Citrus Sinensis ID: 009934

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520--

MAMAGLYRRMLPSPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKEKGISFGKLVCLAHCAGAKVEAFRTNQSTIDDFRKYIIRCSASEDCHVISSYHRGAFKQTGTGHFSPIGGYHAGRDMALILDVARFKYPPHWVPLTLLWEAMDRVDDATGQRRGFVLVSRPHREPGLLYTLSCKHENWVGIAKYLVDEVPKIVKSKDFKDFEEVLTVLFTSLPSNFGEFVKWVAEVRRREDGDHSLSQEEKGRLALKEEVLRQVQETLLFKHVVTFLSSVNSCCRSMSVLVHKNELPDIAEKVCCQGARILAGKFDSSERFYCRETCVKCLKANSDKPVTLVSGTVVNGSIEQEVDVLVPSSQIGGCGCGCGPSNCIGIYPAGNDILTVLILALPKETWSGIRDEKLSRQILGLVTTENLPTLLQEEVLHLRRQLHILRRCQENKKQMVSPQGSNDLVNDGKLLSRDQNLTMKR

cccccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccHHHHHHHHHHccccccccccccccccccccccccccHHHHHHccccHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHcccccEEEEEEccccccccccccccccccccccccEEEEEEccccccccccccHHHHHHHccccccccccEEEEEEEEccccccccEEEEEcccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccccccccccccccHHHHHHHHHcHHHHHHHcccccccccEEcccccccEEccccccEEEEEEEEEEccccccEEEEEEccccccccccccccccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccc

ccHHHHHccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccccccccEEEcHHHccccccHHHHHHccccHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHcccccEEEEEEcHHHccccccccccccccccccccEEEEEEcccccccccEEcHHHHHHHHcccccccccccEEEEEEcccccccEEEEEEcccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHccccccccccEEEEEEEEEEEEcccccEEEEEEEEEccccccccEEEEEccccccccccccccccEEEccccccHHHHHHHHccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcHHHccccccccccccccccccccccccccc

mamaglyrrmlpsppaidfassEGKQLFLEAIQGGTMEGFYRLISYFqtqsepaycgLASLSMVLNALaidpgrkwkgpwrwfdesmldccePLEKVKEKGISFGKLVCLAHCAGAKVEAFRTNQSTIDDFRKYIIRCsasedchvissyhrgafkqtgtghfspiggyhagRDMALILDVArfkypphwvplTLLWEAMDrvddatgqrrgfvlvsrphrepgllytlsckheNWVGIAKYLVdevpkivkskdfkDFEEVLTVLFTSLPSNFGEFVKWVAEVRRredgdhslsqEEKGRLALKEEVLRQVQETLLFKHVVTFLSSVNSCCRSMSVlvhknelpdiAEKVCCQGARilagkfdsserfycRETCVKCLkansdkpvtlvsgtvvngsieqevdvlvpssqiggcgcgcgpsncigiypagNDILTVLILALpketwsgirdekLSRQILglvttenlpTLLQEEVLHLRRQLHILRRCQENkkqmvspqgsndlvndgkllsrdqnltmkr

MAMAGLYRRMLPSPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKEKGISFGKLVCLAHCAGAkveafrtnqstidDFRKYIIRCSASEDCHVISSYHRGAFKQTGTGHFSPIGGYHAGRDMALILDVARFKYPPHWVPLTLLWEAMDRVDDATGQRRgfvlvsrphrepGLLYTLSCKHENWVGIAKYLVDEVPKIVKSKDFKDFEEVLTVlftslpsnfgEFVKWVAEVRRRedgdhslsqeekgrlaLKEEVLRQVQETLLFKHVVTFLSSVNSCCRSMSVLVHKNELPDIAEKVCCQGARILagkfdsserfYCRETCVKclkansdkpvtlVSGTVVNGSIEQEVDVLVPSSQIGGCGCGCGPSNCIGIYPAGNDILTVLILALPKETWSGIRDEKLSRQILGLVTTENLPTLLQEEVLHLRRQLHILRRCQEnkkqmvspqgsndlvndgkllsrdqnltmkr

MAMAGLYRRMLPSPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKEKGISFGKLVCLAHCAGAKVEAFRTNQSTIDDFRKYIIRCSASEDCHVISSYHRGAFKQTGTGHFSPIGGYHAGRDMALILDVARFKYPPHWVPLTLLWEAMDRVDDATGQRRGFVLVSRPHREPGLLYTLSCKHENWVGIAKYLVDEVPKIVKSKDFKDFEEVLTVLFTSLPSNFGEFVKWVAEVRRREDGDHSLSQEEKGRLALKEEVLRQVQETLLFKHVVTFLSSVNSCCRSMSVLVHKNELPDIAEKVCCQGARILAGKFDSSERFYCRETCVKCLKANSDKPVTLVSGTVVNGSIEQEVDVLVPSSQIggcgcgcgPSNCIGIYPAGNDILTVLILALPKETWSGIRDEKLSRQILGLVTTENLPTLLQEEVlhlrrqlhilrrCQENKKQMVSPQGSNDLVNDGKLLSRDQNLTMKR

************************KQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKEKGISFGKLVCLAHCAGAKVEAFRTNQSTIDDFRKYIIRCSASEDCHVISSYHRGAFKQTGTGHFSPIGGYHAGRDMALILDVARFKYPPHWVPLTLLWEAMDRVDDATGQRRGFVLVSRPHREPGLLYTLSCKHENWVGIAKYLVDEVPKIVKSKDFKDFEEVLTVLFTSLPSNFGEFVKWVAEV*******************LKEEVLRQVQETLLFKHVVTFLSSVNSCCRSMSVLVHKNELPDIAEKVCCQGARILAGKFDSSERFYCRETCVKCLKANSDKPVTLVSGTVVNGSIEQEVDVLVPSSQIGGCGCGCGPSNCIGIYPAGNDILTVLILALPKETWSGIRDEKLSRQILGLVTTENLPTLLQEEVLHLRRQLHILRRC*********************************

***AGLYRRMLPSPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKEKGISFGKLVCLAHCAGAKVEAFRTNQSTIDDFRKYIIRCSASEDCHVISSYHRGAFKQTGTGHFSPIGGYHAGRDMALILDVARFKYPPHWVPLTLLWEAMDRVDDATGQRRGFVLVSRPHREPGLLYTLSCKHENWVGIAKYLVDEVPKIVKSKDFKDFEEVLTVLFTSLPSNFGEFVKWVAEVRR**************RLALKEEVLRQVQETLLFKHVVTFLSSVN*************ELPDIAEKVCCQGARILAGKFDSSERFYCRETCVKCLKANSDKPVTLVSGTVVNGSIEQEVDVLVPS*****************IYPAGNDILTVLILALPKETWSGIRDEKLSRQILGLVTTENLPTLLQEEVLHLRRQLHILRRC****************VNDGKLLSRD**L****

MAMAGLYRRMLPSPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKEKGISFGKLVCLAHCAGAKVEAFRTNQSTIDDFRKYIIRCSASEDCHVISSYHRGAFKQTGTGHFSPIGGYHAGRDMALILDVARFKYPPHWVPLTLLWEAMDRVDDATGQRRGFVLVSRPHREPGLLYTLSCKHENWVGIAKYLVDEVPKIVKSKDFKDFEEVLTVLFTSLPSNFGEFVKWVAEVRR************KGRLALKEEVLRQVQETLLFKHVVTFLSSVNSCCRSMSVLVHKNELPDIAEKVCCQGARILAGKFDSSERFYCRETCVKCLKANSDKPVTLVSGTVVNGSIEQEVDVLVPSSQIGGCGCGCGPSNCIGIYPAGNDILTVLILALPKETWSGIRDEKLSRQILGLVTTENLPTLLQEEVLHLRRQLHILRRCQE*********GSNDLVNDGKLLSRDQNLTMKR

****GLYRRMLPSPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKEKGISFGKLVCLAHCAGAKVEAFRTNQSTIDDFRKYIIRCSASEDCHVISSYHRGAFKQTGTGHFSPIGGYHAGRDMALILDVARFKYPPHWVPLTLLWEAMDRVDDATGQRRGFVLVSRPHREPGLLYTLSCKHENWVGIAKYLVDEVPKIVKSKDFKDFEEVLTVLFTSLPSNFGEFVKWVAEVRRREDGDHSLSQEEKGRLALKEEVLRQVQETLLFKHVVTFLSSVNSCCRSMSVLVHKNELPDIAEKVCCQGARILAGKFDSSERFYCRETCVKCLKANSDKPVTLVSGTVVNGSIEQEVDVLVPSSQIGGCGCGCGPSNCIGIYPAGNDILTVLILALPKETWSGIRDEKLSRQILGLVTTENLPTLLQEEVLHLRRQLHILRRCQENKKQM*************KLL**********

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

oooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

oooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		522	2.2.26 [Sep-21-2011]
Q2TSC7		501	Glutathione gamma-glutamy	N/A	no	0.938	0.978	0.704	0.0
Q9S7Z3		485	Glutathione gamma-glutamy	yes	no	0.913	0.983	0.666	0.0
Q9ZWB7		452	Glutathione gamma-glutamy	no	no	0.850	0.982	0.623	0.0
Q9SWW5		500	Glutathione gamma-glutamy	N/A	no	0.954	0.996	0.600	1e-171
Q2QKL5		479	Glutathione gamma-glutamy	N/A	no	0.898	0.979	0.610	1e-169
Q2TE74		482	Glutathione gamma-glutamy	N/A	no	0.900	0.975	0.599	1e-163
Q10075		414	Glutathione gamma-glutamy	yes	no	0.503	0.635	0.404	4e-58

>sp\|Q2TSC7\|PCS1_LOTJA Glutathione gamma-glutamylcysteinyltransferase 1 OS=Lotus japonicus GN=PCS1 PE=2 SV=1	Back alignment and function desciption

 Score =  737 bits (1903), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/494 (70%), Positives = 408/494 (82%), Gaps = 4/494 (0%)

Query: 1   MAMAGLYRRMLPSPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLAS 60
           MAMAGLYRR+LPSPPA+DFASS+GKQLFLEA+Q GTME FYRL+SYFQTQSEPA+CGLAS
Sbjct: 1   MAMAGLYRRLLPSPPAVDFASSQGKQLFLEAVQNGTMESFYRLVSYFQTQSEPAFCGLAS 60

Query: 61  LSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKEKGISFGKLVCLAHCAGAKVEA 120
           LSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPL+K+K +GISFGKLVCLAHCAGAKVEA
Sbjct: 61  LSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLDKIKARGISFGKLVCLAHCAGAKVEA 120

Query: 121 FRTNQSTIDDFRKYIIRCSASEDCHVISSYHRGAFKQTGTGHFSPIGGYHAGRDMALILD 180
           F  + S+ID FRKY+++CS S+DCHVISSYHR A KQTGTGHFSPIGGYHAG+DMALILD
Sbjct: 121 FHASHSSIDHFRKYVMKCSTSDDCHVISSYHREALKQTGTGHFSPIGGYHAGKDMALILD 180

Query: 181 VARFKYPPHWVPLTLLWEAMDRVDDATGQRRGFVLVSRPHREPGLLYTLSCKHENWVGIA 240
           VARFKYPPHW+PLT LWE M+ VD++TG+ RGF+L+SRPHREPG+LYTLSCKHE+W  IA
Sbjct: 181 VARFKYPPHWIPLTHLWEGMNYVDESTGKTRGFMLISRPHREPGMLYTLSCKHESWNSIA 240

Query: 241 KYLVDEVPKIVKSKDFKDFEEVLTVLFTSLPSNFGEFVKWVAEVRRREDGDHSLSQEEKG 300
           K+L+D++P ++ S+D KD  +VL+V+ TSLPSNF EF+KWVAE+RR EDG  SLS EEK 
Sbjct: 241 KFLIDDIPFLLTSEDVKDICKVLSVIVTSLPSNFEEFIKWVAEIRRGEDGSPSLSVEEKA 300

Query: 301 RLALKEEVLRQVQETLLFKHVVTFLSSVNSCCRSMSVLVHKNELPDIAEKVCCQGARILA 360
           RL++KEE+L+QVQ T LFKHV +FLS  +SC         ++  P IA  VCCQGA IL 
Sbjct: 301 RLSVKEEILKQVQRTGLFKHVASFLS--HSCSGHTPTSGDRDTFPVIAASVCCQGAEILG 358

Query: 361 GKFDSSERFYCRETCVKCLKANSDKPVTLVSGTVVNGSIEQEVDVLVPSSQIGGCGCGCG 420
           GK  SS  + CRETC+KC KA  DKP+ +V GTVVNG+ EQ VDVL+PSS  G   C C 
Sbjct: 359 GKISSSAEYCCRETCMKCWKAEDDKPIRMVCGTVVNGNTEQGVDVLIPSS-CGKLSCTCS 417

Query: 421 PSN-CIGIYPAGNDILTVLILALPKETWSGIRDEKLSRQILGLVTTENLPTLLQEEVLHL 479
            +   I  +PA  D+LTVL+L+LP  TW+GI DEKL  +I  LV+ ENLP LLQEEVLHL
Sbjct: 418 STTKSIRKHPASTDVLTVLLLSLPTSTWAGIADEKLLSEIHDLVSIENLPALLQEEVLHL 477

Query: 480 RRQLHILRRCQENK 493
           RRQLHIL+RCQE K
Sbjct: 478 RRQLHILKRCQEGK 491

Involved in the synthesis of phytochelatins (PC) and homophytochelatins (hPC), the heavy-metal-binding peptides of plants.
Lotus japonicus (taxid: 34305)
EC: 2EC: .EC: 3EC: .EC: 2EC: .EC: 1EC: 5

>sp\|Q9S7Z3\|PCS1_ARATH Glutathione gamma-glutamylcysteinyltransferase 1 OS=Arabidopsis thaliana GN=PCS1 PE=1 SV=1	Back alignment and function description

>sp\|Q9ZWB7\|PCS2_ARATH Glutathione gamma-glutamylcysteinyltransferase 2 OS=Arabidopsis thaliana GN=PCS2 PE=2 SV=1	Back alignment and function description

>sp\|Q9SWW5\|PCS1_WHEAT Glutathione gamma-glutamylcysteinyltransferase 1 OS=Triticum aestivum GN=PCS1 PE=2 SV=1	Back alignment and function description

>sp\|Q2QKL5\|PCS3_LOTJA Glutathione gamma-glutamylcysteinyltransferase 3 OS=Lotus japonicus GN=PCS3 PE=2 SV=1	Back alignment and function description

>sp\|Q2TE74\|PCS2_LOTJA Glutathione gamma-glutamylcysteinyltransferase 2 OS=Lotus japonicus GN=PCS2 PE=2 SV=2	Back alignment and function description

