Citrus Sinensis ID: 009935

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520--
MAVDQKNKPNPNPEAEGRGNNNNKLPNFLLSVRLKYVKLGYHYIISNALYLLLVPILIISSAHLSTLSVQDIVQLWNQLRYNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPVHVPRVAAVDLKAS
ccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEccccccccHHHHHHHHccccccccEEEcccccccHHHHHHHHHHHHHHcccccEEEEEEEEEcccccccccccHHHHHHHHcccccEEEEEEcccccccccccccccEEEEcccccccccccEEEEEEccccEEEEEcccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEccccHHHHHHHHHHccccccccHHHHHHHHHcccccHHHHHHHHHHHHHccccccccEEEEEEEccHHHHHHHHHHHcccccccccccccccHHcccccccccccccccccc
cccccccccccccccccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEcccccccccHHHHHHHHcccccccEEEEcccccccHHHHHHHHHHHHHHHccccEEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHEEHHHHHHccccccccccEEEEEEcccccEEEEccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccHHHHHHHHHHHccccHHcccHccHEHHHcccccccHHHHHHHHHHHccccccccEEEEEEEcccccccHHHHHHHccccccccccccHHHHcccccccccEEEcccccc
mavdqknkpnpnpeaegrgnnnnklpnFLLSVRLKYVKLGYHYIISNALYLLLVPILIISSAHLSTLSVQDIVQLWNQLRYNLVTVTVCSSLMVFLGTLyfmsrprkvylvdfacykpeperqcTREIFMERSeqigcfseENLAFQKKILErsglgqhtyfpeavlrvppnpcmaeARNEAEMVMFGAIDELLSktgvkakdIGILVVNcslfcptpslsAMIVNHYKLrgnitsynlggmgcsagLISIDLAKQLLQVHPNSYALVVSMENITlnwyfgndrsmLVSNCLFRMGGAAILLsnrssdrrrsKYQLIHTVRthkgaddkcyncvfqreddtkrvGVSLSKDLMAVAGEALKTnittlgpivlpmsEQLLFFATLVAKKVFKMkikpyipdfKLAFEHFCIHAGGRAVLDELEKNLElsewhmepsrmtlyrfgntsssSLWYELAYSEAKgrmrkgdrtwqiafgsgfkCNSAVWQALRTinpakeknpwieeihefpvhvprvaavdlkas
mavdqknkpnpnpeaegrgnnnnklpNFLLSVRLKYVKLGYHYIISNALYLLLVPILIISSAHLSTLSVQDIVQLWNQLRYNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAIllsnrssdrrrsKYQLIHtvrthkgaddkcynCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEihefpvhvprVAAVDLKAS
MAVDQKNKPNPNPEAEGRGNNNNKLPNFLLSVRLKYVKLGYHYIISNALYLLLVPILIISSAHLSTLSVQDIVQLWNQLRYNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLsnrssdrrrsKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPVHVPRVAAVDLKAS
************************LPNFLLSVRLKYVKLGYHYIISNALYLLLVPILIISSAHLSTLSVQDIVQLWNQLRYNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIF*****************************HTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSN********KYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPVHVPRVAAV*****
**************************NFLLSVRLKYVKLGYHYIISNALYLLLVPILIISSAHLSTLSVQDIVQLWNQLRYNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAK***RKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPVHVPRVAAV*****
****************GRGNNNNKLPNFLLSVRLKYVKLGYHYIISNALYLLLVPILIISSAHLSTLSVQDIVQLWNQLRYNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPVHVPRVAAVDLKAS
***************EGRGNNNNKLPNFLLSVRLKYVKLGYHYIISNALYLLLVPILIISSAHLSTLSVQDIVQLWNQLRYNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPVHVPRVAAVD****
ooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MAVDQKNKPNPNPEAEGRGNNNNKLPNFLLSVRLKYVKLGYHYIISNALYLLLVPILIISSAHLSTLSVQDIVQLWNQLRYNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPVHVPRVAAVDLKAS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query522 2.2.26 [Sep-21-2011]
Q5XEP9528 3-ketoacyl-CoA synthase 1 yes no 0.948 0.937 0.771 0.0
O48780509 3-ketoacyl-CoA synthase 1 no no 0.975 1.0 0.736 0.0
Q9FG87529 3-ketoacyl-CoA synthase 1 no no 0.932 0.920 0.774 0.0
Q9LN49516 3-ketoacyl-CoA synthase 4 no no 0.927 0.937 0.678 0.0
Q9SIX1512 3-ketoacyl-CoA synthase 9 no no 0.969 0.988 0.638 0.0
Q9MAM3528 3-ketoacyl-CoA synthase 1 no no 0.934 0.924 0.615 0.0
Q9XF43497 3-ketoacyl-CoA synthase 6 no no 0.942 0.989 0.606 0.0
O65677487 Probable 3-ketoacyl-CoA s no no 0.900 0.965 0.614 1e-179
Q9C6L5492 3-ketoacyl-CoA synthase 5 no no 0.942 1.0 0.600 1e-177
Q570B4550 3-ketoacyl-CoA synthase 1 no no 0.925 0.878 0.558 1e-169
>sp|Q5XEP9|KCS17_ARATH 3-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana GN=KCS17 PE=2 SV=2 Back     alignment and function desciption
 Score =  826 bits (2134), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/504 (77%), Positives = 453/504 (89%), Gaps = 9/504 (1%)

Query: 22  NNKLPNFLLSVRLKYVKLGYHYIISNALYLLLVPILIISSAHLSTLSVQDIVQLWNQL-R 80
           N KLPNFLLSVRLKYVKLGYHY+ISNA+Y+L++P+ ++++   S+ S+ D+  L+N L +
Sbjct: 19  NKKLPNFLLSVRLKYVKLGYHYLISNAVYILILPVGLLAATS-SSFSLTDLTLLYNHLLK 77

Query: 81  YNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFS 140
           ++ ++ T+ ++L++FL TLYF +RPR+++L+DFACYKP+    CTRE FM+RS+++G F+
Sbjct: 78  FHFLSSTLFAALLIFLTTLYFTTRPRRIFLLDFACYKPDSSLICTRETFMDRSQRVGIFT 137

Query: 141 EENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVK 200
           E+NLAFQ+KILERSGLGQ TYFPEA+LRVPPNPCM+EAR EAE VMFGAID +L KTGV 
Sbjct: 138 EDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMSEARKEAETVMFGAIDAVLEKTGVN 197

Query: 201 AKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260
            KDIGILVVNCSLF PTPSLSAMIVN YKLRGN+ SYNLGGMGCSAGLISIDLAKQLLQV
Sbjct: 198 PKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNVLSYNLGGMGCSAGLISIDLAKQLLQV 257

Query: 261 HPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTV 320
            PNSYALVVS ENITLNWY GNDRSML+SNC+FRMGGAA+LLSNRSSDR RSKYQLIHTV
Sbjct: 258 QPNSYALVVSTENITLNWYLGNDRSMLLSNCIFRMGGAAVLLSNRSSDRCRSKYQLIHTV 317

Query: 321 RTHKGADDKCYNCVFQRE--DDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQL 378
           RTHKG+DD  +NCV+QRE  DD K++GVSLSK+LMA+AGEALKTNITTLGP+VLPMSEQL
Sbjct: 318 RTHKGSDDNAFNCVYQREDNDDNKQIGVSLSKNLMAIAGEALKTNITTLGPLVLPMSEQL 377

Query: 379 LFFATLVAKKVFKM-KIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRM 437
           LFFATLVA+KVF + KIKPYIPDFKLAFEHFCIHAGGRAVLDE+EKNL+LSEWHMEPSRM
Sbjct: 378 LFFATLVARKVFNVKKIKPYIPDFKLAFEHFCIHAGGRAVLDEIEKNLDLSEWHMEPSRM 437

Query: 438 TLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEK 497
           TL RFGNTSSSSLWYELAYSEAKGR+++GDRTWQIAFGSGFKCNSAVW+ALRTI+P+KEK
Sbjct: 438 TLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWRALRTIDPSKEK 497

Query: 498 ----NPWIEEIHEFPVHVPRVAAV 517
               NPWI+EIHEFPV VPR + V
Sbjct: 498 KKKTNPWIDEIHEFPVPVPRTSPV 521
Mediates the synthesis of VLCFAs from 22 to 26 carbons in length (e.g. C22, C24, C26).
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -
>sp|O48780|KCS11_ARATH 3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1 Back     alignment and function description
>sp|Q9FG87|KCS19_ARATH 3-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana GN=KCS19 PE=2 SV=1 Back     alignment and function description
>sp|Q9LN49|KCS4_ARATH 3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1 Back     alignment and function description
>sp|Q9SIX1|KCS9_ARATH 3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1 Back     alignment and function description
>sp|Q9MAM3|KCS1_ARATH 3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q9XF43|KCS6_ARATH 3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=1 SV=1 Back     alignment and function description
>sp|O65677|KCS2_ARATH Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana GN=KCS2 PE=2 SV=1 Back     alignment and function description
>sp|Q9C6L5|KCS5_ARATH 3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana GN=KCS5 PE=1 SV=1 Back     alignment and function description
>sp|Q570B4|KCS10_ARATH 3-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana GN=FDH PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query522
224102139520 beta-ketoacyl-coa synthase family protei 0.990 0.994 0.847 0.0
157673576529 beta-ketoacyl-CoA synthase [Gossypium hi 0.988 0.975 0.832 0.0
356535335517 PREDICTED: 3-ketoacyl-CoA synthase 11-li 0.961 0.970 0.856 0.0
356574783517 PREDICTED: 3-ketoacyl-CoA synthase 11-li 0.961 0.970 0.856 0.0
356500378521 PREDICTED: 3-ketoacyl-CoA synthase 11-li 0.978 0.980 0.826 0.0
225432862521 PREDICTED: 3-ketoacyl-CoA synthase 11 [V 0.948 0.950 0.874 0.0
255551981526 acyltransferase, putative [Ricinus commu 0.965 0.958 0.859 0.0
356535919517 PREDICTED: 3-ketoacyl-CoA synthase 11-li 0.982 0.992 0.815 0.0
358346983521 Beta-ketoacyl-CoA synthase [Medicago tru 0.948 0.950 0.826 0.0
224107935524 beta-ketoacyl-coa synthase family protei 0.990 0.986 0.833 0.0
>gi|224102139|ref|XP_002312562.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa] gi|222852382|gb|EEE89929.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  937 bits (2422), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/518 (84%), Positives = 477/518 (92%), Gaps = 1/518 (0%)

