Citrus Sinensis ID: 009919
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 522 | 2.2.26 [Sep-21-2011] | |||||||
| Q0WSF1 | 596 | Aldehyde dehydrogenase 22 | yes | no | 0.998 | 0.874 | 0.848 | 0.0 | |
| P38694 | 644 | Putative aldehyde dehydro | yes | no | 0.957 | 0.776 | 0.398 | 1e-105 | |
| Q9P7K9 | 522 | Putative aldehyde dehydro | yes | no | 0.932 | 0.932 | 0.365 | 1e-97 | |
| P94428 | 462 | Succinate-semialdehyde de | yes | no | 0.831 | 0.939 | 0.299 | 3e-57 | |
| P17202 | 497 | Betaine aldehyde dehydrog | N/A | no | 0.850 | 0.893 | 0.315 | 7e-56 | |
| Q9S795 | 501 | Betaine aldehyde dehydrog | no | no | 0.842 | 0.878 | 0.332 | 7e-55 | |
| A4XPI6 | 490 | Betaine aldehyde dehydrog | no | no | 0.816 | 0.869 | 0.324 | 8e-55 | |
| B0V944 | 490 | Betaine aldehyde dehydrog | no | no | 0.821 | 0.875 | 0.315 | 1e-54 | |
| B7I896 | 490 | Betaine aldehyde dehydrog | no | no | 0.821 | 0.875 | 0.315 | 1e-54 | |
| B7GYG4 | 490 | Betaine aldehyde dehydrog | no | no | 0.821 | 0.875 | 0.315 | 1e-54 |
| >sp|Q0WSF1|AL221_ARATH Aldehyde dehydrogenase 22A1 OS=Arabidopsis thaliana GN=ALDH22A1 PE=2 SV=2 | Back alignment and function desciption |
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Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/521 (84%), Positives = 485/521 (93%)
Query: 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISS 60
MKYLGYFPALS EV+ERV +RKAQK WA+SSFK RRQFLRILLKYIIEHQELICE+SS
Sbjct: 74 MKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKYIIEHQELICEVSS 133
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
RDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK ++VEFHPLGV+G
Sbjct: 134 RDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHKVSRVEFHPLGVIG 193
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQAALAAVGAPENLVD
Sbjct: 194 AIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQAALAAVGAPENLVD 253
Query: 181 VITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
VITGFAETGEALVSSVDK+IFVGS VG+MIMRNA++TLTPVTLELGGKDAFI+C+D DV
Sbjct: 254 VITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELGGKDAFIICEDADV 313
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
HVAQ+AVR LQSSGQNCAGAERFYVH+DIY F+ QV KIVKSVSAGPPL G+YDMGA
Sbjct: 314 SHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVSAGPPLTGRYDMGA 373
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
+CL EHSE LQ+LVNDALDKGAEI RGSFGHL E AVDQYFPPTV++NVNH MK+M+EE
Sbjct: 374 ICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVLINVNHNMKIMKEE 433
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
AFGPIMPIM+F+TDEEV+KLANDSRY LGCAVFSGS+HRA++IA+QIQCGVAAINDFASN
Sbjct: 434 AFGPIMPIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQIQCGVAAINDFASN 493
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGF 480
YMCQSLPFGGVKDSGFGRFAG+EGLRACCLVKSVVEDR+WP IKTKIPKPIQYPVAEN F
Sbjct: 494 YMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRFWPLIKTKIPKPIQYPVAENAF 553
Query: 481 EFQESLVEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRRN 521
EFQE+LVE LYGLNIWDRLR+L++VLK LT+Q++ VS R
Sbjct: 554 EFQEALVETLYGLNIWDRLRSLIDVLKFLTDQSSNVSRTRK 594
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Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|P38694|MSC7_YEAST Putative aldehyde dehydrogenase-like protein YHR039C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MSC7 PE=1 SV=1 | Back alignment and function description |
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Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/527 (39%), Positives = 308/527 (58%), Gaps = 27/527 (5%)
Query: 2 KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
+YLG FP+ + A++DE V++A KAQ W S F +R + L L YI+ +Q+LI ++ R
Sbjct: 121 QYLGSFPSKTEADIDEMVSKAGKAQSTWGNSDFSRRLRVLASLHDYILNNQDLIARVACR 180
Query: 62 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI---HKKAKVEFHPLGV 118
D+GKTM+DAS+GEI+ T EKI W + G++ L+P R + +K A++ + PLGV
Sbjct: 181 DSGKTMLDASMGEILVTLEKIQWTIKHGQRALQPSRRPGPTNFFMKWYKGAEIRYEPLGV 240
Query: 119 VGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENL 178
+ +IVSWNYPFHN+ P++AA+F+GN IV+K SE WS F+ +I+ L A +L
Sbjct: 241 ISSIVSWNYPFHNLLGPIIAALFTGNAIVVKCSEQVVWSSEFFVELIRKCLEACDEDPDL 300
Query: 179 VDVI-----TGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 231
V + T ++ S I F+GS V I++ A+K+LTPV +ELGGKDA
Sbjct: 301 VQLCYCLPPTENDDSANYFTSHPGFKHITFIGSQPVAHYILKCAAKSLTPVVVELGGKDA 360
Query: 232 FIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSAG 289
FIV D ++ ++ I +R QSSGQNC G ER V ++ Y + KI+ ++A
Sbjct: 361 FIVLDSAKNLDALSSIIMRGTFQSSGQNCIGIERVIVSKENY----DDLVKILNDRMTAN 416
Query: 290 PPLAG-------KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 342
P G DMGA+ ++L+ LV DA+ KGA +L GS + YF
Sbjct: 417 PLRQGSDIDHLENVDMGAMISDNRFDELEALVKDAVAKGARLLQGGSRFKHPKYPQGHYF 476
Query: 343 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 402
PT++V+V MK+ Q E FGPI+ +MK + V+LAN + +GLG +VF
Sbjct: 477 QPTLLVDVTPEMKIAQNEVFGPILVMMKAKNTDHCVQLANSAPFGLGGSVFGADIKECNY 536
Query: 403 IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPY 462
+A +Q G AINDFA+ Y+CQ LPFGG+ SG+G+F G EGL C KSV D P+
Sbjct: 537 VANSLQTGNVAINDFATFYVCQ-LPFGGINGSGYGKFGGEEGLLGLCNAKSVCFDT-LPF 594
Query: 463 IKTKIPKPIQYPVAEN--GFEFQESLVEALYGLNIWDRLRALVNVLK 507
+ T+IPKP+ YP+ N + F +S + Y + W R+++L ++ K
Sbjct: 595 VSTQIPKPLDYPIRNNAKAWNFVKSFIVGAYTNSTWQRIKSLFSLAK 641
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Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: - |
| >sp|Q9P7K9|YOSF_SCHPO Putative aldehyde dehydrogenase-like protein C21C3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC21C3.15c PE=3 SV=1 | Back alignment and function description |
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Score = 357 bits (917), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 180/493 (36%), Positives = 289/493 (58%), Gaps = 6/493 (1%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
LG +++++D+ + A +AQK W +SF +RR FL+ L + II +Q+ EI+ +DT
Sbjct: 16 LGEVKLFNKSDIDQSIILAEEAQKEWKSTSFAERRNFLKALKENIIRNQDKYAEIACKDT 75
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 123
GKT+VDA+ GEI+ T EKI W L+ GE+ L+P R + +K V++ PLGV+ A+V
Sbjct: 76 GKTLVDAAFGEILVTLEKINWTLANGEQSLRPTKRPNSLLTSYKGGYVKYEPLGVIAALV 135
Query: 124 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 183
SWNYP HN P+++A+F+GN IV+K SE +WS Y ++++ L ++G LV IT
Sbjct: 136 SWNYPLHNALGPIISALFAGNAIVVKGSELTAWSTHQYCEMVRSLLQSMGHSPELVQCIT 195
Query: 184 GFAETGEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVP 241
+ + L S + I F+GS + +++ +A+K LTP+ LELGGKD I+ DD +
Sbjct: 196 CLPDVADHLTSHSGIKHITFIGSQPIAKLVAASAAKQLTPLCLELGGKDPCILTDDHRLE 255
Query: 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 301
+ I +R QS+GQNC G ER +Y ++++ + ++ G DMGA+
Sbjct: 256 EILSIVMRGVFQSAGQNCIGIERIIALDGVYDTIITKLYNRISTMRLGMYTQNDVDMGAM 315
Query: 302 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 361
+ L++L+ DA+ KGA ++ G + YF PT++V+ + MK+ QEE
Sbjct: 316 VSNNRFDHLESLIQDAVSKGARLVYGGHRFQHPKYPKGNYFLPTLLVDATNEMKIAQEEC 375
Query: 362 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 421
F PI + + + E +++AN + +GLG +VF + + ++ G+ A+NDF + Y
Sbjct: 376 FAPIALVFRAKSPEHALEIANGTEFGLGASVFGRDKQLCQYFTDNLETGMVAVNDFGAFY 435
Query: 422 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPV--AENG 479
+ Q +PFGG K SG+GRFAG EGLR C K++ DR + I T IP + YP+ ++
Sbjct: 436 LLQ-MPFGGCKKSGYGRFAGYEGLRGICNSKAIAYDR-FSAIHTGIPPAVDYPIPDSQKA 493
Query: 480 FEFQESLVEALYG 492
++F L+ +YG
Sbjct: 494 WQFVRGLMGTVYG 506
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: - |
| >sp|P94428|GABD_BACSU Succinate-semialdehyde dehydrogenase [NADP(+)] OS=Bacillus subtilis (strain 168) GN=gabD PE=1 SV=1 | Back alignment and function description |
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Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 139/464 (29%), Positives = 242/464 (52%), Gaps = 30/464 (6%)
Query: 7 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKT 66
P S EV+E + ++ +A K W+K+S +R L+ + I+EH+E + ++ +++ GK
Sbjct: 19 IPQQSATEVEEAIERSHQAFKTWSKTSANERTSLLKKWYELIVEHKEELADLITKENGKP 78
Query: 67 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 126
+A +GE++ I W E ++ R+ K+ V P+G V AI WN
Sbjct: 79 YQEA-VGEVLYGAGYIEWFAEEAKRVYG---RTVPAPTTGKRIVVTRQPVGPVAAITPWN 134
Query: 127 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 186
+P I A+ +G +IK + + S R+ A G P++++ V+ G
Sbjct: 135 FPNAMITRKAAPALAAGCTFIIKPAPDTPLSAYELARLAYEA----GIPKDVLQVVIGDG 190
Query: 187 ET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHV 243
E G SS + KI F GS VG+++M+N++ T+ V++ELGG IV +D D+
Sbjct: 191 EEIGNVFTSSPKIRKITFTGSTPVGKILMKNSADTVKHVSMELGGHAPLIVDEDADIDLA 250
Query: 244 AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 303
+ A+ + +++GQ C A R VH I F +++++ V + G L ++G +
Sbjct: 251 VEQAMASKYRNAGQTCVCANRLIVHESIKDEFAAKLSEQVSKLKVGNGLEEGVNVGPIIN 310
Query: 304 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAF 362
EK+ + ++DA++KGA+++A G++ + YF PTV+ +V+ +M +M EE F
Sbjct: 311 KRGFEKIVSQIDDAVEKGAKVIAGGTYDRNDDKGC--YFVNPTVLTDVDTSMNIMHEETF 368
Query: 363 GPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 422
GP+ PI+ F+ +E ++LAND+ YGL F+ + R I+ ++ G+ ND + +
Sbjct: 369 GPVAPIVTFSDIDEAIQLANDTPYGLAAYFFTENYRRGIYISENLEYGIIGWNDGGPSAV 428
Query: 423 CQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTK 466
PFGG+K+SG GR G EG+ PY++TK
Sbjct: 429 --QAPFGGMKESGIGREGGSEGIE--------------PYLETK 456
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Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate. Bacillus subtilis (strain 168) (taxid: 224308) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 9 |
| >sp|P17202|BADH_SPIOL Betaine aldehyde dehydrogenase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 | Back alignment and function description |
|---|
Score = 218 bits (556), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 145/460 (31%), Positives = 231/460 (50%), Gaps = 16/460 (3%)
Query: 4 LGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
+G PA + +V+ V AR+A + W+ +S R +LR + I E ++ ++ +
Sbjct: 36 IGDIPAATAEDVEVAVVAARRAFRRNNWSATSGAHRATYLRAIAAKITEKKDHFVKLETI 95
Query: 62 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGA 121
D+GK +A L +I + + E + M K+ V PLGVVG
Sbjct: 96 DSGKPFDEAVL-DIDDVASCFEYFAGQAEALDGKQKAPVTLPMERFKSHVLRQPLGVVGL 154
Query: 122 IVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 181
I WNYP + A+ +G V+K SE AS + C F + VG P ++++
Sbjct: 155 ISPWNYPLLMATWKIAPALAAGCTAVLKPSELASVT-CLEFGEV---CNEVGLPPGVLNI 210
Query: 182 ITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238
+TG + G LVS VDKI F GS G +M +A++ + PVTLELGGK +V +DV
Sbjct: 211 LTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASAAQLVKPVTLELGGKSPIVVFEDV 270
Query: 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 298
D+ V + + ++GQ C+ R VH I A FV ++ K K++ P +
Sbjct: 271 DIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAEFVDKLVKWTKNIKISDPFEEGCRL 330
Query: 299 GALCLLEHSEKLQNLVNDALDKGAEILARGSFG-HLSEGAVDQYFPPTVIVNVNHTMKLM 357
G + +K+ ++ A +GA IL GS HL +G Y PT++ +++ +M++
Sbjct: 331 GPVISKGQYDKIMKFISTAKSEGATILYGGSRPEHLKKG---YYIEPTIVTDISTSMQIW 387
Query: 358 QEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 417
+EE FGP++ + F++++E + LAND+ YGL AVFS R I ++ G +N
Sbjct: 388 KEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSNDLERCERITKALEVGAVWVN-- 445
Query: 418 ASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457
S P+GG+K SGFGR G G++ +K V +D
Sbjct: 446 CSQPCFVQAPWGGIKRSGFGRELGEWGIQNYLNIKQVTQD 485
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Spinacia oleracea (taxid: 3562) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|Q9S795|BADH1_ARATH Betaine aldehyde dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=ALDH10A8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 215 bits (548), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 154/463 (33%), Positives = 235/463 (50%), Gaps = 23/463 (4%)
Query: 4 LGYFPALSRAEVDERVAQARKA-----QKVWAKSSFKQRRQFLRILLKYIIEHQELICEI 58
+G PA + +VD V AR+A K WAK+ R ++LR + + E + + ++
Sbjct: 36 IGDIPAATTEDVDVAVNAARRALSRNKGKDWAKAPGAVRAKYLRAIAAKVNERKTDLAKL 95
Query: 59 SSRDTGKTMVDASLG-EIMTTCEKITWLLSEGEKWLKPEYRSS-GRSMIHKKAKVEFHPL 116
+ D GK + +A + + C + L+EG L + ++ M K+ V PL
Sbjct: 96 EALDCGKPLDEAVWDMDDVAGCFEFYADLAEG---LDAKQKAPVSLPMESFKSYVLKQPL 152
Query: 117 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 176
GVVG I WNYP + ++ +G ++K SE AS + C I VG P
Sbjct: 153 GVVGLITPWNYPLLMAVWKVAPSLAAGCTAILKPSELASVT-CLELADI---CREVGLPP 208
Query: 177 NLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 233
+++V+TGF +E G L S VDKI F GS G +M A++ + PV++ELGGK I
Sbjct: 209 GVLNVLTGFGSEAGAPLASHPGVDKIAFTGSFATGSKVMTAAAQLVKPVSMELGGKSPLI 268
Query: 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 293
V DDVD+ A+ A+ ++GQ C+ R VH I + F+ ++ K K++ P+
Sbjct: 269 VFDDVDLDKAAEWALFGCFWTNGQICSATSRLLVHESIASEFIEKLVKWSKNIKISDPME 328
Query: 294 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG-HLSEGAVDQYFPPTVIVNVNH 352
+G + EK+ ++ A +GA IL GS HL +G + PT+I +V
Sbjct: 329 EGCRLGPVVSKGQYEKILKFISTAKSEGATILHGGSRPEHLEKGF---FIEPTIITDVTT 385
Query: 353 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 412
+M++ +EE FGP++ + F +++E ++LANDS YGLG AV S R I+ + G+
Sbjct: 386 SMQIWREEVFGPVLCVKTFASEDEAIELANDSHYGLGAAVISNDTERCDRISEAFEAGIV 445
Query: 413 AINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
IN S P+GGVK SGFGR G GL VK V
Sbjct: 446 WIN--CSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVT 486
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Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|A4XPI6|BETB_PSEMY Betaine aldehyde dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 215 bits (547), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 148/456 (32%), Positives = 229/456 (50%), Gaps = 30/456 (6%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
S+A+VD VA A + QKVWA + QR + LR + + E + + E+ + DTGK + +
Sbjct: 42 SQADVDRAVASAAEGQKVWAAMTAMQRSRILRRAVDILRERNDELAELETLDTGKPLSET 101
Query: 71 SLGEIMTTCEKITWLLS-----EGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSW 125
+I+T + + + EGE+ E S ++ + + PLGVV I +W
Sbjct: 102 RYVDIVTGADVLEYYAGLIPAIEGEQIPLRE-----SSFVYTRRE----PLGVVAGIGAW 152
Query: 126 NYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 185
NYP A+ +GN ++ K SE S + I A G P + +V+TG
Sbjct: 153 NYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAEIYTEA----GLPAGVFNVLTGS 208
Query: 186 A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVP 241
E G+ L ++K+ F G G+ +M +AS + L VT+ELGGK IV +D D+
Sbjct: 209 GREVGQWLTEHPGIEKVSFTGGTVTGKKVMASASSSSLKEVTMELGGKSPLIVFEDADLD 268
Query: 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 301
A IAV A SSGQ C R +V R + A F ++V + VK + G PL + G L
Sbjct: 269 RAADIAVMANFYSSGQVCTNGTRVFVPRMLQARFEAKVLERVKRIRLGDPLDDATNFGPL 328
Query: 302 CLLEHSEKLQNLVNDALDKGAEIL---ARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ 358
H E + + +GA +L R S G ++GA Y PTV + M +++
Sbjct: 329 VSYAHMESVLGYIEKGRSEGARLLIGGTRVSDGDYAKGA---YVAPTVFTDCRDDMTIVR 385
Query: 359 EEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFA 418
EE FGP+M I+ ++++EEV++ AND+ YGL V + +RA + +++ G+ IN +
Sbjct: 386 EEIFGPVMSILIYDSEEEVIRRANDTDYGLAAGVVTRDLNRAHRVIHKLEAGICWINTWG 445
Query: 419 SNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
+ +P GG K SG GR G+ L +KSV
Sbjct: 446 ES--PAEMPVGGYKQSGVGRENGLVTLGHYTRIKSV 479
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Pseudomonas mendocina (strain ymp) (taxid: 399739) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|B0V944|BETB_ACIBY Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=betB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 143/453 (31%), Positives = 226/453 (49%), Gaps = 24/453 (5%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
S +++ V A++ QK+WA + +R + LR + + E + + + + DTGK +
Sbjct: 42 SEQDIEAAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSET 101
Query: 71 SLGEIMTTCEKITWL--LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 128
S +I+T + + + L+ + + R S S + + + PLGVV I +WNYP
Sbjct: 102 STVDIVTGADVLEYYAGLATAIQGEQVPLRES--SFFYTRRE----PLGVVAGIGAWNYP 155
Query: 129 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-E 187
A+ +GN ++ K SE + I A G P+ + +V+ G E
Sbjct: 156 IQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEA----GLPDGVFNVVQGAGRE 211
Query: 188 TGEALVSS--VDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVA 244
G+ L ++KI F G G+ +M +A+ TL VT+ELGGK I+C+D D+ A
Sbjct: 212 IGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAA 271
Query: 245 QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 304
IAV A SSGQ C R +V + A F V + VK + G P+A + G L
Sbjct: 272 DIAVMANFFSSGQVCTNGTRVFVPKSRLADFEKAVVERVKRIRVGDPMAEDTNFGPLTSF 331
Query: 305 EHSEKLQNLVNDALDKGAEIL---ARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 361
H EK+ + + +GA++L R + G L++GA Y PTV + M ++QEE
Sbjct: 332 PHMEKVLSFIESGKQQGAKVLIGGGRATEGELAKGA---YVLPTVFSDCTDQMAIVQEEI 388
Query: 362 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 421
FGP+M I+ + T+EEV++ AND+ +GL V + RA I QI+ G+ IN + +
Sbjct: 389 FGPVMSILSYETEEEVIQRANDTTFGLAAGVVTQDISRAHRIIHQIEAGICWINTWGES- 447
Query: 422 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
+P GG K SG GR G+ L +KS+
Sbjct: 448 -PAEMPVGGYKQSGVGRENGLTTLGHYTRIKSI 479
|
Acinetobacter baumannii (strain AYE) (taxid: 509173) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|B7I896|BETB_ACIB5 Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB0057) GN=betB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 143/453 (31%), Positives = 226/453 (49%), Gaps = 24/453 (5%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
S +++ V A++ QK+WA + +R + LR + + E + + + + DTGK +
Sbjct: 42 SEQDIEAAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSET 101
Query: 71 SLGEIMTTCEKITWL--LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 128
S +I+T + + + L+ + + R S S + + + PLGVV I +WNYP
Sbjct: 102 STVDIVTGADVLEYYAGLATAIQGEQVPLRES--SFFYTRRE----PLGVVAGIGAWNYP 155
Query: 129 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-E 187
A+ +GN ++ K SE + I A G P+ + +V+ G E
Sbjct: 156 IQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEA----GLPDGVFNVVQGAGRE 211
Query: 188 TGEALVSS--VDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVA 244
G+ L ++KI F G G+ +M +A+ TL VT+ELGGK I+C+D D+ A
Sbjct: 212 IGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAA 271
Query: 245 QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 304
IAV A SSGQ C R +V + A F V + VK + G P+A + G L
Sbjct: 272 DIAVMANFFSSGQVCTNGTRVFVPKSRLADFEKAVVERVKRIRVGDPMAEDTNFGPLTSF 331
Query: 305 EHSEKLQNLVNDALDKGAEIL---ARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 361
H EK+ + + +GA++L R + G L++GA Y PTV + M ++QEE
Sbjct: 332 PHMEKVLSFIESGKQQGAKVLIGGGRATEGELAKGA---YVLPTVFSDCTDQMAIVQEEI 388
Query: 362 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 421
FGP+M I+ + T+EEV++ AND+ +GL V + RA I QI+ G+ IN + +
Sbjct: 389 FGPVMSILSYETEEEVIQRANDTTFGLAAGVVTQDISRAHRIIHQIEAGICWINTWGES- 447
Query: 422 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
+P GG K SG GR G+ L +KS+
Sbjct: 448 -PAEMPVGGYKQSGVGRENGLTTLGHYTRIKSI 479
|
Acinetobacter baumannii (strain AB0057) (taxid: 480119) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|B7GYG4|BETB_ACIB3 Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB307-0294) GN=betB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 143/453 (31%), Positives = 226/453 (49%), Gaps = 24/453 (5%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
S +++ V A++ QK+WA + +R + LR + + E + + + + DTGK +
Sbjct: 42 SEQDIEAAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSET 101
Query: 71 SLGEIMTTCEKITWL--LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 128
S +I+T + + + L+ + + R S S + + + PLGVV I +WNYP
Sbjct: 102 STVDIVTGADVLEYYAGLATAIQGEQVPLRES--SFFYTRRE----PLGVVAGIGAWNYP 155
Query: 129 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-E 187
A+ +GN ++ K SE + I A G P+ + +V+ G E
Sbjct: 156 IQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEA----GLPDGVFNVVQGAGRE 211
Query: 188 TGEALVSS--VDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVA 244
G+ L ++KI F G G+ +M +A+ TL VT+ELGGK I+C+D D+ A
Sbjct: 212 IGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAA 271
Query: 245 QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 304
IAV A SSGQ C R +V + A F V + VK + G P+A + G L
Sbjct: 272 DIAVMANFFSSGQVCTNGTRVFVPKSRLADFEKAVVERVKRIRVGDPMAEDTNFGPLTSF 331
Query: 305 EHSEKLQNLVNDALDKGAEIL---ARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 361
H EK+ + + +GA++L R + G L++GA Y PTV + M ++QEE
Sbjct: 332 PHMEKVLSFIESGKQQGAKVLIGGGRATEGELAKGA---YVLPTVFSDCTDQMAIVQEEI 388
Query: 362 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 421
FGP+M I+ + T+EEV++ AND+ +GL V + RA I QI+ G+ IN + +
Sbjct: 389 FGPVMSILSYETEEEVIQRANDTTFGLAAGVVTQDISRAHRIIHQIEAGICWINTWGES- 447
Query: 422 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
+P GG K SG GR G+ L +KS+
Sbjct: 448 -PAEMPVGGYKQSGVGRENGLTTLGHYTRIKSI 479
|
Acinetobacter baumannii (strain AB307-0294) (taxid: 557600) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 522 | ||||||
| 255556370 | 593 | aldehyde dehydrogenase, putative [Ricinu | 0.998 | 0.878 | 0.892 | 0.0 | |
| 225431946 | 593 | PREDICTED: aldehyde dehydrogenase 22A1 [ | 1.0 | 0.880 | 0.874 | 0.0 | |
| 224101571 | 594 | predicted protein [Populus trichocarpa] | 1.0 | 0.878 | 0.871 | 0.0 | |
| 356521770 | 597 | PREDICTED: aldehyde dehydrogenase 22A1-l | 1.0 | 0.874 | 0.856 | 0.0 | |
| 218200296 | 611 | hypothetical protein OsI_27412 [Oryza sa | 0.996 | 0.851 | 0.844 | 0.0 | |
| 42572293 | 596 | aldehyde dehydrogenase 22A1 [Arabidopsis | 0.998 | 0.874 | 0.848 | 0.0 | |
| 115474211 | 597 | Os07g0688800 [Oryza sativa Japonica Grou | 0.996 | 0.871 | 0.844 | 0.0 | |
| 110735945 | 596 | betaine aldehyde dehydrogenase like prot | 0.998 | 0.874 | 0.848 | 0.0 | |
| 356564784 | 596 | PREDICTED: aldehyde dehydrogenase 22A1-l | 1.0 | 0.875 | 0.854 | 0.0 | |
| 357448941 | 595 | Aldehyde dehydrogenase 22A1 [Medicago tr | 0.996 | 0.873 | 0.853 | 0.0 |
| >gi|255556370|ref|XP_002519219.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223541534|gb|EEF43083.1| aldehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 989 bits (2558), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/522 (89%), Positives = 499/522 (95%), Gaps = 1/522 (0%)
Query: 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISS 60
MKYLG+FPALS EV ERV QARKAQ++WAKSSFKQRRQFLRILLKYIIEHQELICE+SS
Sbjct: 73 MKYLGFFPALSPTEVKERVTQARKAQRIWAKSSFKQRRQFLRILLKYIIEHQELICEVSS 132
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
RDTGKTM+DASLGEIMTTCEKITWLLSEGE+WLKPEYRSSGRSM+HKKAKVEFHPLGV+G
Sbjct: 133 RDTGKTMIDASLGEIMTTCEKITWLLSEGEQWLKPEYRSSGRSMLHKKAKVEFHPLGVIG 192
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AIVSWNYPFHNIFNPMLAAVFSGN IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD
Sbjct: 193 AIVSWNYPFHNIFNPMLAAVFSGNSIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 252
Query: 181 VITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
+ITGFAETGEALVSS DK+IFVGSPGVG+MIMRNA+ TL PVTLELGGKDAFIVC+DVDV
Sbjct: 253 IITGFAETGEALVSSADKVIFVGSPGVGKMIMRNAANTLVPVTLELGGKDAFIVCEDVDV 312
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
PHVAQIAVRAALQSSGQNCAGAERFYVH+DIY+ FVS+VAKIVKSVSAGPPL G+YDMGA
Sbjct: 313 PHVAQIAVRAALQSSGQNCAGAERFYVHKDIYSSFVSEVAKIVKSVSAGPPLTGRYDMGA 372
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
+CL EHS+KLQNLVNDA+DKGA I ARGSFGHL EGAVDQYFPPT++VNVNHTMKLM+EE
Sbjct: 373 ICLQEHSDKLQNLVNDAIDKGAVIEARGSFGHLGEGAVDQYFPPTILVNVNHTMKLMREE 432
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
FGPIMPIMKF+TDEE VKLAND RYGLGCAVFSGSQ RA+EIA+QI CGVAAINDFAS
Sbjct: 433 TFGPIMPIMKFSTDEEAVKLANDCRYGLGCAVFSGSQRRAKEIASQIHCGVAAINDFAST 492
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGF 480
YMCQSLPFGGVKDSGFGRFAG+EGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPV+ENGF
Sbjct: 493 YMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVSENGF 552
Query: 481 EFQESLVEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRRND 522
EFQESLVEALYGLNIWDRLRALVNVLK+L+EQN+ ++RND
Sbjct: 553 EFQESLVEALYGLNIWDRLRALVNVLKMLSEQNSS-GNKRND 593
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225431946|ref|XP_002277743.1| PREDICTED: aldehyde dehydrogenase 22A1 [Vitis vinifera] gi|296083253|emb|CBI22889.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 967 bits (2501), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/524 (87%), Positives = 498/524 (95%), Gaps = 2/524 (0%)
Query: 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISS 60
MKYLG+ PAL EV E VAQARKAQK+WA+SSFKQRRQFLRILLKYIIEHQELICEISS
Sbjct: 70 MKYLGFCPALRPDEVREHVAQARKAQKIWARSSFKQRRQFLRILLKYIIEHQELICEISS 129
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
RDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPEYRS+GRSM+HK AKVEFHPLGV+G
Sbjct: 130 RDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPEYRSTGRSMLHKTAKVEFHPLGVIG 189
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AIVSWNYPFHNIFNPMLAAVFSGNG+VIKVSE+ASWSGCFY RIIQAALAAVGAPENLVD
Sbjct: 190 AIVSWNYPFHNIFNPMLAAVFSGNGVVIKVSEHASWSGCFYLRIIQAALAAVGAPENLVD 249
Query: 181 VITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
VITGFAETGEALVSSVDKIIFVGSPGVG+ IMRNAS TL PVTLELGGKDAFIVC+DVDV
Sbjct: 250 VITGFAETGEALVSSVDKIIFVGSPGVGKTIMRNASDTLIPVTLELGGKDAFIVCEDVDV 309
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
PHVAQIAVRAALQSSGQNCAGAERFYVH+DIY+ FV++V +IVKSV+AGPPL+GKYDMGA
Sbjct: 310 PHVAQIAVRAALQSSGQNCAGAERFYVHQDIYSKFVAEVVRIVKSVTAGPPLSGKYDMGA 369
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
+C+ EHSEKLQNLVN+ALDKGAE RGSFG+L E AVDQ+FPPTV+VNVNH+M+LMQEE
Sbjct: 370 ICMQEHSEKLQNLVNEALDKGAEFAGRGSFGNLGEDAVDQFFPPTVLVNVNHSMQLMQEE 429
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
AFGPI+PIMKF++DEEVVKLANDSRYGLGCAVFSGSQ RA+ IA+QI CG+AAINDFAS
Sbjct: 430 AFGPILPIMKFSSDEEVVKLANDSRYGLGCAVFSGSQRRAKAIASQIHCGMAAINDFAST 489
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGF 480
YMCQSLPFGGVKDSGFGRFAG+EGLRACCLVKSVVEDRWWP+IKTKIPKPIQYPVA+NGF
Sbjct: 490 YMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRWWPFIKTKIPKPIQYPVADNGF 549
Query: 481 EFQESLVEALYGLNIWDRLRALVNVLKVLTEQNTPVSS--RRND 522
EFQESLVEALYGLN+WDRLRALV+VLK+LTEQNTP +S R+ND
Sbjct: 550 EFQESLVEALYGLNVWDRLRALVHVLKMLTEQNTPSNSTKRKND 593
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224101571|ref|XP_002312334.1| predicted protein [Populus trichocarpa] gi|222852154|gb|EEE89701.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 958 bits (2476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/522 (87%), Positives = 489/522 (93%)
Query: 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISS 60
MKYLG+FPALS AEV +RVAQARKAQK+WA+SSFKQRRQFLRILLKYIIEHQELICE+SS
Sbjct: 73 MKYLGFFPALSPAEVHDRVAQARKAQKIWAESSFKQRRQFLRILLKYIIEHQELICEVSS 132
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYR SGR+M +KK++VEFHPLGV+G
Sbjct: 133 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRCSGRAMFYKKSRVEFHPLGVIG 192
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AIVSWNYPFHNIFNPMLAAVFSGN IVIKVSENASWSG FYFRIIQAALAAVGAPENLVD
Sbjct: 193 AIVSWNYPFHNIFNPMLAAVFSGNSIVIKVSENASWSGLFYFRIIQAALAAVGAPENLVD 252
Query: 181 VITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
VITGFAETGEALVSSVDKIIFVGSPGVG+MIMRNAS TL PVTLELGGKD FIVC+D DV
Sbjct: 253 VITGFAETGEALVSSVDKIIFVGSPGVGKMIMRNASDTLIPVTLELGGKDPFIVCEDADV 312
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
HVAQIAVRA LQSSGQNCAGAERFYVHRDIY+ FVS+V KIVKSVS GPPLAG+YDMGA
Sbjct: 313 SHVAQIAVRAVLQSSGQNCAGAERFYVHRDIYSSFVSEVTKIVKSVSVGPPLAGRYDMGA 372
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
+CL EHS+KLQ LVNDAL+KGAEI+ RGSFGHL EGAVDQ++PPTV+VNV+HTMKLMQEE
Sbjct: 373 ICLQEHSDKLQILVNDALEKGAEIVVRGSFGHLGEGAVDQFYPPTVLVNVDHTMKLMQEE 432
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
FGP+MPIMKF+TDEE VKLANDSRYGLGCAVFSGSQ RAREIA+QI CGVAA+NDFASN
Sbjct: 433 TFGPVMPIMKFSTDEEAVKLANDSRYGLGCAVFSGSQRRAREIASQIHCGVAAVNDFASN 492
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGF 480
YMCQSLPFGGVK SGFGRFAGVEGLRACCLVKSVVEDR WPYIKTKIPKPIQYPV EN F
Sbjct: 493 YMCQSLPFGGVKHSGFGRFAGVEGLRACCLVKSVVEDRLWPYIKTKIPKPIQYPVGENSF 552
Query: 481 EFQESLVEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRRND 522
EFQ+SLVEALYGLNI D+LRA VNVLK+++EQN+ S RN+
Sbjct: 553 EFQQSLVEALYGLNIRDKLRAGVNVLKIMSEQNSSNSKSRNE 594
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356521770|ref|XP_003529524.1| PREDICTED: aldehyde dehydrogenase 22A1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 949 bits (2454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/524 (85%), Positives = 491/524 (93%), Gaps = 2/524 (0%)
Query: 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISS 60
MKYLGY PAL+ EV +RV++ RKAQK+WAKSSFKQRR FLRILLKYII+HQ LICEISS
Sbjct: 74 MKYLGYVPALTHEEVKDRVSKVRKAQKMWAKSSFKQRRLFLRILLKYIIKHQALICEISS 133
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
RDTGKTMVDASLGEIMTTCEKI WLLSEGE+WLKPEYRSSGRSM+HK+AKVEFHPLGV+G
Sbjct: 134 RDTGKTMVDASLGEIMTTCEKINWLLSEGEQWLKPEYRSSGRSMLHKRAKVEFHPLGVIG 193
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AIVSWNYPFHNIFNPMLAA+FSGNGIVIK+SE+ASWSGCFYFRIIQ+ALAA+GAPE+LV+
Sbjct: 194 AIVSWNYPFHNIFNPMLAAIFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVE 253
Query: 181 VITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
VITGFAETGEALVSSVDK+IFVGSPGVG+MIM NAS TL PVTLELGGKDAFIVC+DVD+
Sbjct: 254 VITGFAETGEALVSSVDKVIFVGSPGVGKMIMNNASNTLIPVTLELGGKDAFIVCEDVDL 313
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
HVAQIAVRA LQSSGQNCAGAERFYVHR+IY+ FVS+V KIVKSV+AGPPL GKYDMGA
Sbjct: 314 DHVAQIAVRAVLQSSGQNCAGAERFYVHREIYSSFVSKVTKIVKSVTAGPPLVGKYDMGA 373
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
LC+ EHSEKL+ LVNDALDKGAEI+ARG+ GH+ E AVDQYFPPTVIVNVNHTM+LMQEE
Sbjct: 374 LCMHEHSEKLEGLVNDALDKGAEIVARGNLGHIGEDAVDQYFPPTVIVNVNHTMRLMQEE 433
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
AFGPIMPIMKF++DEEVV+LANDS+YGLGCAVFSG+Q RAREIA+QI GVAA+NDFAS
Sbjct: 434 AFGPIMPIMKFSSDEEVVRLANDSKYGLGCAVFSGNQSRAREIASQIHAGVAAVNDFAST 493
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGF 480
YMCQSLPFGGVK SGFGRF GVEGLRACCLVK+VVEDRWWP++KTKIPKPIQYPVAENGF
Sbjct: 494 YMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKAVVEDRWWPFVKTKIPKPIQYPVAENGF 553
Query: 481 EFQESLVEALYGLNIWDRLRALVNVLKVLTEQNTPVSS--RRND 522
EFQESLVEALYGL IWDRLRALVNVLK+LTEQN SS RRND
Sbjct: 554 EFQESLVEALYGLGIWDRLRALVNVLKMLTEQNPGGSSNKRRND 597
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|218200296|gb|EEC82723.1| hypothetical protein OsI_27412 [Oryza sativa Indica Group] gi|222637721|gb|EEE67853.1| hypothetical protein OsJ_25656 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/521 (84%), Positives = 491/521 (94%), Gaps = 1/521 (0%)
Query: 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISS 60
MKYLGYFPAL+ EV E VAQARKAQK+WAKSSFKQRRQFLRILLKYI+EHQ+LICEISS
Sbjct: 88 MKYLGYFPALTPDEVKEHVAQARKAQKIWAKSSFKQRRQFLRILLKYILEHQDLICEISS 147
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
RDTGKTMVDASLGEIMTTCEKITWLL EGEKWLKPEYRS GRSM+HKKAKVEF+PLGV+G
Sbjct: 148 RDTGKTMVDASLGEIMTTCEKITWLLDEGEKWLKPEYRSCGRSMLHKKAKVEFYPLGVIG 207
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AIVSWNYPFHN+FNPMLAA+FSGN VIKVSE+ASWSGCFYFRIIQAALAAVGAP+NLV
Sbjct: 208 AIVSWNYPFHNVFNPMLAAIFSGNAAVIKVSEHASWSGCFYFRIIQAALAAVGAPDNLVH 267
Query: 181 VITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
+ITGFAETG+ALVSSVDKIIFVGSPGVGRMIM AS TL PVTLELGGKDAFIVC+DVD+
Sbjct: 268 IITGFAETGQALVSSVDKIIFVGSPGVGRMIMNRASDTLIPVTLELGGKDAFIVCEDVDL 327
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
P V Q+AVRAALQSSGQNCAGAERFYVH+DIY+ FVSQV KI+KS+S GPPL+G+YDMGA
Sbjct: 328 PSVVQVAVRAALQSSGQNCAGAERFYVHKDIYSTFVSQVVKIIKSISVGPPLSGRYDMGA 387
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
+C++EHSEKLQNLVNDA+DKGAEI RGSFGHL E AVDQ+FPPTV+VNVNHTMK+MQEE
Sbjct: 388 ICMIEHSEKLQNLVNDAVDKGAEIAGRGSFGHLGEDAVDQFFPPTVLVNVNHTMKIMQEE 447
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
AFGPI+PIMKFN+DEEVVKLANDS+YGLGCAVFSG+Q RA +IA+Q+ CGVAAINDFAS+
Sbjct: 448 AFGPILPIMKFNSDEEVVKLANDSKYGLGCAVFSGNQKRAIKIASQLHCGVAAINDFASS 507
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGF 480
YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK+VVEDRWWPY+KT IPKPIQYPV+ENGF
Sbjct: 508 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKAVVEDRWWPYVKTMIPKPIQYPVSENGF 567
Query: 481 EFQESLVEALYGLNIWDRLRALVNVLKVLTEQ-NTPVSSRR 520
EFQE LVE LYGL++WDRLR+LVN+LK+++EQ N+P ++R+
Sbjct: 568 EFQELLVETLYGLSVWDRLRSLVNLLKMISEQNNSPANTRK 608
|
Source: Oryza sativa Indica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42572293|ref|NP_974242.1| aldehyde dehydrogenase 22A1 [Arabidopsis thaliana] gi|118595572|sp|Q0WSF1.2|AL221_ARATH RecName: Full=Aldehyde dehydrogenase 22A1; AltName: Full=Novel aldehyde dehydrogenase family 22 member A1; Flags: Precursor gi|42406419|emb|CAE48165.1| putative aldehyde dehydrogenase [Arabidopsis thaliana] gi|332640912|gb|AEE74433.1| aldehyde dehydrogenase 22A1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/521 (84%), Positives = 485/521 (93%)
Query: 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISS 60
MKYLGYFPALS EV+ERV +RKAQK WA+SSFK RRQFLRILLKYIIEHQELICE+SS
Sbjct: 74 MKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKYIIEHQELICEVSS 133
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
RDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK ++VEFHPLGV+G
Sbjct: 134 RDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHKVSRVEFHPLGVIG 193
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQAALAAVGAPENLVD
Sbjct: 194 AIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQAALAAVGAPENLVD 253
Query: 181 VITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
VITGFAETGEALVSSVDK+IFVGS VG+MIMRNA++TLTPVTLELGGKDAFI+C+D DV
Sbjct: 254 VITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELGGKDAFIICEDADV 313
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
HVAQ+AVR LQSSGQNCAGAERFYVH+DIY F+ QV KIVKSVSAGPPL G+YDMGA
Sbjct: 314 SHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVSAGPPLTGRYDMGA 373
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
+CL EHSE LQ+LVNDALDKGAEI RGSFGHL E AVDQYFPPTV++NVNH MK+M+EE
Sbjct: 374 ICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVLINVNHNMKIMKEE 433
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
AFGPIMPIM+F+TDEEV+KLANDSRY LGCAVFSGS+HRA++IA+QIQCGVAAINDFASN
Sbjct: 434 AFGPIMPIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQIQCGVAAINDFASN 493
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGF 480
YMCQSLPFGGVKDSGFGRFAG+EGLRACCLVKSVVEDR+WP IKTKIPKPIQYPVAEN F
Sbjct: 494 YMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRFWPLIKTKIPKPIQYPVAENAF 553
Query: 481 EFQESLVEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRRN 521
EFQE+LVE LYGLNIWDRLR+L++VLK LT+Q++ VS R
Sbjct: 554 EFQEALVETLYGLNIWDRLRSLIDVLKFLTDQSSNVSRTRK 594
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|115474211|ref|NP_001060704.1| Os07g0688800 [Oryza sativa Japonica Group] gi|24059891|dbj|BAC21357.1| betaine aldehyde dehydrogenase-like [Oryza sativa Japonica Group] gi|50509286|dbj|BAD30593.1| betaine aldehyde dehydrogenase-like [Oryza sativa Japonica Group] gi|113612240|dbj|BAF22618.1| Os07g0688800 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/521 (84%), Positives = 491/521 (94%), Gaps = 1/521 (0%)
Query: 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISS 60
MKYLGYFPAL+ EV E VAQARKAQK+WAKSSFKQRRQFLRILLKYI+EHQ+LICEISS
Sbjct: 74 MKYLGYFPALTPDEVKEHVAQARKAQKIWAKSSFKQRRQFLRILLKYILEHQDLICEISS 133
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
RDTGKTMVDASLGEIMTTCEKITWLL EGEKWLKPEYRS GRSM+HKKAKVEF+PLGV+G
Sbjct: 134 RDTGKTMVDASLGEIMTTCEKITWLLDEGEKWLKPEYRSCGRSMLHKKAKVEFYPLGVIG 193
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AIVSWNYPFHN+FNPMLAA+FSGN VIKVSE+ASWSGCFYFRIIQAALAAVGAP+NLV
Sbjct: 194 AIVSWNYPFHNVFNPMLAAIFSGNAAVIKVSEHASWSGCFYFRIIQAALAAVGAPDNLVH 253
Query: 181 VITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
+ITGFAETG+ALVSSVDKIIFVGSPGVGRMIM AS TL PVTLELGGKDAFIVC+DVD+
Sbjct: 254 IITGFAETGQALVSSVDKIIFVGSPGVGRMIMNRASDTLIPVTLELGGKDAFIVCEDVDL 313
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
P V Q+AVRAALQSSGQNCAGAERFYVH+DIY+ FVSQV KI+KS+S GPPL+G+YDMGA
Sbjct: 314 PSVVQVAVRAALQSSGQNCAGAERFYVHKDIYSTFVSQVVKIIKSISVGPPLSGRYDMGA 373
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
+C++EHSEKLQNLVNDA+DKGAEI RGSFGHL E AVDQ+FPPTV+VNVNHTMK+MQEE
Sbjct: 374 ICMIEHSEKLQNLVNDAVDKGAEIAGRGSFGHLGEDAVDQFFPPTVLVNVNHTMKIMQEE 433
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
AFGPI+PIMKFN+DEEVVKLANDS+YGLGCAVFSG+Q RA +IA+Q+ CGVAAINDFAS+
Sbjct: 434 AFGPILPIMKFNSDEEVVKLANDSKYGLGCAVFSGNQKRAIKIASQLHCGVAAINDFASS 493
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGF 480
YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK+VVEDRWWPY+KT IPKPIQYPV+ENGF
Sbjct: 494 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKAVVEDRWWPYVKTMIPKPIQYPVSENGF 553
Query: 481 EFQESLVEALYGLNIWDRLRALVNVLKVLTEQ-NTPVSSRR 520
EFQE LVE LYGL++WDRLR+LVN+LK+++EQ N+P ++R+
Sbjct: 554 EFQELLVETLYGLSVWDRLRSLVNLLKMISEQNNSPANTRK 594
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|110735945|dbj|BAE99947.1| betaine aldehyde dehydrogenase like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 946 bits (2446), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/521 (84%), Positives = 485/521 (93%)
Query: 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISS 60
MKYLGYFPALS EV+ERV +RKAQK WA+SSFK RRQFLRILLKYIIEHQELICE+SS
Sbjct: 74 MKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKYIIEHQELICEVSS 133
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
RDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK ++VEFHPLGV+G
Sbjct: 134 RDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHKVSRVEFHPLGVIG 193
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQAALAAVGAPENLVD
Sbjct: 194 AIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQAALAAVGAPENLVD 253
Query: 181 VITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
VITGFAETGEALVSSVDK+IFVGS VG+MIMRNA++TLTPVTLELGGKDAFI+C+D DV
Sbjct: 254 VITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELGGKDAFIICEDADV 313
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
HVAQ+AVR LQSSGQNCAGAERFYVH+DIY F+ QV KIVKSVSAGPPL G+YDMGA
Sbjct: 314 SHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVSAGPPLTGRYDMGA 373
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
+CL EHSE LQ+LVNDALDKGAEI RGSFGHL E AVDQYFPPTV++NVNH MK+M+EE
Sbjct: 374 ICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVLINVNHNMKIMKEE 433
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
AFGPIMPIM+F+TDEEV+KLANDSRY LGCAVFSGS+HRA++IA+QIQCGVAAINDFASN
Sbjct: 434 AFGPIMPIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQIQCGVAAINDFASN 493
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGF 480
YMCQSLPFGGVKDSGFGRFAG+EGLRACCLVKSVVEDR+WP IKTKIPKPIQYPVAEN F
Sbjct: 494 YMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRFWPLIKTKIPKPIQYPVAENAF 553
Query: 481 EFQESLVEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRRN 521
EFQE+LVE LYGLNIWDRLR+L++VLK LT+Q++ VS R
Sbjct: 554 EFQEALVETLYGLNIWDRLRSLIDVLKFLTDQSSNVSRTRK 594
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356564784|ref|XP_003550628.1| PREDICTED: aldehyde dehydrogenase 22A1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 946 bits (2444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/523 (85%), Positives = 490/523 (93%), Gaps = 1/523 (0%)
Query: 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISS 60
MKYLGY PAL+R EV +RVA+ RKAQK+WAKSSFKQRR FLRILLKYII+HQ LICEISS
Sbjct: 74 MKYLGYVPALTRDEVKDRVAKVRKAQKMWAKSSFKQRRLFLRILLKYIIKHQALICEISS 133
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
RDTGKTMVDASLGEIMTTCEKI WLLSEGE+WLKPEYRSSGRSM+HK+AKVEFHPLGV+G
Sbjct: 134 RDTGKTMVDASLGEIMTTCEKINWLLSEGEQWLKPEYRSSGRSMLHKRAKVEFHPLGVIG 193
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AIVSWNYPFHNIFNPMLAA+FSGNGIVIK+SE+ASWSGCFYFRIIQ+ALAA+GAPE+LV+
Sbjct: 194 AIVSWNYPFHNIFNPMLAAIFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVE 253
Query: 181 VITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
VITGFAETGEALVSSVDK+IFVGSPGVG+MIM NA+ TLTPVTLELGGKDAFIVC+DVD+
Sbjct: 254 VITGFAETGEALVSSVDKVIFVGSPGVGKMIMNNAANTLTPVTLELGGKDAFIVCEDVDL 313
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
HVAQIAVRA LQSSGQNCAGAERFYVHR+IY+ FVS V KIVKSV+AGPPL GKYDMGA
Sbjct: 314 DHVAQIAVRAVLQSSGQNCAGAERFYVHREIYSSFVSLVTKIVKSVTAGPPLVGKYDMGA 373
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
LC+ EHSEKL+ LVNDALDKGAEI+ARGSFGH+ E AVDQYFPPTVIVNVNHTM+LMQEE
Sbjct: 374 LCMHEHSEKLEGLVNDALDKGAEIVARGSFGHIGEDAVDQYFPPTVIVNVNHTMRLMQEE 433
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
AFGPIMPIMKF++DEEVV+LAN+S+YGLGCAVFSG+Q RAREIA+QI GVAA+NDFAS
Sbjct: 434 AFGPIMPIMKFSSDEEVVRLANESKYGLGCAVFSGNQSRAREIASQIHAGVAAVNDFAST 493
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGF 480
YMCQSLPFGGVK SGFGRF GVEGLRACCLVK+V EDRWWP++KTKIPKPIQYPVAENGF
Sbjct: 494 YMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKAVAEDRWWPFVKTKIPKPIQYPVAENGF 553
Query: 481 EFQESLVEALYGLNIWDRLRALVNVLKVLTEQNT-PVSSRRND 522
EFQESLVEALYG+ IWDRLRALVNVLK+LTEQ+ RRND
Sbjct: 554 EFQESLVEALYGIGIWDRLRALVNVLKMLTEQHPGGGGKRRND 596
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357448941|ref|XP_003594746.1| Aldehyde dehydrogenase 22A1 [Medicago truncatula] gi|124359955|gb|ABN07971.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355483794|gb|AES64997.1| Aldehyde dehydrogenase 22A1 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/520 (85%), Positives = 488/520 (93%)
Query: 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISS 60
MKYLG+ PAL+ EV ER+ + RKAQK+WAK+SFKQRRQFLRILLKYII+HQ LICEISS
Sbjct: 74 MKYLGFLPALAPDEVKERIEKVRKAQKMWAKTSFKQRRQFLRILLKYIIKHQALICEISS 133
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
RDTGKTMVDASLGEIMTTCEKI WLLSEGEK LKPEYRSSGRSM+HK+A+VEFHPLGV+G
Sbjct: 134 RDTGKTMVDASLGEIMTTCEKINWLLSEGEKCLKPEYRSSGRSMLHKRARVEFHPLGVIG 193
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AIVSWNYPFHNIFNPMLAAVFSGNGIVIK+SE+ASWSGCFYFRIIQ+ALAA+GAPE+LV+
Sbjct: 194 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVE 253
Query: 181 VITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
VITGF ETGEALVSSVDK+IFVGSPGVG+MIM+NAS+TL PVTLELGGKDAFIVC+DVDV
Sbjct: 254 VITGFGETGEALVSSVDKVIFVGSPGVGKMIMKNASETLIPVTLELGGKDAFIVCEDVDV 313
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
HVAQIAVRA LQS GQNCAGAERFYVHR+IY FVS+V KI+KSV+AGPPLAGKYDMGA
Sbjct: 314 DHVAQIAVRAVLQSGGQNCAGAERFYVHRNIYPSFVSKVTKIIKSVTAGPPLAGKYDMGA 373
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
LC+ EHSEKL LVNDALDKGAEI+ARGSFGH+ E AVDQYFPPTVIVNVNH+MKLMQEE
Sbjct: 374 LCMHEHSEKLLGLVNDALDKGAEIVARGSFGHIGEDAVDQYFPPTVIVNVNHSMKLMQEE 433
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
AFGPIMPIMKF++DEEV+KLANDS+YGL CAVFSGSQ AREIA+ I CGVAA+NDFASN
Sbjct: 434 AFGPIMPIMKFSSDEEVIKLANDSKYGLSCAVFSGSQSHAREIASHIHCGVAAVNDFASN 493
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGF 480
YMCQSLPFGGVK SGFGRF GVEGLRACCLVKSVVEDRWWP+IKTKIPKPIQYPVAENGF
Sbjct: 494 YMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKSVVEDRWWPFIKTKIPKPIQYPVAENGF 553
Query: 481 EFQESLVEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRR 520
EFQESLVEALYGL+IWDRL+ALVNVLK+LTEQN+ +++
Sbjct: 554 EFQESLVEALYGLSIWDRLQALVNVLKMLTEQNSTGGNKK 593
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 522 | ||||||
| TAIR|locus:2103425 | 596 | ALDH22A1 "AT3G66658" [Arabidop | 0.996 | 0.872 | 0.85 | 4.8e-245 | |
| DICTYBASE|DDB_G0279613 | 589 | DDB_G0279613 "aldehyde dehydro | 0.955 | 0.847 | 0.414 | 9.5e-105 | |
| UNIPROTKB|G5EHY1 | 632 | MGCH7_ch7g516 "Succinate-semia | 0.963 | 0.795 | 0.415 | 5.3e-104 | |
| CGD|CAL0001732 | 614 | orf19.1865 [Candida albicans ( | 0.959 | 0.815 | 0.404 | 1.8e-103 | |
| SGD|S000001081 | 644 | MSC7 "Protein of unknown funct | 0.955 | 0.774 | 0.401 | 7.4e-98 | |
| POMBASE|SPBC21C3.15c | 522 | SPBC21C3.15c "aldehyde dehydro | 0.931 | 0.931 | 0.368 | 2.7e-91 | |
| ASPGD|ASPL0000002032 | 642 | AN6636 [Emericella nidulans (t | 0.549 | 0.447 | 0.411 | 9.3e-59 | |
| UNIPROTKB|P96405 | 487 | MT0233 "PROBABLE ALDEHYDE DEHY | 0.839 | 0.899 | 0.310 | 7.8e-55 | |
| TAIR|locus:2100449 | 503 | ALDH10A9 "AT3G48170" [Arabidop | 0.858 | 0.890 | 0.321 | 2.6e-54 | |
| TAIR|locus:2027186 | 501 | ALDH10A8 "AT1G74920" [Arabidop | 0.852 | 0.888 | 0.331 | 7e-54 |
| TAIR|locus:2103425 ALDH22A1 "AT3G66658" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2361 (836.2 bits), Expect = 4.8e-245, P = 4.8e-245
Identities = 442/520 (85%), Positives = 485/520 (93%)
Query: 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISS 60
MKYLGYFPALS EV+ERV +RKAQK WA+SSFK RRQFLRILLKYIIEHQELICE+SS
Sbjct: 74 MKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKYIIEHQELICEVSS 133
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
RDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK ++VEFHPLGV+G
Sbjct: 134 RDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHKVSRVEFHPLGVIG 193
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQAALAAVGAPENLVD
Sbjct: 194 AIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQAALAAVGAPENLVD 253
Query: 181 VITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
VITGFAETGEALVSSVDK+IFVGS VG+MIMRNA++TLTPVTLELGGKDAFI+C+D DV
Sbjct: 254 VITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELGGKDAFIICEDADV 313
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
HVAQ+AVR LQSSGQNCAGAERFYVH+DIY F+ QV KIVKSVSAGPPL G+YDMGA
Sbjct: 314 SHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVSAGPPLTGRYDMGA 373
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
+CL EHSE LQ+LVNDALDKGAEI RGSFGHL E AVDQYFPPTV++NVNH MK+M+EE
Sbjct: 374 ICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVLINVNHNMKIMKEE 433
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
AFGPIMPIM+F+TDEEV+KLANDSRY LGCAVFSGS+HRA++IA+QIQCGVAAINDFASN
Sbjct: 434 AFGPIMPIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQIQCGVAAINDFASN 493
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGF 480
YMCQSLPFGGVKDSGFGRFAG+EGLRACCLVKSVVEDR+WP IKTKIPKPIQYPVAEN F
Sbjct: 494 YMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRFWPLIKTKIPKPIQYPVAENAF 553
Query: 481 EFQESLVEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRR 520
EFQE+LVE LYGLNIWDRLR+L++VLK LT+Q++ VS R
Sbjct: 554 EFQEALVETLYGLNIWDRLRSLIDVLKFLTDQSSNVSRTR 593
|
|
| DICTYBASE|DDB_G0279613 DDB_G0279613 "aldehyde dehydrogenase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
Identities = 209/504 (41%), Positives = 308/504 (61%)
Query: 2 KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
K +G +L EV + A+KAQ W +++F +RRQ L+ + I+H+ + E S R
Sbjct: 77 KSMGIVNSLKPDEVKTCLEAAQKAQVEWGQTTFDERRQILQDFIDMFIKHENELVEASMR 136
Query: 62 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGA 121
DTGKT +A GEI+T+CEK+ +L+ GEK LK E R M K A++E+HPLGV+G
Sbjct: 137 DTGKTRFEAMFGEILTSCEKLRYLIQNGEKALKTEDRIVPMLMGTKSARLEYHPLGVIGI 196
Query: 122 IVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 181
I+ WNYP H+I + AA+F+GN ++KVSE ++ S + +++ L+ G NL+ +
Sbjct: 197 IIPWNYPIHSIISAAAAAIFAGNAALVKVSEWSTHSKILFEHLLRKVLSNRGYDPNLIQI 256
Query: 182 ITGFAETGEALV-SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
+ G ETGEALV S VDKI+F+GSPG G+ +M+ AS +LTPV LELGGKD IV DDV++
Sbjct: 257 LPGMGETGEALVRSGVDKILFIGSPGTGKRVMKAASDSLTPVILELGGKDPMIVFDDVEL 316
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
I R + GQNC +ER +VH IY F Q+A + S+ GPP G +D G+
Sbjct: 317 DWALAIVQRGCFINLGQNCISSERVFVHEKIYDQFCKQMADKINSLKQGPPEEGHFDFGS 376
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
+ + +K+++LV A+ +GA +LA G YF PTV+ NV M + QEE
Sbjct: 377 MTMPAQVDKVEHLVGTAIKEGATLLAGGKRNPAYPKG--NYFLPTVLANVTENMTIFQEE 434
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
AFGP+ I+KF+ + ++++ AN + +GLGC++ S RA I ++I G+ IND+ ++
Sbjct: 435 AFGPVCSIIKFSDEHDLIRKANGTAFGLGCSILSSDIKRAERIGSKISTGMLTINDYGAS 494
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGF 480
Y+ Q LPFGG K+SGFGRF G EGLR S++ DR+ IKT +P+ I+YP+
Sbjct: 495 YLIQDLPFGGCKESGFGRFNGPEGLRGFSREVSILTDRFG--IKTPVPRLIRYPIDPASV 552
Query: 481 EFQESLVEALYGLNIWDRLRALVN 504
+ +Y I ++LRA +N
Sbjct: 553 GIIRQAIYMIYQRGIVNKLRAALN 576
|
|
| UNIPROTKB|G5EHY1 MGCH7_ch7g516 "Succinate-semialdehyde dehydrogenase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
Identities = 215/517 (41%), Positives = 320/517 (61%)
Query: 2 KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
++LG+ + A +D + QA AQK WA +SF++RR+ LR +L+YI+++QE IC ++
Sbjct: 117 QFLGFVNPATPAAIDRAIEQAATAQKKWALTSFRERRKVLRSMLQYILDNQEEICRVAGM 176
Query: 62 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGA 121
D+GKTMVDA LGEI+ T EK+ W ++ GEK L+PE R + M++K+ V + PLGV+ A
Sbjct: 177 DSGKTMVDAQLGEILVTVEKLQWTIAHGEKALRPERRPTNLLMMYKRNSVHYEPLGVIAA 236
Query: 122 IVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 181
+VSWNYPFHN+ P+++A+F+GNGI++KVSEN +WS ++ I + AL A G +L+
Sbjct: 237 LVSWNYPFHNLLGPIISAIFAGNGILVKVSENTAWSSSYFASIARGALFAHGYDPSLIQT 296
Query: 182 ITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV- 238
+ + + + S + I F+GS V + +A+K LTPV ELGGKDAFIV D
Sbjct: 297 VACWPQVAGHITSHKGISHITFIGSQAVAHKVAESAAKVLTPVCAELGGKDAFIVLDSAA 356
Query: 239 -DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP-PLAGKY 296
D+ + ++ +R QS+GQNC G ER +Y V +A+ V+ + GP PL
Sbjct: 357 KDLNRIVEMMLRGTFQSAGQNCIGIERIIATPAVYDRIVLALAERVRGLRVGPGPLDA-- 414
Query: 297 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 356
D+GA+ ++L++LV DA+ GA +LA G + YF PT++V+V M L
Sbjct: 415 DVGAMVSDASFDRLEHLVADAVRCGARLLAGGKRLIHPQHPSGHYFTPTLVVDVTPDMAL 474
Query: 357 MQEEAFGPIMPIMKF--NTDEEVVKLANDSRYGLGCAVFS-GSQHRAREIAAQIQCGVAA 413
+EE FGPIM +M+ NT + V+ +AN +GLG +VF S +E+ ++ G+ A
Sbjct: 475 AREECFGPIMTLMRAPANTAKAVLDVANAPDFGLGGSVFGRDSDPVLKEVVRGLRTGMVA 534
Query: 414 INDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR-WWPYIKTKIPKPIQ 472
+NDFA+ Y Q LPFGGV SG+GRFAG EGLR KS+ EDR W ++T IP P++
Sbjct: 535 VNDFATYYAVQ-LPFGGVGGSGYGRFAGEEGLRGISNAKSICEDRAGWLGVRTAIPPPMR 593
Query: 473 YPVAEN--GFEFQESLVEALYGLNIWDRLRALVNVLK 507
YPV + + F + +VE YGL + ++R LV + K
Sbjct: 594 YPVRDQDRSWRFAKGVVELGYGLTLGAKVRGLVGLAK 630
|
|
| CGD|CAL0001732 orf19.1865 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 1025 (365.9 bits), Expect = 1.8e-103, P = 1.8e-103
Identities = 210/519 (40%), Positives = 314/519 (60%)
Query: 2 KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
+YLG F +R ++DE + A KAQK WA SSF RR+ L+ + +I+E+QE I ++ R
Sbjct: 94 QYLGVFNCTTREDMDEMINNASKAQKKWANSSFSLRRKLLKTMASFILENQENIARVACR 153
Query: 62 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI---HKKAKVEFHPLGV 118
D+GKT +DAS+GEIM T EK+ W++S GEK L+P R + + K A+V + P+GV
Sbjct: 154 DSGKTKLDASMGEIMVTLEKLNWIISHGEKVLRPSQRPGPANFLIGMMKNAEVRYEPMGV 213
Query: 119 VGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENL 178
V +IVSWNYPFHN+ P++A++F+GN I++K SEN WS ++ + ++ L + ENL
Sbjct: 214 VTSIVSWNYPFHNLMGPVIASLFTGNAIIVKCSENVVWSSQWFIKFVRKCLQELDIDENL 273
Query: 179 VDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236
V + F E VS + I F+GS V ++ A+K LTP +ELGGKDA IV D
Sbjct: 274 VQLCCCFPNDAEYFVSHPGLSHITFIGSKNVAHHVVSQAAKQLTPCVVELGGKDALIVLD 333
Query: 237 DV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL--A 293
DV DV ++ + +R QS+GQNC G ER +Y V + +KS G +
Sbjct: 334 DVKDVQSLSSVILRGTFQSAGQNCIGVERVICLPKVYEQLVEIFTERIKSFRVGSDIDQL 393
Query: 294 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT 353
+ DMGA+ +L+ L+ DA+ KGA ++ G YF PT++V+V+ T
Sbjct: 394 DEIDMGAMISDNRFAQLEGLIEDAVSKGARLIHGGKQYQHPNYPQGHYFEPTLLVDVDPT 453
Query: 354 MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 413
MK+ QEE FGP++ +++ N E+ V +AN + +GLG ++F + ++ +IA Q+Q G A
Sbjct: 454 MKIFQEEVFGPVLTMIRANDAEDAVNIANGTEFGLGNSIFGSNFNQVNQIADQLQSGNVA 513
Query: 414 INDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIK-----TKIP 468
INDFA+ Y+ Q LPFGG+K SG+G+F G EGL C KSV+ D+ P ++ T IP
Sbjct: 514 INDFATFYVAQ-LPFGGIKQSGYGKFGGEEGLTGLCNAKSVIMDK--PLLRLFGVATSIP 570
Query: 469 KPIQYPVAEN--GFEFQESLVEALYGLNIWDRLRALVNV 505
PI YP+ + + F +SL A Y +W++++AL N+
Sbjct: 571 PPIDYPIENDKKAWNFVKSLNIAGYDGRLWNKVKALKNL 609
|
|
| SGD|S000001081 MSC7 "Protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 972 (347.2 bits), Expect = 7.4e-98, P = 7.4e-98
Identities = 212/528 (40%), Positives = 310/528 (58%)
Query: 2 KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
+YLG FP+ + A++DE V++A KAQ W S F +R + L L YI+ +Q+LI ++ R
Sbjct: 121 QYLGSFPSKTEADIDEMVSKAGKAQSTWGNSDFSRRLRVLASLHDYILNNQDLIARVACR 180
Query: 62 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI---HKKAKVEFHPLGV 118
D+GKTM+DAS+GEI+ T EKI W + G++ L+P R + +K A++ + PLGV
Sbjct: 181 DSGKTMLDASMGEILVTLEKIQWTIKHGQRALQPSRRPGPTNFFMKWYKGAEIRYEPLGV 240
Query: 119 VGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENL 178
+ +IVSWNYPFHN+ P++AA+F+GN IV+K SE WS F+ +I+ L A +L
Sbjct: 241 ISSIVSWNYPFHNLLGPIIAALFTGNAIVVKCSEQVVWSSEFFVELIRKCLEACDEDPDL 300
Query: 179 VDVI-----TGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 231
V + T ++ S I F+GS V I++ A+K+LTPV +ELGGKDA
Sbjct: 301 VQLCYCLPPTENDDSANYFTSHPGFKHITFIGSQPVAHYILKCAAKSLTPVVVELGGKDA 360
Query: 232 FIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSAG 289
FIV D ++ ++ I +R QSSGQNC G ER V ++ Y + KI+ ++A
Sbjct: 361 FIVLDSAKNLDALSSIIMRGTFQSSGQNCIGIERVIVSKENY----DDLVKILNDRMTAN 416
Query: 290 PPLAGK-------YDMGALCLLEHSEKLQNLVNDALDKGAEILARGS-FGHLSEGAVDQY 341
P G DMGA+ ++L+ LV DA+ KGA +L GS F H + Y
Sbjct: 417 PLRQGSDIDHLENVDMGAMISDNRFDELEALVKDAVAKGARLLQGGSRFKH-PKYPQGHY 475
Query: 342 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 401
F PT++V+V MK+ Q E FGPI+ +MK + V+LAN + +GLG +VF
Sbjct: 476 FQPTLLVDVTPEMKIAQNEVFGPILVMMKAKNTDHCVQLANSAPFGLGGSVFGADIKECN 535
Query: 402 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWP 461
+A +Q G AINDFA+ Y+CQ LPFGG+ SG+G+F G EGL C KSV D P
Sbjct: 536 YVANSLQTGNVAINDFATFYVCQ-LPFGGINGSGYGKFGGEEGLLGLCNAKSVCFDTL-P 593
Query: 462 YIKTKIPKPIQYPVAENG--FEFQESLVEALYGLNIWDRLRALVNVLK 507
++ T+IPKP+ YP+ N + F +S + Y + W R+++L ++ K
Sbjct: 594 FVSTQIPKPLDYPIRNNAKAWNFVKSFIVGAYTNSTWQRIKSLFSLAK 641
|
|
| POMBASE|SPBC21C3.15c SPBC21C3.15c "aldehyde dehydrogenase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 182/494 (36%), Positives = 291/494 (58%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
LG +++++D+ + A +AQK W +SF +RR FL+ L + II +Q+ EI+ +DT
Sbjct: 16 LGEVKLFNKSDIDQSIILAEEAQKEWKSTSFAERRNFLKALKENIIRNQDKYAEIACKDT 75
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 123
GKT+VDA+ GEI+ T EKI W L+ GE+ L+P R + +K V++ PLGV+ A+V
Sbjct: 76 GKTLVDAAFGEILVTLEKINWTLANGEQSLRPTKRPNSLLTSYKGGYVKYEPLGVIAALV 135
Query: 124 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 183
SWNYP HN P+++A+F+GN IV+K SE +WS Y ++++ L ++G LV IT
Sbjct: 136 SWNYPLHNALGPIISALFAGNAIVVKGSELTAWSTHQYCEMVRSLLQSMGHSPELVQCIT 195
Query: 184 GFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVP 241
+ + L S + I F+GS + +++ +A+K LTP+ LELGGKD I+ DD +
Sbjct: 196 CLPDVADHLTSHSGIKHITFIGSQPIAKLVAASAAKQLTPLCLELGGKDPCILTDDHRLE 255
Query: 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 301
+ I +R QS+GQNC G ER +Y ++++ + ++ G DMGA+
Sbjct: 256 EILSIVMRGVFQSAGQNCIGIERIIALDGVYDTIITKLYNRISTMRLGMYTQNDVDMGAM 315
Query: 302 CLLEHSEKLQNLVNDALDKGAEILARGS-FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
+ L++L+ DA+ KGA ++ G F H + YF PT++V+ + MK+ QEE
Sbjct: 316 VSNNRFDHLESLIQDAVSKGARLVYGGHRFQH-PKYPKGNYFLPTLLVDATNEMKIAQEE 374
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
F PI + + + E +++AN + +GLG +VF + + ++ G+ A+NDF +
Sbjct: 375 CFAPIALVFRAKSPEHALEIANGTEFGLGASVFGRDKQLCQYFTDNLETGMVAVNDFGAF 434
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPV--AEN 478
Y+ Q +PFGG K SG+GRFAG EGLR C K++ DR+ I T IP + YP+ ++
Sbjct: 435 YLLQ-MPFGGCKKSGYGRFAGYEGLRGICNSKAIAYDRF-SAIHTGIPPAVDYPIPDSQK 492
Query: 479 GFEFQESLVEALYG 492
++F L+ +YG
Sbjct: 493 AWQFVRGLMGTVYG 506
|
|
| ASPGD|ASPL0000002032 AN6636 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 121/294 (41%), Positives = 178/294 (60%)
Query: 5 GYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG 64
G PA + +VD + A +AQ+ WA ++F +RR+ L+ LLKY++EHQ+ I D+G
Sbjct: 114 GIKPATAD-DVDRAIQAASRAQEQWATTTFAERRRVLKTLLKYVLEHQDEIVIACCLDSG 172
Query: 65 KTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 124
KT VDA+ GE + T EK+ W + GE+ L PE R + M++KK +V + PLGVV A VS
Sbjct: 173 KTKVDATFGETLVTAEKLKWTIDHGERALSPESRPTNFLMMYKKNQVIYEPLGVVSACVS 232
Query: 125 WNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 184
WNYPFHN +P+++A+F+GNGIV+K SE +WS ++ II+ AL G P +LV +
Sbjct: 233 WNYPFHNFISPVISAIFAGNGIVVKPSEQTAWSSVYFLNIIRGALENCGHPRDLVQSVVC 292
Query: 185 FAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV---- 238
+ + L S + +I F+GS V + +A+K LTPVT+ELGGKD ++ DD
Sbjct: 293 LPKVADHLTSHPGIAQITFIGSRPVAHKVCESAAKALTPVTVELGGKDPSVILDDSRTIS 352
Query: 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 292
+V VA + +R QS+GQNC G ER +Y + V +K++ G L
Sbjct: 353 EVTSVASVLMRGVFQSAGQNCIGVERVIALPGVYDKLLDTVTSRIKALRLGSVL 406
|
|
| UNIPROTKB|P96405 MT0233 "PROBABLE ALDEHYDE DEHYDROGENASE" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 143/461 (31%), Positives = 236/461 (51%)
Query: 2 KYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEIS 59
+Y+G P + A+VD VA AR A W + +R + +K + E ++L ++
Sbjct: 35 EYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLL 94
Query: 60 SRDTGKTMVDASLGEIMTTCEKITWLLSEGEK--WLKPEYRSSGRSMIHKKAKVEFHPLG 117
+ +TG+ M + + + +K W + S G+S++ ++ P+G
Sbjct: 95 AAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSRE------PVG 148
Query: 118 VVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 177
VVGAIV+WN P N + A+ +G IV+K + + + A VG PE
Sbjct: 149 VVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTA----NALAEVFAEVGLPEG 204
Query: 178 LVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235
++ V+ G ETG+AL S+ +D F GS VGR + R A++ L P TLELGGK A I+
Sbjct: 205 VLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIIL 264
Query: 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 295
+DVD+ + V + + ++GQ C R R Y V+ V V ++ GPP
Sbjct: 265 EDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPA 324
Query: 296 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVIVNVNHTM 354
+G L + +++ + +++GA ++ G G EG + +F PTV +V++ M
Sbjct: 325 AQIGPLISEKQRTRVEGYIAKGIEEGARLVCGG--GR-PEGLDNGFFIQPTVFADVDNKM 381
Query: 355 KLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 414
+ QEE FGP++ I+ ++T+E+ + +ANDS YGL +V++ + +I+ QI+ G I
Sbjct: 382 TIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGI 441
Query: 415 NDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
N +A + PFGG K+SG GR G EG+ KSV+
Sbjct: 442 NWYAFD---PGSPFGGYKNSGIGRENGPEGVEHFTQQKSVL 479
|
|
| TAIR|locus:2100449 ALDH10A9 "AT3G48170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 153/476 (32%), Positives = 241/476 (50%)
Query: 4 LGYFPALSRAEVDERVAQARKA-----QKVWAKSSFKQRRQFLRILLKYIIEHQELICEI 58
+GY PA + +V+ V ARKA K WA+++ R ++LR + +IE + + +
Sbjct: 36 IGYIPAATSEDVELAVEAARKAFTRNNGKDWARATGAVRAKYLRAIAAKVIERKSELANL 95
Query: 59 SSRDTGKTMVDASLG-EIMTTCEKITWLLSEGEKWLKPEYRSS-GRSMIHKKAKVEFHPL 116
+ D GK + +A+ + + C + L+EG L + ++ M K + P+
Sbjct: 96 EAIDCGKPLDEAAWDMDDVAGCFEYYADLAEG---LDAKQKTPLSLPMDTFKGYILKEPI 152
Query: 117 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 176
GVVG I WNYP + ++ +G ++K SE AS + C I VG P
Sbjct: 153 GVVGMITPWNYPLLMAVWKVAPSLAAGCTAILKPSELASLT-CLELADI---CREVGLPP 208
Query: 177 NLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 233
+++++TG E G L S VDKI+F GS G IM +A+K + PV+LELGGK I
Sbjct: 209 GVLNILTGLGTEAGAPLASHPHVDKIVFTGSTTTGSSIMTSAAKLVKPVSLELGGKSPII 268
Query: 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 293
V DDVD+ + + ++GQ C+ R VH I F+ ++ K K++ P
Sbjct: 269 VFDDVDIDKAVEWTMFGCFWTNGQICSATSRLLVHERIADEFLDKLVKWTKNIKISDPFE 328
Query: 294 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG-HLSEGAVDQYF-PPTVIVNVN 351
+G + E++ V++A ++GA +L G HL +G YF P ++ NV
Sbjct: 329 EGCRLGPVVSKGQYERVLKFVSNARNEGATVLCGGVRPEHLKKG----YFVEPAIVSNVT 384
Query: 352 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 411
+M++ +EE FGP + + F+T++E ++LANDS+YGL AV S R ++ Q G+
Sbjct: 385 TSMEIWREEVFGPALCVKTFSTEDEAIQLANDSQYGLAGAVLSNDLERCDRVSKAFQAGI 444
Query: 412 AAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV---VEDRWWPYIK 464
+N + CQ+ P+GG K SGFGR G GL VK V + D W + K
Sbjct: 445 VWVN-CSQPCFCQA-PWGGTKRSGFGRELGEWGLENYLSVKQVTQYISDEPWGWYK 498
|
|
| TAIR|locus:2027186 ALDH10A8 "AT1G74920" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 157/473 (33%), Positives = 238/473 (50%)
Query: 4 LGYFPALSRAEVDERVAQARKAQ-----KVWAKSSFKQRRQFLRILLKYIIEHQELICEI 58
+G PA + +VD V AR+A K WAK+ R ++LR + + E + + ++
Sbjct: 36 IGDIPAATTEDVDVAVNAARRALSRNKGKDWAKAPGAVRAKYLRAIAAKVNERKTDLAKL 95
Query: 59 SSRDTGKTMVDASLG-EIMTTCEKITWLLSEGEKWLKPEYRSS-GRSMIHKKAKVEFHPL 116
+ D GK + +A + + C + L+EG L + ++ M K+ V PL
Sbjct: 96 EALDCGKPLDEAVWDMDDVAGCFEFYADLAEG---LDAKQKAPVSLPMESFKSYVLKQPL 152
Query: 117 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 176
GVVG I WNYP + ++ +G ++K SE AS + C I VG P
Sbjct: 153 GVVGLITPWNYPLLMAVWKVAPSLAAGCTAILKPSELASVT-CLELADI---CREVGLPP 208
Query: 177 NLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 233
+++V+TGF +E G L S VDKI F GS G +M A++ + PV++ELGGK I
Sbjct: 209 GVLNVLTGFGSEAGAPLASHPGVDKIAFTGSFATGSKVMTAAAQLVKPVSMELGGKSPLI 268
Query: 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 293
V DDVD+ A+ A+ ++GQ C+ R VH I + F+ ++ K K++ P+
Sbjct: 269 VFDDVDLDKAAEWALFGCFWTNGQICSATSRLLVHESIASEFIEKLVKWSKNIKISDPME 328
Query: 294 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG-HLSEGAVDQYFPPTVIVNVNH 352
+G + EK+ ++ A +GA IL GS HL +G + PT+I +V
Sbjct: 329 EGCRLGPVVSKGQYEKILKFISTAKSEGATILHGGSRPEHLEKGF---FIEPTIITDVTT 385
Query: 353 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 412
+M++ +EE FGP++ + F +++E ++LANDS YGLG AV S R I+ + G+
Sbjct: 386 SMQIWREEVFGPVLCVKTFASEDEAIELANDSHYGLGAAVISNDTERCDRISEAFEAGIV 445
Query: 413 AINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV----EDRW-W 460
IN S P+GGVK SGFGR G GL VK V D W W
Sbjct: 446 WIN--CSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTLYTSNDPWGW 496
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q802W2 | A9A1B_DANRE | 1, ., 2, ., 1, ., 3 | 0.3266 | 0.8275 | 0.8339 | yes | no |
| Q7ZVB2 | A9A1A_DANRE | 1, ., 2, ., 1, ., 3 | 0.3139 | 0.8256 | 0.8484 | yes | no |
| Q2YV11 | ALDA_STAAB | 1, ., 2, ., 1, ., 3 | 0.3144 | 0.8045 | 0.8484 | yes | no |
| Q9JLJ3 | AL9A1_RAT | 1, ., 2, ., 1, ., 3 | 0.3108 | 0.8218 | 0.8684 | yes | no |
| B1JSQ9 | BETB_YERPY | 1, ., 2, ., 1, ., 8 | 0.3008 | 0.8314 | 0.8857 | yes | no |
| B0VST2 | BETB_ACIBS | 1, ., 2, ., 1, ., 8 | 0.3156 | 0.8218 | 0.8755 | yes | no |
| Q0WSF1 | AL221_ARATH | 1, ., 2, ., 1, ., 3 | 0.8483 | 0.9980 | 0.8741 | yes | no |
| Q6GCV9 | ALDA_STAAS | 1, ., 2, ., 1, ., 3 | 0.3144 | 0.8045 | 0.8484 | yes | no |
| Q8D3K3 | BETB_VIBVU | 1, ., 2, ., 1, ., 8 | 0.3075 | 0.8180 | 0.8786 | yes | no |
| P49189 | AL9A1_HUMAN | 1, ., 2, ., 1, ., 1, 9 | 0.3131 | 0.8160 | 0.8623 | yes | no |
| Q9I6C8 | CALB_PSEAE | 1, ., 2, ., 1, ., 6, 8 | 0.3047 | 0.8199 | 0.8991 | yes | no |
| Q9JLJ2 | AL9A1_MOUSE | 1, ., 2, ., 1, ., 3 | 0.3130 | 0.8218 | 0.8684 | yes | no |
| Q7A1Y7 | ALDA_STAAW | 1, ., 2, ., 1, ., 3 | 0.3144 | 0.8045 | 0.8484 | yes | no |
| Q99X54 | ALDA_STAAM | 1, ., 2, ., 1, ., 3 | 0.3144 | 0.8045 | 0.8484 | yes | no |
| B2FQ90 | BETB_STRMK | 1, ., 2, ., 1, ., 8 | 0.3185 | 0.8237 | 0.8775 | yes | no |
| Q5R8A4 | AL9A1_PONAB | 1, ., 2, ., 1, ., 3 | 0.3131 | 0.8160 | 0.8623 | yes | no |
| Q9P7K9 | YOSF_SCHPO | 1, ., 2, ., 1, ., - | 0.3651 | 0.9329 | 0.9329 | yes | no |
| A3M365 | BETB_ACIBT | 1, ., 2, ., 1, ., 8 | 0.3134 | 0.8218 | 0.8755 | yes | no |
| Q7A825 | ALDA_STAAN | 1, ., 2, ., 1, ., 3 | 0.3144 | 0.8045 | 0.8484 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.2.1 | 0.983 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 522 | |||
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 0.0 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-155 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 1e-155 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 1e-141 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-138 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-110 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-106 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 1e-105 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-103 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 1e-102 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 3e-99 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 9e-98 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 3e-93 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 2e-92 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 4e-92 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 1e-88 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 3e-88 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 8e-88 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 9e-88 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 9e-88 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 5e-86 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 7e-86 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 2e-85 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 7e-85 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 7e-85 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 1e-83 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 2e-83 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 5e-83 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 2e-82 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 5e-81 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 7e-81 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 7e-81 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-80 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 3e-80 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 3e-80 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 3e-80 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 6e-80 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 3e-79 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 5e-79 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 2e-78 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 2e-78 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 1e-77 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-77 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 2e-76 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 4e-76 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 6e-76 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 5e-75 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 5e-74 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-73 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 8e-73 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 1e-72 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 3e-72 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 7e-72 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 2e-71 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 5e-71 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 1e-70 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 2e-69 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-67 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 5e-67 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-66 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 2e-66 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 5e-66 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 5e-66 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 2e-65 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 2e-64 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 3e-64 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 2e-63 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-61 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 3e-61 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 1e-60 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 9e-60 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 1e-59 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 8e-59 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 3e-58 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 6e-58 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 5e-57 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 8e-57 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 1e-56 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 4e-56 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 2e-54 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 3e-54 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 5e-54 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-52 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 5e-49 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 1e-46 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 1e-45 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 9e-44 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 9e-44 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 2e-41 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 8e-40 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 3e-39 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 6e-39 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 9e-37 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 6e-36 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 3e-33 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 8e-31 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 6e-28 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 5e-26 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 4e-25 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 8e-24 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 1e-22 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 2e-20 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 5e-20 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 4e-17 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 5e-15 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 9e-15 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 3e-13 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 1e-10 | |
| PRK15398 | 465 | PRK15398, PRK15398, aldehyde dehydrogenase EutE; P | 2e-10 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 1e-08 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 1e-08 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 1e-07 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 9e-06 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 3e-05 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 6e-05 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 4e-04 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 0.001 | |
| cd07127 | 549 | cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradat | 0.002 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 763 bits (1973), Expect = 0.0
Identities = 248/460 (53%), Positives = 316/460 (68%), Gaps = 2/460 (0%)
Query: 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISS 60
++LG PA + +VDE +A AR AQ+ WAK+SF +RR+ LR LLKYI+E+QE IC ++
Sbjct: 6 GQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVAC 65
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
RDTGKTMVDASLGEI+ TCEKI W L GEK L+PE R G M +K+A+VE+ PLGVVG
Sbjct: 66 RDTGKTMVDASLGEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVG 125
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AIVSWNYPFHN+ P++AA+F+GN IV+KVSE +WS F+ II+ LAA G +LV
Sbjct: 126 AIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQ 185
Query: 181 VITGFAETGEALVSSV--DKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238
++T ET EAL S D I F+GSP VG+ +M A+++LTPV LELGGKD IV DD
Sbjct: 186 LVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAIVLDDA 245
Query: 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 298
D+ +A I +R QSSGQNC G ER VH IY + + V+++ GPPL G D+
Sbjct: 246 DLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDV 305
Query: 299 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ 358
GA+ ++L+ LV DA++KGA +LA G E YFPPT++V+V MK+ Q
Sbjct: 306 GAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQ 365
Query: 359 EEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFA 418
EE FGP+M +MK + DEE V++AN + YGLG +VF RAR IA+Q++ G+ AINDF
Sbjct: 366 EEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFG 425
Query: 419 SNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458
NY Q LPFGGVK SGFGRFAG EGLR C KSV EDR
Sbjct: 426 VNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTEDR 465
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 450 bits (1160), Expect = e-155
Identities = 158/444 (35%), Positives = 227/444 (51%), Gaps = 15/444 (3%)
Query: 16 DERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 75
D VA AR A K WA +R LR L + E +E + + + +TGK ++ +LGE+
Sbjct: 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKP-IEEALGEV 59
Query: 76 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 135
+ + + S + A V PLGVVGAI WN+P
Sbjct: 60 ARAADTFRYYAGLARRLHGEVIPSPDP---GELAIVRREPLGVVGAITPWNFPLLLAAWK 116
Query: 136 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS 194
+ A+ +GN +V+K SE + ++ A G P +++V+TG E G AL S
Sbjct: 117 LAPALAAGNTVVLKPSELTPLTALLLAELLAEA----GLPPGVLNVVTGDGDEVGAALAS 172
Query: 195 S--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAAL 252
VDKI F GS VG+ IMR A++ L VTLELGGK IV DD D+ + AV A
Sbjct: 173 HPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAF 232
Query: 253 QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN 312
++GQ C A R VH IY FV ++ + VK++ G PL DMG L +++
Sbjct: 233 GNAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLA 292
Query: 313 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 372
+ DA +GA++L G +G + PPTV+ +V+ M + QEE FGP++P++ F
Sbjct: 293 YIEDAKAEGAKLLCGGKRLEGGKGY---FVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFK 349
Query: 373 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVK 432
+EE ++LAND+ YGL VF+ RA +A +++ G IND++ S PFGGVK
Sbjct: 350 DEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVG-AEPSAPFGGVK 408
Query: 433 DSGFGRFAGVEGLRACCLVKSVVE 456
SG GR G GL K+V
Sbjct: 409 QSGIGREGGPYGLEEYTEPKTVTI 432
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 450 bits (1161), Expect = e-155
Identities = 175/453 (38%), Positives = 247/453 (54%), Gaps = 10/453 (2%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
LG P AEV VA+AR AQ+ WA + R Q L + + +H + + E+ +T
Sbjct: 9 LGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAET 68
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 123
GK DA E++ E I W + L P +G M +KKA VE+ P GVVG I
Sbjct: 69 GKPRADA-GLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVIS 127
Query: 124 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 183
WNYP ++ A+ +GN +V+K SE G + A AA G P+ ++ V+T
Sbjct: 128 PWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGEL----LAEAWAAAGPPQGVLQVVT 183
Query: 184 GFAETGEALVSS-VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 242
G TG AL+ + VDK+ F GS GR +M A++ L PV LELGGKD IV D D+
Sbjct: 184 GDGATGAALIDAGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLADADLER 243
Query: 243 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 302
A AV A+ ++GQ C ER YVH +Y FV+++ +++ G G D+G +
Sbjct: 244 AAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMT 303
Query: 303 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAF 362
+ ++ V+DA+ KGA+ L G G S G ++ PTV+ +V H M +M+EE F
Sbjct: 304 TARQLDIVRRHVDDAVAKGAKALT-G--GARSNGG-GPFYEPTVLTDVPHDMDVMREETF 359
Query: 363 GPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 422
GP++P+M ++E + LANDSRYGL +VFS RA IA +++ G +IND
Sbjct: 360 GPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAG 419
Query: 423 CQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
+LPFGGVKDSG GR G EGLR C K++
Sbjct: 420 IPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 415 bits (1068), Expect = e-141
Identities = 160/456 (35%), Positives = 243/456 (53%), Gaps = 17/456 (3%)
Query: 2 KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
+ + PA + +VD VA AR A K WAK+ +R L + E ++ + E+ +
Sbjct: 18 EVIATVPAATAEDVDAAVAAARAAFKAWAKTPPSERAAILLKAADLLEERRDELAELETL 77
Query: 62 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGA 121
+TGK + +A GE+ + + + K L+ E S A PLGVVGA
Sbjct: 78 ETGKPLAEA-RGEVPRAIDTLRYYAGLARK-LEGETLPSDPG---VLAYTRREPLGVVGA 132
Query: 122 IVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 181
I WN+P + A+ +GN +V+K SE + + + A G P +++V
Sbjct: 133 ITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELFEEA----GLPPGVLNV 188
Query: 182 ITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238
+TG +E G+ALV VDK+ F GS VGR I + A+K L VTLELGGK+ IV DD
Sbjct: 189 VTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAKNLKRVTLELGGKNPLIVFDDA 248
Query: 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 298
D+ + AV A ++GQ C R VH IY FV ++ + KS+ G PL D+
Sbjct: 249 DLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKSLKVGDPLDPDTDI 308
Query: 299 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ 358
G L + E++ + + DA ++GA++L G G L +G + PTV+ +V M++ Q
Sbjct: 309 GPLISKKQRERVLSYIEDAKEEGAKLLCGGEAG-LEKGY---FVEPTVLADVTPDMRIAQ 364
Query: 359 EEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFA 418
EE FGP++ ++ F ++E ++LAND+ YGL VF+ RA +A +++ G+ IND+
Sbjct: 365 EEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRLEAGMVWINDYT 424
Query: 419 SNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
+ ++LPFGG K SGFGR G EGL K+V
Sbjct: 425 TGDP-EALPFGGFKQSGFGREGGKEGLEEYTETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 407 bits (1047), Expect = e-138
Identities = 156/454 (34%), Positives = 231/454 (50%), Gaps = 18/454 (3%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+ PA + +VD VA AR A + W++ S ++R LR + + E + + + +T
Sbjct: 27 IATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAALITLET 86
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 123
GK + +A GEI + I + E + + S V PLGVVGAI
Sbjct: 87 GKPISEA-RGEIARAADFIRYYAEEARRLEGETIPTDKGSKAL----VRREPLGVVGAIT 141
Query: 124 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 183
WN+P + A+ +GN +V+K SE S + A G P +++V+T
Sbjct: 142 PWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEA----GLPAGVLNVVT 197
Query: 184 GF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
G AE G+ALV+ VD I F GS VGR I A+ L PVTLELGGK IV +D D+
Sbjct: 198 GGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPVTLELGGKSPAIVLEDADL 257
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
AV A ++GQ C A R VH +Y FV ++ S+ G PL D+G
Sbjct: 258 DAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVARAASLKVGDPLDPSTDLGP 317
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
L E ++++ + DA+ +GA +LA G + PT++ V M++ +EE
Sbjct: 318 LISEEQLDRVEGYIEDAVAEGARLLAGGKRPG------GYFVEPTILEGVTPDMRIAREE 371
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
FGP++P+++F +EE ++LAND+ YGL A+F+ RA +A +++ G+ IND+
Sbjct: 372 IFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGG 431
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
LPFGGVK SG GR G GL VK+V
Sbjct: 432 ADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTV 465
|
Length = 472 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 334 bits (859), Expect = e-110
Identities = 163/462 (35%), Positives = 231/462 (50%), Gaps = 33/462 (7%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+G P A+ D + A A K W K++ ++R LR I E E + + + +
Sbjct: 10 IGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQ 69
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEFHPLGVV 119
GK + +A GE+ + W E R GR K+ V P+GVV
Sbjct: 70 GKPLAEA-RGEVDYAASFLEWFAEEAR-------RIYGRTIPSPAPGKRILVIKQPVGVV 121
Query: 120 GAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 176
AI WN+P I P LAA G +V+K +E S + + A G P
Sbjct: 122 AAITPWNFPAAMITRKIAPALAA---GCTVVLKPAEETPLSALALAELAEEA----GLPA 174
Query: 177 NLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 233
+++V+TG AE GEAL +S V KI F GS VG+++M A+ T+ V+LELGG FI
Sbjct: 175 GVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFI 234
Query: 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 293
V DD D+ A+ + +++GQ C A R YVH IY FV ++ + VK + G L
Sbjct: 235 VFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLD 294
Query: 294 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT 353
DMG L EK++ LV DA+ KGA++L G G ++ PTV+ +V
Sbjct: 295 EGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGK-RLGLGGY---FYEPTVLTDVTDD 350
Query: 354 MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 413
M +M EE FGP+ PI+ F+T++EV+ AND+ YGL VF+ RA +A ++ G+
Sbjct: 351 MLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVG 410
Query: 414 INDFA-SNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
IN S+ PFGGVK+SG GR G EGL K V
Sbjct: 411 INTGLISD---AEAPFGGVKESGLGREGGKEGLEEYLETKYV 449
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 325 bits (836), Expect = e-106
Identities = 147/459 (32%), Positives = 228/459 (49%), Gaps = 40/459 (8%)
Query: 8 PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
P S A++D+ VA A+ A W+ + ++RR L + I + E + + + + GK +
Sbjct: 14 PVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPL 73
Query: 68 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 127
+A E+ + WL L E ++ ++ PLGVV AIV WN+
Sbjct: 74 AEAQ-FEVGGA---VAWLRYTASLDLPDEVIEDDD---TRRVELRRKPLGVVAAIVPWNF 126
Query: 128 PFHNIFNPMLA------AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 181
P +LA A+ +GN +V+K S + Q L P +++V
Sbjct: 127 PL------LLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEVL-----PPGVLNV 175
Query: 182 ITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVD 239
++G E G AL S + KI F GS G+ +M +A+KTL VTLELGG DA IV DVD
Sbjct: 176 VSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPDVD 235
Query: 240 VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMG 299
+ VA A +SGQ CA +R YVH IY F + + K+ G L +G
Sbjct: 236 IDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLG 295
Query: 300 ALCLLEHSEKLQNLVNDALDKGAEILARGSF----GHLSEGAVDQYFPPTVIVNVNHTMK 355
+ +K++ LV DA KGA++LA G G+ + PPT++ + +
Sbjct: 296 PVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGY--------FIPPTIVDDPPEGSR 347
Query: 356 LMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 415
++ EE FGP++P++K++ ++EV+ ANDS YGLG +V+S RA +A +++ G IN
Sbjct: 348 IVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWIN 407
Query: 416 DFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
+ + PFGG K SG G G+EGL+ + +
Sbjct: 408 THGA--LDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVI 444
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 323 bits (829), Expect = e-105
Identities = 143/453 (31%), Positives = 216/453 (47%), Gaps = 21/453 (4%)
Query: 8 PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
P S V + +AR AQK W ++R+ + ++ + + + I E + G+
Sbjct: 13 PLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRP- 71
Query: 68 VDASLGEIMTTCEKITWLLSEGEKWLKPE--YRSSG--RSMIHKKAKVEFHPLGVVGAIV 123
+ + GEI E+ +++S E+ L G R + + PLGVV I
Sbjct: 72 IAQAGGEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRRE-------PLGVVLIIA 124
Query: 124 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 183
WNYP+ N ++ A+ +GN +++K S G AA A G PE + V+
Sbjct: 125 PWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGER----FAAAFAEAGLPEGVFQVLH 180
Query: 184 GFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVP 241
ET AL++ +D + F GS GR I R A+ V LELGGKD V D D+
Sbjct: 181 LSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADLD 240
Query: 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 301
A+ V A +SGQ+C ER YVH IY FV +VK G PL +G +
Sbjct: 241 AAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPV 300
Query: 302 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 361
++ ++ + DA+ KGA L G+ + Y PTV+ NV+H+M++M+EE
Sbjct: 301 VSARAADFVRAQIADAIAKGARALIDGALFPEDKAGG-AYLAPTVLTNVDHSMRVMREET 359
Query: 362 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 421
FGP++ IMK +D E + L NDS YGL +V++ RA + Q++ G +N +Y
Sbjct: 360 FGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMN--RCDY 417
Query: 422 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
+ +L + GVKDSG G G KS
Sbjct: 418 LDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSY 450
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 317 bits (816), Expect = e-103
Identities = 163/475 (34%), Positives = 229/475 (48%), Gaps = 57/475 (12%)
Query: 7 FPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG 64
P S A+VD VA AR A W K + +R + LR L I + E + E+ +RD G
Sbjct: 13 VPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNG 72
Query: 65 KTM--VDASLGEIMTT-------CEKI--TWLLSEGEKWLKPEYRSSGRSMIHKKAKVEF 113
K + A + + +KI + + K +Y + R
Sbjct: 73 KLIRETRAQVRYLAEWYRYYAGLADKIEGAVIPVD-----KGDYLNFTRRE--------- 118
Query: 114 HPLGVVGAIVSWNYPFHNIFN------PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 167
PLGVV AI WN P + P LAA GN +V+K SE+ S ++ +
Sbjct: 119 -PLGVVAAITPWNSP---LLLLAKKLAPALAA---GNTVVLKPSEHTPASTLELAKLAEE 171
Query: 168 ALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTL 224
A G P +V+V+TGF ETGEALV V KI F G GR I R A++ L PVTL
Sbjct: 172 A----GFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTL 227
Query: 225 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 284
ELGGK IV DD D+ V ++GQ C R V R IY FV ++ +
Sbjct: 228 ELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARAR 287
Query: 285 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILA---RGSFGHLSEGAVDQY 341
++ G PL + MG L EK++ V A ++GA +L R S L G +
Sbjct: 288 AIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAG---YF 344
Query: 342 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 401
F PT++ +V + M++ QEE FGP++ ++ F+ +EE + LANDS YGL +++ RA
Sbjct: 345 FEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAH 404
Query: 402 EIAAQIQCGVAAINDF-ASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
+A I+ G +N + A + PFGG KDSG GR G+E +R KSV
Sbjct: 405 RVARAIEAGTVWVNTYRALSPS---SPFGGFKDSGIGRENGIEAIREYTQTKSVW 456
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 314 bits (807), Expect = e-102
Identities = 146/445 (32%), Positives = 229/445 (51%), Gaps = 13/445 (2%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
LG P + A+V+ A+AR AQ+ WA F +R ++E ++ + ++ +T
Sbjct: 9 LGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLET 68
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 123
GK A E++ + E+ LKP R ++ + V P GVVG I
Sbjct: 69 GKARRHA-FEEVLDVAIVARYYARRAERLLKPRRRRGAIPVL-TRTTVNRRPKGVVGVIS 126
Query: 124 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 183
WNYP + + A+ +GN +V+K + + + ++ A G P +L V+T
Sbjct: 127 PWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEA----GLPRDLWQVVT 182
Query: 184 G-FAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 242
G +E G A+V + D ++F GS GR++ A + L +LELGGK+ IV +D D+
Sbjct: 183 GPGSEVGGAIVDNADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVLEDADLDK 242
Query: 243 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 302
A AVRA ++GQ C ER YVH +Y FV + +++ G L DMG+L
Sbjct: 243 AAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLI 302
Query: 303 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEA 361
+++ V+DA+ KGA +LA G + + YF PTV+ V M+L EE
Sbjct: 303 SQAQLDRVTAHVDDAVAKGATVLAGGR----ARPDLGPYFYEPTVLTGVTEDMELFAEET 358
Query: 362 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND-FASN 420
FGP++ I + D+E ++LAND+ YGL +V++ R R IAA+++ G +N+ +A+
Sbjct: 359 FGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYAAA 418
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGL 445
+ P GG+KDSG GR G EGL
Sbjct: 419 WASIDAPMGGMKDSGLGRRHGAEGL 443
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 305 bits (785), Expect = 3e-99
Identities = 144/458 (31%), Positives = 223/458 (48%), Gaps = 47/458 (10%)
Query: 15 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 74
++ + +A A W K+SF +R LR L + E ++ + + + + GK + +A E
Sbjct: 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEA-RAE 59
Query: 75 IMTTCEKITWLLS----EGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 130
+ EK W+ E +L E + KA V + PLGVV I+ WN+PF
Sbjct: 60 V----EKCAWICRYYAENAEAFLADEPIETD----AGKAYVRYEPLGVVLGIMPWNFPFW 111
Query: 131 NIFN---PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE 187
+F P L A GN +++K + N I+ G PE + + +
Sbjct: 112 QVFRFAAPNLMA---GNTVLLKHASNVPGCA----LAIEELFREAGFPEGVFQNL--LID 162
Query: 188 TGEALVSSVDKII---------FVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238
+ + V+ II GS GR + A K L LELGG D FIV DD
Sbjct: 163 SDQ-----VEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDA 217
Query: 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 298
D+ + AV+ LQ++GQ+C A+RF VH D+Y F+ + + + ++ G P+ D+
Sbjct: 218 DLDKAVKTAVKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDL 277
Query: 299 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ 358
G L + ++L V +A+ GA +L G GA ++PPTV+ +V M
Sbjct: 278 GPLARKDLRDELHEQVEEAVAAGATLLLGGKR-PDGPGA---FYPPTVLTDVTPGMPAYD 333
Query: 359 EEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF- 417
EE FGP+ ++K +EE + LANDS +GLG +VF+ RA +A +++ G+ IN
Sbjct: 334 EELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMV 393
Query: 418 ASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
S+ LPFGGVK SG+GR G G+R +K+V
Sbjct: 394 KSD---PRLPFGGVKRSGYGRELGRFGIREFVNIKTVW 428
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 305 bits (783), Expect = 9e-98
Identities = 155/473 (32%), Positives = 233/473 (49%), Gaps = 37/473 (7%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY---IIEHQELICEISS 60
L P + A+V+ A+AR AQ+ WA + ++R +LL++ ++E++E + ++
Sbjct: 45 LATVPVSTAADVEAAFARARAAQRAWAATPVRER---AAVLLRFHDLVLENREELLDLVQ 101
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
+TGK A E++ + K L P R+ ++ K P GVVG
Sbjct: 102 LETGKARRHA-FEEVLDVALTARYYARRAPKLLAPRRRAGALPVL-TKTTELRQPKGVVG 159
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV------GA 174
I WNYP + + A+ +GN +V+K + ALAAV G
Sbjct: 160 VISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLT----------ALAAVELLYEAGL 209
Query: 175 PENLVDVITG-FAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 233
P +L V+TG G ALV + D ++F GS GR++ A + L +LELGGK+ I
Sbjct: 210 PRDLWQVVTGPGPVVGTALVDNADYLMFTGSTATGRVLAEQAGRRLIGFSLELGGKNPMI 269
Query: 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 293
V DD D+ A AVRA ++GQ C ER YVH IY FV V+++ G
Sbjct: 270 VLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYD 329
Query: 294 GKYDMGALCLLEHSEKLQNLVNDALDKGAEIL----ARGSFGHLSEGAVDQYFPPTVIVN 349
DMG+L E + V+DA+ KGA +L AR G L ++ PTV+
Sbjct: 330 YSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPL-------FYEPTVLTG 382
Query: 350 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 409
V M+L +EE FGP++ + +E V+ AND+ YGL +V++G R R IAA+I+
Sbjct: 383 VTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRA 442
Query: 410 GVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWP 461
G +N+ +A+ + P GG+KDSG GR G EGL +++ R P
Sbjct: 443 GTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQRVLP 495
|
Length = 524 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 291 bits (747), Expect = 3e-93
Identities = 151/466 (32%), Positives = 222/466 (47%), Gaps = 45/466 (9%)
Query: 8 PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
P AEVD VA A++A W++ S +R + L + I + + + S DTGK +
Sbjct: 14 PEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPI 73
Query: 68 VDASLGEIMTTCEKI-----TWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAI 122
A +I L +GE Y G ++ + V P+GV G I
Sbjct: 74 TLARTRDIPRAAANFRFFADYILQLDGE-----SYPQDGGALNY----VLRQPVGVAGLI 124
Query: 123 VSWNYPFHNIFNPMLA------AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 176
WN P ML A+ GN +V+K SE + + A G P
Sbjct: 125 TPWNLPL------MLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEA----GLPP 174
Query: 177 NLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 233
+V+V+ GF E G ALV+ VD I F G GR IMR A+ L PV+LELGGK+ I
Sbjct: 175 GVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNI 234
Query: 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 293
V D D+ AVR++ ++G+ C R V R IY F+ + + K++ G PL
Sbjct: 235 VFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLD 294
Query: 294 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS---FGHLSEGAVDQYFPPTVIVNV 350
++G L EH EK+ V A +GA IL G L G + PTVI +
Sbjct: 295 PDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGY---FVEPTVITGL 351
Query: 351 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 410
++ ++ QEE FGP++ ++ F+ +EE ++LAND+ YGL V++ RA +A +++ G
Sbjct: 352 DNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAG 411
Query: 411 VAAINDFASNYMCQSL--PFGGVKDSGFGRFAGVEGLRACCLVKSV 454
+N + + + L PFGGVK SG GR G L +K+V
Sbjct: 412 TVWVNCW----LVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNV 453
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 289 bits (741), Expect = 2e-92
Identities = 144/464 (31%), Positives = 220/464 (47%), Gaps = 25/464 (5%)
Query: 3 YLGYFPALSRAEVDERVAQARKAQKVWAKS-SFKQRRQFLRILLKYIIEHQELICEISSR 61
+G P A+VD +A AR+A S ++R + LR L + + +E + +
Sbjct: 9 VIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVA 68
Query: 62 DTGKTM-------VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 114
+ G + VD +G + + E + + GR ++ ++
Sbjct: 69 EVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRRE------ 122
Query: 115 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 174
P+GVV AI WN+PF + A+ +GN +V+K + + S II A
Sbjct: 123 PVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEII----AETDL 178
Query: 175 PENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 231
P +V+V+TG GEAL + VD + F GS VGR IM A+ TL V LELGGK A
Sbjct: 179 PAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSA 238
Query: 232 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 291
IV DD D+ A AV + ++GQ CA R V R Y V +A +++ G P
Sbjct: 239 NIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDP 298
Query: 292 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN 351
MG L ++++ + D+GA ++ G G + Y PT+ +V+
Sbjct: 299 ADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGG--GRPAGLDKGFYVEPTLFADVD 356
Query: 352 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 411
+ M++ QEE FGP++ ++ ++ D+E V++ANDS YGL V+S RA +A +I+ G
Sbjct: 357 NDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGS 416
Query: 412 AAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
IN PFGG K SG GR G+EGL KS+
Sbjct: 417 VGINGGG--GYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 287 bits (737), Expect = 4e-92
Identities = 148/439 (33%), Positives = 211/439 (48%), Gaps = 34/439 (7%)
Query: 14 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 73
+VD A A AQK WA + ++R LR + + E ++ I + R++G T A+
Sbjct: 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAA-F 59
Query: 74 EIMTTCEKITWLLSEGEKWLKPEYRSSGR---SMIH-KKAKVEFHPLGVVGAIVSWNYPF 129
E+ +L E R G S + K++ V PLGVVG I +N+P
Sbjct: 60 EVGAAIA----ILREAAGLP---RRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPL 112
Query: 130 H---NIFNPMLAAVFSGNGIVIKVSENASWSGCFYF-RIIQAALAAVGAPENLVDVITG- 184
P LA GN +V+K +G I + A G P+ +++V+ G
Sbjct: 113 ILAMRSVAPALAL---GNAVVLKPDSRTPVTGGLLIAEIFEEA----GLPKGVLNVVPGG 165
Query: 185 FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 242
+E G+ALV V I F GS VGR I A + L V LELGG + IV DD D+
Sbjct: 166 GSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDL 225
Query: 243 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 302
A A GQ C A R VH +Y FV ++ K++ G P +G L
Sbjct: 226 AVSAAAFGAFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLI 285
Query: 303 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAF 362
+++ +V DA+ GA +L G++ EG + PTV+ +V M + +EE F
Sbjct: 286 NERQVDRVHAIVEDAVAAGARLLTGGTY----EGLF---YQPTVLSDVTPDMPIFREEIF 338
Query: 363 GPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 422
GP+ P++ F+ DEE V+LAND+ YGL AVF+ RA A +++ G+ IND N
Sbjct: 339 GPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDE 398
Query: 423 CQSLPFGGVKDSGFGRFAG 441
PFGGVK SG GRF G
Sbjct: 399 PHV-PFGGVKASGGGRFGG 416
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 279 bits (716), Expect = 1e-88
Identities = 143/452 (31%), Positives = 219/452 (48%), Gaps = 25/452 (5%)
Query: 13 AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
A+VD VA AR+A VW++ S +R+ L L I H++ + + + D GK + DA
Sbjct: 24 ADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPISDA 83
Query: 71 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 130
++ + W +K + E +G + A + PLGVVGA+V WN+P
Sbjct: 84 LAVDVPSAANTFRWYAEAIDK-VYGEVAPTGPDAL---ALITREPLGVVGAVVPWNFPLL 139
Query: 131 NI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE 187
P LAA GN +V+K +E + + R+ + AL A G P +++V+ GF
Sbjct: 140 MAAWKIAPALAA---GNSVVLKPAEQSPLTA---LRLAELALEA-GLPAGVLNVVPGFGH 192
Query: 188 T-GEALV--SSVDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDV-DVPH 242
T GEAL VD + F GS VGR + + ++ L V LE GGK IV D D+
Sbjct: 193 TAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPNIVFADAPDLDA 252
Query: 243 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 302
A+ A + G+ C+ R VH I F+ +V + G PL MGAL
Sbjct: 253 AAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALV 312
Query: 303 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAF 362
H +K+ + +GA ++A G G + PTV V M++ +EE F
Sbjct: 313 SEAHFDKVLGYIESGKAEGARLVAGGKRVLTETG--GFFVEPTVFDGVTPDMRIAREEIF 370
Query: 363 GPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 422
GP++ ++ F+++EE V LANDS YGL +V++ RA +A +++ G +N F +
Sbjct: 371 GPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDI 430
Query: 423 CQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
+ PFGG K SG GR + L +K+
Sbjct: 431 --TTPFGGFKQSGNGRDKSLHALDKYTELKTT 460
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 278 bits (714), Expect = 3e-88
Identities = 138/424 (32%), Positives = 221/424 (52%), Gaps = 32/424 (7%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+ PA + + D V A AQK W + +R +LR L I E+ + + ++ +
Sbjct: 26 VATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKLIVEEQ 85
Query: 64 GKTMVDASLGEIMTTCEKITWLLS-----EGEKWLKPEYRSSGRSMIHKKAKVEFHPLGV 118
GKT+ A E+ T + I ++ EGE + P R + I K P+GV
Sbjct: 86 GKTLSLAR-VEVEFTADYIDYMAEWARRIEGE--IIPSDRPNENIFIFKV------PIGV 136
Query: 119 VGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENL 178
V I+ WN+PF I + A+ +GN IVIK SE + + ++ A G P +
Sbjct: 137 VAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEA----GLPAGV 192
Query: 179 VDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235
++++TG + G+ALV+ V I GS G+ IM A++ +T V+LELGGK IV
Sbjct: 193 LNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVSLELGGKAPAIVM 252
Query: 236 DDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 291
D D+ +AV+A + S GQ C AER YVH DIY F+ ++ + +K+V G P
Sbjct: 253 KDADL----DLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDP 308
Query: 292 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN 351
DMG L +K++ +V A++ GA +L G +G ++ PTV+ NV
Sbjct: 309 FDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKG---YFYEPTVLTNVR 365
Query: 352 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 411
M+++QEE FGP++P++KF++ +E ++LANDS YGL +++ + + A +++ G
Sbjct: 366 QDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGE 425
Query: 412 AAIN 415
IN
Sbjct: 426 TYIN 429
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 277 bits (710), Expect = 8e-88
Identities = 148/470 (31%), Positives = 228/470 (48%), Gaps = 44/470 (9%)
Query: 4 LGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRD 62
A+VD V AR+A + W + S +R + L + + I EH + + + S D
Sbjct: 10 FARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLD 69
Query: 63 TGKTMVDASLGEIM----------TTCEKITWLLSEGEKW-LKPEYRSSGRSMIHKKAKV 111
TGK + A ++ +K+ GE L P Y
Sbjct: 70 TGKPLTQAR-ADVEAAARYFEYYGGAADKL-----HGETIPLGPGYFVY----------T 113
Query: 112 EFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 171
P GV G I+ WNYP + A+ +GN +V+K +E+A + R+ + A A
Sbjct: 114 VREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTAL---RLAELAEEA 170
Query: 172 VGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 228
G P ++V+TG AE G ALV+ VD I F GS G +MR A++ + PVTLELGG
Sbjct: 171 -GLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGG 229
Query: 229 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 288
K IV D D+ + V A +Q++GQ C+ R VHR IY + ++ + +++
Sbjct: 230 KSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRV 289
Query: 289 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF--GHLSEGAVDQYFPPTV 346
GP L D+G L + ++++ V A +GA I+A G G + G + PT+
Sbjct: 290 GPGLEDP-DLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGY---FVAPTL 345
Query: 347 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 406
+ +V +L QEE FGP++ +M F+ + E + LAN + YGL V++ RA +A +
Sbjct: 346 LDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARR 405
Query: 407 IQCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
++ G +N+ A + LPFGGVK SG GR G+E L K+V
Sbjct: 406 LRAGQVFVNNYGAGGGI--ELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 277 bits (712), Expect = 9e-88
Identities = 146/468 (31%), Positives = 220/468 (47%), Gaps = 54/468 (11%)
Query: 11 SRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 68
+VD V AR A + W K ++R + L L I ++ + + S D GK +
Sbjct: 39 DEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRDELAALESLDNGKPLE 98
Query: 69 DASLGEIMTT----------CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEF---HP 115
+++ G++ + +KI G+++ + + P
Sbjct: 99 ESAKGDVALSIKCLRYYAGWADKIQ-----------------GKTIPIDGNFLAYTRREP 141
Query: 116 LGVVGAIVSWNYP---FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 172
+GV G I+ WN+P P LAA GN +V+K +E S + +I+ A
Sbjct: 142 IGVCGQIIPWNFPLLMLAWKLAPALAA---GNTVVLKPAEQTPLSALYLAELIKEA---- 194
Query: 173 GAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGG 228
G P +V+++ GF T G A+ S VDKI F GS VGR IM A+K+ L VTLELGG
Sbjct: 195 GFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTLELGG 254
Query: 229 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 288
K IV DD D+ + A + GQ C R +V IY FV + +
Sbjct: 255 KSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVV 314
Query: 289 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVI 347
G P G +K+ + + +GA +L G H S+G YF PTV
Sbjct: 315 GDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGE-RHGSKG----YFIQPTVF 369
Query: 348 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 407
+V MK+ +EE FGP++ I+KF T++EV++ AND+ YGL VF+ ++A ++ +
Sbjct: 370 TDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRAL 429
Query: 408 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
+ G +N + N ++PFGG K SGFGR G EGL VK+V
Sbjct: 430 KAGTVWVNTY--NVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVT 475
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 277 bits (710), Expect = 9e-88
Identities = 147/466 (31%), Positives = 218/466 (46%), Gaps = 38/466 (8%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
L +VD V A+ AQK W+ +S +R + LR + E + I + + D
Sbjct: 10 LATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDN 69
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKK---------AKVEFH 114
GK + +A + +I ++ + + EY + + + A
Sbjct: 70 GKPIEEARV-DIDSSADCL-------------EYYAGLAPTLSGEHVPLPGGSFAYTRRE 115
Query: 115 PLGVVGAIVSWNYPFHNIF---NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 171
PLGV I +WNYP P LA GN +V K S + I+ A
Sbjct: 116 PLGVCAGIGAWNYPIQIASWKSAPALAC---GNAMVYKPSPFTPLTALLLAEILTEA--- 169
Query: 172 VGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 229
G P+ + +V+ G ETG+ L V K+ F GS G+ +M A+K + VTLELGGK
Sbjct: 170 -GLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGK 228
Query: 230 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 289
I+ DD D+ + A+ A S GQ C+ R +V R I F ++ + K + G
Sbjct: 229 SPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIG 288
Query: 290 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD-QYFPPTVIV 348
PL MGAL EH EK+ + A +GA++L G +G + Y P V+
Sbjct: 289 DPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLT 348
Query: 349 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 408
+ M +++EE FGP+M I+ F+T+EEV++ AND+ YGL VF+ RA + AQ+Q
Sbjct: 349 DCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQ 408
Query: 409 CGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
G IN + N +PFGG K SGFGR G L +K+V
Sbjct: 409 AGTCWINTY--NISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTV 452
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 272 bits (697), Expect = 5e-86
Identities = 140/428 (32%), Positives = 210/428 (49%), Gaps = 15/428 (3%)
Query: 33 SFKQRRQFLRILLKYIIEHQELICEISSRDTG-KTMVDASLGEIMTTCEKITWLLSEGEK 91
S ++RR L L ++++Q+ + E S D G ++ + L EI+ + I +K
Sbjct: 18 SLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKK 77
Query: 92 WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 151
W+KP R G + KA+VE+ PLGVVG IV WNYP + P++AA+ +GN ++IK S
Sbjct: 78 WMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPS 137
Query: 152 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSV--DKIIFVGSPGVGR 209
E + ++ E+ V V+TG A+ A SS+ D ++F GS VGR
Sbjct: 138 EFTPRTSALLAELLAEYF-----DEDEVAVVTGGADVAAA-FSSLPFDHLLFTGSTAVGR 191
Query: 210 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 269
+MR A++ LTPVTLELGGK I+ D D+ A+ L ++GQ C + V
Sbjct: 192 HVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPE 251
Query: 270 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 329
D FV+ V + P LA D ++ H +LQ L+ DA KGA ++
Sbjct: 252 DKLEEFVAAAKAAVAKMY--PTLADNPDYTSIINERHYARLQGLLEDARAKGARVI---E 306
Query: 330 FGHLSEGAVD-QYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 388
E + PPT+++NV M++MQEE FGPI+PI+ +++ +E + N L
Sbjct: 307 LNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPL 366
Query: 389 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRAC 448
F + + + G IND + LPFGGV SG G + G EG
Sbjct: 367 ALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHVAQDDLPFGGVGASGMGAYHGKEGFLTF 426
Query: 449 CLVKSVVE 456
K V +
Sbjct: 427 SHAKPVFK 434
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 272 bits (699), Expect = 7e-86
Identities = 134/462 (29%), Positives = 213/462 (46%), Gaps = 24/462 (5%)
Query: 2 KYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEIS 59
+ +G P + A+VD VA AR+A W + S +R LR L + + + +
Sbjct: 25 EVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADELARLW 84
Query: 60 SRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSS---GRSMIHKKAKVEFHPL 116
+ + G + + + + + + + E R G ++ ++ P+
Sbjct: 85 TAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRRE------PV 138
Query: 117 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 176
GVV AIV WN P + A+ +G +V+K S ++ A G P
Sbjct: 139 GVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAY----LLAEAAEEAGLPP 194
Query: 177 NLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 234
+V+V+ E GE LV VDK+ F GS GR I + L VTLELGGK A IV
Sbjct: 195 GVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERLARVTLELGGKSAAIV 254
Query: 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 294
DD D+ V A+L ++GQ C R V R Y V +A V ++ G PL
Sbjct: 255 LDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDP 314
Query: 295 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-GHLSEGAVDQYFPPTVIVNVNHT 353
+G L E+++ + +GA ++ G L G + PT+ +V++
Sbjct: 315 ATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRG---WFVEPTLFADVDND 371
Query: 354 MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 413
M++ QEE FGP++ ++ ++ +++ V++ANDS YGL +V++ R +A +I+ G
Sbjct: 372 MRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVG 431
Query: 414 INDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
+N F + PFGG K SG GR G EGL A KS+
Sbjct: 432 VNGF---RLDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 272 bits (697), Expect = 2e-85
Identities = 147/463 (31%), Positives = 227/463 (49%), Gaps = 28/463 (6%)
Query: 3 YLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
+ A +VD+ V ARKA + W+K + ++R + L L + ++++L+ I +
Sbjct: 35 VIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDLLAAIEAL 94
Query: 62 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEF---HPLGV 118
D+GK +LG++ I + +K G+++ K+ + P GV
Sbjct: 95 DSGKPYHSNALGDLDEIIAVIRYYAGWADK-------IQGKTIPTSPNKLAYTLHEPYGV 147
Query: 119 VGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 175
G I+ WNYP P LAA GN +VIK +EN S ++ +++ A G P
Sbjct: 148 CGQIIPWNYPLAMAAWKLAPALAA---GNTVVIKPAENTPLSLLYFANLVKEA----GFP 200
Query: 176 ENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 232
+V++I G+ A G AL VDKI F GS GR++M+ A++ L VTLE GGK
Sbjct: 201 PGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQNLKAVTLECGGKSPA 260
Query: 233 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA-GPP 291
+V +D D+ + A + +SGQNC R YV IY FV + + VK G P
Sbjct: 261 LVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSP 320
Query: 292 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN 351
+G +++ + + +GA+ L G + PPT+ +V
Sbjct: 321 FDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAK-LVYGGEKAPEGLGKGYFIPPTIFTDVP 379
Query: 352 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 411
M++++EE FGP++ I KF T EE +K AND+ YGL AVF+ RA +A +++ G+
Sbjct: 380 QDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGM 439
Query: 412 AAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
IN +SN +PFGG K SG GR G GL K+V
Sbjct: 440 VWIN--SSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAV 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 270 bits (692), Expect = 7e-85
Identities = 132/461 (28%), Positives = 212/461 (45%), Gaps = 39/461 (8%)
Query: 8 PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG--- 64
P + A+VD VA AR+A W+ +S ++R L + + + + + + + G
Sbjct: 31 PLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQAITLEMGAPI 90
Query: 65 ----KTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
V +G + + + ++ + G S++ ++ P+GV G
Sbjct: 91 TLARAAQVGLGIGHLRAAAD-----ALKDFEFEERR----GNSLVVRE------PIGVCG 135
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
I WN+P + I + A+ +G +V+K SE A S I+ L G P + +
Sbjct: 136 LITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSA----IILAEILDEAGLPAGVFN 191
Query: 181 VITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237
++ G GEAL + VD + F GS G+ + A+ T+ V LELGGK A I+ DD
Sbjct: 192 LVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKRVALELGGKSANIILDD 251
Query: 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD 297
D+ V A +SGQ+C R V R YA A ++ G P
Sbjct: 252 ADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATT 311
Query: 298 MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH---LSEGAVDQYFPPTVIVNVNHTM 354
+G L +++Q + +++GA ++A G G L G + PTV +V M
Sbjct: 312 LGPLASAAQFDRVQGYIQKGIEEGARLVAGGP-GRPEGLERGY---FVKPTVFADVTPDM 367
Query: 355 KLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 414
+ +EE FGP++ I+ ++ ++E + +AND+ YGL V+S RAR +A +++ G I
Sbjct: 368 TIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHI 427
Query: 415 NDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
N A N PFGG K SG GR G GL VKS+
Sbjct: 428 NGAAFNP---GAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 269 bits (690), Expect = 7e-85
Identities = 149/454 (32%), Positives = 221/454 (48%), Gaps = 17/454 (3%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+ S +VD VA AR A + W+ +R + L L + I+ + + + + S DT
Sbjct: 10 IARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDT 69
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 123
GK + A ++ + + +K G + + + P+GVVGAIV
Sbjct: 70 GKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVRE----PVGVVGAIV 125
Query: 124 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 183
WN+P + A+ +GN +V+K +E S RI + A G P +++V+T
Sbjct: 126 PWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSA---LRIAELM-AEAGFPAGVLNVVT 181
Query: 184 GFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
GF E G ALV VDKI F GS VGR IM+ A+ L V+LELGGK A IV D D+
Sbjct: 182 GFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFADADL 241
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
+ A + GQ C R VH IY F+ + + +S+ G PL K MG
Sbjct: 242 DAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGP 301
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
L +++ + V+ ++GA +L G GA + PT+ V M++ QEE
Sbjct: 302 LVSQAQFDRVLDYVDVGREEGARLLTGGK----RPGARGFFVEPTIFAAVPPEMRIAQEE 357
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
FGP++ +M+F +EE +++AN + YGL V++ RA +AA ++ G IN + N
Sbjct: 358 IFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTY--N 415
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
PFGG K SGFGR G E L VKSV
Sbjct: 416 RFDPGSPFGGYKQSGFGREMGREALDEYTEVKSV 449
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 266 bits (683), Expect = 1e-83
Identities = 142/463 (30%), Positives = 218/463 (47%), Gaps = 31/463 (6%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAK-SSFKQRRQFLRILLKYIIEHQELICEISSRD 62
+G PALS E+ E A A + W ++R L + E++E + + +
Sbjct: 29 IGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEEVANLLMWE 88
Query: 63 TGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIH---KKAKVEFHPLGVV 119
GKT+ DA L E+ T + I + E ++ L + G K A+V PLGVV
Sbjct: 89 IGKTLKDA-LKEVDRTIDYIRDTIEELKR-LDGDS-LPGDWFPGTKGKIAQVRREPLGVV 145
Query: 120 GAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLV 179
AI +NYP + + ++ A+ GN +V K + G A G P+ +V
Sbjct: 146 LAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAE----AFHDAGFPKGVV 201
Query: 180 DVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236
+V+TG E G+ LV+ +D I F GS VG + + + LELGGKD IV
Sbjct: 202 NVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHPMK--RLVLELGGKDPAIVLP 259
Query: 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 296
D D+ A+ V+ AL SGQ C +R VH + V + + V + G P
Sbjct: 260 DADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNGV 319
Query: 297 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 356
D+ L + ++ ++ L++DA+ KGA +L G PT++ V M+L
Sbjct: 320 DITPLIDPKSADFVEGLIDDAVAKGATVLNGG------GREGGNLIYPTLLDPVTPDMRL 373
Query: 357 MQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 416
EE FGP++PI++ N EE ++LAN S YGL ++F+ ++AR++A ++ G IN
Sbjct: 374 AWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINS 433
Query: 417 FASNYMCQ----SLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
CQ PF G KDSG G + LR+ K +V
Sbjct: 434 -----KCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIV 471
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 265 bits (679), Expect = 2e-83
Identities = 151/463 (32%), Positives = 221/463 (47%), Gaps = 55/463 (11%)
Query: 14 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM------ 67
+ D+ V A A W+K+ +RR L + ++ E +TG T
Sbjct: 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFN 60
Query: 68 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 127
VD + G + IT ++ P + +M+ K+ P+GVV I WN
Sbjct: 61 VDLAAGMLREAASLITQIIGG----SIPSDKPGTLAMVVKE------PVGVVLGIAPWNA 110
Query: 128 PFH----NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 183
P I P LAA GN +V+K SE + + I + A G P+ +++V+T
Sbjct: 111 PVILGTRAIAYP-LAA---GNTVVLKASELSP--RTHWL-IGRVFHEA-GLPKGVLNVVT 162
Query: 184 GFAETG----EALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237
E EAL++ V K+ F GS VGR+I A+K L PV LELGGK IV +D
Sbjct: 163 HSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLED 222
Query: 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK-Y 296
D+ A A+ A +SGQ C ER VH I FV ++ + + AGP + G
Sbjct: 223 ADLDAAANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAGPVVLGSLV 282
Query: 297 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 356
A +++++ LV+DAL KGA+++ G G E PPT++ NV M +
Sbjct: 283 SAAA------ADRVKELVDDALSKGAKLVV-G--GLADESPSGTSMPPTILDNVTPDMDI 333
Query: 357 MQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN- 415
EE+FGP++ I++ +EE V++ANDS YGL AVF+ RA +A +I+ G IN
Sbjct: 334 YSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHING 393
Query: 416 ----DFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
D +LP GGVK SG+GRF G G+ K +
Sbjct: 394 MTVHDEP------TLPHGGVKSSGYGRFNGKWGIDEFTETKWI 430
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 264 bits (678), Expect = 5e-83
Identities = 153/460 (33%), Positives = 237/460 (51%), Gaps = 40/460 (8%)
Query: 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISS 60
+ + P+LSR EV E + A KA+ V + +R + L + + I +E + ++ +
Sbjct: 9 GEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLT 68
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLS-------EGEKWLKPEYRSSGRSMIHKKAKVEF 113
+ GK + S E+ T + L+ GE Y + R +
Sbjct: 69 IEVGKPIKQ-SRVEVERTIR--LFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVR---- 121
Query: 114 HPLGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 169
P+GVVGAI +N+P H I P +A GN +V+K S N + +I++ A
Sbjct: 122 EPIGVVGAITPFNFPANLFAHKI-APAIAV---GNSVVVKPSSNTPLTAIELAKILEEA- 176
Query: 170 AAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 226
G P +++V+TG+ G+ +V++ V+ I F GS VG +I A T V LEL
Sbjct: 177 ---GLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALEL 233
Query: 227 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 286
GG D IV D D+ IAVR +++GQ C +R V ++Y F+ + + VK +
Sbjct: 234 GGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKL 293
Query: 287 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 346
G PL D+G L E E+++NLVNDA++KG +IL G + +FPPTV
Sbjct: 294 KVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGG------KRDEGSFFPPTV 347
Query: 347 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 406
+ N M +M+EE FGP++PI K DEE V++AN + YGL +VF+ +RA ++A +
Sbjct: 348 LENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARE 407
Query: 407 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 446
++ G IND ++ + +LPFGG K SG GR EG+R
Sbjct: 408 LEAGGVVIND-STRFRWDNLPFGGFKKSGIGR----EGVR 442
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 262 bits (672), Expect = 2e-82
Identities = 139/434 (32%), Positives = 219/434 (50%), Gaps = 13/434 (2%)
Query: 17 ERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 75
RV A++A S+ +R L+ L K I+ +E I + D K + L EI
Sbjct: 1 RRVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEI 60
Query: 76 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 135
+ +I + +KW+KP+ + + K+K+ + P GV I WNYPF+ F P
Sbjct: 61 LPVLSEINHAIKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGP 120
Query: 136 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS- 194
+++A+ +GN ++K SE + +II+ A E+ V V G AE +AL+
Sbjct: 121 LVSAIAAGNTAILKPSELTPHTSAVIAKIIREAF-----DEDEVAVFEGDAEVAQALLEL 175
Query: 195 SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 254
D I F GSP VG+++M A+K L VTLELGGK IV + D+ A+ +
Sbjct: 176 PFDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLN 235
Query: 255 SGQNCAGAERFYVHRDIYALFVSQV-AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 313
+GQ C + +VH + FV + A+I K D+ + H ++L+ L
Sbjct: 236 AGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGL 295
Query: 314 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT 373
++DA+ KGA++ G F A +Y PTV+ NV MK+MQEE FGP++PI+ +
Sbjct: 296 LDDAVAKGAKVEFGGQFD-----AAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYED 350
Query: 374 DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKD 433
+EV++ N L VFS + ++ A+ G +ND +++ +LPFGGV +
Sbjct: 351 LDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNN 410
Query: 434 SGFGRFAGVEGLRA 447
SG G + GV G +A
Sbjct: 411 SGIGSYHGVYGFKA 424
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 260 bits (666), Expect = 5e-81
Identities = 144/479 (30%), Positives = 225/479 (46%), Gaps = 44/479 (9%)
Query: 8 PALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGK 65
P + + +A AR+A W ++R L + I E E + + + +TGK
Sbjct: 30 PEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELARLETLNTGK 89
Query: 66 TMVDAS--LGEIMTTCEKITWLLSE--GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGA 121
T+ ++ + ++ L ++ GE + P H ++ P+GV G
Sbjct: 90 TLRESEIDIDDVANCFRYYAGLATKETGEVYDVPP---------HVISRTVREPVGVCGL 140
Query: 122 IVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENL 178
I WNYP P LAA GN +VIK SE + F +I G P +
Sbjct: 141 ITPWNYPLLQAAWKLAPALAA---GNTVVIKPSEVTPLTTIALFELI----EEAGLPAGV 193
Query: 179 VDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235
V+++TG T G L S VD + F G GR IMR A+ + V LELGGK+ IV
Sbjct: 194 VNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKKVALELGGKNPNIVF 253
Query: 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 295
D D A+ ++GQ C+ R V I+ FV+ +A+ K + G L
Sbjct: 254 ADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDAD 313
Query: 296 YDMGALCLLEHSEKLQNLVNDALDKGAEILA---RGSFGHLSEGAVDQYFPPTVIVNVNH 352
+MG L EH EK+ + + ++GA ++ R + L++G + PT+ +V+
Sbjct: 314 TEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGY---FVEPTIFDDVDR 370
Query: 353 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 412
TM+++QEE FGP++ + +F+T+EE ++LAND+ YGL AV++ RA +A +++ G
Sbjct: 371 TMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTV 430
Query: 413 AINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPI 471
IND+ + P+GG K SG GR G GL K + I P+PI
Sbjct: 431 WINDY--HPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHI-------NINLS-PQPI 479
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 259 bits (663), Expect = 7e-81
Identities = 141/459 (30%), Positives = 223/459 (48%), Gaps = 22/459 (4%)
Query: 3 YLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRD 62
L PA S A+VD VA AR A W ++ +R + LR L + EH E + I + D
Sbjct: 9 VLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALD 68
Query: 63 TGKTMVDASLGEIMTTCEKITW---LLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVV 119
G + A LG++M + + L++E LK E G +H + P GVV
Sbjct: 69 CGNPVS-AMLGDVMVAAALLDYFAGLVTE----LKGETIPVGGRNLHYTLR---EPYGVV 120
Query: 120 GAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLV 179
IV++N+P + A + +GN +V+K E A S + + L P +
Sbjct: 121 ARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREVL-----PPGVF 175
Query: 180 DVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236
+++ G A G ALV V +I +GS GR IMR A++ + VTLELGGK+A IV
Sbjct: 176 NILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFP 235
Query: 237 DVDVPHVAQIAVRAA-LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 295
D D A AV GQ+C R +VH IY +++V + V ++ G P
Sbjct: 236 DADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPA 295
Query: 296 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMK 355
MG L + +++ + ++ A +GA ++ G Y PTV +V M+
Sbjct: 296 TTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMR 355
Query: 356 LMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 415
+ +EE FGP++ ++++ + E+V AN YGL A+++ +A A +++ G IN
Sbjct: 356 IAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWIN 415
Query: 416 DFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
+ +++ PFGGVK+SG GR +E L + K+V
Sbjct: 416 GSSRHFL--GAPFGGVKNSGIGREECLEELLSYTQEKNV 452
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 256 bits (656), Expect = 7e-81
Identities = 95/275 (34%), Positives = 137/275 (49%), Gaps = 11/275 (4%)
Query: 22 ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK 81
AR A K WA +R LR + + E +E + + + +TGK + +LGE+ +
Sbjct: 3 ARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIE-EALGEVARAIDT 61
Query: 82 ITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVF 141
+ +K PE S +A V PLGVVG I WN+P + A+
Sbjct: 62 FRYAAGLADKLGGPELPSPDP---GGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALA 118
Query: 142 SGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS--VDK 198
+GN +V+K SE + ++Q A G P +V+V+ G E G AL+S VDK
Sbjct: 119 AGNTVVLKPSELTPLTALALAELLQEA----GLPPGVVNVVPGGGDEVGAALLSHPRVDK 174
Query: 199 IIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQN 258
I F GS VG+ IM+ A++ L PVTLELGGK IV +D D+ + AV A ++GQ
Sbjct: 175 ISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQI 234
Query: 259 CAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 293
C A R VH IY FV ++ ++ V P+A
Sbjct: 235 CTAASRLLVHESIYDEFVEKLVTVLVDVDPDMPIA 269
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 259 bits (663), Expect = 1e-80
Identities = 136/454 (29%), Positives = 221/454 (48%), Gaps = 25/454 (5%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+G FP + ++VD V AR+A W K +R ++L + + + +E + + +R+
Sbjct: 28 VGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELARLVTREM 87
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 123
GK + + G++ + + EG + L E S + +K A P+GVV I
Sbjct: 88 GKPLAEG-RGDVQEAIDMAQYAAGEGRR-LFGETVPS--ELPNKDAMTRRQPIGVVALIT 143
Query: 124 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 183
WN+P + A+ GN +V K +E+ ++++ A G P +V+V+
Sbjct: 144 PWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACA---LKLVEL-FAEAGLPPGVVNVVH 199
Query: 184 GFAE-TGEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
G E GEALV VD + F GS VG I ++ V LE+GGK+ IV DD D+
Sbjct: 200 GRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKRVALEMGGKNPIIVMDDADL 259
Query: 241 PHVAQIAVRAALQSS----GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 296
+A+ AL S+ GQ C R VH +Y F+ + + K + G L +
Sbjct: 260 ----DLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEET 315
Query: 297 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVNHTM 354
DMG L EK+ N ++GA +L G L+ G ++ + PTV +V M
Sbjct: 316 DMGPLINEAQLEKVLNYNEIGKEEGATLLLGG--ERLTGGGYEKGYFVEPTVFTDVTPDM 373
Query: 355 KLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 414
++ QEE FGP++ +++ ++ EE +++AND+ YGL A+++ ++A ++ G+ +
Sbjct: 374 RIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYV 433
Query: 415 NDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRA 447
N LPFGGVK SG G R AG L A
Sbjct: 434 NAPTIGAEVH-LPFGGVKKSGNGHREAGTTALDA 466
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 259 bits (663), Expect = 3e-80
Identities = 141/450 (31%), Positives = 229/450 (50%), Gaps = 35/450 (7%)
Query: 8 PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
P + RAE ++ +A A A W+K + +R + LR II ++E + ++ + + GK +
Sbjct: 57 PCMGRAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKEDLAQLMTLEQGKPL 116
Query: 68 VDASLGEIMTTCEKITWLLSEGEKW---LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 124
+A +GE+ + + E ++ + P R ++ K+ P+GVVGAI
Sbjct: 117 KEA-IGEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQ------PVGVVGAITP 169
Query: 125 WNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA------VGAPENL 178
WN+P I + A+ +G +V+K SE + ALAA G P +
Sbjct: 170 WNFPLAMITRKVGPALAAGCTVVVKPSELTPLT----------ALAAAELALQAGIPPGV 219
Query: 179 VDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235
++V+ G A E G+AL++S V KI F GS VG+ +M A+ T+ V+LELGG FIV
Sbjct: 220 LNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAATVKRVSLELGGNAPFIVF 279
Query: 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 295
DD D+ + A+ + ++SGQ C A R V IY F +K V+ + G
Sbjct: 280 DDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEG 339
Query: 296 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMK 355
G L +K+++ V DA+ KGA++L G S G ++ PTV+ +V M
Sbjct: 340 VTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGK--RHSLGGT--FYEPTVLGDVTEDML 395
Query: 356 LMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 415
+ +EE FGP+ P+ +F T+EE + +AND+ GL +F+ RA ++ ++ G+ +N
Sbjct: 396 IFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVN 455
Query: 416 DFASNYMCQSLPFGGVKDSGFGRFAGVEGL 445
+ + + PFGGVK SG GR G+
Sbjct: 456 EGLIS--TEVAPFGGVKQSGLGREGSKYGI 483
|
Length = 498 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 257 bits (659), Expect = 3e-80
Identities = 137/466 (29%), Positives = 210/466 (45%), Gaps = 39/466 (8%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
SR + + +A A A WA ++ +R + L + + + + ++ +
Sbjct: 12 YARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEG 71
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKW---LKPEYRSSGR----SMIHKKAKVEFHPL 116
G T A E T E LL ++ E S SM + PL
Sbjct: 72 GSTYGKA-WFETTFTPE----LLRAAAGECRRVRGETLPSDSPGTVSMSVR------RPL 120
Query: 117 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 176
GVV I +NYP + A+ +GN +V+K SE G I++ A G P+
Sbjct: 121 GVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEA----GLPK 176
Query: 177 NLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 233
+ +V+TG AE G+ LV V + F GS VGR I A + L +TLELGGK+ I
Sbjct: 177 GVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLI 236
Query: 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 293
V D D+ + + A A GQ C A R V +Y FV + + G P
Sbjct: 237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRD 296
Query: 294 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT 353
+G L E+++ V DA+ KGA++L G +G ++ PTV+ +V
Sbjct: 297 PDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGK----YDGN---FYQPTVLTDVTPD 349
Query: 354 MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 413
M++ +EE FGP+ ++ EE ++LAND+ YGL A+ + RA ++A +++ G+
Sbjct: 350 MRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVH 409
Query: 414 INDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 459
IND + +PFGGVK SGFGR G + E +W
Sbjct: 410 IND-PTILDEAHVPFGGVKASGFGREGGEWSME------EFTELKW 448
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 257 bits (659), Expect = 3e-80
Identities = 134/440 (30%), Positives = 208/440 (47%), Gaps = 13/440 (2%)
Query: 9 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 68
A + +V+ +A AR+AQ WA S +R + LR I E E + ++ + DTGKT+
Sbjct: 31 AATPEDVERAIAAARRAQGEWAAMSPMERGRILRRAADLIRERNEELAKLETLDTGKTLQ 90
Query: 69 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 128
+ + ++ + + + L E G A PLGV I +WNYP
Sbjct: 91 ETIVADMDSGADVFEFFAGLAPA-LNGEIIPLG---GPSFAYTIREPLGVCVGIGAWNYP 146
Query: 129 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AE 187
+ A+ +GN +V K SEN + I++ A G P+ + +V+ G AE
Sbjct: 147 LQIASWKIAPALAAGNAMVFKPSENTPLTALKVAEIMEEA----GLPKGVFNVVQGDGAE 202
Query: 188 TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ 245
G LV+ V K+ F G G+ IM A+ L VT+ELGGK IV DD D+
Sbjct: 203 VGPLLVNHPDVAKVSFTGGVPTGKKIMAAAAGHLKHVTMELGGKSPLIVFDDADLESAVD 262
Query: 246 IAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 305
A+ S+GQ C+ R +VH+ I F++++ + + + G P +MG L
Sbjct: 263 GAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVERTERIKLGDPFDEATEMGPLISAA 322
Query: 306 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPI 365
H +K+ + + +GA + G + PTV + M +++EE FGP+
Sbjct: 323 HRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFFVEPTVFADCTDDMTIVREEIFGPV 382
Query: 366 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQS 425
M ++ F+ ++EV+ AND+ YGL VF+ RA +A Q++ G IN + N
Sbjct: 383 MTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRAHRVADQLEAGTVWINTY--NLYPAE 440
Query: 426 LPFGGVKDSGFGRFAGVEGL 445
PFGG K SG GR G L
Sbjct: 441 APFGGYKQSGIGRENGKAAL 460
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 256 bits (657), Expect = 6e-80
Identities = 149/468 (31%), Positives = 229/468 (48%), Gaps = 36/468 (7%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+G PA + +VD V AR+A W K++ +R ++LR + + + E +E + E+ +RD
Sbjct: 10 IGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDN 69
Query: 64 GKTMVDAS--LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK----KAKVEFHPLG 117
GK + +A+ + ++ E L+E + R++ KA+V P+G
Sbjct: 70 GKPLDEAAWDVDDVAGCFEYYA-DLAEQLD------AKAERAVPLPSEDFKARVRREPVG 122
Query: 118 VVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 174
VVG I WN+P P LAA G +V+K SE S + I A G
Sbjct: 123 VVGLITPWNFPLLMAAWKVAPALAA---GCTVVLKPSELTSLTELELAEIA----AEAGL 175
Query: 175 PENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 231
P +++V+TG E G L + +DKI F GS G +M+ A++ + PV+LELGGK
Sbjct: 176 PPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSP 235
Query: 232 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 291