>sp\|Q10075\|PCS_SCHPO Glutathione gamma-glutamylcysteinyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.10 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		522
255577926		502	conserved hypothetical protein [Ricinus	0.942	0.980	0.782	0.0
224129600		503	predicted protein [Populus trichocarpa]	0.944	0.980	0.784	0.0
254935134		501	phytochelatin synthase isoform 3 [Sesban	0.938	0.978	0.732	0.0
225438071		481	PREDICTED: glutathione gamma-glutamylcys	0.896	0.972	0.748	0.0
373405317		497	phytochelatin synthase [Pyrus betulifoli	0.932	0.979	0.750	0.0
388518807		503	unknown [Lotus japonicus]	0.938	0.974	0.704	0.0
122208907		501	RecName: Full=Glutathione gamma-glutamyl	0.938	0.978	0.704	0.0
297744174		466	unnamed protein product [Vitis vinifera]	0.869	0.974	0.749	0.0
449445618		504	PREDICTED: glutathione gamma-glutamylcys	0.940	0.974	0.719	0.0
351725998		498	homo-phytochelatin synthase [Glycine max	0.934	0.979	0.722	0.0

>gi\|255577926\|ref\|XP_002529835.1\| conserved hypothetical protein [Ricinus communis] gi\|223530663\|gb\|EEF32536.1\| conserved hypothetical protein [Ricinus communis]	Back alignment and taxonomy information

 Score =  812 bits (2097), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/493 (78%), Positives = 442/493 (89%), Gaps = 1/493 (0%)

Query: 1   MAMAGLYRRMLPSPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLAS 60
           MAMAGLYRR+LPSPPAIDFASSEGKQLF+EAIQ GTMEGFYRLISYFQTQSEPAYCGLAS
Sbjct: 1   MAMAGLYRRLLPSPPAIDFASSEGKQLFIEAIQNGTMEGFYRLISYFQTQSEPAYCGLAS 60

Query: 61  LSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKEKGISFGKLVCLAHCAGAKVEA 120
           LS+VLNALAIDPGRKWKGPWRWFDESMLDCCEPLE VK KGISFGKLVCLAHCAGAKVEA
Sbjct: 61  LSVVLNALAIDPGRKWKGPWRWFDESMLDCCEPLETVKAKGISFGKLVCLAHCAGAKVEA 120

Query: 121 FRTNQSTIDDFRKYIIRCSASEDCHVISSYHRGAFKQTGTGHFSPIGGYHAGRDMALILD 180
           +RTNQSTID+FR+++I+C+ ++DCH+ISSYHRG FKQTGTGHFSPIGGYHAGRDMALILD
Sbjct: 121 YRTNQSTIDEFRQHVIKCTTTDDCHLISSYHRGTFKQTGTGHFSPIGGYHAGRDMALILD 180

Query: 181 VARFKYPPHWVPLTLLWEAMDRVDDATGQRRGFVLVSRPHREPGLLYTLSCKHENWVGIA 240
           VARFKYPPHWVPLTLLWEAM+ +D  TGQRRGF+L+SRPHREPGLLYTLSCKHE+W  IA
Sbjct: 181 VARFKYPPHWVPLTLLWEAMNNIDVTTGQRRGFMLISRPHREPGLLYTLSCKHESWASIA 240

Query: 241 KYLVDEVPKIVKSKDFKDFEEVLTVLFTSLPSNFGEFVKWVAEVRRREDGDHSLSQEEKG 300
           KYLVD+VP ++KS+D KD   +L V+FTSLPSNFGEF+KWVAEVRR+EDG  +LSQEEKG
Sbjct: 241 KYLVDDVPLLLKSEDVKDVNRLLYVVFTSLPSNFGEFIKWVAEVRRQEDGRGNLSQEEKG 300

Query: 301 RLALKEEVLRQVQETLLFKHVVTFLSSVNSCCRSMSVLVHKNELPDIAEKVCCQGARILA 360
           RLA+KEEVL+QVQE  LFKHV  FLSS NSCC++MS+L  +N LP +A  +CCQGA ILA
Sbjct: 301 RLAVKEEVLKQVQEIGLFKHVAEFLSSANSCCKNMSILSQENYLPRVAASICCQGAEILA 360

Query: 361 GKFDSSERFYCRETCVKCLKANSDKPVTLVSGTVVNGSIEQEVDVLVPSSQIGGCGCGCG 420
           G+  +S  + C ETCV+CLK N DKP+TLVSGTVV+G  EQ +DVLVPSSQ+    CGCG
Sbjct: 361 GRSGTSGGYCCSETCVRCLKTNDDKPITLVSGTVVDGKTEQGLDVLVPSSQMKP-SCGCG 419

Query: 421 PSNCIGIYPAGNDILTVLILALPKETWSGIRDEKLSRQILGLVTTENLPTLLQEEVLHLR 480
           PS+ IG+YPAGND+LT L+LALP ETWSGI++EKL ++I  LV++ENLPTLLQEEVLHLR
Sbjct: 420 PSSHIGMYPAGNDVLTALLLALPPETWSGIKEEKLLQEIHALVSSENLPTLLQEEVLHLR 479

Query: 481 RQLHILRRCQENK 493
           RQL++L+RCQENK
Sbjct: 480 RQLYLLKRCQENK 492

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224129600\|ref\|XP_002320626.1\| predicted protein [Populus trichocarpa] gi\|222861399\|gb\|EEE98941.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|254935134\|gb\|ACT87974.1\| phytochelatin synthase isoform 3 [Sesbania rostrata] gi\|254935139\|gb\|ACT87977.1\| phytochelatin synthase isoform 3 [Sesbania rostrata]	Back alignment and taxonomy information

>gi\|225438071\|ref\|XP_002272237.1\| PREDICTED: glutathione gamma-glutamylcysteinyltransferase 1-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|373405317\|gb\|AEY68568.1\| phytochelatin synthase [Pyrus betulifolia] gi\|373405320\|gb\|AEY68569.1\| phytochelatin synthase [Pyrus betulifolia]	Back alignment and taxonomy information

>gi\|388518807\|gb\|AFK47465.1\| unknown [Lotus japonicus]	Back alignment and taxonomy information

>gi\|122208907\|sp\|Q2TSC7.1\|PCS1_LOTJA RecName: Full=Glutathione gamma-glutamylcysteinyltransferase 1; AltName: Full=LjPCS1-8R; AltName: Full=Phytochelatin synthase 1 gi\|33286859\|gb\|AAQ01752.1\| phytochelatin synthase [Lotus japonicus] gi\|50659121\|gb\|AAT80342.1\| phytochelatin synthase PCS1-8R [Lotus japonicus]	Back alignment and taxonomy information

>gi\|297744174\|emb\|CBI37144.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449445618\|ref\|XP_004140569.1\| PREDICTED: glutathione gamma-glutamylcysteinyltransferase 1-like [Cucumis sativus] gi\|449487365\|ref\|XP_004157590.1\| PREDICTED: glutathione gamma-glutamylcysteinyltransferase 1-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|351725998\|ref\|NP_001235576.1\| homo-phytochelatin synthase [Glycine max] gi\|18699092\|gb\|AAL78384.1\|AF411075_1 homo-phytochelatin synthase [Glycine max]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		522
TAIR\|locus:2024172		452	PCS2 "phytochelatin synthase 2	0.722	0.834	0.685	2.5e-162
TAIR\|locus:2172497		485	CAD1 "CADMIUM SENSITIVE 1" [Ar	0.764	0.822	0.688	3.3e-157
DICTYBASE\|DDB_G0291187		626	DDB_G0291187 "glutathione gamm	0.503	0.420	0.476	1.4e-69
POMBASE\|SPAC3H1.10		414	pcs2 "phytochelatin synthetase	0.498	0.628	0.417	9.9e-55
WB\|WBGene00003960		426	pcs-1 [Caenorhabditis elegans	0.425	0.521	0.460	1.5e-49