Query: 1   MAVDQ-KNKPNPNPEAEGRGNNNNKLPNFLLSVRLKYVKLGYHYIISNALYLLLVPILII 59
           MA DQ K KP P           N+LP FLLSVRLKYVKLGYHY+IS+A+YLLLVP+L I
Sbjct: 1   MAEDQSKQKPKPESVTVDAETKRNRLPYFLLSVRLKYVKLGYHYLISSAMYLLLVPLLFI 60

Query: 60  SSAHLSTLSVQDIVQLWNQLRYNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPE 119
           +SAHLSTL+++D VQLWN L++N V+VT+CS L+VFL TLYFMSRPRK++LVDFACYKPE
Sbjct: 61  ASAHLSTLTIRDFVQLWNHLKFNFVSVTLCSGLVVFLATLYFMSRPRKIFLVDFACYKPE 120

Query: 120 PERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEAR 179
           P R CTRE FME+S   GCFSEENLAFQKKILERSGLGQ+TYFPEAV+RV P PCM +AR
Sbjct: 121 PARMCTRETFMEKSAVAGCFSEENLAFQKKILERSGLGQNTYFPEAVMRVTPRPCMEDAR 180

Query: 180 NEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNL 239
            EAEMVMFGAIDELL+KTGVKAKDIG+L+VNCSLF PTPSLSAM++NHYKLRGNI SYNL
Sbjct: 181 KEAEMVMFGAIDELLAKTGVKAKDIGVLIVNCSLFNPTPSLSAMVINHYKLRGNILSYNL 240

Query: 240 GGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAA 299
           GGMGCSAGLISIDLAKQLLQV PNSYALV+SMENITLNWYFGNDRSMLVSNCLFRMGGAA
Sbjct: 241 GGMGCSAGLISIDLAKQLLQVLPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAA 300

Query: 300 ILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEA 359
           ILLSNR SDRRRSKYQLIHTVRTHKGADDKCYNCVFQ+EDDTKR+GVSLSKDLMAVAGEA
Sbjct: 301 ILLSNRPSDRRRSKYQLIHTVRTHKGADDKCYNCVFQKEDDTKRIGVSLSKDLMAVAGEA 360

Query: 360 LKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLD 419
           LKTNITTLGP+VLPMSEQLLFFATLV +K+FK+ IKPYIPDFKLAFEHFCIHAGGRAVLD
Sbjct: 361 LKTNITTLGPLVLPMSEQLLFFATLVGRKIFKLNIKPYIPDFKLAFEHFCIHAGGRAVLD 420

Query: 420 ELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFK 479
           ELEKNLELS+WHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGR+RKGDRTWQIAFGSGFK
Sbjct: 421 ELEKNLELSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIRKGDRTWQIAFGSGFK 480

Query: 480 CNSAVWQALRTINPAKEKNPWIEEIHEFPVHVPRVAAV 517
           CNSAVW ALRTINPAKEKNPWI+EI EFPVHVP+V ++
Sbjct: 481 CNSAVWYALRTINPAKEKNPWIDEIDEFPVHVPKVVSI 518

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|157673576|gb|ABV60087.1| beta-ketoacyl-CoA synthase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|356535335|ref|XP_003536202.1| PREDICTED: 3-ketoacyl-CoA synthase 11-like [Glycine max] Back     alignment and taxonomy information
>gi|356574783|ref|XP_003555524.1| PREDICTED: 3-ketoacyl-CoA synthase 11-like [Glycine max] Back     alignment and taxonomy information
>gi|356500378|ref|XP_003519009.1| PREDICTED: 3-ketoacyl-CoA synthase 11-like [Glycine max] Back     alignment and taxonomy information
>gi|225432862|ref|XP_002283935.1| PREDICTED: 3-ketoacyl-CoA synthase 11 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255551981|ref|XP_002517035.1| acyltransferase, putative [Ricinus communis] gi|223543670|gb|EEF45198.1| acyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356535919|ref|XP_003536489.1| PREDICTED: 3-ketoacyl-CoA synthase 11-like [Glycine max] Back     alignment and taxonomy information
>gi|358346983|ref|XP_003637542.1| Beta-ketoacyl-CoA synthase [Medicago truncatula] gi|355503477|gb|AES84680.1| Beta-ketoacyl-CoA synthase [Medicago truncatula] Back     alignment and taxonomy information
>gi|224107935|ref|XP_002314660.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa] gi|222863700|gb|EEF00831.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query522
TAIR|locus:2170837529 KCS20 "3-ketoacyl-CoA synthase 0.984 0.971 0.738 1.3e-210
TAIR|locus:2043849509 KCS11 "3-ketoacyl-CoA synthase 0.954 0.978 0.736 1.7e-208
TAIR|locus:2020215528 KCS2 "3-ketoacyl-CoA synthase 0.948 0.937 0.753 2.8e-208
TAIR|locus:2016397516 KCS4 "3-ketoacyl-CoA synthase 0.927 0.937 0.663 4.6e-176
TAIR|locus:2042684512 KCS9 "3-ketoacyl-CoA synthase 0.969 0.988 0.624 7.7e-174
TAIR|locus:2200955528 KCS1 "3-ketoacyl-CoA synthase 0.934 0.924 0.603 3.9e-163
TAIR|locus:2201262497 KCS6 "3-ketoacyl-CoA synthase 0.934 0.981 0.600 3.6e-160
TAIR|locus:2139579487 KCS17 "3-ketoacyl-CoA synthase 0.900 0.965 0.601 1.3e-157
TAIR|locus:2031260492 KCS5 "3-ketoacyl-CoA synthase 0.934 0.991 0.592 7e-157
TAIR|locus:2057706550 KCS10 "3-ketoacyl-CoA synthase 0.704 0.669 0.548 9.3e-152
TAIR|locus:2170837 KCS20 "3-ketoacyl-CoA synthase 20" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2036 (721.8 bits), Expect = 1.3e-210, P = 1.3e-210
 Identities = 385/521 (73%), Positives = 448/521 (85%)

Query:     4 DQKNKPNPNPEAEGRGNNN-NKLPNFLLSVRLKYVKLGYHYIISNALYLLLVPILIISSA 62
             +Q ++P P        N N N LPNFLLSVRLKYVKLGYHY+ISNALY+LL+P+L  + A
Sbjct:     6 NQPHRPVPVHVTNAEPNPNPNNLPNFLLSVRLKYVKLGYHYLISNALYILLLPLLAATIA 65

Query:    63 HLSTLSVQDIVQLWNQLRYNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPER 122
             +LS+ ++ D+  L+N LR++ ++ T+ ++L++ L T YF +RPR+V+L+DF+CYKP+P  
Sbjct:    66 NLSSFTINDLSLLYNTLRFHFLSATLATALLISLSTAYFTTRPRRVFLLDFSCYKPDPSL 125

Query:   123 QCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEA 182
              CTRE FM+RS+++G F+E+NLAFQ+KILERSGLGQ TYFPEA+LRVPPNPCM EAR EA
Sbjct:   126 ICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMEEARKEA 185

Query:   183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGM 242
             E VMFGAID +L KTGVK KDIGILVVNCSLF PTPSLSAMIVN YKLRGNI SYNLGGM
Sbjct:   186 ETVMFGAIDAVLEKTGVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNILSYNLGGM 245

Query:   243 GCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILL 302
             GCSAGLISIDLAKQ+LQV PNSYALVVS ENITLNWY GNDRSML+SNC+FRMGGAA+LL
Sbjct:   246 GCSAGLISIDLAKQMLQVQPNSYALVVSTENITLNWYLGNDRSMLLSNCIFRMGGAAVLL 305

Query:   303 XXXXXXXXXXKYQLIHTVRTHKGADDKCYNCVFQRED----DTKRVGVSLSKDLMAVAGE 358
                       KYQLIHTVRTHKGADD  + CV+QRED    +T ++GVSLSK+LMA+AGE
Sbjct:   306 SNRSSDRSRSKYQLIHTVRTHKGADDNAFGCVYQREDNNAEETGKIGVSLSKNLMAIAGE 365

Query:   359 ALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMK-IKPYIPDFKLAFEHFCIHAGGRAV 417
             ALKTNITTLGP+VLPMSEQLLFFATLVA+KVFK+K IKPYIPDFKLAFEHFCIHAGGRAV
Sbjct:   366 ALKTNITTLGPLVLPMSEQLLFFATLVARKVFKVKKIKPYIPDFKLAFEHFCIHAGGRAV 425

Query:   418 LDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSG 477
             LDE+EKNL+LSEWHMEPSRMTL RFGNTSSSSLWYELAYSEAKGR+++GDRTWQIAFGSG
Sbjct:   426 LDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSG 485