IV DD D+ + A+ ++GQ C+ R VH I F+ ++A +++ G P
Sbjct: 236 IIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDP 295
Query: 292 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-GHLSEGAVDQYF-PPTVIVN 349
L +G L EK+ + + ++GA +L G HL +G YF PTV +
Sbjct: 296 LEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKG----YFIAPTVFAD 351
Query: 350 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 409
V ++ +EE FGP++ + F T++E + LANDS YGL AV S R +A ++
Sbjct: 352 VPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEA 411
Query: 410 GVAAINDFASN-YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456
G+ IN S Q P+GG K SG GR G GL VK +
Sbjct: 412 GIVWIN--CSQPCFPQ-APWGGYKRSGIGRELGEWGLDNYLEVKQITR 456
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 254 bits (651), Expect = 3e-79
Identities = 134/442 (30%), Positives = 208/442 (47%), Gaps = 17/442 (3%)
Query: 16 DERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 75
E VA+ R+ S + R+ L+ L + + E++E I D GK +A L EI
Sbjct: 1 AELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEI 60
Query: 76 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 135
+I L +KW+KP S + KA V PLGVV I WNYP P
Sbjct: 61 AVVLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAP 120
Query: 136 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS- 194
++ A+ +GN +V+K SE A + ++I V V+ G E AL++
Sbjct: 121 LIGAIAAGNTVVLKPSELAPATSALLAKLIPKYF-----DPEAVAVVEGGVEVATALLAE 175
Query: 195 SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 254
D I F GSP VG+++M A+K LTPVTLELGGK IV D ++ A+ +
Sbjct: 176 PFDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLN 235
Query: 255 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314
+GQ C + VH I + ++ K +K P D G + H ++L +L+
Sbjct: 236 AGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDPKESP-DYGRIINERHFDRLASLL 294
Query: 315 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 374
+D +++ G ++Y PT++ +V+ LMQEE FGPI+PI+ ++
Sbjct: 295 DDG-----KVVIGGQVD-----KEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDL 344
Query: 375 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDS 434
+E ++ N L +FS + + A+ G +ND + +LPFGGV +S
Sbjct: 345 DEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNS 404
Query: 435 GFGRFAGVEGLRACCLVKSVVE 456
G G + G G +KSV++
Sbjct: 405 GMGAYHGKAGFDTFSHLKSVLK 426
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 254 bits (650), Expect = 5e-79
Identities = 138/469 (29%), Positives = 214/469 (45%), Gaps = 48/469 (10%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+ P S A+VD VA A A W +++ +R + L L I E+ E + + SR+T
Sbjct: 10 IATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNT 69
Query: 64 GKTMVDASLGEIMTTCEKITWL---------LSEGEKWLKPEYRSSGRSMIHKKAKVEFH 114
GK + E+ + + + GE Y SMI ++
Sbjct: 70 GKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGE------YLPGHTSMIRRE------ 117
Query: 115 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 171
P+GVV I WNYP P LAA GN +V+K SE + ++ A LAA
Sbjct: 118 PIGVVAQIAPWNYPLMMAAWKIAPALAA---GNTVVLKPSETTPLTT-----LLLAELAA 169
Query: 172 VGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 228
P +V+V+ G G+ALV+ V + GS G+ + R A+ TL V LELGG
Sbjct: 170 EVLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGG 229
Query: 229 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 288
K IV DD D+ A ++GQ+C A R YVH +Y FV+ + + V ++
Sbjct: 230 KAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRV 289
Query: 289 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 348
G P +MG L E++ V + A +L G ++ PTV+
Sbjct: 290 GDPDDEDTEMGPLNSAAQRERVAGFV-ERAPAHARVLTGGR----RAEGPGYFYEPTVVA 344
Query: 349 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 408
V +++QEE FGP++ + F+ ++E ++LAND YGL +V++ RA ++A++
Sbjct: 345 GVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLD 404
Query: 409 CGVAAIND---FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
G +N A+ +P GG K SG+G+ + L +K V
Sbjct: 405 FGTVWVNTHIPLAAE-----MPHGGFKQSGYGKDLSIYALEDYTRIKHV 448
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 252 bits (647), Expect = 2e-78
Identities = 142/456 (31%), Positives = 221/456 (48%), Gaps = 41/456 (8%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+G P S +V++ +A A++ K +R + L + + E +E + +
Sbjct: 12 IGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEA 71
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE------YRSSGRSMIHKKAKVEFHPLG 117
GK + DA E+ E + L +E K L E + + P+G
Sbjct: 72 GKPIKDA-RKEVDRAIETLR-LSAEEAKRLAGETIPFDASPGGEGRIGFTIRE----PIG 125
Query: 118 VVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 173
VV AI +N+P H + P +AA GN +V+K + S ++ A G
Sbjct: 126 VVAAITPFNFPLNLVAHKV-GPAIAA---GNAVVLKPASQTPLSALKLAELLLEA----G 177
Query: 174 APENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 230
P+ ++V+TG ET G+ALV+ V I F GSP VG I R A L VTLELG
Sbjct: 178 LPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNA 235
Query: 231 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 290
A IV D D+ + V A ++GQ C +R +VH DIY F+ + K + G
Sbjct: 236 AVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGD 295
Query: 291 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 350
PL D+G + +E+++ V +A++ GA +L G +GA+ PTV+ +V
Sbjct: 296 PLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLT----GGKRDGAI---LEPTVLTDV 348
Query: 351 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 410
MK++ EE F P++ + F+T +E + +ANDS YGL VF+ +A + A +++ G
Sbjct: 349 PPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVG 408
Query: 411 VAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 446
IND +S + +P+GGVK+SG GR EG R
Sbjct: 409 GVMIND-SSTFRVDHMPYGGVKESGTGR----EGPR 439
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 253 bits (648), Expect = 2e-78
Identities = 141/452 (31%), Positives = 213/452 (47%), Gaps = 33/452 (7%)
Query: 2 KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
K L P + +VD V A +A K W K+S +R L + I E+ EL+ +
Sbjct: 27 KVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLAVAETL 86
Query: 62 DTGKTMVDASLGEIMTTCEKITWLLS--EGEKWLKPEYRSSGRSMIHKKA-KVEFH-PLG 117
D GK + + +I + + + S I + FH PLG
Sbjct: 87 DNGKPIRETLAADIPLAIDHFRYFAGVIRAQ--------EGSLSEIDEDTLSYHFHEPLG 138
Query: 118 VVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 174
VVG I+ WN+P P LAA GN +V+K + S +I L
Sbjct: 139 VVGQIIPWNFPLLMAAWKLAPALAA---GNTVVLKPASQTPLSILVLMELIGDLL----- 190
Query: 175 PENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 231
P+ +V+V+TGF +E G+ L S + K+ F GS VGR+IM+ A++ L PVTLELGGK
Sbjct: 191 PKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLIPVTLELGGKSP 250
Query: 232 FIVCDDVDVPHV-----AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 286
I DD A+ + G+ C R V IY F+ + + +++
Sbjct: 251 NIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAI 310
Query: 287 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 346
G PL + MGA + EK+ + V+ ++GAE+L G L ++ PT+
Sbjct: 311 KVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTL 370
Query: 347 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 406
I N+ M++ QEE FGP++ ++ F +EE + +AND+ YGLG V++ +RA +A
Sbjct: 371 IKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARG 430
Query: 407 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGR 438
IQ G +N + + PFGG K SG GR
Sbjct: 431 IQTGRVWVNCY--HQYPAHAPFGGYKKSGIGR 460
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 251 bits (643), Expect = 1e-77
Identities = 135/454 (29%), Positives = 211/454 (46%), Gaps = 27/454 (5%)
Query: 12 RAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 68
+A+VD+ V AR A K W +R + L L I + + + + D GK
Sbjct: 43 KADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPFS 102
Query: 69 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 128
+ L ++ + + + +K G + + + P+GV G I+ WN+P
Sbjct: 103 KSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHE----PVGVCGQIIPWNFP 158
Query: 129 FHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 185
P LA GN +V+K +E + + +I+ A G P +V+V+ G+
Sbjct: 159 LLMAAWKLAPALAC---GNTVVLKPAEQTPLTALYLASLIKEA----GFPPGVVNVVPGY 211
Query: 186 AETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVP 241
T A +SS +DK+ F GS VG++I + A K+ L VTLELGGK IV D D+
Sbjct: 212 GPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNIVFADADLD 271
Query: 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 301
+ + A A + GQ C R +V IY FV + + K G P K + G
Sbjct: 272 YAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQ 331
Query: 302 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 361
E +K+ L+ +GA++ G G + PTV +V M++ +EE
Sbjct: 332 IDEEQFKKILELIESGKKEGAKLECGGK----RHGDKGYFIQPTVFSDVTDDMRIAKEEI 387
Query: 362 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 421
FGP+ I KF T +EV++ AN++ YGL AVF+ +A + ++ G +N + +
Sbjct: 388 FGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCY-NVV 446
Query: 422 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
Q+ PFGG K SG GR G GL+ VK+V
Sbjct: 447 SPQA-PFGGYKMSGNGRELGEYGLQEYTEVKTVT 479
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 251 bits (643), Expect = 1e-77
Identities = 150/447 (33%), Positives = 235/447 (52%), Gaps = 28/447 (6%)
Query: 2 KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
+ L + A+VD V A++A K W K++ +R L + I E++EL+ + +
Sbjct: 27 ETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLAMVETL 86
Query: 62 DTGKTMVDASLGEIMTTCEKITWLLS--EGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVV 119
D GK + + +I + + E+ S++ ++ P+GVV
Sbjct: 87 DNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLRE------PIGVV 140
Query: 120 GAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 176
G I+ WN+PF P LAA GN +VIK S S S +IIQ L P+
Sbjct: 141 GQIIPWNFPFLMAAWKLAPALAA---GNTVVIKPSSTTSLSLLELAKIIQDVL-----PK 192
Query: 177 NLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 233
+V+++TG +++GE L++ +DK+ F GS VGR + A+K L P TLELGGK A I
Sbjct: 193 GVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLIPATLELGGKSANI 252
Query: 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 293
+ DD + + A L + GQ C R +V IY FV+++ + ++V G PL
Sbjct: 253 IFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLD 312
Query: 294 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVN 351
MGA + +K+ + V+ A ++GA+IL G L+E +D+ + PT+IVNV
Sbjct: 313 PDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGG--HRLTENGLDKGFFIEPTLIVNVT 370
Query: 352 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 411
+ M++ QEE FGP+ ++KF T++EV+ +ANDS YGLG VF+ +RA +A ++ G
Sbjct: 371 NDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGR 430
Query: 412 AAINDFASNYMCQSLPFGGVKDSGFGR 438
+N + N + PFGG K SG GR
Sbjct: 431 VWVNTY--NQIPAGAPFGGYKKSGIGR 455
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 247 bits (632), Expect = 2e-76
Identities = 138/436 (31%), Positives = 211/436 (48%), Gaps = 23/436 (5%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
A+VD A+A AQ+ WA + ++R LR + EH + I + R++G A
Sbjct: 11 DAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKA 70
Query: 71 --SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 128
+G + + L ++ + + P + GR + ++ PLGVVG I +N+P
Sbjct: 71 GFEVGAAIGELHEAAGLPTQPQGEILPS--APGRLSLARRV-----PLGVVGVISPFNFP 123
Query: 129 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 188
+ A+ GN +V+K SG +I G P ++ V+ G A+
Sbjct: 124 LILAMRSVAPALALGNAVVLKPDPRTPVSGGV---VIARLFEEAGLPAGVLHVLPGGADA 180
Query: 189 GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 246
GEALV V I F GS VGR + A + L V+LELGGK+A IV DD D+ A
Sbjct: 181 GEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAASN 240
Query: 247 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 306
A GQ C A R VH + + +++A K + G P G+ +G L
Sbjct: 241 GAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQ 300
Query: 307 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 366
+++ +V+D++ GA + A G++ +G ++ PTV+ V M EE FGP+
Sbjct: 301 LDRVHAIVDDSVAAGARLEAGGTY----DG---LFYRPTVLSGVKPGMPAFDEEIFGPVA 353
Query: 367 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 426
P+ F++DEE V LAND+ YGL + S RA +A +++ G+ IND N +
Sbjct: 354 PVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHN- 412
Query: 427 PFGGVKDSGFG-RFAG 441
PFGG+ SG G RF G
Sbjct: 413 PFGGMGASGNGSRFGG 428
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 247 bits (632), Expect = 4e-76
Identities = 144/439 (32%), Positives = 220/439 (50%), Gaps = 20/439 (4%)
Query: 7 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKT 66
PA S+ +VDE A AQK WA + ++R + L + + E ++ I E R++G T
Sbjct: 26 IPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIRESGST 85
Query: 67 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 126
+ A++ E + L+ E R + K+ +V PLGVVG I WN
Sbjct: 86 RIKANI-EWGAA---MAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWN 141
Query: 127 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF-RIIQAALAAVGAPENLVDVITG- 184
+P H + A+ GN +V+K + + +G +I + A G P+ +++V+ G
Sbjct: 142 FPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKIFEEA----GLPKGVLNVVVGA 197
Query: 185 FAETGEALVSS-VDKII-FVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 242
+E G+A V V ++I F GS VGR I A + L V LELGG + F+V +D D+
Sbjct: 198 GSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALELGGNNPFVVLEDADIDA 257
Query: 243 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 302
AV GQ C R VH D+Y FV + + VK++ G P +G L
Sbjct: 258 AVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLI 317
Query: 303 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAF 362
+ L + + A+++GA +L G A PTV+ +V + M++ +EE F
Sbjct: 318 NESQVDGLLDKIEQAVEEGATLLVGGE-------AEGNVLEPTVLSDVTNDMEIAREEIF 370
Query: 363 GPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 422
GP+ PI+K + +EE ++LAND+ YGL AVF+ R + A +I G+ IND N
Sbjct: 371 GPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDE 430
Query: 423 CQSLPFGGVKDSGFGRFAG 441
+PFGG K+SG GRF G
Sbjct: 431 -PHVPFGGEKNSGLGRFNG 448
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 247 bits (633), Expect = 6e-76
Identities = 158/474 (33%), Positives = 237/474 (50%), Gaps = 33/474 (6%)
Query: 4 LGYFPALSRAEVDERVAQARKA-----QKVWAKSSFKQRRQFLRILLKYIIEHQELICEI 58
+G PA + +VD V ARKA K WA+++ R ++LR + I E + + ++
Sbjct: 36 IGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKL 95
Query: 59 SSRDTGKTMVDASLGEI--MTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFH 114
+ D GK +D + ++ + C + L+E + + S M K V
Sbjct: 96 ETLDCGKP-LDEAAWDMDDVAGCFEYYADLAEALD----AKQKAPVSLPMETFKGYVLKE 150
Query: 115 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA-VG 173
PLGVVG I WNYP + A+ +G V+K SE AS + C A + VG
Sbjct: 151 PLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVT-CLEL----ADICREVG 205
Query: 174 APENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 230
P +++V+TG E G L S VDKI F GS GR IM A++ + PV+LELGGK
Sbjct: 206 LPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQMVKPVSLELGGKS 265
Query: 231 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 290
IV DDVD+ + A+ ++GQ C+ R VH I + F+ ++ K K++
Sbjct: 266 PIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISD 325
Query: 291 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-GHLSEGAVDQYFPPTVIVN 349
PL +G + EK+ ++ A +GA IL G HL +G + PT+I +
Sbjct: 326 PLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGF---FIEPTIITD 382
Query: 350 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 409
V +M++ +EE FGP++ + F+T++E ++LANDS YGL AV S R ++ Q
Sbjct: 383 VTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQA 442
Query: 410 GVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV----EDRW 459
G+ IN + CQ P+GG+K SGFGR G GL VK V ++ W
Sbjct: 443 GIVWIN-CSQPCFCQ-APWGGIKRSGFGRELGEWGLENYLSVKQVTKYISDEPW 494
|
Length = 503 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 243 bits (623), Expect = 5e-75
Identities = 145/451 (32%), Positives = 229/451 (50%), Gaps = 28/451 (6%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+G P E + + A +A K W ++ K+R LR ++E+++ + + + +
Sbjct: 10 IGSVPDQGVDETEAAIRAAYEAFKTWRATTAKERSSLLRKWYNLMMENKDDLARLITLEN 69
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM----IHKKAKVEFHPLGVV 119
GK + +A GEI+ + W E + R G ++ K+ V P+GV
Sbjct: 70 GKPLKEAK-GEILYAASFLEWFAEEAK-------RVYGDTIPSPQSDKRLIVIKQPVGVC 121
Query: 120 GAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLV 179
AI WN+P I AA+ +G +V+K +E S R+ + A G P+ ++
Sbjct: 122 AAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQA----GIPKGVL 177
Query: 180 DVITGFA--ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235
+VITG E G L +S V KI F GS VG+++M+ ++ T+ V++ELGG FIV
Sbjct: 178 NVITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVF 237
Query: 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 295
DD D+ + A+ + +++GQ C A R YVH IY F ++A+ VK + G L
Sbjct: 238 DDADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEG 297
Query: 296 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMK 355
G L + EK++ + DA++KGA+++ G H G +F PTV+ NV M
Sbjct: 298 VTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKR-HELGG---NFFEPTVLSNVTADML 353
Query: 356 LMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 415
+ +EE FGP+ P+ KF+ +EEV+ +AND+ GL FS R +A ++ G+ IN
Sbjct: 354 VSKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGIN 413
Query: 416 D-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 445
SN + PFGGVK SG GR G+
Sbjct: 414 TGLISNVVA---PFGGVKQSGLGREGSKYGI 441
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 242 bits (619), Expect = 5e-74
Identities = 140/460 (30%), Positives = 221/460 (48%), Gaps = 40/460 (8%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK---YIIEHQELICEISSRDTGKTM 67
+ A+V+ VA A++ QK+WA + +R RIL + + E + + + + DTGK +
Sbjct: 42 TPADVEAAVASAKQGQKIWAAMTAMERS---RILRRAVDILRERNDELAALETLDTGKPI 98
Query: 68 VDASLGEIMTTCEKITWLLS-----EGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAI 122
+ S+ +I+T + + + EGE + G S ++ + + PLGV I
Sbjct: 99 QETSVVDIVTGADVLEYYAGLAPALEGE-----QIPLRGGSFVYTRRE----PLGVCAGI 149
Query: 123 VSWNYPFHNIF----NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENL 178
+WNYP I P LAA GN ++ K SE + I A G P+ +
Sbjct: 150 GAWNYPIQ-IACWKSAPALAA---GNAMIFKPSEVTPLTALKLAEIYTEA----GLPDGV 201
Query: 179 VDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236
+V+ G G L + K+ F G G+ +M A+ +L VT+ELGGK IV D
Sbjct: 202 FNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASLKEVTMELGGKSPLIVFD 261
Query: 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 296
D D+ A IA+ A SSGQ C R +V + I A F +++ + V+ + G P+
Sbjct: 262 DADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPAT 321
Query: 297 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVNHTM 354
+ G L H +K+ + +GA +L G L+EG + PTV + M
Sbjct: 322 NFGPLVSFAHRDKVLGYIEKGKAEGARLLCGG--ERLTEGGFANGAFVAPTVFTDCTDDM 379
Query: 355 KLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 414
+++EE FGP+M ++ F+ ++EV+ AND+ YGL VF+ RA + Q++ G+ I
Sbjct: 380 TIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWI 439
Query: 415 NDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
N +P GG K SG GR G+ L +KSV
Sbjct: 440 N--TWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSV 477
|
Length = 488 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 240 bits (614), Expect = 1e-73
Identities = 144/462 (31%), Positives = 221/462 (47%), Gaps = 40/462 (8%)
Query: 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISS 60
+ +G P A+VD VA A+ A WA + ++R + L + + E + + +
Sbjct: 7 GQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLA 66
Query: 61 RDTGKTMVDASLGEIMTTCEKITW---LLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 117
+TG + + E + + L E LK E G ++ + PLG
Sbjct: 67 LETGNALRTQARPEAAVLADLFRYFGGLAGE----LKGETLPFGPDVLTYTVRE---PLG 119
Query: 118 VVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 177
VVGAI+ WN P + A+ +GN +V+K +E+A + I+ L P
Sbjct: 120 VVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQVL-----PAG 174
Query: 178 LVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 234
+++VITG+ E G ALV VDK+ F GS VG++I R A+ L PV+LELGGK IV
Sbjct: 175 VLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIV 234
Query: 235 CDDVDVPHVAQIAV---RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 291
D D+ A+ R Q GQ+C R +VH DIY F+ ++ + + G P
Sbjct: 235 FPDADLDDAVDGAIAGMRFTRQ--GQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDP 292
Query: 292 LAGKYDMGALCLLEHSEKLQNLVNDALD-----KGAEILARGSF---GHLSEGAVDQYFP 343
L D+GA+ SEK V +D GA +L G G L++G +
Sbjct: 293 LDEATDIGAII----SEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGF---FVQ 345
Query: 344 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 403
PT+ V++ +L +EE FGP++ + + ++EV+ +ANDS YGL V++ RA
Sbjct: 346 PTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRA 405
Query: 404 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 445
A ++ G +N QS +GG K SG GR A +EG+
Sbjct: 406 AHALEAGWVQVNQGGGQQPGQS--YGGFKQSGLGREASLEGM 445
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 238 bits (610), Expect = 8e-73
Identities = 135/467 (28%), Positives = 218/467 (46%), Gaps = 56/467 (11%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
S A+VD VA A A W++++ K+R + L L I E+ + + S + GK + A
Sbjct: 37 SAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEFARLESLNCGKPLHLA 96
Query: 71 SLGEIMTTCEKITWL---------LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGA 121
EI + + + GE Y SMI + P+GVV +
Sbjct: 97 LNDEIPAIVDVFRFFAGAARCLEGKAAGE------YLEGHTSMIRRD------PVGVVAS 144
Query: 122 IVSWNYPFHNIFNPMLA------AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 175
I WNYP M+A A+ +GN +V+K SE + A LAA P
Sbjct: 145 IAPWNYPL------MMAAWKLAPALAAGNTVVLKPSEITPLT-ALKL----AELAADILP 193
Query: 176 ENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 232
+++V+TG A G+ALV V + GS G+ ++ A+ ++ LELGGK
Sbjct: 194 PGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADSVKRTHLELGGKAPV 253
Query: 233 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 292
IV DD D+ V + ++GQ+C A R Y R IY V+++A V ++ G P
Sbjct: 254 IVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPD 313
Query: 293 AGKYDMGALCLLEHSEKLQNLVNDALDKG-AEILARGSFGHLSEGAVDQ---YFPPTVIV 348
++G L H +++ V A G ++ G A D Y+ PT++
Sbjct: 314 DEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGE-------APDGKGYYYEPTLLA 366
Query: 349 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 408
+++Q E FGP++ + F+ +++ V+ ANDS YGL +V++ RA ++A++Q
Sbjct: 367 GARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQ 426
Query: 409 CGVAAINDFASNYMCQS-LPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
G +N ++M S +P GG K SG+G+ + GL +V+ V
Sbjct: 427 YGCTWVNT---HFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHV 470
|
Length = 475 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 238 bits (608), Expect = 1e-72
Identities = 147/454 (32%), Positives = 224/454 (49%), Gaps = 30/454 (6%)
Query: 13 AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKY---IIEHQELICEISSRDTGKTM 67
+VD V ARKA + W + + +R RILL++ + +H + + + + D GK
Sbjct: 41 EDVDRAVKAARKAFDEGPWPRMTGYERS---RILLRFADLLEKHADELAALETWDNGKPY 97
Query: 68 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH-PLGVVGAIVSWN 126
A E+ + +K + G ++ H P+GVVG I+ WN
Sbjct: 98 EQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYT-----LHEPIGVVGQIIPWN 152
Query: 127 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA-VGAPENLVDVITGF 185
+P + A+ GN IV+K +E S A LAA G P+ +++++TGF
Sbjct: 153 FPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLA-----AKLAAEAGLPDGVLNIVTGF 207
Query: 186 AETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVP 241
T A ++S VDK+ F GS VG++IM+ A+K+ L PVTLELGGK FIVC+D DV
Sbjct: 208 GPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVD 267
Query: 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 301
++A A + GQ C R +VH IY FV + G P + G
Sbjct: 268 KAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQ 327
Query: 302 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 361
E EK+ + + ++GA ++ G G+ Y PT+ +V MK+ ++E
Sbjct: 328 VDKEQFEKILSYIEHGKEEGATLITGGD----RIGSKGYYIQPTIFSDVKDDMKIARDEI 383
Query: 362 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 421
FGP+ I+KF T +EV+K AN+S+YGL VFS + A ++ ++ G +N + +
Sbjct: 384 FGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCY--DV 441
Query: 422 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
S+PFGG K SG GR G+ L VK+VV
Sbjct: 442 FDASIPFGGYKMSGIGREKGIYALNNYLQVKAVV 475
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 236 bits (604), Expect = 3e-72
Identities = 130/467 (27%), Positives = 218/467 (46%), Gaps = 43/467 (9%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK---YIIEHQELICEISS 60
+G PA + + E +A A + S R Q IL K + +E + +
Sbjct: 12 VGTVPAGTEEALREALALAA------SYRSTLTRYQRSAILNKAAALLEARREEFARLIT 65
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM-----IHKKAKVEF-- 113
++G + D E+ + + + +E R G S + KA+ F
Sbjct: 66 LESGLCLKDT-RYEVGRAADVLRFAAAEAL-------RDDGESFSCDLTANGKARKIFTL 117
Query: 114 -HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 172
PLGVV AI +N+P + + + + A+ + N IV+K SE S Y + L
Sbjct: 118 REPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLS-AIYLADL---LYEA 173
Query: 173 GAPENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 229
G P +++ V+TG E G+ L++ VD + F G VG+ I A+ LELGG
Sbjct: 174 GLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIA--ATAGYKRQLLELGGN 231
Query: 230 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 289
D IV DD D+ A +AV + +SGQ C +R VH + FV + + ++ G
Sbjct: 232 DPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVG 291
Query: 290 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 349
P+ DMG + E + +++N V +A+ +GA +L G+ +GA+ + PTV+ +
Sbjct: 292 DPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVL----LGNQRQGAL---YAPTVLDH 344
Query: 350 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 409
V +L+ EE FGP+ P+++ +E + ++N + YGL V + + + ++
Sbjct: 345 VPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDV 404
Query: 410 GVAAINDFASNYMCQSLPFGGVKDSGFGRFAGV-EGLRACCLVKSVV 455
G +N+ + + PFGGVKDSG G GV E ++ VK+
Sbjct: 405 GTVNVNE-VPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 236 bits (604), Expect = 7e-72
Identities = 126/462 (27%), Positives = 207/462 (44%), Gaps = 51/462 (11%)
Query: 10 LSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVD 69
S +V+ VA AR+A K W K +R + +R + + + + +E + + S + GK + +
Sbjct: 32 ASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGRLVSLEMGKILPE 91
Query: 70 ASLGEI---MTTCEKITWLLSEGEKWLKPEYRSSGRSM----IH-----KKAKVEFHPLG 117
LGE+ + C+ L R + I + +++PLG
Sbjct: 92 G-LGEVQEMIDICDYAVGL---------------SRMLYGLTIPSERPGHRLMEQWNPLG 135
Query: 118 VVGAIVSWNYPFHNIF--NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 175
VVG I ++N+P + N +A V GN +V K SE + +I+ L G P
Sbjct: 136 VVGVITAFNFPV-AVPGWNAAIALV-CGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLP 193
Query: 176 ENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 233
+V+++TG + GE LV V + F GS VGR + ++ V LELGG +A I
Sbjct: 194 PGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFGRVLLELGGNNAII 253
Query: 234 VCDDVDVPHVAQIAVRAALQSS----GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 289
V DD D+ +AVRA L ++ GQ C R VH +Y F+ ++ K K V G
Sbjct: 254 VMDDADL----DLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIG 309
Query: 290 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG-HLSEGAVDQYF-PPTVI 347
PL +G L ++ +A++ G +G + PT++
Sbjct: 310 DPLDEGTLVGPL----INQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIV 365
Query: 348 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI--AA 405
V +++QEE F PI+ ++KF++ EE + + ND GL ++F+ A
Sbjct: 366 TGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPK 425
Query: 406 QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 447
CG+ +N S FGG K++G GR +G + +
Sbjct: 426 GSDCGIVNVNIPTSGAEIG-GAFGGEKETGGGRESGSDAWKQ 466
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 234 bits (598), Expect = 2e-71
Identities = 123/438 (28%), Positives = 199/438 (45%), Gaps = 18/438 (4%)
Query: 13 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 72
E+D ++ R + + R L+ L + +++E I E +D G+ + L
Sbjct: 5 DEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLL 64
Query: 73 GEIMTTCEKITWLLSEGEKWLKPEYRSSG--RSMIHKKAKVEFHPLGVVGAIVSWNYPFH 130
E+ I +L +KW K E G M K ++ PLGVV I WNYP
Sbjct: 65 TEVSGVKNDILHMLKNLKKWAKDEKVKDGPLAFMFGK-PRIRKEPLGVVLIIGPWNYPVL 123
Query: 131 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG-FAETG 189
+P++ A+ +G +V+K SE + ++ L + V+ G ET
Sbjct: 124 LALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKYL-----DPDAFQVVQGGVPETT 178
Query: 190 EALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR 249
L DKI + GS VGR+I A+K LTPVTLELGGK IV + D+ A+ +
Sbjct: 179 ALLEQKFDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILW 238
Query: 250 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 309
++GQ C + V +Y FV ++ K++ G A D + H +
Sbjct: 239 GKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGANASP-DYTRIVNPRHFNR 297
Query: 310 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 369
L++L++ KG +++ G ++ PPT++ +V+ LM EE FGP++PI+
Sbjct: 298 LKSLLDTT--KG-KVVIGGEMD-----EATRFIPPTIVSDVSWDDSLMSEELFGPVLPII 349
Query: 370 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFG 429
K + +E +K+ N L +F+ + I + + G IND + + PFG
Sbjct: 350 KVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFG 409
Query: 430 GVKDSGFGRFAGVEGLRA 447
GV DSG+G + G G
Sbjct: 410 GVGDSGYGAYHGKYGFDT 427
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 233 bits (596), Expect = 5e-71
Identities = 129/453 (28%), Positives = 216/453 (47%), Gaps = 31/453 (6%)
Query: 2 KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
+ +G PA RA+ +E +A AR + +R L + + E +I +
Sbjct: 10 EVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIAC 69
Query: 62 DTGKTMVDASLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGRSMIHKKAKVEFHPL 116
+ GK + DA E+ + + E GE+ + S + + P+
Sbjct: 70 EGGKPIKDA-RVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIRE----PV 124
Query: 117 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 176
GVV AI +N+P + + + + A+ +G +V+K + S +I+ A G PE
Sbjct: 125 GVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEA----GVPE 180
Query: 177 NLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 233
++ V+TG G+A + V + F GS VG + NA + LELGG I
Sbjct: 181 GVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANAGGK--RIALELGGNAPVI 238
Query: 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 293
V D D+ + + +GQ C +R YVH ++Y F+ VK + G PL
Sbjct: 239 VDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLD 298
Query: 294 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT 353
D+G L E +E+++ V +A++ GA +L G +GA+ F PTV+ +V
Sbjct: 299 EDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGE----RDGAL---FKPTVLEDVPRD 351
Query: 354 MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 413
KL EE FGP++PI++++ EE +++AN + YGL +F+ + A + A +++ G
Sbjct: 352 TKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVM 411
Query: 414 INDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 446
+ND +S + +PFGGVK+SG GR EG+
Sbjct: 412 VND-SSAFRTDWMPFGGVKESGVGR----EGVP 439
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 232 bits (594), Expect = 1e-70
Identities = 136/454 (29%), Positives = 206/454 (45%), Gaps = 31/454 (6%)
Query: 4 LGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
+G + AE + +A AR+A WA + R + L L + E + + +
Sbjct: 10 IGTYADGGVAEAEAAIAAARRAFDETDWAHDP-RLRARVLLELADAFEANAERLARLLAL 68
Query: 62 DTGKTMVDASLGEIMTTCEKITWL--LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVV 119
+ GK + +A EI ++ + L+ E E S++ ++ P+GV
Sbjct: 69 ENGKILGEAR-FEISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLRE------PMGVA 121
Query: 120 GAIVSWNYP---FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 176
G IV WN P P LAA G +V+K A + II+ P
Sbjct: 122 GIIVPWNSPVVLLVRSLAPALAA---GCTVVVKP---AGQTAQINAAIIRILAEIPSLPA 175
Query: 177 NLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 233
+V++ T +E LV+S VD I F GS GR IM A+ TL + LELGGK I
Sbjct: 176 GVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCI 235
Query: 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 293
V DD D+ RA +GQ C R V R I ++A + +V GP L
Sbjct: 236 VFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLD 295
Query: 294 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG--SFGHLSEGAVDQYFPPTVIVNVN 351
DMG L + +++ +V A+ GAE++ RG L++GA + PT++ +
Sbjct: 296 PASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGA---FLRPTLLEVDD 352
Query: 352 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 411
++QEE FGP++ + F+ + E V LAND+ YGL +V++ RA +A I+ G
Sbjct: 353 PDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGT 412
Query: 412 AAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 445
IND+ + GG + SG GR GV L
Sbjct: 413 VWINDWNKLF--AEAEEGGYRQSGLGRLHGVAAL 444
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 229 bits (586), Expect = 2e-69
Identities = 133/441 (30%), Positives = 211/441 (47%), Gaps = 34/441 (7%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
+VD VA AR A + W+ R + L + ++I +HQ L + S D GK + ++
Sbjct: 57 EEEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQRLFAVLESLDNGKPIRES 116
Query: 71 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 130
+I Y +G + + + P+GVVG IV WN+P
Sbjct: 117 RDCDIPLVARHF--------------YHHAGWAQLLDTELAGWKPVGVVGQIVPWNFPLL 162
Query: 131 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGE 190
+ + A+ GN +V+K +E + + I A G P +++++TG G
Sbjct: 163 MLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEA----GLPPGVLNIVTGNGSFGS 218
Query: 191 ALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 248
AL + VDK+ F GS VGR + R + T ++LELGGK FIV DD D+ + V
Sbjct: 219 ALANHPGVDKVAFTGSTEVGRALRRATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIV 278
Query: 249 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 308
A + GQ C R V + + ++ + + + G PL DMGA+ +
Sbjct: 279 DAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLK 338
Query: 309 KLQNLVNDALDKGAEILARG----SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 364
+++ LV + +GA++ G S G ++PPT+ NV ++ QEE FGP
Sbjct: 339 RIRELVEEGRAEGADVFQPGADLPSKGP--------FYPPTLFTNVPPASRIAQEEIFGP 390
Query: 365 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQ 424
++ ++ F T +E V LAN++ YGL +V+S + A E+A ++ GV IN N
Sbjct: 391 VLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWIN--GHNLFDA 448
Query: 425 SLPFGGVKDSGFGRFAGVEGL 445
+ FGG ++SGFGR G EGL
Sbjct: 449 AAGFGGYRESGFGREGGKEGL 469
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 224 bits (573), Expect = 1e-67
Identities = 138/453 (30%), Positives = 218/453 (48%), Gaps = 18/453 (3%)
Query: 7 FPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG 64
+ + +VD VA ARKA + W + S +R L + I +E + I + ++G
Sbjct: 13 YAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESG 72
Query: 65 KTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 124
K + + GEI + + S Y + G M+ V P+GVVG I
Sbjct: 73 KP-ISQARGEIEGAADLWRYAASLARTLHGDSYNNLGDDML---GLVLREPIGVVGIITP 128
Query: 125 WNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 184
WN+PF + + A+ +G +V+K SE S + + + + A G P +V+++TG
Sbjct: 129 WNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTT---LMLAELLIEA-GLPAGVVNIVTG 184
Query: 185 F-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVP 241
+ A G+A+ VD + F GS VG+ I A++ L V+LELGGK+ IV D D+
Sbjct: 185 YGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFADADLD 244
Query: 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 301
A V ++G+ C R VH I FV+ V + V G PL + +GA+
Sbjct: 245 AAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAI 304
Query: 302 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 361
K+ + V+ +GA +L G L+ A ++ PT+ +V M + +EE
Sbjct: 305 INEAQLAKITDYVDAGRAEGATLLLGG--ERLASAA-GLFYQPTIFTDVTPDMAIAREEI 361
Query: 362 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 421
FGP++ ++ F+T +E + LAND+ YGL V+S A +A +I+ G +N F
Sbjct: 362 FGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGS 421
Query: 422 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
LPFGG K SG GR G G+ +K+V
Sbjct: 422 --PELPFGGFKQSGIGRELGRYGVEEYTELKTV 452
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 223 bits (571), Expect = 5e-67
Identities = 139/449 (30%), Positives = 212/449 (47%), Gaps = 22/449 (4%)
Query: 13 AEVDERVAQARKA-QKVWAKS-SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
A+VD V A A + W S +R + L L + + + + I + D GKT A
Sbjct: 44 ADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTA 103
Query: 71 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 130
++ + + + W + + I K P+GV G I+ WN+P
Sbjct: 104 KRVDVQASADTFRYYGG----WADKIHGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLL 159
Query: 131 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGE 190
+ A+ +GN IV+K SE S + ++I A G P +++V++G+ T
Sbjct: 160 MCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEA----GFPPGVINVVSGYGRTCG 215
Query: 191 ALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQI 246
+SS +DK+ F GS VGR +M A+K+ L VTLELGGK IV DD D+
Sbjct: 216 NAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVW 275
Query: 247 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 306
+ GQ C R YV IY FV + + K + G P A G
Sbjct: 276 TAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQ 335
Query: 307 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPI 365
E++ + + +GA + G H +EG YF PT+ +V MK+++EE FGP+
Sbjct: 336 YERIMSYIESGKAEGAT-VETGGKRHGNEG----YFIEPTIFTDVTEDMKIVKEEIFGPV 390
Query: 366 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQS 425
+ ++KF T+EE +K ANDS YGL AVF+ + + A +A ++ G +N + N +
Sbjct: 391 VAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCY--NLLHHQ 448
Query: 426 LPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
+PFGG K SG GR G L +K+V
Sbjct: 449 VPFGGYKQSGIGRELGEYALENYTQIKAV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 222 bits (568), Expect = 1e-66
Identities = 124/445 (27%), Positives = 204/445 (45%), Gaps = 30/445 (6%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+G + S + D +A A A W ++S + R L + +E + + +R+
Sbjct: 28 VGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELARLLTREE 87
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM--IHKKAKVEFH--PLGVV 119
GKT+ +A GE+ + + E R SG ++ +VE PLGVV
Sbjct: 88 GKTLPEA-RGEVTRAGQIFRYYAGEA-------LRLSGETLPSTRPGVEVETTREPLGVV 139
Query: 120 GAIVSWNYPFHNI----FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 175
G I WN+P I P LA GN +V K +E S + +++ L G P
Sbjct: 140 GLITPWNFPI-AIPAWKIAPALAY---GNTVVFKPAELTPASA---WALVEI-LEEAGLP 191
Query: 176 ENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 232
+ +++ G +E G+ALV VD + F GS VGR I A+ V LE+GGK+
Sbjct: 192 AGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGARVQLEMGGKNPL 251
Query: 233 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 292
+V DD D+ + AV+ A S+GQ C + R V I+ FV + + K++ G L
Sbjct: 252 VVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDAL 311
Query: 293 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 352
D+G + EK + A +GA+++ G L Y P + V +
Sbjct: 312 DEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGG--ERLKRPDEGYYLAPALFAGVTN 369
Query: 353 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 412
M++ +EE FGP+ +++ +E + +AND+ +GL + + S A +++ GV
Sbjct: 370 DMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVV 429
Query: 413 AINDFASNYMCQSLPFGGVKDSGFG 437
+N + + +PFGG K S +G
Sbjct: 430 MVN-LPTAGVDYHVPFGGRKGSSYG 453
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 222 bits (568), Expect = 2e-66
Identities = 130/445 (29%), Positives = 206/445 (46%), Gaps = 25/445 (5%)
Query: 33 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW 92
+ R+Q LR LL+ + E+++ E +D G+ + + E++ T +I LL +++
Sbjct: 27 PLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKHLDEY 86
Query: 93 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 152
LKPE + K+ + PLGVV I +WNYP + P+ A+ +GN +V+K SE
Sbjct: 87 LKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSE 146
Query: 153 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVSSVDKIIFVGSPGVGRMI 211
+ + +++ L + V VI G E T E L D I F GSP VG+++
Sbjct: 147 LSPHTSKLMAKLLTKYL-----DPSYVRVIEGGVEVTTELLKEPFDHIFFTGSPRVGKLV 201
Query: 212 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 271
M+ A++ LTP TLELGGK IV ++ A+ ++GQ C + VHR I
Sbjct: 202 MQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSI 261
Query: 272 YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 331
F+ + + +K G D + H+++L L+ D G +++ G
Sbjct: 262 KDKFIEALKEAIKEF-FGEDPKKSEDYSRIVNEFHTKRLAELIKD---HGGKVVYGGEVD 317
Query: 332 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 391
++Y PT+IVN + LMQEE FGPI+PI+ + +EV++ N L
Sbjct: 318 -----IENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALY 372
Query: 392 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 451
F + + G IND + + +LPFGGV +SG G + G G
Sbjct: 373 YFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHP 432
Query: 452 KSVVED----------RWWPYIKTK 466
K V+ R+ PY K
Sbjct: 433 KPVLNKSTGNSFDLSLRYPPYTSFK 457
|
Length = 493 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 220 bits (562), Expect = 5e-66
Identities = 126/447 (28%), Positives = 210/447 (46%), Gaps = 31/447 (6%)
Query: 33 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW 92
+ R + L+ L + I +++ I E +D GK+ +A + EI +I + + +KW
Sbjct: 18 DVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKW 77
Query: 93 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 152
+KP+ + K+ + + P GVV I WNYPF P++ A+ +GN V+K SE
Sbjct: 78 MKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSE 137
Query: 153 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS-VDKIIFVGSPGVGRMI 211
+ +II+ E V V+ G E + L+ D I F GS VG+++
Sbjct: 138 LTPNTSKVIAKIIEETF-----DEEYVAVVEGGVEENQELLDQKFDYIFFTGSVRVGKIV 192
Query: 212 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 271
M A+K LTPVTLELGGK IV +D ++ A+ V ++GQ C + VH +
Sbjct: 193 MEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESV 252
Query: 272 YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 331
F+ ++ + +K PL D G + +H ++L L+ +I+ G+
Sbjct: 253 KEKFIKELKEEIKKFYGEDPLESP-DYGRIINEKHFDRLAGLL-----DNGKIVFGGNTD 306
Query: 332 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 391
Y PT++ NV +MQEE FGPI+P++ ++T +E +++ L
Sbjct: 307 RE-----TLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALY 361
Query: 392 VFSGSQHRAREIAAQIQCGVAAIND----FASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 447
+FS + +++ + G IND A+ Y+ PFGGV +SG G + G
Sbjct: 362 LFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYL----PFGGVGNSGMGSYHGKYSFDT 417
Query: 448 CCLVKSVVEDRWWPYIKTKIPKPIQYP 474
KS+++ T P++YP
Sbjct: 418 FSHKKSILKK------STWFDLPLRYP 438
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 220 bits (563), Expect = 5e-66
Identities = 137/458 (29%), Positives = 222/458 (48%), Gaps = 33/458 (7%)
Query: 11 SRAEVDERVAQARKAQKV-WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVD 69
+ A+VD VA A +A WAK++ +R + L L I +H E + ++ + +GK++
Sbjct: 35 TEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELAQLETLCSGKSI-- 92
Query: 70 ASLGEIMTTCEKITWLLS--------EGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGA 121
L + +L GE L P S A P+GVV
Sbjct: 93 -HLSRAFEVGQSANFLRYFAGWATKINGET-LAPSIPSMQGE--RYTAFTRREPVGVVAG 148
Query: 122 IVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 181
IV WN+ + AA+ +G IVIK SE + R+ + A A G P+ +++V
Sbjct: 149 IVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLT---LLRVAELAKEA-GIPDGVLNV 204
Query: 182 ITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVD 239
+ G G L+S V K+ F GS G+ I R A+ LT VTLELGGK+A D D
Sbjct: 205 VNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGRQAASDLTRVTLELGGKNAAAFLKDAD 264
Query: 240 VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMG 299
+ V + + A GQ CA ERFYVHR + V+++ + + S G P+ G
Sbjct: 265 IDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDESVMFG 324
Query: 300 ALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ---YFPPTVIVNVNHTMKL 356
L H +K+ + ++DA +G EI+ G A+ + PT+++ + +L
Sbjct: 325 PLANQPHFDKVCSYLDDARAEGDEIVRGG-------EALAGEGYFVQPTLVLARSADSRL 377
Query: 357 MQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 416
M+EE FGP++ + + +EE+++L ND+ +GL +V++ + +A +I+ G +N
Sbjct: 378 MREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVN- 436
Query: 417 FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
++ ++PFGG+K SG GR G + +KSV
Sbjct: 437 -MHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSV 473
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 220 bits (562), Expect = 2e-65
Identities = 145/463 (31%), Positives = 220/463 (47%), Gaps = 46/463 (9%)
Query: 12 RAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKY---IIEHQELICEISSRDTGKT 66
+ +VD V AR+A W + S +R RI++K+ I EH E + + + D GK
Sbjct: 57 KEDVDLAVKAAREAFDHGPWPRMSGFERG---RIMMKFADLIEEHIEELAALDTIDAGKL 113
Query: 67 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK---KAKVEFH------PLG 117
+I + + +K IH K + P+G
Sbjct: 114 FALGKAVDIPAAAGLLRYYAGAADK-------------IHGETLKMSRQLQGYTLKEPIG 160
Query: 118 VVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 177
VVG I+ WN+P F + A+ +G +V+K +E S FY + + A G P+
Sbjct: 161 VVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLA----GVPDG 216
Query: 178 LVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFI 233
+++V+TGF T A ++S VDK+ F GS VGR IM+ A+ + L V+LELGGK +
Sbjct: 217 VINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLL 276
Query: 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 293
+ DD DV +A+ + G+ C + R YV IY FV ++ + K G P
Sbjct: 277 IFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFD 336
Query: 294 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT 353
+ G + EK+ + + +GA +L G G Y PT+ +V
Sbjct: 337 PRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGK----PCGDKGYYIEPTIFTDVTED 392
Query: 354 MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 413
MK+ Q+E FGP+M +MKF T EE +K AN+++YGL + + A ++ I+ G
Sbjct: 393 MKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIW 452
Query: 414 IN-DFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
+N FA + C PFGG K SGFGR G++ L VKSVV
Sbjct: 453 VNCYFAFDPDC---PFGGYKMSGFGRDQGMDALDKYLQVKSVV 492
|
Length = 501 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 215 bits (551), Expect = 2e-64
Identities = 130/449 (28%), Positives = 209/449 (46%), Gaps = 42/449 (9%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
+++E +A A KA + +R L + + E E + E + GK + DA
Sbjct: 19 GPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDA 78
Query: 71 SLGEIMTTCEKITWLLSE-----GEKWLKPEY--RSSGRSMIHKKAKVEFHPLGVVGAIV 123
GE+ + E GE L + R GR + ++ P+G V AI
Sbjct: 79 R-GEVARAIDTFRIAAEEATRIYGE-VLPLDISARGEGRQGLVRRF-----PIGPVSAIT 131
Query: 124 SWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLV 179
+N+P H + P +AA G V+K + S I+ LA G P+
Sbjct: 132 PFNFPLNLVAHKV-APAIAA---GCPFVLKPASRTPLSAL----ILGEVLAETGLPKGAF 183
Query: 180 DVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237
V+ + + LV+ + + F GSP VG + A K V LELGG A IV D
Sbjct: 184 SVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGKK--KVVLELGGNAAVIVDSD 241
Query: 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD 297
D+ AQ + A +GQ+C +R VHR +Y F S++ VK++ G P D
Sbjct: 242 ADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATD 301
Query: 298 MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLM 357
+G + +E+++ VN+A+D GA++L G +GA+ PT++ +V M++
Sbjct: 302 VGPMISESEAERVEGWVNEAVDAGAKLLTGGK----RDGAL---LEPTILEDVPPDMEVN 354
Query: 358 QEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 417
EE FGP++ + ++ +E + NDS++GL VF+ +A +++ G IND
Sbjct: 355 CEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDV 414
Query: 418 ASNYMCQSLPFGGVKDSGFGRFAGVEGLR 446
+ + +P+GGVKDSG GR EG+R
Sbjct: 415 PT-FRVDHMPYGGVKDSGIGR----EGVR 438
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 214 bits (546), Expect = 3e-64
Identities = 130/418 (31%), Positives = 203/418 (48%), Gaps = 36/418 (8%)
Query: 41 LRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKWLKP 95
LR + I E I + + GK A + E+ T + I ++ EGE +
Sbjct: 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGE--IIQ 57
Query: 96 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 155
R ++ K+ LGV I+ WN+PF I M A+ +GN IVIK SE
Sbjct: 58 SDRPGENILLFKR------ALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTP 111
Query: 156 WSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIM 212
+ F I + +G P+ + +++ G ET G+ L + V + GS G IM
Sbjct: 112 -NNAIAFAKI---VDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM 167
Query: 213 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVH 268
A+K +T V LELGGK IV DD D+ +AV+A + S SGQ C AER YV
Sbjct: 168 AAAAKNITKVCLELGGKAPAIVMDDADLD----LAVKAIVDSRVINSGQVCNCAERVYVQ 223
Query: 269 RDIYALFVSQVAKIVKSVSAGPPLAG-KYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 327
+ IY FV+++ + +++V G P MG L E+++ V A+++GA +
Sbjct: 224 KGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALG 283
Query: 328 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 387
G + Y+PPT++++V M +M EE FGP++P++ F+T EE + +ANDS YG
Sbjct: 284 GK----AVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYG 339
Query: 388 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 445
L ++++ + + A + ++ G IN N+ G + SG G G GL
Sbjct: 340 LTSSIYTQNLNVAMKAIKGLKFGETYIN--RENFEAMQGFHAGWRKSGIGGADGKHGL 395
|
Length = 409 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 215 bits (550), Expect = 2e-63
Identities = 146/456 (32%), Positives = 226/456 (49%), Gaps = 36/456 (7%)
Query: 14 EVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKY---IIEHQELICEISSRDTGKTMV 68
+V+ VA ARKA + W K + +R RILL++ + +H + + + + D GK
Sbjct: 96 DVNRAVAAARKAFDEGPWPKMTAYERS---RILLRFADLLEKHNDELAALETWDNGKPYE 152
Query: 69 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 128
++ E+ + +K + G + P+GV G I+ WN+P
Sbjct: 153 QSAKAELPMFARLFRYYAGWADKIHGLTVPADGPHHVQ----TLHEPIGVAGQIIPWNFP 208
Query: 129 ---FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 185
F P LA GN IV+K +E S + +++ A G P +++V++GF
Sbjct: 209 LLMFAWKVGPALAC---GNTIVLKTAEQTPLSALYAAKLLHEA----GLPPGVLNVVSGF 261
Query: 186 AETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVP 241
T A ++S VDK+ F GS G++++ A+K+ L PVTLELGGK FIVC+D DV
Sbjct: 262 GPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVD 321
Query: 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV-AKIVKSVSAGPPLAGKYDMGA 300
++A A + GQ C R +VH +Y FV + A+ +K V G P + G
Sbjct: 322 KAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRV-VGDPFKKGVEQGP 380
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGS-FGHLSEGAVDQYFPPTVIVNVNHTMKLMQE 359
E EK+ + ++ GA + G FG S+G Y PTV NV M + Q+
Sbjct: 381 QIDSEQFEKILRYIKSGVESGATLECGGDRFG--SKG---YYIQPTVFSNVQDDMLIAQD 435
Query: 360 EAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFAS 419
E FGP+ I+KF +EV++ AN++RYGL VF+ + A ++ ++ G +N F
Sbjct: 436 EIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCF-- 493
Query: 420 NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
+ ++PFGG K SG GR G+ L VK+VV
Sbjct: 494 DVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVV 529
|
Length = 538 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 209 bits (534), Expect = 1e-61
Identities = 144/453 (31%), Positives = 216/453 (47%), Gaps = 36/453 (7%)
Query: 11 SRAEVDERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVD 69
AEVD VA AR A K W K + +R L + I + DTGK
Sbjct: 34 GAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFLAAEVADTGKPRSL 93
Query: 70 ASLGEI-------MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAI 122
AS +I + + +E + P+ + + + K PLGVVG I
Sbjct: 94 ASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRK-------PLGVVGVI 146
Query: 123 VSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI 182
WN P + + A+ GN +V+K SE + ++ A VG P+ + +V+
Sbjct: 147 SPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNA----VGVPKGVYNVV 202
Query: 183 TGF--AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238
GF GE L VD I F G G IM+ A+ + PV+ ELGGK+A IV D
Sbjct: 203 HGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADGVKPVSFELGGKNAAIVFADC 262
Query: 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 298
D +R+A ++GQ C G ER YV R I+ FV+ + +S+ G P +M
Sbjct: 263 DFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPDDPATNM 322
Query: 299 GALCLLEHSEKLQNLVNDALDKGAEILARG---SFG-HLSEGAVDQYFPPTVIVNVNHTM 354
G L EH +K+ + A+++GA ++ G FG L+ GA + PT+ + +
Sbjct: 323 GPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGA---WVQPTIWTGLPDSA 379
Query: 355 KLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 414
+++ EE FGP I F+++EEV+ LAND+ YGL +V++ RA +A Q++ G+ +
Sbjct: 380 RVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWV 439
Query: 415 NDFASNYMCQSL--PFGGVKDSGFGRFAGVEGL 445
N ++ + L PFGG K SG GR GV L
Sbjct: 440 N----SWFLRDLRTPFGGSKLSGIGREGGVHSL 468
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 208 bits (531), Expect = 3e-61
Identities = 136/444 (30%), Positives = 211/444 (47%), Gaps = 35/444 (7%)
Query: 13 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 72
A+VD A++A K WA+ +R+++L + I +H + I + D G+ +
Sbjct: 38 ADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIAVLECLDCGQPL--RQT 95
Query: 73 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM---IHKKAKVEFHPLGVVGAIVSWNYPF 129
+ + + ++ K E GR+ H V P+G VG I WN PF
Sbjct: 96 RQQVIRAAENFRFFAD-----KCEEAMDGRTYPVDTHLNYTV-RVPVGPVGLITPWNAPF 149
Query: 130 HNIFNPMLA------AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 183
ML+ A+ GN +V+K +E WS R+ + A A G P+ + +++
Sbjct: 150 ------MLSTWKIAPALAFGNTVVLKPAE---WSPLTAARLAEIAKEA-GLPDGVFNLVH 199
Query: 184 GFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
GF E G+ALV+ V + F G G +IMRN + TL ++ELGGK IV DD D+
Sbjct: 200 GFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLKRFSMELGGKSPVIVFDDADL 259
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
V +G+ C + R V I FV ++ + V+++ G PL + ++G
Sbjct: 260 ERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGP 319
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAV---DQYFPPTVIVNVNHTMKLM 357
L EH K+ V A +GA IL G G Y PTV ++ M++
Sbjct: 320 LIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIA 379
Query: 358 QEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 417
QEE FGP++ ++ F +EE ++ AND+RYGL V++ RA +A ++ G+ +N
Sbjct: 380 QEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVN-- 437
Query: 418 ASNYMCQSLPFGGVKDSGFGRFAG 441
+ N PFGGVK SG GR G
Sbjct: 438 SQNVRHLPTPFGGVKASGIGREGG 461
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 205 bits (524), Expect = 1e-60
Identities = 132/466 (28%), Positives = 215/466 (46%), Gaps = 46/466 (9%)
Query: 7 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKT 66
F AL+ EVD +A+A + + ++F QR ++ + + + + + + GKT
Sbjct: 17 FTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKT 76
Query: 67 MVDASLGEIMTTCEKITWLLSEGEKWLKPE---YRSSGRSMIHKKAKVEFHPLGVVGAIV 123
+ A E + + + E L E + G S +A V + PLGVV A++
Sbjct: 77 LASAK-AEALKCAKGFRYYAEHAEALLADEPADAAAVGAS----RAYVRYQPLGVVLAVM 131
Query: 124 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 183
WN+P + A+ +GN ++K + N + Q AL L D+
Sbjct: 132 PWNFPLWQVVRFAAPALMAGNVGLLKHASN----------VPQTALY-------LADLFR 174
Query: 184 --GFAET--GEALVSS--VDKII---------FVGSPGVGRMIMRNASKTLTPVTLELGG 228
GF + LV S V+ I+ GS GR + A + LELGG
Sbjct: 175 RAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGG 234
Query: 229 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 288
D FIV D+ A+ AV A +Q++GQ+C A+RF VH D+Y F + + ++
Sbjct: 235 SDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRV 294
Query: 289 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 348
G P D+G L + ++++ V+DA+ GA IL G +G ++PPTVI
Sbjct: 295 GDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCG---GKRPDGP-GWFYPPTVIT 350
Query: 349 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 408
++ M+L EE FGP+ + + +E +++AN + +GLG ++ + ++
Sbjct: 351 DITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLE 410
Query: 409 CGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
G IN +Y LPFGGVK SG+GR G+R C +K+V
Sbjct: 411 AGQVFINGMTVSY--PELPFGGVKRSGYGRELSAHGIREFCNIKTV 454
|
Length = 457 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 204 bits (521), Expect = 9e-60
Identities = 131/442 (29%), Positives = 214/442 (48%), Gaps = 25/442 (5%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
LG P + E + A +A W + K+R LR ++EHQ+ + + + +
Sbjct: 39 LGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQ 98
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHKKAKVEFHPLGVVG 120
GK + +A GEI I W EG++ P +++ R ++ K+ P+GV
Sbjct: 99 GKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQ------PIGVTA 151
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AI WN+P I A+ +G +V+K + +S + A G P + +
Sbjct: 152 AITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRA----GIPAGVFN 207
Query: 181 VITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237
V+TG A G L S+ V K+ F GS +GR +M +K + V+LELGG FIV DD
Sbjct: 208 VVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDD 267
Query: 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD 297
D+ + A+ + +++GQ C A R YV +Y F ++ + V + G L
Sbjct: 268 ADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVT 327
Query: 298 MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLM 357
+G L + K++ + DAL+KGA ++ G H G +F PT++V+V K+
Sbjct: 328 IGPLIDEKAVAKVEEHIADALEKGARVVCGGK-AHELGG---NFFQPTILVDVPANAKVA 383
Query: 358 QEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND- 416
+EE FGP+ P+ +F + +V+ AND+ +GL ++ R + ++ G+ IN
Sbjct: 384 KEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTG 443
Query: 417 FASNYMCQSLPFGGVKDSGFGR 438
SN + PFGG+K SG GR
Sbjct: 444 IISN---EVAPFGGIKASGLGR 462
|
Length = 482 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 202 bits (517), Expect = 1e-59
Identities = 138/459 (30%), Positives = 214/459 (46%), Gaps = 35/459 (7%)
Query: 19 VAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78
V +AR+A + R Q L LL+ + E+++ I E ++D K +A L EI+
Sbjct: 4 VRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLV 63
Query: 79 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH--PLGVVGAIVSWNYPFHNIFNPM 136
+I + +S +W+KPE +++ V + PLGVV I +WNYP P+
Sbjct: 64 KNEIKYAISNLPEWMKPEP--VKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPL 121
Query: 137 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS 195
+ A+ +GN +VIK SE + + +I L + V+ G ET E L
Sbjct: 122 VGAIAAGNCVVIKPSEVSPATAKLLAELIPKYL-----DKECYPVVLGGVEETTELLKQR 176
Query: 196 VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS 255
D I + GS VG+++M+ A+K LTPVTLELGGK V D+ A+ ++
Sbjct: 177 FDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINA 236
Query: 256 GQNCAGAERFYV--HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 313
GQ C + YV ++ FV + K +K P D G + H ++L+ L
Sbjct: 237 GQTCIAPD--YVLCTPEVQEKFVEALKKTLKEFYGEDPKESP-DYGRIINDRHFQRLKKL 293
Query: 314 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT 373
+ G ++ G ++Y PTV+ +V + +MQEE FGPI+PI+ N
Sbjct: 294 L-----SGGKVAIGGQTD-----EKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNN 343
Query: 374 DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKD 433
+E ++ N L VFS ++ +I + G +ND +Y SLPFGGV +
Sbjct: 344 LDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGN 403
Query: 434 SGFGRFAGVEGL-----RACCLVKS-----VVEDRWWPY 462
SG G + G + CLVKS + R+ PY
Sbjct: 404 SGMGAYHGKYSFDTFSHKRSCLVKSLNMEKLNSLRYPPY 442
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 202 bits (517), Expect = 8e-59
Identities = 130/454 (28%), Positives = 206/454 (45%), Gaps = 35/454 (7%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY--IIEHQ--ELICEIS 59
LG ++ E + V AR A W ++ ++R R+LL+ ++ + EL +
Sbjct: 60 LGTVQKATKEEAEAAVQAARAAFPTWRRTPPEER---ARLLLRAAALLRRRRFELAAWM- 115
Query: 60 SRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH-PLGV 118
+ GK +A ++ E I +L + L+ R M+ + + PLGV
Sbjct: 116 VLEVGKNWAEA-DADV---AEAIDFLEYYAREMLR--LRGFPVEMVPGEDNRYVYRPLGV 169
Query: 119 VGAIVSWNYPFHNIFNPM-LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 177
I WN+P I M AA+ +GN +V+K +E+ I++ A G P
Sbjct: 170 GAVISPWNFPL-AILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEA----GLPPG 224
Query: 178 LVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKT------LTPVTLELGG 228
+V+ + G E G+ LV V I F GS VG I A+K L V E+GG
Sbjct: 225 VVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGG 284
Query: 229 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 288
K+A IV +D D+ A+ VR+A GQ C+ R VH +Y F+ ++ + K++
Sbjct: 285 KNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKV 344
Query: 289 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVI 347
G P + MG + ++++ + K L G G + E A + YF PT+
Sbjct: 345 GDPEDPEVYMGPVIDKGARDRIRRYIEIG--KSEGRLLLG--GEVLELAAEGYFVQPTIF 400
Query: 348 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 407
+V +L QEE FGP++ ++K +E +++AND+ YGL VFS S +
Sbjct: 401 ADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREF 460
Query: 408 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 441
+ G N + + PFGG K SG G AG
Sbjct: 461 EVGNLYANRKITGALVGRQPFGGFKMSGTGSKAG 494
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 199 bits (507), Expect = 3e-58
Identities = 125/414 (30%), Positives = 195/414 (47%), Gaps = 20/414 (4%)
Query: 33 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW 92
S + R+ L+ LL+ + E+++ I +D GK ++ E+ + E +KW
Sbjct: 19 SAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKW 78
Query: 93 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 152
+ PE + + KA++ PLGVV I +WN+PF P++ A+ +GN +V+K SE
Sbjct: 79 MAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSE 138
Query: 153 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSV-DKIIFVGSPGVGRMI 211
A + ++I L + VI G AL+ DKI F GSP VGR+I
Sbjct: 139 LAPATSALLAKLIPEYLDT-----KAIKVIEGGVPETTALLEQKWDKIFFTGSPRVGRII 193
Query: 212 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ-IAVRAALQSSGQNCAGAERFYVHRD 270
M A+K LTPVTLELGGK IV VD+ + IA ++GQ C + V
Sbjct: 194 MAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEES 253
Query: 271 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 330
+ + ++ P K D+ + H ++L L++D A+ + G
Sbjct: 254 FAPTLIDALKNTLEKFFGENPKESK-DLSRIVNSHHFQRLSRLLDDP--SVADKIVHG-- 308
Query: 331 GHLSEGAVDQ---YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 387
G D+ Y PT++++ +M EE FGP++PI+ EE +++ N
Sbjct: 309 -----GERDEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKP 363
Query: 388 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 441
L VF+ ++ R I A+ G ND Y +LPFGGV +SGFG + G
Sbjct: 364 LAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHG 417
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 199 bits (508), Expect = 6e-58
Identities = 129/442 (29%), Positives = 208/442 (47%), Gaps = 26/442 (5%)
Query: 8 PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
P + +++ + A A++ W K+S +R L + + + E++ + D GK +
Sbjct: 33 PRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLAVAETWDNGKPV 92
Query: 68 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKA-KVEFH-PLGVVGAIVSW 125
+ +I + + ++ + S I + FH PLGVVG I+ W
Sbjct: 93 RETLAADIPLAIDHFRYFAGC----IRAQ--EGSISEIDENTVAYHFHEPLGVVGQIIPW 146
Query: 126 NYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 185
N+P + A+ +GN +V+K +E S +I L P +V+V+ GF
Sbjct: 147 NFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDLL-----PPGVVNVVNGF 201
Query: 186 -AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 242
E G+ L SS + K+ F G GR+IM+ AS+ + PVTLELGGK I DV
Sbjct: 202 GLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENIIPVTLELGGKSPNIFFADVMDAD 261
Query: 243 VA------QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 296
A + V AL + G+ C R + IY F+ + + VK++ G PL +
Sbjct: 262 DAFFDKALEGFVMFAL-NQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLDTET 320
Query: 297 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 356
+GA LE EK+ + ++ ++GAE+L G L Y+ PT + M++
Sbjct: 321 MIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKG-GNKMRI 379
Query: 357 MQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 416
QEE FGP++ + F +EE +++AND+ YGLG V++ + A + IQ G N
Sbjct: 380 FQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNC 439
Query: 417 FASNYMCQSLPFGGVKDSGFGR 438
+ Y + FGG K SG GR
Sbjct: 440 YHL-YPAHA-AFGGYKQSGIGR 459
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 197 bits (502), Expect = 5e-57
Identities = 132/433 (30%), Positives = 199/433 (45%), Gaps = 19/433 (4%)
Query: 15 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 74
++ VA+ R+ + S + R+ L+ LL+ + +++E I + +D GK V+A E
Sbjct: 8 LEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDE 67
Query: 75 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 134
+ + LS +KW+ P+ A+V PLGVV SWN+P
Sbjct: 68 VGVLTKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLE 127
Query: 135 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS 194
P++ A+ +GN +V+K SE A + F I L + V VI G GE L+
Sbjct: 128 PLIGAIAAGNAVVLKPSELAPATSAFLAANIPKYLDS-----KAVKVIEGGPAVGEQLLQ 182
Query: 195 SV-DKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQ 253
DKI F GSP VGR+IM A+K LTPV LELGGK IV D + ++AV +
Sbjct: 183 HKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIV-DSLSSSRDTKVAVNRIVG 241
Query: 254 S-----SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 308
+GQ C + V + + + +K P K M + +H +
Sbjct: 242 GKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKS-MARILNKKHFQ 300
Query: 309 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 368
+L NL+ D A I+ GS + PT+++N +M EE FGP++PI
Sbjct: 301 RLSNLLKDPRVA-ASIVHGGSI-----DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPI 354
Query: 369 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPF 428
+ E+ + N L F+ ++ R I ++ G ND Y C SLPF
Sbjct: 355 ITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYACDSLPF 414
Query: 429 GGVKDSGFGRFAG 441
GGV +SGFGR+ G
Sbjct: 415 GGVGESGFGRYHG 427
|
Length = 484 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 196 bits (500), Expect = 8e-57
Identities = 100/343 (29%), Positives = 175/343 (51%), Gaps = 18/343 (5%)
Query: 116 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 175
LGV+ AI +N+P + + + + A+ + N +V+K SE S Y I L G P
Sbjct: 140 LGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLS-ALYLADI---LYEAGLP 195
Query: 176 ENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 232
++ V+TG E + L+++ VD + F G +G+ I A LELGG D
Sbjct: 196 PQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG--YRRQVLELGGNDPL 253
Query: 233 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 292
IV +D D+ A +AV+ + ++SGQ C +R V + F + + ++ G P+
Sbjct: 254 IVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPM 313
Query: 293 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 352
DMG + + + VN+A+ +GA +L G++ +GA+ + PTV+ V+
Sbjct: 314 DPSVDMGTVIDEAAAILFEARVNEAIAQGARLLL----GNVRDGAL---YAPTVLDRVDP 366
Query: 353 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 412
+M L++EE FGP+ P+++F ++ ++++N + YGL V + A++Q G
Sbjct: 367 SMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTV 426
Query: 413 AINDFASNYMCQSLPFGGVKDSGFGRFAGV-EGLRACCLVKSV 454
+ + Y + PFGG+KDSG G GV E +++ +K+
Sbjct: 427 NVWE-VPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTY 468
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 195 bits (497), Expect = 1e-56
Identities = 132/459 (28%), Positives = 219/459 (47%), Gaps = 21/459 (4%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
L P +++ + A + W +++ R Q LR + K + E + ++ +R+
Sbjct: 20 LSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREM 79
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 123
GK + A E+ + W G LK E + +++A +E+ PLG + AI+
Sbjct: 80 GKPINQAR-AEVAKSANLCDWYAEHGPAMLKAE----PTLVENQQAVIEYRPLGTILAIM 134
Query: 124 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 183
WN+P + + + +GNG ++K + N GC ++I G P+ + +
Sbjct: 135 PWNFPLWQVMRGAVPILLAGNGYLLKHAPNVM--GCA--QLIAQVFKDAGIPQGVYGWLN 190
Query: 184 GFAETGEALVSSVDKIIFV---GSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
G + + + +I V GS G I A L LELGG D FIV +D D+
Sbjct: 191 A-DNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADL 249
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
+ AV Q++GQ CA A+RF + I + F + ++ G P + +G
Sbjct: 250 ELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGP 309
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
+ + ++L + V L +GA +L G GA + Y+ PTV+ NV M +EE
Sbjct: 310 MARFDLRDELHHQVEATLAEGARLLLG---GEKIAGAGN-YYAPTVLANVTPEMTAFREE 365
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF-AS 419
FGP+ I E ++LANDS +GL +F+ + +AR++AA+++CG IN + AS
Sbjct: 366 LFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCAS 425
Query: 420 NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458
+ + FGGVK SGFGR GL C +++V +DR
Sbjct: 426 D---ARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKDR 461
|
Length = 462 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 193 bits (492), Expect = 4e-56
Identities = 120/443 (27%), Positives = 194/443 (43%), Gaps = 47/443 (10%)
Query: 14 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 73
+VD VA AR A WA S ++R LR + + ++E + + SR+TGK + +A
Sbjct: 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEA-QT 59
Query: 74 EIMTTCEKITWLLSEGEKWLKPEYRSSGR-SMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 132
E+ KI + E M +A + P GV+ +N+P H
Sbjct: 60 EVAAMAGKIDISIKAYH-----ERTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLP 114
Query: 133 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEAL 192
++ A+ +GN +V K SE + + A G P +++++ G ETGEAL
Sbjct: 115 NGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEA----GLPPGVLNLVQGGRETGEAL 170
Query: 193 VSS--VDKIIFVGSPGVGRMIMR----NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 246
+ +D ++F GS G ++ R K L LE+GG + +V D D+ A +
Sbjct: 171 AAHEGIDGLLFTGSAATGLLLHRQFAGRPGKIL---ALEMGGNNPLVVWDVADIDAAAYL 227
Query: 247 AVRAALQSSGQNCAGAERFYVHRDIYA-LFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 305
V++A ++GQ C A R V F+ ++ + K + G P A MG L +
Sbjct: 228 IVQSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAA 287
Query: 306 HSEKLQNLVNDALDKGAEIL-------ARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ 358
+ + D L G E L A +F LS G +D V +
Sbjct: 288 AAARYLLAQQDLLALGGEPLLAMERLVAGTAF--LSPGIID----------VTDAADVPD 335
Query: 359 EEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN--- 415
EE FGP++ + +++ +E + LAN +R+GL + S + A+I+ G+ N
Sbjct: 336 EEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPT 395
Query: 416 DFASNYMCQSLPFGGVKDSGFGR 438
AS+ + PFGGV SG R
Sbjct: 396 TGASS----TAPFGGVGLSGNHR 414
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 189 bits (483), Expect = 2e-54
Identities = 130/452 (28%), Positives = 213/452 (47%), Gaps = 24/452 (5%)
Query: 4 LGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
LG + A++D +A AR+A + W++ + R + LR L + H E + E++
Sbjct: 28 LGVAADATAADMDAAIAAARRAFDETDWSRDT-ALRVRCLRQLRDALRAHVEELRELTIA 86
Query: 62 DTGKTMVDASLGEIMTTCEKITWL--LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVV 119
+ G + + ++ + + + L+E W + + I + + +GVV
Sbjct: 87 EVGAPRMLTAGAQLEGPVDDLGFAADLAESYAW-TTDLGVASPMGIPTRRTLRREAVGVV 145
Query: 120 GAIVSWNYPFHNI----FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 175
GAI WN+P H I P LAA GN +V+K + + W +I P
Sbjct: 146 GAITPWNFP-HQINLAKLGPALAA---GNTVVLKPAPDTPWCAAVLGELIAEH---TDFP 198
Query: 176 ENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 232
+V+++T AL++ VD + F GS GR +M +A+ TL V LELGGK AF
Sbjct: 199 PGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVMADAAATLKKVFLELGGKSAF 258
Query: 233 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 292
IV DD D+ +A +GQ CA R V R Y V+ A + S+ G P
Sbjct: 259 IVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPRARYDEAVAAAAATMGSIKPGDPA 318
Query: 293 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 352
G + +++Q+ ++ A+ +G G G ++ + PTVI +++
Sbjct: 319 DPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGG--GRPADRDRGFFVEPTVIAGLDN 376
Query: 353 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 412
++ +EE FGP++ ++ + D++ V++ANDS YGL VF RA +AA+++ G
Sbjct: 377 NARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVFGADPERAAAVAARVRTGTV 436
Query: 413 AINDFASNYMCQSLPFGGVKDSGFGRFAGVEG 444
+N + PFGG K SG GR GV G
Sbjct: 437 NVN--GGVWYSADAPFGGYKQSGIGREMGVAG 466
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 189 bits (483), Expect = 3e-54
Identities = 128/471 (27%), Positives = 213/471 (45%), Gaps = 44/471 (9%)
Query: 8 PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY---IIEHQELICEISSRDTG 64
P + EVD VA A+ A W+ + +R +++ K+ + E+ + + + + + G
Sbjct: 33 PLATAEEVDAAVAAAKAAFPAWSATPVLKR---QQVMFKFRQLLEENLDELARLITLEHG 89
Query: 65 KTMVDASLGEIMTTCEKITWLLSEGEKWLKPEY-RSSGRSMIHKKAKVEFHPLGVVGAIV 123
KT+ DA G+++ E + + S LK EY + R + PLGVV I
Sbjct: 90 KTLADA-RGDVLRGLEVVEFACSIPHL-LKGEYLENVARGID---TYSYRQPLGVVAGIT 144
Query: 124 SWNYPFH--NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 181
+N+P PM A+ GN V+K SE + ++Q A G P+ +++V
Sbjct: 145 PFNFPAMIPLWMFPM--AIACGNTFVLKPSERVPGAAMRLAELLQEA----GLPDGVLNV 198
Query: 182 ITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVD 239
+ G E AL+ + + FVGS VG I A+ V G K+ +V D D
Sbjct: 199 VHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKRVQALGGAKNHAVVMPDAD 258
Query: 240 VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMG 299
+ A V AA ++GQ C D ++ ++ + K + G DMG
Sbjct: 259 LEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMG 318
Query: 300 ALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVIVNVNHTMKLMQ 358
+ E+++ L+ +++GA+++ G G G + F PT++ NV MK+ +
Sbjct: 319 PVISPAAKERIEGLIESGVEEGAKLVLDGR-GVKVPGYENGNFVGPTILDNVTPDMKIYK 377
Query: 359 EEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN--- 415
EE FGP++ I++ +T +E + + N + YG G A+F+ S AR+ ++ G+ IN
Sbjct: 378 EEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPI 437
Query: 416 -----DFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVVEDRW 459
F FGG K S FG F G +G+R K+V RW
Sbjct: 438 PVPLAFF---------SFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTS-RW 478
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 189 bits (481), Expect = 5e-54
Identities = 126/438 (28%), Positives = 214/438 (48%), Gaps = 29/438 (6%)
Query: 11 SRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 68
++D V+ AR + W+ SS +R+ L L + H E + + + DTGK +
Sbjct: 55 KSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIR 114
Query: 69 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 128
+ +I I W +K + E ++ H+ A + P+GV+ AIV WN+P
Sbjct: 115 HSLRDDIPGAARAIRWYAEAIDK-VYGEVATTSS---HELAMIVREPVGVIAAIVPWNFP 170
Query: 129 FHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 185
P LAA GN +++K SE + S + + A G P+ +++V+TGF
Sbjct: 171 LLLTCWKLGPALAA---GNSVILKPSEKSPLSAIRLAGLAKEA----GLPDGVLNVVTGF 223
Query: 186 A-ETGEALV--SSVDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDV-DV 240
E G+AL + +D I F GS G+ ++++A + + V LE GGK A IV D D+
Sbjct: 224 GHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDL 283
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
A + GQ C R + I F++ + + ++ G PL MG
Sbjct: 284 QQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGT 343
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
L H++ + + + + KG +L + G + PT+ V+V+ L +EE
Sbjct: 344 LIDCAHADSVHSFIREGESKGQLLLDGRNAGLAA------AIGPTIFVDVDPNASLSREE 397
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
FGP++ + +F ++E+ ++LANDS+YGLG AV++ RA ++ +++ G +N++
Sbjct: 398 IFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDG 457
Query: 421 YMCQSLPFGGVKDSGFGR 438
M ++PFGG K SG GR
Sbjct: 458 DM--TVPFGGYKQSGNGR 473
|
Length = 494 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 185 bits (471), Expect = 1e-52
Identities = 138/469 (29%), Positives = 226/469 (48%), Gaps = 52/469 (11%)
Query: 11 SRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG---- 64
+ +VD VA A++A + W K + + R + + L + EHQE + I S D+G
Sbjct: 41 TVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQEELATIESLDSGAVYT 100
Query: 65 ---KTMVDASLGEIMTT------CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHP 115
KT V S I T C+KI +G+ + R + + K+ P
Sbjct: 101 LALKTHVGMS---IQTFRYFAGWCDKI-----QGKTIPINQARPNRNLTLTKR-----EP 147
Query: 116 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA-VGA 174
+GV G ++ WNYP + M A + +GN +V+K ++ + + A L G
Sbjct: 148 IGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKF-----AELTVKAGF 202
Query: 175 PENLVDVITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKD 230
P+ +++++ G G+ L D K+ F GS +G+ IM++ + + L V+LELGGK
Sbjct: 203 PKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKS 262
Query: 231 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 290
I+ D D+ ++ + + + G+NC A R +V I+ FV +V + VK + G
Sbjct: 263 PLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGD 322
Query: 291 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ---YFPPTVI 347
PL D G H +KL + +GA ++ G VD+ +F PTV
Sbjct: 323 PLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGK-------QVDRPGFFFEPTVF 375
Query: 348 VNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAA 405
+V M + +EE+FGPIM I KF+ + V++ AND+ YGL VF+ ++A ++
Sbjct: 376 TDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVSD 435
Query: 406 QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
+++ G +N + N + PFGG K SGFG+ G E L K+V
Sbjct: 436 KLEAGTVFVNTY--NKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTV 482
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 175 bits (445), Expect = 5e-49
Identities = 133/461 (28%), Positives = 215/461 (46%), Gaps = 36/461 (7%)
Query: 8 PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
S +VD V A A W +++ K R + L L I E+ ++ E+ SR+ GK +
Sbjct: 33 AEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVFAELESRNCGKPL 92
Query: 68 VDASLGEIMTTCEKITWL---------LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGV 118
EI + + L+ GE Y SMI + PLGV
Sbjct: 93 HSVFNDEIPAIVDVFRFFAGAARCLSGLAAGE------YLEGHTSMIRRD------PLGV 140
Query: 119 VGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENL 178
V +I WNYP + A+ +GN +V+K SE + A LA P +
Sbjct: 141 VASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA-LKL----AELAKDIFPAGV 195
Query: 179 VDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235
V+++ G +T G+ L V + GS G I+ + + ++ +ELGGK IV
Sbjct: 196 VNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKRTHMELGGKAPVIVF 255
Query: 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 295
DD D+ V + ++GQ+C A R Y R IY V ++ V ++ +G P
Sbjct: 256 DDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDES 315
Query: 296 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMK 355
++G L L H E++ V +A G + G G +G YF PT++
Sbjct: 316 TELGPLSSLAHLERVMKAVEEAKALGHIKVITG--GEKRKGN-GYYFAPTLLAGAKQDDA 372
Query: 356 LMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 415
++Q+E FGP++ I F+ +E+VV ANDS+YGL +V++ RA ++A++Q G +N
Sbjct: 373 IVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVN 432
Query: 416 DFASNYMCQS-LPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
+++M S +P GG K SG+G+ + GL +V+ ++
Sbjct: 433 ---THFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIM 470
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 170 bits (432), Expect = 1e-46
Identities = 119/457 (26%), Positives = 199/457 (43%), Gaps = 55/457 (12%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK---YIIEHQELICEISS 60
+G ++ ++ + A +A + W K S + R RILL+ I +
Sbjct: 64 VGRVSKATKELAEKAMQAALEAFETWKKWSPEDRA---RILLRAAAIIRRRKHEFSAWLV 120
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVE-------- 112
++ GK +A + T E I +L EY R M+
Sbjct: 121 KEAGKPWAEAD-AD---TAEAIDFL----------EY--YARQMLKLADGKPVESRPGEH 164
Query: 113 ----FHPLGVVGAIVSWNYPFHNIFNPM-LAAVFSGNGIVIKVSENASWSGCFYFRIIQA 167
+ PLGV I WN+PF I M LAA+ +GN +++K + + + +++
Sbjct: 165 NRYFYIPLGVGVVISPWNFPF-AIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEE 223
Query: 168 ALAAVGAPENLVDVITGF-AETGEALVSSVDK--IIFVGSPGVGRMIMRNASKT------ 218
A G P +V+ + G +E G+ LV I F GS VG I A+K
Sbjct: 224 A----GLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQIW 279
Query: 219 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 278
L V E+GGKDA +V +D D+ A+ V +A SGQ C+ R VH D+Y + +
Sbjct: 280 LKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEK 339
Query: 279 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAV 338
V ++ K ++ G P Y MG + ++ + + ++ G E R G + +
Sbjct: 340 VVELTKELTVGNPEDNAY-MGPVI----NQASFDKIMSYIEIGKE-EGRLVLGGEGDDSK 393
Query: 339 DQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 398
+ PT+ +V+ ++MQEE FGP++ +K + +++AN++ YGL AV S ++
Sbjct: 394 GYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNRE 453
Query: 399 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSG 435
+ + G N + + PFGG SG
Sbjct: 454 HLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSG 490
|
Length = 514 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 166 bits (422), Expect = 1e-45
Identities = 130/459 (28%), Positives = 209/459 (45%), Gaps = 30/459 (6%)
Query: 7 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKT 66
A ++ EV++ + A+ AQK WAK+ +R + L + EH+ I E ++ K
Sbjct: 47 VQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP 106
Query: 67 MVDA------SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
DA S I T E+ +L EG+ + + + R+ +K+ PLGVV
Sbjct: 107 AKDAVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKI---PLGVVL 163
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AI +NYP + + + A+ +GN +V+K + + ++ A G P+ L+
Sbjct: 164 AIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAA---LHMVHCFHLA-GFPKGLIS 219
Query: 181 VITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237
+TG +E G+ L V+ I F G G I + A + P+ +ELGGKDA IV +D
Sbjct: 220 CVTGKGSEIGDFLTMHPGVNCISFTGGD-TGIAISKKAG--MVPLQMELGGKDACIVLED 276
Query: 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD 297
D+ A ++ SGQ C + V + V +V V ++ GPP D
Sbjct: 277 ADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPP-EDDCD 335
Query: 298 MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLM 357
+ + + ++ LV DA +KGA P ++ NV M++
Sbjct: 336 ITPVVSESSANFIEGLVMDAKEKGATF-------CQEWKREGNLIWPLLLDNVRPDMRIA 388
Query: 358 QEEAFGPIMPIMKFNTDEEVVKLANDSRYGL-GCAVFSGSQHRAREIAAQIQCGVAAIND 416
EE FGP++P+++ N+ EE + N S +GL GC VF+ ++A I+ ++ G IN
Sbjct: 389 WEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGC-VFTRDINKAILISDAMETGTVQINS 447
Query: 417 FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
A PF G+KDSG G + VKS V
Sbjct: 448 -APARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTV 485
|
Length = 496 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 9e-44
Identities = 119/456 (26%), Positives = 201/456 (44%), Gaps = 56/456 (12%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
+ + + + A++A K W +R + +R + + + +E + ++ S + GK + +
Sbjct: 32 TPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKLVSLEMGKILPEG 91
Query: 71 SLGEI---MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 127
LGE+ + C+ L + P R G M+ + ++PLGVVG I ++N+
Sbjct: 92 -LGEVQEMIDICDFAVGLSRQLYGLTIPSERP-GHRMMEQ-----WNPLGVVGVITAFNF 144
Query: 128 PFHNIF--NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 185
P ++ N +A V GN +V K S + +I+ L G P + ++ G
Sbjct: 145 PV-AVWGWNAAIALV-CGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGG 202
Query: 186 AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHV 243
A+ GEALV V + F GS VGR + + + LELGG +A IV +D D+
Sbjct: 203 ADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGRSLLELGGNNAIIVMEDADLDLA 262
Query: 244 AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 303
+ + AA+ ++GQ C R VH IY + ++ K K V G PL +G L
Sbjct: 263 VRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPL-- 320
Query: 304 LEHSEKLQNLVNDALDK----GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQE 359
H++ + A+++ G +L FG Y PT IV +++E
Sbjct: 321 --HTKAAVDNYLAAIEEAKSQGGTVL----FGGKVIDGPGNYVEPT-IVEGLSDAPIVKE 373
Query: 360 EAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI-----AAQIQCGVAAI 414
E F PI+ ++KF+T EE + N+ GL ++F+ R CG+ +
Sbjct: 374 ETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDL---RNAFRWLGPKGSDCGIVNV 430
Query: 415 NDFASNYMCQSLP---------FGGVKDSGFGRFAG 441
N + FGG K++G GR +G
Sbjct: 431 N----------IGTSGAEIGGAFGGEKETGGGRESG 456
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 161 bits (408), Expect = 9e-44
Identities = 126/449 (28%), Positives = 211/449 (46%), Gaps = 29/449 (6%)
Query: 62 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGA 121
D GK +++S+ E+ I L + + W+ PE + + A++ PLGVV
Sbjct: 59 DLGKPELESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLV 118
Query: 122 IVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 181
I +WNYPF +P++ A+ +GN +V+K SE A S ++++ L + + V V
Sbjct: 119 ISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQYLDS-----SAVRV 173
Query: 182 ITG-FAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
+ G ET L DKI + GS +GR+IM A+K LTPV LELGGK +V D D+
Sbjct: 174 VEGAVTETTALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDL 233
Query: 241 P-HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMG 299
V +I ++GQ C + ++ + + K +++ P+ K DM
Sbjct: 234 KVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESK-DMS 292
Query: 300 ALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ---YFPPTVIVNVNHTMKL 356
+ H ++L L+++ E+ + +G G D+ PT++++V +
Sbjct: 293 RIVNSTHFDRLSKLLDE-----KEVSDKIVYG----GEKDRENLKIAPTILLDVPLDSLI 343
Query: 357 MQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 416
M EE FGP++PI+ N EE + L +F+ ++ AA + G +ND
Sbjct: 344 MSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVND 403
Query: 417 FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVA 476
A + +LPFGGV +SG G + G A K+V+ Y ++YP
Sbjct: 404 IAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVL------YRSLFGDSAVRYPPY 457
Query: 477 ENGFEFQESLVEALYGLNIWDRLRALVNV 505
G + L++AL NI+D + L+ +
Sbjct: 458 SRG---KLRLLKALVDSNIFDIFKVLLGL 483
|
Length = 484 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 155 bits (392), Expect = 2e-41
Identities = 115/442 (26%), Positives = 195/442 (44%), Gaps = 26/442 (5%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
S+ + + A KA + W K+ ++R L + + + ++ GK +A
Sbjct: 67 SQEHAEHALQAAAKAFEAWKKTDPEERAAILFKAAAIVRRRRHEFSALLVKEVGKPWNEA 126
Query: 71 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 130
E I ++ + ++ S + + + P GV I WN+PF
Sbjct: 127 D----AEVAEAIDFMEYYARQMIELAKGKPVNSREGETNQYVYTPTGVTVVISPWNFPFA 182
Query: 131 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETG 189
+ +A + +GN +V+K +E A + I++ A G P+ +V + G +E G
Sbjct: 183 IMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFVEILEEA----GLPKGVVQFVPGSGSEVG 238
Query: 190 EALVSSVDK--IIFVGSPGVGRMIMRNASKT------LTPVTLELGGKDAFIVCDDVDVP 241
+ LV I F GS VG I A+K L V E+GGKD IV +D D+
Sbjct: 239 DYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQKHLKRVIAEMGGKDTVIVDEDADIE 298
Query: 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 301
AQ A +A +GQ C+ R VH +Y V + +I +S+ GPP + +G +
Sbjct: 299 LAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYDEVVERFVEITESLKVGPPDSADVYVGPV 358
Query: 302 CLLEHSEKLQNLVNDALDKGAE--ILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQE 359
+K N + + ++ G L G G S+G + PT+ +V+ +L QE
Sbjct: 359 I----DQKSFNKIMEYIEIGKAEGRLVSGGCGDDSKG---YFIGPTIFADVDRKARLAQE 411
Query: 360 EAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFAS 419
E FGP++ ++ + +E +++AN++ YGL V S ++ A+ + G N +
Sbjct: 412 EIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRDHINRAKAEFEVGNLYFNRNIT 471
Query: 420 NYMCQSLPFGGVKDSGFGRFAG 441
+ PFGG K SG AG
Sbjct: 472 GAIVGYQPFGGFKMSGTDSKAG 493
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 150 bits (379), Expect = 8e-40
Identities = 129/478 (26%), Positives = 197/478 (41%), Gaps = 51/478 (10%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY---IIEHQELICEISS 60
S EVD VA AR+ W ++S QR +LL+Y + EH++ I E+ +
Sbjct: 29 TTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTS---VLLRYQALLKEHRDEIAELIT 85
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
+ GKT DA LG++ E + + + PLGV
Sbjct: 86 AEHGKTHSDA-LGDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIR---QPLGVCA 141
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
I +N+P A+ GN V+K SE + + A GAP+ +++
Sbjct: 142 GITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEA----GAPDGVLN 197
Query: 181 VITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238
V+ G E + L+ V + FVGS +GR I S V G K+ +V D
Sbjct: 198 VVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRVQALGGAKNHMVVMPDA 257
Query: 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV-------KSVSAGPP 291
D A V AA ++GQ C A+ V + V + + GP
Sbjct: 258 DKDAAADALVGAAYGAAGQRCMAIS--------AAVLVGAADEWVPEIRERAEKIRIGPG 309
Query: 292 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVIVNV 350
+MG L + +++ +L+ +GAE+L G G+ +G + + PT++ V
Sbjct: 310 DDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGR-GYKVDGYEEGNWVGPTLLERV 368
Query: 351 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 410
TMK QEE FGP++ +++ +T EE + L N S YG G A+F+ AR +I+ G
Sbjct: 369 PPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVG 428
Query: 411 VAAIN-------DFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVVEDRW 459
+N + S F G KDS FG G +G K V RW
Sbjct: 429 QVGVNVPIPVPLPYFS--------FTGWKDSFFGDHHIYGKQGTHFYTRGK-TVTTRW 477
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 148 bits (376), Expect = 3e-39
Identities = 108/453 (23%), Positives = 180/453 (39%), Gaps = 31/453 (6%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+G +AE + + A A K W + R + L + + + + +
Sbjct: 46 VGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEV 105
Query: 64 GKTMVDAS--LGEIMTTCE--KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVV 119
GK V+A + E + L Y + LG
Sbjct: 106 GKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYV-------GLGAG 158
Query: 120 GAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLV 179
I WN+P ++A V GN ++ K +E+A G F I A G P +V
Sbjct: 159 VVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEA----GFPPGVV 214
Query: 180 DVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASK------TLTPVTLELGGKD 230
+ G E G L + I F GS G+ I A++ + +E GGK+
Sbjct: 215 QFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARLAPGQTWFKRLYVETGGKN 274
Query: 231 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 290
A IV + D V + V +A GQ C+ A R + + Y + ++ K + +S GP
Sbjct: 275 AIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERLSVGP 334
Query: 291 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 350
P D+G + E K+ + + ++G +++ G EG + PTV+ V
Sbjct: 335 PEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGK---RLEG-EGYFVAPTVVEEV 389
Query: 351 NHTMKLMQEEAFGPIMPIMKFNTDE--EVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 408
++ QEE FGP++ ++++ D+ E +++AN + YGL V+S + E +
Sbjct: 390 PPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFH 449
Query: 409 CGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 441
G IN + + PFGG K SG G
Sbjct: 450 VGNLYINRKITGALVGVQPFGGFKLSGTNAKTG 482
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 148 bits (376), Expect = 6e-39
Identities = 109/450 (24%), Positives = 189/450 (42%), Gaps = 45/450 (10%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ-ELICEISSRDTGKTMVD 69
+VD +A A A W+ + ++R + L + ++ ELI +++ + GKT+ D
Sbjct: 67 DAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGELIA-LAAAEAGKTLAD 125
Query: 70 ASLGEIMTTCEKITWL-----LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 124
A E+ E I + + +G + +E H GV I
Sbjct: 126 A-DAEVR---EAIDFCRYYAAQARELFSDPELPGPTG-----ELNGLELHGRGVFVCISP 176
Query: 125 WNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 183
WN+P IF + AA+ +GN ++ K +E R ++ A G P +++ ++
Sbjct: 177 WNFPL-AIFTGQIAAALAAGNTVIAKPAEQTPLIAA---RAVELLHEA-GVPRDVLQLVP 231
Query: 184 GF-AETGEALVS--SVDKIIFVGSPGVGRMIMR---NASKTLTPVTLELGGKDAFIVCDD 237
G E GEALV+ +D +IF GS ++I R + P+ E GGK+A IV
Sbjct: 232 GDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNAMIVDST 291
Query: 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD 297
+ V++A S+GQ C+ Y+ +I F+ + + S+ G P D
Sbjct: 292 ALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLSTD 351
Query: 298 MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ----YFPPTVIVNVNHT 353
+G L + L+ L RG ++ +D + P +I V
Sbjct: 352 VGPLIDKPAGKLLRAHTE---------LMRGEAWLIAPAPLDDGNGYFVAPGIIEIVG-- 400
Query: 354 MKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 411
+ + E FGPI+ +++F + +E ++ N + YGL + S + +++ G
Sbjct: 401 IFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGN 460
Query: 412 AAINDFASNYMCQSLPFGGVKDSGFGRFAG 441
IN + + PFGG SG G AG
Sbjct: 461 LYINRNITGAIVGRQPFGGWGLSGTGPKAG 490
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 142 bits (359), Expect = 9e-37
Identities = 111/444 (25%), Positives = 205/444 (46%), Gaps = 52/444 (11%)
Query: 13 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGK------T 66
A+VD V AR A WA+ SF++R+ + + E++E + E+ +R+TGK T
Sbjct: 37 AQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPLWEAAT 96
Query: 67 MVDASLGEI---MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 123
V A + +I + + T GEK M A + P GVV
Sbjct: 97 EVTAMINKIAISIQAYHERT-----GEK---------RSEMADGAAVLRHRPHGVVAVFG 142
Query: 124 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 183
+N+P H ++ A+ +GN +V K SE W ++ Q A G P +++++
Sbjct: 143 PYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQA----GLPAGVLNLVQ 198
Query: 184 GFAETGEALVSS--VDKIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCDDVDV 240
G ETG+AL + +D ++F GS G ++ R A + + LE+GG + ++ + D+
Sbjct: 199 GGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADI 258
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYA-LFVSQVAKIVKSVSAGPPLAGKYD-- 297
+ +++A S+GQ C A R V + F++++ + K ++ G A +
Sbjct: 259 DAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDA---EPQ 315
Query: 298 --MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMK 355
MGA+ + ++ L L G + L +++ I++V +
Sbjct: 316 PFMGAVISEQAAQGLVAAQAQLLALGGKSLL-----EMTQLQAGTGLLTPGIIDVTGVAE 370
Query: 356 LMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA--- 412
L EE FGP++ +++++ +E ++LAN++R+GL + S + + +I+ G+
Sbjct: 371 LPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWN 430
Query: 413 -AINDFASNYMCQSLPFGGVKDSG 435
+ +S + PFGGV SG
Sbjct: 431 KPLTGASS-----AAPFGGVGASG 449
|
Length = 487 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 136 bits (346), Expect = 6e-36
Identities = 47/112 (41%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Query: 345 TVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIA 404
TV+V+V+ M + QEE FGP++P+++F +EE + LAND+ YGL VF+ +RA +A
Sbjct: 257 TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA 316
Query: 405 AQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456
+++ G IND + PFGGVK+SG GR G GL K+VV
Sbjct: 317 ERLRAGTVYINDSSIGVG-PEAPFGGVKNSGIGREGGPYGLEEYTRTKTVVI 367
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 3e-33
Identities = 115/450 (25%), Positives = 203/450 (45%), Gaps = 56/450 (12%)
Query: 9 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 68
A S A+V+ VA AR A WA+ S ++R ++ + E +E + + +R+TGK +
Sbjct: 31 AASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALARVIARETGKPLW 90
Query: 69 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS---MIHKKAKVEFHPLGVVGAIVSW 125
+ E+ + K+ +S +K + +G S M +A + P GVV +
Sbjct: 91 ET-RTEVASMIGKVA--IS-----IKAYHERTGESENPMPDGRAVLRHRPHGVVAVFGPY 142
Query: 126 NYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 185
N+P H ++ A+ +GN +V K SE W ++ + A G P +++++ G
Sbjct: 143 NFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEKA----GLPAGVLNLVQGA 198
Query: 186 AETGEALVS--SVDKIIFVGSPGVGRMIMRNAS----KTLTPVTLELGGKDAFIVCDDVD 239
ETG AL + +D ++F GS G ++ R + K L LE+GG + IV + D
Sbjct: 199 RETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKILA---LEMGGNNPLIVDEVAD 255
Query: 240 VPHVAQIAVRAALQSSGQNCAGAERFYVHRD-----IYALFVSQVAKIVKSVSAGPPLAG 294
+ + +++A S+GQ C A R V A V ++ G
Sbjct: 256 IDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLT---------VG 306
Query: 295 KYD------MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 348
+D MGA+ L+ +++L L G + L L GA I+
Sbjct: 307 AWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLA--MRQLDPGAA---LLTPGII 361
Query: 349 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 408
+V +L EE FGP++ +++++ +E + +AN++R+GL + S + +I+
Sbjct: 362 DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIR 421
Query: 409 CGVAAIN---DFASNYMCQSLPFGGVKDSG 435
G+ N AS+ + PFGG+ SG
Sbjct: 422 AGIVNWNKPLTGASS----AAPFGGIGASG 447
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 124 bits (314), Expect = 8e-31
Identities = 115/427 (26%), Positives = 193/427 (45%), Gaps = 26/427 (6%)
Query: 25 AQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA--SLGEIMTTCEKI 82
A K+W + +R + +R + + + + + S + GK + + + EI+ C+
Sbjct: 68 AAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGIGEVQEIIDMCDFA 127
Query: 83 TWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI-FNPMLAAVF 141
L + + P R + H +V ++PLG+VG I ++N+P + +N +A V
Sbjct: 128 VGLSRQLNGSIIPSERPN-----HMMMEV-WNPLGIVGVITAFNFPCAVLGWNACIALV- 180
Query: 142 SGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALV--SSVDKI 199
GN +V K + +++ L P + G AE GEA+ + + +
Sbjct: 181 CGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLV 240
Query: 200 IFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNC 259
F GS VG M+ + + LEL G +A IV DD D+ + + AA+ ++GQ C
Sbjct: 241 SFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRC 300
Query: 260 AGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 319
R +H IY + Q+ + K V G PL +G L E + + +
Sbjct: 301 TTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKS 360
Query: 320 KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVK 379
+G +IL GS SEG + PT IV ++ +++EE FGP++ +MKF T EE ++
Sbjct: 361 QGGKILTGGSAIE-SEG---NFVQPT-IVEISPDADVVKEELFGPVLYVMKFKTLEEAIE 415
Query: 380 LANDSRYGLGCAVFSGSQHRAREIAAQI-----QCGVAAINDFASNYMCQSLPFGGVKDS 434
+ N GL ++F+ I I CG+ +N +N FGG K +
Sbjct: 416 INNSVPQGLSSSIFT---RNPETIFKWIGPLGSDCGIVNVN-IPTNGAEIGGAFGGEKAT 471
Query: 435 GFGRFAG 441
G GR AG
Sbjct: 472 GGGREAG 478
|
Length = 508 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 6e-28
Identities = 83/328 (25%), Positives = 146/328 (44%), Gaps = 20/328 (6%)
Query: 115 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 174
P+GVV AI ++N+P + I + + A+ +G +++K + S + ++ A G
Sbjct: 124 PIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEA----GL 179
Query: 175 PENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 232
PE + E LV+ V F+GS VG M+ + T LE GG
Sbjct: 180 PEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAPG-TRCALEHGGAAPV 238
Query: 233 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 292
IV D+ + V+ +GQ C +R +V +I F ++A + + G P
Sbjct: 239 IVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPT 298
Query: 293 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 352
++G L ++++ VN+A+ GA +L G LS D + PTV+++
Sbjct: 299 DPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGK--RLS----DTTYAPTVLLDPPR 352
Query: 353 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 412
K+ +E FGP++ + ++ +E + AN AVF+ A + ++
Sbjct: 353 DAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAV 412
Query: 413 AIND---FASNYMCQSLPFGGVKDSGFG 437
+ND F ++M PF G + SG+G
Sbjct: 413 MVNDHTAFRVDWM----PFAGRRQSGYG 436
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 5e-26
Identities = 102/446 (22%), Positives = 177/446 (39%), Gaps = 31/446 (6%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+G + A V + A++A W + K+R L L + H + + R+
Sbjct: 65 VGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMPELMALCVREA 124
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 123
GKT+ +A I E + + R + + + GV I
Sbjct: 125 GKTIHNA----IAEVREAVDFC------------RYYAKQVRDVLGEFSVESRGVFVCIS 168
Query: 124 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 183
WN+P + AA+ +GN ++ K +E S ++Q A G P + ++
Sbjct: 169 PWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEA----GFPAGTIQLLP 224
Query: 184 GFAET-GEALVS--SVDKIIFVGSPGVGRMIMRN-ASKTLTPVTL--ELGGKDAFIVCDD 237
G G AL S + + F GS V ++I + A + PV L E GG++A IV
Sbjct: 225 GRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDST 284
Query: 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD 297
V + +R+A S+GQ C+ V D+ ++ + ++ + G P D
Sbjct: 285 ALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTD 344
Query: 298 MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLM 357
+G + E + L + +I A+ + + PT+ ++ +L
Sbjct: 345 VGPVIDAEAKQNLLAHIEHMSQTQKKI-AQLTLDDSRACQHGTFVAPTLF-ELDDIAEL- 401
Query: 358 QEEAFGPIMPIMKFNTDE--EVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 415
EE FGP++ ++++ E ++V N + YGL V S + R I + G +N
Sbjct: 402 SEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVN 461
Query: 416 DFASNYMCQSLPFGGVKDSGFGRFAG 441
+ PFGG SG G AG
Sbjct: 462 RNQVGAVVGVQPFGGQGLSGTGPKAG 487
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 4e-25
Identities = 123/474 (25%), Positives = 203/474 (42%), Gaps = 79/474 (16%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQ-FLRI--LL--KYIIEHQELICEI 58
L + A V++ + A +A+K WA+ F+ R FL+ LL KY
Sbjct: 60 LATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKY----------- 108
Query: 59 SSRDT---------GKTMVDASLGEIMTTCEKITWL---LSEGEKWLKPEYRSSGRSMIH 106
R GK + A EI CE I +L + E+ + SS + +
Sbjct: 109 --RYELNAATMLGQGKNVWQA---EIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWN 163
Query: 107 KKAKVEFHPL-GVVGAIVSWNYPFHNI-FNPMLAAVFSGNGIVIKVSENASWSGCFYFRI 164
+ +E+ PL G V A+ +N F I N A GN ++ K S+ A S ++I
Sbjct: 164 R---LEYRPLEGFVYAVSPFN--FTAIGGNLAGAPALMGNVVLWKPSDTAVLSNYLVYKI 218
Query: 165 IQAALAAVGAPENLVDVITGFAET-GEALVSSVD--KIIFVGSPGVGRMIMRNAS----- 216
++ A G P +++ + G G+ +++S + F GS + + +
Sbjct: 219 LEEA----GLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDR 274
Query: 217 -KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 275
+T + E GGK+ +V DV + VR A + GQ C+ A R YV ++
Sbjct: 275 YRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEV 334
Query: 276 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA-LDKGAEILARGSFGHLS 334
++ + +K + G P MGA+ + ++++ ++ A D AEI+A G S
Sbjct: 335 KERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDD-S 393
Query: 335 EGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLAND-SRYGLGC 390
G YF PTVI + KLM EE FGP++ + + EE ++L + S Y L
Sbjct: 394 VG----YFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTG 449
Query: 391 AVFSGSQHRAREIAAQIQCGVAAINDFASNYM--CQSL-------PFGGVKDSG 435
A+F A++ A I+ A+ + A N+ + PFGG + SG
Sbjct: 450 AIF------AQDRKA-IREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASG 496
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 8e-24
Identities = 104/420 (24%), Positives = 182/420 (43%), Gaps = 31/420 (7%)
Query: 8 PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR------ 61
P + E V+ A++A +W + R+ R++LK+ QELI + +
Sbjct: 146 PLTTNEEFKAAVSAAKQAFPLWRNTPITTRQ---RVMLKF----QELIRKNMDKLAMNIT 198
Query: 62 -DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
+ GKT+ D S G+I E + + EY + + + + E PLGV
Sbjct: 199 TEQGKTLKD-SHGDIFRGLEVVEHACGMATLQMG-EYLPNVSNGVDTYSIRE--PLGVCA 254
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA-AVGAPENLV 179
I +N+P AV GN ++K SE + +I A LA G P+ ++
Sbjct: 255 GICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGAS-----VILAELAMEAGLPDGVL 309
Query: 180 DVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237
+++ G +T A+ D + FVGS G I A+ + +G K+ +V D
Sbjct: 310 NIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPD 369
Query: 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI--YALFVSQVAKIVKSVSAGPPLAGK 295
++ + A ++GQ C D + + + AK +K P A
Sbjct: 370 ANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVERAKALKVTCGSEPDA-- 427
Query: 296 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMK 355
D+G + + E++ L+ +D GA++L G + + PT++ V M+
Sbjct: 428 -DLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDME 486
Query: 356 LMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 415
+EE FGP++ M+ N+ +E + + N ++YG G A+F+ S AR+ I+ G IN
Sbjct: 487 CYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGIN 546
|
Length = 604 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 1e-22
Identities = 102/447 (22%), Positives = 182/447 (40%), Gaps = 37/447 (8%)
Query: 5 GYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG 64
G + A+V++ + A A +W+ + +R L + + + R+ G
Sbjct: 142 GTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAG 201
Query: 65 KTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 124
KT+ +A I E + +L ++ + R + PLG V I
Sbjct: 202 KTLSNA----IAEVREAVDFL-----RYYAGQAR-------DTFGNLTHRPLGPVVCISP 245
Query: 125 WNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 184
WN+P + AA+ +GN ++ K +E R++ A G P ++ ++ G
Sbjct: 246 WNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEA----GVPPGVLQLLPG 301
Query: 185 FAET-GEALVSS--VDKIIFVGSPGVGRMIMRN-ASKTLTPVTL--ELGGKDAFIVCDDV 238
ET G AL + V ++F GS V R+I R A + P+ L E GG++A IV
Sbjct: 302 RGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSA 361
Query: 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 298
V + +A S+GQ C+ + D+ ++ + + + G P D+
Sbjct: 362 LAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDV 421
Query: 299 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV--NVNHTMKL 356
G + E ++ + KG + + L +G + PT+I N++
Sbjct: 422 GPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGT---FVAPTLIELENLDE---- 474
Query: 357 MQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 414
+Q E FGP++ ++++ D +EV+ N + YGL V + + + G +
Sbjct: 475 LQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYV 534
Query: 415 NDFASNYMCQSLPFGGVKDSGFGRFAG 441
N + PFGG SG G AG
Sbjct: 535 NRNIVGAVVGVQPFGGEGLSGTGPKAG 561
|
Length = 769 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 94.5 bits (235), Expect = 2e-20
Identities = 97/347 (27%), Positives = 152/347 (43%), Gaps = 34/347 (9%)
Query: 110 KVEFHPL-GVVGAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 167
+ E+ PL G V AI +N F I N A GN ++ K S+ A S RI++
Sbjct: 163 RTEYRPLEGFVYAISPFN--FTAIAGNLAGAPALMGNTVIWKPSDTAMLSNYLVMRILEE 220
Query: 168 ALAAVGAPENLVDVITG-FAETGEALVSSVD--KIIFVGSPGV----GRMIMRNASK--T 218
A G P +++ + G + +++ D I F GS + + +N +
Sbjct: 221 A----GLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVAQNLDRYHN 276
Query: 219 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 278
+ E GGKD +V DV HV +R A + GQ C+ R YV ++ F +
Sbjct: 277 FPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHSLWPRFKGR 336
Query: 279 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA--EILARGSFGHLSEG 336
+ + V G P MGA+ + K+ + A + ILA G + S G
Sbjct: 337 LLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGKYDD-SVG 395
Query: 337 AVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLA-NDSRYGLGCAV 392
YF PTV+ + + LM+EE FGP++ + + D +E++ L + + YGL AV
Sbjct: 396 ----YFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDSTTSYGLTGAV 451
Query: 393 FSGSQHRAREIAAQIQCGVAA----INDFASNYMCQSLPFGGVKDSG 435
F ++ R + A AA IND + + PFGG + SG
Sbjct: 452 F--AKDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASG 496
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 93.7 bits (234), Expect = 5e-20
Identities = 101/438 (23%), Positives = 183/438 (41%), Gaps = 70/438 (15%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
+V++ +A AR A W+++ ++R L + ++ + + R+ GKT+ DA
Sbjct: 583 DAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAELIALCVREAGKTLQDA 642
Query: 71 SLGEIMTTCEKITW----------LLSEGEKWLKP-----EYRSSGRSMIHKKAKVEFHP 115
+ E+ E + + L EK P E R GR
Sbjct: 643 -IAEVR---EAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGR------------- 685
Query: 116 LGVVGAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 174
GV I WN+P IF + AA+ +GN ++ K +E ++ A G
Sbjct: 686 -GVFVCISPWNFPL-AIFLGQVAAALAAGNTVIAKPAEQTPLIA---AEAVKLLHEA-GI 739
Query: 175 PENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRN-ASKTLTPVTL--ELGG 228
P++++ ++ G A G AL + + + F GS R+I R A++ V L E GG
Sbjct: 740 PKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGG 799
Query: 229 KDAFI---------VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 279
++A I V DDV V +A +S+GQ C+ +V DI + +
Sbjct: 800 QNAMIVDSTALPEQVVDDV---------VTSAFRSAGQRCSALRVLFVQEDIADRVIEML 850
Query: 280 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD 339
+ + G P D+G + E L + + + + A +LA+ L G +
Sbjct: 851 KGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHI-ERMKREARLLAQLP---LPAGTEN 906
Query: 340 QYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE--EVVKLANDSRYGLGCAVFSGSQ 397
+F ++ + ++ E FGPI+ ++++ + +V+ N + YGL + S +
Sbjct: 907 GHFVAPTAFEIDS-ISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIE 965
Query: 398 HRAREIAAQIQCGVAAIN 415
A IA +++ G +N
Sbjct: 966 ETADRIADRVRVGNVYVN 983
|
Length = 1038 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 84.5 bits (210), Expect = 4e-17
Identities = 110/465 (23%), Positives = 192/465 (41%), Gaps = 85/465 (18%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
S +V+ +A A+ A W+ + +R L + H + ++ R+ GKT+ +A
Sbjct: 588 SAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTLANA 647
Query: 71 SLGEIMTTCEKITWL---LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 127
+ E+ E + +L ++ + L PLG V I WN+
Sbjct: 648 -IAEVR---EAVDFLRYYAAQARRLLNGPGHK---------------PLGPVVCISPWNF 688
Query: 128 PFHNIFNPMLAAVF-SGNGIVIKVSENASWSGCFYFRIIQAALA-----AVGAPENLVDV 181
P IF +AA +GN ++ K +E +I AA A G P++ + +
Sbjct: 689 PL-AIFTGQIAAALVAGNTVLAKPAEQTP--------LI-AARAVRLLHEAGVPKDALQL 738
Query: 182 ITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT-PVTL--ELGGKDAFIVC 235
+ G T G ALV+ + ++F GS V R+I R +K PV L E GG++A IV
Sbjct: 739 LPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQNAMIV- 797
Query: 236 DDVDVP-HVAQIAVRAALQSSGQNCAGAER-FYVHRDIYALFVSQVAKIVKSVSAGPPLA 293
D +P V + +A S+GQ C+ A R + D+ ++ + + + G P
Sbjct: 798 DSSALPEQVVADVIASAFDSAGQRCS-ALRVLCLQEDVADRVLTMLKGAMDELRIGDPWR 856
Query: 294 GKYDMG------AL-CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 346
D+G A + H E ++ ++ + +E + PT+
Sbjct: 857 LSTDVGPVIDAEAQANIEAHIEAMRAA--------GRLVHQLPLPAETEKGT--FVAPTL 906
Query: 347 IVNVNHTMKLMQEEAFGPIMPIMKFNTDE--EVVKLANDSRYGLGCAVFSGSQHRAREIA 404
I ++ + ++ E FGP++ +++F DE V+ N + YGL + S +
Sbjct: 907 I-EIDS-ISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHVT 964
Query: 405 AQIQCG--------VAAINDFASNYMCQSLPFGGVKDSGFGRFAG 441
++I+ G + A+ PFGG SG G AG
Sbjct: 965 SRIRAGNIYVNRNIIGAV--------VGVQPFGGEGLSGTGPKAG 1001
|
Length = 1208 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 76.9 bits (189), Expect = 5e-15
Identities = 70/375 (18%), Positives = 132/375 (35%), Gaps = 35/375 (9%)
Query: 22 ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK 81
A + K + + +R FL +++ + I + TGK I +
Sbjct: 8 ADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKG--WMFAENICGDQVQ 65
Query: 82 ITWLLSEGEKWLKP----EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML 137
+ + P + G ++ P G V I ++N+P +
Sbjct: 66 LRARAFVIYSYRIPHEPGNHLGQGLKQ---QSHGYRWPYGPVLVIGAFNFPLWIPLLQLA 122
Query: 138 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--S 195
A+ GN +++K S R++ A P V +I G +T +AL+ +
Sbjct: 123 GALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLL---PPEDVTLINGDGKTMQALLLHPN 179
Query: 196 VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVD-VPHVAQIAVRAALQS 254
++F GS V + +A + + LEL G + ++ D V +VA V+
Sbjct: 180 PKMVLFTGSSRVAEKLALDAKQA--RIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTAC 237
Query: 255 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314
SGQ C +V + +V+ + A LA + L + ++
Sbjct: 238 SGQKCTAQSMLFVPEN------WSKTPLVEKLKA--LLARRKLEDLLLGPVQTFTTLAMI 289
Query: 315 NDA-LDKGAEILARGSFGHLSE-----GAVDQYFPPTVIVN--VNHTMKLMQEEAFGPIM 366
G+ +L G GA + + T +L+ EE FGP
Sbjct: 290 AHMENLLGSVLLFSGKELKNHSIPSIYGACVA--SALFVPIDEILKTYELVTEEIFGPFA 347
Query: 367 PIMKFNTDEEVVKLA 381
++++ D+ + L
Sbjct: 348 IVVEYKKDQLALVLE 362
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 76.8 bits (189), Expect = 9e-15
Identities = 91/419 (21%), Positives = 156/419 (37%), Gaps = 44/419 (10%)
Query: 14 EVDERVAQAR-KAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----- 67
+V VA AR +F +R + L+ L +Y+ E +E + +++ TG T
Sbjct: 37 DVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALYALAA-TTGATRRDNWV 95
Query: 68 -VDASLGEIMTTCEKITWLLSEGEKWLKPEY-----RSS--GRSMIHKKAKVEFHPLGVV 119
+D +G + T L + + E+ S GR ++ K V
Sbjct: 96 DIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQ----- 150
Query: 120 GAIVSWNYPFHNIFNPMLAAVFSGNGIVIK-VSENASWSGCFYFRIIQAALAAVGAPENL 178
I ++N+P + A +G + K + A + ++++ L PE
Sbjct: 151 --INAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLL----PEGS 204
Query: 179 VDVITGFAETGEAL--VSSVDKIIFVGSPGVGRMIMR--NASKTLTPVTLELGGKDAFIV 234
+ +I G A G+ L + D + F GS + N + E +A I+
Sbjct: 205 LQLICGSA--GDLLDHLDHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAIL 262
Query: 235 CDDV--DVPHVAQIA---VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 289
+D D P A VR +GQ C R V + + + + + V G
Sbjct: 263 GEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLG 322
Query: 290 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 349
P DMG L LE ++ V L GAE+ G +GA +FPPT+++
Sbjct: 323 DPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGP--GRLDGA---FFPPTLLLA 377
Query: 350 VN-HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 407
+ + EAFGP+ + E +LA L + + AR+ +
Sbjct: 378 EDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGL 436
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 71.1 bits (175), Expect = 3e-13
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 13 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 72
A VD+ VA A+ AQK + K + R + + + + ++ + E + E++ +TG V+ +
Sbjct: 4 ATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDKI 63
Query: 73 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 132
+ EK + G + L S + VE+ P GV+GAI P I
Sbjct: 64 AKNHLAAEK-----TPGTEDLTTTAWSGDNGL----TLVEYAPFGVIGAITPSTNPTETI 114
Query: 133 FN---PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI-TGFAET 188
N MLAA GN +V A + +I A+A G P+NLV + ET
Sbjct: 115 INNSISMLAA---GNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTIET 171
Query: 189 GEALVS--SVDKIIFVGSPGVGRMIMRNASK 217
L++ ++ ++ G P V + + + K
Sbjct: 172 TNELMAHPDINLLVVTGGPAVVKAALSSGKK 202
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 1e-10
Identities = 95/360 (26%), Positives = 156/360 (43%), Gaps = 62/360 (17%)
Query: 115 PLGVVGAIVSWNYPFHNIFNPMLAAVF-SGNGIVIKVSENASWSGCFYFRIIQAALAAVG 173
PLG V I WN+P IF +AA +GN ++ K +E RI+ A G
Sbjct: 768 PLGPVVCISPWNFPL-AIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEA----G 822
Query: 174 APENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTL------TPVTL 224
P +V ++ G ET G ALV+ V ++F GS V R++ RN + L P+
Sbjct: 823 VPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIA 882
Query: 225 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 284
E GG++A IV V + +A S+GQ C+ + D+ + K+++
Sbjct: 883 ETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDV----ADRTLKMLR 938
Query: 285 SVSAGPPLAGKYDMGAL--CLLEHSEKLQNLVNDALDKGAE------ILARGSFGH---- 332
GA+ C + + ++L + +D A+ I A + G
Sbjct: 939 --------------GAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQ 984
Query: 333 --LSEGAVDQ---YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE--EVVKLANDSR 385
Q + PPT+I ++ +L + E FGP++ ++++N ++ E+++ N S
Sbjct: 985 AARENSEDWQSGTFVPPTLI-ELDSFDEL-KREVFGPVLHVVRYNRNQLDELIEQINASG 1042
Query: 386 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL----PFGGVKDSGFGRFAG 441
YGL V + R E AQ+ N + + M ++ PFGG SG G AG
Sbjct: 1043 YGLTLGVHT----RIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAG 1098
|
Length = 1318 |
| >gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 2e-10
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 13 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 72
A VD+ VA A+ AQ+ + + S R++ + + + ++ H E + E++ +TG V+ +
Sbjct: 36 ASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI 95
Query: 73 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 132
+ + EK + G + L E + + +E+ P GV+GA+ P I
Sbjct: 96 AKNVAAAEK-----TPGVEDLTTEALTGDNGL----TLIEYAPFGVIGAVTPSTNPTETI 146
Query: 133 FN---PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI-TGFAET 188
N MLAA GN +V A ++ A+ A G PENLV + ET
Sbjct: 147 INNAISMLAA---GNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLVVTVAEPTIET 203
Query: 189 GEALVS--SVDKIIFVGSPGVGRMIMRNASK 217
+ L+ + ++ G P V + M++ K
Sbjct: 204 AQRLMKHPGIALLVVTGGPAVVKAAMKSGKK 234
|
Length = 465 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 1e-08
Identities = 66/275 (24%), Positives = 113/275 (41%), Gaps = 27/275 (9%)
Query: 115 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 174
P G V I +N+P ++ A+F GN ++KV S + R+ L G
Sbjct: 142 PYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRL----LHLCGM 197
Query: 175 PENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 232
P VD+I T ++ + +F GS V R A + V LE G D
Sbjct: 198 PATDVDLIHSDGPTMNKILLEANPRMTLFTGSSKVAE---RLALELHGKVKLEDAGFDWK 254
Query: 233 IVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKI-----VKS 285
I+ DV DV +VA + A SGQ C+ + H + + A + ++ + ++
Sbjct: 255 ILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED 314
Query: 286 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS----FGHLSEGAVDQY 341
++ GP L + +L+H +KL + + G + L S +G AV
Sbjct: 315 LTIGPVLT--WTTER--ILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAV--- 367
Query: 342 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEE 376
F P + + +L+ E FGP + ++ ++
Sbjct: 368 FVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQL 402
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 1e-08
Identities = 91/423 (21%), Positives = 158/423 (37%), Gaps = 46/423 (10%)
Query: 15 VDERVAQAR-KAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL- 72
VA AR K +F +R L+ L KY++E +E + +S+ TG T D+ +
Sbjct: 38 FAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDLYALSAA-TGATRRDSWID 96
Query: 73 --GEIMT--TCEKITWLLSEGEKWL---KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSW 125
G I T + +L E S + + + GV I ++
Sbjct: 97 IDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRR--GVAVHINAF 154
Query: 126 NYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA----PENL 178
N+P + F P L A G +++K + ++ + +A + + PE
Sbjct: 155 NFPVWGMLEKFAPALLA---GVPVIVKPATATAY-------LTEAVVKDIVESGLLPEGA 204
Query: 179 VDVITGFAETGEAL--VSSVDKIIFVGSPGVGRMIMRNAS--KTLTPVTLELGGKDAFIV 234
+ +I G G+ L + D + F GS + + + E +A I+
Sbjct: 205 LQLICG--SVGDLLDHLGEQDVVAFTGSAATAAKLRAHPNIVARSIRFNAEADSLNAAIL 262
Query: 235 CDDV--DVPHVAQIA---VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 289
D P R +GQ C R +V + + + V G
Sbjct: 263 GPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVG 322
Query: 290 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ---YFPPTV 346
P MG L E E ++ V L AE++ G GA + +FPPT+
Sbjct: 323 DPRLEGVRMGPLVSREQREDVRAAV-ATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTL 381
Query: 347 IV--NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIA 404
++ + + + EAFGP+ +M +++ E ++LA R L +V + ARE+
Sbjct: 382 LLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELV 441
Query: 405 AQI 407
Sbjct: 442 LGA 444
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 53.7 bits (130), Expect = 1e-07
Identities = 96/420 (22%), Positives = 145/420 (34%), Gaps = 100/420 (23%)
Query: 15 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL-G 73
VD A A A + + S +R FL + I + + + +TG + +A L G
Sbjct: 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETG--LPEARLQG 58
Query: 74 EIMTTCEKITW---LLSEGEKWL-----------KPEYRSSGRSMIHKKAKVEFHPLGVV 119
E+ T ++ L+ EG WL +P R R M PLG V
Sbjct: 59 ELGRTTGQLRLFADLVREGS-WLDARIDPADPDRQPLPRPDLRRM--------LVPLGPV 109
Query: 120 GAIVSWNYPFHNIFNPM-------LAAVFSGNGIVIK-------VSENASWSGCFYFRII 165
+ N+P F+ LAA G +V+K SE R I
Sbjct: 110 AVFGASNFPL--AFSVAGGDTASALAA---GCPVVVKAHPAHPGTSE-------LVARAI 157
Query: 166 QAALAAVGAPENLVDVITGF-AETGEALVSSVDKII----FVGSPGVGRMIMRNASKTLT 220
+AAL A G P + ++ G E G ALV I F GS GR + A+
Sbjct: 158 RAALRATGLPAGVFSLLQGGGREVGVALVK--HPAIKAVGFTGSRRGGRALFDAAAARPE 215
Query: 221 --PVTLELGGKDAFIVCDDVDVPHVAQIA---VRAALQSSGQNC---------AGAERFY 266
P ELG + + IA V + +GQ C AG
Sbjct: 216 PIPFYAELGSVNPVFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPA--- 272
Query: 267 VHRDIYALFVSQVAKIVKSVSAG----PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA 322
F++ +A+ + + A P +A Y G L G
Sbjct: 273 -----GDAFIAALAEALAAAPAQTMLTPGIAEAYRQGVEALAAA-------------PGV 314
Query: 323 EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAN 382
+LA G+ A F + +QEE FGP +++++ E++ +A
Sbjct: 315 RVLAGGAAAEGGNQAAPTLFKVDAAAFLADP--ALQEEVFGPASLVVRYDDAAELLAVAE 372
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 9e-06
Identities = 93/445 (20%), Positives = 171/445 (38%), Gaps = 41/445 (9%)
Query: 33 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL---GEIMTTCEKITWLLSEG 89
++ QR L ++K + +++ +I++ ++G T D+++ G I T + G
Sbjct: 61 TYAQRAALLAAIVKVLQANRDAYYDIATANSGTTRNDSAVDIDGGIFTLGYYAKLGAALG 120
Query: 90 EKWLKP--EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV 147
+ L E G+ + V GV I ++N+P ++ A+ +G ++
Sbjct: 121 DARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVI 180
Query: 148 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGV 207
+K + +W R+++ +AA P + V+ G + + D + F GS
Sbjct: 181 VKPATATAW---LTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHLQPFDVVSFTGSAET 237
Query: 208 GRMIMRNAS--KTLTPVTLELGGKDAFIVCDDVDVPHVAQIA------VRAALQSSGQNC 259
++ + + + V +E ++ ++ D P VR SGQ C
Sbjct: 238 AAVLRSHPAVVQRSVRVNVEADSLNSALLGPD-AAPGSEAFDLFVKEVVREMTVKSGQKC 296
Query: 260 AGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 319
R +V +Y +A + + G P MG L ++ + AL
Sbjct: 297 TAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGL-AALR 355
Query: 320 KGAEILARGSFGHL--SEGAVDQYFPPTVIV--NVNHTMKLMQEEAFGPIMPIMKFNTDE 375
AE+L G L ++ AV PT++ + + + E FGP+ ++ +
Sbjct: 356 AQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDVEVFGPVATLLPYRDAA 415
Query: 376 EVVKLANDSRYGLGCAVFSGSQHRAREIAAQ----------IQCGVAAINDFASNYMCQS 425
+ LA + L +V+S A + I VAA++ N M QS
Sbjct: 416 HALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQS 475
Query: 426 LPFGGVKDSGFGRFAGVE---GLRA 447
L G GR G E GLRA
Sbjct: 476 L------HGGPGRAGGGEELGGLRA 494
|
Length = 521 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 3e-05
Identities = 51/270 (18%), Positives = 98/270 (36%), Gaps = 31/270 (11%)
Query: 15 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVD----- 69
+D+ VA A+ AQ+ + S + R + + + + +++ +TG V+
Sbjct: 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKVIK 60
Query: 70 ---ASLGEIMTTC-EKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSW 125
A+ EK +L+ E + P+GVV +I
Sbjct: 61 NHFAAEYIYNVYKDEKTCGVLTGDENGG---------------TLIIAEPIGVVASITPS 105
Query: 126 NYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 185
P + L ++ + N I+ A ++ A A GAPENL+ I
Sbjct: 106 TNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNP 165
Query: 186 A-ETGEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 242
+ E + L+ + ++ G P V ++ A + P G ++ + D+
Sbjct: 166 SIELAQRLMKFPGIGLLLATGGPAV----VKAAYSSGKPAIGVGAGNTPVVIDETADIKR 221
Query: 243 VAQIAVRAALQSSGQNCAGAERFYVHRDIY 272
Q V++ +G CA + V +Y
Sbjct: 222 AVQSIVKSKTFDNGVICASEQSVIVVDSVY 251
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 45.2 bits (108), Expect = 6e-05
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 115 PLGVVGAIVSWNYPFHN-----IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 169
P+GV+ A++ P N IF ++A + + N I+ A +I++ A
Sbjct: 95 PVGVIAALI----PSTNPTSTAIFKALIA-LKTRNAIIFSPHPRAKKCSIEAAKIMREAA 149
Query: 170 AAVGAPENLVDVIT 183
A GAPE L+ I
Sbjct: 150 VAAGAPEGLIQWIE 163
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 4e-04
Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 11/184 (5%)
Query: 92 WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 151
W KP+ ++ + K + P G+ I +P N + + A++ +GN +++K
Sbjct: 173 WEKPQGKNDPLKL---KKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPH 229
Query: 152 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGE----ALVSSVDKIIFVGSPGV 207
A ++ + L G NLV + A +V I F GS
Sbjct: 230 PGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAF 289
Query: 208 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ-IAVRAALQSSGQNCAGAERFY 266
G+ + +NA + V E G + I+ D + + +A +L SGQ C +
Sbjct: 290 GQWLEQNARQAQ--VYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLY-SGQMCTTTQAIL 346
Query: 267 VHRD 270
V RD
Sbjct: 347 VPRD 350
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 0.001
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 20/168 (11%)
Query: 256 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315
GQ C R V R + + + + V G P MGAL LE E ++ V
Sbjct: 293 GQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKV- 351
Query: 316 DALDKGAEILARGSFGHLSEGAVDQ---YFPPTVIVNVN-------HTMKLMQEEAFGPI 365
AL AEI+ G GA + +FPPT++ + H + EAFGP+
Sbjct: 352 AALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPAVHDV-----EAFGPV 406
Query: 366 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 413
+M ++ +E ++LA + L ++ + E+A ++ G A
Sbjct: 407 STLMPYDDLDEAIELAARGKGSLVASLVTAD----PEVARELVLGAAP 450
|
Length = 675 |
| >gnl|CDD|143445 cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.002
Identities = 83/373 (22%), Positives = 137/373 (36%), Gaps = 73/373 (19%)
Query: 92 WLKPEYRSSGRSMIHKKAKVEFH--PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 149
W KP+ + +M + F P GV I +P N + + A++ +GN +++K
Sbjct: 173 WEKPQGKHDPLAM-----EKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVK 227
Query: 150 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-------SVDKIIFV 202
A ++ + LA G NLV + A+T E ++ V I F
Sbjct: 228 PHPAAILPLAITVQVAREVLAEAGFDPNLVTLA---ADTPEEPIAQTLATRPEVRIIDFT 284
Query: 203 GSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 262
GS G + NA + V E G + +V D+ + + + SGQ C
Sbjct: 285 GSNAFGDWLEANARQAQ--VYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTP 342
Query: 263 ERFYVHRD---------IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 313
+ YV RD + + +A + + A P A +GA +Q+
Sbjct: 343 QNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGLLADPARAAAL-LGA---------IQS- 391
Query: 314 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ----------EEAFG 363
D L + AE G SE FP + T L++ EE FG
Sbjct: 392 -PDTLARIAEARQLGEVLLASEAVAHPEFPDARV----RTPLLLKLDASDEAAYAEERFG 446
Query: 364 PIMPIMKFNTDEEVVKLANDS---RYGLGCAVFSGS-------QHRAREIAAQIQC---- 409
PI ++ ++ + ++LA +S + V+S Q A + +
Sbjct: 447 PIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTG 506
Query: 410 GV-----AAINDF 417
GV AA +DF
Sbjct: 507 GVFVNQSAAFSDF 519
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. Length = 549 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 522 | |||
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 100.0 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.96 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.81 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.49 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.2 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.32 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 97.47 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 97.31 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 97.07 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 96.88 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 96.82 | |
| PLN02926 | 431 | histidinol dehydrogenase | 96.79 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 96.48 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 96.11 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 96.02 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 95.02 |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-101 Score=811.42 Aligned_cols=467 Identities=26% Similarity=0.432 Sum_probs=426.8
Q ss_pred CHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHccc
Q 009919 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGE 90 (522)
Q Consensus 11 ~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~ 90 (522)
...|+++++++|++||++|+++|.++|.++|++++++|++|+++|++++++|+||+..++...|+..+++.++|++++++
T Consensus 8 ~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~~ 87 (484)
T PLN02174 8 GAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQLK 87 (484)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999999999999999876799999999999999999
Q ss_pred cccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHH
Q 009919 91 KWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 170 (522)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~ 170 (522)
+|.++..........+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~---- 163 (484)
T PLN02174 88 NWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLE---- 163 (484)
T ss_pred HHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHH----
Confidence 8887654333222234467899999999999999999999999999999999999999999999999999888876
Q ss_pred hcCCCCCcEeeecCcchhhhhHhc-CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHHH
Q 009919 171 AVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR 249 (522)
Q Consensus 171 ~ag~p~g~v~vv~g~~~~~~~L~~-~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~~ 249 (522)
+ ++|+|+|++|+|+++.+..|++ .+|+|+||||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++
T Consensus 164 ~-~lp~gvv~vv~G~~~~~~~l~~~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~ 242 (484)
T PLN02174 164 Q-YLDSSAVRVVEGAVTETTALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIA 242 (484)
T ss_pred H-hCCCCEEEEEECChHHHHHHhcccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHH
Confidence 3 5999999999997777888888 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHH-HcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeecc
Q 009919 250 AAL-QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 328 (522)
Q Consensus 250 ~~~-~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG 328 (522)
++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++|||+++.+++++.++|+++ .+|+++++||
T Consensus 243 g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~GG 320 (484)
T PLN02174 243 GKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGG 320 (484)
T ss_pred HHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEECC
Confidence 999 59999999999999999999999999999999999999976 78999999999999999999997 7899999999
Q ss_pred CCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhc
Q 009919 329 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 408 (522)
Q Consensus 329 ~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~ 408 (522)
.. +..|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++
T Consensus 321 ~~-----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~ 395 (484)
T PLN02174 321 EK-----DRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVS 395 (484)
T ss_pred Cc-----CCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCC
Confidence 63 2358999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcccccccccCCCCCCCCCCCc-hHHHHHHHHH
Q 009919 409 CGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAE-NGFEFQESLV 487 (522)
Q Consensus 409 ~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~ 487 (522)
+|.|+||++..+...+.+||||+|+||+|++||.+||++||+.|+|+.++. ....+++|||+. .+.++++.++
T Consensus 396 aG~v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~------~~~~~~~~pp~~~~~~~~~~~~~ 469 (484)
T PLN02174 396 AGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSL------FGDSAVRYPPYSRGKLRLLKALV 469 (484)
T ss_pred cceEEECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEECCc------cCcccccCCCCChHHHHHHHHHH
Confidence 999999998766544678999999999999999999999999999998764 245678998865 4667777666
Q ss_pred HHHhcCcHHHHH
Q 009919 488 EALYGLNIWDRL 499 (522)
Q Consensus 488 ~~~~~~~~~~~~ 499 (522)
+ .+|+++.
