 009890 127 GFPLWLHFIPGIQFR-------TDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYI 199 (523)
Q Consensus 127 G~P~WL~~~p~i~~R-------t~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~ 199 (523)
..|.|+...+.-.+. .+-..|.+.+++++++++++.... ...+-.|+|.||.............+|.
T Consensus 106 ~~P~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~RYg~~------~v~~w~~EvwNEp~~~~~~~~~~~~~y~ 179 (500)
T 4ekj_A 106 FTPEAMKTSDQTIFYWKGNTSHPKLGPWRDLIDAFVHHLRARYGVE------EVRTWFFEVWNEPNLDGFWEKADQAAYF 179 (500)
T ss_dssp CBCGGGCSSCCEETTTTEECSCCCHHHHHHHHHHHHHHHHHHHCHH------HHHTSEEEESSCTTSTTTSGGGCHHHHH
T ss_pred CCchhhcCCCCccccccCCCCcccHHHHHHHHHHHHHHHHHhhCcc------ccceeEEEEEECCCCccCCCCCCHHHHH
Confidence 568888764432211 011234444555555555544321 1234468999998643211122455777
Q ss_pred HHHHHH---HHhcCCCcceEEc
Q 009890 200 KWAAGM---ALSLDTGVPWVMC 218 (523)
Q Consensus 200 ~~l~~~---~~~~g~~vP~~~~ 218 (523)
+.++.. .++.+.++.+..|
T Consensus 180 ~l~~~~~~aik~~~P~~~Vgg~ 201 (500)
T 4ekj_A 180 ELYDVTARAIKAIDPSLRVGGP 201 (500)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHHHHHHHHHhhCCccccccC
Confidence 665554 4445555555433
|
| >3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=1.3e-05 Score=86.46 Aligned_cols=109 Identities=16% Similarity=0.145 Sum_probs=88.6
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCC-ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVR-NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~-G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++|+.||++|+|++|+-+.|...+|.+ |++|.+|-.-.+++|+.|.++||..++-+ ..-.+|.||.+
T Consensus 70 hrY~eDi~lm~elG~~~yRfsI~WsRI~P~g~g~~N~~Gl~~Y~~lid~l~~~GI~P~vTL--------~H~dlP~~L~~ 141 (488)
T 3gnp_A 70 HRFEEDIQLMADMGMDAYRFSIAWSRIYPNGVGQVNQAGIDHYNKLIDALLAKGIQPYVTL--------YHWDLPQALED 141 (488)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCHHHHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHHH
T ss_pred hhHHHHHHHHHHcCCCEEEecccHHHeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEe--------CCCCCCHHHHH
Confidence 3489999999999999999999999999998 99999999999999999999999988876 34578999976
Q ss_pred C-CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccc
Q 009890 135 I-PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185 (523)
Q Consensus 135 ~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg 185 (523)
. .|- .|+...++..+|.+.+++++++ -|-.|..=||..
T Consensus 142 ~yGGW----~n~~~v~~F~~Ya~~~~~~fgd---------~Vk~W~T~NEp~ 180 (488)
T 3gnp_A 142 KYKGW----LDRQIVDDFAAYAETCFREFGD---------RVKHWITLNEPH 180 (488)
T ss_dssp HHCGG----GSTHHHHHHHHHHHHHHHHHTT---------TCCEEEEEECHH
T ss_pred HhCCC----CCHHHHHHHHHHHHHHHHHhCC---------CCCEEEEccCcc
Confidence 3 442 2455666667777777777763 366777888865
|
| >4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=1.8e-05 Score=84.56 Aligned_cols=110 Identities=15% Similarity=0.170 Sum_probs=88.8
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCC-ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVR-NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~-G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++|+.||++|+|++|+-+.|...+|.+ |++|-.|-...+++|+.+.++||.+++-+ ..=.+|.||.+
T Consensus 58 hry~eDi~l~~~lG~~~~R~si~W~Ri~P~g~g~~N~~gl~~Y~~lid~l~~~GI~p~vtL--------~H~dlP~~L~~ 129 (444)
T 4hz8_A 58 HRYEQDLDLMRQLGLKTYRFSIAWARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATL--------YHWDLPQWVED 129 (444)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCHHHHSCSTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHHH
T ss_pred hhHHHHHHHHHhcCCCEEEEeccHHHcCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe--------CCCCCCHHHhh
Confidence 4489999999999999999999999999996 89998888889999999999999998876 24468999986
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
..|- .|+...++..+|.+.+++++++ -|-.|..=||...
T Consensus 130 ~GGW----~nr~~v~~F~~Ya~~~~~~~gd---------rVk~W~T~NEp~~ 168 (444)
T 4hz8_A 130 EGGW----LSRESASRFAEYTHALVAALGD---------QIPLWVTHNEPMV 168 (444)
T ss_dssp TTGG----GSTHHHHHHHHHHHHHHHHHGG---------GCSEEEEEECHHH
T ss_pred CcCC----CChHHHHHHHHHHHHHHHHhCc---------cCCeEEEccCcch
Confidence 5442 2455666777777777777773 2667788888653
|
| >4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A | Back alignment and structure |
|---|
Probab=97.73 E-value=2.1e-05 Score=84.75 Aligned_cols=109 Identities=11% Similarity=0.072 Sum_probs=88.4
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC--CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV--RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH 133 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~--~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~ 133 (523)
..|+++++.||++|+|++|+-+-|...+|. +|++|-.|-...+++|+.+.++||.+++-. ..-.+|.||.
T Consensus 55 hry~eDi~lm~~lG~~~~Rfsi~W~Ri~P~~G~g~~n~~G~~~Y~~lid~l~~~gI~p~vtL--------~H~dlP~~L~ 126 (479)
T 4b3l_A 55 HQIESDLTLLASLGHNSYRTSIQWTRLIDDFEQATINPDGLAYYNRVIDACLANGIRPVINL--------HHFDLPIALY 126 (479)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECCHHHHBSCTTTTCBCHHHHHHHHHHHHHHHHHTCEEEEES--------CSSCCBHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeecCHHHhccCCCCCCcCHHHHHHHHHHHHHHHHCCCEeeEEe--------cCCCcCHHHH
Confidence 458999999999999999999999999999 889998888899999999999999999877 3567899998
Q ss_pred CC-CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccc
Q 009890 134 FI-PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185 (523)
Q Consensus 134 ~~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg 185 (523)
+. .|- .|+...++..+|.+.+++++++ -|-.|-.=||..
T Consensus 127 ~~yGGW----~nr~~vd~F~~YA~~~f~~fgd---------rVk~WiT~NEp~ 166 (479)
T 4b3l_A 127 QAYGGW----ESKHVVDLFVAFSKVCFEQFGD---------RVKDWFVHNEPM 166 (479)
T ss_dssp HHHCGG----GCHHHHHHHHHHHHHHHHHHTT---------TCCEEEEEECHH
T ss_pred HhcCCc----CCHHHHHHHHHHHHHHHHHhCc---------cCCeEEEccCcc
Confidence 64 442 2456666666777777777663 256677778864
|
| >3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=2.5e-05 Score=84.25 Aligned_cols=110 Identities=13% Similarity=0.096 Sum_probs=87.6
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCC-ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVR-NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~-G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++|+.||++|+|++|+-+-|...+|.+ |++|-+|-.-.+++|+.|.++||..++-+ -.-.+|.||.+
T Consensus 73 hrykeDi~lm~elG~~~yRfsIsWsRI~P~g~g~~n~~Gl~~Y~~lid~l~~~GI~P~vTL--------~H~dlP~~L~~ 144 (481)
T 3f5l_A 73 HRYKEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNL--------YHYDLPLALEK 144 (481)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCHHHHCTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEES--------CSSCCBHHHHH
T ss_pred hhHHHHHHHHHHcCCCEEEecCcHHHhCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe--------CCCCCCHHHHH
Confidence 4589999999999999999999999999997 99998888899999999999999988876 34578999975
Q ss_pred C-CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 135 I-PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 135 ~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
. .|- .|+...++..+|.+.+++++++ -|-.|..=||...
T Consensus 145 ~yGGW----~nr~~v~~F~~Ya~~~~~~fgd---------~Vk~W~T~NEp~~ 184 (481)
T 3f5l_A 145 KYGGW----LNAKMADLFTEYADFCFKTFGN---------RVKHWFTFNQPRI 184 (481)
T ss_dssp HHCGG----GSTTHHHHHHHHHHHHHHHHTT---------TCCEEEEEECHHH
T ss_pred HhCCC----CCHHHHHHHHHHHHHHHHHhCC---------CCCeEEEccCchH
Confidence 3 442 2445556666666777666662 3667778888653
|
| >4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00054 Score=70.70 Aligned_cols=136 Identities=11% Similarity=0.088 Sum_probs=87.1
Q ss_pred CCCccchHHHHHHHHhCCCCEEEEccccCcCC-----C-----CCceeeccCcchHHHHHHHHHHcCCEEEEecCceecc
Q 009890 52 RSTPEMWPDLIQKSKDGGLDVIETYVFWNLHE-----P-----VRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCA 121 (523)
Q Consensus 52 R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HE-----p-----~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~a 121 (523)
-+.++.|+++++.||++|+++|=. .|.+|+ | .++.+... +.-|+.|+++|+++||+|.+.. |-.+
T Consensus 50 nWd~~eW~~~~~~mK~~GikyvIl--~~~~~~gf~~~pS~~~~~~~~~~p~-~Dlv~~~l~aa~k~Gmkv~~Gl--y~S~ 124 (340)
T 4h41_A 50 NWGEKEWDLDFQHMKRIGIDTVIM--IRSGYRKFMTYPSPYLLKKGCYMPS-VDLVDMYLRLAEKYNMKFYFGL--YDSG 124 (340)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEE--SCSEETTEESSCCHHHHHTTCCCCS-BCHHHHHHHHHHHTTCEEEEEC--CBCS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEE--EEEeeCCeeccCcccccccCccCCc-ccHHHHHHHHHHHhCCeEEEec--CCCh
Confidence 368999999999999999997743 344554 1 12333332 2237888999999999998865 3332
Q ss_pred ccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCcccHHHHHH
Q 009890 122 EWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKW 201 (523)
Q Consensus 122 Ew~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~ 201 (523)
.| |-.. +. ....+..++.+.++..++. .+...+.+|.|-||..... .....+.+.
T Consensus 125 ~~-------W~~~--d~------~~e~e~~~~~i~El~~~Yg------~~h~af~GWYi~~Ei~~~~----~~~~~~~~~ 179 (340)
T 4h41_A 125 RY-------WDTG--DL------SWEIEDNKYVIDEVWKMYG------EKYKSFGGWYISGEISRAT----KGAIDAFRA 179 (340)
T ss_dssp HH-------HHHS--CG------GGGHHHHHHHHHHHHHHTT------TTCTTEEEEEECCCCSSCC----TTHHHHHHH
T ss_pred hh-------cCCC--CH------HHHHHHHHHHHHHHHHHhh------ccCCCeeEEEeccccCchh----hhHHHHHHH
Confidence 21 3221 10 1124555666666666554 2234799999999997542 234566777
Q ss_pred HHHHHHhcCCCcceEE
Q 009890 202 AAGMALSLDTGVPWVM 217 (523)
Q Consensus 202 l~~~~~~~g~~vP~~~ 217 (523)
|.+.++++.-+.|.+.
T Consensus 180 l~~~lk~ls~~lp~~I 195 (340)
T 4h41_A 180 MGKQCKDISNGLPTFI 195 (340)
T ss_dssp HHHHHHHHTTSCCEEE
T ss_pred HHHHHHHhcCCCceEE
Confidence 7777777666667543
|
| >3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00014 Score=77.91 Aligned_cols=109 Identities=15% Similarity=0.121 Sum_probs=86.8
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCC-ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVR-NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~-G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++|+.||++|+|+.|+-+.|...+|.. |++|-.|-.-.+++|+.|.++||..++-. -.=.+|.||.+
T Consensus 66 hry~eDi~Lm~elG~~~yRfSIsWsRI~P~g~g~~N~~Gl~fY~~lid~l~~~GIeP~vTL--------~H~dlP~~L~~ 137 (458)
T 3ta9_A 66 HLYREDIELMKEIGIRSYRFSTSWPRILPEGKGRVNQKGLDFYKRLVDNLLKANIRPMITL--------YHWDLPQALQD 137 (458)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHHT
T ss_pred HhHHHHHHHHHHcCCCEEEecCcHHHhCcCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEe--------cCCCCCHhHHh
Confidence 4589999999999999999999999999997 99998888889999999999999988766 23468999976
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccc
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg 185 (523)
..|- .|+...+.-.+|.+.+++++++ -|-.|-.=||..
T Consensus 138 ~GGW----~nr~~v~~F~~YA~~~f~~fgd---------rVk~W~T~NEP~ 175 (458)
T 3ta9_A 138 KGGW----TNRDTAKYFAEYARLMFEEFNG---------LVDLWVTHNEPW 175 (458)
T ss_dssp TTGG----GSHHHHHHHHHHHHHHHHHTTT---------TCCEEEEEECHH
T ss_pred cCCC----CCHHHHHHHHHHHHHHHHHhcC---------cCCEEEEecCcc
Confidence 5442 3456666666777777777663 255666777754
|
| >3kl0_A Glucuronoxylanase XYNC; alpha beta barrel, (beta/alpha)8 barrel (beta/alpha)8 + beta motif family, hydrolase; HET: TAR HIS; 1.64A {Bacillus subtilis} PDB: 3gtn_A* 3kl3_A* 3kl5_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.033 Score=58.55 Aligned_cols=301 Identities=16% Similarity=0.128 Sum_probs=159.8
Q ss_pred EEEEEEEEEeeC---CCCCccchHHHHHH-HHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEe
Q 009890 39 KRRVLISGSIHY---PRSTPEMWPDLIQK-SKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLR 114 (523)
Q Consensus 39 k~~~l~sG~iHy---~R~~~~~W~d~l~k-~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr 114 (523)
+.+.=++|+++- ...+++.=..++.. .+.+|++.+|+.+-++. .+|+ ....+++.|++.||.++.-
T Consensus 14 Q~i~GfG~~~~~~~~~~l~~~~r~~lF~~~~~g~g~s~~R~~ig~~~-------~~~~---~~~~~~k~A~~~~~~i~as 83 (401)
T 3kl0_A 14 QVIRGFGGMNHPAWAGDLTAAQRETAFGNGQNQLGFSILRIHVDENR-------NNWY---KEVETAKSAVKHGAIVFAS 83 (401)
T ss_dssp EECCEEEEECCHHHHCCCCHHHHHHHHCCSTTCCCCCEEEEEECSSG-------GGGG---GGHHHHHHHHHTTCEEEEE
T ss_pred eEEEEEEeechHHHHhhCCHHHHHHhcCCCCCCCceEEEEEEeCCCc-------ccch---hHHHHHHHHHhCCCEEEEe
Confidence 333447776531 23333322233332 24689999999998763 3444 2468999999999999887
Q ss_pred cCceeccccCCCCCCccccCCC---C-eeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccc
Q 009890 115 IGPYVCAEWNFGGFPLWLHFIP---G-IQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSA 190 (523)
Q Consensus 115 ~GPyi~aEw~~GG~P~WL~~~p---~-i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~ 190 (523)
| | ..|.|+.... + ..-..-.+.|.+...+|+.+.++.++++++ +|=++-+-||.......
T Consensus 84 p-------W---spP~WMk~~~~~~g~~~~g~L~~~~y~~yA~Y~~k~i~~y~~~Gi------~i~~is~qNEP~~~~~~ 147 (401)
T 3kl0_A 84 P-------W---NPPSDMVETFNRNGDTSAKRLKYNKYAAYAQHLNDFVTFMKNNGV------NLYAISVQNEPDYAHEW 147 (401)
T ss_dssp E-------S---CCCGGGEEEEEETTEEEEEEECGGGHHHHHHHHHHHHHHHHHTTC------CCSEEESCSCTTSCTTS
T ss_pred c-------C---CCCHHhccCCCcCCCccCCcCChHHHHHHHHHHHHHHHHHHHCCC------CeEEEeeecccCCCCCC
Confidence 7 4 3799997421 1 111112366778888888888888886654 78777778998653211
Q ss_pred cCcccHHHHHHHHHHHHhcCCCcceEEccCCCC-C---Ccccc------CCC--Cc--ccCCCC--------CCCCCCCc
Q 009890 191 YGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDA-P---DPIIN------TCN--GF--YCDQFT--------PNSNNKPK 248 (523)
Q Consensus 191 ~g~~~~~y~~~l~~~~~~~g~~vP~~~~~~~~~-p---~~vi~------~~n--g~--~~~~~~--------~~~~~~P~ 248 (523)
..-..++-.+++++.... +.+-++.++.... + +++++ ... ++ |+..+. ...|+|++
T Consensus 148 ~~~t~~~~~~fi~~~lg~--~~tkI~~~d~~~~~~~~~~~il~D~~a~~~v~gia~H~Y~~~~~~l~~~~~~~~~~~K~l 225 (401)
T 3kl0_A 148 TWWTPQEILRFMRENAGS--INARVIAPESFQYLKNLSDPILNDPQALANMDILGTHLYGTQVSQFPYPLFKQKGAGKDL 225 (401)
T ss_dssp CCCCHHHHHHHHHHTGGG--CSSEEEEEEESSCCHHHHHHHHTCHHHHHTCSEEEEECTTCCGGGSCCHHHHHHCTTCEE
T ss_pred CCCCHHHHHHHHHHhccc--cCceEEecchhhhhhhhhHHHhcCHhHHhhCcEEEEEcCCCCcccccchhHHhhCCCCeE
Confidence 111223334444444332 3344455443211 1 11111 111 22 222221 22468999
Q ss_pred eEeeeccccccccCCCCCCCCHHHHHHHHHHHHhcCCeeeeeeeeccCCCCCCCCCCCcccccccCCCCCCcCCCCCChh
Q 009890 249 MWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLIRQPK 328 (523)
Q Consensus 249 ~~tE~~~Gwf~~wG~~~~~r~~~d~~~~~~~~~~~g~s~~nyYM~hGGTNfG~~~G~~~~~TSYDy~Api~E~G~~~~pK 328 (523)
..||...++.+..+.. .-..+.+++..+.+.+..+. . +-|++.=. ..+| .|+.+.|.+ ++.
T Consensus 226 w~TE~~~~~~~~~~~~-~w~~al~~a~~I~~~l~~~~-~-~a~v~Wnl------------~~~~---Gp~~~~G~~-~~~ 286 (401)
T 3kl0_A 226 WMTEVYYPNSDTNSAD-RWPEALDVSQHIHNAMVEGD-F-QAYVWWYI------------RRSY---GPMKEDGTI-SKR 286 (401)
T ss_dssp EEEEECCSCCCTTCTT-CTTTTHHHHHHHHHHHHTSC-C-SEEEEEES------------BSTT---SSBCTTSSB-CHH
T ss_pred EEEecccCCCCCcccc-chhHHHHHHHHHHHHHHhcc-C-cEEEEccc------------ccCC---CCccCCCeE-chH
Confidence 9999877654332211 12345667666655554432 1 22333211 1222 377788988 688
Q ss_pred HHHHHHHHHHHHHhhhcccCCCCCCCCCCCCceEEEEEcCCCceEEEEEeCCCC-eeEEEEECC
Q 009890 329 WGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVYKTGSGLCSAFLANIGTN-SDVTVKFNG 391 (523)
Q Consensus 329 y~~lk~lh~~i~~~~~~L~~~~~~~~~lg~~~~~~v~~~~~~~~~~Fl~N~~~~-~~~~V~f~~ 391 (523)
|..|....+||+.-...+.... ....+.....|.. +|.-++-+.|..+. ..+++.+.+
T Consensus 287 ~y~l~hfSrfIrPGa~RI~s~~----~~~~~~~~~A~~~-dg~~vvV~~N~~~~~~~~~~~l~g 345 (401)
T 3kl0_A 287 GYNMAHFSKFVRPGYVRIDATK----NPNANVYVSAYKG-DNKVVIVAINKSNTGVNQNFVLQN 345 (401)
T ss_dssp HHHHHHHHTTSCTTCEEEEECS----CSBTTEEEEEEEE-TTEEEEEEEECSSSCEEEEEEEES
T ss_pred HHHHHHhhcccCCCCEEEeccc----CCCCCeEEEEEEC-CCeEEEEEEcCCCCcEEEEEEEcC
Confidence 9888888888774322222111 0012234445666 44444445665433 334554444
|
| >3gyc_A Putative glycoside hydrolase; YP_001304622.1, structural GEN joint center for structural genomics, JCSG; HET: MSE; 1.85A {Parabacteroides distasonis atcc 8503} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0037 Score=63.46 Aligned_cols=146 Identities=14% Similarity=0.240 Sum_probs=106.4
Q ss_pred CccchHHHHHHHHhCCCCEEEEc-----cc------cCcCC-------CCCceeeccCcchHHHHHHHHHHcCCEEEEec
Q 009890 54 TPEMWPDLIQKSKDGGLDVIETY-----VF------WNLHE-------PVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 54 ~~~~W~d~l~k~Ka~GlN~V~tY-----vf------Wn~HE-------p~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
|-+.|+..++.+++-|+|+|++- +| |-+.. -.||-+.-.|+..|..|++.|+++|++|||--
T Consensus 35 pf~DLD~afdEavERGYNTVRIcAmP~LLf~~p~~l~~l~pl~gQrrW~~pg~~evdgr~~L~elf~aAk~hd~~ViLSS 114 (393)
T 3gyc_A 35 GYEDWDQVLDELSERGYNAIRIDAYPHLIAENPMKKWLLKEVWNQQDWGSPDMNEVQVQPNLNLFLSKCKERDIKVGLSS 114 (393)
T ss_dssp SCSCHHHHHHHHHHTTCCEEEEECCHHHHHHCTTCCEEECCSCSSSSSSCSSCEEECCTTHHHHHHHHHHHTTCEEEEEC
T ss_pred ChhHHHHHHHHHHHcCCCeEEeccccceeecCCcchhhccccccccccCCCCCceechHHHHHHHHHHHHHcCCEEEEeh
Confidence 67889999999999999999972 12 32222 23555666778899999999999999999975
Q ss_pred CceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccc-----
Q 009890 116 GPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSA----- 190 (523)
Q Consensus 116 GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~----- 190 (523)
|..+.|. ..|..-..+ +...+-+..+++.|++++|. -.|..+-|.||..+...+
T Consensus 115 ---------------WYQQsps-eal~a~~R~-e~lA~aw~~lLdfi~~~GL~----drIAyVELhNEv~~~~la~~~~~ 173 (393)
T 3gyc_A 115 ---------------WYRLDVD-EVCLKLDTP-EKLADCWLTILRSIEEDGLL----DTILYVDLCNEWPGDSWAPFFAK 173 (393)
T ss_dssp ---------------CCCCBTT-CGGGGCCSH-HHHHHHHHHHHHHHHHTTCG----GGEEEEESSTTTTCTTTCHHHHT
T ss_pred ---------------hhhcCHH-HHHhhhccH-HHHHHHHHHHHHHHHHccch----hceeeEeeeccccCcccccccCc
Confidence 7556665 333332233 33445566777888988874 379999999998653211
Q ss_pred ----------cCcccHHHHHHHHHHHHhcCCCcceEEccC
Q 009890 191 ----------YGAAGKSYIKWAAGMALSLDTGVPWVMCQQ 220 (523)
Q Consensus 191 ----------~g~~~~~y~~~l~~~~~~~g~~vP~~~~~~ 220 (523)
..+..+.||+..-+..++.-.++|+..|..
T Consensus 174 ~~~~vg~~a~~~e~l~~~lee~v~~lR~~hP~lpvt~SyT 213 (393)
T 3gyc_A 174 TYPNVGWGNWYKEESLRWMKTSLEKMRQVYPDMPFLYSFD 213 (393)
T ss_dssp TCTTTCTTCTTSHHHHHHHHHHHHHHHTTCTTSCEECCBC
T ss_pred cccccccchhhhHhhhHHHHHHHHHHHHhCCCCeeeeeec
Confidence 112457788888888999999999988874
|
| >2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.11 Score=55.38 Aligned_cols=242 Identities=18% Similarity=0.234 Sum_probs=123.5
Q ss_pred eeCCCCCccchHHHHHHHHhCCCCEEEEc-------cccCcCCCCCceeeccCcch-HHHHHHHHHHcCCEEEEecCcee
Q 009890 48 IHYPRSTPEMWPDLIQKSKDGGLDVIETY-------VFWNLHEPVRNQYNFEGRYD-LVKFVKLVAEAGLYAHLRIGPYV 119 (523)
Q Consensus 48 iHy~R~~~~~W~d~l~k~Ka~GlN~V~tY-------vfWn~HEp~~G~ydF~G~~d-L~~fl~la~~~GL~Vilr~GPyi 119 (523)
+.+.+..++.|- +.+|++|+..|-.- -.|..--.....-+-.+.+| +..+.+.|+++||.+-+ |.
T Consensus 100 F~p~~fDp~~Wa---~~~k~AGakyvvlTaKHHDGF~lwpSk~t~~ns~~~~pkrDlv~El~~A~rk~Glk~Gl----Y~ 172 (455)
T 2zxd_A 100 FTAEKWDPQEWA---DLFKKAGAKYVIPTTKHHDGFCLWGTKYTDFNSVKRGPKRDLVGDLAKAVREAGLRFGV----YY 172 (455)
T ss_dssp CCCTTCCHHHHH---HHHHHTTCSEEEEEEECTTCCBSSCCSSCSCBTTTSTTCSCHHHHHHHHHHHTTCEEEE----EE
T ss_pred CCcccCCHHHHH---HHHHHhCCCEEEEEeeccCCccccCCCCCCCcccccCCCCChHHHHHHHHHHcCCeEEE----Ee
Confidence 344566778785 46788899866542 23554332111111223456 56788999999998776 44
Q ss_pred cc--ccCCCCCC-ccccCCCCe-eeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCccc
Q 009890 120 CA--EWNFGGFP-LWLHFIPGI-QFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAG 195 (523)
Q Consensus 120 ~a--Ew~~GG~P-~WL~~~p~i-~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~ 195 (523)
.+ +|. .| .|..+..+. ..+..++.|.+.+..=+++|+...+ |.++|- +-+... .+.-..
T Consensus 173 S~~~dW~---~p~~~~~~~~~~y~~~~~~~~y~~~~~~Ql~ELlt~Y~----------pd~lWf-Dg~~~~---~~~w~~ 235 (455)
T 2zxd_A 173 SGGLDWR---FTTEPIRYPEDLSYIRPNTYEYADYAYKQVMELVDLYL----------PDVLWN-DMGWPE---KGKEDL 235 (455)
T ss_dssp ECSCCGG---GCCSCCCSGGGGGTCSCCSHHHHHHHHHHHHHHHHHHC----------CSEEEE-ESCCCG---GGTTHH
T ss_pred cCCcccc---CcccccccccccccCCCccHHHHHHHHHHHHHHHhhcC----------CcEEEE-CCCCCc---cchhhH
Confidence 32 442 23 333221110 0111256666666555555555554 333332 211100 000012
Q ss_pred HHHHHHHHHHHHhcCCCcceEEccCCCCCCccccCCCCcc-cCC-CC-CCCCCCCceEeeeccccccccCCC-----CCC
Q 009890 196 KSYIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFY-CDQ-FT-PNSNNKPKMWTENWSGWFLSFGGA-----VPY 267 (523)
Q Consensus 196 ~~y~~~l~~~~~~~g~~vP~~~~~~~~~p~~vi~~~ng~~-~~~-~~-~~~~~~P~~~tE~~~Gwf~~wG~~-----~~~ 267 (523)
.++.++ +++...++. .+.....+ ..++. |+. .. +.. ..+.-|-... +--..||-. ...
T Consensus 236 ~~~~~~----~~~~~P~~v--vn~R~g~~------~gd~~t~e~~~~~~~~-~~~~~WE~~~-ti~~sWgY~~~~~~~~~ 301 (455)
T 2zxd_A 236 KYLFAY----YYNKHPEGS--VNDRWGVP------HWDFKTAEYHVNYPGD-LPGYKWEFTR-GIGLSFGYNRNEGPEHM 301 (455)
T ss_dssp HHHHHH----HHHHCTTCC--BCSCSSSS------CCSSEEEBTTBBCCSS-CCSSCEEEEE-ESSSCSSCCTTCCGGGS
T ss_pred HHHHHH----HHHhCCCEE--EEcccCCC------cccccccccccCCcCc-CCCCCceeee-eECCCCCcCCCCCccCc
Confidence 333334 443332221 12211000 01111 111 11 111 1122232211 111345532 235
Q ss_pred CCHHHHHHHHHHHHhcCCee-eeeeeeccCCCCCCCCCCCcccccccCCCCCCcCCCCCChhHHHHHHHHHHHHHhhhcc
Q 009890 268 RPVEDLAFAVARFFQRGGTF-QNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAAL 346 (523)
Q Consensus 268 r~~~d~~~~~~~~~~~g~s~-~nyYM~hGGTNfG~~~G~~~~~TSYDy~Api~E~G~~~~pKy~~lk~lh~~i~~~~~~L 346 (523)
++++++...+...+++||++ +|. |.+.+|.+.+.....|+++...|+..+.++
T Consensus 302 ks~~~Li~~lv~~VskgGnlLLNv--------------------------gP~~dG~I~~~~~~~L~eiG~wl~~ngEaI 355 (455)
T 2zxd_A 302 LSVEQLVYTLVDVVSKGGNLLLNV--------------------------GPKGDGTIPDLQKERLLGLGEWLRKYGDAI 355 (455)
T ss_dssp CCHHHHHHHHHHHHHTTEEEEEEE--------------------------CCCTTSCCCHHHHHHHHHHHHHHHHHGGGT
T ss_pred CCHHHHHHHHHHHHhcCCeEEEEe--------------------------CCCCCCCcCHHHHHHHHHHHHHHHhcccee
Confidence 79999999999999999884 343 234678888889999999999999999998
Q ss_pred cCCCCCC
Q 009890 347 VATDPTY 353 (523)
Q Consensus 347 ~~~~~~~ 353 (523)
-.+.|-.
T Consensus 356 Ygt~~w~ 362 (455)
T 2zxd_A 356 YGTSVWE 362 (455)
T ss_dssp TTCBCCS
T ss_pred eCCcccc
Confidence 8776543
|
| >3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00088 Score=69.15 Aligned_cols=157 Identities=16% Similarity=0.215 Sum_probs=108.0
Q ss_pred EEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEE--ccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCcee
Q 009890 42 VLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIET--YVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYV 119 (523)
Q Consensus 42 ~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~t--YvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi 119 (523)
|.++.++........ ..+.| ..-+|.|.. -.-|...||++|+|+|+ ..+++++.|+++||.|.=.+ .+
T Consensus 15 F~~G~Av~~~~l~~~-~~~~~----~~~Fn~it~EN~mKw~~~ep~~G~~~f~---~aD~~v~~a~~ngi~vrGHt--Lv 84 (341)
T 3ro8_A 15 FLIGNAISAEDLEGT-RLELL----KMHHDVVTAGNAMKPDALQPTKGNFTFT---AADAMIDKVLAEGMKMHGHV--LV 84 (341)
T ss_dssp CEEEEEECGGGGSHH-HHHHH----HHHCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHTTCEEEEEE--EE
T ss_pred CeEeEecChhhcCcH-HHHHH----HHhCCEEEECcccchhHhcCCCCccchH---HHHHHHHHHHhCCCEEEecc--cc
Confidence 567888876665433 22322 335888877 67799999999999999 89999999999999884221 11
Q ss_pred ccccCCCCCCccccCCCC--eeee-cCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccc--------
Q 009890 120 CAEWNFGGFPLWLHFIPG--IQFR-TDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNID-------- 188 (523)
Q Consensus 120 ~aEw~~GG~P~WL~~~p~--i~~R-t~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~-------- 188 (523)
|- -..|.|+....+ -... -+.+..++.++++++.++.+.+ |-|..|-|=||-=+-.
T Consensus 85 ---Wh-~q~P~W~~~~~d~~g~~~~~s~~~l~~~~~~hI~~vv~rYk---------g~i~~WDVvNE~~~~~~~~p~~~~ 151 (341)
T 3ro8_A 85 ---WH-QQSPAWLNTKKDDNNNTVPLGRDEALDNLRTHIQTVMKHFG---------NKVISWDVVNEAMNDNPSNPADYK 151 (341)
T ss_dssp ---CS-SSCCGGGTEEECTTSCEEECCHHHHHHHHHHHHHHHHHHHG---------GGSSEEEEEECCBCSSCSCTTCTG
T ss_pred ---Cc-ccCCHHHhccCccccccCCCCHHHHHHHHHHHHHHHHHHcC---------CcceEEEEecccccCCCCcccccc
Confidence 32 258999985211 0011 1234577889999999999887 4688999999963211
Q ss_pred ccc------CcccHHHHHHHHHHHHhc-----CCCcceEEccCC
Q 009890 189 SAY------GAAGKSYIKWAAGMALSL-----DTGVPWVMCQQS 221 (523)
Q Consensus 189 ~~~------g~~~~~y~~~l~~~~~~~-----g~~vP~~~~~~~ 221 (523)
..+ ..-|.+|+..+=++|++. +.++-++.++-+
T Consensus 152 ~~~r~s~w~~~lG~d~i~~AF~~Ar~a~~~~pdp~akL~~NDYn 195 (341)
T 3ro8_A 152 ASLRQTPWYQAIGSDYVEQAFLAAREVLDENPSWNIKLYYNDYN 195 (341)
T ss_dssp GGBCCCHHHHHHCTTHHHHHHHHHHHHHHHSTTCCCEEEEEESC
T ss_pred ccccCChHHHhcCHHHHHHHHHHHHHhcccCCCCCcEEEEecCC
Confidence 011 123668999888888886 557778887753
|
| >4atd_A Raucaffricine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.10A {Rauvolfia serpentina} PDB: 4a3y_A 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00033 Score=76.05 Aligned_cols=109 Identities=14% Similarity=0.082 Sum_probs=83.4
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCC---ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVR---NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWL 132 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~---G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL 132 (523)
..|+++|+.||++|+|+.|+-+-|...+|.. |++|-+|-.-.+++|+.|.++||..++-. -.=.+|.||
T Consensus 76 hrYkEDi~Lm~elG~~~yRfSIsWsRI~P~g~~~g~~N~~Gl~~Y~~lid~l~~~GI~P~VTL--------~H~dlP~~L 147 (513)
T 4atd_A 76 HLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTL--------FHWDVPQAL 147 (513)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCHHHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeCcHHHcCCCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe--------cCCCCcHHH
Confidence 3489999999999999999999999999987 89999998899999999999999988765 244689999
Q ss_pred cCC-CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccc
Q 009890 133 HFI-PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185 (523)
Q Consensus 133 ~~~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg 185 (523)
.+. .|- .|+...++-.+|.+.+++.+++ -|-.|-.=||..
T Consensus 148 ~~~yGGW----~nr~~v~~F~~YA~~~f~~fgd---------rVk~WiT~NEp~ 188 (513)
T 4atd_A 148 EDEYGGF----LSPRIVDDFCEYAELCFWEFGD---------RVKHWMTLNEPW 188 (513)
T ss_dssp HHHHCGG----GSTTHHHHHHHHHHHHHHHHTT---------TCCEEEEEECHH
T ss_pred HHHcCCc----CCHHHHHHHHHHHHHHHHHhcC---------cCceEEEccCcc
Confidence 753 442 2344445555566666666652 245566667754
|
| >3ptm_A Beta-glucosidase OS4BGlu12; beta-alpha barrel, glycosidase, hydrolase; HET: G2F; 2.40A {Oryza sativa} PDB: 3ptk_A* 3ptq_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00036 Score=75.64 Aligned_cols=109 Identities=14% Similarity=0.112 Sum_probs=84.0
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCC---ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVR---NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWL 132 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~---G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL 132 (523)
..|+++|+.||++|+|+.|+-+-|.-.+|.. |+.|.+|-.-.+++|+.|.++||..++-+ -.=.+|.||
T Consensus 88 hrykEDi~Lm~elG~~~yRfSIsWsRI~P~g~~~g~vN~~Gl~fY~~lid~l~~~GIeP~VTL--------~HwDlP~~L 159 (505)
T 3ptm_A 88 HLYKEDVRLMKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFITL--------FHWDSPQAL 159 (505)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCHHHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeeccHHHcCcCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe--------cCCCCcHHH
Confidence 3489999999999999999999999999987 89999999899999999999999988765 244689999
Q ss_pred cCC-CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccc
Q 009890 133 HFI-PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185 (523)
Q Consensus 133 ~~~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg 185 (523)
.+. .|- .|+...+.-.+|.+.+++++++ -|-.|-.=||..
T Consensus 160 ~~~yGGW----~nr~~v~~F~~YA~~~f~~fgD---------rVk~W~T~NEp~ 200 (505)
T 3ptm_A 160 EDKYNGF----LSPNIINDFKDYAEICFKEFGD---------RVKNWITFNEPW 200 (505)
T ss_dssp HHHHCGG----GSTHHHHHHHHHHHHHHHHHTT---------TCCEEEEEECHH
T ss_pred HHhcCCc----CCHHHHHHHHHHHHHHHHHhCc---------cCceEEEecCcc
Confidence 763 442 2345555556666666666652 255666667753
|
| >3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00039 Score=74.92 Aligned_cols=111 Identities=15% Similarity=0.140 Sum_probs=84.6
Q ss_pred ccchHHHHHHHHhCCCCEEEEccccCcCCCCC--ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccc
Q 009890 55 PEMWPDLIQKSKDGGLDVIETYVFWNLHEPVR--NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWL 132 (523)
Q Consensus 55 ~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~--G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL 132 (523)
-..|+++|+.||++|+|+.|+-+.|...+|.. |+.|-.|-.-.+++|+.|.++||..++-. -.=.+|.||
T Consensus 73 Yhry~eDi~Lm~elG~~~yRfSIsWsRI~P~G~~g~~N~~Gl~fY~~lid~l~~~GIeP~VTL--------~H~DlP~~L 144 (481)
T 3qom_A 73 YHRYPEDIELFAEMGFKCFRTSIAWTRIFPNGDESEPNEAGLQFYDDLFDECLKNGIQPVVTL--------AHFEMPYHL 144 (481)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCHHHHSSSSCCSSCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEecCcHHHcCcCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEE--------ccCCCCHHH
Confidence 34589999999999999999999999999985 78999888889999999999999988765 244689999
Q ss_pred cCC-CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 133 HFI-PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 133 ~~~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
.+. .|- .|+...++..+|.+.+++++++ -|-.|-.=||...
T Consensus 145 ~~~yGGW----~nr~~v~~F~~YA~~~f~~fgd---------rVk~W~T~NEp~~ 186 (481)
T 3qom_A 145 VKQYGGW----RNRKLIQFYLNFAKVCFERYRD---------KVTYWMTFNEINN 186 (481)
T ss_dssp HHHHCGG----GSTHHHHHHHHHHHHHHHHTTT---------TCCEEEEETTGGG
T ss_pred HhhcCCC----CCHHHHHHHHHHHHHHHHHhCC---------cCCEEEEccCccH
Confidence 653 442 2345555566666666666652 3556666677543
|
| >3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00075 Score=72.82 Aligned_cols=96 Identities=14% Similarity=0.171 Sum_probs=77.1
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC--CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV--RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH 133 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~--~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~ 133 (523)
..|+++|+.||++|+|+.|+-+-|.-.+|. +|++|-+|-.--+++|+.|.++||..++-. -.=.+|.||.
T Consensus 66 hry~EDi~Lm~elG~~~yRfSIsWsRI~P~G~~g~~N~~Gl~fY~~lId~Ll~~GIeP~VTL--------~H~DlP~~L~ 137 (487)
T 3vii_A 66 HLYKEDVKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTM--------YHWDLPQALQ 137 (487)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCHHHHSTTSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeeCCHHHcCcCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEE--------ecCCCcHHHH
Confidence 348999999999999999999999999998 899999998889999999999999987765 2345899997
Q ss_pred CCCCeeeecCChhHHHHHHHHHHHHHHHHH
Q 009890 134 FIPGIQFRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 134 ~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
+..|- .|+...+.-.+|.+.+++.++
T Consensus 138 ~~GGW----~nr~~v~~F~~YA~~~f~~fg 163 (487)
T 3vii_A 138 DLGGW----PNLVLAKYSENYARVLFKNFG 163 (487)
T ss_dssp TTTST----TSTHHHHHHHHHHHHHHHHHT
T ss_pred HcCCC----CCHHHHHHHHHHHHHHHHHhc
Confidence 65443 245555555566666666655
|
| >2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0036 Score=68.18 Aligned_cols=163 Identities=10% Similarity=0.119 Sum_probs=107.8
Q ss_pred EEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEE--ccccCcCCCCCc------eeeccCcchHHHHHHHHHHcCCEEEE
Q 009890 42 VLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIET--YVFWNLHEPVRN------QYNFEGRYDLVKFVKLVAEAGLYAHL 113 (523)
Q Consensus 42 ~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~t--YvfWn~HEp~~G------~ydF~G~~dL~~fl~la~~~GL~Vil 113 (523)
|.++..+...+.......+.|. .-||.|.. -.=|...||+|| +|+|+ ..+++++.|+++||.|.-
T Consensus 192 f~~G~av~~~~l~~~~~~~~~~----~~Fn~it~eN~mKw~~~e~~~g~~~~~~~~~f~---~aD~~v~~A~~ngi~vrG 264 (540)
T 2w5f_A 192 FRVGSVLNSGTVNNSSIKALIL----REFNSITCENEMKPDATLVQSGSTNTNIRVSLN---RAASILNFCAQNNIAVRG 264 (540)
T ss_dssp CEEEEEECTTGGGCHHHHHHHH----HHCSEEEESSTTSHHHHEEEEEEETTEEEECCT---TTHHHHHHHHHTTCEEEE
T ss_pred CCEEEEechhhcCCHHHHHHHH----HhCCeecccccccccccccCCCCccccceechh---HHHHHHHHHHHCCCEEEE
Confidence 5567676654443222333332 36888877 356999999999 49998 789999999999999732
Q ss_pred ecCceeccccCCCCCCccccCCCC--eeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccccc--
Q 009890 114 RIGPYVCAEWNFGGFPLWLHFIPG--IQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDS-- 189 (523)
Q Consensus 114 r~GPyi~aEw~~GG~P~WL~~~p~--i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~-- 189 (523)
.+ .| |-. -.|.|+...+. -.-..+.+..++.++.+++.++.++|.+ + .++.|++|-|=||--+...
T Consensus 265 Ht--Lv---Whs-q~P~W~~~~~~~~~g~~~~~~~l~~~l~~~I~~vv~ry~g~--y--~~~~i~~WDVvNE~~~~~~~~ 334 (540)
T 2w5f_A 265 HT--LV---WHS-QTPQWFFKDNFQDNGNWVSQSVMDQRLESYIKNMFAEIQRQ--Y--PSLNLYAYDVVNAAVSDDANR 334 (540)
T ss_dssp EE--EE---CSS-SCCGGGGBTTSSTTSCBCCHHHHHHHHHHHHHHHHHHHHHH--C--TTSCEEEEEEEESCSCSCHHH
T ss_pred EE--EE---cCC-CCchHHhccCcccccCcCCHHHHHHHHHHHHHHHHHHhccc--C--CCCcEEEEEEecCcccCCccc
Confidence 21 11 322 47999975320 0000123457889999999999999832 1 1335999999999754220
Q ss_pred --ccC----------c------ccH-HHHHHHHHHHHhcCCC-cceEEccCC
Q 009890 190 --AYG----------A------AGK-SYIKWAAGMALSLDTG-VPWVMCQQS 221 (523)
Q Consensus 190 --~~g----------~------~~~-~y~~~l~~~~~~~g~~-vP~~~~~~~ 221 (523)
.++ . .|. +|+..+-+.|++.+.. +.++.++-+
T Consensus 335 ~~~~g~~r~~~~~~~~s~w~~~~G~~~~i~~aF~~Ar~~dP~~a~L~~NDyn 386 (540)
T 2w5f_A 335 TRYYGGAREPGYGNGRSPWVQIYGDNKFIEKAFTYARKYAPANCKLYYNDYN 386 (540)
T ss_dssp HHHSTTCCCBSSBTTBBHHHHHHSSTTHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred cccccccccccccccCCHHHHhhCcHHHHHHHHHHHHHhCCccceEEEEecc
Confidence 001 0 122 6999999999999986 788887753
|
| >3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.068 Score=59.61 Aligned_cols=286 Identities=11% Similarity=-0.015 Sum_probs=157.0
Q ss_pred EEEEEEEEeeCC-------CCCccchHHHHHHH----HhCCCCEEEEcccc---CcCCCCCceeeccCc-----chHHHH
Q 009890 40 RRVLISGSIHYP-------RSTPEMWPDLIQKS----KDGGLDVIETYVFW---NLHEPVRNQYNFEGR-----YDLVKF 100 (523)
Q Consensus 40 ~~~l~sG~iHy~-------R~~~~~W~d~l~k~----Ka~GlN~V~tYvfW---n~HEp~~G~ydF~G~-----~dL~~f 100 (523)
.+.=++|++.-. +++++.=+++|+.+ +-+|++.+|+-+-= .....++..|+...+ .....|
T Consensus 26 ti~GFG~s~t~~a~a~~l~~l~~~~r~~il~~lFs~~~Gigls~~R~~IG~~dfs~~~~~~~~f~~~~d~~~~~~~~i~~ 105 (656)
T 3zr5_A 26 EFDGIGAVSGGGATSRLLVNYPEPYRSEILDYLFKPNFGASLHILKVEIGGDGQTTDGTEPSHMHYELDENYFRGYEWWL 105 (656)
T ss_dssp ECCEEEEEECSSCTTTTTTTCCTTHHHHHHHHHHSTTTSSCCSEEEEEECCSSBCSSSBCCCSCSSTTCCCSCCSSHHHH
T ss_pred EEeEEEEeCCchHHHHHHHhCCHHHHHHHHHHHcCCCCCCeeEEEEEEecCCCccCCCCCCcCCccccccchhhchhHHH
Confidence 334477777521 23444434556665 46799999997731 222222333433322 236889
Q ss_pred HHHHHHcC--CEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHH-HHhcccccccCCceEe
Q 009890 101 VKLVAEAG--LYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDM-MKQEKLYASQGGPIIL 177 (523)
Q Consensus 101 l~la~~~G--L~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~-ik~~~l~~~~gGpII~ 177 (523)
|+.|++.+ |+++.-| | ..|.|+..... + .+.|.+....|+.+.++. ++++++ +|=+
T Consensus 106 lk~A~~~~p~lki~asp-------W---SpP~WMK~n~~--l---~~~~y~~yA~Ylvk~i~~y~~~~GI------~i~~ 164 (656)
T 3zr5_A 106 MKEAKKRNPDIILMGLP-------W---SFPGWLGKGFS--W---PYVNLQLTAYYVVRWILGAKHYHDL------DIDY 164 (656)
T ss_dssp HHHHHHHCTTCEEEEEE-------S---CBCGGGGTTSS--C---TTSSHHHHHHHHHHHHHHHHHHHCC------CCCE
T ss_pred HHHHHHhCCCcEEEEec-------C---CCcHHhccCCC--C---ChHHHHHHHHHHHHHHHHHHHhcCC------ceEE
Confidence 99998876 5666655 4 38999987433 2 245666666777776666 465555 7878
Q ss_pred ccccccccccccccCcccHHHHHHHHHHHHhcCCC-cceEEccCCCC--CCcccc------CCCC----cccCCC--CCC
Q 009890 178 SQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTG-VPWVMCQQSDA--PDPIIN------TCNG----FYCDQF--TPN 242 (523)
Q Consensus 178 ~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~-vP~~~~~~~~~--p~~vi~------~~ng----~~~~~~--~~~ 242 (523)
+-+-||... ...|++.|+.+.++.|++ +-++.|+.... +..++. ...| ++.+.. ...