Query:   478 FKCNSAVWQALRTINPAKEK-NPWIEEIHEFPVHVPRVAAV 517
             FKCNSAVW+ALRTI+P  EK NPWI+EI +FPV VPR+  +
Sbjct:   486 FKCNSAVWKALRTIDPMDEKTNPWIDEIDDFPVQVPRITPI 526
GO:0003824 "catalytic activity" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0006633 "fatty acid biosynthetic process" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0008610 "lipid biosynthetic process" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA
GO:0009922 "fatty acid elongase activity" evidence=IDA
GO:0009409 "response to cold" evidence=IEP;RCA
GO:0009416 "response to light stimulus" evidence=IEP
GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA
GO:0042335 "cuticle development" evidence=RCA
TAIR|locus:2043849 KCS11 "3-ketoacyl-CoA synthase 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020215 KCS2 "3-ketoacyl-CoA synthase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016397 KCS4 "3-ketoacyl-CoA synthase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042684 KCS9 "3-ketoacyl-CoA synthase 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200955 KCS1 "3-ketoacyl-CoA synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201262 KCS6 "3-ketoacyl-CoA synthase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139579 KCS17 "3-ketoacyl-CoA synthase 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031260 KCS5 "3-ketoacyl-CoA synthase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057706 KCS10 "3-ketoacyl-CoA synthase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5XEP9KCS17_ARATH2, ., 3, ., 1, ., -0.77180.94820.9375yesno
Q9FG87KCS19_ARATH2, ., 3, ., 1, ., -0.77480.93290.9206nono
O48780KCS11_ARATH2, ., 3, ., 1, ., 1, 1, 90.73690.97501.0nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.10.983
3rd Layer2.3.1.1190.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query522
PLN02192511 PLN02192, PLN02192, 3-ketoacyl-CoA synthase 0.0
PLN02854521 PLN02854, PLN02854, 3-ketoacyl-CoA synthase 0.0
PLN02377502 PLN02377, PLN02377, 3-ketoacyl-CoA synthase 0.0
pfam08392290 pfam08392, FAE1_CUT1_RppA, FAE1/Type III polyketid 0.0
PLN02932478 PLN02932, PLN02932, 3-ketoacyl-CoA synthase 0.0
PLN00415466 PLN00415, PLN00415, 3-ketoacyl-CoA synthase 0.0
cd00831361 cd00831, CHS_like, Chalcone and stilbene synthases 1e-145
COG3424356 COG3424, BcsA, Predicted naringenin-chalcone synth 7e-25
cd00830320 cd00830, KAS_III, Ketoacyl-acyl carrier protein sy 2e-15
COG0332323 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] 6e-15
cd00827324 cd00827, init_cond_enzymes, "initiating" condensin 9e-13
TIGR00747318 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) 8e-12
PLN03169391 PLN03169, PLN03169, chalcone synthase family prote 2e-08
pfam0854190 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier- 3e-08
PLN03172393 PLN03172, PLN03172, chalcone synthase family prote 4e-08
PLN03171399 PLN03171, PLN03171, chalcone synthase-like protein 2e-07
PLN03170401 PLN03170, PLN03170, chalcone synthase; Provisional 4e-07
pfam02797151 pfam02797, Chal_sti_synt_C, Chalcone and stilbene 6e-07
PLN03173391 PLN03173, PLN03173, chalcone synthase; Provisional 2e-06
PLN03168389 PLN03168, PLN03168, chalcone synthase; Provisional 7e-05
cd00825332 cd00825, decarbox_cond_enzymes, decarboxylating co 0.001
PRK09352319 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protei 0.002
>gnl|CDD|215123 PLN02192, PLN02192, 3-ketoacyl-CoA synthase Back     alignment and domain information 
 Score =  927 bits (2397), Expect = 0.0
 Identities = 396/494 (80%), Positives = 453/494 (91%)

Query: 24  KLPNFLLSVRLKYVKLGYHYIISNALYLLLVPILIISSAHLSTLSVQDIVQLWNQLRYNL 83
           KLP+F  SV+LKYVKLGYHY+I++ +YL L P++++ +A LST S+QD+  LW  L++NL
Sbjct: 18  KLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVVVIAAQLSTFSIQDLHDLWEHLKFNL 77

Query: 84  VTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEEN 143
           ++V +CS+L+VFL TLYF++RPR VYLVDF+CYKP+  R+CTR+IFM+RS+  G F+EEN
Sbjct: 78  ISVILCSTLLVFLSTLYFLTRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEEN 137

Query: 144 LAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKD 203
           L FQ+KILERSGLG+ TY PEAVL VPPNPCMAEAR EAE VMFGAID+LL+KT VK KD
Sbjct: 138 LEFQRKILERSGLGESTYLPEAVLNVPPNPCMAEARKEAETVMFGAIDQLLAKTSVKPKD 197

Query: 204 IGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPN 263
           IGIL+VNCSLF PTPSLSAM++NHYKLRGNI SYNLGGMGCSAGLISIDLAK LLQVHPN
Sbjct: 198 IGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPN 257

Query: 264 SYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTH 323
           SYALV+SMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSN+ SDRRRSKYQL+HTVRTH
Sbjct: 258 SYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTH 317

Query: 324 KGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFAT 383
           KGADDKC+ CV Q ED   ++GVSLSKDLMAVAG+ALKTNITTLGP+VLPMSEQLLFFAT
Sbjct: 318 KGADDKCFACVTQEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFAT 377

Query: 384 LVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFG 443
           LV KK+FKMK+KPYIPDFKLAFEHFCIHAGGRAVLDELEKNL+LS+WHMEPSRMTLYRFG
Sbjct: 378 LVGKKLFKMKLKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFG 437

Query: 444 NTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEE 503
           NTSSSSLWYELAYSEAKGR++KGDRTWQIAFGSGFKCNSAVW+ALRT+NPAKEKNPW++E
Sbjct: 438 NTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNPAKEKNPWMDE 497