T Consensus 470 ~----~~~~~~~ 477 (484)
T PLN02174 470 D----SNIFDIF 477 (484)
T ss_pred h----hchhhhh
Confidence 5 2555554
|
|
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-103 Score=758.72 Aligned_cols=455 Identities=27% Similarity=0.451 Sum_probs=427.0
Q ss_pred HHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHccccccC
Q 009919 15 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK 94 (522)
Q Consensus 15 v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~ 94 (522)
++..++++|.+|.+.++.|.+.|.++|+++.+++++|+++|.+++..|.+|+..|+...|+...++.++++.+++.+|++
T Consensus 4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~ 83 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK 83 (477)
T ss_pred HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence 45568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcCC
Q 009919 95 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 174 (522)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag~ 174 (522)
+++.+........+.+++.+|+|||++|+|||||+.+.+.++++||+|||+||+||||.+|.++..+++++.++ +
T Consensus 84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-----l 158 (477)
T KOG2456|consen 84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-----L 158 (477)
T ss_pred ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-----c
Confidence 99988777667789999999999999999999999999999999999999999999999999999999999988 7
Q ss_pred CCCcEeeecCcchhhhhHhc-CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHHHHHHH
Q 009919 175 PENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQ 253 (522)
Q Consensus 175 p~g~v~vv~g~~~~~~~L~~-~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~~~~~~ 253 (522)
|.++++||.|+.++..+|++ ++|+|+||||+.+|+.|+.+|+++++||+||||||||++|++|+|++-++++|+||++.
T Consensus 159 d~~~~~VV~Ggv~ETt~LL~~rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~ 238 (477)
T KOG2456|consen 159 DQDLIRVVNGGVPETTELLKQRFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWM 238 (477)
T ss_pred CcceEEEecCCCchHHHHHHhhccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhc
Confidence 99999999999877777777 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCCCCC
Q 009919 254 SSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL 333 (522)
Q Consensus 254 n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~ 333 (522)
|+||+|+||++|+++.+++.+|+++++..+++++ |....++.|+++|||..|++|+..++++. .+++.||.
T Consensus 239 N~GQtCvapDYiL~~k~~~~kli~alk~~l~eFY-G~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~---- 309 (477)
T KOG2456|consen 239 NSGQTCVAPDYILCSKSIQPKLIDALKSTLKEFY-GENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGE---- 309 (477)
T ss_pred cCCCeeccCCeEEecHhhhHHHHHHHHHHHHHHh-CCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCc----
Confidence 9999999999999999999999999999999996 87778899999999999999999998742 68999998
Q ss_pred CCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhccCCee
Q 009919 334 SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 413 (522)
Q Consensus 334 ~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~~G~v~ 413 (522)
.++...|++||||.|+++++++|+||+|||||||+.+++++|+|+++|+.+.+|++|+||+|.+...++.+++++|.|.
T Consensus 310 -~d~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt 388 (477)
T KOG2456|consen 310 -SDESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVT 388 (477)
T ss_pred -cchhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCee
Confidence 4677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcccccccccCCCCCCCCCC-CchHHHHHHHHHH
Q 009919 414 INDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPV-AENGFEFQESLVE 488 (522)
Q Consensus 414 IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~ 488 (522)
+||..+|.....+||||+|.||||+|||++||++|||+|+++.++++. ..-...|||| +..+..+++.+++
T Consensus 389 ~ND~i~H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~rs~~~----d~~~~~RYPP~S~~K~~~lr~~~~ 460 (477)
T KOG2456|consen 389 VNDVIMHVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLRSLGG----DKLLALRYPPYSPQKLTLLRFLLE 460 (477)
T ss_pred ecceEEEEEeeccCcCCcCccccccccccccccccccchhhhhccccc----chhhhhcCCCCChHHHHHHHHHHH
Confidence 999999988888999999999999999999999999999999887652 2233689998 4456666665553
|
|
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-101 Score=738.64 Aligned_cols=503 Identities=65% Similarity=1.068 Sum_probs=481.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+-++++|..++.|+++.+..|++||++|.+.+...|.+.|+.+.+.+.+|+|.+++..++|+||++.++.++||..+++
T Consensus 74 g~yLG~fp~~~~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmvDAs~GEIlvTlE 153 (583)
T KOG2454|consen 74 GKYLGYFPALSPTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMVDASLGEILVTLE 153 (583)
T ss_pred cceeeecccCChhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhhhhhHhHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.|.|...+.++|++|+++++.+.+..+.+++.++|+||+..|.||||||.+.+++++.||.+||++|+|-||.+.+++..
T Consensus 154 KI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~~f 233 (583)
T KOG2454|consen 154 KITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSGCF 233 (583)
T ss_pred HhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeehhh
Confidence 99999999999999999999888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
..++++.+|...|.|+++||++++-++++++|.+ .+++|.|.||..+++.|++.|+++++||++|||||+|+||++|+
T Consensus 234 y~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTPv~lELGGKDafIi~dda 313 (583)
T KOG2454|consen 234 YFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTLELGGKDAFIICDDA 313 (583)
T ss_pred HHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEEeecCcccEEEeccc
Confidence 9999999999999999999999999999999998 89999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++..+.-+++|.|..+||+|++.+|++||+++||.|+..|.++++.++.|.|....+|||+|++.+++|.++.++++|+
T Consensus 314 ~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~DAv 393 (583)
T KOG2454|consen 314 DLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVNDAV 393 (583)
T ss_pred cHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHH
Q 009919 319 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 398 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 398 (522)
++||+++.||.++-+|.++.|.|++||+|.|++++|.|++||.||||++|+.+++.|++|+++|+++|||+++||+.|.+
T Consensus 394 ~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~sVFg~dk~ 473 (583)
T KOG2454|consen 394 DKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGCSVFGGDKH 473 (583)
T ss_pred hhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCcccccceeccccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcccccccccCCCCCCCCCC--C
Q 009919 399 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPV--A 476 (522)
Q Consensus 399 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~~~~~p~--~ 476 (522)
+.+++++++++|.|.|||..++|.++ +||||++.||+|++.|.+||+..+..|+|...++ +...|.+|.++.||. +
T Consensus 474 ~c~y~a~~lqtG~vAiNDFasfY~cQ-lPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd~~-~~~~t~ip~aldypi~~s 551 (583)
T KOG2454|consen 474 RCKYIASQLQTGVVAINDFASFYMCQ-LPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYDRV-AENATEIPEALDYPIYGS 551 (583)
T ss_pred HHHHHHhhhhccceeehhhhhhheec-cccCCccCCCccccccHHHHHHHhcccceeccch-hhhhccCCccccccCcCh
Confidence 99999999999999999999999998 9999999999999999999999999999988765 345567899999997 3
Q ss_pred chHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q 009919 477 ENGFEFQESLVEALYGLNIWDRLRALVNVL 506 (522)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (522)
.+.|.|+++++...|. .|.+....+.++.
T Consensus 552 ~kaW~fvrsli~~~y~-aw~~~~snv~~l~ 580 (583)
T KOG2454|consen 552 LKAWDFVRSLIDVLYF-AWTDQSSNVSRLR 580 (583)
T ss_pred hhHHHHHHHHHHHHHH-hHhhhccHHHHHh
Confidence 5689999999988886 4555544455443
|
|
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-98 Score=791.27 Aligned_cols=464 Identities=27% Similarity=0.437 Sum_probs=424.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHc
Q 009919 9 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 88 (522)
Q Consensus 9 ~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~ 88 (522)
..+.++++++++++++|+.+|++++.++|.++|++++++|++++++|++++++|+||+..|+...|+..+++.+++++++
T Consensus 3 ~~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~ 82 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKH 82 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999878999999999999999
Q ss_pred cccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHH
Q 009919 89 GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 168 (522)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~ 168 (522)
+++|++++....+....+.+++++++|+|||++|+|||||+.+.+.++++||++||+||+|||+.+|.++.++.+++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~- 161 (493)
T PTZ00381 83 LDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTK- 161 (493)
T ss_pred HHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-
Confidence 9999887654433222345678999999999999999999999999999999999999999999999999999988774
Q ss_pred HHhcCCCCCcEeeecCcchhhhhHhc-CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHH
Q 009919 169 LAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA 247 (522)
Q Consensus 169 l~~ag~p~g~v~vv~g~~~~~~~L~~-~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i 247 (522)
++|+|++++|+|+.+.+..|++ .+|+|+||||+.+|+.|+++++++++|+++|||||||+||++|||++.|++.|
T Consensus 162 ----~lp~~~v~vv~g~~~~~~~l~~~~~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i 237 (493)
T PTZ00381 162 ----YLDPSYVRVIEGGVEVTTELLKEPFDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRI 237 (493)
T ss_pred ----hCCcCEEEEecCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHH
Confidence 3999999999997788888988 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeec
Q 009919 248 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 327 (522)
Q Consensus 248 ~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~g 327 (522)
++++|.|+||+|+|+++||||++++|+|+++|++.+++++ |++.++++++|||++.++++++.+++++ +|+++++|
T Consensus 238 ~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~~---~ga~~~~g 313 (493)
T PTZ00381 238 AWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIKD---HGGKVVYG 313 (493)
T ss_pred HHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHHh---CCCcEEEC
Confidence 9999999999999999999999999999999999999986 6666788999999999999999999963 68999999
Q ss_pred cCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHh
Q 009919 328 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 407 (522)
Q Consensus 328 G~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l 407 (522)
|.. +..+.|++|||+.+++++|++|+||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++
T Consensus 314 G~~-----~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~ 388 (493)
T PTZ00381 314 GEV-----DIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENT 388 (493)
T ss_pred CCc-----CCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhC
Confidence 972 346789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcccccccccCCCCCCCCCCCch-HHHHHHHH
Q 009919 408 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAEN-GFEFQESL 486 (522)
Q Consensus 408 ~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~ 486 (522)
++|.|+||+...+...+.+||||+|.||+|++||++||++||+.|+|+.++.+. ..+.+++|||+.. +.++++++
T Consensus 389 ~sG~v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~~~~----~~~~~~~~pp~~~~~~~~~~~~ 464 (493)
T PTZ00381 389 SSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKSTGN----SFDLSLRYPPYTSFKSWVLSFL 464 (493)
T ss_pred CcceEEECCccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEccccc----cCcccccCCCCChHHHHHHHHH
Confidence 999999999877766678999999999999999999999999999999876321 2356789988654 45566666
Q ss_pred HHHH
Q 009919 487 VEAL 490 (522)
Q Consensus 487 ~~~~ 490 (522)
++..
T Consensus 465 ~~~~ 468 (493)
T PTZ00381 465 LKLS 468 (493)
T ss_pred HhcC
Confidence 6443
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-97 Score=793.53 Aligned_cols=448 Identities=21% Similarity=0.328 Sum_probs=414.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 139 g~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~ea~-~EV~~~i~ 217 (604)
T PLN02419 139 QEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDSH-GDIFRGLE 217 (604)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|+++.+..+.... .+. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 218 ~~~~~a~~a~~~~g~~-~~~--~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~ 294 (604)
T PLN02419 218 VVEHACGMATLQMGEY-LPN--VSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVI 294 (604)
T ss_pred HHHHHHHHHHHhhCCc-ccc--cCCCccceEEecCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHH
Confidence 9999998877664422 111 1123456889999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+++++. ++|+|+|+||+|+|+++.++.|+. ++|.|+||||+.+|+.|++.++++++|+++|||||||+||++||
T Consensus 295 l~~l~~----eAGlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~~lk~v~LELGGknp~IV~~DA 370 (604)
T PLN02419 295 LAELAM----EAGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDA 370 (604)
T ss_pred HHHHHH----HhCcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhccCCcEEEecCCCCeEEEcCCC
Confidence 877755 789999999999997778888886 99999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.+++++|.|+||.|++++|||||++ +|+|+++|+++++++++|+|.++++++|||+++++++++.++|++|+
T Consensus 371 Dld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~ 449 (604)
T PLN02419 371 NIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGV 449 (604)
T ss_pred CHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHH
Q 009919 319 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 398 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 398 (522)
++|+++++||.....+....|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 450 ~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~ 529 (604)
T PLN02419 450 DDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGA 529 (604)
T ss_pred hcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHH
Confidence 99999999997432112246899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC--CcchHHHHHhchhceEEEEcc
Q 009919 399 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 399 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G--~~~g~~~l~~ft~~k~v~~~~ 458 (522)
++.++++++++|.|+||+. .+...+.+||||+|+||+| ++||++|+++||+.|+|+...
T Consensus 530 ~a~~~a~~l~aG~V~IN~~-~~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 590 (604)
T PLN02419 530 AARKFQMDIEAGQIGINVP-IPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQ 590 (604)
T ss_pred HHHHHHHhCCeeeEEEcCC-CCCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEEEEEcc
Confidence 9999999999999999986 3333456999999999999 799999999999999998765
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-97 Score=782.22 Aligned_cols=442 Identities=29% Similarity=0.517 Sum_probs=410.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 36 g~~v~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 114 (482)
T PRK11241 36 GDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAAS 114 (482)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999985 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|++..+++..... .+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 115 ~~~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~ 191 (482)
T PRK11241 115 FIEWFAEEGKRIYGDT-IPGH--QADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALA 191 (482)
T ss_pred HHHHHHHHHHHhcCcc-cccC--CCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHHHHhCCEEEEECCCCChHHHHH
Confidence 9999987765532211 1110 112346789999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+.+++. ++|+|+|++++|+|++ +.++.|++ .+|.|+||||+++|+.|++.++++++|+++|||||||+||++|
T Consensus 192 l~~~~~----~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~~l~~~~lElGGknp~IV~~d 267 (482)
T PRK11241 192 LAELAI----RAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDD 267 (482)
T ss_pred HHHHHH----HcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeEEEcCC
Confidence 877655 7899999999999965 67888887 7999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++.++|+++
T Consensus 268 ADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a 347 (482)
T PRK11241 268 ADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADA 347 (482)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||... ..+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 348 ~~~Ga~vl~GG~~~----~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~aN~s~~GL~a~Vft~d~ 423 (482)
T PRK11241 348 LEKGARVVCGGKAH----ELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDL 423 (482)
T ss_pred HhCCCEEEecCCCC----CCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHHhhCCCCCceEEEEcCCH
Confidence 99999999999731 13589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
++++++++++++|+|+||++... .+.+||||+|.||+|++||.+|+++||+.|+|+.
T Consensus 424 ~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~ 480 (482)
T PRK11241 424 SRVFRVGEALEYGIVGINTGIIS--NEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI 480 (482)
T ss_pred HHHHHHHHHcCccEEEECCCCCC--CCCCCcCCccccccCcccHHHHHHHhhcceEEEE
Confidence 99999999999999999987553 3358999999999999999999999999999864
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-96 Score=773.16 Aligned_cols=442 Identities=35% Similarity=0.583 Sum_probs=414.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++..+.+++++++++|+.|+..|++++..+|.++|++++++|+++.++|++++++|+||++.+++ .|+..+++
T Consensus 24 g~~i~~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela~~~~~e~Gk~i~ea~-~ei~~~~~ 102 (472)
T COG1012 24 GEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAALITLETGKPISEAR-GEIARAAD 102 (472)
T ss_pred CCEEeeecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999996 57999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|+++.++++.... .+.+. ....+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 103 ~~~~~a~~~~~~~~~~-~~~~~---~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apALaaGntVV~KPse~tp~sa~~ 178 (472)
T COG1012 103 FIRYYAEEARRLEGET-IPTDK---GSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALA 178 (472)
T ss_pred HHHHHHHHHHHhcCCc-cCCCC---CcceEEEeecceEEEEECCCCCHHHHHHhhHHHHHHcCCEEEEECcccCcHHHHH
Confidence 9999999988765543 33221 4678999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++. ++|+|+|++|+|+|++ +.+++|+. ++|+|.||||+++|+.|++.+++++||+++|||||||+||++|
T Consensus 179 l~~~~~----~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~~~k~~~lELGGk~p~IV~~d 254 (472)
T COG1012 179 LAELAA----EAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPVTLELGGKSPAIVLED 254 (472)
T ss_pred HHHHHH----HhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhhcCCcEEEECCCCCCeEECCC
Confidence 888765 6789999999999964 67899988 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHh-ccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~-~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
||++.|++.+++|+|.|+||.|++++|+|||+++||+|+++|.++ ++ +++|++.++++++|||+++++++++.++|++
T Consensus 255 Adl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~~Gpli~~~~~~~v~~~i~~ 333 (472)
T COG1012 255 ADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTDLGPLISEEQLDRVEGYIED 333 (472)
T ss_pred CCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCccCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999 65 8999878899999999999999999999999
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
++++|++++.||.. .. |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 334 a~~~G~~~~~Gg~~-----~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lAN~t~yGL~a~v~t~d 407 (472)
T COG1012 334 AVAEGARLLAGGKR-----PG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRD 407 (472)
T ss_pred HHHcCCEEEeCCcC-----CC-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 99999999998872 12 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
..++.++++++++|+|+||+...+.....+||||+|.||+|+++|.+++++|++.|+|....
T Consensus 408 ~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~ 469 (472)
T COG1012 408 LARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKL 469 (472)
T ss_pred HHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEec
Confidence 99999999999999999999865455667999999999999999999999999999997654
|
|
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-95 Score=766.08 Aligned_cols=443 Identities=28% Similarity=0.507 Sum_probs=412.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.++++++++.|++|++.|++++.++|.++|++++++|++++++|+++++.|+||+..++. .|+..+++
T Consensus 17 ~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 95 (462)
T PRK13968 17 GEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQAR-AEVAKSAN 95 (462)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999985 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|++..+.+++...... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~tp~~~~~ 171 (462)
T PRK13968 96 LCDWYAEHGPAMLKAEPTL----VENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQL 171 (462)
T ss_pred HHHHHHHHHHHhhCCcccc----CCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHH
Confidence 9999999887776543221 123566899999999999999999999999999999999999999999999999987
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+.+++. ++|+|+|++++|+|+.+.+..|+. .+|.|+||||+++|+.|++.++++++|+++|||||||+||++||
T Consensus 172 l~~~~~----~aGlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGGk~p~iV~~dA 247 (462)
T PRK13968 172 IAQVFK----DAGIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDA 247 (462)
T ss_pred HHHHHH----HcCcCcCcEEEEecCchhhHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCCCCceEECCCC
Confidence 776654 789999999999986655555665 89999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.+++++|.|+||.|+++++||||++++|+|++.|+++++++++|+|.++++++||+++..+++++.+++++++
T Consensus 248 dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 327 (462)
T PRK13968 248 DLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEATL 327 (462)
T ss_pred CHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHH
Q 009919 319 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 398 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 398 (522)
.+|+++++||... ...|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 328 ~~Ga~vl~gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d~~ 403 (462)
T PRK13968 328 AEGARLLLGGEKI----AGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDET 403 (462)
T ss_pred HCCCEEEeCCCcC----CCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCCHH
Confidence 9999999999742 125789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 399 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 399 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
.++++++++++|+|+||+... ..+.+||||+|.||+|+++|++||++||+.|+|+..+
T Consensus 404 ~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~ 461 (462)
T PRK13968 404 QARQMAARLECGGVFINGYCA--SDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKDR 461 (462)
T ss_pred HHHHHHHhCCcceEEECCCCC--CCCCCCCCCccccccCcCchHHHHHHhcceeEEEEec
Confidence 999999999999999998743 3456899999999999999999999999999997643
|
|
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-95 Score=763.92 Aligned_cols=444 Identities=27% Similarity=0.495 Sum_probs=413.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+++++++++|++|+..|+.++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 11 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 89 (457)
T PRK09406 11 GETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAK-AEALKCAK 89 (457)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999985 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.+++++......... ......+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~ 168 (457)
T PRK09406 90 GFRYYAEHAEALLADEPADAAA-VGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALY 168 (457)
T ss_pred HHHHHHHHHHHHhCCccccccC-CCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHH
Confidence 9999999888876543221111 123456889999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+.+++. ++|+|+|+|++|+++.+.+..|+. ++|+|+||||+.+|+.|++.+++++||+++|+|||||+||++||
T Consensus 169 l~~l~~----~aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~~~iV~~da 244 (457)
T PRK09406 169 LADLFR----RAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFIVMPSA 244 (457)
T ss_pred HHHHHH----HhCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCCeeEECCCC
Confidence 877755 789999999999865566777886 99999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++
T Consensus 245 dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 324 (457)
T PRK09406 245 DLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAV 324 (457)
T ss_pred CHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHH
Q 009919 319 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 398 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 398 (522)
++|+++++||... ...|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+
T Consensus 325 ~~Ga~~l~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~ 400 (457)
T PRK09406 325 AAGATILCGGKRP----DGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEA 400 (457)
T ss_pred HCCCEEEeCCCcC----CCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHH
Confidence 9999999999742 236899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 399 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 399 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
.++++++++++|+|+||++... .+.+||||+|.||+|++||++++++||+.|+|..
T Consensus 401 ~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 401 EQERFIDDLEAGQVFINGMTVS--YPELPFGGVKRSGYGRELSAHGIREFCNIKTVWI 456 (457)
T ss_pred HHHHHHHhCCcceEEECCCCCC--CCCCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence 9999999999999999997653 3469999999999999999999999999999864
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-96 Score=737.36 Aligned_cols=443 Identities=31% Similarity=0.504 Sum_probs=415.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH--HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~--~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
||++++|+..+.+|++.++++|++||+ .|++++..+|.++|+++++++++++++|+...+.|.|||..+++..++..+
T Consensus 46 g~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~~lA~~E~~d~GKp~~~a~~~Dl~~~ 125 (501)
T KOG2450|consen 46 GEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDADVLAALEVLDNGKPYPEALVSDLPPA 125 (501)
T ss_pred CCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhHHHhhhcccccCCcchhhhhcCchhh
Confidence 689999999999999999999999999 699999999999999999999999999999999999999999987899999
Q ss_pred HHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++.++|++..+.+.- ....+.. ...-.|.+++|+|||+.|.|||||+....|++++||++||+||+||++++|.|+
T Consensus 126 ~~~~ry~ag~ad~~~-~~~~~~~---~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~tplsa 201 (501)
T KOG2450|consen 126 IDCFRYYAGWADKIH-GSTIPTD---GEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLTA 201 (501)
T ss_pred hhHHHhhccchhhcc-cccCCCC---CceEEEecCCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCCCCchH
Confidence 999999988776651 1111111 234678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhc-CCCceeeeCCCcceEEE
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK-TLTPVTLELGGKDAFIV 234 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~-~~~pv~lelgGk~p~iV 234 (522)
..++++++ ++|+|+|++|+|+|.+ +.+.+|.+ ++|+|.||||+.+|+.|++++++ ++||++||||||||.||
T Consensus 202 l~~~~l~~----eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~~n~K~vtLElGGKsp~Iv 277 (501)
T KOG2450|consen 202 LYLASLCK----EAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAESNLKPVTLELGGKSPIIV 277 (501)
T ss_pred HHHHHHhH----HhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhhcCCceeccccCCCCcceE
Confidence 99888766 7899999999999965 78999988 99999999999999999999885 58999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHh-ccCCCCCCCCCcccccCCHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSAGPPLAGKYDMGALCLLEHSEKLQNL 313 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~-~~~g~~~~~~~~~g~li~~~~~~~~~~~ 313 (522)
++|||++.|++.++.+.|+|+||.|.+.+|+|||+++||+|++.++++.++ +++|+|.++++..||.++..|++++.++
T Consensus 278 f~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~~~qG~~i~~~q~ekI~~y 357 (501)
T KOG2450|consen 278 FDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEGTEQGPQISKTQYEKILGY 357 (501)
T ss_pred ecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCcccccccccCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999966 9999999999999999999999999999
Q ss_pred HHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEe
Q 009919 314 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 393 (522)
Q Consensus 314 i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~ 393 (522)
|+.++++||++++||.+. ...|+|+.|||+.+++++|.|++||+||||++|++|++.||+|+++|+++|||++.||
T Consensus 358 i~~~k~eGa~l~~gG~~~----g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~~AN~t~yGLAa~V~ 433 (501)
T KOG2450|consen 358 IESGKKEGATLLCGGVRL----GDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEVIERANNTTYGLAAGVF 433 (501)
T ss_pred HHHHHhcCCEEEecCccc----CCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHHHHHHhcCCcccceeeEe
Confidence 999999999999999852 3689999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 394 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 394 s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
|+|.+++.++++++++|+||||.+... .+..||||+|+||+||..|.+++++||+.|+|+.+
T Consensus 434 t~dl~~a~~va~~l~aGtVwiN~y~~~--~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~ 495 (501)
T KOG2450|consen 434 TKDLDKAHRVANALQAGTVWINCYNVF--DAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTVK 495 (501)
T ss_pred ccChHHHHHHHHHhcCceEEEeccccc--cccCCccccccccCCccccHHHHhhcceeeEEEEe
Confidence 999999999999999999999987554 34699999999999999999999999999999864
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-94 Score=765.94 Aligned_cols=442 Identities=27% Similarity=0.446 Sum_probs=409.0
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.++++++++.|++|++.|+++|.++|.++|++++++|++++++|++++++|+||+..++...|+..+++
T Consensus 26 g~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~ 105 (472)
T TIGR03374 26 GEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVD 105 (472)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999998886569999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.+++++...+... ....+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 106 ~~~~~a~~~~~~~-~~~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~ 182 (472)
T TIGR03374 106 VFRFFAGAARCLS-GLAAGE--YLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALK 182 (472)
T ss_pred HHHHHHHHHHHhc-CcccCc--cCCCceEEEEEecceEEEEECCCCchHHHHHHHHHHHHhcCCEEEecCCCCCCHHHHH
Confidence 9999887654432 111111 1123456899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++.+ ++|+|++|+|+|++ +.++.|+. .+|.|+||||+++|+.|++.++++++|+++|||||||+||++|
T Consensus 183 l~~l~~~-----~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGk~p~iV~~d 257 (472)
T TIGR03374 183 LAELAKD-----IFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKRTHMELGGKAPVIVFDD 257 (472)
T ss_pred HHHHHHH-----hCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcccceEEecCCCCeeEECCC
Confidence 9888763 39999999999964 67888986 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||++..+++++.++|+++
T Consensus 258 adl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a 337 (472)
T TIGR03374 258 ADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEA 337 (472)
T ss_pred CCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcC-CcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 318 LDKG-AEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 318 ~~~G-a~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
.++| +++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 338 ~~~G~a~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~vft~d 413 (472)
T TIGR03374 338 KALGHIKVITGGEKR----KGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKD 413 (472)
T ss_pred HHcCCeEEEeCCccC----CCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHHHHhCCCCCceEEEECCC
Confidence 9999 7999999732 2358899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
.+++.++++++++|+|+||++... .+.+||||+|+||+|++||++|+++||+.|+++.
T Consensus 414 ~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 414 VGRAHRLSARLQYGCTWVNTHFML--VSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred HHHHHHHHHhCCcceEEECCCCCC--CCCCCCCCCccCccCccchHHHHHHhhceEEEEE
Confidence 999999999999999999987543 4569999999999999999999999999999864
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-95 Score=700.81 Aligned_cols=446 Identities=32% Similarity=0.518 Sum_probs=417.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||.|+.|+..+.++.+.+++.|.+||.+|+.++..+|.++|+++.++|.+|.++|++++.+|.|||+.|+. +|+.....
T Consensus 49 geii~~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~ddLa~iiTlE~GKpL~eA~-gEv~y~a~ 127 (503)
T KOG2451|consen 49 GEIIGKVADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDDLATIITLENGKPLGEAK-GEVAYSAA 127 (503)
T ss_pred cchhhcccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHHhhhcCCchhhcc-ceeehhHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999995 89999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.+.|++..+.+...... +. ........+.++|.||+++|+|||||......+..+||++||+||+|||+.+|+++..
T Consensus 128 f~eWyAeEA~RvyGdii-~s--~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gAALAaGCTvVvkPs~~TPlsaLa 204 (503)
T KOG2451|consen 128 FFEWYAEEARRVYGDII-PS--LNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGAALAAGCTVVVKPSEDTPLSALA 204 (503)
T ss_pred HHHHHHHHhhhhhcccc-CC--CCCCceEEEEeccceeEEEecCcCChHHHHHhHHHHHHhcCceEEEccCCCCchHHHH
Confidence 99999999888655432 21 1234566789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCc----chhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEE
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGF----AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 234 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~----~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV 234 (522)
++++.. +||+|+|++|+|+++ .+.+.+|+. .+.+|.||||+.+|+.++++++..+|++.+||||+.|.||
T Consensus 205 la~lA~----~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~qsastvKkvslELGGNAPfIV 280 (503)
T KOG2451|consen 205 LAKLAE----EAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMAQSASTVKKVSLELGGNAPFIV 280 (503)
T ss_pred HHHHHH----HcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHHhhhhhhhheehhhcCCCceEE
Confidence 998765 799999999999974 267889987 9999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i 314 (522)
++|||||.|++.....+|.|+||+|.+++|+|||++|||+|+..|.++++++++|+..++++..||+||+.+.++++.++
T Consensus 281 Fddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~~~~tt~GpLIne~av~Kve~~v 360 (503)
T KOG2451|consen 281 FDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGLDPGTTQGPLINEKAVEKVEKHV 360 (503)
T ss_pred ecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCCCCCCccCCccCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEec
Q 009919 315 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 394 (522)
Q Consensus 315 ~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s 394 (522)
+||+++|+++++||...+ .-...|++|||+.+++.+|-+..||+|||+.+|++|+|.||+|+++|+++.||+.|+||
T Consensus 361 ~DAvsKga~ii~GGk~~~---~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdteeEvi~~ANdt~vGLAgYvfs 437 (503)
T KOG2451|consen 361 EDAVSKGAKIILGGKERS---ELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEEEVIEWANDTRVGLAGYVFS 437 (503)
T ss_pred HHHHhcCCeEEeCCeEcc---ccCCccccceEeecCCccceeeccccccccceeeeeCCHHHHHHHhccCccceeeEEec
Confidence 999999999999998432 23568999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEccc
Q 009919 395 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 459 (522)
Q Consensus 395 ~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~ 459 (522)
+|..+..+++++|++|+|.+|.-.... ...||||+|+||+||+++++|+++|+..|.+....+
T Consensus 438 ~~~s~~~rVae~LEvGmVGvNeglis~--~~~pFGGVKeSG~GREgskyGidey~~ik~icig~L 500 (503)
T KOG2451|consen 438 NNLSRLFRVAEALEVGMVGVNEGLISD--AEAPFGGVKESGFGREGSKYGIDEYLVIKYICIGTL 500 (503)
T ss_pred cCHHHHHHHHHHHhcceeecccceecc--cccCcCCccccccCccccccchhhhhhhheeeecCc
Confidence 999999999999999999999865543 458999999999999999999999999999987554
|
|
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-94 Score=761.63 Aligned_cols=461 Identities=29% Similarity=0.446 Sum_probs=420.0
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHcc
Q 009919 10 LSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEG 89 (522)
Q Consensus 10 ~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~ 89 (522)
+..+++++++++|++|++.|+.++..+|.++|++++++|++++++|+++++.|+||+..++...|+..+++.++++++++
T Consensus 3 ~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~~ 82 (484)
T PLN02203 3 APGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSNL 82 (484)
T ss_pred CCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999986679999999999999988
Q ss_pred ccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHH
Q 009919 90 EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 169 (522)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l 169 (522)
+++..+.....+....+..+++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++.+++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~-- 160 (484)
T PLN02203 83 KKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPK-- 160 (484)
T ss_pred HHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH--
Confidence 888665321111111234678999999999999999999999999999999999999999999999999998888764
Q ss_pred HhcCCCCCcEeeecCcchhhhhHhc-CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC---CCCHHHHHH
Q 009919 170 AAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD---DVDVPHVAQ 245 (522)
Q Consensus 170 ~~ag~p~g~v~vv~g~~~~~~~L~~-~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~---daDl~~aa~ 245 (522)
++|+|+||+|+|+.+.++.|+. .+|.|+||||+.+|+.|++.++++++|+++|||||||+||++ |||++.|++
T Consensus 161 ---~lP~gvv~vv~g~~~~~~~l~~~~vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa~ 237 (484)
T PLN02203 161 ---YLDSKAVKVIEGGPAVGEQLLQHKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVN 237 (484)
T ss_pred ---hCCcCEEEEEeCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHHH
Confidence 3999999999997788899988 899999999999999999999999999999999999999997 699999999
Q ss_pred HHHHHHHH-cCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcE
Q 009919 246 IAVRAALQ-SSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEI 324 (522)
Q Consensus 246 ~i~~~~~~-n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v 324 (522)
.+++++|. |+||.|++++|+|||++++|+|+++|+++++++++|+|.++ .++||++++++++++.++|++++++ +++
T Consensus 238 ~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~~ 315 (484)
T PLN02203 238 RIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-ASI 315 (484)
T ss_pred HHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-CeE
Confidence 99999996 89999999999999999999999999999999999999875 6899999999999999999999876 789
Q ss_pred eeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHH
Q 009919 325 LARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIA 404 (522)
Q Consensus 325 ~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~ 404 (522)
++||.. +..|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.+++
T Consensus 316 ~~gg~~-----~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~ 390 (484)
T PLN02203 316 VHGGSI-----DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRIL 390 (484)
T ss_pred EeCCCc-----CCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 999862 246899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcccccccccCCCCCCCCCCCch-HHHHH
Q 009919 405 AQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAEN-GFEFQ 483 (522)
Q Consensus 405 ~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~ 483 (522)
+++++|.|+||++..+...+.+||||+|+||+|++||++|+++||+.|+|+..+. ....+++|||+.. +.+++
T Consensus 391 ~~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~~------~~~~~~~~~p~~~~~~~~~ 464 (484)
T PLN02203 391 SETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRSL------LTEFEFRYPPWNDFKLGFL 464 (484)
T ss_pred HhCCcceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcCc------cCcccccCCCCChHHHHHH
Confidence 9999999999998665555679999999999999999999999999999987753 2356678887554 77777
Q ss_pred HHHHH
Q 009919 484 ESLVE 488 (522)
Q Consensus 484 ~~~~~ 488 (522)
+.+++
T Consensus 465 ~~~~~ 469 (484)
T PLN02203 465 RLVYR 469 (484)
T ss_pred HHHHh
Confidence 77766
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-95 Score=770.90 Aligned_cols=445 Identities=31% Similarity=0.515 Sum_probs=412.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH--HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~--~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
|+++++++.++.++++++++.|++||+ .|+.+|.++|.++|++++++|++++++|++++++|+||+..++...|+..+
T Consensus 46 g~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~ 125 (501)
T PLN02766 46 GEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAA 125 (501)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 689999999999999999999999997 599999999999999999999999999999999999999998866799999
Q ss_pred HHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++.+++++..++++.. +..... .....+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 126 ~~~l~~~a~~~~~~~g-~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~ 201 (501)
T PLN02766 126 AGLLRYYAGAADKIHG-ETLKMS---RQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSA 201 (501)
T ss_pred HHHHHHHHHHHHHhcC-ceeccC---CCceEEEEeccceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHH
Confidence 9999999987766533 211111 123467889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHh-cCCCceeeeCCCcceEEE
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELGGKDAFIV 234 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa-~~~~pv~lelgGk~p~iV 234 (522)
.++.+++. ++|+|+|++|+|+|++ +.++.|++ ++|.|+||||+.+|+.|++.++ ++++|+++|||||||+||
T Consensus 202 ~~l~~~~~----~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~l~~~~lElGGknp~iV 277 (501)
T PLN02766 202 LFYAHLAK----LAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLI 277 (501)
T ss_pred HHHHHHHH----hcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhhcCCCeEEEECCCCCeEEE
Confidence 88877754 7899999999999965 67888887 8999999999999999999999 599999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i 314 (522)
++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++|
T Consensus 278 ~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i 357 (501)
T PLN02766 278 FDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYI 357 (501)
T ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEec
Q 009919 315 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 394 (522)
Q Consensus 315 ~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s 394 (522)
++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 358 ~~a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~deai~~aN~~~~GL~a~Vft 433 (501)
T PLN02766 358 EHGKREGATLLTGGKPC----GDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVT 433 (501)
T ss_pred HHHHhCCCEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999732 23688999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEccc
Q 009919 395 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 459 (522)
Q Consensus 395 ~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~ 459 (522)
+|.+++.++++++++|+|+||++.. ..+.+||||+|+||+|++||++|+++||+.|+|+...+
T Consensus 434 ~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~~ 496 (501)
T PLN02766 434 KDLDVANTVSRSIRAGTIWVNCYFA--FDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPLY 496 (501)
T ss_pred CCHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEecc
Confidence 9999999999999999999998654 34568999999999999999999999999999987543
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-94 Score=763.29 Aligned_cols=445 Identities=28% Similarity=0.463 Sum_probs=408.6
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH--HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~--~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
|+++++++.++.+++++++++|++||. .|+++|.++|.++|++++++|++++++|++++++|+||+..++...|+..+
T Consensus 31 g~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~ 110 (486)
T cd07140 31 GSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMS 110 (486)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 689999999999999999999999998 599999999999999999999999999999999999999999865799999
Q ss_pred HHHHHHHHHccccccCcccccCCcc-cccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRS-MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 157 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~ 157 (522)
++.+++++...++.... ..+.... ......+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 111 ~~~l~~~a~~~~~~~g~-~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~ 189 (486)
T cd07140 111 IQTFRYFAGWCDKIQGK-TIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLT 189 (486)
T ss_pred HHHHHHHHHHHHHhcCc-cccccccCCCCceEEEEeeccceEEEEcCCchHHHHHHHHHHHHHHhCCEEEEECCccCcHH
Confidence 99999998776554321 1111100 011235788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhc-CCCceeeeCCCcceEE
Q 009919 158 GCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK-TLTPVTLELGGKDAFI 233 (522)
Q Consensus 158 ~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~-~~~pv~lelgGk~p~i 233 (522)
+..+.+++. ++|+|+|++++|+|++ +.++.|+. .+|.|+||||+.+|+.|++.+++ +++|+++|||||||+|
T Consensus 190 ~~~l~~~~~----~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~l~~v~lElGGk~~~i 265 (486)
T cd07140 190 ALKFAELTV----KAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLI 265 (486)
T ss_pred HHHHHHHHH----HcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCCeEEEEcCCCCceE
Confidence 988877654 7899999999999965 56888887 79999999999999999999996 9999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHH
Q 009919 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 313 (522)
Q Consensus 234 V~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~ 313 (522)
|++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++|||+++++++++.++
T Consensus 266 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~ 345 (486)
T cd07140 266 IFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEY 345 (486)
T ss_pred ECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCCCCCcCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecC--CHHHHHHHHhcCCCCceeE
Q 009919 314 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVVKLANDSRYGLGCA 391 (522)
Q Consensus 314 i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gL~a~ 391 (522)
|++++++|+++++||... +..|+|++|||+.+++++|.+++||+||||++|++|+ |++|||+++|+++|||++|
T Consensus 346 i~~a~~~Ga~vl~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~aN~~~~gL~a~ 421 (486)
T cd07140 346 CERGVKEGATLVYGGKQV----DRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASG 421 (486)
T ss_pred HHHHHHCCCEEEeCCCCC----CCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCCHHHHHHHHhCCCcCceEE
Confidence 999999999999999742 2468999999999999999999999999999999998 6999999999999999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 392 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 392 v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
|||+|.++++++++++++|.|+||++.. ..+.+||||+|+||+|++||++||++||+.|+|+.
T Consensus 422 vft~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~ 484 (486)
T cd07140 422 VFTKDINKALYVSDKLEAGTVFVNTYNK--TDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTVTI 484 (486)
T ss_pred EECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCcccCcCCCcchHHHHHHhhcEEEEEE
Confidence 9999999999999999999999999644 23468999999999999999999999999999875
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-94 Score=762.81 Aligned_cols=447 Identities=23% Similarity=0.371 Sum_probs=413.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|++++.++|.++|++++++|+++.++|+++++.|+||+..++. +|+..+++
T Consensus 44 ~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~GK~~~~a~-~ev~~~i~ 122 (508)
T PLN02315 44 NQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGI-GEVQEIID 122 (508)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999985 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|++..++.+.. ...+.. ..+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..
T Consensus 123 ~~~~~~~~~~~l~~-~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~ 199 (508)
T PLN02315 123 MCDFAVGLSRQLNG-SIIPSE--RPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199 (508)
T ss_pred HHHHHHHHHHHhcC-ccccCC--CCCceeEEEEecceEEEEECCCcchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHHH
Confidence 99999876654322 111111 012334678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+.+++.+++.++|+|+|++|+++|+.+.++.|+. .+|.|.||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 200 ~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~aa~~~~~~~lElgGknp~iV~~dA 279 (508)
T PLN02315 200 MTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIVMDDA 279 (508)
T ss_pred HHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEecCCCCeEEECCCC
Confidence 9999999999999999999999996577888886 99999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||++..+++++.+++++++
T Consensus 280 Dl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~ 359 (508)
T PLN02315 280 DIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIK 359 (508)
T ss_pred CHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHH
Q 009919 319 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 398 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 398 (522)
++|+++++||... +..|+|++|||+ +++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 360 ~~Ga~vl~gG~~~----~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~a~Vft~d~~ 434 (508)
T PLN02315 360 SQGGKILTGGSAI----ESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPE 434 (508)
T ss_pred HCCCEEEECCCcC----CCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHH
Confidence 9999999999742 236899999999 69999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH--HhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 399 RAREIAA--QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 399 ~~~~~~~--~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
.++++++ ++++|.|+||+.... ..+.+||||+|.||+|++||.+|+++||+.|+|+..
T Consensus 435 ~a~~~~~~~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 494 (508)
T PLN02315 435 TIFKWIGPLGSDCGIVNVNIPTNG-AEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTIN 494 (508)
T ss_pred HHHHHhhhcccceeEEEEcCCCCC-CCCCCCCCccccccCCccchHHHHHHHhhEEEEEEe
Confidence 9999985 799999999985433 234689999999999999999999999999998764
|
|
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-94 Score=759.52 Aligned_cols=446 Identities=32% Similarity=0.569 Sum_probs=415.7
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.++++++++.|++|++.|+++|.++|.++|++++++|.+++++|++++++|+||+..++. .|+..+++
T Consensus 6 g~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ev~~~~~ 84 (454)
T cd07101 6 GEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAF-EEVLDVAI 84 (454)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-HHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999984 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++++.+++++........ ...+.+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~ 163 (454)
T cd07101 85 VARYYARRAERLLKPRRRRGAIP-VLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALW 163 (454)
T ss_pred HHHHHHHHHHHHhCCccccccCC-CCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 99999999888876654332211 12467899999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhcCccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVD 239 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daD 239 (522)
+.+++. ++|+|+|++++|+|++ +.++.|++.+|.|+||||+.+|+.|++.++++++|+++|||||||+||++|||
T Consensus 164 l~~~~~----~aglP~gv~~~v~g~~~~~~~~l~~~~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dAd 239 (454)
T cd07101 164 AVELLI----EAGLPRDLWQVVTGPGSEVGGAIVDNADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVLEDAD 239 (454)
T ss_pred HHHHHH----HcCcCCCcEEEEeCCcHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEECCCCC
Confidence 887755 7899999999999965 66888888889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHH
Q 009919 240 VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 319 (522)
Q Consensus 240 l~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~ 319 (522)
++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++++++++
T Consensus 240 l~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~~ 319 (454)
T cd07101 240 LDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVA 319 (454)
T ss_pred HHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHH
Q 009919 320 KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 399 (522)
Q Consensus 320 ~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~ 399 (522)
+|+++++||.... +..++|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 320 ~Ga~vl~gg~~~~---~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~ 396 (454)
T cd07101 320 KGATVLAGGRARP---DLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGAR 396 (454)
T ss_pred CCCEEEeCCCCCC---CCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHH
Confidence 9999999986321 2357899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCeeecCCccc-CCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 400 AREIAAQIQCGVAAINDFASN-YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 400 ~~~~~~~l~~G~v~IN~~~~~-~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
++++++++++|+|+||++..+ ...+.+||||+|.||+|++||++|+++||+.|+|+
T Consensus 397 a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 453 (454)
T cd07101 397 GRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVA 453 (454)
T ss_pred HHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEe
Confidence 999999999999999997553 34456899999999999999999999999999985
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-94 Score=762.29 Aligned_cols=445 Identities=29% Similarity=0.441 Sum_probs=409.0
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHH-hhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKV-WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~-w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
|+++++++.++.+++++++++|++|++. |+++|.++|.++|++++++|++++++|++++++|+||+..++...|+..++
T Consensus 25 g~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~ 104 (477)
T cd07113 25 EQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSA 104 (477)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 6899999999999999999999999985 999999999999999999999999999999999999999998656999999
Q ss_pred HHHHHHHHccccccCcccccC--Cc-ccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchH
Q 009919 80 EKITWLLSEGEKWLKPEYRSS--GR-SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASW 156 (522)
Q Consensus 80 ~~l~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~ 156 (522)
+.++++++....+... .... +. ...+.+.+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.
T Consensus 105 ~~l~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp~ 183 (477)
T cd07113 105 NFLRYFAGWATKINGE-TLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPL 183 (477)
T ss_pred HHHHHHHHHHHHhcCc-ccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcH
Confidence 9999988665543221 1110 00 001235678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEE
Q 009919 157 SGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 234 (522)
Q Consensus 157 ~~~~l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV 234 (522)
++..+.+++. ++|+|+|+||+|+|+++.++.|++ .+|.|+||||+.+|+.|++.++++++|+++|||||||+||
T Consensus 184 ~~~~l~~~~~----~aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGkn~~iV 259 (477)
T cd07113 184 TLLRVAELAK----EAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGRQAASDLTRVTLELGGKNAAAF 259 (477)
T ss_pred HHHHHHHHHH----HcCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhhcCceEeecCCCCeeEE
Confidence 9988877654 789999999999997667888887 7999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i 314 (522)
++|||++.|++.|++|+|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|
T Consensus 260 ~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i 339 (477)
T cd07113 260 LKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYL 339 (477)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEec
Q 009919 315 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 394 (522)
Q Consensus 315 ~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s 394 (522)
++++++|+++++||... ...|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 340 ~~a~~~Ga~~l~gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~v~t 415 (477)
T cd07113 340 DDARAEGDEIVRGGEAL----AGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWT 415 (477)
T ss_pred HHHHHCCCEEEeCCCCC----CCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999742 13589999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 395 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 395 ~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
+|.++++++++++++|+|+||++.. ..+.+||||+|+||+|++||.++|++||+.|+|+.
T Consensus 416 ~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 475 (477)
T cd07113 416 NNLSKALRYIPRIEAGTVWVNMHTF--LDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMI 475 (477)
T ss_pred CCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCCccccCCccchHHHHHHhhceEEEEE
Confidence 9999999999999999999997643 23568999999999999999999999999999875
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-93 Score=758.34 Aligned_cols=445 Identities=32% Similarity=0.488 Sum_probs=410.8
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+|+++++++|++|+..|+++|.++|.++|++++++|++++++|+++++.|+||+..+++..|+..+++
T Consensus 26 ~~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~i~ 105 (475)
T cd07117 26 GETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAAD 105 (475)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999997679999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.+.+... +.... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 106 ~l~~~a~~~~~~~~-~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~AL~aGN~VvlKPs~~~p~~~~~ 181 (475)
T cd07117 106 HFRYFAGVIRAEEG-SANMI---DEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLE 181 (475)
T ss_pred HHHHHHHHHHHhcC-ccccc---CCCceeEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHH
Confidence 99998876654322 11111 123356789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+.+++.+ ++|+|++|+|+|++ +.++.|+. .+|.|+||||+.+|+.|++.++++++|+++|||||||+||++|
T Consensus 182 l~~~~~~-----~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~d 256 (475)
T cd07117 182 LAKIIQD-----VLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLIPATLELGGKSANIIFDD 256 (475)
T ss_pred HHHHHHH-----hCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEEeCCCCCeEEECCC
Confidence 9998864 39999999999864 67888887 7999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+++
T Consensus 257 ADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a 336 (475)
T cd07117 257 ANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIA 336 (475)
T ss_pred CChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCcCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||.....+..+.|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.
T Consensus 337 ~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~ 416 (475)
T cd07117 337 KEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDI 416 (475)
T ss_pred HHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHHHHHhCCCcCceEEEECCCH
Confidence 99999999999743221123689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
+++.++++++++|+|+||++.. ..+.+||||+|+||+|++||++||++||+.|+|+.
T Consensus 417 ~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~ 473 (475)
T cd07117 417 NRALRVARAVETGRVWVNTYNQ--IPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYI 473 (475)
T ss_pred HHHHHHHHhCCcceEEECCCCC--CCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEE
Confidence 9999999999999999998544 34568999999999999999999999999999864
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-93 Score=760.52 Aligned_cols=450 Identities=27% Similarity=0.413 Sum_probs=418.4
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.++++.++++|++|++.|+++|.++|.++|++++++|.+++++|++++++|+||+..++. .|+..+++
T Consensus 23 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 101 (478)
T cd07086 23 GEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGRLVSLEMGKILPEGL-GEVQEMID 101 (478)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999986 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.+++++...+++... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 102 ~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~ 178 (478)
T cd07086 102 ICDYAVGLSRMLYGL-TIPSE--RPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIA 178 (478)
T ss_pred HHHHHHHHHHHhcCc-ccccC--CCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCeEEEECCCcchHHHHH
Confidence 999998877664321 11111 113356789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+.+++.++|.++|+|+|++++|+|+++.++.|+. .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 179 l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~p~iV~~dA 258 (478)
T cd07086 179 VTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFGRVLLELGGNNAIIVMDDA 258 (478)
T ss_pred HHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEeecCCCCcEEEcCCC
Confidence 9999999999999999999999997777788887 69999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++
T Consensus 259 dl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~ 338 (478)
T cd07086 259 DLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAK 338 (478)
T ss_pred CHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHH
Q 009919 319 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 398 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 398 (522)
++|+++++||..... ...|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 339 ~~Ga~v~~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~ 416 (478)
T cd07086 339 SQGGTVLTGGKRIDG--GEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLR 416 (478)
T ss_pred HCCCEEEeCCCcCCC--CCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHH
Confidence 999999999974311 125889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH--hccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 399 RAREIAAQ--IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 399 ~~~~~~~~--l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
.+++++++ +++|+|+||+.... ..+.+||||+|.||+|++||++|+++||+.|+|+.+
T Consensus 417 ~a~~~~~~~~~~~G~v~iN~~~~~-~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07086 417 EAFRWLGPKGSDCGIVNVNIPTSG-AEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN 476 (478)
T ss_pred HHHHHHhcCcccceeEEECCCCCC-CCCCCCCCCcccccCCccchHHHHHHhhceEEEEEe
Confidence 99999999 99999999997654 345689999999999999999999999999998753
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-93 Score=762.54 Aligned_cols=447 Identities=29% Similarity=0.488 Sum_probs=413.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+||+..+++..|+..+++
T Consensus 32 g~~i~~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~ 111 (488)
T PRK13252 32 GEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGAD 111 (488)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999987679999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++....... +..+.. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 112 ~l~~~~~~~~~~~g-~~~~~~---~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~ 187 (488)
T PRK13252 112 VLEYYAGLAPALEG-EQIPLR---GGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALK 187 (488)
T ss_pred HHHHHHHHHHHhcC-ceeccC---CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHHH
Confidence 99999887654321 111111 13456789999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+++++. ++|+|+|+||+|+|+++.++.|+. .+|.|+||||+.+|+.|.+.++++++|+++|||||||+||++||
T Consensus 188 l~~~~~----~aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~~l~~~~lElgG~~p~iV~~dA 263 (488)
T PRK13252 188 LAEIYT----EAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASLKEVTMELGGKSPLIVFDDA 263 (488)
T ss_pred HHHHHH----HcCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEEcCCCCeeEECCCC
Confidence 887765 789999999999987778888887 79999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.+++++++
T Consensus 264 dl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 343 (488)
T PRK13252 264 DLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGK 343 (488)
T ss_pred CHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHH
Q 009919 319 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 398 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 398 (522)
++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 344 ~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~I~t~d~~ 423 (488)
T PRK13252 344 AEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLS 423 (488)
T ss_pred HCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCCeEEEEeCCHH
Confidence 99999999996432211246899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 399 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 399 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
.++++++++++|.|+||++.. ..+.+||||+|.||+|++||++|+++||+.|+|+..
T Consensus 424 ~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~ 480 (488)
T PRK13252 424 RAHRVIHQLEAGICWINTWGE--SPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQVE 480 (488)
T ss_pred HHHHHHHhcCccEEEECCCCC--CCCCCCCCCCccCcCCcCChHHHHHHhcceEEEEEe
Confidence 999999999999999998643 334689999999999999999999999999999764
|
|
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-93 Score=761.78 Aligned_cols=444 Identities=30% Similarity=0.514 Sum_probs=411.8
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+++|.++|.++|+++++.|++++++|++++++|+||+..++. .|+..+++
T Consensus 50 g~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~i~ 128 (498)
T PLN02278 50 GEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAI-GEVAYGAS 128 (498)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999986 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.+.++... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 129 ~~~~~~~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~ 205 (498)
T PLN02278 129 FLEYFAEEAKRVYGD-IIPSP--FPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALA 205 (498)
T ss_pred HHHHHHHHHHHhcCc-ccccC--CCCceEEEEeecccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence 999999887765432 11111 123345788999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+.+++ .++|+|+|++++|+|++ +.++.|+. ++|.|+||||+.+|+.|++.++++++|+++|||||||+||++|
T Consensus 206 l~~~l----~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGk~~~iV~~d 281 (498)
T PLN02278 206 AAELA----LQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAATVKRVSLELGGNAPFIVFDD 281 (498)
T ss_pred HHHHH----HHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhhcCCcEEEecCCCCeeEECCC
Confidence 77665 47899999999999976 56788887 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+++
T Consensus 282 Adl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a 361 (498)
T PLN02278 282 ADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDA 361 (498)
T ss_pred CCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||... ..+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 362 ~~~Ga~vl~gG~~~----~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai~~~N~~~~gL~a~vft~d~ 437 (498)
T PLN02278 362 VSKGAKVLLGGKRH----SLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDL 437 (498)
T ss_pred HhCCCEEEeCCccC----CCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 99999999999732 13589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
+.++++++++++|.|+||+.... .+.+||||+|.||+|++||++||++||+.|+|....
T Consensus 438 ~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~~ 496 (498)
T PLN02278 438 QRAWRVSEALEYGIVGVNEGLIS--TEVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCLGN 496 (498)
T ss_pred HHHHHHHHhCCcCeEEECCCCCC--CCCCCcCCcccCcCCccchHHHHHHhheeEEEEEec
Confidence 99999999999999999986543 246899999999999999999999999999997643
|
|
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-93 Score=759.10 Aligned_cols=449 Identities=31% Similarity=0.451 Sum_probs=410.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHH-hhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKV-WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~-w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
||++++++.++.+++++++++|++|+.. |+++|.++|.++|++++++|+++.++|++++++|+||+..++...|+..++
T Consensus 24 g~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~ 103 (481)
T TIGR03216 24 GRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGA 103 (481)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHhHHHHHHHH
Confidence 7899999999999999999999999997 999999999999999999999999999999999999999988656999999
Q ss_pred HHHHHHHHccccccCcccccCCc-ccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 80 EKITWLLSEGEKWLKPEYRSSGR-SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 80 ~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
+.++++++.++.... ....... ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 104 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t~ 182 (481)
T TIGR03216 104 ANFRVFADVVKNAPT-ECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTA 182 (481)
T ss_pred HHHHHHHHHHHHhcC-ccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence 999998887654321 1111000 00123457889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc--hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEE
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA--ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 234 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~--~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV 234 (522)
.++.+++. ++|+|+|++++|+|++ +.++.|+. .+|.|+||||+.+|+.|++.++++++|+++|||||||+||
T Consensus 183 ~~l~~l~~----~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~~aa~~~~~~~lElgG~n~~iV 258 (481)
T TIGR03216 183 TLLGEVMN----AVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADGVKPVSFELGGKNAAIV 258 (481)
T ss_pred HHHHHHHH----HcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhcCCCeEEEECCCCCeEEE
Confidence 88887765 7899999999999854 36777776 8999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i 314 (522)
++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|
T Consensus 259 ~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i 338 (481)
T TIGR03216 259 FADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYY 338 (481)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEeeccCCCCCC-CCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEe
Q 009919 315 NDALDKGAEILARGSFGHLS-EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 393 (522)
Q Consensus 315 ~~a~~~Ga~v~~gG~~~~~~-~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~ 393 (522)
++++++|+++++||.....+ ...+|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++|||
T Consensus 339 ~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gL~~~v~ 418 (481)
T TIGR03216 339 ALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVW 418 (481)
T ss_pred HHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEE
Confidence 99999999999999743211 12468999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 394 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 394 s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
|+|.+.++++++++++|+|+||++..+ .+.+||||+|+||+|++||++|+++||+.|+|+.
T Consensus 419 t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~~ 479 (481)
T TIGR03216 419 TEDLSRAHRVARQMEVGIVWVNSWFLR--DLRTPFGGSKLSGIGREGGVHSLEFYTELTNVCI 479 (481)
T ss_pred CCCHHHHHHHHHhcCccEEEECCCCCC--CCCCCcCCcccCcCCcCchHHHHHHhhceEEEEE
Confidence 999999999999999999999987654 3468999999999999999999999999999865
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-93 Score=756.40 Aligned_cols=457 Identities=54% Similarity=0.898 Sum_probs=426.7
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.++++++++.|++|++.|+++|.++|.++|+++++.|.+++++|+++++.|+||+..++...|+..+++
T Consensus 6 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~~~~~~ 85 (465)
T cd07098 6 GQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEILVTCE 85 (465)
T ss_pred CCeeEEeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999987779999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++...+++.+...+.+....+...+++++|+|||++|+|||||+...+.++++||++||+||+|||+.+|+++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~ 165 (465)
T cd07098 86 KIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGF 165 (465)
T ss_pred HHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHH
Confidence 99999988777655443333221234456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+.+++.++|.++|+|+|++++|+|+.+.++.|+. .+|.|.||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 166 ~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~iV~~da 245 (465)
T cd07098 166 FLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAIVLDDA 245 (465)
T ss_pred HHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECCCC
Confidence 9999999999999999999999997788888887 89999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++.+++|+|.++++++|||+++.+++++.+++++++
T Consensus 246 dl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 325 (465)
T cd07098 246 DLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAV 325 (465)
T ss_pred CHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHH
Q 009919 319 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 398 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 398 (522)
++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 326 ~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~ 405 (465)
T cd07098 326 EKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIK 405 (465)
T ss_pred HCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHH
Confidence 99999999986432211236899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 399 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 399 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
.++++++++++|.|+||++.++...+.+||||+|.||+|+++|++++++||+.|+|..+
T Consensus 406 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 406 RARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred HHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence 99999999999999999987666666799999999999999999999999999999764
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-93 Score=757.68 Aligned_cols=446 Identities=24% Similarity=0.380 Sum_probs=412.8
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.++++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+||+..++. +|+..+++
T Consensus 22 ~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~ 100 (474)
T cd07130 22 GEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKLVSLEMGKILPEGL-GEVQEMID 100 (474)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999985 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++..+.+.. ...+.. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+
T Consensus 101 ~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~ 177 (474)
T cd07130 101 ICDFAVGLSRQLYG-LTIPSE--RPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIA 177 (474)
T ss_pred HHHHHHHhHHHhcC-ccccCC--CCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHcCCeEEeeCCccCHHHHHH
Confidence 99998876543321 111111 123345788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+.+++.++|.++|+|+|++++|+|+.+.++.|++ .+|.|+||||+.+|+.|++.++++++|+++|||||||+||++||
T Consensus 178 l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~p~iV~~da 257 (474)
T cd07130 178 VTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGRSLLELGGNNAIIVMEDA 257 (474)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHhcCCCEEEEcCCCCeEEECCCC
Confidence 9999999999999999999999997778888887 99999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||++..+++++.++|++++
T Consensus 258 dl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 337 (474)
T cd07130 258 DLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAK 337 (474)
T ss_pred CHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHH
Q 009919 319 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 398 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 398 (522)
++|+++++||... +.+|+|++|||+.++++ |.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 338 ~~Ga~v~~gg~~~----~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~ 412 (474)
T cd07130 338 SQGGTVLFGGKVI----DGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLR 412 (474)
T ss_pred HCCCEEEECCCcC----CCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHH
Confidence 9999999999843 23589999999988766 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH--hccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 399 RAREIAAQ--IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 399 ~~~~~~~~--l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
++++++++ +++|+|+||+... ...+.+||||+|+||+|++||++|+++||+.|+|..
T Consensus 413 ~a~~~~~~~~~~~g~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~ 471 (474)
T cd07130 413 NAFRWLGPKGSDCGIVNVNIGTS-GAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTI 471 (474)
T ss_pred HHHHHHhhcCcceEEEEEcCCCC-CCCCCCCcCccccccCCccchHHHHHHHhheEEEEE
Confidence 99999987 8999999998543 334568999999999999999999999999999864
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-93 Score=762.21 Aligned_cols=443 Identities=30% Similarity=0.510 Sum_probs=408.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHH--hhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~--w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
||++++++.++.+|+++++++|++|++. |++++.++|.++|++++++|++++++|++++++|+||+..++...|+..+
T Consensus 83 g~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~~~a~~~Ev~~~ 162 (538)
T PLN02466 83 GEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMF 162 (538)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 6899999999999999999999999974 99999999999999999999999999999999999999999866799999
Q ss_pred HHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++.+++++...++.... ..+.. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 163 ~~~l~~~a~~~~~~~g~-~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~~ 238 (538)
T PLN02466 163 ARLFRYYAGWADKIHGL-TVPAD---GPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 238 (538)
T ss_pred HHHHHHHHHHHHHhcCc-ccccC---CCceEEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHHH
Confidence 99999988765543221 11111 123467899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhc-CCCceeeeCCCcceEEE
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK-TLTPVTLELGGKDAFIV 234 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~-~~~pv~lelgGk~p~iV 234 (522)
.++.+++. ++|+|+|+||+|+|++ +.++.|+. ++|.|+||||+.+|+.|++.+++ +++|+++|||||||+||
T Consensus 239 ~~l~~ll~----eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~~~l~pv~lElGGknp~iV 314 (538)
T PLN02466 239 LYAAKLLH----EAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIV 314 (538)
T ss_pred HHHHHHHH----hcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCCcEEEEcCCCCeEEE
Confidence 88887765 7899999999999965 56788886 89999999999999999999995 89999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i 314 (522)
++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.++++++||+++..+++++.+++
T Consensus 315 ~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~v 394 (538)
T PLN02466 315 CEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYI 394 (538)
T ss_pred cCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCCccCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEec
Q 009919 315 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 394 (522)
Q Consensus 315 ~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s 394 (522)
++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 395 ~~a~~~Ga~v~~gg~~~----~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~~aN~~~~GL~a~VfT 470 (538)
T PLN02466 395 KSGVESGATLECGGDRF----GSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFT 470 (538)
T ss_pred HHHHHCCCEEEecCCcC----CCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEc
Confidence 99999999999999742 23688999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 395 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 395 ~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
+|.+.+.++++++++|+|+||++.. ..+.+||||+|.||+|++||++|+++||+.|+|+..
T Consensus 471 ~d~~~a~~~~~~l~aG~v~IN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~ 531 (538)
T PLN02466 471 QNLDTANTLSRALRVGTVWVNCFDV--FDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTP 531 (538)
T ss_pred CCHHHHHHHHHhCCeeeEEECCCCC--CCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEe
Confidence 9999999999999999999998643 334689999999999999999999999999999763
|
|
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-92 Score=758.73 Aligned_cols=449 Identities=32% Similarity=0.537 Sum_probs=417.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.++++++++.|++|++.|+++|.++|.++|++++++|.++.++|++++++|+||+..++. .|+..+++
T Consensus 42 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 120 (524)
T PRK09407 42 GEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREELLDLVQLETGKARRHAF-EEVLDVAL 120 (524)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999885 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++++++++.++...... ......++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 121 ~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ALaaGN~VIlKPs~~tp~~~~~ 199 (524)
T PRK09407 121 TARYYARRAPKLLAPRRRAGAL-PVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALA 199 (524)
T ss_pred HHHHHHHHHHHhhCCccccccC-CCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHH
Confidence 9999999888877655432211 112467889999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhcCccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVD 239 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daD 239 (522)
+.+++. ++|+|+|++++|+|++ +.++.|++++|.|+||||+++|+.|++.++++++|+++|||||||+||++|||
T Consensus 200 l~~ll~----eaGlP~gvv~~v~g~~~~~~~~L~~~~d~V~fTGs~~~g~~v~~~aa~~~~~v~lElGGknp~iV~~dAD 275 (524)
T PRK09407 200 AVELLY----EAGLPRDLWQVVTGPGPVVGTALVDNADYLMFTGSTATGRVLAEQAGRRLIGFSLELGGKNPMIVLDDAD 275 (524)
T ss_pred HHHHHH----HcCCCcccEEEEecCCchHHHHHHhcCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceeEECCCCC
Confidence 888765 7899999999999965 67888888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHH
Q 009919 240 VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 319 (522)
Q Consensus 240 l~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~ 319 (522)
++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++++++++
T Consensus 276 l~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 355 (524)
T PRK09407 276 LDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVA 355 (524)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCCccCCCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHH
Q 009919 320 KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 399 (522)
Q Consensus 320 ~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~ 399 (522)
+|+++++||.... ...|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.
T Consensus 356 ~Ga~vl~gG~~~~---~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~~N~~~~gLsa~V~t~d~~~ 432 (524)
T PRK09407 356 KGATVLAGGKARP---DLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTAR 432 (524)
T ss_pred CCCEEEeCCccCC---CCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence 9999999987321 1257899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCeeecCCccc-CCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 400 AREIAAQIQCGVAAINDFASN-YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 400 ~~~~~~~l~~G~v~IN~~~~~-~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
+.++++++++|.|+||+...+ ...+.+||||+|.||+|++||.+|+++||+.|+|+...
T Consensus 433 a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~ 492 (524)
T PRK09407 433 GRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQR 492 (524)
T ss_pred HHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEEEcc
Confidence 999999999999999996543 23456899999999999999999999999999998765
|
|
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-93 Score=753.72 Aligned_cols=446 Identities=38% Similarity=0.635 Sum_probs=419.0
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|++++.++|.++|+++++.|++++++|++++++|+||+..++. .|+..+++
T Consensus 6 ~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~ev~~~~~ 84 (453)
T cd07099 6 GEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAG-LEVLLALE 84 (453)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999998774 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.+.+++..+..+......+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~~~~~ 164 (453)
T cd07099 85 AIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGEL 164 (453)
T ss_pred HHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 99999998888776544332221235567899999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc-CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVD 239 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~-~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daD 239 (522)
+.+++. ++|+|+|++++|+|+.+.+..|++ .+|.|+||||+++|+.|++.++++++|+++|+|||||+||++|||
T Consensus 165 l~~~l~----~ag~P~g~~~vv~g~~~~~~~l~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dad 240 (453)
T cd07099 165 LAEAWA----AAGPPQGVLQVVTGDGATGAALIDAGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLADAD 240 (453)
T ss_pred HHHHHH----HcCCCCCeEEEEeCCchHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECCCCC
Confidence 887765 789999999999997778888888 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHH
Q 009919 240 VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 319 (522)
Q Consensus 240 l~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~ 319 (522)
++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++++++
T Consensus 241 l~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~ 320 (453)
T cd07099 241 LERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVA 320 (453)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHH
Q 009919 320 KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 399 (522)
Q Consensus 320 ~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~ 399 (522)
+|+++++||... ...|.|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.
T Consensus 321 ~ga~~~~gg~~~----~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~ 396 (453)
T cd07099 321 KGAKALTGGARS----NGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLAR 396 (453)
T ss_pred CCCEEEeCCCcC----CCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHH
Confidence 999999999742 1468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 400 AREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 400 ~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
++++++++++|.|+||+...+...+.+||||+|.||+|++||++||++||+.|+|+
T Consensus 397 ~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 397 AEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 99999999999999999877666678999999999999999999999999999986
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-93 Score=753.61 Aligned_cols=445 Identities=31% Similarity=0.469 Sum_probs=411.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+||+..++...|+..+++
T Consensus 26 ~~~~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~ 105 (480)
T cd07559 26 GKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAID 105 (480)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999987679999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++......... ... ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 106 ~~~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~ 181 (480)
T cd07559 106 HFRYFAGVIRAQEGSL-SEI---DEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILV 181 (480)
T ss_pred HHHHHHHHHHHhcCcc-ccC---CCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECchhhhHHHHH
Confidence 9999988765432211 111 123456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++.+. +|+|++|+|+|++ +.++.|++ .+|.|+||||+.+|+.|++.++++++|+++|||||||+||++|
T Consensus 182 l~~l~~~~-----lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~p~~lElGGk~p~iV~~d 256 (480)
T cd07559 182 LMELIGDL-----LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLIPVTLELGGKSPNIFFDD 256 (480)
T ss_pred HHHHHHHh-----CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEeccCCCCeEEEcCC
Confidence 99887642 9999999999965 67888887 8999999999999999999999999999999999999999999
Q ss_pred C-----CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHH
Q 009919 238 V-----DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN 312 (522)
Q Consensus 238 a-----Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~ 312 (522)
| |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.+
T Consensus 257 A~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~ 336 (480)
T cd07559 257 AMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILS 336 (480)
T ss_pred ccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCcCHHHHHHHHH
Confidence 9 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEE
Q 009919 313 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 392 (522)
Q Consensus 313 ~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v 392 (522)
+|++++++|+++++||.....+....|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||
T Consensus 337 ~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v 416 (480)
T cd07559 337 YVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGV 416 (480)
T ss_pred HHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEE
Confidence 99999999999999997542222246899999999999999999999999999999999999999999999999999999
Q ss_pred ecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 393 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 393 ~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
||+|.+++.++++++++|+|+||++.. ..+.+||||+|+||+|++||++|+++||+.|+|+.
T Consensus 417 ~t~d~~~a~~~a~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v~~ 478 (480)
T cd07559 417 WTRDINRALRVARGIQTGRVWVNCYHQ--YPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNILV 478 (480)
T ss_pred ECCCHHHHHHHHHhcCcceEEECCCCC--CCCCCCcCCCccCcCCccChHHHHHHhhceEEEEE
Confidence 999999999999999999999997543 23469999999999999999999999999999865
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-92 Score=753.86 Aligned_cols=448 Identities=26% Similarity=0.394 Sum_probs=411.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.++++.++++|++|++.|+++|.++|.++|++++++|++++++|+++++.|+||+..+++ .|+..+++
T Consensus 26 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ev~~~~~ 104 (478)
T cd07085 26 GEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELARLITLEHGKTLADAR-GDVLRGLE 104 (478)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999985 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.+++++...+.. ..+..... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 105 ~~~~~~~~~~~~-~g~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~~ 181 (478)
T cd07085 105 VVEFACSIPHLL-KGEYLENV--ARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMR 181 (478)
T ss_pred HHHHHHHHHHHh-CCeecccC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHH
Confidence 999987654432 22221110 123456899999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+.+++. ++|+|+|++++|+|+.+.++.|++ .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 182 l~~~l~----~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dA 257 (478)
T cd07085 182 LAELLQ----EAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKRVQALGGAKNHAVVMPDA 257 (478)
T ss_pred HHHHHH----HhCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCcEEecCCCCCceEECCCC
Confidence 887765 789999999999997778888887 79999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++
T Consensus 258 Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~ 337 (478)
T cd07085 258 DLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGV 337 (478)
T ss_pred CHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHH
Q 009919 319 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 398 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 398 (522)
++|+++++||.....+...+|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 338 ~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~ 417 (478)
T cd07085 338 EEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGA 417 (478)
T ss_pred HCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 99999999997432222246899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCC--cchHHHHHhchhceEEEEc
Q 009919 399 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR--FAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 399 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~--~~g~~~l~~ft~~k~v~~~ 457 (522)
.++++++++++|+|+||++.. ...+.+||||+|+||+|+ +||++|+++||+.|+|+..
T Consensus 418 ~~~~~~~~l~~G~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~~ 477 (478)
T cd07085 418 AARKFQREVDAGMVGINVPIP-VPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSR 477 (478)
T ss_pred HHHHHHHhCCcceEEEcCCCC-CCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEEe
Confidence 999999999999999998743 334568999999999994 6899999999999998753
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-92 Score=750.56 Aligned_cols=446 Identities=30% Similarity=0.494 Sum_probs=412.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.++++++++.|++|++.|+++|.++|.++|+++++.|.+++++|++++++|+||+..++. .|+..+++
T Consensus 7 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~ 85 (456)
T cd07110 7 EATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAA-WDVDDVAG 85 (456)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999986 59999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.++++........+....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~ 165 (456)
T cd07110 86 CFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELE 165 (456)
T ss_pred HHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccchHHHHH
Confidence 99999988877632111111111124567899999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+.+++. ++|+|+|+|++|+|++ +.++.|++ .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|
T Consensus 166 l~~~~~----~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~iV~~d 241 (456)
T cd07110 166 LAEIAA----EAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFDD 241 (456)
T ss_pred HHHHHH----HcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCeeEECCC
Confidence 888765 7899999999999965 57888887 7999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++++++
T Consensus 242 adl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~a 321 (456)
T cd07110 242 ADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARG 321 (456)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+.+|+++++||..... ...++|++|||+.+++++|.++++|+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 322 ~~~Ga~~~~gg~~~~~--~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~ 399 (456)
T cd07110 322 KEEGARLLCGGRRPAH--LEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDA 399 (456)
T ss_pred HhCCCEEEeCCCcccc--cCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCH
Confidence 9999999999974321 14688999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
+.++++++++++|+|+||++.. ..+.+||||+|+||+|+++|++|+++||+.|+|+
T Consensus 400 ~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 400 ERCDRVAEALEAGIVWINCSQP--CFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred HHHHHHHHhCCcceEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence 9999999999999999998643 3456999999999999999999999999999985
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-92 Score=756.19 Aligned_cols=446 Identities=29% Similarity=0.481 Sum_probs=412.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+++++++++|++|++.|++++.++|.++|++++++|++++++|++++++|+||+..+++ .|+..+++
T Consensus 26 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~ 104 (488)
T TIGR02299 26 NEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTR-QQVIRAAE 104 (488)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999987 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.+++++.....+.+ ....+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~ 180 (488)
T TIGR02299 105 NFRFFADKCEEAMDGRTYPVD----THLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAAR 180 (488)
T ss_pred HHHHHHHhHHHhcCCccccCC----CceEEEEEEecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECchhchHHHHH
Confidence 999999888755443333222 2346788999999999999999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+.+++. ++|+|+|+|++|+|++ +.++.|+. .+|.|+||||+.+|+.|++.++++++|+++|||||||+||++|
T Consensus 181 l~~~~~----~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~~l~~~~lElGGknp~iV~~d 256 (488)
T TIGR02299 181 LAEIAK----EAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLKRFSMELGGKSPVIVFDD 256 (488)
T ss_pred HHHHHH----HcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCeEEEEcCCCCeEEECCC
Confidence 777654 7899999999999855 66788886 7999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|+++
T Consensus 257 Adl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a 336 (488)
T TIGR02299 257 ADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAA 336 (488)
T ss_pred CCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCC---CCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEec
Q 009919 318 LDKGAEILARGSFGHL---SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 394 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~---~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s 394 (522)
+++|+++++||..... .....|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 337 ~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t 416 (488)
T TIGR02299 337 EKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWT 416 (488)
T ss_pred HhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEc
Confidence 9999999999974211 0013588999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 395 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 395 ~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
+|.+.++++++++++|+|+||+.... .+.+||||+|+||+|+++|++|+++||+.|+|+.+
T Consensus 417 ~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~ 477 (488)
T TIGR02299 417 NDVGRAHRVALALEAGMIWVNSQNVR--HLPTPFGGVKASGIGREGGTYSFDFYTETKNVALA 477 (488)
T ss_pred CCHHHHHHHHHhCCcCeEEECCCCCC--CCCCCCCCCccCcCCccchHHHHHHHhceEEEEEe
Confidence 99999999999999999999986553 34689999999999999999999999999999764
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-93 Score=754.75 Aligned_cols=441 Identities=31% Similarity=0.521 Sum_probs=407.8
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHH--hhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~--w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
||++++++.++.+|+++++++|++|++. |+.+|.++|.++|++++++|++++++|++++++|+||+..++...|+..+
T Consensus 29 ~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 108 (476)
T cd07142 29 GEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLA 108 (476)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 6899999999999999999999999975 99999999999999999999999999999999999999999876799999
Q ss_pred HHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++.+++++...++.... ..+.. .....++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 109 ~~~l~~~a~~~~~~~g~-~~~~~---~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~ 184 (476)
T cd07142 109 ARLFRYYAGWADKIHGM-TLPAD---GPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSA 184 (476)
T ss_pred HHHHHHHHHHHHHhcCc-ccccC---CCceEEEEEeceeeEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcccHHH
Confidence 99999998765543221 11111 123457899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhc-CCCceeeeCCCcceEEE
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK-TLTPVTLELGGKDAFIV 234 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~-~~~pv~lelgGk~p~iV 234 (522)
..+++++. ++|+|+|++++|+|++ +.++.|+. ++|.|+||||+.+|+.|++.+++ +++|+++|||||||+||
T Consensus 185 ~~l~~~~~----~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa~~~~~~v~lElgGk~p~iV 260 (476)
T cd07142 185 LLAAKLAA----EAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIV 260 (476)
T ss_pred HHHHHHHH----HcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHHcCCCeEEEECCCCCeeEE
Confidence 88887654 7899999999999965 56888886 89999999999999999999997 99999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i 314 (522)
++|||++.|++.+++|+|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++
T Consensus 261 ~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~v 340 (476)
T cd07142 261 CEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYI 340 (476)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEec
Q 009919 315 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 394 (522)
Q Consensus 315 ~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s 394 (522)
++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 341 ~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~vft 416 (476)
T cd07142 341 EHGKEEGATLITGGDRI----GSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFS 416 (476)
T ss_pred HHHHhCCCEEEecCCcC----CCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999742 23688999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 395 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 395 ~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
+|.+.++++++++++|+|+||++.. ..+.+||||+|+||+|++||++|+++||+.|+|+
T Consensus 417 ~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 475 (476)
T cd07142 417 KNIDTANTLSRALKAGTVWVNCYDV--FDASIPFGGYKMSGIGREKGIYALNNYLQVKAVV 475 (476)
T ss_pred CCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHhhheeEEe
Confidence 9999999999999999999998643 3456999999999999999999999999999985
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-92 Score=749.75 Aligned_cols=444 Identities=30% Similarity=0.466 Sum_probs=410.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.++++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+||+..++. +|+..+++
T Consensus 7 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 85 (456)
T cd07107 7 GQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAML-GDVMVAAA 85 (456)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999984 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++..+. +..+..+.+ .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 86 ~l~~~a~~~~~-~~~~~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~ 161 (456)
T cd07107 86 LLDYFAGLVTE-LKGETIPVG---GRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALR 161 (456)
T ss_pred HHHHHHHHHHH-hCCccccCC---CCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHHHH
Confidence 99999876543 333322222 13456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+.+++.+ ++|+|+||+|+|+. +.++.|++ .+|.|+||||+++|+.|++.++++++|+++|||||||+||++|
T Consensus 162 l~~~~~~-----~lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~d 236 (456)
T cd07107 162 LAELARE-----VLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFPD 236 (456)
T ss_pred HHHHHHH-----hCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeEEECCC
Confidence 9988774 38999999999876 46888887 7999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHH-HHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAA-LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 238 aDl~~aa~~i~~~~-~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
||++.|++.|++++ |.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++
T Consensus 237 adl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~ 316 (456)
T cd07107 237 ADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDS 316 (456)
T ss_pred CCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHH
Confidence 99999999999995 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
++++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d 396 (456)
T cd07107 317 AKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTND 396 (456)
T ss_pred HHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCC
Confidence 99999999999974322223468999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
.++++++++++++|.|+||++..+. +.+||||+|+||+|++||++|+++||+.|+|+.
T Consensus 397 ~~~~~~~~~~l~~G~v~iN~~~~~~--~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~ 454 (456)
T cd07107 397 ISQAHRTARRVEAGYVWINGSSRHF--LGAPFGGVKNSGIGREECLEELLSYTQEKNVNV 454 (456)
T ss_pred HHHHHHHHHhcCcCEEEECCCCCCC--CCCCcCCcccccCCcCchHHHHHHhhceEEEEE
Confidence 9999999999999999999876543 468999999999999999999999999999864
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-92 Score=748.94 Aligned_cols=438 Identities=32% Similarity=0.542 Sum_probs=406.6
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.++++.++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+||+..++. .|+..+++
T Consensus 7 g~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~ 85 (448)
T TIGR01780 7 GEIIGTVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAK-GEILYAAS 85 (448)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999985 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.+++++...+++.... .+.. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 86 ~l~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~ 162 (448)
T TIGR01780 86 FLEWFAEEAKRVYGDT-IPSP--QSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALA 162 (448)
T ss_pred HHHHHHHHHHHhcCcc-ccCC--CCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHHHH
Confidence 9999887665543221 1111 123455678899999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCc-c-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGF-A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~-~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
+.+++. ++|+|+|++|+|+|+ + +.++.|++ ++|.|+||||+.+|+.|++.++++++|+++|||||||+||++
T Consensus 163 l~~~~~----~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~~iV~~ 238 (448)
T TIGR01780 163 LARLAE----QAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFD 238 (448)
T ss_pred HHHHHH----HcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECC
Confidence 888765 789999999999996 4 66888886 899999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++
T Consensus 239 dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~ 318 (448)
T TIGR01780 239 DADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIAD 318 (448)
T ss_pred CCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 319 a~~~Ga~il~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d 394 (448)
T TIGR01780 319 AVEKGAKVVTGGKRH----ELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRD 394 (448)
T ss_pred HHHCCCEEEeCCCcC----CCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCC
Confidence 999999999999732 2358899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhce
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 452 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k 452 (522)
.+.++++++++++|.|+||+.... .+.+||||+|+||+|+++|++|+++||+.|
T Consensus 395 ~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 395 LATIWRVAEALEYGMVGINTGLIS--NVVAPFGGVKQSGLGREGSKYGIEEYLETK 448 (448)
T ss_pred HHHHHHHHHhCCccEEEECCCCCC--CCCCCCCCcccccCCccchHHHHHHHhccC
Confidence 999999999999999999997543 346899999999999999999999999875
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-92 Score=751.65 Aligned_cols=448 Identities=33% Similarity=0.501 Sum_probs=412.7
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHH-----HHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQ-----KVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 75 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~-----~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei 75 (522)
|+++++++.++.+|+++++++|++|| ..|+.+|.++|.++|++++++|++++++|++++++|+||+..++. .|+
T Consensus 33 ~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev 111 (503)
T PLN02467 33 EETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAA-WDM 111 (503)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHH
Confidence 68999999999999999999999999 899999999999999999999999999999999999999999996 699
Q ss_pred HHHHHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCch
Q 009919 76 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 155 (522)
Q Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~ 155 (522)
..+++.+++++..++++......+......+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|
T Consensus 112 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp 191 (503)
T PLN02467 112 DDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELAS 191 (503)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCcCc
Confidence 99999999999877765332211111111123568899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceE
Q 009919 156 WSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 232 (522)
Q Consensus 156 ~~~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~ 232 (522)
.++..+++++. ++|+|+|++|+|+|++ +.++.|+. .+|.|+||||+.+|+.|++.+++++||+++|+|||||+
T Consensus 192 ~~~~~l~~~~~----eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~~~ 267 (503)
T PLN02467 192 VTCLELADICR----EVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQMVKPVSLELGGKSPI 267 (503)
T ss_pred HHHHHHHHHHH----HcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhccCCcEEEECCCCCce
Confidence 99998887765 7899999999999965 67888886 89999999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHH
Q 009919 233 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN 312 (522)
Q Consensus 233 iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~ 312 (522)
||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.+
T Consensus 268 iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~ 347 (503)
T PLN02467 268 IVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLK 347 (503)
T ss_pred EECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEE
Q 009919 313 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 392 (522)
Q Consensus 313 ~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v 392 (522)
+|++++++|+++++||...+ ....|+|++|||+.+++++|.+++||+||||++|++|+|.||||+++|+++|||++||
T Consensus 348 ~v~~a~~~Ga~vl~gG~~~~--~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~gL~a~v 425 (503)
T PLN02467 348 FISTAKSEGATILCGGKRPE--HLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAV 425 (503)
T ss_pred HHHHHHHCCCEEEeCCCCCC--CCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEE
Confidence 99999999999999997421 1135889999999999999999999999999999999999999999999999999999
Q ss_pred ecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 393 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 393 ~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
||+|.+.+.++++++++|.|+||++... ...+||||+|.||+|+++|++|+++||+.|++...
T Consensus 426 ~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~ 488 (503)
T PLN02467 426 ISNDLERCERVSEAFQAGIVWINCSQPC--FCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTKY 488 (503)
T ss_pred ECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCcccCcCCCcchHHHHHHhhCeEEEEEe
Confidence 9999999999999999999999986442 34689999999999999999999999999999874
|
|
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-92 Score=751.96 Aligned_cols=444 Identities=27% Similarity=0.443 Sum_probs=411.8
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.++++++++.|++|++.|++++.++|.++|+++++.|.+++++|++++++|+||+..++. .|+..+++
T Consensus 25 ~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 103 (473)
T cd07097 25 SDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELARLLTREEGKTLPEAR-GEVTRAGQ 103 (473)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999996 59999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++..+++..+.. .. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 104 ~l~~~a~~~~~~~g~~~-~~--~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~ 180 (473)
T cd07097 104 IFRYYAGEALRLSGETL-PS--TRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWA 180 (473)
T ss_pred HHHHHHHHHHHhcCccc-cc--CCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHH
Confidence 99999987766543221 11 1123456899999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+.+++. ++|+|+|++|+|+|++ +.++.|+. .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|
T Consensus 181 l~~~~~----~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~d 256 (473)
T cd07097 181 LVEILE----EAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGARVQLEMGGKNPLVVLDD 256 (473)
T ss_pred HHHHHH----HcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEEECCCCCeeEECCC
Confidence 887765 7899999999999975 57888886 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|+++
T Consensus 257 adl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a 336 (473)
T cd07097 257 ADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIA 336 (473)
T ss_pred CCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||..... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 337 ~~~Ga~v~~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~ 414 (473)
T cd07097 337 RSEGAKLVYGGERLKR--PDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSL 414 (473)
T ss_pred HHCCCEEEeCCccCCC--CCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCH
Confidence 9999999999974321 13578999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC-CcchHHHHHhchhceEEE
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~~l~~ft~~k~v~ 455 (522)
+.++++++++++|+|+||+...+. .+.+||||+|.||+| ++||++|+++||+.|+|.