T Consensus 165 Is~qNEP~~--------~~~fik~L~p~L~~~gl~~~kI~~~D~n~~~~~~~il~d~~a~~~v~gia~HY~g~~~~~~~~ 236 (656)
T 3zr5_A 165 IGIWNERPF--------DANYIKELRKMLDYQGLQRVRIIASDNLWEPISSSLLLDQELWKVVDVIGAHYPGTYTVWNAK 236 (656)
T ss_dssp ECSCTTSCC--------CHHHHHHHHHHHHHTTCTTCEEEEEEECSTTHHHHHHHCHHHHHHCCEEEEESCTTCCCHHHH
T ss_pred EeeccCCCc--------cccHHHHHHHHHHHcCCCccEEEEcCCCchHHHHHHhcCHhHHhhccEEEEECCCCCcchHhh
Confidence 888899853 357999999999999997 88888875321 111111 1111 111111 123
Q ss_pred CCCCCceEeeeccccccccCCCCCCCCHHHHHHHHHHH-HhcCCee-eeeee---eccCCCCCCCCCCCcccccccCCCC
Q 009890 243 SNNKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARF-FQRGGTF-QNYYM---YHGGTNFDRTSGGPFISTSYDYDAP 317 (523)
Q Consensus 243 ~~~~P~~~tE~~~Gwf~~wG~~~~~r~~~d~~~~~~~~-~~~g~s~-~nyYM---~hGGTNfG~~~G~~~~~TSYDy~Ap 317 (523)
.|+++.+.||...+|-+ |++ +...+..+.+- +..+.+. +--.+ ..||.|||.. ++
T Consensus 237 ~p~k~lw~TE~~~~~~~-~~g------~g~wa~~i~~~~~~~~~~a~i~Wnl~ld~~ggp~~~~~-------------gl 296 (656)
T 3zr5_A 237 MSGKKLWSSEDFSTINS-NVG------AGCWSRILNQNYINGNMTSTIAWNLVASYYEELPYGRS-------------GL 296 (656)
T ss_dssp HHTCEEEEEEEECSCTT-HHH------HHHHHHHHHHHHHHHCCCEEEEECSEECSCTTSTTTTC-------------SS
T ss_pred CCCCceEEEccccCCCC-CCC------ccHHHHHHHHHHHhCCceEEEEEeeeeCCCCCCCCCCc-------------eE
Confidence 47899999998765422 211 11222222222 2223221 11111 3567777533 22
Q ss_pred CCc----CCC-CCChhHHHHHHHHHHHHHhhhcccCCCCCCCCCCCCceEEEEEcCCCceEEEEEe
Q 009890 318 LDE----YGL-IRQPKWGHLKDLHKAIKLCEAALVATDPTYPSLGPNLEATVYKTGSGLCSAFLAN 378 (523)
Q Consensus 318 i~E----~G~-~~~pKy~~lk~lh~~i~~~~~~L~~~~~~~~~lg~~~~~~v~~~~~~~~~~Fl~N 378 (523)
|.. .|. ..+|.|..|....+||+.-...+... .....+.+.-.|.+.+|.-++-+.|
T Consensus 297 I~~~~~~~g~~~~~~~yY~~ghfSkFIrPGa~RI~~s----~~~~~~~~~vAf~npdG~~vvVv~t 358 (656)
T 3zr5_A 297 MTAQEPWSGHYVVASPIWVSAHTTQFTQPGWYYLKTV----GHLEKGGSYVALTDGLGNLTIIIET 358 (656)
T ss_dssp EECCCTTTCCCBCCHHHHHHHHHHTTCCTTCEEESCC----EECTTSCEEEEEECSSSCEEEEEEC
T ss_pred EEeccCCCCeEEECHHHhHhhhhhcccCCCCEEEecc----cccCCCeeEEEEECCCCCEEEEEEe
Confidence 222 231 23789999999999988543333311 0111234455566665555554543
|
| >2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A* | Back alignment and structure |
|---|
Probab=96.47 E-value=1.2 Score=47.41 Aligned_cols=115 Identities=12% Similarity=0.080 Sum_probs=74.2
Q ss_pred CCCCHHHHHHHHHHHHhcCCee-eeeeeeccCCCCCCCCCCCcccccccCCCCCCcCCCCCChhHHHHHHHHHHHHHhhh
Q 009890 266 PYRPVEDLAFAVARFFQRGGTF-QNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEA 344 (523)
Q Consensus 266 ~~r~~~d~~~~~~~~~~~g~s~-~nyYM~hGGTNfG~~~G~~~~~TSYDy~Api~E~G~~~~pKy~~lk~lh~~i~~~~~ 344 (523)
..++++++...+...+++||++ +|. |.+.+|.+.+.....|+++...|+..+.
T Consensus 292 ~~ks~~~Li~~lv~~VskgGnlLLNv--------------------------gP~~dG~I~~~~~~~L~~iG~wl~~ngE 345 (450)
T 2wvv_A 292 YVKTPIEVIDRIVHAVSMGGNMVVNF--------------------------GPQADGDFRPEEKAMATAIGKWMNRYGK 345 (450)
T ss_dssp CBCCHHHHHHHHHHHHHTTCEEEEEE--------------------------CCCTTSSCCHHHHHHHHHHHHHHHHHGG
T ss_pred ccCCHHHHHHHHHHHhcCCceEEEee--------------------------CCCCCCCcCHHHHHHHHHHHHHHHhhhh
Confidence 5578999999999999999884 443 2446788888889999999999999999
Q ss_pred cccCCCCCCCCCCCCceEEEEEc-CCCceEEEEEeCCCCeeEEEEECCeEEEecCeeEEEcCCCCeEEe
Q 009890 345 ALVATDPTYPSLGPNLEATVYKT-GSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVF 412 (523)
Q Consensus 345 ~L~~~~~~~~~lg~~~~~~v~~~-~~~~~~~Fl~N~~~~~~~~V~f~~~~~~lp~~svsIlp~~~~v~~ 412 (523)
++..+.|.... .. .-.+|.. +++.-.+++.+.-....++|...+. -...+|++|.+...+.|
T Consensus 346 aIYgt~~~~~~--~~-~~~~~T~~k~~~lYa~~~~~P~~~~~~l~~~~~---~~v~~v~lLg~~~~l~~ 408 (450)
T 2wvv_A 346 AVYACDYAGFE--KQ-DWGYYTRGKNDEVYMVVFNQPYSERLIVKTPKG---ITVEKATLLTTGEDITV 408 (450)
T ss_dssp GTTTCBCCCCC--CC-TTEEEEECTTSCEEEEESSCCTTSEEEEECCTT---EEEEEEEETTTCCBCCE
T ss_pred heecccCcccc--CC-CcEEEEccCCCEEEEEEcccCCCCeEEEEecCC---CCceEEEEECCCCceeE
Confidence 99877654322 11 1134544 4334445555433333344555443 12345777766655555
|
| >4a3y_A Raucaffricine-O-beta-D-glucosidase; hydrolase, alkaloid; 2.15A {Rauvolfia serpentina} PDB: 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
Probab=96.03 E-value=0.0015 Score=71.44 Aligned_cols=95 Identities=14% Similarity=0.124 Sum_probs=75.2
Q ss_pred chHHHHHHHHhCCCCEEEEccccCcCCCC---CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcccc
Q 009890 57 MWPDLIQKSKDGGLDVIETYVFWNLHEPV---RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH 133 (523)
Q Consensus 57 ~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~---~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~ 133 (523)
.|+++|+.||++|+|+-|+-|-|.-..|. +|+.|-.|-.--+++|+.|.++||.-++-. ..=.+|.||.
T Consensus 77 ry~EDi~Lm~elG~~~yRfSIsWsRI~P~G~~~g~~N~~Gl~fY~~lid~l~~~GIeP~VTL--------~H~dlP~~L~ 148 (540)
T 4a3y_A 77 LYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTL--------FHWDVPQALE 148 (540)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCHHHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHH
T ss_pred hhHHHHHHHHHcCCCEEEeeccHhhcccCCCCCCCCCHHHHHHHHHHHHHHHHcCCccceec--------cCCCCcHHHH
Confidence 48999999999999999999999999997 799999999899999999999999977765 3446899997
Q ss_pred CC-CCeeeecCChhHHHHHHHHHHHHHHHHH
Q 009890 134 FI-PGIQFRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 134 ~~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
+. -|- .|+...++..+|.+.+++.++
T Consensus 149 ~~yGGW----~nr~~v~~F~~Ya~~~f~~fg 175 (540)
T 4a3y_A 149 DEYGGF----LSPRIVDDFCEYAELCFWEFG 175 (540)
T ss_dssp HHHCGG----GSTHHHHHHHHHHHHHHHHHT
T ss_pred hccCCc----CChHHHHHHHHHHHHHHHHhc
Confidence 63 443 234444555555555555555
|
| >4ha4_A Beta-galactosidase; TIM barrel, beta-glycosidase, hydrolase; HET: GOL PG6; 1.37A {Acidilobus saccharovorans} PDB: 4ha3_A* 1uws_A* 1uwr_A* 1uwq_A* 1uwt_A* 1uwu_A* 2ceq_A* 2cer_A* 4eam_A 4ean_A | Back alignment and structure |
|---|
Probab=94.74 E-value=0.051 Score=58.54 Aligned_cols=95 Identities=18% Similarity=0.209 Sum_probs=70.6
Q ss_pred chHHHHHHHHhCCCCEEEEccccCcCCCCC-----------------------------ceeeccCcchHHHHHHHHHHc
Q 009890 57 MWPDLIQKSKDGGLDVIETYVFWNLHEPVR-----------------------------NQYNFEGRYDLVKFVKLVAEA 107 (523)
Q Consensus 57 ~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~-----------------------------G~ydF~G~~dL~~fl~la~~~ 107 (523)
.|+++++.||++|+|+-|+-+-|.-..|.. |+.|=.|-.--+++|+.|.++
T Consensus 62 ~y~eDi~l~~~mG~~~yRfSIsWsRI~P~G~~~~~~~~e~~gd~~~~~~~~~g~~~~~~~~~N~~Gl~fY~~lid~Ll~~ 141 (489)
T 4ha4_A 62 NYRKFHDAAQAMGLTAARIGVEWSRIFPRPTFDVKVDAEVKGDDVLSVYVSEGALEQLDKMANRDAINHYREMFSDLRSR 141 (489)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCHHHHCSSCCTTSCCEEEEETTEEEEEECCHHHHHHHHHHSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEeeccHHhcCcCCCcccccccccccccccccccccccccccccCCCHHHHHHHHHHHHHHHHc
Confidence 479999999999999999999999999963 344555666779999999999
Q ss_pred CCEEEEecCceeccccCCCCCCccccCC-----------CCeeeecCChhHHHHHHHHHHHHHHHHH
Q 009890 108 GLYAHLRIGPYVCAEWNFGGFPLWLHFI-----------PGIQFRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 108 GL~Vilr~GPyi~aEw~~GG~P~WL~~~-----------p~i~~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
||.-++-. -.=-+|.||.+. .|- .|+...++-.+|.+.+++.+.
T Consensus 142 GIeP~VTL--------~H~DlP~~L~d~~~~~~g~~~~~GGW----~n~~~v~~F~~YA~~~f~~fg 196 (489)
T 4ha4_A 142 GITFILNL--------YHWPLPLWLHDPIAIRRGNLSAPSGW----LDVRTVIEFAKFSAYVAWKLD 196 (489)
T ss_dssp TCEEEEES--------CSSCCBTTTBCHHHHHTTCTTSCBGG----GSHHHHHHHHHHHHHHHHHHG
T ss_pred CCeeeEee--------cCCCchHHHhhhhcccccccccCCCC----CCHHHHHHHHHHHHHHHHHhC
Confidence 99988766 345689999641 121 245545555556566666555
|
| >1uwi_A Beta-galactosidase; hydrolase, beta-glycosidase, glycosidase; 2.55A {Sulfolobus solfataricus} SCOP: c.1.8.4 PDB: 1gow_A | Back alignment and structure |
|---|
Probab=94.69 E-value=0.062 Score=57.88 Aligned_cols=95 Identities=20% Similarity=0.241 Sum_probs=70.5
Q ss_pred chHHHHHHHHhCCCCEEEEccccCcCCCCC----------------------------ceeeccCcchHHHHHHHHHHcC
Q 009890 57 MWPDLIQKSKDGGLDVIETYVFWNLHEPVR----------------------------NQYNFEGRYDLVKFVKLVAEAG 108 (523)
Q Consensus 57 ~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~----------------------------G~ydF~G~~dL~~fl~la~~~G 108 (523)
.|+++++.||++|+|+-|+-|-|.-..|.. |+.|=.|-.--+++|+.+.++|
T Consensus 62 ~y~eDi~l~~elG~~~yRfSIsWsRI~P~G~~~~~~~~~~~~~~~~~e~~e~~~~~~~~~~N~~Gl~fY~~lid~Ll~~G 141 (489)
T 1uwi_A 62 NYKTFHNNAQKMGLKIARLNSEWSRQFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIFKDLKSRG 141 (489)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCHHHHCCSCCCCCTTCCTTCSCCCCCCCCHHHHHHHHTTSCHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHcCCCEEEEeCcHHHCCCCCCccccccccccccccccccccccccccccCCCHHHHHHHHHHHHHHHHcC
Confidence 579999999999999999999999999863 4455556666789999999999
Q ss_pred CEEEEecCceeccccCCCCCCccccCC-----------CCeeeecCChhHHHHHHHHHHHHHHHHH
Q 009890 109 LYAHLRIGPYVCAEWNFGGFPLWLHFI-----------PGIQFRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 109 L~Vilr~GPyi~aEw~~GG~P~WL~~~-----------p~i~~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
|.-++-. -.=.+|.||.+. -|- .|+...++-.+|.+.+++.+.
T Consensus 142 IeP~VTL--------~H~DlP~~L~d~y~~~~g~~~~~GGW----~n~~~v~~F~~YA~~~f~~fg 195 (489)
T 1uwi_A 142 LYFIQNM--------YHWPLPLWLHDPIRVRRGDFTGPSGW----LSTRTVYEFARFSAYTAWKFD 195 (489)
T ss_dssp CEEEEES--------CCSCCBGGGBCHHHHHTTCCSSCBGG----GSHHHHHHHHHHHHHHHHHHT
T ss_pred CcceEEe--------ecCCccHHHHHhhhhcccccccCCCc----CCHHHHHHHHHHHHHHHHHhC
Confidence 9988766 345689999751 121 245555555555555655555
|
| >3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0 | Back alignment and structure |
|---|
Probab=94.07 E-value=0.49 Score=45.53 Aligned_cols=123 Identities=11% Similarity=0.076 Sum_probs=72.2
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFI 135 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~ 135 (523)
--+++.|++++++|++.|+...++ + .++.++.+++++.||.+..--.|+. . |....
T Consensus 23 ~~~~~~l~~~~~~G~~~vEl~~~~----------~----~~~~~~~~~l~~~gl~~~~~~~~~~--~--------~~~~~ 78 (269)
T 3ngf_A 23 VPFLERFRLAAEAGFGGVEFLFPY----------D----FDADVIARELKQHNLTQVLFNMPPG--D--------WAAGE 78 (269)
T ss_dssp SCHHHHHHHHHHTTCSEEECSCCT----------T----SCHHHHHHHHHHTTCEEEEEECCCS--C--------TTTTC
T ss_pred CCHHHHHHHHHHcCCCEEEecCCc----------c----CCHHHHHHHHHHcCCcEEEEecCCC--c--------cccCC
Confidence 347899999999999999996532 1 2689999999999999874322321 2 22111
Q ss_pred CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccc--cccCcccHHHHHHHHHHHHhcCCCc
Q 009890 136 PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNID--SAYGAAGKSYIKWAAGMALSLDTGV 213 (523)
Q Consensus 136 p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~--~~~g~~~~~y~~~l~~~~~~~g~~v 213 (523)
.++ +.||.-++...+.+++.++..+ .| |.+.|.+... -..... ..+ ..-.+.++.+.+.|++.|+.+
T Consensus 79 ~~~---~~~~~~r~~~~~~~~~~i~~A~--~l----Ga~~v~~~~g-~~~~~~~~~~~-~~~~~~l~~l~~~a~~~Gv~l 147 (269)
T 3ngf_A 79 RGM---AAISGREQEFRDNVDIALHYAL--AL----DCRTLHAMSG-ITEGLDRKACE-ETFIENFRYAADKLAPHGITV 147 (269)
T ss_dssp CBC---TTCTTCHHHHHHHHHHHHHHHH--HT----TCCEEECCBC-BCTTSCHHHHH-HHHHHHHHHHHHHHGGGTCEE
T ss_pred CCc---CCCccHHHHHHHHHHHHHHHHH--Hc----CCCEEEEccC-CCCCCCHHHHH-HHHHHHHHHHHHHHHHcCCEE
Confidence 111 2345555666666777777777 23 4566655432 100000 000 112345666777777777764
|
| >3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=91.93 E-value=1.4 Score=49.59 Aligned_cols=166 Identities=16% Similarity=0.185 Sum_probs=85.7
Q ss_pred EeeCCCCCc-cchHH---HH-HHHHhCCCCEEEE-ccccCcC----CCCCcee-----eccCcchHHHHHHHHHHcCCEE
Q 009890 47 SIHYPRSTP-EMWPD---LI-QKSKDGGLDVIET-YVFWNLH----EPVRNQY-----NFEGRYDLVKFVKLVAEAGLYA 111 (523)
Q Consensus 47 ~iHy~R~~~-~~W~d---~l-~k~Ka~GlN~V~t-YvfWn~H----Ep~~G~y-----dF~G~~dL~~fl~la~~~GL~V 111 (523)
|+|...+.+ ..|++ .| ..+|++|+|+|.+ .++..-. --.+..| .|....++.+|++.|+++||.|
T Consensus 250 E~h~~s~~~~G~~~~l~~~l~~yLk~lG~t~I~L~Pi~e~~~~~~wGY~~~~y~a~~~~yGt~~dfk~lV~~~H~~GI~V 329 (722)
T 3k1d_A 250 EVHLGSWRPGLSYRQLARELTDYIVDQGFTHVELLPVAEHPFAGSWGYQVTSYYAPTSRFGTPDDFRALVDALHQAGIGV 329 (722)
T ss_dssp EECTTTSSTTCCHHHHHHHHHHHHHHHTCSEEEESCCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEE
T ss_pred EEehhhccCCCCHHHHHHHHHHHHHHcCCCeEEECCcccCCCCCCCCCCcccCcCccccCCCHHHHHHHHHHHHHcCCEE
Confidence 566544332 23443 34 6789999999996 4543211 1112122 1444579999999999999999
Q ss_pred EEecCceecc--cc---CCCCCCccccCCCC---------eeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceE-
Q 009890 112 HLRIGPYVCA--EW---NFGGFPLWLHFIPG---------IQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPII- 176 (523)
Q Consensus 112 ilr~GPyi~a--Ew---~~GG~P~WL~~~p~---------i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII- 176 (523)
||-.=|--++ +| .+.|-|.+-...|. ..+-..+|.-++++..++...++.+.=.++-..--..|+
T Consensus 330 ilD~V~NH~~~~~~~~~~fdg~~~y~~~d~~~~~~~~Wg~~~ln~~~p~Vr~~l~~~~~~Wl~~~gvDGfR~Dav~~mly 409 (722)
T 3k1d_A 330 IVDWVPAHFPKDAWALGRFDGTPLYEHSDPKRGEQLDWGTYVFDFGRPEVRNFLVANALYWLQEFHIDGLRVDAVASMLY 409 (722)
T ss_dssp EEEECTTCCCCCTTTTTTTTSSCCSBCCCCCSSSTTCCCCCCBCTTSHHHHHHHHHHHHHHHHHSCCCEEEECCTHHHHB
T ss_pred EEEEEeeccCCccchhhcCCCCcccccCCcccCccCCCCCeeecCCCHHHHHHHHHHHHHHHHHhCCCEEEEcchhhhhh
Confidence 9986433222 22 12222222111110 124455666666655555555443211121111000110
Q ss_pred --------eccccccccccccccCcccHHHHHHHHHHHHhcCCCcceE
Q 009890 177 --------LSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWV 216 (523)
Q Consensus 177 --------~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~ 216 (523)
-| +.|+||.... ....+|++++.+.+++..-++-++
T Consensus 410 ~d~~r~~g~w-~~n~~gg~~n---~~~~~fl~~l~~~v~~~~P~~~~i 453 (722)
T 3k1d_A 410 LDYSRPEGGW-TPNVHGGREN---LEAVQFLQEMNATAHKVAPGIVTI 453 (722)
T ss_dssp CCCCCCSSCC-SCCCSSCSBC---HHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred cccccccccc-ccccCCCccC---hHHHHHHHHHHHHHHHhCCCeEEE
Confidence 01 2466654211 135689999999988876665443
|
| >2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* | Back alignment and structure |
|---|
Probab=90.70 E-value=1.2 Score=50.24 Aligned_cols=83 Identities=19% Similarity=0.284 Sum_probs=56.0
Q ss_pred ccchHHHHHHHHhCCCCEEEEccccCcCCC----CCceeeccCcc--h-HHHHHHHHHHcCCEEEEecCceeccccC--C
Q 009890 55 PEMWPDLIQKSKDGGLDVIETYVFWNLHEP----VRNQYNFEGRY--D-LVKFVKLVAEAGLYAHLRIGPYVCAEWN--F 125 (523)
Q Consensus 55 ~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp----~~G~ydF~G~~--d-L~~fl~la~~~GL~Vilr~GPyi~aEw~--~ 125 (523)
.+.-.+.++.||+.|+++|-+--.|..... .-|.|.+.-.+ + +..+++.+++.||++.+.+-|+.++.-. +
T Consensus 345 e~~i~~~ad~~~~~G~~~~viDDgW~~~r~~~~~~~Gdw~~d~~kFP~Glk~lvd~ih~~Glk~GlW~~P~~v~~~S~l~ 424 (720)
T 2yfo_A 345 GDTIVDLAKEAASLGIDMVVMDDGWFGKRNDDNSSLGDWQVNETKLGGSLAELITRVHEQGMKFGIWIEPEMINEDSDLY 424 (720)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECSSSBTTCSSTTSCTTCCSBCHHHHTSCHHHHHHHHHHTTCEEEEEECTTEECSSSHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEECcccccCCCcccccCCCCeeChhhcCccHHHHHHHHHHCCCEEEEEecccccCCCCHHH
Confidence 333356788999999999888777864432 23555543211 3 8999999999999999999997543110 1
Q ss_pred CCCCccccCCCC
Q 009890 126 GGFPLWLHFIPG 137 (523)
Q Consensus 126 GG~P~WL~~~p~ 137 (523)
.-.|.|+...++
T Consensus 425 ~~hpdw~~~~~~ 436 (720)
T 2yfo_A 425 RAHPDWAIRIQG 436 (720)
T ss_dssp HHCGGGBCCCTT
T ss_pred HhCcceEEECCC
Confidence 235778776554
|
| >4acy_A Endo-alpha-mannosidase; hydrolase, endomannosidase, glycoside hydrolase, CAZY, enzyme-carbohydrate interaction, mannose; HET: MSE; 1.69A {Bacteroides thetaiotaomicron} PDB: 4acz_A 4ad0_A* 4acz_B | Back alignment and structure |
|---|
Probab=90.34 E-value=0.64 Score=48.51 Aligned_cols=91 Identities=18% Similarity=0.329 Sum_probs=62.2
Q ss_pred CccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcccc
Q 009890 54 TPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH 133 (523)
Q Consensus 54 ~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~ 133 (523)
.++.|+..++.||++||+++-.-.++. |.+. +.-|..+++.|++.|+.+...+-||
T Consensus 101 D~~v~~~hi~~ak~aGIDgfal~w~~~------~~~~---d~~l~~~~~aA~~~g~k~~f~~~~y--------------- 156 (382)
T 4acy_A 101 DPEIIRKHIRMHIKANVGVLSVTWWGE------SDYG---NQSVSLLLDEAAKVGAKVCFHIEPF--------------- 156 (382)
T ss_dssp CHHHHHHHHHHHHHHTEEEEEEEECGG------GGTT---CHHHHHHHHHHHHHTCEEEEEECCC---------------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEecCC------CCch---HHHHHHHHHHHHHcCCEEEEEeecC---------------
Confidence 688899999999999999999887763 2221 2468999999999999987544221
Q ss_pred CCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccc-cCCceEec
Q 009890 134 FIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYAS-QGGPIILS 178 (523)
Q Consensus 134 ~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~-~gGpII~~ 178 (523)
.+ | ++ +.+++=+..|++....++-+++ +|.||+.+
T Consensus 157 --~~---~--~~---~~~~~dv~~li~~Y~~~paY~r~~GKPvV~i 192 (382)
T 4acy_A 157 --NG---R--SP---QTVRENIQYIVDTYGDHPAFYRTHGKPLFFI 192 (382)
T ss_dssp --TT---C--CH---HHHHHHHHHHHHHHTTSTTBCCBTTBCEEEE
T ss_pred --CC---C--Ch---HHHHHHHHHHHHHhcCCCceEEECCeEEEEE
Confidence 01 1 11 2334445556666676666554 66788865
|
| >3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} | Back alignment and structure |
|---|
Probab=89.82 E-value=4.7 Score=45.52 Aligned_cols=87 Identities=20% Similarity=0.322 Sum_probs=62.0
Q ss_pred CCCCCccchHHHHHHHHhCCCCEEEEccccCcCC----CCCceeeccCcc--h-HHHHHHHHHHcCCEEEEecCce-ecc
Q 009890 50 YPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHE----PVRNQYNFEGRY--D-LVKFVKLVAEAGLYAHLRIGPY-VCA 121 (523)
Q Consensus 50 y~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HE----p~~G~ydF~G~~--d-L~~fl~la~~~GL~Vilr~GPy-i~a 121 (523)
|+..+.+.-.+.++.||+.|++.+-+--.|.... ..-|.|.+.-.+ + |..+++.+++.||.+.+++-|+ |..
T Consensus 341 ~~d~tee~il~~ad~~~~~G~e~fviDDGW~~~r~~d~~~~Gdw~~d~~kFP~Gl~~lv~~ih~~Glk~glW~~Pe~v~~ 420 (745)
T 3mi6_A 341 YFDFNEAKLMTIVNQAKRLGIEMFVLDDGWFGHRDDDTTSLGDWFVDQRKFPDGIEHFSQAVHQQGMKFGLWFEPEMVSV 420 (745)
T ss_dssp TTCCCHHHHHHHHHHHHHHTCCEEEECTTCBTTCSSTTSCTTCCSBCTTTCTTHHHHHHHHHHHTTCEEEEEECTTEECS
T ss_pred CcCCCHHHHHHHHHHHHHcCCcEEEECcccccCCCCCcccCCCceeChhhcCccHHHHHHHHHHCCCEEEEEEcccccCC
Confidence 4556667778889999999999888888897543 234666664322 3 8999999999999999999994 432
Q ss_pred ccC-CCCCCccccCCC
Q 009890 122 EWN-FGGFPLWLHFIP 136 (523)
Q Consensus 122 Ew~-~GG~P~WL~~~p 136 (523)
+.. +--.|.|+...+
T Consensus 421 dS~l~~~hPdw~l~~~ 436 (745)
T 3mi6_A 421 DSDLYQQHPDWLIHAP 436 (745)
T ss_dssp SSSHHHHCGGGBCCCT
T ss_pred CCHHHHhCcceEEEcC
Confidence 211 112478887655
|
| >4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A* | Back alignment and structure |
|---|
Probab=89.80 E-value=0.69 Score=48.15 Aligned_cols=93 Identities=9% Similarity=0.161 Sum_probs=60.9
Q ss_pred CCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccc
Q 009890 53 STPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWL 132 (523)
Q Consensus 53 ~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL 132 (523)
..++.|+..++.||++||+.+-.+.+|.. . .....-|..+++.|++.|+.+....-| |.
T Consensus 101 ~d~~v~~~h~~~Ak~aGIDgf~l~w~~~~------~--~~d~~~l~~~l~aA~~~~~k~~f~~~~-----~~-------- 159 (380)
T 4ad1_A 101 SDPNILTKHMDMFVMARTGVLALTWWNEQ------D--ETEAKRIGLILDAADKKKIKVCFHLEP-----YP-------- 159 (380)
T ss_dssp TCHHHHHHHHHHHHHHTEEEEEEEECCCC------S--HHHHHHHHHHHHHHHHTTCEEEEEECC-----CT--------
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEecCCC------C--cccHHHHHHHHHHHHHcCCeEEEEECC-----CC--------
Confidence 37889999999999999999999987732 1 110135788999999999998744322 11
Q ss_pred cCCCCeeeecCChhHHHHHHHHHHHHHHHHHhccccc-ccCCceEec
Q 009890 133 HFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYA-SQGGPIILS 178 (523)
Q Consensus 133 ~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~-~~gGpII~~ 178 (523)
+ | + . +.+++=+..|++...+++-++ -+|.||+.+
T Consensus 160 ----~---~-~-~---~~~~~di~~li~~Y~~~pay~~~~gkPvv~i 194 (380)
T 4ad1_A 160 ----S---R-N-V---QNLRENIVKLITRYGNHPAFYRKDGKPLFFI 194 (380)
T ss_dssp ----T---C-C-H---HHHHHHHHHHHHHHTTSTTBCCBTTBCEEEE
T ss_pred ----C---C-C-h---HHHHHHHHHHHHHhcCCCceEEECCeEEEEE
Confidence 1 1 1 1 223333455555555555554 467798876
|
| >3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A* | Back alignment and structure |
|---|
Probab=89.21 E-value=3.9 Score=39.28 Aligned_cols=126 Identities=11% Similarity=0.139 Sum_probs=74.9
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFI 135 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~ 135 (523)
.-+++.|++++++|++.|+..... + + ++ ...++.++.++++++||.+..-.+|..
T Consensus 17 ~~~~~~l~~~~~~G~~~vEl~~~~-~----~---~~-~~~~~~~~~~~l~~~gl~i~~~~~~~~---------------- 71 (294)
T 3vni_A 17 ADYKYYIEKVAKLGFDILEIAASP-L----P---FY-SDIQINELKACAHGNGITLTVGHGPSA---------------- 71 (294)
T ss_dssp CCHHHHHHHHHHHTCSEEEEESTT-G----G---GC-CHHHHHHHHHHHHHTTCEEEEEECCCG----------------
T ss_pred cCHHHHHHHHHHcCCCEEEecCcc-c----C---Cc-CHHHHHHHHHHHHHcCCeEEEeecCCC----------------
Confidence 358999999999999999997531 1 1 12 234789999999999999876443311
Q ss_pred CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccc-ccc--cccC---cccHHHHHHHHHHHHhc
Q 009890 136 PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG-NID--SAYG---AAGKSYIKWAAGMALSL 209 (523)
Q Consensus 136 p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg-~~~--~~~g---~~~~~y~~~l~~~~~~~ 209 (523)
.+.+-+.|+..++...+.+++.++..+. | |.+.|.+-+---++ .+. .... +.-.+.++.+.+.+++.
T Consensus 72 -~~~l~~~d~~~r~~~~~~~~~~i~~a~~--l----G~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~ 144 (294)
T 3vni_A 72 -EQNLSSPDPDIRKNAKAFYTDLLKRLYK--L----DVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEAC 144 (294)
T ss_dssp -GGCTTCSCHHHHHHHHHHHHHHHHHHHH--H----TCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -CcCCCCCCHHHHHHHHHHHHHHHHHHHH--h----CCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 0113345677677777777777777773 2 44555321110000 000 0000 11234566677777777
Q ss_pred CCCc
Q 009890 210 DTGV 213 (523)
Q Consensus 210 g~~v 213 (523)
|+.+
T Consensus 145 Gv~l 148 (294)
T 3vni_A 145 GVDF 148 (294)
T ss_dssp TCEE
T ss_pred CCEE
Confidence 8764
|
| >1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* | Back alignment and structure |
|---|
Probab=89.05 E-value=3.2 Score=45.53 Aligned_cols=53 Identities=21% Similarity=0.121 Sum_probs=36.7
Q ss_pred HHHHhCCCCEEEE-ccccCc----CCCCCcee-----eccCcchHHHHHHHHHHcCCEEEEec
Q 009890 63 QKSKDGGLDVIET-YVFWNL----HEPVRNQY-----NFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 63 ~k~Ka~GlN~V~t-YvfWn~----HEp~~G~y-----dF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
.-+|++|+|+|.. .|+-.- |--.+-.| .|....+|.++++.|+++||.|||-.
T Consensus 163 ~yl~~lGv~~i~l~Pi~~~~~~~~~GY~~~~y~~~~~~~Gt~~~~~~lv~~~H~~Gi~VilD~ 225 (617)
T 1m7x_A 163 PYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDW 225 (617)
T ss_dssp HHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHcCCCEEEecccccCCCCCCCCcccccCCccCccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 6679999999997 454221 11111111 13456799999999999999999884
|
| >1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A | Back alignment and structure |
|---|
Probab=89.02 E-value=1.4 Score=45.67 Aligned_cols=105 Identities=14% Similarity=0.166 Sum_probs=60.3
Q ss_pred cchHHHHHHHHhCCCCEEEEc-cccCc-------------CCCCCcee-----eccCcchHHHHHHHHHHcCCEEEEecC
Q 009890 56 EMWPDLIQKSKDGGLDVIETY-VFWNL-------------HEPVRNQY-----NFEGRYDLVKFVKLVAEAGLYAHLRIG 116 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tY-vfWn~-------------HEp~~G~y-----dF~G~~dL~~fl~la~~~GL~Vilr~G 116 (523)
.-..+.|..+|++|+++|.+- ++=.. |--.+..| .|....+|.++++.|+++||.|||-.=
T Consensus 17 ~~i~~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~~~~~gY~~~~y~~~~~~~G~~~d~~~lv~~~h~~Gi~VilD~V 96 (422)
T 1ua7_A 17 NTLKHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDAV 96 (422)
T ss_dssp HHHHHTHHHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEeCCccccccCCcCcCccCCccccccceeeeccCCCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 334566788999999999963 32110 00111122 145567999999999999999998742
Q ss_pred ceeccc---cC---CCCCCccccCC-----------------CC-eeeecCChhHHHHHHHHHHHHHH
Q 009890 117 PYVCAE---WN---FGGFPLWLHFI-----------------PG-IQFRTDNEPFKAEMQRFTAKIVD 160 (523)
Q Consensus 117 Pyi~aE---w~---~GG~P~WL~~~-----------------p~-i~~Rt~d~~fl~~~~~~~~~i~~ 160 (523)
|-=+++ |- .-+.|.|.... .+ ..+.+.+|.-++++..+++..++
T Consensus 97 ~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~ 164 (422)
T 1ua7_A 97 INHTTFDYAAISNEVKSIPNWTHGNTQIKNWSDRWDVTQNSLLGLYDWNTQNTQVQSYLKRFLERALN 164 (422)
T ss_dssp CSBCCSCTTTSCHHHHTSTTCEEECCBCCCTTCHHHHHHSBBTTBCEECTTSHHHHHHHHHHHHHHHH
T ss_pred cCcccCCccccCccccCCcccccCCCCCCCcCchhcccccccCCCCccccCCHHHHHHHHHHHHHHHH
Confidence 211111 10 01234444311 01 13666777777777776666654
|
| >3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=88.77 E-value=3.8 Score=40.39 Aligned_cols=54 Identities=17% Similarity=0.279 Sum_probs=37.4
Q ss_pred chHHHHHHHHhCCCCEEEEccccC----cCCCCCceeeccCcchHHHHHHHHHHcCCEEEE
Q 009890 57 MWPDLIQKSKDGGLDVIETYVFWN----LHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHL 113 (523)
Q Consensus 57 ~W~d~l~k~Ka~GlN~V~tYvfWn----~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vil 113 (523)
-+++.|++++++|++.|++..... ...-.|...+. .++.++-++++++||.++.
T Consensus 37 ~l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~---~~~~~l~~~l~~~GL~i~~ 94 (305)
T 3obe_A 37 DMPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTF---IASKDYKKMVDDAGLRISS 94 (305)
T ss_dssp THHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCC---BCHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEecccccccccccCcCcccccc---cCHHHHHHHHHHCCCeEEE
Confidence 588999999999999999975310 00111212222 2789999999999999863
|
| >3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A* | Back alignment and structure |
|---|
Probab=88.58 E-value=20 Score=39.73 Aligned_cols=55 Identities=18% Similarity=0.230 Sum_probs=45.8
Q ss_pred HHHHHHHHhCCCCEEEEc-cccCcCCCCCce------e-eccCc----chHHHHHHHHHHcCCEEEE
Q 009890 59 PDLIQKSKDGGLDVIETY-VFWNLHEPVRNQ------Y-NFEGR----YDLVKFVKLVAEAGLYAHL 113 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~tY-vfWn~HEp~~G~------y-dF~G~----~dL~~fl~la~~~GL~Vil 113 (523)
+..|++|+..-||.|+.| ..|.+|.|.|+. | |+.|+ .-+...|+.|++.||..+.
T Consensus 143 ~~~i~~L~~yHIN~~QFYDW~yrHh~P~~~~~~~~~~W~D~~~R~i~~~tVk~yI~~ah~~gm~aM~ 209 (643)
T 3vmn_A 143 YRELEQMKNMNINSYFFYDVYKSATNPFPNVPKFDQSWNWWSHSQVETDAVKALVNRVHQTGAVAML 209 (643)
T ss_dssp HHHHHHHHHTTCCEEEETTCCSBTTBCSCSSSEEECTTCTTTCCEEEHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhcCcCeEEeeeecccccCcCCCCCccccccccccCCEehHHHHHHHHHHHHHcCchhhh
Confidence 688999999999999999 889999998862 2 34444 2488999999999999773
|
| >3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503} | Back alignment and structure |
|---|
Probab=88.52 E-value=4.4 Score=38.93 Aligned_cols=121 Identities=11% Similarity=0.006 Sum_probs=75.1
Q ss_pred CccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEE-EecCceeccccCCCCCCccc
Q 009890 54 TPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAH-LRIGPYVCAEWNFGGFPLWL 132 (523)
Q Consensus 54 ~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vi-lr~GPyi~aEw~~GG~P~WL 132 (523)
+..-+++.|++++++|++.|+..... + ..++.++.++++++||.+. +.++ ++.|+
T Consensus 36 ~~~~~~~~l~~~~~~G~~~vEl~~~~---------~----~~~~~~~~~~l~~~gl~v~~~~~~-----------~~~~l 91 (287)
T 3kws_A 36 PGESLNEKLDFMEKLGVVGFEPGGGG---------L----AGRVNEIKQALNGRNIKVSAICAG-----------FKGFI 91 (287)
T ss_dssp CCSSHHHHHHHHHHTTCCEEECBSTT---------C----GGGHHHHHHHHTTSSCEECEEECC-----------CCSCT
T ss_pred CCCCHHHHHHHHHHcCCCEEEecCCc---------h----HHHHHHHHHHHHHcCCeEEEEecC-----------CCCcC
Confidence 34578999999999999999987651 1 1378999999999999985 4331 23332
Q ss_pred cCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccc-cccc----ccccccCcccHHHHHHHHHHHH
Q 009890 133 HFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIE-NEYG----NIDSAYGAAGKSYIKWAAGMAL 207 (523)
Q Consensus 133 ~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIE-NEyg----~~~~~~g~~~~~y~~~l~~~~~ 207 (523)
-+.|+.-++...+.+++.++..+. | |.+.|.+... ..+. .....+ ..-.+.++.|.+.++
T Consensus 92 --------~~~d~~~r~~~~~~~~~~i~~a~~--l----Ga~~v~~~~g~~~~~~~~p~~~~~~-~~~~~~l~~l~~~a~ 156 (287)
T 3kws_A 92 --------LSTDPAIRKECMDTMKEIIAAAGE--L----GSTGVIIVPAFNGQVPALPHTMETR-DFLCEQFNEMGTFAA 156 (287)
T ss_dssp --------TBSSHHHHHHHHHHHHHHHHHHHH--T----TCSEEEECSCCTTCCSBCCSSHHHH-HHHHHHHHHHHHHHH
T ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHH--c----CCCEEEEecCcCCcCCCCCCHHHHH-HHHHHHHHHHHHHHH
Confidence 234566666666777777777773 2 4455544321 0010 000000 112455677777888
Q ss_pred hcCCCc
Q 009890 208 SLDTGV 213 (523)
Q Consensus 208 ~~g~~v 213 (523)
+.|+.+
T Consensus 157 ~~Gv~l 162 (287)
T 3kws_A 157 QHGTSV 162 (287)
T ss_dssp HTTCCE
T ss_pred HcCCEE
Confidence 888764
|
| >3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* | Back alignment and structure |
|---|
Probab=88.07 E-value=2.7 Score=47.04 Aligned_cols=134 Identities=17% Similarity=0.227 Sum_probs=74.0
Q ss_pred hHHHHHHHHhCCCCEEEEc-cccCc--CCC-----------CCce-e--------------eccCcchHHHHHHHHHHcC
Q 009890 58 WPDLIQKSKDGGLDVIETY-VFWNL--HEP-----------VRNQ-Y--------------NFEGRYDLVKFVKLVAEAG 108 (523)
Q Consensus 58 W~d~l~k~Ka~GlN~V~tY-vfWn~--HEp-----------~~G~-y--------------dF~G~~dL~~fl~la~~~G 108 (523)
..+.|.-+|++|+|+|.+- ++=+. |.- ..|. | .|....|+.++++.|++.|
T Consensus 255 i~~~LdyLk~LGvt~I~L~Pi~~~~~~~~~g~~n~~~~~~~d~GspY~i~d~~~~y~~idp~~Gt~edfk~LV~~aH~~G 334 (695)
T 3zss_A 255 AARRLPAIAAMGFDVVYLPPIHPIGTTHRKGRNNTLSATGDDVGVPWAIGSPEGGHDSIHPALGTLDDFDHFVTEAGKLG 334 (695)
T ss_dssp HGGGHHHHHHTTCCEEEECCCSCBCCTTCCCGGGCSSCCTTCCCCTTSBCBTTBCTTSCCTTTCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCEEEECCcccCCccccccccccccccccCCCCcccccCCCCCccccCcccCCHHHHHHHHHHHHHCC
Confidence 3456888999999999973 43111 100 0110 2 1344579999999999999
Q ss_pred CEEEEecCceecc-c--cCCCCCCccccCCCCe----------------eeecCC--hhHHHHHHHHHHHHHHHHHhccc
Q 009890 109 LYAHLRIGPYVCA-E--WNFGGFPLWLHFIPGI----------------QFRTDN--EPFKAEMQRFTAKIVDMMKQEKL 167 (523)
Q Consensus 109 L~Vilr~GPyi~a-E--w~~GG~P~WL~~~p~i----------------~~Rt~d--~~fl~~~~~~~~~i~~~ik~~~l 167 (523)
|.|||-.=+- |+ + |- -..|.|....++- .+-.++ |..++++..+++..++ .
T Consensus 335 I~VilD~V~N-hs~~~~~~-~~~~dwf~~~~dg~~~~~~~~~~~~~~~~dLn~~n~~p~V~~~l~~~l~~Wi~----~-- 406 (695)
T 3zss_A 335 LEIALDFALQ-CSPDHPWV-HKHPEWFHHRPDGTIAHAENPPKKYQDIYPIAFDADPDGLATETVRILRHWMD----H-- 406 (695)
T ss_dssp CEEEEEECCE-ECTTSTHH-HHCGGGSCCCTTSCCCCEEETTEEETTCEECCCSSCHHHHHHHHHHHHHHHHH----T--
T ss_pred CEEEEEeecc-CCccchhh-hcccceeeecCCCCcccCCCCCccccccccccccCCcHHHHHHHHHHHHHHHH----h--
Confidence 9999876332 21 0 10 0124454332110 123334 4444444444433332 2
Q ss_pred ccccCCceEeccccccccccccccCcccHHHHHHHHHHHHhcCCCc
Q 009890 168 YASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGV 213 (523)
Q Consensus 168 ~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~v 213 (523)
.|=++.+++=. .....|++++.+.+++..-++
T Consensus 407 ------GVDGfRlD~a~--------~~~~~f~~~~~~~v~~~~pd~ 438 (695)
T 3zss_A 407 ------GVRIFRVDNPH--------TKPVAFWERVIADINGTDPDV 438 (695)
T ss_dssp ------TCCEEEESSGG--------GSCHHHHHHHHHHHHHHCTTC
T ss_pred ------CCCEEEecCcc--------hhhHHHHHHHHHHHHhhCCCc
Confidence 24455655421 245789999999888766554
|
| >3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=88.03 E-value=3.1 Score=39.66 Aligned_cols=92 Identities=10% Similarity=0.078 Sum_probs=53.9
Q ss_pred eeCCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCC-EEEEecCceeccccCCC
Q 009890 48 IHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGL-YAHLRIGPYVCAEWNFG 126 (523)
Q Consensus 48 iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL-~Vilr~GPyi~aEw~~G 126 (523)
+|-.-.....+++.++.+++.|++.|+.+.. +-++-.. .+++ ..++.++.++++++|| .+.+. +||.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~G~~~vEl~~~-~~~~~~~--~~~~-~~~~~~~~~~~~~~gl~~~~~h-~~~~------- 73 (270)
T 3aam_A 6 FHLSIAGKKGVAGAVEEATALGLTAFQIFAK-SPRSWRP--RALS-PAEVEAFRALREASGGLPAVIH-ASYL------- 73 (270)
T ss_dssp EBCCCCSTTHHHHHHHHHHHHTCSCEEEESS-CTTCCSC--CCCC-HHHHHHHHHHHHHTTCCCEEEE-CCTT-------
T ss_pred eccccCCCccHHHHHHHHHHcCCCEEEEeCC-CCCcCcC--CCCC-HHHHHHHHHHHHHcCCceEEEe-cCcc-------
Confidence 4443333446899999999999999999331 1111011 1111 2378999999999999 44332 3431
Q ss_pred CCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHH
Q 009890 127 GFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 127 G~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
. .+-+ |+.-++...+.+++.++..+
T Consensus 74 ------~-----~l~s-~~~~r~~~~~~~~~~i~~a~ 98 (270)
T 3aam_A 74 ------V-----NLGA-EGELWEKSVASLADDLEKAA 98 (270)
T ss_dssp ------C-----CTTC-SSTHHHHHHHHHHHHHHHHH
T ss_pred ------c-----CCCC-CHHHHHHHHHHHHHHHHHHH
Confidence 0 1223 45555555556666666665
|
| >2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=87.35 E-value=0.9 Score=47.24 Aligned_cols=74 Identities=19% Similarity=0.136 Sum_probs=55.7
Q ss_pred EEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccc
Q 009890 43 LISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAE 122 (523)
Q Consensus 43 l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aE 122 (523)
.++=++++.....+.-.+.|++|++.|+..|=| ++|.|+...=.. ...+..+++.|++.||.|++-+.|=+...