TAIR\|locus:2024172 PCS2 "phytochelatin synthase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1435 (510.2 bits), Expect = 2.5e-162, Sum P(2) = 2.5e-162
 Identities = 268/391 (68%), Positives = 325/391 (83%)

Query:     1 MAMAGLYRRMLPSPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLAS 60
             M+MA LYRR L SPPAIDFAS EGKQ+F EA+Q GTMEGF+ LISYFQTQSEPA+CGLAS
Sbjct:     1 MSMASLYRRSL-SPPAIDFASFEGKQIFNEALQKGTMEGFFGLISYFQTQSEPAFCGLAS 59

Query:    61 LSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKEKGISFGKLVCLAHCAGAKVEA 120
             LSMVLN+L+IDPGRKWKGPWRWFDESML+CCEPLE VK+KGISFGK+VCLAH +GAKVEA
Sbjct:    60 LSMVLNSLSIDPGRKWKGPWRWFDESMLECCEPLEIVKDKGISFGKVVCLAHSSGAKVEA 119

Query:   121 FRTNQSTIDDFRKYIIRCSASEDCHVISSYHRGAFKQTGTGHFSPIGGYHAGRDMALILD 180
             FRTNQSTIDDFRKY+++CS S++CH+IS+YHR   KQTGTGHFSPIGGY+A RDMALILD
Sbjct:   120 FRTNQSTIDDFRKYVVKCSTSDNCHMISTYHRQVLKQTGTGHFSPIGGYNAERDMALILD 179

Query:   181 VARFKYPPHWVPLTLLWEAMDRVDDATGQRRGFVLVSRPHREPGLLYTLSCKHENWVGIA 240
             VARFKYPPHWVPL LLW+AMD +D +TG+RRGF+L+SRPHREPGLLYTLSCK E+W+ IA
Sbjct:   180 VARFKYPPHWVPLKLLWDAMDSIDQSTGRRRGFMLISRPHREPGLLYTLSCKDESWISIA 239

Query:   241 KYLVDEVPKIVKSKDFKDFEEVLTVLFTSLPSNFGEFVKWVAEVRRREDGDHSLSQEEKG 300
             KYL ++VP++V S+     E +L V+F SLP+NF +F+KW+AE+RR ED + +LS EEK 
Sbjct:   240 KYLKEDVPRLVSSQHVDTIERILYVVFKSLPANFNQFIKWMAEIRRTEDVNQNLSSEEKS 299

Query:   301 RLALKEEVLRQVQETLLFKHVVTFLSSVNSCCRSMSVLVHKNELPDIAEKVCCQGARILA 360
             RL LK+E+L+QVQET LFKHV  FLSSV           +++ LP +A KV C G  IL+
Sbjct:   300 RLKLKQELLKQVQETKLFKHVDKFLSSV-----------YEDNLPYVAAKVYCDGDEILS 348

Query:   361 GKFDSSERFYCRETCVKCLKANSDKPVTLVS 391
             G ++S E   C+ETCVKC+K   ++ VT+V+
Sbjct:   349 G-YESDESC-CKETCVKCIKGLGEEKVTVVA 377

GO:0009507 "chloroplast" evidence=ISM

GO:0010038 "response to metal ion" evidence=IEA

GO:0016756 "glutathione gamma-glutamylcysteinyltransferase activity" evidence=IEA;ISS;IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0046938 "phytochelatin biosynthetic process" evidence=IEA;ISS;IDA

TAIR\|locus:2172497 CAD1 "CADMIUM SENSITIVE 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0291187 DDB_G0291187 "glutathione gamma-glutamylcysteinyltransferase" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

POMBASE\|SPAC3H1.10 pcs2 "phytochelatin synthetase" [Schizosaccharomyces pombe (taxid:4896)]	Back alignment and assigned GO terms

WB\|WBGene00003960 pcs-1 [Caenorhabditis elegans (taxid:6239)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2QKL5	PCS3_LOTJA	2, ., 3, ., 2, ., 1, 5	0.6100	0.8984	0.9791	N/A	no
Q9SWW5	PCS1_WHEAT	2, ., 3, ., 2, ., 1, 5	0.6007	0.9540	0.996	N/A	no
Q9S7Z3	PCS1_ARATH	2, ., 3, ., 2, ., 1, 5	0.6666	0.9137	0.9835	yes	no
Q2TSC7	PCS1_LOTJA	2, ., 3, ., 2, ., 1, 5	0.7044	0.9386	0.9780	N/A	no
Q2TE74	PCS2_LOTJA	2, ., 3, ., 2, ., 1, 5	0.5991	0.9003	0.9751	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.3.2	LOW CONFIDENCE prediction!
3rd Layer	2.3.2.15	0.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		522
pfam09328		264	pfam09328, Phytochelatin_C, Domain of unknown func	1e-139
pfam05023		208	pfam05023, Phytochelatin, Phytochelatin synthase	1e-124

>gnl\|CDD\|220182 pfam09328, Phytochelatin_C, Domain of unknown function (DUF1984)	Back alignment and domain information

 Score =  400 bits (1031), Expect = e-139
 Identities = 163/264 (61%), Positives = 205/264 (77%)

Query: 220 HREPGLLYTLSCKHENWVGIAKYLVDEVPKIVKSKDFKDFEEVLTVLFTSLPSNFGEFVK 279
            R P LLYTLSCKHE+W  +AKYL+++VP+++KS++ KD +EVL+V+F SLP+NFG+F+K
Sbjct: 1   QRAPSLLYTLSCKHESWRSMAKYLMEDVPRLLKSENLKDVQEVLSVVFKSLPANFGDFIK 60

Query: 280 WVAEVRRREDGDHSLSQEEKGRLALKEEVLRQVQETLLFKHVVTFLSSVNSCCRSMSVLV 339
           WVAEVRR+E+G+ SLS+EEK RLALKEEVL+QV+ET LFKHV  +LSS  SCC + S   
Sbjct: 61  WVAEVRRQEEGNSSLSKEEKERLALKEEVLQQVRETELFKHVTKWLSSEKSCCCNCSKSS 120

Query: 340 HKNELPDIAEKVCCQGARILAGKFDSSERFYCRETCVKCLKANSDKPVTLVSGTVVNGSI 399
            ++ LP+IA  VCCQGA IL GK  SS  F C+ETCVKC+KAN D P T+VSGTVV+   
Sbjct: 121 DEDSLPEIAASVCCQGAAILTGKLCSSNGFCCKETCVKCVKANGDGPTTVVSGTVVSDGS 180

Query: 400 EQEVDVLVPSSQIGGCGCGCGPSNCIGIYPAGNDILTVLILALPKETWSGIRDEKLSRQI 459
           EQ VD+LVP S      C  G S+ + ++P+ ND+LTVL+LALP  TWSGI+DE L  +I
Sbjct: 181 EQGVDMLVPKSPTKTSCCNSGSSSEVAMHPSSNDVLTVLLLALPPSTWSGIKDESLLAEI 240

Query: 460 LGLVTTENLPTLLQEEVLHLRRQL 483
             LV+TENLP LLQEEVLHLRRQL
Sbjct: 241 QRLVSTENLPDLLQEEVLHLRRQL 264

Members of this family of functionally uncharacterized domains are found at the C-terminus of plant phytochelatin synthases. Length = 264