T Consensus 415 ~~a~~~~~~l~~g~v~iN~~~~~~-~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~ 472 (473)
T cd07097 415 KHATHFKRRVEAGVVMVNLPTAGV-DYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVY 472 (473)
T ss_pred HHHHHHHHhCCcCeEEECCCCCCC-CCCCCCCCcccccCcccCCcHHHHHHhhceeEEe
Confidence 999999999999999999865443 346999999999999 899999999999999985
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-92 Score=747.07 Aligned_cols=447 Identities=31% Similarity=0.472 Sum_probs=414.4
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhh-cCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWA-KSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~-~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
||++++++.++.++++++++.|++|++.|+ ++|..+|.++|++++++|++++++|++++++|+||+..++...|+..++
T Consensus 7 g~~i~~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~i 86 (459)
T cd07089 7 EEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAMQVDGPI 86 (459)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 789999999999999999999999999999 9999999999999999999999999999999999999877667999999
Q ss_pred HHHHHHHHccccccCcccccCCc-ccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 80 EKITWLLSEGEKWLKPEYRSSGR-SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 80 ~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
+.++++++++.++......+... ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~ 166 (459)
T cd07089 87 GHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSA 166 (459)
T ss_pred HHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHH
Confidence 99999999888765443322211 11245678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEc
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~ 235 (522)
..+.+++. ++|+|+|++++|+|++ +.+..|+. .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||+
T Consensus 167 ~~l~~~~~----~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~n~~iV~ 242 (459)
T cd07089 167 LLLGEIIA----ETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANIVL 242 (459)
T ss_pred HHHHHHHH----HcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeeEEC
Confidence 88887765 6899999999999976 46888886 89999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 236 ~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
+|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++
T Consensus 243 ~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~i~ 322 (459)
T cd07089 243 DDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIA 322 (459)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
+++++|+++++||..... ...|+|++|||+++++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 323 ~a~~~Ga~~l~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~ 400 (459)
T cd07089 323 RGRDEGARLVTGGGRPAG--LDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSA 400 (459)
T ss_pred HHHHCCCEEEeCCCcCCC--CCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEEcC
Confidence 999999999999974211 136899999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
|.+.++++++++++|.|+||+... ..+.+||||+|+||+|++||++|+++||+.|+|.
T Consensus 401 d~~~~~~~~~~~~~G~v~iN~~~~--~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~ 458 (459)
T cd07089 401 DVDRAYRVARRIRTGSVGINGGGG--YGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458 (459)
T ss_pred CHHHHHHHHHhcCcCeEEECCCCC--CCCCCCcCCcccccCCCCchHHHHHHhhceeEEe
Confidence 999999999999999999998753 3456899999999999999999999999999985
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-92 Score=747.01 Aligned_cols=442 Identities=33% Similarity=0.529 Sum_probs=409.0
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.++++++++.|++|++.|+++|.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 9 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 87 (456)
T cd07145 9 GEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSR-VEVERTIR 87 (456)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 59999999
Q ss_pred HHHHHHHccccccCcccccCCc--ccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGR--SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
.++++++..+. +..+..+... ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 88 ~l~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~ 166 (456)
T cd07145 88 LFKLAAEEAKV-LRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTA 166 (456)
T ss_pred HHHHHHHHHHH-hcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence 99999887653 3322221110 01123467889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEc
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~ 235 (522)
..+.+++. ++|+|+|++++|+|++ +.++.|+. .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||+
T Consensus 167 ~~l~~~~~----~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~n~~iV~ 242 (456)
T cd07145 167 IELAKILE----EAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPMIVL 242 (456)
T ss_pred HHHHHHHH----HcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeeEEC
Confidence 88887765 6799999999999964 66888887 89999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 236 ~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
+|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++
T Consensus 243 ~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~ 322 (456)
T cd07145 243 KDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVN 322 (456)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
+++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 323 ~a~~~ga~vl~gg~~------~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~ 396 (456)
T cd07145 323 DAVEKGGKILYGGKR------DEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTN 396 (456)
T ss_pred HHHHCCCEEEeCCCC------CCCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECC
Confidence 999999999999972 23899999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
|.+.+.++++++++|+|+||+.... ..+.+||||+|+||+|++||++||++||+.|+|.
T Consensus 397 d~~~~~~~~~~~~~g~v~vN~~~~~-~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~ 455 (456)
T cd07145 397 DINRALKVARELEAGGVVINDSTRF-RWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIV 455 (456)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCCcccccCCcCchHHHHHHhhceeEEe
Confidence 9999999999999999999987643 2346999999999999999999999999999985
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-92 Score=744.95 Aligned_cols=441 Identities=23% Similarity=0.343 Sum_probs=408.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHH-hhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKV-WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~-w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
||++++++.++.+++++++++|++||+. |+.+|.++|.++|++++++|+++.++|++++++|+||+..++. .|+...+
T Consensus 9 ~~~i~~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~i 87 (455)
T cd07148 9 LKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAK-VEVTRAI 87 (455)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 6899999999999999999999999998 5679999999999999999999999999999999999999986 6999999
Q ss_pred HHHHHHHHccccccCcccccCCc--ccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHH
Q 009919 80 EKITWLLSEGEKWLKPEYRSSGR--SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 157 (522)
Q Consensus 80 ~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~ 157 (522)
+.+++++++++++..... +... ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~ 166 (455)
T cd07148 88 DGVELAADELGQLGGREI-PMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLS 166 (455)
T ss_pred HHHHHHHHHHHHhcCccc-ccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCCcccHH
Confidence 999999998877654321 1111 0123456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEc
Q 009919 158 GCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235 (522)
Q Consensus 158 ~~~l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~ 235 (522)
+..+.+++. ++|+|+|++++|+|+.+.++.|+. .+|.|.||||+++|+.|+++++. .+|+++|+|||||+||+
T Consensus 167 ~~~l~~~~~----~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lElGG~~p~iV~ 241 (455)
T cd07148 167 CLAFVDLLH----EAGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEHGGAAPVIVD 241 (455)
T ss_pred HHHHHHHHH----HcCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEecCCCCceEEC
Confidence 998888766 689999999999997778888886 89999999999999999999886 49999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 236 ~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
+|||++.|++.|++|+|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++++
T Consensus 242 ~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~ 321 (455)
T cd07148 242 RSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVN 321 (455)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
+++++|+++++||.. ..+.|++|||+++++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 322 ~a~~~Ga~vl~gg~~------~~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~ 395 (455)
T cd07148 322 EAVAAGARLLCGGKR------LSDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTK 395 (455)
T ss_pred HHHhCCCEEEeCCcc------CCCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcC
Confidence 999999999999973 24789999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
|.+.+.++++++++|.|+||++.... .+.+||||+|.||+|+++|.+|+++||+.|++.
T Consensus 396 d~~~~~~~~~~~~~g~v~iN~~~~~~-~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07148 396 DLDVALKAVRRLDATAVMVNDHTAFR-VDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAV 454 (455)
T ss_pred CHHHHHHHHHHcCcCeEEECCCCCCC-CCCCCCCcchhcccCCCchHHHHHHhhceeEEe
Confidence 99999999999999999999875333 346899999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-92 Score=748.78 Aligned_cols=442 Identities=27% Similarity=0.450 Sum_probs=409.6
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|++++.++|.++|+++++.|.+++++|++++++|+||+..++...|+..+++
T Consensus 27 ~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~ 106 (475)
T PRK13473 27 GEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVD 106 (475)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999998886569999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.+++++...+.+..... +. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 107 ~~~~~a~~~~~~~g~~~-~~--~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~ 183 (475)
T PRK13473 107 VFRFFAGAARCLEGKAA-GE--YLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALK 183 (475)
T ss_pred HHHHHHHHHHHhcCccc-cc--CCCCceeEEEEecceeEEEEccCChHHHHHHHHHHHHHhcCCEEEEECCCCChHHHHH
Confidence 99999876554432211 10 0123356789999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCc-chhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~-~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+.+++. ++ +|+|++|+|+|+ .+.+..|+. .+|.|+||||+.+|+.|++.++++++|+++|||||||+||++|
T Consensus 184 l~~~~~----~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~d 258 (475)
T PRK13473 184 LAELAA----DI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADSVKRTHLELGGKAPVIVFDD 258 (475)
T ss_pred HHHHHH----Hh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECCC
Confidence 888876 45 999999999995 477888887 7999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|+++
T Consensus 259 ADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a 338 (475)
T PRK13473 259 ADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERA 338 (475)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcC-CcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 318 LDKG-AEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 318 ~~~G-a~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
.++| +++++||... ...|+|++|||+.++++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 339 ~~~G~a~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d 414 (475)
T PRK13473 339 KALGHIRVVTGGEAP----DGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRD 414 (475)
T ss_pred HHcCCeEEEECCCcC----CCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHHHHhCCCCCceEEEECCC
Confidence 9999 9999999742 2358899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
.++++++++++++|+|+||++... .+.+||||+|.||+|++||++|+++||+.|+++.
T Consensus 415 ~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~ 472 (475)
T PRK13473 415 VGRAHRVSARLQYGCTWVNTHFML--VSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMV 472 (475)
T ss_pred HHHHHHHHHhCCcceEEECCCCCC--CCCCCCCCccccccCccchHHHHHHHhceEEEEE
Confidence 999999999999999999997654 3468999999999999999999999999999864
|
|
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-92 Score=745.92 Aligned_cols=440 Identities=32% Similarity=0.502 Sum_probs=407.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.++++++++.|++|++.|++++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 20 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~~~ 98 (465)
T cd07151 20 GETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIRESGSTRIKAN-IEWGAAMA 98 (465)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999986 59999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH-H
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG-C 159 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~-~ 159 (522)
.++++++...++.. ...+. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++ .
T Consensus 99 ~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~ 175 (465)
T cd07151 99 ITREAATFPLRMEG-RILPS--DVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGL 175 (465)
T ss_pred HHHHHHHhHHHhcC-ccccC--CCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHhHHH
Confidence 99998876554321 11111 11244568899999999999999999999999999999999999999999999986 4
Q ss_pred HHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 160 FYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 160 ~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
++.+ +|.++|+|+|++++|+|++ +.++.|+. .+|.|.||||+.+|+.|++.++++++|+++|||||||+||++
T Consensus 176 ~l~~----~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~p~iV~~ 251 (465)
T cd07151 176 LLAK----IFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALELGGNNPFVVLE 251 (465)
T ss_pred HHHH----HHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECC
Confidence 4554 4558999999999999864 67888887 799999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++
T Consensus 252 daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~ 331 (465)
T cd07151 252 DADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQ 331 (465)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
++++|+++++||. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 332 a~~~ga~vl~gg~-------~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d 404 (465)
T cd07151 332 AVEEGATLLVGGE-------AEGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSD 404 (465)
T ss_pred HHhCCCEEEecCC-------cCCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCC
Confidence 9999999999986 258899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
.++++++++++++|+|+||+++.+. .+.+||||+|+||+|++||++||++||+.|+++.
T Consensus 405 ~~~a~~~~~~l~~G~v~iN~~~~~~-~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~ 463 (465)
T cd07151 405 LERGVQFARRIDAGMTHINDQPVND-EPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISV 463 (465)
T ss_pred HHHHHHHHHhCCcCeEEECCCCCCC-CCCCCCCCcccccCCcCChHHHHHHhhceEEEEe
Confidence 9999999999999999999986553 3568999999999999999999999999999865
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-92 Score=745.21 Aligned_cols=445 Identities=32% Similarity=0.486 Sum_probs=412.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.++++++++.|++|++.|++++.++|.++|+++++.|.++.++|++++++|+||+..++. .|+..+++
T Consensus 7 ~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~ 85 (457)
T cd07090 7 GEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEAR-VDIDSSAD 85 (457)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999998885 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++..+.. ..+..+.+ .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 86 ~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~~~ 161 (457)
T cd07090 86 CLEYYAGLAPTL-SGEHVPLP---GGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALL 161 (457)
T ss_pred HHHHHHHHHHHh-CCeeeccC---CCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHHHH
Confidence 999998876553 22222211 24566889999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+.+++. ++|+|+|++++|+|+.+.++.|+. .+|.|+||||+.+|+.|++.++++++|+++|||||||+||++||
T Consensus 162 l~~~~~----~aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dA 237 (457)
T cd07090 162 LAEILT----EAGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDA 237 (457)
T ss_pred HHHHHH----HcCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCceEECCCC
Confidence 888765 689999999999987778888887 79999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++
T Consensus 238 dl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 317 (457)
T cd07090 238 DLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAK 317 (457)
T ss_pred CHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCCC-CCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 319 DKGAEILARGSFGHLS-EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~-~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
++|+++++||.....+ ...+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 318 ~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~ 397 (457)
T cd07090 318 QEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDL 397 (457)
T ss_pred HCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCH
Confidence 9999999999743211 113588999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
+.++++++++++|.|+||++... .+.+||||+|.||+|++||++|+++||+.|+|+.
T Consensus 398 ~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~ 454 (457)
T cd07090 398 QRAHRVIAQLQAGTCWINTYNIS--PVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYV 454 (457)
T ss_pred HHHHHHHHhCCcCeEEECCCCCC--CCCCCcCCCccCcCCccchHHHHHHHhCeEEEEE
Confidence 99999999999999999986443 3568999999999999999999999999999865
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-92 Score=751.23 Aligned_cols=445 Identities=23% Similarity=0.360 Sum_probs=409.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH-hHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIE-HQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~-~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
|+++++++.++.+++++++++|++|+..|+++|..+|.++|++++++|++ ++++|++++++|+||+..++...|+...+
T Consensus 57 g~~l~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ela~~~~~e~Gk~~~~a~~~~v~~~~ 136 (522)
T cd07123 57 AHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKYRYELNAATMLGQGKNVWQAEIDAACELI 136 (522)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhCHHHHHHHHHHhcCCCHHHHhHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999996 89999999999999999988666888899
Q ss_pred HHHHHHHHccccccCcccccCCcccccccceEEEeec-eEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 80 EKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 80 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
+.++|++..+.++........ ..+...+++++|+ |||++|+|||||+.+..+++++|| +||+||+|||+.+|.++
T Consensus 137 ~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~~~~pal-aGN~VVlKPs~~tp~~~ 212 (522)
T cd07123 137 DFLRFNVKYAEELYAQQPLSS---PAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAVLSN 212 (522)
T ss_pred HHHHHHHHHHHHhcCccccCC---CCCceeEEEEecCCceEEEECCcccHHHHHHHHHHHHH-hCCEEEEECCCCCCHHH
Confidence 999999887776644322111 1134568999998 999999999999999999999999 59999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCC------ceeeeCCCc
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLT------PVTLELGGK 229 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~------pv~lelgGk 229 (522)
..+.+++. ++|+|+|+||+|+|++ +.++.|+. ++|.|+||||+.+|+.|++.++++++ |+++|||||
T Consensus 213 ~~l~~~l~----~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGk 288 (522)
T cd07123 213 YLVYKILE----EAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGK 288 (522)
T ss_pred HHHHHHHH----HcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhhcccccccCCEEEECCCC
Confidence 88887655 7899999999999976 57888886 99999999999999999999999987 899999999
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHH
Q 009919 230 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 309 (522)
Q Consensus 230 ~p~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~ 309 (522)
||+||++|||++.|++.|++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||++.+++++
T Consensus 289 n~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~ 368 (522)
T cd07123 289 NFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDR 368 (522)
T ss_pred CeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCccCCCCCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHc-CCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCC--HHHHHHHHhcCC-
Q 009919 310 LQNLVNDALDK-GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVKLANDSR- 385 (522)
Q Consensus 310 ~~~~i~~a~~~-Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~n~~~- 385 (522)
+.++|++++++ |+++++||... ...|+|++|||+++++++|++++||+||||++|++|++ +||||+++|++.
T Consensus 369 v~~~v~~a~~~~Ga~vl~gg~~~----~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~~~~eai~~aN~~~~ 444 (522)
T cd07123 369 IKGYIDHAKSDPEAEIIAGGKCD----DSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSP 444 (522)
T ss_pred HHHHHHHHHHCCCCEEEeCCCcC----CCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEEEeCCCCHHHHHHHHhCCCC
Confidence 99999999999 99999998631 23589999999999999999999999999999999984 799999999985
Q ss_pred CCceeEEecCcHHHHHHHHHHh--ccCCeeecCCcccCCCCCCCccCCCCCCCC-CcchHHHHHhchhceEEEEc
Q 009919 386 YGLGCAVFSGSQHRAREIAAQI--QCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 386 ~gL~a~v~s~d~~~~~~~~~~l--~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~~l~~ft~~k~v~~~ 457 (522)
|||++||||+|.+.+.++++++ ++|.|+||+...+...+.+||||+|.||+| +.+|.+++++||+.|++...
T Consensus 445 ~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~~~l~~~~~~k~~~~~ 519 (522)
T cd07123 445 YALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGSPLNLLRWVSPRTIKET 519 (522)
T ss_pred cCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCCHHHHHHhcceEEEEEe
Confidence 9999999999999999999996 599999999876655567899999999996 99999999999999998764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-92 Score=741.25 Aligned_cols=442 Identities=29% Similarity=0.415 Sum_probs=409.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHH--hhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~--w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
|+++++++.++.+|++++++.|++||.. |+. +..+|.++|++++++|++++++|++++++|+||+..++. .|+..+
T Consensus 7 ~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~Ev~~~ 84 (455)
T cd07120 7 GEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEAR-FEISGA 84 (455)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHH
Confidence 6899999999999999999999999985 998 899999999999999999999999999999999999996 699999
Q ss_pred HHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++.++++++.+++..... ... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 85 i~~l~~~~~~~~~~~g~~-~~~---~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~~~ 160 (455)
T cd07120 85 ISELRYYAGLARTEAGRM-IEP---EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQIN 160 (455)
T ss_pred HHHHHHHHHHHHHhcCcc-ccc---CCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChHHH
Confidence 999999998776643211 111 1234568999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh-cCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEE
Q 009919 159 CFYFRIIQAALAA-VGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 234 (522)
Q Consensus 159 ~~l~~~~~~~l~~-ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV 234 (522)
..+.+++. + +|+|+|++++|+|++ +.++.|++ .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||
T Consensus 161 ~~l~~~~~----~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~~~IV 236 (455)
T cd07120 161 AAIIRILA----EIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIV 236 (455)
T ss_pred HHHHHHHH----HhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeeEE
Confidence 98888766 5 699999999999865 67888887 8999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i 314 (522)
++|+|++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++++++
T Consensus 237 ~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i 316 (455)
T cd07120 237 FDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMV 316 (455)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEec
Q 009919 315 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 394 (522)
Q Consensus 315 ~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s 394 (522)
++++++|+++++||...+.. ...|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 317 ~~a~~~ga~~~~~g~~~~~~-~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift 395 (455)
T cd07120 317 ERAIAAGAEVVLRGGPVTEG-LAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWT 395 (455)
T ss_pred HHHHHCCCEEEeCCccCccc-CCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEc
Confidence 99999999999988643211 23688999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 395 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 395 ~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
+|.+.+++++.++++|.|+||++... .+.+||||+|+||+|++||++|+++||+.|+|+
T Consensus 396 ~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~ 454 (455)
T cd07120 396 RDLARAMRVARAIRAGTVWINDWNKL--FAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY 454 (455)
T ss_pred CCHHHHHHHHHhcCcceEEECCCCCC--CCCCCcCCccccccCccchHHHHHHHhceeEEe
Confidence 99999999999999999999997553 346899999999999999999999999999985
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-91 Score=750.69 Aligned_cols=444 Identities=26% Similarity=0.414 Sum_probs=412.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.++++++++.|++|+..|++++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 57 ~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~-~ev~~~i~ 135 (512)
T cd07124 57 SEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRRFELAAWMVLEVGKNWAEAD-ADVAEAID 135 (512)
T ss_pred CceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCcCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 59999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.+.++ ..+..+.. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 136 ~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~ 211 (512)
T cd07124 136 FLEYYAREMLRL-RGFPVEMV---PGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAK 211 (512)
T ss_pred HHHHHHHHHHHh-cCccccCC---CCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHH
Confidence 999999988776 22222211 23467899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhc------CCCceeeeCCCcce
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK------TLTPVTLELGGKDA 231 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~------~~~pv~lelgGk~p 231 (522)
+.+++. ++|+|+|++++|+|++ +.++.|+. ++|.|+||||+.+|+.|++.+++ +++|+++|||||||
T Consensus 212 l~~~~~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p 287 (512)
T cd07124 212 LVEILE----EAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNA 287 (512)
T ss_pred HHHHHH----HhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCe
Confidence 887765 7899999999999965 66888887 79999999999999999999987 69999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHH
Q 009919 232 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 311 (522)
Q Consensus 232 ~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~ 311 (522)
+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.
T Consensus 288 ~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~ 367 (512)
T cd07124 288 IIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIR 367 (512)
T ss_pred EEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeE
Q 009919 312 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 391 (522)
Q Consensus 312 ~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~ 391 (522)
++|+++.+ |+++++||..... .+.|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 368 ~~i~~a~~-g~~vl~gG~~~~~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ 444 (512)
T cd07124 368 RYIEIGKS-EGRLLLGGEVLEL--AAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGG 444 (512)
T ss_pred HHHHHHHh-CCEEEecCccCCC--CCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEE
Confidence 99999988 8999999974211 13689999999999999999999999999999999999999999999999999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC-CcchHHHHHhchhceEEEE
Q 009919 392 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 392 v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~~l~~ft~~k~v~~ 456 (522)
|||+|.+.++++++++++|+|+||+...+...+.+||||+|+||+| +.+|++|+++||+.|+|+.
T Consensus 445 v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~k~v~~ 510 (512)
T cd07124 445 VFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTVTE 510 (512)
T ss_pred EEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHhccEEEEEE
Confidence 9999999999999999999999999876665567999999999999 6778999999999999865
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-91 Score=746.61 Aligned_cols=442 Identities=29% Similarity=0.468 Sum_probs=410.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH---HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMT 77 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~---~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~ 77 (522)
|+++++++.++.++++++++.|++|++ .|+++|.++|.++|+++++.|.++.++|++++++|+||+..++...|+..
T Consensus 32 g~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~ 111 (481)
T cd07141 32 GEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPG 111 (481)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCchHHHHHHHHHH
Confidence 689999999999999999999999998 69999999999999999999999999999999999999998776679999
Q ss_pred HHHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHH
Q 009919 78 TCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 157 (522)
Q Consensus 78 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~ 157 (522)
+++.++++++..+++.... .+.. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|++
T Consensus 112 ~~~~l~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~ 187 (481)
T cd07141 112 AIKVLRYYAGWADKIHGKT-IPMD---GDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLT 187 (481)
T ss_pred HHHHHHHHHHHHHHhcCce-ecCC---CCceEEEEEeceeEEEEEccChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcHH
Confidence 9999999988776654321 1111 12346789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhc-CCCceeeeCCCcceEE
Q 009919 158 GCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK-TLTPVTLELGGKDAFI 233 (522)
Q Consensus 158 ~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~-~~~pv~lelgGk~p~i 233 (522)
+..+.+++. ++|+|+|++++|+|++ +.++.|+. .+|.|+||||+.+|+.|++.+++ +++|+++|+|||||+|
T Consensus 188 ~~~l~~~l~----~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~lElGG~~~~i 263 (481)
T cd07141 188 ALYLASLIK----EAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNI 263 (481)
T ss_pred HHHHHHHHH----HcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhhhcCceEEEEcCCCCeEE
Confidence 988877754 7899999999999965 66788887 89999999999999999999987 8999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHH
Q 009919 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 313 (522)
Q Consensus 234 V~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~ 313 (522)
|++|||++.|++.|++|+|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++
T Consensus 264 V~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~ 343 (481)
T cd07141 264 VFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILEL 343 (481)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCcCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEe
Q 009919 314 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 393 (522)
Q Consensus 314 i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~ 393 (522)
|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 344 i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vf 419 (481)
T cd07141 344 IESGKKEGAKLECGGKRH----GDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVF 419 (481)
T ss_pred HHHHHHCCCEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEE
Confidence 999999999999999742 2368899999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 394 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 394 s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
|+|.+++.++++++++|+|+||++.. ..+.+||||+|.||+|++||.+|+++||+.|+|+.
T Consensus 420 t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~ 480 (481)
T cd07141 420 TKDIDKAITFSNALRAGTVWVNCYNV--VSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTI 480 (481)
T ss_pred CCCHHHHHHHHHhcCcCeEEECCCCC--CCCCCCCCCcccCcCCccchHHHHHHHhheEEEEE
Confidence 99999999999999999999998643 34568999999999999999999999999999864
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-91 Score=747.51 Aligned_cols=446 Identities=30% Similarity=0.487 Sum_probs=412.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH--HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~--~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
|+++++++.++.++++++++.|++|++ .|+++|..+|.++|+++++.|++++++|++++++|+||+..++. .|+..+
T Consensus 23 g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~ 101 (482)
T cd07119 23 GEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELARLETLNTGKTLRESE-IDIDDV 101 (482)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHH
Confidence 688999999999999999999999997 59999999999999999999999999999999999999999986 599999
Q ss_pred HHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++.++++++..++... +..+.. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 102 ~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~ 177 (482)
T cd07119 102 ANCFRYYAGLATKETG-EVYDVP---PHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTT 177 (482)
T ss_pred HHHHHHHHHHHHHhcC-ccccCC---CCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCccccHHH
Confidence 9999999888765322 211111 234568999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEc
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~ 235 (522)
.++.+++. ++|+|+|++++|+|++ +.++.|++ .+|.|+||||+.+|+.|++.++++++|+++|||||||+||+
T Consensus 178 ~~l~~~~~----~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGkn~~iV~ 253 (482)
T cd07119 178 IALFELIE----EAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKKVALELGGKNPNIVF 253 (482)
T ss_pred HHHHHHHH----HcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEC
Confidence 88888765 7899999999999876 47888887 89999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 236 ~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
+|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++
T Consensus 254 ~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gpli~~~~~~~~~~~i~ 333 (482)
T cd07119 254 ADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQ 333 (482)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
+++++|+++++||..........|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 334 ~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~ 413 (482)
T cd07119 334 LGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTK 413 (482)
T ss_pred HHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECC
Confidence 99999999999997432211236899999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
|.+.++++++++++|.|+||++.. ..+.+||||+|+||+|++||++|+++||+.|+|+..
T Consensus 414 d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~ 473 (482)
T cd07119 414 DIARANRVARRLRAGTVWINDYHP--YFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININ 473 (482)
T ss_pred CHHHHHHHHHhcCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEe
Confidence 999999999999999999998644 345689999999999999999999999999999764
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-91 Score=739.77 Aligned_cols=437 Identities=32% Similarity=0.508 Sum_probs=407.7
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.++++++++.|++|++.|+++|.++|.++|++++++|.+++++|++++++|+||+..++. .|+..+++
T Consensus 7 g~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 85 (446)
T cd07106 7 GEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQ-FEVGGAVA 85 (446)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999886 59999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.... ...... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 86 ~l~~~~~~~~~---~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~ 159 (446)
T cd07106 86 WLRYTASLDLP---DEVIED---DDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLK 159 (446)
T ss_pred HHHHHHhhhhc---CccccC---CCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 99998876421 111111 123467899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+.+++.++ +|+|++++++|+.+.+..|++ .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 160 l~~~~~~~-----lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~dA 234 (446)
T cd07106 160 LGELAQEV-----LPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPDV 234 (446)
T ss_pred HHHHHHHh-----CCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCeeEECCCC
Confidence 99988753 899999999997778888887 79999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.+++|+|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++++.
T Consensus 235 Dl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~ 314 (446)
T cd07106 235 DIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAK 314 (446)
T ss_pred CHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHH
Q 009919 319 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 398 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 398 (522)
.+|+++++||... ...|+|++|||+++++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 315 ~~ga~~~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~ 390 (446)
T cd07106 315 AKGAKVLAGGEPL----DGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLE 390 (446)
T ss_pred HCCCEEEeCCCcC----CCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 9999999999732 135889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 399 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 399 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
.++++++++++|.|+||++.. ..+.+||||+|+||+|++||++|+++||+.|+|.
T Consensus 391 ~~~~~~~~~~~G~v~iN~~~~--~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 391 RAEAVARRLEAGTVWINTHGA--LDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred HHHHHHHhCCccEEEECCCCC--CCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence 999999999999999999763 3456899999999999999999999999999985
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-91 Score=740.47 Aligned_cols=442 Identities=33% Similarity=0.515 Sum_probs=409.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.++++++++.|++|+..|+.+|.++|.++|++++++|++++++|++++++|+||+..++...|+..+++
T Consensus 7 ~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~i~ 86 (453)
T cd07115 7 GELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDVPRAAD 86 (453)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999987669999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++..++... ...+. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 87 ~l~~~~~~~~~~~g-~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~ 162 (453)
T cd07115 87 TFRYYAGWADKIEG-EVIPV---RGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALR 162 (453)
T ss_pred HHHHHHHHHHHhcC-ceecC---CCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHH
Confidence 99998876544322 11111 123456899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+.+++. ++|+|++++++|+|+. +.++.|+. .+|.|+||||+.+|+.|++.++++++|+++|||||||+||++|
T Consensus 163 l~~~~~----~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~iV~~d 238 (453)
T cd07115 163 IAELMA----EAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFAD 238 (453)
T ss_pred HHHHHH----hcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCceEECCC
Confidence 887765 6899999999999965 56788886 7999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.|++++|.|+||.|+++++||||++++|+|++.|+++++++++|+|.++++++||++++.+++++.++|+++
T Consensus 239 Adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 318 (453)
T cd07115 239 ADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVG 318 (453)
T ss_pred CCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
.++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 319 ~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~ 394 (453)
T cd07115 319 REEGARLLTGGKRP----GARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDL 394 (453)
T ss_pred HHCCCEEEeCCCCC----CCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCH
Confidence 99999999998731 13588999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
+.+++++.++++|+|+||++.. ..+.+||||+|.||+|++||++|+++||+.|+++.
T Consensus 395 ~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~ 451 (453)
T cd07115 395 GRAHRVAAALKAGTVWINTYNR--FDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWV 451 (453)
T ss_pred HHHHHHHHhcCccEEEECCCCC--CCCCCCCCCcccccCCcCchHHHHHHhhceEEEEE
Confidence 9999999999999999998543 34569999999999999999999999999999864
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-91 Score=740.43 Aligned_cols=443 Identities=31% Similarity=0.500 Sum_probs=409.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhh-cCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWA-KSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~-~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
|+++++++.++.++++++++.|++|++.|. ++|.++|.++|++++++|.+++++|++++++|+||+..+++ .|+..++
T Consensus 7 g~~i~~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 85 (454)
T cd07109 7 GEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQAR-ADVEAAA 85 (454)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 789999999999999999999999999877 99999999999999999999999999999999999999986 6999999
Q ss_pred HHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHH
Q 009919 80 EKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGC 159 (522)
Q Consensus 80 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~ 159 (522)
+.++++++..+++... ..+. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 86 ~~l~~~~~~~~~~~g~-~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~ 161 (454)
T cd07109 86 RYFEYYGGAADKLHGE-TIPL---GPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTAL 161 (454)
T ss_pred HHHHHHHHHHHHhcCc-cccc---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 9999998877665332 1111 12346789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcEeeecCc-chhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 160 FYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 160 ~l~~~~~~~l~~ag~p~g~v~vv~g~-~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
.+.+++. ++|+|+|++++|+|. .+.++.|++ .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++
T Consensus 162 ~l~~~~~----~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~~iV~~ 237 (454)
T cd07109 162 RLAELAE----EAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFA 237 (454)
T ss_pred HHHHHHH----HcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCceEECC
Confidence 8887654 789999999999985 477888987 799999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++++++++.++|++
T Consensus 238 daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~~ 316 (454)
T cd07109 238 DADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVAR 316 (454)
T ss_pred CCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999875 6899999999999999999999
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
+.++|+++++||.....+ ...|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 317 a~~~ga~~l~gg~~~~~~-~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d 395 (454)
T cd07109 317 ARARGARIVAGGRIAEGA-PAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRD 395 (454)
T ss_pred HHhCCCEEEeCCCcCccc-CCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCC
Confidence 999999999998743211 2468899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
.+.++++++++++|.|+||++..+. .+.+||||+|.||+|++||++|+++||+.|+|.
T Consensus 396 ~~~~~~~~~~l~~g~v~iN~~~~~~-~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 453 (454)
T cd07109 396 GDRALRVARRLRAGQVFVNNYGAGG-GIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453 (454)
T ss_pred HHHHHHHHHhcCcCeEEECCCCCCC-CCCCCcCCcccCcCCccchHHHHHHHhceeEEe
Confidence 9999999999999999999976444 346899999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-91 Score=737.87 Aligned_cols=438 Identities=32% Similarity=0.480 Sum_probs=406.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.++++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+||+..++. .|+..+++
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~i~ 79 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAG-FEVGAAIG 79 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999998885 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH-H
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG-C 159 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~-~ 159 (522)
.++++++...+... ...+. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++ .
T Consensus 80 ~l~~~~~~~~~~~~-~~~~~---~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~ 155 (443)
T cd07152 80 ELHEAAGLPTQPQG-EILPS---APGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGV 155 (443)
T ss_pred HHHHHHHhHHHhCC-ccccc---cCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHH
Confidence 99998876543221 11111 1244568899999999999999999999999999999999999999999999996 4
Q ss_pred HHHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 160 FYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 160 ~l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
.+.++ |.++|+|+|++++|+|+.+.+..|+. ++|.|+||||+.+|+.|++.++++++|+++|||||||+||++|
T Consensus 156 ~l~~~----~~~ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~d 231 (443)
T cd07152 156 VIARL----FEEAGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDD 231 (443)
T ss_pred HHHHH----HHHhCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCC
Confidence 55555 45789999999999997678888887 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+++
T Consensus 232 Adl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a 311 (443)
T cd07152 232 ADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDS 311 (443)
T ss_pred CCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
.++|+++++||. .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 312 ~~~Ga~vl~gg~-------~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~ 384 (443)
T cd07152 312 VAAGARLEAGGT-------YDGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDV 384 (443)
T ss_pred HhCCCEEEeccC-------cCCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCH
Confidence 999999999987 2478999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC-CcchHHHHHhchhceEEE
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~~l~~ft~~k~v~ 455 (522)
++++++++++++|.|+||++..+. .+.+||||+|.||+| +.+|++|+++||+.|+++
T Consensus 385 ~~a~~~~~~l~~G~v~iN~~~~~~-~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~ 442 (443)
T cd07152 385 GRAMALADRLRTGMLHINDQTVND-EPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVT 442 (443)
T ss_pred HHHHHHHHhCCcCeEEECCCCCCC-CCCCCCCCcccccCCCccCcHHHHHHhhceeEEe
Confidence 999999999999999999976653 456999999999999 777999999999999875
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-91 Score=741.92 Aligned_cols=442 Identities=31% Similarity=0.499 Sum_probs=407.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH-Hhh-cCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK-VWA-KSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~-~w~-~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
|+++++++.++.+++++++++|++||. .|+ ++|.++|.++|+++++.|++++++|++++++|+||+..++...|+..+
T Consensus 32 ~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~ 111 (481)
T cd07143 32 GKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQAS 111 (481)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 689999999999999999999999998 599 999999999999999999999999999999999999977655699999
Q ss_pred HHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++.++++++..++.... ..... .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 112 ~~~~~~~a~~a~~~~g~-~~~~~---~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~ 187 (481)
T cd07143 112 ADTFRYYGGWADKIHGQ-VIETD---IKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSA 187 (481)
T ss_pred HHHHHHHHHHHHHhcCc-cccCC---CCceEEEEEecceeEEEECCCcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHHH
Confidence 99999988766543221 11111 234567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhc-CCCceeeeCCCcceEEE
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK-TLTPVTLELGGKDAFIV 234 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~-~~~pv~lelgGk~p~iV 234 (522)
..+.+++. ++|+|+|++++|+|++ +.++.|+. .+|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||
T Consensus 188 ~~l~~~l~----~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~~~~~~~~lElGG~~p~iV 263 (481)
T cd07143 188 LYMTKLIP----EAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTLELGGKSPNIV 263 (481)
T ss_pred HHHHHHHH----hcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHHhcCCEEEeecCCCCeeEE
Confidence 88777654 7899999999999965 66888887 89999999999999999999985 89999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i 314 (522)
++|||++.|++.+++|+|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|
T Consensus 264 ~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i 343 (481)
T cd07143 264 FDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYI 343 (481)
T ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEec
Q 009919 315 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 394 (522)
Q Consensus 315 ~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s 394 (522)
++++.+|+++++||... ...|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 344 ~~a~~~ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t 419 (481)
T cd07143 344 ESGKAEGATVETGGKRH----GNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFT 419 (481)
T ss_pred HHHHhCCCEEEeCCCCC----CCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999742 23688999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 395 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 395 ~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
+|.+.+.++++++++|+|+||++.. ..+.+||||+|.||+|++||++|+++||+.|+|+.
T Consensus 420 ~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~ 479 (481)
T cd07143 420 NNINNAIRVANALKAGTVWVNCYNL--LHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHI 479 (481)
T ss_pred CCHHHHHHHHHhcCcCeEEECCCCC--CCCCCCCCCccccccCcccHHHHHHHHhCeEEEEE
Confidence 9999999999999999999998644 34568999999999999999999999999999864
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-91 Score=742.10 Aligned_cols=443 Identities=28% Similarity=0.437 Sum_probs=405.6
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|+++++.|+||+..++...|+..+++
T Consensus 26 g~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~ 105 (479)
T cd07116 26 GKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAID 105 (479)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999886579999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++......... ... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 106 ~~~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~ 181 (479)
T cd07116 106 HFRYFAGCIRAQEGSI-SEI---DENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILV 181 (479)
T ss_pred HHHHHHHhHHHcCCee-ecC---CCCceEEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence 9999988765532211 111 122346789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+.+++.+ + +|+|++|+|+|.+ +.+..|+. .+|.|+||||+.+|+.|++.++++++|+++|||||||+||++|
T Consensus 182 l~~l~~~----a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~p~~lElGGk~p~iV~~d 256 (479)
T cd07116 182 LMELIGD----L-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENIIPVTLELGGKSPNIFFAD 256 (479)
T ss_pred HHHHHHH----H-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHcCCCeEEEECCCCCeEEEecC
Confidence 9988875 3 9999999999854 67888886 9999999999999999999999999999999999999999988
Q ss_pred ------CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHH
Q 009919 238 ------VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 311 (522)
Q Consensus 238 ------aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~ 311 (522)
||++.|++.++++. +|+||.|++++|||||++++|+|+++|+++++++++|+|.++++.+||++++++++++.
T Consensus 257 a~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~ 335 (479)
T cd07116 257 VMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKIL 335 (479)
T ss_pred cccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHH
Confidence 79999999999965 59999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeE
Q 009919 312 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 391 (522)
Q Consensus 312 ~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~ 391 (522)
++|++++++|+++++||.....+....|+|++|||+.+++ +|.+++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 336 ~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gLsa~ 414 (479)
T cd07116 336 SYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAG 414 (479)
T ss_pred HHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeCCHHHHHHHHhCCcccceEE
Confidence 9999999999999999974322212368899999999874 999999999999999999999999999999999999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 392 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 392 v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
|||+|.++++++++++++|.|+||++... .+.+||||+|+||+|++||++||++||+.|+|+.
T Consensus 415 v~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 477 (479)
T cd07116 415 VWTRDGNTAYRMGRGIQAGRVWTNCYHLY--PAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLLV 477 (479)
T ss_pred EEcCCHHHHHHHHHhcCcCeEEECCCCCC--CCCCCcCCCccCcCCccChHHHHHHhhceEEEEE
Confidence 99999999999999999999999976443 3468999999999999999999999999999865
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-91 Score=739.04 Aligned_cols=444 Identities=31% Similarity=0.485 Sum_probs=414.0
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.++++++++.|++|++.|++++..+|.++|++++++|+++.++|++++++|+||+..++. .|+..+++
T Consensus 6 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev~~~~~ 84 (452)
T cd07102 6 GSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAG-GEIRGMLE 84 (452)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999985 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.+++++.....+.. .+...+++++|+|||++|+|||||+.+.+.++++||++||+||+|||+.+|.++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~ 161 (452)
T cd07102 85 RARYMISIAEEALADIRVPEK---DGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGER 161 (452)
T ss_pred HHHHHHHHHHHhcCCcccCCC---CCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHH
Confidence 999999988877654433221 24456789999999999999999999999999999999999999999999999987
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+.+++. ++|+|+|++|+|+|+.+.+..|+. .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 162 l~~~l~----~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~dA 237 (452)
T cd07102 162 FAAAFA----EAGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDA 237 (452)
T ss_pred HHHHHH----hcCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEcCCC
Confidence 777654 789999999999997788888987 89999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.+++|+|.|+||.|+++++||||++++|+|++.|+++++++++|+|.++++++||+++..+++++.+++++++
T Consensus 238 Dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~ 317 (452)
T cd07102 238 DLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAI 317 (452)
T ss_pred CHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHH
Q 009919 319 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 398 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 398 (522)
++|+++++||.....+ +..|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 318 ~~ga~vl~gg~~~~~~-~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~ 396 (452)
T cd07102 318 AKGARALIDGALFPED-KAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIA 396 (452)
T ss_pred hCCCEEEeCCCCCCCC-CCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHH
Confidence 9999999999743211 246899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 399 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 399 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
.+.++++++++|+|+||++.. ..+.+||||+|+||+|++||++|+++||+.|+++
T Consensus 397 ~~~~~~~~l~~G~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 397 RAEALGEQLETGTVFMNRCDY--LDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred HHHHHHHHcCcceEEECCCCC--CCCCCCCCCccccccCccchHHHHHHHhceeEEe
Confidence 999999999999999998753 3456899999999999999999999999999984
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-91 Score=746.86 Aligned_cols=443 Identities=25% Similarity=0.406 Sum_probs=411.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.++++++++.|++|++.|+++|.++|.++|++++++|.+++++|++++++|+||+..++. .|+..+++
T Consensus 57 ~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~ 135 (511)
T TIGR01237 57 SEVVGKVGKASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRHELNALICLEVGKIIPEAD-AEVAEAID 135 (511)
T ss_pred CcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999986 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.+++++++++++.+... +. ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..
T Consensus 136 ~~~~~a~~~~~~~~~~~-~~--~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~ 212 (511)
T TIGR01237 136 FCEYYAREMERLAGQGV-NL--DIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAAK 212 (511)
T ss_pred HHHHHHHHHHHhcCccc-cC--CCCCceeEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHH
Confidence 99999998887754221 11 1134567889999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHh------cCCCceeeeCCCcce
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS------KTLTPVTLELGGKDA 231 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa------~~~~pv~lelgGk~p 231 (522)
+.+++. ++|+|+|+||+|+|++ +.++.|+. .+|.|.||||+.+|+.|++.++ ++++|+++|||||||
T Consensus 213 l~~~~~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~~~~~~lElgG~~p 288 (511)
T TIGR01237 213 IVEILI----EAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDAAKVQPGQKHLKRVIAEMGGKDA 288 (511)
T ss_pred HHHHHH----HhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHHhcccccccccceeEeccCCCCe
Confidence 887755 7899999999999964 67888986 8999999999999999999988 589999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHH
Q 009919 232 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 311 (522)
Q Consensus 232 ~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~ 311 (522)
+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.
T Consensus 289 ~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~~~~~~~~~gpli~~~~~~~v~ 368 (511)
T TIGR01237 289 IIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNVGPTDDPSTQVGPVIDQKSQAKIQ 368 (511)
T ss_pred EEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeE
Q 009919 312 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 391 (522)
Q Consensus 312 ~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~ 391 (522)
+++++++++| ++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 369 ~~i~~a~~~g-~~l~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~ 443 (511)
T TIGR01237 369 EYIEQGKAEG-ELAIGGCDA----PSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAADFDEALEIANGTEYGLTGG 443 (511)
T ss_pred HHHHHHHHCC-cEEECCccC----CCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEE
Confidence 9999999888 899988631 23689999999999999999999999999999999999999999999999999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCC-cchHHHHHhchhceEEEE
Q 009919 392 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 392 v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~-~~g~~~l~~ft~~k~v~~ 456 (522)
|||+|.+.++++++++++|+|+||++..+...+.+||||+|.||+|+ .+|++++++||+.|+|+.
T Consensus 444 i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~v~~ 509 (511)
T TIGR01237 444 VYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPKTVTE 509 (511)
T ss_pred EEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcceEEEEE
Confidence 99999999999999999999999998766555568999999999995 689999999999999864
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-91 Score=743.85 Aligned_cols=445 Identities=31% Similarity=0.523 Sum_probs=409.4
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHH-hhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKV-WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~-w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
|+++++++.++.++++.++++|++|++. |+++|.++|.++|+++++.|.+++++|++++++|+||+..++...|+..++
T Consensus 33 g~~i~~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~ 112 (484)
T cd07144 33 GEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEII 112 (484)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 6899999999999999999999999996 889999999999999999999999999999999999998776557999999
Q ss_pred HHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHH
Q 009919 80 EKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGC 159 (522)
Q Consensus 80 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~ 159 (522)
+.+++++++.+++.. ...+.. .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 113 ~~l~~~~~~~~~~~g-~~~~~~---~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~ 188 (484)
T cd07144 113 AVIRYYAGWADKIQG-KTIPTS---PNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLL 188 (484)
T ss_pred HHHHHHHHHHHHhcC-ceecCC---CCceEEEEEecceEEEEECcCCCHHHHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 999999988776522 111111 2334678999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 160 FYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 160 ~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
.+.+++. ++|+|+|++|+|+|++ +.++.|+. .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++
T Consensus 189 ~l~~~~~----~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~~~~~~~lElGGk~p~iV~~ 264 (484)
T cd07144 189 YFANLVK----EAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQNLKAVTLECGGKSPALVFE 264 (484)
T ss_pred HHHHHHH----HhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCeEEEEcCCCCeEEECC
Confidence 8877754 7899999999999964 67888887 899999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHh-ccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~-~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
|||++.|++.+++|+|.|+||.|+++++||||++++|+|++.|++++++ +++|+|.++++++||++++.+++++.++++
T Consensus 265 dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~ 344 (484)
T cd07144 265 DADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIE 344 (484)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCCCcCCCCcCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999985 899999999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
+++++|+++++||..... ....|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 345 ~a~~~ga~v~~gg~~~~~-~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~ 423 (484)
T cd07144 345 KGKKEGAKLVYGGEKAPE-GLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTK 423 (484)
T ss_pred HHHHCCCEEEeCCCcCcc-cCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECC
Confidence 999999999999974221 1236889999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
|.+.+.++++++++|+|+||+... ..+.+||||+|+||+|++||++|+++||+.|+|..
T Consensus 424 d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 482 (484)
T cd07144 424 DIRRAHRVARELEAGMVWINSSND--SDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHI 482 (484)
T ss_pred CHHHHHHHHHhcCcCEEEECCCCC--CCCCCCcCCcccCcCCCCchHHHHHHhhceEEEEE
Confidence 999999999999999999998643 34568999999999999999999999999999864
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-91 Score=741.17 Aligned_cols=442 Identities=31% Similarity=0.500 Sum_probs=407.8
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+++|.++|.++|++++++|.+++++|++++++|+||+..++...|+..+++
T Consensus 23 ~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~ 102 (467)
T TIGR01804 23 QEVIATVAEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKLETLDTGKTLEETSVADMDDIAD 102 (467)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999985579999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.+++... ...+.. .....++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 103 ~l~~~a~~~~~~~~-~~~~~~---~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~ 178 (467)
T TIGR01804 103 VFEFFAGLADKDGG-EIIPLP---IPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSEITPLTALK 178 (467)
T ss_pred HHHHHHHHHHHhCC-ccccCC---CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCccCcHHHHH
Confidence 99999887665322 111111 11345789999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCc-chhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~-~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++. ++|+|+|++++|+|+ .+.++.|+. .+|.|+||||+.+|+.|++.+++++||+++|+|||||+||++|
T Consensus 179 l~~~~~----~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~l~~~~lElGG~~~~iV~~d 254 (467)
T TIGR01804 179 VAELME----EAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAADHLKHVTMELGGKSPLIVFDD 254 (467)
T ss_pred HHHHHH----HcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEecCCCCeeEECCC
Confidence 887655 789999999999987 467888887 7999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|+++
T Consensus 255 ADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 334 (467)
T TIGR01804 255 ADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGPLISAEHRDKVESYIEKG 334 (467)
T ss_pred CCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCccCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
.++|+++++||.....+....|.|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 335 ~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~ 414 (467)
T TIGR01804 335 KEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIARANDTIYGLAAGVFTADL 414 (467)
T ss_pred HHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEECCCH
Confidence 99999999999743221123588999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhce
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 452 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k 452 (522)
+++.++++++++|+|+||++... .+.+||||+|+||+|++||++|+++||+.|
T Consensus 415 ~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 415 GRAHRVANQLKAGTVWINDFHPY--PAEAPWGGYKQSGIGRENGKAGLAEYTEVK 467 (467)
T ss_pred HHHHHHHHhCCcceEEECCCCCC--CCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence 99999999999999999986543 356899999999999999999999999875
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-91 Score=743.01 Aligned_cols=443 Identities=30% Similarity=0.466 Sum_probs=411.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHH--hhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~--w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
|+++++++.++.++++.++++|++|++. |+++|..+|.++|++++++|++++++|++++++|+||+..++...|+..+
T Consensus 24 g~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~ 103 (471)
T cd07139 24 EEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGP 103 (471)
T ss_pred CCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 6899999999999999999999999985 99999999999999999999999999999999999999988766799999
Q ss_pred HHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++.++++++..+++...+..+.. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~~ 180 (471)
T cd07139 104 AALLRYYAALARDFPFEERRPGS---GGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDA 180 (471)
T ss_pred HHHHHHHHHHHHHhcCCccccCC---CCceEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcCCHHH
Confidence 99999999887766443322221 234567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
..+.+++. ++|+|+|++++|+|+.+.+..|+. .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++
T Consensus 181 ~~l~~~~~----~aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~~~~~~~lElGG~np~iV~~ 256 (471)
T cd07139 181 YLLAEAAE----EAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERLARVTLELGGKSAAIVLD 256 (471)
T ss_pred HHHHHHHH----HcCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCEEEEEcCCCCeeEECC
Confidence 87777654 789999999999997677888887 799999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++
T Consensus 257 dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 336 (471)
T cd07139 257 DADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAK 336 (471)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
+..+|+++++||..... ...++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 337 a~~~ga~v~~gg~~~~~--~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~s~d 414 (471)
T cd07139 337 GRAEGARLVTGGGRPAG--LDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTAD 414 (471)
T ss_pred HHHCCCEEEeCCCcCCC--CCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 99999999999974221 1358899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
.+.+.++++++++|.|+||+.. ..+.+||||+|.||+|++||++|+++||+.|+|+
T Consensus 415 ~~~~~~~~~~l~~G~v~iN~~~---~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~ 470 (471)
T cd07139 415 VERGLAVARRIRTGTVGVNGFR---LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470 (471)
T ss_pred HHHHHHHHHhCCcceEEECCCC---CCCCCCCCCcccccCCccchHHHHHHHhceeEEe
Confidence 9999999999999999999865 2456999999999999999999999999999985
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-91 Score=734.47 Aligned_cols=426 Identities=31% Similarity=0.564 Sum_probs=399.6
Q ss_pred HHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHccccccC
Q 009919 15 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK 94 (522)
Q Consensus 15 v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~ 94 (522)
++++++.|++|++.|+++|.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++.+++++..+++++.
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~ 79 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEAR-AEVEKCAWICRYYAENAEAFLA 79 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC
Confidence 468999999999999999999999999999999999999999999999999999996 6999999999999999888876
Q ss_pred cccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcCC
Q 009919 95 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 174 (522)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag~ 174 (522)
+...+.+ +...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++. ++|+
T Consensus 80 ~~~~~~~----~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~----~agl 151 (429)
T cd07100 80 DEPIETD----AGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFR----EAGF 151 (429)
T ss_pred CeeccCC----CceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH----HcCC
Confidence 5544332 3456789999999999999999999999999999999999999999999999988777755 7899
Q ss_pred CCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHHHHHH
Q 009919 175 PENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAAL 252 (522)
Q Consensus 175 p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~~~~~ 252 (522)
|+|++++|+|+.+.+..|+. ++|.|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.|++++|
T Consensus 152 P~gvv~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~ 231 (429)
T cd07100 152 PEGVFQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRL 231 (429)
T ss_pred CcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHH
Confidence 99999999997777788887 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCCCC
Q 009919 253 QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH 332 (522)
Q Consensus 253 ~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~ 332 (522)
.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||...
T Consensus 232 ~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~- 310 (429)
T cd07100 232 QNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRP- 310 (429)
T ss_pred hccCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999742
Q ss_pred CCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhccCCe
Q 009919 333 LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 412 (522)
Q Consensus 333 ~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~~G~v 412 (522)
+..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|
T Consensus 311 ---~~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v 387 (429)
T cd07100 311 ---DGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMV 387 (429)
T ss_pred ---CCCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeE
Confidence 23589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 413 AINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 413 ~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
+||++... .+.+||||+|.||+|++||+++|++||+.|+|+
T Consensus 388 ~iN~~~~~--~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 388 FINGMVKS--DPRLPFGGVKRSGYGRELGRFGIREFVNIKTVW 428 (429)
T ss_pred EECCCCCC--CCCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence 99987643 356899999999999999999999999999974
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-91 Score=745.71 Aligned_cols=446 Identities=23% Similarity=0.349 Sum_probs=409.6
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH-HhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYII-EHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~-~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
|+++++++.++.+++++++++|++|++.|+.+|..+|.++|++++++|+ +++++|+++++.|+||+..++...++...+
T Consensus 57 g~~i~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i 136 (533)
T TIGR01236 57 QAVLAKATNATEEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGPYREEILAATMLGQSKNVYQAEIDAVAELI 136 (533)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHcCCcHHHHhHhHHHHHH
Confidence 5899999999999999999999999999999999999999999999999 599999999999999999998654588999
Q ss_pred HHHHHHHHccccccCcccccCCcccccccceEEEeec-eEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 80 EKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 80 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
+.+++++..++++........ ..+..+++.++|+ |||++|+|||||+....+.+++|| +||+||+|||+.+|.++
T Consensus 137 ~~~~~~a~~a~~~~~~~~~~~---~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~AL-aGN~VVlKPs~~tp~~~ 212 (533)
T TIGR01236 137 DFFRFNVKYARELYEQQPSES---APGEWNRTDYRPLEGFVYAISPFNFTAIAGNLPGAPAL-MGNTVIWKPSITATLSN 212 (533)
T ss_pred HHHHHHHHHHHHhcCccccCC---CCCceeEEEEecCCCEEEEEeCCchHHHHHHHHHHHHH-hCCeEEEECCCcCCHHH
Confidence 999999987766543221011 1234578999999 999999999999999999999999 79999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCc------eeeeCCCc
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP------VTLELGGK 229 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~p------v~lelgGk 229 (522)
..+.+++. ++|+|+|+||+|+|++ +.++.|+. ++|.|+||||+.+|+.|++.++++++| +++|||||
T Consensus 213 ~~l~~~~~----~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGk 288 (533)
T TIGR01236 213 YLTMRILE----EAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLWKWVASNLDRYHNFPRIVGETGGK 288 (533)
T ss_pred HHHHHHHH----hcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhhccccccCCcEEEEcCCC
Confidence 98888765 7899999999999964 77888886 999999999999999999999999874 99999999
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHH
Q 009919 230 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 309 (522)
Q Consensus 230 ~p~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~ 309 (522)
||+||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++++
T Consensus 289 np~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~ 368 (533)
T TIGR01236 289 DFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAEVKVGDPDDFSNFMGAVIDERSFVK 368 (533)
T ss_pred CeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcC--CcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCC--HHHHHHHH-hcC
Q 009919 310 LQNLVNDALDKG--AEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVKLA-NDS 384 (522)
Q Consensus 310 ~~~~i~~a~~~G--a~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~-n~~ 384 (522)
+.++++++.++| +++++||... ...|+|++|||+.+++++|++++||+||||++|++|+| +||||+++ |++
T Consensus 369 v~~~i~~a~~~Ga~a~vl~GG~~~----~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~ 444 (533)
T TIGR01236 369 NVKYIERAKGDPAELTILYGGKYD----DSEGYFVEPTVILSKDPTDPLMVEEIFGPVLTVYVYPDDKYKEILDVVDSTS 444 (533)
T ss_pred HHHHHHHHHhcCCceEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhcccCCCCeEEEEEeCCCCHHHHHHHHhcCC
Confidence 999999999987 7999998731 23589999999999999999999999999999999998 59999999 889
Q ss_pred CCCceeEEecCcHHHHHHHHHHhc--cCCeeecCCcccCCCCCCCccCCCCCCCC-CcchHHHHHhchhceEEEEcc
Q 009919 385 RYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 385 ~~gL~a~v~s~d~~~~~~~~~~l~--~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~~l~~ft~~k~v~~~~ 458 (522)
+|||++||||+|.+.+.+++++++ +|.|+||+...+...+.+||||+|.||+| +.+|.+|+++||+.|++....
T Consensus 445 ~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 445 RYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGGPLNLLRWTSARSIKETF 521 (533)
T ss_pred CcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhcceEEEEEEc
Confidence 999999999999999999999977 99999998776665567899999999998 899999999999999998755
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-91 Score=737.96 Aligned_cols=442 Identities=30% Similarity=0.476 Sum_probs=408.7
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHH--hhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~--w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
|+++++++.++.+|++++++.|++|++. |+++|.++|.++|++++++|++++++|++++++|+||+..++. .|+..+
T Consensus 7 ~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~ 85 (454)
T cd07118 7 GVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQAR-GEIEGA 85 (454)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHH
Confidence 6899999999999999999999999985 9999999999999999999999999999999999999999985 799999
Q ss_pred HHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++.+++++...+++.. ...+. ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++
T Consensus 86 i~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~~ 162 (454)
T cd07118 86 ADLWRYAASLARTLHG-DSYNN--LGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTT 162 (454)
T ss_pred HHHHHHHHHHHHHhcC-ccccc--CCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHHH
Confidence 9999998876544322 11111 11234567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEc
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~ 235 (522)
..+.+++. ++|+|+|++++|+|++ +.++.|++ ++|.|+||||+++|+.|++.++++++|+++|+|||||+||+
T Consensus 163 ~~l~~~~~----~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~~iV~ 238 (454)
T cd07118 163 LMLAELLI----EAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVF 238 (454)
T ss_pred HHHHHHHH----hcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCceEEC
Confidence 98887755 7899999999999875 57888887 89999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 236 ~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
+|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus 239 ~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~ 318 (454)
T cd07118 239 ADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVD 318 (454)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
++.++|+++++||.... ...|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 319 ~a~~~ga~v~~gg~~~~---~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~ 395 (454)
T cd07118 319 AGRAEGATLLLGGERLA---SAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSK 395 (454)
T ss_pred HHHhCCCEEEeCCCCCC---CCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECC
Confidence 99999999999997421 136889999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
|.+.++++++++++|.|+||++.. ..+.+||||+|.||+|++||++|+++||+.|++.
T Consensus 396 d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 396 DIDTALTVARRIRAGTVWVNTFLD--GSPELPFGGFKQSGIGRELGRYGVEEYTELKTVH 453 (454)
T ss_pred CHHHHHHHHHhcCcCEEEECCCCC--CCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 999999999999999999999755 3456999999999999999999999999999974
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-91 Score=738.12 Aligned_cols=439 Identities=29% Similarity=0.439 Sum_probs=409.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.++++++++.|++|++.|++++.++|.++|+++++.|+++.++|+++++.|+||+..++. .|+..+++
T Consensus 9 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 87 (451)
T cd07150 9 GSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAW-FETTFTPE 87 (451)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999885 59999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.+++++...+++... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 88 ~l~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~t~~~ 164 (451)
T cd07150 88 LLRAAAGECRRVRGE-TLPSD--SPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLK 164 (451)
T ss_pred HHHHHHHHHHHhcCc-cccCC--CCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcHHHHH
Confidence 999988776654221 11111 124557899999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+.+++. ++|+|+|++++|+|++ +.++.|+. .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|
T Consensus 165 l~~~~~----~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~d 240 (451)
T cd07150 165 IAEIME----EAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLAD 240 (451)
T ss_pred HHHHHH----HhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCC
Confidence 887764 7899999999999864 67888886 9999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++++
T Consensus 241 adl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a 320 (451)
T cd07150 241 ADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDA 320 (451)
T ss_pred CChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+.+|+++++||. .+|.|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 321 ~~~Ga~vl~gg~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~ 393 (451)
T cd07150 321 VAKGAKLLTGGK-------YDGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDL 393 (451)
T ss_pred HhCCCEEEeCCc-------cCCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCH
Confidence 999999999986 2488999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
++++++++++++|.|+||++..+. .+.+||||+|.||+|++||.+|+++||+.|+|+
T Consensus 394 ~~~~~~~~~l~~G~v~iN~~~~~~-~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~ 450 (451)
T cd07150 394 QRAFKLAERLESGMVHINDPTILD-EAHVPFGGVKASGFGREGGEWSMEEFTELKWIT 450 (451)
T ss_pred HHHHHHHHhcCcCEEEECCCCCCC-CCCCCcCCccccccCcCCcHHHHHHhheeeEEe
Confidence 999999999999999999986653 456899999999999999999999999999985
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-91 Score=738.58 Aligned_cols=439 Identities=29% Similarity=0.460 Sum_probs=409.0
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.++++++++.|++|++.|+++|.++|.++|++++++|.+++++|++++++|+||+..++...|+..+++
T Consensus 24 ~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~ 103 (466)
T cd07138 24 EEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIG 103 (466)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999886568999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.++++..... ....++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.+
T Consensus 104 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~ 175 (466)
T cd07138 104 HLRAAADALKDFEFEER--------RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAII 175 (466)
T ss_pred HHHHHHHhhhhcccccc--------CceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHH
Confidence 99999988776543221 1245678999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+.+++. ++|+|+|+|++|+|++ +.++.|+. .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|
T Consensus 176 l~~~~~----~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~v~lElgG~~p~iV~~d 251 (466)
T cd07138 176 LAEILD----EAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKRVALELGGKSANIILDD 251 (466)
T ss_pred HHHHHH----HcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECCC
Confidence 887765 7899999999999876 57888887 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|+++++||||++++|+|++.|+++++++++|+|.++++++|||+++.+++++.++++++
T Consensus 252 ADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~v~~a 331 (466)
T cd07138 252 ADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKG 331 (466)
T ss_pred CCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCccCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||..... ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 332 ~~~Ga~~l~gg~~~~~-~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~ 410 (466)
T cd07138 332 IEEGARLVAGGPGRPE-GLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADP 410 (466)
T ss_pred HHCCCEEEeCCCcCCC-cCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 9999999999863211 113589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
+.+.++++++++|+|+||+.. ..+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 411 ~~a~~~~~~l~~G~v~iN~~~---~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 411 ERARAVARRLRAGQVHINGAA---FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred HHHHHHHHhcCcceEEECCCC---CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence 999999999999999999853 2456899999999999999999999999999975
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-90 Score=741.20 Aligned_cols=444 Identities=24% Similarity=0.392 Sum_probs=412.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.++++++++.|++|++.|+++|.++|.++|++++++|++++++|+++++.|+||+..++ ..|+..+++
T Consensus 43 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~ 121 (500)
T cd07083 43 SEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNWVEA-IDDVAEAID 121 (500)
T ss_pred CcEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHH-HHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999999999987 479999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.+.++......... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~ 199 (500)
T cd07083 122 FIRYYARAALRLRYPAVEVVP--YPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYK 199 (500)
T ss_pred HHHHHHHHHHHhcCcccccCC--CCCceEEEEEeccceEEEEcCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHH
Confidence 999999988877543321111 124567789999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCC------CceeeeCCCcce
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL------TPVTLELGGKDA 231 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~------~pv~lelgGk~p 231 (522)
+.+++. ++|+|+|+|++|+|++ +.++.|+. .+|.|+||||+.+|+.|++.+++++ +|+++|+|||||
T Consensus 200 l~~~~~----eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~aa~~~~~~~~~~~v~lElgG~~~ 275 (500)
T cd07083 200 VFEIFH----EAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARLAPGQTWFKRLYVETGGKNA 275 (500)
T ss_pred HHHHHH----HcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhhccccccccCcEEEecCCCCe
Confidence 888765 7899999999999964 67888886 9999999999999999999999886 999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHH
Q 009919 232 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 311 (522)
Q Consensus 232 ~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~ 311 (522)
+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.
T Consensus 276 ~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~ 355 (500)
T cd07083 276 IIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVL 355 (500)
T ss_pred EEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecC--CHHHHHHHHhcCCCCce
Q 009919 312 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVVKLANDSRYGLG 389 (522)
Q Consensus 312 ~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gL~ 389 (522)
++++++.++| ++++||... ...|+|++|||+.+++++|.+++||+||||++|++|+ |+||||+++|+++|||+
T Consensus 356 ~~i~~a~~~g-~vl~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~d~~~~eai~~~n~~~~gL~ 430 (500)
T cd07083 356 SYIEHGKNEG-QLVLGGKRL----EGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLT 430 (500)
T ss_pred HHHHHHHhCC-EEEeCCCcC----CCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeCCCCHHHHHHHHhCCCCCce
Confidence 9999998877 899998732 2358899999999999999999999999999999999 99999999999999999
Q ss_pred eEEecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC-CcchHHHHHhchhceEEEE
Q 009919 390 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 390 a~v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~~l~~ft~~k~v~~ 456 (522)
+||||+|.+.+.++++++++|+|+||+...+...+.+||||+|.||+| +.+|++++++||+.|++..
T Consensus 431 ~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~~~~ 498 (500)
T cd07083 431 GGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLEMKAVAE 498 (500)
T ss_pred EEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHHHhhheeEEEE
Confidence 999999999999999999999999999877665567899999999999 5788999999999999875
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-90 Score=735.68 Aligned_cols=439 Identities=28% Similarity=0.454 Sum_probs=407.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.++++++++.|++|+..|+++|.++|.++|++++++|.++.++|++++++|+||+..++. .|+..+++
T Consensus 9 ~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~ 87 (453)
T cd07094 9 GEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDAR-VEVDRAID 87 (453)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999986 69999999
Q ss_pred HHHHHHHccccccCcccccCCc--ccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGR--SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
.++++++++.++... ..+... ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 88 ~l~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~~p~~~ 166 (453)
T cd07094 88 TLRLAAEEAERIRGE-EIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSA 166 (453)
T ss_pred HHHHHHHHHHHhcCc-cccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcchHHH
Confidence 999999887776432 111111 01234567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEc
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~ 235 (522)
..+++++. ++|+|+|++++|+|++ +.++.|++ .+|.|+||||+.+|+.|++.+ +++|+++|+|||||+||+
T Consensus 167 ~~l~~~l~----~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~lelGGk~~~iV~ 240 (453)
T cd07094 167 LELAKILV----EAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALELGGNAPVIVD 240 (453)
T ss_pred HHHHHHHH----HcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEecCCCCceEEC
Confidence 98888766 6799999999999976 45888987 799999999999999999988 689999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 236 ~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
+|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++
T Consensus 241 ~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~ 320 (453)
T cd07094 241 RDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVE 320 (453)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
+++++|+++++||. .++.|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 321 ~a~~~Ga~v~~gg~-------~~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~ 393 (453)
T cd07094 321 EAVEAGARLLCGGE-------RDGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTR 393 (453)
T ss_pred HHHHCCCEEEeCcc-------CCCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECC
Confidence 99999999999986 25789999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
|.+++.++++++++|+|+||++... ..+.+||||+|+||+|++||++|+++||+.|+|+
T Consensus 394 d~~~a~~~~~~l~~g~v~iN~~~~~-~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 394 DLNVAFKAAEKLEVGGVMVNDSSAF-RTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452 (453)
T ss_pred CHHHHHHHHHhcCcCeEEEcCCCCC-CCCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence 9999999999999999999998543 3356999999999999999999999999999985
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-90 Score=734.84 Aligned_cols=440 Identities=26% Similarity=0.415 Sum_probs=406.7
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+++|.++|.++|++++++|.+++++|++++++|+||+..++. .|+..+++
T Consensus 9 ~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~ 87 (452)
T cd07147 9 GEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDAR-GEVARAID 87 (452)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999986 59999999
Q ss_pred HHHHHHHccccccCcccc-cCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHH
Q 009919 81 KITWLLSEGEKWLKPEYR-SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGC 159 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~ 159 (522)
.++++++.+.++...... .......+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~ 167 (452)
T cd07147 88 TFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSAL 167 (452)
T ss_pred HHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 999998877665322111 0000012345678899999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 160 FYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 160 ~l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
++.+++. ++|+|+|+|++++|+.+.+..|+. .+|.|+||||+.+|+.|++.+++ +|+++|+|||||+||++|
T Consensus 168 ~l~~~l~----~ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~--~~v~lelgG~~p~iV~~d 241 (452)
T cd07147 168 ILGEVLA----ETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK--KKVVLELGGNAAVIVDSD 241 (452)
T ss_pred HHHHHHH----HcCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc--CceEeecCCCCcEEECCC
Confidence 8888765 689999999999997778888886 89999999999999999998773 799999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++++++
T Consensus 242 adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 321 (452)
T cd07147 242 ADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEA 321 (452)
T ss_pred CCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||. .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 322 ~~~Ga~~l~gg~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~ 394 (452)
T cd07147 322 VDAGAKLLTGGK-------RDGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDL 394 (452)
T ss_pred HHCCCEEEecCC-------cCCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCH
Confidence 999999999987 2488999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
++++++++++++|+|+||+.+... ...+||||+|+||+|++||++||++||+.|+|+
T Consensus 395 ~~a~~~~~~~~~G~v~vN~~~~~~-~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~ 451 (452)
T cd07147 395 EKALRAWDELEVGGVVINDVPTFR-VDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLV 451 (452)
T ss_pred HHHHHHHHHcCcceEEECCCCCCC-CCCCCcCCccccccCCCChHHHHHHhcceeEEe
Confidence 999999999999999999976433 346899999999999999999999999999985
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-90 Score=741.99 Aligned_cols=442 Identities=25% Similarity=0.398 Sum_probs=410.6
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.++++++++.|++|++.|++++.++|.++|++++++|.+++++|++++++|+||+..++. .|+..+++
T Consensus 61 ~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 139 (514)
T PRK03137 61 SEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEAD-ADTAEAID 139 (514)
T ss_pred CceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++++.++........ ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..
T Consensus 140 ~~~~~a~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~ 216 (514)
T PRK03137 140 FLEYYARQMLKLADGKPVES---RPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAK 216 (514)
T ss_pred HHHHHHHHHHHhcCCccccC---CCCceEEEEEecCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHH
Confidence 99999988877653332211 134567899999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhc------CCCceeeeCCCcce
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK------TLTPVTLELGGKDA 231 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~------~~~pv~lelgGk~p 231 (522)
+.+++. ++|+|+|++++|+|++ +.++.|++ .+|.|+||||+.+|+.|++.+++ ++||+++|||||||
T Consensus 217 l~~~l~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~l~~v~lElgGk~~ 292 (514)
T PRK03137 217 FVEVLE----EAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDA 292 (514)
T ss_pred HHHHHH----HhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHHhcccccccccceEEecCCCCCe
Confidence 887665 7899999999999965 67888887 89999999999999999999987 78999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHH
Q 009919 232 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 311 (522)
Q Consensus 232 ~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~ 311 (522)
+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++. ++||++++.+++++.
T Consensus 293 ~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~-~~Gpli~~~~~~~v~ 371 (514)
T PRK03137 293 IVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVGNPEDNA-YMGPVINQASFDKIM 371 (514)
T ss_pred EEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCcc-CcCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999888 999999999999999
Q ss_pred HHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeE
Q 009919 312 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 391 (522)
Q Consensus 312 ~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~ 391 (522)
++++++.++ +++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++|
T Consensus 372 ~~v~~a~~~-~~vl~Gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~ 446 (514)
T PRK03137 372 SYIEIGKEE-GRLVLGGEGD----DSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGA 446 (514)
T ss_pred HHHHHHHhC-CEEEeCCCcC----CCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEE
Confidence 999999877 6999998731 23589999999999999999999999999999999999999999999999999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC-CcchHHHHHhchhceEEEE
Q 009919 392 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 392 v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~~l~~ft~~k~v~~ 456 (522)
|||+|.+.++++++++++|+|+||+...+...+.+||||+|.||+| +.+|.+++++||+.|+|..
T Consensus 447 v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~k~v~~ 512 (514)
T PRK03137 447 VISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAKTVSE 512 (514)
T ss_pred EEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhceEEEEEE
Confidence 9999999999999999999999999766665566899999999999 6889999999999999864
|
|
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-90 Score=738.76 Aligned_cols=441 Identities=30% Similarity=0.511 Sum_probs=407.6
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhh--cCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWA--KSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~--~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
|+++++++.++.++++.+++.|++|++.|+ +++.++|.++|+++++.|.+++++|++++++|+||+..++...|+..+
T Consensus 29 ~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~ 108 (476)
T cd07091 29 EEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALS 108 (476)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 688999999999999999999999999855 999999999999999999999999999999999999877766799999
Q ss_pred HHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++.++++++..++.... ..+.. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 109 ~~~~~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~~ 184 (476)
T cd07091 109 IKCLRYYAGWADKIQGK-TIPID---GNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSA 184 (476)
T ss_pred HHHHHHHHHHHHHhcCc-cccCC---CCceEEEEEeceeEEEEECCCcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHHH
Confidence 99999988765443221 11111 234567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhc-CCCceeeeCCCcceEEE
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK-TLTPVTLELGGKDAFIV 234 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~-~~~pv~lelgGk~p~iV 234 (522)
..+.+++. ++|+|+|++++|+|++ +.++.|+. .+|.|+||||+.+|+.|++.+++ +++|+++|||||||+||
T Consensus 185 ~~l~~~~~----~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~~lElgG~~~~iV 260 (476)
T cd07091 185 LYLAELIK----EAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTLELGGKSPNIV 260 (476)
T ss_pred HHHHHHHH----HcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEEecCCCCeEEE
Confidence 88887765 7899999999999865 56788886 89999999999999999999998 89999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i 314 (522)
++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++
T Consensus 261 ~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i 340 (476)
T cd07091 261 FDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYI 340 (476)
T ss_pred CCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCcCCCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEec
Q 009919 315 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 394 (522)
Q Consensus 315 ~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s 394 (522)
++++++|+++++||... ...++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 341 ~~a~~~ga~vl~gg~~~----~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t 416 (476)
T cd07091 341 ESGKKEGATLLTGGERH----GSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFT 416 (476)
T ss_pred HHHHHCCCEEEeCCCCC----CCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999742 23688999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 395 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 395 ~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
+|.+.++++++++++|+|+||++.. ..+.+||||+|+||+|++||++|+++||+.|+|.
T Consensus 417 ~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~ 475 (476)
T cd07091 417 KDINKALRVSRALKAGTVWVNTYNV--FDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVT 475 (476)
T ss_pred CCHHHHHHHHHhcCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHhhceeEEe
Confidence 9999999999999999999998643 3456899999999999999999999999999985
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-90 Score=737.40 Aligned_cols=448 Identities=30% Similarity=0.485 Sum_probs=411.8
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|++++.++|.++|++++++|.+++++|++++++|+||+..++. .|+..+++
T Consensus 25 ~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~-~ev~~~i~ 103 (478)
T cd07131 25 EEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELARLVTREMGKPLAEGR-GDVQEAID 103 (478)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999986 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.+++++...++.. .+..+.. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..
T Consensus 104 ~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~ 180 (478)
T cd07131 104 MAQYAAGEGRRLF-GETVPSE--LPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALK 180 (478)
T ss_pred HHHHHHHHHHHhC-CcccccC--CCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHH
Confidence 9999888776532 2222211 123356899999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+.+++. ++|+|+|++++|+|++ +.++.|+. .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|
T Consensus 181 l~~~l~----~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~d 256 (478)
T cd07131 181 LVELFA----EAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKRVALEMGGKNPIIVMDD 256 (478)
T ss_pred HHHHHH----hcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeEEECCC
Confidence 887755 7899999999999966 47888886 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++|
T Consensus 257 ADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 336 (478)
T cd07131 257 ADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIG 336 (478)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 337 ~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~ 416 (478)
T cd07131 337 KEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDV 416 (478)
T ss_pred HHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCH
Confidence 99999999999753221124688999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC-CcchHHHHHhchhceEEEEc
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~~l~~ft~~k~v~~~ 457 (522)
++++++++++++|+|+||+...+. .+.+||||+|+||+| +.+|++|+++||+.|+|+.+
T Consensus 417 ~~a~~~~~~l~~G~v~iN~~~~~~-~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07131 417 NKAFRARRDLEAGITYVNAPTIGA-EVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVD 476 (478)
T ss_pred HHHHHHHHhcCccEEEECCCCCCC-CCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEEe
Confidence 999999999999999999976543 456999999999999 77789999999999999753
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-90 Score=735.91 Aligned_cols=443 Identities=30% Similarity=0.485 Sum_probs=410.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH--HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~--~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
||++++++.++.++++++++.|++|++ .|+.+|.++|.++|++++++|++++++|++++++|+||+..++...|+..+
T Consensus 12 ~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 91 (462)
T cd07112 12 GRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPISDALAVDVPSA 91 (462)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 689999999999999999999999998 499999999999999999999999999999999999999999865699999
Q ss_pred HHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++.++++++.++++.... .+.. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 92 ~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~ 167 (462)
T cd07112 92 ANTFRWYAEAIDKVYGEV-APTG---PDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTA 167 (462)
T ss_pred HHHHHHHHHHHHHhcCce-ecCC---CCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCCCCCHHH
Confidence 999999999887765421 1111 234567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHh-cCCCceeeeCCCcceEEE
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELGGKDAFIV 234 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa-~~~~pv~lelgGk~p~iV 234 (522)
..+.+++. ++|+|+|++++|+|++ +.++.|+. .+|.|+||||+.+|+.|++.++ .++||+++|+|||||+||
T Consensus 168 ~~l~~~~~----~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~iV 243 (462)
T cd07112 168 LRLAELAL----EAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPNIV 243 (462)
T ss_pred HHHHHHHH----hcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeEEE
Confidence 98887754 7899999999999965 67888886 9999999999999999999998 489999999999999999
Q ss_pred cCCC-CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHH
Q 009919 235 CDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 313 (522)
Q Consensus 235 ~~da-Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~ 313 (522)
++|+ |++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus 244 ~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~ 323 (462)
T cd07112 244 FADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGY 323 (462)
T ss_pred CCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEe
Q 009919 314 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 393 (522)
Q Consensus 314 i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~ 393 (522)
|++++++|+++++||..... ...|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++|||
T Consensus 324 v~~a~~~Ga~v~~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~ 401 (462)
T cd07112 324 IESGKAEGARLVAGGKRVLT--ETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVW 401 (462)
T ss_pred HHHHHHCCCEEEeCCccCCC--CCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEE
Confidence 99999999999999873211 2358899999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 394 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 394 s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
|+|.+.+.++++++++|+|+||++.. ..+.+||||+|.||+|++||++|+++||+.|++.
T Consensus 402 t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 461 (462)
T cd07112 402 TSDLSRAHRVARRLRAGTVWVNCFDE--GDITTPFGGFKQSGNGRDKSLHALDKYTELKTTW 461 (462)
T ss_pred cCCHHHHHHHHHhcCcceEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHHhceeEEE
Confidence 99999999999999999999998644 3456899999999999999999999999999985
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-91 Score=728.52 Aligned_cols=440 Identities=29% Similarity=0.472 Sum_probs=401.7
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHccccccCcc
Q 009919 17 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE 96 (522)
Q Consensus 17 ~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~ 96 (522)
+.++.|++||+.|++++..+|.++|++++++|+++.++|+++++.|+||++.++...|+..+++.++++++.++.+...+
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK 81 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 56889999999999999999999999999999999999999999999999999976799999999999998887776543
Q ss_pred cccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCC
Q 009919 97 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 176 (522)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag~p~ 176 (522)
.........+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+ + +|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~----a-lP~ 156 (449)
T cd07136 82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEE----T-FDE 156 (449)
T ss_pred ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHH----h-CCC
Confidence 32221111244678899999999999999999999999999999999999999999999999998888764 4 999
Q ss_pred CcEeeecCcchhhhhHhc-CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHHHHHHHcC
Q 009919 177 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS 255 (522)
Q Consensus 177 g~v~vv~g~~~~~~~L~~-~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~~~~~~n~ 255 (522)
|++|+|+|+.+.+..|++ .+|.|.||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+
T Consensus 157 gv~~~v~g~~~~~~~L~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~ 236 (449)
T cd07136 157 EYVAVVEGGVEENQELLDQKFDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNA 236 (449)
T ss_pred CEEEEEeCChHHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHccc
Confidence 999999997778888988 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCCCCCCC
Q 009919 256 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 335 (522)
Q Consensus 256 Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~ 335 (522)
||.|+++++||||++++|+|+++|++++++++.|+|.+ ++++||++++.+++++.++|++ +++++||..
T Consensus 237 GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~-----a~~~~gG~~----- 305 (449)
T cd07136 237 GQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDN-----GKIVFGGNT----- 305 (449)
T ss_pred CCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhc-----ceEEECCCc-----
Confidence 99999999999999999999999999999999999886 8899999999999999999976 389999973
Q ss_pred CCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhccCCeeec
Q 009919 336 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 415 (522)
Q Consensus 336 ~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~~G~v~IN 415 (522)
+.+|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.++++++++|+|+||
T Consensus 306 ~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN 385 (449)
T cd07136 306 DRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCIN 385 (449)
T ss_pred CCCCCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 23689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcccccccccCCCCCCCCCCCch
Q 009919 416 DFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAEN 478 (522)
Q Consensus 416 ~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~~~~~p~~~~ 478 (522)
+...+...+.+||||+|.||+|+++|++|+++||+.|+|++... .++.++.|||...
T Consensus 386 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~------~~~~~~~~~~~~~ 442 (449)
T cd07136 386 DTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKKST------WFDLPLRYPPYKG 442 (449)
T ss_pred CccccccCCCCCccCcCcccCCcccCHHHHHHhccceEEEEcCC------cCCccccCCCCch
Confidence 87655444678999999999999999999999999999987642 3456788988544
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-90 Score=732.76 Aligned_cols=443 Identities=30% Similarity=0.501 Sum_probs=406.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh-hhhhhhHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM-VDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~-~ea~~~Ei~~~~ 79 (522)
|+++++++.++.+++++++++|++|++.|+++|.++|.++|++++++|.+++++|++++++|+||+. .+++ .|+..++
T Consensus 7 ~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~-~ev~~~~ 85 (457)
T cd07108 7 GQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQAR-PEAAVLA 85 (457)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHH-HHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999999997 5775 7999999
Q ss_pred HHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHH
Q 009919 80 EKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGC 159 (522)
Q Consensus 80 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~ 159 (522)
+.+++++....++ .....+.. .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 86 ~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~ 161 (457)
T cd07108 86 DLFRYFGGLAGEL-KGETLPFG---PDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVL 161 (457)
T ss_pred HHHHHHHHHHHHh-CCceeccC---CCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 9999888765443 22222221 2345678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 160 FYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 160 ~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
.+.+++.++ +|+|++++|+|++ +.++.|++ .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++
T Consensus 162 ~l~~~~~~~-----lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~~iV~~ 236 (457)
T cd07108 162 LLAEILAQV-----LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFP 236 (457)
T ss_pred HHHHHHHHh-----CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECC
Confidence 998888743 8999999999864 67788886 799999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHH-HHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAA-LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 237 daDl~~aa~~i~~~~-~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
|||++.|++.|++++ |.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++++
T Consensus 237 dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~ 316 (457)
T cd07108 237 DADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYID 316 (457)
T ss_pred CCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHH
Confidence 999999999999995 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH-cCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEec
Q 009919 316 DALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 394 (522)
Q Consensus 316 ~a~~-~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s 394 (522)
++++ +|+++++||..........|.|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 317 ~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft 396 (457)
T cd07108 317 LGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWT 396 (457)
T ss_pred HHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEc
Confidence 9998 999999999753222234689999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHH-HHhchhceEEE
Q 009919 395 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEG-LRACCLVKSVV 455 (522)
Q Consensus 395 ~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~-l~~ft~~k~v~ 455 (522)
+|.+.++++++++++|.|+||++... .+.+||||+|+||+|++||.++ +++||+.|+|+
T Consensus 397 ~d~~~a~~~~~~l~~g~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~ 456 (457)
T cd07108 397 RDLGRALRAAHALEAGWVQVNQGGGQ--QPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN 456 (457)
T ss_pred CCHHHHHHHHHhcCcceEEECCCCCC--CCCCCcCCcccCcCCCCccchhHHHHhhceEEEe
Confidence 99999999999999999999997543 4569999999999999999977 69999999985
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-90 Score=736.51 Aligned_cols=440 Identities=28% Similarity=0.491 Sum_probs=408.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH--HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~--~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
||++++++.++.+++++++++|++|+. .|+++|.++|.++|++++++|.+++++|++++++|+||+..++...|+..+
T Consensus 45 g~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~ 124 (494)
T PRK09847 45 QAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGA 124 (494)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 689999999999999999999999997 599999999999999999999999999999999999999988766799999
Q ss_pred HHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++.++++++.++++.... .+.. .+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++
T Consensus 125 ~~~l~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~ 200 (494)
T PRK09847 125 ARAIRWYAEAIDKVYGEV-ATTS---SHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSA 200 (494)
T ss_pred HHHHHHHHHHHHHhcCcc-ccCC---CCceeEEEecceeEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCChHHH
Confidence 999999998887764322 1111 233457899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHh-cCCCceeeeCCCcceEEE
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELGGKDAFIV 234 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa-~~~~pv~lelgGk~p~iV 234 (522)
..+++++. ++|+|+|++|+|+|++ +.+..|+. .+|.|+||||+.+|+.|++.++ ++++|+++|+|||||+||
T Consensus 201 ~~l~~~~~----~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~~~~~~~~lElGGk~~~iV 276 (494)
T PRK09847 201 IRLAGLAK----EAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIV 276 (494)
T ss_pred HHHHHHHH----HcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhhCCCeEEEecCCCCeeEE
Confidence 88887654 7899999999999864 67888887 7999999999999999999998 589999999999999999
Q ss_pred cCCC-CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHH
Q 009919 235 CDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 313 (522)
Q Consensus 235 ~~da-Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~ 313 (522)
++|+ |++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++.+|||+++.+++++.++
T Consensus 277 ~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~ 356 (494)
T PRK09847 277 FADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSF 356 (494)
T ss_pred cCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCcCHHHHHHHHHH
Confidence 9997 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEe
Q 009919 314 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 393 (522)
Q Consensus 314 i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~ 393 (522)
|++++++| ++++||.. ...+.|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 357 v~~a~~~G-~i~~gg~~-----~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~ 430 (494)
T PRK09847 357 IREGESKG-QLLLDGRN-----AGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVW 430 (494)
T ss_pred HHHHHHCC-eEEECCcc-----CCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHHHHHHhCCCCCceEEEE
Confidence 99999999 99999873 2357799999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 394 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 394 s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
|+|.+.+.++++++++|+|+||++... .+.+||||+|.||+|++||.+|+++||+.|+|+.
T Consensus 431 t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~ 491 (494)
T PRK09847 431 TRDLSRAHRMSRRLKAGSVFVNNYNDG--DMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWI 491 (494)
T ss_pred cCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCCcccccCccchHHHHHHhhceEEEEE
Confidence 999999999999999999999996543 3458999999999999999999999999999875
|
|
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-90 Score=735.56 Aligned_cols=440 Identities=28% Similarity=0.433 Sum_probs=403.4
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.++++++++.|++|++.|+.++..+|.++|+++++.|++++++|++++++|+||+..++. .|+..+++
T Consensus 41 ~~~i~~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~Ev~~~~~ 119 (496)
T PLN00412 41 RKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAV-TEVVRSGD 119 (496)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999985 79999999
Q ss_pred HHHHHHHccccccCcccccCCccc----ccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSM----IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASW 156 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~ 156 (522)
.++++++++.+++........... .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.
T Consensus 120 ~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKPs~~t~~ 199 (496)
T PLN00412 120 LISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAV 199 (496)
T ss_pred HHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccCcH
Confidence 999998877666533211110000 1123468899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEE
Q 009919 157 SGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 233 (522)
Q Consensus 157 ~~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~i 233 (522)
++..+++++. ++|+|+|++|+|+|++ +.++.|+. .+|.|.|||| .+|+.|++.++ ++|+++|||||||+|
T Consensus 200 ~~~~l~~~l~----~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v~~~a~--~~~~~lElGG~~p~i 272 (496)
T PLN00412 200 AALHMVHCFH----LAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAISKKAG--MVPLQMELGGKDACI 272 (496)
T ss_pred HHHHHHHHHH----HhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHHHHHhC--CCcEEEEcCCCceEE
Confidence 9988887664 7899999999999865 67788876 7999999999 99999999885 799999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHH
Q 009919 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 313 (522)
Q Consensus 234 V~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~ 313 (522)
|++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++
T Consensus 273 V~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gp~i~~~~~~~v~~~ 351 (496)
T PLN00412 273 VLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPED-DCDITPVVSESSANFIEGL 351 (496)
T ss_pred EcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCCCcc-cCCcCCCcCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999976 7899999999999999999
Q ss_pred HHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEe
Q 009919 314 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 393 (522)
Q Consensus 314 i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~ 393 (522)
|++++.+|+++++||. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 352 i~~a~~~Ga~~l~~~~-------~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~~an~~~~gL~a~v~ 424 (496)
T PLN00412 352 VMDAKEKGATFCQEWK-------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 424 (496)
T ss_pred HHHHHHCCCEEEecCC-------CCCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEE
Confidence 9999999999998765 368999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 394 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 394 s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
|+|.+++.++++++++|+|+||++... ..+.+||||+|.||+|++||++|+++||+.|+++.+
T Consensus 425 t~d~~~a~~~~~~l~~G~v~vN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~ 487 (496)
T PLN00412 425 TRDINKAILISDAMETGTVQINSAPAR-GPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVIN 487 (496)
T ss_pred cCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCCCCCccccccCCCChHHHHHHhcceEEEEEe
Confidence 999999999999999999999997543 334699999999999999999999999999999753
|
|
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-90 Score=735.64 Aligned_cols=442 Identities=25% Similarity=0.409 Sum_probs=405.7
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+++++++++|++|++.|+++|..+|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 25 ~~~i~~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 103 (487)
T PRK09457 25 GEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPLWEAA-TEVTAMIN 103 (487)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999986 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++...++..... .. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..
T Consensus 104 ~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~~ 179 (487)
T PRK09457 104 KIAISIQAYHERTGEKR-SE---MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEL 179 (487)
T ss_pred HHHHHHHHHHHhcCcee-cc---CCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHH
Confidence 99988877666543322 11 123456899999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcC-CCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~-~~pv~lelgGk~p~iV~~d 237 (522)
+.+++. ++|+|+|++++|+|+.+.++.|+. .+|.|+||||+.+|+.|++.++++ .+++++|||||||+||++|
T Consensus 180 l~~l~~----~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~IV~~d 255 (487)
T PRK09457 180 TVKLWQ----QAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEV 255 (487)
T ss_pred HHHHHH----HhCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCCcEEEecCCCCeEEECCC
Confidence 887765 689999999999997678888887 899999999999999999987765 5789999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhH-HHHHHHHHHHHHhccCCCCC-CCCCcccccCCHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY-ALFVSQVAKIVKSVSAGPPL-AGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~-d~f~~~L~~~~~~~~~g~~~-~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
||++.|++.+++++|.|+||.|+++++||||++++ |+|+++|+++++++++|+|. ++++++|||++..+++++.++++
T Consensus 256 ADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~~~Gpli~~~~~~~v~~~i~ 335 (487)
T PRK09457 256 ADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQA 335 (487)
T ss_pred CCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCCccCCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 99999999999999999995 78899999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
+++++|+++++||... +.+|.|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 336 ~a~~~Ga~~~~gg~~~----~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~~N~~~~gL~a~v~t~ 410 (487)
T PRK09457 336 QLLALGGKSLLEMTQL----QAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSD 410 (487)
T ss_pred HHHHCCCEEEeCCCcc----CCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcC
Confidence 9999999999988632 245789999999 79999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
|.+.++++++++++|+|+||+..... .+.+||||+|+||+|+++|..+ .+||..|++....
T Consensus 411 d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~~~~~ 471 (487)
T PRK09457 411 DREDYDQFLLEIRAGIVNWNKPLTGA-SSAAPFGGVGASGNHRPSAYYA-ADYCAYPMASLES 471 (487)
T ss_pred CHHHHHHHHHhCCcceEEEECCCCCC-CCCCCCCCcccccCCCCCchhH-hhheeeeEEEEec
Confidence 99999999999999999999875543 4569999999999999999666 5599999987763
|
|
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-90 Score=733.01 Aligned_cols=442 Identities=31% Similarity=0.507 Sum_probs=409.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.++++++++.|++|++.|+++|.++|.++|+++++.|+++.++|++++++|+||+..++. .|+..+++
T Consensus 23 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~ 101 (468)
T cd07088 23 GEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKLIVEEQGKTLSLAR-VEVEFTAD 101 (468)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999986 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.+++++..+.+..... .+. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 102 ~l~~~~~~a~~~~~~~-~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~~ 178 (468)
T cd07088 102 YIDYMAEWARRIEGEI-IPS--DRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALE 178 (468)
T ss_pred HHHHHHHHHHHhCCcc-ccC--ccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHH
Confidence 9999987655432211 111 1123467889999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+.+++. ++|+|+|++++|+|++ +.++.|+. .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|
T Consensus 179 l~~~~~----~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~d 254 (468)
T cd07088 179 FAELVD----EAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVSLELGGKAPAIVMKD 254 (468)
T ss_pred HHHHHH----HcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCC
Confidence 887765 6899999999999976 46788887 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+++
T Consensus 255 adl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 334 (468)
T cd07088 255 ADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERA 334 (468)
T ss_pred CCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCcccCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||.... ...|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 335 ~~~ga~vl~gg~~~~---~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~ 411 (468)
T cd07088 335 VEAGATLLTGGKRPE---GEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENL 411 (468)
T ss_pred HHCCCEEEeCCCCCC---CCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCH
Confidence 999999999997421 13689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
+.++++++++++|.|+||++.... ...||||+|.||+|++||++|+++||+.|+|.
T Consensus 412 ~~~~~~~~~l~~g~v~iN~~~~~~--~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 412 NTAMRATNELEFGETYINRENFEA--MQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467 (468)
T ss_pred HHHHHHHHhCCcceEEECCCCCCC--CCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 999999999999999999876543 24699999999999999999999999999985
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-90 Score=728.74 Aligned_cols=440 Identities=29% Similarity=0.477 Sum_probs=407.6
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.++++++++.|++|++.|+++|.++|.++|+++++.|.+++++|++++++|+||+..++...|+..+++
T Consensus 7 ~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~i~ 86 (450)
T cd07092 7 GEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDELPGAVD 86 (450)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999998776579999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.+++++...+.+.... .+. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 87 ~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~ 163 (450)
T cd07092 87 NFRFFAGAARTLEGPA-AGE--YLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLL 163 (450)
T ss_pred HHHHHHHHHHHhcCcc-cCc--cCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 9999887655432211 111 1123456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcch-hhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~-~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+.+++. + |+|+|++++|+|+++ .++.|++ .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|
T Consensus 164 l~~~~~----~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p~iV~~d 238 (450)
T cd07092 164 LAELAA----E-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFDD 238 (450)
T ss_pred HHHHHH----h-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECCC
Confidence 888875 4 899999999998764 7888887 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.|++|+|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+++
T Consensus 239 Adl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a 318 (450)
T cd07092 239 ADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERA 318 (450)
T ss_pred CCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
. +|+++++||... ...|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 319 ~-~ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~ 393 (450)
T cd07092 319 P-AHARVLTGGRRA----EGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDV 393 (450)
T ss_pred H-cCCEEEeCCCCC----CCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCH
Confidence 8 999999999742 23689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
+.++++++++++|.|+||++... .+.+||||+|+||+|++||++++++||+.|+|+
T Consensus 394 ~~~~~~~~~l~~g~v~iN~~~~~--~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 394 GRAMRLSARLDFGTVWVNTHIPL--AAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM 449 (450)
T ss_pred HHHHHHHHhcCccEEEECCCCCC--CCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence 99999999999999999987653 456999999999999999999999999999984
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-90 Score=731.02 Aligned_cols=429 Identities=30% Similarity=0.479 Sum_probs=401.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+++|.++|.++|++++++|.+++++|++++++|+||+..+++..|+...++
T Consensus 47 ~~~i~~~~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~ 126 (480)
T cd07111 47 GEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVAR 126 (480)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999987668988888
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++........ .....++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 127 ~~~~~~~~~~~~~--------------~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~ 192 (480)
T cd07111 127 HFYHHAGWAQLLD--------------TELAGWKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALL 192 (480)
T ss_pred HHHHHHHHHHHhc--------------CCcccceecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence 8887765443210 12345789999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+.+++. ++|+|+|++++|+|+.+.+..|+. .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 193 l~~~~~----~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~p~iV~~da 268 (480)
T cd07111 193 FAEICA----EAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTGKKLSLELGGKSPFIVFDDA 268 (480)
T ss_pred HHHHHH----hcCCCcccEEEEeCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhccCCcEEEEcCCCceEEECCCC
Confidence 887654 789999999999997777888887 79999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++
T Consensus 269 Dl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~ 348 (480)
T cd07111 269 DLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGR 348 (480)
T ss_pred CHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccccccCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHH
Q 009919 319 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 398 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 398 (522)
++|+++++||... ...|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 349 ~~ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~ 424 (480)
T cd07111 349 AEGADVFQPGADL----PSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLS 424 (480)
T ss_pred HCCCEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHHHhCCCCCceEEEEcCCHH
Confidence 9999999988632 236899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceE
Q 009919 399 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKS 453 (522)
Q Consensus 399 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~ 453 (522)
.+.++++++++|+|+||+.... .+.+||||+|.||+|++||++|+++||+.|+
T Consensus 425 ~~~~~~~~l~aG~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 425 LALEVALSLKAGVVWINGHNLF--DAAAGFGGYRESGFGREGGKEGLYEYLRPSW 477 (480)
T ss_pred HHHHHHHhCCEeeEEECCCCCC--CCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence 9999999999999999987553 3458999999999999999999999999885
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-90 Score=723.28 Aligned_cols=427 Identities=29% Similarity=0.458 Sum_probs=394.1
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHccccccCcc
Q 009919 17 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE 96 (522)
Q Consensus 17 ~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~ 96 (522)
++++.|++|+..|+.++.++|.++|++++++|++++++|++++++|+||+..++...|+..+++.++++++.+.++..+.
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 82 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE 82 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 47899999999999999999999999999999999999999999999999988865699999999999999887766543
Q ss_pred cccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCC
Q 009919 97 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 176 (522)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag~p~ 176 (522)
....+........++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++.+++.+ ++|+
T Consensus 83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~-----~~P~ 157 (432)
T cd07137 83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPE-----YLDT 157 (432)
T ss_pred ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHH-----hCCc
Confidence 22111111234567899999999999999999999999999999999999999999999999999988874 3999
Q ss_pred CcEeeecCcchhhhhHhc-CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHHHHHH-Hc
Q 009919 177 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAAL-QS 254 (522)
Q Consensus 177 g~v~vv~g~~~~~~~L~~-~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~~~~~-~n 254 (522)
|++|+|+|+.+.++.|+. .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| .|
T Consensus 158 gvv~~v~g~~~~~~~L~~~~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~ 237 (432)
T cd07137 158 KAIKVIEGGVPETTALLEQKWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCN 237 (432)
T ss_pred CeEEEEeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhcc
Confidence 999999997778888988 8999999999999999999999999999999999999999999999999999999999 59
Q ss_pred CCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCCCCCC
Q 009919 255 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 334 (522)
Q Consensus 255 ~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~ 334 (522)
+||.|+++++||||++++|+|+++|+++++++++|+| ++++++|||+++.+++++.++++++.. |+++++||..
T Consensus 238 ~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~---- 311 (432)
T cd07137 238 NGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGER---- 311 (432)
T ss_pred CCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCc----
Confidence 9999999999999999999999999999999999998 468899999999999999999999998 8999999863
Q ss_pred CCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhccCCeee
Q 009919 335 EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 414 (522)
Q Consensus 335 ~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~~G~v~I 414 (522)
+.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+|
T Consensus 312 -~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~i 390 (432)
T cd07137 312 -DEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTF 390 (432)
T ss_pred -CCCCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEE
Confidence 2368999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 415 NDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 415 N~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
|++..+...+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 391 N~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~ 431 (432)
T cd07137 391 NDTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVL 431 (432)
T ss_pred CCccccccCCCCCCCCcCcCcCCccccHHHHHHhccCceee
Confidence 99766544567899999999999999999999999999985
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-89 Score=726.62 Aligned_cols=445 Identities=32% Similarity=0.489 Sum_probs=412.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+++|.++|.++|+++++.|.+++++|++++++|+||+..++...|+..+++
T Consensus 7 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~i~ 86 (455)
T cd07093 7 GEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRDIPRAAA 86 (455)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999998887679999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++...+.. ....... .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 87 ~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~~~~ 162 (455)
T cd07093 87 NFRFFADYILQLD-GESYPQD---GGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWL 162 (455)
T ss_pred HHHHHHHhHHHhC-CccccCC---CCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHHHHH
Confidence 9999988765532 2221111 24566789999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+.+++. ++|+|+|+|++++|++ +.++.|+. ++|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|
T Consensus 163 l~~~l~----~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~d 238 (455)
T cd07093 163 LAELAN----EAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFAD 238 (455)
T ss_pred HHHHHH----hcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCceEECCC
Confidence 887765 7899999999999864 67788887 7999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++++
T Consensus 239 Adl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 318 (455)
T cd07093 239 ADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELA 318 (455)
T ss_pred CCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||.....+....+.|++|||+++++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.
T Consensus 319 ~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~ 398 (455)
T cd07093 319 RAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDL 398 (455)
T ss_pred HHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCH
Confidence 99999999999753222224588999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
+.+++++.++++|.|+||++.... +.+||||+|.||+|++||++|+++||+.|++.
T Consensus 399 ~~~~~~~~~l~~g~v~iN~~~~~~--~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07093 399 GRAHRVARRLEAGTVWVNCWLVRD--LRTPFGGVKASGIGREGGDYSLEFYTELKNVC 454 (455)
T ss_pred HHHHHHHHhCCcceEEECCCCCCC--CCCCcCCCccCcCCCCchHHHHHHHhceeEEe
Confidence 999999999999999999976653 46899999999999999999999999999985
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-90 Score=722.71 Aligned_cols=432 Identities=28% Similarity=0.465 Sum_probs=399.6
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHcc
Q 009919 10 LSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEG 89 (522)
Q Consensus 10 ~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~ 89 (522)
++.+++++++++|++|++.|+.++.++|.++|+++++.|++++++|+++++.|+||+..++...|+..+++.+++++..+
T Consensus 2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~ 81 (436)
T cd07135 2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNL 81 (436)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999986569999999999999988
Q ss_pred ccccCcccccCC-cccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHH
Q 009919 90 EKWLKPEYRSSG-RSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 168 (522)
Q Consensus 90 ~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~ 168 (522)
+++...+..... ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~- 160 (436)
T cd07135 82 KKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK- 160 (436)
T ss_pred HHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH-
Confidence 776544332211 111234678899999999999999999999999999999999999999999999999888888764
Q ss_pred HHhcCCCCCcEeeecCcchhhhhHhc-CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHH
Q 009919 169 LAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA 247 (522)
Q Consensus 169 l~~ag~p~g~v~vv~g~~~~~~~L~~-~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i 247 (522)
|+|+|++++|+|+++....|+. .+|.|.||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+
T Consensus 161 ----~lP~g~v~vv~g~~~~~~~l~~~~vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i 236 (436)
T cd07135 161 ----YLDPDAFQVVQGGVPETTALLEQKFDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRI 236 (436)
T ss_pred ----hCCcCEEEEEcCCchhHHHHHhCCCCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHH
Confidence 6999999999997655566777 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeec
Q 009919 248 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 327 (522)
Q Consensus 248 ~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~g 327 (522)
++++|.|+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||+++..+++++.++++++ |+++++|
T Consensus 237 ~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~g 312 (436)
T cd07135 237 LWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIG 312 (436)
T ss_pred HHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEEC
Confidence 99999999999999999999999999999999999999999999 8999999999999999999999986 8899999
Q ss_pred cCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHh
Q 009919 328 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 407 (522)
Q Consensus 328 G~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l 407 (522)
|.. ...|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++
T Consensus 313 g~~-----~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l 387 (436)
T cd07135 313 GEM-----DEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRT 387 (436)
T ss_pred CCc-----CCCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcC
Confidence 973 236899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 408 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 408 ~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
++|.|+||+...+...+.+||||+|.||+|+++|.+|+++||+.|+|.
T Consensus 388 ~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 388 RSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV 435 (436)
T ss_pred CcCeEEECCccccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence 999999998766555567999999999999999999999999999874
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-89 Score=721.59 Aligned_cols=429 Identities=32% Similarity=0.521 Sum_probs=394.4
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCC-hhhhhhhHHHHHHHHHHHHHHccccccCcc
Q 009919 18 RVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKT-MVDASLGEIMTTCEKITWLLSEGEKWLKPE 96 (522)
Q Consensus 18 ~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~-~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~ 96 (522)
.+++|++|++.|+++|..+|.++|+++++.|++++++|++++++|+||+ ..|+...|+..+++.++++++++.+++.+.
T Consensus 3 ~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~ 82 (434)
T cd07133 3 LLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKPS 82 (434)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5788999999999999999999999999999999999999999999985 567766799999999999999888776654
Q ss_pred cccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCC
Q 009919 97 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 176 (522)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag~p~ 176 (522)
....+....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.+ + +|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~----a-lP~ 157 (434)
T cd07133 83 RRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAE----Y-FDE 157 (434)
T ss_pred ccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH----h-CCc
Confidence 32222112234568999999999999999999999999999999999999999999999999988888764 3 899
Q ss_pred CcEeeecCcchhhhhHhc-CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHHHHHHHcC
Q 009919 177 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS 255 (522)
Q Consensus 177 g~v~vv~g~~~~~~~L~~-~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~~~~~~n~ 255 (522)
|++++|+|+.+.++.|++ .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+
T Consensus 158 g~~~~v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~~ 237 (434)
T cd07133 158 DEVAVVTGGADVAAAFSSLPFDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNA 237 (434)
T ss_pred CeEEEEeCChHHHHHHHhCCCCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhccC
Confidence 999999997777888888 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCCCCCCC
Q 009919 256 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 335 (522)
Q Consensus 256 Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~ 335 (522)
||.|+++++||||++++|+|+++|+++++++++|+ .+++++||++++.+++++.++|++++++|+++++||.... .
T Consensus 238 GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~--~ 313 (434)
T cd07133 238 GQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGE--D 313 (434)
T ss_pred CCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCc--C
Confidence 99999999999999999999999999999998886 4678999999999999999999999999999999987421 1
Q ss_pred CCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhccCCeeec
Q 009919 336 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 415 (522)
Q Consensus 336 ~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~~G~v~IN 415 (522)
..+|.|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||
T Consensus 314 ~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN 393 (434)
T cd07133 314 FAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTIN 393 (434)
T ss_pred CCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 13689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 416 DFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 416 ~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
++..+...+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 394 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 394 DTLLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred CcccccCCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence 9876555567999999999999999999999999999985
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-89 Score=726.24 Aligned_cols=437 Identities=25% Similarity=0.418 Sum_probs=399.8
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.++++++++.|++|+ ..++..+|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 27 ~~~i~~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 102 (472)
T TIGR03250 27 GTVVGTVPKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEISDLITLESGLSKKDSL-YEVGRVAD 102 (472)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999998875 578999999999999999999999999999999999999986 69999999
Q ss_pred HHHHHHHccccccCcccccCCc--ccccccceEEEeec-eEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGR--SMIHKKAKVEFHPL-GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 157 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~-GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~ 157 (522)
.+++++..+.+..... ..... ...+...++.++|+ |||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 103 ~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~ 181 (472)
T TIGR03250 103 VLTFAAAEALRDDGQI-FSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLS 181 (472)
T ss_pred HHHHHHHHHHHhcCcc-cccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHHHHHHHcCCEEEEECCCcchHH
Confidence 9999988776543211 11000 01123467899998 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEE
Q 009919 158 GCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 234 (522)
Q Consensus 158 ~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV 234 (522)
+..+.+++. ++|+|+|++|+|+|++ +.+..|++ ++|.|+||||+.+|+.|++.++ ++|+++|+|||||+||
T Consensus 182 ~~~l~~~~~----~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~--~~~~~lElGGk~p~iV 255 (472)
T TIGR03250 182 ALYLADILY----EAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG--YRRQVLELGGNDPLIV 255 (472)
T ss_pred HHHHHHHHH----HcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhc--CCceEEecCCCCeEEE
Confidence 988877755 7899999999999864 67888887 9999999999999999999876 7899999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i 314 (522)
++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.+++
T Consensus 256 ~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i 335 (472)
T TIGR03250 256 MEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARV 335 (472)
T ss_pred CCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEec
Q 009919 315 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 394 (522)
Q Consensus 315 ~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s 394 (522)
++++++|+++++||. ..|+|++|||+++++++|++++||+||||++|++|+|.||||+++|+++|||++||||
T Consensus 336 ~~a~~~Ga~vl~gg~-------~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t 408 (472)
T TIGR03250 336 NEAIAQGARLLLGNV-------RDGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCT 408 (472)
T ss_pred HHHHHCCCEEEECCC-------cCCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCccceEEEEc
Confidence 999999999999986 2589999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCC-cchHHHHHhchhceEEEE
Q 009919 395 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 395 ~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~-~~g~~~l~~ft~~k~v~~ 456 (522)
+|.+++.++++++++|+|+||+...+. .+.+||||+|+||+|+ .+|.+|+++||+.|+++.
T Consensus 409 ~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~~ 470 (472)
T TIGR03250 409 NRLDYITRFIAELQVGTVNVWEVPGYR-LELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSL 470 (472)
T ss_pred CCHHHHHHHHHHCCcceEEEcCCCCCC-CCCCCCCccccccCCCCCChHHHHHHhhceEEEEE
Confidence 999999999999999999999876543 3458999999999995 566899999999999864
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-89 Score=733.72 Aligned_cols=442 Identities=23% Similarity=0.367 Sum_probs=409.4
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+++++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+||+..++. .|+..+++
T Consensus 57 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~i~ 135 (518)
T cd07125 57 ERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGELIALAAAEAGKTLADAD-AEVREAID 135 (518)
T ss_pred CceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999986 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.+++++.....+.+ .+...+++++|+|||++|+|||||+.+.+.++++||++||+||+|||+.+|+++..
T Consensus 136 ~l~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~ 212 (518)
T cd07125 136 FCRYYAAQARELFSDPELPGP---TGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAAR 212 (518)
T ss_pred HHHHHHHHHHHhcCCccccCC---CCceeEEEEecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHH
Confidence 999999988887654322222 24567899999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcch-hhhhHhc--CccEEEEeCCHHHHHHHHHHHhcC---CCceeeeCCCcceEEE
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKT---LTPVTLELGGKDAFIV 234 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~-~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~---~~pv~lelgGk~p~iV 234 (522)
+.+++. ++|+|+|++++|+|+.+ .+..|+. .+|.|+||||+.+|+.|++.++++ ++|+++|+|||||+||
T Consensus 213 l~~ll~----eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV 288 (518)
T cd07125 213 AVELLH----EAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNAMIV 288 (518)
T ss_pred HHHHHH----HcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhccCCCceEEEEcCCCCeEEE
Confidence 887755 78999999999999764 7888886 899999999999999999998855 8999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i 314 (522)
++|||++.|++.|++|+|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++
T Consensus 289 ~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i 368 (518)
T cd07125 289 DSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHT 368 (518)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecC--CHHHHHHHHhcCCCCceeEE
Q 009919 315 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVVKLANDSRYGLGCAV 392 (522)
Q Consensus 315 ~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gL~a~v 392 (522)
+++.. ++++++||... ...|+|++|||+.++ +|.+++||+||||++|++|+ |+||||+++|+++|||++||
T Consensus 369 ~~a~~-~~~vl~gg~~~----~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~V 441 (518)
T cd07125 369 ELMRG-EAWLIAPAPLD----DGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGI 441 (518)
T ss_pred HHHHh-CCEEEeCCCcC----CCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEE
Confidence 99987 56899988621 126899999999887 89999999999999999999 99999999999999999999
Q ss_pred ecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCC-cchHHHHHhchhceEEEEc
Q 009919 393 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 393 ~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~-~~g~~~l~~ft~~k~v~~~ 457 (522)
||+|.+.++++++++++|+|+||++..+...+.+||||+|.||+|+ .+|++++++||+.|+|+..
T Consensus 442 ft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~~~ 507 (518)
T cd07125 442 HSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTVSLN 507 (518)
T ss_pred EeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEEEEE
Confidence 9999999999999999999999998765555568999999999996 5779999999999999764
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-90 Score=737.16 Aligned_cols=443 Identities=35% Similarity=0.568 Sum_probs=410.8
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+.++..+|.++|++++++|+++.++|++++++|+||+..++.. |+..+++
T Consensus 17 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~ 95 (462)
T PF00171_consen 17 GEVIGEVPSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALETGKPIAEARG-EVDRAID 95 (462)
T ss_dssp ECEEEEEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSSHHHHHH-HHHHHHH
T ss_pred cCEEEEEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhcccccccccccccccccccccc-hhhhhhh
Confidence 688999999999999999999999999999999999999999999999999999999999999999999975 9999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.++++ ..+..+.+ .+...++.++|+|||++|+|||||+.+.+.++++||++||+||+|||+.+|.++.+
T Consensus 96 ~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VVlkps~~~~~~~~~ 171 (462)
T PF00171_consen 96 FLRYYADAARKL-AGEVLPSD---PGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVVLKPSEQAPLTALL 171 (462)
T ss_dssp HHHHHHHHHHHH-TEEEEEES---TTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEEEEEBTTSHHHHHH
T ss_pred hhhhhhhcccce-ehhhcccc---cccccccccccccceeecccccccccccccchhhhhcccccceeeecccccccccc
Confidence 999999988873 33333221 45678899999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+.+++. ++|+|+|++++++|++ +.+..|+. ++|.|+||||+++|+.|++.++++++|+++|+|||||+||++|
T Consensus 172 l~~~~~----~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~d 247 (462)
T PF00171_consen 172 LAELLE----EAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLKPVVLELGGKNPVIVDPD 247 (462)
T ss_dssp HHHHHH----HHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTSEEEEEECEEEEEEE-TT
T ss_pred chhhcc----ccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcccccccccccccccceeeEecc
Confidence 888766 5799999999999965 77888886 9999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++.++++++.++++++
T Consensus 248 aDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 327 (462)
T PF00171_consen 248 ADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKAQRERVKALIEDA 327 (462)
T ss_dssp SHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHHHHHHHHHHH
T ss_pred cccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccchhhhhcccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||. ........|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 328 ~~~ga~v~~gg~-~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~ 406 (462)
T PF00171_consen 328 VAEGAKVLCGGE-PQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGLTASVFSRDE 406 (462)
T ss_dssp HHTTSEEEEETS-SSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEESEEEEECSBH
T ss_pred cccccccccccc-cccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCCCceeEEecccc
Confidence 999999999994 1122356889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEE
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v 454 (522)
+.++++++++++|+|+||++..+.... +||||+|.||+|+++|.+|+++||+.|+|
T Consensus 407 ~~~~~~~~~l~~g~v~iN~~~~~~~~~-~pfgG~~~SG~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 407 SRAERLARRLEAGRVWINDPPTGDPDG-LPFGGFKQSGIGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp HHHHHHHHHSTSSEEEESSSSTGGTTS-SEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred cccccccccccccceeecCCccccccc-CCCCCcccccCCcchHHHHHHHhCCccCC
Confidence 999999999999999999997776655 89999999999999999999999999987
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-89 Score=727.83 Aligned_cols=447 Identities=27% Similarity=0.353 Sum_probs=409.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.++++++++.|++|++.|+++|.++|.++|+++++.|.+++++|+++++.|+||+..++. .|+..+++
T Consensus 26 ~~~i~~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~i~ 104 (477)
T TIGR01722 26 NEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDAL-GDVARGLE 104 (477)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999986 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.+++++.....+.. ...... ..+...+++++|+|||++|+|||||+.+.++.+++||++||+||+|||+.+|.++..
T Consensus 105 ~~~~~~~~~~~~~g-~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~ 181 (477)
T TIGR01722 105 VVEHACGVNSLLKG-ETSTQV--ATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVK 181 (477)
T ss_pred HHHHHHHHHHHhcC-cccccC--CCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHHhcCCEEEeeCcccChHHHHH
Confidence 99998876554322 111110 112345788999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+.+++. ++|+|+|++++|+|+.+.++.|+. .+|.|+||||+.+|+.|.+.++.++||+++|+|||||+||++||
T Consensus 182 l~~~l~----~aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~~~~~v~lElGG~n~~iV~~dA 257 (477)
T TIGR01722 182 LAELFS----EAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRVQALGGAKNHMVVMPDA 257 (477)
T ss_pred HHHHHH----HhCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCceEECCCC
Confidence 776654 789999999999997777888887 89999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.+++++|.|+||.|+++++||||+++ |+|+++|+++++++++|+|.++++++|||++.++++++.+++++++
T Consensus 258 Dl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~~Gp~i~~~~~~~~~~~i~~a~ 336 (477)
T TIGR01722 258 DKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGA 336 (477)
T ss_pred CHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHH
Q 009919 319 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 398 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 398 (522)
++|+++++||.........+|.|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 337 ~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gl~~~v~t~d~~ 416 (477)
T TIGR01722 337 AEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGA 416 (477)
T ss_pred HCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHH
Confidence 99999999997532222246899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC--CcchHHHHHhchhceEEEEc
Q 009919 399 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 399 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G--~~~g~~~l~~ft~~k~v~~~ 457 (522)
.++++++++++|.|+||+.... ..+.+||||+|+||+| +++|++|+++||+.|+++..
T Consensus 417 ~~~~~~~~l~~g~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~~ 476 (477)
T TIGR01722 417 AARRFQHEIEVGQVGVNVPIPV-PLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTR 476 (477)
T ss_pred HHHHHHHhCCeeeEEECCCCCC-CCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEEe
Confidence 9999999999999999985433 3456899999999999 47899999999999998753
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-89 Score=724.86 Aligned_cols=445 Identities=34% Similarity=0.546 Sum_probs=408.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH--HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~--~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
|+++++++.++.++++++++.|++|+. .|+++|.++|.++|++++++|.+++++|++++++|+||+..++. .|+..+
T Consensus 7 g~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev~~~ 85 (457)
T cd07114 7 GEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETR-AQVRYL 85 (457)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-HHHHHH
Confidence 789999999999999999999999997 59999999999999999999999999999999999999999985 699999
Q ss_pred HHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++.+++++...+... ....+. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 86 ~~~~~~~a~~~~~~~-~~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~~~ 162 (457)
T cd07114 86 AEWYRYYAGLADKIE-GAVIPV--DKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPAST 162 (457)
T ss_pred HHHHHHHHHHHHHhc-Cccccc--CCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchHHH
Confidence 999998876554321 111111 11234578899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEc
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~ 235 (522)
..+.+++. ++|+|+|+|++|+|++ +.++.|+. .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||+
T Consensus 163 ~~l~~~l~----~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~ 238 (457)
T cd07114 163 LELAKLAE----EAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVF 238 (457)
T ss_pred HHHHHHHH----HcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCCeeEEC
Confidence 98887765 7899999999999965 57788886 89999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 236 ~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
+|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++++
T Consensus 239 ~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~ 318 (457)
T cd07114 239 DDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVA 318 (457)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
+++++|+++++||.....+....|.|++|||+.++++++.+++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 319 ~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~ 398 (457)
T cd07114 319 RAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTR 398 (457)
T ss_pred HHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECC
Confidence 99999999999997432222235899999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
|.+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|.+|+++||+.|++.