T Consensus 4 mlGiSvY~~~~~~~~~~~yi~~a~~~Gf~~IFT----SL~~~e~~~~~~--~~~~~~l~~~a~~~g~~vi~DIsp~~l~~ 77 (372)
T 2p0o_A 4 MYGISVFLGEEITNDTIIYIKKMKALGFDGIFT----SLHIPEDDTSLY--RQRLTDLGAIAKAEKMKIMVDISGEALKR 77 (372)
T ss_dssp EEEEECCTTSCCCHHHHHHHHHHHHTTCCEEEE----EECCC-----CH--HHHHHHHHHHHHHHTCEEEEEECHHHHHT
T ss_pred eEEEEEcCCCCCHHHHHHHHHHHHHCCCCEEEc----cCCccCCChHHH--HHHHHHHHHHHHHCCCEEEEECCHHHHHH
Confidence 456778777778877889999999999998877 568886422111 24789999999999999999998855443
|
| >3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* | Back alignment and structure |
|---|
Probab=87.11 E-value=35 Score=36.45 Aligned_cols=69 Identities=20% Similarity=0.277 Sum_probs=53.3
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHhcCCee-eeeeeeccCCCCCCCCCCCcccccccCCCCCCcCCCCCChhHHHHH
Q 009890 255 SGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTF-QNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLIRQPKWGHLK 333 (523)
Q Consensus 255 ~Gwf~~wG~~~~~r~~~d~~~~~~~~~~~g~s~-~nyYM~hGGTNfG~~~G~~~~~TSYDy~Api~E~G~~~~pKy~~lk 333 (523)
.|||-+-......++++++...+.+.+++||++ +|. |-+..|.+.+..-..|+
T Consensus 288 ~~W~y~~~~d~~~ks~~~li~~l~~~V~~ngnlLLNv--------------------------gP~~~G~i~~~~~~~L~ 341 (478)
T 3ues_A 288 PGWFYHQSEDDKVMSADQLFDLWLSAVGGNSSLLLNI--------------------------PPSPEGLLAEPDVQSLK 341 (478)
T ss_dssp SSSSCCGGGTTCCCCHHHHHHHHHHHHTBTEEEEEEC--------------------------CCCTTSSCCHHHHHHHH
T ss_pred CCCCCCcCCCCCcCCHHHHHHHHHHHhccCceEEECC--------------------------CCCCCCCcCHHHHHHHH
Confidence 366655443455789999999988999999885 343 24467888777889999
Q ss_pred HHHHHHHHhhhcccCC
Q 009890 334 DLHKAIKLCEAALVAT 349 (523)
Q Consensus 334 ~lh~~i~~~~~~L~~~ 349 (523)
+++..|+.++..|+.+
T Consensus 342 e~G~wl~~~g~nla~~ 357 (478)
T 3ues_A 342 GLGRRVSEFREALASV 357 (478)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhcccccccc
Confidence 9999999999999876
|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=86.97 E-value=5.8 Score=43.08 Aligned_cols=58 Identities=22% Similarity=0.275 Sum_probs=39.5
Q ss_pred hHHHHHHHHhCCCCEEEE-ccccC--cCCCCCcee-----eccCcchHHHHHHHHHHcCCEEEEec
Q 009890 58 WPDLIQKSKDGGLDVIET-YVFWN--LHEPVRNQY-----NFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 58 W~d~l~k~Ka~GlN~V~t-YvfWn--~HEp~~G~y-----dF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
..+.|.-+|++|+|+|.+ .|+=. .|--.+-.| .|....|+.+|++.|+++||.|||-.
T Consensus 174 i~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~ 239 (583)
T 1ea9_C 174 VIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDA 239 (583)
T ss_dssp HHHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEEC
T ss_pred HHHhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 346688899999999997 45411 010011111 24456799999999999999999864
|
| >4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... | Back alignment and structure |
|---|
Probab=86.96 E-value=0.71 Score=47.87 Aligned_cols=64 Identities=13% Similarity=0.155 Sum_probs=43.4
Q ss_pred eeCCCCCccchHHHHHH----HHhCCCCEEEEc-cccCc----------CCCCCcee----eccCcchHHHHHHHHHHcC
Q 009890 48 IHYPRSTPEMWPDLIQK----SKDGGLDVIETY-VFWNL----------HEPVRNQY----NFEGRYDLVKFVKLVAEAG 108 (523)
Q Consensus 48 iHy~R~~~~~W~d~l~k----~Ka~GlN~V~tY-vfWn~----------HEp~~G~y----dF~G~~dL~~fl~la~~~G 108 (523)
+|.|-++ |.++.++ ++++|++.|.+- +.=+. |--.|..| .|....||.++|+.|++.|
T Consensus 14 ~~~f~W~---w~~ia~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy~i~~~~Gt~~df~~lv~~aH~~G 90 (496)
T 4gqr_A 14 VHLFEWR---WVDIALECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVG 90 (496)
T ss_dssp EEETTCC---HHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTT
T ss_pred EEecCCC---HHHHHHHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccCceeCCCCCCHHHHHHHHHHHHHCC
Confidence 5777774 8776543 788999999983 32111 11112223 2445579999999999999
Q ss_pred CEEEEe
Q 009890 109 LYAHLR 114 (523)
Q Consensus 109 L~Vilr 114 (523)
|+||+-
T Consensus 91 i~VilD 96 (496)
T 4gqr_A 91 VRIYVD 96 (496)
T ss_dssp CEEEEE
T ss_pred CEEEEE
Confidence 999986
|
| >3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=86.45 E-value=1.3 Score=46.25 Aligned_cols=59 Identities=19% Similarity=0.139 Sum_probs=40.3
Q ss_pred chHHHHHHHHhCCCCEEEEc-cccCcCCCCCce----e----------eccCcchHHHHHHHHHHcCCEEEEec
Q 009890 57 MWPDLIQKSKDGGLDVIETY-VFWNLHEPVRNQ----Y----------NFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 57 ~W~d~l~k~Ka~GlN~V~tY-vfWn~HEp~~G~----y----------dF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
-+.+.|..+|++|+++|.+- ++=+......|. | .|.+..+|.++++.|++.||+||+-.
T Consensus 31 ~i~~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~ 104 (449)
T 3dhu_A 31 GVTADLQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHELGMKVMLDI 104 (449)
T ss_dssp HHHTTHHHHHHHTCSEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHhHHHHHHcCCCEEEECCcccccccCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 34566788899999999973 431111111111 2 24456799999999999999999875
|
| >3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A | Back alignment and structure |
|---|
Probab=86.05 E-value=0.96 Score=49.70 Aligned_cols=45 Identities=22% Similarity=0.376 Sum_probs=38.1
Q ss_pred CCceeeEEEeEEEecCCCccccCCCeeEEEEeecCcEEEEEEcCeeeec
Q 009890 474 DQSDYLWYSLSTNIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVGE 522 (523)
Q Consensus 474 D~sDYLWY~T~v~i~~~~~~~~~~~~~~L~v~s~gh~lh~FVNg~~~G~ 522 (523)
+-+...||.++|.+.+.. .++...|++....+...|||||++||+
T Consensus 64 ~~~G~~wY~~~f~~p~~~----~~~~~~L~f~gv~~~a~V~vNG~~vg~ 108 (605)
T 3lpf_A 64 NYAGNVWYQREVFIPKGW----AGQRIVLRFDAVTHYGKVWVNNQEVME 108 (605)
T ss_dssp TCCSEEEEEEEEECCTTC----SSCEEEEEESCCBSEEEEEESSCEEEE
T ss_pred ccceEEEEEEEEECCccc----CCCEEEEEECCcceEEEEEECCEEEEE
Confidence 346678999999997432 357889999999999999999999996
|
| >3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A | Back alignment and structure |
|---|
Probab=85.92 E-value=9.7 Score=36.99 Aligned_cols=92 Identities=12% Similarity=0.139 Sum_probs=55.1
Q ss_pred eeCCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCC-ceeeccCcchHHHHHHHHHHcCCE-EEEecCceeccccCC
Q 009890 48 IHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVR-NQYNFEGRYDLVKFVKLVAEAGLY-AHLRIGPYVCAEWNF 125 (523)
Q Consensus 48 iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~-G~ydF~G~~dL~~fl~la~~~GL~-Vilr~GPyi~aEw~~ 125 (523)
+|-+-..+..+++.|++++++|++.|+.+. ..|.. ..-.++ ..++.++.++++++||. +.+. +||.
T Consensus 10 ~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~----~~~~~~~~~~~~-~~~~~~~~~~l~~~gl~~~~~h-~~~~------ 77 (303)
T 3aal_A 10 SHVSMSGKKMLLAASEEAASYGANTFMIYT----GAPQNTKRKSIE-ELNIEAGRQHMQAHGIEEIVVH-APYI------ 77 (303)
T ss_dssp EECCCCTTTTHHHHHHHHHHTTCSEEEEES----SCTTCCCCCCSG-GGCHHHHHHHHHHTTCCEEEEE-CCTT------
T ss_pred eeeecCCCccHHHHHHHHHHcCCCEEEEcC----CCCCccCCCCCC-HHHHHHHHHHHHHcCCceEEEe-cccc------
Confidence 443333345799999999999999999932 11110 000111 24789999999999994 4332 3431
Q ss_pred CCCCccccCCCCeeeecCC-hhHHHHHHHHHHHHHHHHH
Q 009890 126 GGFPLWLHFIPGIQFRTDN-EPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 126 GG~P~WL~~~p~i~~Rt~d-~~fl~~~~~~~~~i~~~ik 163 (523)
. .+-+.| +.-++...+.+++.++..+
T Consensus 78 -------~-----nl~s~d~~~~r~~~~~~~~~~i~~A~ 104 (303)
T 3aal_A 78 -------I-----NIGNTTNLDTFSLGVDFLRAEIERTE 104 (303)
T ss_dssp -------C-----CTTCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred -------c-----cCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 1 122345 5556666666666666666
|
| >3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* | Back alignment and structure |
|---|
Probab=85.66 E-value=0.58 Score=51.30 Aligned_cols=47 Identities=17% Similarity=0.261 Sum_probs=38.5
Q ss_pred CCceeeEEEeEEEecCCCccc-cCCCeeEEEEeecCcEEEEEEcCeeeec
Q 009890 474 DQSDYLWYSLSTNIKADEPLL-EDGSKTVLHVQSLGHALHAFINGKLVGE 522 (523)
Q Consensus 474 D~sDYLWY~T~v~i~~~~~~~-~~~~~~~L~v~s~gh~lh~FVNg~~~G~ 522 (523)
+-..+.||.++|.+..+ |. ..++...|++....+...|||||+++|+
T Consensus 74 ~~~G~~wYr~~f~~p~~--~~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~ 121 (613)
T 3hn3_A 74 HFVGWVWYEREVILPER--WTQDLRTRVVLRIGSAHSYAIVWVNGVDTLE 121 (613)
T ss_dssp TCCSEEEEEEEECCCHH--HHHCTTEEEEEEESCCCSEEEEEETTEEEEE
T ss_pred CCceeEEEEEEEEeCch--hhhcCCCEEEEEECCcceEEEEEECCEEEeE
Confidence 56788999999998633 21 1246789999999999999999999996
|
| >3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A | Back alignment and structure |
|---|
Probab=85.49 E-value=2.9 Score=40.46 Aligned_cols=130 Identities=17% Similarity=0.228 Sum_probs=71.6
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEE-EecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAH-LRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vi-lr~GPyi~aEw~~GG~P~WL~~ 134 (523)
.-+++.|+.++++|++.|+....... +....++++ ..++.++.++++++||.+. +..++. + ++
T Consensus 30 ~~~~~~l~~~~~~G~~~iEl~~~~~~--~~~~~~~~~-~~~~~~~~~~l~~~gl~i~~~~~~~~----~---~~------ 93 (295)
T 3cqj_A 30 ECWLERLQLAKTLGFDFVEMSVDETD--ERLSRLDWS-REQRLALVNAIVETGVRVPSMCLSAH----R---RF------ 93 (295)
T ss_dssp SCHHHHHHHHHHTTCSEEEEECCSSH--HHHGGGGCC-HHHHHHHHHHHHHHCCEEEEEEEGGG----G---TS------
T ss_pred CCHHHHHHHHHhcCCCEEEEecCCcc--cccCcccCC-HHHHHHHHHHHHHcCCeEEEEecCcc----c---CC------
Confidence 46899999999999999999643210 000112222 2368899999999999986 332110 0 01
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCc---ccHHHHHHHHHHHHhcCC
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGA---AGKSYIKWAAGMALSLDT 211 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~---~~~~y~~~l~~~~~~~g~ 211 (523)
.+-+.|+.-++...+.+++.++..+. | |.+.|.+.--..+ ......+ .-.+.++.|.+.|++.|+
T Consensus 94 ----~l~~~d~~~r~~~~~~~~~~i~~A~~--l----G~~~v~~~~~~~~--~~~~~~~~~~~~~~~l~~l~~~a~~~Gv 161 (295)
T 3cqj_A 94 ----PLGSEDDAVRAQGLEIMRKAIQFAQD--V----GIRVIQLAGYDVY--YQEANNETRRRFRDGLKESVEMASRAQV 161 (295)
T ss_dssp ----CTTCSSHHHHHHHHHHHHHHHHHHHH--H----TCCEEEECCCSCS--SSCCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ----CCCCCCHHHHHHHHHHHHHHHHHHHH--c----CCCEEEECCCCCC--cCcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 12234566566666677777777763 2 3455544310000 0000000 122345666777777777
Q ss_pred Cc
Q 009890 212 GV 213 (523)
Q Consensus 212 ~v 213 (523)
.+
T Consensus 162 ~l 163 (295)
T 3cqj_A 162 TL 163 (295)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A* | Back alignment and structure |
|---|
Probab=84.36 E-value=4.9 Score=38.23 Aligned_cols=92 Identities=8% Similarity=0.067 Sum_probs=57.1
Q ss_pred chHHHHHHHHhCCCCEEEEccccCcCCCCCceee---ccCcchHHHHHHHHHHcCCEE--EEecCceeccccCCCCCCcc
Q 009890 57 MWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYN---FEGRYDLVKFVKLVAEAGLYA--HLRIGPYVCAEWNFGGFPLW 131 (523)
Q Consensus 57 ~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~yd---F~G~~dL~~fl~la~~~GL~V--ilr~GPyi~aEw~~GG~P~W 131 (523)
-+++.|+.++++|++.|+.+. +.|. .|. ++ ..++.++.++++++||.+ +.--+||.
T Consensus 13 ~l~~~l~~~~~~G~~~vEl~~----~~~~--~~~~~~~~-~~~~~~~~~~l~~~gl~~~~~~~~~~~~------------ 73 (285)
T 1qtw_A 13 GLANAAIRAAEIDATAFALFT----KNQR--QWRAAPLT-TQTIDEFKAACEKYHYTSAQILPHDSYL------------ 73 (285)
T ss_dssp CHHHHHHHHHHTTCSEEECCS----SCSS--CSSCCCCC-HHHHHHHHHHHHHTTCCGGGBCCBCCTT------------
T ss_pred CHHHHHHHHHHcCCCEEEeeC----CCCC--cCcCCCCC-HHHHHHHHHHHHHcCCCceeEEecCCcc------------
Confidence 489999999999999999942 1121 111 11 247899999999999974 22112321
Q ss_pred ccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecc
Q 009890 132 LHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQ 179 (523)
Q Consensus 132 L~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~Q 179 (523)
+.+-+.|+.-++...+.+++.++..+ .| |.+.|-+.
T Consensus 74 ------~~l~~~~~~~r~~~~~~~~~~i~~A~--~l----Ga~~v~~~ 109 (285)
T 1qtw_A 74 ------INLGHPVTEALEKSRDAFIDEMQRCE--QL----GLSLLNFH 109 (285)
T ss_dssp ------CCTTCSSHHHHHHHHHHHHHHHHHHH--HT----TCCEEEEC
T ss_pred ------cccCCCCHHHHHHHHHHHHHHHHHHH--Hc----CCCEEEEC
Confidence 01223456666666667777777776 22 45666554
|
| >3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=83.82 E-value=11 Score=37.35 Aligned_cols=95 Identities=17% Similarity=0.194 Sum_probs=62.9
Q ss_pred ccchHHHHHHHHhC-CCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEE-EecCceeccccCCCCCCccc
Q 009890 55 PEMWPDLIQKSKDG-GLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAH-LRIGPYVCAEWNFGGFPLWL 132 (523)
Q Consensus 55 ~~~W~d~l~k~Ka~-GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vi-lr~GPyi~aEw~~GG~P~WL 132 (523)
+.-+++.|++++++ |++.|++.++|.. ..++.++-++++++||.+. +-+..+ + |.|.
T Consensus 32 ~~~~~e~l~~aa~~~G~~~VEl~~~~~~------------~~~~~~l~~~l~~~Gl~i~~~~~~~~--------~-~~~~ 90 (333)
T 3ktc_A 32 ALSTIDQINAAKEVGELSYVDLPYPFTP------------GVTLSEVKDALKDAGLKAIGITPEIY--------L-QKWS 90 (333)
T ss_dssp CCCHHHHHHHHHHHSSEEEEEEEESCST------------TCCHHHHHHHHHHHTCEEEEEEECTT--------S-GGGT
T ss_pred CCCHHHHHHHHHHhCCCCEEEecCCCcc------------hhHHHHHHHHHHHcCCeEEEEecCcC--------c-cccc
Confidence 44458999999999 9999999766643 2378999999999999986 333210 1 2221
Q ss_pred cCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccc
Q 009890 133 HFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQI 180 (523)
Q Consensus 133 ~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QI 180 (523)
. + .+-+.|+..++...+.+++.++..+ .| |.+.|-+..
T Consensus 91 ~---g-~l~~~d~~~r~~~i~~~~~~i~~A~--~L----Ga~~vv~~~ 128 (333)
T 3ktc_A 91 R---G-AFTNPDPAARAAAFELMHESAGIVR--EL----GANYVKVWP 128 (333)
T ss_dssp T---C-STTCSSHHHHHHHHHHHHHHHHHHH--HH----TCSEEEECC
T ss_pred C---C-CCCCcCHHHHHHHHHHHHHHHHHHH--Hh----CCCEEEECC
Confidence 1 0 1233567777777777777777777 33 456554443
|
| >1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* | Back alignment and structure |
|---|
Probab=83.80 E-value=1.6 Score=46.82 Aligned_cols=57 Identities=11% Similarity=0.158 Sum_probs=38.5
Q ss_pred HHHHHHHHhCCCCEEEE-ccccCcCC-----CCC--cee---------eccCcchHHHHHHHHHHcCCEEEEec
Q 009890 59 PDLIQKSKDGGLDVIET-YVFWNLHE-----PVR--NQY---------NFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~t-YvfWn~HE-----p~~--G~y---------dF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
.+.|.-+|++|+++|.+ .++=+..+ +.+ .-| .|....||.++++.|+++||+|||-.
T Consensus 40 ~~~LdyLk~LGvt~IwL~Pi~e~~~~~~~~~~~~~~~GY~~~~id~~p~~Gt~~dfk~Lv~~aH~~GI~VilD~ 113 (527)
T 1gcy_A 40 RQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLYDV 113 (527)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEeCCccccccccccCCCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 45677889999999997 34411100 111 011 23446789999999999999999873
|
| >1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5 | Back alignment and structure |
|---|
Probab=83.63 E-value=12 Score=34.95 Aligned_cols=124 Identities=14% Similarity=0.094 Sum_probs=69.7
Q ss_pred ccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEE-EecCceeccccCCCCCCcccc
Q 009890 55 PEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAH-LRIGPYVCAEWNFGGFPLWLH 133 (523)
Q Consensus 55 ~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vi-lr~GPyi~aEw~~GG~P~WL~ 133 (523)
..-+++.+++++++|++.|+...+ ++ .++.++.++++++||.+. +.. |+. .|..|..+
T Consensus 14 ~~~~~~~l~~~~~~G~~~vEl~~~----------~~----~~~~~~~~~l~~~gl~~~~~~~-~~~--~~~~g~~~---- 72 (260)
T 1k77_A 14 EVPFIERFAAARKAGFDAVEFLFP----------YN----YSTLQIQKQLEQNHLTLALFNT-APG--DINAGEWG---- 72 (260)
T ss_dssp TSCGGGHHHHHHHHTCSEEECSCC----------TT----SCHHHHHHHHHHTTCEEEEEEC-CCC--CGGGTCSC----
T ss_pred CCCHHHHHHHHHHhCCCEEEecCC----------CC----CCHHHHHHHHHHcCCceEEEec-CCc--ccccccCC----
Confidence 455788999999999999998642 11 258899999999999987 443 321 12111110
Q ss_pred CCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccc--cccCcccHHHHHHHHHHHHhcCC
Q 009890 134 FIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNID--SAYGAAGKSYIKWAAGMALSLDT 211 (523)
Q Consensus 134 ~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~--~~~g~~~~~y~~~l~~~~~~~g~ 211 (523)
+ +.|+.-++...+.+++.++..++ | |.+.|-+....-..... ..+ ..-.+.++.+.+.|++.|+
T Consensus 73 ----~---~~~~~~~~~~~~~~~~~i~~a~~--l----G~~~v~~~~g~~~~~~~~~~~~-~~~~~~l~~l~~~a~~~gv 138 (260)
T 1k77_A 73 ----L---SALPGREHEAHADIDLALEYALA--L----NCEQVHVMAGVVPAGEDAERYR-AVFIDNIRYAADRFAPHGK 138 (260)
T ss_dssp ----S---TTCTTCHHHHHHHHHHHHHHHHH--T----TCSEEECCCCBCCTTSCHHHHH-HHHHHHHHHHHHHHGGGTC
T ss_pred ----C---CCChhHHHHHHHHHHHHHHHHHH--c----CCCEEEECcCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHcCC
Confidence 0 12344445555666776676662 2 44555443211100000 000 0123455666777777776
Q ss_pred Cc
Q 009890 212 GV 213 (523)
Q Consensus 212 ~v 213 (523)
.+
T Consensus 139 ~l 140 (260)
T 1k77_A 139 RI 140 (260)
T ss_dssp EE
T ss_pred EE
Confidence 54
|
| >2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A* | Back alignment and structure |
|---|
Probab=83.43 E-value=5.3 Score=38.11 Aligned_cols=82 Identities=13% Similarity=0.220 Sum_probs=55.1
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFI 135 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~ 135 (523)
.-+++.++.++++|++.|+....-. +. +. ..++.++.++++++||.+..-.+ +|.
T Consensus 17 ~~~~~~l~~~~~~G~~~vEl~~~~~-~~-------~~-~~~~~~~~~~l~~~gl~~~~~~~-----------~~~----- 71 (290)
T 2qul_A 17 VDFPATAKRIAGLGFDLMEISLGEF-HN-------LS-DAKKRELKAVADDLGLTVMCCIG-----------LKS----- 71 (290)
T ss_dssp CCHHHHHHHHHHTTCSEEEEESTTG-GG-------SC-HHHHHHHHHHHHHHTCEEEEEEE-----------ECG-----
T ss_pred ccHHHHHHHHHHhCCCEEEEecCCc-cc-------cc-hhhHHHHHHHHHHcCCceEEecC-----------CCC-----
Confidence 4578999999999999999964311 11 00 14789999999999999876332 110
Q ss_pred CCeeeecCChhHHHHHHHHHHHHHHHHH
Q 009890 136 PGIQFRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 136 p~i~~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
++.+-+.|+..++...+.+++.++..+
T Consensus 72 -~~~l~~~d~~~r~~~~~~~~~~i~~a~ 98 (290)
T 2qul_A 72 -EYDFASPDKSVRDAGTEYVKRLLDDCH 98 (290)
T ss_dssp -GGCTTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 011233466666666677777777777
|
| >2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=83.32 E-value=6.5 Score=41.09 Aligned_cols=58 Identities=19% Similarity=0.163 Sum_probs=39.9
Q ss_pred hHHHHHHHHhCCCCEEEE-cccc--CcCCCCCcee-----eccCcchHHHHHHHHHHcCCEEEEec
Q 009890 58 WPDLIQKSKDGGLDVIET-YVFW--NLHEPVRNQY-----NFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 58 W~d~l~k~Ka~GlN~V~t-YvfW--n~HEp~~G~y-----dF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
..+.|.-+|++|+|+|.+ .++= ..|--.+-.| .|....|+.++++.|+++||.|||-.
T Consensus 52 i~~~LdyL~~LGv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~ 117 (475)
T 2z1k_A 52 VAEKLPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDG 117 (475)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHhHHHHHcCCCEEEECCCcCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 456788889999999996 3431 1111111111 24456799999999999999999874
|
| >2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A* | Back alignment and structure |
|---|
Probab=82.92 E-value=5 Score=38.25 Aligned_cols=83 Identities=11% Similarity=0.164 Sum_probs=52.0
Q ss_pred chHHHHHHHHhCCCCEEEEccccCcCCCCCceeec--cCcchHHHHHHHHHHcCCEE--EEecCceeccccCCCCCCccc
Q 009890 57 MWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNF--EGRYDLVKFVKLVAEAGLYA--HLRIGPYVCAEWNFGGFPLWL 132 (523)
Q Consensus 57 ~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF--~G~~dL~~fl~la~~~GL~V--ilr~GPyi~aEw~~GG~P~WL 132 (523)
-+++.|++++++|++.|+.+.. .|. .|.. -...++.++.++++++||.+ +.--+||.
T Consensus 13 ~~~~~l~~~~~~G~~~iEl~~~----~~~--~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~h~~~~------------- 73 (287)
T 2x7v_A 13 GFDRVPQDTVNIGGNSFQIFPH----NAR--SWSAKLPSDEAATKFKREMKKHGIDWENAFCHSGYL------------- 73 (287)
T ss_dssp CGGGHHHHHHHTTCSEEEECSC----CCS--SSCCCCCCHHHHHHHHHHHHHHTCCGGGEEEECCTT-------------
T ss_pred CHHHHHHHHHHcCCCEEEEeCC----Ccc--cccccCCCHHHHHHHHHHHHHcCCCcceeEEecccc-------------
Confidence 4789999999999999999531 111 1111 01247899999999999984 32233431
Q ss_pred cCCCCeeeecCChhHHHHHHHHHHHHHHHHH
Q 009890 133 HFIPGIQFRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 133 ~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
+.+-+.|+.-++...+.+++.++..+
T Consensus 74 -----~~~~~~~~~~r~~~~~~~~~~i~~A~ 99 (287)
T 2x7v_A 74 -----INLASPKDDIWQKSVELLKKEVEICR 99 (287)
T ss_dssp -----CCTTCSSHHHHHHHHHHHHHHHHHHH
T ss_pred -----cccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 01122355555666666777777666
|
| >1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* | Back alignment and structure |
|---|
Probab=82.91 E-value=1.9 Score=45.11 Aligned_cols=64 Identities=16% Similarity=0.185 Sum_probs=42.3
Q ss_pred eeCCCCCccchHHHHH----HHHhCCCCEEEE-ccccCcCC------CCCcee----eccCcchHHHHHHHHHHcCCEEE
Q 009890 48 IHYPRSTPEMWPDLIQ----KSKDGGLDVIET-YVFWNLHE------PVRNQY----NFEGRYDLVKFVKLVAEAGLYAH 112 (523)
Q Consensus 48 iHy~R~~~~~W~d~l~----k~Ka~GlN~V~t-YvfWn~HE------p~~G~y----dF~G~~dL~~fl~la~~~GL~Vi 112 (523)
+|.|-++ |..+++ -+|++|+++|.+ .++=+... -.+--| .|....||.++++.|++.||.||
T Consensus 6 ~q~F~w~---~~gi~~~lldyL~~LGv~~I~l~Pi~~~~~~~~~~~gY~~~~y~idp~~Gt~~dfk~Lv~~aH~~Gi~Vi 82 (448)
T 1g94_A 6 VHLFEWN---WQDVAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYELQSRGGNRAQFIDMVNRCSAAGVDIY 82 (448)
T ss_dssp EEETTCC---HHHHHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEE
T ss_pred EEEecCc---HHHHHHHHHHHHHHcCCCEEEECCccccCCCCCCcccccccccccCCCCCCHHHHHHHHHHHHHCCCEEE
Confidence 4666665 655554 469999999997 34422110 000012 24556799999999999999999
Q ss_pred Ee
Q 009890 113 LR 114 (523)
Q Consensus 113 lr 114 (523)
|-
T Consensus 83 lD 84 (448)
T 1g94_A 83 VD 84 (448)
T ss_dssp EE
T ss_pred EE
Confidence 86
|
| >2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A* | Back alignment and structure |
|---|
Probab=82.76 E-value=7 Score=38.06 Aligned_cols=82 Identities=16% Similarity=0.210 Sum_probs=56.8
Q ss_pred ccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 55 PEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 55 ~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..-+++ |+.++++|++.|+....-. +. +. ..++.++.++++++||.+.. ..|+ |
T Consensus 36 ~~~l~~-l~~~~~~G~~~vEl~~~~~-~~-------~~-~~~~~~l~~~l~~~gl~i~~-~~~~----------~----- 89 (309)
T 2hk0_A 36 AKFGPY-IEKVAKLGFDIIEVAAHHI-NE-------YS-DAELATIRKSAKDNGIILTA-GIGP----------S----- 89 (309)
T ss_dssp SCSHHH-HHHHHHTTCSEEEEEHHHH-TT-------SC-HHHHHHHHHHHHHTTCEEEE-ECCC----------C-----
T ss_pred cccHHH-HHHHHHhCCCEEEeccCCc-cc-------cc-hhhHHHHHHHHHHcCCeEEE-ecCC----------C-----
Confidence 456889 9999999999999965311 11 10 14789999999999999887 3332 1
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHH
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
++..+-+.|+..++...+.+++.++..+
T Consensus 90 -~~~~l~~~d~~~r~~~~~~~~~~i~~A~ 117 (309)
T 2hk0_A 90 -KTKNLSSEDAAVRAAGKAFFERTLSNVA 117 (309)
T ss_dssp -SSSCSSCSCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0122344567777777777888888777
|
| >1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12 | Back alignment and structure |
|---|
Probab=82.36 E-value=1.4 Score=45.93 Aligned_cols=71 Identities=18% Similarity=0.113 Sum_probs=53.0
Q ss_pred EEEEeeCCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceec
Q 009890 44 ISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVC 120 (523)
Q Consensus 44 ~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~ 120 (523)
++=++++.....+.-.+.|++|++.|+..|=| ++|.|+...=. -...+..+++.|++.||.|++-+.|=+.
T Consensus 29 LGiSvYp~~~~~~~~~~Yi~~a~~~Gf~~IFT----SL~~~e~~~~~--~~~~~~~l~~~a~~~g~~vi~DVsp~~~ 99 (385)
T 1x7f_A 29 LGISLYPEHSTKEKDMAYISAAARHGFSRIFT----CLLSVNRPKEE--IVAEFKEIINHAKDNNMEVILDVAPAVF 99 (385)
T ss_dssp EEEEECGGGSCHHHHHHHHHHHHTTTEEEEEE----EECCC----------HHHHHHHHHHHHTTCEEEEEECTTCC
T ss_pred eEEEEcCCCCCHHHHHHHHHHHHHCCCCEEEc----cCCccCCChHH--HHHHHHHHHHHHHHCCCEEEEECCHHHH
Confidence 67778777777777778999999999988876 56777542211 1247999999999999999999987443
|
| >2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* | Back alignment and structure |
|---|
Probab=81.83 E-value=9.1 Score=43.05 Aligned_cols=112 Identities=20% Similarity=0.299 Sum_probs=68.9
Q ss_pred CCCccchHHHHHHHHhCCCCEEEEccccCcCCC----CCceeeccCcc---hHHHHHHHHHHcCCEEEEecCceecc-cc
Q 009890 52 RSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEP----VRNQYNFEGRY---DLVKFVKLVAEAGLYAHLRIGPYVCA-EW 123 (523)
Q Consensus 52 R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp----~~G~ydF~G~~---dL~~fl~la~~~GL~Vilr~GPyi~a-Ew 123 (523)
..+.+.-.+.++.||+.|++.|-+--.|..... .-|.|.+.-.+ .+..+++.+++.||++.+..-|+..+ +-
T Consensus 346 ~~~ee~v~~~ad~~~~~G~~~~viDDGW~~~r~~~~~~~Gd~~~d~~kFP~Glk~lv~~ih~~Glk~GlW~~P~~v~~~S 425 (732)
T 2xn2_A 346 DFNEDKLKTIVDKAKKLGLEMFVLDDGWFGHRDDDNSSLGDWKVYKKKFPNGLGHFADYVHEQGLKFGLWFEPEMISYES 425 (732)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEECSSSBTTCSSTTSCTTCCSBCTTTCTTCHHHHHHHHHHTTCEEEEEECTTEECSSS
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEcCcccccCCCCccccCceeeCchhcCccHHHHHHHHHHcCCEEEEEeCccccCCCC
Confidence 344455567889999999999988777874321 22655544321 39999999999999999999887421 10
Q ss_pred -CCCCCCccccCCCCe---------eeecCChhHHHHHHHH-HHHHHHHHHhccc
Q 009890 124 -NFGGFPLWLHFIPGI---------QFRTDNEPFKAEMQRF-TAKIVDMMKQEKL 167 (523)
Q Consensus 124 -~~GG~P~WL~~~p~i---------~~Rt~d~~fl~~~~~~-~~~i~~~ik~~~l 167 (523)
-+.-.|.|+...++- .+-..+| +++.| ++.+.+.+++.++
T Consensus 426 ~l~~~hpdw~~~~~g~~~~~~~~~~~LD~t~P----ev~~~i~~~l~~~~~~~GV 476 (732)
T 2xn2_A 426 NLYKEHPDYLXHVPGRKPCPSRNQYVLELGRK----EVRDNIFEQMVKILDSKKI 476 (732)
T ss_dssp HHHHHCGGGBCCCTTSCCCCBTTBEEBCTTSH----HHHHHHHHHHHHHHTTSCC
T ss_pred HHHHhCchheecCCCCCCccCCceEEEcCCCH----HHHHHHHHHHHHHHHHcCC
Confidence 011246676654431 1222233 34444 4556666776544
|
| >1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=81.56 E-value=2.3 Score=45.38 Aligned_cols=56 Identities=5% Similarity=0.080 Sum_probs=37.9
Q ss_pred HHHHHHHhCCCCEEEE-ccccCc----CCCC------Ccee--------eccCcchHHHHHHHHHHcCCEEEEec
Q 009890 60 DLIQKSKDGGLDVIET-YVFWNL----HEPV------RNQY--------NFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 60 d~l~k~Ka~GlN~V~t-YvfWn~----HEp~------~G~y--------dF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
+.|.-+|++|+++|.+ .++=+. |--. .|+| .|....||.++++.|++.||+|||-.
T Consensus 28 ~~LdyLk~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~l~~f~~~~~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 102 (515)
T 1hvx_A 28 NEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADV 102 (515)
T ss_dssp HHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHhcCCCEEEeCCcccCCCCCCCCcCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4566779999999997 343211 0000 0111 25556799999999999999999863
|
| >1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A | Back alignment and structure |
|---|
Probab=81.55 E-value=15 Score=39.73 Aligned_cols=57 Identities=16% Similarity=0.176 Sum_probs=39.5
Q ss_pred HHHHHHHHhCCCCEEEE-ccccC--cCCCCCcee-----eccCcchHHHHHHHHHHcCCEEEEec
Q 009890 59 PDLIQKSKDGGLDVIET-YVFWN--LHEPVRNQY-----NFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~t-YvfWn--~HEp~~G~y-----dF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
.+.|.-+|++|+|+|.+ .|+=. .|--.+-.| .|....|+.++++.|+++||.|||-.
T Consensus 176 ~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD~ 240 (585)
T 1wzl_A 176 IDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDA 240 (585)
T ss_dssp HHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 46688899999999996 34310 111111111 24456799999999999999999873
|
| >3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=81.40 E-value=1.4 Score=49.26 Aligned_cols=43 Identities=23% Similarity=0.482 Sum_probs=36.7
Q ss_pred ceeeEEEeEEEecCCCccccCCCeeEEEEeecCcEEEEEEcCeeeec
Q 009890 476 SDYLWYSLSTNIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVGE 522 (523)
Q Consensus 476 sDYLWY~T~v~i~~~~~~~~~~~~~~L~v~s~gh~lh~FVNg~~~G~ 522 (523)
.-..||.++|++.++ +.++...|++....+...|||||+++|+
T Consensus 59 ~g~~wYr~~f~~p~~----~~~~~~~L~f~gv~~~a~V~vNG~~vg~ 101 (692)
T 3fn9_A 59 EGAGYYRKTQFFPHD----LEGKRVFLRFEGVGACAEVYVNGKLAGT 101 (692)
T ss_dssp CSEEEEEEEEEECGG----GTTCEEEEEESCCBSEEEEEETTEEEEE
T ss_pred ceEEEEEEEEEECch----hCCCeEEEEECCccEeeEEEECCEEeee
Confidence 445899999999753 2357889999999999999999999996
|
| >3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A | Back alignment and structure |
|---|
Probab=81.40 E-value=4.1 Score=38.49 Aligned_cols=118 Identities=15% Similarity=0.109 Sum_probs=71.3
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEE-EecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAH-LRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vi-lr~GPyi~aEw~~GG~P~WL~~ 134 (523)
.-+++.|++++++|++.|+.... +++ ..++.++.++++++||.+. +.+++ .
T Consensus 18 ~~~~~~l~~~~~~G~~~vEl~~~-----------~~~-~~~~~~~~~~l~~~gl~~~~~~~~~-------------~--- 69 (275)
T 3qc0_A 18 CGFAEAVDICLKHGITAIAPWRD-----------QVA-AIGLGEAGRIVRANGLKLTGLCRGG-------------F--- 69 (275)
T ss_dssp CCHHHHHHHHHHTTCCEEECBHH-----------HHH-HHCHHHHHHHHHHHTCEESCEEEEE-------------C---
T ss_pred CCHHHHHHHHHHcCCCEEEeccc-----------ccc-ccCHHHHHHHHHHcCCceEEeecCC-------------C---
Confidence 45789999999999999998542 111 2468999999999999875 33221 0
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccc-ccc--ccccCcccHHHHHHHHHHHHhcCC
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEY-GNI--DSAYGAAGKSYIKWAAGMALSLDT 211 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEy-g~~--~~~~g~~~~~y~~~l~~~~~~~g~ 211 (523)
+-+.|+.-++...+.+++.++..+. | |.+.|.+....-. +.. ...+ ..-.+.++.+.+.|++.|+
T Consensus 70 -----~~~~d~~~r~~~~~~~~~~i~~a~~--l----G~~~v~~~~g~~~~~~~~~~~~~-~~~~~~l~~l~~~a~~~gv 137 (275)
T 3qc0_A 70 -----FPAPDASGREKAIDDNRRAVDEAAE--L----GADCLVLVAGGLPGGSKNIDAAR-RMVVEGIAAVLPHARAAGV 137 (275)
T ss_dssp -----CCCSSHHHHHHHHHHHHHHHHHHHH--T----TCSCEEEECBCCCTTCCCHHHHH-HHHHHHHHHHHHHHHHHTC
T ss_pred -----cCCCCHHHHHHHHHHHHHHHHHHHH--h----CCCEEEEeeCCCCCCCcCHHHHH-HHHHHHHHHHHHHHHHcCC
Confidence 1123565566666677777777773 2 4455554431100 000 0000 1123556777777888887
Q ss_pred Cc
Q 009890 212 GV 213 (523)
Q Consensus 212 ~v 213 (523)
.+
T Consensus 138 ~l 139 (275)
T 3qc0_A 138 PL 139 (275)
T ss_dssp CE
T ss_pred EE
Confidence 64
|
| >2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=81.21 E-value=6.2 Score=41.47 Aligned_cols=58 Identities=16% Similarity=0.174 Sum_probs=40.2
Q ss_pred hHHHHHHHHhCCCCEEEE-ccccCcCC----------CCCcee-----eccCcchHHHHHHHHHHcCCEEEEec
Q 009890 58 WPDLIQKSKDGGLDVIET-YVFWNLHE----------PVRNQY-----NFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 58 W~d~l~k~Ka~GlN~V~t-YvfWn~HE----------p~~G~y-----dF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
..+.|.-+|++|+|+|.+ .++-+... -.+-.| .|....|+.++++.|+++||.|||-.
T Consensus 45 i~~~LdyL~~LGv~~I~l~Pi~~~~~~~~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~ 118 (484)
T 2aaa_A 45 IIDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDV 118 (484)
T ss_dssp HHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEeCccccCcccccccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 356677889999999997 45432211 111111 14456799999999999999999864
|
| >3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=81.20 E-value=1.5 Score=48.54 Aligned_cols=44 Identities=23% Similarity=0.350 Sum_probs=37.2
Q ss_pred CceeeEEEeEEEecCCCccccCCCeeEEEEeecCcEEEEEEcCeeeec
Q 009890 475 QSDYLWYSLSTNIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVGE 522 (523)
Q Consensus 475 ~sDYLWY~T~v~i~~~~~~~~~~~~~~L~v~s~gh~lh~FVNg~~~G~ 522 (523)
.....||.++|++.+. +.++...|++....+...|||||+++|+
T Consensus 47 ~~g~~wYr~~f~~p~~----~~~~~~~L~f~gv~~~a~V~vNG~~vg~ 90 (667)
T 3cmg_A 47 KRGIGNYEKALYIRPE----WKGKRLFLRFDGVNSIADVFINRKHIGE 90 (667)
T ss_dssp CCSEEEEEEEEECCGG----GTTSEEEEEESCCBSEEEEEETTEEEEE
T ss_pred cceeEEEEEEEECCcc----cCCCEEEEEECCccceeEEEECCEEEee
Confidence 3567999999998742 2357889999999999999999999995
|
| >2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A | Back alignment and structure |
|---|
Probab=80.70 E-value=7.8 Score=40.75 Aligned_cols=57 Identities=12% Similarity=0.152 Sum_probs=39.0
Q ss_pred HHHHHHHHhCCCCEEEE-ccccC--cCCCCCcee-----eccCcchHHHHHHHHHHcCCEEEEec
Q 009890 59 PDLIQKSKDGGLDVIET-YVFWN--LHEPVRNQY-----NFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~t-YvfWn--~HEp~~G~y-----dF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
.+.|.-+|++|+|+|.+ .++=. .|--.+-.| .|....|+.++++.|++.||+|||-.
T Consensus 59 ~~~LdyL~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~ 123 (488)
T 2wc7_A 59 MEDLDYIQNLGINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDG 123 (488)
T ss_dssp HHTHHHHHHHTCCEEEESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 46678889999999997 34311 111111111 24456799999999999999999874
|
| >1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* | Back alignment and structure |
|---|
Probab=80.53 E-value=19 Score=38.92 Aligned_cols=57 Identities=21% Similarity=0.248 Sum_probs=39.7
Q ss_pred HHHHHHHHhCCCCEEEE-ccccC--cCCCCCcee-----eccCcchHHHHHHHHHHcCCEEEEec
Q 009890 59 PDLIQKSKDGGLDVIET-YVFWN--LHEPVRNQY-----NFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~t-YvfWn--~HEp~~G~y-----dF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
.+.|.-+|++|+|+|.+ .|+=. .|--.+-.| .|....++.++++.|+++||.|||-.
T Consensus 179 ~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~ 243 (588)
T 1j0h_A 179 IDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDA 243 (588)
T ss_dssp HHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 46688899999999996 45421 111111111 24456799999999999999999874
|
| >3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A | Back alignment and structure |
|---|
Probab=80.52 E-value=2.1 Score=46.74 Aligned_cols=57 Identities=12% Similarity=0.079 Sum_probs=40.6
Q ss_pred HHHHHHHHhCCCCEEEE-ccccCc------CCCCCcee-----eccCcchHHHHHHHHHHcCCEEEEec
Q 009890 59 PDLIQKSKDGGLDVIET-YVFWNL------HEPVRNQY-----NFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~t-YvfWn~------HEp~~G~y-----dF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
.+.|.-+|++|+|+|.+ .++-+. |--.+-.| .|....|+.++++.|++.||+||+-.
T Consensus 151 ~~~Ldyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~ 219 (601)
T 3edf_A 151 IDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDV 219 (601)
T ss_dssp HHTHHHHHHTTCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 45677779999999997 455332 22222222 24566799999999999999999864
|
| >1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* | Back alignment and structure |
|---|
Probab=80.02 E-value=8.4 Score=42.66 Aligned_cols=57 Identities=18% Similarity=0.171 Sum_probs=40.4
Q ss_pred HHHHHHHHhCCCCEEEE-ccccCcCCCCC-c-----ee---e-------ccCcchHHHHHHHHHHcCCEEEEec
Q 009890 59 PDLIQKSKDGGLDVIET-YVFWNLHEPVR-N-----QY---N-------FEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~t-YvfWn~HEp~~-G-----~y---d-------F~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
.+.|.-+|++|+++|.+ .++=+..+|.. | -| | |....|+.++++.|+++||+|||-.