>gnl\|CDD\|218387 pfam05023, Phytochelatin, Phytochelatin synthase	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		522
KOG0632		388	consensus Phytochelatin synthase [Inorganic ion tr	100.0
PF09328		264	Phytochelatin_C: Domain of unknown function (DUF19	100.0
PF05023		212	Phytochelatin: Phytochelatin synthase; InterPro: I	100.0
PF13529		144	Peptidase_C39_2: Peptidase_C39 like family; PDB: 3	98.67
cd02549		141	Peptidase_C39A A sub-family of peptidase family C3	98.26
PF03412		131	Peptidase_C39: Peptidase C39 family This is family	97.92
cd02259		122	Peptidase_C39_like Peptidase family C39 mostly con	97.69
cd02418		136	Peptidase_C39B A sub-family of peptidase family C3	97.68
PF14399		317	Transpep_BrtH: NlpC/p60-like transpeptidase	97.53
cd02424		129	Peptidase_C39E A sub-family of peptidase family C3	97.45
cd02423		129	Peptidase_C39G A sub-family of peptidase family C3	97.34
cd02420		125	Peptidase_C39D A sub-family of peptidase family C3	97.3
cd02425		126	Peptidase_C39F A sub-family of peptidase family C3	96.98
TIGR03796		710	NHPM_micro_ABC1 NHPM bacteriocin system ABC transp	96.84
cd02419		127	Peptidase_C39C A sub-family of peptidase family C3	96.7
TIGR01193		708	bacteriocin_ABC ABC-type bacteriocin transporter.	96.41
PF11814		207	DUF3335: Peptidase_C39 like family; InterPro: IPR0	96.05
PF09778		212	Guanylate_cyc_2: Guanylylate cyclase; InterPro: IP	95.83
cd02417		121	Peptidase_C39_likeA A sub-family of peptidase C39	91.23
COG2274		709	SunT ABC-type bacteriocin/lantibiotic exporters, c	90.81
cd02421		124	Peptidase_C39_likeD A sub-family of peptidase fami	89.74
TIGR03375		694	type_I_sec_LssB type I secretion system ATPase, Ls	88.98
TIGR01846		694	type_I_sec_HlyB type I secretion system ABC transp	86.35

>KOG0632 consensus Phytochelatin synthase [Inorganic ion transport and metabolism]	Back alignment and domain information

Probab=100.00  E-value=3.9e-122  Score=915.40  Aligned_cols=388  Identities=62%  Similarity=1.120  Sum_probs=368.3

Q ss_pred             CcccccccccCCCCCccccCChhhHHHHHHHHhcCCccccccccccccccCCCccccHHHHHHHHHhccCCCCCCcCCCc
Q 009934            1 MAMAGLYRRMLPSPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPW   80 (522)
Q Consensus         1 ~~~~sfYrR~LP~P~~I~fsS~EGk~Lf~eAl~~g~~e~ff~La~qF~TQ~npAyCGvASlamVLNAL~iDP~r~wkgpw   80 (522)
                      |+|.+||||.||. ++|+|+|.+||++|.|||+.|+||+||.|++||+||.+|||||+|||+||||||.|||+|.|||||
T Consensus         1 mt~ksfYrR~Lp~-~ci~FsS~lGK~iF~eALqkGtme~yF~Lasqf~TQ~EPAfCGL~tL~mvLNsL~vDPgr~WKgpW   79 (388)
T KOG0632|consen    1 MTMKSFYRRSLPP-PCIDFSSSLGKDIFNEALQKGTMEGYFSLASQFQTQSEPAFCGLATLSMVLNSLSVDPGRKWKGPW   79 (388)
T ss_pred             CchhhhhccCCCc-hhhhhhhHhhHHHHHHHHHhcchhHHHHHHHHHhccCCcchhhhHHHHHHHHhhccCCcccccCCc
Confidence            8999999999985 899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccchhccccchHHHhhcCCCHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHHHhcCCCceEEEEeecccccccCC
Q 009934           81 RWFDESMLDCCEPLEKVKEKGISFGKLVCLAHCAGAKVEAFRTNQSTIDDFRKYIIRCSASEDCHVISSYHRGAFKQTGT  160 (522)
Q Consensus        81 Rwf~E~mLdcc~~le~Vk~~GiTL~Ela~LA~c~G~~V~~yra~~~SldeFR~~v~~~~ss~d~~vIVNY~R~aLgQtG~  160 (522)
                      |||||+|||||+|++.|++.||+|++|.|||+|+|++|++++.++.++|+||..|+.|.+++|+++|.+|+|++|||||+
T Consensus        80 RwydesMLdCC~pLe~ikk~Gisl~~fsCLA~cnglk~~~~~~s~~t~d~FRk~vv~cstsen~~mi~sy~R~VlgQTGt  159 (388)
T KOG0632|consen   80 RWYDESMLDCCEPLEDIKKKGISLGKFSCLAHCNGLKVEAFRTSQSTIDDFRKDVVKCSTSENCHMISSYHRKVLGQTGT  159 (388)
T ss_pred             hhhhhHHHhhcccHHHHHhcCcchheeehhhhcCCceeEEEecCcchHHHHHHHHHhcccccceeeehHhHHHHhcCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccceeecCCCeEEEEecCCCCCCceeeehHHHHHhccccCCcCCceeeEEEEeCCCCCCCcceeeeccCCchhhHH
Q 009934          161 GHFSPIGGYHAGRDMALILDVARFKYPPHWVPLTLLWEAMDRVDDATGQRRGFVLVSRPHREPGLLYTLSCKHENWVGIA  240 (522)
Q Consensus       161 GHFSPIGGYh~~tD~VLILDVARfKYPP~WVpl~~L~eAM~tiD~~SgksRG~ilIs~~~~~p~~l~~l~~~~~~w~~~a  240 (522)
                      ||||||||||+++|++||||||||||||||||++.||+||..||.+||++||||+|++++++|+ +|+++|++++|..++
T Consensus       160 GHFSPiggy~e~~d~~LIlDVARFKYPphWV~Lkll~eam~siD~stg~pRG~~li~~~h~~~g-l~tl~lkk~sw~~i~  238 (388)
T KOG0632|consen  160 GHFSPIGGYNEERDMALILDVARFKYPPHWVPLKLLWEAMDSIDQSTGQPRGFMLISRPHREPG-LYTLSLKKESWINIA  238 (388)
T ss_pred             CccCcccccCcccCceEEeehhhccCCCcceeHHHHHHHhcchhhccCCCccceecccCCCCCc-eEEEEeccccHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHHhhhchhhccCCCCCHHHHHHHHHhcCCcchhchheeeeEEEeccCCCCCCCHHHHhhhhhHHHHHHHHhccchhHH
Q 009934          241 KYLVDEVPKIVKSKDFKDFEEVLTVLFTSLPSNFGEFVKWVAEVRRREDGDHSLSQEEKGRLALKEEVLRQVQETLLFKH  320 (522)
Q Consensus       241 ~~l~~~~p~l~~~~~~~~~~~v~~~~~~~lp~~~~~~ikw~~evr~~e~~~~~ls~ee~~rl~~k~~~l~qi~~t~l~~~  320 (522)
                      |||.+++|.            |.++.|.++|.+|+.||  ++|+|+.|+..++++.||     +|+.++           
T Consensus       239 k~lk~~v~~------------i~~~dfas~~~s~NQf~--~~~i~~~~d~~q~~~~E~-----fk~c~r-----------  288 (388)
T KOG0632|consen  239 KYLKEDVPR------------IKNVDFASLPLSFNQFI--IAEIRETEDSNQNLSFEE-----FKQCIR-----------  288 (388)
T ss_pred             HHHHHhhhh------------hhhhHHHhcchhHHHHH--HHHHHhhcCcccccCHHH-----HHHHHH-----------
Confidence            999999987            66778999999999999  899999999999999988     444333           