Query: 504 IHEFPVHVPRVAAV 517
           IHEFPV VP+V+ +
Sbjct: 498 IHEFPVDVPKVSTI 511

Length = 511
>gnl|CDD|215459 PLN02854, PLN02854, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|166018 PLN02377, PLN02377, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|116972 pfam08392, FAE1_CUT1_RppA, FAE1/Type III polyketide synthase-like protein Back     alignment and domain information
>gnl|CDD|178520 PLN02932, PLN02932, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|177808 PLN00415, PLN00415, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|238427 cd00831, CHS_like, Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>gnl|CDD|225958 COG3424, BcsA, Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>gnl|CDD|223409 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>gnl|CDD|238423 cd00827, init_cond_enzymes, "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes Back     alignment and domain information
>gnl|CDD|233113 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>gnl|CDD|215612 PLN03169, PLN03169, chalcone synthase family protein; Provisional Back     alignment and domain information
>gnl|CDD|117118 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Back     alignment and domain information
>gnl|CDD|178716 PLN03172, PLN03172, chalcone synthase family protein; Provisional Back     alignment and domain information
>gnl|CDD|178715 PLN03171, PLN03171, chalcone synthase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|178714 PLN03170, PLN03170, chalcone synthase; Provisional Back     alignment and domain information
>gnl|CDD|111670 pfam02797, Chal_sti_synt_C, Chalcone and stilbene synthases, C-terminal domain Back     alignment and domain information
>gnl|CDD|178717 PLN03173, PLN03173, chalcone synthase; Provisional Back     alignment and domain information
>gnl|CDD|178712 PLN03168, PLN03168, chalcone synthase; Provisional Back     alignment and domain information
>gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>gnl|CDD|236475 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 522
PLN02192511 3-ketoacyl-CoA synthase 100.0
PLN02854521 3-ketoacyl-CoA synthase 100.0
PLN02377502 3-ketoacyl-CoA synthase 100.0
PLN02932478 3-ketoacyl-CoA synthase 100.0
PLN00415466 3-ketoacyl-CoA synthase 100.0
PF08392290 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- 100.0
COG0332323 FabH 3-oxoacyl-[acyl-carrier-protein] 100.0
PLN03172393 chalcone synthase family protein; Provisional 100.0
cd00831361 CHS_like Chalcone and stilbene synthases; plant-sp 100.0
PLN03168389 chalcone synthase; Provisional 100.0
PLN03169391 chalcone synthase family protein; Provisional 100.0
PLN03173391 chalcone synthase; Provisional 100.0
PLN03171399 chalcone synthase-like protein; Provisional 100.0
PLN03170401 chalcone synthase; Provisional 100.0
COG3424356 BcsA Predicted naringenin-chalcone synthase [Secon 100.0
PRK05963326 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
PRK12880353 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PLN02326379 3-oxoacyl-[acyl-carrier-protein] synthase III 100.0
PRK07204329 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK12879325 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
CHL00203326 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr 100.0
PRK09258338 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK06840339 hypothetical protein; Validated 100.0
cd00830320 KAS_III Ketoacyl-acyl carrier protein synthase III 100.0
TIGR00747318 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III 100.0
PRK09352319 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK04262347 hypothetical protein; Provisional 100.0
PRK06816378 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
TIGR00748345 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase 100.0
PRK07515372 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
cd00827324 init_cond_enzymes "initiating" condensing enzymes 100.0
TIGR01835379 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt 100.0
PLN02577459 hydroxymethylglutaryl-CoA synthase 100.0
PF00195226 Chal_sti_synt_N: Chalcone and stilbene synthases, 99.97
COG3425377 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi 99.97
TIGR01833454 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth 99.97
cd00327254 cond_enzymes Condensing enzymes; Family of enzymes 99.95
cd00825332 decarbox_cond_enzymes decarboxylating condensing e 99.92
PF01154174 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s 99.78
PF0854190 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC 99.78
PF02797151 Chal_sti_synt_C: Chalcone and stilbene synthases, 99.77
KOG1393462 consensus Hydroxymethylglutaryl-CoA synthase [Lipi 99.69
PRK06147348 3-oxoacyl-(acyl carrier protein) synthase; Validat 99.67
TIGR02845327 spore_V_AD stage V sporulation protein AD. Bacillu 99.67
PRK08304337 stage V sporulation protein AD; Validated 99.55
cd00834406 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) 99.51
cd00751386 thiolase Thiolase are ubiquitous enzymes that cata 99.5
PRK09051394 beta-ketothiolase; Provisional 99.42
TIGR01930386 AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi 99.4
PRK05656393 acetyl-CoA acetyltransferase; Provisional 99.39
PRK06064389 acetyl-CoA acetyltransferase; Provisional 99.38
cd00829375 SCP-x_thiolase Thiolase domain associated with ste 99.37
PF0854580 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) 99.36
smart00825424 PKS_KS Beta-ketoacyl synthase. The structure of be 99.35
PRK09052399 acetyl-CoA acetyltransferase; Provisional 99.34
PRK08313386 acetyl-CoA acetyltransferase; Provisional 99.33
TIGR03150407 fabF beta-ketoacyl-acyl-carrier-protein synthase I 99.27
cd00828407 elong_cond_enzymes "elongating" condensing enzymes 99.27
PRK06501425 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.27
cd00833421 PKS polyketide synthases (PKSs) polymerize simple 99.25
PRK05790393 putative acyltransferase; Provisional 99.25
PRK06954397 acetyl-CoA acetyltransferase; Provisional 99.23
PRK06445394 acetyl-CoA acetyltransferase; Provisional 99.22
PRK12404334 stage V sporulation protein AD; Provisional 99.22
PRK07314411 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.18
PRK07661391 acetyl-CoA acetyltransferase; Provisional 99.18
PRK06025417 acetyl-CoA acetyltransferase; Provisional 99.15
PRK06333424 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.13
PRK06690361 acetyl-CoA acetyltransferase; Provisional 99.13
PLN02287452 3-ketoacyl-CoA thiolase 99.1
PRK08256391 lipid-transfer protein; Provisional 99.07
PLN02644394 acetyl-CoA C-acetyltransferase 99.05
PRK07108392 acetyl-CoA acetyltransferase; Provisional 99.04
PRK08439406 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.04
PRK06633392 acetyl-CoA acetyltransferase; Provisional 99.03
PRK08722414 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.02
PRK06205404 acetyl-CoA acetyltransferase; Provisional 99.02
PRK08235393 acetyl-CoA acetyltransferase; Provisional 99.01
PRK08242402 acetyl-CoA acetyltransferase; Validated 98.99
PRK06504390 acetyl-CoA acetyltransferase; Provisional 98.98
PRK07103410 polyketide beta-ketoacyl:acyl carrier protein synt 98.97
PRK06059399 lipid-transfer protein; Provisional 98.97
PRK12578385 acetyl-CoA acetyltransferase; Provisional 98.96
PRK08170426 acetyl-CoA acetyltransferase; Provisional 98.92
PRK07801382 acetyl-CoA acetyltransferase; Provisional 98.92
cd00826393 nondecarbox_cond_enzymes nondecarboxylating conden 98.9
PLN02787540 3-oxoacyl-[acyl-carrier-protein] synthase II 98.9
PRK09116405 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.88
cd00832399 CLF Chain-length factor (CLF) is a factor required 98.85
PRK05952381 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.85
PRK09185392 3-oxoacyl-(acyl carrier protein) synthase I; Revie 98.85
PRK06065392 acetyl-CoA acetyltransferase; Provisional 98.83
PLN02836437 3-oxoacyl-[acyl-carrier-protein] synthase 98.83
PTZ00050421 3-oxoacyl-acyl carrier protein synthase; Provision 98.82
PF00108264 Thiolase_N: Thiolase, N-terminal domain; InterPro: 98.82
PRK07967406 3-oxoacyl-(acyl carrier protein) synthase I; Revie 98.72
PRK07910418 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.72
PRK06158384 thiolase; Provisional 98.69
PRK13359400 beta-ketoadipyl CoA thiolase; Provisional 98.68
PRK07516389 acetyl-CoA acetyltransferase; Provisional 98.68
PRK08963428 fadI 3-ketoacyl-CoA thiolase; Reviewed 98.67
PRK07851406 acetyl-CoA acetyltransferase; Provisional 98.66
PRK06289403 acetyl-CoA acetyltransferase; Provisional 98.65
PF00109254 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal 98.62
PRK07850387 acetyl-CoA acetyltransferase; Provisional 98.62
PRK09050401 beta-ketoadipyl CoA thiolase; Validated 98.61
PRK08131401 acetyl-CoA acetyltransferase; Provisional 98.59
PRK06366388 acetyl-CoA acetyltransferase; Provisional 98.57
TIGR02430400 pcaF beta-ketoadipyl CoA thiolase. Members of this 98.57
TIGR02446430 FadI fatty oxidation complex, beta subunit FadI. T 98.54
PRK06157398 acetyl-CoA acetyltransferase; Validated 98.51
PRK14691342 3-oxoacyl-(acyl carrier protein) synthase II; Prov 98.5
PRK08947387 fadA 3-ketoacyl-CoA thiolase; Reviewed 98.49
PF07451329 SpoVAD: Stage V sporulation protein AD (SpoVAD); I 98.48
PTZ00455438 3-ketoacyl-CoA thiolase; Provisional 98.46
PRK06519398 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.46
PRK06365430 acetyl-CoA acetyltransferase; Provisional 98.45
TIGR02445385 fadA fatty oxidation complex, beta subunit FadA. T 98.4
TIGR02813 2582 omega_3_PfaA polyketide-type polyunsaturated fatty 98.39
PRK09268427 acetyl-CoA acetyltransferase; Provisional 98.34
PRK08142388 acetyl-CoA acetyltransferase; Provisional 98.11
PRK08257 498 acetyl-CoA acetyltransferase; Validated 98.02
COG0304412 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li 97.97
PRK07855386 lipid-transfer protein; Provisional 97.96
PRK06066385 acetyl-CoA acetyltransferase; Provisional 97.7
KOG1389435 consensus 3-oxoacyl CoA thiolase [Lipid transport 97.68
COG0183392 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis 97.52
COG3321 1061 Polyketide synthase modules and related proteins [ 97.45
PRK07937352 lipid-transfer protein; Provisional 97.34
KOG1390396 consensus Acetyl-CoA acetyltransferase [Lipid tran 97.23
KOG1406408 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 96.78
PF08540282 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A s 95.97
PF0854190 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC 94.78
KOG1391396 consensus Acetyl-CoA acetyltransferase [Lipid tran 94.66
KOG1394440 consensus 3-oxoacyl-(acyl-carrier-protein) synthas 94.66
PRK06025417 acetyl-CoA acetyltransferase; Provisional 94.15
TIGR00748345 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase 93.94
PRK06816378 3-oxoacyl-(acyl carrier protein) synthase III; Rev 93.68
PRK09258338 3-oxoacyl-(acyl carrier protein) synthase III; Rev 93.27
PRK05963326 3-oxoacyl-(acyl carrier protein) synthase II; Revi 93.24
cd00825332 decarbox_cond_enzymes decarboxylating condensing e 92.6
PRK12879325 3-oxoacyl-(acyl carrier protein) synthase III; Rev 92.43
PRK07204329 3-oxoacyl-(acyl carrier protein) synthase III; Rev 92.09
TIGR00747318 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III 92.06
PRK09352319 3-oxoacyl-(acyl carrier protein) synthase III; Rev 91.99
PRK04262347 hypothetical protein; Provisional 91.76
KOG1392465 consensus Acetyl-CoA acetyltransferase [Lipid tran 91.43
PLN02326379 3-oxoacyl-[acyl-carrier-protein] synthase III 91.41
PRK06840339 hypothetical protein; Validated 91.17
cd00327254 cond_enzymes Condensing enzymes; Family of enzymes 90.79
PF13723218 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina 90.43
CHL00203326 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr 90.36
PRK07515372 3-oxoacyl-(acyl carrier protein) synthase III; Rev 90.07
PRK09050401 beta-ketoadipyl CoA thiolase; Validated 89.99
cd00830320 KAS_III Ketoacyl-acyl carrier protein synthase III 89.75
PRK08242402 acetyl-CoA acetyltransferase; Validated 88.77
PRK13359400 beta-ketoadipyl CoA thiolase; Provisional 88.33
PRK08257498 acetyl-CoA acetyltransferase; Validated 88.27
TIGR02430400 pcaF beta-ketoadipyl CoA thiolase. Members of this 88.2
PRK07851406 acetyl-CoA acetyltransferase; Provisional 87.32
PRK06147348 3-oxoacyl-(acyl carrier protein) synthase; Validat 87.12
PRK05656393 acetyl-CoA acetyltransferase; Provisional 87.01
PRK07108392 acetyl-CoA acetyltransferase; Provisional 86.95
PRK06445394 acetyl-CoA acetyltransferase; Provisional 86.66
PRK08235393 acetyl-CoA acetyltransferase; Provisional 86.61
PRK07850387 acetyl-CoA acetyltransferase; Provisional 86.21
PRK09052399 acetyl-CoA acetyltransferase; Provisional 86.1
PLN02287452 3-ketoacyl-CoA thiolase 85.96
PRK06205404 acetyl-CoA acetyltransferase; Provisional 85.34
COG0332323 FabH 3-oxoacyl-[acyl-carrier-protein] 84.91
PRK09051394 beta-ketothiolase; Provisional 84.77
cd00831361 CHS_like Chalcone and stilbene synthases; plant-sp 84.41
COG3425377 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi 84.39
PRK08963428 fadI 3-ketoacyl-CoA thiolase; Reviewed 84.37
PRK06690361 acetyl-CoA acetyltransferase; Provisional 84.15
PF02803123 Thiolase_C: Thiolase, C-terminal domain; InterPro: 84.07
PRK12578385 acetyl-CoA acetyltransferase; Provisional 83.86
PLN03169391 chalcone synthase family protein; Provisional 83.4
PRK06954397 acetyl-CoA acetyltransferase; Provisional 83.36
cd00751386 thiolase Thiolase are ubiquitous enzymes that cata 82.87
PRK05790393 putative acyltransferase; Provisional 82.7
PRK06366388 acetyl-CoA acetyltransferase; Provisional 82.67
TIGR02445385 fadA fatty oxidation complex, beta subunit FadA. T 82.54
PRK07516389 acetyl-CoA acetyltransferase; Provisional 82.25
PRK08947387 fadA 3-ketoacyl-CoA thiolase; Reviewed 82.04
PRK12880353 3-oxoacyl-(acyl carrier protein) synthase III; Rev 82.02
PRK07661391 acetyl-CoA acetyltransferase; Provisional 80.78
>PLN02192 3-ketoacyl-CoA synthase Back     alignment and domain information 
Probab=100.00  E-value=1.4e-119  Score=965.25  Aligned_cols=500  Identities=79%  Similarity=1.330  Sum_probs=478.2

Q ss_pred             cccccCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 009935           17 GRGNNNNKLPNFLLSVRLKYVKLGYHYIISNALYLLLVPILIISSAHLSTLSVQDIVQLWNQLRYNLVTVTVCSSLMVFL   96 (522)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (522)
                      ..+++|++||||++|+|+||||+||||+++|+++++++|++++++.++.+++++|+..+|..++++++++++++++++++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (511)
T PLN02192         11 IEPSSSRKLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVVVIAAQLSTFSIQDLHDLWEHLKFNLISVILCSTLLVFL   90 (511)
T ss_pred             cccchhhhcchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33477999999999999999999999999999999999998888999999999999889988888888888888888888


Q ss_pred             HHHHHhcCCCceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHH
Q 009935           97 GTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMA  176 (522)
Q Consensus        97 ~~~~~~~~~~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma  176 (522)
                      +++|+++||++|||+||+||+|+++++++.+.++|+....|.|++++++||+|+++|||+|++||+|+..++.|+..+|+
T Consensus        91 ~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~~~~~~~  170 (511)
T PLN02192         91 STLYFLTRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVPPNPCMA  170 (511)
T ss_pred             HHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCChhhccCCCCccHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHH
Q 009935          177 EARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQ  256 (522)
Q Consensus       177 ~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~  256 (522)
                      ++|+|+++++++|+++||+++|++|+|||+||++||+++++||++++|+++||+++++.+|||+||||+||++||++|++
T Consensus       171 ~~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~  250 (511)
T PLN02192        171 EARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKH  250 (511)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999998999999999999999999999999