T Consensus 55 ~~kLdyLk~LGv~aIwL~Pi~~~~~~~~~~g~~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~ 128 (686)
T 1qho_A 55 RQKLPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDF 128 (686)
T ss_dssp HHTHHHHHHHTCCEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhHHHHhcCCCEEEECccccCCcccccCCCCCcCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 45677789999999997 46533333310 1 12 2 4456799999999999999999863
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 523 | ||||
| d1tg7a5 | 354 | c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-ter | 1e-105 | |
| d2vzsa5 | 339 | c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolato | 8e-15 | |
| d1kwga2 | 393 | c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus t | 6e-13 |
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Length = 354 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Score = 318 bits (815), Expect = e-105
Identities = 101/351 (28%), Positives = 146/351 (41%), Gaps = 40/351 (11%)
Query: 27 VTYDHRAVVIGGKRRVLISGSIHYPR-STPEMWPDLIQKSKDGGLDVIETYVFWNLHEPV 85
VT+D ++ + G+R ++ SG +H R ++ D+ +K K G + + YV W L E
Sbjct: 6 VTWDEHSIFVNGERLMIFSGEVHPYRLPVASLYIDIFEKVKALGFNCVSFYVDWALLEGN 65
Query: 86 RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNE 145
Y+ EG +DL F EAG+Y R GPY+ AE + GGFP WL + GI RT +E
Sbjct: 66 PGHYSAEGIFDLQPFFDAAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVDGI-LRTSDE 124
Query: 146 PFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAY-GAAGKSYIKWAAG 204
+ + + I + K + GGPIIL Q ENEY Y G SY+++
Sbjct: 125 AYLKATDNYASNIAATIA--KAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIED 182
Query: 205 MALSLDTGVPWVMC----QQSDAPDPIINTCNGFYCDQFTP------------------- 241
A VP++ +AP + + D +
Sbjct: 183 HARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGNLPTYF 242
Query: 242 ------NSNNKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQR-----GGTFQNY 290
S + P E G F +GG + L R F + G F N
Sbjct: 243 HTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLNL 302
Query: 291 YMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKL 341
YM GGTN+ G P TSYDY + + E I + K+ LK L K+
Sbjct: 303 YMIFGGTNWGNL-GHPGGYTSYDYGSAISESRNITREKYSELKLLGNFAKV 352
|
| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exochitosanase CsxA species: Amycolatopsis orientalis [TaxId: 31958]
Score = 73.4 bits (179), Expect = 8e-15
Identities = 31/303 (10%), Positives = 77/303 (25%), Gaps = 42/303 (13%)
Query: 30 DHRAVVIGGKRRVLISGSIH---YPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVR 86
R + GK ++ G + R D ++ + GL+ +
Sbjct: 10 GGRQYSVNGKPLLIRGGGYTPDLFLRWNETAAADKLKYVLNLGLNTVRLEGHIE------ 63
Query: 87 NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEP 146
+ +G W W + G +
Sbjct: 64 ------------------PDEFFDIADDLGVLTMPGWEC--CDKWEGQVNGEEKGEPWVE 103
Query: 147 FKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENE---YGNIDSAYGAAGKSYIKWAA 203
++ A + ++ + + S +I I ++ I+ Y A K+
Sbjct: 104 --SDYPIAKASMFSEAERLRDHPS----VISFHIGSDFAPDRRIEQGYLDAMKAADFLLP 157
Query: 204 GMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQFTPNSNNKPKMWTENWSGWFLSFGG 263
+ + P P ++ D+ + +E +
Sbjct: 158 VIPAASARPSPITGASGMKMNGPYDYVPPVYWYDKSQKDRGGAWSFNSET--SAGVDI-- 213
Query: 264 AVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGL 323
++ + + + + Y+ T + G ++ Y A L+++
Sbjct: 214 PTMDTLKRMMSASELDTMWKNPSAKQYHRSSSDTFGNLKLFGDALTKRYGASANLNDFVR 273
Query: 324 IRQ 326
Q
Sbjct: 274 KAQ 276
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Score = 68.2 bits (165), Expect = 6e-13
Identities = 38/291 (13%), Positives = 78/291 (26%), Gaps = 12/291 (4%)
Query: 46 GSIHYPRSTP-EMWPDLIQKSKDGGLDVIETYVF-WNLHEPVRNQYNFEGRYDLVKFVKL 103
G +YP P E W + ++ ++ GL + F W L EP + + L + +
Sbjct: 3 GVCYYPEHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEWG---WLDEAIAT 59
Query: 104 VAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEM--QRFTAKIVDM 161
+A GL L +W +P L + R + + +
Sbjct: 60 LAAEGLKVVLGTPTATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRI 119
Query: 162 MKQEKLYASQGGPIILSQIENEYGNIDSAY---GAAGKSYIKWAAGMALSLDTGVPWVMC 218
+ + Q +NEYG D+ +++ W +++
Sbjct: 120 VTLLAERYGGLEAVAGFQTDNEYGCHDTVRCYCPRCQEAFRGWLEARYGTIEALNE--AW 177
Query: 219 QQSDAPDPIINTCNGFYCDQFTPNSNNKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVA 278
+ + N + ++ + + + A
Sbjct: 178 GTAFWSQRYRSFAEVELPHLTVAEPNPSHLLDYYRFASDQVRAFNRLQVEILRAHAPGKF 237
Query: 279 RFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLIRQPKW 329
G F + + + D S + D E L
Sbjct: 238 VTHNFMGFFTDLDAFALAQDLDFASWDSYPLGFTDLMPLPPEEKLRYARTG 288
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 523 | |||
| d1tg7a5 | 354 | Beta-galactosidase LacA, N-terminal domain {Penici | 100.0 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 99.74 | |
| d2vzsa5 | 339 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 99.74 | |
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 99.73 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 99.64 | |
| d1bhga3 | 304 | beta-Glucuronidase, domain 3 {Human (Homo sapiens) | 99.54 | |
| d1jz8a5 | 292 | beta-Galactosidase, domain 3 {Escherichia coli [Ta | 99.51 | |
| d1qnra_ | 344 | Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | 99.5 | |
| d2c0ha1 | 350 | endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed | 99.42 | |
| d1yq2a5 | 297 | beta-Galactosidase, domain 3 {Arthrobacter sp. c2- | 99.35 | |
| d2je8a5 | 348 | Five-domain beta-mannosidase, domain 3 {Bacteroide | 99.32 | |
| d1bqca_ | 302 | Beta-mannanase {Thermomonospora fusca [TaxId: 2021 | 99.24 | |
| d1wkya2 | 297 | Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 | 99.14 | |
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 99.07 | |
| d1egza_ | 291 | Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: | 99.05 | |
| d1tvna1 | 293 | Endoglucanase Cel5a {Pseudoalteromonas haloplankti | 99.02 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 99.01 | |
| d1ceoa_ | 340 | Endoglucanase CelC {Clostridium thermocellum [TaxI | 99.01 | |
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 98.97 | |
| d7a3ha_ | 300 | Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId | 98.9 | |
| d1uhva2 | 346 | Beta-D-xylosidase, catalytic domain {Thermoanaerob | 98.89 | |
| d1hjsa_ | 332 | Beta-1,4-galactanase {Thielavia heterothallica, ak | 98.83 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 98.76 | |
| d1foba_ | 334 | Beta-1,4-galactanase {Fungus (Aspergillus aculeatu | 98.74 | |
| d1vjza_ | 325 | Endoglucanase homologue TM1752 {Thermotoga maritim | 98.73 | |
| d1fh9a_ | 312 | Xylanase A, catalytic core {Cellulomonas fimi [Tax | 98.66 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 98.62 | |
| d1vbua1 | 324 | Xylanase {Thermotoga maritima [TaxId: 2336]} | 98.51 | |
| d1h1na_ | 305 | Endocellulase EngI {Thermoascus aurantiacus [TaxId | 98.42 | |
| d1nq6a_ | 302 | Xylanase A, catalytic core {Streptomyces halstedii | 98.38 | |
| d1g01a_ | 357 | Alkaline cellulase K catalytic domain {Bacillus sp | 98.33 | |
| d1xyza_ | 320 | Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 | 98.27 | |
| d1ta3b_ | 301 | Xylanase A, catalytic core {Emericella nidulans (A | 98.25 | |
| d1v0la_ | 302 | Xylanase A, catalytic core {Streptomyces lividans | 98.17 | |
| d1n82a_ | 330 | Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId | 98.15 | |
| d1edga_ | 380 | Endoglucanase CelA {Clostridium cellulolyticum [Ta | 98.12 | |
| d1us3a2 | 364 | Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] | 98.03 | |
| d1i1wa_ | 303 | Xylanase A, catalytic core {Thermoascus aurantiacu | 98.01 | |
| d1b1ya_ | 500 | beta-Amylase {Barley (Hordeum vulgare) [TaxId: 451 | 97.95 | |
| d1fa2a_ | 498 | beta-Amylase {Sweet potato (Ipomoea batatas) [TaxI | 97.92 | |
| d1ur1a_ | 350 | Xylanase {Cellvibrio mixtus [TaxId: 39650]} | 97.84 | |
| d1wdpa1 | 490 | beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | 97.79 | |
| d1ug6a_ | 426 | Beta-glucosidase A {Thermus thermophilus [TaxId: 2 | 97.75 | |
| d2j78a1 | 443 | Beta-glucosidase A {Thermotoga maritima [TaxId: 23 | 97.72 | |
| d1r85a_ | 371 | Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: | 97.67 | |
| d1e4ia_ | 447 | Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 | 97.67 | |
| d1gnxa_ | 464 | Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] | 97.66 | |
| d1vffa1 | 423 | Beta-glucosidase A {Archaeon Pyrococcus horikoshii | 97.6 | |
| d1qoxa_ | 449 | Beta-glucosidase A {Bacillus circulans, subsp. alk | 97.56 | |
| d1wcga1 | 462 | Thioglucosidase {Cabbage aphid (Brevicoryne brassi | 97.37 | |
| d1cbga_ | 490 | Plant beta-glucosidase (myrosinase) {Creeping whit | 97.32 | |
| d1nofa2 | 277 | Glycosyl hydrolase family 5 xylanase, catalytic do | 97.24 | |
| d1v02a_ | 484 | Plant beta-glucosidase (myrosinase) {Sorghum bicol | 97.15 | |
| d1pbga_ | 468 | 6-phospho-beta-D-galactosidase, PGAL {Lactococcus | 97.04 | |
| d1w32a_ | 346 | Xylanase A, catalytic core {Pseudomonas fluorescen | 96.97 | |
| d1e4mm_ | 499 | Plant beta-glucosidase (myrosinase) {White mustard | 96.9 | |
| d1hl9a2 | 350 | Putative alpha-L-fucosidase, catalytic domain {The | 96.62 | |
| d1uwsa_ | 489 | beta-Glycosidase {Archaeon Sulfolobus solfataricus | 96.36 | |
| d1qvba_ | 481 | beta-Glycosidase {Archaeon Thermosphaera aggregans | 96.09 | |
| d1ud2a2 | 390 | Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta | 95.08 | |
| d1zy9a2 | 348 | Alpha-galactosidase GalA catalytic domain {Thermot | 94.38 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 92.56 | |
| d1bhga2 | 204 | beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9 | 92.48 | |
| d1ua7a2 | 344 | Bacterial alpha-amylase {Bacillus subtilis [TaxId: | 91.72 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 90.67 | |
| d1tg7a2 | 182 | Beta-galactosidase LacA, domains 4 and 5 {Penicill | 90.5 | |
| d1x7fa2 | 244 | Outer surface protein, N-terminal domain {Bacillus | 90.49 | |
| d1mxga2 | 361 | Bacterial alpha-amylase {Archaeon Pyrococcus woese | 90.42 | |
| d1yq2a3 | 216 | beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: | 90.31 | |
| d1ht6a2 | 347 | Plant alpha-amylase {Barley (Hordeum vulgare), AMY | 90.19 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 90.18 | |
| d2vzsa4 | 184 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 89.85 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 89.82 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 89.61 | |
| d1jaea2 | 378 | Animal alpha-amylase {Yellow mealworm (Tenebrio mo | 89.38 | |
| d1g94a2 | 354 | Bacterial alpha-amylase {Pseudoalteromonas halopla | 88.9 | |
| d2q02a1 | 271 | Putative cytoplasmic protein STM4435 {Salmonella t | 88.45 | |
| d1m7xa3 | 396 | 1,4-alpha-glucan branching enzyme, central domain | 88.35 | |
| d1jz8a3 | 207 | beta-Galactosidase {Escherichia coli [TaxId: 562]} | 88.21 | |
| d1bf2a3 | 475 | Isoamylase, central domain {Pseudomonas amyloderam | 88.11 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 88.07 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 87.65 | |
| d1gjwa2 | 572 | Maltosyltransferase {Thermotoga maritima [TaxId: 2 | 87.52 | |
| d1m53a2 | 478 | Isomaltulose synthase PalI {Klebsiella sp., lx3 [T | 86.85 | |
| d2guya2 | 381 | Fungal alpha-amylases {Aspergillus oryzae, Taka-am | 86.48 | |
| d3bmva4 | 406 | Cyclodextrin glycosyltransferase {Thermoanaerobact | 86.45 | |
| d2aaaa2 | 381 | Fungal alpha-amylases {Aspergillus niger, acid amy | 86.29 | |
| d1k77a_ | 260 | Hypothetical protein YgbM (EC1530) {Escherichia co | 85.68 | |
| d1uoka2 | 479 | Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 | 85.37 | |
| d1i60a_ | 278 | Hypothetical protein IolI {Bacillus subtilis [TaxI | 85.31 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 85.12 | |
| d1h3ga3 | 422 | Cyclomaltodextrinase, central domain {Flavobacteri | 84.99 | |
| d1lwha2 | 391 | 4-alpha-glucanotransferase {Thermotoga maritima [T | 84.04 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 83.64 | |
| d2je8a4 | 192 | Beta-mannosidase {Bacteroides thetaiotaomicron [Ta | 83.29 | |
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 81.69 | |
| d1hx0a2 | 403 | Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 | 81.34 |
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Probab=100.00 E-value=1.3e-74 Score=597.57 Aligned_cols=314 Identities=32% Similarity=0.505 Sum_probs=274.5
Q ss_pred CeeEEEecceEEECCEEEEEEEEEeeCCCCC-ccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHH
Q 009890 24 GANVTYDHRAVVIGGKRRVLISGSIHYPRST-PEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVK 102 (523)
Q Consensus 24 ~~~vt~d~~~l~idGk~~~l~sG~iHy~R~~-~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~ 102 (523)
+..|+||+++|+|||||++++||++||+|.+ |++|+++|++||++|+|+|+|||||+.|||+||+|||+|.+||++||+
T Consensus 3 ~~~v~~d~~~~~~~G~~~~~~~~~~h~~r~~~~~~w~~~l~~mk~~G~n~vr~~~~W~~~ep~~g~~df~~~~~l~~~l~ 82 (354)
T d1tg7a5 3 QKYVTWDEHSIFVNGERLMIFSGEVHPYRLPVASLYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFD 82 (354)
T ss_dssp CSSEEECSSCEEETTEEECEEEEECCGGGSCCGGGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHH
T ss_pred cceEEEeCCEEEECCEEEEEEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEEecchhccCCCCCcccccchhhHHHHHH
Confidence 4679999999999999999999999999985 799999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccc
Q 009890 103 LVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIEN 182 (523)
Q Consensus 103 la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIEN 182 (523)
+|+++||+||||+|||+|+||.+||+|.|+...++. +|+++|.|++++++|+++++++++ +++++++||||||||||
T Consensus 83 ~a~~~Gl~vil~~g~~~~~~w~~~~~p~~~~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~n~~~ii~wqi~N 159 (354)
T d1tg7a5 83 AAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVDGI-LRTSDEAYLKATDNYASNIAATIA--KAQITNGGPIILYQPEN 159 (354)
T ss_dssp HHHHHTCEEEEECCSCCCTTBGGGGCCGGGGGCSSC-TTSSCHHHHHHHHHHHHHHHHHHH--HTBGGGTSSEEEECCSS
T ss_pred HHHHcCCEEEEcCCCCcCcccccCCCCcccccCCCc-ccCCCHHHHHHHHHHHHHHHHHHH--HHHhccCCCceEEEecc
Confidence 999999999999999999999999999999987765 999999999999999999999999 66789999999999999
Q ss_pred cccccc-cccCcccHHHHHHHHHHHHhcCCCcceEEccCCC----CCCcccc---------CCCCcccCCCC--------
Q 009890 183 EYGNID-SAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSD----APDPIIN---------TCNGFYCDQFT-------- 240 (523)
Q Consensus 183 Eyg~~~-~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~~~~----~p~~vi~---------~~ng~~~~~~~-------- 240 (523)
|||... ...+.+.++|++||++++++.++++|+++|+... .+..++. .+.++.|..+.
T Consensus 160 E~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~d~yg~~~~~~~~~~~~~~~~~~~~~~ 239 (354)
T d1tg7a5 160 EYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGNLP 239 (354)
T ss_dssp CCCCBCTTCCCCSCHHHHHHHHHHHHHTTCCSCBBCCBSSSSCTTCTTSCTTCCSBCEEEECTTCSCCSCTTCCCTTCSC
T ss_pred ccCccccccccchHHHHHHHHHhhhhccCcccceEeccchhhccCCCCcccccccccccccCCCccccCCcccccccccc
Confidence 999764 2345678999999999999999999999998531 2222221 22333442211
Q ss_pred --------CCCCCCCceEeeeccccccccCCCCCCCCHHHHHHHHHHH-----HhcCCeeeeeeeeccCCCCCCCCCCCc
Q 009890 241 --------PNSNNKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARF-----FQRGGTFQNYYMYHGGTNFDRTSGGPF 307 (523)
Q Consensus 241 --------~~~~~~P~~~tE~~~Gwf~~wG~~~~~r~~~d~~~~~~~~-----~~~g~s~~nyYM~hGGTNfG~~~G~~~ 307 (523)
..+|.+|.+++|+++||++.||++...+++++++..+.++ ++.|++++||||+|||||||++ +++.
T Consensus 240 ~~~~~~~~~~~p~~p~~~~E~~~g~~~~wG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~YM~~GGTnfG~~-~~~~ 318 (354)
T d1tg7a5 240 TYFHTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLNLYMIFGGTNWGNL-GHPG 318 (354)
T ss_dssp CCHHHHHHHHCTTSCCEEEEEESSCCCCTTCCCHHHHHHHTSHHHHHHHHHHHHTTTCSEEEEECSBCCBCCTTC-BCTT
T ss_pred hHHHHHHhhcCCccceeeeccccccccccCCCccccCHHHHHHHHHHHHHhhhhhccccceEEeEEecccCCCCC-CCCC
Confidence 1257899999999999999999988777777665555444 5678899999999999999999 4667
Q ss_pred ccccccCCCCCCcCCCCCChhHHHHHHHHHHHHH
Q 009890 308 ISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKL 341 (523)
Q Consensus 308 ~~TSYDy~Api~E~G~~~~pKy~~lk~lh~~i~~ 341 (523)
.+|||||+|||+|+|+++.++|.++|.||+||+.
T Consensus 319 ~~tsYdy~api~e~G~~~~~yy~~~k~l~~~~~~ 352 (354)
T d1tg7a5 319 GYTSYDYGSAISESRNITREKYSELKLLGNFAKV 352 (354)
T ss_dssp SCSBCCTTCSBCTTCCCCSHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCeECcCCCCCHHHHHHHHHHHHHhcc
Confidence 8999999999999999987789999999999984
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Probab=99.74 E-value=1.5e-17 Score=161.91 Aligned_cols=153 Identities=17% Similarity=0.259 Sum_probs=115.7
Q ss_pred EEEEeeCCCCCccchHHHHHHHHhCCCCEEEEcc-ccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccc
Q 009890 44 ISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYV-FWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAE 122 (523)
Q Consensus 44 ~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYv-fWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aE 122 (523)
++.+.|+.-++++.|+++|+.||++|+|+|++.+ .|+.+||+||+|||+ .++++|+.|+++||.+||.+.++.+-+
T Consensus 2 ~~~~~~p~~~~~~~~~~D~~~~~~~G~n~vR~~i~~W~~iep~~G~~~~~---~~d~~i~~~~~~Gi~~iv~l~~~~~P~ 78 (393)
T d1kwga2 2 LGVCYYPEHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEWG---WLDEAIATLAAEGLKVVLGTPTATPPK 78 (393)
T ss_dssp EEEECCGGGSCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTTBCCCH---HHHHHHHHHHTTTCEEEEECSTTSCCH
T ss_pred cCcccCcccCCHHHHHHHHHHHHHcCCCEEEecccchhhcCCCCCccCHH---HHHHHHHHHHHCCCEEEEEcCCCCCch
Confidence 5666666667999999999999999999999998 699999999999998 899999999999999999998876544
Q ss_pred cCCCCCCccccCCC-C--------eeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccC-
Q 009890 123 WNFGGFPLWLHFIP-G--------IQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYG- 192 (523)
Q Consensus 123 w~~GG~P~WL~~~p-~--------i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g- 192 (523)
|-..-.|.|+.... + .....++|.+.+++.+++++++.+++. .++++.++++||.+.......
T Consensus 79 w~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ne~~~~~~~~~~ 151 (393)
T d1kwga2 79 WLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGG-------LEAVAGFQTDNEYGCHDTVRCY 151 (393)
T ss_dssp HHHHHCGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTT-------CTTEEEEECSSSTTTTTTSCCC
T ss_pred hhhccCcccccccCCCcccccccccccCCCCHHHHHHHHHHHHHHHHHhcC-------CceEEEEeecccccccCCcccc
Confidence 44333344433211 1 012246789999999999999999884 358999999999987543211
Q ss_pred --cccHHHHHHHHHHH
Q 009890 193 --AAGKSYIKWAAGMA 206 (523)
Q Consensus 193 --~~~~~y~~~l~~~~ 206 (523)
.....+..+++.++
T Consensus 152 ~~~~~~~~~~~~~~~~ 167 (393)
T d1kwga2 152 CPRCQEAFRGWLEARY 167 (393)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhh
Confidence 23344555555443
|
| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exochitosanase CsxA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.74 E-value=2.8e-17 Score=162.98 Aligned_cols=184 Identities=12% Similarity=0.108 Sum_probs=131.0
Q ss_pred EecceEEECCEEEEEEEEEee---CCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHH
Q 009890 29 YDHRAVVIGGKRRVLISGSIH---YPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVA 105 (523)
Q Consensus 29 ~d~~~l~idGk~~~l~sG~iH---y~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~ 105 (523)
.+++.|+|||||+++.++++| +.+.+++.|+++|++||++|+|+||++ ...| + +.|+++|.
T Consensus 9 ~~g~~f~vNG~~~~~rG~~~~p~~~~~~~~~~~~~~l~~~k~~G~N~iR~~---~~~~--~-----------~~f~d~~D 72 (339)
T d2vzsa5 9 SGGRQYSVNGKPLLIRGGGYTPDLFLRWNETAAADKLKYVLNLGLNTVRLE---GHIE--P-----------DEFFDIAD 72 (339)
T ss_dssp TSCEEEEETTEEECEEEEECCCCTTCCCCHHHHHHHHHHHHHTTCCEEEEE---SCCC--C-----------HHHHHHHH
T ss_pred CCCcEEEECCEEEEEeccccCCCcCCCCCHHHHHHHHHHHHHcCCCEEEec---CCCC--C-----------HHHHHHHH
Confidence 347889999999999999998 466799999999999999999999994 3333 2 67999999
Q ss_pred HcCCEEEEecCceeccccCCCCCCccccCCC-CeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccc
Q 009890 106 EAGLYAHLRIGPYVCAEWNFGGFPLWLHFIP-GIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEY 184 (523)
Q Consensus 106 ~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p-~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEy 184 (523)
++||+|+.-+ ...+.|+...+ ....+..+|.|++.+++-+++++++.+.| +.||+|||.||+
T Consensus 73 ~~Gi~V~~e~----------~~~~~w~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~r~rnH-------Psvi~W~~gNE~ 135 (339)
T d2vzsa5 73 DLGVLTMPGW----------ECCDKWEGQVNGEEKGEPWVESDYPIAKASMFSEAERLRDH-------PSVISFHIGSDF 135 (339)
T ss_dssp HHTCEEEEEC----------CSSSGGGTTTSTTSSSCCCCTTHHHHHHHHHHHHHHHHTTC-------TTBCCEESCSSS
T ss_pred HCCCeEeccc----------ccCccccccCCcccccCCCCHHHHHHHHHHHHHHHHHhcCC-------CcEEEEecCcCC
Confidence 9999998643 23566765432 22345678999999888888888888755 489999999998
Q ss_pred cccccccCcccHHHHHHHHHHHHhcCCCcceEEccCCCCCCcc-----cc----C---CCCcccCCCCCCCCCCCceEee
Q 009890 185 GNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDPI-----IN----T---CNGFYCDQFTPNSNNKPKMWTE 252 (523)
Q Consensus 185 g~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~~~~~p~~v-----i~----~---~ng~~~~~~~~~~~~~P~~~tE 252 (523)
+. .....+++.+.+++++...|++..... .+.+. .. . ..+.+++.+....+..|.+.+|
T Consensus 136 ~~--------~~~~~~~~~~~~~~~D~~r~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~se 206 (339)
T d2vzsa5 136 AP--------DRRIEQGYLDAMKAADFLLPVIPAASA-RPSPITGASGMKMNGPYDYVPPVYWYDKSQKDRGGAWSFNSE 206 (339)
T ss_dssp CC--------CHHHHHHHHHHHHHTTCCSCEESCSSS-CCCSSSCCCCEECCCCCSCCCGGGGGCCSCTTSCSSSEEEEE
T ss_pred Cc--------hHHHHHHHHHHHHHhCCCceeEecCCC-CCCCcccccCcccCCcccccccccccCcchhhcCCCcccccc
Confidence 64 345666777777777777775432211 11110 00 0 0111223444566778889998
Q ss_pred ec
Q 009890 253 NW 254 (523)
Q Consensus 253 ~~ 254 (523)
+.
T Consensus 207 ~g 208 (339)
T d2vzsa5 207 TS 208 (339)
T ss_dssp EC
T ss_pred cc
Confidence 64
|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Probab=99.73 E-value=3.8e-18 Score=168.92 Aligned_cols=193 Identities=14% Similarity=0.017 Sum_probs=144.4
Q ss_pred eEEEecceEEECCEEEEEEEEEeeCC------CCCccchHHHHHHHHhCCCCEEEEccc----cCcCCCCCceeeccCcc
Q 009890 26 NVTYDHRAVVIGGKRRVLISGSIHYP------RSTPEMWPDLIQKSKDGGLDVIETYVF----WNLHEPVRNQYNFEGRY 95 (523)
Q Consensus 26 ~vt~d~~~l~idGk~~~l~sG~iHy~------R~~~~~W~d~l~k~Ka~GlN~V~tYvf----Wn~HEp~~G~ydF~G~~ 95 (523)
-|+.+++.|++||+|+++.+...|+. ..+.+.+++.|++||++|+|+||+|++ |...+|.||.+|.++-+
T Consensus 3 ~v~~~g~~f~~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~vR~~~~~~~~~~~~~~~~g~~~~~~l~ 82 (370)
T d1rh9a1 3 FVYTDGTHFALNGKSLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQ 82 (370)
T ss_dssp CCEEETTEEEETTEEECEEEEECTTHHHHHHSTTTTHHHHHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHHH
T ss_pred cEEEECCEEEECCEEEEEEEEecccCcccccCCCCHHHHHHHHHHHHHCCCeEEEECCccCccCcccCCCCCcccHHHHH
Confidence 37899999999999999999988874 457788999999999999999999876 66678899999999999
Q ss_pred hHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCC----eeeecCChhHHHHHHHHHHHHHHHHHhc-ccccc
Q 009890 96 DLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPG----IQFRTDNEPFKAEMQRFTAKIVDMMKQE-KLYAS 170 (523)
Q Consensus 96 dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~----i~~Rt~d~~fl~~~~~~~~~i~~~ik~~-~l~~~ 170 (523)
.|++||++|+++||+||+.+.++....+...+.+.|...... ...-..||..++...++++.+++++... ...++
T Consensus 83 ~ld~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~~~~~~~~~ 162 (370)
T d1rh9a1 83 GLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYK 162 (370)
T ss_dssp HHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHHHHTTCCCCCGGGGGTCHHHHHHHHHHHHHHHHCBCTTTCSBGG
T ss_pred HHHHHHHHHHHcCCEEEEecccccccccCCcccccccccCCCcCCccccccCCHHHHHHHHHHHHHHHHhhhhhhHhhhc
Confidence 999999999999999999998776554444445556543211 1122357888888888888887765321 12346
Q ss_pred cCCceEeccccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEc
Q 009890 171 QGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMC 218 (523)
Q Consensus 171 ~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~ 218 (523)
+...|+++|+.||.......-...-+++.+.+.+..++.+...+++..
T Consensus 163 ~~~~v~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~dp~~~v~~~ 210 (370)
T d1rh9a1 163 DDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIG 210 (370)
T ss_dssp GCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHHHHCCSSEEECC
T ss_pred CCceeeeeccccccccCCccchHHHHHHHHHHHHHHHhhCCCCeEEEe
Confidence 778999999999985432211123345666677777777877766543
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Probab=99.64 E-value=3e-15 Score=148.55 Aligned_cols=193 Identities=13% Similarity=0.048 Sum_probs=130.9
Q ss_pred eEEEecceEEECCEEEEEEEEEeeCC--------CCCccchHHHHHHHHhCCCCEEEEccccC----------cCCCCCc
Q 009890 26 NVTYDHRAVVIGGKRRVLISGSIHYP--------RSTPEMWPDLIQKSKDGGLDVIETYVFWN----------LHEPVRN 87 (523)
Q Consensus 26 ~vt~d~~~l~idGk~~~l~sG~iHy~--------R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn----------~HEp~~G 87 (523)
-|+.+++.|.+||+|+++.+...|+. ..+++.++++|++||++|+|+||++++|+ ..+|.+|
T Consensus 3 ~v~~~g~~f~~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~iR~~~~~~~~~~~~~~~~~~~~~~g 82 (410)
T d1uuqa_ 3 FVRVNGGHFELQGKPYVITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFG 82 (410)
T ss_dssp CCEEETTEEEETTEEECEEEEECTTHHHHTCSSTTCCHHHHHHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSSTT
T ss_pred CEEEECCEEEECCEEEEEEEEecCCcccccccCCCCCHHHHHHHHHHHHHCCCcEEEeCCcccccccccccCCCcccccc
Confidence 48899999999999999999998752 23678889999999999999999988754 5688999
Q ss_pred eeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCC-eeee--------------cCChhHHHHHH
Q 009890 88 QYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPG-IQFR--------------TDNEPFKAEMQ 152 (523)
Q Consensus 88 ~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~-i~~R--------------t~d~~fl~~~~ 152 (523)
+||-.|-..+++||++|+++||+|++.+--+....+.....|.|...... ...+ ..++...+...
T Consensus 83 ~~de~gl~~~d~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (410)
T d1uuqa_ 83 NYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEYR 162 (410)
T ss_dssp CBCHHHHHHHHHHHHHHHHTTCEEEEECCBSSSTTCHHHHHHHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHcCCeeEEeccccccccCCcccccccccCCCcCccccccccccccccccccccCHHHHHHHH
Confidence 99998888999999999999999999985332221111123455543221 0000 12344445555
Q ss_pred HHHHHHHHHHHhc-ccccccCCceEeccccccccccccccC----cccHHHHHHHHHHHHhcCCCcceEEc
Q 009890 153 RFTAKIVDMMKQE-KLYASQGGPIILSQIENEYGNIDSAYG----AAGKSYIKWAAGMALSLDTGVPWVMC 218 (523)
Q Consensus 153 ~~~~~i~~~ik~~-~l~~~~gGpII~~QIENEyg~~~~~~g----~~~~~y~~~l~~~~~~~g~~vP~~~~ 218 (523)
.++++++++.... ....++...|++++|.||........+ .....+++.+.+..+..+...|++..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~p~i~~~~l~NE~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dp~~~v~~~ 233 (410)
T d1uuqa_ 163 KTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWVHAAAAYIKTLDAHHLVSSG 233 (410)
T ss_dssp HHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCCSCSTTCCHHHHHHHHHHHHHHHHHHHHHCSSSEEECC
T ss_pred HHHHHHHHhhhhhhhHhhcCChhHhhhhhccccCCccCcccccchhhhhHHHHHHHhhhhhcCCCceEeec
Confidence 5555554432111 112356789999999999865432211 12235567777777777777766543
|
| >d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Glucuronidase, domain 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=5.6e-13 Score=129.34 Aligned_cols=150 Identities=15% Similarity=0.110 Sum_probs=117.7
Q ss_pred EEEecceEEECCEEEEEEEEEeeCCC------CCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHH
Q 009890 27 VTYDHRAVVIGGKRRVLISGSIHYPR------STPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKF 100 (523)
Q Consensus 27 vt~d~~~l~idGk~~~l~sG~iHy~R------~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~f 100 (523)
|+++++.|+|||||+++.++..|++. .+++.++++|++||++|+|+||++ |-|.. +.|
T Consensus 1 v~v~~~~f~lNG~~~~lrG~~~~~~~~~~g~~~~~~~~~~d~~~~k~~G~N~iR~~-----~~~~~-----------~~~ 64 (304)
T d1bhga3 1 VAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTS-----HYPYA-----------EEV 64 (304)
T ss_dssp EEECSSCEEETTEECCEEEEECCSCBTTTBTCCCHHHHHHHHHHHHHHTCCEEECT-----TSCCS-----------STH
T ss_pred CEEECCEEEECCEEEEEEeEEcCCCCCccCCCCCHHHHHHHHHHHHHcCCCEEEec-----CCCCh-----------HHH
Confidence 78899999999999999999998643 378899999999999999999983 33321 368
Q ss_pred HHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccc
Q 009890 101 VKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQI 180 (523)
Q Consensus 101 l~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QI 180 (523)
+++|.+.||.|+.-. |.|-...+ ...++.+++...+.++++++.++.|| .||+|-|
T Consensus 65 ~~~cD~~Gilv~~e~-------------~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~rnhP-------sI~~w~~ 120 (304)
T d1bhga3 65 MQMCDRYGIVVIDEC-------------PGVGLALP----QFFNNVSLHHHMQVMEEVVRRDKNHP-------AVVMWSV 120 (304)
T ss_dssp HHHHSTTCCEEEECC-------------SCCCTTSS----GGGSHHHHHHHHHHHHHHHHHHTTCS-------SEEEEEE
T ss_pred HHHHHhcCCeeeecc-------------cccccccc----cccchHHHHHHHHHHHHHHHHhcCCC-------cHHHhcc
Confidence 999999999998753 22222111 23578899999999999999888665 8999999
Q ss_pred cccccccccccCcccHHHHHHHHHHHHhcCCCcceEEccC
Q 009890 181 ENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQ 220 (523)
Q Consensus 181 ENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~~ 220 (523)
.||.+... .....+++.+.+++++++-+.|+.....
T Consensus 121 ~NE~~~~~----~~~~~~~~~~~~~ik~~Dptrpv~~~~~ 156 (304)
T d1bhga3 121 ANEPASHL----ESAGYYLKMVIAHTKSLDPSRPVTFVSN 156 (304)
T ss_dssp EESCCTTS----HHHHHHHHHHHHHHHTTCCSSCEEEEBC
T ss_pred CCCCCccc----chhhhhhHHHHHHHHhhCCCCceeeecc
Confidence 99976522 2345788888899999998888776543
|
| >d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Galactosidase, domain 3 species: Escherichia coli [TaxId: 562]
Probab=99.51 E-value=1.3e-12 Score=127.40 Aligned_cols=150 Identities=15% Similarity=0.142 Sum_probs=116.1
Q ss_pred eEEEecceEEECCEEEEEEEEEeeCCC------CCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHH
Q 009890 26 NVTYDHRAVVIGGKRRVLISGSIHYPR------STPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVK 99 (523)
Q Consensus 26 ~vt~d~~~l~idGk~~~l~sG~iHy~R------~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~ 99 (523)
.|+.++..|+|||||++|.+...|... .+++.++.+|++||++|+|+||++. -|.. ..
T Consensus 1 ~v~i~~~~f~lNGk~~~l~G~~~~~~~~~~g~~~~~~~~~~di~l~k~~G~N~iR~~~-----~p~~-----------~~ 64 (292)
T d1jz8a5 1 EVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSH-----YPNH-----------PL 64 (292)
T ss_dssp CEEEETTEEEETTEECCEEEEECCCCBTTTBTCCCHHHHHHHHHHHHHTTCCEEECTT-----SCCC-----------HH
T ss_pred CEEEECCEEEECCEEEEEeeeEccCCCCccCCCCCHHHHHHHHHHHHhcCCCEEEecC-----CCCh-----------HH
Confidence 378999999999999999999988632 5888999999999999999999954 3332 67
Q ss_pred HHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecc
Q 009890 100 FVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQ 179 (523)
Q Consensus 100 fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~Q 179 (523)
|+++|.++||.|+.-+ | .|-...+....-.++|.+++...+-+++++++.+.|| .||+|-
T Consensus 65 ~~~~~D~~Gilv~~e~-~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~nHP-------Svi~W~ 124 (292)
T d1jz8a5 65 WYTLCDRYGLYVVDEA-N------------IETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHP-------SVIIWS 124 (292)
T ss_dssp HHHHHHHHTCEEEEEC-S------------CBCTTSSSTTTTTTCGGGHHHHHHHHHHHHHHHTTCT-------TEEEEE
T ss_pred HHHHHhhcCCeEEeee-e------------ecccCCcccCCCCCCHHHHHHHHHHHHHHHHHccCCC-------cHHHhc
Confidence 9999999999999876 2 1111111112334788899998888888888888665 899999
Q ss_pred ccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEccC
Q 009890 180 IENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQ 220 (523)
Q Consensus 180 IENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~~ 220 (523)
+-||... ..+...+.+.++++.-.-|...+..
T Consensus 125 ~~NE~~~---------~~~~~~~~~~~~~~d~~r~~~~~~~ 156 (292)
T d1jz8a5 125 LGNESGH---------GANHDALYRWIKSVDPSRPVQYEGG 156 (292)
T ss_dssp CCSSCCC---------CHHHHHHHHHHHHHCTTSCEECCTT
T ss_pred ccccCCc---------chhhHHHHHHHHHHhhcCccccccc
Confidence 9999753 2455566677777888888887765
|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Trichoderma reesei [TaxId: 51453]
Probab=99.50 E-value=2.9e-14 Score=140.47 Aligned_cols=180 Identities=14% Similarity=0.090 Sum_probs=126.1
Q ss_pred eEEEecceEEECCEEEEEEEEEeeCCC--CCccchHHHHHHHHhCCCCEEEEcccc-CcCCCCCce--------------
Q 009890 26 NVTYDHRAVVIGGKRRVLISGSIHYPR--STPEMWPDLIQKSKDGGLDVIETYVFW-NLHEPVRNQ-------------- 88 (523)
Q Consensus 26 ~vt~d~~~l~idGk~~~l~sG~iHy~R--~~~~~W~d~l~k~Ka~GlN~V~tYvfW-n~HEp~~G~-------------- 88 (523)
-|+.++..|++||+|+++.+...|+.. ..++.+++.|+.||++|+|+||++++. -..++.++.
T Consensus 4 ~v~~~g~~f~~nG~p~~~~G~N~~~~~~~~~~~~~~~~l~~~~~~G~N~iR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (344)
T d1qnra_ 4 FVTISGTQFNIDGKVGYFAGTNCYWCSFLTNHADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTIN 83 (344)
T ss_dssp CCEEETTEEEETTEESCEEEEECGGGGGCCCHHHHHHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEEC
T ss_pred cEEEECCEEEECCEEEEEEEEccCCCCcCCCHHHHHHHHHHHHhcCCCEEEECCcccccccCCCCccchhhcccccCccc
Confidence 389999999999999999888877533 467899999999999999999998753 222333333
Q ss_pred eeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCC---ccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhc
Q 009890 89 YNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFP---LWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQE 165 (523)
Q Consensus 89 ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P---~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~ 165 (523)
++-++-..|++++++|+++||+|++.+-.+.+ ..+|.+ .|..... ....+++.++++..++++.+++++|.+
T Consensus 84 ~~~~~~~~ld~~~~~a~~~Gi~vi~~l~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~~~ 158 (344)
T d1qnra_ 84 TGADGLQTLDYVVQSAEQHNLKLIIPFVNNWS---DYGGINAYVNAFGGNA--TTWYTNTAAQTQYRKYVQAVVSRYANS 158 (344)
T ss_dssp CSTTTTHHHHHHHHHHHHHTCEEEEESCBSSS---TTSHHHHHHHHHCSCT--TGGGGCHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHHHHcCCeeEeeccCCcc---cccccccccccccccc--ccccCCHHHHHHHHHHHHHHHHHhCCC
Confidence 33334457999999999999999988632111 111111 1211111 122457888899999999999998865
Q ss_pred ccccccCCceEeccccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEc
Q 009890 166 KLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMC 218 (523)
Q Consensus 166 ~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~ 218 (523)
+ .||+++|-||...... .......+.+.+.+.+++.+...++++.
T Consensus 159 p-------~v~~~~l~NEp~~~~~-~~~~~~~~~~~~~~~ir~~d~~~~v~~~ 203 (344)
T d1qnra_ 159 T-------AIFAWELGNEPRCNGC-STDVIVQWATSVSQYVKSLDSNHLVTLG 203 (344)
T ss_dssp T-------TEEEEESCBSCCCTTC-CTHHHHHHHHHHHHHHHHHCSSSEEECC
T ss_pred C-------ceeeeccCCccCCCCC-chhhhhHHHHHHHHHHHhhCCCCEEEEc
Confidence 4 7999999999865321 1123456677777788888887766553
|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: endo-1,4-beta-mannosidase species: Blue mussel (Mytilus edulis) [TaxId: 6550]
Probab=99.42 E-value=3.8e-13 Score=129.98 Aligned_cols=144 Identities=8% Similarity=0.062 Sum_probs=106.8
Q ss_pred eEEEecceEEECCEEEEEEEEEeeCCCC----C-------ccchHHHHHHHHhCCCCEEEEccccCcCC-------CCCc
Q 009890 26 NVTYDHRAVVIGGKRRVLISGSIHYPRS----T-------PEMWPDLIQKSKDGGLDVIETYVFWNLHE-------PVRN 87 (523)
Q Consensus 26 ~vt~d~~~l~idGk~~~l~sG~iHy~R~----~-------~~~W~d~l~k~Ka~GlN~V~tYvfWn~HE-------p~~G 87 (523)
+|+.++..|.+||||+++.+..+|+... . ++..+++|+.||++|+|+||+.++|..+. +.++
T Consensus 1 ~~~~~g~~f~~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~N~vRv~~~~~~~~~~~~~~~~~~~ 80 (350)
T d2c0ha1 1 RLSVSGTNLNYNGHHIFLSGANQAWVNYARDFGHNQYSKGKSTFESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVT 80 (350)
T ss_dssp CEEEETTEEEETTEEECEEEEECCCSSTTCSSSTTCHHHHHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEE
T ss_pred CEEEECCEEEECCEEEEEEEEecCCcccccccCcccCCCCHHHHHHHHHHHHHcCCCEEEECcccCccCCcccccCCCCC
Confidence 4789999999999999999999985432 2 33456789999999999999999887543 3455
Q ss_pred eeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhccc
Q 009890 88 QYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKL 167 (523)
Q Consensus 88 ~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l 167 (523)
.++.+....+++|+++|+++||+|++-+ +.-+.. .+.+-... ..-.+++.+++++..+++.|+++++.++
T Consensus 81 ~~~~~~~~~~d~~~~~a~~~gi~vi~d~----~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~r~~~~p- 150 (350)
T d2c0ha1 81 GIDNTLISDMRAYLHAAQRHNILIFFTL----WNGAVK--QSTHYRLN---GLMVDTRKLQSYIDHALKPMANALKNEK- 150 (350)
T ss_dssp ECCTTHHHHHHHHHHHHHHTTCEEEEEE----EECSCC--CTTHHHHH---HHHHCHHHHHHHHHHTHHHHHHHHTTCT-
T ss_pred ccChhhhHHHHHHHHHHHHCCCEEEEEe----cccccc--CCCCcccC---cccCCCHHHHHHHHHHHHHHHHHhCCCC-
Confidence 6677777789999999999999999875 111100 00000000 1123567778888889999999988654
Q ss_pred ccccCCceEecccccccc
Q 009890 168 YASQGGPIILSQIENEYG 185 (523)
Q Consensus 168 ~~~~gGpII~~QIENEyg 185 (523)
.|++|+|-||..
T Consensus 151 ------sv~~~~l~NEp~ 162 (350)
T d2c0ha1 151 ------ALGGWDIMNEPE 162 (350)
T ss_dssp ------TEEEEEEEECGG
T ss_pred ------CEEEEEEecccc
Confidence 899999999964
|
| >d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Galactosidase, domain 3 species: Arthrobacter sp. c2-2 [TaxId: 192168]
Probab=99.35 E-value=9.8e-12 Score=121.97 Aligned_cols=150 Identities=18% Similarity=0.179 Sum_probs=114.8
Q ss_pred EEEecceEEECCEEEEEEEEEeeCCC------CCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHH
Q 009890 27 VTYDHRAVVIGGKRRVLISGSIHYPR------STPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKF 100 (523)
Q Consensus 27 vt~d~~~l~idGk~~~l~sG~iHy~R------~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~f 100 (523)
|+++++.|+|||||++|.+...|... .+++.|+.+|+.||++|+|+||+ .|-|.. .+|
T Consensus 1 i~v~g~~f~LNGk~~~l~Gv~~h~~~p~~G~a~~~~~~~~di~l~k~~G~N~iR~-----~h~p~~-----------~~~ 64 (297)
T d1yq2a5 1 VRIVGDQFLVNGRRVVFHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRT-----SHYPPH-----------PRL 64 (297)
T ss_dssp EEEETTEEEETTEECCEEEEEECCCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEE-----TTSCCC-----------HHH
T ss_pred CEEECCEEEECCEEEEEeeeEcCCcCcccCcCCCHHHHHHHHHHHHHCCCCEEEc-----cCCCCh-----------HHH
Confidence 68899999999999999999998422 48889999999999999999999 566644 789
Q ss_pred HHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccc
Q 009890 101 VKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQI 180 (523)
Q Consensus 101 l~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QI 180 (523)
+++|.+.||+|+..+. ..+ .......|. ..-++++.|++..++-+++++++.+.|| .||+|-|
T Consensus 65 ~d~cD~~Gilv~~e~~-~~~---~~~~~~~~~------~~~~~~~~~~~~~~~~~~emV~r~~NHP-------SIi~W~~ 127 (297)
T d1yq2a5 65 LDLADEMGFWVILECD-LET---HGFEAGGWV------ENPSDVPAWRDALVDRMERTVERDKNHP-------SIVMWSL 127 (297)
T ss_dssp HHHHHHHTCEEEEECS-CBC---GGGTTTTTT------TCGGGCGGGHHHHHHHHHHHHHHHTTCT-------TEEEEEC
T ss_pred HHHHHhcCCEEEEeec-ccc---ccccccCcc------CCccccHHHHHHHHHHHHHHHHHhCCCC-------ceEeecc
Confidence 9999999999998762 111 111111111 1234678888888888888888888665 8999999
Q ss_pred cccccccccccCcccHHHHHHHHHHHHhcCCCcceEEc
Q 009890 181 ENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMC 218 (523)
Q Consensus 181 ENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~ 218 (523)
-||-.. ....+.+.+++++++-+-|....
T Consensus 128 gNE~~~---------~~~~~~~~~~~k~~D~tRp~~~~ 156 (297)
T d1yq2a5 128 GNESGT---------GSNLAAMAAWAHARDSSRPVHYE 156 (297)
T ss_dssp CSSCCC---------CHHHHHHHHHHHHHCTTSCEECT
T ss_pred cccCCc---------hHHHHHHHHHHHHhccCCccccc
Confidence 999643 24567788888888888887543
|
| >d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Five-domain beta-mannosidase, domain 3 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.32 E-value=1.8e-11 Score=119.90 Aligned_cols=112 Identities=12% Similarity=0.147 Sum_probs=89.2
Q ss_pred EEECCEEEEEEEEEeeCC-----CCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcC
Q 009890 34 VVIGGKRRVLISGSIHYP-----RSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAG 108 (523)
Q Consensus 34 l~idGk~~~l~sG~iHy~-----R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~G 108 (523)
|+|||+|++|.++..|.+ +.+++..+++|++||++|+|+||+|. .|-|.+ ..|+++|.+.|
T Consensus 18 f~lNG~p~~lrG~~~~~~~~~~~~~~~e~~~~di~l~ke~G~N~IR~~~---~~~~p~-----------~~f~d~cD~~G 83 (348)
T d2je8a5 18 FEVNGIPMFAKGANYIPQDALLPNVTTERYQTLFRDMKEANMNMVRIWG---GGTYEN-----------NLFYDLADENG 83 (348)
T ss_dssp EEETTEEECEEEEEECCSCSSGGGCCHHHHHHHHHHHHHTTCCEEEECT---TSCCCC-----------HHHHHHHHHHT
T ss_pred EEECCEEEEEeeEecCCCCCCCCCCCHHHHHHHHHHHHHcCCCEEecCC---CCCCCC-----------HHHHHHHHHCC
Confidence 999999999999998864 35899999999999999999999965 333333 78999999999
Q ss_pred CEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccc
Q 009890 109 LYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185 (523)
Q Consensus 109 L~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg 185 (523)
|.|+.-+ |+.+ . ....++.+.+.+++-++.++.+.+.|| .||+|.+-||..
T Consensus 84 ilV~~e~-~~~~------------~------~~~~~~~~~~~~~~~~~~~I~r~rNHP-------SIi~W~~gnE~~ 134 (348)
T d2je8a5 84 ILVWQDF-MFAC------------T------PYPSDPTFLKRVEAEAVYNIRRLRNHA-------SLAMWCGNNEIL 134 (348)
T ss_dssp CEEEEEC-SCBS------------S------CCCCCHHHHHHHHHHHHHHHHHHTTCT-------TEEEEESCBSHH
T ss_pred CEEEecc-chhc------------c------CCCCCHHHHHHHHHHHHHHHHHhcCCC-------eEEEEeccCccc
Confidence 9998775 2221 0 112567888888887788877777654 899999999975
|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Thermomonospora fusca [TaxId: 2021]
Probab=99.24 E-value=1.2e-11 Score=120.50 Aligned_cols=159 Identities=13% Similarity=0.089 Sum_probs=116.4
Q ss_pred eEEEecceEE-ECCEEEEEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHH
Q 009890 26 NVTYDHRAVV-IGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLV 104 (523)
Q Consensus 26 ~vt~d~~~l~-idGk~~~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la 104 (523)
.+..+++.|+ .||||+++-+...|..-.+.. .+.|+.||++|+|+||+.+.|..+.+. ++...+++++++|
T Consensus 3 ~l~v~g~~i~d~nG~~~~lrGvn~~~~~~~~~--~~~~~~i~~~G~N~VRl~~~~~~~~~~------~~~~~~~~~v~~a 74 (302)
T d1bqca_ 3 GLHVKNGRLYEANGQEFIIRGVSHPHNWYPQH--TQAFADIKSHGANTVRVVLSNGVRWSK------NGPSDVANVISLC 74 (302)
T ss_dssp CSEEETTEEECTTSCBCCCEEEEECTTTCTTC--TTHHHHHHHTTCSEEEEEECCSSSSCC------CCHHHHHHHHHHH
T ss_pred cEEEeCCEEECCCCCEEEEEEeecCcccccch--HHHHHHHHhcCCCEEEEecccccccCc------chHHHHHHHHHHH
Confidence 4568888988 899999999999886444433 456999999999999999987654433 3446899999999
Q ss_pred HHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccc
Q 009890 105 AEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEY 184 (523)
Q Consensus 105 ~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEy 184 (523)
.++||+|||.. +..+.. . -.+++.+.+....++++|++++|.++ .|+++.|-||.