T Consensus 399 d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~ 456 (457)
T cd07114 399 DLARAHRVARAIEAGTVWVNTYRA--LSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW 456 (457)
T ss_pred CHHHHHHHHHhcCcceEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHHhceeEEe
Confidence 999999999999999999998644 3456899999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-89 Score=725.89 Aligned_cols=446 Identities=21% Similarity=0.275 Sum_probs=397.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHH-HHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a-~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
||++++++.++ +|+++++++|++| |+.|+.++.++|.++|++++++|++++++|+++ +.|+||+..++. .|+..++
T Consensus 25 g~~~~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~la~l-~~e~Gkp~~ea~-~Ev~~~~ 101 (513)
T cd07128 25 GEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDLYAL-SAATGATRRDSW-IDIDGGI 101 (513)
T ss_pred CCEEEEEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHH-HHHHHHH
Confidence 78999999876 8999999999998 799999999999999999999999999999996 899999999986 6999999
Q ss_pred HHHHHHHHccccccCccccc-----CCccccc-ccceEEEee-ceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCC
Q 009919 80 EKITWLLSEGEKWLKPEYRS-----SGRSMIH-KKAKVEFHP-LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 152 (522)
Q Consensus 80 ~~l~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~P-~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 152 (522)
+.++|+++.++++..+.... .+....+ ...+++++| +|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 102 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKPs~ 181 (513)
T cd07128 102 GTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPAT 181 (513)
T ss_pred HHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 99999999887765421110 0000001 135678999 5999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHhcC-CCCCcEeeecCcc-hhhhhHhcCccEEEEeCCHHHHHHHHHHH--hcCCCceeeeCCC
Q 009919 153 NASWSGCFYFRIIQAALAAVG-APENLVDVITGFA-ETGEALVSSVDKIIFVGSPGVGRMIMRNA--SKTLTPVTLELGG 228 (522)
Q Consensus 153 ~~~~~~~~l~~~~~~~l~~ag-~p~g~v~vv~g~~-~~~~~L~~~vd~V~ftGS~~~g~~v~~~a--a~~~~pv~lelgG 228 (522)
.+|+++..+.+++. ++| +|+|++++|+|+. +.+..| ..+|+|+||||+++|+.|++.+ +++++|+++||||
T Consensus 182 ~tp~~~~~l~~~~~----eaG~lP~gv~~~v~g~~~~~~~~l-~~~d~v~fTGS~~~G~~i~~~a~~a~~~~~~~lElGG 256 (513)
T cd07128 182 ATAYLTEAVVKDIV----ESGLLPEGALQLICGSVGDLLDHL-GEQDVVAFTGSAATAAKLRAHPNIVARSIRFNAEADS 256 (513)
T ss_pred CCCHHHHHHHHHHH----HhCCCCCCcEEEecCChHHHhccc-CCCCEEEEECCHHHHHHHHHHhhhhccCceEEEeccC
Confidence 99999988888765 789 8999999999864 334433 3789999999999999999985 4889999999999
Q ss_pred cceEEEcCCCC-----HHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCC
Q 009919 229 KDAFIVCDDVD-----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 303 (522)
Q Consensus 229 k~p~iV~~daD-----l~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~ 303 (522)
|||+||++||| ++.+++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||++
T Consensus 257 knp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~lGpli~ 336 (513)
T cd07128 257 LNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVS 336 (513)
T ss_pred cCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHHHHHHHhcccCCCccCCCCcCCCCC
Confidence 99999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCcEeeccCCCC---CCCCCCCcccccEEEecCCC--CCcccccccccceeeeeecCCHHHHH
Q 009919 304 LEHSEKLQNLVNDALDKGAEILARGSFGH---LSEGAVDQYFPPTVIVNVNH--TMKLMQEEAFGPIMPIMKFNTDEEVV 378 (522)
Q Consensus 304 ~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~---~~~~~~~~~~~Ptvl~~~~~--~~~i~~~E~fgPvl~v~~~~~~~eai 378 (522)
+.+++++.++|++++++ +++++||.... .+....|+|++|||+.++++ +|.+++||+||||++|++|+|+||||
T Consensus 337 ~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eE~FGPVl~V~~~~~~deai 415 (513)
T cd07128 337 REQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAI 415 (513)
T ss_pred HHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccchHHhCCCcCCeEEEEeeCCHHHHH
Confidence 99999999999999987 99999997421 11123589999999998887 48999999999999999999999999
Q ss_pred HHHhcCCCCceeEEecCcHHHHHHHHHHhc--cCCeeecCCcc-------cCCCCCCCccCCCCCCCCCcc-hHHHHHhc
Q 009919 379 KLANDSRYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFAS-------NYMCQSLPFGGVKDSGFGRFA-GVEGLRAC 448 (522)
Q Consensus 379 ~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~--~G~v~IN~~~~-------~~~~~~~PfGG~~~SG~G~~~-g~~~l~~f 448 (522)
+++|+++|||++||||+|.+.+++++++++ +|+|+||+..+ ....+.+||||+|.||+|+.+ |.+|+++|
T Consensus 416 ~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~gg~~~l~~~ 495 (513)
T cd07128 416 ELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHY 495 (513)
T ss_pred HHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCCCCCCCcccCCCCcccccHHHHHHh
Confidence 999999999999999999999999999997 99999998642 123456899999999999994 79999999
Q ss_pred hhceEEE
Q 009919 449 CLVKSVV 455 (522)
Q Consensus 449 t~~k~v~ 455 (522)
|+.|+|.
T Consensus 496 ~~~k~v~ 502 (513)
T cd07128 496 MQRTAVQ 502 (513)
T ss_pred heeeeee
Confidence 9999985
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-89 Score=725.06 Aligned_cols=442 Identities=24% Similarity=0.401 Sum_probs=404.4
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+++++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 23 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 101 (484)
T TIGR03240 23 QEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALARVIARETGKPLWETR-TEVASMIG 101 (484)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999986 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.+++++.....+....... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 102 ~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~t~~~ 177 (484)
T TIGR03240 102 KVAISIKAYHERTGESENP----MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEE 177 (484)
T ss_pred HHHHHHHHHHHhcCccccC----CCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccccHHHHH
Confidence 9998877665543221111 123356788999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcC-CCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~-~~pv~lelgGk~p~iV~~d 237 (522)
+.+++. ++|+|+|+|++|+|+.+.++.|+. .+|.|+||||+++|+.|++.++++ .+++++|||||||+||++|
T Consensus 178 l~~~~~----~aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~iV~~d 253 (484)
T TIGR03240 178 TVKLWE----KAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKILALEMGGNNPLIVDEV 253 (484)
T ss_pred HHHHHH----HhCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCCCcEEEECCCCCeEEECCC
Confidence 888765 789999999999997678888887 899999999999999999988765 6889999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhH-HHHHHHHHHHHHhccCCCC-CCCCCcccccCCHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY-ALFVSQVAKIVKSVSAGPP-LAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~-d~f~~~L~~~~~~~~~g~~-~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
||++.|++.+++++|.|+||.|+++++||||++++ |+|+++|++.++++++|+| .++++++|||++.++++++.++++
T Consensus 254 ADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~~gpli~~~~~~~v~~~i~ 333 (484)
T TIGR03240 254 ADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQA 333 (484)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCcccccCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999985 9999999999999999997 477889999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
+++++|+++++||... +..+.|++|||+ +++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 334 ~a~~~Ga~~~~gg~~~----~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~n~~~~gL~~~v~t~ 408 (484)
T TIGR03240 334 KLLALGGKSLLAMRQL----DPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSD 408 (484)
T ss_pred HHHHCCCEEEeCCCcC----CCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcC
Confidence 9999999999988632 235789999999 69999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
|.+.++++++++++|+|+||+...+. .+.+||||+|.||+|+++|.++++ ||..|+++.+.
T Consensus 409 d~~~a~~~~~~l~aG~v~iN~~~~~~-~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~~ 469 (484)
T TIGR03240 409 DRELYDRFLLEIRAGIVNWNKPLTGA-SSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLEA 469 (484)
T ss_pred CHHHHHHHHHhCCcceEEEECCCCCC-CCCCCcCCcccccCCCCCchHHHh-heeeeEEEEec
Confidence 99999999999999999999876553 456899999999999999977766 99999998764
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-89 Score=717.01 Aligned_cols=440 Identities=29% Similarity=0.453 Sum_probs=397.3
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHccccccCcc
Q 009919 17 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE 96 (522)
Q Consensus 17 ~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~ 96 (522)
+++++|++||..|+.++..+|.++|+++++.|++++++|++++++|+||+..++...|+..+++.++++++.+.++....
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE 81 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 57899999999999999999999999999999999999999999999999999877899999999999999888776543
Q ss_pred cccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCC
Q 009919 97 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 176 (522)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag~p~ 176 (522)
.............++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.+ ++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~-----~lp~ 156 (443)
T cd07132 82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPK-----YLDK 156 (443)
T ss_pred cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-----hCCc
Confidence 22221111234678999999999999999999999999999999999999999999999999999988864 3999
Q ss_pred CcEeeecCcchhhhhHhc-CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHHHHHHHcC
Q 009919 177 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS 255 (522)
Q Consensus 177 g~v~vv~g~~~~~~~L~~-~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~~~~~~n~ 255 (522)
|++++++|+.+.+..|+. .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++|.|+
T Consensus 157 gv~~vv~g~~~~~~~l~~~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~ 236 (443)
T cd07132 157 ECYPVVLGGVEETTELLKQRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINA 236 (443)
T ss_pred CeEEEEeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcC
Confidence 999999997766777877 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCCCCCCC
Q 009919 256 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 335 (522)
Q Consensus 256 Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~ 335 (522)
||.|+++++||||++++|+|+++|++++++++.|++ ++++++|||+++++++++.+++++ +++++||..
T Consensus 237 GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~----- 305 (443)
T cd07132 237 GQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQT----- 305 (443)
T ss_pred CCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCcc-----
Confidence 999999999999999999999999999999988877 688899999999999999999863 589999872
Q ss_pred CCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhccCCeeec
Q 009919 336 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 415 (522)
Q Consensus 336 ~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~~G~v~IN 415 (522)
+.++.|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||
T Consensus 306 ~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN 385 (443)
T cd07132 306 DEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVN 385 (443)
T ss_pred CCCCCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 24688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcccccccccCCCCCCCCCCC
Q 009919 416 DFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVA 476 (522)
Q Consensus 416 ~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~~~~~p~~ 476 (522)
++..+...+.+||||+|+||+|+++|.+|+++||+.|+|+.+..+. ..-.+.+|+|+
T Consensus 386 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~~~~----~~~~~~~~~~~ 442 (443)
T cd07132 386 DTIMHYTLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKSLNM----EKLNSLRYPPY 442 (443)
T ss_pred CcccccCCCCCCCCCCCcccCCCcccHHHHHHhccccEEEEccccc----cccccccCCCC
Confidence 9766554467999999999999999999999999999998654200 12235677664
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-88 Score=718.50 Aligned_cols=441 Identities=35% Similarity=0.570 Sum_probs=409.8
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.++++++++.|++|++.|+.+|.++|.++|+++++.|.++.++|+++++.|+||+..+++ .|+..+++
T Consensus 7 g~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~ 85 (451)
T cd07103 7 GEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEAR-GEVDYAAS 85 (451)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999986 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++....++..... .+. ...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..
T Consensus 86 ~l~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~ 162 (451)
T cd07103 86 FLEWFAEEARRIYGRT-IPS--PAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALA 162 (451)
T ss_pred HHHHHHHHHHHhcCcc-ccc--CCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHH
Confidence 9999887765543211 111 1124567899999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+.+++. ++|+|+|++++|+|+. +.++.|+. ++|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++|
T Consensus 163 l~~~l~----~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~d 238 (451)
T cd07103 163 LAELAE----EAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFDD 238 (451)
T ss_pred HHHHHH----HcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCC
Confidence 887765 6899999999999965 56777886 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.|++|+|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++++
T Consensus 239 adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a 318 (451)
T cd07103 239 ADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDA 318 (451)
T ss_pred CCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||... ..+|+|++|||+.++++++.++++|+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 319 ~~~ga~~l~gg~~~----~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~ 394 (451)
T cd07103 319 VAKGAKVLTGGKRL----GLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDL 394 (451)
T ss_pred HHCCCEEEeCCCcC----CCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCH
Confidence 99999999998732 13688999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
+.+++++.++++|.|+||++... .+.+||||+|.||+|+++|++|+++||+.|++.
T Consensus 395 ~~~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 395 ARAWRVAEALEAGMVGINTGLIS--DAEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450 (451)
T ss_pred HHHHHHHHhCCcceEEECCCCCC--CCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence 99999999999999999998643 356899999999999999999999999999874
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-89 Score=713.66 Aligned_cols=423 Identities=26% Similarity=0.417 Sum_probs=390.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHcccccc
Q 009919 14 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWL 93 (522)
Q Consensus 14 ~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~ 93 (522)
+++++++.|++|++.|+.+|.++|.++|+++++.|+++.++|++++++|+||+..++. .|+..+++.++++++...++.
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~ 79 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQ-TEVAAMAGKIDISIKAYHERT 79 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 4789999999999999999999999999999999999999999999999999999985 699999999999988877765
Q ss_pred CcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcC
Q 009919 94 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 173 (522)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag 173 (522)
.+...+. .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+.+++. ++|
T Consensus 80 ~~~~~~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~----~ag 151 (431)
T cd07095 80 GERATPM----AQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWE----EAG 151 (431)
T ss_pred CCcccCC----CCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHH----HhC
Confidence 4433222 24567899999999999999999999999999999999999999999999999988877765 789
Q ss_pred CCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcC-CCceeeeCCCcceEEEcCCCCHHHHHHHHHHH
Q 009919 174 APENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRA 250 (522)
Q Consensus 174 ~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~-~~pv~lelgGk~p~iV~~daDl~~aa~~i~~~ 250 (522)
+|+|++++|+|+.+.+..|++ ++|.|+||||+++|+.|++.++.+ ++++++|+|||||+||++|||++.|++.++++
T Consensus 152 ~P~g~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~ 231 (431)
T cd07095 152 LPPGVLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQS 231 (431)
T ss_pred cChhHheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHH
Confidence 999999999997777888887 799999999999999999987754 69999999999999999999999999999999
Q ss_pred HHHcCCCCcccCCeeEEchh-hHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccC
Q 009919 251 ALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 329 (522)
Q Consensus 251 ~~~n~Gq~C~a~~~v~V~~~-i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~ 329 (522)
+|.|+||.|+++++||||++ ++|+|+++|+++++++++|+|.++++++||+++..+++++.+++++++++|+++++||.
T Consensus 232 ~~~~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~ 311 (431)
T cd07095 232 AFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAME 311 (431)
T ss_pred HHHhCCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCC
Confidence 99999999999999999999 99999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhcc
Q 009919 330 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 409 (522)
Q Consensus 330 ~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~~ 409 (522)
.. +.+|+|++|||+ +++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++
T Consensus 312 ~~----~~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~ 386 (431)
T cd07095 312 RL----VAGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRA 386 (431)
T ss_pred cC----CCCCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCc
Confidence 42 246899999999 6999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhc
Q 009919 410 GVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 451 (522)
Q Consensus 410 G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~ 451 (522)
|.|+||+.... ..+.+||||+|.||+|+.+|.+|++.|+.+
T Consensus 387 G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~ 427 (431)
T cd07095 387 GIVNWNRPTTG-ASSTAPFGGVGLSGNHRPSAYYAADYCAYP 427 (431)
T ss_pred ceEEECCCCCC-CCCCCCCCCcccccCCCCChHHHHHHHhhh
Confidence 99999986553 345699999999999999999999955443
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-88 Score=739.23 Aligned_cols=445 Identities=21% Similarity=0.276 Sum_probs=397.4
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHH-HHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a-~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
|+++++++.++ +|+++++++|++| ++.|+.+|..+|.++|++++++|++++++|++ ++.|+||++.++. .|+..++
T Consensus 25 g~~i~~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-~~~e~GK~~~~a~-~ev~~~~ 101 (663)
T TIGR02278 25 GEVLARVTSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALYA-LAATTGATRRDNW-VDIDGGI 101 (663)
T ss_pred CCEEEEEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHH-HHHHHHH
Confidence 68999999999 6999999999996 99999999999999999999999999999999 5999999999986 6999999
Q ss_pred HHHHHHHHccccccCcccc-c-C---Ccccc-cccceEEEeec-eEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCC
Q 009919 80 EKITWLLSEGEKWLKPEYR-S-S---GRSMI-HKKAKVEFHPL-GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 152 (522)
Q Consensus 80 ~~l~~~~~~~~~~~~~~~~-~-~---~~~~~-~~~~~~~~~P~-GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 152 (522)
+.++++++.+++++.+.+. . . +.... ....++.++|+ |||++|+|||||+.++++++++||++||+||+|||+
T Consensus 102 ~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~Vv~KPs~ 181 (663)
T TIGR02278 102 GTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPAT 181 (663)
T ss_pred HHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 9999999887764322110 0 0 10001 12467999998 999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHhcC-CCCCcEeeecCcc-hhhhhHhcCccEEEEeCCHHHHHHHHHHH--hcCCCceeeeCCC
Q 009919 153 NASWSGCFYFRIIQAALAAVG-APENLVDVITGFA-ETGEALVSSVDKIIFVGSPGVGRMIMRNA--SKTLTPVTLELGG 228 (522)
Q Consensus 153 ~~~~~~~~l~~~~~~~l~~ag-~p~g~v~vv~g~~-~~~~~L~~~vd~V~ftGS~~~g~~v~~~a--a~~~~pv~lelgG 228 (522)
.+|+++.++.+++. ++| +|+|+||+|+|+. +.... +..+|.|+||||+++|+.|++.+ +++++|+++||||
T Consensus 182 ~tp~~~~~l~~~~~----~aG~lP~gv~~~v~g~~~~~~~~-~~~~~~V~FTGS~~~G~~i~~~aaaa~~~~~~~lELGG 256 (663)
T TIGR02278 182 PTAYVAEALVRTMV----ESGLLPEGSLQLICGSAGDLLDH-LDHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADS 256 (663)
T ss_pred cchHHHHHHHHHHH----HhCCCCCCcEEEEeCChHHHHhc-CCCCCEEEEECCHHHHHHHHHhHhHHhcCceEEEEcCC
Confidence 99999988888765 789 9999999999853 22221 13789999999999999999874 4899999999999
Q ss_pred cceEEEcCCCC-----HHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCC
Q 009919 229 KDAFIVCDDVD-----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 303 (522)
Q Consensus 229 k~p~iV~~daD-----l~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~ 303 (522)
|||+||++||| ++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||++
T Consensus 257 k~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~t~~Gpli~ 336 (663)
T TIGR02278 257 LNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVS 336 (663)
T ss_pred CCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCCC
Confidence 99999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCC-cccccccccceeeeeecCCHHHHHHHHh
Q 009919 304 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM-KLMQEEAFGPIMPIMKFNTDEEVVKLAN 382 (522)
Q Consensus 304 ~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~-~i~~~E~fgPvl~v~~~~~~~eai~~~n 382 (522)
+.+++++.++|++++++|+++++||.. ..+|+|++|||+.+++++| .+++||+||||++|++|+|.||||+++|
T Consensus 337 ~~~~~~i~~~i~~a~~~Ga~vl~GG~~-----~~~g~~~~PTvl~~~~~~~~~i~~eE~FGPVl~V~~~~~~~eai~~aN 411 (663)
T TIGR02278 337 LEQRADVEAAVAALLAAGAEVRLGGPG-----RLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAA 411 (663)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEECCCc-----CCCCeeEccEEEeeCCcchhhHHhccccCCeEEEEeeCCHHHHHHHHH
Confidence 999999999999999999999999973 2358999999999998876 7999999999999999999999999999
Q ss_pred cCCCCceeEEecCcHHHHHHHHHHh--ccCCeee-cCCc------ccCCCCCCCccCCCCCCCCCc-chHHHHHhchhce
Q 009919 383 DSRYGLGCAVFSGSQHRAREIAAQI--QCGVAAI-NDFA------SNYMCQSLPFGGVKDSGFGRF-AGVEGLRACCLVK 452 (522)
Q Consensus 383 ~~~~gL~a~v~s~d~~~~~~~~~~l--~~G~v~I-N~~~------~~~~~~~~PfGG~~~SG~G~~-~g~~~l~~ft~~k 452 (522)
+++|||++||||+|.+.++++++++ ++|.|+| |+.. .....+.+||||+|+||+|++ +|.+++++||+.|
T Consensus 412 ~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~g~~~~l~~f~~~k 491 (663)
T TIGR02278 412 RGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGGEELGGLRSVKHYMQRT 491 (663)
T ss_pred cCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCccCcCCCccchHHHHHHhceeE
Confidence 9999999999999999999999999 8999999 6421 112235689999999999999 5789999999999
Q ss_pred EEEEcc
Q 009919 453 SVVEDR 458 (522)
Q Consensus 453 ~v~~~~ 458 (522)
+|..-+
T Consensus 492 ~v~~~~ 497 (663)
T TIGR02278 492 AIQGSP 497 (663)
T ss_pred EEEcCH
Confidence 998755
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-88 Score=716.64 Aligned_cols=439 Identities=30% Similarity=0.475 Sum_probs=404.8
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+++++++++|++|+..|+++|.++|.++|+++++.|.++.++|++++++|+||+..++. .|+..+++
T Consensus 9 g~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~ 87 (453)
T cd07149 9 GEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDAR-KEVDRAIE 87 (453)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 69999999
Q ss_pred HHHHHHHccccccCcccccCCcc--cccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
.++++++.+.++.... .+.... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++
T Consensus 88 ~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~~~p~~~ 166 (453)
T cd07149 88 TLRLSAEEAKRLAGET-IPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSA 166 (453)
T ss_pred HHHHHHHHHHHhcCcc-ccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCCcchHHH
Confidence 9999887766543211 111100 0123457889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcch-hhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEc
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~~-~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~ 235 (522)
..+.+++. ++|+|+|++++|+|+.+ .+..|+. ++|.|+||||+.+|+.|++.++ ++|+++|+|||||+||+
T Consensus 167 ~~l~~~l~----~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelGGk~p~iV~ 240 (453)
T cd07149 167 LKLAELLL----EAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNAAVIVD 240 (453)
T ss_pred HHHHHHHH----HcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeeecCCCceEEEC
Confidence 88887765 68999999999998764 4888887 7999999999999999999875 79999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 236 ~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
+|+|++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++++
T Consensus 241 ~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~ 320 (453)
T cd07149 241 ADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVE 320 (453)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
++..+|+++++||. ..++|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 321 ~a~~~ga~v~~gg~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~ 393 (453)
T cd07149 321 EAVEGGARLLTGGK-------RDGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTN 393 (453)
T ss_pred HHHHCCCEEEeCCC-------CCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcC
Confidence 99999999999987 24789999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
|.+.++++++++++|.|+||+..... ...+||||+|+||+|++||++|+++||+.|+|+
T Consensus 394 d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 394 DLQKALKAARELEVGGVMINDSSTFR-VDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452 (453)
T ss_pred CHHHHHHHHHHcCcCeEEECCCCCCC-CCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence 99999999999999999999976543 346899999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-88 Score=712.08 Aligned_cols=436 Identities=27% Similarity=0.435 Sum_probs=399.8
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+++++++++|+++ |+.++.++|.++|+++++.|++++++|++++++|+||+..++. .|+..+++
T Consensus 9 g~~i~~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 84 (451)
T cd07146 9 GEVVGTVPAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTR-YEVGRAAD 84 (451)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 7899999999999999999998864 8889999999999999999999999999999999999999985 69999999
Q ss_pred HHHHHHHccccccCcccccCCcc--cccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
.++++++....+.. +....... ..+...+++++|+|||++|+|||||+.+.+.++++||++||+||+|||+.+|+++
T Consensus 85 ~l~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~ 163 (451)
T cd07146 85 VLRFAAAEALRDDG-ESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSA 163 (451)
T ss_pred HHHHHHHHHHHhcC-cccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCCchHHH
Confidence 99999887665432 11111100 0234567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEc
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~ 235 (522)
..+.+++. ++|+|+|++++++|++ +.++.|++ .+|.|+||||+.+|+.|++.++ .+|+++|+|||||+||+
T Consensus 164 ~~l~~~l~----~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lElGG~~p~iV~ 237 (451)
T cd07146 164 IYLADLLY----EAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGGNDPLIVM 237 (451)
T ss_pred HHHHHHHH----HcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeeecCCCceEEEC
Confidence 88777654 7899999999999875 66888887 8999999999999999998876 68999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 236 ~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
+|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++++
T Consensus 238 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~ 317 (451)
T cd07146 238 DDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVE 317 (451)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
+++++|+++++||. ..|.|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 318 ~a~~~Ga~vl~gg~-------~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~ 390 (451)
T cd07146 318 EAIAQGARVLLGNQ-------RQGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTN 390 (451)
T ss_pred HHHhCCCEEEeCCC-------cCCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECC
Confidence 99999999999986 24889999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCC-CCcchHHHHHhchhceEEE
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGF-GRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~-G~~~g~~~l~~ft~~k~v~ 455 (522)
|.+.++++++++++|+|+||+.... ..+.+||||+|.||+ |+.+|++|+++||+.|++.
T Consensus 391 d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 391 DLDTIKRLVERLDVGTVNVNEVPGF-RSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450 (451)
T ss_pred CHHHHHHHHHHCCcceEEECCCCCC-CCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence 9999999999999999999997543 334689999999995 8999999999999999974
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-88 Score=710.06 Aligned_cols=429 Identities=31% Similarity=0.526 Sum_probs=397.3
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHccccccCcc
Q 009919 17 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE 96 (522)
Q Consensus 17 ~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~ 96 (522)
+++++|++|++.|+.+|..+|.++|+++++.|++++++|+++++.|+||+..++...|+..+++.+++++.+...+....
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK 81 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 57889999999999999999999999999999999999999999999999999866799999999999988776665543
Q ss_pred cccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCC
Q 009919 97 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 176 (522)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag~p~ 176 (522)
....+....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++.+++.+ + +|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~----a-~p~ 156 (433)
T cd07134 82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIRE----A-FDE 156 (433)
T ss_pred ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH----h-CCc
Confidence 33222222345678999999999999999999999999999999999999999999999999888888764 4 899
Q ss_pred CcEeeecCcchhhhhHhc-CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHHHHHHHcC
Q 009919 177 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS 255 (522)
Q Consensus 177 g~v~vv~g~~~~~~~L~~-~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~~~~~~n~ 255 (522)
|++++++|+.+.+..|++ .+|.|.||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+
T Consensus 157 g~v~~v~g~~~~~~~l~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~ 236 (433)
T cd07134 157 DEVAVFEGDAEVAQALLELPFDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNA 236 (433)
T ss_pred CEEEEEeCChhHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCc
Confidence 999999997788888988 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCCCCCC
Q 009919 256 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP-LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 334 (522)
Q Consensus 256 Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~-~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~ 334 (522)
||.|+++++||||++++|+|+++|+++++.+..|+| .+.++++||++++.+++++.++|++++++|+++++||..
T Consensus 237 GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~---- 312 (433)
T cd07134 237 GQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQF---- 312 (433)
T ss_pred CCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCc----
Confidence 999999999999999999999999999999887776 788889999999999999999999999999999999973
Q ss_pred CCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhccCCeee
Q 009919 335 EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 414 (522)
Q Consensus 335 ~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~~G~v~I 414 (522)
+..++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+|
T Consensus 313 -~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~i 391 (433)
T cd07134 313 -DAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVV 391 (433)
T ss_pred -CCCCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEE
Confidence 2458999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 415 NDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 415 N~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
|+...+...+.+||||+|+||+|+++|++++++||+.|+|.
T Consensus 392 N~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 392 NDVVLHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred CCcccccCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence 99776555567899999999999999999999999999985
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-88 Score=710.41 Aligned_cols=425 Identities=32% Similarity=0.480 Sum_probs=390.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHcccccc
Q 009919 14 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWL 93 (522)
Q Consensus 14 ~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~ 93 (522)
|+++++++|++|++.|+++|.++|.++|++++++|+++.++|++++++|+||+..++. .|+..+++.++++++...++.
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~~~ 79 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAG-FNVDLAAGMLREAASLITQII 79 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 4789999999999999999999999999999999999999999999999999987774 699999999999988776542
Q ss_pred CcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcC
Q 009919 94 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 173 (522)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag 173 (522)
....+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++. ++|
T Consensus 80 -~~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~----~aG 152 (432)
T cd07105 80 -GGSIPSD--KPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFH----EAG 152 (432)
T ss_pred -CeecccC--CCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHH----HcC
Confidence 1222211 123456789999999999999999999999999999999999999999999999988777754 789
Q ss_pred CCCCcEeeecCcc----hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHH
Q 009919 174 APENLVDVITGFA----ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA 247 (522)
Q Consensus 174 ~p~g~v~vv~g~~----~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i 247 (522)
+|+|++|+|+|+. +.++.|++ ++|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.|
T Consensus 153 lP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i 232 (432)
T cd07105 153 LPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAA 232 (432)
T ss_pred cCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHH
Confidence 9999999999853 35788887 69999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeec
Q 009919 248 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 327 (522)
Q Consensus 248 ~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~g 327 (522)
++++|.|+||.|+++++||||++++|+|+++|+++++++++| ++++||++++.+++++.+++++++++|+++++|
T Consensus 233 ~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~g 307 (432)
T cd07105 233 LFGAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVG 307 (432)
T ss_pred HHHHHhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeC
Confidence 999999999999999999999999999999999999999988 579999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHh
Q 009919 328 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 407 (522)
Q Consensus 328 G~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l 407 (522)
|.... ...+.|++|||+.+++++|.+++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++
T Consensus 308 g~~~~---~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l 384 (432)
T cd07105 308 GLADE---SPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRI 384 (432)
T ss_pred CCcCC---CCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 87421 135899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 408 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 408 ~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
++|.|+||++..+. .+.+||||+|+||+|++||++|+++||+.|+|+
T Consensus 385 ~~g~v~vN~~~~~~-~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~ 431 (432)
T cd07105 385 ESGAVHINGMTVHD-EPTLPHGGVKSSGYGRFNGKWGIDEFTETKWIT 431 (432)
T ss_pred CcCeEEECCCCCCC-CCCCCCCCcccccccccChHHHHHHhhceEEEe
Confidence 99999999976553 456999999999999999999999999999985
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-87 Score=709.25 Aligned_cols=426 Identities=33% Similarity=0.512 Sum_probs=393.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHcccccc
Q 009919 14 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWL 93 (522)
Q Consensus 14 ~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~ 93 (522)
|++++++.|++|++.|+++|.++|.++|+++++.|.+++++|++++++|+||+..++. .|+..+++.+++++....+..
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~~~ 79 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAA-FEVGAAIAILREAAGLPRRPE 79 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 4789999999999999999999999999999999999999999999999999998885 699999999999887765432
Q ss_pred CcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHH-HHHHHHHHHHHHHhc
Q 009919 94 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS-GCFYFRIIQAALAAV 172 (522)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~-~~~l~~~~~~~l~~a 172 (522)
. ...+.. ..+..++++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+ +..+. ++|.++
T Consensus 80 ~-~~~~~~--~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~----~~l~~a 152 (431)
T cd07104 80 G-EILPSD--VPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIA----EIFEEA 152 (431)
T ss_pred C-ccccCC--CCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHH----HHHHHc
Confidence 1 111111 134567899999999999999999999999999999999999999999999987 44444 455689
Q ss_pred CCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHHH
Q 009919 173 GAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR 249 (522)
Q Consensus 173 g~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~~ 249 (522)
|+|+|++++++|+. +.++.|+. ++|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.|++
T Consensus 153 GlP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~ 232 (431)
T cd07104 153 GLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAF 232 (431)
T ss_pred CCCcccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHH
Confidence 99999999999875 57888886 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccC
Q 009919 250 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 329 (522)
Q Consensus 250 ~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~ 329 (522)
++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||.
T Consensus 233 ~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~ 312 (431)
T cd07104 233 GAFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGT 312 (431)
T ss_pred HHHhcCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhcc
Q 009919 330 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 409 (522)
Q Consensus 330 ~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~~ 409 (522)
.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++
T Consensus 313 -------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~ 385 (431)
T cd07104 313 -------YEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLET 385 (431)
T ss_pred -------CCCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCc
Confidence 2588999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 410 GVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 410 G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
|.|+||++..+. .+.+||||+|.||+|++||++|+++||+.|+|+
T Consensus 386 g~v~iN~~~~~~-~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 386 GMVHINDQTVND-EPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT 430 (431)
T ss_pred CeEEECCCCCCC-CCCCCCCCcccccCCccchHHHHHHhhceeEEe
Confidence 999999987654 457999999999999999999999999999975
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-87 Score=712.79 Aligned_cols=428 Identities=22% Similarity=0.346 Sum_probs=394.7
Q ss_pred ceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHH
Q 009919 2 KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK 81 (522)
Q Consensus 2 ~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~ 81 (522)
|++++++.++.++++.+++.|++|++.|+++|..+|.++|++++++|++++++|++++++|+||+..++. .|+..+++.
T Consensus 63 e~i~~~~~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~i~~ 141 (500)
T TIGR01238 63 DIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMPELMALCVREAGKTIHNAI-AEVREAVDF 141 (500)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHH
Confidence 7999999999999999999999999999999999999999999999999999999999999999999985 699999999
Q ss_pred HHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHH
Q 009919 82 ITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFY 161 (522)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l 161 (522)
++++++..+.++. ...++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+
T Consensus 142 l~~~a~~~~~~~~---------------~~~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l 206 (500)
T TIGR01238 142 CRYYAKQVRDVLG---------------EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRA 206 (500)
T ss_pred HHHHHHHHHHhcC---------------ceeccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHH
Confidence 9999987654321 1358899999999999999999999999999999999999999999999887
Q ss_pred HHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCC---CceeeeCCCcceEEEc
Q 009919 162 FRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL---TPVTLELGGKDAFIVC 235 (522)
Q Consensus 162 ~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~---~pv~lelgGk~p~iV~ 235 (522)
.+++. ++|+|+|+||+|+|++ +.++.|+. .+|.|+||||+.+|+.|++.+++++ +|+++|+|||||+||+
T Consensus 207 ~~~~~----~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~~v~lElGGknp~IV~ 282 (500)
T TIGR01238 207 VELMQ----EAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVD 282 (500)
T ss_pred HHHHH----HcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhcccCCceEEEecCCcCcEEEC
Confidence 77655 7899999999999875 77888886 9999999999999999999999886 8999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 236 ~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
+|||++.|++.|++|+|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus 283 ~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~ 362 (500)
T TIGR01238 283 STALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIE 362 (500)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecC--CHHHHHHHHhcCCCCceeEEe
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVVKLANDSRYGLGCAVF 393 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gL~a~v~ 393 (522)
++.+.|++++.++.... .....|+|++|||+.+ ++|.+++||+||||++|++|+ ++||||+++|+++|||++|||
T Consensus 363 ~a~~~Ga~l~~~~~~~~-~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vf 439 (500)
T TIGR01238 363 HMSQTQKKIAQLTLDDS-RACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVH 439 (500)
T ss_pred HHHHcCCEEEeeccCCC-CCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEE
Confidence 99999998875432100 0123689999999974 688999999999999999998 799999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC-CcchHHHHHhchhce
Q 009919 394 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVK 452 (522)
Q Consensus 394 s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~~l~~ft~~k 452 (522)
|+|.+.++++++++++|+|+||+...+...+.+||||+|+||+| +.+|.+++++||+.|
T Consensus 440 T~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~~k 499 (500)
T TIGR01238 440 SRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQ 499 (500)
T ss_pred eCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHhhc
Confidence 99999999999999999999999766554455899999999999 799999999999876
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-87 Score=713.53 Aligned_cols=447 Identities=18% Similarity=0.253 Sum_probs=392.4
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHH-HHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQ-KVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~-~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
||++++++. +.+++++++++|++|+ +.|+++|..+|.++|++++++|++++++|++++++|+||+..+++ .|+..++
T Consensus 29 ge~l~~v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~a~-~ev~~~i 106 (521)
T PRK11903 29 GEELVRVSA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDAYYDIATANSGTTRNDSA-VDIDGGI 106 (521)
T ss_pred CCEEEEecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 689999997 7899999999999995 999999999999999999999999999999999999999999986 6999999
Q ss_pred HHHHHHHHccccccCcccccCC-ccc----ccccceEEEee-ceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCC
Q 009919 80 EKITWLLSEGEKWLKPEYRSSG-RSM----IHKKAKVEFHP-LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 153 (522)
Q Consensus 80 ~~l~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~P-~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~ 153 (522)
+.++|+++.+...........+ ... .....++.++| +|||++|+|||||+.+.++++++||++||+||+|||+.
T Consensus 107 ~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VV~KPs~~ 186 (521)
T PRK11903 107 FTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPATA 186 (521)
T ss_pred HHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHHHHHHHHHHHHHcCCeEEEEcCCc
Confidence 9999998876554321110100 000 11234678899 69999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHhcC-CCCCcEeeecCcc-hhhhhHhcCccEEEEeCCHHHHHHHHHHH--hcCCCceeeeCCCc
Q 009919 154 ASWSGCFYFRIIQAALAAVG-APENLVDVITGFA-ETGEALVSSVDKIIFVGSPGVGRMIMRNA--SKTLTPVTLELGGK 229 (522)
Q Consensus 154 ~~~~~~~l~~~~~~~l~~ag-~p~g~v~vv~g~~-~~~~~L~~~vd~V~ftGS~~~g~~v~~~a--a~~~~pv~lelgGk 229 (522)
+|.++..+.+++. ++| +|+|++++|+|++ +.++.| ..+|.|+||||+.+|+.|++.+ +++++|+++|||||
T Consensus 187 tp~~~~~l~~~~~----~ag~lP~gv~~~v~g~~~~~~~~l-~~v~~v~fTGS~~~G~~v~~~aa~~~~~~~~~lElGGk 261 (521)
T PRK11903 187 TAWLTQRMVKDVV----AAGILPAGALSVVCGSSAGLLDHL-QPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSL 261 (521)
T ss_pred ChHHHHHHHHHHH----HhCCCCcCceEEeeCCchHHHhcc-cCCCEEEEECCHHHHHHHHhhhhhhccCceeEeecccc
Confidence 9999988887765 688 9999999999865 444444 5899999999999999999965 48899999999999
Q ss_pred ceEEEcCCCC-----HHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCH
Q 009919 230 DAFIVCDDVD-----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 304 (522)
Q Consensus 230 ~p~iV~~daD-----l~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~ 304 (522)
||+||++||| ++.+++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++
T Consensus 262 np~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~ 341 (521)
T PRK11903 262 NSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSR 341 (521)
T ss_pred CceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHHHHHHHhccCCCCCCCcCccCCCCCH
Confidence 9999999999 59999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCcEeeccCCCCCC--CCCCCcccccEEEecCCC--CCcccccccccceeeeeecCCHHHHHHH
Q 009919 305 EHSEKLQNLVNDALDKGAEILARGSFGHLS--EGAVDQYFPPTVIVNVNH--TMKLMQEEAFGPIMPIMKFNTDEEVVKL 380 (522)
Q Consensus 305 ~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~--~~~~~~~~~Ptvl~~~~~--~~~i~~~E~fgPvl~v~~~~~~~eai~~ 380 (522)
.+++++.++|+.. .+|+++++||...... ...+|+|++|||+.++++ +|.+++||+||||++|++|+|+||||++
T Consensus 342 ~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~~eE~FGPvl~V~~~~~~~eai~~ 420 (521)
T PRK11903 342 AQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALAL 420 (521)
T ss_pred HHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHHhCcccCCeEEEEeeCCHHHHHHH
Confidence 9999999999964 5799999999742211 123588999999987654 4789999999999999999999999999
Q ss_pred HhcCCCCceeEEecCcHHHHHHHHHHh--ccCCeeecCCcc-------cCCCCCCCccCCCCCCCCCcc-hHHHHHhchh
Q 009919 381 ANDSRYGLGCAVFSGSQHRAREIAAQI--QCGVAAINDFAS-------NYMCQSLPFGGVKDSGFGRFA-GVEGLRACCL 450 (522)
Q Consensus 381 ~n~~~~gL~a~v~s~d~~~~~~~~~~l--~~G~v~IN~~~~-------~~~~~~~PfGG~~~SG~G~~~-g~~~l~~ft~ 450 (522)
+|+++|||++||||+|.+.+.++++++ ++|+|+||+... ....+.+||||+|.||+|+++ |.+++++||+
T Consensus 421 ~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~~l~~~t~ 500 (521)
T PRK11903 421 ARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLHGGPGRAGGGEELGGLRALAFYHR 500 (521)
T ss_pred HhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCCCCCCcCcCCcccccHHHHHHHhc
Confidence 999999999999999999999999999 999999997532 223346899999999999995 4899999999
Q ss_pred ceEEE
Q 009919 451 VKSVV 455 (522)
Q Consensus 451 ~k~v~ 455 (522)
.|+|.
T Consensus 501 ~~~~~ 505 (521)
T PRK11903 501 RSAVQ 505 (521)
T ss_pred cceee
Confidence 77764
|
|
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-87 Score=710.13 Aligned_cols=441 Identities=31% Similarity=0.456 Sum_probs=407.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcC-CHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKS-SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~-~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
|+++++++.++.+++++++++|++|++.|+++ +.++|.++|+++++.|.+++++|++++++|+||+..++. .|+..++
T Consensus 26 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ev~~~~ 104 (473)
T cd07082 26 GEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEEVANLLMWEIGKTLKDAL-KEVDRTI 104 (473)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHH-HHHHHHH
Confidence 68999999999999999999999999999998 999999999999999999999999999999999999985 5999999
Q ss_pred HHHHHHHHccccccCcccccCCcc--cccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHH
Q 009919 80 EKITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 157 (522)
Q Consensus 80 ~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~ 157 (522)
+.++++++.++++.... ...... ..+...+++++|+|||++|+|||||+.+.++.+++||++||+||+|||+.+|.+
T Consensus 105 ~~l~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL~aGN~vilKps~~~~~~ 183 (473)
T cd07082 105 DYIRDTIEELKRLDGDS-LPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLL 183 (473)
T ss_pred HHHHHHHHHHHHhcCCc-ccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHH
Confidence 99999988877663321 111110 124456899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEE
Q 009919 158 GCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 234 (522)
Q Consensus 158 ~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV 234 (522)
+..+.+++. ++|+|++++++++|++ +.++.|+. .+|.|+||||+.+|+.|++.++ ++|+++|+|||||+||
T Consensus 184 ~~~l~~~l~----~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelgg~n~~iV 257 (473)
T cd07082 184 GIPLAEAFH----DAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHP--MKRLVLELGGKDPAIV 257 (473)
T ss_pred HHHHHHHHH----HcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhC--CCcEEEEcCCCCeEEE
Confidence 988877655 6899999999999965 45888886 8999999999999999999887 8999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i 314 (522)
++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|.++++++||++++++++++.+++
T Consensus 258 ~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~ 337 (473)
T cd07082 258 LPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLI 337 (473)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEec
Q 009919 315 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 394 (522)
Q Consensus 315 ~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s 394 (522)
+++.++|+++++||.. ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 338 ~~a~~~ga~~~~gg~~------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t 411 (473)
T cd07082 338 DDAVAKGATVLNGGGR------EGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFT 411 (473)
T ss_pred HHHHHCCCEEEeCCcc------CCCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHHHHhCCCCCceEEEEe
Confidence 9999999999999973 2389999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 395 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 395 ~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
+|.+.+.++++++++|+|+||++.... ...+||||+|.||+|++||.+|+++||+.|+|+.
T Consensus 412 ~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~ 472 (473)
T cd07082 412 KDINKARKLADALEVGTVNINSKCQRG-PDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVI 472 (473)
T ss_pred CCHHHHHHHHHhCCcceEEECCCCCCC-CCCCCCCcccccccCCCChHHHHHHhhceeEEEE
Confidence 999999999999999999999976553 3458999999999999999999999999999864
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-87 Score=697.37 Aligned_cols=402 Identities=30% Similarity=0.470 Sum_probs=370.6
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEE
Q 009919 41 LRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120 (522)
Q Consensus 41 L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 120 (522)
|++++++|++++++|++++++|+||+..|+. .|+..+++.++++++..+.+.... ... ...+...+++++|+|||+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~-~~~--~~~~~~~~~~~~P~Gvv~ 76 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEI-IQS--DRPGENILLFKRALGVTT 76 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cCC--CCCCceeEEEEecccEEE
Confidence 5789999999999999999999999999996 699999999999988766543211 111 112345688999999999
Q ss_pred EEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--Ccc
Q 009919 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVD 197 (522)
Q Consensus 121 vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd 197 (522)
+|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|++++|+|++ +.+..|++ .+|
T Consensus 77 ~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~----~aglP~gv~~~v~g~~~~~~~~l~~~~~v~ 152 (409)
T PRK10090 77 GILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVD----EIGLPKGVFNLVLGRGETVGQELAGNPKVA 152 (409)
T ss_pred EECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHH----HcCCCcccEEEEeCCChhHHHHHhcCCCcC
Confidence 9999999999999999999999999999999999999998887765 7899999999999964 66888887 899
Q ss_pred EEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHH
Q 009919 198 KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVS 277 (522)
Q Consensus 198 ~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~ 277 (522)
.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|++
T Consensus 153 ~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~ 232 (409)
T PRK10090 153 MVSMTGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVN 232 (409)
T ss_pred EEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCCCC-CCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcc
Q 009919 278 QVAKIVKSVSAGPPLAG-KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 356 (522)
Q Consensus 278 ~L~~~~~~~~~g~~~~~-~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i 356 (522)
+|+++++++++|+|.++ ++++|||+++.+++++.++|++++++|+++++||... ...|+|++|||+++++++|++
T Consensus 233 ~l~~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i 308 (409)
T PRK10090 233 RLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAV----EGKGYYYPPTLLLDVRQEMSI 308 (409)
T ss_pred HHHHHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCeEEecEEEeCCCCCCHH
Confidence 99999999999999987 8999999999999999999999999999999999742 235789999999999999999
Q ss_pred cccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCC
Q 009919 357 MQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGF 436 (522)
Q Consensus 357 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~ 436 (522)
++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++..+.. ..||||+|+||+
T Consensus 309 ~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~--~~pfGG~k~SG~ 386 (409)
T PRK10090 309 MHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAM--QGFHAGWRKSGI 386 (409)
T ss_pred HhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCC--CCCcCCcccccC
Confidence 999999999999999999999999999999999999999999999999999999999999766543 479999999999
Q ss_pred CCcchHHHHHhchhceEEEE
Q 009919 437 GRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 437 G~~~g~~~l~~ft~~k~v~~ 456 (522)
|++||.+||++||+.|+++.
T Consensus 387 G~~~g~~gl~~f~~~k~v~~ 406 (409)
T PRK10090 387 GGADGKHGLHEYLQTQVVYL 406 (409)
T ss_pred CccchHHHHHHhcceEEEEE
Confidence 99999999999999999865
|
|
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-86 Score=730.05 Aligned_cols=447 Identities=23% Similarity=0.311 Sum_probs=395.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHH-HHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a-~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
|+++++++.++ +|+++++++|++| ++.|++++..+|.++|++++++|+++.++|++ ++.|+||+..++. .|+..++
T Consensus 29 g~~i~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-l~~e~GK~~~~a~-~ev~~~~ 105 (675)
T PRK11563 29 GEPVARVSSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKEELYA-LSAQTGATRRDSW-IDIEGGI 105 (675)
T ss_pred CCEEEEEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH-HHHHhCCCHHHHH-HHHHHHH
Confidence 68999999987 6999999999998 79999999999999999999999999999998 5899999999986 5999999
Q ss_pred HHHHHHHHccccccC-------cccccCCcccccccceEEEeec-eEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecC
Q 009919 80 EKITWLLSEGEKWLK-------PEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 151 (522)
Q Consensus 80 ~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~P~-GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 151 (522)
+.+++++..+++.+. .+..+... ......++.++|+ |||++|+|||||+.+.++++++||++||+||+|||
T Consensus 106 ~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~p~~GVv~~I~PwNfP~~~~~~~i~pALaaGN~VV~KPs 184 (675)
T PRK11563 106 GTLFTYASKGRRELPNDTVLVEGEVEPLSK-GGTFAGRHILTPLEGVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPA 184 (675)
T ss_pred HHHHHHHHHHhhhccccccccCCccccccC-CCcccceEEEeecCceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECC
Confidence 999999887755432 11111100 0012257889997 99999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHhcC-CCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHH--HhcCCCceeeeC
Q 009919 152 ENASWSGCFYFRIIQAALAAVG-APENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRN--ASKTLTPVTLEL 226 (522)
Q Consensus 152 ~~~~~~~~~l~~~~~~~l~~ag-~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~--aa~~~~pv~lel 226 (522)
+.+|+++..+.+++. ++| +|+|++|+|+|+.. +.+.. .+|.|.||||+++|+.|++. ++++++|+++||
T Consensus 185 e~tp~~a~~l~~~~~----eaG~~P~gv~~vv~g~~~--~~~~~~~~i~~v~FTGS~~~G~~i~~~~~a~~~~~~~~lEL 258 (675)
T PRK11563 185 TATAYLTEAVVRLIV----ESGLLPEGALQLICGSAG--DLLDHLDGQDVVTFTGSAATAQKLRAHPNVVANSVPFTAEA 258 (675)
T ss_pred CCCcHHHHHHHHHHH----HcCCCCCCcEEEeeCCHH--HHhhcCCCCCEEEEECcHHHHHHHHhhhhhhhCCceEEEec
Confidence 999999988888765 789 99999999998632 22222 79999999999999999985 558999999999
Q ss_pred CCcceEEEcCCCC-----HHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCccccc
Q 009919 227 GGKDAFIVCDDVD-----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 301 (522)
Q Consensus 227 gGk~p~iV~~daD-----l~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~l 301 (522)
|||||+||++||| ++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||
T Consensus 259 GGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~d~~t~~GPl 338 (675)
T PRK11563 259 DSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGAL 338 (675)
T ss_pred CCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHHHHHHHHhcCccCCCCCCCCcccCC
Confidence 9999999999995 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCcEeeccCCCC---CCCCCCCcccccEEEecCCC--CCcccccccccceeeeeecCCHHH
Q 009919 302 CLLEHSEKLQNLVNDALDKGAEILARGSFGH---LSEGAVDQYFPPTVIVNVNH--TMKLMQEEAFGPIMPIMKFNTDEE 376 (522)
Q Consensus 302 i~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~---~~~~~~~~~~~Ptvl~~~~~--~~~i~~~E~fgPvl~v~~~~~~~e 376 (522)
+++.+++++.++|++|+++ +++++||.... .+....|+|++|||+.++++ ++.+++||+||||++|++|+|+||
T Consensus 339 i~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~i~~eEiFGPVl~V~~~~~~~e 417 (675)
T PRK11563 339 ASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDE 417 (675)
T ss_pred cCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhhHhhccccCCceEEEecCCHHH
Confidence 9999999999999999998 99999996321 11123589999999999998 579999999999999999999999
Q ss_pred HHHHHhcCCCCceeEEecCcHHHHHHHHHHhc--cCCeeecCCcc-------cCCCCCCCccCCCCCCCCCc-chHHHHH
Q 009919 377 VVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFAS-------NYMCQSLPFGGVKDSGFGRF-AGVEGLR 446 (522)
Q Consensus 377 ai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~--~G~v~IN~~~~-------~~~~~~~PfGG~~~SG~G~~-~g~~~l~ 446 (522)
||+++|+++|||++||||+|.+.+.+++++++ +|.|+||+.+. ....+.+||||+|.||+|++ +|.++++
T Consensus 418 ai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~~g~~~~~ 497 (675)
T PRK11563 418 AIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVK 497 (675)
T ss_pred HHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcCCCcCCCCCCCCCccccchhHHH
Confidence 99999999999999999999999999999997 99999998532 11225689999999999999 5699999
Q ss_pred hchhceEEEEcc
Q 009919 447 ACCLVKSVVEDR 458 (522)
Q Consensus 447 ~ft~~k~v~~~~ 458 (522)
+||+.|+|..-|
T Consensus 498 ~f~~~k~~~~~~ 509 (675)
T PRK11563 498 HYMQRTAVQGSP 509 (675)
T ss_pred HhheeeeeecCH
Confidence 999999996544
|
|
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-85 Score=688.84 Aligned_cols=423 Identities=32% Similarity=0.498 Sum_probs=386.8
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHccccccCcc
Q 009919 17 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE 96 (522)
Q Consensus 17 ~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~ 96 (522)
.++++|++||..|+++|..+|.++|++++++|++++++|+++++.|+||+..++...|+..+++.++++++.+.++..+.
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~ 81 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR 81 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 37899999999999999999999999999999999999999999999999877766799999999999988877665433
Q ss_pred cccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCC
Q 009919 97 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 176 (522)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag~p~ 176 (522)
.........+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++.+++.+ |+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-----~~P~ 156 (426)
T cd07087 82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-----YFDP 156 (426)
T ss_pred ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-----hCCC
Confidence 22211111234578899999999999999999999999999999999999999999999999888887763 5999
Q ss_pred CcEeeecCcchhhhhHhc-CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHHHHHHHcC
Q 009919 177 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS 255 (522)
Q Consensus 177 g~v~vv~g~~~~~~~L~~-~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~~~~~~n~ 255 (522)
|++++++|+.+.+..|+. .+|.|.||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++|.|+
T Consensus 157 gv~~vv~g~~~~~~~l~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~ 236 (426)
T cd07087 157 EAVAVVEGGVEVATALLAEPFDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNA 236 (426)
T ss_pred CEEEEEeCCchHHHHHHhCCCCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhcc
Confidence 999999997777888888 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCCCCCCC
Q 009919 256 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 335 (522)
Q Consensus 256 Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~ 335 (522)
||.|+++++||||++++|+|+++|++.+++++.|+| ++++++||++++.+++++.++++++ ++++||..
T Consensus 237 GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~----- 305 (426)
T cd07087 237 GQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQV----- 305 (426)
T ss_pred CCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCcc-----
Confidence 999999999999999999999999999999975555 5788999999999999999999764 79999863
Q ss_pred CCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhccCCeeec
Q 009919 336 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 415 (522)
Q Consensus 336 ~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~~G~v~IN 415 (522)
+.+|.|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||
T Consensus 306 ~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN 385 (426)
T cd07087 306 DKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVN 385 (426)
T ss_pred CCCCCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEEC
Confidence 23588999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 416 DFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 416 ~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
++......+.+||||+|.||+|+++|.+|+++||+.|+++
T Consensus 386 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 386 DVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred CcccccCCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence 9765554567999999999999999999999999999975
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-85 Score=735.93 Aligned_cols=444 Identities=22% Similarity=0.393 Sum_probs=408.3
Q ss_pred ceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHH
Q 009919 2 KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK 81 (522)
Q Consensus 2 ~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~ 81 (522)
+++++++.++.++++++++.|++|++.|+.+|.++|.++|++++++|++++++|+.+++.|+||+..++. .|+..+++.
T Consensus 574 ~~vg~v~~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~~~eL~~l~~~E~GK~~~~a~-~EV~eaid~ 652 (1038)
T PRK11904 574 RVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAELIALCVREAGKTLQDAI-AEVREAVDF 652 (1038)
T ss_pred eeEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999999999999999999984 799999999
Q ss_pred HHHHHHccccccC-cccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 82 ITWLLSEGEKWLK-PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 82 l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
++|++..+.++.. +...+.+ .+..++++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..
T Consensus 653 lr~ya~~a~~~~~~~~~l~g~---~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~ 729 (1038)
T PRK11904 653 CRYYAAQARRLFGAPEKLPGP---TGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAE 729 (1038)
T ss_pred HHHHHHHHHHhhCCCcccCCC---CCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHH
Confidence 9999998877652 2222222 35678899999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcC---CCceeeeCCCcceEEE
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT---LTPVTLELGGKDAFIV 234 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~---~~pv~lelgGk~p~iV 234 (522)
+.+++. ++|+|+|++|+|+|++ +.++.|+. ++|.|+||||+.+|+.|.+.++++ ++|+++|+|||||+||
T Consensus 730 l~~ll~----eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV 805 (1038)
T PRK11904 730 AVKLLH----EAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIV 805 (1038)
T ss_pred HHHHHH----HhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEE
Confidence 887655 7899999999999976 47888987 899999999999999999998865 7899999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i 314 (522)
++|||++.|++.+++|+|.|+||.|+|+++||||++++|+|+++|+++++++++|+|.+.++++||+|++.+++++.++|
T Consensus 806 ~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I 885 (1038)
T PRK11904 806 DSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHI 885 (1038)
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecC--CHHHHHHHHhcCCCCceeEE
Q 009919 315 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVVKLANDSRYGLGCAV 392 (522)
Q Consensus 315 ~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gL~a~v 392 (522)
+++.+ |+++++||...+ ....|+|++|||+.. +++.+++||+||||++|++|+ ++||||+++|+++|||+++|
T Consensus 886 ~~a~~-ga~vl~gg~~~~--~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~I 960 (1038)
T PRK11904 886 ERMKR-EARLLAQLPLPA--GTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGI 960 (1038)
T ss_pred HHHHc-CCEEEeCCCCCC--CCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEE
Confidence 99875 899999987421 113589999999863 578889999999999999997 69999999999999999999
Q ss_pred ecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC-CcchHHHHHhchhceEEEEcc
Q 009919 393 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 393 ~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~~l~~ft~~k~v~~~~ 458 (522)
||+|.+.+++++.++++|+|+||+..+......+||||+|.||+| +.+|+++|++|++.|+|..+.
T Consensus 961 fS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~~ktv~~~~ 1027 (1038)
T PRK11904 961 HSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATEKTVTVNT 1027 (1038)
T ss_pred EcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhceEEEEEcc
Confidence 999999999999999999999999877665566899999999999 678999999999999998753
|
|
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-83 Score=675.14 Aligned_cols=428 Identities=20% Similarity=0.259 Sum_probs=374.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHh--hcCCHHHH----HHHHHHHHHHHHHh--HHHHHHHHHHhcCCChhhhhh
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVW--AKSSFKQR----RQFLRILLKYIIEH--QELICEISSRDTGKTMVDASL 72 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w--~~~~~~~R----~~~L~~l~~~l~~~--~~~l~~~~~~e~Gk~~~ea~~ 72 (522)
|+++++++.++.+|+++++++|++||+.| ..++..+| .++|+++++.|.++ .++|++++++|+||++.++.
T Consensus 22 ~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~~~~~~la~~~~~e~GK~~~~a~- 100 (489)
T cd07126 22 GDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQAL- 100 (489)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcCCCHHHHHHHHHHHcCCCHHHHH-
Confidence 68999999999999999999999999998 55778999 89999999999998 59999999999999999985
Q ss_pred hHHHHHHHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCC
Q 009919 73 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 152 (522)
Q Consensus 73 ~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 152 (522)
.|+..+++.++++++...+...... ..+....+..++++++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 101 ~Ev~~~~~~~~~~a~~~~~~~g~~~-~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPSe 179 (489)
T cd07126 101 GEVVVTRKFLENFAGDQVRFLARSF-NVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDS 179 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcee-ccCCCCCCceeEEEEecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 7999999999999987765433221 001111245678999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcc
Q 009919 153 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 230 (522)
Q Consensus 153 ~~~~~~~~l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~ 230 (522)
.+|.++.++.+++. ++|+|+|++|+|+|+++.+..++. ++|+|+||||+++|+.|+..++ +++.+|+||||
T Consensus 180 ~tp~~~~~l~~~~~----~aGlP~gv~~vv~G~~~~~~~l~~~~~v~~V~FTGS~~vGr~i~~~~g---~k~~lElgg~~ 252 (489)
T cd07126 180 KVSVVMEQFLRLLH----LCGMPATDVDLIHSDGPTMNKILLEANPRMTLFTGSSKVAERLALELH---GKVKLEDAGFD 252 (489)
T ss_pred CCCHHHHHHHHHHH----HhCcCcCcEEEEeCCchhHHHHhcCCCCCEEEEECCHHHHHHHHHHhC---CCEEeecCCCC
Confidence 99999988887765 789999999999997654555664 9999999999999999998877 67999999999
Q ss_pred eEEEcCCC-CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhh-HHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHH
Q 009919 231 AFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 308 (522)
Q Consensus 231 p~iV~~da-Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i-~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~ 308 (522)
|+||++|| |++.|++.+++++|.|+||.|++++|||||+++ +|+|+++|++.++++++|+ +++||+++.. .+
T Consensus 253 ~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g~-----~~~Gpli~~~-~~ 326 (489)
T cd07126 253 WKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED-----LTIGPVLTWT-TE 326 (489)
T ss_pred ceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccCC-----CcCCCCcCHH-HH
Confidence 99999999 999999999999999999999999999999995 6999999999999998764 4899999998 89
Q ss_pred HHHHHHHHHHH-cCCcEeeccCCCCCCCCCCC-cccccEEEec------CCCCCcccccccccceeeeeecCC--HHHHH
Q 009919 309 KLQNLVNDALD-KGAEILARGSFGHLSEGAVD-QYFPPTVIVN------VNHTMKLMQEEAFGPIMPIMKFNT--DEEVV 378 (522)
Q Consensus 309 ~~~~~i~~a~~-~Ga~v~~gG~~~~~~~~~~~-~~~~Ptvl~~------~~~~~~i~~~E~fgPvl~v~~~~~--~~eai 378 (522)
++.++++++++ +|+++++||...+......+ .|++|||+.. ++++|.+++||+||||++|++|+| +||||
T Consensus 327 ~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~~~deai 406 (489)
T cd07126 327 RILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVL 406 (489)
T ss_pred HHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCEEEEEEECCCCHHHHH
Confidence 99999999997 89999999974211000123 3899999842 578999999999999999999999 99999
Q ss_pred HHHhcCCCCceeEEecCcHHHHHHHHHHhccCC--eeecCCcccCCCC--CCCccCCCCCCCCCcchHH
Q 009919 379 KLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV--AAINDFASNYMCQ--SLPFGGVKDSGFGRFAGVE 443 (522)
Q Consensus 379 ~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~~G~--v~IN~~~~~~~~~--~~PfGG~~~SG~G~~~g~~ 443 (522)
+++|+++|||++||||+|.++++++++++++|+ |+||+..+..... ..||||+|+||+|+.....
T Consensus 407 ~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g~~~~~~ 475 (489)
T cd07126 407 EALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGTPEAIR 475 (489)
T ss_pred HHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCCCHhHHH
Confidence 999999999999999999999999999999999 6699876654321 2899999999999875443
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-83 Score=724.40 Aligned_cols=430 Identities=23% Similarity=0.381 Sum_probs=397.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
++++++++.++.++++.+++.|++|+..|+.+|.++|.++|++++++|+++.++|+.+++.|+||+..++. .|+..+++
T Consensus 670 ~~~vg~v~~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt~~~A~-~EV~eaid 748 (1318)
T PRK11809 670 RDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKTFSNAI-AEVREAVD 748 (1318)
T ss_pred CeeEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999984 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|++.+++..+ ....++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 749 flryyA~~a~~~~---------------~~~~~~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~~ 813 (1318)
T PRK11809 749 FLRYYAGQVRDDF---------------DNDTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQ 813 (1318)
T ss_pred HHHHHHHHHHHhc---------------CCceeecccEEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHHH
Confidence 9999998765421 1246889999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCC------CceeeeCCCcce
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL------TPVTLELGGKDA 231 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~------~pv~lelgGk~p 231 (522)
+++++. ++|+|+|+||+|+|++ +.++.|+. .|+.|+||||+++|+.|.+.+++++ +|+++|+|||||
T Consensus 814 lv~ll~----eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~l~~~g~~~pliaElGGkNa 889 (1318)
T PRK11809 814 AVRILL----EAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAETGGQNA 889 (1318)
T ss_pred HHHHHH----HhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhhhcccccCceeEEEecCCccc
Confidence 888765 7899999999999976 56899987 9999999999999999999998876 899999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHH
Q 009919 232 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 311 (522)
Q Consensus 232 ~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~ 311 (522)
+||++|||++.+++.+++|+|.|+||.|+++++||||++++|+|+++|+++++++++|+|.+.++++||+|++.+++++.
T Consensus 890 ~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~~tdvGPvId~~a~~~i~ 969 (1318)
T PRK11809 890 MIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIE 969 (1318)
T ss_pred eEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcccccCCcCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecC--CHHHHHHHHhcCCCCce
Q 009919 312 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVVKLANDSRYGLG 389 (522)
Q Consensus 312 ~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gL~ 389 (522)
++|+++.++|++++.||..... ....|+|++|||+.. +++.++++|+||||++|++|+ ++||+|+++|+++|||+
T Consensus 970 ~~I~~a~~~G~~v~~g~~~~~~-~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt 1046 (1318)
T PRK11809 970 RHIQAMRAKGRPVFQAARENSE-DWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRNQLDELIEQINASGYGLT 1046 (1318)
T ss_pred HHHHHHHHcCCEEEecCCCCCC-CCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCCCHHHHHHHHhcCCCCce
Confidence 9999999999999888753210 114599999999974 568889999999999999996 79999999999999999
Q ss_pred eEEecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC-CcchHHHHHhchhceE
Q 009919 390 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKS 453 (522)
Q Consensus 390 a~v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~~l~~ft~~k~ 453 (522)
++|||+|.+.++++++++++|+|+||+..+......+||||+|.||+| +.+|++++..|+..+.
T Consensus 1047 ~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809 1047 LGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred EEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHhccCC
Confidence 999999999999999999999999998766554456899999999999 5799999999998874
|
|
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-82 Score=719.50 Aligned_cols=432 Identities=22% Similarity=0.374 Sum_probs=400.0
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.++++++++.|++|++.|+.+|.++|.++|++++++|++++++|+.+++.|+||+..++. .|+..+++
T Consensus 578 ~~~vg~v~~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~~ea~-~Ev~eaid 656 (1208)
T PRK11905 578 DDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTLANAI-AEVREAVD 656 (1208)
T ss_pred CceEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999984 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|++..++++.. ...++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 657 ~lr~ya~~a~~~~~---------------~~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~~ 721 (1208)
T PRK11905 657 FLRYYAAQARRLLN---------------GPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAAR 721 (1208)
T ss_pred HHHHHHHHHHHhcC---------------CceecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHHH
Confidence 99999987655321 135679999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCC---CceeeeCCCcceEEE
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL---TPVTLELGGKDAFIV 234 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~---~pv~lelgGk~p~iV 234 (522)
+.+++. ++|+|+|++|+|+|++ +.++.|+. +++.|+||||+.+|+.|.+.+++++ +|+++|+|||||+||
T Consensus 722 l~~ll~----eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~~~~~pli~ElGGkN~~IV 797 (1208)
T PRK11905 722 AVRLLH----EAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQNAMIV 797 (1208)
T ss_pred HHHHHH----HcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhcCCCCeEEEecCCcCeEEE
Confidence 887765 7999999999999976 57899987 9999999999999999999998764 899999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i 314 (522)
++|||++.|++.+++|+|.|+||.|+|+++||||++++|+|+++|+++++++++|+|.+.++++||+|++.+++++.++|
T Consensus 798 ~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~t~~GPvId~~a~~~i~~~I 877 (1208)
T PRK11905 798 DSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHI 877 (1208)
T ss_pred cCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhccCCccCccCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecC--CHHHHHHHHhcCCCCceeEE
Q 009919 315 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVVKLANDSRYGLGCAV 392 (522)
Q Consensus 315 ~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gL~a~v 392 (522)
+++.++|+.++.|+... ....|+|++|||+. + +++.++++|+||||++|++|+ ++||+|+++|+++|||+++|
T Consensus 878 ~~a~~~G~~l~~g~~~~---~~~~G~fv~PTVl~-~-~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~iN~t~yGLt~~I 952 (1208)
T PRK11905 878 EAMRAAGRLVHQLPLPA---ETEKGTFVAPTLIE-I-DSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGL 952 (1208)
T ss_pred HHHHHCCCEEEEccCCC---CCCCCeEEeeEEEe-c-CChHHhcCCccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEE
Confidence 99999998887765411 11469999999996 3 578899999999999999997 69999999999999999999
Q ss_pred ecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC-CcchHHHHHhchhceEEEEc
Q 009919 393 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 393 ~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~~l~~ft~~k~v~~~ 457 (522)
||+|.+.++++++++++|+|+||+..+....+.+||||+|.||+| +.+|+++++.|++.|++...
T Consensus 953 ~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~v~~~ 1018 (1208)
T PRK11905 953 HSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAPTPIP 1018 (1208)
T ss_pred EcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcceeecc
Confidence 999999999999999999999999877665566899999999999 58999999999999998744
|
|
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-82 Score=665.30 Aligned_cols=422 Identities=21% Similarity=0.275 Sum_probs=376.2
Q ss_pred HHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHcccc--c
Q 009919 15 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK--W 92 (522)
Q Consensus 15 v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~--~ 92 (522)
++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+||+..++. .|+..+++.++++++.+++ |
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~-~ev~~~~~~l~~~a~~~~~~~~ 79 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQ-GELGRTTGQLRLFADLVREGSW 79 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHH-HHHHHHHHHHHHHHHHHHhcCC
Confidence 468899999999999999999999999999999999999999999999999998875 7999999999999887653 2
Q ss_pred cCcccc---cCCcccccccceEEEeeceEEEEEccCchhhhh--hhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHH
Q 009919 93 LKPEYR---SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN--IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 167 (522)
Q Consensus 93 ~~~~~~---~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~--~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~ 167 (522)
...... +......+...+++++|+|||++|+|||||+.+ .++++++||++||+||+|||+.+|.++.++.+++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~ 159 (454)
T cd07129 80 LDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRA 159 (454)
T ss_pred ccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHH
Confidence 211100 000001123457899999999999999999987 458999999999999999999999999999999999
Q ss_pred HHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhc--CCCceeeeCCCcceEEEcCCC---C
Q 009919 168 ALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK--TLTPVTLELGGKDAFIVCDDV---D 239 (522)
Q Consensus 168 ~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~--~~~pv~lelgGk~p~iV~~da---D 239 (522)
+|.++|+|+|+||+|+|++ +.+++|++ .+|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|+ |
T Consensus 160 ~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~d 239 (454)
T cd07129 160 ALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAER 239 (454)
T ss_pred HHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHH
Confidence 9999999999999999965 77889987 89999999999999999999998 699999999999999999999 8
Q ss_pred HHHHHHHHHHHHHHcCCCCcccCCeeEEchh-hHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 240 VPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 240 l~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~-i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
++.|++.+++|+|.|+||.|++++|||||++ ++|+|+++|+++++++++| |++++.+.++..+.|++++
T Consensus 240 l~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g----------~~~~~~~~~~~~~~i~~a~ 309 (454)
T cd07129 240 GEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQ----------TMLTPGIAEAYRQGVEALA 309 (454)
T ss_pred HHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCCC----------CCcChHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 9999999999999998754 5667777788888888888
Q ss_pred Hc-CCcEeeccCCCCCCCCCCCcccccEEEecCC---CCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEec
Q 009919 319 DK-GAEILARGSFGHLSEGAVDQYFPPTVIVNVN---HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 394 (522)
Q Consensus 319 ~~-Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~---~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s 394 (522)
++ |+++++||.. ..+++|++|||+.+.+ ++|.+++||+||||++|++|+|.||||+++|+++|||++||||
T Consensus 310 ~~~ga~~l~gg~~-----~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft 384 (454)
T cd07129 310 AAPGVRVLAGGAA-----AEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHG 384 (454)
T ss_pred hcCCcEEEeCCCc-----CCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEc
Confidence 88 9999999973 2468999999998655 6899999999999999999999999999999999999999999
Q ss_pred Cc--HHHHHHHHHHh--ccCCeeecCCcccCCC-CCCCccC-CCCCCCCCc--chHHHHHhchhce
Q 009919 395 GS--QHRAREIAAQI--QCGVAAINDFASNYMC-QSLPFGG-VKDSGFGRF--AGVEGLRACCLVK 452 (522)
Q Consensus 395 ~d--~~~~~~~~~~l--~~G~v~IN~~~~~~~~-~~~PfGG-~~~SG~G~~--~g~~~l~~ft~~k 452 (522)
+| .+.++++++++ ++|+|+||++...... +.+|||| +|.||+|++ +|++++++||++.
T Consensus 385 ~d~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~~ 450 (454)
T cd07129 385 EEDDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRPV 450 (454)
T ss_pred cCchHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhcccc
Confidence 99 78999999999 6999999987554322 4689999 999999999 8999999999763
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-80 Score=651.92 Aligned_cols=428 Identities=36% Similarity=0.582 Sum_probs=397.4
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHccccccCc
Q 009919 16 DERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP 95 (522)
Q Consensus 16 ~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~ 95 (522)
+++++.|++|+..|++++.++|.++|+++++.|.++.++|+++++.|+||+..++ ..|+..+++.++++++..+++..+
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~-~~ei~~~i~~l~~~~~~~~~~~~~ 79 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEA-LGEVARAADTFRYYAGLARRLHGE 79 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3678999999999999999999999999999999999999999999999988766 579999999999998888777654
Q ss_pred ccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCC
Q 009919 96 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 175 (522)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag~p 175 (522)
.... ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++. ++|+|
T Consensus 80 ~~~~---~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~----~ag~p 152 (432)
T cd07078 80 VIPS---PDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLA----EAGLP 152 (432)
T ss_pred cccc---cCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH----HcCCC
Confidence 3311 1235677899999999999999999999999999999999999999999999999998888765 68999
Q ss_pred CCcEeeecCcch-hhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHHHHHH
Q 009919 176 ENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAAL 252 (522)
Q Consensus 176 ~g~v~vv~g~~~-~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~~~~~ 252 (522)
++++++++|+.+ .+..|+. .+|.|.||||..+++.|.+.++++++|+++|+||+||+||++|+|++.|++.|++++|
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~ 232 (432)
T cd07078 153 PGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAF 232 (432)
T ss_pred cCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHH
Confidence 999999998764 6788887 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCCCC
Q 009919 253 QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH 332 (522)
Q Consensus 253 ~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~ 332 (522)
.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++++.++|+++++||....
T Consensus 233 ~~~Gq~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~ 312 (432)
T cd07078 233 GNAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLE 312 (432)
T ss_pred hccCCCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhccCCe
Q 009919 333 LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 412 (522)
Q Consensus 333 ~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~~G~v 412 (522)
. ..|.|++|||+.+++++++++++|+||||++|++|+++||||+++|+.++||++||||+|.+.+++++.++++|.|
T Consensus 313 ~---~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v 389 (432)
T cd07078 313 G---GKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTV 389 (432)
T ss_pred C---CCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceE
Confidence 1 1589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 413 AINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 413 ~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
+||++..+ ..+.+||||.|.||+|++||++|+++||+.|+|.
T Consensus 390 ~iN~~~~~-~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 390 WINDYSVG-AEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred EECCCCCC-CCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 99998877 4677999999999999999999999999999975
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-79 Score=643.60 Aligned_cols=421 Identities=18% Similarity=0.209 Sum_probs=368.1
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHcccccc-C
Q 009919 16 DERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWL-K 94 (522)
Q Consensus 16 ~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~-~ 94 (522)
+++++.|++|+..|+++|.++|.++|+++++.|++++++|++++++|+||+. ++. .|+..+++.+++++..+.... .
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~-~ev~~~i~~~~~~~~~~~~~~~~ 79 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFA-ENICGDQVQLRARAFVIYSYRIP 79 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhh-hhhcchHHHHHHHHHHHHhcccc
Confidence 5789999999999999999999999999999999999999999999999999 553 699999999999887765431 1
Q ss_pred cccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcCC
Q 009919 95 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 174 (522)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag~ 174 (522)
...............+++++|+|||++|+|||||+...+.++++||++||+||+|||+.+|.++..+.+++. ++|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~----~ag~ 155 (442)
T cd07084 80 HEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLH----YAGL 155 (442)
T ss_pred ccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHH----HhCC
Confidence 110000000012456889999999999999999999999999999999999999999999999988888766 6788
Q ss_pred -CCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC-CHHHHHHHHHHH
Q 009919 175 -PENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV-DVPHVAQIAVRA 250 (522)
Q Consensus 175 -p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da-Dl~~aa~~i~~~ 250 (522)
|++++++|+|+.+.+..|+. ++|.|+||||+++|+.|++.+++ +|+++|+|||||+||++|| |++.+++.++++
T Consensus 156 ~P~g~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~ 233 (442)
T cd07084 156 LPPEDVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQD 233 (442)
T ss_pred CCccceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEeccCcCcEEECCChhhHHHHHHHHHHH
Confidence 99999999998778888887 89999999999999999998875 8999999999999999999 699999999999
Q ss_pred HHHcCCCCcccCCeeEEchh-hHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc-CCcEeecc
Q 009919 251 ALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK-GAEILARG 328 (522)
Q Consensus 251 ~~~n~Gq~C~a~~~v~V~~~-i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~-Ga~v~~gG 328 (522)
+|.|+||.|+++++||||++ ++|+|+++|+++++++++| ++.+||++++. +.++++++.++ |+++++||
T Consensus 234 ~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~~----~~~~i~~a~~~gga~~~~gg 304 (442)
T cd07084 234 MTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTFT----TLAMIAHMENLLGSVLLFSG 304 (442)
T ss_pred HhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhHH----HHHHHHHHHhcCCcEEEeCC
Confidence 99999999999999999999 9999999999999999988 67899997765 44556666667 58999999
Q ss_pred CCCCCC--CCCCCcccccEEEecCCCCC---cccccccccceeeeeecCC--HHHHHHHHhcCCCCceeEEecCcHHHHH
Q 009919 329 SFGHLS--EGAVDQYFPPTVIVNVNHTM---KLMQEEAFGPIMPIMKFNT--DEEVVKLANDSRYGLGCAVFSGSQHRAR 401 (522)
Q Consensus 329 ~~~~~~--~~~~~~~~~Ptvl~~~~~~~---~i~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gL~a~v~s~d~~~~~ 401 (522)
...... ....|+|++|||+.+++++| ++++||+||||++|++|+| ++|||+++|+++|||++||||+|.+.++
T Consensus 305 ~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~ 384 (442)
T cd07084 305 KELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQ 384 (442)
T ss_pred cccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHH
Confidence 743210 01258999999999999997 9999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHh-ccCCeeecCCcccCCCCCCCccC-CCCCCCCCcc-hHHHHHhchhceE
Q 009919 402 EIAAQI-QCGVAAINDFASNYMCQSLPFGG-VKDSGFGRFA-GVEGLRACCLVKS 453 (522)
Q Consensus 402 ~~~~~l-~~G~v~IN~~~~~~~~~~~PfGG-~~~SG~G~~~-g~~~l~~ft~~k~ 453 (522)
++++++ ++|+|+||+.++....+..|||| .|.||+|+.. |.+++++||+...
T Consensus 385 ~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~ 439 (442)
T cd07084 385 ELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHA 439 (442)
T ss_pred HHHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeee
Confidence 999999 99999999874444445577777 7899999985 9999999997654
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-78 Score=642.54 Aligned_cols=439 Identities=18% Similarity=0.227 Sum_probs=374.7
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh-h---HHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL-G---EIM 76 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~-~---Ei~ 76 (522)
|+++++++.++. ++++++|++|++.|+.++..+|.++|++++++|.++.++|++++++|+||+..++.. + ++.
T Consensus 75 ~~~~~~~~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~gkp~~~~ 151 (551)
T TIGR02288 75 VELGVTYPQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAGGPHAQD 151 (551)
T ss_pred CCEEEEEcCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhccChHHHH
Confidence 678999999985 899999999999999999999999999999999999999999999999999987731 2 667
Q ss_pred HHHHHHHHHHHccccccC------cccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEec
Q 009919 77 TTCEKITWLLSEGEKWLK------PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 150 (522)
Q Consensus 77 ~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 150 (522)
..++.++|++....++.. +...... .....++.++|+|||++|+|||||+++.++++++||++||+||+||
T Consensus 152 r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVlKP 228 (551)
T TIGR02288 152 RGLEAVAYAYREMSRIPETAVWEKPQGKNDP---LKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKP 228 (551)
T ss_pred HHHHHHHHHHHHHHhccCcccccccCCCCCc---ccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEEEC
Confidence 778889888876554322 2111111 1112346889999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHHHHhcCCCCCcEeeecCc-c-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeC
Q 009919 151 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 226 (522)
Q Consensus 151 s~~~~~~~~~l~~~~~~~l~~ag~p~g~v~vv~g~-~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lel 226 (522)
|+.+|+++.++.+++.++|.++|+|+|+||+|+|+ + +.++.|+. .++.|.||||+.+|+.|++.++ .+++++||
T Consensus 229 s~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~~~v~lEl 306 (551)
T TIGR02288 229 HPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--QAQVYTEK 306 (551)
T ss_pred CcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--cCcEEeec
Confidence 99999999888888888899999999999999985 3 67888987 8999999999999999999877 48999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchh---------hHHHHHHHHHHHHHhccCCCCCCCCCc
Q 009919 227 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD---------IYALFVSQVAKIVKSVSAGPPLAGKYD 297 (522)
Q Consensus 227 gGk~p~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~---------i~d~f~~~L~~~~~~~~~g~~~~~~~~ 297 (522)
|||||+||++|||++.+++.+++|+|.|+||.|++++|||||++ ++|+|+++|+++++++ +|+|.+++++
T Consensus 307 GGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~~~~ 385 (551)
T TIGR02288 307 AGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARATAV 385 (551)
T ss_pred CCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCccccccc
Confidence 99999999999999999999999999999999999999999999 7999999999999999 8999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHH
Q 009919 298 MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEV 377 (522)
Q Consensus 298 ~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 377 (522)
+|||+++++++++ +++++.| ++++||.....+..+.++|++|||+....++|.+++||+||||++|++|+|.|||
T Consensus 386 ~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~deA 460 (551)
T TIGR02288 386 LGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGAHA 460 (551)
T ss_pred ccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHHHH
Confidence 9999999999996 4556678 6777776432221123468999999533359999999999999999999999999
Q ss_pred HHHHhcC--CCC-ceeEEecCcHHHHHHHHHHh--ccCCeeecCCcccCCCCCCCccCCCCCCCCC-cchHHHHHhchhc
Q 009919 378 VKLANDS--RYG-LGCAVFSGSQHRAREIAAQI--QCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEGLRACCLV 451 (522)
Q Consensus 378 i~~~n~~--~~g-L~a~v~s~d~~~~~~~~~~l--~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~-~~g~~~l~~ft~~ 451 (522)
|+++|++ +|| |++||||+|.+.++++.+++ ..|.++||+.+..+.++..||++.+.||..- .+..+.--.|...
T Consensus 461 i~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~~~~~~~~~sg~n~~a~~~~~~~~~~~~ 540 (551)
T TIGR02288 461 VELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQSAAFSDFHGTGGNPAANASLSDGAFVAN 540 (551)
T ss_pred HHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccCCCCCCCCCCCCCCccCCcccchhhhhc
Confidence 9999998 566 99999999999999999988 5777888877666666678999999999764 3344444455544
Q ss_pred eE
Q 009919 452 KS 453 (522)
Q Consensus 452 k~ 453 (522)
|-
T Consensus 541 r~ 542 (551)
T TIGR02288 541 RF 542 (551)
T ss_pred ce
Confidence 43
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-79 Score=641.06 Aligned_cols=408 Identities=20% Similarity=0.291 Sum_probs=352.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHcccc
Q 009919 12 RAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK 91 (522)
Q Consensus 12 ~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~ 91 (522)
-+|+++++++|++|++.|+.++.++|.++|+++++.|+++.++|++++++|+||+..++. ++.++++++....
T Consensus 3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~~~ 75 (429)
T cd07121 3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKTPG 75 (429)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhcCc
Confidence 368999999999999999999999999999999999999999999999999999987663 3445555443211
Q ss_pred c--cCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHH
Q 009919 92 W--LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 169 (522)
Q Consensus 92 ~--~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l 169 (522)
. +.+..... .....+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++++++
T Consensus 76 ~~~~~~~~~~~----~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~ 151 (429)
T cd07121 76 TEDLTTTAWSG----DNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAI 151 (429)
T ss_pred ccccccccccC----CCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHH
Confidence 1 11110000 11345788999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHH
Q 009919 170 AAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 246 (522)
Q Consensus 170 ~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~ 246 (522)
.++|+|+|++|+|+|++ +.++.|++ ++|.|+||||+.+|+.|++. .+|+++|+|||||+||++||||+.|++.
T Consensus 152 ~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~ 227 (429)
T cd07121 152 AEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARD 227 (429)
T ss_pred HHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHH
Confidence 99999999999999854 67888987 79999999999999999875 4999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc--CCcE
Q 009919 247 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK--GAEI 324 (522)
Q Consensus 247 i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~--Ga~v 324 (522)
|++++|.|+||.|+|++|||||+++||+|+++|+++ + ..+++.++++++.++++++.+. |+++
T Consensus 228 i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~------~---------~~~i~~~~~~~v~~~i~~a~~~~~ga~~ 292 (429)
T cd07121 228 IVQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN------G---------AYVLNDEQAEQLLEVVLLTNKGATPNKK 292 (429)
T ss_pred HHhcccccCCCCCCccceEEEeHHHHHHHHHHHHHC------C---------CEEcCHHHHHHHHHhhcccCCCcccccc
Confidence 999999999999999999999999999999999885 1 1378999999999999998864 6899
Q ss_pred eeccCCCCCCCCCCCcccc---cEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCc--eeEEecCcHHH
Q 009919 325 LARGSFGHLSEGAVDQYFP---PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL--GCAVFSGSQHR 399 (522)
Q Consensus 325 ~~gG~~~~~~~~~~~~~~~---Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL--~a~v~s~d~~~ 399 (522)
+.||..... ....|.|++ |||+.+++++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.+.
T Consensus 293 ~~gg~~~~~-~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~ 371 (429)
T cd07121 293 WVGKDASKI-LKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVEN 371 (429)
T ss_pred ccCcCHHHH-HHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHH
Confidence 998852100 012477777 499999999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCC--CCcchHHHHHhchhceEEEEcc
Q 009919 400 AREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGF--GRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 400 ~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~--G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
++++++++++|+|+||+... ..+||||+|.|++ |..-| +..|..|++++.+
T Consensus 372 a~~~a~~l~aG~v~iN~~~~----~~~p~gG~k~s~~~~~~~~~----~~~~~~~~~~~~~ 424 (429)
T cd07121 372 LTKMARAMQTTIFVKNGPSY----AGLGVGGEGYTTFTIAGPTG----EGLTSARTFTRRR 424 (429)
T ss_pred HHHHHhhCCceEEEEcCCCc----CccccCCCccceEEecCCcC----cCccChhhhheee
Confidence 99999999999999997533 3589999999998 64444 4447777776543
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-78 Score=639.10 Aligned_cols=412 Identities=21% Similarity=0.274 Sum_probs=354.8
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHcc
Q 009919 10 LSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEG 89 (522)
Q Consensus 10 ~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~ 89 (522)
...+|++++++.|++|+..|+.++.++|.++|+++++.|+++.++|++++++|+||+..++.. +.++++++..
T Consensus 33 ~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~~~~ 105 (465)
T PRK15398 33 GVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAAEKT 105 (465)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHHHHh
Confidence 356899999999999999999999999999999999999999999999999999999988753 2344444443
Q ss_pred c--cccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHH
Q 009919 90 E--KWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 167 (522)
Q Consensus 90 ~--~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~ 167 (522)
. .++....... .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++++
T Consensus 106 ~~~~~~~~~~~~~----~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~ 181 (465)
T PRK15398 106 PGVEDLTTEALTG----DNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNE 181 (465)
T ss_pred ccccccccCcccC----CCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHH
Confidence 2 2222211111 123467889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCcEeeecCc-chhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHH
Q 009919 168 ALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVA 244 (522)
Q Consensus 168 ~l~~ag~p~g~v~vv~g~-~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa 244 (522)
+|.++|+|+|++++|+|. .+.++.|++ ++|+|+||||+.+|+.|++ ..+|+++|+|||||+||++|||++.|+
T Consensus 182 ~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~dADld~Aa 257 (465)
T PRK15398 182 AIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDETADIEKAA 257 (465)
T ss_pred HHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEecCCCHHHHH
Confidence 999999999999999985 477888987 7999999999999999998 359999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcE
Q 009919 245 QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEI 324 (522)
Q Consensus 245 ~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v 324 (522)
+.|++|+|.|+||.|+|++|||||++++|+|+++|+++. ++++++.+++++.++++++.++++++
T Consensus 258 ~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~---------------~~li~~~~~~~v~~~l~~~~~~~~~~ 322 (465)
T PRK15398 258 RDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKNG---------------AVLLTAEQAEKLQKVVLKNGGTVNKK 322 (465)
T ss_pred HHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHhhcccccchh
Confidence 999999999999999999999999999999999999851 26899999999999998654345577
Q ss_pred eeccCCCCCCCCCCCccc---ccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCc--eeEEecCcHHH
Q 009919 325 LARGSFGHLSEGAVDQYF---PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL--GCAVFSGSQHR 399 (522)
Q Consensus 325 ~~gG~~~~~~~~~~~~~~---~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL--~a~v~s~d~~~ 399 (522)
+.||..... ....|.++ +|||+.+++++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.++
T Consensus 323 ~~g~~~~~i-~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~ 401 (465)
T PRK15398 323 WVGKDAAKI-LEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDN 401 (465)
T ss_pred hhCCCHHHH-HHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHH
Confidence 776541000 01135555 4899999999999999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 400 AREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 400 ~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
++++++++++|+|+||+... +.+||||.|.|.+-- +|+.| ...|..|++.+++
T Consensus 402 a~~~a~~l~~G~V~iN~~~~----~~~p~gg~~~s~~~~-~~~~g-~~~~~~~~~~~~~ 454 (465)
T PRK15398 402 LNKMARAIQTSIFVKNGPSY----AGLGLGGEGFTTFTI-ATPTG-EGVTSARTFTRRR 454 (465)
T ss_pred HHHHHHhCCceEEEECCCCc----cccCcCCCCCceeee-cccCC-CCccchhhhhhhe
Confidence 99999999999999997532 358999999998522 37777 7888888876654
|
|
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-77 Score=634.92 Aligned_cols=439 Identities=19% Similarity=0.221 Sum_probs=379.7
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh----hHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL----GEIM 76 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~----~Ei~ 76 (522)
++.+++++.+ +++.++++|++|++.|+.++.++|.++|++++++|.+++++|+++++.|+||+..++.. .|+.
T Consensus 75 ~~l~~~~~~a---dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~~a~qa~~~~evd 151 (549)
T cd07127 75 VELGVTYPQC---DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFMMAFQAGGPHAQD 151 (549)
T ss_pred CcEEEEEchH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHHHHHhcccHHHHH
Confidence 4566677777 89999999999999999999999999999999999999999999999999999987753 1799
Q ss_pred HHHHHHHHHHHccccccC------cccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEec
Q 009919 77 TTCEKITWLLSEGEKWLK------PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 150 (522)
Q Consensus 77 ~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 150 (522)
.+++.++|+.+...++.. ++....+. .....+.++|+||+++|+|||||+++.+..+++||++||+||+||
T Consensus 152 ~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l---~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKP 228 (549)
T cd07127 152 RGLEAVAYAWREMSRIPPTAEWEKPQGKHDPL---AMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKP 228 (549)
T ss_pred HHHHHHHHHHHHHHhccccccccCCCCCcccc---cccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEEC
Confidence 999999998876554321 21111111 112245789999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHHHHhcCCCCCcEeeecCcc--hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeC
Q 009919 151 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA--ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 226 (522)
Q Consensus 151 s~~~~~~~~~l~~~~~~~l~~ag~p~g~v~vv~g~~--~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lel 226 (522)
|+.+|+++.++.+++.++|.++|+|+|+||+|+|++ +.++.|+. .++.|+||||+.+|+.|++.++ .+|+++|+
T Consensus 229 s~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~--~~~v~~El 306 (549)
T cd07127 229 HPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANAR--QAQVYTEK 306 (549)
T ss_pred CcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhc--cCcEEEec
Confidence 999999998888899999999999999999999853 67888887 8999999999999999999987 47999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchh---------hHHHHHHHHHHHHHhccCCCCCCCCCc
Q 009919 227 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD---------IYALFVSQVAKIVKSVSAGPPLAGKYD 297 (522)
Q Consensus 227 gGk~p~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~---------i~d~f~~~L~~~~~~~~~g~~~~~~~~ 297 (522)
|||||+||++|+|++.+++.+++|+|.|+||.|++++|||||++ ++|+|++.|+++++++ +|+|.+..++
T Consensus 307 GGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l-~Gdp~~~~~~ 385 (549)
T cd07127 307 AGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-LADPARAAAL 385 (549)
T ss_pred CCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-cCCccccccc
Confidence 99999999999999999999999999999999999999999999 8999999999999999 8999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHH
Q 009919 298 MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEV 377 (522)
Q Consensus 298 ~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 377 (522)
+|||+++++++++.+ +++.|+ +++||....++..+++++++|||+.+.+++|.+++||+||||++|++|+|.|||
T Consensus 386 ~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~ea 460 (549)
T cd07127 386 LGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHS 460 (549)
T ss_pred cCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHH
Confidence 999999999999865 444564 888886432222223456799999988899999999999999999999999999
Q ss_pred HHHHhcCC--C-CceeEEecCcHHHHHHHHHHh-ccC-CeeecCCcccCCCCCCCccCCCCCCCCC-cchHHHHHhchhc
Q 009919 378 VKLANDSR--Y-GLGCAVFSGSQHRAREIAAQI-QCG-VAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEGLRACCLV 451 (522)
Q Consensus 378 i~~~n~~~--~-gL~a~v~s~d~~~~~~~~~~l-~~G-~v~IN~~~~~~~~~~~PfGG~~~SG~G~-~~g~~~l~~ft~~ 451 (522)
|+++|++. + ||++||||+|.+.++++.+++ ++| .++||.....+.++.+||||++.||..- .+..+..-.|...
T Consensus 461 i~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~~~~~~~~fv~~ 540 (549)
T cd07127 461 IELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANPAANAALTDGAFVAN 540 (549)
T ss_pred HHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCcccccccchhhhhhc
Confidence 99999984 4 599999999999999999984 455 9999988877887778899999999874 4455555566655
Q ss_pred eE
Q 009919 452 KS 453 (522)
Q Consensus 452 k~ 453 (522)
|-
T Consensus 541 r~ 542 (549)
T cd07127 541 RF 542 (549)
T ss_pred ce
Confidence 54
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-77 Score=621.30 Aligned_cols=412 Identities=17% Similarity=0.190 Sum_probs=345.8
Q ss_pred HHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH--HHHHHHHccccc
Q 009919 15 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE--KITWLLSEGEKW 92 (522)
Q Consensus 15 v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~--~l~~~~~~~~~~ 92 (522)
++++++.|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+||+..++. .++..... ..+++....
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~-~~~~~~~~~~~~~~~~~~~--- 76 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDK-VIKNHFAAEYIYNVYKDEK--- 76 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHhccc---
Confidence 468999999999999999999999999999999999999999999999999998885 35544333 223332211
Q ss_pred cCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhc
Q 009919 93 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 172 (522)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~a 172 (522)
..+..+.. .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.+++.++
T Consensus 77 -~~~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~a 152 (439)
T cd07081 77 -TCGVLTGD---ENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAA 152 (439)
T ss_pred -cCceecCC---CCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHc
Confidence 11111111 12345789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHHH
Q 009919 173 GAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR 249 (522)
Q Consensus 173 g~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~~ 249 (522)
|+|+|+||+|+|.+ +.++.|++ ++|+|.||||+. |++.+++++||+++|||||||+||++|||++.|++.+++
T Consensus 153 G~P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~ 228 (439)
T cd07081 153 GAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVK 228 (439)
T ss_pred CCChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHH
Confidence 99999999999854 77889997 899999999997 577888899999999999999999999999999999999
Q ss_pred HHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccC
Q 009919 250 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 329 (522)
Q Consensus 250 ~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~ 329 (522)
|+|.|+||.|++.+|||||+++||+|+++|.+++ ||+++.++++++.++|+++.++|++++ ||.
T Consensus 229 ~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~-gg~ 292 (439)
T cd07081 229 SKTFDNGVICASEQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIV-GQD 292 (439)
T ss_pred HHhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCccc-CCC
Confidence 9999999999999999999999999999998853 789999999999999999999999775 443
Q ss_pred CCCCCCCCCCcccccE---EEecCC--CCCcccccccccceeeeeecCCHHHHHHHHhcC----CCCceeEEecCc---H
Q 009919 330 FGHLSEGAVDQYFPPT---VIVNVN--HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS----RYGLGCAVFSGS---Q 397 (522)
Q Consensus 330 ~~~~~~~~~~~~~~Pt---vl~~~~--~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gL~a~v~s~d---~ 397 (522)
.... ....|.|++|| ++.+++ ++|.+++||+||||++|++|+|+||||+++|++ +|||+++|||+| .
T Consensus 293 ~~~~-~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~ 371 (439)
T cd07081 293 AYKI-AAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAI 371 (439)
T ss_pred HHHH-HHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchH
Confidence 1000 01258899998 999888 999999999999999999999999999999975 799999999999 9
Q ss_pred HHHHHHHHHhccCCeeecCCc-ccCCCCCCCccCCCCC--CCCCcchHH-----HHHhchhceEEE
Q 009919 398 HRAREIAAQIQCGVAAINDFA-SNYMCQSLPFGGVKDS--GFGRFAGVE-----GLRACCLVKSVV 455 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~-~~~~~~~~PfGG~~~S--G~G~~~g~~-----~l~~ft~~k~v~ 455 (522)
++++++++++++|.|+||+.. +...-...-|||.+.+ |.|.++|.. +..+|++.|.|.
T Consensus 372 ~~a~~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (439)
T cd07081 372 ENMNQFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVA 437 (439)
T ss_pred HHHHHHHhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeee
Confidence 999999999999999999754 2222223345565543 333333322 345666666554
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-76 Score=611.22 Aligned_cols=384 Identities=22% Similarity=0.237 Sum_probs=332.2
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChh----hhh-------hhHHHHHHHHHHHH
Q 009919 17 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV----DAS-------LGEIMTTCEKITWL 85 (522)
Q Consensus 17 ~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~----ea~-------~~Ei~~~~~~l~~~ 85 (522)
..+++|++||..|+++|.++|.++|+++++.|.+++++|+++++.|+||+.. ++. ..|+..+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999777766643 332 24888888888888
Q ss_pred HHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHH
Q 009919 86 LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 165 (522)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~ 165 (522)
+...+.. . ...+......+...+++++|+|||++|+|| +| .+.++++++||++||+||+|||+.+|.++..+.+++
T Consensus 82 a~~~~~~-g-~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~ 157 (406)
T cd07079 82 AALPDPV-G-EVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEII 157 (406)
T ss_pred HhcCCCC-c-ccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHH
Confidence 7654422 1 111110001123567899999999999996 56 678899999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEeeecCc-c-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHH
Q 009919 166 QAALAAVGAPENLVDVITGF-A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVP 241 (522)
Q Consensus 166 ~~~l~~ag~p~g~v~vv~g~-~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~ 241 (522)
+++|.++|+|+|++|+|+|+ . +.++.|.. .+|+|+||||+.+|+.|++.+ ++|+++|||||||+||++|||++
T Consensus 158 ~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~dADl~ 234 (406)
T cd07079 158 QEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDESADLE 234 (406)
T ss_pred HHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCCCHH
Confidence 99999999999999999985 3 34666766 699999999999999999877 69999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcC
Q 009919 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKG 321 (522)
Q Consensus 242 ~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~G 321 (522)
.|++.+++|+|.|+| .|++++|||||+++||+|+++|+++++++ |
T Consensus 235 ~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~----------------------------------g 279 (406)
T cd07079 235 MAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALREA----------------------------------G 279 (406)
T ss_pred HHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHHC----------------------------------C
Confidence 999999999999999 99999999999999999999999977652 4
Q ss_pred CcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHH
Q 009919 322 AEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 401 (522)
Q Consensus 322 a~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~ 401 (522)
++++ +|.. ...|++|| ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++
T Consensus 280 a~~~-~g~~-------~~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~ 347 (406)
T cd07079 280 VELR-GDEE-------TLAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAE 347 (406)
T ss_pred CEEe-cCHH-------HHHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHH
Confidence 5644 3321 01377888 7889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCeeecCCcccCCCCCCCccCCCCCCC----CCcchHHHHHhchhceEEEE
Q 009919 402 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGF----GRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 402 ~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~----G~~~g~~~l~~ft~~k~v~~ 456 (522)
++++++++|.|+||++.... ..+||||.+.||+ |+++|.+++++||+.|++.+
T Consensus 348 ~~~~~~~~G~v~iN~~~~~~--~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~ 404 (406)
T cd07079 348 RFLREVDSAAVYVNASTRFT--DGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVR 404 (406)
T ss_pred HHHHhCCeeEEEEeCCCccc--CCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEe
Confidence 99999999999999875543 3479999999998 99999999999999999875
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-75 Score=609.71 Aligned_cols=389 Identities=20% Similarity=0.221 Sum_probs=336.5
Q ss_pred HHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhhh-------hHHHHHHHH
Q 009919 13 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASL-------GEIMTTCEK 81 (522)
Q Consensus 13 ~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~----~ea~~-------~Ei~~~~~~ 81 (522)
+++++++++|++||..|+++|..+|.++|+++++.|++++++|++++++|+||+. .++.. .|+..+++.
T Consensus 4 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~ 83 (417)
T PRK00197 4 EYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEG 83 (417)
T ss_pred hHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999999998887764 24432 477888888
Q ss_pred HHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHH
Q 009919 82 ITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFY 161 (522)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l 161 (522)
+++++...+.+ .. ..+......+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.+|.++.++
T Consensus 84 ~~~~a~~~~~~-g~-~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l 159 (417)
T PRK00197 84 LRQVAALPDPV-GE-VLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRAL 159 (417)
T ss_pred HHHHhhcCCCc-cc-cccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHH
Confidence 88887665432 11 111100011235688999999999999986 4 67889999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcEeeecCc-ch-hhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 162 FRIIQAALAAVGAPENLVDVITGF-AE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 162 ~~~~~~~l~~ag~p~g~v~vv~g~-~~-~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
++++.++|.++|+|+|++|+|+|+ .+ .++.|.. .+|+|+||||+.+|+.|++.+ ++|+++|||||||+||++|
T Consensus 160 ~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~~d 236 (417)
T PRK00197 160 VAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVDES 236 (417)
T ss_pred HHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCC
Confidence 999999999999999999999964 34 5677774 899999999999999999875 5999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++|+|.|+| .|++++|+|||+++||+|+++|++++++++.+
T Consensus 237 Adl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~---------------------------- 287 (417)
T PRK00197 237 ADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE---------------------------- 287 (417)
T ss_pred CCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe----------------------------
Confidence 9999999999999999999 99999999999999999999999999887421
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
++ ||.. ..+ |+ |||+ +++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 288 ------~~-~~~~------~~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~ 349 (417)
T PRK00197 288 ------LR-GDEA------ALA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDY 349 (417)
T ss_pred ------Ee-cCHH------HHH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCH
Confidence 11 1110 011 33 9998 46899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC----CcchHHHHHhchhceEEEEc
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG----RFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G----~~~g~~~l~~ft~~k~v~~~ 457 (522)
++++++++++++|+|+||++.... +..||||.+.||+| +.+|.+|+++||+.|+|+..
T Consensus 350 ~~~~~~~~~l~~G~v~VN~~~~~~--~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~ 411 (417)
T PRK00197 350 AAAERFLNEVDSAAVYVNASTRFT--DGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLG 411 (417)
T ss_pred HHHHHHHHhCCeeEEEEeCCCccC--CCCccccchhheeecCCCcCCCccchHhhcEEEEEEEC
Confidence 999999999999999999865433 35899999999999 99999999999999999763
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-74 Score=648.95 Aligned_cols=426 Identities=19% Similarity=0.210 Sum_probs=367.8
Q ss_pred EecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHH
Q 009919 6 YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWL 85 (522)
Q Consensus 6 ~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~ 85 (522)
+....+.+++++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+||+..++...+...+.+.+.++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~ 84 (862)
T PRK13805 5 EMAVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNS 84 (862)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999887643444444444433
Q ss_pred HHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHH
Q 009919 86 LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 165 (522)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~ 165 (522)
+. ..+.... ... ......+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++
T Consensus 85 ~~-~~~~~g~--~~~---~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~ 158 (862)
T PRK13805 85 YK-DEKTVGV--IEE---DDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIV 158 (862)
T ss_pred hc-CCCcccc--cCc---CCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHH
Confidence 32 1111110 110 11345678999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEeeecCc-chhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHH
Q 009919 166 QAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 242 (522)
Q Consensus 166 ~~~l~~ag~p~g~v~vv~g~-~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~ 242 (522)
.+++.++|+|+|+||+|+|. .+.++.|++ ++|+|+||||+.+ .+.++++++|+++|+|||||+||++|||++.
T Consensus 159 ~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~~pv~~e~gGk~p~iV~~dADl~~ 234 (862)
T PRK13805 159 LDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGM----VKAAYSSGKPALGVGAGNVPAYIDKTADIKR 234 (862)
T ss_pred HHHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHH----HHHHHhcCCCeEEECCCCCeEEEeCCCCHHH
Confidence 99999999999999999984 477899987 6999999999986 4566788999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCC
Q 009919 243 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA 322 (522)
Q Consensus 243 aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga 322 (522)
|++.|++|+|.|+||.|+|+++||||++++|+|+++|+++. ++|+++++++++.++++++.+.|+
T Consensus 235 Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g---------------~~l~~~~~~~~v~~~i~~a~~~~~ 299 (862)
T PRK13805 235 AVNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASHG---------------AYFLNKKELKKLEKFIFGKENGAL 299 (862)
T ss_pred HHHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHhC---------------CeeCCHHHHHHHHHHHhhccCCCc
Confidence 99999999999999999999999999999999999998851 579999999999999998866555
Q ss_pred cE-eeccCCCCCCCCCCCcccccEE------EecCCCCCcccccccccceeeeeecCCHHHHHHHHhc----CCCCceeE
Q 009919 323 EI-LARGSFGHLSEGAVDQYFPPTV------IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND----SRYGLGCA 391 (522)
Q Consensus 323 ~v-~~gG~~~~~~~~~~~~~~~Ptv------l~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gL~a~ 391 (522)
+. +.||..... ....|.+++||+ +.+++++|++++ |+||||++|++|+|+||||+++|+ .+|||+++
T Consensus 300 ~~~~~g~~~~~~-~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~ 377 (862)
T PRK13805 300 NADIVGQSAYKI-AEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAV 377 (862)
T ss_pred CccccCCCHHHH-HHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEE
Confidence 43 445541100 012478899997 678899999887 799999999999999999999998 47999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCcc--------cCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEccc
Q 009919 392 VFSGSQHRAREIAAQIQCGVAAINDFAS--------NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 459 (522)
Q Consensus 392 v~s~d~~~~~~~~~~l~~G~v~IN~~~~--------~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~ 459 (522)
|||+|.+.++++++++++|+|+||.... ....+.+|||| |.||+|++||+.||++|++.|+|++++.
T Consensus 378 i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~~ 452 (862)
T PRK13805 378 IYTNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRRE 452 (862)
T ss_pred EECCCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeeccc
Confidence 9999999999999999999999998631 13567899997 9999999999999999999999998663
|
|
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-73 Score=602.21 Aligned_cols=418 Identities=17% Similarity=0.149 Sum_probs=363.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHc
Q 009919 9 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 88 (522)
Q Consensus 9 ~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~ 88 (522)
..+.+++++++++|++|++.|++++.++|.++|+++++.|.+++++|++++.+|+||+..+++..+.....+.+.+++..
T Consensus 4 ~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~ 83 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKD 83 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 45788999999999999999999999999999999999999999999999999999998877543344455666555543
Q ss_pred cccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHH
Q 009919 89 GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 168 (522)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~ 168 (522)
.+. .. .... ..+...+.+++|+|||++|.|||||+.++.+++++||++||+||+|||+.+|.++..+++++.++
T Consensus 84 ~~~-~G--~~~~---~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~ 157 (488)
T TIGR02518 84 MKT-IG--ILSE---DKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKA 157 (488)
T ss_pred Ccc-cc--eecC---CCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHH
Confidence 322 11 1111 12345678999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcEeeecCc-chhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHH
Q 009919 169 LAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ 245 (522)
Q Consensus 169 l~~ag~p~g~v~vv~g~-~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~ 245 (522)
+.++|+|+|+||+|+|. .+.+++|++ ++|.|.||||+.++ +.++++++|+++|+|||||+||++|||++.|++
T Consensus 158 l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~----~~a~~~~~pv~~e~gGn~p~iV~~dADld~Aa~ 233 (488)
T TIGR02518 158 AEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMV----KAAYSSGTPAIGVGPGNGPAYIERTANVKKAVR 233 (488)
T ss_pred HHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHH----HHHHHcCCCEEEEcCCCCeEEEeCCCCHHHHHH
Confidence 99999999999999985 477898987 89999999999965 445567899999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHH-------HHhccCCCC-CCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 246 IAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI-------VKSVSAGPP-LAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 246 ~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~-------~~~~~~g~~-~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
.+++|+|+|+||.|+|.++||||+++||+|+++|+++ .+.+++|+| .++++++||+++.++++++.++++++
T Consensus 234 ~iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~a 313 (488)
T TIGR02518 234 DIIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLT 313 (488)
T ss_pred HHHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccc
Confidence 9999999999999999999999999999999999998 889999996 56788999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhc----CCCCceeEEe
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND----SRYGLGCAVF 393 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gL~a~v~ 393 (522)
+.+|+++++||.. ++++++++ ++|.||||++|++|+|+||||+++|+ .+|||+++||
T Consensus 314 v~~gakll~gg~~------------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~ 374 (488)
T TIGR02518 314 VPEDAKVLIGEQN------------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIH 374 (488)
T ss_pred cCCCCEEEEeCCC------------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEE
Confidence 9999999999861 25667776 79999999999999999999999988 6899999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCcc--------cC-CCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 394 SGSQHRAREIAAQIQCGVAAINDFAS--------NY-MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 394 s~d~~~~~~~~~~l~~G~v~IN~~~~--------~~-~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
|+|.+.++++++++++|+|+||++.. .. ....+-||+++.++.. | +-|+++++..|.|.+.-
T Consensus 375 T~d~~~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~--~-~v~~~~l~~~k~v~~~~ 445 (488)
T TIGR02518 375 SENKDIVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS--D-NITPENLINIRRVAYGV 445 (488)
T ss_pred eCCHHHHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC--C-CCCHHHhheeeEEEecc
Confidence 99999999999999999999996431 11 1112337777666665 3 88999999999987643
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-74 Score=596.26 Aligned_cols=374 Identities=19% Similarity=0.217 Sum_probs=329.6
Q ss_pred HHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH-HHHHHHHcccccc
Q 009919 15 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE-KITWLLSEGEKWL 93 (522)
Q Consensus 15 v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~-~l~~~~~~~~~~~ 93 (522)
++.++++|++|+..|+.+|.++|.++|++++++|+++.++|++++++|+||+..++...|+...++ .++++... +..
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~ 78 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV 78 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence 468999999999999999999999999999999999999999999999999999987557777777 67777642 211
Q ss_pred CcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcC
Q 009919 94 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 173 (522)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag 173 (522)
. . .... .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++|.++|
T Consensus 79 g-~-~~~~---~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG 153 (436)
T cd07122 79 G-V-IEED---EEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG 153 (436)
T ss_pred e-e-eccC---CCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcC
Confidence 1 1 1111 134567899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHHHH
Q 009919 174 APENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRA 250 (522)
Q Consensus 174 ~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~~~ 250 (522)
+|+|++++|+|.+ +.++.|++ ++|.|+||||++++ +.++++++|+++|+|||||+||++|||++.|++.+++|
T Consensus 154 ~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~----~~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~ 229 (436)
T cd07122 154 APEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMV----KAAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILS 229 (436)
T ss_pred CCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHH----HHHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHH
Confidence 9999999999854 67888887 89999999999965 45677899999999999999999999999999999999
Q ss_pred HHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhc-------cCCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHcCC
Q 009919 251 ALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV-------SAGPP-LAGKYDMGALCLLEHSEKLQNLVNDALDKGA 322 (522)
Q Consensus 251 ~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~-------~~g~~-~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga 322 (522)
+|.|+||.|+++++||||+++||+|+++|+++...+ ++|++ .+.++++||+++..+.+++.+.+..+..+|+
T Consensus 230 ~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga 309 (436)
T cd07122 230 KTFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDT 309 (436)
T ss_pred hhccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCC
Confidence 999999999999999999999999999999998876 67777 3567788999888888887777665555666
Q ss_pred cEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcC----CCCceeEEecCcHH
Q 009919 323 EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS----RYGLGCAVFSGSQH 398 (522)
Q Consensus 323 ~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gL~a~v~s~d~~ 398 (522)
+++.+| +++++++|+++ +|.||||++|++|+|+||||+++|++ +|||++||||+|.+
T Consensus 310 ~vl~~~------------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~ 370 (436)
T cd07122 310 KVLVAE------------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEE 370 (436)
T ss_pred eEEEEe------------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHH
Confidence 665544 35788899987 56799999999999999999999997 89999999999999
Q ss_pred HHHHHHHHhccCCeeecCCc
Q 009919 399 RAREIAAQIQCGVAAINDFA 418 (522)
Q Consensus 399 ~~~~~~~~l~~G~v~IN~~~ 418 (522)
+++++++++++|+|+||+..
T Consensus 371 ~a~~~~~~l~aG~V~IN~~~ 390 (436)
T cd07122 371 VIEEFALRMPVSRILVNTPS 390 (436)
T ss_pred HHHHHHhhCCceEEEEeCCc
Confidence 99999999999999999753
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-72 Score=612.05 Aligned_cols=383 Identities=18% Similarity=0.210 Sum_probs=332.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHhcC--CChhhhh---hhHHHHHHHHH
Q 009919 14 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEIS------SRDTG--KTMVDAS---LGEIMTTCEKI 82 (522)
Q Consensus 14 ~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~------~~e~G--k~~~ea~---~~Ei~~~~~~l 82 (522)
.+++++++|++|++.|+++|.++|.++|+++++.|+++.++|++++ ++|+| |++.++. ..|+..+++.+
T Consensus 295 ~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~~ 374 (718)
T PLN02418 295 GAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAASI 374 (718)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHHH
Confidence 4899999999999999999999999999999999999999999996 67999 8877764 45999999999
Q ss_pred HHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHH
Q 009919 83 TWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 162 (522)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~ 162 (522)
+|++... +... +..+......+...++.++|+|||++|+||| |+.+. +++++||++||+||+|||+.+|.++..++
T Consensus 375 ~~~a~~~-~~~g-~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~ 450 (718)
T PLN02418 375 RQLADME-DPIG-RVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILH 450 (718)
T ss_pred HHHhcCc-cccC-ccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHH
Confidence 9998873 3321 1111000011233578999999999999999 99998 89999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCC----cEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 163 RIIQAALAAVGAPEN----LVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 163 ~~~~~~l~~ag~p~g----~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
+++.+ + +|+| ++|+|+|+.+.++.|+. .+|+|+||||+. .+++.+++++||+++|||||||+||++
T Consensus 451 ~l~~e----A-lP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt~---~i~~~aa~~~k~v~lELGGk~p~iV~~ 522 (718)
T PLN02418 451 KVITD----A-IPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNK---LVSQIKASTKIPVLGHADGICHVYVDK 522 (718)
T ss_pred HHHHH----H-ccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCHH---HHHHHHHhcCCCEEEeCCCcceEEEeC
Confidence 88774 5 7777 49999986677888886 999999999996 466667778899999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
|||++.|++.+++++|.| ||.|++.+|+|||+++||+ | .+.++|++
T Consensus 523 DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~--------------G-------------------~~~~~i~~ 568 (718)
T PLN02418 523 SADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN--------------G-------------------GLNDLLVA 568 (718)
T ss_pred CCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc--------------c-------------------cHHHHHHH
Confidence 999999999999999999 9999999999999999997 1 25789999
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
++++|+++ +||.+. .| ++. + ++|.+++||+|||+++|++|+|+||||+++|+++|||++||||+|
T Consensus 569 a~~~Ga~l-~Gg~~~------~g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d 633 (718)
T PLN02418 569 LRSAGVTL-YGGPRA------SK------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTED 633 (718)
T ss_pred HHHCCCEE-ECCccc------cC------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCC
Confidence 99999999 687631 13 233 4 789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCC--CCcc--hHHHHHhchhceEEEEccc
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGF--GRFA--GVEGLRACCLVKSVVEDRW 459 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~--G~~~--g~~~l~~ft~~k~v~~~~~ 459 (522)
.+++.++++++++|.|+||++.... ...||||+|+||+ |+.| |++||++||..|+|+....
T Consensus 634 ~~~a~~~a~~l~aG~V~IN~~~~~~--~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~g 698 (718)
T PLN02418 634 SEVAEIFLRQVDSAAVFHNASTRFS--DGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGNG 698 (718)
T ss_pred HHHHHHHHHhCCeeEEEEeCCCCCC--CCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECCC
Confidence 9999999999999999999874432 3579999999999 9885 9999999999999987653
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-70 Score=567.51 Aligned_cols=376 Identities=15% Similarity=0.145 Sum_probs=332.1
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhh----------hhHHHHHHHHHHHHHHcc
Q 009919 20 AQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDAS----------LGEIMTTCEKITWLLSEG 89 (522)
Q Consensus 20 ~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~----------~~Ei~~~~~~l~~~~~~~ 89 (522)
++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+||++.+.. ..|+...++.+++++...
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~ 80 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV 80 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence 3689999999999999999999999999999999999999999999865432 137888888888888654
Q ss_pred ccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHH
Q 009919 90 EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 169 (522)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l 169 (522)
.+.... ..+. ....+++++|+|||++|+|||||+. .++++++||++||+||+|||+.+|.++..+.+++.+++
T Consensus 81 ~~~~~~-~~~~-----~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~ 153 (397)
T cd07077 81 GHIQDV-LLPD-----NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAAD 153 (397)
T ss_pred Ccccce-EecC-----CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHh
Confidence 443221 1111 2356899999999999999999999 99999999999999999999999999999999998764
Q ss_pred HhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHH
Q 009919 170 AAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 246 (522)
Q Consensus 170 ~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~ 246 (522)
++|+|++++++++|.+ +.+..|+. .+|.|+||||+.+++.+++.+. .+|+++|+||+||+||++|||++.|++.
T Consensus 154 -~~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~dad~~~a~~~ 230 (397)
T cd07077 154 -AAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDETADEERASGS 230 (397)
T ss_pred -hcCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcCCCCHHHHHHH
Confidence 5789999999999754 67888887 7999999999999999988774 7999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEee
Q 009919 247 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILA 326 (522)
Q Consensus 247 i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~ 326 (522)
+++++|.| ||.|+++++||||++++|+|+++|+++++. +|++++.
T Consensus 231 ~~~~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~ 275 (397)
T cd07077 231 VHDSKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQ 275 (397)
T ss_pred HHHhhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCC
Confidence 99999999 999999999999999999999999997754 4677776
Q ss_pred ccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHH----HHHHHHhcCCCCceeEEecCcHHHHHH
Q 009919 327 RGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE----EVVKLANDSRYGLGCAVFSGSQHRARE 402 (522)
Q Consensus 327 gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~----eai~~~n~~~~gL~a~v~s~d~~~~~~ 402 (522)
||. +.|+.|| ++|.+++||+||||++|++|+|+| +|++++|+++|||++||||+|.+++++
T Consensus 276 g~~---------~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~ 340 (397)
T cd07077 276 ETK---------PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDD 340 (397)
T ss_pred Cce---------eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHH
Confidence 653 3566675 789999999999999999999996 667788999999999999999999999
Q ss_pred HHHHhccCCeeecCCcccCCCCCCCccCCC--CCCCCCcch-HHHHHhchhceEEE
Q 009919 403 IAAQIQCGVAAINDFASNYMCQSLPFGGVK--DSGFGRFAG-VEGLRACCLVKSVV 455 (522)
Q Consensus 403 ~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~--~SG~G~~~g-~~~l~~ft~~k~v~ 455 (522)
+++++++|+|+||+...+.....+||||.+ .||+|+++| .+|+++|++.|+|+
T Consensus 341 ~~~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 341 FVQYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred HHHhCCEEEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence 999999999999998766543458999999 899999999 99999999999986
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-67 Score=545.92 Aligned_cols=362 Identities=38% Similarity=0.607 Sum_probs=334.1
Q ss_pred HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHccccccCcccccC
Q 009919 21 QARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSS 100 (522)
Q Consensus 21 ~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~ 100 (522)
+|++|+.+|++++.++|.++|+++++.|.++.++|+++++.|+||+..++. .|+..+++.++++++.+.++.......
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev~~~~~~l~~~~~~~~~~~~~~~~~- 79 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEAL-GEVARAIDTFRYAAGLADKLGGPELPS- 79 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccc-
Confidence 688999999999999999999999999999999999999999999998874 799999999999988877665422111
Q ss_pred CcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEe
Q 009919 101 GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180 (522)
Q Consensus 101 ~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag~p~g~v~ 180 (522)
...+...+++++|+|||++|+|||+|+...++.+++||++||+||+|||+.+|.++..+.+++. ++|+|+++++
T Consensus 80 --~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~----~ag~p~~~v~ 153 (367)
T cd06534 80 --PDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQ----EAGLPPGVVN 153 (367)
T ss_pred --cCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH----hcCCCcCeEE
Confidence 1234567899999999999999999999999999999999999999999999999988877655 6899999999
Q ss_pred eecCcch-hhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCC
Q 009919 181 VITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQ 257 (522)
Q Consensus 181 vv~g~~~-~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~~~~~~n~Gq 257 (522)
+++|+.+ .++.|+. .+|.|.||||+++++.|.+.++++++|+++|+||+||+||++|+|++.|++.+++++|.++||
T Consensus 154 ~~~~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq 233 (367)
T cd06534 154 VVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQ 233 (367)
T ss_pred EEEcCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 9999764 7788876 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCCCCCCCCC
Q 009919 258 NCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGA 337 (522)
Q Consensus 258 ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~ 337 (522)
.|+++++||||++++|+|+++|+
T Consensus 234 ~C~s~~~v~v~~~~~~~f~~~l~--------------------------------------------------------- 256 (367)
T cd06534 234 ICTAASRLLVHESIYDEFVEKLV--------------------------------------------------------- 256 (367)
T ss_pred CCCCCcEEEEcHHHHHHHHHhhc---------------------------------------------------------
Confidence 99999999999999999999987
Q ss_pred CCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCC
Q 009919 338 VDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 417 (522)
Q Consensus 338 ~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~~G~v~IN~~ 417 (522)
||+.+++++++++++|+|||+++|++|++++|||+++|++++||++||||+|...+++++.++++|.|+||+.
T Consensus 257 -------tl~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~ 329 (367)
T cd06534 257 -------TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDS 329 (367)
T ss_pred -------eeeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCC
Confidence 5666778889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 418 ASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 418 ~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
.... .+.+||||.++||+|+++|++++++||+.|+|.