Q ss_pred             HHHcCCCCeEEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeee
Q 009935          257 LLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQ  336 (522)
Q Consensus       257 lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~  336 (522)
                      +|+++++++||||++|.+|.+||.++||+++++|++|||||||+||++++.++++++|+|.+.++++.+++++.|+|+++
T Consensus       251 lL~a~~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~~dd~~~~~v~~  330 (511)
T PLN02192        251 LLQVHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVTQ  330 (511)
T ss_pred             HHHcCCCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEecCChhhccceec
Confidence            99999999999999999999999999999999999999999999999976555567899999999999999999999999


Q ss_pred             ccCCCcccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChH
Q 009935          337 REDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRA  416 (522)
Q Consensus       337 ~~d~~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~  416 (522)
                      ++|++|+.|+.|+||+|.+++++++.|++++||.++|.+|+.++++.+.++++++.+++.|+|+++.+|||||+||+|++
T Consensus       331 ~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~~Idhf~iHqggr~  410 (511)
T PLN02192        331 EEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAFEHFCIHAGGRA  410 (511)
T ss_pred             ccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHHhhceEeeccCCHH
Confidence            99999999999999999999999999999999999999999988888899999998888889999999999999999999


Q ss_pred             HHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheeeEEeccCCCCCC
Q 009935          417 VLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKE  496 (522)
Q Consensus       417 vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~~~~~~~~  496 (522)
                      +++.++++||++++++++|+++++|||||||||+||+|++++++|++++||+|||+|||+||+|+++||||+|++++..+
T Consensus       411 IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaFGsGf~~~sav~~~~~~~~~~~~  490 (511)
T PLN02192        411 VLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNPAKE  490 (511)
T ss_pred             HHHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEEcchHhhhhhheeeecccCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999987542


Q ss_pred             CCCcccccccCCCCCCcccc
Q 009935          497 KNPWIEEIHEFPVHVPRVAA  516 (522)
Q Consensus       497 ~~~w~~~~~~~p~~~~~~~~  516 (522)
                      .|||+||||+|||++|.++.
T Consensus       491 ~~~w~~~i~~yp~~~~~~~~  510 (511)
T PLN02192        491 KNPWMDEIHEFPVDVPKVST  510 (511)
T ss_pred             CCCchhhHHhCCCCCCCCCC
Confidence            49999999999999998754

>PLN02854 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN02377 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN02932 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN00415 3-ketoacyl-CoA synthase Back     alignment and domain information
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species Back     alignment and domain information
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>PLN03172 chalcone synthase family protein; Provisional Back     alignment and domain information
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>PLN03168 chalcone synthase; Provisional Back     alignment and domain information
>PLN03169 chalcone synthase family protein; Provisional Back     alignment and domain information
>PLN03173 chalcone synthase; Provisional Back     alignment and domain information
>PLN03171 chalcone synthase-like protein; Provisional Back     alignment and domain information
>PLN03170 chalcone synthase; Provisional Back     alignment and domain information
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional Back     alignment and domain information
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK06840 hypothetical protein; Validated Back     alignment and domain information
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK04262 hypothetical protein; Provisional Back     alignment and domain information
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative Back     alignment and domain information
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes Back     alignment and domain information
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade Back     alignment and domain information
>PLN02577 hydroxymethylglutaryl-CoA synthase Back     alignment and domain information
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 Back     alignment and domain information
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] Back     alignment and domain information
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade Back     alignment and domain information
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase Back     alignment and domain information
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 Back     alignment and domain information
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 Back     alignment and domain information
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] Back     alignment and domain information
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated Back     alignment and domain information
>TIGR02845 spore_V_AD stage V sporulation protein AD Back     alignment and domain information
>PRK08304 stage V sporulation protein AD; Validated Back     alignment and domain information
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II Back     alignment and domain information
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>PRK09051 beta-ketothiolase; Provisional Back     alignment and domain information
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases Back     alignment and domain information
>PRK05656 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06064 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism Back     alignment and domain information
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways Back     alignment and domain information
>smart00825 PKS_KS Beta-ketoacyl synthase Back     alignment and domain information
>PRK09052 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08313 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II Back     alignment and domain information
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases Back     alignment and domain information
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations Back     alignment and domain information
>PRK05790 putative acyltransferase; Provisional Back     alignment and domain information
>PRK06954 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06445 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK12404 stage V sporulation protein AD; Provisional Back     alignment and domain information
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK07661 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06025 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06690 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN02287 3-ketoacyl-CoA thiolase Back     alignment and domain information
>PRK08256 lipid-transfer protein; Provisional Back     alignment and domain information
>PLN02644 acetyl-CoA C-acetyltransferase Back     alignment and domain information
>PRK07108 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06633 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06205 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08235 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08242 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK06504 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated Back     alignment and domain information
>PRK06059 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK12578 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08170 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07801 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II Back     alignment and domain information
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria Back     alignment and domain information
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>PRK06065 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase Back     alignment and domain information
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional Back     alignment and domain information
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06158 thiolase; Provisional Back     alignment and domain information
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional Back     alignment and domain information
>PRK07516 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>PRK07851 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06289 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 Back     alignment and domain information
>PRK07850 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09050 beta-ketoadipyl CoA thiolase; Validated Back     alignment and domain information
>PRK08131 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06366 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase Back     alignment and domain information
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI Back     alignment and domain information
>PRK06157 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional Back     alignment and domain information
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long Back     alignment and domain information
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional Back     alignment and domain information
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06365 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA Back     alignment and domain information
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>PRK09268 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08142 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08257 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK07855 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK06066 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] Back     alignment and domain information
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] Back     alignment and domain information
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK07937 lipid-transfer protein; Provisional Back     alignment and domain information
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] Back     alignment and domain information
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase Back     alignment and domain information
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 Back     alignment and domain information
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PRK06025 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative Back     alignment and domain information
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK04262 hypothetical protein; Provisional Back     alignment and domain information
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>PRK06840 hypothetical protein; Validated Back     alignment and domain information
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain Back     alignment and domain information
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional Back     alignment and domain information
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK09050 beta-ketoadipyl CoA thiolase; Validated Back     alignment and domain information
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>PRK08242 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional Back     alignment and domain information
>PRK08257 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase Back     alignment and domain information
>PRK07851 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated Back     alignment and domain information
>PRK05656 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07108 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06445 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08235 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07850 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09052 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN02287 3-ketoacyl-CoA thiolase Back     alignment and domain information
>PRK06205 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>PRK09051 beta-ketothiolase; Provisional Back     alignment and domain information
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] Back     alignment and domain information
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>PRK06690 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>PRK12578 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN03169 chalcone synthase family protein; Provisional Back     alignment and domain information
>PRK06954 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>PRK05790 putative acyltransferase; Provisional Back     alignment and domain information
>PRK06366 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA Back     alignment and domain information
>PRK07516 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK07661 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query522
1u0m_A382 Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen 5e-10
1tee_A393 Crystal Structure Of C205f Mutant Of Pks18 From Myc 1e-09
1ted_A393 Crystal Structure Of A Type Iii Polyketide Synthase 1e-09
1z1e_A390 Crystal Structure Of Stilbene Synthase From Arachis 3e-09
1qlv_A402 Pyrone Synthase (Pys) From Gerbera Hybrida Length = 1e-07
3ale_A416 A Type Iii Polyketide Synthase That Produces Diaryl 4e-07
1cgz_A389 Chalcone Synthase From Alfalfa Complexed With Resve 9e-07
3oit_A387 Crystal Structure Of Curcuminoid Synthase Cus From 2e-06
1u0v_A393 An Aldol Switch Discovered In Stilbene Synthases Me 2e-06
3tsy_A979 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr 2e-06
2h84_A374 Crystal Structure Of The C-terminal Type Iii Polyke 2e-06
1i89_A389 Chalcone Synthase (G256l) Length = 389 4e-06
1i88_A389 Chalcone Synthase (G256v) Length = 389 8e-06
1i86_A389 Chalcone Synthase, G256a Mutant Length = 389 1e-05
1cml_A389 Chalcone Synthase From Alfalfa Complexed With Malon 1e-05
1chw_A389 Chalcone Synthase From Alfalfa Complexed With Hexan 1e-05
1i8b_A389 Chalcone Synthase (g256f) Length = 389 1e-05
1bq6_A388 Chalcone Synthase From Alfalfa With Coenzyme A Leng 1e-05
1bi5_A389 Chalcone Synthase From Alfalfa Length = 389 2e-05
1u0u_A397 An Aldol Switch Discovered In Stilbene Synthases Me 3e-05
1xes_A413 Crystal Structure Of Stilbene Synthase From Pinus S 3e-05
3awj_A402 Crystal Structure Of The Huperzia Serrata Polyketid 7e-05
1d6i_A388 Chalcone Synthase (H303q Mutant) Length = 388 1e-04
1d6h_A387 Chalone Synthase (N336a Mutant Complexed With Coa) 1e-04
1jwx_A389 Chalcone Synthase--F215s Mutant Length = 389 2e-04
2p0u_A413 Crystal Structure Of Marchantia Polymorpha Stilbene 3e-04
2d3m_A406 Pentaketide Chromone Synthase Complexed With Coenzy 5e-04
2d51_A406 Pentaketide Chromone Synthase (M207g Mutant) Length 5e-04
>pdb|1U0M|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Synthase (Thns) From Streptomyces Coelicolor A3(2): A Bacterial Type Iii Polyketide Synthase (Pks) Provides Insights Into Enzymatic Control Of Reactive Polyketide Intermediates Length = 382 Back     alignment and structure 
Iteration: 1