T Consensus 75 ~~~Gi~vildl----h~~~~~---~-----------~~~~~~~~~~~~~~w~~ia~~~~~~p-------~vv~~~l~NEp 129 (302)
T d1bqca_ 75 KQNRLICMLEV----HDTTGY---G-----------EQSGASTLDQAVDYWIELKSVLQGEE-------DYVLINIGNEP 129 (302)
T ss_dssp HHTTCEEEEEE----GGGTTT---T-----------TSTTCCCHHHHHHHHHHTHHHHTTCT-------TTEEEECSSSC
T ss_pred HHCCCEEEEEe----cccccc---c-----------CCCchHHHHHHHHHHHHHHHHhcCCC-------CEEEEeccccc
Confidence 99999999987 211110 0 01345566778888889999888553 79999999998
Q ss_pred cccccccCcccHHHHHHHHHHHHhcCCCcceEE
Q 009890 185 GNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVM 217 (523)
Q Consensus 185 g~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~ 217 (523)
..........-..+++.+.+.+++.+...|++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~ir~~d~~~~i~v 162 (302)
T d1bqca_ 130 YGNDSATVAAWATDTSAAIQRLRAAGFEHTLVV 162 (302)
T ss_dssp CCSCHHHHTTHHHHHHHHHHHHHHTTCCSCEEE
T ss_pred cCCCCcchhhhHHHHHHHHHHHHHcCCCcEEEE
Confidence 532211112345677888888899988887665
|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Bacillus sp. JAMB-602 [TaxId: 244966]
Probab=99.14 E-value=9.5e-11 Score=113.64 Aligned_cols=156 Identities=13% Similarity=0.063 Sum_probs=115.8
Q ss_pred EEEecceEE-ECCEEEEEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHH
Q 009890 27 VTYDHRAVV-IGGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVA 105 (523)
Q Consensus 27 vt~d~~~l~-idGk~~~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~ 105 (523)
+..+++.|+ .||||+++.+.. |...+.++..+++|+.||+.|+|+||+++.|. +.|+-++-..|+++|++|.
T Consensus 3 l~v~G~~ivd~nG~~~~l~Gvn-~~~~~~~~~~~~d~~~~~~~G~N~VRl~~~~~------~~~~~~~~~~ld~~v~~a~ 75 (297)
T d1wkya2 3 FYVSGTTLYDANGNPFVMRGIN-HGHAWYKDQATTAIEGIANTGANTVRIVLSDG------GQWTKDDIQTVRNLISLAE 75 (297)
T ss_dssp CEEETTEEECTTSCBCCCEEEE-ECGGGCGGGHHHHHHHHHTTTCSEEEEEECCS------SSSCCCCHHHHHHHHHHHH
T ss_pred eEEECCEEECCCCCEEEEEEec-cCcccCchHHHHHHHHHHHCCCcEEEEeccCC------CccCccHHHHHHHHHHHHH
Confidence 456777776 589999998765 43345677889999999999999999999775 3455555668999999999
Q ss_pred HcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccc
Q 009890 106 EAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185 (523)
Q Consensus 106 ~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg 185 (523)
++||+|||-+- .. ++ ..+....++..++++++++++|.+ ..|+++.|-||..
T Consensus 76 ~~Gi~vildlh----------~~-------~~----~~~~~~~~~~~~~w~~~a~~~~~~-------p~v~~~~l~NEp~ 127 (297)
T d1wkya2 76 DNNLVAVLEVH----------DA-------TG----YDSIASLNRAVDYWIEMRSALIGK-------EDTVIINIANEWF 127 (297)
T ss_dssp HTTCEEEEEEC----------TT-------TT----CCCHHHHHHHHHHHHHTGGGTTTC-------TTTEEEECCTTCC
T ss_pred HCCCceEeecc----------cc-------cc----ccccccHHHHHHHHHHHHHHhcCC-------CCEEEEecccccc
Confidence 99999999862 01 11 134456677777788887777644 4799999999974
Q ss_pred ccccccCcccHHHHHHHHHHHHhcCCCcceEEcc
Q 009890 186 NIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQ 219 (523)
Q Consensus 186 ~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~ 219 (523)
.... .+.-..+.+.+.+..|+.+...|+++..
T Consensus 128 ~~~~--~~~~~~~~~~~~~~IR~~d~~~~I~v~~ 159 (297)
T d1wkya2 128 GSWD--GAAWADGYKQAIPRLRNAGLNNTLMIDA 159 (297)
T ss_dssp CSSC--HHHHHHHHHHHHHHHHHTTCCSCEEEEC
T ss_pred ccch--hhhhhhhhhhhHHHHHhcCCCceEEEec
Confidence 3211 1234578888899999999998877643
|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Probab=99.07 E-value=4.9e-10 Score=114.71 Aligned_cols=148 Identities=9% Similarity=0.016 Sum_probs=106.4
Q ss_pred HHHHHHHHhCCCCEEEEccccCcCCCCCce-eeccCcchHHHHHHHHHHcCCEEEEecCce--eccccCCCCCCccccCC
Q 009890 59 PDLIQKSKDGGLDVIETYVFWNLHEPVRNQ-YNFEGRYDLVKFVKLVAEAGLYAHLRIGPY--VCAEWNFGGFPLWLHFI 135 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~-ydF~G~~dL~~fl~la~~~GL~Vilr~GPy--i~aEw~~GG~P~WL~~~ 135 (523)
++++++||++|+|+||+.|.|...++.++. |+-.+...|+++|+.|+++||+|||..-.. -...++.+|..
T Consensus 71 ~~D~~~i~~~G~N~VRiPv~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~gl~VilDlH~~pg~~~~~~~~g~~------ 144 (394)
T d2pb1a1 71 EQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLR------ 144 (394)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCCHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSST------
T ss_pred HHHHHHHHHCCCCEEEEEecHHHhcCCCCCccchhHHHHHHHHHHHHHHCCcEEEEEeeccCCcccCcCCcCcc------
Confidence 678999999999999999998888877665 554445679999999999999999875210 01111112211
Q ss_pred CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCcccHHHHHHHHHHHHhcCCCcce
Q 009890 136 PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPW 215 (523)
Q Consensus 136 p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~ 215 (523)
+ .....++.+.+...+++++|+++++.++. ...|+++||-||...... ....-++|.+.+.+..|+.+.++|+
T Consensus 145 -~-~~~~~~~~~~~~~~~~~~~ia~~~~~~~~----~~~v~g~el~NEP~~~~~-~~~~~~~~~~~~~~~IR~~~~~~~I 217 (394)
T d2pb1a1 145 -D-SYNFQNGDNTQVTLNVLNTIFKKYGGNEY----SDVVIGIELLNEPLGPVL-NMDKLKQFFLDGYNSLRQTGSVTPV 217 (394)
T ss_dssp -T-CCCTTSTTHHHHHHHHHHHHHHHHSSGGG----TTTEEEEESCSCCCGGGS-CHHHHHHHHHHHHHHHHHTTCCCCE
T ss_pred -C-ccccccHHHHHHHHHHHHHHHHHHccCCC----CCceEEEeecccCCcccc-cHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 1 12335677889999999999999996532 347999999999843211 0123467888889999999999998
Q ss_pred EEcc
Q 009890 216 VMCQ 219 (523)
Q Consensus 216 ~~~~ 219 (523)
+.-+
T Consensus 218 ~i~~ 221 (394)
T d2pb1a1 218 IIHD 221 (394)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 7644
|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Erwinia chrysanthemi [TaxId: 556]
Probab=99.05 E-value=1.2e-09 Score=106.85 Aligned_cols=157 Identities=13% Similarity=0.155 Sum_probs=115.9
Q ss_pred eeEEEecceEEECCEEEEEEEEEeeCCCC----CccchHHHHHHHH-hCCCCEEEEccccCcCCCCCceee--ccCcchH
Q 009890 25 ANVTYDHRAVVIGGKRRVLISGSIHYPRS----TPEMWPDLIQKSK-DGGLDVIETYVFWNLHEPVRNQYN--FEGRYDL 97 (523)
Q Consensus 25 ~~vt~d~~~l~idGk~~~l~sG~iHy~R~----~~~~W~d~l~k~K-a~GlN~V~tYvfWn~HEp~~G~yd--F~G~~dL 97 (523)
.+|+.++..|++||+|+.+.+.++|+... +.-.+++.++.|| +.|+|+||+.+.. ++.+|... =.+...|
T Consensus 3 ~~l~v~G~~~~~nG~~v~l~G~n~~~~~~~~~~~~~~~~~~~~~l~~~~G~N~vR~~~~~---~~~~~~~~~~~~~~~~l 79 (291)
T d1egza_ 3 EPLSVNGNKIYAGEKAKSFAGNSLFWSNNGWGGEKFYTADTVASLKKDWKSSIVRAAMGV---QESGGYLQDPAGNKAKV 79 (291)
T ss_dssp CCEEEETTEEEETTEECCCEEEEEEECCTTSSGGGGCSHHHHHHHHHTTCCCEEEEEEEC---SSTTSTTTCHHHHHHHH
T ss_pred CcEEEECCEEEECCcEEEEEEEecCCcCCCcCCccccCHHHHHHHHHhcCCCEEEEeccc---cccCCcccCcHHHHHHH
Confidence 57899999999999999999999976432 2234688898888 5799999997632 22222111 1123578
Q ss_pred HHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEe
Q 009890 98 VKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIIL 177 (523)
Q Consensus 98 ~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~ 177 (523)
+++|+.|+++||||||-.. . .+...+.+...+++++|++++|++ |.|+
T Consensus 80 d~vv~~a~~~Giyvild~h-----------------~-------~~~~~~~~~~~~~w~~la~ryk~~--------p~v~ 127 (291)
T d1egza_ 80 ERVVDAAIANDMYAIIGWH-----------------S-------HSAENNRSEAIRFFQEMARKYGNK--------PNVI 127 (291)
T ss_dssp HHHHHHHHHTTCEEEEEEE-----------------C-------SCGGGGHHHHHHHHHHHHHHHTTS--------TTEE
T ss_pred HHHHHHHHHCCCeEeeeec-----------------c-------CCCcccHHHHHHHHHHHHHHhCCC--------ccee
Confidence 9999999999999999652 0 123456677888999999999855 4467
Q ss_pred ccccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEc
Q 009890 178 SQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMC 218 (523)
Q Consensus 178 ~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~ 218 (523)
+.|-||..... ....-+.|.+.+.+..|+.+-..+++..
T Consensus 128 ~el~NEP~~~~--~~~~~~~~~~~~~~~IR~~d~~~~I~v~ 166 (291)
T d1egza_ 128 YEIYNEPLQVS--WSNTIKPYAEAVISAIRAIDPDNLIIVG 166 (291)
T ss_dssp EECCSCCCSCC--TTTTHHHHHHHHHHHHHHHCSSSCEEEC
T ss_pred eeeccCcCCCc--chhhHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 99999986532 1234578999999999999998877654
|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Pseudoalteromonas haloplanktis [TaxId: 228]
Probab=99.02 E-value=2.1e-09 Score=105.10 Aligned_cols=160 Identities=14% Similarity=0.098 Sum_probs=116.4
Q ss_pred eeEEEecceEEECCEEEEEEEEEeeCCCC---C-ccchHHHHHHHH-hCCCCEEEEccccCcCCC-CCceeeccCcchHH
Q 009890 25 ANVTYDHRAVVIGGKRRVLISGSIHYPRS---T-PEMWPDLIQKSK-DGGLDVIETYVFWNLHEP-VRNQYNFEGRYDLV 98 (523)
Q Consensus 25 ~~vt~d~~~l~idGk~~~l~sG~iHy~R~---~-~~~W~d~l~k~K-a~GlN~V~tYvfWn~HEp-~~G~ydF~G~~dL~ 98 (523)
..|+.++..|.+||+|+.|.+.+.|..-. . .-..++.++.++ +.|+|+||+.+.+....+ .++.++-.+...|+
T Consensus 3 ~~l~v~G~~i~~nG~~v~l~Gvn~~~~~~~~~~~~~~~~~~~~~l~~~~g~N~VR~~~~~~~~~~~~~~~~~~~~l~~ld 82 (293)
T d1tvna1 3 EKLTVSGNQILAGGENTSFAGPSLFWSNTGWGAEKFYTAETVAKAKTEFNATLIRAAIGHGTSTGGSLNFDWEGNMSRLD 82 (293)
T ss_dssp CCEEEETTEEEETTEECCCEEEEECCCCTTSSCGGGCSHHHHHHHHHHHCCSEEEEEEECCTTSTTSTTTCHHHHHHHHH
T ss_pred CeEEEECCEEeeCCcEEEEEEeecCCcCCCcCCCcccCHHHHHHHHHhCCCcEEEEecccccccccccccCcHHHHHHHH
Confidence 56899999999999999999999975431 2 223456666666 579999999886544443 34455555667899
Q ss_pred HHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEec
Q 009890 99 KFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILS 178 (523)
Q Consensus 99 ~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~ 178 (523)
++++.|+++||+|||..-. .+.....+...+++++|+++.|++ |.|++
T Consensus 83 ~~v~~a~~~gi~vild~h~------------------------~~~~~~~~~~~~~w~~~a~r~k~~--------~~V~~ 130 (293)
T d1tvna1 83 TVVNAAIAEDMYVIIDFHS------------------------HEAHTDQATAVRFFEDVATKYGQY--------DNVIY 130 (293)
T ss_dssp HHHHHHHHTTCEEEEEEEC------------------------SCGGGCHHHHHHHHHHHHHHHTTC--------TTEEE
T ss_pred HHHHHHHHcCCEEEecCcc------------------------CCCcccHHHHHHHHHHHHHHhCCC--------CeEEE
Confidence 9999999999999997510 011234567778889999999865 34569
Q ss_pred cccccccccccccCcccHHHHHHHHHHHHhcCCCcceEEc
Q 009890 179 QIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMC 218 (523)
Q Consensus 179 QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~ 218 (523)
-|=||...... ...-++|.+.+.+..|+.+...+++..
T Consensus 131 el~NEP~~~~~--~~~~~~~~~~~~~~Ir~~dp~~~I~v~ 168 (293)
T d1tvna1 131 EIYNEPLQISW--VNDIKPYAETVIDKIRAIDPDNLIVVG 168 (293)
T ss_dssp ECCSCCCSCCT--TTTHHHHHHHHHHHHHTTCCSCEEEEC
T ss_pred EEecccCCCCc--HHHHHHHHHHHHHHHhhcCCCcEEEEe
Confidence 99999754321 123467888899999999888876653
|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial beta-amylase species: Bacillus cereus [TaxId: 1396]
Probab=99.01 E-value=3.2e-10 Score=116.62 Aligned_cols=83 Identities=19% Similarity=0.275 Sum_probs=67.0
Q ss_pred CCccchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEE--EEec---CceeccccCCC
Q 009890 53 STPEMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYA--HLRI---GPYVCAEWNFG 126 (523)
Q Consensus 53 ~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~V--ilr~---GPyi~aEw~~G 126 (523)
..++.|++.|++||++|+|.|.+-|+|...||+ ||+|||+ .+++++++++++||++ ||.+ |.-+.+ ...-
T Consensus 26 ~~~~~~~~~L~~LK~aGV~gV~vdVwWGivE~~~Pg~Ydws---~yd~l~~mv~~~GLKi~vvmsfH~cGgnvgd-~~ti 101 (417)
T d1vema2 26 TNWETFENDLRWAKQNGFYAITVDFWWGDMEKNGDQQFDFS---YAQRFAQSVKNAGMKMIPIISTHQCGGNVGD-DCNV 101 (417)
T ss_dssp SCHHHHHHHHHHHHHTTEEEEEEEEEHHHHTCSSTTCCCCH---HHHHHHHHHHHTTCEEEEEEECSCBSSSTTC-CCCB
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeeeeeeecCCCCccCcH---HHHHHHHHHHHcCCeEEEEEEecccCCCCCC-cccc
Confidence 367889999999999999999999999999995 9999999 7999999999999985 5655 211111 2233
Q ss_pred CCCcccc---CCCCee
Q 009890 127 GFPLWLH---FIPGIQ 139 (523)
Q Consensus 127 G~P~WL~---~~p~i~ 139 (523)
.+|.|+. ..|+|.
T Consensus 102 ~lP~Wv~e~~~~pDi~ 117 (417)
T d1vema2 102 PIPSWVWNQKSDDSLY 117 (417)
T ss_dssp CCCGGGGGGCSSSCSS
T ss_pred CCCHHHHhcccCCCee
Confidence 5899996 368873
|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelC species: Clostridium thermocellum [TaxId: 1515]
Probab=99.01 E-value=6e-10 Score=111.04 Aligned_cols=141 Identities=10% Similarity=0.009 Sum_probs=100.1
Q ss_pred HHHHHHHHhCCCCEEEEccccCcCCCCC--ceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCC
Q 009890 59 PDLIQKSKDGGLDVIETYVFWNLHEPVR--NQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIP 136 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~tYvfWn~HEp~~--G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p 136 (523)
+++|+.||++|+|+||+.|.|...++.+ ++|+-++-..|+++|+.|+++||+|||.+ | +.|.|-....
T Consensus 31 e~d~~~i~~~G~n~vRlpi~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gi~vild~----H------~~p~~~~~~~ 100 (340)
T d1ceoa_ 31 EKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDM----H------HAPGYRFQDF 100 (340)
T ss_dssp HHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEE----E------ECCC------
T ss_pred HHHHHHHHHcCCCEEEeecCHHHhccCCCCCccCHHHHHHHHHHHHHHHHcCCEEEEEe----c------CCCccccccc
Confidence 5789999999999999999999888764 66665555679999999999999999875 1 1232221111
Q ss_pred CeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCcccHHHHHHHHHHHHhcCCCcceE
Q 009890 137 GIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWV 216 (523)
Q Consensus 137 ~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~ 216 (523)
.-..-.+++.+.+....++++|++++|.+ ..|++++|-||..... .+.-.++.+.+.+..|+.+.+.+++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~la~ry~~~-------p~v~~~el~NEP~~~~---~~~~~~~~~~~~~aIR~~dp~~~I~ 170 (340)
T d1ceoa_ 101 KTSTLFEDPNQQKRFVDIWRFLAKRYINE-------REHIAFELLNQVVEPD---STRWNKLMLECIKAIREIDSTMWLY 170 (340)
T ss_dssp --CCTTTCHHHHHHHHHHHHHHHHHTTTC-------CSSEEEECCSCCCCSS---SHHHHHHHHHHHHHHHHHCSSCCEE
T ss_pred ccccccccHHHHHHHHHHHHHHHHhcCCC-------CcEEEEeeeeecCCCC---HHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 01122357888888999999999988854 3699999999985321 1122355666666677778888776
Q ss_pred Ecc
Q 009890 217 MCQ 219 (523)
Q Consensus 217 ~~~ 219 (523)
.+.
T Consensus 171 v~g 173 (340)
T d1ceoa_ 171 IGG 173 (340)
T ss_dssp EEC
T ss_pred eCC
Confidence 653
|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Probab=98.97 E-value=3.6e-09 Score=104.32 Aligned_cols=171 Identities=12% Similarity=0.041 Sum_probs=115.0
Q ss_pred eEEEecceEE-ECCEEEEEEEEEeeCCC----C----CccchHHHHHHHHhCCCCEEEEccccCcCCCCCceee------
Q 009890 26 NVTYDHRAVV-IGGKRRVLISGSIHYPR----S----TPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYN------ 90 (523)
Q Consensus 26 ~vt~d~~~l~-idGk~~~l~sG~iHy~R----~----~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~yd------ 90 (523)
-++.+++.|. -+|+++.+.+...+... . ..+..++.|+.||++|+|+||+.|.|..+++.+....
T Consensus 5 ~l~~~G~~~~d~~G~~~~l~GvN~~g~~~~~~~~~~~~~~~~~~~~~~i~~~G~N~VRlpv~~~~~~~~~~~~~~~~~~~ 84 (358)
T d1ecea_ 5 YWHTSGREILDANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQM 84 (358)
T ss_dssp CCEEETTEEECTTSCEECCEEEECCCBTTTTCSCTTTTTSCHHHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSS
T ss_pred eEEeeCCEEECCCCCEEEEEEEccCcccccccccccCCccHHHHHHHHHHHcCCCEEEecCcHHHccCCCCCCCcccccc
Confidence 3567888775 67999999998865322 2 2345689999999999999999999998887543322
Q ss_pred ------ccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHh
Q 009890 91 ------FEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQ 164 (523)
Q Consensus 91 ------F~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~ 164 (523)
......|+++++.|+++||+|||-. +.-...+.-+.|.. ++...+...+.++.|+++++.
T Consensus 85 ~~~~~~~~~~~~ld~~v~~a~~~Gl~Vildl----h~~~~~~~~~~~~~----------~~~~~~~~~~~~~~ia~~~~~ 150 (358)
T d1ecea_ 85 NQDLQGLTSLQVMDKIVAYAGQIGLRIILDR----HRPDCSGQSALWYT----------SSVSEATWISDLQALAQRYKG 150 (358)
T ss_dssp CTTTTTCCHHHHHHHHHHHHHHTTCEEEEEE----EESBTTBCCSSSCC----------SSSCHHHHHHHHHHHHHHTTT
T ss_pred ChhhhchhHHHHHHHHHHHHHHCCCceeeec----ccccccCCCccccC----------ChHHHHHHHHHHHHHHHhhcC
Confidence 1223569999999999999999865 11111112233322 233345566677888888774
Q ss_pred cccccccCCceEeccccccccccccc-cC---cccHHHHHHHHHHHHhcCCCcceEE
Q 009890 165 EKLYASQGGPIILSQIENEYGNIDSA-YG---AAGKSYIKWAAGMALSLDTGVPWVM 217 (523)
Q Consensus 165 ~~l~~~~gGpII~~QIENEyg~~~~~-~g---~~~~~y~~~l~~~~~~~g~~vP~~~ 217 (523)
+ ..|++++|-||....... .+ ..-.++++.+.+..|+.+...+++.
T Consensus 151 ~-------~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~Ir~~d~~~~v~v 200 (358)
T d1ecea_ 151 N-------PTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFV 200 (358)
T ss_dssp C-------TTEEEEECSSCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred c-------cceEeeeeccccccCCcCCccchhhhHHHHHHHHHHHHHhhCCCcEEEE
Confidence 4 479999999997542110 01 1235677778888888887776554
|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Bacillus agaradhaerens [TaxId: 76935]
Probab=98.90 E-value=3.1e-09 Score=103.88 Aligned_cols=160 Identities=15% Similarity=0.173 Sum_probs=112.5
Q ss_pred eEEEecceEE-ECCEEEEEEEEEeeCCCCCccch-HHHHHHHH-hCCCCEEEEccccCcCCCCCcee--eccCcchHHHH
Q 009890 26 NVTYDHRAVV-IGGKRRVLISGSIHYPRSTPEMW-PDLIQKSK-DGGLDVIETYVFWNLHEPVRNQY--NFEGRYDLVKF 100 (523)
Q Consensus 26 ~vt~d~~~l~-idGk~~~l~sG~iHy~R~~~~~W-~d~l~k~K-a~GlN~V~tYvfWn~HEp~~G~y--dF~G~~dL~~f 100 (523)
.++.+++.|. -||++++|.+-..|.....++.. ++.++.++ +.|+|+||+.+.+ .++.| |=+....|+++
T Consensus 8 ~l~v~g~~ivd~nG~~v~lrGvn~~~~~~~~~~~~~~~~~~l~~~~G~N~VR~~~~~-----~~~~~~~~~~~~~~ld~~ 82 (300)
T d7a3ha_ 8 QLSISNGELVNERGEQVQLKGMSSHGLQWYGQFVNYESMKWLRDDWGINVFRAAMYT-----SSGGYIDDPSVKEKVKEA 82 (300)
T ss_dssp SCEEETTEEECTTSCBCCCEEEEESCHHHHGGGCSHHHHHHHHHHTCCCEEEEEEES-----STTSTTTCTTHHHHHHHH
T ss_pred eEEEeCCEEECCCCCEEEEEEEeCCCcccccccCCHHHHHHHHHHcCCCEEEEeeEc-----CccCcccCHHHHHHHHHH
Confidence 5778888888 89999999998888533222222 56677764 6899999997643 33322 22233468999
Q ss_pred HHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccc
Q 009890 101 VKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQI 180 (523)
Q Consensus 101 l~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QI 180 (523)
+++|+++||+|||... ..+.+ ....+.++..++++.|+++.|++ |.|++.|
T Consensus 83 v~~a~~~Gl~Vild~h----------~~~~~-----------~~~~~~~~~~~~w~~ia~ryk~~--------p~V~~el 133 (300)
T d7a3ha_ 83 VEAAIDLDIYVIIDWH----------ILSDN-----------DPNIYKEEAKDFFDEMSELYGDY--------PNVIYEI 133 (300)
T ss_dssp HHHHHHHTCEEEEEEE----------CSSSC-----------STTTTHHHHHHHHHHHHHHHTTC--------TTEEEEC
T ss_pred HHHHHHCCCEEEEeee----------ecCCC-----------CChhhHHHHHHHHHHHHHHhCCC--------Ccceeee
Confidence 9999999999999752 11111 22345677888999999999865 4467999
Q ss_pred cccccccccccCcccHHHHHHHHHHHHhcCCCcceEEcc
Q 009890 181 ENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQ 219 (523)
Q Consensus 181 ENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~vP~~~~~ 219 (523)
-||...........-+.|.+.+.+.+|+.+...+++...
T Consensus 134 ~NEP~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~i~v~~ 172 (300)
T d7a3ha_ 134 ANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGT 172 (300)
T ss_dssp CSCCCSTTCCTTTTHHHHHHHHHHHHHTTCSSSCEEECC
T ss_pred ecccCCCCCCchhHHHHHHHHHHHHHHhcCCCCceeecC
Confidence 999864332223345678889999999999888877654
|
| >d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-D-xylosidase, catalytic domain species: Thermoanaerobacterium saccharolyticum [TaxId: 28896]
Probab=98.89 E-value=3.8e-09 Score=102.63 Aligned_cols=159 Identities=13% Similarity=0.030 Sum_probs=104.0
Q ss_pred EEeeCCCCCccchHHHHHHH-HhCCCCEEEEc----------cccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEe
Q 009890 46 GSIHYPRSTPEMWPDLIQKS-KDGGLDVIETY----------VFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLR 114 (523)
Q Consensus 46 G~iHy~R~~~~~W~d~l~k~-Ka~GlN~V~tY----------vfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr 114 (523)
|.-|.+...++.|.+.|..+ |++|++.||++ ..|..-++.++.|||+ .++++++.|+++||.+++.
T Consensus 10 g~~~~~~~l~~d~~~~l~~~~~~lG~~~vR~~~~~~~~~~~~~~~~~~~~~~~~yd~~---~~D~~~~~~~~~g~~~~~~ 86 (346)
T d1uhva2 10 GTGRLGLALQKEYIETLKYVKENIDFKYIRGHGLLCDDVGIYREDVVGDEVKPFYNFT---YIDRIFDSFLEIGIRPFVE 86 (346)
T ss_dssp ECSCGGGGGBHHHHHHHHHHHTTSCCCEEECSCTTSTTTCCEEEEEETTEEEEEECCH---HHHHHHHHHHHHTCEECEE
T ss_pred ccCCcccccCHHHHHHHHHHHHhcCCCEEEccCcccccCccccccccCccCCcccChH---hHHHHHHHHHHcCCCeEEE
Confidence 33455556677788888776 66999999974 2344456678889998 7999999999999999887
Q ss_pred cCceeccccCCCCCCccccCCCCe----eeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccc
Q 009890 115 IGPYVCAEWNFGGFPLWLHFIPGI----QFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSA 190 (523)
Q Consensus 115 ~GPyi~aEw~~GG~P~WL~~~p~i----~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~ 190 (523)
++ ..|.|+...+.. .-....|.-.+...+|+++++++++.. .......|..|||.||.......
T Consensus 87 l~----------~~p~~~~~~~~~~~~~~~~~~~p~~~~~w~~~v~~~~~~y~~~--~~~~~~~~~~~evwNEp~~~~~~ 154 (346)
T d1uhva2 87 IG----------FMPKKLASGTQTVFYWEGNVTPPKDYEKWSDLVKAVLHHFISR--YGIEEVLKWPFEIWNEPNLKEFW 154 (346)
T ss_dssp EC----------CCCTTTBSSCCEETTTTEECSCBSCHHHHHHHHHHHHHHHHHH--HCHHHHTTCCEEESSCTTSTTTS
T ss_pred Ee----------ccCccccCCCCCcccccccCCChhhHHHHHHHHHHHHHHHHhh--cCcccccccccccccCcccccCC
Confidence 73 567777653221 123334555566677777777777632 11233468889999998753211
Q ss_pred cCcccHHHHHHHH---HHHHhcCCCcceEEcc
Q 009890 191 YGAAGKSYIKWAA---GMALSLDTGVPWVMCQ 219 (523)
Q Consensus 191 ~g~~~~~y~~~l~---~~~~~~g~~vP~~~~~ 219 (523)
.+....+|.+.++ +.+++.+.++.++.+.
T Consensus 155 ~~~~~~~y~~~~~~~~~aik~~~P~~~v~~~~ 186 (346)
T d1uhva2 155 KDADEKEYFKLYKVTAKAIKEVNENLKVGGPA 186 (346)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHhccCCCceEeecc
Confidence 1223456765444 4555566677665544
|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]
Probab=98.83 E-value=7.5e-09 Score=101.19 Aligned_cols=126 Identities=17% Similarity=0.234 Sum_probs=91.4
Q ss_pred HHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC----
Q 009890 59 PDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF---- 134 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~---- 134 (523)
.+.++.||++|+|+||++| | ++|..|.++|+ .++++++.|+++||+|||-+. -.|.|...
T Consensus 30 ~~~~~~lk~~G~n~VRi~v-W--~~p~~g~~~~~---~~~~~v~~a~~~gl~vil~~h----------~~~~wa~~~~~~ 93 (332)
T d1hjsa_ 30 QPLENILAANGVNTVRQRV-W--VNPADGNYNLD---YNIAIAKRAKAAGLGVYIDFH----------YSDTWADPAHQT 93 (332)
T ss_dssp CCHHHHHHHTTCCEEEEEE-C--SSCTTCTTSHH---HHHHHHHHHHHTTCEEEEEEC----------CSSSCCBTTBCB
T ss_pred ccHHHHHHHcCCCEEEeee-e--ecCCCCccCHH---HHHHHHHHHHHCCCEEEEEec----------CCccccCccccC
Confidence 5688899999999999998 8 69999999998 899999999999999999873 13455532
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccc-ccccC--cccHHHHHHHHHHHH
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNI-DSAYG--AAGKSYIKWAAGMAL 207 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~-~~~~g--~~~~~y~~~l~~~~~ 207 (523)
.|. ....+-+...+++..+++.++.++|++ |..+..+||.||.+.- .+..+ .....|.+.++..++
T Consensus 94 ~p~-~~~~~~~~~~~~~~~~~~~v~~~~k~~------~~~~~~~~i~nE~n~g~~w~~~~~~~~~~~~~l~~~a~~ 162 (332)
T d1hjsa_ 94 MPA-GWPSDIDNLSWKLYNYTLDAANKLQNA------GIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAW 162 (332)
T ss_dssp CCT-TCCCSHHHHHHHHHHHHHHHHHHHHHT------TCCCSEEEESSSGGGEETBTTEETTCHHHHHHHHHHHHH
T ss_pred CCc-ccccchhHHHHHHHHHHHHHHHHHHhc------CCchhHhhhccccCCcccCccCCcchHHHHHHHHHHHHH
Confidence 121 011233456788899999999999944 5678899999998642 11111 223456666666543
|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.76 E-value=1.8e-08 Score=103.72 Aligned_cols=147 Identities=10% Similarity=0.025 Sum_probs=99.6
Q ss_pred HHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCc--chHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCC
Q 009890 59 PDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGR--YDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIP 136 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~--~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p 136 (523)
+++++.||++|+|+||+.|.|...++.++.+...+. ..|+++|+.|+++||+|||-. | |.|.+.....
T Consensus 76 e~D~~~i~~~G~N~VRiPi~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gl~VilDl----H------~~pG~~~~~~ 145 (408)
T d1h4pa_ 76 EQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDL----H------GAAGSQNGFD 145 (408)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEE----E------ECTTCSSCCG
T ss_pred HHHHHHHHHCCCCEEEEeccHHHhcCCCCCCCcChhHHHHHHHHHHHHHHCCCEEEEEe----C------CCCCCCcCCC
Confidence 678999999999999999999999988877665543 459999999999999999864 1 2333322110
Q ss_pred --Ce--eeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCcccHHHHHHHHHHHHh-cCC
Q 009890 137 --GI--QFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALS-LDT 211 (523)
Q Consensus 137 --~i--~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~-~g~ 211 (523)
+. .....++..++.+.+.+++|+++++.++. ...|++++|=||...........-+.|.+.+.+..|+ ..-
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~ia~r~~~~~~----~~~v~g~el~NEP~~~~~~~~~~~~~~~~~~~~~iR~~~~~ 221 (408)
T d1h4pa_ 146 NSGLRDSYKFLEDSNLAVTINVLNYILKKYSAEEY----LDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKS 221 (408)
T ss_dssp GGSSTTCCCTTSHHHHHHHHHHHHHHHHHTTSHHH----HTTEEEEESCSCCCGGGSCHHHHHHHTHHHHHHHHHHTTCC
T ss_pred CCCcccccccCCchHHHHHHHHHHHHHHHhccccc----ccceeeeecccCccccccchHHHHHHHHHHHHHHHHhcccc
Confidence 00 01123456778888888899888885421 1369999999998643211111234566777777765 344
Q ss_pred CcceEEcc
Q 009890 212 GVPWVMCQ 219 (523)
Q Consensus 212 ~vP~~~~~ 219 (523)
.+|++.-+
T Consensus 222 ~~~iv~~d 229 (408)
T d1h4pa_ 222 DQVIIIHD 229 (408)
T ss_dssp CCCEEEEC
T ss_pred CceEEEec
Confidence 55555543
|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Fungus (Aspergillus aculeatus) [TaxId: 5053]
Probab=98.74 E-value=1.6e-08 Score=101.70 Aligned_cols=106 Identities=22% Similarity=0.302 Sum_probs=82.9
Q ss_pred HHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC----
Q 009890 59 PDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF---- 134 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~---- 134 (523)
.|.++.+|++|+|+||+.| | ++|.+|.++++ +++++++.|+++||+|+|-+. .-|.|...
T Consensus 30 ~d~~~~lk~~G~n~VRlrv-W--~~p~~g~~~~~---~~~~~~~~a~~~Gm~vll~~h----------ysd~Wadp~~q~ 93 (334)
T d1foba_ 30 QALETILADAGINSIRQRV-W--VNPSDGSYDLD---YNLELAKRVKAAGMSLYLDLH----------LSDTWADPSDQT 93 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEE-C--SCCTTCTTCHH---HHHHHHHHHHHTTCEEEEEEC----------CSSSCCBTTBCB
T ss_pred ccHHHHHHHcCCCEEEeee-e--eCCCCCcCcHH---HHHHHHHHHHHCCCEEEEEec----------CCCcccCCCcCC
Confidence 3678899999999999998 7 79999999998 999999999999999999872 23445421
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
.|.-....+-+...+++..|++.+++.+|+. |..+.+|||.||...
T Consensus 94 ~P~aw~~~~~~~~~~~~~~~t~~v~~~~k~~------~~~~~~vqIgNE~n~ 139 (334)
T d1foba_ 94 TPSGWSTTDLGTLKWQLYNYTLEVCNTFAEN------DIDIEIISIGNEIRA 139 (334)
T ss_dssp CCTTSCSSCHHHHHHHHHHHHHHHHHHHHHT------TCCCSEEEESSSGGG
T ss_pred CcccccccccccHHHHHHHHHHHHHHHHHhc------CCCceEEEcccccCc
Confidence 2221111123556788999999999999954 567899999999864
|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase homologue TM1752 species: Thermotoga maritima [TaxId: 2336]
Probab=98.73 E-value=4.4e-08 Score=95.16 Aligned_cols=148 Identities=10% Similarity=-0.052 Sum_probs=99.8
Q ss_pred CccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeec--cCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcc
Q 009890 54 TPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNF--EGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLW 131 (523)
Q Consensus 54 ~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF--~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~W 131 (523)
.....+++++.||+.|+|+||+.|-|...||.++.+.+ ++-..|+++|+.|+++||+|||-.- +.|.+
T Consensus 18 ~~~~~e~d~~~l~~~G~n~vRlpv~~~~~~~~~~~~~~~~~~l~~ld~~v~~~~~~gi~vildlH----------~~pg~ 87 (325)
T d1vjza_ 18 TGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISLH----------RAPGY 87 (325)
T ss_dssp CCCCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCEEEEEEE----------EETTE
T ss_pred cCCCCHHHHHHHHHcCCCEEEecccHHHccCCCCCCccCHHHHHHHHHHHHHHHHcCCcEEEeec----------ccccc
Confidence 44567899999999999999999999999998665443 4445799999999999999998431 11222
Q ss_pred ccCC--CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCccc---HHHHHHHHHHH
Q 009890 132 LHFI--PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAG---KSYIKWAAGMA 206 (523)
Q Consensus 132 L~~~--p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~---~~y~~~l~~~~ 206 (523)
.... ......-.++.+.++...+++.|+++++++ ...|++++|-||...... .+... .++.+.+.+..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~a~~~~~~------~~~i~~~el~NEP~~~~~-~~~~~~~~~~~~~~~~~~i 160 (325)
T d1vjza_ 88 SVNKEVEEKTNLWKDETAQEAFIHHWSFIARRYKGI------SSTHLSFNLINEPPFPDP-QIMSVEDHNSLIKRTITEI 160 (325)
T ss_dssp ESCTTSCCSSCTTTCHHHHHHHHHHHHHHHHHHTTS------CTTTEEEECSSCCCCCBT-TTBCHHHHHHHHHHHHHHH
T ss_pred ccCcccccccccccchhhHHHHHHHHHHHHHHhccc------ceeEEeeeccccCCCCcc-ccchhhhhhhHHHHHHHHH
Confidence 1110 000112245667777778888888888743 235789999999964221 11122 23555566666
Q ss_pred HhcCCCcceEEc
Q 009890 207 LSLDTGVPWVMC 218 (523)
Q Consensus 207 ~~~g~~vP~~~~ 218 (523)
++.+.+.+++..
T Consensus 161 r~~~p~~~v~v~ 172 (325)
T d1vjza_ 161 RKIDPERLIIID 172 (325)
T ss_dssp HHHCTTCCEEEE
T ss_pred hccCCCcEEEec
Confidence 777888777654
|
| >d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Cellulomonas fimi [TaxId: 1708]
Probab=98.66 E-value=1.9e-08 Score=99.26 Aligned_cols=150 Identities=17% Similarity=0.278 Sum_probs=109.6
Q ss_pred EEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEc--cccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceec
Q 009890 43 LISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETY--VFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVC 120 (523)
Q Consensus 43 l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tY--vfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~ 120 (523)
.++..++..+......+++|. .-+|.|..- .-|...||+||+|||+ .++++++.|+++||.|.-.+ -+
T Consensus 14 ~fG~a~~~~~l~~~~y~~~~~----~~fn~~t~~n~~kW~~iep~~g~~~~~---~~D~~v~~a~~~gl~v~gh~--lv- 83 (312)
T d1fh9a_ 14 DFGFALDPNRLSEAQYKAIAD----SEFNLVVAENAMKWDATEPSQNSFSFG---AGDRVASYAADTGKELYGHT--LV- 83 (312)
T ss_dssp EEEEEECGGGGGSHHHHHHHH----HHCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHHTCEEEEEE--EE-
T ss_pred EEEEecChhhccCHHHHHHHH----HhCCcccccccCcchhhcCCCCcCCcH---HHHHHHHHHHHCCCEEEEec--cc-
Confidence 478889887764333344443 258888764 6799999999999999 89999999999999986443 22
Q ss_pred cccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccc-------cCc
Q 009890 121 AEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSA-------YGA 193 (523)
Q Consensus 121 aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~-------~g~ 193 (523)
|. +-.|.|+... +.+..++.+++++++++.+++ |-|..|+|-||....... +..
T Consensus 84 --w~-~~~p~~~~~~-------~~~~~~~~~~~~i~~v~~ry~---------g~i~~WdV~NEp~~~~~~~~~~~~~~~~ 144 (312)
T d1fh9a_ 84 --WH-SQLPDWAKNL-------NGSAFESAMVNHVTKVADHFE---------GKVASWDVVNEAFADGGGRRQDSAFQQK 144 (312)
T ss_dssp --ES-SSCCHHHHTC-------CHHHHHHHHHHHHHHHHHHTT---------TTCCEEEEEECCBCTTSSBCSSCHHHHH
T ss_pred --cc-cccccccccc-------chHHHHHHHHHHHHHHHHhcC---------CCceEEEEecccccCCCCCcCCchHHHh
Confidence 22 3467777532 335677888888888888876 469999999997432110 111
Q ss_pred ccHHHHHHHHHHHHhcCCCcceEEccCC
Q 009890 194 AGKSYIKWAAGMALSLDTGVPWVMCQQS 221 (523)
Q Consensus 194 ~~~~y~~~l~~~~~~~g~~vP~~~~~~~ 221 (523)
-+.+|++.+-+.|++.+.+++++.++..
T Consensus 145 lg~~~i~~a~~~ar~~dP~a~l~~n~~~ 172 (312)
T d1fh9a_ 145 LGNGYIETAFRAARAADPTAKLCINDYN 172 (312)
T ss_dssp HCTTHHHHHHHHHHHHCSSSEEEEEESS
T ss_pred hhHHHHHHHHHHHHhhCCCceEEeecCc
Confidence 2457899999999999999999888753
|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Bacillus licheniformis [TaxId: 1402]
Probab=98.62 E-value=9.3e-08 Score=97.16 Aligned_cols=141 Identities=15% Similarity=0.134 Sum_probs=92.8
Q ss_pred HHHHHHHHhCCCCEEEEcccc-----CcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcccc
Q 009890 59 PDLIQKSKDGGLDVIETYVFW-----NLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH 133 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~tYvfW-----n~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~ 133 (523)
+|.|+.||++|+|+||+.|.| +..++..|.++++ .++++++.|+++||+|+|-+- .-|.|..
T Consensus 41 ~d~~~~lk~~G~n~VRl~vw~~~~~~~~~~~~~g~~~l~---~~~~~~~~a~~~Gl~v~ldlH----------~sd~wad 107 (387)
T d1ur4a_ 41 QDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLE---KAIQIGKRATANGMKLLADFH----------YSDFWAD 107 (387)
T ss_dssp CCHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCCHH---HHHHHHHHHHHTTCEEEEEEC----------SSSSCCS
T ss_pred ccHHHHHHHcCCCEEEeecccCCcccccCcCCCccccHH---HHHHHHHHHHHCCCEEEEEeC----------CCCCCcC
Confidence 467999999999999998843 3444456788877 899999999999999999762 2234542
Q ss_pred C----CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCcccHHHHHH---HHHHH
Q 009890 134 F----IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKW---AAGMA 206 (523)
Q Consensus 134 ~----~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~---l~~~~ 206 (523)
. .|.-..-.+.....+.+.++++.++..+++ +|..+.+|||-||..... .+......|.+. ..+.+
T Consensus 108 p~~q~~p~~w~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~eigNE~~~~~-~~~~~~~~~~~ll~~~~~av 180 (387)
T d1ur4a_ 108 PAKQKAPKAWANLNFEDKKTALYQYTKQSLKAMKA------AGIDIGMVQVGNETNGGL-AGETDWAKMSQLFNAGSQAV 180 (387)
T ss_dssp SSCCCCCGGGTTCCHHHHHHHHHHHHHHHHHHHHH------TTCCEEEEEESSSCSSCB-TTBCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCchhhhccchhHHHHHHHHHHHHHHHHHhh------cCCCccEEEEecCCCcCc-cCcCCHHHHHHHHHHHHHHH
Confidence 1 121100112345667777888888888774 456788999999985421 112233445444 45555
Q ss_pred HhcCCCcceEEcc
Q 009890 207 LSLDTGVPWVMCQ 219 (523)
Q Consensus 207 ~~~g~~vP~~~~~ 219 (523)
|+.+-...++.+.
T Consensus 181 r~~dp~~~vi~~~ 193 (387)
T d1ur4a_ 181 RETDSNILVALHF 193 (387)
T ss_dssp HHHCTTSEEEEEE
T ss_pred HhcCCCceEEEec
Confidence 6667666666554
|
| >d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Thermotoga maritima [TaxId: 2336]
Probab=98.51 E-value=5.9e-07 Score=88.57 Aligned_cols=152 Identities=20% Similarity=0.314 Sum_probs=106.9
Q ss_pred EEEEEeeCCCCC---ccchHHHHHHHHhCCCCEEEEc--cccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCc
Q 009890 43 LISGSIHYPRST---PEMWPDLIQKSKDGGLDVIETY--VFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGP 117 (523)
Q Consensus 43 l~sG~iHy~R~~---~~~W~d~l~k~Ka~GlN~V~tY--vfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GP 117 (523)
.++-.++..+.. -+..++.+.+ =+|.+..- .-|...||+||+|||+ .++++++.|+++||.|.-.+
T Consensus 13 ~~g~~~~~~~~~~~~~~~y~~~~~~----~fn~~t~~n~~kW~~iEp~~G~~~~~---~~D~~v~~a~~~gi~v~gh~-- 83 (324)
T d1vbua1 13 YIGFAAINNFWSLSDAEKYMEVARR----EFNILTPENQMKWDTIHPERDRYNFT---PAEKHVEFAEENDMIVHGHT-- 83 (324)
T ss_dssp EEEEEECTTGGGSTTHHHHHHHHHH----HCSEEEESSTTSHHHHCCBTTEEECH---HHHHHHHHHHHTTCEEEEEE--
T ss_pred eEEEEeccccccccccHHHHHHHHH----hcCccccccCCchHHhcCCCCccChH---HHHHHHHHHHHCCCEEEEec--
Confidence 355566655442 2335555553 38888764 6699999999999999 89999999999999976432
Q ss_pred eeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccc------c
Q 009890 118 YVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSA------Y 191 (523)
Q Consensus 118 yi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~------~ 191 (523)
-+ |. ...|.|+...+ ...+..++.+++|+++++.+.+ |.|.+|+|-||....... +
T Consensus 84 l~---W~-~~~p~~~~~~~-----~~~~~~~~~~~~~i~~v~~ry~---------g~v~~WdV~NEp~~~~~~~~~~~~~ 145 (324)
T d1vbua1 84 LV---WH-NQLPGWITGRE-----WTKEELLNVLEDHIKTVVSHFK---------GRVKIWDVVNEAVSDSGTYRESVWY 145 (324)
T ss_dssp EE---CS-SSCCHHHHTSC-----CCHHHHHHHHHHHHHHHHHHTT---------TTCCEEEEEESCBCTTSSBCCCHHH
T ss_pred Cc---cc-ccCCccccccc-----cchHHHHHHHHHHHHHHHHhcC---------CCceEEEEecccccCCCCccCChHH
Confidence 11 32 23577765322 2345567888899988888877 468899999997432211 1
Q ss_pred CcccHHHHHHHHHHHHhcCCCcceEEccCC
Q 009890 192 GAAGKSYIKWAAGMALSLDTGVPWVMCQQS 221 (523)
Q Consensus 192 g~~~~~y~~~l~~~~~~~g~~vP~~~~~~~ 221 (523)
...+..|++.+-+.|++.+.++.++.++..
T Consensus 146 ~~~~~~~~~~a~~~ar~~dP~a~l~~n~~~ 175 (324)
T d1vbua1 146 KTIGPEYIEKAFRWAKEADPDAILIYNDYS 175 (324)
T ss_dssp HHHCTHHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred HHhHHHHHHHHHHHHHHhCCCCEEEEecCC
Confidence 123467888888999999999988888753
|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase EngI species: Thermoascus aurantiacus [TaxId: 5087]
Probab=98.42 E-value=2.2e-07 Score=91.38 Aligned_cols=124 Identities=15% Similarity=0.218 Sum_probs=88.3
Q ss_pred HHHHHHHHhCCCCEEEEccccCcCCCC--CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCC
Q 009890 59 PDLIQKSKDGGLDVIETYVFWNLHEPV--RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIP 136 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~tYvfWn~HEp~--~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p 136 (523)
++.|+.+|+.|+|+||+.|.|..++|. ++.++-+....|+++|+.|.++||+|||-+-- ...|-.