Q ss_pred             HHHhhhccccccccccccCCCCChHHHHHHhhchhhhhhhccCCCCCcceecccccceeeeCCCCCeEEEeeEEEeCCcc
Q 009934          321 VVTFLSSVNSCCRSMSVLVHKNELPDIAEKVCCQGARILAGKFDSSERFYCRETCVKCLKANSDKPVTLVSGTVVNGSIE  400 (522)
Q Consensus       321 v~~~~~s~~~~~~~~~~~~~~~~l~~~~~~vccqga~~l~g~~~~~~~~c~~~t~~~~~~~~~~~~~~~~s~~~~~~~~e  400 (522)
                                     |..++++   .+++.+||+|+++++|.  .+..|||++||++|.|.-++.-.|++          
T Consensus       289 ---------------st~~y~~---f~~h~~~c~~~e~~s~~--~~~~~~c~~~~~ac~kg~~e~~~t~~----------  338 (388)
T KOG0632|consen  289 ---------------STVTYED---FAAHKNCCTGVEILSGA--FSAEFCCPETCVACIKGVLEEIQTVV----------  338 (388)
T ss_pred             ---------------hhhhHHh---hhhhhcccccceeecCC--cccccccHHHHHHhhhchhhhhhhee----------
Confidence                           1122344   57889999999999998  67899999999999998777776666          


Q ss_pred             ceeeEeecCCCCCCCccCCCCCCcccccCCcchHHHHHHHhCCCCccCCCCChHHHHHHhhhccCCCCchhHHHHH
Q 009934          401 QEVDVLVPSSQIGGCGCGCGPSNCIGIYPAGNDILTVLILALPKETWSGIRDEKLSRQILGLVTTENLPTLLQEEV  476 (522)
Q Consensus       401 q~vd~l~p~~~~~~~~~~~~~~~~~~~~p~~~dvlt~lllal~~~tw~~i~~~~l~~e~~~lvs~~~lp~~l~~ev  476 (522)
                                                .+|.++||.|+|||||||+||+||+|..|..|+..+++.-+.|+++|.||
T Consensus       339 --------------------------aev~~s~v~taLllAlp~q~~~~~k~dsl~~~~k~~~~~~S~~t~~~~~~  388 (388)
T KOG0632|consen  339 --------------------------AEVEGSDVFTALLLALPPQTWSGIKDDSLTHEMKQLISMCSSPTLLQTEV  388 (388)
T ss_pred             --------------------------eecccchHHHHHHHhcCcccccccccHHHHHHHHHHHhhcccHhhhhccC
Confidence                                      38999999999999999999999999999999999999999999999985

>PF09328 Phytochelatin_C: Domain of unknown function (DUF1984); InterPro: IPR015407 This entry represents the C-terminal region of plant phytochelatin synthases (also known as glutathione gamma-glutamylcysteinyltransferase; 2	Back alignment and domain information

>PF05023 Phytochelatin: Phytochelatin synthase; InterPro: IPR007719 This entry represents plant phytochelatin synthases (also known as glutathione gamma-glutamylcysteinyltransferase; 2	Back alignment and domain information

>PF13529 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3ERV_A	Back alignment and domain information

>cd02549 Peptidase_C39A A sub-family of peptidase family C39	Back alignment and domain information

>PF03412 Peptidase_C39: Peptidase C39 family This is family C39 in the peptidase classification	Back alignment and domain information

>cd02259 Peptidase_C39_like Peptidase family C39 mostly contains bacteriocin-processing endopeptidases from bacteria	Back alignment and domain information

>cd02418 Peptidase_C39B A sub-family of peptidase family C39	Back alignment and domain information

>PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase	Back alignment and domain information

>cd02424 Peptidase_C39E A sub-family of peptidase family C39	Back alignment and domain information

>cd02423 Peptidase_C39G A sub-family of peptidase family C39	Back alignment and domain information

>cd02420 Peptidase_C39D A sub-family of peptidase family C39	Back alignment and domain information

>cd02425 Peptidase_C39F A sub-family of peptidase family C39	Back alignment and domain information

>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein	Back alignment and domain information

>cd02419 Peptidase_C39C A sub-family of peptidase family C39	Back alignment and domain information

>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter	Back alignment and domain information

>PF11814 DUF3335: Peptidase_C39 like family; InterPro: IPR021770 This family of proteins are functionally uncharacterised	Back alignment and domain information

>PF09778 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IPR018616 Members of this family of proteins catalyse the conversion of guanosine triphosphate (GTP) to 3',5'-cyclic guanosine monophosphate (cGMP) and pyrophosphate	Back alignment and domain information

>cd02417 Peptidase_C39_likeA A sub-family of peptidase C39 which contains Cyclolysin and Hemolysin processing peptidases	Back alignment and domain information

>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]	Back alignment and domain information

>cd02421 Peptidase_C39_likeD A sub-family of peptidase family C39	Back alignment and domain information

>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family	Back alignment and domain information

>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		522
2btw_B		254	Crystal Structure Of Alr0975 Length = 254		2e-30
2btw_A		254	Crystal Structure Of Alr0975 Length = 254		2e-30

>pdb|2BTW|B Chain B, Crystal Structure Of Alr0975 Length = 254

Back alignment and structure

Iteration: 1

Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 78/213 (36%), Positives = 110/213 (51%), Gaps = 10/213 (4%) Query: 13 SPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLASLSMVLNALAID- 71 SP I F S+EG++L L + + E F+ L F TQ AYCG+AS+ VLN+L I+ Sbjct: 41 SPNLIGFNSNEGEKLLLTS---RSREDFFPLSXQFVTQVNQAYCGVASIIXVLNSLGINA 97 Query: 72 PGRKWKGPWRWFDESMLDCCEPL------EKVKEKGISFGKLVCLAHCAGAKVEAFRTNQ 125 P P+R F + E E V ++G + +L L G KV+ + Sbjct: 98 PETAQYSPYRVFTQDNFFSNEKTKAVIAPEVVAKQGXTLDELGRLIASYGVKVKVNHASD 157 Query: 126 STIDDFRKYIIRCSASEDCHVISSYHRGAFKQTGTGHFSPIGGYHAGRDMALILDVARFK 185 + I+DFRK + + VI +Y R Q GH SP+ Y+ D LI DV+R+K Sbjct: 158 TNIEDFRKQVAENLKQDGNFVIVNYLRKEIGQERGGHISPLAAYNEQTDRFLIXDVSRYK 217 Query: 186 YPPHWVPLTLLWEAMDRVDDATGQRRGFVLVSR 218 YPP WV T LW+A + VD + + RGFV VS+ Sbjct: 218 YPPVWVKTTDLWKAXNTVDSVSQKTRGFVFVSK 250

PyMOL of 2btw

>pdb|2BTW|A Chain A, Crystal Structure Of Alr0975 Length = 254

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		522
2bu3_A		254	ALR0975 protein; phytochelatin synthase, PCS, acyl	1e-101
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06

>2bu3_A ALR0975 protein; phytochelatin synthase, PCS, acyl-enzyme intermedia nostoc, glutathione metabolism, cysteine protease, transfer; HET: 3GC; 1.4A {Anabaena SP} SCOP: d.3.1.14 PDB: 2btw_A* 2btw_B Length = 254	Back alignment and structure