 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 129/328 (39%), Gaps = 77/328 (23%)
Query: 181 EAEMVMFGAIDELLSKTGVKAKDIGILV-VNCSLFCPTPSLSAMIVNHYKLRGNITSYNL 239
           EA+  +   I   L    + A DI +++ V+C+ F   PSL+A ++N            +
Sbjct: 83  EAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFM-MPSLTAWLINEMGFDSTTRQIPI 141
Query: 240 GGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSM--LVSNCLFRMGG 297
             +GC+AG  +I+ A      +P + AL+V+ E  +L  Y   D  +  L+ N LF  G 
Sbjct: 142 AQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSL-CYQPTDLGVGSLLCNGLFGDGI 200
Query: 298 AAILLXXXXXXXXXXKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAG 357
           AA +                  VR   G                   GV L ++      
Sbjct: 201 AAAV------------------VRGRGG------------------TGVRLERN------ 218
Query: 358 EALKTNITTLGPIVLPMSEQLLF-------FATLVAKKVFKMKIKPYIPDFK-LAFEH-- 407
                     G  ++P +E  +        F  L+ K+V    ++P  P  K LA EH  
Sbjct: 219 ----------GSYLIPKTEDWIMYDVKATGFHFLLDKRV-PATMEPLAPALKELAGEHGW 267
Query: 408 -------FCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAK 460
                  + +HAGG  +LD+L   LE+       SR TL  +GN +S+ +   L     +
Sbjct: 268 DASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDE 327
Query: 461 GRMRKGDRTWQIAFGSGFKCNSAV--WQ 486
           G + +G R     FG G     ++  WQ
Sbjct: 328 GGVEEGARGLLAGFGPGITAEMSLGCWQ 355
>pdb|1TEE|A Chain A, Crystal Structure Of C205f Mutant Of Pks18 From Mycobacterium Tuberculosis Length = 393 Back     alignment and structure
>pdb|1TED|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pks18 From Mycobacterium Tuberculosis Length = 393 Back     alignment and structure
>pdb|1Z1E|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis Hypogaea Length = 390 Back     alignment and structure
>pdb|1QLV|A Chain A, Pyrone Synthase (Pys) From Gerbera Hybrida Length = 402 Back     alignment and structure
>pdb|3ALE|A Chain A, A Type Iii Polyketide Synthase That Produces Diarylheptanoid Length = 416 Back     alignment and structure
>pdb|1CGZ|A Chain A, Chalcone Synthase From Alfalfa Complexed With Resveratrol Length = 389 Back     alignment and structure
>pdb|3OIT|A Chain A, Crystal Structure Of Curcuminoid Synthase Cus From Oryza Sativa Length = 387 Back     alignment and structure
>pdb|1U0V|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates Cyclization Of Specificity Of Type Iii Polyketide Synthases: 18xchs Structure Length = 393 Back     alignment and structure
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 Back     alignment and structure
>pdb|2H84|A Chain A, Crystal Structure Of The C-terminal Type Iii Polyketide Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks Hybrid From Dictyostelium) Length = 374 Back     alignment and structure
>pdb|1I89|A Chain A, Chalcone Synthase (G256l) Length = 389 Back     alignment and structure
>pdb|1I88|A Chain A, Chalcone Synthase (G256v) Length = 389 Back     alignment and structure
>pdb|1I86|A Chain A, Chalcone Synthase, G256a Mutant Length = 389 Back     alignment and structure
>pdb|1CML|A Chain A, Chalcone Synthase From Alfalfa Complexed With Malonyl-Coa Length = 389 Back     alignment and structure
>pdb|1CHW|A Chain A, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa Length = 389 Back     alignment and structure
>pdb|1I8B|A Chain A, Chalcone Synthase (g256f) Length = 389 Back     alignment and structure
>pdb|1BQ6|A Chain A, Chalcone Synthase From Alfalfa With Coenzyme A Length = 388 Back     alignment and structure
>pdb|1BI5|A Chain A, Chalcone Synthase From Alfalfa Length = 389 Back     alignment and structure
>pdb|1U0U|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates Cyclization Specificity Of Type Iii Polyketide Synthases: Pine Stilbene Synthase Structure Length = 397 Back     alignment and structure
>pdb|1XES|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus Sylvestris Length = 413 Back     alignment and structure
>pdb|3AWJ|A Chain A, Crystal Structure Of The Huperzia Serrata Polyketide Synthase 1 Complexed With Coa-Sh Length = 402 Back     alignment and structure
>pdb|1D6I|A Chain A, Chalcone Synthase (H303q Mutant) Length = 388 Back     alignment and structure
>pdb|1D6H|A Chain A, Chalone Synthase (N336a Mutant Complexed With Coa) Length = 387 Back     alignment and structure
>pdb|1JWX|A Chain A, Chalcone Synthase--F215s Mutant Length = 389 Back     alignment and structure
>pdb|2P0U|A Chain A, Crystal Structure Of Marchantia Polymorpha Stilbenecarboxylate Synthase 2 (Stcs2) Length = 413 Back     alignment and structure
>pdb|2D3M|A Chain A, Pentaketide Chromone Synthase Complexed With Coenzyme A Length = 406 Back     alignment and structure
>pdb|2D51|A Chain A, Pentaketide Chromone Synthase (M207g Mutant) Length = 406 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query522
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 1e-122
3oit_A387 OS07G0271500 protein; type III polyketide synthase 1e-114
3awk_A402 Chalcone synthase-like polyketide synthase; type I 5e-83
1i88_A389 CHS2, chalcone synthase 2; polyketide synthase, tr 1e-80
3a5r_A387 Benzalacetone synthase; chalcone synthase, type II 2e-80
3v7i_A413 Putative polyketide synthase; type III polyketide 5e-76
2p0u_A413 Stilbenecarboxylate synthase 2; polyketide synthas 9e-68
1xes_A413 Dihydropinosylvin synthase; native structure, tran 1e-66
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 4e-66
1ee0_A402 2-pyrone synthase; polyketide synthase, thiolase f 1e-51
3e1h_A465 PKSIIINC, putative uncharacterized protein; resorc 2e-50
3euo_A379 Type III pentaketide synthase; alpha helix, acyltr 6e-48
1u0m_A382 Putative polyketide synthase; type III polyketide 2e-37
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 8e-35
3ov2_A393 Curcumin synthase; type III polyketide synthase, t 2e-30
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 3e-09
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 5e-08
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 8e-07
2p8u_A478 Hydroxymethylglutaryl-COA synthase, cytoplasmic; h 9e-07
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 2e-06
1xpm_A396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 2e-06
2v4w_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 5e-06
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 9e-06
3sqz_A425 Putative hydroxymethylglutaryl-COA synthase; thiol 2e-05
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 3e-05
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 5e-05
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 4e-04
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 6e-04
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 6e-04
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 6e-04
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 8e-04
2f82_A450 HMG-COA synthase; HMGS1, transferase; 2.10A {Brass 9e-04
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Length = 374 Back     alignment and structure
 Score =  361 bits (929), Expect = e-122
 Identities = 67/378 (17%), Positives = 136/378 (35%), Gaps = 37/378 (9%)

Query: 120 PERQCTREIFMERSEQIGCFSEENLAFQKKILERSG-----LGQHTYFPEAVLRVPPNPC 174
           P    +++   +          E     K+I E+S      L +    PE  ++      
Sbjct: 24  PGEPISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTRHLVRDYTKPENSIKFRHLET 83

Query: 175 MAEARN----EAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKL 230
           + +  N        +   A    L   G    DI  +V   S     P ++  +++   L
Sbjct: 84  ITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGL 143

Query: 231 RGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSN 290
             ++   +L  MGC AGL S+  A  L +  P +  LVV  E  +L++   +    +V++
Sbjct: 144 NKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHFSNTDGGDQMVAS 203

Query: 291 CLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSK 350
            +F  G AA ++           Y+++ ++       +     V+  E +     + L  
Sbjct: 204 SIFADGSAAYIIGCNPRIEETPLYEVMCSINRSFPNTENA--MVWDLEKE--GWNLGLDA 259

Query: 351 DLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCI 410
            +  V G  ++  +                  TL+ K   +        D       F I
Sbjct: 260 SIPIVIGSGIEAFVD-----------------TLLDKAKLQTSTAISAKDC-----EFLI 297

Query: 411 HAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTW 470
           H GG+++L  +E +L +     + +    + +GN SS+S+ + + ++           + 
Sbjct: 298 HTGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSK--SLPTYSI 355