T Consensus 330 ~~~~-~~~~pfgg~~~sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 330 SIGV-GPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred CCCC-CCCCCCCCcccCccCCCChHHHHHHhceEEEEe
Confidence 7765 567999999999999999999999999999975
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-68 Score=533.46 Aligned_cols=427 Identities=22% Similarity=0.386 Sum_probs=385.4
Q ss_pred ceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHH
Q 009919 2 KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK 81 (522)
Q Consensus 2 ~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~ 81 (522)
.++++|..++.++++++++.|.+|+..|..+++++|..+|++++++|+.+..+|..++.+|.||+...+ ..|+..++++
T Consensus 139 dvVG~V~ea~~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGKtl~na-IAEVREAVDF 217 (769)
T COG4230 139 DIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKTLSNA-IAEVREAVDF 217 (769)
T ss_pred HCeeeeeecCHHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhH-HHHHHHHHHH
Confidence 467999999999999999999999999999999999999999999999999999999999999999998 5899999999
Q ss_pred HHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHH
Q 009919 82 ITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFY 161 (522)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l 161 (522)
++||+.+.+.-+. ...++|+|.+.+|+|||||+....++++.||++||+|+-||.|++|+.+..-
T Consensus 218 lrYYA~~ar~~~g---------------~~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~a 282 (769)
T COG4230 218 LRYYAGQARDTFG---------------NLTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQA 282 (769)
T ss_pred HHHHHHHHhcccC---------------ccccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHHH
Confidence 9999988765211 1345699999999999999999999999999999999999999999998877
Q ss_pred HHHHHHHHHhcCCCCCcEeeecCcch-hhhhHhc--CccEEEEeCCHHHHHHHHHHHhcC---CCceeeeCCCcceEEEc
Q 009919 162 FRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKT---LTPVTLELGGKDAFIVC 235 (522)
Q Consensus 162 ~~~~~~~l~~ag~p~g~v~vv~g~~~-~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~---~~pv~lelgGk~p~iV~ 235 (522)
.+++. ++|+|++++|+++|+++ .|..|+. +++.|+||||+++++.|.++.+++ ..|++.|.||.|.|||+
T Consensus 283 V~ll~----eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~~pLIAETGGqNAMIVD 358 (769)
T COG4230 283 VRLLH----EAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVD 358 (769)
T ss_pred HHHHH----HcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCCCceEeccCCcceEEee
Confidence 77655 79999999999999985 7999998 999999999999999999988873 47899999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 236 ~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
.+|--|..+..++.|+|..+||+|.+.+.+++++++.|..+++|+-.+.++++|+|..-.+|+||+|+.++.+.++++|+
T Consensus 359 SsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~ 438 (769)
T COG4230 359 SSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQ 438 (769)
T ss_pred chhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceeccccccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecC--CHHHHHHHHhcCCCCceeEEe
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVVKLANDSRYGLGCAVF 393 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gL~a~v~ 393 (522)
.....|-.+..-... .....|.|++||++. ++ +-.-++.|+|||||.|++|+ ++++.|+-+|.+.|||+..|+
T Consensus 439 ~mr~~gr~v~q~~~~---~~~q~GtFv~Ptl~E-l~-~~~eL~rEVFGPVLHVvRy~~~~l~~vi~~INatGyGLT~GvH 513 (769)
T COG4230 439 TMRSKGRLVHQAAAP---NSLQKGTFVAPTLIE-LE-NLDELQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVH 513 (769)
T ss_pred HHHhcccchhhccCC---CccCCceeeCceeEE-cC-CHHHHHHHhccceeEEEEecHHHHHHHHHHHhccCcceeeeee
Confidence 887777444222110 011469999999985 33 33347899999999999995 699999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC-CcchHHHHHhchhceE
Q 009919 394 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKS 453 (522)
Q Consensus 394 s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~~l~~ft~~k~ 453 (522)
|+-.+.+.++.++.++|+++||.-++......+||||.|-||.| +.+|+..|..|...+.
T Consensus 514 tRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~p 574 (769)
T COG4230 514 TRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSERP 574 (769)
T ss_pred cchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhcCC
Confidence 99999999999999999999999766655567899999999999 6899999999987765
|
|
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-68 Score=584.19 Aligned_cols=384 Identities=16% Similarity=0.189 Sum_probs=311.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhh--------hh-------HHHHH
Q 009919 14 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDAS--------LG-------EIMTT 78 (522)
Q Consensus 14 ~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~--------~~-------Ei~~~ 78 (522)
.++..+++|++||.+|+++|.++|.++|++++++|.+++++|++ +.||++.+++ +. |+..+
T Consensus 287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~~----e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~ 362 (715)
T TIGR01092 287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEILA----ENKKDVAAAQGAGYAASLVARLSMSPSKISSL 362 (715)
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHH----HHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence 37888999999999999999999999999999999999999975 5555554432 22 34455
Q ss_pred HHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++.++++++. .+.. .+..+......+...+++++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|.++
T Consensus 363 ~~~l~~~a~~-~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~ 438 (715)
T TIGR01092 363 AISLRQLAAM-EDPI-GRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSN 438 (715)
T ss_pred HHHHHHHhcC-CCcc-cccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHH
Confidence 5555655542 1111 00010000001223468899999999999999 9998 68999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
..+++++.++| ..|.+++++++|+|..+.++.|.. .+|+|+||||+.+|+.|++.++ +|+++|||||||+||++
T Consensus 439 ~~l~~l~~~al-p~g~~~~~~~~v~~~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~ 514 (715)
T TIGR01092 439 AILHKVITEAI-PIHVGKKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDK 514 (715)
T ss_pred HHHHHHHHHHc-CCCCCCcEEEEeCChHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECC
Confidence 99999988652 333334579999864456777776 8999999999999999999875 99999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
|||++.|++.++.++|. +||+|+|++|||||++++|+ | .+.+++++
T Consensus 515 dADl~~A~~~i~~~~~~-~GQ~C~a~~rvlV~~~i~d~----------------~-----------------~~~~~v~~ 560 (715)
T TIGR01092 515 SASVDMAKRIVRDAKCD-YPAACNAMETLLVHKDLLRN----------------G-----------------LLDDLIDM 560 (715)
T ss_pred CCCHHHHHHHHHHHhCC-CCCccccCcEEEEehhhccc----------------h-----------------hHHHHHHH
Confidence 99999998666666655 59999999999999999985 0 25567777
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
+.++|++++ ||... . .|+. ..+++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 561 ~~~~Ga~l~-Gg~~~------~-~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d 627 (715)
T TIGR01092 561 LRTEGVTIH-GGPRF------A-AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTED 627 (715)
T ss_pred HHHCCCEEE-CCcch------h-heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCC
Confidence 778899984 77521 1 2332 135689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCC----cchHHHHHhchhceEEEEcc
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR----FAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~----~~g~~~l~~ft~~k~v~~~~ 458 (522)
.+.++++++++++|.|+||++.. . ...+||||+|.||+|+ .+|++++++||+.|+|....
T Consensus 628 ~~~a~~~~~~i~sG~V~vN~~~~-~-~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~ 691 (715)
T TIGR01092 628 ENVAEFFLQHVDSAAVFHNASTR-F-SDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGK 691 (715)
T ss_pred HHHHHHHHHhCCeeEEEEeCCCC-C-CCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECC
Confidence 99999999999999999998643 2 3458999999999995 48999999999999998764
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-68 Score=546.17 Aligned_cols=377 Identities=18% Similarity=0.185 Sum_probs=317.0
Q ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHhcCCCh--h----hhhhhHHHHHHHHHHHHHHcc
Q 009919 22 ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEI------SSRDTGKTM--V----DASLGEIMTTCEKITWLLSEG 89 (522)
Q Consensus 22 a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~------~~~e~Gk~~--~----ea~~~Ei~~~~~~l~~~~~~~ 89 (522)
|++||+.|+++|.++|.++|+++++.|+++.++|+++ +++|+||+. . ++ ..|+..+++.++++++.+
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a-~~ev~~~~~~~~~~a~~a 79 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLT-EGRLKGIADGVKDVIELA 79 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCC-HHHHHHHHHHHHHHhcCC
Confidence 5788999999999999999999999999999999999 899999993 2 33 368999999999999877
Q ss_pred ccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHH
Q 009919 90 EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 169 (522)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l 169 (522)
..+ . +..+......+...+++++|+|||++|+||| | ..+++++++||++||+||+|||+.+|.++..++++++++|
T Consensus 80 ~~~-g-~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al 155 (398)
T TIGR00407 80 DPV-G-KVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDAL 155 (398)
T ss_pred CCC-c-ccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHH
Confidence 653 2 1111100112345688999999999999997 6 6688899999999999999999999999999999999999
Q ss_pred HhcCCCCCcEeeecCc-ch-hhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHH
Q 009919 170 AAVGAPENLVDVITGF-AE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ 245 (522)
Q Consensus 170 ~~ag~p~g~v~vv~g~-~~-~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~ 245 (522)
.++|+|+|+||+|+|. .+ .++.|.. ++|+|+||||+.+|+.+++. ..+|+++|+|||||+||++|||++.|++
T Consensus 156 ~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~---~~~~~~~e~gGk~p~iV~~dADl~~Aa~ 232 (398)
T TIGR00407 156 AQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT---STIPVLGHGDGICHIYLDESADLIKAIK 232 (398)
T ss_pred HHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh---CCCCEEEecCCcceEEEeCCCCHHHHHH
Confidence 9999999999999974 33 6777776 89999999999999988875 3589999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEe
Q 009919 246 IAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 325 (522)
Q Consensus 246 ~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~ 325 (522)
.+++|+|.+ ||.|++++|+|||+++||+|+++|+++++++.+ .++ . .+.+.+++.
T Consensus 233 ~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~--------~~~----~--~~~i~~~v~---------- 287 (398)
T TIGR00407 233 VIVNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV--------TIH----A--DAYALKLLE---------- 287 (398)
T ss_pred HHHhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC--------EEe----c--CHHHHHHHh----------
Confidence 999999965 999999999999999999999999999987642 121 1 123333332
Q ss_pred eccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHH
Q 009919 326 ARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 405 (522)
Q Consensus 326 ~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~ 405 (522)
+|. ||++ ++ +|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 288 -~g~--------------~tv~-~~--~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~ 349 (398)
T TIGR00407 288 -LGP--------------ATEA-IV--CKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQN 349 (398)
T ss_pred -ccC--------------cccc-cc--ccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHH
Confidence 121 3554 33 37899999999999999999999999999999999999999999999999999
Q ss_pred HhccCCeeecCCcccCCCCCCCccCCCC-----CCCCCcchHHHHHhchhce
Q 009919 406 QIQCGVAAINDFASNYMCQSLPFGGVKD-----SGFGRFAGVEGLRACCLVK 452 (522)
Q Consensus 406 ~l~~G~v~IN~~~~~~~~~~~PfGG~~~-----SG~G~~~g~~~l~~ft~~k 452 (522)
++++|.|+||++.... ...||| .+. ++.+...|+.+++.||..|
T Consensus 350 ~i~~G~v~iN~~~~~~--~~~pfG-~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 350 GVDSAAVYHNASTRFT--DGFRFG-FGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred hCCeeEEEEeCCCCcC--CCcccc-cceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 9999999999975433 347996 442 3455677999999988765
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-66 Score=509.63 Aligned_cols=424 Identities=28% Similarity=0.445 Sum_probs=375.8
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHH--hhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~--w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
|.+|++++.++..|+++++++|+.||.. |.++|..+|.+.+.+++++++++.+||+.+.+.|.|.-..-+.-.-+.-.
T Consensus 447 ~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~eelat~e~ldagavytlalkthvgms 526 (881)
T KOG2452|consen 447 GSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMS 526 (881)
T ss_pred CCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccchhhhhhhccccceeeeeehhhcCce
Confidence 5789999999999999999999999975 99999999999999999999999999999999999976665544556667
Q ss_pred HHHHHHHHHccccccCcccccCC-cccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSG-RSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 157 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~ 157 (522)
++..||++...++.- ...+|-+ ......-+...++|.|||++|.|||||+....|+.+.+|++-
T Consensus 527 i~~~ryfagwcdkiq-g~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk~aaclaa~-------------- 591 (881)
T KOG2452|consen 527 IQTFRYFAGWCDKIQ-GSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAQ-------------- 591 (881)
T ss_pred ehHHHHhhhhhhhcc-CceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHHHHHHHHHH--------------
Confidence 888888877655532 2222211 111123456789999999999999999999999999888731
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEeeecCcch-hhhhHhc--CccEEEEeCCHHHHHHHHHHHhc-CCCceeeeCCCcceEE
Q 009919 158 GCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASK-TLTPVTLELGGKDAFI 233 (522)
Q Consensus 158 ~~~l~~~~~~~l~~ag~p~g~v~vv~g~~~-~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~-~~~pv~lelgGk~p~i 233 (522)
. .+++. -.|++++++|++. .++.|.. +++.|-||||+++|+.|++.|+. +.|.|.+||||++|+|
T Consensus 592 --~-~k~~e--------~sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sca~snikkvslelgg~sp~i 660 (881)
T KOG2452|consen 592 --V-LKFAE--------LTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGESPFI 660 (881)
T ss_pred --H-hhhhh--------hcceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHHhhcchheeeeeccCCCceE
Confidence 1 12211 3589999999875 5888877 99999999999999999999886 5799999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHH
Q 009919 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 313 (522)
Q Consensus 234 V~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~ 313 (522)
++.||||+.|++....+.|+|-|.+|++..|+||.+++.|+|+.++.++.+++++|+|+|.+++-||.-...|..++.++
T Consensus 661 ifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey 740 (881)
T KOG2452|consen 661 IFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEY 740 (881)
T ss_pred EEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccccccCCchhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888999999999
Q ss_pred HHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecC--CHHHHHHHHhcCCCCceeE
Q 009919 314 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVVKLANDSRYGLGCA 391 (522)
Q Consensus 314 i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gL~a~ 391 (522)
++.+++.||++.+||.+. .+.|.|++|||+++++..|-+..||-||||+.|.+|+ |+|+.++.+|++++||++.
T Consensus 741 ~~~~v~~ga~~~~gg~~~----~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~g 816 (881)
T KOG2452|consen 741 CQHGVKEGATLVCGGNQV----PRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASG 816 (881)
T ss_pred HHHHhccCcEEEECCccC----CCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhccccccccccc
Confidence 999999999999999975 4679999999999999999999999999999999996 5899999999999999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 392 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 392 v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
|||+|.....++++.|++|+|+||.+.-. +-..||||+++||+|+..|.+.+.+|...|+|+.
T Consensus 817 vftrd~~k~l~v~~~l~agtvfvnty~kt--dvaapfggfkqsgfgkd~ge~alneyl~~ktit~ 879 (881)
T KOG2452|consen 817 VFTRDINKALYVSDKLQAGTVFVNTYNKT--DVAAPFGGFKQSGFGKDLGEAALNEYLRVKTVTF 879 (881)
T ss_pred eeecccchhhhhhhhhccceEEEeecccc--ccccCCCCccccccccchhHHHHhhheeeEEEEe
Confidence 99999999999999999999999986443 2358999999999999999999999999999864
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-64 Score=494.15 Aligned_cols=456 Identities=21% Similarity=0.334 Sum_probs=400.1
Q ss_pred ceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH-HhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 2 KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYII-EHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 2 ~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~-~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
..++.+..++..++++|+++|.+|++.|..+|..+|.+++++.++++. +++-+|..+.+.-.||...+|..+-+...++
T Consensus 85 ~~lA~~~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistkyr~~l~aatMlgqgKt~~qAeiDa~~eLid 164 (561)
T KOG2455|consen 85 HVLAKVYYATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTKYRYDLLAATMLGQGKTAIQAEIDAAAELID 164 (561)
T ss_pred hhhhheeeccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCcchHHHHHHHHHHHHH
Confidence 457889999999999999999999999999999999999999999999 8899999999999999999986655677788
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeec-eEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGC 159 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~ 159 (522)
.+|+.++.+..+..-+.... ..+.++...++|+ |-|..|+||||-....--..+|||+ ||+|++|||..+.+++.
T Consensus 165 f~R~na~ya~eL~~~qpi~~---~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaLM-GN~VLwkPS~ta~lssY 240 (561)
T KOG2455|consen 165 FFRFNAKYASELYAQQPISQ---TKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAALSSY 240 (561)
T ss_pred HHHHhHHHHHHhhhcCCccc---cCCCCcceeeccccceeEEecccceeeeccccccChhhh-cceeeecccchhHHHHH
Confidence 88887777666543222221 2346677889999 9999999999988766666677776 99999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCC------CceeeeCCCcc
Q 009919 160 FYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL------TPVTLELGGKD 230 (522)
Q Consensus 160 ~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~------~pv~lelgGk~ 230 (522)
++.++++ |||+|+|++|+|++++ ..++.+.+ ++..+.||||+.+-+.+.+..++++ -+++.|+||||
T Consensus 241 ii~~il~----EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkN 316 (561)
T KOG2455|consen 241 IIYRILR----EAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKN 316 (561)
T ss_pred HHHHHHH----HcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHHHHHhhhhhhhcchhhhccCCCcc
Confidence 8888766 7999999999999987 56787776 9999999999999999999888765 47899999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCC-CCCCCcccccCCHHHHHH
Q 009919 231 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP-LAGKYDMGALCLLEHSEK 309 (522)
Q Consensus 231 p~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~-~~~~~~~g~li~~~~~~~ 309 (522)
--+|.++||++.++...++++|..+||.|.|.+|+||+++..+.+.+.|.+.-.++++|+| .+.++.+|++|+.+.++|
T Consensus 317 FHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~r 396 (561)
T KOG2455|consen 317 FHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFAR 396 (561)
T ss_pred eEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhhcccCCccccccchhhhhccHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999997 788899999999999999
Q ss_pred HHHHHHHHHHc-CCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCC--HHHHHHHH-hcCC
Q 009919 310 LQNLVNDALDK-GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVKLA-NDSR 385 (522)
Q Consensus 310 ~~~~i~~a~~~-Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~ 385 (522)
++++|+.|.+. ..++++||.. .+..|+|+.|||+..-+|.+++|.||+|||||+|+.|+| ++|+++++ |.++
T Consensus 397 l~k~le~ak~~~~leiL~GGk~----DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~ 472 (561)
T KOG2455|consen 397 LKKVLEHAKKDPELEILAGGKC----DDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTP 472 (561)
T ss_pred HHHHHHhhccCccceeeecCcc----cCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcCCc
Confidence 99999998753 4679999984 356899999999998899999999999999999999965 89999998 4589
Q ss_pred CCceeEEecCcHHHHHHHHHHhc--cCCeeecCCcccCCCCCCCccCCCCCCCC-CcchHHHHHhchhceEEEEcccccc
Q 009919 386 YGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDRWWPY 462 (522)
Q Consensus 386 ~gL~a~v~s~d~~~~~~~~~~l~--~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~~l~~ft~~k~v~~~~~~~~ 462 (522)
|||+.+||++|.+.+.+..++|+ +|+.+|||-.+.......||||...||.. +.+|+.-+..||.++++-. .+
T Consensus 473 YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp~~l~RwtSp~~ikE-t~--- 548 (561)
T KOG2455|consen 473 YALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGGPHYLLRWTSPLSIKE-TF--- 548 (561)
T ss_pred ceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCCCceEEEeecCcchhhh-cc---
Confidence 99999999999999999998876 89999999877766667999999999986 6889999999999887633 22
Q ss_pred cccCCCCCCCCCCC
Q 009919 463 IKTKIPKPIQYPVA 476 (522)
Q Consensus 463 ~~~~~~~~~~~p~~ 476 (522)
..+.++.||++
T Consensus 549 ---~~l~d~~yp~~ 559 (561)
T KOG2455|consen 549 ---VPLTDVKYPSM 559 (561)
T ss_pred ---cCCcccCcCCC
Confidence 22345777763
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-64 Score=474.37 Aligned_cols=447 Identities=22% Similarity=0.366 Sum_probs=406.1
Q ss_pred ceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHH
Q 009919 2 KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK 81 (522)
Q Consensus 2 ~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~ 81 (522)
++|+.|..++.+|.+.++..+++|.+.|...+..+|.++.+++.+.|+...+.|-++++.|+||-..|. .+|+...++.
T Consensus 44 ~pia~v~~asv~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~lvslemgkilaeg-vgevqeyvdi 122 (507)
T KOG2453|consen 44 SPIANVQNASVQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKLVSLEMGKILAEG-VGEVQEYVDI 122 (507)
T ss_pred ChhHHHhhccHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhHhhhc-chhHHHHHHH
Confidence 677888889999999999999999999999999999999999999999999999999999999999888 6899999998
Q ss_pred HHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHH
Q 009919 82 ITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFY 161 (522)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l 161 (522)
++|.....+.+ .....|..+ ++.-....+.|+|+|++|+.+|||-...-|+-.-|+.+||+|++||.+.+|+++...
T Consensus 123 cdyavglsr~l-~g~i~pser--pghalleqwnplg~vgvitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTiAv 199 (507)
T KOG2453|consen 123 CDYAVGLSRSL-EGKIFPSER--PGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAV 199 (507)
T ss_pred HHHhhhhhhhh-CCcccCCCC--CchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHHHH
Confidence 88876544432 222222111 122233567799999999999999999889999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCC
Q 009919 162 FRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVD 239 (522)
Q Consensus 162 ~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daD 239 (522)
.+++.+.|.+..+|++......|..+.++++.+ ++..+.||||..+++.+.+..-.+.-+..|||||+|+.||.+|||
T Consensus 200 tklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqarfgk~llelggnnaiiv~edad 279 (507)
T KOG2453|consen 200 TKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARFGKLLLELGGNNAIIVNEDAD 279 (507)
T ss_pred HHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHHHHHhhhHHHhhcCCceEEEecccc
Confidence 999999999999999999999898899999987 999999999999999999988888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHH
Q 009919 240 VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 319 (522)
Q Consensus 240 l~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~ 319 (522)
|..++...++++...+||+|+..+|++||+++||+.+++|+...+++++|+|.++++-+||+-+++....++..++++.+
T Consensus 280 l~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~ntl~gplht~qav~~f~~~veeak~ 359 (507)
T KOG2453|consen 280 LNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAKA 359 (507)
T ss_pred ceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHH
Q 009919 320 KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 399 (522)
Q Consensus 320 ~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~ 399 (522)
.|+++++||... +++|+|++||+++ ..+|.++..+|.|.|||+|.+|++++||+++-|+.+.||++||||+|...
T Consensus 360 ~ggki~yggkv~----er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~ainnev~qglsssift~n~~n 434 (507)
T KOG2453|consen 360 SGGKIEYGGKVL----ERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQN 434 (507)
T ss_pred cCCeEEECCEee----ccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhheeccccccccchhhhhcCHHH
Confidence 999999999864 4789999999997 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH--HhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 400 AREIAA--QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 400 ~~~~~~--~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
+-+++. ..++|.|.||-+ ++.+...-.|||-|..|-||..|.+..++|.+..+.+++.
T Consensus 435 ifrw~gpkgsdcgivnvnip-tsgaeiggafggek~tgggresgsdswkqymrrstctiny 494 (507)
T KOG2453|consen 435 IFRWMGPKGSDCGIVNVNIP-TSGAEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTINY 494 (507)
T ss_pred HHhhhCCCCCccceEEecCC-CCchhhcccccCccccCCCcccCchHHHHHHhhceeeeec
Confidence 888875 447999999964 4455566899999999999999999999999988776654
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=316.30 Aligned_cols=349 Identities=17% Similarity=0.194 Sum_probs=245.7
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHH---HHHhcCCChhhhhhhHHHHHHHHHHHHHHccccc
Q 009919 16 DERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEI---SSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW 92 (522)
Q Consensus 16 ~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~---~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~ 92 (522)
++.++..+++++.|..-+...|.++++++...+..+.+.+.++ +..+..|+..+..+.| .+. ....+++|
T Consensus 27 ~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~~l~~~l~~------el~-~~~~Ld~w 99 (422)
T cd07080 27 EEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRRENLERILER------ELG-SPGILDEW 99 (422)
T ss_pred HHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHHHHHHHHHH------hcC-CcccccCC
Confidence 4445555555566666666666666666666665555555555 4444444333332111 111 12233334
Q ss_pred cCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhc
Q 009919 93 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 172 (522)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~a 172 (522)
.+ .+...+++++|+||+++|+|||||+ +.+++++.||++||++|+|||+.+|.++.++.+++.+ +
T Consensus 100 ~~----------~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~----~ 164 (422)
T cd07080 100 VP----------PGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLAD----V 164 (422)
T ss_pred cc----------CCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHh----c
Confidence 32 1356788999999999999999999 7999999999999999999999999999999888775 3
Q ss_pred CCCC----CcEeee--cCcc-hhhhhHhcCccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCc-ceEEEcCCC----CH
Q 009919 173 GAPE----NLVDVI--TGFA-ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK-DAFIVCDDV----DV 240 (522)
Q Consensus 173 g~p~----g~v~vv--~g~~-~~~~~L~~~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk-~p~iV~~da----Dl 240 (522)
+|+ +.++++ +|+. +.++.|++.-|.|+||||+++++.|++.++++ +.++|+||| +++|+++++ |+
T Consensus 165 -~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~~~a~~~~dl 241 (422)
T cd07080 165 -DPNHPLTDSISVVYWPGGDAELEERILASADAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSFAVIDREALESEKL 241 (422)
T ss_pred -CCCCcccceEEEEEecCCchHHHHHHHHhCCEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeEEEecHHhhccccH
Confidence 677 788888 4654 47888888339999999999999999998865 579999999 556666668 99
Q ss_pred HHHHHHHHHHHHHcCCCCcccCCeeEEchhh---HHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDI---YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 241 ~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i---~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
+.+++.+++++|.|+||.|+|+++||||+++ +++|.+.|.++++++....|.. ++ +.....++...-..+
T Consensus 242 ~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~------~~-~~~~~~~~~~~r~~~ 314 (422)
T cd07080 242 AEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPAL------SL-SAAESAKIARARLEA 314 (422)
T ss_pred HHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCC------CC-CHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 9999999999999875433321 11 333444443333322
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
...+.+.... ..-.-||+.+-.+. + .....+=.+.|+++++++|++..++. +=-++++|..+.
T Consensus 315 ~~~~~~~~~~------------~~~~~~v~~~~~~~--~-~~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~ 377 (422)
T cd07080 315 EFYELKGGVS------------RDLGWTVIISDEIG--L-EASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPA 377 (422)
T ss_pred HHHHHhcCCC------------CCCCeEEEEeCCCC--c-cCCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChh
Confidence 2222221110 01124555443322 2 12566678899999999999999985 556899999888
Q ss_pred HHHHHHHHHhc-cCCeee
Q 009919 398 HRAREIAAQIQ-CGVAAI 414 (522)
Q Consensus 398 ~~~~~~~~~l~-~G~v~I 414 (522)
+. .++++++. .|.-.|
T Consensus 378 ~~-~~~~~~l~~~Gv~Ri 394 (422)
T cd07080 378 EL-AELADALAAAGVDRI 394 (422)
T ss_pred hH-HHHHHHHHHcCcccc
Confidence 77 77777775 444333
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=288.70 Aligned_cols=391 Identities=21% Similarity=0.220 Sum_probs=308.2
Q ss_pred HHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC----ChhhhhhhH-------HHHHHHH
Q 009919 13 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGK----TMVDASLGE-------IMTTCEK 81 (522)
Q Consensus 13 ~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk----~~~ea~~~E-------i~~~~~~ 81 (522)
.++.+..++|++|......++.++|.+.|..+++.|..+.++|.++..+|.-. ...++.... +...++-
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 35677788999999999999999999999999999999999999988877432 122222221 2222222
Q ss_pred HHHHHH---ccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 82 ITWLLS---EGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 82 l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++..+. ...+.+.... ...+.+.+-.+.|+||+++| |..-...+.....-+|.+||+||+|.+..+.+++
T Consensus 83 l~~Va~L~DPvGev~~~~~-----~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn 155 (417)
T COG0014 83 LRQVAALPDPVGEVIDGWT-----LPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSN 155 (417)
T ss_pred HHHHhcCCCchHhhhcccc-----CCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhH
Confidence 332222 2222222111 12356677889999999999 7777778888899999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCc-chhhhhHhc---CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEE
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS---SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 234 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~-~~~~~~L~~---~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV 234 (522)
..+.+++++.|.++|+|++.||+|+.. .+....|+. .+|.|+..||....+.|.+.+. .||+-.+-|+|.++|
T Consensus 156 ~ai~~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~---vPVi~~~~G~CHiyv 232 (417)
T COG0014 156 AAIVEVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT---VPVIEHGVGNCHIYV 232 (417)
T ss_pred HHHHHHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc---CCEEecCcceEEEEe
Confidence 999999999999999999999999864 355666665 9999999999999999998877 999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i 314 (522)
+.+||++.|.+-++.+|....+- |++.+.++||+.+.++|+..|.+.+... |--... ++. ..+.+
T Consensus 233 d~~ADld~A~~ii~nAKtqrPs~-CNA~EtLLVh~~ia~~fLp~l~~~l~~~--gvelr~--------d~~----~~~~~ 297 (417)
T COG0014 233 DESADLDKALKIIVNAKTQRPSV-CNAAETLLVHRAIAKSFLPKLANALQEA--GVELRG--------DAE----ALALL 297 (417)
T ss_pred cccCCHHHHHHHHHcccCCCCcc-cchHHHHHcCHHHHHHhHHHHHHHHHhc--CeEEEc--------CHH----HHHhc
Confidence 99999999999999999999986 9999999999999999999999988742 111100 111 11111
Q ss_pred HHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEec
Q 009919 315 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 394 (522)
Q Consensus 315 ~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s 394 (522)
.+ .+ .+....=+.+|...+++.|..++++|+||+++|....+++=+|.|
T Consensus 298 ~~---------------------~~----------~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiT 346 (417)
T COG0014 298 PD---------------------AV----------KPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIIT 346 (417)
T ss_pred cc---------------------cC----------CCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceee
Confidence 00 00 111222257899999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCC-CCC-CCCCcchHHHHHhchhceEEEEccc
Q 009919 395 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGV-KDS-GFGRFAGVEGLRACCLVKSVVEDRW 459 (522)
Q Consensus 395 ~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~-~~S-G~G~~~g~~~l~~ft~~k~v~~~~~ 459 (522)
+|.+.+++|...+++..|+||....+.....+.||.. |.| ...+.+|+-||+++|..|.+++...
T Consensus 347 e~~~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G~G 413 (417)
T COG0014 347 EDYANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRGDG 413 (417)
T ss_pred CCHHHHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeCCc
Confidence 9999999999999999999999766665555556553 333 4456779999999999999987653
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-27 Score=224.13 Aligned_cols=382 Identities=19% Similarity=0.253 Sum_probs=280.8
Q ss_pred HHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHh------cCCChhhhhh-------hHHHHHHHH
Q 009919 15 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRD------TGKTMVDASL-------GEIMTTCEK 81 (522)
Q Consensus 15 v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e------~Gk~~~ea~~-------~Ei~~~~~~ 81 (522)
+++..+.||++.+..++++.++|.++|..++++|..+..+|.++...| .|.. +..+ +.+.....-
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~--~sll~RL~l~~~K~~sl~~g 79 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLA--ESLLKRLDLSPGKISSLAAG 79 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCcc--HHHHHHhcCChHHHHHHHHH
Confidence 356678899999999999999999999999999999999888766554 4432 1111 112222222
Q ss_pred HHHHH---HccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 82 ITWLL---SEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 82 l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++..+ +...+.++...+..+ ..-+-.-.|+||.++| |..-.-....-..-|+++||.+++|....+..+.
T Consensus 80 ~~~ia~~edpvGRVl~~~~ladg-----L~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn 152 (433)
T KOG4165|consen 80 LRQIAELEDPVGRVLKKTRLADG-----LELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSN 152 (433)
T ss_pred HHHHHhcccchhhheeeeeccCC-----ceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhH
Confidence 22222 223333332222222 2334455699999999 6655555666667789999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
..+.++++++|...|.|.+.|++|+...|..+.|-- .+|.|+..||...-+.|..... +||..+-.|.+.++|++
T Consensus 153 ~~L~~~v~~al~~~~~~~~aV~LV~sREev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk---IPVLGHA~GichvYvd~ 229 (433)
T KOG4165|consen 153 AALHKLVQEALGTHGGPGKAVQLVTSREEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK---IPVLGHAEGICHVYVDK 229 (433)
T ss_pred HHHHHHHHHHhhhccCchhhhhheecHHHHHHHhhhhhheeEEecCCcHHHHHHHhhccc---CcccccccceeEEEecc
Confidence 999999999999999999999999875555554422 8999999999999888877654 99999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhh-HHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i-~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
|||++.|-+.+..+++.+.. .|+|.+.+++|++. ...|.+.|...++
T Consensus 230 dad~~kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~------------------------------- 277 (433)
T KOG4165|consen 230 DADLDKAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLK------------------------------- 277 (433)
T ss_pred ccCHHHHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHH-------------------------------
Confidence 99999988888888877665 49999999999973 2344443333222
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
.+|.++ ++|.++. .-..| -++...-++.|.-.-.++|-.+++.++||+.+|....+++-+|.|+
T Consensus 278 ---~~gVtl-~agpkl~----~~l~~--------~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe 341 (433)
T KOG4165|consen 278 ---EEGVTL-HAGPKLA----ALLKF--------SPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTE 341 (433)
T ss_pred ---hcCeEE-ecChhHH----hhcCc--------CCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEec
Confidence 134333 3333211 00111 1334455788888888999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCC--CCC--cchHHHHHhchhceEEEEcc
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSG--FGR--FAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG--~G~--~~g~~~l~~ft~~k~v~~~~ 458 (522)
|...+++|...+++..|+.|....+..- +-||=--+-| .++ .+|+-|++..+..|++++..
T Consensus 342 ~~~~Ae~Fl~~VDSa~vf~NASTRFaDG--fRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG~ 406 (433)
T KOG4165|consen 342 NEATAEHFLKHVDSACVFHNASTRFADG--FRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRGK 406 (433)
T ss_pred CHHHHHHHHhccchhheeeccccccccc--ccccccceeeeeccceeccCCccccceeeeeeEEecC
Confidence 9999999999999999999986554432 4453211223 334 45999999999999998865
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.4e-16 Score=162.99 Aligned_cols=280 Identities=19% Similarity=0.213 Sum_probs=192.1
Q ss_pred ceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEeee--cCcc
Q 009919 109 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI--TGFA 186 (522)
Q Consensus 109 ~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag~p~g~v~vv--~g~~ 186 (522)
.+.+..|.|+++.|.|.|-|.. .+..++.+|.+||..|+|+|...+.++..+.+.+.++..+.-+ ...+.++ +|..
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~-~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l-~~~i~v~~~~~~d 158 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLV-GFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPL-ADSIAVVYWPGGD 158 (399)
T ss_pred chhhccCCceEEEEcCCCccch-HHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchh-hhcEEEEEecCCc
Confidence 5678899999999999999986 6667788899999999999999999999988888765211101 2346666 3433
Q ss_pred -hhhhhHhcCccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCee
Q 009919 187 -ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERF 265 (522)
Q Consensus 187 -~~~~~L~~~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v 265 (522)
+..+.+.+..|.|+.+||.++.+.|.+.. +...+.+....-.+-++|..+++++.+++.++.-.+...+|.|.||+.|
T Consensus 159 ~~~~~~~~~~~D~vv~wGgd~ti~~ir~~~-~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~~i 237 (399)
T PF05893_consen 159 EELEEALSQQADAVVAWGGDETIRAIRQPL-PPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQVI 237 (399)
T ss_pred hHHHHHHHHHCCEEEEeCCHHHHHHHHHHc-CCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCeEE
Confidence 44556666999999999999999999833 3335555556666778888889999999999999999999999999999
Q ss_pred EEc---hhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH-----HHHHcCCcEeeccCCCCCCCCC
Q 009919 266 YVH---RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN-----DALDKGAEILARGSFGHLSEGA 337 (522)
Q Consensus 266 ~V~---~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~-----~a~~~Ga~v~~gG~~~~~~~~~ 337 (522)
||. ..-.++|.++|.+++.+...--|... .+......+....+ .+...+.++. ++.
T Consensus 238 fv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~~-------~s~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~-------- 301 (399)
T PF05893_consen 238 FVETGDGDSVEEFAERLAEALERAAERYPRGE-------LSIDEAAAISSLRAEAELRYALDGEYRVW-SSD-------- 301 (399)
T ss_pred EEECCCcccHHHHHHHHHHHHHHHHHhCCCcC-------CCHHHHHHHHHHHHHHHHHHHhcCCccee-ecC--------
Confidence 999 34567888888777765421111110 12222222222222 2333333443 222
Q ss_pred CCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCc-eeEEecCcHHHHHHHHHHh-ccCCeeec
Q 009919 338 VDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL-GCAVFSGSQHRAREIAAQI-QCGVAAIN 415 (522)
Q Consensus 338 ~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL-~a~v~s~d~~~~~~~~~~l-~~G~v~IN 415 (522)
--..||+....+ ......++=.+.|.++++++|++.+++.... + +++++..+ ....+++..+ ..|.-.|=
T Consensus 302 ---~~~~~V~~~~~~---~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~-lQTvgi~~~~-~~~~~~~~~l~~~Gv~Riv 373 (399)
T PF05893_consen 302 ---DNSWTVIVSPEP---PLLPSPLNRTVYVVPVDSLEELVPYLRPKRG-LQTVGIYPWS-ERLEELARALAAAGVDRIV 373 (399)
T ss_pred ---CCCEEEEECCCc---ccccCCCCCEEEEEEcCCHHHHHHHhhhcCC-CeeEEEecCh-hhHHHHHHHHHhcCCeeeC
Confidence 112466654322 2334555678999999999999999998754 4 77776654 4456666644 45644443
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.1e-14 Score=118.85 Aligned_cols=135 Identities=20% Similarity=0.307 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCC
Q 009919 273 ALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 352 (522)
Q Consensus 273 d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~ 352 (522)
....+.|++..+.+++-+...+++|. .+...|+.++|+.- +...|..--.+....++|+.||+|. |+|
T Consensus 9 ksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~------~~~~~r~~yl~~ya~~~f~~~tiLs-vtP 76 (157)
T KOG2449|consen 9 KSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSE------DPLDGRFIYLPGYAEGNFVGPTILS-VTP 76 (157)
T ss_pred hhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCc------CccCCceEEeeccccCCcccceEEE-ecC
Confidence 44566777888888877766677775 56677888888752 2222222122345789999999998 999
Q ss_pred CCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCcc
Q 009919 353 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFAS 419 (522)
Q Consensus 353 ~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~~G~v~IN~~~~ 419 (522)
+|.+..||+||||+..+.-+++||+|.++|+.+||....|||.+.+.++++....++|.+.+|-...
T Consensus 77 ~ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip 143 (157)
T KOG2449|consen 77 NMSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIP 143 (157)
T ss_pred CcceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceecccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999997533
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.8e-10 Score=103.73 Aligned_cols=167 Identities=16% Similarity=0.208 Sum_probs=127.4
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHH
Q 009919 230 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 309 (522)
Q Consensus 230 ~p~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~ 309 (522)
.-+||++|.||+.|+..++.+.-..-| ..+.-.|+|||+++|+|+++++.+++.+... +.+...+.|
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl~~~-----------va~Hpny~r 72 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPLSPQ-----------VANHPNYLR 72 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccCChh-----------hccCcHHHH
Confidence 448999999999999999998766555 5688899999999999999999999876311 112333444
Q ss_pred HHHHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCC-CCc
Q 009919 310 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR-YGL 388 (522)
Q Consensus 310 ~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~-~gL 388 (522)
-.+.++ ..+++++.++.. ..-..-.|.++.|++.+ .+.. --.+|+++.+|++..||+++.+.-. ..-
T Consensus 73 sl~~i~---~l~~~~I~~~~~------~~~~~aSPilV~d~~h~--~fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~ 140 (215)
T PF07368_consen 73 SLKKIK---CLNAKTIVADFE------NVPPPASPILVCDFTHS--YFGD-GPTGVITLHTFRTPKEAIELCAKETLPFD 140 (215)
T ss_pred HHHHHH---hcCCeEEEeccc------CCCCCCCCEEEcCCCHH--HcCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcc
Confidence 444444 468999888542 12234469999887754 2222 4447999999999999999999753 335
Q ss_pred eeEEecCcHHHHHHHHHHhccCCeeecCCcccC
Q 009919 389 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 421 (522)
Q Consensus 389 ~a~v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~ 421 (522)
+.|||++..+.+-+++.++.+..++||+.....
T Consensus 141 SVsiW~ekla~~Yel~~~l~~~~f~iNC~~V~L 173 (215)
T PF07368_consen 141 SVSIWNEKLASAYELAARLPCDTFYINCFNVDL 173 (215)
T ss_pred eEEEeCcHHHHHHHHHHhCCCCEEEEEeccCCc
Confidence 999999999999999999999999999875543
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.32 E-value=3e-06 Score=98.96 Aligned_cols=102 Identities=14% Similarity=0.201 Sum_probs=79.0
Q ss_pred ccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEeeecC
Q 009919 105 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 184 (522)
Q Consensus 105 ~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag~p~g~v~vv~g 184 (522)
+|+++.++.+|+|+++||+||| ...+.++..||++||+||+||++.++. .+ +.+|..+.+.+
T Consensus 1068 TGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~~------~~Lp~~~~~~~-- 1129 (1208)
T PRK11905 1068 TGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------AL------ADLPGLVAARI-- 1129 (1208)
T ss_pred CCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------HH------HhCcccccccc--
Confidence 5799999999999999999999 447889999999999999999998752 11 12555555444
Q ss_pred cchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCC---CceeeeC
Q 009919 185 FAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL---TPVTLEL 226 (522)
Q Consensus 185 ~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~---~pv~lel 226 (522)
..+..+.. .++.|.||||+++.+.+.++.+++- .|++.|.
T Consensus 1130 --~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet 1174 (1208)
T PRK11905 1130 --DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAE 1174 (1208)
T ss_pred --ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecC
Confidence 22334555 6999999999999999999888764 4444444
|
|
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.16 Score=52.40 Aligned_cols=260 Identities=15% Similarity=0.151 Sum_probs=145.8
Q ss_pred cccceEEEeeceEEEEEccC-chhhh-hhhHHHHHHhhcCCEEEE--ecCCCchHHHHHHHHHHHHHHHhcCCCCCcEee
Q 009919 106 HKKAKVEFHPLGVVGAIVSW-NYPFH-NIFNPMLAAVFSGNGIVI--KVSENASWSGCFYFRIIQAALAAVGAPENLVDV 181 (522)
Q Consensus 106 ~~~~~~~~~P~GVv~vi~p~-N~P~~-~~~~~~~~ALaaGN~Vvl--Kps~~~~~~~~~l~~~~~~~l~~ag~p~g~v~v 181 (522)
+.....++.|+-.|++..|. .+|+. +.+...++|-.+|..=|+ -|..........++ +.+.+|..+ ++.
T Consensus 101 gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-----Aa~~~Gv~e-Iy~- 173 (416)
T PRK13770 101 SVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEVLA-----ACYITQVNQ-VFQ- 173 (416)
T ss_pred CcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCCCCHHHHH-----HHHHcCCCe-eec-
Confidence 34556788999999999995 44443 466778899999986544 34432111111111 123466654 222
Q ss_pred ecCcchhhhhHhc------CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcce--EEEcCCCCHHHHHHHHHHHHHH
Q 009919 182 ITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA--FIVCDDVDVPHVAQIAVRAALQ 253 (522)
Q Consensus 182 v~g~~~~~~~L~~------~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p--~iV~~daDl~~aa~~i~~~~~~ 253 (522)
+ |+.+...+|.- ++|+|+=.|..=+..+=......-.+. -+-|.+= +|-|++||.+..|..++..+=+
T Consensus 174 i-GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID---~~AGPSEvlViAD~~Anp~~iAaDLLaQAEH 249 (416)
T PRK13770 174 V-GGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQVGID---QIAGPTEIALIIDETADLDAIVYDVFAQAEH 249 (416)
T ss_pred c-CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCCcCcC---CCCCCceeEEEecCCCCHHHHHHHHHHHhcc
Confidence 2 55565555532 899998777654322111111110111 1123333 3335569999998888766544
Q ss_pred cCCCCcccCCeeEE-chhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCCCC
Q 009919 254 SSGQNCAGAERFYV-HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH 332 (522)
Q Consensus 254 n~Gq~C~a~~~v~V-~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~ 332 (522)
.. .+.-.++. +++..++..+.+.+.+..+. . . +.++.+.+.
T Consensus 250 d~----~a~~iLvT~s~~la~~V~~ev~~ql~~lp----------------r--~----~i~~~al~~------------ 291 (416)
T PRK13770 250 DE----LARTYVISEDAQVLKDLESRIAKALPNVD----------------R--Y----DIVSKSIAN------------ 291 (416)
T ss_pred CC----CCcEEEEeCCHHHHHHHHHHHHHHHHhCC----------------h--H----HHHHHHHHh------------
Confidence 33 22333333 34566666666666555542 0 1 122222211
Q ss_pred CCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhc-cCC
Q 009919 333 LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-CGV 411 (522)
Q Consensus 333 ~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~-~G~ 411 (522)
+| .|+-++|+|||++++|..- +=-.-|.++|. +.+..+++ +|.
T Consensus 292 -----------------------------~g---~ii~v~~~eeai~~~N~~A-PEHLel~~~~~---~~~l~~i~nAGa 335 (416)
T PRK13770 292 -----------------------------QH---YLIHASNFDEACHVMNTIA-PEHASIQTVNP---QPYIEKVKYVGA 335 (416)
T ss_pred -----------------------------CC---EEEEECCHHHHHHHHHhhC-hHhheehhCCH---HHHHhhCCEece
Confidence 11 3445689999999999852 12456788876 44666665 899
Q ss_pred eeecCCcc-------cCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 412 AAINDFAS-------NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 412 v~IN~~~~-------~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
|++..+.. ...++-+|- +|..|+.+.-+.+.|...-++.
T Consensus 336 iFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 381 (416)
T PRK13770 336 LFIGHYSPEVIGDYVAGPSHVLPT-----NRTARFTNGLSVNDFLTRNTVI 381 (416)
T ss_pred eccCCCCchhhhccccCCCCcCCC-----CcceeccCCCcHHHeecceeeE
Confidence 99976522 112344555 5677777777888888766654
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.12 Score=53.38 Aligned_cols=260 Identities=18% Similarity=0.182 Sum_probs=121.5
Q ss_pred cccceEEEeeceEEEEEccC-chhhh-hhhHHHHHHhhcCCEEEE--ecCCCchHHHHHHHHHHHHHHHhcCCCCCcEee
Q 009919 106 HKKAKVEFHPLGVVGAIVSW-NYPFH-NIFNPMLAAVFSGNGIVI--KVSENASWSGCFYFRIIQAALAAVGAPENLVDV 181 (522)
Q Consensus 106 ~~~~~~~~~P~GVv~vi~p~-N~P~~-~~~~~~~~ALaaGN~Vvl--Kps~~~~~~~~~l~~~~~~~l~~ag~p~g~v~v 181 (522)
|.....++.|+--|++..|. .+|+. +.+..++||-.+|..=|+ -|....-.....+ --+.+.+|..+ |-.
T Consensus 97 G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~v----L~Aa~~~Gv~e--vy~ 170 (412)
T PF00815_consen 97 GVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAV----LAAAHLAGVDE--VYK 170 (412)
T ss_dssp TEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHH----HHHHHHTT-SE--EEE
T ss_pred CcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHH----HHHHHHcCCCE--EEe
Confidence 45566788999999999993 34444 466778899999975444 4443311111111 11233577754 222
Q ss_pred ecCcchhhhhHh------cCccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcce--EEEcCCCCHHHHHHHHHHHHHH
Q 009919 182 ITGFAETGEALV------SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA--FIVCDDVDVPHVAQIAVRAALQ 253 (522)
Q Consensus 182 v~g~~~~~~~L~------~~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p--~iV~~daDl~~aa~~i~~~~~~ 253 (522)
+ |+.+...+|. .++|+|+=.|..=+..+=..-...-.+. -+-|.+= +|-|++||.+..|..++..+=+
T Consensus 171 v-GGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V~ID---~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEH 246 (412)
T PF00815_consen 171 V-GGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDVGID---MIAGPSEVLVIADETANPEFVAADLLAQAEH 246 (412)
T ss_dssp ---HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-EES---------EEEEEE-TTS-HHHHHHHHHHHHTT
T ss_pred c-ccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCcccC---CCCCCCceEEEECCCCCHHHHHHHHHHHhcc
Confidence 2 5555555553 2899999888765432111111111111 1233333 3445679999998888776655
Q ss_pred cCCCCcccCCeeEEc-hhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCCCC
Q 009919 254 SSGQNCAGAERFYVH-RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH 332 (522)
Q Consensus 254 n~Gq~C~a~~~v~V~-~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~ 332 (522)
... +.-.++.+ ++..++..+.+.+.+..+. .. +.++.+.+
T Consensus 247 d~~----a~~vLvt~s~~la~~V~~~v~~~l~~l~---------------r~-------~i~~~sl~------------- 287 (412)
T PF00815_consen 247 DPD----AQAVLVTTSEELAEAVEAEVERQLEELP---------------RR-------EIAEKSLE------------- 287 (412)
T ss_dssp -TT-----EEEEEES-HHHHHHHHHHHHHHHTT-T---------------TH-------HHHHHHHT-------------
T ss_pred CCC----CceEEEECCHHHHHHHHHHHHHHHHhCC---------------ch-------HHHHHHHH-------------
Confidence 443 22333333 3455555555555444431 01 12222221
Q ss_pred CCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHh-ccCC
Q 009919 333 LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI-QCGV 411 (522)
Q Consensus 333 ~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l-~~G~ 411 (522)
+| .++.++|++||++++|..- +=-..|.++|. +.++.++ .+|.
T Consensus 288 -----------------------------~g---~ii~~~~l~ea~~~~N~~A-PEHLel~~~~~---~~~~~~i~~AGa 331 (412)
T PF00815_consen 288 -----------------------------NG---AIIVVDSLEEAIELANEYA-PEHLELQVEDP---EELLEKIRNAGA 331 (412)
T ss_dssp -----------------------------T----EEEE-SSHHHHHHHHHHH---SEEEEESTTH---HHHGGG--S-SE
T ss_pred -----------------------------CC---eEEEECCHHHHHHHHHHhh-HHHHHHHHcCH---HHHHHHhhccCh
Confidence 11 3455689999999999852 23577888886 4466666 4899
Q ss_pred eeecCCcc-------cCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 412 AAINDFAS-------NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 412 v~IN~~~~-------~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
|++..+.. ...++-+|- +|..|+.|.-+...|...-++.
T Consensus 332 iFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 377 (412)
T PF00815_consen 332 IFLGEYTPEALGDYAAGPNHVLPT-----GGTARFSSGLSVDDFLKRISVQ 377 (412)
T ss_dssp EEESTT--HHHHHHTSSS-----------TTGGGT---S-GGGGEEEEEEE
T ss_pred hhcCCCCCHHHhhhccCCCccCCC-----CccccccCCCcHHHccceeeEE
Confidence 99997521 223455676 4667788888888988766654
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.49 Score=49.11 Aligned_cols=259 Identities=17% Similarity=0.167 Sum_probs=145.8
Q ss_pred cccceEEEeeceEEEEEccC-chhhh-hhhHHHHHHhhcCCEEEE--ecCCCchHHHHHHHHHHHHHHHhcCCCCCcEee
Q 009919 106 HKKAKVEFHPLGVVGAIVSW-NYPFH-NIFNPMLAAVFSGNGIVI--KVSENASWSGCFYFRIIQAALAAVGAPENLVDV 181 (522)
Q Consensus 106 ~~~~~~~~~P~GVv~vi~p~-N~P~~-~~~~~~~~ALaaGN~Vvl--Kps~~~~~~~~~l~~~~~~~l~~ag~p~g~v~v 181 (522)
|.....++.|+--|++..|. .+|+. +.+...++|-.+|..=|+ -|....-.....++ +.+.+|..+ ++.
T Consensus 106 Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-----Aa~~~Gv~e-Iy~- 178 (426)
T PRK12447 106 GVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-----AMHLAGADE-IYV- 178 (426)
T ss_pred CeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-----HHHHcCCCe-ehh-
Confidence 34556788999999999995 44443 466778899999985444 44432111111122 123466654 222
Q ss_pred ecCcchhhhhHhc------CccEEEEeCCHHHHHHHHHHHhcCCCceeee-CCCcceE--EEcCCCCHHHHHHHHHHHHH
Q 009919 182 ITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE-LGGKDAF--IVCDDVDVPHVAQIAVRAAL 252 (522)
Q Consensus 182 v~g~~~~~~~L~~------~vd~V~ftGS~~~g~~v~~~aa~~~~pv~le-lgGk~p~--iV~~daDl~~aa~~i~~~~~ 252 (522)
-|+.+...+|.- ++|+|+=.|..=+..+=..... .|-.. +-|.+=+ |-|++||.+..|..++..+=
T Consensus 179 -vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAE 253 (426)
T PRK12447 179 -LGGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFG----RVGIDLFAGPTETLVIADDTADPELVATDLLGQAE 253 (426)
T ss_pred -cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC----ccCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhc
Confidence 255565555532 8999987776544221111111 11111 1333333 33455999998888876654
Q ss_pred HcCCCCcccCCeeEE-chhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCCC
Q 009919 253 QSSGQNCAGAERFYV-HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 331 (522)
Q Consensus 253 ~n~Gq~C~a~~~v~V-~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~ 331 (522)
+... +.-.++. ++++.++..+.+.+.+..+. + . +.++.+.+.
T Consensus 254 Hd~~----a~~iLvT~s~~la~~V~~~v~~ql~~l~----------------r--~----~i~~~sl~~----------- 296 (426)
T PRK12447 254 HGPN----SPAVLITTSRKLAEEVLAEIERLLAILP----------------T--A----DVASAAWRD----------- 296 (426)
T ss_pred cCCC----CceEEEECCHHHHHHHHHHHHHHHHhCC----------------H--H----HHHHHHHHh-----------
Confidence 4332 2233333 34555666666666555441 1 1 122222211
Q ss_pred CCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhc-cC
Q 009919 332 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-CG 410 (522)
Q Consensus 332 ~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~-~G 410 (522)
+| .|+-++|++||++++|..- +=-..|.++|. +.+..+++ +|
T Consensus 297 ------------------------------~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~~---~~~l~~i~nAG 339 (426)
T PRK12447 297 ------------------------------YG---EVILCDDLEEMVAEADRYA-SEHVQVMTEDP---DWFLENMTNYG 339 (426)
T ss_pred ------------------------------CC---EEEEECCHHHHHHHHHhhC-hHheeehhCCH---HHHHhhcCccc
Confidence 11 2345689999999999852 22456888876 44666664 89
Q ss_pred CeeecCCcc-------cCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 411 VAAINDFAS-------NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 411 ~v~IN~~~~-------~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
.|++..+.. ...++-+|- +|..++.+.-+.+.|...-++.
T Consensus 340 aiFlG~~sp~a~GDY~aGpNHvLPT-----~G~Ar~~sgLsv~~FlK~~s~~ 386 (426)
T PRK12447 340 ALFLGERTNVAYGDKVIGTNHVLPT-----SGAARYTGGLWVGKFLKTVTYQ 386 (426)
T ss_pred eeccCCCCchhhhhcccCCCcccCC-----CcceeecCCCcHHHhccceeEE
Confidence 999976422 112334554 5677888888888888765554
|
|
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.72 Score=47.96 Aligned_cols=258 Identities=18% Similarity=0.227 Sum_probs=145.4
Q ss_pred cccceEEEeeceEEEEEccC-c--hhhhhhhHHHHHHhhcCCEEE--EecCCCchHHHHHHHHHHHHHHHhcCCCCCcEe
Q 009919 106 HKKAKVEFHPLGVVGAIVSW-N--YPFHNIFNPMLAAVFSGNGIV--IKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180 (522)
Q Consensus 106 ~~~~~~~~~P~GVv~vi~p~-N--~P~~~~~~~~~~ALaaGN~Vv--lKps~~~~~~~~~l~~~~~~~l~~ag~p~g~v~ 180 (522)
|.....++.|+-.|++..|+ . ||- +.+...++|-.+|..=| .-|..........++ +.+.+|..+ ++.
T Consensus 111 Gv~~g~~~~Pi~~vG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPp~~g~i~p~vL~-----AA~~~Gv~e-Iy~ 183 (425)
T PRK00877 111 GVRLGQRWRPIERVGLYVPGGKAAYPS-SVLMNAIPAKVAGVKEIVMVTPPPDGEINPAILA-----AAALAGVDE-VYK 183 (425)
T ss_pred CeEEEEEEEehHHeEEEccCCCCCchH-HHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-----HHHHcCCCe-eec
Confidence 44556788999999999996 3 443 46677889999998544 444431111111121 223467755 222
Q ss_pred eecCcchhhhhHhc------CccEEEEeCCHHHHHHHHHHHhcCCCceee-eCCCcceEEE--cCCCCHHHHHHHHHHHH
Q 009919 181 VITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTL-ELGGKDAFIV--CDDVDVPHVAQIAVRAA 251 (522)
Q Consensus 181 vv~g~~~~~~~L~~------~vd~V~ftGS~~~g~~v~~~aa~~~~pv~l-elgGk~p~iV--~~daDl~~aa~~i~~~~ 251 (522)
-|+.+...+|.- ++|+|+=.|..=+.. ++..... .|-. -+-|.+=++| |++||.+..|..++..+
T Consensus 184 --vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~g--~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQA 257 (425)
T PRK00877 184 --VGGAQAIAALAYGTESIPKVDKIVGPGNIYVTA--AKRLVFG--VVGIDMIAGPSEILVIADETADPDFVAADLLSQA 257 (425)
T ss_pred --cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHH--HHHHHcC--CcCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHh
Confidence 255566566642 899998777654321 1111100 1111 1133333333 44599999998887665
Q ss_pred HHcCCCCcccCCeeEEc-hhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCC
Q 009919 252 LQSSGQNCAGAERFYVH-RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 330 (522)
Q Consensus 252 ~~n~Gq~C~a~~~v~V~-~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~ 330 (522)
=+... +.-.++.+ ++..++..+.+.+.+..+. . . +.++.+.+.
T Consensus 258 EHd~~----a~aiLvT~s~~la~~V~~~v~~ql~~l~----------------r--~----~ia~~sl~~---------- 301 (425)
T PRK00877 258 EHDPD----AQSILVTTSEELAEAVAAEVERQLATLP----------------R--A----EIARASLEG---------- 301 (425)
T ss_pred ccCCC----CcEEEEECCHHHHHHHHHHHHHHHHhCC----------------h--H----HHHHHHHHh----------
Confidence 44332 33333333 3555665555555554431 0 1 122222211
Q ss_pred CCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHh-cc
Q 009919 331 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI-QC 409 (522)
Q Consensus 331 ~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l-~~ 409 (522)
+| .|+-++|+|||++++|..- +=-..|.++|.. .++.++ .+
T Consensus 302 -------------------------------~g---~iivv~~leeai~~~N~~A-PEHLel~~~~p~---~~l~~I~nA 343 (425)
T PRK00877 302 -------------------------------QG---AIILVDDLEEAIELSNAYA-PEHLEIQTEDPR---ALLDRIRNA 343 (425)
T ss_pred -------------------------------CC---EEEEECCHHHHHHHHHhhC-hHheeehhCCHH---HHHhhcCcc
Confidence 11 2345689999999999852 234568888864 456666 48
Q ss_pred CCeeecCCcc-------cCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 410 GVAAINDFAS-------NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 410 G~v~IN~~~~-------~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
|.|++..+.. ...++-+|- +|..|+.+.-+.+.|...-++.
T Consensus 344 GaiFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsV~~F~K~~s~~ 391 (425)
T PRK00877 344 GAIFLGPYTPESLGDYAAGPNHVLPT-----SGTARFSSGLSVYDFLKRSSVI 391 (425)
T ss_pred ceeccCCCCchhhhhcccCCCcccCC-----CcceeecCCccHHHhccceeEE
Confidence 9999987522 112334554 5678888888889988766654
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.35 Score=49.63 Aligned_cols=259 Identities=17% Similarity=0.192 Sum_probs=146.5
Q ss_pred cccceEEEeeceEEEEEccC-chhhh-hhhHHHHHHhhcCCEEEE--ecCCC-chHHHHHHHHHHHHHHHhcCCCCCcEe
Q 009919 106 HKKAKVEFHPLGVVGAIVSW-NYPFH-NIFNPMLAAVFSGNGIVI--KVSEN-ASWSGCFYFRIIQAALAAVGAPENLVD 180 (522)
Q Consensus 106 ~~~~~~~~~P~GVv~vi~p~-N~P~~-~~~~~~~~ALaaGN~Vvl--Kps~~-~~~~~~~l~~~~~~~l~~ag~p~g~v~ 180 (522)
|.....++.|+.-|++..|+ .+|+. +.+...++|-.+|..=|+ -|... .......++ +.+.+|..+ ++.
T Consensus 79 Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-----AA~~~Gv~e-Iy~ 152 (393)
T TIGR00069 79 GVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLA-----AAKLAGVDE-VYK 152 (393)
T ss_pred CeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHH-----HHHHcCCCe-ehh
Confidence 45566788999999999996 33333 466777899999985444 44421 111111122 123467655 121
Q ss_pred eecCcchhhhhHhc------CccEEEEeCCHHHHHHHHHHHhcCCCceeee-CCCcceE--EEcCCCCHHHHHHHHHHHH
Q 009919 181 VITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE-LGGKDAF--IVCDDVDVPHVAQIAVRAA 251 (522)
Q Consensus 181 vv~g~~~~~~~L~~------~vd~V~ftGS~~~g~~v~~~aa~~~~pv~le-lgGk~p~--iV~~daDl~~aa~~i~~~~ 251 (522)
-|+.+...+|.- ++|+|+=.|..=+..+ +..... .|-.. +-|.+=+ |-|++||.+..|..++..+
T Consensus 153 --vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~A--K~~v~g--~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQA 226 (393)
T TIGR00069 153 --VGGAQAIAALAYGTETVPKVDKIVGPGNIYVTAA--KKLVFG--DVGIDMPAGPSEVLVIADETANPEFVAADLLSQA 226 (393)
T ss_pred --cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHhcC--ccCcCCCCCCceEEEEeCCCCCHHHHHHHHHHHh
Confidence 255565555532 8999987776544221 111101 11111 1333333 3345599999888887665
Q ss_pred HHcCCCCcccCCeeEEc-hhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCC
Q 009919 252 LQSSGQNCAGAERFYVH-RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 330 (522)
Q Consensus 252 ~~n~Gq~C~a~~~v~V~-~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~ 330 (522)
=+.. .+.-.++.+ ++..++..+.+.+.+..+. .. +..+++.+.
T Consensus 227 EHd~----~a~~iLvT~s~~la~~V~~~v~~ql~~l~------------------r~----~i~~~al~~---------- 270 (393)
T TIGR00069 227 EHDP----DAQAILVTTSEELAEAVQEEIERQLATLP------------------RR----EIARKSLED---------- 270 (393)
T ss_pred ccCC----CCcEEEEECCHHHHHHHHHHHHHHHHhCC------------------hH----HHHHHHHHh----------
Confidence 4433 233333333 3566666666666665542 01 122222211
Q ss_pred CCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhc-c
Q 009919 331 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-C 409 (522)
Q Consensus 331 ~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~-~ 409 (522)
+| .|+.++|++||++++|..- +=-.-|.++|. +.+..+++ +
T Consensus 271 -------------------------------~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p---~~~l~~I~nA 312 (393)
T TIGR00069 271 -------------------------------NG---AIILVDDLEEAIEISNDYA-PEHLELQTKNP---EELLPKIRNA 312 (393)
T ss_pred -------------------------------CC---EEEEECCHHHHHHHHHhhC-hHhheehhCCH---HHHHhhcCcc
Confidence 11 2345689999999999852 22456777776 44666664 8
Q ss_pred CCeeecCCcc-------cCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 410 GVAAINDFAS-------NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 410 G~v~IN~~~~-------~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
|.|++..+.. ...++-+|- +|.+|+.+.-+.+.|...-++.
T Consensus 313 GaiFlG~~tp~a~GDY~aG~NHvLPT-----~G~Ar~~sgL~v~~F~K~~s~~ 360 (393)
T TIGR00069 313 GSIFLGPYTPEAAGDYAAGPNHVLPT-----GGTARFYSGLSVLDFLKRITVQ 360 (393)
T ss_pred ceeccCCCCchhhhhccCCCCcccCC-----CcceeecCCccHHHhccceeEE
Confidence 9999987522 112334554 5677888888888888766654
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.85 Score=47.47 Aligned_cols=259 Identities=17% Similarity=0.153 Sum_probs=144.9
Q ss_pred cccceEEEeeceEEEEEccC-chhhh-hhhHHHHHHhhcCCEEE--EecCCCc-hHHHHHHHHHHHHHHHhcCCCCCcEe
Q 009919 106 HKKAKVEFHPLGVVGAIVSW-NYPFH-NIFNPMLAAVFSGNGIV--IKVSENA-SWSGCFYFRIIQAALAAVGAPENLVD 180 (522)
Q Consensus 106 ~~~~~~~~~P~GVv~vi~p~-N~P~~-~~~~~~~~ALaaGN~Vv--lKps~~~-~~~~~~l~~~~~~~l~~ag~p~g~v~ 180 (522)
|.....++.|+.-|++..|+ .+|+. +.+..+++|-.+|..=| .-|.... ......++ +.+.+|..+ ++.
T Consensus 111 Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-----AA~~~Gv~e-Iy~ 184 (431)
T PLN02926 111 GVRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLY-----CAKKAGVTH-ILK 184 (431)
T ss_pred CeEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEECCCcCCCCCHHHHH-----HHHHcCCCe-eec
Confidence 44556788999999999996 33333 46677889999998543 4454321 11111122 123467755 222
Q ss_pred eecCcchhhhhHhc------CccEEEEeCCHHHHHHHHHHHhcCCCc--eeee-CCCcceEEE--cCCCCHHHHHHHHHH
Q 009919 181 VITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTP--VTLE-LGGKDAFIV--CDDVDVPHVAQIAVR 249 (522)
Q Consensus 181 vv~g~~~~~~~L~~------~vd~V~ftGS~~~g~~v~~~aa~~~~p--v~le-lgGk~p~iV--~~daDl~~aa~~i~~ 249 (522)
-|+.+...+|.- ++|+|+=.|..=+..+=..... .+ |-.. +-|.+=++| |++||.+..|..++.
T Consensus 185 --vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~G---~~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLa 259 (431)
T PLN02926 185 --AGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQN---SEAMVSIDMPAGPSEVLVIADKTANPVHVAADLLS 259 (431)
T ss_pred --cCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhhC---CCCccccCCCCCCceeEEEeCCCCCHHHHHHHHHH
Confidence 255565555532 8999987776644221111111 10 1111 133333333 455999998888876
Q ss_pred HHHHcCCCCcccCCeeEEch-hhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeecc
Q 009919 250 AALQSSGQNCAGAERFYVHR-DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 328 (522)
Q Consensus 250 ~~~~n~Gq~C~a~~~v~V~~-~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG 328 (522)
.+=+... +.-.++.+. +..++..+.+.+.++.+. + .+..+.+.+.
T Consensus 260 QAEHdp~----a~aiLvT~s~~la~~V~~~v~~ql~~l~----------------r------~~i~~~sl~~-------- 305 (431)
T PLN02926 260 QAEHGPD----SQVVLVAVGDVDLDAIEEEVEKQCQSLP----------------R------GEIASKALGH-------- 305 (431)
T ss_pred HhccCCC----CcEEEEECCHHHHHHHHHHHHHHHHhCC----------------h------HHHHHHHHHC--------
Confidence 6554332 333333332 455555555555554431 0 0122222111
Q ss_pred CCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhc
Q 009919 329 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 408 (522)
Q Consensus 329 ~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~ 408 (522)
-.|+.++|++||++++|..- +=-..|.++|. +.+..+++
T Consensus 306 -------------------------------------g~iivv~~l~ea~~~~N~~A-PEHLei~~~~~---~~~l~~i~ 344 (431)
T PLN02926 306 -------------------------------------SFIVVARDMAEAISFSNLYA-PEHLIVNVEDA---ESWLDKID 344 (431)
T ss_pred -------------------------------------CEEEEECCHHHHHHHHHhhC-hHhheehhcCH---HHHHhhcC
Confidence 13455689999999999852 22456888876 44666664
Q ss_pred -cCCeeecCCcc-------cCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 409 -CGVAAINDFAS-------NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 409 -~G~v~IN~~~~-------~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
+|.|++..+.. ...++-+|- +|.+|+.|.-+.+.|...-++.
T Consensus 345 nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 394 (431)
T PLN02926 345 NAGSVFLGRWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 394 (431)
T ss_pred ccceeccCCCCchhhhccccCcCcccCC-----CcceeecCCCcHHHhcceeeEE
Confidence 89999976522 112334554 5677888888888988766554
|
|
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.48 E-value=1.1 Score=46.35 Aligned_cols=260 Identities=17% Similarity=0.203 Sum_probs=143.6
Q ss_pred ccccceEEEeeceEEEEEcc---CchhhhhhhHHHHHHhhcCCEE--EEecCCCchHHHHHHHHHHHHHHHhcCCCCCcE
Q 009919 105 IHKKAKVEFHPLGVVGAIVS---WNYPFHNIFNPMLAAVFSGNGI--VIKVSENASWSGCFYFRIIQAALAAVGAPENLV 179 (522)
Q Consensus 105 ~~~~~~~~~~P~GVv~vi~p---~N~P~~~~~~~~~~ALaaGN~V--vlKps~~~~~~~~~l~~~~~~~l~~ag~p~g~v 179 (522)
.|.....++.|+--|++..| .-||- +.+...+||-.+|+.= +.-|.+..-.....++ +...+|..+ ++
T Consensus 106 ~Gv~~g~~~~Pi~~VGlYVPGG~A~ypS-tvLM~avPAkvAGv~~Iv~~tPp~~~gv~p~iL~-----AA~~~Gv~e-Iy 178 (425)
T COG0141 106 PGVVLGQRWRPIERVGLYVPGGKAAYPS-TVLMNAVPAKVAGVEEIVVVTPPPKDGVNPEILA-----AARLAGVDE-VY 178 (425)
T ss_pred CCcEEEEEEEEhhheEEEccCCCcCChH-HHHHhhccHhhcCCceEEEECCCCCCCCCHHHHH-----HHHHhCcHH-HH
Confidence 35566788899999999999 45554 4566778999999854 4445553211111111 122356544 22
Q ss_pred eeecCcchhhhhHhc------CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEE-cCCCCHHHHHHHHHHHHH
Q 009919 180 DVITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV-CDDVDVPHVAQIAVRAAL 252 (522)
Q Consensus 180 ~vv~g~~~~~~~L~~------~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV-~~daDl~~aa~~i~~~~~ 252 (522)
+ + |+.+...+|.- .+|+|+=.|..=+..+ +.......-+=+..|--.-+|| |+++|.+..|..++..+=
T Consensus 179 ~-v-GGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaA--Kr~v~g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQAE 254 (425)
T COG0141 179 K-V-GGAQAIAALAYGTETVPKVDKIVGPGNAYVTAA--KRLVSGVVGIDMIAGPSEVLVIADETANPDFVAADLLSQAE 254 (425)
T ss_pred H-c-cCHHHHHHHHccCCcCCccCeeeCCCcHHHHHH--HHHhhCCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhh
Confidence 2 1 55565555642 8999987777644221 1111111111122222222333 455999998888776554
Q ss_pred HcCCCCcccCCeeEEch-hhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCCC
Q 009919 253 QSSGQNCAGAERFYVHR-DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 331 (522)
Q Consensus 253 ~n~Gq~C~a~~~v~V~~-~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~ 331 (522)
+. -.|...++.+. +..++..+.+.+.+..+. + .+.+.+.+. +.|
T Consensus 255 Hd----~~a~aiLvT~s~~la~~v~~~v~~~l~~l~----------------~--~ei~~~~l~---~~g---------- 299 (425)
T COG0141 255 HD----PDAQAILVTDSEELAEAVEAAVERQLETLP----------------R--AEIARKALE---NYG---------- 299 (425)
T ss_pred cC----CCceEEEEeCcHHHHHHHHHHHHHHHHhcc----------------H--HHHHHHHHH---hCC----------
Confidence 43 33334444442 444555555555444431 1 112222111 011
Q ss_pred CCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhc-cC
Q 009919 332 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-CG 410 (522)
Q Consensus 332 ~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~-~G 410 (522)
.|+-++|++||++++|..- +--.-|.++|.. .++.+++ +|
T Consensus 300 -----------------------------------~iilv~~l~ea~~~~N~~A-PEHLei~~~~p~---~~l~~I~nAG 340 (425)
T COG0141 300 -----------------------------------AIILVDDLDEAVEISNEYA-PEHLELQTENPR---ELLGKIRNAG 340 (425)
T ss_pred -----------------------------------eEEEECCHHHHHHHHHhhC-hHhhhhhhcCHH---HHHHHhcccc
Confidence 3455689999999999752 235677888764 4666664 89
Q ss_pred CeeecCCccc-------CCCCCCCccCCCCCCCCCcchHHHHHhchhceEE
Q 009919 411 VAAINDFASN-------YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454 (522)
Q Consensus 411 ~v~IN~~~~~-------~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v 454 (522)
.|+++.+..- ..++-+|- +|+-|+.+.-++..|...-++
T Consensus 341 sIFlG~~sPe~~GDY~aG~NHVLPT-----~g~AR~~s~L~v~dF~K~~tv 386 (425)
T COG0141 341 SIFLGHYSPESLGDYAAGPNHVLPT-----SGTARFSSGLSVYDFLKRSTV 386 (425)
T ss_pred eeeecCCCCccccccccCCCccCCC-----CccchhcCCccHHHhhhHHHH
Confidence 9999986221 11333443 566777777777887765443
|
|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=96.11 E-value=2 Score=44.27 Aligned_cols=260 Identities=17% Similarity=0.180 Sum_probs=144.3
Q ss_pred cccceEEEeeceEEEEEccCc-hhhh-hhhHHHHHHhhcCCEEE--EecCCCc-hHHHHHHHHHHHHHHHhcCCCCCcEe
Q 009919 106 HKKAKVEFHPLGVVGAIVSWN-YPFH-NIFNPMLAAVFSGNGIV--IKVSENA-SWSGCFYFRIIQAALAAVGAPENLVD 180 (522)
Q Consensus 106 ~~~~~~~~~P~GVv~vi~p~N-~P~~-~~~~~~~~ALaaGN~Vv--lKps~~~-~~~~~~l~~~~~~~l~~ag~p~g~v~ 180 (522)
|.....++.|+-.|++..|.- +|+. +.+...++|-.+|..=| .-|.... ......+. +.+.+|..+ ++.
T Consensus 83 G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-----aa~~~Gv~e-iy~ 156 (390)
T cd06572 83 GVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILA-----AAKLAGVDE-IYK 156 (390)
T ss_pred CcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHH-----HHHHcCCcE-Eec
Confidence 556678889999999999964 4444 46677789999998544 4444321 01111111 122466654 222
Q ss_pred eecCcchhhhhHhc------CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcce--EEEcCCCCHHHHHHHHHHHHH
Q 009919 181 VITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA--FIVCDDVDVPHVAQIAVRAAL 252 (522)
Q Consensus 181 vv~g~~~~~~~L~~------~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p--~iV~~daDl~~aa~~i~~~~~ 252 (522)
-|+.+...+|.- ++|+|+=.|..=+.. ++.......-+= -+-|.+= +|-|++||.+..|..++..+=
T Consensus 157 --vGGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~--AK~~v~g~V~ID-~~AGPSEvlIiAD~~A~p~~vAaDLLaQAE 231 (390)
T cd06572 157 --VGGAQAIAALAYGTETIPKVDKIVGPGNIYVTA--AKRLVSGDVGID-MPAGPSEVLVIADETANPEFVAADLLSQAE 231 (390)
T ss_pred --cCCHHHHHHHHcCCcCCCCCCEeeCCchHHHHH--HHHHhcCCcCcc-CCCCCceEEEEeCCCCCHHHHHHHHHhhhc
Confidence 255565555532 799988777554322 111110101011 1123333 333455999998888876544
Q ss_pred HcCCCCcccCCeeEEc-hhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCCC
Q 009919 253 QSSGQNCAGAERFYVH-RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 331 (522)
Q Consensus 253 ~n~Gq~C~a~~~v~V~-~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~ 331 (522)
+.. .+.-.++.+ ++..++..+.+.+.++.+. .. + .++.+..+
T Consensus 232 H~~----~a~aiLvT~s~~la~~V~~~v~~ql~~l~---------------r~---~----~~~~~~~~----------- 274 (390)
T cd06572 232 HDP----DSQAILVTTSEELAEAVEEEVERQLAELP---------------RR---E----IAAKSLLD----------- 274 (390)
T ss_pred cCC----CCeEEEEECCHHHHHHHHHHHHHHHHhCC---------------cH---H----HHHHHHHh-----------
Confidence 432 233333333 3555666666655555442 00 1 11111110
Q ss_pred CCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHh-ccC
Q 009919 332 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI-QCG 410 (522)
Q Consensus 332 ~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l-~~G 410 (522)
+| .|+.++|++||++++|..- +=-.-|.++|... +..++ .+|
T Consensus 275 ------------------------------~g---~ii~~~~~~eai~~~N~~A-PEHLel~~~~~~~---~l~~i~nAG 317 (390)
T cd06572 275 ------------------------------YG---AIILVDDLEEAIELANEYA-PEHLELQTEDPEE---LLEKIRNAG 317 (390)
T ss_pred ------------------------------CC---EEEEECCHHHHHHHHHhhc-hhhheeHhcCHHH---HHhhCccce
Confidence 11 3455689999999999752 2356788887644 56666 489
Q ss_pred CeeecCCcc-------cCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 411 VAAINDFAS-------NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 411 ~v~IN~~~~-------~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
.|++..+.. ...++-+|. +|..|+.+..+.+.|...-++.
T Consensus 318 siFlG~~tp~a~GDY~aGpNHvLPT-----~G~Ar~~sgL~v~~F~K~~s~~ 364 (390)
T cd06572 318 SIFLGPYTPEALGDYAAGPNHVLPT-----GGTARFYSGLSVDDFLKRITVQ 364 (390)
T ss_pred EEeecCCCchhhhccccCCCCccCC-----CcceeecCCCCHHHheecceeE
Confidence 999987522 122445665 4567777777788888766654
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.02 E-value=2.1 Score=43.64 Aligned_cols=249 Identities=15% Similarity=0.120 Sum_probs=133.6
Q ss_pred cccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEeeecCc
Q 009919 106 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 185 (522)
Q Consensus 106 ~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag~p~g~v~vv~g~ 185 (522)
|.....++.|+-.|++..|.-||- +.+...++|-.+|..=|+-.+|-.......+. +.+.+|..+ +-- -|+
T Consensus 84 Gv~~g~~~~Pi~rvG~YVPa~~pS-tvLM~~iPAkvAGV~~Iv~~TPp~~i~p~vL~-----aa~~~Gv~e--Iy~-vGG 154 (368)
T PRK13769 84 GVLRSVFWKPVRRAALYVPARYVS-TLVMLAVPARAAGVEEIYVVTPPRGVTGELLA-----VAKELGVKG--VLA-IGG 154 (368)
T ss_pred CeEEEEEEeeeeeeEEEeccchHH-HHHHhhccHhhcCCCeEEEeCCCCCCCHHHHH-----HHHHcCCCe--eec-ccC
Confidence 455667889999999999965653 56677889999998655443331111111122 223466654 211 255
Q ss_pred chhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCcccCC
Q 009919 186 AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE 263 (522)
Q Consensus 186 ~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~ 263 (522)
.+...++.. ++|+|+=.|..=+..+=...... .-+=+--|--.-+|+.+++|.+..|..++..+=+.. .+ +
T Consensus 155 AQAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~g~--V~ID~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~~----~a-~ 227 (368)
T PRK13769 155 PHGLAYAVFHMGVDMVAGPGGLYVQAAKYVLSQY--VGIDGIEGPTELVVYAEGVPPEVAVRGALAQLEHGP----TS-F 227 (368)
T ss_pred HHHHHHHhcCCCcCEEECCCcHHHHHHHHHHhCC--cCCCCcCCCcceEEEcCCCCHHHHHHHHHHHhhcCC----CC-c
Confidence 555556655 89998877766442211111111 111111122333555556888887777765543322 22 3
Q ss_pred eeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCCCCCCCCCCCcccc
Q 009919 264 RFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 343 (522)
Q Consensus 264 ~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~ 343 (522)
.++|..+ +++.+++.+++.+. +.. . . +.
T Consensus 228 ~iLvT~s--~~la~~V~~~v~~~---------------------------~~~-----~------~---------~~--- 255 (368)
T PRK13769 228 AYLLSTD--AELLKAAEEIYRRE---------------------------RTS-----S------M---------GP--- 255 (368)
T ss_pred EEEEECC--HHHHHHHHHHHHHH---------------------------HHh-----c------C---------CC---
Confidence 3444333 23333443333210 000 0 0 00
Q ss_pred cEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHh-ccCCeeecCCcc---
Q 009919 344 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI-QCGVAAINDFAS--- 419 (522)
Q Consensus 344 Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l-~~G~v~IN~~~~--- 419 (522)
..|+-++|++||++++|..-.= -..|.+. +.+..++ .+|.|+++.+..
T Consensus 256 ----------------------~~iivv~~leeai~~~N~~APE-HLel~~~-----~~~~~~i~nAGsiFl~~p~a~GD 307 (368)
T PRK13769 256 ----------------------LEVRKVAGVEEAVRFIDEIAPE-HLEVWGR-----REVAYRVRNVGAVSVNMPSPYLD 307 (368)
T ss_pred ----------------------CeEEEECCHHHHHHHHHhhChH-heEeeCc-----HHHHhhCCccCChhcCCchhhhc
Confidence 2567789999999999985211 2333442 2244556 489999954311
Q ss_pred --cCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 420 --NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 420 --~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
...++-+|- +|.+|+.|.-+...|...-++.
T Consensus 308 Y~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~t~~ 340 (368)
T PRK13769 308 YVAGISHVLPT-----GGTARWRGIITPLTFMKPIGVA 340 (368)
T ss_pred cccCCCCcCCC-----CcceeccCCCcHHHcccceeEE
Confidence 112334554 5677888888888887665543
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.061 Score=63.83 Aligned_cols=100 Identities=12% Similarity=0.156 Sum_probs=73.6
Q ss_pred ccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEeeecC
Q 009919 105 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 184 (522)
Q Consensus 105 ~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag~p~g~v~vv~g 184 (522)
+|+++.+...|.|+|+|+++-.- ..+.++..+|++||.||+..++.. . +++ +++|+.+.+.+.-
T Consensus 1177 TGE~N~l~l~pRg~vLcl~~~~~---~~~~Ql~Aala~Gn~~v~~~~~~~---~----~~~------~~Lp~~v~~~v~~ 1240 (1318)
T PRK11809 1177 TGERNTYTLLPRERVLCLADTEQ---DALTQLAAVLAVGSQALWPDDALH---R----ALV------AALPAAVQARIQL 1240 (1318)
T ss_pred CCCcceeeccCCCcEEEeCCCHH---HHHHHHHHHHHhCCEEEEeCCchh---H----HHH------HhccHHHHhHhhh
Confidence 57999999999999999987333 578899999999999998755432 1 111 3478887776532
Q ss_pred cchhhhhHhc-CccEEEEeCCHHHHHHHHHHHhcCCCce
Q 009919 185 FAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPV 222 (522)
Q Consensus 185 ~~~~~~~L~~-~vd~V~ftGS~~~g~~v~~~aa~~~~pv 222 (522)
. ....+.. .++.|.|.|.....+.+.++.+++.-|+
T Consensus 1241 ~--~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaI 1277 (1318)
T PRK11809 1241 A--KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPI 1277 (1318)
T ss_pred c--cccccccCCccEEEEeCCHHHHHHHHHHHhcCCCCe
Confidence 1 1122223 7999999999999999998888775443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 522 | ||||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 5e-57 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 2e-55 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 1e-54 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 1e-54 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 5e-54 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 8e-54 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 7e-53 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 1e-52 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 8e-52 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 4e-51 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-50 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-50 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-50 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 1e-50 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 7e-50 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 1e-49 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-49 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-49 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 2e-49 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 5e-49 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 7e-49 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 1e-48 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 1e-48 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 1e-48 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 2e-48 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 3e-48 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 4e-48 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 6e-48 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 1e-47 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 2e-47 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 2e-47 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 2e-47 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 5e-47 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 7e-47 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 1e-46 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 2e-46 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 2e-46 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 2e-45 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 2e-45 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 5e-45 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 7e-45 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 8e-45 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 1e-44 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 1e-44 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 1e-44 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 2e-44 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 3e-44 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 1e-43 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 2e-43 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 3e-43 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 1e-42 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 3e-42 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 4e-42 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 3e-41 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 3e-41 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 6e-41 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 1e-40 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 1e-40 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 4e-40 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 5e-40 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 1e-39 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 1e-39 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 5e-39 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 3e-38 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 9e-37 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 5e-35 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 1e-31 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 2e-31 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 5e-31 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 7e-30 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 1e-28 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 2e-28 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 3e-28 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 2e-27 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 3e-26 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 1e-25 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 6e-25 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 2e-23 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 5e-23 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 3e-22 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 2e-21 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 3e-15 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 7e-13 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 9e-13 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-12 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 1e-04 |
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 356 bits (917), Expect = e-118
Identities = 123/466 (26%), Positives = 191/466 (40%), Gaps = 40/466 (8%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+ S A+VD A+KAQ WA + +R + + + EH+E I E +++
Sbjct: 41 IAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKES 100
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKW---LKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
G T A EI S + + P + +++ GVVG
Sbjct: 101 GSTRSKA-NLEITLAGNITKESASFPGRVHGRISPSNTPGKENRVYRV------AKGVVG 153
Query: 121 AIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 177
I WN+P + P LA GN +VIK + + +G I G P
Sbjct: 154 VISPWNFPLNLSIRSVAPALAV---GNAVVIKPASDTPVTG---GVIPARIFEEAGVPAG 207
Query: 178 LVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNA--SKTLTPVTLELGGKDAF 232
++ + G G+ V+ I F GS VGR + A + V LELGG F
Sbjct: 208 VISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPF 267
Query: 233 IVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 288
+V D D+ A +AA GQ C R V ++ F+ + + VK++
Sbjct: 268 VVLADADI----DAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPT 323
Query: 289 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 348
G P A +G + L+ + A +GA + G + P V
Sbjct: 324 GDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIE-------GRLVHPHVFS 376
Query: 349 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 408
+V M++ +EE FGP++ ++K + + +LAN S +GL AV+S RA + A QI
Sbjct: 377 DVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQID 436
Query: 409 CGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
G+ IND N + FGG K+SG GRF G + + +
Sbjct: 437 SGMVHINDLTVNDEPH-VMFGGSKNSGLGRFNGDWAIEEFTTDRWI 481
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 349 bits (899), Expect = e-116
Identities = 135/461 (29%), Positives = 214/461 (46%), Gaps = 25/461 (5%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
L P + E++ ++ A K W +S QR Q LR + + + H E + + +R+
Sbjct: 20 LAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREM 79
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 123
GK + A E+ + W G L PE +++A +E+ PLGV+ AI+
Sbjct: 80 GKPIKQA-RAEVTKSAALCDWYAEHGPAMLNPEPTLVE----NQQAVIEYRPLGVILAIM 134
Query: 124 SWNYPFHNIF---NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
WN+P + P+L A GN ++K + N + ++I LA G P +
Sbjct: 135 PWNFPLWQVLRGAVPILLA---GNSYLLKHAPNVTGCA----QMIARILAEAGTPAGVYG 187
Query: 181 VITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238
+ E +++ + + GS G I A L LELGG D FIV +D
Sbjct: 188 WVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDA 247
Query: 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 298
D+ + AV Q++GQ CA A+RF V I F + ++ G PL + D+
Sbjct: 248 DLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDL 307
Query: 299 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ 358
G + + ++L V ++ +GA +L G EG Y+ TV+ +V M +
Sbjct: 308 GPMARFDLRDELHQQVQASVAEGARLLLGGE-KIAGEGN---YYAATVLADVTPDMTAFR 363
Query: 359 EEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF- 417
+E FGP+ I + LANDS +GL +F+ A E+AA+++CG IN +
Sbjct: 364 QELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYS 423
Query: 418 ASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458
AS+ + FGGVK SGFGR GL C V++V ++R
Sbjct: 424 ASD---ARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 350 bits (900), Expect = e-116
Identities = 120/459 (26%), Positives = 206/459 (44%), Gaps = 25/459 (5%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+ + ++DE + A K W R + L + + EH++ + ++ + +
Sbjct: 17 FASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEM 76
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 123
GK + ++ E+ + G + LKP +S A GV+ A
Sbjct: 77 GKLLSES-KEEVELCVSICNYYADHGPEMLKPTKLNSD----LGNAYYLKQSTGVIMACE 131
Query: 124 SWNYPFHNIF---NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
WN+P + + P GN I++K + N S +II+ A GAPE +
Sbjct: 132 PWNFPLYQVIRVFAPNFIV---GNPILLKHAHNVPGSAALTAKIIKRA----GAPEGSLI 184
Query: 181 VITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238
+ + +++ + + GS G + A K L T+ELGG DAFIV DD
Sbjct: 185 NLYPSYDQLADIIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDDA 244
Query: 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 298
D + + A + GQ C ++R V + Y + ++ + ++ AG PL +
Sbjct: 245 DPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTL 304
Query: 299 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ 358
+ + EKL+ V +A+D GA++ + S+GA +F PT++ ++ +
Sbjct: 305 PPMNSEKAKEKLEAQVKEAIDAGAKVFYQYP-EIDSKGA---FFRPTILTDIAKDNPVFD 360
Query: 359 EEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF- 417
+E FGPI + D ++LANDS YGLG +V RA++++AQI+ G+ IN
Sbjct: 361 KEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRW 420
Query: 418 ASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456
++ LPFGG+K SG+GR GL A V++
Sbjct: 421 ITS---GELPFGGIKKSGYGRELSGLGLMAFVNEHLVID 456
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 344 bits (885), Expect = e-113
Identities = 141/463 (30%), Positives = 229/463 (49%), Gaps = 31/463 (6%)
Query: 4 LGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
+G P + A+VD VA AR A W + +R + +K + E ++L ++ +
Sbjct: 37 VGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAA 96
Query: 62 DTGKTMVDASLGEIMTTCEKITWLLSEGEK--WLKPEYRSSGRSMIHKKAKVEFHPLGVV 119
+TG+ M + + + +K W + S G+S++ ++ P+GVV
Sbjct: 97 ETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSRE------PVGVV 150
Query: 120 GAIVSWNYPFHNIFN---PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 176
GAIV+WN P N P L A G IV+K + + + G PE
Sbjct: 151 GAIVAWNVPLFLAVNKIAPALLA---GCTIVLKPAAETPLTANALAEVFAEV----GLPE 203
Query: 177 NLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 234
++ V+ G ETG+AL S+ +D F GS VGR + R A++ L P TLELGGK A I+
Sbjct: 204 GVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAII 263
Query: 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 294
+DVD+ + V + + ++GQ C R R Y V+ V V ++ GPP
Sbjct: 264 LEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDP 323
Query: 295 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS-FGHLSEGAVDQYF-PPTVIVNVNH 352
+G L + +++ + +++GA ++ G L G +F PTV +V++
Sbjct: 324 AAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNG----FFIQPTVFADVDN 379
Query: 353 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 412
M + QEE FGP++ I+ ++T+E+ + +ANDS YGL +V++ + +I+ QI+ G
Sbjct: 380 KMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTY 439
Query: 413 AINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
IN +A + PFGG K+SG GR G EG+ KSV+
Sbjct: 440 GINWYAFDP---GSPFGGYKNSGIGRENGPEGVEHFTQQKSVL 479
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 341 bits (877), Expect = e-112
Identities = 130/457 (28%), Positives = 202/457 (44%), Gaps = 41/457 (8%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+ + ++++ A+KAQK WAKS+ + R+ L+ Y+ E+++ I + +R+T
Sbjct: 35 ITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARET 94
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI-----HKKAKVEFHPLGV 118
G T++ + E+ T + ++ G + K K+ PLGV
Sbjct: 95 GGTIIKS-TIELEQTIAILDEAMTYT-------GELGGVKEVPSDIEGKTNKIYRLPLGV 146
Query: 119 VGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 175
+ +I +N+P + P +A GN +V K + SG II A G P
Sbjct: 147 ISSISPFNFPMNLSMRSIAPAIAL---GNSVVHKPDIQTAISG---GTIIAKAFEHAGLP 200
Query: 176 ENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 232
+++V+ E G+ ++++ I F GS VGR I A + + LELGG + F
Sbjct: 201 AGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPF 260
Query: 233 IVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 288
V D DV AV AA+ GQ C R VH+D+Y FV + VK +
Sbjct: 261 AVLSDADV----DRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPY 316
Query: 289 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 348
G K +G L EK ++ A G E+ G V P V V
Sbjct: 317 GDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK-------RVGNVLTPYVFV 369
Query: 349 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 408
++ K+ Q E F PI I+K +D+E + +AND+ YGL AVF+ + + A QI
Sbjct: 370 GADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQID 429
Query: 409 CGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 445
G+ +ND + N FGG K SG GRF +
Sbjct: 430 SGMTHVNDQSVNDSPNI-AFGGNKASGVGRFGNPWVV 465
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 339 bits (871), Expect = e-111
Identities = 138/467 (29%), Positives = 213/467 (45%), Gaps = 41/467 (8%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
LG PALS+ EV++ + A+ AQK+W +R L + E +E+I E+ +
Sbjct: 40 LGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEV 99
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKW--------LKPEYRSSGRSMIHKKAKVEFHP 115
K A +GE+ T + I E + S +++ ++ P
Sbjct: 100 AKPKKSA-IGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVERE------P 152
Query: 116 LGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 171
LGVV AI +NYP I P L GN +V K + S SG ++++A A
Sbjct: 153 LGVVLAISPFNYPVNLAAAKIA-PALVT---GNTVVFKPATQGSLSG---IKMVEALADA 205
Query: 172 VGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 228
GAPE ++ V+TG G+ LV +D I F G G I A + PV LELGG
Sbjct: 206 -GAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKA--KMIPVVLELGG 262
Query: 229 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 288
KD IV DD D+ A V A SGQ C +R +V + V+ + ++V+ ++
Sbjct: 263 KDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTV 322
Query: 289 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 348
G P D+ + + + +Q L++DAL+ GA +L+ +G PT++
Sbjct: 323 GSPEDDA-DITPVIDEKSAAFIQGLIDDALENGATLLSGNK----RQGN---LLSPTLLD 374
Query: 349 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 408
+V M++ EE FGP++PI++ E + L+N S YGL ++F+ RA I ++
Sbjct: 375 DVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLE 434
Query: 409 CGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
G IN + PF GVK SG G L + + V
Sbjct: 435 VGTVHINA-KTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTV 480
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 337 bits (867), Expect = e-111
Identities = 123/461 (26%), Positives = 207/461 (44%), Gaps = 31/461 (6%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+G ++A+VD+ V A + +S K+R+ L ++K ++ I + + +
Sbjct: 36 IGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDEL 95
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 123
G + + + + E R G ++ K+ +GV G I
Sbjct: 96 GAPLSLSERVHYQMGLNHFVAARDALDNYEFEERR--GDDLVVKE------AIGVSGLIT 147
Query: 124 SWNYPFHNIFN---PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
WN+P + AA G+ +V+K SE ++ I G P+ + +
Sbjct: 148 PWNFPTNQTSLKLAAAFAA---GSPVVLKPSEETPFAAVILAEIFDKV----GVPKGVFN 200
Query: 181 VITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237
++ G A G L V + F GS G IM A+K V+LELGGK +IV DD
Sbjct: 201 LVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLDD 260
Query: 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD 297
VD+ A+ + ++GQ C R V I F++++ + V G P
Sbjct: 261 VDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQ 320
Query: 298 MGALCLLEHSEKLQNLVNDALDKGAEILARGSF--GHLSEGAVDQYF-PPTVIVNVNHTM 354
+G + + +++QN +N +++GAE+ G L +G YF PT+ +NV++ M
Sbjct: 321 VGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKG----YFARPTIFINVDNQM 376
Query: 355 KLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 414
+ QEE FGP+M ++ +N +E +++AND++YGL V + ++A I+ G I
Sbjct: 377 TIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEI 436
Query: 415 NDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
N+ PFGG K SG GR G G+ VKS+
Sbjct: 437 NEAGRKPDL---PFGGYKQSGLGREWGDYGIEEFLEVKSIA 474
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 338 bits (870), Expect = e-111
Identities = 136/473 (28%), Positives = 209/473 (44%), Gaps = 44/473 (9%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
+ A V+ +A A++AQK WA S R + L+ + E + + + + DTGK + +
Sbjct: 50 TPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQET 109
Query: 71 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKK---AKVEFH-----PLGVVGAI 122
+ + + + + + S ++ +F PLGV I
Sbjct: 110 IVADPTSGADAFEF------------FGGIAPSALNGDYIPLGGDFAYTKRVPLGVCVGI 157
Query: 123 VSWNYPFHNIFN----PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENL 178
+WNYP I P L A GN +V K SEN I+ A G P+ L
Sbjct: 158 GAWNYPQ-QIACWKAAPALVA---GNAMVFKPSENTPLGALKIAEILIEA----GLPKGL 209
Query: 179 VDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236
+VI G +TG LV+ V K+ GS GR + A+ L VT+ELGGK IV D
Sbjct: 210 FNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFD 269
Query: 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 296
D D+ A+ SSGQ C+ R +V + A F+ + + +++ G PL
Sbjct: 270 DADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYAT 329
Query: 297 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSF--GHLSEGAVDQYFPPTVIVNVNHTM 354
+G L EK+ + + +GA ++ G EGA Y PTV +V M
Sbjct: 330 HLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGA---YVQPTVFADVTDDM 386
Query: 355 KLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 414
+ +EE FGP+M ++ F+ ++EV+ AN + +GL VF+ RA + ++ G I
Sbjct: 387 TIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWI 446
Query: 415 NDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV---VEDRWWPYIK 464
N + N +PFGG K SGFGR L +K+V PY +
Sbjct: 447 NTY--NLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTGKVDAPYAE 497
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 333 bits (857), Expect = e-109
Identities = 148/464 (31%), Positives = 221/464 (47%), Gaps = 35/464 (7%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
LG PA+S EVD A A+KAQ W S+ +R +L + ++ +E I I S++
Sbjct: 31 LGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEV 90
Query: 64 GKTMVDASLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGRSMIHKKAKVEFHPLGV 118
K A + E++ T E I + E GE + ++ + K A V P+G+
Sbjct: 91 AKGYKSA-VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASK---KKIAVVRREPVGL 146
Query: 119 VGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 174
V AI +NYP I P L A GN I K S SG + +A A G
Sbjct: 147 VLAISPFNYPVNLAGSKIA-PALIA---GNVIAFKPPTQGSISG---LLLAEAFAEA-GL 198
Query: 175 PENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 231
P + + ITG E G+ +V V+ I F GS G+G I + A + P+ LELGGKD+
Sbjct: 199 PAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDS 256
Query: 232 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 291
IV +D D+ A+ + A SGQ C +R V + V ++ + V +++ G P
Sbjct: 257 AIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP 316
Query: 292 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN 351
D+ L + ++ ++ L+NDA DKGA L EG P + V
Sbjct: 317 EDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIK----REGN---LICPILFDKVT 368
Query: 352 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 411
M+L EE FGP++PI++ + EE ++++N S YGL ++F+ RA IA Q++ G
Sbjct: 369 TDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGT 428
Query: 412 AAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
IN+ + + PF G K SG G + A VKSVV
Sbjct: 429 VHINN-KTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 333 bits (857), Expect = e-109
Identities = 126/451 (27%), Positives = 204/451 (45%), Gaps = 33/451 (7%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+ PALSR E E + A K ++V +R L + K I E +E + +I + D
Sbjct: 25 IKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKILAIDA 84
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHPLGVVGA 121
GK + A E+ + + + P+G+VGA
Sbjct: 85 GKPIKQA-RVEVERSIGTFKLAAFYVK-------EHRDEVIPSDDRLIFTRREPVGIVGA 136
Query: 122 IVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 177
I +N+P H I P +A GN IV S A +II+ AL P
Sbjct: 137 ITPFNFPLNLSAHKI-APAIAT---GNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLG 192
Query: 178 LVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 234
+ +++TG E G+ +V + V+ I F GS VG +I + A + LELGG + IV
Sbjct: 193 VYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVNPNIV 250
Query: 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 294
D D+ ++ + +GQ C V I F+ K ++ G PL
Sbjct: 251 LKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDE 310
Query: 295 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM 354
K D+G L +EH+E ++ +V A+D+G ++L G F PT++ V+
Sbjct: 311 KTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK-------RDKALFYPTIL-EVDRDN 362
Query: 355 KLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 414
L + E F P++PI++ +EE++ +AN + YGL A+F+ +++ + A ++ G I
Sbjct: 363 ILCKTETFAPVIPIIRT-NEEEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVI 421
Query: 415 NDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 445
ND +S + ++PFGGVK SG GR +
Sbjct: 422 ND-SSLFRQDNMPFGGVKKSGLGREGVKYAM 451
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 332 bits (853), Expect = e-108
Identities = 149/479 (31%), Positives = 227/479 (47%), Gaps = 51/479 (10%)
Query: 11 SRAEVDERVAQARKA-----QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGK 65
++ +VD VA A+ A WA +S R ++LR + + E + + ++ S D GK
Sbjct: 43 TKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGK 102
Query: 66 TMVDASLGEIMTT----------CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHP 115
+ +A +I EK+ + + M K+ V P
Sbjct: 103 PLDEA-AWDIDDVAGCFEYYADLAEKL-----DAR-----QKAPVSLPMDTFKSHVLREP 151
Query: 116 LGVVGAIVSWNYPFHNIF---NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 172
+GVVG I WNYP P LAA G ++K SE AS + I +
Sbjct: 152 IGVVGLITPWNYPMLMATWKVAPALAA---GCAAILKPSELASLTCLELGEICKEV---- 204
Query: 173 GAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 229
G P +++++TG E G L + VDK+ F GS G IM A++ + PV+LELGGK
Sbjct: 205 GLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGK 264
Query: 230 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 289
+V +DVD+ A+ A+ ++GQ C+ R +H I F++++ K +K++
Sbjct: 265 SPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKIS 324
Query: 290 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS-FGHLSEGAVDQYF-PPTVI 347
PL +G + EK+ V++A +GA IL GS HL +G +F PT+I
Sbjct: 325 DPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKG----FFIEPTII 380
Query: 348 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 407
+V M++ +EE FGP++ + F+T+EE + LAND+ YGLG AV S R +
Sbjct: 381 TDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAF 440
Query: 408 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV----EDRWWPY 462
+ G+ +N P+GGVK SGFGR G GL VK V E+ W Y
Sbjct: 441 KAGIVWVNCS--QPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYISEEPWGWY 497
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 331 bits (851), Expect = e-108
Identities = 141/463 (30%), Positives = 219/463 (47%), Gaps = 43/463 (9%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
EVD+ V A+ A W+K + +R + + + I E ++ I ++ + GKT+ +A
Sbjct: 56 GAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEA 115
Query: 71 SLGEIMTT----------CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
+I + G+ + G + A PLGV
Sbjct: 116 E-YDIDAAWQCIEYYAGLAPTL-----SGQ-----HIQLPGGAF----AYTRREPLGVCA 160
Query: 121 AIVSWNYPFHNIFN----PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 176
I++WNYPF I P LA GN +V K S +G I A G P
Sbjct: 161 GILAWNYPF-MIAAWKCAPALAC---GNAVVFKPSPMTPVTGVILAEIFHEA----GVPV 212
Query: 177 NLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 234
LV+V+ G AETG L +V K+ F GS G+ +M ++KT+ VTLELGGK ++
Sbjct: 213 GLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLI 272
Query: 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 294
D ++ + + A+ A + GQ C R +V R+I F+ +V K K++ G PL
Sbjct: 273 FKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLT 332
Query: 295 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ-YF-PPTVIVNVNH 352
+ MG L +K+ V A +GA +L G S+ + YF P V+ N
Sbjct: 333 ETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRD 392
Query: 353 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 412
M ++EE FGP+M ++ F+T+EEV++ AN++ +GL VF+ RA +AA ++ G
Sbjct: 393 DMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTC 452
Query: 413 AINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
IN + + +PFGG K SGFGR G + +K+V+
Sbjct: 453 YINTY--SISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVI 493
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 330 bits (849), Expect = e-108
Identities = 120/470 (25%), Positives = 199/470 (42%), Gaps = 48/470 (10%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY---IIEHQELICEISS 60
+ S A++D V A +A W++++ +R LLK I + + + +
Sbjct: 53 IIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERS---NALLKIADAIEKEADEFAALEA 109
Query: 61 RDTGKTMVDASLGEIMTT----------CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAK 110
+ GK + E+ + EY SMI +
Sbjct: 110 LNCGKPINAVKNDELPAIIDCWRFFAGAVRNL-----HAP--AAGEYLPGHTSMIRRD-- 160
Query: 111 VEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 167
P+G+VG+I WNYP + P + GN +V K SE + R+I
Sbjct: 161 ----PIGIVGSIAPWNYPLMMMAWKLAPAIGG---GNTVVFKPSEQTPLTALKLARLIAD 213
Query: 168 ALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 224
L PE +V+VITG ET G AL++ V + G G+ ++ A+KT+ L
Sbjct: 214 IL-----PEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHL 268
Query: 225 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 284
ELGGK IV D D+ V ++GQ+C A R Y IY V+ + V
Sbjct: 269 ELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVS 328
Query: 285 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPP 344
++ + ++G L +++ + V A D+ + G EG +F P
Sbjct: 329 TIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGF---FFQP 385
Query: 345 TVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIA 404
TV+ ++++ E FGP++ + +F ++ V ANDS YGL +V++ +A A
Sbjct: 386 TVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAA 445
Query: 405 AQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
+++Q G IN + +P GG+K SG+G+ V L V+ +
Sbjct: 446 SRLQYGCTWINTH--FMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHI 493
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 330 bits (848), Expect = e-108
Identities = 102/465 (21%), Positives = 192/465 (41%), Gaps = 34/465 (7%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+ +VD V AR+A WA+ +QR + L + + + + +T
Sbjct: 33 VWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEET 92
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWL--KPEYRSSGRSMIHKKAKVEFHPLGVVGA 121
GK + ++ E+ + K+ + + K + +++ K P GVV
Sbjct: 93 GKPLWES-ATEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHK------PHGVVAV 145
Query: 122 IVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENL 178
+N+P H P L A GN +V K SE + A G P +
Sbjct: 146 FGPYNFPGHLPNGHIVPALLA---GNCVVFKPSELTPKVAELTLKAWIQA----GLPAGV 198
Query: 179 VDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVC 235
++++ G ETG AL + +D + F GS G ++ + + LE+GG + +V
Sbjct: 199 LNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVE 258
Query: 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYA-LFVSQVAKIVKSVSAGPPLA- 293
+ D+ +++A S+GQ C A R V + + ++++ + ++ G
Sbjct: 259 EVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQ 318
Query: 294 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT 353
MGA+ L +E L + KGA+ L + +GA P ++ +V+
Sbjct: 319 PAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMT--QPIDGA--ALLTPGIL-DVSAV 373
Query: 354 MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 413
+ EE FGP++ +++++ ++ AN ++YGL + S S+ R + + + G+
Sbjct: 374 AERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVN 433
Query: 414 IND--FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456
N + S PFGG+ SG R + C + +E
Sbjct: 434 WNKQLTGAAS---SAPFGGIGASGNHRPSAYYAADYCAYPVASLE 475
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 330 bits (848), Expect = e-108
Identities = 130/470 (27%), Positives = 206/470 (43%), Gaps = 48/470 (10%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY---IIEHQELICEISS 60
L S +VD V A A W +++ K R LLK I E+ ++ E+ S
Sbjct: 51 LLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRA---ECLLKLADVIEENGQVFAELES 107
Query: 61 RDTGKTMVDASLGEIMTT----------CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAK 110
R+ GK + A EI + G EY SMI +
Sbjct: 108 RNCGKPLHSAFNDEIPAIVDVFRFFAGAARCL-----NGL--AAGEYLEGHTSMIRRD-- 158
Query: 111 VEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 167
PLGVV +I WNYP P LAA GN +V+K SE + + +
Sbjct: 159 ----PLGVVASIAPWNYPLMMAAWKLAPALAA---GNCVVLKPSEITPLTALKLAELAKD 211
Query: 168 ALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 224
P +V+++ G +T G+ L V + GS G I+ + + ++ +
Sbjct: 212 IF-----PAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHM 266
Query: 225 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 284
ELGGK IV DD D+ V + ++GQ+C A R Y + IY V ++ V
Sbjct: 267 ELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVA 326
Query: 285 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPP 344
++ +G P ++G L L H E++ V +A G + G G Y+ P
Sbjct: 327 TLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGY---YYAP 383
Query: 345 TVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIA 404
T++ ++Q+E FGP++ + F+ +E+VV ANDS+YGL +V++ RA ++
Sbjct: 384 TLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVS 443
Query: 405 AQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
A++Q G +N + +P GG K SG+G+ + GL +V+ V
Sbjct: 444 ARLQYGCTWVNTH--FMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHV 491
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 330 bits (848), Expect = e-108
Identities = 129/462 (27%), Positives = 215/462 (46%), Gaps = 32/462 (6%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
S + D+ + A+KA + W +S +R F+ +L+ + + + S +
Sbjct: 54 CAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEM 113
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEK--WLKPEYRSSGRSMIHKKAKVEFHPLGVVGA 121
G + A + T I + ++ + + + ++++H +GVVG
Sbjct: 114 GAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALIEGNEQAILHYD------AIGVVGL 167
Query: 122 IVSWNYPFHNIFN---PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENL 178
I WN+P + + P L A G +V+K SE A S + I+ A P +
Sbjct: 168 ITPWNWPMNQVTLKVIPALLA---GCTMVLKPSEIAPLSAMLFAEILDEA----ALPSGV 220
Query: 179 VDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235
++I G A G L + ++ I F GS G+ I +NAS TL V LELGGK A I+
Sbjct: 221 FNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIF 280
Query: 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 295
D D+ + + VR +SGQ+C R V + IY + I + GP
Sbjct: 281 ADADIDALQR-GVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTG 339
Query: 296 YDMGALCLLEHSEKLQNLVNDALDKGAEILA--RGSFGHLSEGAVDQYF-PPTVIVNVNH 352
+G + E +K+Q+L+ +D+GA ++ G + G Y+ PTV +V
Sbjct: 340 NHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERG----YYVRPTVFADVKP 395
Query: 353 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 412
M++ +EE FGP++ ++ FNT++E V LAND+ YGL + S + + R IAAQ++ G+
Sbjct: 396 HMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMV 455
Query: 413 AINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
+N FGGVK SG R G+ G++ K++
Sbjct: 456 EVNGHELPG---GSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 329 bits (845), Expect = e-107
Identities = 132/483 (27%), Positives = 222/483 (45%), Gaps = 45/483 (9%)
Query: 4 LGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
+ ++ + + + AR+A + W++ + + R + +R + I EH+E + + +
Sbjct: 61 IFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETL 120
Query: 62 DTGKTMVDASLGEIMTT----------CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKV 111
DTGKT+ ++ ++ +K G + ++K+
Sbjct: 121 DTGKTLEES-YADMDDIHNVFMYFAGLADKD-----GG--------EMIDSPIPDTESKI 166
Query: 112 EFHPLGVVGAIVSWNYPFHNIF---NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 168
P+GVV I WNYP P LA G +V+K SE + F +++
Sbjct: 167 VKEPVGVVTQITPWNYPLLQASWKIAPALAT---GCSLVMKPSEITPLTTIRVFELMEEV 223
Query: 169 LAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLE 225
G P+ +++I G +E G+ + VD + F G G+ IM+NA+ +T + LE
Sbjct: 224 ----GFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALE 279
Query: 226 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 285
LGGK+ I+ DD D A+ +GQ C+ R V I F + VK
Sbjct: 280 LGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKK 339
Query: 286 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 345
+ G +MG + EH K+++ ++ A +GA I G + +F PT
Sbjct: 340 IKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPT 399
Query: 346 VIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 405
VI N + +M+++QEE FGP++ + F T++E ++LANDS YGL AVFS +A+ +A
Sbjct: 400 VITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVAN 459
Query: 406 QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV----EDRWWP 461
+++ G INDF + P+GG K SG GR G EGL + K ++
Sbjct: 460 KLKLGTVWINDF--HPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNTNPQLVNW 517
Query: 462 YIK 464
+ K
Sbjct: 518 FSK 520
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 324 bits (834), Expect = e-106
Identities = 111/468 (23%), Positives = 186/468 (39%), Gaps = 39/468 (8%)
Query: 4 LGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRD 62
+ + SR EV+ + K + +R LR I + ++ E+ +
Sbjct: 45 IAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMN 104
Query: 63 TGKTMVDASLGEIMTTCEKITWLLSEGEKW------LKPEYRSSGRSMIHKKAKVEFHPL 116
GK A +GE+ +++ + +K Y + + ++ PL
Sbjct: 105 AGKPKSAA-VGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRR-----EPL 158
Query: 117 GVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 172
GVV AI +NYP + I GN +V+K S + + + A
Sbjct: 159 GVVAAITPFNYPLFDAVNKIT-YSFIY---GNAVVVKPSISDPLPAAMAVKALLDA---- 210
Query: 173 GAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 230
G P + + ++ + E +V+ V + F GS VG +++ + +ELGG D
Sbjct: 211 GFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVG--GVKQYVMELGGGD 268
Query: 231 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 290
IV +D D+ A R +GQ C + R +Y V +VAK + S+ G
Sbjct: 269 PAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGD 328
Query: 291 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI--- 347
P D+G L +++ + DA++KG +LA G G Y PT +
Sbjct: 329 PRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR----RLGP--TYVQPTFVEAP 382
Query: 348 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 407
+ M L + E F P+ ++ ++ ++LAN YGL AVF + R +
Sbjct: 383 ADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLL 442
Query: 408 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
+ G IND + PFGG K SG R + A K++V
Sbjct: 443 EVGAIYIND-MPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 322 bits (828), Expect = e-104
Identities = 132/462 (28%), Positives = 200/462 (43%), Gaps = 44/462 (9%)
Query: 11 SRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 68
S +V + VA ARKA W + S +R + + + I+ QE + I S + GK +
Sbjct: 59 SADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIA 118
Query: 69 DASLGEIMTT----------CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGV 118
A GEI + EG+ ++ ++ P+GV
Sbjct: 119 QA-RGEIGFCADLWSYAAGQARAL-----EGQ--THNNIGDDRLGLVLRE------PVGV 164
Query: 119 VGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 175
VG I WN+PF + + G +V+K SE S + + + A G P
Sbjct: 165 VGIITPWNFPFIIASERVPWAIGS---GCTVVLKPSEFTSGTSIRLAELAREA----GIP 217
Query: 176 ENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 232
+ + +V+TG+ G+ L VD + F GS VG + A++T+ V LELGGK
Sbjct: 218 DGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQ 277
Query: 233 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 292
IV D D+ A ++GQ C R V I + ++ I + V+ G PL
Sbjct: 278 IVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPL 337
Query: 293 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 352
+ +GA+ H+EK+ + V + GAE+L G G Y+ PTV V
Sbjct: 338 NERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAG---LYYAPTVFAGVTP 394
Query: 353 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 412
M + +EE FGP++ + F T +E V LAN + +GL +V+S + A + +I+ G
Sbjct: 395 DMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRC 454
Query: 413 AINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
IN LP GG K SG GR G G K V
Sbjct: 455 WINSV--IDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGV 494
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 317 bits (816), Expect = e-103
Identities = 130/455 (28%), Positives = 208/455 (45%), Gaps = 27/455 (5%)
Query: 11 SRAEVDERVAQARKA---QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
+ +VD+ V AR+A W +R + L L I + L+ + + + GK
Sbjct: 56 DKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLF 115
Query: 68 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 127
+A L ++ + + + +K G P+GV G I+ WN+
Sbjct: 116 SNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFF----TYTRSEPVGVCGQIIPWNF 171
Query: 128 PFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 184
P P L+ GN +V+K +E + +I+ A G P +V+++ G
Sbjct: 172 PLLMFLWKIGPALSC---GNTVVVKPAEQTPLTALHMGSLIKEA----GFPPGVVNIVPG 224
Query: 185 FAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDV 240
+ T G A+ S VDK+ F GS VG++I A K+ L V+LELGGK IV D D+
Sbjct: 225 YGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADL 284
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
+ + A + GQ C A R +V IY FV + + K G PL G
Sbjct: 285 DNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGP 344
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
E EK+ +L+ +GA++ G ++G + PTV +V M++ +EE
Sbjct: 345 QIDKEQYEKILDLIESGKKEGAKLECGGG-PWGNKGY---FIQPTVFSDVTDDMRIAKEE 400
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
FGP+ IMKF + ++V+K AN++ YGL +F+ +A +++ +Q G +N + +
Sbjct: 401 IFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCY--S 458
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
+ PFGG K SG GR G G VK+V
Sbjct: 459 VVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVT 493
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 315 bits (810), Expect = e-102
Identities = 140/455 (30%), Positives = 207/455 (45%), Gaps = 27/455 (5%)
Query: 11 SRAEVDERVAQARKA---QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
+ +VD+ V AR A W + R + L L I + + + + D GK
Sbjct: 55 DKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPY 114
Query: 68 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 127
V + L ++ + + + +K+ G + P+GV G I+ WN+
Sbjct: 115 VISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFF----SYTRHEPVGVCGQIIPWNF 170
Query: 128 PFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 184
P P LA GN +V+KV+E + + +I+ A G P +V+++ G
Sbjct: 171 PLLMQAWKLGPALAT---GNVVVMKVAEQTPLTALYVANLIKEA----GFPPGVVNIVPG 223
Query: 185 FAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDV 240
F T G A+ S VDK+ F GS +GR+I A + L VTLELGGK I+ D D+
Sbjct: 224 FGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADM 283
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
+ A A + GQ R +V DIY FV + KS G P K + G
Sbjct: 284 DWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGP 343
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
+K+ +N +GA++L G G + PTV +V M + +EE
Sbjct: 344 QVDETQFKKILGYINTGKQEGAKLLCGGG-IAADRGY---FIQPTVFGDVQDGMTIAKEE 399
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +Q G +N + +
Sbjct: 400 IFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCY--D 457
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
PFGG K SG GR G GL+A VK+V
Sbjct: 458 VFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 315 bits (809), Expect = e-102
Identities = 126/455 (27%), Positives = 209/455 (45%), Gaps = 24/455 (5%)
Query: 11 SRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 68
++VD+ VA A++A +W K + + R + L L + +HQE + I + D G
Sbjct: 72 QVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYT 131
Query: 69 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 128
A + + + + +K + + P+GV G ++ WNYP
Sbjct: 132 LALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYP 191
Query: 129 FHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 185
+ LAA GN +VIK ++ + + + A G P+ +V+++ G
Sbjct: 192 LMMLSWKTAACLAA---GNTVVIKPAQVTPLTALKFAELTLKA----GIPKGVVNILPGS 244
Query: 186 AET-GEALVS--SVDKIIFVGSPGVGRMIMRNASK-TLTPVTLELGGKDAFIVCDDVDVP 241
G+ L V KI F GS VG+ IM++ + + V+LELGGK I+ D D+
Sbjct: 245 GSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLN 304
Query: 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 301
Q+ + + + G+NC A R +V I+ FV +V + V+ + G PL + G
Sbjct: 305 KAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQ 364
Query: 302 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 361
H KL + +GA ++ G+ G +F PTV +V M + +EE+
Sbjct: 365 NHEAHLRKLVEYCQRGVKEGATLVCGGN-QVPRPGF---FFQPTVFTDVEDHMYIAKEES 420
Query: 362 FGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFAS 419
FGPIM I +F + V+ AN + +GL VF+ ++A ++ ++Q G IN +
Sbjct: 421 FGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTY-- 478
Query: 420 NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
N + PFGG K SGFG+ G L +K+V
Sbjct: 479 NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 315 bits (810), Expect = e-102
Identities = 106/492 (21%), Positives = 206/492 (41%), Gaps = 37/492 (7%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY---IIEHQELICEISS 60
+G ++ ++ + A +A + W + ++R IL+K I +
Sbjct: 65 VGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERA---NILVKAAAIIRRRKHEFSAWLV 121
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
+ GK +A + + + + + + + + S ++ + + P+GV
Sbjct: 122 HEAGKPWKEA-DADTAEAIDFLEYYARQMIELNRGKEILSRPG---EQNRYFYTPMGVTV 177
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
I WN+ + +A + +GN +V+K + + +++ A G P+ +++
Sbjct: 178 TISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDA----GLPKGVIN 233
Query: 181 VITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASK------TLTPVTLELGGKDA 231
+ G G+ LV I F GS VG + A+ L V +E+GGKD
Sbjct: 234 YVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDT 293
Query: 232 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 291
+V D D+ A+ + +A SGQ C+ R +H+D+Y + + + K+++ G P
Sbjct: 294 VVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDP 353
Query: 292 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVIVNV 350
MG + + EK+ + + +G ++ G G S G +F PT+I ++
Sbjct: 354 TNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGE-GDSSTG----FFIQPTIIADL 407
Query: 351 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 410
+ +MQEE FGP++ K N + +++AN++ YGL AV + ++ + + G
Sbjct: 408 DPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVG 467
Query: 411 VAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVED----RWWPYIKT 465
N + + PFGG K SG + G + L K+V E ++
Sbjct: 468 NLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMYAENLYFQSHHH 527
Query: 466 KIPKPIQYPVAE 477
+P E
Sbjct: 528 --HHHWSHPQFE 537
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 313 bits (805), Expect = e-101
Identities = 131/478 (27%), Positives = 212/478 (44%), Gaps = 46/478 (9%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY---IIEHQELICEISSRDTGKTM 67
EVD A +A + W+++ K+R+ R LL+ I +H + + + D G+ +
Sbjct: 62 GEREVDRAAKAAHEAFQRWSRTKAKERK---RYLLRIAELIEKHADELAVMECLDAGQVL 118
Query: 68 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH---PLGVVGAIVS 124
++ E + E + R+ + + + P G VG I
Sbjct: 119 RIVR-AQVARAAENFAFYAEYAEHAM------EDRTFPVDRDWLYYTVRVPAGPVGIITP 171
Query: 125 WNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 181
WN P P LA GN +V+K +E + ++ I++ A P + ++
Sbjct: 172 WNAPLMLSTWRIAPALAF---GNTVVLKPAEWSPFTATKLAEILKEA----DLPPGVFNL 224
Query: 182 ITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238
+ GF E G ALV+ V + G G+++MRNA+ L ++ ELGGK +V D
Sbjct: 225 VQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADA 284
Query: 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 298
D+ V +G+ C + R V I+ FV +V + +++ G PL + ++
Sbjct: 285 DLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEV 344
Query: 299 GALCLLEHSEKLQNLVNDALDKGAEILARG-------SFGHLSEGAVDQYFPPTVIVNVN 351
G L EH +++ V +GA +L G LS G Y PTV V N
Sbjct: 345 GPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRG---NYLLPTVFVGEN 401
Query: 352 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 411
H MK+ QEE FGP++ + F +EE ++ AND++YGL VF+ RA +A +++ G+
Sbjct: 402 H-MKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGM 460
Query: 412 AAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPK 469
+N N PFGGVK SG R G L +K++ P +PK
Sbjct: 461 VYLNSH--NVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTI----ALPLRPPHVPK 512
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 307 bits (788), Expect = 2e-99
Identities = 132/460 (28%), Positives = 207/460 (45%), Gaps = 46/460 (10%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+ P + + + A +AQ W +R +LR + I E I + +
Sbjct: 35 ISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEG 94
Query: 64 GKTMVDASLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGRSMIHKKAKVEFHPLGV 118
GK A E+ T + I ++ GE + R ++ K+ LGV
Sbjct: 95 GKIQQLA-EVEVAFTADYIDYMAEWARRYEGE--IIQSDRPGENILLFKR------ALGV 145
Query: 119 VGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA-VGA 174
I+ WN+PF I P L GN IVIK SE + I A + +G
Sbjct: 146 TTGILPWNFPFFLIARKMAPALLT---GNTIVIKPSEFTPNNA-----IAFAKIVDEIGL 197
Query: 175 PENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 231
P + +++ G G+ L + V + GS G IM A+K +T V LELGGK
Sbjct: 198 PRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAP 257
Query: 232 FIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 287
IV DD D+ AV+A + S SGQ C AER YV + IY FV+++ + +++V
Sbjct: 258 AIVMDDADLEL----AVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQ 313
Query: 288 AGPPL-AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 346
G P MG L E+++ V A+++GA + G +G Y+PPT+
Sbjct: 314 FGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGK-AVEGKG---YYYPPTL 369
Query: 347 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 406
+++V M +M EE FGP++P++ F+T E+ + +ANDS YGL ++++ + + A +
Sbjct: 370 LLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKG 429
Query: 407 IQCGVAAINDFA-SNYMCQSLPFGGVKDSGFGRFAGVEGL 445
++ G IN G + SG G G GL
Sbjct: 430 LKFGETYINRENFEAMQG---FHAGWRKSGIGGADGKHGL 466
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 305 bits (784), Expect = 2e-98
Identities = 106/464 (22%), Positives = 191/464 (41%), Gaps = 31/464 (6%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+ S A+ +E V +AR+A K+WA +R + +R + + E +++ + S +
Sbjct: 50 IARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEM 109
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM----IHKKAKVEFHPLGVV 119
GK +V+ +GE+ + + + G + +++P+G+V
Sbjct: 110 GKILVEG-VGEVQEYVDICDYAVGLSR-------MIGGPILPSERSGHALIEQWNPVGLV 161
Query: 120 GAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENL 178
G I ++N+P N +A + GN + K + S +II L P +
Sbjct: 162 GIITAFNFPVAVYGWNNAIAMI-CGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAI 220
Query: 179 VDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236
+ G A+ G A+ V+ + F GS VG+ + + LELGG +A I +
Sbjct: 221 CSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFE 280
Query: 237 DVDVPHVAQIAVRAALQS----SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 292
D D+ + V +AL + +GQ C A R ++H I+ V+++ K + G P
Sbjct: 281 DADL----SLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPW 336
Query: 293 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 352
G L + V +A +G ++ G + Y PT++ + H
Sbjct: 337 DPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGG--KVMDRPG--NYVEPTIVTGLGH 392
Query: 353 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE--IAAQIQCG 410
+ E F PI+ + KF +EEV N+ + GL ++F+ R CG
Sbjct: 393 DASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCG 452
Query: 411 VAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
+ +N S FGG K +G GR +G + + +
Sbjct: 453 IVNVNIPTSGAEIG-GAFGGEKHTGGGRESGSDAWKQYMRRSTC 495
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 302 bits (776), Expect = 7e-97
Identities = 71/493 (14%), Positives = 152/493 (30%), Gaps = 54/493 (10%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
L + ++ QR L ++K + + I++ ++
Sbjct: 35 LVRVSSEGLDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDYYAIATANS 94
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEK------WLKPEYRSSGRSMIHKKAKVEFHPLG 117
G T D+ +I +++ G S + V G
Sbjct: 95 GTTRNDS-AVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRG 153
Query: 118 VVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 174
V I ++N+P + P L + G +++K + +W R++ + A
Sbjct: 154 VALFINAFNFPSWGLWEKAAPALLS---GVPVIVKPATATAWLT---QRMVADVVDAGIL 207
Query: 175 PENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT--LTPVTLELGGKD 230
P + +I G + L S D + F GS + + + + ++ +
Sbjct: 208 PPGALSIICGSS--AGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLN 265
Query: 231 AFIVCDDVDVPHV-----AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 285
+ I+C D + VR SGQ C R +V + + +
Sbjct: 266 SAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAK 325
Query: 286 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF----GHLSEGAVDQY 341
++ G P MG+L E E + + ++ + + A
Sbjct: 326 ITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAA---C 382
Query: 342 FPPTV--IVNVNHTMKLMQEEAFGPIMPIMKFNT--------DEEVVKLANDSRYGLGCA 391
P + + + ++ L E FGP+ + + + V LA + L +
Sbjct: 383 VAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVAS 442
Query: 392 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQS---------LPFGGVKDSGFGR-FAG 441
++S +A ++ ++ + + GG +G G G
Sbjct: 443 IYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGG 502
Query: 442 VEGLRACCLVKSV 454
+ L ++
Sbjct: 503 LRALAFYHRRSAI 515
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 298 bits (765), Expect = 1e-95
Identities = 127/455 (27%), Positives = 208/455 (45%), Gaps = 33/455 (7%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+G PA +A+ + + A+ AQK WAK + + R+ LR I E++ ++ + +
Sbjct: 41 IGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQ 100
Query: 64 GKTMVDASLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGRSMIHKKAKVEFHPLGV 118
GK + A E+ T I + G+ + P + IHK P GV
Sbjct: 101 GKLLSVA-EMEVDVTATFIDYGCDNALTIEGD--ILPSDNQDEKIYIHKV------PRGV 151
Query: 119 VGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA-VGA 174
V I +WN+P P L GN +V+K ++ + +A G
Sbjct: 152 VVGITAWNFPLALAGRKIGPALIT---GNTMVLKPTQETPLAT-----TELGRIAKEAGL 203
Query: 175 PENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 231
P+ +++VI G G+ L S I GS G+ I + +++ +TPV LELGGK
Sbjct: 204 PDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAP 263
Query: 232 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 291
+V DD D+ A+ A+ + GQ C ER YVH +Y F+++ +VK + G P
Sbjct: 264 MVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDP 323
Query: 292 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN 351
+ MG C + + ++V++A+ +GA + G + ++ PTV+V+V
Sbjct: 324 MDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVK 383
Query: 352 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 411
++ EE FGPI+PI+K ++ E+ ++ NDS YGL V + S + + ++ G
Sbjct: 384 QDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGE 443
Query: 412 AAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 445
IN + G K SGFG G GL
Sbjct: 444 VYINRGMGEQHQG---FHNGWKQSGFGGEDGKFGL 475
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 298 bits (765), Expect = 2e-95
Identities = 117/468 (25%), Positives = 188/468 (40%), Gaps = 31/468 (6%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+G +AE + + A KA K W + R + L + + + +
Sbjct: 65 VGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEV 124
Query: 64 GKTMVDASLGEIMTTCEKITWLL---SEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
GK V+A ++ E I ++ ++ P + + PLG
Sbjct: 125 GKNWVEA-SADV---AEAIDFIEYYARAALRYRYPAVEVVPYPGED--NESFYVPLGAGV 178
Query: 121 AIVSWNYPFHNIFNPML-AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLV 179
I WN+P IF M+ V GN ++ K +E+A G F I A G P +V
Sbjct: 179 VIAPWNFPV-AIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA----GFPPGVV 233
Query: 180 DVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKT------LTPVTLELGGKD 230
+ + G E G LV + I F GS VG I A + +E GGK+
Sbjct: 234 NFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKN 293
Query: 231 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 290
A IV + D A+ V +A GQ C+ A R + + Y + +V K + +S GP
Sbjct: 294 AIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGP 353
Query: 291 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 350
D+G + E K+ + + ++G +L EG + PTV V
Sbjct: 354 AEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLE--GEGY---FIAPTVFTEV 407
Query: 351 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 410
++ QEE FGP++ +++ E +++AND+ YGL V+S + + G
Sbjct: 408 PPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVG 467
Query: 411 VAAINDFASNYMCQSLPFGGVKDSGFGRFAG-VEGLRACCLVKSVVED 457
N + + PFGG K SG G ++ LR +K+V E
Sbjct: 468 NLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 286 bits (735), Expect = 2e-91
Identities = 122/450 (27%), Positives = 201/450 (44%), Gaps = 17/450 (3%)
Query: 13 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 72
+++ E V +AR A + R Q L L + I E ++ + + D K +A
Sbjct: 18 SKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYY 77
Query: 73 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 132
E++ E+I +++ + +W E + + PLGVV I +WNYPF+
Sbjct: 78 EEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLT 137
Query: 133 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEAL 192
PM+ A+ +GN +V+K SE + II L ++L VI G L
Sbjct: 138 IQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYL-----DKDLYPVINGGVPETTEL 192
Query: 193 VSS-VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAA 251
+ D I++ GS GVG++IM A+K LTPVTLELGGK V + D+ +
Sbjct: 193 LKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGK 252
Query: 252 LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 311
+SGQ C + I V ++ K +K + D G + H +++
Sbjct: 253 FMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSR-DYGRIISARHFQRVM 311
Query: 312 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 371
L+ +G ++ G+ A +Y PT++ +V+ +MQEE FGP++PI+
Sbjct: 312 GLI-----EGQKVAYGGTG-----DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCV 361
Query: 372 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGV 431
+ EE ++ N L +FS + +++ A+ G A ND + SLPFGGV
Sbjct: 362 RSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGV 421
Query: 432 KDSGFGRFAGVEGLRACCLVKSVVEDRWWP 461
+SG G + G + +S +
Sbjct: 422 GNSGMGSYHGKKSFETFSHRRSCLVRPLMN 451
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 286 bits (735), Expect = 2e-91
Identities = 135/454 (29%), Positives = 212/454 (46%), Gaps = 35/454 (7%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
LG P + E + A +A W + K+R LR ++EHQ+ + + + +
Sbjct: 38 LGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQ 97
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEFHPLGVV 119
GK + +A GEI I W EG+ R G K+ V P+GV
Sbjct: 98 GKPLAEA-KGEISYAASFIEWFAEEGK-------RIYGDTIPGHQADKRLIVIKQPIGVT 149
Query: 120 GAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA-VGAP 175
AI WN+P I P LAA G +V+K + +S + A LA G P
Sbjct: 150 AAITPWNFPAAMITRKAGPALAA---GCTMVLKPASQTPFSA-----LALAELAIRAGVP 201
Query: 176 ENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 232
+ +V+TG A G L S+ V K+ F GS +GR +M +K + V+LELGG F
Sbjct: 202 AGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPF 261
Query: 233 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 292
IV DD D+ + A+ + +++GQ C A R YV +Y F ++ + + + G L
Sbjct: 262 IVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGL 321
Query: 293 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 352
+G L + K++ + DAL+KGA ++ G +F PT++V+V
Sbjct: 322 DNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGG----NFFQPTILVDVPA 377
Query: 353 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 412
K+ +EE FGP+ P+ +F + +V+ AND+ +GL ++ R + ++ G+
Sbjct: 378 NAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIV 437
Query: 413 AIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 445
IN SN + PFGG+K SG GR G+
Sbjct: 438 GINTGIISNEVA---PFGGIKASGLGREGSKYGI 468
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 287 bits (736), Expect = 3e-91
Identities = 129/454 (28%), Positives = 207/454 (45%), Gaps = 34/454 (7%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+ P++ +V V + A ++ + RR++L + + E++E I I +
Sbjct: 40 IAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEH 99
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEFHPLGVV 119
GK +A GE+ + V + P+GV
Sbjct: 100 GKPWKEA-QGEVDYAAGFFDYCAKHIS-------ALDSHTIPEKPKDCTWTVHYRPVGVT 151
Query: 120 GAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA-VGAP 175
G IV WN+P I + LAA G VIK + + I ++ + P
Sbjct: 152 GLIVPWNFPIGMIAKKLSAALAA---GCPSVIKPASETPLTM-----IAFFSVMDKLDLP 203
Query: 176 ENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 232
+ +V+++ G A G+ L V + F GS VGR ++ + ++ + + LELGG F
Sbjct: 204 DGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPF 263
Query: 233 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 292
IV DD D+ A + + GQ C A R +VH + F ++A+ V ++ G +
Sbjct: 264 IVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGM 323
Query: 293 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 352
D+G L + +K++ + DALDKGA ++A L +G +FPPTV+ V+
Sbjct: 324 NDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDG---LFFPPTVVQGVDR 380
Query: 353 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 412
M QEE FGP++P+ F T+EEV+ ND+ +GL VF+ RA+ +AA ++ G
Sbjct: 381 EMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHV 440
Query: 413 AIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 445
N PFGG+K SG GR G+EGL
Sbjct: 441 GWNTGTGPTPEA---PFGGMKASGIGREGGLEGL 471
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 285 bits (731), Expect = 8e-91
Identities = 143/454 (31%), Positives = 221/454 (48%), Gaps = 35/454 (7%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
LG P + AE + A+ A W + K+R LR +I + + + I + +
Sbjct: 41 LGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQ 100
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEFHPLGVV 119
GK + +A GEI I W EG+ R +G +K+ V P+GV
Sbjct: 101 GKPLAEA-KGEIAYAASFIEWFAEEGK-------RVAGDTLPTPDANKRIVVVKEPIGVC 152
Query: 120 GAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA-VGAP 175
AI WN+P I P LAA G IV+K +E+ +S + A LA G P
Sbjct: 153 AAITPWNFPAAMIARKVGPALAA---GCPIVVKPAESTPFSA-----LAMAFLAERAGVP 204
Query: 176 ENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 232
+ ++ V+ G G + S+ V K+ F GS VGR++M ++ T+ +TLELGG F
Sbjct: 205 KGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPF 264
Query: 233 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 292
IV DD D+ + A+ + +++GQ C RF+VH +Y F ++A V + G
Sbjct: 265 IVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGT 324
Query: 293 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 352
+G L +K+++ + DAL KGA ++ G L +F PTV+ V
Sbjct: 325 ESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGH----GFFEPTVLTGVKP 380
Query: 353 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 412
M + +EE FGP+ P+ +F ++EE+V+LAND+ +GL ++S R +A ++ G+
Sbjct: 381 DMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMV 440
Query: 413 AIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 445
IN SN + PFGGVK SG GR G+
Sbjct: 441 GINTGLISNEVA---PFGGVKQSGLGREGSHYGI 471
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 282 bits (724), Expect = 2e-89
Identities = 136/454 (29%), Positives = 218/454 (48%), Gaps = 37/454 (8%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+G P+LS A + E + + KA WA + K+R LR II + + I I + +
Sbjct: 61 IGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQ 120