T Consensus 34 ~~di~~l~~~G~N~VRlPv~~~~~~~~~~~~~~~~~~~~~l~~~v~~a~~~gl~vIlD~H~----------~~~~~~--- 100 (305)
T d1h1na_ 34 PNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKGAYAVVDPHN----------YGRYYN--- 100 (305)
T ss_dssp HHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEECC----------TTEETT---
T ss_pred HHHHHHHHHCCCCEEEeeeeHHHhccCCCCCccCHHHHHHHHHHHHHHHhcCCeEEEeccc----------CCcccc---
Confidence 688999999999999999999999986 45666555668999999999999999998731 111111
Q ss_pred CeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCcccHHHHHHHHHHHHhcCCC
Q 009890 137 GIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTG 212 (523)
Q Consensus 137 ~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~y~~~l~~~~~~~g~~ 212 (523)
+ .. ...++...++++|+++++++ |.|++.|=||..... .+.-+.+.+.+.+..|+.+-.
T Consensus 101 ~--~~----~~~~~~~~~W~~ia~~~~~~--------~~v~~el~NEP~~~~---~~~w~~~~~~~~~~IR~~~~~ 159 (305)
T d1h1na_ 101 S--II----SSPSDFETFWKTVASQFASN--------PLVIFDTDNEYHDMD---QTLVLNLNQAAIDGIRSAGAT 159 (305)
T ss_dssp E--EC----CCHHHHHHHHHHHHHTSTTC--------TTEEEECCSCCCSSC---HHHHHHHHHHHHHHHHHTTCC
T ss_pred c--cc----ccHHHHHHHHHHHHHHhCCC--------CeeEEEeccCCCCcc---HHHHHHHHHHHHHHHHhcCCC
Confidence 1 11 12244566778888887743 445799999986421 123345677777888887743
|
| >d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Streptomyces halstedii [TaxId: 1944]
Probab=98.38 E-value=4.2e-07 Score=89.09 Aligned_cols=148 Identities=15% Similarity=0.264 Sum_probs=106.9
Q ss_pred EEEEeeCCCCCccchHHHHHHHHhCCCCEEEEc--cccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceecc
Q 009890 44 ISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETY--VFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCA 121 (523)
Q Consensus 44 ~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tY--vfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~a 121 (523)
++..+++.......-++.+++ -+|.+..- .-|...||+||+|||+ .++++++.|+++||.|.-. |.+
T Consensus 15 fG~a~~~~~l~~~~y~~~~~~----~fn~~t~~n~~kW~~~ep~~G~~~~~---~~D~~v~~a~~~gi~v~gh--~l~-- 83 (302)
T d1nq6a_ 15 FGAAVAANHLGEAAYASTLDA----QFGSVTPENEMKWDAVESSRNSFSFS---AADRIVSHAQSKGMKVRGH--TLV-- 83 (302)
T ss_dssp EEEEECGGGTTSHHHHHHHHH----HCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHHTCEEEEE--EEE--
T ss_pred EEEecChhhcCCHHHHHHHHH----hCCeeeeccCccchhhcCCCCcCCcH---HHHHHHHHHHHCCCEEEee--ccc--
Confidence 677888777653333443432 38888874 6699999999999999 8999999999999997421 222
Q ss_pred ccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccccc--------ccCc
Q 009890 122 EWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDS--------AYGA 193 (523)
Q Consensus 122 Ew~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~--------~~g~ 193 (523)
|. ...|.|+... +.+..++.++++++.++.+.+ |.|..|+|=||...... .+..
T Consensus 84 -w~-~~~p~w~~~~-------~~~~~~~~~~~~i~~v~~ry~---------g~i~~WdV~NEp~~~~~~~~~~~~~~~~~ 145 (302)
T d1nq6a_ 84 -WH-SQLPGWVSPL-------AATDLRSAMNNHITQVMTHYK---------GKIHSWDVVNEAFQDGGSGARRSSPFQDK 145 (302)
T ss_dssp -ES-TTCCTTTTTS-------CHHHHHHHHHHHHHHHHHHTT---------TSCSEEEEEECCBCSSSCCCBCCCHHHHH
T ss_pred -cc-cccccccccc-------chHHHHHHHHHHHHHHHHHcC---------CCcceEEEeccccccCCCCccCCChhhhh
Confidence 21 3478887542 234566788888888888776 46999999999743211 0112
Q ss_pred ccHHHHHHHHHHHHhcCCCcceEEccC
Q 009890 194 AGKSYIKWAAGMALSLDTGVPWVMCQQ 220 (523)
Q Consensus 194 ~~~~y~~~l~~~~~~~g~~vP~~~~~~ 220 (523)
.+.+|++.+-+.+++.+.+++++.++.
T Consensus 146 ~g~~~~~~a~~~ar~~dP~a~l~~nd~ 172 (302)
T d1nq6a_ 146 LGNGFIEEAFRTARTVDADAKLCYNDY 172 (302)
T ss_dssp HCTTHHHHHHHHHHHHCTTSEEEEEES
T ss_pred ccHHHHHHHHHHHHHhCCCCceeeccc
Confidence 245688999999999999999998764
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Probab=98.33 E-value=1.1e-06 Score=87.26 Aligned_cols=163 Identities=15% Similarity=0.054 Sum_probs=108.6
Q ss_pred CCeeEEEecceEEEC--CEEEEEEEEEeeCCCCCccch-HHHHHHHHh-CCCCEEEEccccCcCCCCCceeeccCcchHH
Q 009890 23 FGANVTYDHRAVVIG--GKRRVLISGSIHYPRSTPEMW-PDLIQKSKD-GGLDVIETYVFWNLHEPVRNQYNFEGRYDLV 98 (523)
Q Consensus 23 ~~~~vt~d~~~l~id--Gk~~~l~sG~iHy~R~~~~~W-~d~l~k~Ka-~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~ 98 (523)
+..-|+.+++.+++| |++++|.+-++|-+.+-++.+ ++.++.|++ .|+|+||+.+.+ |+.+..++=+....|+
T Consensus 15 ~~~~l~~~G~~~l~d~~G~~v~lrGv~~~~~~w~~~~~~~~~~~~l~~~~G~N~VRlp~~~---~~~~~~~~~~~~~~ld 91 (357)
T d1g01a_ 15 ALQLVELNGQLTLAGEDGTPVQLRGMSTHGLQWFGEIVNENAFVALSNDWGSNMIRLAMYI---GENGYATNPEVKDLVY 91 (357)
T ss_dssp SCEEEEETTEEEEECTTSCBCCCEEEEESCHHHHGGGCSHHHHHHHHTTSCCSEEEEEEES---SSSSTTTCTTHHHHHH
T ss_pred CCCeEEEcCeEEEECCCCCEEEEEEEecCcchhcccccCHHHHHHHHHhcCCCEEEEeeee---cCCCCccCHHHHHHHH
Confidence 346688999888884 999999999998543322222 467888875 799999998733 4555555544456799
Q ss_pred HHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEec
Q 009890 99 KFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILS 178 (523)
Q Consensus 99 ~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~ 178 (523)
++|+.|.++||||||-. | ..++. ..++...+...+++++|+++++.++- -.+|++
T Consensus 92 ~~V~~a~~~GiyVIlD~----H-------------~~~~~---~~~~~~~~~~~~~W~~iA~ry~~~~~-----~~~v~~ 146 (357)
T d1g01a_ 92 EGIELAFEHDMYVIVDW----H-------------VHAPG---DPRADVYSGAYDFFEEIADHYKDHPK-----NHYIIW 146 (357)
T ss_dssp HHHHHHHHTTCEEEEEE----E-------------CCSSS---CTTSGGGTTHHHHHHHHHHHHTTCTT-----GGGEEE
T ss_pred HHHHHHHHCCCEEEEee----c-------------ccCCC---CCChhhhhhhHHHHHHHHHHHhcCcc-----hHHHHH
Confidence 99999999999999965 1 11110 11223344556788999999986431 136889
Q ss_pred cccccccccccccC---------cccHHHHHHHHHHHHhcCCCc
Q 009890 179 QIENEYGNIDSAYG---------AAGKSYIKWAAGMALSLDTGV 213 (523)
Q Consensus 179 QIENEyg~~~~~~g---------~~~~~y~~~l~~~~~~~g~~v 213 (523)
.|=||.-....... ..-+.|.+.+.+..|+.+-..
T Consensus 147 el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IR~~~~~~ 190 (357)
T d1g01a_ 147 ELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKGDNM 190 (357)
T ss_dssp ECCSCCCSCCTTSCCCCSSHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHhhccccccCccccccCcchhHHHHHHHHHHHHHHHHhcCCce
Confidence 99999854321100 122567777777777776443
|
| >d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Clostridium thermocellum, XynZ [TaxId: 1515]
Probab=98.27 E-value=3.2e-07 Score=89.83 Aligned_cols=151 Identities=15% Similarity=0.260 Sum_probs=106.1
Q ss_pred EEEEEeeCCCCC-c-cchHHHHHHHHhCCCCEEEE--ccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCce
Q 009890 43 LISGSIHYPRST-P-EMWPDLIQKSKDGGLDVIET--YVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPY 118 (523)
Q Consensus 43 l~sG~iHy~R~~-~-~~W~d~l~k~Ka~GlN~V~t--YvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPy 118 (523)
.+++++|+.... . ..+++.+ ..-||.+.. -.-|...||+||+|||+ .++++++.|+++||.|...+ .
T Consensus 13 ~~G~~~~~~~~~~~d~~y~~~~----~~~fn~~t~~n~~kW~~iep~~G~~~~~---~~D~~v~~a~~~gi~v~gh~--l 83 (320)
T d1xyza_ 13 KIGTCVNYPFYNNSDPTYNSIL----QREFSMVVCENEMKFDALQPRQNVFDFS---KGDQLLAFAERNGMQMRGHT--L 83 (320)
T ss_dssp EEEEEECTHHHHTCCHHHHHHH----HHHCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHTTCEEEEEE--E
T ss_pred eEEEEechhhccCCCHHHHHHH----HHhCCeeeecccCchHHhCCCCCccChH---HHHHHHHHHHHCCCEEEeec--c
Confidence 589999986642 1 1233333 334888865 36799999999999999 78999999999999986443 1
Q ss_pred eccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccc-------c
Q 009890 119 VCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSA-------Y 191 (523)
Q Consensus 119 i~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~-------~ 191 (523)
+- ....|.|+...+ .+.+..++.+++|+++++++.+ |.|..|+|-||....... +
T Consensus 84 ~w----~~~~p~w~~~~~-----~~~~~~~~~~~~~i~~v~~ry~---------g~i~~WeV~NEp~~~~~~~~~~~~~~ 145 (320)
T d1xyza_ 84 IW----HNQNPSWLTNGN-----WNRDSLLAVMKNHITTVMTHYK---------GKIVEWDVANECMDDSGNGLRSSIWR 145 (320)
T ss_dssp EC----SSSCCHHHHTSC-----CCHHHHHHHHHHHHHHHHHHTT---------TTCSEEEEEESCBCTTSSSBCCCHHH
T ss_pred cc----CCCCCcchhccc-----cchHHHHHHHHHHHHHHHHHcC---------CCceeEEeecccccCCCccccCcHHh
Confidence 21 123688876432 1335567788899999988876 469999999997542110 0
Q ss_pred CcccHHHHHHHHHHHHhcCCCcceEEccC
Q 009890 192 GAAGKSYIKWAAGMALSLDTGVPWVMCQQ 220 (523)
Q Consensus 192 g~~~~~y~~~l~~~~~~~g~~vP~~~~~~ 220 (523)
...+.+|+..+.+.+++....+.++.+..
T Consensus 146 ~~~~~~~~~~a~~~a~~~dp~a~l~~n~~ 174 (320)
T d1xyza_ 146 NVIGQDYLDYAFRYAREADPDALLFYNDY 174 (320)
T ss_dssp HHHCTTHHHHHHHHHHHHCTTSEEEEEES
T ss_pred hhccHHHHHHHHHHHHHhccCcEEEeecc
Confidence 11234688889999999888887777654
|
| >d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]
Probab=98.25 E-value=6e-07 Score=88.21 Aligned_cols=150 Identities=17% Similarity=0.290 Sum_probs=105.8
Q ss_pred EEEEEeeCCCCCccchHHHHHHHHhCCCCEEEE--ccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceec
Q 009890 43 LISGSIHYPRSTPEMWPDLIQKSKDGGLDVIET--YVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVC 120 (523)
Q Consensus 43 l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~t--YvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~ 120 (523)
.++.+++..+......++.+++ -+|.+.. -.-|...||+||+|||+ .++++++.|+++||.|.-.+ -+
T Consensus 14 ~fG~a~~~~~l~~~~y~~~~~~----~fn~~t~en~~kW~~iEp~~G~~~~~---~~D~~v~~a~~~gl~v~gH~--lv- 83 (301)
T d1ta3b_ 14 YFGTCSDQALLQNSQNEAIVAS----QFGVITPENSMKWDALEPSQGNFGWS---GADYLVDYATQHNKKVRGHT--LV- 83 (301)
T ss_dssp EEEEEECHHHHHSHHHHHHHHH----HCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHTTCEEEEEE--EE-
T ss_pred eEEEeeChhhcCCHHHHHHHHH----hCCeecccccCcchhhCCCCCcCCcH---HHHHHHHHHHHCCCEEEEec--cc-
Confidence 3566665544322233444422 2888875 35599999999999999 89999999999999875432 22
Q ss_pred cccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccccccc------Ccc
Q 009890 121 AEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAY------GAA 194 (523)
Q Consensus 121 aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~------g~~ 194 (523)
|. ...|.|+.... +.+...+.++++++.++.+++ |.|-.|+|-||.-.....+ ...
T Consensus 84 --W~-~~~P~w~~~~~------~~~~~~~~~~~~I~~v~~rY~---------g~i~~WDVvNEp~~~~~~~~~~~~~~~~ 145 (301)
T d1ta3b_ 84 --WH-SQLPSWVSSIG------DANTLRSVMTNHINEVVGRYK---------GKIMHWDVVNEIFNEDGTFRNSVFYNLL 145 (301)
T ss_dssp --CS-SSCCHHHHTCC------CHHHHHHHHHHHHHHHHHHTT---------TSCSEEEEEESCBCTTSSBCCCHHHHHH
T ss_pred --cC-ccCchhhhccc------cHHHHHHHHHHHHHHHHHhcC---------CCcceEEeecccccCCCCcccchhhhcc
Confidence 42 35799987532 234556778888888887776 4688999999963322111 123
Q ss_pred cHHHHHHHHHHHHhcCCCcceEEccC
Q 009890 195 GKSYIKWAAGMALSLDTGVPWVMCQQ 220 (523)
Q Consensus 195 ~~~y~~~l~~~~~~~g~~vP~~~~~~ 220 (523)
+.+|+..+-+.|++.+.++++++++-
T Consensus 146 g~~~~~~af~~A~~~dP~a~l~~nd~ 171 (301)
T d1ta3b_ 146 GEDFVRIAFETARAADPDAKLYINDY 171 (301)
T ss_dssp TTHHHHHHHHHHHHHCTTSEEEEEES
T ss_pred chHHHHHHHHHHHHhCcCceeeeccc
Confidence 56899999999999999999998874
|
| >d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Streptomyces lividans [TaxId: 1916]
Probab=98.17 E-value=1.2e-06 Score=85.71 Aligned_cols=149 Identities=16% Similarity=0.256 Sum_probs=107.5
Q ss_pred EEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEc--cccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceec
Q 009890 43 LISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETY--VFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVC 120 (523)
Q Consensus 43 l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tY--vfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~ 120 (523)
.++.+++..+...+..++.+. .-+|.|..- .-|...||+||+|||+ .++++++.|+++||.|.-.+ -+
T Consensus 14 ~fG~av~~~~l~d~~y~~~~~----~~fn~~t~~n~~kW~~~ep~~g~~~~~---~~D~~v~~a~~~gi~v~gh~--l~- 83 (302)
T d1v0la_ 14 YFGTAIASGRLSDSTYTSIAG----REFNMVTAENEMKIDATEPQRGQFNFS---SADRVYNWAVQNGKQVRGHT--LA- 83 (302)
T ss_dssp EEEEEECGGGTTCHHHHHHHH----HHCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHTTCEEEEEE--EE-
T ss_pred eEEEecCccccCCHHHHHHHH----hhCCeeeecccCchhhhCCCCCcCChH---HHHHHHHHHHHCCCEEEEec--cc-
Confidence 468888887775444454443 358988654 6699999999999999 89999999999999885332 11
Q ss_pred cccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccc-------cCc
Q 009890 121 AEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSA-------YGA 193 (523)
Q Consensus 121 aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~-------~g~ 193 (523)
|. .-.|.|+... +.+...+.+++|+.+++.+.+ |-|..|+|=||....... +..
T Consensus 84 --w~-~~~p~w~~~~-------~~~~~~~~~~~~i~~~~~ry~---------g~i~~WdV~NEp~~~~~~~~~~~~~~~~ 144 (302)
T d1v0la_ 84 --WH-SQQPGWMQSL-------SGSALRQAMIDHINGVMAHYK---------GKIVQWDVVNEAFADGSSGARRDSNLQR 144 (302)
T ss_dssp --CS-SSCCHHHHTC-------CHHHHHHHHHHHHHHHHHHTT---------TTCSEEEEEECCBCSSSSCCBCCSHHHH
T ss_pred --cc-hhcccccccc-------CcHHHHHHHHHHHHHHHhhcC---------CCceEEEEecccccCCCCccccCccccc
Confidence 21 1257777542 345667888888888887776 468999999998432110 112
Q ss_pred ccHHHHHHHHHHHHhcCCCcceEEccC
Q 009890 194 AGKSYIKWAAGMALSLDTGVPWVMCQQ 220 (523)
Q Consensus 194 ~~~~y~~~l~~~~~~~g~~vP~~~~~~ 220 (523)
.+.+|++.+-++|++.+.++.++.++-
T Consensus 145 ~~~~~i~~a~~~ar~~dP~a~l~~n~~ 171 (302)
T d1v0la_ 145 SGNDWIEVAFRTARAADPSAKLCYNDY 171 (302)
T ss_dssp TCTTHHHHHHHHHHHHCTTSEEEEEES
T ss_pred chHHHHHHHHHHHHHhCCCCEEeecCc
Confidence 345788999999999998888888764
|
| >d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Ixt6 [TaxId: 1422]
Probab=98.15 E-value=1.9e-06 Score=85.18 Aligned_cols=154 Identities=14% Similarity=0.186 Sum_probs=107.3
Q ss_pred EEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEc--cccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCcee
Q 009890 42 VLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETY--VFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYV 119 (523)
Q Consensus 42 ~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tY--vfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi 119 (523)
|.+|.++++..... . ++.+++ =+|.+..- .-|...||+||+|||+ .++++++.|+++||.|.-.+ -|
T Consensus 15 f~~G~av~~~~~~~-~-~~~~~~----~fn~~t~~n~~kW~~iep~~g~~~~~---~~D~~v~~a~~~gi~v~gh~--lv 83 (330)
T d1n82a_ 15 FRIGAAVNPVTIEM-Q-KQLLID----HVNSITAENHMKFEHLQPEEGKFTFQ---EADRIVDFACSHRMAVRGHT--LV 83 (330)
T ss_dssp CEEEEEECHHHHHH-T-HHHHHH----HCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHTTCEEEEEE--EE
T ss_pred CcEEEEeChhhcch-H-HHHHHH----hcCccccccCCChHhhcCCCCccChH---HHHHHHHHHHHCCCEEEEee--cc
Confidence 46788886543321 1 233322 37777775 6699999999999999 89999999999999875332 11
Q ss_pred ccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccccc--------cc
Q 009890 120 CAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDS--------AY 191 (523)
Q Consensus 120 ~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~--------~~ 191 (523)
| ....|.|+...+.... .+.+..++.++++++.++++.+ |.|-.|+|=||...... .+
T Consensus 84 ---w-~~~~P~W~~~~~~~~~-~~~~~~~~~~~~~i~~v~~ry~---------g~v~~WdV~NEp~~~~~~~~~~~~~~~ 149 (330)
T d1n82a_ 84 ---W-HNQTPDWVFQDGQGHF-VSRDVLLERMKCHISTVVRRYK---------GKIYCWDVINEAVADEGDELLRPSKWR 149 (330)
T ss_dssp ---E-SSSCCGGGGBCSSSSB-CCHHHHHHHHHHHHHHHHHHHT---------TTCCEEEEEESCBCSSSSCSBCCCHHH
T ss_pred ---c-CCCCCchhccCCcCCc-CCHHHHHHHHHHHHHHHHHhcC---------CCceeEEEeccccccCccccccCChhh
Confidence 2 2357999976443211 2345678889999999988887 46999999999843211 01
Q ss_pred CcccHHHHHHHHHHHHhcCCCcceEEccC
Q 009890 192 GAAGKSYIKWAAGMALSLDTGVPWVMCQQ 220 (523)
Q Consensus 192 g~~~~~y~~~l~~~~~~~g~~vP~~~~~~ 220 (523)
...+.+|++.+-+.+++.+-++-++.+.-
T Consensus 150 ~~~~~~~~~~af~~ar~~~P~a~l~~n~~ 178 (330)
T d1n82a_ 150 QIIGDDFMEQAFLYAYEADPDALLFYNDY 178 (330)
T ss_dssp HHHCTTHHHHHHHHHHHHCTTSEEEEEES
T ss_pred hccChHHHHHHHHHHHHhCCcceEeeccc
Confidence 12345778888888999888888887654
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Probab=98.12 E-value=2.4e-06 Score=85.81 Aligned_cols=108 Identities=14% Similarity=0.097 Sum_probs=77.3
Q ss_pred HHHHHHHHhCCCCEEEEccccCcCC-CCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcccc-CCC
Q 009890 59 PDLIQKSKDGGLDVIETYVFWNLHE-PVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH-FIP 136 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~tYvfWn~HE-p~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~-~~p 136 (523)
++.|+.||++|||+||+.|.|..|. +.++.+|=+.-..+++.++.|.++||+|||-. |. .+.|.. ..+
T Consensus 64 ~~~i~~ik~~Gfn~vRiPv~w~~~~~~~~~~i~~~~l~~v~~vV~~a~~~Gl~VIldl----Hh------~~~~~~~~~~ 133 (380)
T d1edga_ 64 KQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVILNT----HH------DVDKVKGYFP 133 (380)
T ss_dssp HHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTTCEEEEEC----CS------CBCTTTSBCS
T ss_pred HHHHHHHHHcCCCEEEEcccHHHhcCCCCCccCHHHHHHHHHHHHHHHHcCCEEEEec----cc------CCCCCcccCC
Confidence 7899999999999999999999874 45677775544579999999999999999975 21 111111 111
Q ss_pred CeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 137 GIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 137 ~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
+- .+.+...+...++.++|++++|.+ ..++++.+=||...
T Consensus 134 ~~---~~~~~~~~~~~~~W~qiA~~fkd~-------~~~l~fel~NEP~~ 173 (380)
T d1edga_ 134 SS---QYMASSKKYITSVWAQIAARFANY-------DEHLIFEGMNEPRL 173 (380)
T ss_dssp SG---GGHHHHHHHHHHHHHHHHHHTTTC-------CTTEEEECCSSCCC
T ss_pred cc---cCcHHHHHHHHHHHHHHHHhhcCC-------CceEEEeecccccc
Confidence 10 123445566667777788877744 37899999999853
|
| >d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase 10c species: Cellvibrio japonicus [TaxId: 155077]
Probab=98.03 E-value=8.8e-06 Score=81.53 Aligned_cols=156 Identities=19% Similarity=0.230 Sum_probs=106.4
Q ss_pred EEEEEEeeCCCC------CccchHHHHHHHHhCCCCEEEE--ccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEE
Q 009890 42 VLISGSIHYPRS------TPEMWPDLIQKSKDGGLDVIET--YVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHL 113 (523)
Q Consensus 42 ~l~sG~iHy~R~------~~~~W~d~l~k~Ka~GlN~V~t--YvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vil 113 (523)
|.+++++.+... ....-.+.|+ .-+|.|.. -.-|...||+||+|||+ .++++++.|+++||.|.-
T Consensus 17 f~~G~av~~~~~~~~~~~~~~~~~~~~~----~~fn~~t~eN~mKW~~iep~~G~~nf~---~~D~~v~~a~~~gi~v~G 89 (364)
T d1us3a2 17 FPIGVAVSNTDSATYNLLTNSREQAVVK----KHFNHLTAGNIMKMSYMQPTEGNFNFT---NADAFVDWATENNMTVHG 89 (364)
T ss_dssp CCEEEEEBCTTCTTTBTTTCHHHHHHHH----HHCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHTTCEEEE
T ss_pred CcEEEEecCccccccccccCHHHHHHHH----HhCCeeeecccCChHHhcCCCCccCcH---HHHHHHHHHHHCCCEEEE
Confidence 457888876532 2232333333 34999977 46699999999999999 899999999999999753
Q ss_pred ecCceeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccc---
Q 009890 114 RIGPYVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSA--- 190 (523)
Q Consensus 114 r~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~--- 190 (523)
.+ -+-. .....|.|+...+. +.+..++.++++++.++.+++.. |-|..|+|-||.-.....
T Consensus 90 H~--lvW~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~I~~vv~ry~~~-------G~I~~WDVvNEp~~~~~~~~~ 153 (364)
T d1us3a2 90 HA--LVWH--SDYQVPNFMKNWAG-----SAEDFLAALDTHITTIVDHYEAK-------GNLVSWDVVNEAIDDNSPANF 153 (364)
T ss_dssp EE--EEEC--CGGGSCHHHHTCCS-----CHHHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEEECCBCSSSSCCB
T ss_pred ee--cCCC--cccCCccccccCCc-----cHHHHHHHHHHHHHHHHHhhccC-------CceEEEEEecccccCCCCccc
Confidence 22 1100 11235666654321 34567788999999999998832 579999999997321100
Q ss_pred -------cC--cccHHHHHHHHHHHHhcCCCcceEEccC
Q 009890 191 -------YG--AAGKSYIKWAAGMALSLDTGVPWVMCQQ 220 (523)
Q Consensus 191 -------~g--~~~~~y~~~l~~~~~~~g~~vP~~~~~~ 220 (523)
+. ..+..|+..+-+.|++...++.++.++-
T Consensus 154 ~~~~~~~~~~~g~~~~~i~~Af~~Ar~~~p~a~l~~ndy 192 (364)
T d1us3a2 154 RTTDSAFYVKSGNSSVYIERAFQTARAADPAVILYYNDY 192 (364)
T ss_dssp CCTTCHHHHHTTSCSHHHHHHHHHHHHHCTTSEEEEEES
T ss_pred ccccchHHHHhCCchHHHHHHHHHHHHhccccceeeccc
Confidence 00 1234588888899998888888887764
|
| >d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Thermoascus aurantiacus [TaxId: 5087]
Probab=98.01 E-value=3.3e-06 Score=83.08 Aligned_cols=150 Identities=21% Similarity=0.320 Sum_probs=106.2
Q ss_pred EEEEeeCCCCCccchHHHHHHHHhCCCCEEEEc--cccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceecc
Q 009890 44 ISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETY--VFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCA 121 (523)
Q Consensus 44 ~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tY--vfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~a 121 (523)
++..+...+.....-.+.+++- +|.|..- .=|...||+||+|||+ .++++++.|+++||.|.-. +-|
T Consensus 18 fG~a~~~~~l~~~~~~~~~~~~----fn~~t~eN~~KW~~~ep~~G~~~~~---~~D~~v~~a~~~gi~vrGH--~lv-- 86 (303)
T d1i1wa_ 18 FGVATDQNRLTTGKNAAIIQAN----FGQVTPENSMKWDATEPSQGNFNFA---GADYLVNWAQQNGKLIRGH--TLV-- 86 (303)
T ss_dssp EEEEECHHHHTSTTHHHHHHHH----CSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHHTCEEEEE--EEE--
T ss_pred EEEEeChhhccCHHHHHHHHHh----CCcccccccCcchhhcCCCCccChH---HHHHHHHHHHHCCCEEEEe--eee--
Confidence 5777766554434445544332 8888763 4499999999999999 8999999999999986422 222
Q ss_pred ccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccc------cCccc
Q 009890 122 EWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSA------YGAAG 195 (523)
Q Consensus 122 Ew~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~------~g~~~ 195 (523)
|. ...|.|+...+ +.+...+.++++++.++.+.+ |-|..|+|-||.-..... +..-+
T Consensus 87 -W~-~~~P~W~~~~~------~~~~~~~~~~~~i~~v~~rY~---------g~i~~WdVvNE~~~~~~~~r~~~~~~~~g 149 (303)
T d1i1wa_ 87 -WH-SQLPSWVSSIT------DKNTLTNVMKNHITTLMTRYK---------GKIRAWDVVNEAFNEDGSLRQTVFLNVIG 149 (303)
T ss_dssp -CS-TTCCHHHHTCC------CHHHHHHHHHHHHHHHHHHTT---------TSCSEEEEEESCBCTTSSBCCCHHHHHTC
T ss_pred -ec-CcCchhhhccc------ccHHHHHHHHHHHHHHHHHcC---------CCCchhhhcccccCCCcccccCchhhccc
Confidence 22 34799986532 224456778888888877776 468999999997432111 11235
Q ss_pred HHHHHHHHHHHHhcCCCcceEEccCC
Q 009890 196 KSYIKWAAGMALSLDTGVPWVMCQQS 221 (523)
Q Consensus 196 ~~y~~~l~~~~~~~g~~vP~~~~~~~ 221 (523)
.+|+..+-+.|++...++.++.++-.
T Consensus 150 ~d~i~~af~~Ar~~dP~a~L~~Ndy~ 175 (303)
T d1i1wa_ 150 EDYIPIAFQTARAADPNAKLYINDYN 175 (303)
T ss_dssp TTHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred HHHHHHHHHHHHHhCCCCEEEeecCc
Confidence 67999999999999999999988753
|
| >d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Barley (Hordeum vulgare) [TaxId: 4513]
Probab=97.95 E-value=1.1e-05 Score=83.38 Aligned_cols=146 Identities=20% Similarity=0.317 Sum_probs=95.5
Q ss_pred CccchHHHHHHHHhCCCCEEEEccccCcCCC-CCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCC----CC
Q 009890 54 TPEMWPDLIQKSKDGGLDVIETYVFWNLHEP-VRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFG----GF 128 (523)
Q Consensus 54 ~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp-~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~G----G~ 128 (523)
.++.-+..|+++|++|++.|.+.|-|...|. .|++|||+| -.+++++++++||++.+-.-=--|+-=-.. -+
T Consensus 25 ~~~~l~~~L~~LK~~GVdGVmvDvWWGiVE~~~P~~YdWsg---Y~~l~~mvr~~GLKlq~vmSFHqCGGNVGD~v~IPL 101 (500)
T d1b1ya_ 25 KGDELRAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYDWSA---YKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIPI 101 (500)
T ss_dssp THHHHHHHHHHHHHTTCCEEEEEEETTTGGGGSTTCCCCHH---HHHHHHHHHHHTCEEEEEEECSCBSSSTTCCSCBCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeeeeeeecCCCCccCcHH---HHHHHHHHHHcCCeEEEEEeecccCCCCCCccccCC
Confidence 3455677899999999999999999999998 599999996 567799999999996543322223221111 27
Q ss_pred CccccC----CCCeeeecC-------------------------ChhHHHHHHHHHHHHHHHHHhcccccccCCceEecc
Q 009890 129 PLWLHF----IPGIQFRTD-------------------------NEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQ 179 (523)
Q Consensus 129 P~WL~~----~p~i~~Rt~-------------------------d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~Q 179 (523)
|.|+.+ +|+|.+ || =+.|.+.|+.|-..+.+.+. +|-|.-+|
T Consensus 102 P~WV~~~~~~dpDi~f-tDr~G~rn~E~LSlg~D~~pvl~GRTplq~Y~DFm~SFr~~F~~~~~--------~~~I~eI~ 172 (500)
T d1b1ya_ 102 PQWVRDVGTRDPDIFY-TDGHGTRNIEYLTLGVDNQPLFHGRSAVQMYADYMTSFRENMKDFLD--------AGVIVDIE 172 (500)
T ss_dssp CHHHHHHHHHCGGGEE-ECTTCCEEEEEECGGGTTCCTTTSCCHHHHHHHHHHHHHHHHHHHHH--------HTCEEEEE
T ss_pred cHHHHHhhccCCCeEE-ECCCCCcCcceeccccccccccCCCcHHHHHHHHHHHHHHHHHHhcc--------CCeEEEEE
Confidence 999964 577633 22 13466667666666665554 46788888
Q ss_pred ccc------cccccc----ccc---C--cccHHH-HHHHHHHHHhcCC
Q 009890 180 IEN------EYGNID----SAY---G--AAGKSY-IKWAAGMALSLDT 211 (523)
Q Consensus 180 IEN------Eyg~~~----~~~---g--~~~~~y-~~~l~~~~~~~g~ 211 (523)
|.= -|=++. +.| | +|-.+| ++.|++.|.+.|-
T Consensus 173 VGlGP~GELRYPSYp~~~Gw~yPGiGEFQCYDky~~~~Lk~aA~~~G~ 220 (500)
T d1b1ya_ 173 VGLGPAGELRYPSYPQSHGWSFPGIGEFICYDKYLQADFKAAAAAVGH 220 (500)
T ss_dssp ECCSGGGBSSCCCSCGGGTCCTTCCCCCCCCSHHHHHHHHHHHHHTTC
T ss_pred eCcccCcCccCCCCccccCCcCCCcceeeeCcHHHHHHHHHHHHHcCC
Confidence 732 222221 111 1 243455 5678888877544
|
| >d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=97.92 E-value=5.6e-06 Score=85.46 Aligned_cols=116 Identities=24% Similarity=0.429 Sum_probs=80.7
Q ss_pred CccchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCC----CC
Q 009890 54 TPEMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFG----GF 128 (523)
Q Consensus 54 ~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~G----G~ 128 (523)
.++.-+..|+++|++|++.|.+.|-|...|.. |++|||+| -.+++++++++||++.+-.-=--|+-=-.. -+
T Consensus 32 ~~~~l~~~L~~LK~~GVdGVmvDvWWGiVE~~~P~~YdWsg---Y~~l~~mvr~~GLKlq~vmSFHqCGGNVGD~v~IPL 108 (498)
T d1fa2a_ 32 DKEKVEDELKQVKAGGCDGVMVDVWWGIIEAKGPKQYDWSA---YRELFQLVKKCGLKIQAIMSFHQCGGNVGDAVFIPI 108 (498)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEEHHHHTCSBTTBCCCHH---HHHHHHHHHHTTCEEEEEEECSCBCCCTTCCCCBCS
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeeeeeEeecCCCCccCcHH---HHHHHHHHHHcCCeeEEEEeecccCCCCCCccccCC
Confidence 45556778999999999999999999999985 99999996 567799999999996543321223221111 27
Q ss_pred CccccC----CCCeeeecC-------------------------ChhHHHHHHHHHHHHHHHHHhcccccccCCceEecc
Q 009890 129 PLWLHF----IPGIQFRTD-------------------------NEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQ 179 (523)
Q Consensus 129 P~WL~~----~p~i~~Rt~-------------------------d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~Q 179 (523)
|.|+.+ +|+|.+ || =+.|.+.|+.|-..+.+.+. +|-|.-+|
T Consensus 109 P~WV~~~g~~~pDi~f-tDr~G~rn~EyLSl~~D~~pvl~GRTplq~Y~DFm~SFr~~F~~~l~--------~g~I~eI~ 179 (498)
T d1fa2a_ 109 PQWILQIGDKNPDIFY-TNRAGNRNQEYLSLGVDNQRLFQGRTALEMYRDFMESFRDNMADFLK--------AGDIVDIE 179 (498)
T ss_dssp CHHHHHHTTTCGGGEE-ECTTCCEEEEEECGGGTTCEEETTEEHHHHHHHHHHHHHHHSHHHHH--------HTCEEEEE
T ss_pred cHHHHhhhccCCCceE-EcCCCCcccceeeeecccccccCCCCHHHHHHHHHHHHHHHHHHhcc--------CCceEEEE
Confidence 999964 577633 22 13566666666666655554 45788888
Q ss_pred cc
Q 009890 180 IE 181 (523)
Q Consensus 180 IE 181 (523)
|.
T Consensus 180 VG 181 (498)
T d1fa2a_ 180 VG 181 (498)
T ss_dssp EC
T ss_pred ec
Confidence 73
|
| >d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Cellvibrio mixtus [TaxId: 39650]
Probab=97.84 E-value=1.2e-05 Score=80.64 Aligned_cols=157 Identities=17% Similarity=0.207 Sum_probs=108.4
Q ss_pred EEEEEEeeCCCCC--ccchHHHHHHHHhCCCCEEEEc--cccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCc
Q 009890 42 VLISGSIHYPRST--PEMWPDLIQKSKDGGLDVIETY--VFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGP 117 (523)
Q Consensus 42 ~l~sG~iHy~R~~--~~~W~d~l~k~Ka~GlN~V~tY--vfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GP 117 (523)
|++++.+.+.... ....++.|. .=+|.|..- .-|...||+||+|||+ .++++++.|+++||.|--. +
T Consensus 10 F~~G~av~~~~~~~~~~~y~~~~~----~~Fn~~t~eN~~KW~~ie~~~G~~~~~---~~D~~v~~a~~~gi~vrGH--~ 80 (350)
T d1ur1a_ 10 FLIGAALNATIASGADERLNTLIA----KEFNSITPENCMKWGVLRDAQGQWNWK---DADAFVAFGTKHNLHMVGH--T 80 (350)
T ss_dssp CEEEEEECHHHHTTCCHHHHHHHH----HHCSEEEESSTTSHHHHBCTTCCBCCH---HHHHHHHHHHHTTCEEEEE--E
T ss_pred CceEEEechhhccCCCHHHHHHHH----HHcCeecccccCchhhhcCCCCccChH---HHHHHHHHHHHCCCEEEEE--E
Confidence 4678877654332 223444442 357877653 4599999999999998 8999999999999986311 1
Q ss_pred eeccccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccc------c
Q 009890 118 YVCAEWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSA------Y 191 (523)
Q Consensus 118 yi~aEw~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~------~ 191 (523)
.| | ....|.|+...+.. -..+.+...+.++++++.++.+.+ |.|..|.|-||--..... +
T Consensus 81 Lv---W-~~~~P~w~~~~~~~-~~~~~~~l~~~~~~~I~~v~~ry~---------g~i~~WDVvNE~~~~~~~~~~~~~~ 146 (350)
T d1ur1a_ 81 LV---W-HSQIHDEVFKNADG-SYISKAALQKKMEEHITTLAGRYK---------GKLAAWDVVNEAVGDDLKMRDSHWY 146 (350)
T ss_dssp EE---C-SSSSCGGGTBCTTS-CBCCHHHHHHHHHHHHHHHHHHTT---------TTCSEEEEEECCBCTTSSBCCCHHH
T ss_pred EE---E-cccccccccccCCc-cccCHHHHHHHHHHHHHHHHHhcC---------CcceEEEEecccccCCCCcccchhh
Confidence 11 2 23579998764321 112334567778888888877776 578999999996321111 1
Q ss_pred CcccHHHHHHHHHHHHhcCCCcceEEccCC
Q 009890 192 GAAGKSYIKWAAGMALSLDTGVPWVMCQQS 221 (523)
Q Consensus 192 g~~~~~y~~~l~~~~~~~g~~vP~~~~~~~ 221 (523)
..-|..|+..+-+.|++...++-++.++-.
T Consensus 147 ~~~G~~~i~~af~~Ar~~dP~akL~~Ndyn 176 (350)
T d1ur1a_ 147 KIMGDDFIYNAFTLANEVDPKAHLMYNDYN 176 (350)
T ss_dssp HHHTTHHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred hhcCcHHHHHHHHHHHhhCCCceEeecccc
Confidence 234678999999999999999999998753
|
| >d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Soybean (Glycine max) [TaxId: 3847]
Probab=97.79 E-value=1.2e-05 Score=82.69 Aligned_cols=145 Identities=19% Similarity=0.314 Sum_probs=93.3
Q ss_pred CccchHHHHHHHHhCCCCEEEEccccCcCCC-CCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccc----cCCCCC
Q 009890 54 TPEMWPDLIQKSKDGGLDVIETYVFWNLHEP-VRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAE----WNFGGF 128 (523)
Q Consensus 54 ~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp-~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aE----w~~GG~ 128 (523)
.++.-+..|+++|++|++.|.+.|-|...|. .|++|||+| -.+++++++++||++.+-.-=--|+- .-+=-+
T Consensus 26 ~~~~l~~~L~~LK~~GVdGVmvDvWWGiVE~~~P~~YdWsg---Y~~l~~mvr~~GLKlq~vmSFHqCGGNvGD~~~IPL 102 (490)
T d1wdpa1 26 DPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRA---YRSLLQLVQECGLTLQAIMSFHQCGGNVGDIVNIPI 102 (490)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHH---HHHHHHHHHHTTCEEEEEEECSCBCCSTTCSCCBCS
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeeeeeEeecCCCCccChHH---HHHHHHHHHHcCCeEEEEEeecccCCCCCcccccCC
Confidence 3445677899999999999999999999998 599999996 56779999999999754321122221 111127
Q ss_pred CccccC----CCCeeeecC-------------------------ChhHHHHHHHHHHHHHHHHHhcccccccCCceEecc
Q 009890 129 PLWLHF----IPGIQFRTD-------------------------NEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQ 179 (523)
Q Consensus 129 P~WL~~----~p~i~~Rt~-------------------------d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~Q 179 (523)
|.|+.+ +|+|.+ || =+.|.+.|+.|-..+.+.+. +|-|.-+|
T Consensus 103 P~WV~~~g~~~pDi~f-tDr~G~rn~E~lSl~~D~~pvl~GRTplq~Y~DFm~SFr~~F~~~~~--------~g~I~eI~ 173 (490)
T d1wdpa1 103 PQWVLDIGESNHDIFY-TNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFRENMSDFLE--------SGLIIDIE 173 (490)
T ss_dssp CHHHHHHHHHCGGGEE-ECTTCCEEEEEECGGGTTCCCBTTBCHHHHHHHHHHHHHHHTHHHHH--------TTCEEEEE
T ss_pred cHHHHhhhccCCCcee-ecCCCCcccceeeeeeccccccCCCcHHHHHHHHHHHHHHHHHHhcc--------CCeEEEEE
Confidence 999963 677633 22 12366666666555555543 56788888
Q ss_pred cccc------ccccc----ccc---C--cccHHHH-HHHHHHHHhcC
Q 009890 180 IENE------YGNID----SAY---G--AAGKSYI-KWAAGMALSLD 210 (523)
Q Consensus 180 IENE------yg~~~----~~~---g--~~~~~y~-~~l~~~~~~~g 210 (523)
|.== |-++. +.| | +|-.+|| +.|++.|++.|
T Consensus 174 VGlGP~GELRYPSYp~~~Gw~yPGiGEFQCYDky~~~~l~~aA~~~G 220 (490)
T d1wdpa1 174 VGLGPAGELRYPSYPQSQGWEFPGIGEFQCYDKYLKADFKAAVARAG 220 (490)
T ss_dssp ECCSGGGBSSCCCSCGGGTCCTTCCCCCCCCSHHHHHHHHHHHHHTT
T ss_pred eccccCccccCCCCccccCCcCCCcceeeeCCHHHHHHHHHHHHHhC
Confidence 7421 11110 011 1 2445564 56888888766
|
| >d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermus thermophilus [TaxId: 274]
Probab=97.75 E-value=9.6e-06 Score=83.14 Aligned_cols=109 Identities=16% Similarity=0.157 Sum_probs=89.8
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++|+.||++|+|+.|.-+-|.-.+|. +|++|-+|..-.+++|+.|.++||..++-. -.-++|.||.+
T Consensus 54 ~~y~eDi~ll~~lG~~~yRfsi~WsRI~P~g~g~~n~~gl~~Y~~~i~~l~~~GI~P~VTL--------~Hfd~P~~l~~ 125 (426)
T d1ug6a_ 54 RRYEEDIALMQSLGVRAYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTL--------YHWDLPLALEE 125 (426)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHHT
T ss_pred hhhHHHHHHHHHcCCCEEEccCCHHHcccCCCCCcChHHHHHHHHHHHHHHHcCCeEEEEe--------cccccchhhhc
Confidence 358999999999999999999999999998 999999998899999999999999988776 46789999987
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccc
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg 185 (523)
.-|- .++...++..+|.+.+++.++++ |-.|.-=||..
T Consensus 126 ~gGw----~~~~~~~~F~~Ya~~v~~~fgd~---------V~~w~TiNEP~ 163 (426)
T d1ug6a_ 126 RGGW----RSRETAFAFAEYAEAVARALADR---------VPFFATLNEPW 163 (426)
T ss_dssp TTGG----GSHHHHHHHHHHHHHHHHHHTTT---------CCEEEEEECHH
T ss_pred cCcc----CCHHHHHHHHHHHHHHHHHhCcc---------cceEEEecCCe
Confidence 6553 45667777777777777777643 34555568864
|
| >d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermotoga maritima [TaxId: 2336]
Probab=97.72 E-value=1.5e-05 Score=81.99 Aligned_cols=109 Identities=15% Similarity=0.184 Sum_probs=86.4
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++|+.||++|+|+.|+-+-|.-.+|. +|++|-+|....+++|+.|.++||..++-. -.-.+|.||.+
T Consensus 57 ~~y~eDi~l~~~lG~~~yRfsi~WsRi~P~g~g~~n~~~~~~Y~~~i~~l~~~GI~P~VTL--------~Hf~~P~wl~~ 128 (443)
T d2j78a1 57 NRWKEDIEIIEKLGVKAYRFSISWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTI--------YHWDLPFALQL 128 (443)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHHT
T ss_pred hhhHHHHHHHHHcCCCEEEccCCHHHceeCCCCCcCHHHHHHHHHHHHHHHHcCCeeeEee--------cCccchhhhhh
Confidence 348999999999999999999999999998 699999998899999999999999988766 45679999987
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccc
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg 185 (523)
..|- .|+...++..+|.+.+++.+.+. |=.|---||..
T Consensus 129 ~gGw----~~~~~v~~F~~Ya~~v~~~~gd~---------V~~w~TiNEP~ 166 (443)
T d2j78a1 129 KGGW----ANREIADWFAEYSRVLFENFGDR---------VKNWITLNEPW 166 (443)
T ss_dssp TTGG----GSTTHHHHHHHHHHHHHHHHTTT---------CCEEEEEECHH
T ss_pred cCCc----cChHHHHHHHHHHHHHHHHhCcc---------ccceEeccCce
Confidence 5552 34556666667777777777632 33455556653
|
| >d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Xt6 [TaxId: 1422]
Probab=97.67 E-value=7e-05 Score=75.60 Aligned_cols=157 Identities=19% Similarity=0.257 Sum_probs=105.7
Q ss_pred EEEEEEeeCCCCCccchHHHHHHHHhCCCCEEEEc--cccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCcee
Q 009890 42 VLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETY--VFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYV 119 (523)
Q Consensus 42 ~l~sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tY--vfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi 119 (523)
|.++.++.+....-+...+.|. .-+|.|..- .-|...||+||+|||+ ..+++++.|+++||.|.-.+ .|
T Consensus 20 f~~G~av~~~~l~~~~~~~~~~----~~Fn~~t~eN~mKW~~iep~~G~~n~~---~aD~~v~~a~~ngi~vrGH~--Lv 90 (371)
T d1r85a_ 20 FTIGAAVEPYQLQNEKDVQMLK----RHFNSIVAENVMKPISIQPEEGKFNFE---QADRIVKFAKANGMDIRFHT--LV 90 (371)
T ss_dssp CEEEEEECGGGGGCHHHHHHHH----HHCSEEEESSTTSHHHHCSBTTBCCCH---HHHHHHHHHHHTTCEEEEEC--SC
T ss_pred CeEEEecChhhcCCHHHHHHHH----HhcCeecccccCcchhhcCCCCccCcH---HHHHHHHHHHHCCCEEEEeE--EE
Confidence 4578888776553333333332 249988653 5599999999999999 89999999999999984322 22
Q ss_pred ccccCCCCCCccccCCCCee-eecC---------ChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccccc
Q 009890 120 CAEWNFGGFPLWLHFIPGIQ-FRTD---------NEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDS 189 (523)
Q Consensus 120 ~aEw~~GG~P~WL~~~p~i~-~Rt~---------d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~ 189 (523)
|. ...|.|+...+... .+.. .+..++.++++++.++.+.+ |-|-.|.|=||.-....