Query: 471 QIAFGSGFKCNSAVWQAL 488
            +AFG G        + +
Sbjct: 356 SLAFGPGLAFEGCFLKNV 373
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Length = 387 Back     alignment and structure
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Length = 387 Back     alignment and structure
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Length = 413 Back     alignment and structure
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Length = 413 Back     alignment and structure
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Length = 465 Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Length = 382 Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Length = 393 Back     alignment and structure
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Length = 393 Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Length = 357 Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Length = 392 Back     alignment and structure
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} Length = 478 Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Length = 365 Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Length = 396 Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Length = 322 Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Length = 345 Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Length = 359 Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Length = 309 Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Length = 313 Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Length = 317 Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Length = 331 Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Length = 339 Back     alignment and structure
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* Length = 450 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query522
4ewp_A350 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans 100.0
3e1h_A465 PKSIIINC, putative uncharacterized protein; resorc 100.0
3il6_A321 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
3ov2_A393 Curcumin synthase; type III polyketide synthase, t 100.0
3euo_A379 Type III pentaketide synthase; alpha helix, acyltr 100.0
3oit_A387 OS07G0271500 protein; type III polyketide synthase 100.0
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 100.0
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 100.0
3v7i_A413 Putative polyketide synthase; type III polyketide 100.0
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 100.0
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 100.0
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 100.0
1i88_A389 CHS2, chalcone synthase 2; polyketide synthase, tr 100.0
2p0u_A413 Stilbenecarboxylate synthase 2; polyketide synthas 100.0
3awk_A402 Chalcone synthase-like polyketide synthase; type I 100.0
3a5r_A387 Benzalacetone synthase; chalcone synthase, type II 100.0
1xes_A413 Dihydropinosylvin synthase; native structure, tran 100.0
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 100.0
1ee0_A402 2-pyrone synthase; polyketide synthase, thiolase f 100.0
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 100.0
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 100.0
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 100.0
1u0m_A382 Putative polyketide synthase; type III polyketide 100.0
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 100.0
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 100.0
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 100.0
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 100.0
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 100.0
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 100.0
3v4n_A388 HMG-COA synthase; hydroxymethylglutaryl-COA syntha 100.0
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 100.0
2v4w_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 100.0
3sqz_A425 Putative hydroxymethylglutaryl-COA synthase; thiol 100.0
2p8u_A478 Hydroxymethylglutaryl-COA synthase, cytoplasmic; h 100.0
1xpm_A396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 100.0
2f82_A450 HMG-COA synthase; HMGS1, transferase; 2.10A {Brass 100.0
2wya_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 100.0
3lma_A347 Stage V sporulation protein AD (spovad); NESG, str 99.87
4e1l_A395 Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, 99.72
3ss6_A394 Acetyl-COA acetyltransferase; structural genomics, 99.71
3o04_A413 LMO2201 protein, beta-keto-acyl carrier protein sy 99.7
4dd5_A396 Acetyl-COA acetyltransferase; structural genomics, 99.7
1tqy_A424 Beta-ketoacyl synthase/acyl transferase; alpha-bet 99.69
2gqd_A437 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli 99.69
3ho9_A427 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, 99.68
1j3n_A408 3-oxoacyl-(acyl-carrier protein) synthase II; cond 99.67
3svk_A407 Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, 99.63
1e5m_A416 KAS II, beta ketoacyl acyl carrier protein synthas 99.63
3kzu_A428 3-oxoacyl-(acyl-carrier-protein) synthase II; seat 99.63
1ox0_A430 Beta ketoacyl-acyl carrier protein synthase; trans 99.62
3goa_A387 3-ketoacyl-COA thiolase; metabolism, fatty acid, p 99.6
2iwz_A438 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho 99.59
2gp6_A434 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol 99.58
1tqy_B415 Actinorhodin polyketide putative beta-ketoacyl SY; 99.58
2iik_A418 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m 99.57
1ulq_A401 Putative acetyl-COA acetyltransferase; structural 99.57
4ewg_A412 Beta-ketoacyl synthase; ssgcid, structural genomic 99.57
2vu1_A392 Acetyl-COA acetyltransferase; acyltransferase, PHB 99.57
4ddo_A451 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci 99.55
1wl4_A397 Acetyl-coenzyme A acetyltransferase 2; thiolase fo 99.55
1afw_A393 3-ketoacetyl-COA thiolase; fatty acid metabolism; 99.51
3mqd_A428 Beta-ketoacyl synthase; ssgcid, ALS collaborative 99.51
1wdk_C390 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame 99.5
2vba_A406 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop 99.5
2ib8_A395 Acetyl-COA acetyltransferase; thiolase fold, potas 99.5
2wge_A416 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta 99.49
2wu9_A442 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o 99.49
2ix4_A431 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke 99.45
2qo3_A 915 Eryaii erythromycin polyketide synthase modules 3; 99.39
2hg4_A 917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 99.36
3hhd_A 965 Fatty acid synthase; transferase, multienzyme, meg 99.27
4egv_A 520 Acetyl-COA acetyltransferase; NEW SUB-family, thio 98.99
3zen_D3089 Fatty acid synthase; transferase, mycolic acid bio 98.77
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 98.23
2pff_A 1688 Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl 97.75
2uv9_A 1878 Fatty acid synthase alpha subunits; fungal, dehydr 97.51
2uv8_A 1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 97.19
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 94.05
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 93.82
3lma_A347 Stage V sporulation protein AD (spovad); NESG, str 93.65
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 93.64
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 93.4
4ewp_A350 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans 93.37
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 92.84
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 92.77
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 92.53
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 92.44
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 92.44
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 92.39
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 92.35
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 92.23
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 92.22
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 90.77
1ulq_A401 Putative acetyl-COA acetyltransferase; structural 90.77
4e1l_A395 Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, 90.51
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 90.28
1u0m_A382 Putative polyketide synthase; type III polyketide 90.24
3svk_A407 Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, 89.89
2vu1_A392 Acetyl-COA acetyltransferase; acyltransferase, PHB 89.69
3ss6_A394 Acetyl-COA acetyltransferase; structural genomics, 89.2
4dd5_A396 Acetyl-COA acetyltransferase; structural genomics, 86.31
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 86.14
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 84.92
2iik_A418 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m 84.91
3goa_A387 3-ketoacyl-COA thiolase; metabolism, fatty acid, p 83.63
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 83.47
1wl4_A397 Acetyl-coenzyme A acetyltransferase 2; thiolase fo 81.59
2wu9_A442 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o 81.57
1wdk_C390 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame 81.08
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 80.6
1xho_A148 Chorismate mutase; southeast collaboratory for str 80.03
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} Back     alignment and structure
Probab=100.00  E-value=3.8e-55  Score=454.21  Aligned_cols=332  Identities=20%  Similarity=0.291  Sum_probs=254.9

Q ss_pred             cCCCceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHH
Q 009935          103 SRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEA  182 (522)
Q Consensus       103 ~~~~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea  182 (522)
                      .||...+|+++|.|+|+  ++|+|+++.+.++.    ++||      |.+|+||++|+++.+++.    ..+|+      
T Consensus         9 ~~~~~srI~g~g~ylP~--~~v~n~el~~~~~~----~~e~------I~~rtGI~~R~~a~~~e~----~~~la------   66 (350)
T 4ewp_A            9 ERPAASRIVAVGAYRPA--NLVPNEDLIGPIDS----SDEW------IRQRTGIVTRQRATAEET----VPVMA------   66 (350)
T ss_dssp             CCCSEEEEEEEEEECCS--CEEEHHHHTTTTTC----CHHH------HHHHHCCSEEECCCSSCC----HHHHH------
T ss_pred             cCCCCCEEEEEEEEcCC--CeEcHHHHHHHhCC----CHHH------HHhccCceEEEEcCCCCC----HHHHH------
Confidence            47888999999999999  89999999877653    6776      788999999999987763    45565      


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcC
Q 009935          183 EMVMFGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVH  261 (522)
Q Consensus       183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~  261 (522)
                          ++|+++||+++|++|+|||+||++| +++++.|+++++|+++||++ ++.+||++ +||+|++.||++|.++++++
T Consensus        67 ----~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~-~~~a~di~-~~C~g~~~aL~~A~~~i~~g  140 (350)
T 4ewp_A           67 ----VGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGAT-PAPAYDVS-AACAGYCYGVAQADALVRSG  140 (350)
T ss_dssp             ----HHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCT-TSCEEEEE-CGGGHHHHHHHHHHHHHHTT
T ss_pred             ----HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCC-CceEEEee-cchhhHHHHHHHhhhhhhCC
Confidence                9999999999999999999999996 67899999999999999998 67799998 69999999999999999999


Q ss_pred             CCCeEEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeeccCCC
Q 009935          262 PNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDT  341 (522)
Q Consensus       262 ~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~d~~  341 (522)
                      +.++||||++|.+|. +.++.+|..   ..+|||||+|++|++.+...         +....+++|+..++.+..+... 
T Consensus       141 ~~~~~Lvv~~E~~s~-~~d~~~~~~---~~lfgDGA~A~vl~~~~~~~---------~~~~~~~sdg~~~~~~~~~~~~-  206 (350)
T 4ewp_A          141 TARHVLVVGVERLSD-VVDPTDRSI---SFLLGDGAGAVIVAASDEPG---------ISPSVWGSDGERWSTISMTHSQ-  206 (350)
T ss_dssp             SCSEEEEEEEEEGGG-GCCTTCTTT---GGGBCEEEEEEEEEEESSCC---------BCCCEEEECGGGTTSEEESSCH-
T ss_pred             CccceeEeeeeecee-ccccccccc---ccccccchheeeeecccCCC---------ccceeeeecccccceeeecCCc-
Confidence            999999999999997 445667764   57999999999999876431         1223455677777666554321 


Q ss_pred             cccccccchhhHHHHHHh---------hhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcC
Q 009935          342 KRVGVSLSKDLMAVAGEA---------LKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHA  412 (522)
Q Consensus       342 g~~g~~ls~d~~~v~g~~---------l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~  412 (522)
                        ....-..+.....++.         ...++...|+.      -+.+..... .++++..+++ .+...+|||||++||
T Consensus       207 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~------v~~~a~~~~-~~~i~~~L~~-~gl~~~did~~v~Hq  276 (350)
T 4ewp_A          207 --LELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPS------VFRWAVWSM-AKVAREALDA-AGVEPEDLAAFIPHQ  276 (350)
T ss_dssp             --HHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHH------HHHHHHHTH-HHHHHHHHHH-HTCCGGGEEEEEECC
T ss_pred             --cccCcccccccccCCccccccccccccceeEehhHH------HHHHHHHhh-hHHHHHHHHh-hcCChhHhceEEecC
Confidence              0000000000000000         00011111211      112211111 1222222222 334468999999999


Q ss_pred             CChHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheeeEEe
Q 009935          413 GGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQAL  488 (522)
Q Consensus       413 ~g~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~  488 (522)
                      +|+++++.+++.||++++++.  .+++++||||||||+|+.|++++++|++++||+|+++|||+||+|+++||||.
T Consensus       277 ~~~~i~~~~~~~Lgl~~~~~~--~~~l~~~GNtssasi~~~L~~~~~~g~~~~Gd~vll~~fG~G~t~~~~vlr~P  350 (350)
T 4ewp_A          277 ANMRIIDEFAKQLKLPESVVV--ARDIADAGNTSAASIPLAMHRLLEENPELSGGLALQIGFGAGLVYGAQVVRLP  350 (350)
T ss_dssp             SCHHHHHHHHHHTTCCTTSEE--CCTHHHHCBCGGGHHHHHHHHHHHHCGGGTTSEEEEEEEETTTEEEEEEEECC
T ss_pred             CCHHHHHHHHHHcCcChHhEE--ecccccccchHHHHHHHHHHHHHHhCCCCCcCEEEEEEEchhhEeEEEEEEeC
Confidence            999999999999999999975  36899999999999999999999999999999999999999999999999983
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Back     alignment and structure
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* Back     alignment and structure
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Back     alignment and structure
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Back     alignment and structure
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Back     alignment and structure
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Back     alignment and structure
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Back     alignment and structure
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Back     alignment and structure
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Back     alignment and structure
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* Back     alignment and structure
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} Back     alignment and structure
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Back     alignment and structure
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Back     alignment and structure
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Back     alignment and structure
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Back     alignment and structure
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Back     alignment and structure
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Back     alignment and structure
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Back     alignment and structure
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Back     alignment and structure
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Back     alignment and structure
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Back     alignment and structure
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Back     alignment and structure
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Back     alignment and structure
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Back     alignment and structure
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Back     alignment and structure
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Back     alignment and structure
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Back     alignment and structure
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Back     alignment and structure
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Back     alignment and structure
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Back     alignment and structure
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Back     alignment and structure
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Back     alignment and structure
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Back     alignment and structure
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Back     alignment and structure
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Back     alignment and structure
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Back     alignment and structure
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Back     alignment and structure
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Back     alignment and structure
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Back     alignment and structure
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Back     alignment and structure
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Back     alignment and structure
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Back     alignment and structure
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Back     alignment and structure
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Back     alignment and structure
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Back     alignment and structure
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Back     alignment and structure
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Back     alignment and structure
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Back     alignment and structure
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Back     alignment and structure
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Back     alignment and structure
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Back     alignment and structure
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A* Back     alignment and structure
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 522
d1teda_372 c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacte 4e-48
d1u0ma1200 c.95.1.2 (A:2-201) Putative polyketide synthase SC 1e-35
d1bi5a1235 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Med 2e-22
d1u0ma2148 c.95.1.2 (A:202-349) Putative polyketide synthase 2e-20
d1ee0a2160 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcon 9e-20
d1bi5a2154 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (M 8e-18
d1u0ua2156 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {S 4e-17
d1u6ea2148 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa 4e-11
d1ub7a2149 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (Fa 1e-10
d1mzja2153 c.95.1.2 (A:184-336) Priming beta-ketosynthase fro 3e-10
d1hnja2143 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa 3e-09
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 372 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  168 bits (427), Expect = 4e-48
 Identities = 71/380 (18%), Positives = 131/380 (34%), Gaps = 40/380 (10%)