 Score =  303 bits (777), Expect = e-101
 Identities = 80/226 (35%), Positives = 116/226 (51%), Gaps = 10/226 (4%)

Query: 4   AGLYRRMLPSPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLASLSM 63
             L + +  SP  I F S+EG++L L +    + E F+ L   F TQ   AYCG+AS+ M
Sbjct: 32  MKLEQTLTLSPNLIGFNSNEGEKLLLTS---RSREDFFPLSMQFVTQVNQAYCGVASIIM 88

Query: 64  VLNALAID-PGRKWKGPWRWFDESML------DCCEPLEKVKEKGISFGKLVCLAHCAGA 116
           VLN+L I+ P      P+R F +               E V  +G++  +L  L    G 
Sbjct: 89  VLNSLGINAPETAQYSPYRVFTQDNFFSNEKTKAVIAPEVVARQGMTLDELGRLIASYGV 148

Query: 117 KVEAFRTNQSTIDDFRKYIIRCSASEDCHVISSYHRGAFKQTGTGHFSPIGGYHAGRDMA 176
           KV+    + + I+DFRK +      +   VI +Y R    Q   GH SP+  Y+   D  
Sbjct: 149 KVKVNHASDTNIEDFRKQVAENLKQDGNFVIVNYLRKEIGQERGGHISPLAAYNEQTDRF 208

Query: 177 LILDVARFKYPPHWVPLTLLWEAMDRVDDATGQRRGFVLVSRPHRE 222
           LI+DV+R+KYPP WV  T LW+AM+ VD  + + RGFV VS+   +
Sbjct: 209 LIMDVSRYKYPPVWVKTTDLWKAMNTVDSVSQKTRGFVFVSKTQDD 254

PyMOL of 2bu3

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		522
2bu3_A		254	ALR0975 protein; phytochelatin synthase, PCS, acyl	100.0
3k8u_A		156	Putative ABC transporter, ATP-binding protein COMA	98.03
3b79_A		129	Toxin secretion ATP-binding protein; alpha-beta st	97.51
3zua_A		142	CLD, alpha-hemolysin translocation ATP-binding pro	97.38
3erv_A		236	Putative C39-like peptidase; structural genomics,	97.0

>2bu3_A ALR0975 protein; phytochelatin synthase, PCS, acyl-enzyme intermedia nostoc, glutathione metabolism, cysteine protease, transfer; HET: 3GC; 1.4A {Anabaena SP} SCOP: d.3.1.14 PDB: 2btw_A* 2btw_B	Back alignment and structure

Probab=100.00  E-value=6.2e-81  Score=613.11  Aligned_cols=216  Identities=37%  Similarity=0.614  Sum_probs=193.0

Q ss_pred             cccccccccCCCCCccccCChhhHHHHHHHHhcCCccccccccccccccCCCccccHHHHHHHHHhccCC-CCCCcCCCc
Q 009934            2 AMAGLYRRMLPSPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLASLSMVLNALAID-PGRKWKGPW   80 (522)
Q Consensus         2 ~~~sfYrR~LP~P~~I~fsS~EGk~Lf~eAl~~g~~e~ff~La~qF~TQ~npAyCGvASlamVLNAL~iD-P~r~wkgpw   80 (522)
                      +|++||+|+||+ ++|+|+|+||++||.+|   ++|++||+|++||+||+|++||||||++||||||++| |++.|||||
T Consensus        31 ~~~~~~~~~lp~-~~i~~~S~eG~~ll~~a---~~~~~ff~L~~qf~tQ~n~ayCGlASlaMVLNALgid~P~~~wk~pw  106 (254)
T 2bu3_A           31 HMKLEQTLTLSP-NLIGFNSNEGEKLLLTS---RSREDFFPLSMQFVTQVNQAYCGVASIIMVLNSLGINAPETAQYSPY  106 (254)
T ss_dssp             ---------CCT-TCEETTSHHHHHHHHHC---SBCTTHHHHHHHCCCCSSTTCHHHHHHHHHHHHTTCCC--------C
T ss_pred             hhhhccccCCCh-hhccccCHHHHHHHHhC---CCchhhhcccccccccCCCCchHHHHHHHHHHhhCCCCCCccccCce
Confidence            578999999995 89999999999999998   8999999999999999999999999999999999999 999999999


Q ss_pred             ccc-ccchhc-----cccchHHHhhcCCCHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHHHhcCCCceEEEEeeccc
Q 009934           81 RWF-DESMLD-----CCEPLEKVKEKGISFGKLVCLAHCAGAKVEAFRTNQSTIDDFRKYIIRCSASEDCHVISSYHRGA  154 (522)
Q Consensus        81 Rwf-~E~mLd-----cc~~le~Vk~~GiTL~Ela~LA~c~G~~V~~yra~~~SldeFR~~v~~~~ss~d~~vIVNY~R~a  154 (522)
                      ||| +|+||+     ||.+++.|+++||||+||+|||+|+|++|++|++++.++++||+.|++++++++++|||||+|++
T Consensus       107 r~~Tqe~mld~~~~~~~~~~~~v~~~GiTL~el~~La~c~G~~v~~y~a~~~sl~~fR~~v~~~~~~~~~~vvvny~R~~  186 (254)
T 2bu3_A          107 RVFTQDNFFSNEKTKAVIAPEVVARQGMTLDELGRLIASYGVKVKVNHASDTNIEDFRKQVAENLKQDGNFVIVNYLRKE  186 (254)
T ss_dssp             CCCCTTTTTC---CTTTSCHHHHHHHCCCHHHHHHHHHTTTCEEEEEEGGGSCHHHHHHHHHHHHTCTTEEEEEEEEGGG
T ss_pred             eeechHhHhcccccccccChhhhccCCcCHHHHHHHHHhCCceEEEEECCcCcHHHHHHHHHHHhCCCCcEEEEEeEccc
Confidence            999 689998     99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCccccccceeecCCCeEEEEecCCCCCCceeeehHHHHHhccccCCcCCceeeEEEEeCCCC
Q 009934          155 FKQTGTGHFSPIGGYHAGRDMALILDVARFKYPPHWVPLTLLWEAMDRVDDATGQRRGFVLVSRPHR  221 (522)
Q Consensus       155 LgQtG~GHFSPIGGYh~~tD~VLILDVARfKYPP~WVpl~~L~eAM~tiD~~SgksRG~ilIs~~~~  221 (522)
                      |||+|+||||||||||+++|+||||||||||||||||++++||+||+++|++||++||||+|++.++
T Consensus       187 l~q~G~GHfSPIggY~~~~D~vLIlDVar~kYpp~WV~~~~L~~Am~~~D~~s~~~RG~~li~~~~~  253 (254)
T 2bu3_A          187 IGQERGGHISPLAAYNEQTDRFLIMDVSRYKYPPVWVKTTDLWKAMNTVDSVSQKTRGFVFVSKTQD  253 (254)
T ss_dssp             GTCSSSEEEEEEEEEETTTTEEEECCSCTTTCCCEEEEHHHHHHHHSSEETTTTEECEEEEEEC---
T ss_pred             cCCCCCCceeceeeEcCCCCeEEEEecCccCCCCEeeeHHHHHHHHhcccccCCCcceEEEEecccC
Confidence            9999999999999999999999999999999999999999999999999999999999999998763

PyMOL of 2bu3

>3k8u_A Putative ABC transporter, ATP-binding protein COMA; cysteine protease, quorum-sensing, hydrolase; 1.90A {Streptococcus mutans}	Back alignment and structure