T Consensus 91 ---W~-~~~P~W~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~~I~~v~~rY~---------g~I~~WDVvNE~~~~~~ 157 (371)
T d1r85a_ 91 ---WH-SQVPQWFFLDKEGKPMVNETDPVKREQNKQLLLKRLETHIKTIVERYK---------DDIKYWDVVNEVVGDDG 157 (371)
T ss_dssp ---CS-TTCCGGGGBCTTSSBGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHT---------TTCCEEEEEESCBCTTS
T ss_pred ---ee-cccccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHcC---------CCceEEEEEeecccCCC
Confidence 32 36899996533211 2111 23456778888888888776 47999999999632111
Q ss_pred c------cCcccHHHHHHHHHHHHhc-CCCcceEEccC
Q 009890 190 A------YGAAGKSYIKWAAGMALSL-DTGVPWVMCQQ 220 (523)
Q Consensus 190 ~------~g~~~~~y~~~l~~~~~~~-g~~vP~~~~~~ 220 (523)
. +...+.+|+..+-+.|++. .-.+-++.++.
T Consensus 158 ~~r~~~~~~~~g~dyi~~af~~A~~~~~p~~~L~~Ndy 195 (371)
T d1r85a_ 158 KLRNSPWYQIAGIDYIKVAFQAARKYGGDNIKLYMNDY 195 (371)
T ss_dssp SBCCCHHHHHHTTHHHHHHHHHHHHHHCTTSEEEEEES
T ss_pred CcccCchhhccCcHHHHHHHHHHHHhcCCcceeeeccc
Confidence 1 1234678998888888875 45666777764
|
| >d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus polymyxa [TaxId: 1406]
Probab=97.67 E-value=1.3e-05 Score=82.67 Aligned_cols=109 Identities=17% Similarity=0.140 Sum_probs=91.4
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++|+.||++|+|+.|.-+-|.-.+|. +|++|-+|-.-.+++|+.|.++||..++-. -.-++|.||.+
T Consensus 58 ~~y~eDi~l~~~lG~~~yRfSi~WsRI~P~g~g~~n~~gl~~Y~~~i~~l~~~gI~P~VTL--------~H~dlP~~l~~ 129 (447)
T d1e4ia_ 58 HRYEEDIRLMKELGIRTYRFSVSWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTL--------YHWDLPQALQD 129 (447)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHHH
T ss_pred HhhHHHHHHHHHhCCCEEEccCCHHHcccCCCCCcCHHHHHHHHHHHHHHHHhCCeEEEEe--------eccccchhhhc
Confidence 458999999999999999999999999998 699999998899999999999999988766 35679999987
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccc
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg 185 (523)
..|- .|+...++..+|.+.+++.+.+ -|-.|.-=||..
T Consensus 130 ~gGw----~n~~~~~~F~~Ya~~v~~~fgd---------rV~~W~TiNEP~ 167 (447)
T d1e4ia_ 130 AGGW----GNRRTIQAFVQFAETMFREFHG---------KIQHWLTFNEPW 167 (447)
T ss_dssp TTTT----SSTHHHHHHHHHHHHHHHHTBT---------TBCEEEEEECHH
T ss_pred CCCC----CCHHHHHHHHHHHHHHHHHhCC---------ccceEEecCCCc
Confidence 6664 4666777777777777777763 367788888864
|
| >d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Streptomyces sp. [TaxId: 1931]
Probab=97.66 E-value=3.5e-05 Score=79.74 Aligned_cols=108 Identities=14% Similarity=0.149 Sum_probs=89.9
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++|+.||++|+|+-|+-+.|.-.+|. +|++|-+|-.--+++|+.|.++||..++-. -.-.+|.||.+
T Consensus 57 ~~y~eDi~l~~~lG~~~yRfSi~WsRI~P~g~g~~n~~gl~~Y~~~i~~l~~~GI~P~VTL--------~HfdlP~~l~~ 128 (464)
T d1gnxa_ 57 HRWREDVALMAELGLGAYRFSLAWPRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATL--------YHWDLPQELEN 128 (464)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCHHHHSGGGSSSCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHHH
T ss_pred hhhHHHHHHHHHcCCCEEEccCCHHHcccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEE--------ecCccHHHHhh
Confidence 348999999999999999999999999998 899999998899999999999999988765 45689999876
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccc
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEY 184 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEy 184 (523)
.-|- .|+...++..+|.+.+++.+.+. |-.|--=||.
T Consensus 129 ~gGW----~n~~~v~~F~~YA~~v~~~fgd~---------Vk~W~T~NEP 165 (464)
T d1gnxa_ 129 AGGW----PERATAERFAEYAAIAADALGDR---------VKTWTTLNEP 165 (464)
T ss_dssp TTCT----TSTHHHHHHHHHHHHHHHHHTTT---------CCEEEEEECH
T ss_pred hCCC----CCHHHHHHHHHHHHHHHHHhccc---------cceeEEccCc
Confidence 5553 46777777788888888888742 5566667775
|
| >d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.60 E-value=2.1e-05 Score=80.75 Aligned_cols=108 Identities=19% Similarity=0.285 Sum_probs=82.0
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFI 135 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~ 135 (523)
..|+++|+.||++|+|+.|.-+-|.-.+|.+|++|.+|-.--+++|+.+.++||..++-. -.-.+|.||.+.
T Consensus 50 ~ry~eDi~ll~~lG~~~yRfSisWsRI~P~~g~~n~~gl~~Y~~~i~~l~~~gI~P~VTL--------~H~d~P~~l~~~ 121 (423)
T d1vffa1 50 ELYRDDIQLMTSLGYNAYRFSIEWSRLFPEENKFNEDAFMKYREIIDLLLTRGITPLVTL--------HHFTSPLWFMKK 121 (423)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCHHHHCSBTTBCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHHHT
T ss_pred HhhHHHHHHHHHhCCCEEEecCcHHHeecCCCccChHHHHHHHHHHHHHHhcCCeeEEee--------cCCcchHHHHhh
Confidence 568999999999999999999999999999999999998889999999999999988766 355789999765
Q ss_pred CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccc
Q 009890 136 PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185 (523)
Q Consensus 136 p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg 185 (523)
.|- .++...++..+|.+.+.+... -|-.|.-=||..
T Consensus 122 gGw----~~~~~v~~F~~Ya~~~~~~~d----------~Vk~W~T~NEP~ 157 (423)
T d1vffa1 122 GGF----LREENLKHWEKYIEKVAELLE----------KVKLVATFNEPM 157 (423)
T ss_dssp TGG----GSGGGHHHHHHHHHHHHHHTT----------TCCEEEEEECHH
T ss_pred hhc----cCHHHHHHHHHHHHHHHHhhc----------ccceeeccCCcc
Confidence 443 234444444555444433221 244566667754
|
| >d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
Probab=97.56 E-value=3e-05 Score=79.93 Aligned_cols=110 Identities=15% Similarity=0.073 Sum_probs=90.9
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++|+.||++|+|+-|.-+-|.-.+|. +|++|=+|-.-.+++|+.|.++||..++-. -.-.+|.||.+
T Consensus 58 ~~y~eDi~l~~~lG~~~yRfSi~WsRi~P~g~g~~n~~~~~~Y~~~i~~l~~~gi~P~vTL--------~H~d~P~~l~~ 129 (449)
T d1qoxa_ 58 HRVEEDVQLLKDLGVKVYRFSISWPRVLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTL--------YHWDLPQALQD 129 (449)
T ss_dssp SCHHHHHHHHHHHTCSEEEEECCHHHHSTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHHT
T ss_pred hhhHHHHHHHHHcCCCEEEccCCHHHcccCCCCCcCHHHHHHHHHHHHHHHhcCCeEEEEE--------ecccccchhcc
Confidence 458999999999999999999999999999 699999999999999999999999988766 35678999987
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccc
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGN 186 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~ 186 (523)
..|- .|+...++-.+|.+.+++.+.+ -|-.|.-=||...
T Consensus 130 ~gGw----~~~~~~~~F~~Ya~~v~~~fgd---------~V~~W~T~NEP~~ 168 (449)
T d1qoxa_ 130 QGGW----GSRITIDAFAEYAELMFKELGG---------KIKQWITFNEPWC 168 (449)
T ss_dssp TTGG----GSTHHHHHHHHHHHHHHHHHTT---------TCCEEEEEECHHH
T ss_pred ccCc----CCHHHHHHHHHHHHHHHHHhcc---------cccceEEecCcce
Confidence 6663 3566667777777777777763 3667777888643
|
| >d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Thioglucosidase species: Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]
Probab=97.37 E-value=5.3e-05 Score=78.27 Aligned_cols=108 Identities=12% Similarity=0.141 Sum_probs=86.8
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC--CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCcccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV--RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLH 133 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~--~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~ 133 (523)
..|+++|+.||++|+|+-|+-+-|.-.+|. +|++|=+|-.--+++|+.|.++||..++-. -.-.+|.||.
T Consensus 57 ~ry~eDi~l~~~lG~~~yRfSi~WsRI~P~G~~g~~n~~gl~~Y~~~i~~l~~~GI~P~vTL--------~Hfd~P~~l~ 128 (462)
T d1wcga1 57 HKYKEDVAIIKDLNLKFYRFSISWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTM--------YHWDLPQYLQ 128 (462)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCHHHHSTTSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHHH
T ss_pred hhhHHHHHHHHHhCCCEEEeeCcHHHcccCCCCCCcCHHHHHHHHHHHHHHHhcCCeeEEEe--------ccccchhhhh
Confidence 458999999999999999999999999998 899999998899999999999999988766 3557999998
Q ss_pred CCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccc
Q 009890 134 FIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEY 184 (523)
Q Consensus 134 ~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEy 184 (523)
+.-|- .|+...++..+|.+.+++.+.+. |-.|.-=||.
T Consensus 129 ~~GGW----~~~~~v~~F~~Ya~~v~~~fgd~---------V~~W~T~NEP 166 (462)
T d1wcga1 129 DLGGW----VNPIMSDYFKEYARVLFTYFGDR---------VKWWITFNEP 166 (462)
T ss_dssp HTTGG----GSTTHHHHHHHHHHHHHHHHTTT---------CCEEEEEECH
T ss_pred hcCCc----ccHHHHHHHHHHHHHHHHhcccc---------chheeeecCC
Confidence 76553 34566666677777777777632 4455556664
|
| >d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: Creeping white clover (Trifolium repens) [TaxId: 3899]
Probab=97.32 E-value=6.1e-05 Score=78.41 Aligned_cols=108 Identities=16% Similarity=0.112 Sum_probs=87.1
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC---CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV---RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWL 132 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~---~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL 132 (523)
..|+++|+.||++|+|+.|+-|-|.-.+|. +|++|=.|-.--+++|+.|.++||..++-. -.-.+|.||
T Consensus 73 ~~y~eDi~l~~~lG~~~yRfSi~WsRI~P~g~~~g~~n~~gl~~Y~~~i~~l~~~GIeP~vTL--------~HfdlP~~l 144 (490)
T d1cbga_ 73 HRYKEDIGIMKDMNLDAYRFSISWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTL--------FHWDVPQAL 144 (490)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCHHHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHH
T ss_pred hhhHHHHHHHHHcCCCEEEccCCHHHcCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEEe--------ecCCChHHH
Confidence 458999999999999999999999999998 899999998899999999999999988776 355799999
Q ss_pred cCC-CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccc
Q 009890 133 HFI-PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEY 184 (523)
Q Consensus 133 ~~~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEy 184 (523)
... .+- .|+...++..+|.+.+++.+.+. |-.|--=||.
T Consensus 145 ~~~~Ggw----~n~~~~~~F~~Ya~~v~~~fgd~---------V~~W~T~NEP 184 (490)
T d1cbga_ 145 EDEYRGF----LGRNIVDDFRDYAELCFKEFGDR---------VKHWITLNEP 184 (490)
T ss_dssp HHHHCGG----GSTTHHHHHHHHHHHHHHHHTTT---------CCEEEEEECH
T ss_pred hhccccc----CCHHHHHHHHHHHHHHHHHhcCc---------cceEEEccCC
Confidence 742 332 34566677777777777777732 4456666774
|
| >d1nofa2 c.1.8.3 (A:44-320) Glycosyl hydrolase family 5 xylanase, catalytic domain {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Glycosyl hydrolase family 5 xylanase, catalytic domain species: Erwinia chrysanthemi [TaxId: 556]
Probab=97.24 E-value=0.00094 Score=64.29 Aligned_cols=224 Identities=10% Similarity=0.103 Sum_probs=128.7
Q ss_pred hCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCCCCee-eecCCh
Q 009890 67 DGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFIPGIQ-FRTDNE 145 (523)
Q Consensus 67 a~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~p~i~-~Rt~d~ 145 (523)
.+|++.+|+.| .++.-||+ ....+++.|++.|++++.-| | -.|.|+....... --+-.+
T Consensus 31 g~g~s~~R~~i-------d~~~~~~~---~~i~~~k~A~~~~~ki~~sp-------W---SpP~wMK~n~~~~~gg~L~~ 90 (277)
T d1nofa2 31 QIGLSIMRVRI-------DPDSSKWN---IQLPSARQAVSLGAKIMATP-------W---SPPAYMKSNNSLINGGRLLP 90 (277)
T ss_dssp CCCCCEEEEEC-------CSSGGGGG---GGHHHHHHHHHTTCEEEEEC-------S---CCCGGGBTTSSSBSCCBBCG
T ss_pred CCcceEEEeee-------CCCcchhh---HhhHHHHHHHHcCCcEEEcC-------C---CCcHHHcCCCCcccCCccCH
Confidence 47999999988 35566776 45889999999999987765 3 4899997632210 011246
Q ss_pred hHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCc---ccHHHHHHHHHHHHhcCCCcceEEccCC-
Q 009890 146 PFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGA---AGKSYIKWAAGMALSLDTGVPWVMCQQS- 221 (523)
Q Consensus 146 ~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~---~~~~y~~~l~~~~~~~g~~vP~~~~~~~- 221 (523)
.+.+....|+.+.++.++++++ +|=++-+-||..... .|.. ...+-.+.+++...+++ .+-++.++..
T Consensus 91 ~~~~~~A~Yl~~~i~~y~~~Gi------~i~~is~qNEP~~~~-~~~s~~~~~~~~~~~i~~~~~~~~-~~ki~~~d~~~ 162 (277)
T d1nofa2 91 ANYSAYTSHLLDFSKYMQTNGA------PLYAISIQNEPDWKP-DYESCEWSGDEFKSYLKSQGSKFG-SLKVIVAESLG 162 (277)
T ss_dssp GGHHHHHHHHHHHHHHHHHTTC------CCSEEESCSCTTCCC-SSBCCBCCHHHHHHHHHHHGGGGT-TSEEEEEEETT
T ss_pred HHHHHHHHHHHHHHHHHHHcCC------CeeEEeecCCCCCCC-CCCCcccCHHHHHHHHHHhhhccc-ccceEeehhcC
Confidence 7777778888888888887655 787888889997532 1221 12334444444433332 2334444432
Q ss_pred C---CCCcccc------CCC--Cccc--CCCC----CCCCCCCceEeeeccccccccCCCCCCCCHHHHHHHHHHHHhcC
Q 009890 222 D---APDPIIN------TCN--GFYC--DQFT----PNSNNKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRG 284 (523)
Q Consensus 222 ~---~p~~vi~------~~n--g~~~--~~~~----~~~~~~P~~~tE~~~Gwf~~wG~~~~~r~~~d~~~~~~~~~~~g 284 (523)
+ .+.+++. ... +++| .... ...|+||...||...+-.+ ....-..+...+..+...+..+
T Consensus 163 ~~~~~~~~~l~d~~a~~~v~~ia~H~Y~~~~~~~~~~~~~~K~lw~TE~~~~~~~---~~~~w~~a~~~a~~i~~~l~~~ 239 (277)
T d1nofa2 163 FNPALTDPVLKDSDASKYVSIIGGHLYGTTPKPYPLAQNAGKQLWMTEHYVDSKQ---SANNWTSAIEVGTELNASMVSN 239 (277)
T ss_dssp CCGGGTHHHHTCHHHHTTCCEEEEECTTSCCCCCHHHHHTTCEEEEEEECSCTTS---CTTCHHHHHHHHHHHHHHHHTT
T ss_pred CcHHHhHHHhhChHHHHHHHHhhccCCCCCcccchhhhCCCccceeEEeeccCCC---CcccHHHHHHHHHHHHHHHHcC
Confidence 1 1122221 111 1222 1111 2247899999998542111 1111112344444444455444
Q ss_pred CeeeeeeeeccCCCCCCCCCCCcccccccCCCCCCcCCCCCChhHHHHHHHHHHHH
Q 009890 285 GTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIK 340 (523)
Q Consensus 285 ~s~~nyYM~hGGTNfG~~~G~~~~~TSYDy~Api~E~G~~~~pKy~~lk~lh~~i~ 340 (523)
.+-|++.++.+- .++|..+|.+ ++.|..|+...+|||
T Consensus 240 ---~~a~~~W~~~~~---------------~gli~~d~~~-t~~yy~~~hfSrFIr 276 (277)
T d1nofa2 240 ---YSAYVWWYIRRS---------------YGLLTEDGKV-SKRGYVMSQYARFVR 276 (277)
T ss_dssp ---EEEEEEEESBST---------------TSSBCTTSCB-CHHHHHHHHHHTTSC
T ss_pred ---CeeEEEcCCcCC---------------CceEeeCCcC-chHhHHHhhhccccC
Confidence 355777654311 2466677777 688988888887765
|
| >d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: Sorghum bicolor [TaxId: 4558]
Probab=97.15 E-value=0.00015 Score=75.33 Aligned_cols=108 Identities=18% Similarity=0.149 Sum_probs=86.7
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC---CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV---RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWL 132 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~---~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL 132 (523)
..|+++|+.||++|+|+-|+-+-|.-.+|. +|.+|=+|-.--+++|+.+.++||..++-. -.-.+|.||
T Consensus 67 ~ry~eDi~l~~~lG~~~yRfSisWsRI~P~g~~~g~~n~~gl~~Y~~~id~l~~~GI~P~vTL--------~Hfd~P~~l 138 (484)
T d1v02a_ 67 HMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITI--------FHWDTPQAL 138 (484)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCHHHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHH
T ss_pred hhhHHHHHHHHHhCCCEEEccCCHHHcCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEe--------cCCccccee
Confidence 458999999999999999999999999997 799999998899999999999999988766 345689999
Q ss_pred cCC-CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccc
Q 009890 133 HFI-PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEY 184 (523)
Q Consensus 133 ~~~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEy 184 (523)
.+. .+- .|+...++..+|.+.+++.+++ -|=.|--=||.
T Consensus 139 ~~~~Ggw----~n~~~~~~F~~Ya~~v~~~fgd---------~V~~W~T~NEP 178 (484)
T d1v02a_ 139 VDAYGGF----LDERIIKDYTDFAKVCFEKFGK---------TVKNWLTFNEP 178 (484)
T ss_dssp HHHHCGG----GSTHHHHHHHHHHHHHHHHHTT---------TCCEEEEEECH
T ss_pred eeecCcc----cCHHHHHHHHHhhHHHHHHhcc---------hhhceEEecCc
Confidence 753 332 3566667777777777777763 24455666774
|
| >d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: 6-phospho-beta-D-galactosidase, PGAL species: Lactococcus lactis [TaxId: 1358]
Probab=97.04 E-value=0.00023 Score=73.50 Aligned_cols=108 Identities=15% Similarity=0.118 Sum_probs=84.8
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC-CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV-RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~-~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~ 134 (523)
..|+++|+.||++|+|+-|.-+-|.-.+|. +|++|=+|-.--+++|+.|.++||..++-. -.-.+|.||.+
T Consensus 54 ~~y~eDi~l~~~lG~~~yRfSisWsRI~P~g~g~~n~~gl~~Y~~~id~l~~~GI~P~VTL--------~H~dlP~~l~~ 125 (468)
T d1pbga_ 54 HKYPVDLELAEEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTL--------HHFDTPEALHS 125 (468)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCHHHHSTTSSSSCCHHHHHHHHHHHHHHHHHTCEEEEEE--------ESSCCBHHHHH
T ss_pred hhhHHHHHHHHHhCCCEEEccCCHHHcCcCCCCCcCHHHHHHHHHHHHHHHHhCCeeEEEE--------ecccchhhHhh
Confidence 568999999999999999999999999998 799999999999999999999999977655 34578999987
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccc
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg 185 (523)
.-|- .|+...++..+|.+.+++.+.+ |-.|--=||..
T Consensus 126 ~GGw----~~~~~v~~F~~Ya~~~~~~fgd----------vk~W~T~NEP~ 162 (468)
T d1pbga_ 126 NGDF----LNRENIEHFIDYAAFCFEEFPE----------VNYWTTFNEIG 162 (468)
T ss_dssp TTGG----GSTHHHHHHHHHHHHHHHHCTT----------CCEEEEESCHH
T ss_pred cCcc----CCHHHHHHHHHHHHHHHHhcCC----------ceEEEEecCcc
Confidence 5443 3455556666666666665542 33556667754
|
| >d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Pseudomonas fluorescens [TaxId: 294]
Probab=96.97 E-value=0.0004 Score=69.12 Aligned_cols=128 Identities=16% Similarity=0.188 Sum_probs=93.9
Q ss_pred CCCCEEEEc--cccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCC-CCCCccccCCCCeeeecCC
Q 009890 68 GGLDVIETY--VFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNF-GGFPLWLHFIPGIQFRTDN 144 (523)
Q Consensus 68 ~GlN~V~tY--vfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~-GG~P~WL~~~p~i~~Rt~d 144 (523)
.-||.|..- .=|...|| +|+|||+ ..+++++.|+++||.|.-. +.| |.. ...|.|+...+
T Consensus 35 ~~Fn~~t~eN~~Kw~~~~~-~g~~n~~---~~D~~v~~a~~ng~~vrGH--~Lv---W~~~~~~P~w~~~~~-------- 97 (346)
T d1w32a_ 35 AEFNQITAENIMKMSYMYS-GSNFSFT---NSDRLVSWAAQNGQTVHGH--ALV---WHPSYQLPNWASDSN-------- 97 (346)
T ss_dssp HHCSEEEESSTTSGGGGEE-TTEECCH---HHHHHHHHHHHTTCEEEEE--EEE---CCCGGGCCTTCSTTC--------
T ss_pred HhCCeecccccCCceeecC-CCCCCch---HHHHHHHHHHHCCCEEEEE--eee---cCCcccCcccccCCc--------
Confidence 347888764 55999998 5999999 8999999999999987422 222 222 25799987533
Q ss_pred hhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccccccc-----------------ccCcccHHHHHHHHHHHH
Q 009890 145 EPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDS-----------------AYGAAGKSYIKWAAGMAL 207 (523)
Q Consensus 145 ~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~-----------------~~g~~~~~y~~~l~~~~~ 207 (523)
+..++.++++++.++.+.+ |.|-.|.|=||--.... .....+..|++.+-+.|+
T Consensus 98 ~~~~~~~~~~I~~v~~ry~---------g~i~~WDVvNE~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~yi~~aF~~Ar 168 (346)
T d1w32a_ 98 ANFRQDFARHIDTVAAHFA---------GQVKSWDVVNEALFDSADDPDGRGSANGYRQSVFYRQFGGPEYIDEAFRRAR 168 (346)
T ss_dssp TTHHHHHHHHHHHHHHHTT---------TTCSEEEEEECCBCCGGGCTTCCCEETTEECCHHHHHHTSTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhC---------CcceEEEEEeeeccccccCccccccccccccchhhhhccChHHHHHHHHHHH
Confidence 3467888888888887776 46889999999632110 001136789999999999
Q ss_pred hcCCCcceEEccCC
Q 009890 208 SLDTGVPWVMCQQS 221 (523)
Q Consensus 208 ~~g~~vP~~~~~~~ 221 (523)
+...++-++.++-.
T Consensus 169 ~~dP~a~L~~Ndyn 182 (346)
T d1w32a_ 169 AADPTAELYYNDFN 182 (346)
T ss_dssp HHCTTSEEEEEESS
T ss_pred HhCCCCEEEeccCC
Confidence 99999999988753
|
| >d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: White mustard (Sinapis alba) [TaxId: 3728]
Probab=96.90 E-value=0.00026 Score=73.75 Aligned_cols=109 Identities=10% Similarity=0.090 Sum_probs=86.1
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCC---CceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccc
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPV---RNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWL 132 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~---~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL 132 (523)
..|+++|+.||++|+|+-|.-+-|.-.+|. +|.+|=.|-.--+++|+.|.++||..++-. -.-.+|.||
T Consensus 75 ~~y~eDi~l~~~lG~~~yRfSI~WsRI~P~g~~~~~~n~~gl~~Y~~~i~~l~~~GI~P~vTL--------~HfdlP~~l 146 (499)
T d1e4mm_ 75 SYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTL--------FHWDLPQTL 146 (499)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCHHHHCTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEE--------ESSCCBHHH
T ss_pred HHHHHHHHHHHHhCCCEEEccCCHHHcCcCCCCCCCCCHHHHHHHHHHHHHHHHcCCcceEEE--------ecCchHHHH
Confidence 458999999999999999999999999995 577898898899999999999999988765 466799999
Q ss_pred cCC-CCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEecccccccc
Q 009890 133 HFI-PGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYG 185 (523)
Q Consensus 133 ~~~-p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg 185 (523)
.+. .|- .|+...++-.+|.+.+++.+++. |-.|--=||..
T Consensus 147 ~~~~GGW----~~~~~~~~F~~YA~~v~~~fgd~---------Vk~W~T~NEP~ 187 (499)
T d1e4mm_ 147 QDEYEGF----LDPQIIDDFKDYADLCFEEFGDS---------VKYWLTINQLY 187 (499)
T ss_dssp HHHHCGG----GSTHHHHHHHHHHHHHHHHHTTT---------CCEEEEESCTT
T ss_pred HHhcccc----cCHHHHHHHHHHHHHHHHhhccc---------cceeEEccCce
Confidence 753 442 34566666677777777777632 44566667754
|
| >d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Putative alpha-L-fucosidase, catalytic domain domain: Putative alpha-L-fucosidase, catalytic domain species: Thermotoga maritima [TaxId: 2336]
Probab=96.62 E-value=0.12 Score=50.65 Aligned_cols=240 Identities=17% Similarity=0.196 Sum_probs=121.2
Q ss_pred eeCCCCCccchHHHHHHHHhCCCCEEEEc-------cccCcCCCCCceeeccCcch-HHHHHHHHHHcCCEEEEecCcee
Q 009890 48 IHYPRSTPEMWPDLIQKSKDGGLDVIETY-------VFWNLHEPVRNQYNFEGRYD-LVKFVKLVAEAGLYAHLRIGPYV 119 (523)
Q Consensus 48 iHy~R~~~~~W~d~l~k~Ka~GlN~V~tY-------vfWn~HEp~~G~ydF~G~~d-L~~fl~la~~~GL~Vilr~GPyi 119 (523)
+.+.+..++.| .+.+|++|+.-|=.- -.|+.....-..-+-...+| +..+.+.|+++||.+ |-|.
T Consensus 94 Fnp~~fDa~~W---v~~ak~aGaky~vlTaKHHDGF~Lw~S~~t~~n~~~~~~~rDiv~el~~A~rk~Glk~----G~Yy 166 (350)
T d1hl9a2 94 FTAEKWDPQEW---ADLFKKAGAKYVIPTTKHHDGFCLWGTKYTDFNSVKRGPKRDLVGDLAKAVREAGLRF----GVYY 166 (350)
T ss_dssp CCCTTCCHHHH---HHHHHHTTCSEEEEEEECTTCCBSSCCSSCSCBTTTSTTCSCHHHHHHHHHHHTTCEE----CEEE
T ss_pred hhcccCCHHHH---HHHHHHcCCCEEEEEEEecCCcccCCCCCCCCCCcCCCCCCchHHHHHHHHHhcCCce----eEEe
Confidence 34455567777 567889999865432 22554322111112223456 667889999999855 5576
Q ss_pred c-c-ccCCCCCCccccCCCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccccCcccHH
Q 009890 120 C-A-EWNFGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKS 197 (523)
Q Consensus 120 ~-a-Ew~~GG~P~WL~~~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~~g~~~~~ 197 (523)
+ + .|.....|........ ..+.+.+.|.+.+..=+++|+.... |+++|= .-+. ......
T Consensus 167 S~~~dw~~~~~~~~~~~~~~-~~~~~~~~y~~~~~~Ql~EL~~~Y~----------p~~~w~---D~~~-----~~~~~~ 227 (350)
T d1hl9a2 167 SGGLDWRFTTEPIRYPEDLS-YIRPNTYEYADYAYKQVMELVDLYL----------PDVLWN---DMGW-----PEKGKE 227 (350)
T ss_dssp CCSCCTTSCCSCCCSGGGGG-TCSCCSHHHHHHHHHHHHHHHHHHC----------CSCEEE---CSCC-----CGGGTT
T ss_pred ccccccccccCCCCCcchhc-ccCccchHHHHHHHHHHHHHHhccC----------CceEEe---cccc-----cccchh
Confidence 6 2 5666555533222111 2344556666665544444444333 444431 1111 011122
Q ss_pred HHHHHHHHHHhcCCCcceEEccCCCCCCccccCCCCcccCCC---CCCCCCCCceEeeec-cccccccCCC-CCCCCHHH
Q 009890 198 YIKWAAGMALSLDTGVPWVMCQQSDAPDPIINTCNGFYCDQF---TPNSNNKPKMWTENW-SGWFLSFGGA-VPYRPVED 272 (523)
Q Consensus 198 y~~~l~~~~~~~g~~vP~~~~~~~~~p~~vi~~~ng~~~~~~---~~~~~~~P~~~tE~~-~Gwf~~wG~~-~~~r~~~d 272 (523)
-++.+.++++++..++ +.+.....+.. .+..++.- ....+..|.-.+.-. .+|+-..... ...+++++
T Consensus 228 ~~~~~~~~i~~~qp~~--~i~~r~~~~~~-----~~~~~~~~~~~p~~~~~~~WE~~~ti~~~Wgy~~~d~~~~~ks~~~ 300 (350)
T d1hl9a2 228 DLKYLFAYYYNKHPEG--SVNDRWGVPHW-----DFKTAEYHVNYPGDLPGYKWEFTRGIGLSFGYNRNEGPEHMLSVEQ 300 (350)
T ss_dssp HHHHHHHHHHHHCTTC--CBCSCSSSSCC-----SSEEEC--------CCSSCEEEEEESSSCSSCCSCC----CCCHHH
T ss_pred hHHHHHHHHHHhCCCC--cccceeccCCC-----CCcccccccCCCCCcccccceeeeeccCCCCCCCCCCccccCCHHH
Confidence 3445666666655443 11111111111 01111110 011223343222222 2343322222 34578999
Q ss_pred HHHHHHHHHhcCCee-eeeeeeccCCCCCCCCCCCcccccccCCCCCCcCCCCCChhHHHHHHHHHHHHHhhhcc
Q 009890 273 LAFAVARFFQRGGTF-QNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAAL 346 (523)
Q Consensus 273 ~~~~~~~~~~~g~s~-~nyYM~hGGTNfG~~~G~~~~~TSYDy~Api~E~G~~~~pKy~~lk~lh~~i~~~~~~L 346 (523)
+...+....++||++ +|. | -+.+|.+.++.-..|++++.-|+..+.++
T Consensus 301 li~~l~~~VskggnlLLNV---------g-----------------P~~dG~Ip~~~~~~L~~iG~Wl~~nGEaI 349 (350)
T d1hl9a2 301 LVYTLVDVVSKGGNLLLNV---------G-----------------PKGDGTIPDLQKERLLGLGEWLRKYGDAI 349 (350)
T ss_dssp HHHHHHHHHHTTEEEEEEE---------C-----------------CCTTSCCCHHHHHHHHHHHHHHHHHGGGT
T ss_pred HHHHHHHHhcCCceEEEee---------C-----------------CCCCCCcCHHHHHHHHHHHHHHHHhcCcc
Confidence 999999999999884 444 1 23568887778889999999999776654
|
| >d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: beta-Glycosidase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.36 E-value=0.0031 Score=65.37 Aligned_cols=107 Identities=22% Similarity=0.233 Sum_probs=82.0
Q ss_pred chHHHHHHHHhCCCCEEEEccccCcCCCCC----------------------------ceeeccCcchHHHHHHHHHHcC
Q 009890 57 MWPDLIQKSKDGGLDVIETYVFWNLHEPVR----------------------------NQYNFEGRYDLVKFVKLVAEAG 108 (523)
Q Consensus 57 ~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~----------------------------G~ydF~G~~dL~~fl~la~~~G 108 (523)
.++++++.||++|+|+-|.-|-|.-.+|.. |++|=+|-.--+++|+.|.++|
T Consensus 62 ~y~eDi~l~~~lG~~~yRfSI~WsRI~P~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~~gl~~Y~~~id~l~~~G 141 (489)
T d1uwsa_ 62 NYKTFHDNAQKMGLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIFKDLKSRG 141 (489)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCHHHHCCSCCCCC--CCTTCSCCCCCCCCHHHHHHHHTTSCHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHcCCCEEEecccHHhcCcCCCccccccccccccccccccccccccccccCCCHHHHHHHHHHHHHHHHcC
Confidence 579999999999999999999999999973 6677777778899999999999
Q ss_pred CEEEEecCceeccccCCCCCCccccC-----------CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEe
Q 009890 109 LYAHLRIGPYVCAEWNFGGFPLWLHF-----------IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIIL 177 (523)
Q Consensus 109 L~Vilr~GPyi~aEw~~GG~P~WL~~-----------~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~ 177 (523)
|..++-. -.-.+|.||.+ .-|- .++...++-.+|.+.+++.+++. |-.
T Consensus 142 IeP~VTL--------~H~dlP~~L~d~~~~~~~~f~~~GGW----~n~~~v~~F~~YA~~v~~~fgdr---------Vk~ 200 (489)
T d1uwsa_ 142 LYFILNM--------YHWPLPLWLHDPIRVRRGDFTGPSGW----LSTRTVYEFARFSAYIAWKFDDL---------VDE 200 (489)
T ss_dssp CEEEEES--------CSSCCBTTTBCHHHHHTTCCSSCBGG----GSHHHHHHHHHHHHHHHHHHTTT---------CSE
T ss_pred CccEEEE--------cCCCCcHHHHhhhhccccccccCCCc----CCHHHHHHHHHHHHHHHHHhcCc---------ceE
Confidence 9988876 46679999975 1111 24556666667777777776632 344
Q ss_pred ccccccc
Q 009890 178 SQIENEY 184 (523)
Q Consensus 178 ~QIENEy 184 (523)
|--=||.
T Consensus 201 WiTiNEP 207 (489)
T d1uwsa_ 201 YSTMNEP 207 (489)
T ss_dssp EEEEECH
T ss_pred EEeeCCC
Confidence 5555664
|
| >d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: beta-Glycosidase species: Archaeon Thermosphaera aggregans [TaxId: 54254]
Probab=96.09 E-value=0.0032 Score=65.08 Aligned_cols=96 Identities=25% Similarity=0.239 Sum_probs=73.6
Q ss_pred chHHHHHHHHhCCCCEEEEccccCcCCCCCc------------------------------eeeccCcchHHHHHHHHHH
Q 009890 57 MWPDLIQKSKDGGLDVIETYVFWNLHEPVRN------------------------------QYNFEGRYDLVKFVKLVAE 106 (523)
Q Consensus 57 ~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G------------------------------~ydF~G~~dL~~fl~la~~ 106 (523)
.|+++|+.||++|+|+-|.-+-|.-.+|.++ .+|=+|-...+++|+.+.+
T Consensus 61 ~y~eDi~l~~~lG~~~yRfSi~WsRi~P~g~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~gv~~Y~~~i~~l~~ 140 (481)
T d1qvba_ 61 LNQNDHDLAEKLGVNTIRVGVEWSRIFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVNHYVEMYKDWVE 140 (481)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCHHHHCSSCCTTSCCCEEECTTSCEEEECCCHHHHHHHHHHSCHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHcCCCEEEccCcHHhcCcCCCCcccccccccccccccccccccchhhhccccCCHHHHHHHHHHHHHHHH
Confidence 4599999999999999999999999999742 2344555667899999999
Q ss_pred cCCEEEEecCceeccccCCCCCCccccCC------------CCeeeecCChhHHHHHHHHHHHHHHHHHh
Q 009890 107 AGLYAHLRIGPYVCAEWNFGGFPLWLHFI------------PGIQFRTDNEPFKAEMQRFTAKIVDMMKQ 164 (523)
Q Consensus 107 ~GL~Vilr~GPyi~aEw~~GG~P~WL~~~------------p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~ 164 (523)
+||..++-. -.-.+|.||.+. -|- .|+...++-.+|.+.+++.+.+
T Consensus 141 ~GI~P~VTL--------~H~dlP~~L~d~~~~~~~g~~~~~GGW----~n~~~v~~F~~YA~~v~~~fgd 198 (481)
T d1qvba_ 141 RGRKLILNL--------YHWPLPLWLHNPIMVRRMGPDRAPSGW----LNEESVVEFAKYAAYIAWKMGE 198 (481)
T ss_dssp TTCEEEEES--------CCSCCBTTTBCHHHHHHHCGGGSCBGG----GSTHHHHHHHHHHHHHHHHHTT
T ss_pred hCCeeEEEE--------ecCCCcHHHhhhhhcccccccccCCCc----cCHHHHHHHHHHHHHHHHHhcc
Confidence 999987765 466799999741 222 2566666677777777777764
|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp., ksm-k38 [TaxId: 1409]
Probab=95.08 E-value=0.014 Score=55.27 Aligned_cols=68 Identities=10% Similarity=0.083 Sum_probs=46.4
Q ss_pred eeCCCCC-------ccchHHHHHHHHhCCCCEEEE-ccccCcCCCCCc--ee----------------eccCcchHHHHH
Q 009890 48 IHYPRST-------PEMWPDLIQKSKDGGLDVIET-YVFWNLHEPVRN--QY----------------NFEGRYDLVKFV 101 (523)
Q Consensus 48 iHy~R~~-------~~~W~d~l~k~Ka~GlN~V~t-YvfWn~HEp~~G--~y----------------dF~G~~dL~~fl 101 (523)
+|++-+. -....+.|.-+|++|+++|++ .++=+-....-| .+ .|.+..++.+|+
T Consensus 8 ~~~~~~~~~~~~~~~~~i~~kLdyLk~LGvt~I~l~Pi~~~~~~~~~gY~~~d~~~~~~~~~~~~vd~~~Gt~~efk~lV 87 (390)
T d1ud2a2 8 MQYYEWHLENDGQHWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAI 87 (390)
T ss_dssp EECCCTTCCCSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHH
T ss_pred EEeeccCCCCCCCCHHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCccCCcccccccccCCcCCCCCCHHHHHHHH
Confidence 5777763 444567788889999999997 343000000000 11 255667999999
Q ss_pred HHHHHcCCEEEEec
Q 009890 102 KLVAEAGLYAHLRI 115 (523)
Q Consensus 102 ~la~~~GL~Vilr~ 115 (523)
+.|++.||.|||-.
T Consensus 88 ~~~H~~GI~VilDv 101 (390)
T d1ud2a2 88 GSLKSNDINVYGDV 101 (390)
T ss_dssp HHHHHTTCEEEEEE
T ss_pred HHHHhcCCceEEEE
Confidence 99999999999886
|
| >d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: YicI catalytic domain-like domain: Alpha-galactosidase GalA catalytic domain species: Thermotoga maritima [TaxId: 2336]
Probab=94.38 E-value=0.044 Score=53.35 Aligned_cols=160 Identities=14% Similarity=0.156 Sum_probs=98.1
Q ss_pred CCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCc--chHHHHHHHHHHcCCEEEEecCceeccccC--C
Q 009890 50 YPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGR--YDLVKFVKLVAEAGLYAHLRIGPYVCAEWN--F 125 (523)
Q Consensus 50 y~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~--~dL~~fl~la~~~GL~Vilr~GPyi~aEw~--~ 125 (523)
|..++.+...+.+++||+.|++.|-+--.|.- .-|.|.+.-. -++..+++.+++.||++.+...|++..... +
T Consensus 17 ~~~i~e~~i~~~a~~~~~~g~~~i~iDdgW~~---~~gd~~~d~~~FPglk~l~~~~h~~G~k~gl~~~p~~~~~~s~~~ 93 (348)
T d1zy9a2 17 FLDLTWEETLKNLKLAKNFPFEVFQIDDAYEK---DIGDWLVTRGDFPSVEEMAKVIAENGFIPGIWTAPFSVSETSDVF 93 (348)
T ss_dssp GGGCCHHHHHHHHHHGGGTTCSEEEECTTSEE---ETTEEEEECTTCCCHHHHHHHHHHTTCEEEEEECTTEEETTCHHH
T ss_pred CCCCCHHHHHHHHHHHHcCCCcEEEECccccc---CCCCceECcccCcCHHHHHHHHHhcCCEEEEEeeeccccCCcHHH
Confidence 44567778888999999999999999888852 3455554321 169999999999999999999998764322 2
Q ss_pred CCCCccccCCCCe---eeecCC------hhHHHHHHHHHHHHHHHHHhcccccccCCceEecccc-ccccccccccC---
Q 009890 126 GGFPLWLHFIPGI---QFRTDN------EPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIE-NEYGNIDSAYG--- 192 (523)
Q Consensus 126 GG~P~WL~~~p~i---~~Rt~d------~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIE-NEyg~~~~~~g--- 192 (523)
...|.|+...+.. ..|... ......+++|+..+++.+++.++ =.+-++ |+.+.......
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~p~~~~~~~~~~~~~~~~Gv--------d~~K~D~~~~~~~~~~~~~~~ 165 (348)
T d1zy9a2 94 NEHPDWVVKENGEPKMAYRNWNKKIYALDLSKDEVLNWLFDLFSSLRKMGY--------RYFKIDFLFAGAVPGERKKNI 165 (348)
T ss_dssp HHCGGGBCEETTEECEEEEETTEEEEEBCTTCHHHHHHHHHHHHHHHHTTC--------CEEEECCGGGGGCSSBCSSSC
T ss_pred HhCccceeccCCCCccccccCCCCeeccCCCcHHHHHHHHHHHHHHHhcCC--------CEEEeCCCCCccCCcccCccc
Confidence 2357788654322 122110 01234577777777788886543 223333 12111110000
Q ss_pred cccHHHHHHHHHHHHhcCCCcceEEccC
Q 009890 193 AAGKSYIKWAAGMALSLDTGVPWVMCQQ 220 (523)
Q Consensus 193 ~~~~~y~~~l~~~~~~~g~~vP~~~~~~ 220 (523)
..-+.|.+.++.+.+..+-++.+..|..
T Consensus 166 ~~~~~~~~~l~~~~~~~~~~~~~~~c~~ 193 (348)
T d1zy9a2 166 TPIQAFRKGIETIRKAVGEDSFILGCGS 193 (348)
T ss_dssp CHHHHHHHHHHHHHHHHCTTSEEEECSC
T ss_pred HHHHHHHHHHHHHHhhhcCCeEEecCCC
Confidence 1124555566665556677887888864
|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp. 707 [TaxId: 1416]
Probab=92.56 E-value=0.3 Score=46.99 Aligned_cols=57 Identities=12% Similarity=0.121 Sum_probs=39.2
Q ss_pred HHHHHHHHhCCCCEEEE-ccccCcCCCCCc--eee----------------ccCcchHHHHHHHHHHcCCEEEEec
Q 009890 59 PDLIQKSKDGGLDVIET-YVFWNLHEPVRN--QYN----------------FEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~t-YvfWn~HEp~~G--~yd----------------F~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
.+.|.-+|++|+|+|.+ .|+-+......| .|| |.+..||.++++.|++.||+|||-.
T Consensus 24 ~~kLdyL~~LGv~aIwL~Pi~~~~~~~~~gY~~~~~yd~~~~~~~~~vd~~~Gt~~df~~Lv~~aH~~GIkVilDv 99 (394)
T d2d3na2 24 NSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGDV 99 (394)
T ss_dssp HHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECcCccCCCCCCCCCCcccCcccccccccCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 34566689999999996 455332211111 111 3456799999999999999999864
|
| >d1bhga2 b.18.1.5 (A:22-225) beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Galactose-binding domain-like superfamily: Galactose-binding domain-like family: beta-Galactosidase/glucuronidase, N-terminal domain domain: beta-Glucuronidase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.48 E-value=0.073 Score=48.01 Aligned_cols=47 Identities=17% Similarity=0.232 Sum_probs=37.6
Q ss_pred CceeeEEEeEEEecCCCccccCCCeeEEEEeecCcEEEEEEcCeeeec
Q 009890 475 QSDYLWYSLSTNIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVGE 522 (523)
Q Consensus 475 ~sDYLWY~T~v~i~~~~~~~~~~~~~~L~v~s~gh~lh~FVNg~~~G~ 522 (523)
-+.+.||.++|++..+-. ...+++..|+++.......|||||+++|+
T Consensus 74 ~~g~~wYrr~f~vp~~~~-~~~~~rv~L~f~gv~~~a~V~lNG~~vG~ 120 (204)
T d1bhga2 74 FVGWVWYEREVILPERWT-QDLRTRVVLRIGSAHSYAIVWVNGVDTLE 120 (204)
T ss_dssp CCSEEEEEEEEECCTTTT-SCSSEEEEEEESCCCSEEEEECSSSEEEE
T ss_pred ccceEEEEEEEEEccccc-ccCCCEEEEEECCccEeeEEEECCEEeee
Confidence 457889999999975421 12246789999999999999999999995
|
| >d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus subtilis [TaxId: 1423]
Probab=91.72 E-value=0.049 Score=52.76 Aligned_cols=67 Identities=12% Similarity=0.087 Sum_probs=44.5
Q ss_pred eCCCCCccchHHHHHHHHhCCCCEEEE-ccccCcCCC-------------CCcee-----eccCcchHHHHHHHHHHcCC
Q 009890 49 HYPRSTPEMWPDLIQKSKDGGLDVIET-YVFWNLHEP-------------VRNQY-----NFEGRYDLVKFVKLVAEAGL 109 (523)
Q Consensus 49 Hy~R~~~~~W~d~l~k~Ka~GlN~V~t-YvfWn~HEp-------------~~G~y-----dF~G~~dL~~fl~la~~~GL 109 (523)
|.+-++-+-..+.|..+|++|+|+|.+ .++-+.... .+.-| .|.+..||.+|++.|++.||
T Consensus 10 ~~f~~~f~~i~~~ldyl~~lGv~aIwl~Pi~~~~~~~~~~~~~~~~y~gY~~~dy~~vd~~~Gt~~df~~LV~~aH~~Gi 89 (344)
T d1ua7a2 10 HAWNWSFNTLKHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGI 89 (344)
T ss_dssp ECTTBCHHHHHHTHHHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHHHHHHHHHHHTTTC
T ss_pred EecCCcHHHHHHhHHHHHHcCCCEEEeCCCeeCCCcCCCCCCCCCCccccccccCCCCCCCCCCHHHHHHHHHHhcccce
Confidence 666665333344556669999999995 554332111 11111 25566799999999999999
Q ss_pred EEEEec
Q 009890 110 YAHLRI 115 (523)
Q Consensus 110 ~Vilr~ 115 (523)
+||+-.
T Consensus 90 ~VilD~ 95 (344)
T d1ua7a2 90 KVIVDA 95 (344)
T ss_dssp EEEEEE
T ss_pred eEeecc
Confidence 999875
|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=90.67 E-value=0.16 Score=49.10 Aligned_cols=57 Identities=7% Similarity=0.120 Sum_probs=38.6
Q ss_pred HHHHHHHHhCCCCEEEE-ccccCcCCCC--Ccee----------------eccCcchHHHHHHHHHHcCCEEEEec
Q 009890 59 PDLIQKSKDGGLDVIET-YVFWNLHEPV--RNQY----------------NFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~t-YvfWn~HEp~--~G~y----------------dF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
.+.|.-+|++|+|+|.+ .|+=+..... =+.+ .|.+..||.++++.|++.||+|||-.