Query: 120 PERQCTREIFMERSEQIGCFSEENLAFQKKILERSG-------LGQHTYFPEAVLRVPP- 171
           P R   +    +R  ++     +      ++ ++S        +       +   R P  
Sbjct: 22  PRRVVNQSDAADRVAELFLDPGQRERI-PRVYQKSRITTRRMAVDPLDAKFDVFRREPAT 80

Query: 172 -NPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKL 230
               M      A  +        L+    +A +IG+LV+  S     P +   IV    L
Sbjct: 81  IRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGL 140

Query: 231 RGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSN 290
             +I+   +  MGC+A + ++  A   ++ HP   ALVV +E  ++N  F +D + +V +
Sbjct: 141 SPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNAVFADDINDVVIH 200

Query: 291 CLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSK 350
            LF  G AA+++       +    +++      +  D+     V     +          
Sbjct: 201 SLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGIVLGVNHN---------- 250

Query: 351 DLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCI 410
            +     E L   I +    V+                         I D       + I
Sbjct: 251 GITCELSENLPGYIFSGVAPVVTE---------------MLWDNGLQISDID----LWAI 291

Query: 411 HAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKG-DRT 469
           H GG  ++++  ++L +S      S   L RFGN  S SL + L     +    K     
Sbjct: 292 HPGGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTG 351

Query: 470 WQIAFGSGFKCNSAVWQALR 489
              AFG G      ++  +R
Sbjct: 352 VAFAFGPGVTVEGMLFDIIR 371
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 200 Back     information, alignment and structure
>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 235 Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 148 Back     information, alignment and structure
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Length = 160 Back     information, alignment and structure
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 154 Back     information, alignment and structure
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Length = 156 Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 148 Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Length = 149 Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Length = 153 Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Length = 143 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query522
d1teda_372 Polyketide synthase PKS18 {Mycobacterium tuberculo 100.0
d1u0ma1200 Putative polyketide synthase SCO1206 {Streptomyces 100.0
d1u6ea1184 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 99.98
d1hnja1174 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 99.97
d1mzja1181 Priming beta-ketosynthase from the r1128 polyketid 99.97
d1bi5a1235 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 99.97
d1ub7a1172 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 99.97
d1xpma1166 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap 99.95
d1hnja2143 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 99.85
d1u0ua2156 Dihydropinosylvin synthase {Scots pine (Pinus sylv 99.85
d1ee0a2160 Pyrone synthase (PyS, chalcone synthase 2) {Gerber 99.84
d1u0ma2148 Putative polyketide synthase SCO1206 {Streptomyces 99.84
d1bi5a2154 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 99.84
d1ub7a2149 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 99.83
d1mzja2153 Priming beta-ketosynthase from the r1128 polyketid 99.83
d1u6ea2148 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 99.81
d1j3na1249 Beta-ketoacyl-ACP synthase II {Thermus thermophilu 98.85
d1ulqa1273 Beta-ketoadipyl CoA thiolase {Thermus thermophilus 98.81
d1m3ka1268 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 98.76
d2gfva1250 Beta-ketoacyl-ACP synthase II {Escherichia coli [T 98.71
d1xpma2221 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap 98.67
d1ox0a1256 Beta-ketoacyl-ACP synthase II {Streptococcus pneum 98.65
d1wdkc1262 Fatty oxidation complex beta subunit (3-ketoacyl-C 98.6
d1e5ma1250 Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ 98.57
d1afwa1269 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 98.36
d1tqya1216 Actinorhodin polyketide putative beta-ketoacyl syn 98.28
d2ix4a1270 Beta-ketoacyl-ACP synthase II {Thale cress (Arabid 98.11
d2vbaa1253 Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta 98.01
d1tqyb1208 Actinorhodin polyketide putative beta-ketoacyl syn 97.93
d1u6ea2148 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 96.9
d1ub7a2149 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 96.51
d1mzja2153 Priming beta-ketosynthase from the r1128 polyketid 96.1
d1hnja2143 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 95.82
d1m3ka2124 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 93.08
d1u0ma2148 Putative polyketide synthase SCO1206 {Streptomyces 92.67
d1ulqa2125 Beta-ketoadipyl CoA thiolase {Thermus thermophilus 89.64
d1teda_372 Polyketide synthase PKS18 {Mycobacterium tuberculo 89.61
d1tqyb2194 Actinorhodin polyketide putative beta-ketoacyl syn 89.04
d1afwa2124 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 87.91
d1wdkc2128 Fatty oxidation complex beta subunit (3-ketoacyl-C 86.1
d1bi5a2154 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 80.21
d1okja1106 Hypothetical protein YeaZ {Escherichia coli [TaxId 80.02
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=6e-52  Score=431.47  Aligned_cols=349  Identities=19%  Similarity=0.227  Sum_probs=262.6

Q ss_pred             ceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCcc-----CCCCCc----cHHH
Q 009935          107 KVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVL-----RVPPNP----CMAE  177 (522)
Q Consensus       107 ~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~-----~~~~~~----~ma~  177 (522)
                      ..+|.++|+|+|+  ++|+|+|+.+.+..... ++++.+.+.||++++||++||++.+...     ..+...    .++.
T Consensus        11 ~a~I~g~g~~~P~--~~v~n~e~~~~~~~~~~-~~~~~~~~~ri~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~r~~~   87 (372)
T d1teda_          11 VAVIEGLATGTPR--RVVNQSDAADRVAELFL-DPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPATIRDRMHL   87 (372)
T ss_dssp             EEEEEEEEEECCS--CEEEHHHHHHHHHTC-----CCTTHHHHHHHTSCCSEEECSSCTTSTTHHHHTTCSSCHHHHHHH
T ss_pred             eEEEEEEEEeCCC--eEEcHHHHHHHHHhhcC-ChHHHHHHHHHHHccCCcccceeccccccchhhhhhcCCCHHHHHHH
Confidence            4789999999999  89999999998865332 2333455678999999999998743221     011111    2455


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHH
Q 009935          178 ARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQL  257 (522)
Q Consensus       178 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~l  257 (522)
                      +.|++.+|+++|+++||+++|++|+|||+||++|++++..|+++++|+++||+++++..++++++||+|++.||++|.++
T Consensus        88 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~  167 (372)
T d1teda_          88 FYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNY  167 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred             HHhHHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCchHHHHHHhhhccCCceeEeeccccCccHHHHHHHHHHHH
Confidence            67889999999999999999999999999999987889999999999999999988999999888999999999999999


Q ss_pred             HHcCCCCeEEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccc--cceeeeEEEEEecCCCCccceee
Q 009935          258 LQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRS--KYQLIHTVRTHKGADDKCYNCVF  335 (522)
Q Consensus       258 L~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a--~~~L~~~v~t~~~~d~~~~~~~~  335 (522)
                      +++++.++||||++|.++.++...++....++.++|||||+|+||++++......  .+.+.... ++...+..  +...
T Consensus       168 l~sg~~~~~LVV~~E~~s~~~~~~d~~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~  244 (372)
T d1teda_         168 VRAHPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSF-SQLLDNTE--DGIV  244 (372)
T ss_dssp             HHHSTTCEEEEEEEEECGGGCCCCSSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCEEEEEEE-EEECTTCT--TSEE
T ss_pred             HhcCCCccceeeeehhhcccccCCCcchhhhhhhhhcccceeEEeccCCcccccCCceeEEeccc-ccccCCCc--cccc
Confidence            9999999999999999987655444544445678999999999999876532211  12221111 11111111  1111


Q ss_pred             eccCCCcccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCCh
Q 009935          336 QREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGR  415 (522)
Q Consensus       336 ~~~d~~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~  415 (522)
                      ...+ +++..+..+++++....+.                          ..++++..+++ .+...+|||+|++||+|+
T Consensus       245 ~~~~-~~~~~~~~~~~~~~~~~~~--------------------------~~~~i~~~L~~-~gl~~~did~~i~Hq~~~  296 (372)
T d1teda_         245 LGVN-HNGITCELSENLPGYIFSG--------------------------VAPVVTEMLWD-NGLQISDIDLWAIHPGGP  296 (372)
T ss_dssp             EEEE-TTEEEEEECTTHHHHHHHH--------------------------HHHHHHHHHHH-TTCCGGGCSCEEECCSCH
T ss_pred             cCCC-CCcceeechHHHHHHHHHH--------------------------HHHHHHHHHHh-cCCCHHHhhhhhccCccH
Confidence            1111 1112223333443332211                          11222222222 344468999999999999


Q ss_pred             HHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCC-CEEEEEEeChhHhhhheeeEEec
Q 009935          416 AVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKG-DRTWQIAFGSGFKCNSAVWQALR  489 (522)
Q Consensus       416 ~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~G-d~VlliafGsG~~~~s~v~r~~~  489 (522)
                      ++++.+++.||++++++..|+.++.+||||+|+|+|+.|+++.++|++++| |++++++||+|++|+++|||+++
T Consensus       297 ~i~~~i~~~Lgl~~ek~~~s~~~l~~~GN~~sasip~~L~~~l~~g~~~~g~d~vll~~fG~G~s~~~~ll~~~~  371 (372)
T d1teda_         297 KIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDIIR  371 (372)
T ss_dssp             HHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEECC
T ss_pred             HHHHHHHHHcCCCHHHhhhhHHHHhccCCcHHHHHHHHHHHHHHhCCCCCCCCEEEEEEEcHHHhHHHHhheeec
Confidence            999999999999999998778889999999999999999999999998776 89999999999999999999986
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Back     information, alignment and structure
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Back     information, alignment and structure
>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Back     information, alignment and structure
>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1okja1 c.55.1.9 (A:1-106) Hypothetical protein YeaZ {Escherichia coli [TaxId: 562]} Back     information, alignment and structure