>3b79_A Toxin secretion ATP-binding protein; alpha-beta structure, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.37A {Vibrio parahaemolyticus rimd 2210633}	Back alignment and structure

>3zua_A CLD, alpha-hemolysin translocation ATP-binding protein; C39 peptidase-like domain, ABC transporter, haemolysin, HYDR heteronuclear; NMR {Escherichia coli}	Back alignment and structure

>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		522
d2bu3a1		210	d.3.1.14 (A:29-238) Primitive phytochelatin syntha	1e-102

>d2bu3a1 d.3.1.14 (A:29-238) Primitive phytochelatin synthase {Nostoc sp. pcc 7120 [TaxId: 103690]} Length = 210	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Phytochelatin synthase
domain: Primitive phytochelatin synthase
species: Nostoc sp. pcc 7120 [TaxId: 103690]

 Score =  303 bits (777), Expect = e-102
 Identities = 79/212 (37%), Positives = 111/212 (52%), Gaps = 10/212 (4%)

Query: 13  SPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLASLSMVLNALAID- 71
           SP  I F S+EG++L L +    + E F+ L   F TQ   AYCG+AS+ MVLN+L I+ 
Sbjct: 2   SPNLIGFNSNEGEKLLLTS---RSREDFFPLSMQFVTQVNQAYCGVASIIMVLNSLGINA 58

Query: 72  PGRKWKGPWRWFDESML------DCCEPLEKVKEKGISFGKLVCLAHCAGAKVEAFRTNQ 125
           P      P+R F +               E V  +G++  +L  L    G KV+    + 
Sbjct: 59  PETAQYSPYRVFTQDNFFSNEKTKAVIAPEVVARQGMTLDELGRLIASYGVKVKVNHASD 118

Query: 126 STIDDFRKYIIRCSASEDCHVISSYHRGAFKQTGTGHFSPIGGYHAGRDMALILDVARFK 185
           + I+DFRK +      +   VI +Y R    Q   GH SP+  Y+   D  LI+DV+R+K
Sbjct: 119 TNIEDFRKQVAENLKQDGNFVIVNYLRKEIGQERGGHISPLAAYNEQTDRFLIMDVSRYK 178

Query: 186 YPPHWVPLTLLWEAMDRVDDATGQRRGFVLVS 217
           YPP WV  T LW+AM+ VD  + + RGFV VS
Sbjct: 179 YPPVWVKTTDLWKAMNTVDSVSQKTRGFVFVS 210

PyMOL of d2bu3a1

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		522
d2bu3a1		210	Primitive phytochelatin synthase {Nostoc sp. pcc 7	100.0

>d2bu3a1 d.3.1.14 (A:29-238) Primitive phytochelatin synthase {Nostoc sp. pcc 7120 [TaxId: 103690]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Phytochelatin synthase
domain: Primitive phytochelatin synthase
species: Nostoc sp. pcc 7120 [TaxId: 103690]

Probab=100.00  E-value=1.5e-77  Score=572.91  Aligned_cols=203  Identities=38%  Similarity=0.652  Sum_probs=190.1

Q ss_pred             CCCCCccccCChhhHHHHHHHHhcCCccccccccccccccCCCccccHHHHHHHHHhccCC-CCCCcCCCccccccchh-
Q 009934           11 LPSPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLASLSMVLNALAID-PGRKWKGPWRWFDESML-   88 (522)
Q Consensus        11 LP~P~~I~fsS~EGk~Lf~eAl~~g~~e~ff~La~qF~TQ~npAyCGvASlamVLNAL~iD-P~r~wkgpwRwf~E~mL-   88 (522)
                      ||+ ++|+|+|+||++||.+|   ++|++||+|++||+||+||+||||||++||||||+|| |.+.|++|||||+|+++ 
T Consensus         1 lp~-~~i~~~S~eG~~ll~~~---~~~~~~~~L~~~f~tQ~~~ayCG~ASl~mvLNaL~id~P~~~~~~p~~~~tq~~l~   76 (210)
T d2bu3a1           1 LSP-NLIGFNSNEGEKLLLTS---RSREDFFPLSMQFVTQVNQAYCGVASIIMVLNSLGINAPETAQYSPYRVFTQDNFF   76 (210)
T ss_dssp             CCT-TCEETTSHHHHHHHHHC---SBCTTHHHHHHHCCCCSSTTCHHHHHHHHHHHHTTCCC--------CCCCCTTTTT
T ss_pred             CCc-ccccccCHHHHHHHHhC---ccchhHHHHHHHHhhccCCCeeHHHHHHHHHHhcCCCCCCccccCccccccccccc
Confidence            675 89999999999999886   8999999999999999999999999999999999999 99999999999999888 


Q ss_pred             -----ccccchHHHhhcCCCHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHHHhcCCCceEEEEeecccccccCCccc
Q 009934           89 -----DCCEPLEKVKEKGISFGKLVCLAHCAGAKVEAFRTNQSTIDDFRKYIIRCSASEDCHVISSYHRGAFKQTGTGHF  163 (522)
Q Consensus        89 -----dcc~~le~Vk~~GiTL~Ela~LA~c~G~~V~~yra~~~SldeFR~~v~~~~ss~d~~vIVNY~R~aLgQtG~GHF  163 (522)
                           +||.+.+.++++||||+||+|+|+|+|++|+++|+++.++++||++|++++++++++|||||+|+++||+|+|||
T Consensus        77 ~~~~~~~~~~~~~v~~~G~Tl~el~~la~~~g~~v~~~~~~~~s~d~FR~~v~~~~~~~~~~vivny~r~~l~q~G~GHf  156 (210)
T d2bu3a1          77 SNEKTKAVIAPEVVARQGMTLDELGRLIASYGVKVKVNHASDTNIEDFRKQVAENLKQDGNFVIVNYLRKEIGQERGGHI  156 (210)
T ss_dssp             C---CTTTSCHHHHHHHCCCHHHHHHHHHTTTCEEEEEEGGGSCHHHHHHHHHHHHTCTTEEEEEEEEGGGGTCSSSEEE
T ss_pred             cchhhhhccCHHHHHHcCCcHHHHHHHHHhCCCeeEEEeCCcccHHHHHHHHHHHhCCCCCEEEEEecCcccCcCCCcce
Confidence                 688999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccceeecCCCeEEEEecCCCCCCceeeehHHHHHhccccCCcCCceeeEEEEe
Q 009934          164 SPIGGYHAGRDMALILDVARFKYPPHWVPLTLLWEAMDRVDDATGQRRGFVLVS  217 (522)
Q Consensus       164 SPIGGYh~~tD~VLILDVARfKYPP~WVpl~~L~eAM~tiD~~SgksRG~ilIs  217 (522)
                      |||||||+++|+|||||||||||||||||+++||+||+++|++||++||||+||
T Consensus       157 SPI~gY~~~~d~vlilDvar~kypp~Wv~~~~L~~am~t~D~~t~~~RG~i~is  210 (210)
T d2bu3a1         157 SPLAAYNEQTDRFLIMDVSRYKYPPVWVKTTDLWKAMNTVDSVSQKTRGFVFVS  210 (210)
T ss_dssp             EEEEEEETTTTEEEECCSCTTTCCCEEEEHHHHHHHHSSEETTTTEECEEEEEE
T ss_pred             eeEEEEcCCCCEEEEEecCcccCCCeEeEHHHHHHHHhccccCCCCcceEEEeC
Confidence            999999999999999999999999999999999999999999999999999996

PyMOL of d2bu3a1