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEFHPLGVV 119
GK + +A GE++ I W E + R G ++ V P+GV
Sbjct: 121 GKPLAEA-RGEVLYAASFIEWFAEEAK-------RVYGDTIPAPQNGQRLTVIRQPVGVT 172
Query: 120 GAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA-VGAP 175
AI WN+P I P LAA G ++++ ++ + + LA G P
Sbjct: 173 AAITPWNFPAAMITRKAAPALAA---GCTMIVRPADLTPLTA-----LALGVLAEKAGIP 224
Query: 176 ENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 232
++ ++TG A E G L S+ V K+ F GS VGR++M + T+ ++LELGG F
Sbjct: 225 AGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPF 284
Query: 233 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 292
IV DD D+ A+ + +++GQ C A R YV R +Y F ++A VK + G
Sbjct: 285 IVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGT 344
Query: 293 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 352
+G + + K++ + DA+ KGA+++ G G +F P ++ V
Sbjct: 345 EPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGK----ELGG--LFFEPGILTGVTS 398
Query: 353 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 412
M + +EE FGP+ P+ F+T+EEV+ AND+ +GL ++ + RA ++ ++ G+
Sbjct: 399 DMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMV 458
Query: 413 AIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 445
N SN + PFGGVK SG GR G+
Sbjct: 459 GHNTGLISNEVA---PFGGVKQSGLGREGSKYGI 489
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 281 bits (722), Expect = 2e-89
Identities = 135/458 (29%), Positives = 217/458 (47%), Gaps = 39/458 (8%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
LG E V A +A W + S K+R LR +I++++ + I + ++
Sbjct: 39 LGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAES 98
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEFHPLGVV 119
GK + +A GEI+ + + W E R G ++A V P+GV
Sbjct: 99 GKPLKEA-HGEILYSAFFLEWFSEEAR-------RVYGDIIHTPAKDRRALVLKQPIGVA 150
Query: 120 GAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA-VGAP 175
I WN+P I LAA G +V+K +E+ +S + A LA+ G P
Sbjct: 151 AVITPWNFPSAMITRKVGAALAA---GCTVVVKPAEDTPFSA-----LALAELASQAGIP 202
Query: 176 ENLVDVITGF----AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 229
+ +VI E GEA+ + V KI F GS G++++ +A+ ++ V++ELGG
Sbjct: 203 SGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGL 262
Query: 230 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ-VAKIVKSVSA 288
FIV D +V A+ + +++GQ C + +F V R I+ FV + K++
Sbjct: 263 APFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRV 322
Query: 289 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 348
G G L + EK++ VNDA+ KGA ++ G L + +F PT++
Sbjct: 323 GNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGK----NFFEPTLLC 378
Query: 349 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 408
NV M EE FGP+ P++KF+T+EE + +AN + GL +S + +A Q++
Sbjct: 379 NVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLE 438
Query: 409 CGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 445
G+ +N+ S+ C PFGGVK SG GR G+
Sbjct: 439 VGMVGVNEGLISSVEC---PFGGVKQSGLGREGSKYGI 473
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 277 bits (710), Expect = 5e-88
Identities = 121/448 (27%), Positives = 186/448 (41%), Gaps = 20/448 (4%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
S A++D + + A + R+Q L L + +I ++E + + D GK
Sbjct: 26 SPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85
Query: 71 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 130
L EI +I + L+ ++W+ P S + + V P GV I +NYP +
Sbjct: 86 DLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVN 145
Query: 131 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGE 190
P++ A+ GN +IK SE + +II A V VI G +
Sbjct: 146 LTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAF-----APEYVAVIQGGRDENS 200
Query: 191 ALVSS-VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR 249
L+S D I F GSP VG+++M+ A+K LTPV LELGGK IV D D+ +
Sbjct: 201 HLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMF 260
Query: 250 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 309
+SGQ + YVH + + ++ + VK+ G L ++
Sbjct: 261 GKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPEIN-----STGKLVTERQVQR 315
Query: 310 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 369
L +L+ ++L + TV+ V LM EE FGPI+P++
Sbjct: 316 LVSLLEAT---QGQVLVGSQA-----DVSKRALSATVVDGVEWNDPLMSEELFGPILPVL 367
Query: 370 KFNTDEEVVKLANDSR-YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPF 428
+F++ + N L VF A+ I QIQ G A +N + LPF
Sbjct: 368 EFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPF 427
Query: 429 GGVKDSGFGRFAGVEGLRACCLVKSVVE 456
GG+ SG G + G KSV
Sbjct: 428 GGIGASGMGEYHGHFSYLTFTHKKSVRI 455
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 263 bits (674), Expect = 5e-78
Identities = 105/451 (23%), Positives = 183/451 (40%), Gaps = 30/451 (6%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
LG EV + +A A+ A W + + R ++L + + + +
Sbjct: 559 LGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEI 618
Query: 64 GKTMVDASLGEIMTTCEKITWLL---SEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
GK A ++ E I +L E + +P+ + + P GV
Sbjct: 619 GKQWDQA-YADV---TEAIDFLEYYAREMIRLGQPQRVGHAPG---ELNHYFYEPKGVAA 671
Query: 121 AIVSWNYPFHNIFN-PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLV 179
I WN+P I AA+ +GN +V K S S G + + A G PE +
Sbjct: 672 VIAPWNFPL-AISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREA----GLPEGVF 726
Query: 180 DVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT------LTPVTLELGGKD 230
+ G + G+ LV + I F GS G I+ A+K + + E+GGK+
Sbjct: 727 NFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKN 786
Query: 231 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 290
A I+ DD D+ + +A GQ C+ R V +Y F+ ++ + K+ GP
Sbjct: 787 AIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGP 846
Query: 291 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 350
MGA+ + + ++ +G + EG + P T+I +
Sbjct: 847 SEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPV--PAGEG---YFVPMTIIGGI 901
Query: 351 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 410
++ QEE FGP++ +M+ ++ ++ AN +++ L +FS S + + + G
Sbjct: 902 KPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVG 961
Query: 411 VAAINDFASNYMCQSLPFGGVKDSGFGRFAG 441
IN + + + PFGG + SG G AG
Sbjct: 962 NLYINRNNTGALVERQPFGGARMSGVGTKAG 992
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 244 bits (624), Expect = 1e-74
Identities = 73/471 (15%), Positives = 152/471 (32%), Gaps = 54/471 (11%)
Query: 7 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKT 66
FP + EV++ A K + + + + +R LR + + + I + +T
Sbjct: 24 FPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALP 83
Query: 67 MVDASLGEIMTT----------CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL 116
V + GEI T ++ + + P + I + L
Sbjct: 84 EVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPN-PTRAPLPKPDIR----RQQIAL 137
Query: 117 GVVGAIVSWNYPFHNI-----FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 171
G V + N+P LAA G +++K + I+ AL
Sbjct: 138 GPVAVFGASNFPLAFSAAGGDTASALAA---GCPVIVKGHTAHPGTSQIVAECIEQALKQ 194
Query: 172 VGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVT--LEL 226
P+ + ++ G G+ALVS + + F GS G GR + A + P+ EL
Sbjct: 195 EQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGEL 254
Query: 227 GGKDAFIVCDDVDV--PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYA-LFVSQVAKIV 283
G + + +A V + GQ C + F+ ++
Sbjct: 255 GAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLI 314
Query: 284 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 343
+ S + + ++ + D G ++ + A+ +
Sbjct: 315 RQQSPST------LLTPGIRDSYQSQVVSR---GSDDGIDVTFSQAESPCVASAL--FVT 363
Query: 344 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ--HRAR 401
+ + +EE FGP I+ +++ L+ L + + + +
Sbjct: 364 SSENWRKHP---AWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVS 420
Query: 402 EIAAQIQ--CGVAAINDFASNYM-CQSLPFGGVKDS---GFGRFAGVEGLR 446
++ +++ G N + + ++ GG + G E +
Sbjct: 421 QLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIH 471
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 245 bits (626), Expect = 2e-71
Identities = 104/451 (23%), Positives = 172/451 (38%), Gaps = 29/451 (6%)
Query: 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISS 60
L + + VA AR W+++ R L + +
Sbjct: 538 TGDLKPIADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQ 597
Query: 61 RDTGKTMVDASLGEIMTTCEKITWL---LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 117
R+ GKT+ DA L E+ E + ++G K E G + + G
Sbjct: 598 REGGKTLDDA-LSEL---REAADFCRYYAAQGRKLFGSETAMPGPTGESNA--LTMRGRG 651
Query: 118 VVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 177
V AI WN+P + AA+ +GN +V K +E ++ A G P++
Sbjct: 652 VFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEA----GIPKS 707
Query: 178 LVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT---LTPVTLELGGKDAF 232
+ ++TG G AL + + ++F GS V R I R + + P+ E GG +A
Sbjct: 708 ALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAM 767
Query: 233 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 292
I VA V +A +S+GQ C+ +V D+ + VA + + G P
Sbjct: 768 IADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPS 827
Query: 293 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 352
+G + +E ++L + + A G EG + P +
Sbjct: 828 DVATHVGPVIDVEAKQRLDAHIARMKTEARLHFA----GPAPEG---CFVAPHIFELTEA 880
Query: 353 TMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 410
+ EE FGPI+ ++++ + E V++ + YGL V S I ++Q G
Sbjct: 881 GQ--LTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVG 938
Query: 411 VAAINDFASNYMCQSLPFGGVKDSGFGRFAG 441
+N + PFGG SG G AG
Sbjct: 939 NIYVNRNMIGAVVGVQPFGGNGLSGTGPKAG 969
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 229 bits (586), Expect = 1e-69
Identities = 74/439 (16%), Positives = 145/439 (33%), Gaps = 36/439 (8%)
Query: 10 LSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVD 69
S EV + A KAQK A S +Q ++ + +E + +++ +TG +
Sbjct: 9 RSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQ 68
Query: 70 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPF 129
+ + + + + + + + + + + M PLGVV ++ P
Sbjct: 69 DKVIKNVFASKHVYNYIKDMKTIGMLKEDNEKKVMEVAV------PLGVVAGLIPSTNPT 122
Query: 130 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ET 188
+ L ++ +GN IV NA + RII A G P+ + +T +
Sbjct: 123 STVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQG 182
Query: 189 GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 246
+ L+ I+ G + + + TP G + ++P +
Sbjct: 183 TDQLMKHKDTAVILATGGSAMVKAAYSSG----TPAIGVGPGNGPAFIERSANIPRAVKH 238
Query: 247 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 306
+ + +G CA + V R +A+ K + A +G L +
Sbjct: 239 ILDSKTFDNGTICASEQSVVVERVNKEAV---IAEFRKQGAHFLSDAEAVQLGKFILRPN 295
Query: 307 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 366
+V ++ A + + A T V + +E+ PI+
Sbjct: 296 GSMNPAIVGKSVQHIANLAGLT----VPADARVLIAEET---KVGAKIPYSREK-LAPIL 347
Query: 367 PIMKFNTDEEVVKLANDSRY----GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 422
T +E +L+ D Y G + S + RE A + +N
Sbjct: 348 AFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVN------- 400
Query: 423 CQSLPFGGVKDSGFGRFAG 441
GG+ + A
Sbjct: 401 -TPGALGGIGATTNLVPAL 418
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 229 bits (587), Expect = 4e-69
Identities = 87/468 (18%), Positives = 146/468 (31%), Gaps = 56/468 (11%)
Query: 7 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKT 66
F + V+ A +A + SS K+R FLR + I E I EI S++TG
Sbjct: 57 FAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLP 116
Query: 67 MVDASLGEIMTTCEKITWLLSEGEK--WLK-------PEYRSSGRSMIHKKAKVEFHPLG 117
+ GE T ++ EK +L PE + + R I ++ P+G
Sbjct: 117 EARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEI----RLVQRPVG 171
Query: 118 VVGAIVSWNYPFHNI-----FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 172
V + N+P LAA G +V+K +G + AA+
Sbjct: 172 PVAVFGASNFPLAFSTAGGDTAAALAA---GCPVVVKGHSAHPGTGEIVAEAVDAAIRKT 228
Query: 173 GAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPV--TLELG 227
G + +I G + + G ALV + + F GS GR + + P+ ELG
Sbjct: 229 GVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELG 288
Query: 228 GKDAFIVCDDVDVPHVAQIA---VRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIV 283
+ + + + + +GQ C V F + + +
Sbjct: 289 SVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEAL 348
Query: 284 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 343
V+ L A + L S G
Sbjct: 349 AKVAPQTMLTDGIAKA---------YRDGQARFATRNAVKPLLATE----SSGRDASPNL 395
Query: 344 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS----QHR 399
+ EE FGP+ +++ + E+ +LA + L + + R
Sbjct: 396 FETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETAR 455
Query: 400 AREIAAQIQCGVAAINDF-----ASNYMCQSLPFGGVKDSGFGRFAGV 442
+ + G +N F + M G S V
Sbjct: 456 RLRPVLERKAGRVLVNGFPTGVEVVDSMV---HGGPYPASTNFGATSV 500
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 220 bits (562), Expect = 3e-66
Identities = 70/442 (15%), Positives = 154/442 (34%), Gaps = 51/442 (11%)
Query: 8 PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
P + AE+D +A+ +KAQ+ +A S +Q + R + + + + + ++G +
Sbjct: 2 PVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGI 61
Query: 68 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 127
V+ + + E I ++ A+ P+G++ IV
Sbjct: 62 VEDKVIKNHFASEFI--YNKYKDEQTCGILEEDDNLGTMTIAE----PVGIICGIVPTTN 115
Query: 128 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA- 186
P L ++ + NGI+ A S +++ A A GAP++++ I +
Sbjct: 116 PTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSV 175
Query: 187 ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVA 244
E AL+ + I+ G PG+ + + P G ++ + D+
Sbjct: 176 ELSNALMKHDDIALILATGGPGMVKAAY----SSGKPAIGVGAGNVPVVIDETADIKRAV 231
Query: 245 QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 304
+ + +G CA + V ++Y + A + +
Sbjct: 232 ASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFAS-----------HKAH----VLSK 276
Query: 305 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGA---VDQ---YFPPTVIVNVNHTMKLMQ 358
++K++ ++ A+I+ + ++E A V + V++
Sbjct: 277 TDADKVRKVLLIDGALNAKIVGQ-PATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH 335
Query: 359 EEAFGPIMPIMKFNTDEEVVKLA----NDSRYGLGCAVFSGSQ---HRAREIAAQIQCGV 411
E+ P + + + + E+ V A G +++ R R +++
Sbjct: 336 EK-LSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTAR 394
Query: 412 AAINDFASNYMCQSLPFGGVKD 433
IN GG+ D
Sbjct: 395 ILIN--------IPTTHGGIGD 408
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 190 bits (484), Expect = 1e-54
Identities = 109/472 (23%), Positives = 202/472 (42%), Gaps = 49/472 (10%)
Query: 8 PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY---IIEHQELICEISSRDTG 64
P ++ ++D A +A K W+K + +R RIL + + +H+E + + + + G
Sbjct: 38 PISTKEDIDYAAQTAAEAFKTWSKVAVPRR---ARILFNFQQLLSQHKEELAHLITIENG 94
Query: 65 KTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSS-GRSMIHKKAKVEFHPLGVVGAIV 123
K +A LGE+ E + + + + +S + +A +P+GVVG I
Sbjct: 95 KNTKEA-LGEVGRGIENVEFAAGAPS-LMMGDSLASIATDV---EAANYRYPIGVVGGIA 149
Query: 124 SWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
+N+P + PM A+ GN ++K SE + + A G P+ + +
Sbjct: 150 PFNFPMM-VPCWMFPM--AIALGNTFILKPSERTPLLTEKLVELFEKA----GLPKGVFN 202
Query: 181 VITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238
V+ G + ++ + I FVGS VG + + S+ L V G K+ IV +D
Sbjct: 203 VVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLNDA 262
Query: 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 298
++ V AA S+G+ C V I F++++ + V + G L +
Sbjct: 263 NLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDGVFL 322
Query: 299 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP-PTVIVNVNHTMKLM 357
G + ++ ++ + + L++GA ++ G + D YF PT+ NV M +
Sbjct: 323 GPVIREDNKKRTLSYIEKGLEEGARLVCDGR----ENVSDDGYFVGPTIFDNVTTEMTIW 378
Query: 358 QEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN-- 415
++E F P++ +++ +E +++AN S + G +F+ + + R I G+ IN
Sbjct: 379 KDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLG 438
Query: 416 ------DFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVVEDRW 459
F PF G K S FG G + + K V R+
Sbjct: 439 VPAPMAFF---------PFSGWKSSFFGTLHANGKDSVDFYTRKKVVTA-RY 480
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 187 bits (477), Expect = 2e-53
Identities = 107/478 (22%), Positives = 208/478 (43%), Gaps = 57/478 (11%)
Query: 8 PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY---IIEHQELICEISSRDTG 64
S A++ V A+ AQ WA ++ ++R R+ +K+ + ++ + E+ SR+ G
Sbjct: 59 ALASDADLAAAVESAKAAQPKWAATNPQRR---ARVFMKFVQLLNDNMNELAEMLSREHG 115
Query: 65 KTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSS-GRSMIHKKAKVEFHPLGVVGAIV 123
KT+ DA G+I+ E +++ K E+ G + P+G+ I
Sbjct: 116 KTIDDA-KGDIVRGLEVCEFVIGIPH-LQKSEFTEGAGPGI---DMYSIRQPVGIGAGIT 170
Query: 124 SWNYP-------FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 176
+N+P F A+ GN ++K SE ++ A G P
Sbjct: 171 PFNFPGMIPMWMF-----AP--AIACGNAFILKPSERDPSVPIRLAELMIEA----GLPA 219
Query: 177 NLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 234
+++V+ G +A+++ + + FVGS + R + A+ G K+ I+
Sbjct: 220 GILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMII 279
Query: 235 CDDVDVPHVAQIAVRAALQSSGQNC-AGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 293
D D+ A + A S+G+ C A + V + + ++ +V+S+ GP
Sbjct: 280 MPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTD 339
Query: 294 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP-PTVIVNVNH 352
K DMG + E +++++L++ +++GA+++ G +G + +F + +V
Sbjct: 340 EKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGR-DFKLQGYENGHFIGGCLFDDVTP 398
Query: 353 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 412
M + + E FGP++ +++ EE + L YG G A+++ AR+ A++I G+
Sbjct: 399 DMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMV 458
Query: 413 AINDFASNYMCQSLP---------FGGVKDSGFG--RFAGVEGLRACCLVKSVVEDRW 459
+N +P FGG K S FG G + ++ K++ RW
Sbjct: 459 GVN----------VPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITS-RW 505
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 179 bits (457), Expect = 4e-50
Identities = 101/463 (21%), Positives = 181/463 (39%), Gaps = 45/463 (9%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK----YIIEHQELICEIS 59
+ F +A ++ + A A+K W R ++ LK + + +
Sbjct: 91 VAKFCYADKALLNRAIDAALAARKEWDLKPMADR---AQVFLKAADMLSGPRRAEVLAKT 147
Query: 60 SRDTGKTMVDASLGEIMTTCEKITWL---LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL 116
GKT++ A + E I + + + S S + L
Sbjct: 148 MVGQGKTVIQAEIDAA---AELIDFFRFNAKFAVELEGEQPISVPPS----TNHTVYRGL 200
Query: 117 -GVVGAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 174
G V AI +N F I N A GN ++ K S+ A + +RI++ A G
Sbjct: 201 EGFVAAISPFN--FTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREA----GL 254
Query: 175 PENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNAS------KTLTPVTLE 225
P N++ + T G+ + SS + I F GS + + R + +T + E
Sbjct: 255 PPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGE 314
Query: 226 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 285
GGK+ V DV V +R+A + GQ C+ R YV + ++ ++ +
Sbjct: 315 CGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSR 374
Query: 286 VSAGPPLAG-KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-P 343
+ G P A+ + +++ + A + + G + S G Y+
Sbjct: 375 IKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVG----YYVE 430
Query: 344 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLAND-SRYGLGCAVFSGSQHRA 400
P +I + + +M+EE FGP++ + + D E +KL + + YGL AVF+ +
Sbjct: 431 PCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIV 490
Query: 401 REIAAQIQCGV--AAINDFASNYMCQSLPFGGVKDSGFGRFAG 441
+E ++ IND ++ + PFGG + SG G
Sbjct: 491 QEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPG 533
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 5e-06
Identities = 56/436 (12%), Positives = 123/436 (28%), Gaps = 106/436 (24%)
Query: 8 PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
LS+ E+D + R F +L K + M
Sbjct: 44 SILSKEEIDHIIMSKDAVSGT--------LRLFWTLLSK-----------------QEEM 78
Query: 68 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN- 126
V + E++ +L+S +K E R SM+ + + L +N
Sbjct: 79 VQKFVEEVLRI--NYKFLMSP----IKTEQR--QPSMMTRMYIEQRDRL--------YND 122
Query: 127 ---YPFHNIFNP--------MLAAVFSGNGIVI-------K------VSENASWSGCFYF 162
+ +N+ L + ++I K V + F
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF 182
Query: 163 RIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMR--NASKTLT 220
+I L +PE +++++ + L+ +D S + +R + L
Sbjct: 183 KIFWLNLKNCNSPETVLEML-------QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR 235
Query: 221 PVTLELGGKDAFIVCDDV-DVPHVA------QIAV--R-AALQSSGQNCAGAERFYVH-- 268
+ ++ +V +V + +I + R + H
Sbjct: 236 RLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHS 295
Query: 269 --------RDIYALFVSQ-VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 319
+ + ++ + + V P + A + + N + D
Sbjct: 296 MTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRR--LSIIAESIRDGLATWDNWKHVNCD 353
Query: 320 KGAEILARGSFGHLSEGAVDQYFPPTVI--VNVNHTMKLMQ----EEAFGPIMPIM-KFN 372
K I+ S L + F + + + L+ + +M ++ K +
Sbjct: 354 KLTTIIES-SLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLH 412
Query: 373 TDEEVVKLANDSRYGL 388
V K +S +
Sbjct: 413 KYSLVEKQPKESTISI 428
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} Length = 463 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 1e-05
Identities = 53/290 (18%), Positives = 101/290 (34%), Gaps = 57/290 (19%)
Query: 13 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRD-------TGK 65
V+++ AR ++ A +QR + + L + + ++ I + +D
Sbjct: 29 PTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAA 88
Query: 66 TMVD------ASLGEIMTTCEKITWLLSE--GEKWLKPEYRSSGRSMIHKKAKVEFHPLG 117
++ + L + +I + G L+ + + ++ V P+G
Sbjct: 89 PLLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRV-LRRTRIAKN--LELEQVTV---PIG 142
Query: 118 VVGAI------VSWNYPFHNIFNPMLAAVF---SGNGIVIKVSENASWSGCFYFRIIQAA 168
V+ I A SGNG+++K + A+ S + Q A
Sbjct: 143 VLLVIFESRPDCLPQ-----------VAALAIASGNGLLLKGGKEAAHSNRILHLLTQEA 191
Query: 169 LAAVGAPENLVDVITGFAETGE--ALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 226
L+ G E V ++ E + L +D II GS + R I + A PV
Sbjct: 192 LSIHGVKE-AVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAA--KGIPVMGHS 248
Query: 227 GGKDAFIVC-----DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 271
G +C + V V ++ + + C E +HRD+
Sbjct: 249 EG-----ICHMYVDSEASVDKVTRLVRDSKCEYPAA-CNALETLLIHRDL 292
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 522 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 97.06 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 96.61 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-102 Score=823.19 Aligned_cols=448 Identities=29% Similarity=0.466 Sum_probs=417.6
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+|+++++++|++|++.|+++|..+|.++|++++++|++++++|++++++|+||+..+++..|+..+++
T Consensus 32 g~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~ 111 (490)
T 2wme_A 32 GEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGAD 111 (490)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999997667999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|++...+++.... .+. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 112 ~~~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~ 187 (490)
T 2wme_A 112 VLEYYAGLVPAIEGEQ-IPL---RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALK 187 (490)
T ss_dssp HHHHHHHHGGGCCEEE-EEE---ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHH
T ss_pred HHHHHHhccccccCcc-ccc---cCCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHH
Confidence 9999998877653322 111 124567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHH-HHhcCCCceeeeCCCcceEEEcC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR-NASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~-~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
+++++. ++|+|+|++|+|+|++ +.++.|++ .+|+|+||||+.+|+.|++ .+++++||+++|||||||+||++
T Consensus 188 l~~l~~----eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~ 263 (490)
T 2wme_A 188 LAEIYT----EAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFP 263 (490)
T ss_dssp HHHHHH----HHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECT
T ss_pred HHHHHH----HhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEcc
Confidence 888766 6899999999999975 78999987 8999999999999988876 56778999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++
T Consensus 264 dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~ 343 (490)
T 2wme_A 264 DADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIES 343 (490)
T ss_dssp TSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
++++|+++++||.+........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 344 a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d 423 (490)
T 2wme_A 344 GKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQD 423 (490)
T ss_dssp HHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSB
T ss_pred HHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCC
Confidence 99999999999987654444579999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
.++++++++++++|+|+||++... .+.+||||+|+||+|++||++||++||+.|+|+.+.
T Consensus 424 ~~~a~~~~~~l~aG~v~iN~~~~~--~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~ 483 (490)
T 2wme_A 424 LARAHRAIHRLEAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp HHHHHHHHHHSCCSEEEESCCSCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHHHCCeeEEEEeCCCCC--CCCCCcccccccccCchhHHHHHHHhhceeEEEEEC
Confidence 999999999999999999986543 356999999999999999999999999999998754
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-99 Score=798.54 Aligned_cols=443 Identities=26% Similarity=0.431 Sum_probs=418.7
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+++++++++|++|+..|++++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 14 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~ 92 (484)
T 3ros_A 14 NEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK-EEVELCVS 92 (484)
T ss_dssp TEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.+++|..+..... .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 93 ~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~ 168 (484)
T 3ros_A 93 ICNYYADHGPEMLKPTKLNS----DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAAL 168 (484)
T ss_dssp HHHHHHHHHHHHTSCEEECC----TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCCeeccC----CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence 99999999988877654322 24578899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcch-hhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~-~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++. ++|+|+|++|+|+|+++ .++ |+. ++|+|+||||+.+|+.|++.+++++||+++|||||||+||++|
T Consensus 169 l~~l~~----~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~d 243 (484)
T 3ros_A 169 TAKIIK----RAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDD 243 (484)
T ss_dssp HHHHHH----HHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECTT
T ss_pred HHHHHH----HhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCCC
Confidence 888765 67999999999999764 566 876 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++|+++
T Consensus 244 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a 323 (484)
T 3ros_A 244 ADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEA 323 (484)
T ss_dssp CCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 324 ~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 399 (484)
T 3ros_A 324 IDAGAKVFYQYPEI----DSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDI 399 (484)
T ss_dssp HHTTCEEEEECCCC----CCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCH
T ss_pred HHcCCeEEecCCcC----CCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCH
Confidence 99999999999742 35799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEccc
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 459 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~ 459 (522)
++++++++++++|+|+||++.. ..+.+||||+|.||+|++||++||++||+.|+|+.+..
T Consensus 400 ~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 400 DRAKKVSAQIETGMTVINGRWI--TSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp HHHHHHHHHSCSSCCEETSCCC--CCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGG
T ss_pred HHHHHHHHhCccceEEECCCCC--CCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCC
Confidence 9999999999999999999643 34579999999999999999999999999999988653
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-98 Score=796.19 Aligned_cols=441 Identities=28% Similarity=0.449 Sum_probs=417.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|++++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 22 g~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~ 100 (486)
T 3pqa_A 22 LEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQAR-VEVERSIG 100 (486)
T ss_dssp CCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.+++|.... .+.+ +...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+
T Consensus 101 ~~~~~a~~~~~~~~~~-~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 175 (486)
T 3pqa_A 101 TFKLAAFYVKEHRDEV-IPSD----DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIE 175 (486)
T ss_dssp HHHHHHHHHHHCCEEE-ECCT----TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHH
T ss_pred HHHHHHHHHHHhcCce-ecCC----CceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHH
Confidence 9999999988875432 2221 4567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++.+++.++|+|+|++++|+|++ +.+++|++ .+|+|+||||+.+|+.|++.++ +||+++|||||||+||++|
T Consensus 176 l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~~v~lELGGk~p~iV~~d 253 (486)
T 3pqa_A 176 LAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVNPNIVLKD 253 (486)
T ss_dssp HHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SSEEEEECCCCEEEEECTT
T ss_pred HHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CCceeeccCCcCcEEEcCC
Confidence 99999999999999999999999976 55899987 8999999999999999999888 8999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++|+++
T Consensus 254 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a 333 (486)
T 3pqa_A 254 ADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKA 333 (486)
T ss_dssp SCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||. ..|+|++|||+ +++++|++++||+||||++|++|+| ||||+++|+++|||++||||+|.
T Consensus 334 ~~~Ga~v~~gG~-------~~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~ 404 (486)
T 3pqa_A 334 IDEGGKLLLGGK-------RDKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDI 404 (486)
T ss_dssp HHTTCEEEECCC-------EETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBH
T ss_pred HHCCCEEEecCC-------CCCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCH
Confidence 999999999996 25899999999 9999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEccc
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 459 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~ 459 (522)
++++++++++++|+|+||++..+... .+||||+|+||+|++||++||++||+.|+|+.+..
T Consensus 405 ~~a~~~~~~l~aG~v~vN~~~~~~~~-~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~~ 465 (486)
T 3pqa_A 405 NKSLKFAENLEFGGVVINDSSLFRQD-NMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKA 465 (486)
T ss_dssp HHHHHHHHHSCSSEEEESSCTTCCCT-TSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC-
T ss_pred HHHHHHHHhCCcceEEEeCCCCcCCC-CCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcCC
Confidence 99999999999999999998664433 79999999999999999999999999999988653
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-98 Score=798.27 Aligned_cols=449 Identities=32% Similarity=0.505 Sum_probs=417.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH-----HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK-----VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 75 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~-----~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei 75 (522)
||++++++.++.+++++++++|++|+. .|+.++.++|.++|++++++|++++++|++++++|+||+..++. .|+
T Consensus 33 g~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev 111 (503)
T 3iwj_A 33 QNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAA-WDI 111 (503)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHH
Confidence 689999999999999999999999999 99999999999999999999999999999999999999999985 699
Q ss_pred HHHHHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCch
Q 009919 76 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 155 (522)
Q Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~ 155 (522)
..+++.+++++..++++......+......+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|
T Consensus 112 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp 191 (503)
T 3iwj_A 112 DDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELAS 191 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSC
T ss_pred HHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcch
Confidence 99999999999888776543322211111345678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceE
Q 009919 156 WSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 232 (522)
Q Consensus 156 ~~~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~ 232 (522)
+++..+++++. ++|+|+|++++|+|++ +.+++|+. ++|+|+||||+.+|+.|++.+++++||+++|||||||+
T Consensus 192 ~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~~v~lElGGk~p~ 267 (503)
T 3iwj_A 192 LTCLELGEICK----EVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPL 267 (503)
T ss_dssp HHHHHHHHHHH----HHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHHHHHGGGTCCEEEECCCCEEE
T ss_pred HHHHHHHHHHH----HhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHHHHHhcCCCCEEEECCCCCce
Confidence 99998888765 6899999999999965 77889987 89999999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHH
Q 009919 233 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN 312 (522)
Q Consensus 233 iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~ 312 (522)
||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.+
T Consensus 268 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~ 347 (503)
T 3iwj_A 268 VVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILK 347 (503)
T ss_dssp EECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHH
T ss_pred EEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEE
Q 009919 313 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 392 (522)
Q Consensus 313 ~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v 392 (522)
+|++++++|+++++||.... ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||
T Consensus 348 ~i~~a~~~Ga~v~~gG~~~~--~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v 425 (503)
T 3iwj_A 348 FVSNAKSEGATILTGGSRPE--HLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAV 425 (503)
T ss_dssp HHHHHHHTTCEEEECCSCCT--TCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEE
T ss_pred HHHHHHHCCCEEEecCCCCc--cCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEE
Confidence 99999999999999997432 1147999999999999999999999999999999999999999999999999999999
Q ss_pred ecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 393 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 393 ~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|++||.+||++||+.|+|+...
T Consensus 426 ~t~d~~~a~~~~~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~~~ 489 (503)
T 3iwj_A 426 ISNDLERCERVTKAFKAGIVWVNCSQP--CFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYI 489 (503)
T ss_dssp ECSCHHHHHHHHHHCCSSEEEESSSCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEEC
T ss_pred ECCCHHHHHHHHHhCCcceEEEcCCCC--CCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEEeC
Confidence 999999999999999999999998643 3457999999999999999999999999999998753
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-98 Score=794.73 Aligned_cols=449 Identities=28% Similarity=0.436 Sum_probs=412.0
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHcc
Q 009919 10 LSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEG 89 (522)
Q Consensus 10 ~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~ 89 (522)
.+.+++++++++|++|++.|+.++.++|.++|++++++|+++.++|++++++|+||+..++...|+..+++.++++++++
T Consensus 15 ~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 94 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKL 94 (469)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999997789999999999999988
Q ss_pred ccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHH
Q 009919 90 EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 169 (522)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l 169 (522)
.+|..+..........+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~-- 172 (469)
T 3sza_A 95 PEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ-- 172 (469)
T ss_dssp HHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred HhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH--
Confidence 888765543332222345678999999999999999999999999999999999999999999999999999998774
Q ss_pred HhcCCCCCcEeeecCcchhhhhHhc-CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHH
Q 009919 170 AAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 248 (522)
Q Consensus 170 ~~ag~p~g~v~vv~g~~~~~~~L~~-~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~ 248 (522)
+ +|+|++++|+|+.+.+..|+. .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.++
T Consensus 173 --a-lP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~ 249 (469)
T 3sza_A 173 --Y-LDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIA 249 (469)
T ss_dssp --H-SCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHH
T ss_pred --h-CCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHH
Confidence 4 899999999998777778888 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeecc
Q 009919 249 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 328 (522)
Q Consensus 249 ~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG 328 (522)
+++|.|+||.|++++|||||++++|+|+++|+++++++ .|+|.++++++|||+++++++++.+++ +|+++++||
T Consensus 250 ~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG 323 (469)
T 3sza_A 250 WGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGG 323 (469)
T ss_dssp HHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECC
T ss_pred HHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCC
Confidence 99999999999999999999999999999999999998 599988999999999999999999998 599999999
Q ss_pred CCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhc
Q 009919 329 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 408 (522)
Q Consensus 329 ~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~ 408 (522)
.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++
T Consensus 324 ~~-----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~ 398 (469)
T 3sza_A 324 TG-----DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETS 398 (469)
T ss_dssp CE-----ETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCC
T ss_pred cc-----CCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCC
Confidence 73 3468999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcccccccccCCCCCCCCCCCch
Q 009919 409 CGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAEN 478 (522)
Q Consensus 409 ~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~~~~~p~~~~ 478 (522)
+|+|+||++..+...+.+||||+|+||+|++||.+||++||+.|+|+.++++. ....+++|||+.+
T Consensus 399 ~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~~~----~~~~~~~yppy~~ 464 (469)
T 3sza_A 399 SGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMN----DEGLKVRYPPSPA 464 (469)
T ss_dssp CSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCSSC----CGGGGGGSSSCCC
T ss_pred cceEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECCccc----ccccccccCCCCc
Confidence 99999999876655678999999999999999999999999999999887641 1124578888643
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-97 Score=795.45 Aligned_cols=448 Identities=29% Similarity=0.487 Sum_probs=418.7
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHH--HHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQ--KVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~--~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
|+++++++.++.+++++++++|++|+ ..|++++.++|.++|++++++|+++.++|++++++|+||+..++. .|+..+
T Consensus 58 g~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~ 136 (520)
T 3ed6_A 58 QEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESY-ADMDDI 136 (520)
T ss_dssp TEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 68999999999999999999999999 889999999999999999999999999999999999999999996 699999
Q ss_pred HHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++.++|++..++++... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++
T Consensus 137 ~~~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~ 213 (520)
T 3ed6_A 137 HNVFMYFAGLADKDGGE-MIDSP--IPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTT 213 (520)
T ss_dssp HHHHHHHHHHTTSCCEE-EECCS--STTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHHhcCe-ecccC--CCCCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHH
Confidence 99999999988876542 22211 1245678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEc
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~ 235 (522)
.++++++. ++|+|+|+||+|+|++ +.++.|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||+
T Consensus 214 ~~l~~l~~----eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~ 289 (520)
T 3ed6_A 214 IRVFELME----EVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIF 289 (520)
T ss_dssp HHHHHHHH----HHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEEC
T ss_pred HHHHHHHH----HhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhcCCCEEEEcCCCCeeEEC
Confidence 98888765 6899999999999964 78899987 89999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 236 ~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
+|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus 290 ~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~ 369 (520)
T 3ed6_A 290 DDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMD 369 (520)
T ss_dssp TTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
+++++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 370 ~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~ 449 (520)
T 3ed6_A 370 VAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSK 449 (520)
T ss_dssp HHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECS
T ss_pred HHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECC
Confidence 99999999999998532111247999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
|.++++++++++++|+|+||++... .+.+||||+|+||+|+++|++||++||+.|+|+.+.
T Consensus 450 d~~~a~~~a~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~ 510 (520)
T 3ed6_A 450 DIGKAQRVANKLKLGTVWINDFHPY--FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNT 510 (520)
T ss_dssp CHHHHHHHHHHSCCSEEEESCSCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEES
T ss_pred CHHHHHHHHHHCCcceEEECCCCCC--CCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEcC
Confidence 9999999999999999999998665 356999999999999999999999999999998754
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-98 Score=796.54 Aligned_cols=445 Identities=28% Similarity=0.461 Sum_probs=418.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+.++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 37 g~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~ 115 (506)
T 3rh9_A 37 GSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAAG 115 (506)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999997 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEE-eeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEF-HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGC 159 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~ 159 (522)
.++++++.++++.... .+.. .+...++++ +|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 116 ~l~~~a~~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~ 191 (506)
T 3rh9_A 116 FFDYCAKHISALDSHT-IPEK---PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMI 191 (506)
T ss_dssp HHHHHHHHGGGGCCEE-CSCC---GGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHhcCcc-cccC---CCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHH
Confidence 9999999998886532 2221 345678888 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 160 FYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 160 ~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
++++++. ++|+|+|+||+|+|++ +.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++
T Consensus 192 ~l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l~~v~lElGGk~p~iV~~ 267 (506)
T 3rh9_A 192 AFFSVMD----KLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFD 267 (506)
T ss_dssp HHHHHHT----TTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTTTCEEEEECCCCCEEEECT
T ss_pred HHHHHHH----HhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhcCCceEEecCCCCceEECC
Confidence 8888765 7899999999999965 77899987 799999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++|++
T Consensus 268 dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~ 347 (506)
T 3rh9_A 268 DADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQD 347 (506)
T ss_dssp TSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
++++|+++++||...+ ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 348 a~~~Ga~v~~gG~~~~---~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d 424 (506)
T 3rh9_A 348 ALDKGASLVAGKQPAE---LGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTAD 424 (506)
T ss_dssp HHHTTCEEEESCCGGG---CCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSC
T ss_pred HHHCCCEEEecCCcCC---CCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 9999999999997421 1269999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEccc
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 459 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~ 459 (522)
.++++++++++++|+|+||++.... +.+||||+|.||+|++||++||++||+.|+|+.+..
T Consensus 425 ~~~a~~~~~~l~aG~V~vN~~~~~~--~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~~ 485 (506)
T 3rh9_A 425 AERAQRVAAGLRFGHVGWNTGTGPT--PEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFA 485 (506)
T ss_dssp HHHHHHHHHHCCCSEEEESCCCCCC--TTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC--
T ss_pred HHHHHHHHHhCCcceEEEcCCCCCC--CCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcCc
Confidence 9999999999999999999976543 469999999999999999999999999999987653
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-98 Score=795.28 Aligned_cols=448 Identities=28% Similarity=0.453 Sum_probs=416.8
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+.++.++|.++|++++++|+++.++|++++++|+||+..++. .|+..+++
T Consensus 38 g~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~ 116 (497)
T 3k2w_A 38 GKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAE-MEVDVTAT 116 (497)
T ss_dssp CSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.++++..... +.. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 117 ~~~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 193 (497)
T 3k2w_A 117 FIDYGCDNALTIEGDIL-PSD--NQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTE 193 (497)
T ss_dssp HHHHHHHTTTTCCEEEE-ECS--STTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHH
T ss_pred HHHHHHHHHHHhcCccc-ccC--CCCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence 99999999988765422 211 234567899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++. ++|+|+|+||+|+|++ +.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++|
T Consensus 194 l~~ll~----~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~d 269 (497)
T 3k2w_A 194 LGRIAK----EAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDD 269 (497)
T ss_dssp HHHHHH----HTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEEECCCCEEEEECTT
T ss_pred HHHHHH----HhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEEEcCCCCceEEcCC
Confidence 888765 7899999999999965 78899987 7999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++|+++
T Consensus 270 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a 349 (497)
T 3k2w_A 270 ADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEA 349 (497)
T ss_dssp CCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||..........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 350 ~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~ 429 (497)
T 3k2w_A 350 IKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSF 429 (497)
T ss_dssp HHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBH
T ss_pred HHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCH
Confidence 99999999999731111123689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
++++++++++++|+|+||++..+. +.+||||+|+||+|++||++||++||+.|+|+.+.
T Consensus 430 ~~a~~~~~~l~aG~v~vN~~~~~~--~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~ 488 (497)
T 3k2w_A 430 ANINQAISDLEVGEVYINRGMGEQ--HQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINE 488 (497)
T ss_dssp HHHHHHHHHCCSSEEEESCCSCCC--TTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHhCCeeEEEEcCCCCCC--CCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEc
Confidence 999999999999999999987653 56999999999999999999999999999998654
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-98 Score=798.42 Aligned_cols=444 Identities=29% Similarity=0.443 Sum_probs=414.4
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+.++.++|.++|++++++|++++++|++++++|+||+..++ |+..+++
T Consensus 40 g~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~~ 116 (517)
T 3r31_A 40 GEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQET---IVADPTS 116 (517)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999999999887 9999999
Q ss_pred HHHHHHHcccc---ccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHH
Q 009919 81 KITWLLSEGEK---WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 157 (522)
Q Consensus 81 ~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~ 157 (522)
.++++++.+++ |+..+..+.. .+. .+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|++
T Consensus 117 ~~~~~a~~~~~~~~~~~g~~~~~~---~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t 192 (517)
T 3r31_A 117 GADAFEFFGGIAPSALNGDYIPLG---GDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLG 192 (517)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEECS---SSE-EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSH
T ss_pred HHHHHHHHhhhccccccCcccccC---CCc-ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHH
Confidence 99999887765 3333332221 234 8899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEc
Q 009919 158 GCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235 (522)
Q Consensus 158 ~~~l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~ 235 (522)
+.++++++. ++|+|+|++++|+|+.+.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||+
T Consensus 193 ~~~l~~ll~----eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lElGGk~p~IV~ 268 (517)
T 3r31_A 193 ALKIAEILI----EAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVF 268 (517)
T ss_dssp HHHHHHHHH----HTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEEC
T ss_pred HHHHHHHHH----HhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHhhcCCCcEEEEcCCcCeEEEe
Confidence 998888765 689999999999996688999998 79999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 236 ~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
+|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++|+
T Consensus 269 ~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~ 348 (517)
T 3r31_A 269 DDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIE 348 (517)
T ss_dssp TTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
+++++|+++++|| .........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 349 ~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~ 427 (517)
T 3r31_A 349 KGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTA 427 (517)
T ss_dssp HHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECS
T ss_pred HHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeC
Confidence 9999999999999 421111347999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|++||++||+.|+|+...
T Consensus 428 d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 488 (517)
T 3r31_A 428 DLARAHRVVDGLEAGTLWINTYNL--CPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVST 488 (517)
T ss_dssp CHHHHHHHHHHSCCSEEEESSCCC--CCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEECC
T ss_pred CHHHHHHHHHHCCcceEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEcC
Confidence 999999999999999999999654 3457999999999999999999999999999998765
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-97 Score=795.42 Aligned_cols=448 Identities=22% Similarity=0.360 Sum_probs=415.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+.++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 52 g~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~ 130 (521)
T 4e4g_A 52 GEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGLE 130 (521)
T ss_dssp TEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHH-HHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999995 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|++..... +.....+. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+
T Consensus 131 ~l~~~a~~~~~-~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~ 207 (521)
T 4e4g_A 131 VCEFVIGIPHL-QKSEFTEG--AGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIR 207 (521)
T ss_dssp HHHHHHTHHHH-TCEEEEEE--EETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHH
T ss_pred HHHHHHHHHHH-hcCccccc--CCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHH
Confidence 99999875433 33222111 1123467899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+++++. ++|+|+|+|++|+|+.+.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++||
T Consensus 208 l~~l~~----eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dA 283 (521)
T 4e4g_A 208 LAELMI----EAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDA 283 (521)
T ss_dssp HHHHHH----HTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTS
T ss_pred HHHHHH----HhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCC
Confidence 888765 689999999999998788888987 79999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchh-hHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~-i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
|++.|++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++|+|.++++++||++++++++++.++|+++
T Consensus 284 Dl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a 363 (521)
T 4e4g_A 284 DLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSG 363 (521)
T ss_dssp CHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||.....+.+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 364 ~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~ 443 (521)
T 4e4g_A 364 IEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDG 443 (521)
T ss_dssp HHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBH
T ss_pred HHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCH
Confidence 99999999999753322335799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC--CcchHHHHHhchhceEEEEc
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G--~~~g~~~l~~ft~~k~v~~~ 457 (522)
++++++++++++|+|+||++.. ...+.+||||+|+||+| ++||++||++||+.|+|+.+
T Consensus 444 ~~a~~~~~~l~aG~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~ 504 (521)
T 4e4g_A 444 DAARDFASRINIGMVGVNVPIP-VPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSR 504 (521)
T ss_dssp HHHHHHHHHCCCSEEEESCSSC-CCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEEC
T ss_pred HHHHHHHHhCCeeeEEECCCCC-CCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEe
Confidence 9999999999999999999753 33456999999999999 79999999999999999864
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-97 Score=789.89 Aligned_cols=442 Identities=30% Similarity=0.523 Sum_probs=413.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+.++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 38 g~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 116 (484)
T 3ifg_A 38 GESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAAS 116 (484)
T ss_dssp CCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999985 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|++...+++... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 117 ~l~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~ 193 (484)
T 3ifg_A 117 FIEWFAEEGKRVAGD-TLPTP--DANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALA 193 (484)
T ss_dssp HHHHHHHHHTTCCEE-EECCS--STTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHhhcCc-ccccc--CCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHH
Confidence 999998876654321 11111 124567899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++. ++|+|+|+||+|+|++ +.+++|++ ++|+|+||||+.+|+.|++.+++++||+++|||||||+||++|
T Consensus 194 l~~l~~----~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~iV~~d 269 (484)
T 3ifg_A 194 MAFLAE----RAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFDD 269 (484)
T ss_dssp HHHHHH----HHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGTCEEEEECCCCCEEEECTT
T ss_pred HHHHHH----HhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccCCceEEecCCCCeEEECCC
Confidence 888765 6899999999999965 77899987 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|+++
T Consensus 270 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a 349 (484)
T 3ifg_A 270 ADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADA 349 (484)
T ss_dssp SCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 350 ~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 425 (484)
T 3ifg_A 350 LAKGASLMTGGKRH----ALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDI 425 (484)
T ss_dssp HHTTCEEEECCSBC----TTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBH
T ss_pred HHCCCEEEECCCcc----CCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCH
Confidence 99999999999742 23699999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
++++++++++++|+|+||+... ..+.+||||+|+||+|++||++||++||+.|+|+.
T Consensus 426 ~~a~~~~~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~ 482 (484)
T 3ifg_A 426 GRVWRVAEALEYGMVGINTGLI--SNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCV 482 (484)
T ss_dssp HHHHHHHHHCCCSEEEESCSCC--CCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEE
T ss_pred HHHHHHHHhCCcceEEEcCCCC--CCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEE
Confidence 9999999999999999998533 34579999999999999999999999999999875
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-97 Score=791.41 Aligned_cols=441 Identities=31% Similarity=0.483 Sum_probs=412.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+.++.++|.++|++++++|+++.++|++++++|+||+..++. .|+..+++
T Consensus 37 g~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~ 115 (505)
T 3prl_A 37 GVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAI-GEVSRTAD 115 (505)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 59999999
Q ss_pred HHHHHHHccccccCcccccCCcccc---cccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMI---HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 157 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~ 157 (522)
.++++++.+.++.... .+...... +...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 116 ~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t 194 (505)
T 3prl_A 116 IIRHTADEALRLNGET-LKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLS 194 (505)
T ss_dssp HHHHHHHHHHTCCEEE-EEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHH
T ss_pred HHHHHHHHHHHhcCcc-ccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 9999999888765422 21111000 3457889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEE
Q 009919 158 GCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 234 (522)
Q Consensus 158 ~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV 234 (522)
+..+++++. ++|+|+|++++|+|++ +.+++|++ .+|+|+||||+.+|+.|++.++ +||+++|||||||+||
T Consensus 195 a~~l~~ll~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV 268 (505)
T 3prl_A 195 GIKMVEALA----DAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVLELGGKDPAIV 268 (505)
T ss_dssp HHHHHHHHH----HTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCC--SSCEEEECCCCEEEEE
T ss_pred HHHHHHHHH----HhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHcc--CCcEEEECCCCCCCcc
Confidence 988887654 7899999999999964 77899987 8999999999999999999988 9999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i 314 (522)
++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|. +++++||++++++++++.++|
T Consensus 269 ~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~-~~~~~gpli~~~~~~rv~~~i 347 (505)
T 3prl_A 269 LDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLI 347 (505)
T ss_dssp CTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT-TTCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCC-CcCcCCcccCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEec
Q 009919 315 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 394 (522)
Q Consensus 315 ~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s 394 (522)
++++++|+++++||. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 348 ~~a~~~Ga~v~~gG~-------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t 420 (505)
T 3prl_A 348 DDALENGATLLSGNK-------RQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFT 420 (505)
T ss_dssp HHHHHTTCEEEECCC-------EETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEEC
T ss_pred HHHHHCCCEEEecCC-------CCCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEc
Confidence 999999999999997 3689999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 395 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 395 ~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
+|.++++++++++++|+|+||++... ..+.+||||+|+||+|++||++||++||+.|+|+.+.
T Consensus 421 ~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~ 483 (505)
T 3prl_A 421 KDTDRAINIGKHLEVGTVHINAKTER-GPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNL 483 (505)
T ss_dssp SCHHHHHHHHHTSCSSEEEESSCCCS-CSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred CCHHHHHHHHHHCCeeEEEEcCCCCC-CCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeC
Confidence 99999999999999999999998653 3457999999999999999999999999999998754
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-97 Score=791.03 Aligned_cols=441 Identities=29% Similarity=0.499 Sum_probs=413.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+||+..++. .|+..+++
T Consensus 58 g~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~ 136 (504)
T 3ek1_A 58 GSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEAR-GEVLYAAS 136 (504)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999985 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|++....++.... .+.. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 137 ~~~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~ 213 (504)
T 3ek1_A 137 FIEWFAEEAKRVYGDT-IPAP--QNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALA 213 (504)
T ss_dssp HHHHHHHHHTTCCEEE-ECCS--STTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHhcCcc-cccc--cccccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHH
Confidence 9999988776543221 1111 124567899999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.|++.+++++||+++|||||||+||++|
T Consensus 214 l~~l~~----eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~IV~~d 289 (504)
T 3ek1_A 214 LGVLAE----KAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDD 289 (504)
T ss_dssp HHHHHH----HTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCEEEEECTT
T ss_pred HHHHHH----HhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCCeEecCCCCCeeEEcCC
Confidence 887765 7899999999999865 77899987 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+++
T Consensus 290 ADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a 369 (504)
T 3ek1_A 290 ADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDA 369 (504)
T ss_dssp SCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 370 ~~~Ga~v~~gG~~------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 443 (504)
T 3ek1_A 370 VSKGAKLITGGKE------LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENF 443 (504)
T ss_dssp HHTTCEEEECCCE------EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBH
T ss_pred HHCCCEEEeCCcc------CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCH
Confidence 9999999999973 3689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
++++++++++++|+|+||+... ..+.+||||+|+||+|+++|++||++||+.|+|+..
T Consensus 444 ~~a~~~a~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~ 501 (504)
T 3ek1_A 444 SRAIRVSEALEYGMVGHNTGLI--SNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSA 501 (504)
T ss_dssp HHHHHHHHHSCCSEEEESCSCC--CCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEE
T ss_pred HHHHHHHHhCCcCeEEECCCCC--CCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEe
Confidence 9999999999999999998653 345799999999999999999999999999999864
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-97 Score=791.00 Aligned_cols=443 Identities=25% Similarity=0.426 Sum_probs=416.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+|+++++++|++|++.|++++.++|.++|++++++|+++.++|++++++|+||+..++...|+..+++
T Consensus 50 g~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~ 129 (498)
T 4f3x_A 50 GAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIID 129 (498)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999995579999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|+++.++++... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 130 ~l~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~ 206 (498)
T 4f3x_A 130 CWRFFAGAVRNLHAP-AAGEY--LPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALK 206 (498)
T ss_dssp HHHHHHHHTTCCEEE-CBEEE--ETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHH
T ss_pred HHHHHHHHHHHhcCc-cccCC--cccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHH
Confidence 999999988875432 22111 134567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++. ++ +|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.|++.+++++||+++|||||||+||++|
T Consensus 207 l~~l~~----ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~d 281 (498)
T 4f3x_A 207 LARLIA----DI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGD 281 (498)
T ss_dssp HHHHHH----TT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTT
T ss_pred HHHHHH----Hh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCceeecCCCCCcEEECCC
Confidence 988876 56 9999999999965 68899987 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|+++
T Consensus 282 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a 361 (498)
T 4f3x_A 282 ADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERA 361 (498)
T ss_dssp SCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCC-cEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 318 LDKGA-EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 318 ~~~Ga-~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
+++|+ ++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 362 ~~~Ga~~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d 437 (498)
T 4f3x_A 362 ADQKHIEITTGGRTG----SDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKD 437 (498)
T ss_dssp HHSTTCEEEECCSBC----CSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSB
T ss_pred HHCCCCEEEECCccC----CCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCC
Confidence 99999 999999742 2479999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
.++++++++++++|+|+||++..+. +.+||||+|+||+|+++|.+||++||+.|+|+..
T Consensus 438 ~~~a~~~a~~l~aG~V~vN~~~~~~--~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~ 496 (498)
T 4f3x_A 438 ISKAMRAASRLQYGCTWINTHFMLT--NEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMIN 496 (498)
T ss_dssp HHHHHHHHHHCCSSEEEESCCSCCC--TTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEE
T ss_pred HHHHHHHHHhCCcceEEEcCCCCCC--CCCCcCCcCcCCcCccchHHHHHHhhceEEEEEe
Confidence 9999999999999999999986654 5699999999999999999999999999999763
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-97 Score=790.03 Aligned_cols=443 Identities=30% Similarity=0.462 Sum_probs=416.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH---HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMT 77 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~---~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~ 77 (522)
|+++++++.++.+++++++++|++||. .|+.++.++|.++|++++++|++++++|++++++|+||+..++...|+..
T Consensus 45 g~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~ 124 (500)
T 1o04_A 45 GEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDM 124 (500)
T ss_dssp TEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 689999999999999999999999999 99999999999999999999999999999999999999999886679999
Q ss_pred HHHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHH
Q 009919 78 TCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 157 (522)
Q Consensus 78 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~ 157 (522)
+++.++|+++.+++|..+. .+. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|++
T Consensus 125 ~~~~~~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t 200 (500)
T 1o04_A 125 VLKCLRYYAGWADKYHGKT-IPI---DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLT 200 (500)
T ss_dssp HHHHHHHHHHHTTTCCEEE-ECC---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHH
T ss_pred HHHHHHHHHHHHHHhhCcc-eec---CCCceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHH
Confidence 9999999999998876542 221 123456899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEeeecCc-chhhhhHhc--CccEEEEeCCHHHHHHHHHHHh-cCCCceeeeCCCcceEE
Q 009919 158 GCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELGGKDAFI 233 (522)
Q Consensus 158 ~~~l~~~~~~~l~~ag~p~g~v~vv~g~-~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa-~~~~pv~lelgGk~p~i 233 (522)
+..+++++. ++|+|+|++|+|+|+ .+.+++|++ .+|+|+||||+.+|+.|++.++ +++||+++|||||||+|
T Consensus 201 ~~~l~~l~~----~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~i 276 (500)
T 1o04_A 201 ALYVANLIK----EAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNI 276 (500)
T ss_dssp HHHHHHHHH----HHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEE
T ss_pred HHHHHHHHH----HhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEE
Confidence 998888765 689999999999995 478899987 7999999999999999999999 99999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHH
Q 009919 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 313 (522)
Q Consensus 234 V~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~ 313 (522)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++
T Consensus 277 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~ 356 (500)
T 1o04_A 277 IMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGY 356 (500)
T ss_dssp ECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEe
Q 009919 314 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 393 (522)
Q Consensus 314 i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~ 393 (522)
|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 357 i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 432 (500)
T 1o04_A 357 INTGKQEGAKLLCGGGIA----ADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432 (500)
T ss_dssp HHHHHHTTCEEEECCSBC----CSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEE
T ss_pred HHHHHhCCCEEEeCCccC----CCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEE
Confidence 999999999999999732 1368999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 394 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 394 s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
|+|.++++++++++++|+|+||++... .+.+||||+|.||+|++||.+||++||+.|+|+.+
T Consensus 433 t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~ 494 (500)
T 1o04_A 433 TKDLDKANYLSQALQAGTVWVNCYDVF--GAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 494 (500)
T ss_dssp CSBHHHHHHHHHHCCSSEEEESCSSCC--CTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred CCCHHHHHHHHHhCCeeEEEECCCCCC--CCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEe
Confidence 999999999999999999999987543 35699999999999999999999999999999764
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-97 Score=790.75 Aligned_cols=445 Identities=27% Similarity=0.455 Sum_probs=415.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH--HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~--~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
|+++++++.++.+++++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+||+..++...|+..+
T Consensus 62 g~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~ 141 (517)
T 2o2p_A 62 GSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMS 141 (517)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 689999999999999999999999999 999999999999999999999999999999999999999999865799999
Q ss_pred HHHHHHHHHccccccCcccccCCcc-cccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRS-MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 157 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~ 157 (522)
++.++|++..++++.... .+.... ......++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|++
T Consensus 142 ~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~t 220 (517)
T 2o2p_A 142 IQTFRYFAGWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLT 220 (517)
T ss_dssp HHHHHHHHHHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHH
Confidence 999999999888765432 222100 112356899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHh-cCCCceeeeCCCcceEE
Q 009919 158 GCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELGGKDAFI 233 (522)
Q Consensus 158 ~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa-~~~~pv~lelgGk~p~i 233 (522)
+..+++++. ++|+|+|++|+|+|.+ +.+++|++ .+|+|+||||+.+|+.|++.++ +++||+++|||||||+|
T Consensus 221 a~~l~~l~~----eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~I 296 (517)
T 2o2p_A 221 ALKFAELTL----KAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296 (517)
T ss_dssp HHHHHHHHH----HTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEE
T ss_pred HHHHHHHHH----HhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEE
Confidence 999888765 6899999999999965 67888987 8999999999999999999999 99999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHH
Q 009919 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 313 (522)
Q Consensus 234 V~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~ 313 (522)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++
T Consensus 297 V~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~ 376 (517)
T 2o2p_A 297 IFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEY 376 (517)
T ss_dssp ECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCC--HHHHHHHHhcCCCCceeE
Q 009919 314 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVKLANDSRYGLGCA 391 (522)
Q Consensus 314 i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gL~a~ 391 (522)
|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+| +||||+++|+++|||++|
T Consensus 377 i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~ 452 (517)
T 2o2p_A 377 CQRGVKEGATLVCGGNQV----PRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452 (517)
T ss_dssp HHHHHHTTCEEEECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCE
T ss_pred HHHHHHCCCEEEeccccC----CCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEE
Confidence 999999999999999742 13689999999999999999999999999999999999 999999999999999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 392 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 392 v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
|||+|.++++++++++++|+|+||++.. ..+.+||||+|+||+|+++|.+|+++||+.|+|+.
T Consensus 453 v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~ 515 (517)
T 2o2p_A 453 VFTRDINKALYVSDKLQAGTVFINTYNK--TDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515 (517)
T ss_dssp EECSBHHHHHHHHHHCCSSEEEESCSSC--CCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEE
T ss_pred EeCCCHHHHHHHHHhcCEeEEEECCCCC--CCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEe
Confidence 9999999999999999999999998644 24579999999999999999999999999999975
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-97 Score=789.44 Aligned_cols=444 Identities=31% Similarity=0.520 Sum_probs=415.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH--HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~--~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
|+++++++.++.+++++++++|++|++ .|+.+|.++|.++|++++++|++++++|++++++|+||+..++...|+..+
T Consensus 34 g~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~ 113 (495)
T 3b4w_A 34 GEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGS 113 (495)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 689999999999999999999999999 899999999999999999999999999999999999999999865799999
Q ss_pred HHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++.++++++.++++.... .+.+ .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++
T Consensus 114 ~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~ 189 (495)
T 3b4w_A 114 MGAMNYFAGAADKVTWTE-TRTG---SYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTA 189 (495)
T ss_dssp HHHHHHHHTCGGGSCSEE-EEEE---TTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHH
T ss_pred HHHHHHHHHHHHHhcCCc-ccCC---CCceEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHH
Confidence 999999999988876532 2211 233568999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
..+++++. ++|+|+|++++|+|+.+.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++
T Consensus 190 ~~l~~l~~----eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~pv~lELGGk~p~iV~~ 265 (495)
T 3b4w_A 190 NALAEVFA----EVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILE 265 (495)
T ss_dssp HHHHHHHH----HTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECT
T ss_pred HHHHHHHH----HhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceeecCCCcceEEECC
Confidence 99888776 689999999999995578999987 899999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++|++
T Consensus 266 dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~ 345 (495)
T 3b4w_A 266 DVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAK 345 (495)
T ss_dssp TCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
++++|+++++||..... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 346 a~~~Ga~~~~gG~~~~~--~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 423 (495)
T 3b4w_A 346 GIEEGARLVCGGGRPEG--LDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTD 423 (495)
T ss_dssp HHHTTCEEEECCSCCTT--CTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSC
T ss_pred HHhCCCEEEecCccccc--ccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCC
Confidence 99999999999974210 1258999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
.++++++++++++|+|+||++. ..+.+||||+|.||+|+++|++||++||+.|+|+.+
T Consensus 424 ~~~a~~~~~~l~aG~V~iN~~~---~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~ 481 (495)
T 3b4w_A 424 VPKGIKISQQIRTGTYGINWYA---FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLP 481 (495)
T ss_dssp HHHHHHHHHHSCCSCCEESSCC---CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECC
T ss_pred HHHHHHHHHhCCEeEEEECCCC---CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEc
Confidence 9999999999999999999875 345799999999999999999999999999999753
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-97 Score=790.34 Aligned_cols=446 Identities=30% Similarity=0.470 Sum_probs=415.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|++++.++|.++|++++++|+++.++|++++++|+||+..++. .|+..+++
T Consensus 46 g~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~ 124 (503)
T 1a4s_A 46 GRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAWQ 124 (503)
T ss_dssp CCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999984 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|++++++++.. +..+.. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 125 ~~~~~a~~~~~~~g-~~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~ 200 (503)
T 1a4s_A 125 CIEYYAGLAPTLSG-QHIQLP---GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVI 200 (503)
T ss_dssp HHHHHHHHGGGCCE-EEEECG---GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHhcC-CcccCC---CCceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence 99999999888754 222221 23467899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+++++. ++|+|+|++++|+|+++.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++||
T Consensus 201 l~~l~~----~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~~~v~lELGGk~p~IV~~dA 276 (503)
T 1a4s_A 201 LAEIFH----EAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDC 276 (503)
T ss_dssp HHHHHH----HTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTS
T ss_pred HHHHHH----HhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceEEecCCcCeEEECCCC
Confidence 888766 789999999999995577888987 79999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++|++++
T Consensus 277 Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~ 356 (503)
T 1a4s_A 277 ELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAK 356 (503)
T ss_dssp CHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCCCC--CCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 319 DKGAEILARGSFGHLSE--GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~~--~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
++|+++++||....... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 357 ~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 436 (503)
T 1a4s_A 357 KEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRD 436 (503)
T ss_dssp HHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSB
T ss_pred HCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCC
Confidence 99999999997421000 0358999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
.++++++++++++|+|+||++... .+.+||||+|+||+|++||++||++||+.|+|+.+
T Consensus 437 ~~~a~~~~~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~ 495 (503)
T 1a4s_A 437 ISRAHRVAANLEAGTCYINTYSIS--PVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVE 495 (503)
T ss_dssp HHHHHHHHHHSCSSEEEESCCCCC--CTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEEC
T ss_pred HHHHHHHHHHCceeEEEECCCCCC--CCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEc
Confidence 999999999999999999997653 35699999999999999999999999999999874
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-97 Score=787.85 Aligned_cols=443 Identities=28% Similarity=0.462 Sum_probs=416.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH---HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMT 77 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~---~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~ 77 (522)
|+++++++.++.+++++++++|++||+ .|+.++.++|.++|++++++|++++++|++++++|+||+..++...|+..
T Consensus 46 g~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~ 125 (501)
T 1bxs_A 46 EEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGG 125 (501)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 689999999999999999999999999 89999999999999999999999999999999999999999886689999
Q ss_pred HHHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHH
Q 009919 78 TCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 157 (522)
Q Consensus 78 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~ 157 (522)
+++.++|+++.+++|.... .+. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|++
T Consensus 126 ~~~~~~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t 201 (501)
T 1bxs_A 126 CIKTLRYCAGWADKIQGRT-IPM---DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLT 201 (501)
T ss_dssp HHHHHHHHHHHGGGCCEEE-ECC---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHHhhCCe-eec---cCCcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHH
Confidence 9999999999998876542 221 123456899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHh-cCCCceeeeCCCcceEE
Q 009919 158 GCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELGGKDAFI 233 (522)
Q Consensus 158 ~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa-~~~~pv~lelgGk~p~i 233 (522)
+..+++++. ++|+|+|++|+|+|++ +.+++|++ .+|+|+||||+.+|+.|++.++ +++||+++|||||||+|
T Consensus 202 ~~~l~~l~~----~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~i 277 (501)
T 1bxs_A 202 ALHMGSLIK----EAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCI 277 (501)
T ss_dssp HHHHHHHHH----HHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEE
T ss_pred HHHHHHHHH----HhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEE
Confidence 998888765 6899999999999954 67899987 7999999999999999999999 99999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHH
Q 009919 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 313 (522)
Q Consensus 234 V~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~ 313 (522)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++
T Consensus 278 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~ 357 (501)
T 1bxs_A 278 VFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDL 357 (501)
T ss_dssp ECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEe
Q 009919 314 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 393 (522)
Q Consensus 314 i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~ 393 (522)
|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 358 i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 433 (501)
T 1bxs_A 358 IESGKKEGAKLECGGGPW----GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIF 433 (501)
T ss_dssp HHHHHHTTCEECSCCSEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEE
T ss_pred HHHHHhCCCEEEeCCccC----CCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEE
Confidence 999999999999999732 1368999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 394 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 394 s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
|+|.++++++++++++|+|+||++... .+.+||||+|.||+|++||++||++||+.|+|+.+
T Consensus 434 t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~ 495 (501)
T 1bxs_A 434 TNDIDKAITVSSALQSGTVWVNCYSVV--SAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 495 (501)
T ss_dssp CSBHHHHHHHHHHSCCSEEEESCCCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred cCCHHHHHHHHHhcCeeEEEECCCCCC--CCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEc
Confidence 999999999999999999999987543 35699999999999999999999999999999764
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-97 Score=790.03 Aligned_cols=447 Identities=24% Similarity=0.369 Sum_probs=417.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+.++.++|.++|++++++|++++++|++++++|+||+..++ .+|+..+++
T Consensus 47 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~ 125 (500)
T 2j6l_A 47 NEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEG-VGEVQEYVD 125 (500)
T ss_dssp TEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHH-HHHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999999999998 579999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|++++++++... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 126 ~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 202 (500)
T 2j6l_A 126 ICDYAVGLSRMIGGP-ILPSE--RSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVA 202 (500)
T ss_dssp HHHHHHHHTTTCCCB-EECCS--STTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHhcCc-ccccc--CCCceeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHH
Confidence 999999887765432 11111 112335778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+++++.++|.++|+|+|++++|+|+.+.+++|++ .+|+|+||||+.+|+.|++.++++++|+++|||||||+||++||
T Consensus 203 l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~dA 282 (500)
T 2j6l_A 203 VTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDA 282 (500)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTC
T ss_pred HHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECCCC
Confidence 9999999999999999999999996678899986 89999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++
T Consensus 283 Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~ 362 (500)
T 2j6l_A 283 DLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAK 362 (500)
T ss_dssp CHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHH
Q 009919 319 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 398 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 398 (522)
++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 363 ~~Ga~v~~gg~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 438 (500)
T 2j6l_A 363 KEGGTVVYGGKVM----DRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLG 438 (500)
T ss_dssp HTTCEEEECCSBC----SSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHH
T ss_pred HCCCEEEECCccc----CCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHH
Confidence 9999999999742 236899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH--HHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 399 RAREIA--AQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 399 ~~~~~~--~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
++++++ .++++|+|+||++... ..+.+||||+|.||+|++||.+|+++||+.|+|+.
T Consensus 439 ~a~~~~~~~~~~~G~V~vN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~ 497 (500)
T 2j6l_A 439 RIFRWLGPKGSDCGIVNVNIPTSG-AEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTI 497 (500)
T ss_dssp HHHHHHSTTSCCSSEEEESSCTTC-CCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEE
T ss_pred HHHHHHhhccCCeeEEEECCCCcc-CCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEE
Confidence 999999 7799999999986543 34568999999999999999999999999999975
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-97 Score=793.93 Aligned_cols=445 Identities=30% Similarity=0.456 Sum_probs=417.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHH--HHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQ--KVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~--~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
||++++++.++.+++++++++|++|+ ..|+.++.++|.++|++++++|++++++|++++++|+||+..++ ..|+..+
T Consensus 49 g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~ 127 (528)
T 3u4j_A 49 GEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQA-RGEIGFC 127 (528)
T ss_dssp TCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHH
T ss_pred CcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHH
Confidence 68999999999999999999999999 78999999999999999999999999999999999999999999 6899999
Q ss_pred HHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++.++++++.++++.. +..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 128 ~~~l~~~a~~~~~~~~-~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~ 204 (528)
T 3u4j_A 128 ADLWSYAAGQARALEG-QTHNNI--GDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTS 204 (528)
T ss_dssp HHHHHHHHHHHTTCCE-EEECCS--CTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHHhcC-eeeccC--CCCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHH
Confidence 9999999999888753 222221 1245678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEc
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~ 235 (522)
.++++++. ++|+|+|+||+|+|++ +.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||+
T Consensus 205 ~~l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~ 280 (528)
T 3u4j_A 205 IRLAELAR----EAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVF 280 (528)
T ss_dssp HHHHHHHH----HHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEEC
T ss_pred HHHHHHHH----HhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHhcCCceEEecCCCCeeEEC
Confidence 99888766 6799999999999954 78899987 79999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 236 ~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
+|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++++++.++|+
T Consensus 281 ~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~ 360 (528)
T 3u4j_A 281 ADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVT 360 (528)
T ss_dssp TTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
+++++|+++++||.... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 361 ~a~~~Ga~v~~gG~~~~---~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~ 437 (528)
T 3u4j_A 361 AGITSGAELLLGGERIG---REAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWST 437 (528)
T ss_dssp HHHHTTCEEEECCSEEC---TTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECS
T ss_pred HHHHCCCEEEeCCCcCC---CCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcC
Confidence 99999999999997421 117999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
|.++++++++++++|+|+||++... .+.+||||+|.||+|++||++||++||+.|+|+.+.
T Consensus 438 d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 498 (528)
T 3u4j_A 438 NLETALQTIRRIRAGRCWINSVIDG--TPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTL 498 (528)
T ss_dssp BHHHHHHHHHHSCCSEEEESCCSCC--CTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEES
T ss_pred CHHHHHHHHHhCCeeEEEECCCCCC--CCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeC
Confidence 9999999999999999999997543 457999999999999999999999999999998754
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-97 Score=794.48 Aligned_cols=445 Identities=22% Similarity=0.382 Sum_probs=417.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|++++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 62 ~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~ 140 (538)
T 3qan_A 62 DQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEAD-ADTAEAID 140 (538)
T ss_dssp TCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHH
T ss_pred CcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 59999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.+.+++.++..+.. .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 141 ~l~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~ 217 (538)
T 3qan_A 141 FLEYYARQMIELNRGKEILSR---PGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAK 217 (538)
T ss_dssp HHHHHHHHHHHHHTCBCCCCC---TTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHH
T ss_pred HHHHHHHHHHHhcCCeeeccc---CCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHH
Confidence 999999886666655544322 24668899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcC------CCceeeeCCCcce
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT------LTPVTLELGGKDA 231 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~------~~pv~lelgGk~p 231 (522)
+++++. ++|+|+|+|++|+|++ +.+++|++ .+|+|+||||+.+|+.|++.++++ +||+++|||||||
T Consensus 218 l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p 293 (538)
T 3qan_A 218 FVEVLE----DAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDT 293 (538)
T ss_dssp HHHHHH----HTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCE
T ss_pred HHHHHH----HhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCc
Confidence 887765 7899999999999965 68899987 899999999999999999999998 9999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHH
Q 009919 232 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 311 (522)
Q Consensus 232 ~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~ 311 (522)
+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.
T Consensus 294 ~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~ 373 (538)
T 3qan_A 294 VVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIM 373 (538)
T ss_dssp EEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHH
T ss_pred eEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeE
Q 009919 312 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 391 (522)
Q Consensus 312 ~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~ 391 (522)
++|++++++| ++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 374 ~~i~~a~~~G-~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~ 448 (538)
T 3qan_A 374 SYIEIGKKEG-RLMTGGEGD----SSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGA 448 (538)
T ss_dssp HHHHHHHHHS-EEEECCCEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEE
T ss_pred HHHHHHHHCC-eEEeCCCcC----CCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEE
Confidence 9999999999 999999742 12699999999999999999999999999999999999999999999999999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC-CcchHHHHHhchhceEEEEcc
Q 009919 392 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 392 v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~~l~~ft~~k~v~~~~ 458 (522)
|||+|.++++++++++++|+|+||+.......+.+||||+|.||+| ++||++||++||+.|+|+.+.
T Consensus 449 v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~~ 516 (538)
T 3qan_A 449 VITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMY 516 (538)
T ss_dssp EECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEEC
T ss_pred EECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEec
Confidence 9999999999999999999999996544443567999999999999 999999999999999998754
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-97 Score=784.19 Aligned_cols=443 Identities=28% Similarity=0.451 Sum_probs=416.6
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+.+|.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 32 g~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~ 110 (479)
T 2imp_A 32 EAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTAD 110 (479)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999986 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.++++..+.. +.. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 111 ~l~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 187 (479)
T 2imp_A 111 YIDYMAEWARRYEGEII-QSD--RPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIA 187 (479)
T ss_dssp HHHHHHTTTTTCCCEEE-CCS--STTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHhhCCcc-ccC--CCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 99999999888765432 211 123467899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++. ++|+|+|++++|+|++ +.+++|++ ++|+|+||||+.+|+.|++.+++++||+++|||||||+||++|
T Consensus 188 l~~l~~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~d 263 (479)
T 2imp_A 188 FAKIVD----EIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDD 263 (479)
T ss_dssp HHHHHH----HHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTT
T ss_pred HHHHHH----HhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEEcCCcCeEEECCC
Confidence 888776 6899999999999975 57888887 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA-GKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~-~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+ +++++|||+++.+++++.++|++
T Consensus 264 ADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~ 343 (479)
T 2imp_A 264 ADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVAR 343 (479)
T ss_dssp SCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998 89999999999999999999999
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 344 a~~~Ga~~~~gG~~~----~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d 419 (479)
T 2imp_A 344 AVEEGARVAFGGKAV----EGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQN 419 (479)
T ss_dssp HHHTTCEEEECCCCC----CSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCC
T ss_pred HHHCCCEEEECCccc----CCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCC
Confidence 999999999999742 2358999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
.++++++++++++|+|+||++..+ .+.+||||+|+||+|++||++||++||+.|+|+.+
T Consensus 420 ~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 420 LNVAMKAIKGLKFGETYINRENFE--AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp HHHHHHHHHHCCSSEEEESSCCCC--CTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHhCCEeEEEECCCCCC--CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 999999999999999999997665 35799999999999999999999999999999753
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-97 Score=784.59 Aligned_cols=441 Identities=28% Similarity=0.456 Sum_probs=411.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+.++.++|.++|++++++|+++.++|++++++|+||+..++...|+..+++
T Consensus 51 g~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~ 130 (497)
T 3i44_A 51 EEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSS 130 (497)
T ss_dssp TEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999997679999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEE-EeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVE-FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGC 159 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~ 159 (522)
.++++++.+..+..+.... .+...+++ ++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 131 ~~~~~a~~~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~ 205 (497)
T 3i44_A 131 HIRNFIKAYKEFSFQEALI-----EGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAM 205 (497)
T ss_dssp HHHHHHHHHHHCCSEEESS-----TTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHhhccccccccc-----CCceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHH
Confidence 9999998877765433211 13446788 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 160 FYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 160 ~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
.+++++. ++|+|+|+||+|+|++ +.+++|++ ++|+|+||||+.+|+.|++.+++++||+++|||||||+||++
T Consensus 206 ~l~~l~~----eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~ 281 (497)
T 3i44_A 206 LFAEILD----EAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFA 281 (497)
T ss_dssp HHHHHHH----HTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECT
T ss_pred HHHHHHH----HhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceeeccCCCCceEECC
Confidence 8888765 7899999999999965 78899987 899999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++.++|++
T Consensus 282 dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~ 360 (497)
T 3i44_A 282 DAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQS 360 (497)
T ss_dssp TSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHH
T ss_pred Chh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHH
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
++++|+++++||..... ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 361 a~~~Ga~v~~gG~~~~~-~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d 439 (497)
T 3i44_A 361 GIDEGATLVTGGTGLPM-GMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQD 439 (497)
T ss_dssp HHHTTCEEEECCSSCCT-TCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSC
T ss_pred HHHCCCEEEECCCcCCC-cCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCC
Confidence 99999999999942111 12369999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
.++++++++++++|+|+||+. ...+.+||||+|.||+|+++|++||++||+.|+|+
T Consensus 440 ~~~a~~~a~~l~aG~V~iN~~---~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 440 RSKCRRIAAQVRSGMVEVNGH---ELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp HHHHHHHHHHSCCSEEEETTC---CCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred HHHHHHHHHhCCcCeEEECCC---CCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence 999999999999999999952 23456999999999999999999999999999985
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-97 Score=788.83 Aligned_cols=456 Identities=28% Similarity=0.408 Sum_probs=423.8
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+||+..+. .|+...++
T Consensus 16 g~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~--~ev~~~~~ 93 (474)
T 4h7n_A 16 GKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSITV--LEIDSFLA 93 (474)
T ss_dssp CSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSHHHH--HHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH--HHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999999986443 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.+++++....++++........ .+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~ 171 (474)
T 4h7n_A 94 SIDRWCGLAPELLQTSAKNTSI--PFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVAP 171 (474)
T ss_dssp HHHHHHHHHHHHHCCEEEECSS--TTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHHH
T ss_pred HHHHHHhhhhhcccccccCCCC--CCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHHH
Confidence 9999988887777655433221 23455678899999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhcCccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCH
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl 240 (522)
+.+++. ++|+|+|++++++|+.+.+..|+.++|+|+||||+.+|+.|++.+++++||+++|||||||+||++|||+
T Consensus 172 l~~~~~----~ag~p~gv~~~v~g~~~~~~~l~~~v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dAdl 247 (474)
T 4h7n_A 172 LLMALN----TVPELRDVLIFVEGGGETGANLINYVDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLESANL 247 (474)
T ss_dssp HHHHHT----TCTTTTTTEEECCCCHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEEECTTSCH
T ss_pred HHhhhh----hhcccccceeeccccchhhhhhhhccceEEeccccchhhhhhhhhhcccccccccCCCcCccccCchhhH
Confidence 777654 7899999999999988889999889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc
Q 009919 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK 320 (522)
Q Consensus 241 ~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~ 320 (522)
+.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++
T Consensus 248 ~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 327 (474)
T 4h7n_A 248 ELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEK 327 (474)
T ss_dssp HHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHH
Q 009919 321 GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA 400 (522)
Q Consensus 321 Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~ 400 (522)
|+++++||... ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++
T Consensus 328 ga~v~~Gg~~~---~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a 404 (474)
T 4h7n_A 328 GAVIHCGGKVE---ELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEA 404 (474)
T ss_dssp TCEEEECCCCE---EETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHH
T ss_pred CceeccCCccc---ccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHH
Confidence 99999998742 134689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC-CcchHHHHHhchhceEEEEcccccccccCCCCCCCC
Q 009919 401 REIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQY 473 (522)
Q Consensus 401 ~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~~~~~ 473 (522)
+++++++++|+|+||+...+...+.+||||+|.||+| +++|.+||++||+.|+|+.+.. ..+.|+||
T Consensus 405 ~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~------~~~~p~w~ 472 (474)
T 4h7n_A 405 LKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTN------STSDPWWF 472 (474)
T ss_dssp HHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECS------SSCCTTSC
T ss_pred HHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCC------CCCCCCCc
Confidence 9999999999999999888777778999999999998 7899999999999999988763 34567776
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-96 Score=786.27 Aligned_cols=446 Identities=26% Similarity=0.440 Sum_probs=415.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|++++.++|.++|++++++|+++.++|++++++|+||+..++. .|+..+++
T Consensus 52 g~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~ 130 (515)
T 2d4e_A 52 NEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAE 130 (515)
T ss_dssp TEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999997 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.++++... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 131 ~l~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 207 (515)
T 2d4e_A 131 NFAFYAEYAEHAMED-RTFPV--DRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATK 207 (515)
T ss_dssp HHHHHHTTGGGTTCE-EECCB--TTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHhcCc-ccccC--CCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHH
Confidence 999999988887542 22221 123467899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++. ++|+|+|++|+|+|++ +.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++|
T Consensus 208 l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~~v~lELGGk~p~iV~~d 283 (515)
T 2d4e_A 208 LAEILK----EADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFAD 283 (515)
T ss_dssp HHHHHH----HTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTT
T ss_pred HHHHHH----HhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceEecCCCcCeEEEcCC
Confidence 888766 7899999999999965 67888987 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++|+++
T Consensus 284 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a 363 (515)
T 2d4e_A 284 ADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAG 363 (515)
T ss_dssp SCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCC----CCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEe
Q 009919 318 LDKGAEILARGSFGHL----SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 393 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~----~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~ 393 (522)
+++|+++++||..... +....|+|++|||+.+ +++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 364 ~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 442 (515)
T 2d4e_A 364 KREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVF 442 (515)
T ss_dssp HHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEE
T ss_pred HHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEE
Confidence 9999999999974210 0012589999999999 9999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 394 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 394 s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
|+|.++++++++++++|+|+||++.. ..+.+||||+|+||+|++||++||++||+.|+|+.+
T Consensus 443 t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~ 504 (515)
T 2d4e_A 443 TRDLERAHRLALELEAGMVYLNSHNV--RHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALP 504 (515)
T ss_dssp CSBHHHHHHHHHHSCSSEEEESSSCC--CCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEE
T ss_pred CCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEc
Confidence 99999999999999999999998754 345799999999999999999999999999999875
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-96 Score=783.37 Aligned_cols=441 Identities=27% Similarity=0.446 Sum_probs=413.0
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+.++.++|.++|++++++|++++++|++++++|+||+..++...|+..+++
T Consensus 48 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~ 127 (495)
T 1wnd_A 48 GDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVD 127 (495)
T ss_dssp TEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999986449999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.++++.. +..+.. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 128 ~~~~~a~~~~~~~g-~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~ 204 (495)
T 1wnd_A 128 VFRFFAGAARCLNG-LAAGEY--LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALK 204 (495)
T ss_dssp HHHHHHHHTTCCEE-ECBEEE--ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHH
T ss_pred HHHHHHHHHHHhcC-ccccCC--CCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHH
Confidence 99999999888743 222211 123456899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCc-chhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~-~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++. ++ +|+|++|+|+|+ .+.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++|
T Consensus 205 l~~l~~----ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~l~~v~lELGGk~p~iV~~d 279 (495)
T 1wnd_A 205 LAELAK----DI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDD 279 (495)
T ss_dssp HHHHHT----TT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTT
T ss_pred HHHHHH----Hh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCccccccCCCCeEEECCc
Confidence 988876 56 999999999995 477899998 7999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|+++
T Consensus 280 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a 359 (495)
T 1wnd_A 280 ADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEA 359 (495)
T ss_dssp SCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcC-CcEeeccC-CCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 318 LDKG-AEILARGS-FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 318 ~~~G-a~v~~gG~-~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
+++| +++++||. .. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 360 ~~~G~a~~~~gG~~~~-----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~ 434 (495)
T 1wnd_A 360 KATGHIKVITGGEKRK-----GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTK 434 (495)
T ss_dssp HHTSSCEEEECCSBCS-----SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECS
T ss_pred HhCCCeEEEECCcccC-----CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECC
Confidence 9999 99999986 31 25899999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
|.++++++++++++|+|+||++... .+.+||||+|.||+|++||.+||++||+.|+|+.
T Consensus 435 d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~ 493 (495)
T 1wnd_A 435 DVGRAHRVSARLQYGCTWVNTHFML--VSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMV 493 (495)
T ss_dssp BHHHHHHHHHHCCSSEEEESCCCCC--CTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEE
T ss_pred CHHHHHHHHHhCCcceEEECCCCCC--CCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEe
Confidence 9999999999999999999987542 3579999999999999999999999999999975
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-96 Score=778.75 Aligned_cols=443 Identities=29% Similarity=0.508 Sum_probs=418.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+++++++++|++|+..|+.++.++|.++|+++++.|+++.++|++++++|+||+..++. .|+..+++
T Consensus 17 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 95 (462)
T 3etf_A 17 GQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQAR-AEVTKSAA 95 (462)
T ss_dssp CCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999986 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++...++..+... ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+
T Consensus 96 ~~~~~a~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~ 171 (462)
T 3etf_A 96 LCDWYAEHGPAMLNPEPT----LVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQM 171 (462)
T ss_dssp HHHHHHHHHHHHTSCEEC----SSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHH
T ss_pred HHHHHHHhHHHhcCCccc----CCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHH
Confidence 999999988877654421 1234567899999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+.+++. ++|+|+|++|+|+|+.+.+++|++ ++|.|+||||+.+|+.|++.++++++|+++|||||||+||++||
T Consensus 172 l~~~l~----~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dA 247 (462)
T 3etf_A 172 IARILA----EAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDA 247 (462)
T ss_dssp HHHHHH----HTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTS
T ss_pred HHHHHH----HhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEECCCC
Confidence 887754 789999999999998788888887 89999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||++..+++++.+++++++
T Consensus 248 Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~ 327 (462)
T 3etf_A 248 DLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASV 327 (462)
T ss_dssp CHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHH
Q 009919 319 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 398 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 398 (522)
++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 328 ~~ga~~~~gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~ 403 (462)
T 3etf_A 328 AEGARLLLGGEKI----AGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDT 403 (462)
T ss_dssp HTTCEEEECCSBC----SSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHH
T ss_pred HCCCEEEeCCccc----CCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 9999999999743 246899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 399 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 399 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
.++++++++++|+|+||++... .+.+||||+|.||+|++||++||++||+.|+|+.++
T Consensus 404 ~a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 404 LAAEMAARLECGGVFINGYSAS--DARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp HHHHHHHHCCSSEEEESSCCCC--CTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred HHHHHHHhCCcceEEECCCCCC--CCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 9999999999999999997543 456999999999999999999999999999998764
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-96 Score=778.62 Aligned_cols=442 Identities=29% Similarity=0.516 Sum_probs=413.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+.++.++|.++|+++++.|+++.++|++++++|+||+..++. .|+..+++
T Consensus 35 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~ 113 (481)
T 3jz4_A 35 GDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAAS 113 (481)
T ss_dssp CCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999985 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|++....+.... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 114 ~~~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~ 190 (481)
T 3jz4_A 114 FIEWFAEEGKRIYGD-TIPGH--QADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALA 190 (481)
T ss_dssp HHHHHHHHGGGCCEE-EECCS--STTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHhcCc-ccccc--CCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHH
Confidence 999998876654321 11111 134567899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+.+++. ++|+|+|+|++|+|++ +.+++|++ .+|+|+||||+.+|+.|++.++++++|+++|||||||+||++|
T Consensus 191 l~~l~~----~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~d 266 (481)
T 3jz4_A 191 LAELAI----RAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDD 266 (481)
T ss_dssp HHHHHH----HHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTTCEEEEECCCCEEEEECTT
T ss_pred HHHHHH----HhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeEEEcCC
Confidence 888765 6799999999999964 77899987 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|+++
T Consensus 267 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a 346 (481)
T 3jz4_A 267 ADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADA 346 (481)
T ss_dssp SCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 347 ~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~ 422 (481)
T 3jz4_A 347 LEKGARVVCGGKAH----ERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDL 422 (481)
T ss_dssp HHTTCEEEECCSBC----TTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBH
T ss_pred HHCCCEEEeCCccc----CCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCH
Confidence 99999999999742 24689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
++++++++++++|+|+||++... .+.+||||+|+||+|++||++||++||+.|+|+.
T Consensus 423 ~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~ 479 (481)
T 3jz4_A 423 SRVFRVGEALEYGIVGINTGIIS--NEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI 479 (481)
T ss_dssp HHHHHHHHHCCCSEEEESCSCCC--CSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHhCCeeeEEECCCCCC--CCCCCcCCcccCcCCCCchHHHHHHhhceeEEEE
Confidence 99999999999999999997553 4569999999999999999999999999999975
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-96 Score=783.17 Aligned_cols=455 Identities=28% Similarity=0.390 Sum_probs=401.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+.++.++|.++|++++++|+++.++|++++++|+||+..++. .|+..+++
T Consensus 38 g~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~~~ 116 (508)
T 3r64_A 38 DSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKAN-LEITLAGN 116 (508)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 59999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH-H
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG-C 159 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~-~ 159 (522)
.++++++..+++.. ..+.. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++ .
T Consensus 117 ~~~~~a~~~~~~~~--~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 193 (508)
T 3r64_A 117 ITKESASFPGRVHG--RISPS-NTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGV 193 (508)
T ss_dssp HHHHHTTSTTTCCE--EEECC-SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTH
T ss_pred HHHHHHHHhhhhcC--ccccc-CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHH
Confidence 99999988776433 22211 11245678999999999999999999999999999999999999999999999999 8
Q ss_pred HHHHHHHHHHHhcCCCCCcEeeecCc-chhhhhHhc--CccEEEEeCCHHHHHHHHHHHhc--CCCceeeeCCCcceEEE
Q 009919 160 FYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASK--TLTPVTLELGGKDAFIV 234 (522)
Q Consensus 160 ~l~~~~~~~l~~ag~p~g~v~vv~g~-~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~--~~~pv~lelgGk~p~iV 234 (522)
++.+++ .++|+|+|++++|+|+ .+.+++|++ .+|+|+||||+.+|+.|++.+++ ++||+++|||||||+||
T Consensus 194 ~l~~ll----~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV 269 (508)
T 3r64_A 194 IPARIF----EEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVV 269 (508)
T ss_dssp HHHHHH----HTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCCCEEEE
T ss_pred HHHHHH----HHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCcCceEE
Confidence 887765 4899999999999997 578999987 89999999999999999999999 99999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i 314 (522)
++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.+++
T Consensus 270 ~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i 349 (508)
T 3r64_A 270 LADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKI 349 (508)
T ss_dssp CTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEec
Q 009919 315 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 394 (522)
Q Consensus 315 ~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s 394 (522)
++++++|+++++||. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 350 ~~a~~~Ga~v~~gG~-------~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t 422 (508)
T 3r64_A 350 ELAKKEGATVQVEGP-------IEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWS 422 (508)
T ss_dssp HHHHTTTCEEEECCC-------EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEEC
T ss_pred HHHHHcCCEEEecCC-------CCCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEc
Confidence 999999999999997 2689999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcccccccccCCCCCCCCC
Q 009919 395 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYP 474 (522)
Q Consensus 395 ~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~~~~~p 474 (522)
+|.+.++++++++++|+|+||++..+ ..+.+||||+|.||+|++||++||++||+.|+|+.+.... ..+.+.||+
T Consensus 423 ~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~~~----~~~~~~~~~ 497 (508)
T 3r64_A 423 KDIDRAAQFALQIDSGMVHINDLTVN-DEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRSAE----NLYFQSHHH 497 (508)
T ss_dssp SCHHHHHHHHTTSCSSEEEECC---------------------CCCHHHHHHHTEEEEEEEEECCST----TCCCC----
T ss_pred CCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEecccc----hhcchhhcc
Confidence 99999999999999999999998655 3567999999999999999999999999999998865321 223346775
Q ss_pred C
Q 009919 475 V 475 (522)
Q Consensus 475 ~ 475 (522)
-
T Consensus 498 ~ 498 (508)
T 3r64_A 498 H 498 (508)
T ss_dssp -
T ss_pred C
Confidence 4
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-96 Score=782.89 Aligned_cols=442 Identities=25% Similarity=0.376 Sum_probs=413.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH-HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~-~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
|+++++++.++.+++++++++|++|++ .|+++|.++|.++|++++++|++++++|++++++|+||+..++. .|+..++
T Consensus 42 g~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~ 120 (501)
T 1uxt_A 42 LATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAV 120 (501)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 689999999999999999999999999 99999999999999999999999999999999999999999996 7999999
Q ss_pred HHHHHHHHccccccCcccccCCcccc--cccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHH
Q 009919 80 EKITWLLSEGEKWLKPEYRSSGRSMI--HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 157 (522)
Q Consensus 80 ~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~ 157 (522)
+.++++++.++++.. +..+...... +...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|++
T Consensus 121 ~~l~~~a~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t 199 (501)
T 1uxt_A 121 DRLRLAELDLKKIGG-DYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLP 199 (501)
T ss_dssp HHHHTGGGGGGGTCC-EEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHH
T ss_pred HHHHHHHHHHHHhcC-ccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHH
Confidence 999999998887643 2222211011 2356899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEc
Q 009919 158 GCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235 (522)
Q Consensus 158 ~~~l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~ 235 (522)
+.++++++. ++|+|+|++++|+|+++.+++|++ .+|+|+||||+.+|+.|++.++ +||+++|||||||+||+
T Consensus 200 ~~~l~~l~~----eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~ 273 (501)
T 1uxt_A 200 AAMAVKALL----DAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVL 273 (501)
T ss_dssp HHHHHHHHH----HTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEECCCCEEEEEC
T ss_pred HHHHHHHHH----HhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC--CCeEEEEcCCcCeEEEC
Confidence 999888766 689999999999997777888987 8999999999999999999988 99999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 236 ~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
+|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++|+
T Consensus 274 ~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~ 353 (501)
T 1uxt_A 274 EDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIE 353 (501)
T ss_dssp TTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCC-cccccEEEecCC---CCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeE
Q 009919 316 DALDKGAEILARGSFGHLSEGAVD-QYFPPTVIVNVN---HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 391 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~-~~~~Ptvl~~~~---~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~ 391 (522)
+++++|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 354 ~a~~~Ga~~~~gG~~-------~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~ 426 (501)
T 1uxt_A 354 DAVEKGGRVLAGGRR-------LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAA 426 (501)
T ss_dssp HHHHTTCEEEECCCB-------CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEE
T ss_pred HHHHCCCEEEeCCcc-------CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEE
Confidence 999999999999972 57 899999999999 9999999999999999999999999999999999999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 392 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 392 v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
|||+|.++++++++++++|+|+||+++ +...+.+||||+|+||+|++||.+||++||+.|+|+.+.
T Consensus 427 v~t~d~~~a~~~~~~l~~G~V~iN~~~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 492 (501)
T 1uxt_A 427 VFGRDVVKIRRAVRLLEVGAIYINDMP-RHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNY 492 (501)
T ss_dssp EECCCHHHHHHHHHHCCSSEEEETSCC-CCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEEC
T ss_pred EeCCCHHHHHHHHHhCCEeeEEEeCCC-CCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEec
Confidence 999999999999999999999999874 334567999999999999999999999999999998753
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-96 Score=780.60 Aligned_cols=442 Identities=29% Similarity=0.490 Sum_probs=413.8
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+++|.++|.++|+++++.|+++.++|++++++|+||+..++. .|+..+++
T Consensus 36 g~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~ 114 (487)
T 2w8n_A 36 GAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSAF 114 (487)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 59999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.++++.. +..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 115 ~~~~~a~~~~~~~g-~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 191 (487)
T 2w8n_A 115 FLEWFSEEARRVYG-DIIHTP--AKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALA 191 (487)
T ss_dssp HHHHHHHHGGGCCC-EEECCS--CTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHH
T ss_pred HHHHHHHHHHHhcC-cccccC--CCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHH
Confidence 99999988877432 222221 124567899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeec---Ccc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEE
Q 009919 161 YFRIIQAALAAVGAPENLVDVIT---GFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 234 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~---g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV 234 (522)
+++++. ++|+|+|++|+|+ |++ +.+++|++ .+|+|+||||+.+|+.|++.++++++|+++|||||||+||
T Consensus 192 l~~l~~----~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV 267 (487)
T 2w8n_A 192 LAELAS----QAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIV 267 (487)
T ss_dssp HHHHHH----HHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHTTTCEEEEEECEEEEEEE
T ss_pred HHHHHH----HhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEecCCCCeEEE
Confidence 888765 6899999999999 854 67889987 7999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHh-ccCCCCCCCCCcccccCCHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSAGPPLAGKYDMGALCLLEHSEKLQNL 313 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~-~~~g~~~~~~~~~g~li~~~~~~~~~~~ 313 (522)
++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++++ +++|+|.++++++|||+++.+++++.++
T Consensus 268 ~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 347 (487)
T 2w8n_A 268 FDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQ 347 (487)
T ss_dssp CTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHcCCcEeeccCCCCCCCCCCCc-ccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEE
Q 009919 314 VNDALDKGAEILARGSFGHLSEGAVDQ-YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 392 (522)
Q Consensus 314 i~~a~~~Ga~v~~gG~~~~~~~~~~~~-~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v 392 (522)
|++++++|+++++||.. ...|+ |++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||
T Consensus 348 i~~a~~~Ga~~~~gg~~-----~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v 422 (487)
T 2w8n_A 348 VNDAVSKGATVVTGGKR-----HQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYF 422 (487)
T ss_dssp HHHHHTTTCEEEECCSB-----CTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEE
T ss_pred HHHHHHCCCEEEeCCcc-----CCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEE
Confidence 99999999999999973 23588 9999999999999999999999999999999999999999999999999999
Q ss_pred ecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 393 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 393 ~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
||+|.+.++++++++++|+|+||++..+. +.+||||+|.||+|++||++||++||+.|+|+.+
T Consensus 423 ~t~d~~~a~~~~~~l~aG~v~vN~~~~~~--~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 423 YSQDPAQIWRVAEQLEVGMVGVNEGLISS--VECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp ECCCHHHHHHHHHHSCSSEEEESCSCCCC--TTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred eCCCHHHHHHHHHhCCeeeEEEcCCCCCC--CCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 99999999999999999999999976653 4599999999999999999999999999999764
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-96 Score=775.98 Aligned_cols=439 Identities=28% Similarity=0.400 Sum_probs=404.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+++|.++|.++|++++++|++++++|++++++|+||+..++..+|+..+++
T Consensus 16 ~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~ 95 (457)
T 3lns_A 16 DDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLH 95 (457)
T ss_dssp -------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHHHHH
T ss_pred CCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999997679999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.+++|..++....+....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+
T Consensus 96 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 175 (457)
T 3lns_A 96 EIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAV 175 (457)
T ss_dssp HHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHH
T ss_pred HHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence 99999999988887654443332334678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc-CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVD 239 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~-~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daD 239 (522)
+++++.++ +|+|+||+|+|+.+.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++|||
T Consensus 176 l~~l~~~a-----lP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dAD 250 (457)
T 3lns_A 176 IEKIIAEA-----FAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDAD 250 (457)
T ss_dssp HHHHHHHH-----CCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEECTTCC
T ss_pred HHHHHHHh-----CCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeECCCCC
Confidence 99988753 999999999997788999998 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHH
Q 009919 240 VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 319 (522)
Q Consensus 240 l~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~ 319 (522)
++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++ |.++ ++|||+++++++++.++++++
T Consensus 251 l~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~~i~~a-- 323 (457)
T 3lns_A 251 LDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQRLVSLLEAT-- 323 (457)
T ss_dssp HHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHHHHHhc--
Confidence 999999999999999999999999999999999999999999999987 5544 999999999999999999985
Q ss_pred cCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhc-CCCCceeEEecCcHH
Q 009919 320 KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND-SRYGLGCAVFSGSQH 398 (522)
Q Consensus 320 ~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gL~a~v~s~d~~ 398 (522)
++++++||.. ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||++||||+|.+
T Consensus 324 -~~~~~~gg~~-----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~ 397 (457)
T 3lns_A 324 -QGQVLVGSQA-----DVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMD 397 (457)
T ss_dssp -CSEEEECCCE-----EGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHH
T ss_pred -CCeEEeCCcc-----CCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHH
Confidence 3699999973 246899999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 399 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 399 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
.++++++++++|+|+||++..+...+.+||||+|.||+|++||++||++||+.|+|+..
T Consensus 398 ~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 398 VAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp HHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred HHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 99999999999999999986665567799999999999999999999999999999764
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-95 Score=778.93 Aligned_cols=443 Identities=25% Similarity=0.383 Sum_probs=413.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+.++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 62 ~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~ 140 (516)
T 1uzb_A 62 SEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAID 140 (516)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999996 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|+++.++++..+...... ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~ 218 (516)
T 1uzb_A 141 FIEYYARAALRYRYPAVEVVP--YPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAK 218 (516)
T ss_dssp HHHHHHHHHGGGCSSCCCCCC--CTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHhcCCcccccC--CCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHH
Confidence 999999998888764321111 123466899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHh------cCCCceeeeCCCcce
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS------KTLTPVTLELGGKDA 231 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa------~~~~pv~lelgGk~p 231 (522)
+++++. ++|+|+|++++|+|++ +.+++|++ .+|+|+||||+.+|+.|++.++ +++||+++|||||||
T Consensus 219 l~~l~~----eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p 294 (516)
T 1uzb_A 219 VFEIFH----EAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNA 294 (516)
T ss_dssp HHHHHH----HHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEE
T ss_pred HHHHHH----HhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccc
Confidence 888766 6899999999999954 67899987 7999999999999999999998 889999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHH
Q 009919 232 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 311 (522)
Q Consensus 232 ~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~ 311 (522)
+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+| ++++++|||+++.+++++.
T Consensus 295 ~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~ 373 (516)
T 1uzb_A 295 IIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVL 373 (516)
T ss_dssp EEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHH
T ss_pred eeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCC-ccccccCCCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeE
Q 009919 312 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 391 (522)
Q Consensus 312 ~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~ 391 (522)
++|++++++| ++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 374 ~~i~~a~~~G-~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~ 448 (516)
T 1uzb_A 374 SYIEIGKNEG-QLVLGGKRL----EGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGG 448 (516)
T ss_dssp HHHHHHTTTS-EEEECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEE
T ss_pred HHHHHHHHCC-CEEECCccC----CCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEE
Confidence 9999999888 899999731 23689999999999999999999999999999999999999999999999999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCC-cchHHHHHhchhceEEEE
Q 009919 392 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 392 v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~-~~g~~~l~~ft~~k~v~~ 456 (522)
|||+|.++++++++++++|+|+||++..+...+.+||||+|.||+|+ .+|.+++++||+.|+|+.
T Consensus 449 v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~ 514 (516)
T 1uzb_A 449 VYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE 514 (516)
T ss_dssp EECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEE
T ss_pred EECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEe
Confidence 99999999999999999999999997666555679999999999995 679999999999999975
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-95 Score=773.76 Aligned_cols=443 Identities=28% Similarity=0.435 Sum_probs=392.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+.++.++|.++|+++++.|+++.++|++++++|+||+..++. .|+..+++
T Consensus 32 ~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 110 (485)
T 4dng_A 32 QSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKST-IELEQTIA 110 (485)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 49999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH-H
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG-C 159 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~-~ 159 (522)
.++++++..++. .....+.. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++ .
T Consensus 111 ~~~~~a~~~~~~-~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~ 188 (485)
T 4dng_A 111 ILDEAMTYTGEL-GGVKEVPS-DIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGT 188 (485)
T ss_dssp HHHHHHHHGGGC-SCEECCCC-SSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTH
T ss_pred HHHHHHHHHHHh-CCeecccc-CCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHH
Confidence 999999887653 22222211 11245678999999999999999999999999999999999999999999999999 8
Q ss_pred HHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 160 FYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 160 ~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
++.+++. ++|+|+|++++|+|++ +.+++|++ .+|+|+||||+.+|+.|++.++++++|+++|||||||+||++
T Consensus 189 ~l~~~l~----~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~ 264 (485)
T 4dng_A 189 IIAKAFE----HAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLS 264 (485)
T ss_dssp HHHHHHH----HTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHHTCEEEEEECCCEEEEECT
T ss_pred HHHHHHH----HhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhhccchhhhcCCCCceEEcC
Confidence 7777654 7899999999999976 58899987 899999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++
T Consensus 265 dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~ 344 (485)
T 4dng_A 265 DADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQ 344 (485)
T ss_dssp TSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
++++|+++++||. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 345 a~~~Ga~v~~gg~-------~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d 417 (485)
T 4dng_A 345 AKTDGIELAVEGK-------RVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSD 417 (485)
T ss_dssp HHHTTCEEEECCC-------EETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSC
T ss_pred HHHCCCEEEeCCC-------CCCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCC
Confidence 9999999999997 268999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
.++++++++++++|+|+||++..+ ..+.+||||+|.||+|++||++||++||+.|+|+.+.