T Consensus 27 ~~kLdyLk~LGv~aI~L~Pi~~~~~~~~~GY~~~d~y~~~~~~~~~~vd~~~Gt~~df~~LV~~aH~~GIkVIlDv 102 (393)
T d1hvxa2 27 ANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADV 102 (393)
T ss_dssp HHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECCCCcCCCCCCCCCCccCccccccccccCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 35566779999999997 3431100000 0112 24556799999999999999999885
|
| >d1tg7a2 b.18.1.27 (A:667-848) Beta-galactosidase LacA, domains 4 and 5 {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Galactose-binding domain-like superfamily: Galactose-binding domain-like family: Beta-galactosidase LacA, domains 4 and 5 domain: Beta-galactosidase LacA, domains 4 and 5 species: Penicillium sp. [TaxId: 5081]
Probab=90.50 E-value=0.14 Score=45.69 Aligned_cols=42 Identities=17% Similarity=0.125 Sum_probs=32.4
Q ss_pred ceeeEEEeEEEecCCCccccCCCeeEEEEeecCcEEEEEEcCeeeec
Q 009890 476 SDYLWYSLSTNIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVGE 522 (523)
Q Consensus 476 sDYLWY~T~v~i~~~~~~~~~~~~~~L~v~s~gh~lh~FVNg~~~G~ 522 (523)
....||.++|.++... +..-+|......++..|||||+++|+
T Consensus 62 ~g~~wYRr~F~~~~~~-----~~~~ll~f~gv~~~~~VwlNG~~vG~ 103 (182)
T d1tg7a2 62 TGALLFRGHFTANGKE-----KTFFVQTKGGTAYGHSIWINETYVGS 103 (182)
T ss_dssp SSCEEEEEEEECCSCC-----CEEEEEEECSTTCCEEEEETTEEEEE
T ss_pred CCcEEEEEeccCCccC-----CCEEEEEeCcEeeeeEEEECCEEEee
Confidence 4568999999987433 13445666677899999999999996
|
| >d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Outer surface protein, N-terminal domain domain: Outer surface protein, N-terminal domain species: Bacillus cereus [TaxId: 1396]
Probab=90.49 E-value=0.14 Score=48.00 Aligned_cols=71 Identities=18% Similarity=0.125 Sum_probs=51.3
Q ss_pred EEEeeCCCCCccchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceecc
Q 009890 45 SGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCA 121 (523)
Q Consensus 45 sG~iHy~R~~~~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~a 121 (523)
+=++++.+...+.-.+.|++|++.|+..|=| ++|.|+...=+- ...+..+++.|++.||.||+-+.|=+..
T Consensus 6 GiSvY~~~~~~e~~~~yi~~a~~~Gf~~iFT----SL~~~e~~~~~~--~~~~~~l~~~a~~~g~~vi~DIsp~~l~ 76 (244)
T d1x7fa2 6 GISLYPEHSTKEKDMAYISAAARHGFSRIFT----CLLSVNRPKEEI--VAEFKEIINHAKDNNMEVILDVAPAVFD 76 (244)
T ss_dssp EEEECGGGSCHHHHHHHHHHHHTTTEEEEEE----EECCC----------HHHHHHHHHHHHTTCEEEEEECTTCC-
T ss_pred EEEEccCCCCHHHHHHHHHHHHHCCCCEEEe----cCccCCCCHHHH--HHHHHHHHHHHHHCCCEEEEEcCHHHHH
Confidence 4467666677888889999999999988877 457776533222 2368899999999999999999885543
|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Archaeon Pyrococcus woesei [TaxId: 2262]
Probab=90.42 E-value=0.11 Score=50.00 Aligned_cols=59 Identities=15% Similarity=0.268 Sum_probs=40.6
Q ss_pred chHH---HHHHHHhCCCCEEEE-ccccCcCCCC---Ccee----------------eccCcchHHHHHHHHHHcCCEEEE
Q 009890 57 MWPD---LIQKSKDGGLDVIET-YVFWNLHEPV---RNQY----------------NFEGRYDLVKFVKLVAEAGLYAHL 113 (523)
Q Consensus 57 ~W~d---~l~k~Ka~GlN~V~t-YvfWn~HEp~---~G~y----------------dF~G~~dL~~fl~la~~~GL~Vil 113 (523)
.|+. .|.-+|++|+|+|-+ .|+-+..... =..+ .|.+..||.++++.|++.||+|||
T Consensus 26 ~~~gi~~kLdylk~LGv~~Iwl~Pv~~~~~~~~~~gY~~~dy~~~~~~~~~~~vd~~~Gt~~d~~~LV~~aH~~GikVIl 105 (361)
T d1mxga2 26 WWDHIRSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIA 105 (361)
T ss_dssp HHHHHHHHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHHHHHHhcCCCEEEeCcCeeCCCCCCCCCCCcccccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 4765 677789999999995 4653211000 0111 245567999999999999999998
Q ss_pred ec
Q 009890 114 RI 115 (523)
Q Consensus 114 r~ 115 (523)
-.
T Consensus 106 D~ 107 (361)
T d1mxga2 106 DV 107 (361)
T ss_dssp EE
T ss_pred Ee
Confidence 54
|
| >d1yq2a3 b.18.1.5 (A:4-219) beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: 192168]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Galactose-binding domain-like superfamily: Galactose-binding domain-like family: beta-Galactosidase/glucuronidase, N-terminal domain domain: beta-Galactosidase species: Arthrobacter sp. c2-2 [TaxId: 192168]
Probab=90.31 E-value=0.093 Score=47.89 Aligned_cols=43 Identities=12% Similarity=0.132 Sum_probs=35.6
Q ss_pred eEEEeEEEecCCCccccCCCeeEEEEeecCcEEEEEEcCeeeec
Q 009890 479 LWYSLSTNIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVGE 522 (523)
Q Consensus 479 LWY~T~v~i~~~~~~~~~~~~~~L~v~s~gh~lh~FVNg~~~G~ 522 (523)
-||...+++...-. .+.+++..|++....+...|||||+++|+
T Consensus 116 gwYr~~f~~p~~~~-~~~gk~i~L~F~gv~~~a~V~vNG~~vG~ 158 (216)
T d1yq2a3 116 GDFRRRFDVPAQWF-ESTTAALTLRFDGVESRYKVWVNGQEIGV 158 (216)
T ss_dssp EEEEEEEEECGGGG-STTEEEEEEEESCEESCEEEEETTEEEEE
T ss_pred cceEEEEEeccccc-ccCCcEEEEEEcccceeEEEEECCEEEeE
Confidence 49999999975311 23457899999999999999999999996
|
| >d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Plant alpha-amylase species: Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
Probab=90.19 E-value=1 Score=41.41 Aligned_cols=56 Identities=9% Similarity=0.015 Sum_probs=38.7
Q ss_pred HHHHHHHhCCCCEEEE-ccc-----cCc-----CCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCc
Q 009890 60 DLIQKSKDGGLDVIET-YVF-----WNL-----HEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGP 117 (523)
Q Consensus 60 d~l~k~Ka~GlN~V~t-Yvf-----Wn~-----HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GP 117 (523)
+.|.-+|++|+|+|.+ .++ |.+ ....|. .|.+..++.++++.|++.||+|||-.=|
T Consensus 25 ~kLdyl~~lGv~~i~L~Pi~~~~~~~gY~~~d~~~id~~--~~G~~~~f~~lv~~~H~~gi~VilD~V~ 91 (347)
T d1ht6a2 25 GKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDAS--KYGNAAELKSLIGALHGKGVQAIADIVI 91 (347)
T ss_dssp TTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGC--TTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HhHHHHHHcCCCEEEECCCCcCCCCCCCCccCcCcCCcc--cCCCHHHHHHHHHHHhhcceEEeeeccc
Confidence 3466679999999997 343 211 111111 1455678999999999999999988633
|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
Probab=90.18 E-value=0.084 Score=51.46 Aligned_cols=56 Identities=14% Similarity=0.137 Sum_probs=38.8
Q ss_pred HHHHHHHhCCCCEEEE-ccc-----------cCcCCCCCcee-----eccCcchHHHHHHHHHHcCCEEEEec
Q 009890 60 DLIQKSKDGGLDVIET-YVF-----------WNLHEPVRNQY-----NFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 60 d~l~k~Ka~GlN~V~t-Yvf-----------Wn~HEp~~G~y-----dF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
+.|.-+|++|+|+|.. .|+ |+.|--.+--| .|....+|.+|++.|+++||.|||-.
T Consensus 56 ~kLdyl~~LGv~~I~L~Pi~~~~~~~~~~~~~~~~gY~~~d~~~id~~~Gt~~d~k~Lv~~~H~~Gi~VilD~ 128 (407)
T d1qhoa4 56 QKLPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDF 128 (407)
T ss_dssp HTHHHHHHHTCCEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCccccCCcccCCCCCCCCCceeeeecCCCCCCCCCHHHHHHHHHHhhhcccceeecc
Confidence 4577799999999997 343 22221111111 13456789999999999999999964
|
| >d2vzsa4 b.18.1.5 (A:42-225) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Galactose-binding domain-like superfamily: Galactose-binding domain-like family: beta-Galactosidase/glucuronidase, N-terminal domain domain: Exochitosanase CsxA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=89.85 E-value=0.19 Score=44.82 Aligned_cols=38 Identities=24% Similarity=0.465 Sum_probs=32.9
Q ss_pred eEEEeEEEecCCCccccCCCeeEEEEeecCcEEEEEEcCeeeec
Q 009890 479 LWYSLSTNIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVGE 522 (523)
Q Consensus 479 LWY~T~v~i~~~~~~~~~~~~~~L~v~s~gh~lh~FVNg~~~G~ 522 (523)
.||.++|.+... +++..|+++...+...|||||++||+
T Consensus 80 ~wYr~~f~~~~~------~~~~~L~f~gv~~~a~V~lNG~~vg~ 117 (184)
T d2vzsa4 80 WWYRTDLNVDDT------SSRTYLDFSGVLSKADVWVNGTKVAT 117 (184)
T ss_dssp EEEEEEEEESCC------SSEEEEEECCEESBEEEEETTEEEEC
T ss_pred EEEEEeccCCCC------CCEEEEEeCcEEEEEEEEECCEEEEe
Confidence 499999998732 36789999999999999999999996
|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) species: Pseudomonas stutzeri [TaxId: 316]
Probab=89.82 E-value=0.26 Score=46.43 Aligned_cols=59 Identities=14% Similarity=0.206 Sum_probs=40.8
Q ss_pred HHHHHHHHhCCCCEEEEccccC-cCCC------------CCcee----eccCcchHHHHHHHHHHcCCEEEEecCc
Q 009890 59 PDLIQKSKDGGLDVIETYVFWN-LHEP------------VRNQY----NFEGRYDLVKFVKLVAEAGLYAHLRIGP 117 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~tYvfWn-~HEp------------~~G~y----dF~G~~dL~~fl~la~~~GL~Vilr~GP 117 (523)
.+.|.-+|++|+++|.+--++- .+.. .+..| .|.+..+|.++++.|++.||.||+-.=|
T Consensus 40 ~~kl~yl~~lGv~aIwl~P~~~~~~~~~~~~~~~~~hgY~~~dy~vd~~~Gt~~df~~LV~~aH~~GI~VIlD~V~ 115 (357)
T d1gcya2 40 RQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLYDVVP 115 (357)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHcCCCEEEeCcCeeCCccCCCCCCCCCCCCcChhhcccCccCCCHHHHHHHHHHHHhcCCeEEEEEec
Confidence 4567788999999999753321 1111 11112 2455679999999999999999998744
|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Halothermothrix orenii [TaxId: 31909]
Probab=89.61 E-value=0.11 Score=49.70 Aligned_cols=62 Identities=19% Similarity=0.217 Sum_probs=42.2
Q ss_pred cchHHHHHHH-----------HhCCCCEEEE-ccc--cCcCCCCCcee-----eccCcchHHHHHHHHHHcCCEEEEecC
Q 009890 56 EMWPDLIQKS-----------KDGGLDVIET-YVF--WNLHEPVRNQY-----NFEGRYDLVKFVKLVAEAGLYAHLRIG 116 (523)
Q Consensus 56 ~~W~d~l~k~-----------Ka~GlN~V~t-Yvf--Wn~HEp~~G~y-----dF~G~~dL~~fl~la~~~GL~Vilr~G 116 (523)
...+.++.|+ |++|+|+|.+ .|+ -+.|--.+..| .|.+..+|.+|++.|+++||.|||-.=
T Consensus 24 Gd~~g~~~kLdyl~~~~~~~i~~LGv~~i~l~Pi~~~~~~~GY~~~d~~~vd~~~G~~~dlk~lv~~~H~~Gi~VilD~V 103 (409)
T d1wzaa2 24 GDLKGIIEKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDLP 103 (409)
T ss_dssp CCHHHHHHTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred cCHHHHHHhccccccccccHHhhcCccEEEECCCCCCCCCCCcCcccCCCcCcccCCHHHHHHHHHHHHhcCCEEEEecc
Confidence 3567777776 8999999987 342 11111111111 245667999999999999999998863
Q ss_pred c
Q 009890 117 P 117 (523)
Q Consensus 117 P 117 (523)
|
T Consensus 104 ~ 104 (409)
T d1wzaa2 104 I 104 (409)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]
Probab=89.38 E-value=0.12 Score=49.85 Aligned_cols=68 Identities=12% Similarity=0.080 Sum_probs=42.2
Q ss_pred eeCCCCCccchHHHHHH-HHhCCCCEEEEc-cccCcCCCCC---ceee---------ccCcchHHHHHHHHHHcCCEEEE
Q 009890 48 IHYPRSTPEMWPDLIQK-SKDGGLDVIETY-VFWNLHEPVR---NQYN---------FEGRYDLVKFVKLVAEAGLYAHL 113 (523)
Q Consensus 48 iHy~R~~~~~W~d~l~k-~Ka~GlN~V~tY-vfWn~HEp~~---G~yd---------F~G~~dL~~fl~la~~~GL~Vil 113 (523)
+|.|-++=..-.+.|.. +|++|+++|++- +.=+...+.. +.|+ |....||.++++.|++.||.|||
T Consensus 14 ~~~f~W~~~~i~~~~~~yl~~lG~tai~l~P~~e~~~~~~~~~~~~Y~~~dY~id~~~Gt~~df~~LV~~aH~~GI~Vil 93 (378)
T d1jaea2 14 VHLFEWKWNDIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSYIINTRSGDESAFTDMTRRCNDAGVRIYV 93 (378)
T ss_dssp EEETTCCHHHHHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEETTEEHHHHHHHHHHHHHTTCEEEE
T ss_pred EEeccCcHHHHHHHHHHHHHHhCCCEEEeCcccccCCCCCCCCccccCCccceeCCCCCCHHHHHHHHHHHHhcCceeee
Confidence 56666652222334554 678999999973 3211100000 1232 34456999999999999999998
Q ss_pred ec
Q 009890 114 RI 115 (523)
Q Consensus 114 r~ 115 (523)
-.
T Consensus 94 Dv 95 (378)
T d1jaea2 94 DA 95 (378)
T ss_dssp EE
T ss_pred ee
Confidence 74
|
| >d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]
Probab=88.90 E-value=0.27 Score=46.73 Aligned_cols=65 Identities=15% Similarity=0.216 Sum_probs=42.3
Q ss_pred eeCCCCCccchHHHHHH----HHhCCCCEEEEccccCcCCCCC--ceee---------ccCcchHHHHHHHHHHcCCEEE
Q 009890 48 IHYPRSTPEMWPDLIQK----SKDGGLDVIETYVFWNLHEPVR--NQYN---------FEGRYDLVKFVKLVAEAGLYAH 112 (523)
Q Consensus 48 iHy~R~~~~~W~d~l~k----~Ka~GlN~V~tYvfWn~HEp~~--G~yd---------F~G~~dL~~fl~la~~~GL~Vi 112 (523)
+|.|-++ |.++.++ +|++|+++|.+-=+.-.....+ .-|+ |.+..+|.++++.|++.||.||
T Consensus 6 ~~~f~w~---~~~i~~~~~dyl~~lG~tai~l~P~~~~~~~~~~y~gY~~~dy~vd~~~Gt~~dfk~LV~~aH~~GI~Vi 82 (354)
T d1g94a2 6 VHLFEWN---WQDVAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYELQSRGGNRAQFIDMVNRCSAAGVDIY 82 (354)
T ss_dssp EEETTCC---HHHHHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEE
T ss_pred EEcccCC---HHHHHHHHHHHHHHcCCCEEEeCcCccCCCCCCCcccCCCCcceeCCCCCCHHHHHHHHHHHhccCceeE
Confidence 4555553 7766443 6889999999853211100000 0232 3456799999999999999999
Q ss_pred Eec
Q 009890 113 LRI 115 (523)
Q Consensus 113 lr~ 115 (523)
|-.
T Consensus 83 lDv 85 (354)
T d1g94a2 83 VDT 85 (354)
T ss_dssp EEE
T ss_pred EEe
Confidence 874
|
| >d2q02a1 c.1.15.4 (A:1-271) Putative cytoplasmic protein STM4435 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: IolI-like domain: Putative cytoplasmic protein STM4435 species: Salmonella typhimurium [TaxId: 90371]
Probab=88.45 E-value=2.4 Score=38.36 Aligned_cols=49 Identities=12% Similarity=0.034 Sum_probs=35.0
Q ss_pred chHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEE
Q 009890 57 MWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAH 112 (523)
Q Consensus 57 ~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vi 112 (523)
-.++.|+.++++|++.|+. |+.+-..+ +........+-++++++||.++
T Consensus 19 ~lee~l~~a~~~G~dgiEl---~~~~~~~~----~~~~~~~~~~k~~l~~~gl~i~ 67 (271)
T d2q02a1 19 SIEAFFRLVKRLEFNKVEL---RNDMPSGS----VTDDLNYNQVRNLAEKYGLEIV 67 (271)
T ss_dssp CHHHHHHHHHHTTCCEEEE---ETTSTTSS----TTTTCCHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHhCCCEEEE---ecCccccc----ccccCCHHHHHHHHHHcCCcEE
Confidence 4678899999999999998 44322111 1112357888899999999875
|
| >d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 1,4-alpha-glucan branching enzyme, central domain species: Escherichia coli [TaxId: 562]
Probab=88.35 E-value=0.62 Score=43.39 Aligned_cols=59 Identities=20% Similarity=0.144 Sum_probs=40.0
Q ss_pred chHHHH----HHHHhCCCCEEEE-ccc----cCcCCCCCcee-----eccCcchHHHHHHHHHHcCCEEEEec
Q 009890 57 MWPDLI----QKSKDGGLDVIET-YVF----WNLHEPVRNQY-----NFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 57 ~W~d~l----~k~Ka~GlN~V~t-Yvf----Wn~HEp~~G~y-----dF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
-|++++ .-+|++|+|+|.+ .|+ .+.|--.+--| .|....||.++++.|++.||+||+-.
T Consensus 38 ~~~gi~~klidyl~~LGv~~iwl~Pi~~~~~~~~hGY~~~d~~~vdp~~Gt~~d~~~LV~~aH~~gi~VilD~ 110 (396)
T d1m7xa3 38 SYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDW 110 (396)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCcCcCcCCCcCcccCCHHHHHHHHHHHhhhhhhhhhcc
Confidence 366655 4569999999997 342 11221111111 25667899999999999999999875
|
| >d1jz8a3 b.18.1.5 (A:13-219) beta-Galactosidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Galactose-binding domain-like superfamily: Galactose-binding domain-like family: beta-Galactosidase/glucuronidase, N-terminal domain domain: beta-Galactosidase species: Escherichia coli [TaxId: 562]
Probab=88.21 E-value=0.15 Score=45.99 Aligned_cols=42 Identities=26% Similarity=0.385 Sum_probs=35.2
Q ss_pred eeEEEeEEEecCCCccccCCCeeEEEEeecCcEEEEEEcCeeeec
Q 009890 478 YLWYSLSTNIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVGE 522 (523)
Q Consensus 478 YLWY~T~v~i~~~~~~~~~~~~~~L~v~s~gh~lh~FVNg~~~G~ 522 (523)
=.||.+++.|..+ + +.|++..|++........|||||+++|+
T Consensus 108 ~~wY~r~f~ip~~--~-~~~~~i~L~f~gv~~~a~V~vNG~~vG~ 149 (207)
T d1jz8a3 108 TGCYSLTFNVDES--W-LQEGQTRIIFDGVNSAFHLWCNGRWVGY 149 (207)
T ss_dssp EEEEEEEEEECHH--H-HSSSEEEEEESCEESEEEEEETTEEEEE
T ss_pred eEEEEEEeEeccc--c-cCCCEEEEEecccceEEEEEECCEEEEE
Confidence 3699999999633 2 2358899999999999999999999995
|
| >d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isoamylase, central domain species: Pseudomonas amyloderamosa [TaxId: 32043]
Probab=88.11 E-value=0.88 Score=44.44 Aligned_cols=56 Identities=13% Similarity=0.095 Sum_probs=37.8
Q ss_pred HHHHHHHhCCCCEEEE-ccccCcCCCCCce-----------ee----------c-------cCcchHHHHHHHHHHcCCE
Q 009890 60 DLIQKSKDGGLDVIET-YVFWNLHEPVRNQ-----------YN----------F-------EGRYDLVKFVKLVAEAGLY 110 (523)
Q Consensus 60 d~l~k~Ka~GlN~V~t-YvfWn~HEp~~G~-----------yd----------F-------~G~~dL~~fl~la~~~GL~ 110 (523)
+.|.-+|++|+|+|.+ .|+-.......|. |+ | ....||.+|++.|++.||.
T Consensus 47 ~kLdyl~~LGvnaiwl~Pi~~~~~~~~~~~~~~~~~~~y~GY~~~d~~~vdp~y~~~~~~~Gt~~d~~~LV~~aH~~GIr 126 (475)
T d1bf2a3 47 LKASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIK 126 (475)
T ss_dssp HTHHHHHHHTCCEEEESCCBCBSCTTTTSSTTCCTTCCCSCCCBSCSSCBCGGGCSCCSTTHHHHHHHHHHHHHHHTTCE
T ss_pred hhhHHHHHcCCCEEEeCCCCcCCCcccccccccccCcCCCCCCcccCCCcCcccccCCCCCCCHHHHHHHHHHHHhcCcE
Confidence 4566689999999997 4543322221110 21 2 2245799999999999999
Q ss_pred EEEec
Q 009890 111 AHLRI 115 (523)
Q Consensus 111 Vilr~ 115 (523)
||+-+
T Consensus 127 VilD~ 131 (475)
T d1bf2a3 127 VYMDV 131 (475)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99875
|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
Probab=88.07 E-value=1.1 Score=42.34 Aligned_cols=56 Identities=16% Similarity=0.176 Sum_probs=39.0
Q ss_pred HHHHHHHHhCCCCEEEE-ccc--cCcCCCCCcee-----eccCcchHHHHHHHHHHcCCEEEEe
Q 009890 59 PDLIQKSKDGGLDVIET-YVF--WNLHEPVRNQY-----NFEGRYDLVKFVKLVAEAGLYAHLR 114 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~t-Yvf--Wn~HEp~~G~y-----dF~G~~dL~~fl~la~~~GL~Vilr 114 (523)
.+.|.-+|++|+|+|.+ .|+ ...|--.+..| .|....++..+++.|++.||.||+-
T Consensus 56 ~~kLdyl~~lGi~~I~l~Pv~~~~~~~gY~~~~~~~vd~~~Gt~~d~~~lv~~~H~~Gi~vilD 119 (382)
T d1wzla3 56 IDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILD 119 (382)
T ss_dssp HHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHhhHHHHHCCCCEEEECCcCCCCcccCCccccccccccCCCCHHHHHHHHHHHHhcccceEee
Confidence 35677889999999996 453 12221122211 1345679999999999999999986
|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]
Probab=87.65 E-value=0.29 Score=47.31 Aligned_cols=68 Identities=10% Similarity=0.175 Sum_probs=43.8
Q ss_pred eeCCCCC----ccchH---HHHHHHHhCCCCEEEE-ccccCcCCCCCc-----ee-------------eccCcchHHHHH
Q 009890 48 IHYPRST----PEMWP---DLIQKSKDGGLDVIET-YVFWNLHEPVRN-----QY-------------NFEGRYDLVKFV 101 (523)
Q Consensus 48 iHy~R~~----~~~W~---d~l~k~Ka~GlN~V~t-YvfWn~HEp~~G-----~y-------------dF~G~~dL~~fl 101 (523)
+|+|-+. ...|+ +.|.-+|++|+++|.+ .++=+..+..-| -| .|.+..|+.+++
T Consensus 6 ~~~f~w~~~~~gg~~~gi~~kLdylk~LGvtaI~L~Pi~~~~~~~~~gy~~~~~Y~~~~~~~~~~vd~~~Gt~~df~~Lv 85 (393)
T d1e43a2 6 MQYFEWYTPNDGQHWKRLQNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAI 85 (393)
T ss_dssp EECCCTTCCSSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHH
T ss_pred EEeEecCCCCCCCCHHHHHHHHHHHHHcCCCEEEeCcCccCCCCCCCCCCcccCcccccccccCccCCCCCCHHHHHHHH
Confidence 5666541 12465 4566679999999997 343111111100 11 244567999999
Q ss_pred HHHHHcCCEEEEec
Q 009890 102 KLVAEAGLYAHLRI 115 (523)
Q Consensus 102 ~la~~~GL~Vilr~ 115 (523)
+.|++.||+||+-.
T Consensus 86 ~~~H~~Gi~VilD~ 99 (393)
T d1e43a2 86 GSLHSRNVQVYGDV 99 (393)
T ss_dssp HHHHHTTCEEEEEE
T ss_pred HHHHHcCCEEEEEE
Confidence 99999999999876
|
| >d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltosyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=87.52 E-value=0.21 Score=50.42 Aligned_cols=56 Identities=21% Similarity=0.138 Sum_probs=38.0
Q ss_pred HHHHHHHhCCCCEEEE-ccccCcCCCCCce----e------------------eccCcchHHHHHHHHHHcCCEEEEec
Q 009890 60 DLIQKSKDGGLDVIET-YVFWNLHEPVRNQ----Y------------------NFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 60 d~l~k~Ka~GlN~V~t-YvfWn~HEp~~G~----y------------------dF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
+.|.-+|++|+|+|.+ .|+=.......|. | .|....++.++++.|++.||.|||-.
T Consensus 124 ~kLdYLk~LGvtaI~L~Pi~~~~~~~~~~~~~~GY~~~dy~~~dp~~~~~~~~~~Gt~~dfk~lV~~~H~~GI~VIlDv 202 (572)
T d1gjwa2 124 LLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIRVILDF 202 (572)
T ss_dssp HTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEeCCcccCccccCCCCCCCCCCccCCCCCCcccccccccCCCCHHHHHHHHHHHHhcCcEEEEEe
Confidence 4567889999999997 4541111101110 1 13445789999999999999999876
|
| >d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isomaltulose synthase PalI species: Klebsiella sp., lx3 [TaxId: 576]
Probab=86.85 E-value=0.36 Score=47.43 Aligned_cols=56 Identities=13% Similarity=0.116 Sum_probs=38.7
Q ss_pred HHHHHHHhCCCCEEEE-ccc---cCcCCCCCcee-----eccCcchHHHHHHHHHHcCCEEEEec
Q 009890 60 DLIQKSKDGGLDVIET-YVF---WNLHEPVRNQY-----NFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 60 d~l~k~Ka~GlN~V~t-Yvf---Wn~HEp~~G~y-----dF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
+.|.-+|++|+|+|.+ .|+ ...|--.+-.| .|.+..++.++++.|++.||+|||-.
T Consensus 35 ~kLdyLk~LGv~~I~L~Pi~~~~~~~~GY~~~d~~~vd~~~Gt~~df~~Lv~~aH~~Gi~VilD~ 99 (478)
T d1m53a2 35 EKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDV 99 (478)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCCCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEecc
Confidence 3455589999999997 343 22221111111 25567899999999999999999886
|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus oryzae, Taka-amylase [TaxId: 5062]
Probab=86.48 E-value=0.35 Score=46.70 Aligned_cols=57 Identities=19% Similarity=0.244 Sum_probs=40.2
Q ss_pred HHHHHHHHhCCCCEEEE-ccccCcCCCC----------Ccee-----eccCcchHHHHHHHHHHcCCEEEEec
Q 009890 59 PDLIQKSKDGGLDVIET-YVFWNLHEPV----------RNQY-----NFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~t-YvfWn~HEp~----------~G~y-----dF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
.+.|.-+|++|+|+|.+ .++-+..... +..| .|.+..++.+|++.|+++||.||+-.
T Consensus 46 ~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~~~~~~~~gY~~~d~~~vd~~~Gt~~dfk~lv~~~H~~Gi~VilD~ 118 (381)
T d2guya2 46 IDKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDV 118 (381)
T ss_dssp HHTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhHHHHHHCCCCEEEeCCCCCCCcccCCCCCCCCCcccccccccccCCCCHHHHHHHHHHHHhhccceeeec
Confidence 35677789999999996 4543221111 1111 25667899999999999999999885
|
| >d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Thermoanaerobacterium [TaxId: 28895]
Probab=86.45 E-value=0.25 Score=47.81 Aligned_cols=60 Identities=15% Similarity=0.203 Sum_probs=40.9
Q ss_pred cchHHHHHH-----HHhCCCCEEEE-ccccC---------------cCCCCCcee-----eccCcchHHHHHHHHHHcCC
Q 009890 56 EMWPDLIQK-----SKDGGLDVIET-YVFWN---------------LHEPVRNQY-----NFEGRYDLVKFVKLVAEAGL 109 (523)
Q Consensus 56 ~~W~d~l~k-----~Ka~GlN~V~t-YvfWn---------------~HEp~~G~y-----dF~G~~dL~~fl~la~~~GL 109 (523)
.-+..+++| +|++|+|+|.. .++=+ .|--.+-.| .|.+..+|.+|++.|+++||
T Consensus 52 Gdl~Gi~~kLd~~YLk~LGv~~I~L~Pi~~~~~~~~~~~~~~~~~~~~gY~~~d~~~vdp~~Gt~~dfk~LV~~aH~~Gi 131 (406)
T d3bmva4 52 GDWQGIINKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNI 131 (406)
T ss_dssp CCHHHHHHHHHTSTTGGGTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHhcCHHHHHHcCCCEEEECCcccccccccCCCCCCCChhhcCcccccccccCcccccHHHHHHHHHHHHhccc
Confidence 346667776 59999999997 44321 111111111 14566799999999999999
Q ss_pred EEEEec
Q 009890 110 YAHLRI 115 (523)
Q Consensus 110 ~Vilr~ 115 (523)
.|||-.
T Consensus 132 ~VilD~ 137 (406)
T d3bmva4 132 KVIIDF 137 (406)
T ss_dssp EEEEEE
T ss_pred cceeee
Confidence 999885
|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus niger, acid amylase [TaxId: 5061]
Probab=86.29 E-value=0.3 Score=47.18 Aligned_cols=58 Identities=16% Similarity=0.176 Sum_probs=40.1
Q ss_pred HHHHHHHHhCCCCEEEE-ccccCcCCCC-Cc---------e-----eeccCcchHHHHHHHHHHcCCEEEEecC
Q 009890 59 PDLIQKSKDGGLDVIET-YVFWNLHEPV-RN---------Q-----YNFEGRYDLVKFVKLVAEAGLYAHLRIG 116 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~t-YvfWn~HEp~-~G---------~-----ydF~G~~dL~~fl~la~~~GL~Vilr~G 116 (523)
.+.|..+|++|+|+|.+ .|+=+.++.. +| . -.+.+..+|.+|++.|++.||.|||-.=
T Consensus 46 ~~kLdyL~~LGv~~I~L~Pi~~~~~~~~~~~~~~~gY~~~d~~~id~~~Gt~~~~k~lv~~aH~~Gi~VilD~V 119 (381)
T d2aaaa2 46 IDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDVV 119 (381)
T ss_dssp HHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEeCCCccCCccCCCCCCCCcccccccccccccccCCHHHHHHHHHHHhhhhhccccccc
Confidence 36778899999999996 4531111111 11 1 1245567999999999999999998753
|
| >d1k77a_ c.1.15.5 (A:) Hypothetical protein YgbM (EC1530) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: Hypothetical protein YgbM (EC1530) domain: Hypothetical protein YgbM (EC1530) species: Escherichia coli [TaxId: 562]
Probab=85.68 E-value=3 Score=36.43 Aligned_cols=81 Identities=11% Similarity=0.007 Sum_probs=50.7
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEEEecCceeccccCCCCCCccccCC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAHLRIGPYVCAEWNFGGFPLWLHFI 135 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vilr~GPyi~aEw~~GG~P~WL~~~ 135 (523)
--+++.|+.+|++|++.|++..+ +++ ++..+-+++++.||.+...-.|.. .+...
T Consensus 15 ~pl~e~i~~a~~~Gf~gIEl~~~----------~~~----~~~~~~~~l~~~gl~~~~~~~~~~-----------~~~~~ 69 (260)
T d1k77a_ 15 VPFIERFAAARKAGFDAVEFLFP----------YNY----STLQIQKQLEQNHLTLALFNTAPG-----------DINAG 69 (260)
T ss_dssp SCGGGHHHHHHHHTCSEEECSCC----------TTS----CHHHHHHHHHHTTCEEEEEECCCC-----------CGGGT
T ss_pred CCHHHHHHHHHHhCCCEEEECCC----------CCC----CHHHHHHHHHHCCCcEEEEecccc-----------ccccc
Confidence 34789999999999999996321 222 578888999999999875433211 11111
Q ss_pred CCeeeecCChhHHHHHHHHHHHHHHHHH
Q 009890 136 PGIQFRTDNEPFKAEMQRFTAKIVDMMK 163 (523)
Q Consensus 136 p~i~~Rt~d~~fl~~~~~~~~~i~~~ik 163 (523)
. .....++...+...+..++.....+
T Consensus 70 ~--~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (260)
T d1k77a_ 70 E--WGLSALPGREHEAHADIDLALEYAL 95 (260)
T ss_dssp C--SCSTTCTTCHHHHHHHHHHHHHHHH
T ss_pred c--cccccCHHHHHHHHHHHHHHHHHHH
Confidence 1 1223455556666666666555555
|
| >d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Oligo-1,6, glucosidase species: Bacillus cereus [TaxId: 1396]
Probab=85.37 E-value=0.42 Score=46.90 Aligned_cols=55 Identities=18% Similarity=0.181 Sum_probs=38.6
Q ss_pred HHHHHHhCCCCEEEE-ccc---cCcCCCCCcee-----eccCcchHHHHHHHHHHcCCEEEEec
Q 009890 61 LIQKSKDGGLDVIET-YVF---WNLHEPVRNQY-----NFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 61 ~l~k~Ka~GlN~V~t-Yvf---Wn~HEp~~G~y-----dF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
.|.-+|++|+|+|.+ .|+ ...|---+-.| .|.+..|+.++++.|++.||+|||-.
T Consensus 36 kLdYLk~LGv~~I~l~Pi~~~~~~~~GY~~~d~~~vd~~~Gt~~df~~Lv~~aH~~Gi~VilD~ 99 (479)
T d1uoka2 36 KLDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDL 99 (479)
T ss_dssp THHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhHHHHHcCCCEEEECCCcCCCCCCCCcCccccCCcCcccCCHHHHHHHHHHHHHCCCEEEecc
Confidence 455689999999987 343 22221111111 25667899999999999999999985
|
| >d1i60a_ c.1.15.4 (A:) Hypothetical protein IolI {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: IolI-like domain: Hypothetical protein IolI species: Bacillus subtilis [TaxId: 1423]
Probab=85.31 E-value=1.5 Score=39.90 Aligned_cols=124 Identities=11% Similarity=0.049 Sum_probs=70.5
Q ss_pred cchHHHHHHHHhCCCCEEEEccccCcCCCCCceeeccCcchHHHHHHHHHHcCCEEE-EecCceeccccCCCCCCccccC
Q 009890 56 EMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRYDLVKFVKLVAEAGLYAH-LRIGPYVCAEWNFGGFPLWLHF 134 (523)
Q Consensus 56 ~~W~d~l~k~Ka~GlN~V~tYvfWn~HEp~~G~ydF~G~~dL~~fl~la~~~GL~Vi-lr~GPyi~aEw~~GG~P~WL~~ 134 (523)
.-+++.|+.++++|++.|+.... .. .+ ++.....+..+-++++++||.++ +.+.. +
T Consensus 14 ~~l~~~l~~a~~~Gf~~IEl~~~-~~---~~---~~~~~~~~~~l~~~l~~~gl~i~~~~~~~---------~------- 70 (278)
T d1i60a_ 14 SNLKLDLELCEKHGYDYIEIRTM-DK---LP---EYLKDHSLDDLAEYFQTHHIKPLALNALV---------F------- 70 (278)
T ss_dssp CCHHHHHHHHHHTTCSEEEEETT-TH---HH---HHTTSSCHHHHHHHHHTSSCEEEEEEEEE---------C-------
T ss_pred CCHHHHHHHHHHHCcCEEEeCCc-cc---cc---cccCcccHHHHHHHHHHcCCcEEEEecCC---------C-------
Confidence 35789999999999999998532 11 11 12223468899999999999977 33210 0
Q ss_pred CCCeeeecCChhHHHHHHHHHHHHHHHHHhcccccccCCceEeccccccccccccc-cCcccHHHHHHHHHHHHhcCCCc
Q 009890 135 IPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSA-YGAAGKSYIKWAAGMALSLDTGV 213 (523)
Q Consensus 135 ~p~i~~Rt~d~~fl~~~~~~~~~i~~~ik~~~l~~~~gGpII~~QIENEyg~~~~~-~g~~~~~y~~~l~~~~~~~g~~v 213 (523)
+-..++.-++..-+.+++.++..+ .| |.+.|.+............ .-..-.+-++.+.++|++.|+.+
T Consensus 71 -----~~~~~~~~~~~~~~~~~~~i~~a~--~l----G~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l 139 (278)
T d1i60a_ 71 -----FNNRDEKGHNEIITEFKGMMETCK--TL----GVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKI 139 (278)
T ss_dssp -----CSSCCHHHHHHHHHHHHHHHHHHH--HH----TCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHH--Hc----CCCccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCee
Confidence 111234444555566666667666 33 5566654422211110000 00011234677778888888765
|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Neopullulanase, central domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=85.12 E-value=1.5 Score=41.42 Aligned_cols=59 Identities=17% Similarity=0.126 Sum_probs=39.3
Q ss_pred hHHHHHHHHhCCCCEEEE-ccc-----cCcCCCCCc--eeeccCcchHHHHHHHHHHcCCEEEEecC
Q 009890 58 WPDLIQKSKDGGLDVIET-YVF-----WNLHEPVRN--QYNFEGRYDLVKFVKLVAEAGLYAHLRIG 116 (523)
Q Consensus 58 W~d~l~k~Ka~GlN~V~t-Yvf-----Wn~HEp~~G--~ydF~G~~dL~~fl~la~~~GL~Vilr~G 116 (523)
..+.|.-+|++|+|+|.+ .|+ |.+.----- .-.|....++.++++.|++.||.||+-.=
T Consensus 55 i~~kldyl~~LGv~~i~L~Pi~~~~~~~gy~~~d~~~vd~~~Gt~~~~~~lv~~aH~~Gi~VilD~V 121 (382)
T d1j0ha3 55 IIDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAV 121 (382)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHhHHHHHHcCCCEEEeCCCCcCCcccCCCcccccccCCCCCCHHHHHHHHHHhhhccceEEEEee
Confidence 456677899999999996 443 111000000 00134456899999999999999998863
|
| >d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclomaltodextrinase, central domain species: Flavobacterium sp. 92 [TaxId: 197856]
Probab=84.99 E-value=1.7 Score=41.49 Aligned_cols=58 Identities=10% Similarity=0.045 Sum_probs=40.1
Q ss_pred HHHHHHHHhCCCCEEEE-ccccCcCCCCC--c--eee-------ccCcchHHHHHHHHHHcCCEEEEecC
Q 009890 59 PDLIQKSKDGGLDVIET-YVFWNLHEPVR--N--QYN-------FEGRYDLVKFVKLVAEAGLYAHLRIG 116 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~t-YvfWn~HEp~~--G--~yd-------F~G~~dL~~fl~la~~~GL~Vilr~G 116 (523)
.+.|.-+|++|+|+|.+ .|+-+-..+.. | ..| |....++.++++.|++.||+|||-.=
T Consensus 56 ~~kLdyl~~LGv~~I~l~Pi~~~~~~~~~~~GY~~~d~~~vd~~~Gt~~df~~lv~~~H~~Gi~VilD~V 125 (422)
T d1h3ga3 56 IDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVV 125 (422)
T ss_dssp HHTHHHHHHHTCCEEEECCCEECCCSSCGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHhHHHHHHCCCCEEEeCCcccCCCCCCCCCCCCccccCCcccccCCHHHHHHHHHHHHHhCccccccCc
Confidence 35677799999999996 45422111110 1 222 34567999999999999999998873
|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 4-alpha-glucanotransferase species: Thermotoga maritima [TaxId: 2336]
Probab=84.04 E-value=0.4 Score=45.79 Aligned_cols=56 Identities=14% Similarity=0.295 Sum_probs=39.2
Q ss_pred HHHHHHHhCCCCEEEE-cccc--CcCCCCCcee-----eccCcchHHHHHHHHHHcCCEEEEec
Q 009890 60 DLIQKSKDGGLDVIET-YVFW--NLHEPVRNQY-----NFEGRYDLVKFVKLVAEAGLYAHLRI 115 (523)
Q Consensus 60 d~l~k~Ka~GlN~V~t-YvfW--n~HEp~~G~y-----dF~G~~dL~~fl~la~~~GL~Vilr~ 115 (523)
+.|.-+|++|+|+|.+ .|+= +.|--.+--| .|....|+.++++.|++.||.||+-.
T Consensus 27 ~kLdyl~~LGv~~I~l~Pi~~~~~~~GY~~~d~~~vd~~~Gt~~d~~~lv~~~h~~gi~VilD~ 90 (391)
T d1lwha2 27 NAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDL 90 (391)
T ss_dssp HTHHHHHHTTCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCCCCCCCCCCCccCCCCcCcccCCHHHHHHHHHHHHhcCCEEeecc
Confidence 5677789999999986 4541 1121111111 24556799999999999999999875
|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Bacillus sp., cyclomaltodextrinase [TaxId: 1409]
Probab=83.64 E-value=0.45 Score=45.14 Aligned_cols=58 Identities=21% Similarity=0.213 Sum_probs=38.9
Q ss_pred HHHHHHHHhCCCCEEEE-ccc--cCcCCCCCce-----eeccCcchHHHHHHHHHHcCCEEEEecC
Q 009890 59 PDLIQKSKDGGLDVIET-YVF--WNLHEPVRNQ-----YNFEGRYDLVKFVKLVAEAGLYAHLRIG 116 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~t-Yvf--Wn~HEp~~G~-----ydF~G~~dL~~fl~la~~~GL~Vilr~G 116 (523)
.+.|.-+|++|+|+|.+ .|+ ...|--.+.. -.|.+..++.++++.|+++||.||+-.=
T Consensus 54 ~~kLdylk~LGv~~i~l~Pi~~~~~~~gY~~~~~~~id~~~Gt~~df~~lv~~~h~~gi~VilD~V 119 (382)
T d1ea9c3 54 IDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAV 119 (382)
T ss_dssp HHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECC
T ss_pred HHhhHHHHhCCCCEEEeCCCccCCCCCCCCcccccccccccCCHHHHHHHHHHHHhhcceEEEeee
Confidence 34466789999999996 343 1111111111 1244567999999999999999998873
|
| >d2je8a4 b.18.1.5 (A:28-219) Beta-mannosidase {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Galactose-binding domain-like superfamily: Galactose-binding domain-like family: beta-Galactosidase/glucuronidase, N-terminal domain domain: Beta-mannosidase species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=83.29 E-value=0.43 Score=42.13 Aligned_cols=41 Identities=17% Similarity=0.227 Sum_probs=33.7
Q ss_pred eEEEeEEEecCCCccccCCCeeEEEEeecCcEEEEEEcCeeeec
Q 009890 479 LWYSLSTNIKADEPLLEDGSKTVLHVQSLGHALHAFINGKLVGE 522 (523)
Q Consensus 479 LWY~T~v~i~~~~~~~~~~~~~~L~v~s~gh~lh~FVNg~~~G~ 522 (523)
-||.+++.+..+. ..++...|+++...+..-|||||+++|+
T Consensus 62 ~~y~~~f~~p~~~---~~~~~v~L~f~gv~~~a~V~vNG~~vG~ 102 (192)
T d2je8a4 62 WEYRTSFIVSEEQ---LNRDGIQLIFEGLDTYADVYLNGSLLLK 102 (192)
T ss_dssp EEEEEEEEECHHH---HTSSEEEEEESCCBSEEEEEETTEEEEE
T ss_pred ceEEEEEECCHHH---cCCCeEEEECCCcceeeEEEECCEEEee
Confidence 4899999986432 2346788999999999999999999996
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| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Deinococcus radiodurans [TaxId: 1299]
Probab=81.69 E-value=2.1 Score=41.11 Aligned_cols=59 Identities=15% Similarity=0.176 Sum_probs=39.3
Q ss_pred HHHHHHHHhCCCCEEEE-ccc-cCcCC---CCCcee-----eccCcchHHHHHHHHHHcCCEEEEecCc
Q 009890 59 PDLIQKSKDGGLDVIET-YVF-WNLHE---PVRNQY-----NFEGRYDLVKFVKLVAEAGLYAHLRIGP 117 (523)
Q Consensus 59 ~d~l~k~Ka~GlN~V~t-Yvf-Wn~HE---p~~G~y-----dF~G~~dL~~fl~la~~~GL~Vilr~GP 117 (523)
.+.|.-+|++|+|+|.+ .|+ +.... -.+--| .|....||.+|++.|++.||.|||-.=|
T Consensus 37 ~~~ldyl~~LGv~~i~L~Pv~~~~~~~~~GY~~~d~~~vdp~~G~~~d~~~lv~~aH~~gi~VilD~V~ 105 (420)
T d2bhua3 37 AEKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLGVFLDVVY 105 (420)
T ss_dssp HHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHhHHHHHHcCCCEEEeCCCCcCCCCCCCCCCcccCCCcCcccCCHHHHHHHHHHHHhccccccccccc
Confidence 45677789999999996 343 11000 001011 1345579999999999999999998644
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| >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=81.34 E-value=0.81 Score=44.00 Aligned_cols=64 Identities=13% Similarity=0.152 Sum_probs=41.7
Q ss_pred eCCCCCccchHHHHH---H-HHhCCCCEEEEc-cccCc----------CCCCCceee----ccCcchHHHHHHHHHHcCC
Q 009890 49 HYPRSTPEMWPDLIQ---K-SKDGGLDVIETY-VFWNL----------HEPVRNQYN----FEGRYDLVKFVKLVAEAGL 109 (523)
Q Consensus 49 Hy~R~~~~~W~d~l~---k-~Ka~GlN~V~tY-vfWn~----------HEp~~G~yd----F~G~~dL~~fl~la~~~GL 109 (523)
|.|-++ |.++.+ . ++++|+++|.+- +.=+. |--.|-.|. |.+..||.++++.|+++||
T Consensus 15 ~~f~w~---~~~i~~e~~~yL~~lG~taIwl~P~~e~~~~~~~~~~~y~gY~~~dY~v~~~~Gt~~dfk~Lv~~aH~~GI 91 (403)
T d1hx0a2 15 HLFEWR---WVDIALECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPVSYKLCTRSGNENEFRDMVTRCNNVGV 91 (403)
T ss_dssp EETTCC---HHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTC
T ss_pred EeecCc---HHHHHHHHHHHHHHhCCCEEEeCcCccCccCCCCCCCCceeecCCCCccCCCCCCHHHHHHHHHHHHhcCC
Confidence 555553 776643 3 789999999974 31110 111111122 4556799999999999999
Q ss_pred EEEEec
Q 009890 110 YAHLRI 115 (523)
Q Consensus 110 ~Vilr~ 115 (523)
+|||-.
T Consensus 92 ~VIlDv 97 (403)
T d1hx0a2 92 RIYVDA 97 (403)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999874
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