T Consensus 418 ~~~a~~~~~~l~~G~v~vN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 418 LEKGEKFALQIDSGMTHVNDQSVN-DSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp HHHHHHHHTTSCSSEEEESCC-----------------------CHHHHHHHEEEEEEEEEC
T ss_pred HHHHHHHHHhcCcceEEECCCCCC-CCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 999999999999999999998655 3467999999999999999999999999999998643
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-95 Score=770.19 Aligned_cols=437 Identities=32% Similarity=0.479 Sum_probs=409.6
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+.+|.++|.++|++++++|+++.++|++++++|+||+..++. .|+..+++
T Consensus 28 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~ 106 (475)
T 1euh_A 28 GAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTAE 106 (475)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999985 79999999
Q ss_pred HHHHHHHccccccCcccccCCccccc----ccc-eEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCch
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIH----KKA-KVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 155 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~ 155 (522)
.+++++++++++.... .+.+ ..+ ... ++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|
T Consensus 107 ~~~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp 183 (475)
T 1euh_A 107 IINYAAEEGLRMEGEV-LEGG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGS 183 (475)
T ss_dssp HHHHHHHHHTTCCEEE-EEGG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTH
T ss_pred HHHHHHHHHHHhcCCc-ccCC--CCCccccceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcCh
Confidence 9999999888775432 1211 112 345 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceE
Q 009919 156 WSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 232 (522)
Q Consensus 156 ~~~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~ 232 (522)
.++.++++++. ++|+|+|++++|+|++ +.+++|++ ++|+|+||||+.+|+.|++.++ ++|+++|||||||+
T Consensus 184 ~t~~~l~~ll~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa--~~~v~lElGGk~p~ 257 (475)
T 1euh_A 184 ISGLLLAEAFA----EAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSA 257 (475)
T ss_dssp HHHHHHHHHHH----HHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEEECCCCEEE
T ss_pred HHHHHHHHHHH----HhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC--CCcEEEEcCCcCeE
Confidence 99999888766 6899999999999975 57888987 7999999999999999999988 89999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHH
Q 009919 233 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN 312 (522)
Q Consensus 233 iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~ 312 (522)
||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++|||+++++++++.+
T Consensus 258 iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~ 336 (475)
T 1euh_A 258 IVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEG 336 (475)
T ss_dssp EECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccc-cCccCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998 999999999999999999
Q ss_pred HHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEE
Q 009919 313 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 392 (522)
Q Consensus 313 ~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v 392 (522)
++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||
T Consensus 337 ~i~~a~~~Ga~~~~gG~~-------~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v 409 (475)
T 1euh_A 337 LINDANDKGATALTEIKR-------EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASI 409 (475)
T ss_dssp HHHHHHHTTCEECSCCCE-------ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEE
T ss_pred HHHHHHHCCCEEEeCCcc-------CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEE
Confidence 999999999999999872 5899999999999999999999999999999999999999999999999999999
Q ss_pred ecCcHHHHHHHHHHhccCCeeecC-CcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 393 FSGSQHRAREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 393 ~s~d~~~~~~~~~~l~~G~v~IN~-~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
||+|.++++++++++++|+|+||+ +..+ .+.+||||+|.||+|++||++||++||+.|+|+.+
T Consensus 410 ~t~d~~~~~~~~~~l~~G~v~vN~~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 410 FTNDFPRAFGIAEQLEVGTVHINNKTQRG--TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp ECSCHHHHHHHHHHSCSSEEEESSCCCCC--STTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred EeCCHHHHHHHHHhCCEeeEEECCCCCCC--CCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence 999999999999999999999999 5443 35799999999999999999999999999999763
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-95 Score=770.49 Aligned_cols=444 Identities=22% Similarity=0.348 Sum_probs=410.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 31 ~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 109 (486)
T 1t90_A 31 KEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGIE 109 (486)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999985 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.+++++...+ ++..+..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 110 ~~~~~a~~~~-~~~g~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 186 (486)
T 1t90_A 110 NVEFAAGAPS-LMMGDSLASI--ATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEK 186 (486)
T ss_dssp HHHHHTTHHH-HHCEEEEEEE--ETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHH
T ss_pred HHHHHHHHHH-HhcCcccccC--CCCceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence 9999875433 3333322111 123456889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+++++. ++|+|+|++++|+|+.+.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++||
T Consensus 187 l~~l~~----~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dA 262 (486)
T 1t90_A 187 LVELFE----KAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLNDA 262 (486)
T ss_dssp HHHHHH----HTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTS
T ss_pred HHHHHH----HhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCCcEEeccCCCCcEEECCCC
Confidence 888766 689999999999997778899987 79999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCe-eEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAER-FYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~-v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
|++.|++.+++++|.|+||.|++++| ||||++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++++++
T Consensus 263 Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a 341 (486)
T 1t90_A 263 NLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKG 341 (486)
T ss_dssp CHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||... ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 342 ~~~Ga~~~~gg~~~---~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~ 418 (486)
T 1t90_A 342 LEEGARLVCDGREN---VSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNS 418 (486)
T ss_dssp HHHTCEEEECSSSS---CCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBH
T ss_pred HhCCCEEEeCCccC---CCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCH
Confidence 99999999999742 123689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC--CcchHHHHHhchhceEEEEc
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G--~~~g~~~l~~ft~~k~v~~~ 457 (522)
++++++++++++|+|+||++. +...+.+||||+|.||+| ++||++|+++||+.|+|+.+
T Consensus 419 ~~a~~~~~~l~aG~v~vN~~~-~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~ 479 (486)
T 1t90_A 419 NAIRYFRENIDAGMLGINLGV-PAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTAR 479 (486)
T ss_dssp HHHHHHHHHCCCSEEEESCSC-CCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEE
T ss_pred HHHHHHHHhCCcCeEEECCCC-CCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEe
Confidence 999999999999999999853 333457999999999999 89999999999999999864
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-95 Score=771.48 Aligned_cols=439 Identities=27% Similarity=0.451 Sum_probs=391.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+.++.++|.++|+++++.|+++.++|++++++|+||+..++...|+..+++
T Consensus 33 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~ 112 (478)
T 3ty7_A 33 EEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLN 112 (478)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996689999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.+.++.... .....++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+
T Consensus 113 ~~~~~a~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 184 (478)
T 3ty7_A 113 HFVAARDALDNYEFEE--------RRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVI 184 (478)
T ss_dssp HHHHHHHHHHHCCSEE--------EETTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHhhccc--------CCccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHH
Confidence 9999999888765432 12457889999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++. ++|+|+|++++|+|++ +.++.|+. .+|+|+||||+.+|+.|++.++++++|+++|||||||+||++|
T Consensus 185 l~~~~~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~d 260 (478)
T 3ty7_A 185 LAEIFD----KVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLDD 260 (478)
T ss_dssp HHHHHH----HHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTTCEEECCCCCCCEEEECTT
T ss_pred HHHHHH----HhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEecCCCCCcccCCC
Confidence 888766 6799999999999965 78899987 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++++++
T Consensus 261 ADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a 340 (478)
T 3ty7_A 261 VDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKG 340 (478)
T ss_dssp SCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||.... .....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 341 ~~~Ga~~~~gg~~~~-~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~ 419 (478)
T 3ty7_A 341 IEEGAELFYGGPGKP-EGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDK 419 (478)
T ss_dssp HHHTCEEEECCSSCC-TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCH
T ss_pred HHCCCEEEecCccCc-cccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCH
Confidence 999999999994221 1124789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
+.++++++++++|+|+||+ .. ..+.+||||+|.||+|++||++||++||+.|+|+
T Consensus 420 ~~a~~~~~~l~~G~v~vN~-~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~ 474 (478)
T 3ty7_A 420 ETLHKVARSIEAGTVEINE-AG--RKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474 (478)
T ss_dssp HHHHHHHHHSCSSEEEETT-CC------------------------CCGGGEEEEEEE
T ss_pred HHHHHHHHhCCcCeEEECC-CC--CCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEE
Confidence 9999999999999999999 22 3456899999999999999999999999999987
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-93 Score=768.05 Aligned_cols=457 Identities=21% Similarity=0.290 Sum_probs=418.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHh-HHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH-QELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~-~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
|+++++++.++.+++++++++|++|++.|+.++.++|.++|++++++|+++ +++|++++++|+||+..++...|+..++
T Consensus 88 ~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~ 167 (563)
T 4e3x_A 88 AHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELI 167 (563)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHH
T ss_pred CcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999998 9999999999999999999754499999
Q ss_pred HHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHH
Q 009919 80 EKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGC 159 (522)
Q Consensus 80 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~ 159 (522)
+.++++++.++++........+ .....+.++.|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++.
T Consensus 168 ~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~ 243 (563)
T 4e3x_A 168 DFFRFNAKFAVELEGEQPISVP---PSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASY 243 (563)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCT---TEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhhCCCccCCC---CCcceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHH
Confidence 9999999988877654332221 123345667778999999999999999999999999 599999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCc------eeeeCCCcc
Q 009919 160 FYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP------VTLELGGKD 230 (522)
Q Consensus 160 ~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~p------v~lelgGk~ 230 (522)
.+++++. ++|+|+|+||+|+|++ +.+++|++ ++|+|+||||+.+|+.|++.++++++| +++||||||
T Consensus 244 ~l~~ll~----eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~ 319 (563)
T 4e3x_A 244 AVYRILR----EAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKN 319 (563)
T ss_dssp HHHHHHH----HTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCE
T ss_pred HHHHHHH----HhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceeccCCCCC
Confidence 8888765 7899999999999976 57899987 899999999999999999999999985 999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCC-CCCCCcccccCCHHHHHH
Q 009919 231 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP-LAGKYDMGALCLLEHSEK 309 (522)
Q Consensus 231 p~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~-~~~~~~~g~li~~~~~~~ 309 (522)
|+||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|+++++++++|+| .++++++||++++.++++
T Consensus 320 p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~r 399 (563)
T 4e3x_A 320 FHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFAR 399 (563)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHH
T ss_pred ceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHH-cCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCC--HHHHHHHH-hcCC
Q 009919 310 LQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVKLA-NDSR 385 (522)
Q Consensus 310 ~~~~i~~a~~-~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~ 385 (522)
+.++|+++++ +|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+| +||||+++ |+++
T Consensus 400 v~~~i~~a~~~~ga~v~~GG~~~----~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~ 475 (563)
T 4e3x_A 400 IKKWLEHARSSPSLSILAGGQCN----ESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTS 475 (563)
T ss_dssp HHHHHHHHHHCTTEEEEECCCEE----CSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSS
T ss_pred HHHHHHHHhhcCCCEEEeCCccC----CCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCC
Confidence 9999999996 899999999732 24699999999999999999999999999999999997 79999999 7999
Q ss_pred CCceeEEecCcHHHHHHHHHHhc--cCCeeecCCcccCCCCCCCccCCCCCCCC-CcchHHHHHhchhceEEEEcccccc
Q 009919 386 YGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDRWWPY 462 (522)
Q Consensus 386 ~gL~a~v~s~d~~~~~~~~~~l~--~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~~l~~ft~~k~v~~~~~~~~ 462 (522)
|||++||||+|.+.+++++++++ +|+|+||+..+....+.+||||+|.||+| +.+|.+++++|+..|+|..+ +
T Consensus 476 yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~-~--- 551 (563)
T 4e3x_A 476 YGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKET-H--- 551 (563)
T ss_dssp EESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEE-C---
T ss_pred CCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEEEEEe-C---
Confidence 99999999999999999999976 99999999876655567999999999998 89999999999999999875 3
Q ss_pred cccCCCCCCCCCCC
Q 009919 463 IKTKIPKPIQYPVA 476 (522)
Q Consensus 463 ~~~~~~~~~~~p~~ 476 (522)
..+.++|||+.
T Consensus 552 ---~~~~~~~yp~~ 562 (563)
T 4e3x_A 552 ---KPLGDWRYSYM 562 (563)
T ss_dssp ---SCCCCSSCTTC
T ss_pred ---cCCCcccCCCC
Confidence 23567899974
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-91 Score=744.81 Aligned_cols=437 Identities=22% Similarity=0.340 Sum_probs=406.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+++++++++|++|+..|+.++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 30 g~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~ 108 (490)
T 3ju8_A 30 QGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESA-TEVTSMVN 108 (490)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++..+++....... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 184 (490)
T 3ju8_A 109 KVAISVQAFRERTGEKSGP----LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAEL 184 (490)
T ss_dssp HHHHHHHHHHHHSCCEEEE----ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCCcccc----CCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHH
Confidence 9999988776654432211 113455778999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCce-eeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPV-TLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv-~lelgGk~p~iV~~d 237 (522)
+++++. ++|+|+|++++|+|+.+.+++|++ ++|+|+||||+.+|+.|++.++++++|+ ++|||||||+||++|
T Consensus 185 l~~l~~----~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lElGGk~p~iV~~d 260 (490)
T 3ju8_A 185 TLKAWI----QAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVEEV 260 (490)
T ss_dssp HHHHHH----HTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEECCCCEEEEECCC
T ss_pred HHHHHH----HhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCcEEeecCCCCeEEECCC
Confidence 887765 789999999999997788999997 7999999999999999999999999998 899999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhh-HHHHHHHHHHHHHhccCCC-CCCCCCcccccCCHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIVKSVSAGP-PLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i-~d~f~~~L~~~~~~~~~g~-~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
||++.|++.+++++|.|+||.|++++++|||+++ +|+|+++|+++++++++|+ |.++++++|||+++++++++.++++
T Consensus 261 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~ 340 (490)
T 3ju8_A 261 ADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQE 340 (490)
T ss_dssp SCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999996 9999999999999999999 9999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
+++++|+++++||... +..|+|++|||+. ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 341 ~a~~~Ga~~~~gg~~~----~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~ 415 (490)
T 3ju8_A 341 HLIGKGAQPLLAMTQP----IDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSD 415 (490)
T ss_dssp HHHHTTCEEEECCCCC----STTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECS
T ss_pred HHHHCCCEEEECCCcc----CCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcC
Confidence 9999999999999743 2578999999998 9999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
|.++++++++++++|+|+||++.... .+.+||||+|.||++ ++++||+.|+|+...
T Consensus 416 d~~~a~~~~~~l~aG~v~vN~~~~~~-~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 416 SRERFEQFLVESRAGIVNWNKQLTGA-ASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp CHHHHHHHHHHCCSSEEEESSCSSCC-CTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred CHHHHHHHHHhcCcceEEECCCcCCC-CCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 99999999999999999999976533 456999999999985 489999999998653
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-90 Score=778.57 Aligned_cols=445 Identities=22% Similarity=0.370 Sum_probs=416.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+.+|.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 556 ~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~aid 634 (1026)
T 4f9i_A 556 SEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAY-ADVTEAID 634 (1026)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHH
T ss_pred CceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHH-HHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999985 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|++..++++..+..... ..+..+++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 635 ~lr~~a~~~~~~~~~~~~~~---~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~ 711 (1026)
T 4f9i_A 635 FLEYYAREMIRLGQPQRVGH---APGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWH 711 (1026)
T ss_dssp HHHHHHHHHHHHTSCEEECC---CTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHhcCCccccC---CCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHH
Confidence 99999998887765443221 134567899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHh------cCCCceeeeCCCcce
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS------KTLTPVTLELGGKDA 231 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa------~~~~pv~lelgGk~p 231 (522)
+++++. ++|+|+|+||+|+|++ +.+++|++ .+|.|+||||+.+|+.|++.++ ++++|+++|+|||||
T Consensus 712 l~ell~----eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp 787 (1026)
T 4f9i_A 712 LVELFR----EAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNA 787 (1026)
T ss_dssp HHHHHH----HTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEE
T ss_pred HHHHHH----HhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCe
Confidence 888765 7899999999999975 67899987 8999999999999999999998 578999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHH
Q 009919 232 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 311 (522)
Q Consensus 232 ~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~ 311 (522)
+||++|||++.|++.+++|+|.|+||.|+|+++||||++++|+|+++|+++++++++|+|.++++++||+|++.+++++.
T Consensus 788 ~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~ 867 (1026)
T 4f9i_A 788 IIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIK 867 (1026)
T ss_dssp EEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeE
Q 009919 312 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 391 (522)
Q Consensus 312 ~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~ 391 (522)
++|++++++| ++++||... ...|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 868 ~~i~~a~~~G-~~v~gG~~~----~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~ 942 (1026)
T 4f9i_A 868 EYAEIGKREG-HVLYESPVP----AGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGG 942 (1026)
T ss_dssp HHHHHHHHHS-EEEEECCCC----SSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEE
T ss_pred HHHHHHHhCC-eEEecCCcC----CCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEE
Confidence 9999999998 999999732 12499999999999999999999999999999999999999999999999999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCC-cchHHHHHhchhceEEEEcc
Q 009919 392 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 392 v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~-~~g~~~l~~ft~~k~v~~~~ 458 (522)
|||+|.+.++++++++++|+|+||+.+++...+.+||||+|.||+|+ .+|++++++||+.|+|..+.
T Consensus 943 V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 943 IFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp EECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred EECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEec
Confidence 99999999999999999999999998776666679999999999995 57999999999999998764
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-90 Score=742.21 Aligned_cols=449 Identities=17% Similarity=0.234 Sum_probs=399.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHH-HHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a-~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
|+++++++.++ +++++++++|++| |+.|+.++.++|.++|++++++|++++++|++++++|+||+..++. .|+..++
T Consensus 32 g~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 109 (534)
T 2y53_A 32 GVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGI 109 (534)
T ss_dssp CCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 68999999987 8999999999999 5999999999999999999999999999999999999999999986 5999999
Q ss_pred HHHHHHHHcccccc------CcccccCCcccccccceEEEeec-eEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCC
Q 009919 80 EKITWLLSEGEKWL------KPEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 152 (522)
Q Consensus 80 ~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~P~-GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 152 (522)
+.+++++..++++. .++..+... ......++.++|+ |||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 110 ~~~~~~a~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~ 188 (534)
T 2y53_A 110 FTLSYYAKLGASLGEVHALRDGSAESLSK-DRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPAT 188 (534)
T ss_dssp HHHHHHHHHHHTTCSCSEEEEEEEEECST-TSSEEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCG
T ss_pred HHHHHHHHHHHhccccccccCCccccCCC-CCcccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 99999887654432 111111110 0111357889997 999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHhcC-CCCCcEeeecCcch-hhhhHhcCccEEEEeCCHHHHHHHHHHHh--cCCCceeeeCCC
Q 009919 153 NASWSGCFYFRIIQAALAAVG-APENLVDVITGFAE-TGEALVSSVDKIIFVGSPGVGRMIMRNAS--KTLTPVTLELGG 228 (522)
Q Consensus 153 ~~~~~~~~l~~~~~~~l~~ag-~p~g~v~vv~g~~~-~~~~L~~~vd~V~ftGS~~~g~~v~~~aa--~~~~pv~lelgG 228 (522)
.+|+++..+++++. ++| +|+|+||+|+|+++ .++.| ..+|+|+||||+.+|+.|++.++ +++||+++||||
T Consensus 189 ~tp~~~~~l~~l~~----~aG~lP~gvv~vv~g~~~~l~~~l-~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGG 263 (534)
T 2y53_A 189 ATAWLTQRMVADVV----DAGILPPGALSIICGSSAGLLDQI-RSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADS 263 (534)
T ss_dssp GGHHHHHHHHHHHH----HHTCSCTTSEEECCSCCTTSGGGC-CTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCC
T ss_pred cchHHHHHHHHHHH----HhCCCCCCeEEEEeCChHHHHhcc-cccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCC
Confidence 99999998888765 689 79999999999653 34433 27899999999999999998875 899999999999
Q ss_pred cceEEEcCCC-----CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCC
Q 009919 229 KDAFIVCDDV-----DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 303 (522)
Q Consensus 229 k~p~iV~~da-----Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~ 303 (522)
|||+||++|| ||+.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||++
T Consensus 264 k~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~ 343 (534)
T 2y53_A 264 LNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVS 343 (534)
T ss_dssp CEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSC
T ss_pred CCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCC
Confidence 9999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCcEeeccCCCCC--CCCCCCcccccEEEecCCCC--CcccccccccceeeeeecC---CH--
Q 009919 304 LEHSEKLQNLVNDALDKGAEILARGSFGHL--SEGAVDQYFPPTVIVNVNHT--MKLMQEEAFGPIMPIMKFN---TD-- 374 (522)
Q Consensus 304 ~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~--~~~~~~~~~~Ptvl~~~~~~--~~i~~~E~fgPvl~v~~~~---~~-- 374 (522)
+.+++++.++|+++ .+|+++++||..... .....|+|++|||+.+++++ |.+++||+||||++|++|+ |+
T Consensus 344 ~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~ 422 (534)
T 2y53_A 344 REQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNA 422 (534)
T ss_dssp HHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---
T ss_pred HHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCccc
Confidence 99999999999999 689999999973210 01135899999999999877 6899999999999999999 99
Q ss_pred ---HHHHHHHhcCCCCceeEEecCcHHHHHHHHHHh--ccCCeeecCCccc-------CCCCCCCccCCCCCCCCCc-ch
Q 009919 375 ---EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI--QCGVAAINDFASN-------YMCQSLPFGGVKDSGFGRF-AG 441 (522)
Q Consensus 375 ---~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l--~~G~v~IN~~~~~-------~~~~~~PfGG~~~SG~G~~-~g 441 (522)
||||+++|+++|||++||||+|.++++++++++ ++|+|+||++... ...+.+||||+|.||+|++ +|
T Consensus 423 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g 502 (534)
T 2y53_A 423 LPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGG 502 (534)
T ss_dssp CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESG
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcch
Confidence 999999999999999999999999999999999 8999999986431 2345799999999999999 69
Q ss_pred HHHHHhchhceEEEEcc
Q 009919 442 VEGLRACCLVKSVVEDR 458 (522)
Q Consensus 442 ~~~l~~ft~~k~v~~~~ 458 (522)
.+|+++|++.|+|...+
T Consensus 503 ~~~l~~~~~~k~v~~~p 519 (534)
T 2y53_A 503 LRALAFYHRRSAIQAAS 519 (534)
T ss_dssp GGGGGGGEEEEEEEEEH
T ss_pred HHHHHHHhhhheeecCH
Confidence 99999999999998765
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-88 Score=727.96 Aligned_cols=438 Identities=19% Similarity=0.225 Sum_probs=398.0
Q ss_pred CceeE-EecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLG-YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~-~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
||+++ +++.++.+++++++++|++|+..|++++.++|.++|++++++|++++++|++++++|+||+..++. .|+..++
T Consensus 50 g~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 128 (528)
T 3v4c_A 50 AHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLN-GERGRTT 128 (528)
T ss_dssp SSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 67888 999999999999999999999999999999999999999999999999999999999999999885 6999999
Q ss_pred HHHHHHHHcccc--ccCcccc---cCCcccccccceEEEeeceEEEEEccCchhhhhhh--HHHHHHhhcCCEEEEecCC
Q 009919 80 EKITWLLSEGEK--WLKPEYR---SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF--NPMLAAVFSGNGIVIKVSE 152 (522)
Q Consensus 80 ~~l~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~--~~~~~ALaaGN~VvlKps~ 152 (522)
+.++++++.+++ |..+... +......+...+++++|+|||++|+|||||+.+.+ +++++||++||+||+|||+
T Consensus 129 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~ 208 (528)
T 3v4c_A 129 GQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHS 208 (528)
T ss_dssp HHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCT
T ss_pred HHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCC
Confidence 999999988776 4432211 11000123456889999999999999999999865 8999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCC--CceeeeCC
Q 009919 153 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL--TPVTLELG 227 (522)
Q Consensus 153 ~~~~~~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~--~pv~lelg 227 (522)
.+|.++..+++++.++|.++|+|+|+||+|+|++ +.+++|++ .+|+|+||||+.+|+.|++.+++++ +|+++|||
T Consensus 209 ~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lElG 288 (528)
T 3v4c_A 209 AHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELG 288 (528)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECC
T ss_pred CCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEecC
Confidence 9999999999999999999999999999999965 78899987 8999999999999999999999999 99999999
Q ss_pred CcceEEEcCCC---CHHHHHHHHHHHHHHcCCCCcccCCeeEEchh-hHHHHHHHHHHHHHhccCCCCCCCCCcccccCC
Q 009919 228 GKDAFIVCDDV---DVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 303 (522)
Q Consensus 228 Gk~p~iV~~da---Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~-i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~ 303 (522)
||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ ++|+|+++|++++++++. ++.+||+++
T Consensus 289 Gk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~------~~~~gp~~~ 362 (528)
T 3v4c_A 289 SVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAP------QTMLTDGIA 362 (528)
T ss_dssp CCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCC------EECSCHHHH
T ss_pred CCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHHHHHHHHHHHhccc------CCCCCHHHH
Confidence 99999999999 88999999999999999999999999999997 999999999999999864 357899998
Q ss_pred HHHHHHHHHHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCC---CcccccccccceeeeeecCCHHHHHHH
Q 009919 304 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT---MKLMQEEAFGPIMPIMKFNTDEEVVKL 380 (522)
Q Consensus 304 ~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~---~~i~~~E~fgPvl~v~~~~~~~eai~~ 380 (522)
.++.+++.++++ ++|+++++||. ..|+|++|||+.+++++ |++++||+||||++|++|+|+||||++
T Consensus 363 ~~~~~~v~~~~~---~~Ga~v~~gG~-------~~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~ 432 (528)
T 3v4c_A 363 KAYRDGQARFAT---RNAVKPLLATE-------SSGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEEL 432 (528)
T ss_dssp HHHHHHHHHHHT---CTTCEEEECCC-------CCTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHH
T ss_pred HHHHHHHHHHHH---hCCCEEEeCCC-------cCCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHH
Confidence 888887777764 37999999997 26899999999988887 899999999999999999999999999
Q ss_pred HhcCCCCceeEEecC--cHHHHHHHHHHhc--cCCeeecCCcccC-CCCCCCccC-CCCCCCCCcc--hHHHHHhchhce
Q 009919 381 ANDSRYGLGCAVFSG--SQHRAREIAAQIQ--CGVAAINDFASNY-MCQSLPFGG-VKDSGFGRFA--GVEGLRACCLVK 452 (522)
Q Consensus 381 ~n~~~~gL~a~v~s~--d~~~~~~~~~~l~--~G~v~IN~~~~~~-~~~~~PfGG-~~~SG~G~~~--g~~~l~~ft~~k 452 (522)
+|+++|||++||||+ |.+++++++++++ +|+|+||++.+.. ..+.+|||| +|.||+|++| |++|+++||+.|
T Consensus 433 aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k 512 (528)
T 3v4c_A 433 ARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPV 512 (528)
T ss_dssp HHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEE
T ss_pred HhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhH
Confidence 999999999999999 8899999999998 9999999976532 346799999 9999999987 999999999999
Q ss_pred EEE
Q 009919 453 SVV 455 (522)
Q Consensus 453 ~v~ 455 (522)
++.
T Consensus 513 ~~q 515 (528)
T 3v4c_A 513 AYQ 515 (528)
T ss_dssp EEE
T ss_pred Hhh
Confidence 864
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-88 Score=720.02 Aligned_cols=436 Identities=17% Similarity=0.219 Sum_probs=394.3
Q ss_pred Ccee-EEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYL-GYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i-~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
|+++ ++++.++.+++++++++|++|++.|++++.++|.++|++++++|++++++|++++++|+||+..++ ..|+..++
T Consensus 17 g~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~Ev~~~~ 95 (510)
T 1ez0_A 17 GEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRL-TGEIARTA 95 (510)
T ss_dssp SSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHH
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHH
Confidence 6889 799999999999999999999999999999999999999999999999999999999999999887 47999999
Q ss_pred HHHHHHHHcccc--ccCccccc-CCcc-ccc-ccceEEEeeceEEEEEccCchhhhhh--hHHHHHHhhcCCEEEEecCC
Q 009919 80 EKITWLLSEGEK--WLKPEYRS-SGRS-MIH-KKAKVEFHPLGVVGAIVSWNYPFHNI--FNPMLAAVFSGNGIVIKVSE 152 (522)
Q Consensus 80 ~~l~~~~~~~~~--~~~~~~~~-~~~~-~~~-~~~~~~~~P~GVv~vi~p~N~P~~~~--~~~~~~ALaaGN~VvlKps~ 152 (522)
+.++++++.+++ |+.+.... .+.. ..+ ...+++++|+|||++|+|||||+.+. .+++++||++||+||+|||+
T Consensus 96 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps~ 175 (510)
T 1ez0_A 96 NQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHT 175 (510)
T ss_dssp HHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCT
T ss_pred HHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECCC
Confidence 999999988875 55432100 0000 001 13578999999999999999999985 49999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHhcCCCCCcEeeecCc-chhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCC--CceeeeCC
Q 009919 153 NASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL--TPVTLELG 227 (522)
Q Consensus 153 ~~~~~~~~l~~~~~~~l~~ag~p~g~v~vv~g~-~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~--~pv~lelg 227 (522)
.+|+++.++++++.++|.++|+|+|++|+|+|+ .+.+++|++ .+|+|+||||+.+|+.|++.+++++ ||+++|||
T Consensus 176 ~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~l~~~pv~lELG 255 (510)
T 1ez0_A 176 AHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELG 255 (510)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECC
T ss_pred CchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhccCCCccEEEECC
Confidence 999999999999999999999999999999995 467899987 7999999999999999999999986 99999999
Q ss_pred CcceEEEcCCCCHH--HHHHHHHHHHHHcCCCCcccCCeeEEchh-hHHHHHHHHHHHHHhccCCCCCCCCCcccccCCH
Q 009919 228 GKDAFIVCDDVDVP--HVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 304 (522)
Q Consensus 228 Gk~p~iV~~daDl~--~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~-i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~ 304 (522)
||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++ ||++++
T Consensus 256 Gk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~----------gp~~~~ 325 (510)
T 1ez0_A 256 AINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP----------STLLTP 325 (510)
T ss_dssp CCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC----------BCCSSH
T ss_pred CCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC----------CCCCCH
Confidence 99999999999999 99999999999999999999999999998 999999999999999863 578889
Q ss_pred HHHHHHHHHHHHHHH-cCCcEeeccCCCCCCCCCCCcccccEEEecCCCC---CcccccccccceeeeeecCCHHHHHHH
Q 009919 305 EHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT---MKLMQEEAFGPIMPIMKFNTDEEVVKL 380 (522)
Q Consensus 305 ~~~~~~~~~i~~a~~-~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~---~~i~~~E~fgPvl~v~~~~~~~eai~~ 380 (522)
.+.+++.++++++++ +|+++++||. +|+|++|||+.+++++ |++++||+||||++|++|+|+||||++
T Consensus 326 ~~~~~~~~~v~~~~~~~Ga~~~~gg~--------~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~ 397 (510)
T 1ez0_A 326 GIRDSYQSQVVSRGSDDGIDVTFSQA--------ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSL 397 (510)
T ss_dssp HHHHHHHHHHHHHHTSTTEEEEECCC--------CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCEEEecCC--------CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHH
Confidence 999999999999984 7999999986 2899999999988777 999999999999999999999999999
Q ss_pred HhcCCCCceeEEecCcH--HHHHHHHHHh--ccCCeeecCCcccC-CCCCCCccC-CCCCCCCCc--chHHHHHhchhce
Q 009919 381 ANDSRYGLGCAVFSGSQ--HRAREIAAQI--QCGVAAINDFASNY-MCQSLPFGG-VKDSGFGRF--AGVEGLRACCLVK 452 (522)
Q Consensus 381 ~n~~~~gL~a~v~s~d~--~~~~~~~~~l--~~G~v~IN~~~~~~-~~~~~PfGG-~~~SG~G~~--~g~~~l~~ft~~k 452 (522)
+|+++|||++||||+|. ++++++++++ ++|+|+||++.... ..+.+|||| +|.||+|+. +|++||++|++.|
T Consensus 398 aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k 477 (510)
T 1ez0_A 398 SEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPV 477 (510)
T ss_dssp HHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEE
T ss_pred HhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEE
Confidence 99999999999999987 7899999999 79999999875432 234699999 799999854 8999999999888
Q ss_pred EEE
Q 009919 453 SVV 455 (522)
Q Consensus 453 ~v~ 455 (522)
++.
T Consensus 478 ~~~ 480 (510)
T 1ez0_A 478 AYQ 480 (510)
T ss_dssp EEE
T ss_pred EEc
Confidence 764
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-87 Score=755.32 Aligned_cols=435 Identities=22% Similarity=0.347 Sum_probs=403.2
Q ss_pred ecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHH
Q 009919 7 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLL 86 (522)
Q Consensus 7 v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~ 86 (522)
++.++.+++++++++|++|+..|+.+|.++|.++|+++++.|+++.++|++++++|+||+..++. .|+..+++.++|++
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~~a 622 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYA 622 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999985 79999999999999
Q ss_pred HccccccCcc-cccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHH
Q 009919 87 SEGEKWLKPE-YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 165 (522)
Q Consensus 87 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~ 165 (522)
...+++.... ..+.+ .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++
T Consensus 623 ~~a~~~~g~~~~~~~~---~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell 699 (1001)
T 3haz_A 623 AQGRKLFGSETAMPGP---TGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALL 699 (1001)
T ss_dssp HHHHHHHSSCEECCCC---TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHhhcCccccccCC---CCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHH
Confidence 9887765432 12211 3467789999999999999999999999999999999999999999999999999888876
Q ss_pred HHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcC---CCceeeeCCCcceEEEcCCCCH
Q 009919 166 QAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT---LTPVTLELGGKDAFIVCDDVDV 240 (522)
Q Consensus 166 ~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~---~~pv~lelgGk~p~iV~~daDl 240 (522)
. ++|+|+|+||+|+|+++.++.|++ .||+|+||||+.+|+.|++.++++ ++|+++|+|||||+||++|||+
T Consensus 700 ~----eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADl 775 (1001)
T 3haz_A 700 H----EAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALP 775 (1001)
T ss_dssp H----HHTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCH
T ss_pred H----HhCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCH
Confidence 5 679999999999998755999987 799999999999999999998864 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc
Q 009919 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK 320 (522)
Q Consensus 241 ~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~ 320 (522)
+.|++.+++|+|.|+||.|+|+++||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|+++.++
T Consensus 776 d~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~ 855 (1001)
T 3haz_A 776 EQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTE 855 (1001)
T ss_dssp HHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCC--HHHHHHHHhcCCCCceeEEecCcHH
Q 009919 321 GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVKLANDSRYGLGCAVFSGSQH 398 (522)
Q Consensus 321 Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gL~a~v~s~d~~ 398 (522)
| ++ +||.. +..|+|++|||+.+ +++.+++||+||||++|++|++ +||||+++|+++|||++||||+|.+
T Consensus 856 g-~v-~gg~~-----~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~ 926 (1001)
T 3haz_A 856 A-RL-HFAGP-----APEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDD 926 (1001)
T ss_dssp S-EE-EEECC-----CCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHH
T ss_pred C-eE-ecccc-----CCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHH
Confidence 8 88 88873 24599999999974 6889999999999999999996 7999999999999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCC-cchHHHHHhchhceEEEEcc
Q 009919 399 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 399 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~-~~g~~~l~~ft~~k~v~~~~ 458 (522)
.++++++++++|+|+||+...+...+.+||||+|.||+|+ .+|++|+++||+.|+|+.+.
T Consensus 927 ~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 927 SIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp HHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred HHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 9999999999999999998776656678999999999995 67899999999999998764
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-81 Score=662.65 Aligned_cols=422 Identities=18% Similarity=0.197 Sum_probs=375.6
Q ss_pred EEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHH
Q 009919 5 GYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITW 84 (522)
Q Consensus 5 ~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~ 84 (522)
.+++..+.+++++++++|++||+.|++++.++|.++|+++++.|.+++++|++++++|+||+..++...+....++.+..
T Consensus 4 ~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~ 83 (464)
T 3k9d_A 4 EDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYN 83 (464)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHH
Confidence 45566788999999999999999999999999999999999999999999999999999999988865566555665554
Q ss_pred HHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHH
Q 009919 85 LLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRI 164 (522)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~ 164 (522)
+++..+.. .... ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++++
T Consensus 84 ~~~~~~~~---g~~~---~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~l 157 (464)
T 3k9d_A 84 YIKDMKTI---GMLK---EDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRI 157 (464)
T ss_dssp HHTTCCCS---EEEE---EETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHH
T ss_pred hhhccccc---ceec---cCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHH
Confidence 44332110 0111 01345678899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcEeeecCc-chhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCC-CcceEEEcCCCCH
Q 009919 165 IQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG-GKDAFIVCDDVDV 240 (522)
Q Consensus 165 ~~~~l~~ag~p~g~v~vv~g~-~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelg-Gk~p~iV~~daDl 240 (522)
+.+++.++|+|+|+|++|+|. .+.+++|++ ++|+|+||||+. +++.+++++||+ +|+| ||||+||++|||+
T Consensus 158 l~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~~dADl 232 (464)
T 3k9d_A 158 ISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIERSANI 232 (464)
T ss_dssp HHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEECTTSCH
T ss_pred HHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEECCCCCH
Confidence 999999999999999999996 478899988 799999999998 467788899999 7888 9999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHH-------HhccCCCCC-CCCCcccccCCHHHHHHHHH
Q 009919 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV-------KSVSAGPPL-AGKYDMGALCLLEHSEKLQN 312 (522)
Q Consensus 241 ~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~-------~~~~~g~~~-~~~~~~g~li~~~~~~~~~~ 312 (522)
+.|++.|++|+|.|+||.|+++++||||+++||+|+++|+++. +.+++|++. ++++++||+++.++++++.+
T Consensus 233 ~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~ 312 (464)
T 3k9d_A 233 PRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIAN 312 (464)
T ss_dssp HHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999986 345677776 67889999999999999999
Q ss_pred HHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHH----HHHhcCCCCc
Q 009919 313 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVV----KLANDSRYGL 388 (522)
Q Consensus 313 ~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gL 388 (522)
+++.++.+|+++++||.. ++++++++. +|+||||++|++|+|+|||| +++|+++|||
T Consensus 313 ~~~~a~~~ga~vl~gg~~------------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl 373 (464)
T 3k9d_A 313 LAGLTVPADARVLIAEET------------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGH 373 (464)
T ss_dssp HTTCCCCTTCCEEEEECC------------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEE
T ss_pred HhhhhhcCCCEEEEcCCC------------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCC
Confidence 999888889999999861 567788865 89999999999999999997 7999999999
Q ss_pred eeEEecCcHHHHHHHHHHhccCCeeecCCccc-------CCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 389 GCAVFSGSQHRAREIAAQIQCGVAAINDFASN-------YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 389 ~a~v~s~d~~~~~~~~~~l~~G~v~IN~~~~~-------~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
++||||+|.+.++++++++++|+|+||++..+ ...+.+|||| |.||.|.++|..|+++|++.|+|.+.
T Consensus 374 ~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 374 TLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp EEEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred eEEEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 99999999999999999999999999998653 2457899998 88999999999999999999999763
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-81 Score=660.15 Aligned_cols=402 Identities=16% Similarity=0.180 Sum_probs=336.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc-------CCChh----h
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT-------GKTMV----D 69 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~-------Gk~~~----e 69 (522)
|+++++++.++.+++++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+ ||+.. +
T Consensus 17 g~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~~ 96 (463)
T 2h5g_A 17 NLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLSL 96 (463)
T ss_dssp ------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTTCC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhhhh
Confidence 688999999999999999999999999999999999999999999999999999999999999 69987 3
Q ss_pred hhhhHHHHHHHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEe
Q 009919 70 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 149 (522)
Q Consensus 70 a~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlK 149 (522)
+. .|+..+++.++++++.++++.... .+......+...+++++|+|||++|+||| |+..+ +++++||++||+||+|
T Consensus 97 a~-~ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlK 172 (463)
T 2h5g_A 97 ST-SKLNSLAIGLRQIAASSQDSVGRV-LRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLK 172 (463)
T ss_dssp CH-HHHHHHHHHHHHHHHHCTTSTTCE-EEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEE
T ss_pred hH-HHHHHHHHHHHHHHHhhHhhcCcc-cccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEE
Confidence 53 799999999999998888876543 11111012345689999999999999777 77766 7999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCC
Q 009919 150 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 227 (522)
Q Consensus 150 ps~~~~~~~~~l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelg 227 (522)
||+.+|.++..+++++.++|.++| |+|+|++|+|+.+.++.|+. .+|+|+||||+.+|+.|++.++ +||+++|||
T Consensus 173 ps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv~lElG 249 (463)
T 2h5g_A 173 GGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPVMGHSE 249 (463)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCBCSCSC
T ss_pred CCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCEEEecC
Confidence 999999999999999999988889 99999999996577888987 7999999999999999999888 999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHH
Q 009919 228 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 307 (522)
Q Consensus 228 Gk~p~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~ 307 (522)
||||+||++|||++.|++.+++++|.| ||.|++++|||||++++| ||+ +
T Consensus 250 Gk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~p~-----~ 298 (463)
T 2h5g_A 250 GICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------TPL-----F 298 (463)
T ss_dssp CCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------SHH-----H
T ss_pred CcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------hHH-----H
Confidence 999999999999999999999999999 999999999999999998 232 2
Q ss_pred HHHHHHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCC
Q 009919 308 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 387 (522)
Q Consensus 308 ~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 387 (522)
+ +++++++++|++++.|+.. ...++|+ +++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 299 ~---~~i~~~~~~Ga~v~~G~~~-----~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~g 362 (463)
T 2h5g_A 299 D---QIIDMLRVEQVKIHAGPKF-----ASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSS 362 (463)
T ss_dssp H---HHHHHHHHTTCEEEECHHH-----HC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCS
T ss_pred H---HHHHHHHhCCCEEEeCCcc-----cccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCC
Confidence 3 3577778899999855431 1123332 5789999999999999999999999999999999999
Q ss_pred ceeEEecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC--Cc--chHHHHHhchhceEEEEcc
Q 009919 388 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RF--AGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 388 L~a~v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G--~~--~g~~~l~~ft~~k~v~~~~ 458 (522)
|++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+| ++ +|++||++||+.|+|+...
T Consensus 363 Laa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 363 HTDVIVTEDENTAEFFLQHVDSACVFWNASTRF--SDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp SEEEEECSCHHHHHHHHHHCCSSEEEESSCGGG--CSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred ceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccC--CCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 999999999999999999999999999997653 356999999999999 76 9999999999999998764
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-80 Score=655.87 Aligned_cols=400 Identities=15% Similarity=0.137 Sum_probs=325.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhhhhHHHH-HHHHHHHHHHc
Q 009919 14 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASLGEIMT-TCEKITWLLSE 88 (522)
Q Consensus 14 ~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~----~ea~~~Ei~~-~~~~l~~~~~~ 88 (522)
.+++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+||+. .++...|+.. +++.++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999998 7875578888 88899999888
Q ss_pred cccccCcccccCCc---c--cccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHH
Q 009919 89 GEKWLKPEYRSSGR---S--MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 163 (522)
Q Consensus 89 ~~~~~~~~~~~~~~---~--~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~ 163 (522)
++++..+....... . ..+...+++++|+|||++|+||| | .+.++++++||++||+||+|||+.+|.++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 87776432210010 0 01345689999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHHHHHHh----cCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 164 IIQAALAA----VGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 164 ~~~~~l~~----ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
++.++|.+ +|+|+|++|+|+ +. +.++.|+. .+|+|+||||+.+|+.|++.+ +||+++|||||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 99989999 999999999999 65 67888887 799999999999999999877 699999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccC---CCCCCCCCcccccCCHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGKYDMGALCLLEHSEKLQNL 313 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~---g~~~~~~~~~g~li~~~~~~~~~~~ 313 (522)
|||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|+++++++++ |+|.+ .++
T Consensus 249 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~ 309 (468)
T 1vlu_A 249 DADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTA 309 (468)
T ss_dssp TCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHH
T ss_pred CCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hcc
Confidence 99999999999999999999 99999999999999 9999999999999986 66421 344
Q ss_pred -HHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEE
Q 009919 314 -VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 392 (522)
Q Consensus 314 -i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v 392 (522)
++++. ++++||. | ++||++ ++++|.+++||+||||++|++|+|+||||+++|+++|||++||
T Consensus 310 ~i~~a~----~~~~gG~---------g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v 372 (468)
T 1vlu_A 310 YFDKLN----ELGKLTE---------A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAI 372 (468)
T ss_dssp HHHHHH----HHTCCCH---------H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEE
T ss_pred cccccc----eeeccCC---------C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEE
Confidence 66654 4666664 3 689887 7889999999999999999999999999999999999999999
Q ss_pred ecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCcc-----CCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 393 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFG-----GVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 393 ~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfG-----G~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
||+|.+.++++++++++|+|+||++... .+.+||| |+|.||+|++ |++|+++||+.|+|+...
T Consensus 373 ~t~d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 373 VTENKANAEKFMKGVDSSGVYWNASTRF--ADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp ECSCHHHHHHHHHHCCCSEEEESSCGGG--CC-----------------------CCSGGGEEEEEEEECS
T ss_pred EeCCHHHHHHHHHhCCeeEEEEcCCCCC--CCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 9999999999999999999999997653 3468999 9999999999 999999999999998754
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-77 Score=628.39 Aligned_cols=393 Identities=19% Similarity=0.218 Sum_probs=330.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhhh-------hHHHHHHH
Q 009919 12 RAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASL-------GEIMTTCE 80 (522)
Q Consensus 12 ~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~----~ea~~-------~Ei~~~~~ 80 (522)
.+++++++++|++|++.|+.+|.++|.++|+++++.|.++.++|++++++|+||+. .++.. .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999985 35543 37888888
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.+++++...+.. . ...+......+...+++++|+|||++|+||| | .+.++++++||++||+||+|||+.+|.++..
T Consensus 105 ~l~~~a~~~~~~-g-~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 180 (444)
T 4ghk_A 105 GLRQVATLPDPI-G-EMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTA 180 (444)
T ss_dssp HHHHHHHSCCCT-T-CEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHhhcccc-C-ccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 899888765431 1 1111100112356789999999999999998 8 5889999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCc-ch-hhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGF-AE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~-~~-~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
+++++.++|.++|+|+|++++|+|+ .+ .++.|.. .+|+|+||||+.+|+.|++.+ +||+++|||||||+||++
T Consensus 181 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~ 257 (444)
T 4ghk_A 181 LAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDD 257 (444)
T ss_dssp HHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECC
Confidence 9999999999999999999999984 33 5677765 799999999999999999876 699999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccC---CCCCCCCCcccccCCHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGKYDMGALCLLEHSEKLQNL 313 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~---g~~~~~~~~~g~li~~~~~~~~~~~ 313 (522)
|||++.|++.+++++|.|+| .|++++|||||++++|+|+++|+++++++++ |+|. ..++
T Consensus 258 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~ 319 (444)
T 4ghk_A 258 RASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAV 319 (444)
T ss_dssp TCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHH
T ss_pred CCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHH
Confidence 99999999999999999999 9999999999999999999999999999887 5431 1345
Q ss_pred HHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEe
Q 009919 314 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 393 (522)
Q Consensus 314 i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~ 393 (522)
++++. .| ++ ++++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 320 i~~a~-------------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 372 (444)
T 4ghk_A 320 LEAAG-------------------VG------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIV 372 (444)
T ss_dssp HHHTT-------------------CC------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEE
T ss_pred HHhcc-------------------cC------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEE
Confidence 55431 01 11 34678999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC----CcchHHHHHhchhceEEEEcc
Q 009919 394 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG----RFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 394 s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G----~~~g~~~l~~ft~~k~v~~~~ 458 (522)
|+|.++++++++++++|+|+||++... .+.+||||.+.||+| +++|++||++||+.|+|+...
T Consensus 373 t~d~~~a~~~a~~l~aG~V~vN~~~~~--~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 373 TEDHDRAMRFLREVDSASVMVNASTRF--ADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp CSBHHHHHHHHHHCCSSEEEEEECGGG--CSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred eCCHHHHHHHHHhCCcceEEEcCCCcc--CCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 999999999999999999999997654 346899999999998 689999999999999998754
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-77 Score=627.67 Aligned_cols=390 Identities=19% Similarity=0.204 Sum_probs=339.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhhh-------hHHHHHHHH
Q 009919 13 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASL-------GEIMTTCEK 81 (522)
Q Consensus 13 ~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~----~ea~~-------~Ei~~~~~~ 81 (522)
+++++++++|++||..|+++|.++|.++|+++++.|++++++|++++++|+||+. .++.. .|+..+++.
T Consensus 14 ~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~~ 93 (427)
T 1o20_A 14 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKA 93 (427)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999999999999885 55532 589999999
Q ss_pred HHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHH
Q 009919 82 ITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFY 161 (522)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l 161 (522)
++++++..+. .. ...+......+...+++++|+|||++|+||| +.+.++++++||++||+||+|||+.+|.++..+
T Consensus 94 l~~~a~~~~~-~g-~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l 169 (427)
T 1o20_A 94 CETVIGLKDP-VG-EVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAI 169 (427)
T ss_dssp HHHHHHSCCC-TT-CEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHH
T ss_pred HHHHHhcccc-cC-ccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHH
Confidence 9999876553 11 1111000011234688999999999999986 468999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcEeeecC-cch-hhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 162 FRIIQAALAAVGAPENLVDVITG-FAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 162 ~~~~~~~l~~ag~p~g~v~vv~g-~~~-~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
++++.++|.++|+|+|++|+|+| +.+ .++.|.. ++|+|+||||+.+|+.|++.+ +||+++|||||||+||++|
T Consensus 170 ~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~d 246 (427)
T 1o20_A 170 VSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDES 246 (427)
T ss_dssp HHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeCC
Confidence 99999999999999999999998 444 5677775 799999999999999999887 5999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+| .|++++|||||++++|+|+++|++++++++++
T Consensus 247 ADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~---------------------------- 297 (427)
T 1o20_A 247 ADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE---------------------------- 297 (427)
T ss_dssp SCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE----------------------------
T ss_pred CCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe----------------------------
Confidence 9999999999999999999 99999999999999999999999999987642
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+.||.+ ..+ |+ ||| ++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 298 -------~~gg~~------~~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~ 359 (427)
T 1o20_A 298 -------VRGCEK------TRE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENY 359 (427)
T ss_dssp -------EEECHH------HHH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCH
T ss_pred -------eecChh------hhh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCH
Confidence 123321 012 33 885 245789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC----CcchHHHHHhchhceEEEEcc
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG----RFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G----~~~g~~~l~~ft~~k~v~~~~ 458 (522)
++++++++++++|+|+||++... .+.+||||.|.||+| +++|++|+++||+.|+|+...
T Consensus 360 ~~a~~~~~~l~~G~V~iN~~~~~--~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 360 SNAKKFVSEIDAAAVYVNASTRF--TDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHHHHHCCSSEEEESSCGGG--CSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHHHHHhCCccEEEECCCCcc--CCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 99999999999999999987553 346899999999997 467999999999999998754
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-75 Score=615.46 Aligned_cols=382 Identities=17% Similarity=0.199 Sum_probs=330.7
Q ss_pred ecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHH-HHH
Q 009919 7 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKI-TWL 85 (522)
Q Consensus 7 v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l-~~~ 85 (522)
++.++.+++++++++|++||+.|+++|.++|.++|+++++.|.+++++|++++++|+||+..++...|+..+.+.+ +++
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999999999999999999999999999999999998755776666666 333
Q ss_pred HHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHH
Q 009919 86 LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 165 (522)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~ 165 (522)
... +.. ...+. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++
T Consensus 81 ~~~--~~~--g~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~ 153 (452)
T 3my7_A 81 KDE--QTC--GILEE---DDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLV 153 (452)
T ss_dssp TTC--CCS--EEC----------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred hhc--ccc--ccccC---CCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHH
Confidence 221 110 01111 12345688999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHH
Q 009919 166 QAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 242 (522)
Q Consensus 166 ~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~ 242 (522)
.+++.++|+|+|++++|+|.+ +.+++|++ ++|.|+||||+.+ ++++++++||+++|+|||||+||++|||++.
T Consensus 154 ~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~----~~~a~~~~kp~~~e~gG~~p~iV~~dADl~~ 229 (452)
T 3my7_A 154 LDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGM----VKAAYSSGKPAIGVGAGNVPVVIDETADIKR 229 (452)
T ss_dssp HHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHH----HHHHHTSSSCEEECC--CEEEEECTTSCHHH
T ss_pred HHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHH----HHHHHhcCCCEEecCCCCCeEEEeCCCCHHH
Confidence 999999999999999999954 78999987 8999999999985 4567788999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCC
Q 009919 243 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA 322 (522)
Q Consensus 243 aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga 322 (522)
|++.|++|+|+|+||.|+++++||||+++||+|+++|+++ +||++++++++++.++++++...|+
T Consensus 230 Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a 294 (452)
T 3my7_A 230 AVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNA 294 (452)
T ss_dssp HHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECG
T ss_pred HHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCC
Confidence 9999999999999999999999999999999999999874 3899999999999999987655677
Q ss_pred cEeeccCCCCCCCCCCCcccccEE-------EecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCC----CCceeE
Q 009919 323 EILARGSFGHLSEGAVDQYFPPTV-------IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR----YGLGCA 391 (522)
Q Consensus 323 ~v~~gG~~~~~~~~~~~~~~~Ptv-------l~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gL~a~ 391 (522)
++ .||..... ....|+|++||+ +.++++++++++ |+||||++|++|+|+||||+++|++. |||++|
T Consensus 295 ~v-~G~~~~~~-~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~ 371 (452)
T 3my7_A 295 KI-VGQPATAI-AEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSG 371 (452)
T ss_dssp GG-TTCCHHHH-HHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEE
T ss_pred eE-ecCccchh-HHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEE
Confidence 76 46642100 012589999997 667889999876 89999999999999999999999985 999999
Q ss_pred EecCcHHHHHH---HHHHhccCCeeecCC
Q 009919 392 VFSGSQHRARE---IAAQIQCGVAAINDF 417 (522)
Q Consensus 392 v~s~d~~~~~~---~~~~l~~G~v~IN~~ 417 (522)
|||+|.+.+++ +++++++|+|+||++
T Consensus 372 i~t~d~~~a~~i~~~a~~l~~G~V~VN~~ 400 (452)
T 3my7_A 372 LYTNQDVNADRIRYFGDKMKTARILINIP 400 (452)
T ss_dssp EESCTTTCHHHHHHHHHHCCCSEEEESCC
T ss_pred EEcCCHHHHHHHHHHHHhCCEEEEEECCC
Confidence 99999877666 999999999999985
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.31 Score=49.08 Aligned_cols=258 Identities=17% Similarity=0.195 Sum_probs=143.7
Q ss_pred cccceEEEeeceEEEEEccCc---hhhhhhhHHHHHHhhcCCE--EEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEe
Q 009919 106 HKKAKVEFHPLGVVGAIVSWN---YPFHNIFNPMLAAVFSGNG--IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180 (522)
Q Consensus 106 ~~~~~~~~~P~GVv~vi~p~N---~P~~~~~~~~~~ALaaGN~--VvlKps~~~~~~~~~l~~~~~~~l~~ag~p~g~v~ 180 (522)
|.....++.|+--|++..|.- ||- +.+...+||-.||.. |+.-|.+........++ +.+.+|..+ ++.
T Consensus 120 G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~-----AA~l~Gv~e-Iy~ 192 (423)
T 4gic_A 120 GTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPAPRGELNALVLA-----AAYISGVDR-VFR 192 (423)
T ss_dssp SCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHH-----HHHHHTCCE-EEC
T ss_pred CCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCCCCCCccHHHHH-----HHHhcCCcE-EEE
Confidence 455667889999999999954 553 466778999999986 33344432111111111 223467755 222
Q ss_pred eecCcchhhhhHhc------CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEE--cCCCCHHHHHHHHHHHHH
Q 009919 181 VITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV--CDDVDVPHVAQIAVRAAL 252 (522)
Q Consensus 181 vv~g~~~~~~~L~~------~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV--~~daDl~~aa~~i~~~~~ 252 (522)
+ |+.+...+|.- ++|+|+=.|..=+..+ +.......-+=+. .|.+=+.| |+++|.+..|..++..+=
T Consensus 193 -v-GGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v~g~VgIDm~-AGPSEilViAD~~a~p~~vAaDLlsQAE 267 (423)
T 4gic_A 193 -I-GGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLVFGQVGIDMV-AGPSEILVISDGRTDPDWIAMDLFSQAE 267 (423)
T ss_dssp -C-CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHBTTBEECCC-CCCCEEEEEECSCSCHHHHHHHHHHHHT
T ss_pred -c-CChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHhcCCcCcccc-cccceEEEEeCCCCCHHHHHHHHHHhhc
Confidence 2 55565555532 8999998887755332 1111111111122 34443333 445999998888876655
Q ss_pred HcCCCCcccCCeeEEch--hhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCC
Q 009919 253 QSSGQNCAGAERFYVHR--DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 330 (522)
Q Consensus 253 ~n~Gq~C~a~~~v~V~~--~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~ 330 (522)
+.. .+ +.++|.. +..++..+.+.+.++.+. . .+.+.+.++. .|
T Consensus 268 Hd~----~a-~~iLvT~s~~la~~V~~~i~~~l~~l~---------------r---~~i~~~sl~~---~g--------- 312 (423)
T 4gic_A 268 HDE----DA-QAILISPDAAHLEAVQASIERLLPGME---------------R---AEVIRTSLER---RG--------- 312 (423)
T ss_dssp TCT----TC-EEEEEESCHHHHHHHHHHHHHHGGGCT---------------T---HHHHHHHHHH---HC---------
T ss_pred cCC----CC-eEEEEeCcHHHHHHHHHHHHHHHhhCc---------------c---HHHHHHHHhc---Cc---------
Confidence 433 23 3344433 455555555555555442 1 1112222211 11
Q ss_pred CCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhc-c
Q 009919 331 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-C 409 (522)
Q Consensus 331 ~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~-~ 409 (522)
.++.++|++||++++|..- +=-.-|.++|.. .++.+++ +
T Consensus 313 ------------------------------------~ii~v~~~~ea~~~~N~~A-PEHLel~~~~~~---~~l~~i~nA 352 (423)
T 4gic_A 313 ------------------------------------GMILVDDLEQAAAVANRIA-PEHLELSVESPE---VLVESIRNA 352 (423)
T ss_dssp ------------------------------------EEEECSSHHHHHHHHHHHC-CSEEEEESSCHH---HHGGGCCCC
T ss_pred ------------------------------------eEEEEeehHHHHHHHHhhC-hHHhhhhhCCHH---HHHhhCcEe
Confidence 3455789999999999842 235678888864 4667775 9
Q ss_pred CCeeecCCcc-------cCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 410 GVAAINDFAS-------NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 410 G~v~IN~~~~-------~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
|.|++..+.. ...++-+|- +|..|+.+.-+.+.|...-++.
T Consensus 353 GaIFlG~~tp~~~GDY~aG~NHvLPT-----~G~Ar~~sgLsv~~F~K~~s~~ 400 (423)
T 4gic_A 353 GAIFMGRYTAEALGDYCAGPNHVLPT-----SGTARFSSPLGVYDFQKRSSLI 400 (423)
T ss_dssp SEEEEC----------------CCCC-----TTGGGTCCCCCGGGGEEEEEEE
T ss_pred ceeecCCCCchhhhhcCcCCCccCCC-----CCcccccCCCCHHHeeeeeeEE
Confidence 9999987521 112345665 4566666666778888665553
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=96.61 E-value=0.39 Score=48.50 Aligned_cols=257 Identities=16% Similarity=0.144 Sum_probs=147.7
Q ss_pred cccceEEEeeceEEEEEccC---chhhhhhhHHHHHHhhcCCEEEE--ecCCCchHHHHHHHHHHHHHHHhcCCCCCcEe
Q 009919 106 HKKAKVEFHPLGVVGAIVSW---NYPFHNIFNPMLAAVFSGNGIVI--KVSENASWSGCFYFRIIQAALAAVGAPENLVD 180 (522)
Q Consensus 106 ~~~~~~~~~P~GVv~vi~p~---N~P~~~~~~~~~~ALaaGN~Vvl--Kps~~~~~~~~~l~~~~~~~l~~ag~p~g~v~ 180 (522)
|.....++.|+--|++..|. -||- +.+...+||-.+|..=|+ -|....|.+ ++ +.+.+|..+ ++.
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypS-svLM~aiPAkVAGV~~Iv~~tPp~i~p~i---L~-----AA~l~Gv~e-Iy~ 183 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPPIADEI---LY-----AAQLCGVQD-VFN 183 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTH-HHHHHHHHHHHHTCSEEEEEECSSCCHHH---HH-----HHHHTTCCE-EEE
T ss_pred CcEEEEEEeehheEEEEecCCCCCchh-HHHHhhccHhhcCCCeEEEECCCCCCHHH---HH-----HHHHcCCCE-Eee
Confidence 44556778899999999996 3553 466778999999985444 444233332 11 123467755 222
Q ss_pred eecCcchhhhhHhc------CccEEEEeCCHHHHHHHHHHHhcCCCceeee-CCCcceEEE--cCCCCHHHHHHHHHHHH
Q 009919 181 VITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE-LGGKDAFIV--CDDVDVPHVAQIAVRAA 251 (522)
Q Consensus 181 vv~g~~~~~~~L~~------~vd~V~ftGS~~~g~~v~~~aa~~~~pv~le-lgGk~p~iV--~~daDl~~aa~~i~~~~ 251 (522)
+ |+.+...+|.- ++|+|+=.|..=+..+=..-..... .|-.. ..|.+=+.| |++||.+..|..++..+
T Consensus 184 -v-GGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~G-~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQA 260 (434)
T 1kae_A 184 -V-GGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLD-GAAIDMPAGPSEVLVIADSGATPDFVASDLLSQA 260 (434)
T ss_dssp -C-CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCTT-SCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHH
T ss_pred -c-ccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhcC-ccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHh
Confidence 2 55565555532 8999987777654321111100011 12111 134443333 45699999888887665
Q ss_pred HHcCCCCcccCCeeEEc-hhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCC
Q 009919 252 LQSSGQNCAGAERFYVH-RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 330 (522)
Q Consensus 252 ~~n~Gq~C~a~~~v~V~-~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~ 330 (522)
=+.. .+...++.+ ++..++..+.+.+.+..+. . . +.++.+.
T Consensus 261 EHd~----~a~aiLvT~s~~la~~V~~ev~~ql~~lp---------------r---~----~ia~~sl------------ 302 (434)
T 1kae_A 261 EHGP----DSQVILLTPAADMARRVAEAVERQLAELP---------------R---A----ETARQAL------------ 302 (434)
T ss_dssp TTCT----TCEEEEEESCHHHHHHHHHHHHHHHTTCT---------------T---H----HHHHHHH------------
T ss_pred ccCC----CCcEEEEECCHHHHHHHHHHHHHHHHhCC---------------h---H----HHHHHHH------------
Confidence 4433 333333333 3445555555555444431 0 1 1112111
Q ss_pred CCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhc-c
Q 009919 331 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-C 409 (522)
Q Consensus 331 ~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~-~ 409 (522)
..- .|+-++|++||++++|..- +=-.-|.++|.. .++.+++ +
T Consensus 303 --------------------------------~~~-~ii~v~~l~ea~~~~N~~A-PEHLel~~~dp~---~~l~~I~nA 345 (434)
T 1kae_A 303 --------------------------------NAS-RLIVTKDLAQCVEISNQYG-PEHLIIQTRNAR---ELVDSITSA 345 (434)
T ss_dssp --------------------------------TTC-EEEECSSHHHHHHHHHHHC-CSEEEEESTTHH---HHGGGCCSC
T ss_pred --------------------------------HcC-eEEEECCHHHHHHHHHHhh-hHhhhhhhcCHH---HHHhhcCcc
Confidence 111 4556789999999999852 235778888874 4666775 8
Q ss_pred CCeeecCCcc-------cCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 410 GVAAINDFAS-------NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 410 G~v~IN~~~~-------~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
|.|++..+.. ...++-||-+ |..|+.+.-+.+.|...-++.
T Consensus 346 GaIFlG~~tpe~~GDY~aG~NHvLPT~-----G~AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 346 GSVFLGDWSPESAGDYASGTNHVLPTY-----GYTATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp SEEEESTTCCHHHHHHTSSSCCCCCCT-----TGGGTCCCSCGGGGEEEEEEE
T ss_pred cchhcCCCCchhhcccccCCCcccCCC-----CceeccCCCcHHhccceeeEE
Confidence 9999997521 2335667765 556666666778888766554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 522 | ||||
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-106 | |
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-105 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-104 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 4e-93 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 5e-90 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-79 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 2e-77 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 6e-69 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 5e-39 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-33 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 1e-22 |
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 325 bits (834), Expect = e-106
Identities = 134/456 (29%), Positives = 212/456 (46%), Gaps = 15/456 (3%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
L EVD+ V A+ A W+K + +R + + + I E ++ I ++ +
Sbjct: 49 LCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINN 108
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 123
GKT+ E + + + A PLGV I+
Sbjct: 109 GKTI-----TEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGIL 163
Query: 124 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 183
+WNYPF A+ GN +V K S +G I A G P LV+V+
Sbjct: 164 AWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEA----GVPVGLVNVVQ 219
Query: 184 GFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVP 241
G AETG L V K+ F GS G+ +M ++KT+ VTLELGGK ++ D ++
Sbjct: 220 GGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELE 279
Query: 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 301
+ + A+ A + GQ C R +V R+I F+ +V K K++ G PL + MG L
Sbjct: 280 NAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGL 339
Query: 302 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQE 359
+K+ V A +GA +L G S+ + + P V+ N M ++E
Sbjct: 340 ISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKE 399
Query: 360 EAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFAS 419
E FGP+M ++ F+T+EEV++ AN++ +GL VF+ RA +AA ++ G IN ++
Sbjct: 400 EIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSI 459
Query: 420 NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
+ + +PFGG K SGFGR G + +K+V+
Sbjct: 460 SPV--EVPFGGYKMSGFGRENGQATVDYYSQLKTVI 493
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 322 bits (827), Expect = e-105
Identities = 129/459 (28%), Positives = 210/459 (45%), Gaps = 21/459 (4%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQELICEISS 60
L + +VD+ V AR+A ++ W +R + L L I + L+ + +
Sbjct: 42 LCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEA 101
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
+ GK +A L ++ + + + +K G + P+GV G
Sbjct: 102 MNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTY----TRSEPVGVCG 157
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
I+ WN+P + A+ GN +V+K +E + +I+ A G P +V+
Sbjct: 158 QIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEA----GFPPGVVN 213
Query: 181 VITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASK-TLTPVTLELGGKDAFIVCD 236
++ G+ G A+ S VDK+ F GS VG++I A K L V+LELGGK IV
Sbjct: 214 IVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFA 273
Query: 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 296
D D+ + + A + GQ C A R +V IY FV + + K G PL
Sbjct: 274 DADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGV 333
Query: 297 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 356
G E EK+ +L+ +GA++ G ++G + PTV +V M++
Sbjct: 334 SQGPQIDKEQYEKILDLIESGKKEGAKLECGGG-PWGNKGY---FIQPTVFSDVTDDMRI 389
Query: 357 MQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 416
+EE FGP+ IMKF + ++V+K AN++ YGL +F+ +A +++ +Q G +N
Sbjct: 390 AKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNC 449
Query: 417 FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
+ + + PFGG K SG GR G G VK+V
Sbjct: 450 Y--SVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVT 486
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 320 bits (820), Expect = e-104
Identities = 138/459 (30%), Positives = 210/459 (45%), Gaps = 21/459 (4%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQELICEISS 60
+ + +VD+ V AR A ++ W + R + L L I + + + +
Sbjct: 42 ICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALET 101
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
D GK V + L ++ + + + +K+ G + P+GV G
Sbjct: 102 LDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSY----TRHEPVGVCG 157
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
I+ WN+P + A+ +GN +V+KV+E + + +I+ A G P +V+
Sbjct: 158 QIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GFPPGVVN 213
Query: 181 VITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKDAFIVCD 236
++ GF G A+ S VDK+ F GS +GR+I A S L VTLELGGK I+
Sbjct: 214 IVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMS 273
Query: 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 296
D D+ + A A + GQ R +V DIY FV + KS G P K
Sbjct: 274 DADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT 333
Query: 297 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 356
+ G +K+ +N +GA++L G G + PTV +V M +
Sbjct: 334 EQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI-AADRGY---FIQPTVFGDVQDGMTI 389
Query: 357 MQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 416
+EE FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +Q G +N
Sbjct: 390 AKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNC 449
Query: 417 FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
+ + PFGG K SG GR G GL+A VK+V
Sbjct: 450 Y--DVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 486
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 289 bits (741), Expect = 4e-93
Identities = 120/455 (26%), Positives = 205/455 (45%), Gaps = 16/455 (3%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
L S +VD V A A W +++ K R + L L I E+ ++ E+ SR+
Sbjct: 30 LLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNC 89
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 123
GK + A EI + + ++G + + + PLGVV +I
Sbjct: 90 GKPLHSAFNDEIPAIVDVFRF---FAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIA 146
Query: 124 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 183
WNYP + A+ +GN +V+K SE + + + P +V+++
Sbjct: 147 PWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIF-----PAGVVNILF 201
Query: 184 GF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
G G+ L V + GS G I+ + + ++ +ELGGK IV DD D+
Sbjct: 202 GRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADI 261
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
V + ++GQ+C A R Y + IY V ++ V ++ +G P ++G
Sbjct: 262 EAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGP 321
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
L L H E++ V +A G + G G Y+ PT++ ++Q+E
Sbjct: 322 LSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGY---YYAPTLLAGALQDDAIVQKE 378
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
FGP++ + F+ +E+VV ANDS+YGL +V++ RA ++A++Q G +N
Sbjct: 379 VFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTH--F 436
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
+ +P GG K SG+G+ + GL +V+ V+
Sbjct: 437 MLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 471
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 281 bits (718), Expect = 5e-90
Identities = 124/460 (26%), Positives = 198/460 (43%), Gaps = 19/460 (4%)
Query: 15 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 74
+ + V +AR+A S + R Q L L + I E+ + I + D GK + E
Sbjct: 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEE 61
Query: 75 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 134
+ E++ + E W + E + R + PLGVV I +WNYPF+
Sbjct: 62 VAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQ 121
Query: 135 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS 194
PM+ AV +GN +++K SE + +I + V G ET E L
Sbjct: 122 PMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ----YMDQNLYLVVKGGVPETTELLKE 177
Query: 195 SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 254
D I++ GS VG+++M A+K LTPVTLELGGK V D D+ + +
Sbjct: 178 RFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMN 237
Query: 255 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314
SGQ C + I V ++ K +K G D G + H ++++ L+
Sbjct: 238 SGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLI 296
Query: 315 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 374
++ + S Y PT++V+V+ +MQEE FGP+MPI+ +
Sbjct: 297 DNQKVAHGGTWDQSSR----------YIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSL 346
Query: 375 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDS 434
EE ++ N L VFS ++ +++ A+ G ND + +LPFGGV +S
Sbjct: 347 EEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNS 406
Query: 435 GFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYP 474
G G + G + +S + + +YP
Sbjct: 407 GMGAYHGKKSFETFSHRRSCLVKSLLN----EEAHKARYP 442
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 253 bits (647), Expect = 3e-79
Identities = 133/458 (29%), Positives = 201/458 (43%), Gaps = 19/458 (4%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
LG PA+S EVD A A+KAQ W S+ +R +L + ++ +E I I S++
Sbjct: 30 LGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEV 89
Query: 64 GKTMVDASLGEIMTT-CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAI 122
K A + T + E S + K A V P+G+V AI
Sbjct: 90 AKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAI 149
Query: 123 VSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI 182
+NYP + + + A+ +GN I K S SG A G P + + I
Sbjct: 150 SPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEA----GLPAGVFNTI 205
Query: 183 TGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVD 239
TG +E G+ +V V+ I F GS G+G I + A + P+ LELGGKD+ IV +D D
Sbjct: 206 TGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDAD 263
Query: 240 VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMG 299
+ A+ + A SGQ C +R V + V ++ + V +++ G P
Sbjct: 264 LELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITP 323
Query: 300 ALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQE 359
K + V ++ + A EG P + V M+L E
Sbjct: 324 -----LIDTKSADYVEGLINDANDKGATALTEIKREGN---LICPILFDKVTTDMRLAWE 375
Query: 360 EAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFAS 419
E FGP++PI++ + EE ++++N S YGL ++F+ RA IA Q++ G IN+
Sbjct: 376 EPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQ 435
Query: 420 NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457
+ PF G K SG G + A VKSVV D
Sbjct: 436 -RGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 472
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 250 bits (638), Expect = 2e-77
Identities = 114/467 (24%), Positives = 184/467 (39%), Gaps = 26/467 (5%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+G +AE + + A KA K W + R + L + + + +
Sbjct: 65 VGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEV 124
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL-GVVGAI 122
GK V+ E I ++ L+ Y + + F+ G I
Sbjct: 125 GKNWVE----ASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVI 180
Query: 123 VSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI 182
WN+P ++ V GN ++ K +E+A G F I A G P +V+ +
Sbjct: 181 APWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA----GFPPGVVNFL 236
Query: 183 TGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNA------SKTLTPVTLELGGKDAFI 233
G E G LV + I F GS VG I A +E GGK+A I
Sbjct: 237 PGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAII 296
Query: 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 293
V + D A+ V +A GQ C+ A R + + Y + +V K + +S GP
Sbjct: 297 VDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEE 356
Query: 294 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT 353
D+G + E K+ + + ++G +L EG + PTV V
Sbjct: 357 NP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLE--GEGY---FIAPTVFTEVPPK 410
Query: 354 MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 413
++ QEE FGP++ +++ E +++AND+ YGL V+S + + G
Sbjct: 411 ARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLY 470
Query: 414 INDFASNYMCQSLPFGGVKDSGFGRFAG-VEGLRACCLVKSVVEDRW 459
N + + PFGG K SG G ++ LR +K+V E R+
Sbjct: 471 FNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE-RF 516
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 227 bits (579), Expect = 6e-69
Identities = 108/466 (23%), Positives = 179/466 (38%), Gaps = 17/466 (3%)
Query: 4 LGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRD 62
+ + SR EV+ + K + +R LR I + ++ E+ +
Sbjct: 43 IAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMN 102
Query: 63 TGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAI 122
GK A L + + + V PLGVV AI
Sbjct: 103 AGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAI 162
Query: 123 VSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI 182
+NYP + N + + GN +V+K S + + + A G P + + ++
Sbjct: 163 TPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDA----GFPPDAIALL 218
Query: 183 TGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
+ E +V+ V + F GS VG +++ + +ELGG D IV +D D+
Sbjct: 219 NLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLEDADL 276
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
A R +GQ C + R +Y V +VAK + S+ G P D+G
Sbjct: 277 DLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGP 336
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
L +++ + DA++KG +LA G + Q + M L + E
Sbjct: 337 LISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYV---QPTLVEAPADRVKDMVLYKRE 393
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
F P+ ++ ++ ++LAN YGL AVF + R ++ G IND +
Sbjct: 394 VFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRH 453
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED----RWWPY 462
+ PFGG K SG R + A K++V + W Y
Sbjct: 454 GIGY-YPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYKGKGVWKY 498
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 145 bits (365), Expect = 5e-39
Identities = 67/453 (14%), Positives = 144/453 (31%), Gaps = 59/453 (13%)
Query: 14 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKT----MVD 69
E+ E+ + R+A V ++ +++ + ++ + + + E ++ I E + D K + +
Sbjct: 2 ELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKE 61
Query: 70 ASLGEIMTTCEKITWLLSEGEKWL---KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 126
+ + + ++I ++ E + P + ++ + + + +
Sbjct: 62 SLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYE 121
Query: 127 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 186
+ + A+ SGN I+++ +A S I+ AL PE+ V+ I
Sbjct: 122 SRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTD 181
Query: 187 ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 246
+ + + + + + P G ++ T LE G + I D+ A
Sbjct: 182 RSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVP 241
Query: 247 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 306
+ A C AE+ VH I F+ + + ++
Sbjct: 242 VIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVR--------------- 286
Query: 307 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 366
+ V V T E I+
Sbjct: 287 -------------------------------GCEKTREIVPDVVPATEDDWPTEYLDLII 315
Query: 367 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 426
I +E ++ G ++ + + A++ ++I +N AS
Sbjct: 316 AIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVN--ASTRFTDGG 373
Query: 427 PFGGVKDSGFGRF----AGVEGLRACCLVKSVV 455
FG + G G GLR K VV
Sbjct: 374 QFGFGAEIGISTQRFHARGPVGLRELTTYKFVV 406
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 131 bits (330), Expect = 1e-33
Identities = 53/454 (11%), Positives = 112/454 (24%), Gaps = 20/454 (4%)
Query: 7 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKT 66
FP + EV++ A K + + + + +R LR + + + I + +T
Sbjct: 20 FPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALP 79
Query: 67 MVDASLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGA 121
V + GEI T ++ + + + + + + LG V
Sbjct: 80 EVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAV 138
Query: 122 IVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 181
+ N+P A G + V + + G A
Sbjct: 139 FGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIF 198
Query: 182 ITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVP 241
+ V G + A L E + +
Sbjct: 199 TLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFI 258
Query: 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 301
+ + +A L +F + + L + L
Sbjct: 259 FPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTL 318
Query: 302 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 361
+ Q+ V + +EE
Sbjct: 319 LTPGIRDSYQSQVVSRGSDDGIDVTFSQAES----PCVASALFVTSSENWRKHPAWEEEI 374
Query: 362 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ--HRAREIAAQIQ--CGVAAINDF 417
FGP I+ +++ L+ L + + + + ++ +++ G N +
Sbjct: 375 FGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGW 434
Query: 418 -----ASNYMCQSLPFGGVKDSGFGRFAGVEGLR 446
M P+ S G E +
Sbjct: 435 PTGVEVGYAMVHGGPYPASTHSASTSV-GAEAIH 467
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 98.4 bits (244), Expect = 1e-22
Identities = 52/429 (12%), Positives = 122/429 (28%), Gaps = 47/429 (10%)
Query: 13 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRD----TGKTMV 68
+ + ARKA + S + R L + + + I E + D +
Sbjct: 3 SSSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLA 62
Query: 69 DASLGEI-MTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 124
D+ L + + +K +L + + P + + + V +V
Sbjct: 63 DSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI 122
Query: 125 WNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG----CFYFRIIQAALAAVGAPENLVD 180
+ I N ++ SGN ++K + + + I + G P V
Sbjct: 123 FESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQ 182
Query: 181 VITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240
+I + + L + V + + PV G + + +D D+
Sbjct: 183 LIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK-IPVLGHADGICSIYLDEDADL 241
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
+I++ A E ++ + + +
Sbjct: 242 IKAKRISLDAKTNYPAGCN-AMETLLINPKFSKWW---------------EVLENLTLEG 285
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
+ ++ L+ D L++ ++ + TV + + +E
Sbjct: 286 GVTIHATKDLKTAYFDKLNELGKL-------------TEAIQCKTVDAD---EEQDFDKE 329
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
+ + E ++ N A+ + ++ A + + N AS
Sbjct: 330 FLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWN--AST 387
Query: 421 YMCQSLPFG 429
+G
Sbjct: 388 RFADGFRYG 396
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 522 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 97.48 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=1.9e-95 Score=776.21 Aligned_cols=444 Identities=29% Similarity=0.463 Sum_probs=414.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH---HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMT 77 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~---~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~ 77 (522)
||++++++.++.+|++.++++|++||+ .|+++|.++|.++|++++++|++++++|++++++|+||+..++...|+..
T Consensus 39 ~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~~L~~~~eela~l~~~E~Gk~~~e~~~~ev~~ 118 (494)
T d1bxsa_ 39 EEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGG 118 (494)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCchhhhhhhhhhh
Confidence 689999999999999999999999985 79999999999999999999999999999999999999999876678999
Q ss_pred HHHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHH
Q 009919 78 TCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 157 (522)
Q Consensus 78 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~ 157 (522)
.++.+++++...+++.. +..+.. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 119 ~~~~~~~~a~~~~~~~~-~~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKpse~tp~~ 194 (494)
T d1bxsa_ 119 CIKTLRYCAGWADKIQG-RTIPMD---GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLT 194 (494)
T ss_dssp HHHHHHHHHHHGGGCCE-EEECCS---SSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHH
T ss_pred hhHHHHHHhhhhhhhcc-eeecCC---CCceeEEEEccEEEEEEEeCccchhHHHHHHHHHHHHcCCeEEEECCCCChHH
Confidence 99999999887766432 222221 34567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhc-CCCceeeeCCCcceEE
Q 009919 158 GCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK-TLTPVTLELGGKDAFI 233 (522)
Q Consensus 158 ~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~-~~~pv~lelgGk~p~i 233 (522)
+.++.+++. ++|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+.|++.+++ ++||+++|||||||+|
T Consensus 195 a~~l~~~~~----~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~i~~~aa~~~~~~~~lElGG~np~i 270 (494)
T d1bxsa_ 195 ALHMGSLIK----EAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCI 270 (494)
T ss_dssp HHHHHHHHH----HHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEE
T ss_pred HHHHHHHHH----HhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHHHHHHhcccCCCeEEEEcCCcCcEE
Confidence 999888776 6799999999999975 57888987 89999999999999999999885 6999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHH
Q 009919 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 313 (522)
Q Consensus 234 V~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~ 313 (522)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++
T Consensus 271 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~ 350 (494)
T d1bxsa_ 271 VFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDL 350 (494)
T ss_dssp ECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred ECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhheeeeccCCCCCcCCCcCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEe
Q 009919 314 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 393 (522)
Q Consensus 314 i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~ 393 (522)
|++|+++|+++++||... ...|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 351 i~~a~~~Ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~~eai~~~n~~~~gL~a~i~ 426 (494)
T d1bxsa_ 351 IESGKKEGAKLECGGGPW----GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIF 426 (494)
T ss_dssp HHHHHHTTCEECSCCSEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEE
T ss_pred HHHHHHcCCEEEeCCCcc----CCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCHHHHHHHHhCCCCCCeEEEE
Confidence 999999999999999743 3578999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 394 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 394 s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
|+|.+.++++++++++|+|+||++... .+.+||||+|.||+|++||.+||++||+.|+|+.+.
T Consensus 427 t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~i~~~~ 489 (494)
T d1bxsa_ 427 TNDIDKAITVSSALQSGTVWVNCYSVV--SAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 489 (494)
T ss_dssp CSBHHHHHHHHHHSCCSEEEESCCCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred eCCHHHHHHHHHhCCEeEEEEcCCCCc--CCCCCcCccccccCChhhHHHHHHHhcceEEEEEec
Confidence 999999999999999999999987554 346999999999999999999999999999998753
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=8e-95 Score=771.53 Aligned_cols=448 Identities=30% Similarity=0.463 Sum_probs=420.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+|+++++++|++||+.|++++..+|.++|+++++.|++++++|+++++.|+||+..++. .|+...++
T Consensus 46 ge~i~~v~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~~a~~L~~~~eela~~~~~etGkp~~ea~-~ev~~~~~ 124 (503)
T d1a4sa_ 46 GRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAWQ 124 (503)
T ss_dssp CCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhhhcchhhh-hhhhhhhh
Confidence 78999999999999999999999999999999999999999999999999999999999999999999985 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.+++++....+....... . ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.+
T Consensus 125 ~l~~~a~~~~~~~~~~~~-~---~~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~ 200 (503)
T d1a4sa_ 125 CIEYYAGLAPTLSGQHIQ-L---PGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVI 200 (503)
T ss_dssp HHHHHHHHGGGCCEEEEE-C---GGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHH
T ss_pred cccccccccccccccccc-c---CCCcccccccccceeeecccCCCChHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence 999998887765432221 1 134568899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+++++. ++|+|+|++|+|+|+.+.++.|++ .+|+|+||||+++|+.|++.+++++||+++|||||||+||++||
T Consensus 201 l~~~~~----~aglP~gv~~~v~g~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGG~~p~iV~~dA 276 (503)
T d1a4sa_ 201 LAEIFH----EAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDC 276 (503)
T ss_dssp HHHHHH----HTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTS
T ss_pred HHHHHH----HhCcCCCeEEEecCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCcEEEECCCcCcEEECCCc
Confidence 888766 689999999999998899999998 89999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.+++++|.|+||.|++++|+|||++++|+|++++.+.++++++|+|.+..+++||++++.+++++.+++++++
T Consensus 277 dl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~ 356 (503)
T d1a4sa_ 277 ELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAK 356 (503)
T ss_dssp CHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHH
T ss_pred cHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeeccccccccccccccCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCC--CCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 319 DKGAEILARGSFGHL--SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~--~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
++|+++++||..... +....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 357 ~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~an~~~~gL~~~i~t~d 436 (503)
T d1a4sa_ 357 KEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRD 436 (503)
T ss_dssp HHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSB
T ss_pred HcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCC
Confidence 999999999975432 223578999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEccc
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 459 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~ 459 (522)
.+.++++++++++|+|+||++..+. +.+||||+|.||+|++||.+|+++||+.|+|+++..
T Consensus 437 ~~~~~~~~~~l~~G~v~iN~~~~~~--~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~ 497 (503)
T d1a4sa_ 437 ISRAHRVAANLEAGTCYINTYSISP--VEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMG 497 (503)
T ss_dssp HHHHHHHHHHSCSSEEEESCCCCCC--TTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECCS
T ss_pred HHHHHHHHHhCCeeEEEEeCCCCCC--CCCCccCcccCcCCcchHHHHHHHhhCeEEEEEcCC
Confidence 9999999999999999999976643 469999999999999999999999999999988653
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=7.6e-95 Score=771.06 Aligned_cols=443 Identities=30% Similarity=0.463 Sum_probs=413.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH---HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMT 77 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~---~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~ 77 (522)
||++++++.++.+|+++++++|++||+ .|++++.++|.++|+++++.|++++++|++++++|+||+..++...|+..
T Consensus 39 g~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l~~~~eela~~~~~E~GK~~~ea~~~ev~~ 118 (494)
T d1o04a_ 39 GEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDM 118 (494)
T ss_dssp TEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcchhhhhhhHHHH
Confidence 689999999999999999999999985 69999999999999999999999999999999999999999987789999
Q ss_pred HHHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHH
Q 009919 78 TCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 157 (522)
Q Consensus 78 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~ 157 (522)
.++.+++++....++.. +..+.. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 119 ~~~~~~~~a~~~~~~~~-~~~~~~---~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~ 194 (494)
T d1o04a_ 119 VLKCLRYYAGWADKYHG-KTIPID---GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLT 194 (494)
T ss_dssp HHHHHHHHHHHTTTCCE-EEECCS---SSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHH
T ss_pred HHHHHHHHHHHHHHhcC-ceeccC---CCceeEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCeEEEeCCCCCcHH
Confidence 99999999988776532 222221 24567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHh-cCCCceeeeCCCcceEE
Q 009919 158 GCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELGGKDAFI 233 (522)
Q Consensus 158 ~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa-~~~~pv~lelgGk~p~i 233 (522)
+.++.+++. ++|+|+|++|+|+|++ +.++.|+. .+|.|+||||+++|+.|++.++ +++||+++|||||||+|
T Consensus 195 ~~~l~~l~~----~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~~~~lElGG~~p~i 270 (494)
T d1o04a_ 195 ALYVANLIK----EAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNI 270 (494)
T ss_dssp HHHHHHHHH----HHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEE
T ss_pred HHHHHHHHH----HhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHHHHhhccCCCeEEEECCCcCcEE
Confidence 998888765 6799999999999975 67899987 8999999999999999998875 78999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHH
Q 009919 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 313 (522)
Q Consensus 234 V~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~ 313 (522)
|++|||++.|++.+++++|.|+||.|+++++||||++++|+|++.|+++++.+++|+|.++++++|||+++.+++++.++
T Consensus 271 V~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~ 350 (494)
T d1o04a_ 271 IMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGY 350 (494)
T ss_dssp ECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHH
T ss_pred EccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheeecCcccccCccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEe
Q 009919 314 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 393 (522)
Q Consensus 314 i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~ 393 (522)
|++++++|+++++||... .+.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 351 i~~a~~~Ga~vl~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~i~ 426 (494)
T d1o04a_ 351 INTGKQEGAKLLCGGGIA----ADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 426 (494)
T ss_dssp HHHHHHTTCEEEECCSBC----CSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEE
T ss_pred HHHHHHCCCEEEECCCcC----CCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCCeEEEE
Confidence 999999999999999743 3568999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 394 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 394 s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
|+|.+.++++++++++|+|+||++.... +.+||||+|.||+|++||.+||++||+.|+|+.+
T Consensus 427 s~d~~~~~~~~~~l~~G~v~iN~~~~~~--~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~v~~~ 488 (494)
T d1o04a_ 427 TKDLDKANYLSQALQAGTVWVNCYDVFG--AQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 488 (494)
T ss_dssp CSBHHHHHHHHHHCCSSEEEESCSSCCC--TTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred eCCHHHHHHHHHhCCeeEEEEcCCCCCC--CCCCcCCcccccCCchhHHHHHHHhcCeEEEEEe
Confidence 9999999999999999999999876643 4689999999999999999999999999999763
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.4e-92 Score=757.37 Aligned_cols=443 Identities=25% Similarity=0.381 Sum_probs=409.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|++++++|+||+..++. .|+..+++
T Consensus 62 ge~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 140 (516)
T d1uzba_ 62 SEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAID 140 (516)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CeEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc-hhHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999985 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.+++++..+..+..+.....+ ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~ 218 (516)
T d1uzba_ 141 FIEYYARAALRYRYPAVEVVP--YPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAK 218 (516)
T ss_dssp HHHHHHHHHGGGCSSCCCCCC--CTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHhhhhccccccc--ccccceeEEeeccCccccccccccccccccccccchhhhcccccccccchhHHHHHH
Confidence 999999887766543322221 234566788999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHh------cCCCceeeeCCCcce
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS------KTLTPVTLELGGKDA 231 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa------~~~~pv~lelgGk~p 231 (522)
+.+++. ++|+|+|++|+|+|++ +.++.|++ .+|.|.||||+.+|+.|++.++ .++||+++|||||||
T Consensus 219 l~~~~~----~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~~aa~~~~~~~~~k~v~lElgG~~p 294 (516)
T d1uzba_ 219 VFEIFH----EAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNA 294 (516)
T ss_dssp HHHHHH----HHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEE
T ss_pred HHHHHH----HhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHHHHhhcccchhhhhhheeeccCccc
Confidence 887765 6899999999999975 67899987 8999999999999999999987 678999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHH
Q 009919 232 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 311 (522)
Q Consensus 232 ~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~ 311 (522)
+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|++++.++++++++| |.++++++||+++..+++++.
T Consensus 295 ~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~g-~~~~~~~~gpli~~~~~~~~~ 373 (516)
T d1uzba_ 295 IIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVL 373 (516)
T ss_dssp EEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS-CGGGCCSBCCCSCHHHHHHHH
T ss_pred eeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhcccC-CCcccCccccccCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999 557888999999999999999
Q ss_pred HHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeE
Q 009919 312 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 391 (522)
Q Consensus 312 ~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~ 391 (522)
++|++++++|+.+ +||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 374 ~~i~~a~~~Ga~v-~~g~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~d~eeai~~an~~~~gL~a~ 448 (516)
T d1uzba_ 374 SYIEIGKNEGQLV-LGGKRL----EGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGG 448 (516)
T ss_dssp HHHHHHTTTSEEE-ECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEE
T ss_pred HHHHHHHHCCCEE-ECCCcC----CCCCceECCEEEecCCCCchhhcCCCcCceEEEEEeCCHHHHHHHHHCCCCCCEEE
Confidence 9999999888755 566532 35789999999999999999999999999999999999999999999999999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcch-HHHHHhchhceEEEE
Q 009919 392 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG-VEGLRACCLVKSVVE 456 (522)
Q Consensus 392 v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g-~~~l~~ft~~k~v~~ 456 (522)
|||+|.+.++++++++++|+|+||++.++...+.+||||+|.||+|+++| .+++++||+.|+|..
T Consensus 449 i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~~~k~v~~ 514 (516)
T d1uzba_ 449 VYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE 514 (516)
T ss_dssp EECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEE
T ss_pred EEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccchHHHHHHhCCeeeEEE
Confidence 99999999999999999999999998777666789999999999999976 789999999999985
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.2e-92 Score=749.24 Aligned_cols=444 Identities=27% Similarity=0.438 Sum_probs=405.7
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+||+..++...++.....
T Consensus 27 g~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~~~~~~~~ 106 (474)
T d1wnda_ 27 GDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVD 106 (474)
T ss_dssp TEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCChhHhhhcccccccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999986556666666
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
..+++.......... ..+....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 107 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~a~ALaaGN~Vv~Kps~~~p~~~~~ 183 (474)
T d1wnda_ 107 VFRFFAGAARCLNGL---AAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALK 183 (474)
T ss_dssp HHHHHHHHTTCCEEE---CBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHH
T ss_pred ccccccccccccccc---ccccccCCcceEEEEecccceEEEeecchHhhhhhccHHHHHHhCCCEEEeCCCcCcHHHHH
Confidence 666665544332211 11112234677899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
++++++ .++|+|++|+|+|++ +.++.|++ ++|.|.||||+++|+.|++.+++++||+++|||||||+||++|
T Consensus 184 ~~~l~~-----~~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~~~~k~~~lElgG~~p~iV~~d 258 (474)
T d1wnda_ 184 LAELAK-----DIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDD 258 (474)
T ss_dssp HHHHHT-----TTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTT
T ss_pred HHHHHH-----HhCCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhhcCCCeEEEEcCCCCceEEcCc
Confidence 888764 459999999999975 67899987 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|+++++||||++++|+|++.|++.++++++|++.++++++||+++..+.+++.++++++
T Consensus 259 ad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a 338 (474)
T d1wnda_ 259 ADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEA 338 (474)
T ss_dssp SCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCCceecccccccccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+..+.+|... ....|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 339 ~~~ga~~v~~G~~~---~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~deai~~an~~~~GL~a~i~t~d~ 415 (474)
T d1wnda_ 339 KATGHIKVITGGEK---RKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDV 415 (474)
T ss_dssp HHTSSCEEEECCSB---CSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBH
T ss_pred HHCCCeEEEeCCcc---cCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCH
Confidence 99999655554422 235789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
+++++++.++++|+|+||++... .+.+||||+|+||+|++||.+|+++||+.|+|+++
T Consensus 416 ~~~~~~~~~l~~g~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v~i~ 473 (474)
T d1wnda_ 416 GRAHRVSARLQYGCTWVNTHFML--VSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 473 (474)
T ss_dssp HHHHHHHHHCCSSEEEESCCCCC--CTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHhCCccEEEEeCCCCc--cCCCCcccccccccCccCHHHHHHHcCCEEEEEEe
Confidence 99999999999999999997654 34699999999999999999999999999999864
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.8e-90 Score=726.85 Aligned_cols=443 Identities=28% Similarity=0.438 Sum_probs=406.4
Q ss_pred HHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHccccccC
Q 009919 15 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK 94 (522)
Q Consensus 15 v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~ 94 (522)
|++++++|++||+.|+.+|.++|.++|++++++|++++++|+++++.|+||+..++..+|+..+++.++++++++..|..
T Consensus 2 v~~av~~Ar~Af~~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 81 (446)
T d1ad3a_ 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAE 81 (446)
T ss_dssp HHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 68999999999999999999999999999999999999999999999999999999878999999999999998888776
Q ss_pred cccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcCC
Q 009919 95 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 174 (522)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag~ 174 (522)
+..........+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++.++++++.+ ++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~-----~~ 156 (446)
T d1ad3a_ 82 DEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ-----YM 156 (446)
T ss_dssp CEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHH-----HS
T ss_pred ccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceeccccccccccccc-----cc
Confidence 6554444334456678999999999999999999999999999999999999999999999999988887753 48
Q ss_pred CCCcEeeecCcchhhhhHhc-CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHHHHHHH
Q 009919 175 PENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQ 253 (522)
Q Consensus 175 p~g~v~vv~g~~~~~~~L~~-~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~~~~~~ 253 (522)
|+++++++.|.......+.. .+|.|+||||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.|++++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~ 236 (446)
T d1ad3a_ 157 DQNLYLVVKGGVPETTELLKERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFM 236 (446)
T ss_dssp CTTTEEECCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHT
T ss_pred cccccccccccchhhhhhcccccCceEEECcHHHHHHHHHHHHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHhc
Confidence 99999999988766666767 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCCCCC
Q 009919 254 SSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL 333 (522)
Q Consensus 254 n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~ 333 (522)
|+||.|+++++||||++++|+|+++|.+.++.+ +|++.++++++||++++.+++++.+.+++ ++...|+.
T Consensus 237 ~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~-----a~~~~g~~---- 306 (446)
T d1ad3a_ 237 NSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDN-----QKVAHGGT---- 306 (446)
T ss_dssp TTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTT-----SCEEECCC----
T ss_pred CCCCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccc-----hhccccee----
Confidence 999999999999999999999999999999888 79999999999999999999999887764 34444443
Q ss_pred CCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhccCCee
Q 009919 334 SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 413 (522)
Q Consensus 334 ~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~~G~v~ 413 (522)
.+..+.|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++.++++|+|+
T Consensus 307 -~~~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~ 385 (446)
T d1ad3a_ 307 -WDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVT 385 (446)
T ss_dssp -EETTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEE
T ss_pred -ecCCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEE
Confidence 2456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcccccccccCCCCCCCCCCCc
Q 009919 414 INDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAE 477 (522)
Q Consensus 414 IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~~~~~p~~~ 477 (522)
||++..+...+.+||||+|.||+|++||.+|+++||+.|+|+.++++. ..|..++|||+.
T Consensus 386 iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~~~~----~~~~~~~~pp~~ 445 (446)
T d1ad3a_ 386 ANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVKSLLN----EEAHKARYPPSP 445 (446)
T ss_dssp ESSSSGGGGCTTSCCCCCGGGEECCCSTHHHHHHTEEEEEEEECCCCC----CCTTGGGSSSCC
T ss_pred EeCCccCCCCCCCCccccccceeccchHHHHHHHHhceeEEEEccCCC----CccccccCCCCC
Confidence 999877766778999999999999999999999999999999887652 456678999864
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=3.6e-86 Score=705.76 Aligned_cols=443 Identities=25% Similarity=0.370 Sum_probs=404.6
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH-HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~-~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
||++++++.++.+|++++++.|++|++ +|+++|..+|.++|+++++.|.+++++|+++++.|+||+..++. +|+..++
T Consensus 40 ~~~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~etGk~~~~a~-~Ev~~~i 118 (499)
T d1ky8a_ 40 LATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAV 118 (499)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHh-hhhhccc
Confidence 689999999999999999999988877 79999999999999999999999999999999999999999985 7999999
Q ss_pred HHHHHHHHccccccCcccccC-CcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 80 EKITWLLSEGEKWLKPEYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 80 ~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
+.+++++..++++........ .....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 119 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~ 198 (499)
T d1ky8a_ 119 DRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPA 198 (499)
T ss_dssp HHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHH
T ss_pred ccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccchhhhhcchhhhcccccccccccccchhhh
Confidence 999999988877543322211 1112345678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
..+.+++. ++|+|.++++++.|+++.+..|+. .++.|.||||+.+++.+++.++ .+|+++|||||||+||++
T Consensus 199 ~~l~~~~~----~~~~p~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~i~~~~~--~~~~~lElgG~np~iV~~ 272 (499)
T d1ky8a_ 199 AMAVKALL----DAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLE 272 (499)
T ss_dssp HHHHHHHH----HHTCCTTSEEECCCCGGGGHHHHHCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEECCCCEEEEECT
T ss_pred hhhccccc----cccccceeeecccCChHHHHHHhhccceeEEEeecccccceEEeeccc--ccceEEecCCCCeEEEcC
Confidence 88887766 678999999999998888888887 9999999999999999998775 589999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++++++++++++++
T Consensus 273 dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~ 352 (499)
T d1ky8a_ 273 DADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIED 352 (499)
T ss_dssp TSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHH
T ss_pred CcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCccCCCCCccccccccchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEe---cCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEe
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIV---NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 393 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~---~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~ 393 (522)
|+++|++++.||.. ....++.+++++ ++.+||.+++||+||||++|++|+|.||||+++|+++|||++|||
T Consensus 353 a~~~ga~v~~~~~~------~~~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gLt~sv~ 426 (499)
T d1ky8a_ 353 AVEKGGRVLAGGRR------LGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVF 426 (499)
T ss_dssp HHHTTCEEEECCCE------EETTEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEE
T ss_pred HHHcCCEEeeeecc------ccccccccccccccccCCCCChhhhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEE
Confidence 99999999999873 233344444443 446799999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 394 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 394 s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
|+|.+.++++++++++|+|+||++.++. .+.+||||+|.||+|++||.+|+++||+.|+|+.+
T Consensus 427 s~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~ 489 (499)
T d1ky8a_ 427 GRDVVKIRRAVRLLEVGAIYINDMPRHG-IGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFN 489 (499)
T ss_dssp CCCHHHHHHHHHHCCSSEEEETSCCCCT-TSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEE
T ss_pred cCCHHHHHHHHHhCCEeEEEEeCCCCCC-CCCCCccccccCcCCCCCHHHHHHHhhCEEEEEEc
Confidence 9999999999999999999999987765 46799999999999999999999999999999874
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=1e-82 Score=676.39 Aligned_cols=441 Identities=32% Similarity=0.465 Sum_probs=402.6
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|.+++++|++++++|+||+..++. .|+...+.
T Consensus 27 g~~i~~~~~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~~a~~L~~~~~~la~~~~~e~Gk~~~~a~-~e~~~~~~ 105 (474)
T d1euha_ 27 GAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTAE 105 (474)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCcchhc-cccchhHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999984 69999999
Q ss_pred HHHHHHHccccccCcccc--cCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 81 KITWLLSEGEKWLKPEYR--SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
.++++............. ..+....+...+++++|+|||++|+|||||+...+..+++||++||+||+|||+.+|.++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~~~~~~~aL~aGN~vV~Kps~~~~~~~ 185 (474)
T d1euha_ 106 IINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISG 185 (474)
T ss_dssp HHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHH
T ss_pred HHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccchhhhhhchhhhhccccceecccccchHHH
Confidence 999887765544322211 111222345567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEc
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~ 235 (522)
.++.+++. ++|+|+|++|+|+|++ +.++.|+. .++.|+||||..+++.+++.++ .+|+++|+||+||+||+
T Consensus 186 ~~l~~~~~----eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i~~~a~--~k~~~~e~gG~~~~iV~ 259 (474)
T d1euha_ 186 LLLAEAFA----EAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVL 259 (474)
T ss_dssp HHHHHHHH----HHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEEECCCCEEEEEC
T ss_pred HHHHHHHH----HhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccchhhhcc--cceEEEecCCcceEEEE
Confidence 98887765 6899999999999984 68888987 8999999999999999998876 78999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 236 ~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
+|||++.|++.+++++|.|+||.|+++++||||++++|+|++.++++...++.|++.+. .++++++...+.+++.+.+.
T Consensus 260 ~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 338 (474)
T d1euha_ 260 EDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDD-ADITPLIDTKSADYVEGLIN 338 (474)
T ss_dssp TTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGT-CSBCCCSCHHHHHHHHHHHH
T ss_pred CCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhccccCcccc-cccccccchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988654 57899999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
+....++..+.++. ..|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 339 ~~~~~~~~~~~~~~-------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~glta~v~s~ 411 (474)
T d1euha_ 339 DANDKGATALTEIK-------REGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTN 411 (474)
T ss_dssp HHHHTTCEECSCCC-------EETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECS
T ss_pred hhhcccccccccCC-------CCCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCHHHHHHHHHCCCCCCeEEEEeC
Confidence 98888887765443 57899999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
|.+.++++++++++|+|+||++..+. .+.+||||+|+||+|++||++|+++||+.|+|+.+
T Consensus 412 d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 472 (474)
T d1euha_ 412 DFPRAFGIAEQLEVGTVHINNKTQRG-TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 472 (474)
T ss_dssp CHHHHHHHHHHSCSSEEEESSCCCCC-STTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred CHHHHHHHHHhCCEEEEEEECCCCCC-CCCCCccccccCccCccCHHHHHHHhCcEEEEEEe
Confidence 99999999999999999999975554 56799999999999999999999999999999864
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=8.7e-78 Score=640.09 Aligned_cols=434 Identities=16% Similarity=0.214 Sum_probs=369.8
Q ss_pred CceeE-EecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLG-YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~-~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
||+|+ +++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|+++++.|+||+..++. +|+..++
T Consensus 13 ge~l~~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~~a~-~Ev~~~~ 91 (504)
T d1ez0a_ 13 GEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLT-GEIARTA 91 (504)
T ss_dssp SSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCcchhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 78897 799999999999999999999999999999999999999999999999999999999999999985 7999999
Q ss_pred HHHHHHHHccccccCcccc-----cCCcccccccceEEEeeceEEEEEccCchhhhhh--hHHHHHHhhcCCEEEEecCC
Q 009919 80 EKITWLLSEGEKWLKPEYR-----SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI--FNPMLAAVFSGNGIVIKVSE 152 (522)
Q Consensus 80 ~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~--~~~~~~ALaaGN~VvlKps~ 152 (522)
+.++|+++.++++...... +..........+..++|+|||++|+|||||+... ..++++||++||+||+|||+
T Consensus 92 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaaGN~VVlKPs~ 171 (504)
T d1ez0a_ 92 NQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHT 171 (504)
T ss_dssp HHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCT
T ss_pred HHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHHHhccceecCcc
Confidence 9999998877654432221 1111122346678889999999999999998754 46899999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceee--eCC
Q 009919 153 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL--ELG 227 (522)
Q Consensus 153 ~~~~~~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~l--elg 227 (522)
.+|.++.++.+++.+++.++|+|+|++++|+|++ +.++.|++ ++|+|+||||+.+|+.|++.++++++|+.+ |||
T Consensus 172 ~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~~~~~~l~~ElG 251 (504)
T d1ez0a_ 172 AHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELG 251 (504)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECC
T ss_pred cccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhccccccccccccc
Confidence 9999999999999999999999999999999975 67899987 899999999999999999999999987655 999
Q ss_pred CcceEEEcCCCCHHHHH--HHHHHHHHHcCCCCcccCCeeEEchhh-HHHHHHHHHHHHHhccCCCCCCCCCcccccCCH
Q 009919 228 GKDAFIVCDDVDVPHVA--QIAVRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 304 (522)
Q Consensus 228 Gk~p~iV~~daDl~~aa--~~i~~~~~~n~Gq~C~a~~~v~V~~~i-~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~ 304 (522)
||||+||++|||++.|+ ..+++++|.|+||.|++++++||+++. .+.|++.+++.++.. ++++.+||+++.
T Consensus 252 Gknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~~------~~~~~~gp~i~~ 325 (504)
T d1ez0a_ 252 AINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQ------SPSTLLTPGIRD 325 (504)
T ss_dssp CCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHC------CCBCCSSHHHHH
T ss_pred ccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhhc------ccccccccchhh
Confidence 99999999999999875 479999999999999999999987764 457777777766643 346789999999
Q ss_pred HHHHHHHHHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEec---CCCCCcccccccccceeeeeecCCHHHHHHHH
Q 009919 305 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN---VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLA 381 (522)
Q Consensus 305 ~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~---~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~ 381 (522)
.+++++ ++.+...|+++..||. .+.+..|+++.. +..++++++||+||||++|++|+|+||||+++
T Consensus 326 ~~~~~v---i~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~a 394 (504)
T d1ez0a_ 326 SYQSQV---VSRGSDDGIDVTFSQA--------ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLS 394 (504)
T ss_dssp HHHHHH---HHHHTSTTEEEEECCC--------CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHH
T ss_pred hhhhhh---hhhhhhhhhhcccccc--------cccccCCccccccccccccchhhcccccCCeeeeeecCCHHHHHHHH
Confidence 888776 4555667888877765 344555655543 33578899999999999999999999999999
Q ss_pred hcCCCCceeEEecCc--HHHHHHHHHHhc--cCCeeecCCcccC-----CCCCCCccCCCCCCCCCcchHHHHHhchhce
Q 009919 382 NDSRYGLGCAVFSGS--QHRAREIAAQIQ--CGVAAINDFASNY-----MCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 452 (522)
Q Consensus 382 n~~~~gL~a~v~s~d--~~~~~~~~~~l~--~G~v~IN~~~~~~-----~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k 452 (522)
|+++|||++||||+| ..++.+++++|+ +|+|+||++++.. ..+..||||.+.||.|+ +|.+++++|+++.
T Consensus 395 n~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~~-~G~~~i~~f~r~v 473 (504)
T d1ez0a_ 395 EMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTS-VGAEAIHRWLRPV 473 (504)
T ss_dssp HTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCS-SSGGGGGGGEEEE
T ss_pred HCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCCc-chHHHHHHHhchh
Confidence 999999999999974 458899999997 7999999975422 22346899999999664 5899999998654
Q ss_pred E
Q 009919 453 S 453 (522)
Q Consensus 453 ~ 453 (522)
+
T Consensus 474 ~ 474 (504)
T d1ez0a_ 474 A 474 (504)
T ss_dssp E
T ss_pred h
Confidence 4
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.3e-65 Score=533.08 Aligned_cols=392 Identities=17% Similarity=0.173 Sum_probs=313.1
Q ss_pred HHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhH------------HHHHHH
Q 009919 13 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE------------IMTTCE 80 (522)
Q Consensus 13 ~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~E------------i~~~~~ 80 (522)
+|+.+++++|++||+.|+++|..+|.++|++++++|++|+++|++++++|+||+..++. +| +...++
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~-~e~~~~rl~~~~~~i~~~~~ 79 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGV-KESLVDRLALNDKRIDEMIK 79 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTC-CHHHHHHHCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhccc-cHHHHHHHhccHHHHHHHHH
Confidence 37889999999999999999999999999999999999999999999999999887753 34 445566
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++......... ... .........+.++|+||++++.|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 80 ~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~ 155 (414)
T d1o20a_ 80 ACETVIGLKDPVGE-VID---SWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKA 155 (414)
T ss_dssp HHHHHHHSCCCTTC-EEE---EEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHHhhhhccc-ccc---ccccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccch
Confidence 66666654332111 110 01122445778899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhcCccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcc-eEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD-AFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~-p~iV~~da 238 (522)
+++++.+++...|+|.++++.+.+.. +.+..++ ..+.+.||||+..+..+.+.++++++++++|+||+| |+||++||
T Consensus 156 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~a~~~~~~~~le~gGgn~~viv~~dA 234 (414)
T d1o20a_ 156 IVSAIREALKETEIPESSVEFIENTDRSLVLEMI-RLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESA 234 (414)
T ss_dssp HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHT-TCTTTCSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTS
T ss_pred hhhHHHhhhhhccccccccccccccchhhhhhcc-cccccCeEEEcccHHHHHHHhhhccccceecccCCCCCeeccccc
Confidence 99999999999999999998887654 4444444 334455555555566677888888888888888866 57888999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.+++++|.| ||.|+++++++||+++||+|++.|.+...+..++.+. .+.. .
T Consensus 235 d~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~----------~~~~--------~--- 292 (414)
T d1o20a_ 235 DLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRG----------CEKT--------R--- 292 (414)
T ss_dssp CHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEE----------CHHH--------H---
T ss_pred chhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCcccc----------chhh--------h---
Confidence 9999999999999877 9999999999999999999999999988876543321 1111 0
Q ss_pred HcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHH
Q 009919 319 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 398 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 398 (522)
.+.+.+... ....+++|+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 293 ----------------------~~~~~~~~~---~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~ 347 (414)
T d1o20a_ 293 ----------------------EIVPDVVPA---TEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYS 347 (414)
T ss_dssp ----------------------HHSTTSEEC---CGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHH
T ss_pred ----------------------hhcccceec---ccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHH
Confidence 011111111 2234689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCC--CCcc--hHHHHHhchhceEEEEccc
Q 009919 399 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGF--GRFA--GVEGLRACCLVKSVVEDRW 459 (522)
Q Consensus 399 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~--G~~~--g~~~l~~ft~~k~v~~~~~ 459 (522)
+++++++++++|.|+||+.+.+... .|||+.|.||+ |+.| |++|+++||+.|+|+++.+
T Consensus 348 ~a~~~~~~i~~G~V~IN~~~~~~~~--~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~~~ 410 (414)
T d1o20a_ 348 NAKKFVSEIDAAAVYVNASTRFTDG--GQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEY 410 (414)
T ss_dssp HHHHHHHHCCSSEEEESSCGGGCST--TTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred HHHHHHHhCCeeEEEEeCCCcCCCC--CCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEECCC
Confidence 9999999999999999987544332 34544444554 4444 8999999999999987654
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.7e-52 Score=432.39 Aligned_cols=407 Identities=15% Similarity=0.098 Sum_probs=281.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHh------cCCChhhh-h--h---hHHHHHHHH
Q 009919 14 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRD------TGKTMVDA-S--L---GEIMTTCEK 81 (522)
Q Consensus 14 ~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e------~Gk~~~ea-~--~---~Ei~~~~~~ 81 (522)
+++++++.|++|++.|+.+|.++|.++|+++++.|++++++|+++..+| .|++...- + + ..+...++.
T Consensus 4 ~~e~~~~~Ak~A~~~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~~~ 83 (436)
T d1vlua_ 4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 83 (436)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHHHH
Confidence 4667889999999999999999999999999999999999999875554 44432110 0 0 124444555
Q ss_pred HHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHH
Q 009919 82 ITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFY 161 (522)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l 161 (522)
++..++..+..-. .........+...+..+.|+||+++| ||++| ..++.....||++||+||+||++.++.|+..+
T Consensus 84 l~~i~~~~dpvg~--~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l 159 (436)
T d1vlua_ 84 IKDVAELEDPVGK--VKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREM 159 (436)
T ss_dssp HHHHHHSCCSSSC--EEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHhcccccee--EeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHH
Confidence 5555443211100 00000111234566788899999998 67778 56777888899999999999999999999988
Q ss_pred HHHHH----HHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEc
Q 009919 162 FRIIQ----AALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235 (522)
Q Consensus 162 ~~~~~----~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~ 235 (522)
.++++ +++.++|+|+++++++++..+.++.|.. .+|.|+||||...++.+.+.+. +|++.|+||++|+||+
T Consensus 160 ~~~~~~al~~a~~~aGlP~~~i~~v~~~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~~---~pvi~~~~G~~~~~Vd 236 (436)
T d1vlua_ 160 AKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK---IPVLGHADGICSIYLD 236 (436)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTCC---SCBTTBCSCCEEEEEC
T ss_pred HHHHHHhhhhhccccCCCCceEEEecchhHHHHHhccCCCCceEEEecCCceeeeeecccc---ceEEEecCCccceeec
Confidence 88876 5567789999999999987777777776 8999999999999888776654 6999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 236 ~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
+|||++.|++.++.++|.++|| |++.++++||+++++.|...+....+. |... . .++.........+.
T Consensus 237 ~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~---gv~l------~--~~~~~~~~~~~~~~ 304 (436)
T d1vlua_ 237 EDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEG---GVTI------H--ATKDLKTAYFDKLN 304 (436)
T ss_dssp TTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHH---CCCB------E--ECHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHhC---CcEE------E--eCHHHHHHhhhhhh
Confidence 9999999999999999999998 999999999999998886655544443 1111 0 02222222221111
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
..+ . ..+....|++....+.+ +.+|.|+|+++|++|+|+||||+++|+.++||+++|||+
T Consensus 305 ----~~~------~-------~~~~~~~~~~~~~~~~d---~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~ 364 (436)
T d1vlua_ 305 ----ELG------K-------LTEAIQCKTVDADEEQD---FDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTE 364 (436)
T ss_dssp ----HHT------C-------CCHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECS
T ss_pred ----hcc------c-------ccccccccccCCCcccc---hhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEEC
Confidence 111 1 11223334443332222 689999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCC-CCC-CCCCcchHHHHHhchhceEEEEccc
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGV-KDS-GFGRFAGVEGLRACCLVKSVVEDRW 459 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~-~~S-G~G~~~g~~~l~~ft~~k~v~~~~~ 459 (522)
|.+.+++|++++++|.|+||....+.....+.||+- |.| +....+|+.|++++|..|.+++...
T Consensus 365 d~~~a~~F~~~vda~~V~vNasTrf~Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g~g 430 (436)
T d1vlua_ 365 NKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGDG 430 (436)
T ss_dssp CHHHHHHHHHHCCCSEEEESSCGGGCC----------------------CCSGGGEEEEEEEECSS
T ss_pred CHHHHHHHHHhCCceEEEEcCCCccCCCCcccCcceeeEecCCCCCCCCcChHHhceEEEEEECCC
Confidence 999999999999999999998755433222334332 333 3334579999999999999987653
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=97.48 E-value=0.045 Score=53.23 Aligned_cols=256 Identities=16% Similarity=0.136 Sum_probs=153.1
Q ss_pred cccceEEEeeceEEEEEccCc---hhhhhhhHHHHHHhhcCCE--EEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEe
Q 009919 106 HKKAKVEFHPLGVVGAIVSWN---YPFHNIFNPMLAAVFSGNG--IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180 (522)
Q Consensus 106 ~~~~~~~~~P~GVv~vi~p~N---~P~~~~~~~~~~ALaaGN~--VvlKps~~~~~~~~~l~~~~~~~l~~ag~p~g~v~ 180 (522)
+.....++.|+--|++..|.- ||- +.+...+||-.||.. |+.-|....|.+ ++ +.+.+|..+ ++.
T Consensus 111 Gv~~g~~~~PI~~VGlYVPGG~A~ypS-svLM~aiPAkvAGV~~Ivv~tPp~~~~~~---l~-----aa~~~Gv~~-iy~ 180 (431)
T d1k75a_ 111 GVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPPIADEI---LY-----AAQLCGVQD-VFN 180 (431)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCHH-HHHHHHHHHHHHTCSEEEEEECSSCCHHH---HH-----HHHHTTCCE-EEE
T ss_pred CceeeeeeeehhhheeeccCCCccchH-HHHHHHHHHHhcCCCceeEEeCCCCcchH---HH-----HHHHcCccc-eEe
Confidence 456677888999999999965 554 466778899999974 455666555543 11 123467755 222
Q ss_pred eecCcchhhhhHhc------CccEEEEeCCHHHHHHHHHHHhcCCCce-eeeCCCcce--EEEcCCCCHHHHHHHHHHHH
Q 009919 181 VITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPV-TLELGGKDA--FIVCDDVDVPHVAQIAVRAA 251 (522)
Q Consensus 181 vv~g~~~~~~~L~~------~vd~V~ftGS~~~g~~v~~~aa~~~~pv-~lelgGk~p--~iV~~daDl~~aa~~i~~~~ 251 (522)
+ |+.+...+|.- ++|+|+=.|+.=+..+=.+...... .| +=-+-|.+= +|-++++|.+..|..++..+
T Consensus 181 -~-GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~~-~vgID~~aGPSEv~viAD~~a~p~~iAaDllaQA 257 (431)
T d1k75a_ 181 -V-GGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLD-GAAIDMPAGPSEVLVIADSGATPDFVASDLLSQA 257 (431)
T ss_dssp -C-CHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHSTT-SCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHH
T ss_pred -c-CChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccCC-ccccccccCCceEEEEecCCCCHHHHHHHHHhcc
Confidence 2 55565555532 8999998888765432222222111 12 111244444 33355699999998888776
Q ss_pred HHcCCCCcccCCeeEEc--hhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccC
Q 009919 252 LQSSGQNCAGAERFYVH--RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 329 (522)
Q Consensus 252 ~~n~Gq~C~a~~~v~V~--~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~ 329 (522)
=+...- +.++|. ++..++..+.+.+.++.+.- . +..+...
T Consensus 258 EH~~~a-----~~ilvt~~~~l~~~v~~~i~~~l~~l~r---------------~-------~i~~~s~----------- 299 (431)
T d1k75a_ 258 EHGPDS-----QVILLTPAADMARRVAEAVERQLAELPR---------------A-------ETARQAL----------- 299 (431)
T ss_dssp TTCTTC-----EEEEEESCHHHHHHHHHHHHHHHHTCSS---------------C-------HHHHHHH-----------
T ss_pred CCcccc-----eeEEEeccHHHHHHHHHHHHHHhhhchH---------------H-------HHHHhhh-----------
Confidence 554442 334443 45666666666666655420 0 0111111
Q ss_pred CCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHh-c
Q 009919 330 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI-Q 408 (522)
Q Consensus 330 ~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l-~ 408 (522)
+-. .++.++|++||++++|..- +=-..|.++|.. +++.++ .
T Consensus 300 ------------------------------~~~----~ii~v~~~~ea~~~~N~~A-PEHL~l~~~~~~---~~~~~i~n 341 (431)
T d1k75a_ 300 ------------------------------NAS----RLIVTKDLAQCVEISNQYG-PEHLIIQTRNAR---ELVDSITS 341 (431)
T ss_dssp ------------------------------TTC----EEEECSSHHHHHHHHHHHC-CSEEEEESTTHH---HHGGGCCC
T ss_pred ------------------------------ccc----eEEEecCHHHHHHHHHhhh-HHHHHHHhcCHH---HHHhhhhh
Confidence 001 1345689999999999852 234778888764 356665 6
Q ss_pred cCCeeecCCcc-------cCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 409 CGVAAINDFAS-------NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 409 ~G~v~IN~~~~-------~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
+|.|++..+.. ...++-+|-|| .+|+.+.-+.+.|...-++.
T Consensus 342 AGsIflG~~sp~a~GDY~aGpnHvLPT~G-----~Ar~~sgLsv~dF~k~~s~~ 390 (431)
T d1k75a_ 342 AGSVFLGDWSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTVQ 390 (431)
T ss_dssp CSEEEESTTCCHHHHHHTSSSCCCCCCTT-----GGGTCCCCCGGGGEEEEEEE
T ss_pred cchhhcCCCCcchhhccccCCCccCCCCC-----ceeecCCCCHHHeeeeeeEE
Confidence 99999988521 12355677755 55666666678888766654
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